BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001806
(1010 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255538898|ref|XP_002510514.1| 5'->3' exoribonuclease, putative [Ricinus communis]
gi|223551215|gb|EEF52701.1| 5'->3' exoribonuclease, putative [Ricinus communis]
Length = 1113
Score = 1376 bits (3561), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 702/952 (73%), Positives = 774/952 (81%), Gaps = 31/952 (3%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+KD ++AAEEERLRQEFEREGRKLPPK SQVFDSN+ITPGTEFMAVL
Sbjct: 111 MNQQRSRRFRAAKDREEAAAEEERLRQEFEREGRKLPPKESSQVFDSNIITPGTEFMAVL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
SIALQYYIHLRLNNDPGW+K+KVILSDANVPGEGEHK+MSY+RLQRNLPGYDPNTRHCLY
Sbjct: 171 SIALQYYIHLRLNNDPGWKKVKVILSDANVPGEGEHKVMSYIRLQRNLPGYDPNTRHCLY 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIMLALATHE+HFSILRE+VFTPGQQDKCFLCGQ GHLAA+CEGKAKRKAGEFDE
Sbjct: 231 GLDADLIMLALATHEIHFSILREIVFTPGQQDKCFLCGQMGHLAADCEGKAKRKAGEFDE 290
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
KGDE V KKPYQFL+IWTLREYL+ E RIPNPPF+ID ECIVDDFIFMCFFVGNDFLPH
Sbjct: 291 KGDEGAVAKKPYQFLNIWTLREYLELEMRIPNPPFKIDFECIVDDFIFMCFFVGNDFLPH 350
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
MPTLEIREGAINLL+AVYKKEF A+GGYLTDG KP+L +VEHFIQAVGSYED+IFQKRAR
Sbjct: 351 MPTLEIREGAINLLLAVYKKEFTAMGGYLTDGCKPNLSKVEHFIQAVGSYEDKIFQKRAR 410
Query: 301 LHQRHAERIKREKAQAR--RGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVG 358
LHQR +ERIKREKAQ+R RGDD +P QP+SLVPV+RFHGSRLAS PSPSP+Q S
Sbjct: 411 LHQRQSERIKREKAQSRSRRGDDAQPQVQPESLVPVARFHGSRLASAPSPSPFQHSLEAA 470
Query: 359 RLD---------NGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLK 409
LD +GKG+S + HKV RLSS A++GAAIVEAENS E + ENK+E KAKLK
Sbjct: 471 DLDVRSAHFSALDGKGSSVQAHKVARLSSSASVGAAIVEAENSLEIEVHENKDELKAKLK 530
Query: 410 ELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLC 469
E+LR+KSDAFNS NPEEDK++LG+PGWKERYYEEKF+ KTPEE E+ R+DVVLRYTEGLC
Sbjct: 531 EILREKSDAFNSKNPEEDKIRLGDPGWKERYYEEKFSGKTPEELEDIRRDVVLRYTEGLC 590
Query: 470 WVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSH 529
WVMHYYYEGVCSWQWFYPYHYAPFASDLK L Q +I FELG PFKPFNQLLGVFP+ASSH
Sbjct: 591 WVMHYYYEGVCSWQWFYPYHYAPFASDLKHLGQLDIKFELGSPFKPFNQLLGVFPAASSH 650
Query: 530 ALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHT 589
ALP HYRKLM+DPNSPI DFYPTDFEVDMNGKRY+WQGIAKLPFIDE RLL EVKKIEHT
Sbjct: 651 ALPVHYRKLMSDPNSPIIDFYPTDFEVDMNGKRYAWQGIAKLPFIDEVRLLAEVKKIEHT 710
Query: 590 LTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNG 649
LTEEEARRNS M DMLFVL SH L+ SIY LD +CKQL +ERVEVKER+NPELSDGMNG
Sbjct: 711 LTEEEARRNSAMFDMLFVLSSHSLAESIYLLDNNCKQLTDRERVEVKERINPELSDGMNG 770
Query: 650 YISPCAGDPHPPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLE 709
YISPC+GD HPP+FRSPVA MEDI+ N V+CAIY+LPD HKHVTRPPAGVIFPKKIV +
Sbjct: 771 YISPCSGDTHPPIFRSPVAGMEDILDNGVICAIYRLPDPHKHVTRPPAGVIFPKKIVNVV 830
Query: 710 DLKPAPVLWHEDSGRRPHENGRHNPHGTISGRQLGEAAHRLVANSLQHMKVDRNGYGDRM 769
DLKP PVLWHEDSGR+P E+ R NP GTISGRQLGEA+HRLV NSLQ MKVD NGY + +
Sbjct: 831 DLKPDPVLWHEDSGRKPWESDRRNPPGTISGRQLGEASHRLVVNSLQ-MKVDHNGYANHL 889
Query: 770 HGSPLPYAAAPYVPPVPSYQEYGVYDQGYNRFSQPRTDSYPAGHSQSSISAAQPPYDGGY 829
H PYAA +VP SY G +D +R QPR D AG ++ + Q + GY
Sbjct: 890 HAPIPPYAATAHVPVHSSYAN-GSHDPRRDRTGQPRMDYSHAGQNR-FFNPTQYNNNHGY 947
Query: 830 SQHYAS-NTSHHPNRRYHPQYDRN--SSGEHPTHLYNPSGIHQNGGPRYPPRPMGSTSSG 886
Q YAS +H R PQY+R S+G+H +Y HQN GPRY M TS
Sbjct: 948 GQSYASPGNAHFSGSR--PQYERENRSNGQHSRQVYLQPEFHQN-GPRYLHGSMAGTSES 1004
Query: 887 ANLYPPQGGYSGYQS---PAAGSFNQWGG-----ANQSMPRGYGQGQHHQRR 930
Y Q Y GYQS P S QWG N + PRGY Q Q R
Sbjct: 1005 ---YAYQDDYDGYQSHQPPRDASHQQWGNGLPPPVNLNFPRGYDQSQQRGNR 1053
>gi|224082986|ref|XP_002306919.1| predicted protein [Populus trichocarpa]
gi|222856368|gb|EEE93915.1| predicted protein [Populus trichocarpa]
Length = 998
Score = 1329 bits (3439), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 677/884 (76%), Positives = 743/884 (84%), Gaps = 21/884 (2%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+KDA+D+AAEEERLR+EFEREGRKLPPK SQ FDSNVITPGTEFMAVL
Sbjct: 111 MNQQRSRRFRAAKDASDAAAEEERLREEFEREGRKLPPKETSQTFDSNVITPGTEFMAVL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
SIALQYYIHLRLN DPGW+KIKV+LSDANVPGEGEHK+MSY+RLQRNLPGYDPNTRHCLY
Sbjct: 171 SIALQYYIHLRLNYDPGWKKIKVVLSDANVPGEGEHKVMSYIRLQRNLPGYDPNTRHCLY 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIMLALATHEVHFSILRE+VFTPGQQDKCF+CGQ GHLAA CEGKAKRKAGEFDE
Sbjct: 231 GLDADLIMLALATHEVHFSILREIVFTPGQQDKCFICGQAGHLAAACEGKAKRKAGEFDE 290
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
KG++V VPKKPYQFL+IWTLREYL+YEFRIPNPPFEIDLE VDDFIF+CFFVGNDFLPH
Sbjct: 291 KGNDVAVPKKPYQFLNIWTLREYLEYEFRIPNPPFEIDLERTVDDFIFICFFVGNDFLPH 350
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
MPTLEIREGAINLLMAVYKKEFR LGGYLTDGSKP+L RVEHFIQAVG+YED+IFQKRAR
Sbjct: 351 MPTLEIREGAINLLMAVYKKEFRVLGGYLTDGSKPNLSRVEHFIQAVGAYEDKIFQKRAR 410
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRL 360
LHQR AERIKREK QARRGDDV+P QP+SLV V++F GSRLAS P+PSPYQ +
Sbjct: 411 LHQRQAERIKREKTQARRGDDVQPQHQPESLVAVTQFRGSRLASAPTPSPYQDDGTHSQT 470
Query: 361 DNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFN 420
+GKG+S + KV RLSS A IGAAIVEAEN E + ENKEE K KLKE LR+KSD FN
Sbjct: 471 SDGKGSSVQSRKVARLSSTANIGAAIVEAENCLEIEAHENKEELKTKLKESLREKSDVFN 530
Query: 421 SDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVC 480
S N EEDKVKLGEPGWKERYYEEKF+AK+ +E E R+DVVLRYTEGLCWVMHYYYEGVC
Sbjct: 531 SKNHEEDKVKLGEPGWKERYYEEKFSAKSLDEMEAVRRDVVLRYTEGLCWVMHYYYEGVC 590
Query: 481 SWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMT 540
SWQWFYPYHYAPFASDL DL Q NISFELG PFKPFNQLLGVFP+ASSHALP HYRKLMT
Sbjct: 591 SWQWFYPYHYAPFASDLTDLGQLNISFELGSPFKPFNQLLGVFPAASSHALPVHYRKLMT 650
Query: 541 DPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSI 600
DPNSPI DFYPTDFEVDMNGKR++WQGIAKLPFIDEARLL EV+KIEHTLTEEEARRNS+
Sbjct: 651 DPNSPIFDFYPTDFEVDMNGKRFAWQGIAKLPFIDEARLLAEVQKIEHTLTEEEARRNSM 710
Query: 601 MADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHP 660
M DMLFV SHPLS SIY LD HCKQL KERVEVKER+NPELSDGMNGY+SPCAGD HP
Sbjct: 711 MFDMLFVSSSHPLSESIYLLDNHCKQLTDKERVEVKERINPELSDGMNGYLSPCAGDTHP 770
Query: 661 PVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKPAPVLWHE 720
P+FRSPV MEDI+ N+V+C IY+LPD HKH+T PP GVIFPKKIV DLKP PVLWHE
Sbjct: 771 PIFRSPVVGMEDILANEVICVIYRLPDPHKHITYPPVGVIFPKKIVDQGDLKPDPVLWHE 830
Query: 721 DSGRRPHENGRH----NPHGTISGRQLGEAAHRLVANSLQHMKVDRNGYGDRMHGSPLPY 776
+SGRRP EN R NPHGTI+GR LGEA+HRLVANSL H+K DRNGY + MHG P PY
Sbjct: 831 ESGRRPWENDRRNPHGNPHGTIAGRHLGEASHRLVANSL-HLKGDRNGYSNHMHGPPQPY 889
Query: 777 AAAPYVPPVPSYQEYGVYDQGYNRFSQPRTDSYPAGHSQSSISAAQPPYDGGYSQHYASN 836
AAP PP+ SY G+++QG + +PR D AG+ +S+ P +D GY + YAS
Sbjct: 890 IAAPRGPPLSSYSN-GLHNQGPHGTLRPRGDYSHAGYPRSTSPRIPPHHDRGYVEPYASA 948
Query: 837 TSHHPNRRYH---PQYDRNSSGEHPTHLYNPSGIHQNGGPRYPP 877
PN Y PQY+ + +G HQ G R+PP
Sbjct: 949 G---PNPSYSGRLPQYESENRS---------AGSHQQWGGRFPP 980
>gi|359492219|ref|XP_002280236.2| PREDICTED: 5'-3' exoribonuclease 3-like [Vitis vinifera]
Length = 1065
Score = 1327 bits (3433), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 717/1023 (70%), Positives = 793/1023 (77%), Gaps = 85/1023 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+KDAAD+AAEEERLR+EFE+EGRKLPPK SQV DSNVITPGTEFM VL
Sbjct: 111 MNQQRSRRFRAAKDAADAAAEEERLREEFEKEGRKLPPKQQSQVCDSNVITPGTEFMGVL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S+ALQYYIHLRLNNDPGW+ IKVILSDANVPGEGEHKIMSY+RLQRNLPG+DPNTRHCLY
Sbjct: 171 SVALQYYIHLRLNNDPGWKSIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLY 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIMLALATHEVHFSILRE+VFTPGQQDKCF+CGQ GHLAA+CEGKAKRKAGEFDE
Sbjct: 231 GLDADLIMLALATHEVHFSILREIVFTPGQQDKCFMCGQMGHLAADCEGKAKRKAGEFDE 290
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
KG V KKPYQFL+IWTLREYL+YE RIPN PFEID E IVDDFIFMCFFVGNDFLPH
Sbjct: 291 KGQSASVVKKPYQFLNIWTLREYLEYEMRIPNLPFEIDFEHIVDDFIFMCFFVGNDFLPH 350
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
MPTLEIREGAINLLMAVYKKE RA+GGYLTD SKP+L VEHFIQAVGSYED+IFQKRAR
Sbjct: 351 MPTLEIREGAINLLMAVYKKELRAMGGYLTDSSKPNLSNVEHFIQAVGSYEDKIFQKRAR 410
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRL 360
LHQR AERIKREKAQARRGDD +P +P+ LVPVSR+HGSRLAS P+PSPYQQ E +
Sbjct: 411 LHQRQAERIKREKAQARRGDDADPQVKPEFLVPVSRYHGSRLASAPTPSPYQQHEIKSKQ 470
Query: 361 DNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFN 420
G+ GR KV R SSGAT+GAAIVEAEN ET+ +NK+E KAKLKELLR+KSD FN
Sbjct: 471 SGTSGSQGR--KVARFSSGATVGAAIVEAENDLETELHDNKDELKAKLKELLREKSDLFN 528
Query: 421 SDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVC 480
S NPEEDKVKLGE GWKERYYEEKF+ KTPEE+E R DVVL+YTEGLCWVMHYYYEGVC
Sbjct: 529 SKNPEEDKVKLGEAGWKERYYEEKFSTKTPEEQEAMRNDVVLKYTEGLCWVMHYYYEGVC 588
Query: 481 SWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMT 540
SWQWFYPYHYAPFASDLKDL Q NISFELG PFKPFNQLLGVFP+ASSHALPE YRKLMT
Sbjct: 589 SWQWFYPYHYAPFASDLKDLGQLNISFELGSPFKPFNQLLGVFPAASSHALPEEYRKLMT 648
Query: 541 DPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSI 600
DPNSPI DFYPTDFEVDMNGKR++WQGIAKLPFIDEARLL EV+KIEHTLTEEE RRNS+
Sbjct: 649 DPNSPIIDFYPTDFEVDMNGKRFAWQGIAKLPFIDEARLLAEVQKIEHTLTEEEFRRNSV 708
Query: 601 MADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHP 660
M DMLFV LSHPLS I++LD+ CK+L ER EVKE+L+P S GMNGYIS C GDP P
Sbjct: 709 MFDMLFVALSHPLSPYIFSLDDRCKKLTDNERTEVKEQLDPRASGGMNGYISLCGGDPCP 768
Query: 661 PVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKPAPVLWHE 720
P+FRSP+AS+EDIM NQV+CAIY+LPDAHKH+TRPP GV FPKKIV + DLKP PVLWHE
Sbjct: 769 PIFRSPIASLEDIMDNQVICAIYRLPDAHKHITRPPVGVTFPKKIVSVGDLKPEPVLWHE 828
Query: 721 DSGRRPHENGRHNPHGTISGRQLGEAAHRLVANSLQHMKVDRNGYGDRMHGSPLPYAAAP 780
D+GRRP ENGR N GTISGRQLGEAAHRLV NSLQ +K +RNG+GD+MH PY AAP
Sbjct: 829 DNGRRPWENGRQNLPGTISGRQLGEAAHRLVVNSLQ-VKAERNGFGDQMHAP-PPYPAAP 886
Query: 781 YVPPVPSYQEYGVYDQGYNRFSQPRTDSYPAGHSQSSISAA-QPPYDGGYSQ-HYASNTS 838
Y PP+ SY + ++Q ++R + PR D + +SS A+ + +D Y Q H +S T
Sbjct: 887 YGPPLSSYSDNRYHNQEHHRMALPRPDYSDQTYRRSSNPASVRNHFDHRYDQPHASSATG 946
Query: 839 HHPNRRYHPQYDRNSSGEHPTHLYNPSGIHQNGGPRYPPRPMGSTS--SGANLYPPQGGY 896
HH NR P H Y G HQN GP Y PR T +GA L P QGG+
Sbjct: 947 HHYNRS-------------PVHGYYQPGFHQNDGPGYHPRQEAQTHIPAGAQL-PGQGGH 992
Query: 897 S---GYQSPAAGSFNQWG------GANQSMPRGYGQGQHHQRRDGGYQQYHDQQRNYSHL 947
+ GYQS A S+++W G NQS PRG+G H
Sbjct: 993 NSHHGYQSYGASSYHEWASGWPPEGNNQSNPRGHG-----------------------HP 1029
Query: 948 QGNHQQRGNQGQHQPRGNQGQYVRDNQHRGNYGHHQQNNQQRNNQFTALDRRPKR--PPP 1005
QGN PRG YGH QQ NQ++ LDRR R PPP
Sbjct: 1030 QGN-----------PRG--------------YGH----PQQLGNQYSVLDRRANRGPPPP 1060
Query: 1006 GGD 1008
G D
Sbjct: 1061 GYD 1063
>gi|302142638|emb|CBI19841.3| unnamed protein product [Vitis vinifera]
Length = 870
Score = 1263 bits (3267), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 622/756 (82%), Positives = 672/756 (88%), Gaps = 2/756 (0%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+KDAAD+AAEEERLR+EFE+EGRKLPPK SQV DSNVITPGTEFM VL
Sbjct: 111 MNQQRSRRFRAAKDAADAAAEEERLREEFEKEGRKLPPKQQSQVCDSNVITPGTEFMGVL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S+ALQYYIHLRLNNDPGW+ IKVILSDANVPGEGEHKIMSY+RLQRNLPG+DPNTRHCLY
Sbjct: 171 SVALQYYIHLRLNNDPGWKSIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLY 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIMLALATHEVHFSILRE+VFTPGQQDKCF+CGQ GHLAA+CEGKAKRKAGEFDE
Sbjct: 231 GLDADLIMLALATHEVHFSILREIVFTPGQQDKCFMCGQMGHLAADCEGKAKRKAGEFDE 290
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
KG V KKPYQFL+IWTLREYL+YE RIPN PFEID E IVDDFIFMCFFVGNDFLPH
Sbjct: 291 KGQSASVVKKPYQFLNIWTLREYLEYEMRIPNLPFEIDFEHIVDDFIFMCFFVGNDFLPH 350
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
MPTLEIREGAINLLMAVYKKE RA+GGYLTD SKP+L VEHFIQAVGSYED+IFQKRAR
Sbjct: 351 MPTLEIREGAINLLMAVYKKELRAMGGYLTDSSKPNLSNVEHFIQAVGSYEDKIFQKRAR 410
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRL 360
LHQR AERIKREKAQARRGDD +P +P+ LVPVSR+HGSRLAS P+PSPYQQ E +
Sbjct: 411 LHQRQAERIKREKAQARRGDDADPQVKPEFLVPVSRYHGSRLASAPTPSPYQQHEIKSKQ 470
Query: 361 DNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFN 420
G+ GR KV R SSGAT+GAAIVEAEN ET+ +NK+E KAKLKELLR+KSD FN
Sbjct: 471 SGTSGSQGR--KVARFSSGATVGAAIVEAENDLETELHDNKDELKAKLKELLREKSDLFN 528
Query: 421 SDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVC 480
S NPEEDKVKLGE GWKERYYEEKF+ KTPEE+E R DVVL+YTEGLCWVMHYYYEGVC
Sbjct: 529 SKNPEEDKVKLGEAGWKERYYEEKFSTKTPEEQEAMRNDVVLKYTEGLCWVMHYYYEGVC 588
Query: 481 SWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMT 540
SWQWFYPYHYAPFASDLKDL Q NISFELG PFKPFNQLLGVFP+ASSHALPE YRKLMT
Sbjct: 589 SWQWFYPYHYAPFASDLKDLGQLNISFELGSPFKPFNQLLGVFPAASSHALPEEYRKLMT 648
Query: 541 DPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSI 600
DPNSPI DFYPTDFEVDMNGKR++WQGIAKLPFIDEARLL EV+KIEHTLTEEE RRNS+
Sbjct: 649 DPNSPIIDFYPTDFEVDMNGKRFAWQGIAKLPFIDEARLLAEVQKIEHTLTEEEFRRNSV 708
Query: 601 MADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHP 660
M DMLFV LSHPLS I++LD+ CK+L ER EVKE+L+P S GMNGYIS C GDP P
Sbjct: 709 MFDMLFVALSHPLSPYIFSLDDRCKKLTDNERTEVKEQLDPRASGGMNGYISLCGGDPCP 768
Query: 661 PVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKPAPVLWHE 720
P+FRSP+AS+EDIM NQV+CAIY+LPDAHKH+TRPP GV FPKKIV + DLKP PVLWHE
Sbjct: 769 PIFRSPIASLEDIMDNQVICAIYRLPDAHKHITRPPVGVTFPKKIVSVGDLKPEPVLWHE 828
Query: 721 DSGRRPHENGRHNPHGTISGRQLGEAAHRLVANSLQ 756
D+GRRP ENGR N GTISGRQLGEAAHRLV NSLQ
Sbjct: 829 DNGRRPWENGRQNLPGTISGRQLGEAAHRLVVNSLQ 864
>gi|449452066|ref|XP_004143781.1| PREDICTED: 5'-3' exoribonuclease 3-like [Cucumis sativus]
Length = 1101
Score = 1249 bits (3233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 666/972 (68%), Positives = 750/972 (77%), Gaps = 56/972 (5%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+KDA D+AAEE RLR+EFE+EGRKLPPK +SQVFDSNVITPGT+FMAVL
Sbjct: 111 MNQQRSRRFRAAKDAIDAAAEETRLREEFEKEGRKLPPKEESQVFDSNVITPGTDFMAVL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
SIALQYY+H+RLNNDPGW+ IKVILSDANVPGEGEHKIMSY+RLQRNLPG+DPNTRHCLY
Sbjct: 171 SIALQYYVHIRLNNDPGWKNIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLY 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIMLALATHEVHFSILRE+VFTPGQQ+KCFLCGQ GH AA+CEGKAKRK+GEFDE
Sbjct: 231 GLDADLIMLALATHEVHFSILREIVFTPGQQEKCFLCGQMGHFAADCEGKAKRKSGEFDE 290
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
K +EV + KKPYQFLHIWTLREYL+YE RIPNPPF ID+E IVDDF+FMCFFVGNDFLPH
Sbjct: 291 KVEEVTI-KKPYQFLHIWTLREYLEYEMRIPNPPFAIDIERIVDDFVFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
MPTLEIREGAINLL+AVYKKEFRALGGYLTDGSKP+L+RVEHFIQAVGSYED+IFQKRAR
Sbjct: 350 MPTLEIREGAINLLLAVYKKEFRALGGYLTDGSKPNLQRVEHFIQAVGSYEDKIFQKRAR 409
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQS---ECV 357
LHQ+ A+RIKREK Q RRGDD EP QP SLV V+RFH SRLASGP PSPY++S +
Sbjct: 410 LHQKQADRIKREKGQTRRGDDAEPQVQP-SLVAVARFHESRLASGPCPSPYERSGVGKAT 468
Query: 358 GRLD------------NGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFK 405
R +G GTS R +KV RLSSGA+IGAAIVEAENS E D +NK+E K
Sbjct: 469 SRFSGMNIKNKQSLESHGSGTSVRQNKVARLSSGASIGAAIVEAENSLEIDIDDNKKELK 528
Query: 406 AKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYT 465
+KLKE+LR+KSD FNS+ EEDK+KLG PGW+ERYY EKF+A TPEE ++ R DVVLRYT
Sbjct: 529 SKLKEVLREKSDVFNSNKSEEDKIKLGVPGWRERYYNEKFSANTPEELDDIRNDVVLRYT 588
Query: 466 EGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPS 525
EGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLK L + NISF LG PFKPFNQLLGVFP+
Sbjct: 589 EGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKGLGELNISFNLGTPFKPFNQLLGVFPA 648
Query: 526 ASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKK 585
AS+HALPE YRKLMTD NSPI DFYPTDFEVDMNGKRYSWQGIAKLPFIDE RLL EV K
Sbjct: 649 ASAHALPEQYRKLMTDQNSPIIDFYPTDFEVDMNGKRYSWQGIAKLPFIDETRLLAEVAK 708
Query: 586 IEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSD 645
+EHTLTEEEARRNSIM DMLFV SHPLS SIY+LD CKQL ++R EVKE++NPE S+
Sbjct: 709 VEHTLTEEEARRNSIMFDMLFVTSSHPLSVSIYSLDNRCKQLAERDRTEVKEKINPEHSE 768
Query: 646 GMNGYISPCAGDPHPPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKI 705
GMNGY+SPC G+ PP+FRSPV +EDI+ NQV+CAIY+LPD HKH+T+PPAGV FP KI
Sbjct: 769 GMNGYLSPCLGELCPPIFRSPVEGLEDIIDNQVICAIYRLPDVHKHITQPPAGVNFPPKI 828
Query: 706 VQLEDLKPAPVLWHEDSGRRPH---------ENGRHNPHGTISGRQLGEAAHRLVANSLQ 756
V L D+KP PVLWHEDSGRR H ENGR NP G ISGRQLG+AAHRLV NSLQ
Sbjct: 829 VSLGDMKPEPVLWHEDSGRRHHHHQDNGRYNENGRPNPPGAISGRQLGDAAHRLVVNSLQ 888
Query: 757 HMKVDRNGYGDRMHGSPLPYAAAPYV---PPVPSYQEYGVYDQGYNRFSQPRTDSYPAG- 812
DR G+ + PL + A PY+ PP S+++Y DQ + + P P G
Sbjct: 889 VRGGDRTGHNN-WQAPPLSHTAQPYIPGQPPSHSHRDYRSRDQAVD-YRMP-----PGGR 941
Query: 813 --HSQSSISAAQPPYDGGYSQ----HYASNTSHHP---NRRYHPQYDRNSSGEHPTHLYN 863
+SQ + A+ D GY Q H+ + HH N R H Q E+P Y
Sbjct: 942 PNYSQGHHNTARGHQDHGYHQPPAGHHHRDMRHHSQHYNNRAHNQVSSQHYNENPEAYYP 1001
Query: 864 PSG-IHQNGGPRYPPRPMGSTSSGANLYPP--QGGYSGYQSPAA-GSFNQW---GGANQS 916
S G PP +S +PP Q GY+ Q PA GS Q GGA Q+
Sbjct: 1002 SSASASWQGHSDVPPYHHNGPTSH---HPPTYQSGYNYNQLPAGPGSSQQQQHHGGAWQA 1058
Query: 917 MPRGYGQGQHHQ 928
P HHQ
Sbjct: 1059 PPPANHGAPHHQ 1070
>gi|356562399|ref|XP_003549459.1| PREDICTED: 5'-3' exoribonuclease 3-like [Glycine max]
Length = 1065
Score = 1248 bits (3230), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 657/986 (66%), Positives = 737/986 (74%), Gaps = 95/986 (9%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+KDAAD+AAEE RLR+EFE+EGRKLPPK +SQ FDSNVITPGTEFMAVL
Sbjct: 111 MNQQRSRRFRAAKDAADAAAEETRLREEFEKEGRKLPPKGESQTFDSNVITPGTEFMAVL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
SIALQYY+HLRLNNDPGW+ IKVILSDANVPGEGEHKIMSY+RLQRNL GYDPNTRHCLY
Sbjct: 171 SIALQYYVHLRLNNDPGWQNIKVILSDANVPGEGEHKIMSYIRLQRNLKGYDPNTRHCLY 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIMLALATHE+HFSILREVVFTPGQ DKCFLCGQ GH+AANCEGKAKRKAGEFDE
Sbjct: 231 GLDADLIMLALATHEIHFSILREVVFTPGQ-DKCFLCGQMGHMAANCEGKAKRKAGEFDE 289
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
KG E +V KKP+QFL+IWTLREYL+YE RIPNPPFEID ECIVDDFIFMCFFVGNDFLPH
Sbjct: 290 KG-EAIVAKKPFQFLNIWTLREYLEYEMRIPNPPFEIDFECIVDDFIFMCFFVGNDFLPH 348
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
MPTLEIREGAINLL+AVYKKEFR GGYLT+GS +L +VEHFIQAVGSYED+IFQKRAR
Sbjct: 349 MPTLEIREGAINLLIAVYKKEFREFGGYLTNGSTINLSKVEHFIQAVGSYEDKIFQKRAR 408
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQ-------Q 353
LHQR ERIKREKAQARRGDD EP +P+SLV VSRFHGSRLAS P+PSP+Q Q
Sbjct: 409 LHQRQTERIKREKAQARRGDDAEPQFKPESLVAVSRFHGSRLASAPNPSPFQPSGHYNSQ 468
Query: 354 SECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLR 413
R DN K RP+KV R+SSGAT+ AAIVEAEN+ E D Q+NK+E K KLKE+LR
Sbjct: 469 VSASVRKDN-KEAFERPYKVARVSSGATVAAAIVEAENNLEIDAQDNKDELKTKLKEILR 527
Query: 414 DKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMH 473
+KSD FNS N EEDK+KLGEPGWKERYY+EKF+AKTPEE E RKDVVL+YTEGLCWVMH
Sbjct: 528 EKSDVFNSKNAEEDKIKLGEPGWKERYYDEKFSAKTPEELEAIRKDVVLKYTEGLCWVMH 587
Query: 474 YYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPE 533
YYYEGVCSW WFYPYHYAPFASDLK L + +ISF+LG PFKP++QLLGVFP+ASSHALPE
Sbjct: 588 YYYEGVCSWNWFYPYHYAPFASDLKGLGELDISFKLGTPFKPYDQLLGVFPAASSHALPE 647
Query: 534 HYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEE 593
YR+LMTDP+SPI DFYP DFEVDMNGKR++WQGIAKLPFIDE RLL EV+KIE+ LT E
Sbjct: 648 PYRRLMTDPSSPIIDFYPVDFEVDMNGKRFAWQGIAKLPFIDEVRLLAEVQKIENLLTPE 707
Query: 594 EARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISP 653
E RRN+IM D+LFV HPLSA I TLD CK + ER VKE++NP+ S GMNGYIS
Sbjct: 708 EKRRNAIMFDLLFVNSCHPLSACISTLDNKCKNMPNSERAVVKEKINPKESGGMNGYISL 767
Query: 654 CAGDPHPPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKP 713
C G+P PP+FRSPVASMEDIM N V+CAIY+LPDAH H+TRPP GV FPKKIV +EDLKP
Sbjct: 768 CGGEPCPPIFRSPVASMEDIMDNHVICAIYRLPDAHTHITRPPQGVKFPKKIVGIEDLKP 827
Query: 714 APVLWHEDSGRRPH-ENGRHNPHGTISGRQLGEAAHRLVANSLQHMKVDRNGYGDRMHGS 772
PVLWHEDSGRR H ENGR NP G+ISGR+LG+AAHRL+ NSLQ KVD NGY +G
Sbjct: 828 EPVLWHEDSGRRHHAENGRKNPPGSISGRELGDAAHRLIVNSLQ-AKVDTNGYRHPHNGP 886
Query: 773 PLPYAA--------------------------------------APY--VPPVPSY---Q 789
P+ Y A APY VP P Y Q
Sbjct: 887 PISYPAPMGHHRQPLPSHGYESCPGYVAMPPPISAPSLQGRPQFAPYNAVPTAPQYGYNQ 946
Query: 790 EYGVYDQGYNR------------FSQPRTDSYPAGHSQSSISAAQPPYDGGYSQHYASNT 837
Y GYN + PR+ +Y H Q S GG S+H ++
Sbjct: 947 PYPAPPVGYNHPRQQSNPVERNDYQHPRSHNYERNHHQGS---------GGSSRHGYQSS 997
Query: 838 SHHPNRRYHPQYDRNSSGEHPTHLYNPSGIHQNGGPRYPPRPMGSTSSGANLYPPQGGYS 897
++ N R++ NS G H + + P HQN PR P G G
Sbjct: 998 GNNHNARFN-----NSHGSHHSQSFQPRA-HQNWTPRN--NPSGHRDHGQ---------- 1039
Query: 898 GYQSPAAGSFNQWGGANQSMPRGYGQ 923
Y S ++ G NQ P GY +
Sbjct: 1040 -YSSNQYSLLDRRGNRNQMPPPGYSR 1064
>gi|356553393|ref|XP_003545041.1| PREDICTED: 5'-3' exoribonuclease 3-like [Glycine max]
Length = 1075
Score = 1241 bits (3212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 669/1029 (65%), Positives = 756/1029 (73%), Gaps = 91/1029 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+KDAAD+AAEE RLR+EFE+EGRKLP K +SQ FDSNVITPGTEFMAVL
Sbjct: 111 MNQQRSRRFRAAKDAADAAAEEARLREEFEKEGRKLPSKGESQTFDSNVITPGTEFMAVL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
SIALQYY+HLRLNNDPGW+ IKVILSDANVPGEGEHKIMSY+RLQRNL GYDPNTRHCLY
Sbjct: 171 SIALQYYVHLRLNNDPGWQNIKVILSDANVPGEGEHKIMSYIRLQRNLKGYDPNTRHCLY 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIMLALATHE+HFSILRE+VFTPGQ DKCFLCGQ GH+AANCEGKAKRKAGEFDE
Sbjct: 231 GLDADLIMLALATHEIHFSILREIVFTPGQ-DKCFLCGQMGHMAANCEGKAKRKAGEFDE 289
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
KG E +V KKP+QFL+IWTLREYL+YE RI NPP EID +CIVDDFIFMCFFVGNDFLPH
Sbjct: 290 KG-EAIVTKKPFQFLNIWTLREYLEYEMRISNPPSEIDFDCIVDDFIFMCFFVGNDFLPH 348
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
MPTLEIREGAINLL+AVYKKEFR GGYLT+GS +L RVEHFIQAVGSYED+IFQKRAR
Sbjct: 349 MPTLEIREGAINLLIAVYKKEFREFGGYLTNGSTINLSRVEHFIQAVGSYEDKIFQKRAR 408
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQ-------Q 353
LHQR ERIKREKAQARRGDD EP QP+SLV VSRFHGSRLAS P+P P+Q Q
Sbjct: 409 LHQRQTERIKREKAQARRGDDAEPQFQPESLVAVSRFHGSRLASAPTPPPFQPSGHYNSQ 468
Query: 354 SECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLR 413
+ R DN K RP KV R+SSGAT+ AAIVEAEN+ E D Q+NK+E K KLKE+LR
Sbjct: 469 ASASVRKDN-KEAFERPLKVSRVSSGATVAAAIVEAENNLEIDAQDNKDELKTKLKEILR 527
Query: 414 DKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMH 473
+KSD FNS N EEDK+KLGEPGWKERYYEEKF+AKTPEE E RKDVVL+YTEGLCWVMH
Sbjct: 528 EKSDVFNSKNAEEDKIKLGEPGWKERYYEEKFSAKTPEELEAIRKDVVLKYTEGLCWVMH 587
Query: 474 YYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPE 533
YYYEGVCSW WFYPYHYAPFASDLK L + +ISF+LG PFKPF+QLLGVFP+ASSHALPE
Sbjct: 588 YYYEGVCSWNWFYPYHYAPFASDLKGLGELDISFKLGTPFKPFDQLLGVFPAASSHALPE 647
Query: 534 HYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEE 593
YR+LMTDPNSPI DFYP DFEVDMNGKR++WQGIAKLPFIDE RLL EV+KIE+ LT +
Sbjct: 648 PYRRLMTDPNSPIIDFYPIDFEVDMNGKRFAWQGIAKLPFIDEVRLLAEVQKIENLLTPD 707
Query: 594 EARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISP 653
E RRN+IM D++FV HPLSA I TLD CK + ER VKE++NP+ S GMNGYIS
Sbjct: 708 EKRRNAIMFDLIFVNSCHPLSACISTLDNKCKNMPNSERAVVKEKINPKESGGMNGYISL 767
Query: 654 CAGDPHPPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKP 713
C G+P PP+FRSP+ASMEDIM N V+CAIY+LPDAHKH+TRPP GV FPKKIV++ DLKP
Sbjct: 768 CGGEPCPPIFRSPIASMEDIMDNHVICAIYRLPDAHKHITRPPQGVKFPKKIVEIGDLKP 827
Query: 714 APVLWHEDSGRRPH-ENGRHNPHGTISGRQLGEAAHRLVANSLQHMKVDRNGYGDRMHGS 772
PVLWHEDSGRR H ENGR NP G+ISGR+LG+AAHRL+ NSLQ KVD NGY +G
Sbjct: 828 EPVLWHEDSGRRHHSENGRKNPPGSISGRELGDAAHRLIVNSLQ-AKVDTNGYRHPHNGP 886
Query: 773 PLPYAA--APYVPPVPSYQEYGVYDQGYNRFSQPRTDSYPAGHSQSSISAAQPPYDGG-Y 829
P+ Y A Y PVPSY Y+ + P S P+ + + PY+
Sbjct: 887 PISYPAPMGHYRQPVPSYG----YESSPGYVAMPPPISAPSLQGRPQFA----PYNAAPT 938
Query: 830 SQHYASN--------TSHHPNRRYHPQYDRNSSGEHPTHLYNPSGIHQNGGPRYPPRPMG 881
+Q Y N +HP R+ Y+RN +H + HQ G G
Sbjct: 939 AQQYGCNQPYPPPPVVYNHP-RQQSNSYERNDY-QHARSNHYERNHHQGSG--------G 988
Query: 882 STSSGANLYPPQGGYSGYQSPAAGSFNQWGGANQSMPRGYGQGQHHQRRDGGYQQYHDQQ 941
S+ GYQS G N H+ R + + Y
Sbjct: 989 SSR------------HGYQS---------SGNN-----------HNARFNNSHGSYGSHH 1016
Query: 942 RNYSHLQGNHQ-QRGNQGQHQPRGNQGQYVRDNQHRGNYGHHQQNNQQRNNQFTALDRRP 1000
SH N Q R +Q P G HR +YGHH +NQ++ LDRR
Sbjct: 1017 HEVSHHNQNFQPSRAHQNWTPPNNPSG-------HR-DYGHHS------SNQYSLLDRRG 1062
Query: 1001 KR---PPPG 1006
R PPPG
Sbjct: 1063 NRNPMPPPG 1071
>gi|242056911|ref|XP_002457601.1| hypothetical protein SORBIDRAFT_03g010040 [Sorghum bicolor]
gi|241929576|gb|EES02721.1| hypothetical protein SORBIDRAFT_03g010040 [Sorghum bicolor]
Length = 1066
Score = 1191 bits (3081), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 632/911 (69%), Positives = 713/911 (78%), Gaps = 33/911 (3%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+KDAAD+AAEEERLR+EFEREGRKLPPK SQ DSNVITPGTEFMAVL
Sbjct: 111 MNQQRSRRFRAAKDAADAAAEEERLREEFEREGRKLPPKQQSQTCDSNVITPGTEFMAVL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S+ALQYYIHLRLN DPGW++IKVILSDANVPGEGEHKIMSY+R QRNL G++PNTRHCLY
Sbjct: 171 SVALQYYIHLRLNYDPGWKQIKVILSDANVPGEGEHKIMSYIRGQRNLSGFNPNTRHCLY 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIMLALATHEVHFSILREVV+TPGQQDKCFLCGQ GHLAANCEGKAKRKAGEFDE
Sbjct: 231 GLDADLIMLALATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKAKRKAGEFDE 290
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
KGD +VPKKPYQFL+IWTLREYL+YEFR+PNPPF+ID E IVDDFIFMCFFVGNDFLPH
Sbjct: 291 KGD-AIVPKKPYQFLNIWTLREYLEYEFRMPNPPFKIDFERIVDDFIFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
MPTLEIREGAINLLMAVYKKEF ++GGYLTD P L RVEHFIQAVGSYED+IFQKRAR
Sbjct: 350 MPTLEIREGAINLLMAVYKKEFPSMGGYLTDSCTPDLSRVEHFIQAVGSYEDKIFQKRAR 409
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRL 360
LHQR AERIKR+KAQA+RGDD++P + D +VPV RF GSRLASG P PYQQ+ G
Sbjct: 410 LHQRQAERIKRDKAQAKRGDDLDPHVRDDLIVPVQRFQGSRLASGAVPVPYQQN---GSH 466
Query: 361 DNGKGTSGRPHKVPRLS-SGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAF 419
N K + R KV R+S SG++I AAIVEAEN E +ENKEE K+ LK+ LR+KSD F
Sbjct: 467 RNNKERNSRAPKVARVSTSGSSISAAIVEAENDLEAQERENKEELKSMLKDALREKSDIF 526
Query: 420 NSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGV 479
NSDNP+EDKVKLGEPGW+ERYYEEKF A+TPE+ EE R+DVVL+YTEGLCWVMHYYYEGV
Sbjct: 527 NSDNPDEDKVKLGEPGWRERYYEEKFGARTPEQIEEIRRDVVLKYTEGLCWVMHYYYEGV 586
Query: 480 CSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLM 539
CSWQWFYPYHYAPFASDL L Q NI FELG PFKPF+QL+GVFP+AS+HALP YR+LM
Sbjct: 587 CSWQWFYPYHYAPFASDLSGLGQLNIKFELGTPFKPFDQLMGVFPAASAHALPLQYRQLM 646
Query: 540 TDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 599
TDP+SPI DFYP DFEVDMNGKRYSWQGIAKLPFIDEARLL E+KK+EHTLT EEARRNS
Sbjct: 647 TDPHSPIIDFYPIDFEVDMNGKRYSWQGIAKLPFIDEARLLAEIKKVEHTLTPEEARRNS 706
Query: 600 IMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPH 659
IM DMLFV SHPLS IY+L+ L K+R E+KE+L+P S GMNGYI+ C+GDP
Sbjct: 707 IMFDMLFVNGSHPLSPYIYSLNSKFGHLPDKKRNEIKEKLDPSASGGMNGYITLCSGDPC 766
Query: 660 PPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKPAPVLWH 719
PP+FRSPV +EDIM NQV+C+IYKLPD HKH+ RPP GVI PKK V+ DLKP PVLWH
Sbjct: 767 PPIFRSPVDGLEDIMDNQVICSIYKLPDHHKHIARPPVGVIIPKKTVEAGDLKPPPVLWH 826
Query: 720 EDSGRRPHENG-RHNPHGTISGRQLGEAAHRLVANSLQHMKVDRNGYGDRMHGSPLPYAA 778
EDSGRRPH+N R NP G ISGRQLGEAAHRLV NSL N G HG +
Sbjct: 827 EDSGRRPHDNSNRQNPPGAISGRQLGEAAHRLVINSL-------NAQGRGQHGG----TS 875
Query: 779 APYVPPVPSYQEYGVYDQGYNRFSQPRT--DSYPAGH--SQSSISAAQPPYDGGYSQHYA 834
PY + V ++ PR + P G + S+S QPP + +
Sbjct: 876 MPYQTIMNGLHHLNVMPPVSSQGMPPRVGQSAGPPGWYVPRGSVSNGQPP------AYAS 929
Query: 835 SNTSHHPNRRYHP-QYDRNSSGEHPTHLYNPSGIHQNGGPRYPPRPMGSTSSGANLYPPQ 893
S + H+ R P QY++ + G +H Y G+H G R PP +N+YP
Sbjct: 930 SGSGHYQYERSGPSQYEQGNHGRQQSHPYARDGLHDTRG-RAPP---AYGYQQSNMYPLG 985
Query: 894 GGYSGYQSPAA 904
G G Q P+A
Sbjct: 986 PGLYG-QPPSA 995
>gi|414876883|tpg|DAA54014.1| TPA: hypothetical protein ZEAMMB73_402768 [Zea mays]
Length = 1066
Score = 1183 bits (3061), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 627/912 (68%), Positives = 707/912 (77%), Gaps = 35/912 (3%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+KDAAD+AAEEERLR+EFEREGRKLPPK SQ DSNVITPGTEFMAVL
Sbjct: 111 MNQQRSRRFRAAKDAADAAAEEERLREEFEREGRKLPPKQQSQTCDSNVITPGTEFMAVL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S+ALQYYIH RLN DPGW++IKVILSDANVPGEGEHKIMSY+R QRNL G++PNTRHCLY
Sbjct: 171 SVALQYYIHRRLNYDPGWKQIKVILSDANVPGEGEHKIMSYIRGQRNLSGFNPNTRHCLY 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIMLALATHEVHFSILREVV+TPGQQDKCFLCGQ GHLAANCEGK KRKAGEFDE
Sbjct: 231 GLDADLIMLALATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAGEFDE 290
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
KG +VPKKPYQFL+IWTLREYL+YEFR+PNPPF+ID E IVDDFIFMCFFVGNDFLPH
Sbjct: 291 KGG-AIVPKKPYQFLNIWTLREYLEYEFRMPNPPFKIDFERIVDDFIFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
MPTLEIREGAINLLMAVYKKEF ++GGYLTD P L RVEHFIQAVGSYED+IFQKRAR
Sbjct: 350 MPTLEIREGAINLLMAVYKKEFPSMGGYLTDSCTPDLSRVEHFIQAVGSYEDKIFQKRAR 409
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRL 360
LHQR AERIKREKAQA+RGDD++P + D +VP+ RF GSRLASG P PY+Q+ G
Sbjct: 410 LHQRQAERIKREKAQAKRGDDLDPHVRDDLIVPIQRFQGSRLASGAVPVPYEQN---GSH 466
Query: 361 DNGKGTSGRPHKVPRLS-SGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAF 419
+ K + R K R+S SG++I +A+VEAEN E ENKEE K+ LK+ LR+KSD F
Sbjct: 467 KDNKERNSRARKAARVSTSGSSIASALVEAENDLEAQECENKEELKSMLKDALREKSDIF 526
Query: 420 NSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGV 479
NSDNPEEDKVKLGEPGW+ERYYEEKF A+TPE+ EE R+DVVL+YTEGLCWVMHYYYEGV
Sbjct: 527 NSDNPEEDKVKLGEPGWRERYYEEKFGARTPEQIEEIRRDVVLKYTEGLCWVMHYYYEGV 586
Query: 480 CSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLM 539
CSWQWFYPYHYAPFASDL L Q NI FELG PFKPF+QL+GVFP+AS+HALP YR+LM
Sbjct: 587 CSWQWFYPYHYAPFASDLSGLGQLNIKFELGTPFKPFDQLMGVFPAASAHALPLQYRRLM 646
Query: 540 TDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 599
TDPNSPI DFYPTDFEVDMNGKRYSWQGIAKLPFIDE RLL E+KK+EHTLT EEARRNS
Sbjct: 647 TDPNSPIIDFYPTDFEVDMNGKRYSWQGIAKLPFIDEDRLLAEIKKVEHTLTPEEARRNS 706
Query: 600 IMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPH 659
IM DMLFV SHPLS IY+L+ L K R E+KE+L+P S GMNGYI+ C+GDP
Sbjct: 707 IMCDMLFVNGSHPLSPYIYSLNSKFGHLPDKRRNEIKEKLDPSASGGMNGYITLCSGDPC 766
Query: 660 PPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKPAPVLWH 719
PP+FRSPV +EDIM NQV+C+IY LPD HKH+ +PP GVI PKKIV+ DLKP PVLWH
Sbjct: 767 PPIFRSPVDGLEDIMDNQVICSIYNLPDHHKHIAQPPVGVIMPKKIVEAGDLKPPPVLWH 826
Query: 720 EDSGRRPHENG-RHNPHGTISGRQLGEAAHRLVANSLQHMKVDRNGYGDRMH-GSPLPYA 777
EDSGRRPH+N R NP G ISGRQLGEAAHRLV NSL N G H G+ +PY
Sbjct: 827 EDSGRRPHDNSNRQNPSGAISGRQLGEAAHRLVINSL-------NAQGRGQHSGTSMPYR 879
Query: 778 AAPYVPPVPSYQEYGVYDQGYNRFSQPRT--DSYPAGH--SQSSISAAQPP-YDGGYSQH 832
+ V N+ +P+ + P G + S+S QPP Y S H
Sbjct: 880 TI-----MNGLHHLDVASPVSNQGMRPQVGQSAGPPGWYVPRGSVSNGQPPAYASSGSGH 934
Query: 833 YASNTSHHPNRRYHPQYDRNSSGEHPTHLYNPSGIHQNGGPRYPPRPMGSTSSGANLYPP 892
Y +S H QY++ + G +H Y G H G R PP +N+YP
Sbjct: 935 YQYESSG------HSQYEQGNHGRQQSHPYARDGFHDTRG-RVPP---AYGYQQSNMYPS 984
Query: 893 QGGYSGYQSPAA 904
G G Q P+A
Sbjct: 985 GPGLYG-QPPSA 995
>gi|224065931|ref|XP_002301985.1| predicted protein [Populus trichocarpa]
gi|222843711|gb|EEE81258.1| predicted protein [Populus trichocarpa]
Length = 851
Score = 1172 bits (3033), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 594/730 (81%), Positives = 639/730 (87%), Gaps = 12/730 (1%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+KDAAD+AAEEERLR+EFEREGRKLPPK SQ FDSNVITPGTEFMAVL
Sbjct: 112 MNQQRSRRFRAAKDAADAAAEEERLREEFEREGRKLPPKESSQTFDSNVITPGTEFMAVL 171
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
LN DPGW+KIK ILSDANVPGEGEHKIMSY+RLQ NLPGY+PNTRHCLY
Sbjct: 172 -----------LNYDPGWKKIKAILSDANVPGEGEHKIMSYIRLQSNLPGYNPNTRHCLY 220
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML+LATHEV FSILRE+VFTPGQQDKCFLCGQ GHLAA+CEGKAKRKAGEFDE
Sbjct: 221 GLDADLIMLSLATHEVLFSILREIVFTPGQQDKCFLCGQMGHLAADCEGKAKRKAGEFDE 280
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
KG++V VPKKPYQFL+IW LREYL+YEFRIPNPPFEIDLE IVDDFIF+CFFVGNDFLPH
Sbjct: 281 KGNDVAVPKKPYQFLNIWILREYLEYEFRIPNPPFEIDLERIVDDFIFICFFVGNDFLPH 340
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
MPTLEIREGAINLLMAVYKKEFR L GYLTDGSKP+L RVEHFIQAVGSYED+IFQKRAR
Sbjct: 341 MPTLEIREGAINLLMAVYKKEFRVLDGYLTDGSKPNLNRVEHFIQAVGSYEDKIFQKRAR 400
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRL 360
LHQR AERIKREKAQARRGDD EP QP+SLV V+RFHGSRLAS P+PSPYQ +
Sbjct: 401 LHQRQAERIKREKAQARRGDDAEPQNQPESLVAVARFHGSRLASAPTPSPYQDDGTHSQT 460
Query: 361 DNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFN 420
+GK +S R HKV RLSS A IGAAIVEAENS E + EN+EE K KLKELLR+KSD FN
Sbjct: 461 SDGKRSSVRRHKVARLSSTANIGAAIVEAENSLEIEVHENQEELKTKLKELLREKSDVFN 520
Query: 421 SDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDV-VLRYTEGLCWVMHYYYEGV 479
S N EDKVKLGEPGWKERYYE+KF+AKT EE E+ R+DV VLRYTEGLCWVMHYYYEGV
Sbjct: 521 SKNHGEDKVKLGEPGWKERYYEQKFSAKTLEEMEDIRRDVKVLRYTEGLCWVMHYYYEGV 580
Query: 480 CSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLM 539
CSWQWFYPYHYAPFASDLKDL Q +ISFELG PFKPFNQLLGVFP+ASSHALP HYRKLM
Sbjct: 581 CSWQWFYPYHYAPFASDLKDLGQLDISFELGSPFKPFNQLLGVFPAASSHALPVHYRKLM 640
Query: 540 TDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 599
TDP+SP DFYPTDFEVDMNGKRY+WQGIAKLP IDE+RLL EV+KIEHTLTEEEARRNS
Sbjct: 641 TDPSSPFIDFYPTDFEVDMNGKRYAWQGIAKLPLIDESRLLAEVQKIEHTLTEEEARRNS 700
Query: 600 IMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPH 659
+M DM FV SH LS SI LD HCKQL KER EVKER+NPELSDGMNGY+SPCAGD H
Sbjct: 701 MMFDMHFVSSSHSLSESINLLDNHCKQLTDKERAEVKERINPELSDGMNGYLSPCAGDTH 760
Query: 660 PPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKPAPVLWH 719
PP+FRSPV SMEDI+ N+V+C IY+LPD H H+TRPPAGVIFPKK V DLKP P+LWH
Sbjct: 761 PPIFRSPVVSMEDILANEVICVIYRLPDPHTHITRPPAGVIFPKKTVDQGDLKPEPILWH 820
Query: 720 EDSGRRPHEN 729
EDSGRRP EN
Sbjct: 821 EDSGRRPWEN 830
>gi|115441335|ref|NP_001044947.1| Os01g0872700 [Oryza sativa Japonica Group]
gi|56785082|dbj|BAD82721.1| putative 5'-3' exoribonuclease (XRN3) [Oryza sativa Japonica Group]
gi|113534478|dbj|BAF06861.1| Os01g0872700 [Oryza sativa Japonica Group]
gi|215713440|dbj|BAG94577.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1068
Score = 1172 bits (3032), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 651/1025 (63%), Positives = 733/1025 (71%), Gaps = 85/1025 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+KDAAD+AAEEERLR+EFEREGRKLPPK SQ DSNVITPGTEFMAVL
Sbjct: 111 MNQQRSRRFRAAKDAADAAAEEERLREEFEREGRKLPPKQQSQTCDSNVITPGTEFMAVL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
SIALQYYIHLRLN DPGW+++KVILSDANVPGEGEHKIMSY+R QRNLPG++PNTRHCLY
Sbjct: 171 SIALQYYIHLRLNYDPGWKQVKVILSDANVPGEGEHKIMSYIRGQRNLPGFNPNTRHCLY 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIMLALATHEVHFSILREVV+TPGQQDKCFLCGQ GHLAANCEGK KRKAGEFDE
Sbjct: 231 GLDADLIMLALATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAGEFDE 290
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
KG E +VPKKPYQFL+IWTLREYL+YEFR+ NPPF ID E IVDDFIFMCFFVGNDFLPH
Sbjct: 291 KG-EAIVPKKPYQFLNIWTLREYLEYEFRMQNPPFPIDFERIVDDFIFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
MPTLEIREGAINLLMAVYKKEF ++GGYLTD P L +VEHFIQAVGSYED+IFQKRAR
Sbjct: 350 MPTLEIREGAINLLMAVYKKEFPSMGGYLTDACTPDLNKVEHFIQAVGSYEDKIFQKRAR 409
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRL 360
LHQR AERIKREKAQA+RGDD++P + D +VPV+RF GSRLASGP PSPY+Q+ G
Sbjct: 410 LHQRQAERIKREKAQAKRGDDLDPHVRDDLIVPVARFQGSRLASGPVPSPYEQN---GSD 466
Query: 361 DNGKGTSGRPHKVPRLSSGATIGAAI-VEAENSFETDPQENKEEFKAKLKELLRDKSDAF 419
N G + R K R+SS + AA VEAEN E +ENKE+ K LK+ LR+KSD F
Sbjct: 467 KNNGGKNSRARKAARVSSSGSSIAAAIVEAENDLEAQERENKEDLKTMLKDALREKSDVF 526
Query: 420 NSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGV 479
NS+NPEEDK+KLGEPGW+ERYYEEKF A+TP + EE R+DVVL+YTEGLCWVMHYYYEGV
Sbjct: 527 NSENPEEDKIKLGEPGWRERYYEEKFGARTPGQIEEIRRDVVLKYTEGLCWVMHYYYEGV 586
Query: 480 CSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLM 539
CSWQWFYPYHYAPFASDL L Q NI+FELG PFKPF+QL+GVFP+ASSHALP YR+LM
Sbjct: 587 CSWQWFYPYHYAPFASDLSGLGQLNITFELGSPFKPFDQLMGVFPAASSHALPVQYRQLM 646
Query: 540 TDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 599
TD NSPI DFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLL E+KK+EHTLT EEARRNS
Sbjct: 647 TDANSPIIDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLAEIKKVEHTLTPEEARRNS 706
Query: 600 IMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPH 659
IM +MLFV SHPLS IY+L+ L +ER E+KE+++P S GMNGYIS C+GDP
Sbjct: 707 IMFNMLFVNGSHPLSPYIYSLNSKFGHLPDRERNEIKEKIDPSSSGGMNGYISLCSGDPC 766
Query: 660 PPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKPAPVLWH 719
PPVFRSPV +EDIM NQV+C IYKLPD+HKH+ RPP GVI PKK V+ DLKP PVLWH
Sbjct: 767 PPVFRSPVDGLEDIMDNQVICTIYKLPDSHKHIARPPVGVIIPKKTVEATDLKPPPVLWH 826
Query: 720 EDSGRRPHEN---------GRHNPHGTISGRQLGEAAHRLVANSLQ-----HMKVDRNGY 765
EDSGRRPH+N R NP G ISGRQLGEAAHRLV NSL Y
Sbjct: 827 EDSGRRPHDNNNRRPYENSNRQNPAGAISGRQLGEAAHRLVVNSLNARSGGQYNTPSMPY 886
Query: 766 GDRMHGSPLPYAAAPYVPPVPSYQEYGVYDQGYNRFSQPRTDSYPAGHSQSSISAAQPPY 825
M+G P P +PP R QP P H + Q P
Sbjct: 887 QTIMNGMPYPNG----IPP---------------RMEQPA----PGWHVPGDLPNGQVP- 922
Query: 826 DGGYSQHYASNTSHHPNRRYHP-QYDRNSSGEHPTHLYNPSGIHQNGGPRYPPRPMGSTS 884
YAS++ H+ N R P QY R++ G +P N H + R PP
Sbjct: 923 -----PAYASSSGHYQNDRSGPSQYGRDNHGRYPYARDN----HHDSRGRVPP----YHQ 969
Query: 885 SGANLYPPQGGYSGYQSPAAGSFNQWGGANQSMPRGYGQGQHHQRRDGGYQQYHDQQRNY 944
SG N Y + +P+AG G Q P G G+ +Q Y Q+
Sbjct: 970 SGGN------SYQSHSAPSAGP----GRYAQPPPYAGGYGRSYQ--PAPYGGGQQWQQQQ 1017
Query: 945 SHLQGNHQQRGNQGQHQPRGNQGQYVRDNQHRGNYGHHQQNNQQRNNQFTALDRRPKRPP 1004
G++ G P G R N QQ N++ LDR R P
Sbjct: 1018 QQPYGSYAGSG------PYGGGAPPARPNSR----------PQQSQNRYNTLDRNSNRRP 1061
Query: 1005 PGGDG 1009
P G G
Sbjct: 1062 PPGHG 1066
>gi|125528546|gb|EAY76660.1| hypothetical protein OsI_04616 [Oryza sativa Indica Group]
Length = 1068
Score = 1172 bits (3031), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 650/1025 (63%), Positives = 733/1025 (71%), Gaps = 85/1025 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+KDAAD+AAEEERLR+EFEREGRKLPPK SQ DSNVITPGTEFMAVL
Sbjct: 111 MNQQRSRRFRAAKDAADAAAEEERLREEFEREGRKLPPKQQSQTCDSNVITPGTEFMAVL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
SIALQYYIHLRLN DPGW+++KVILSDANVPGEGEHKIMSY+R QRNLPG++PNTRHCLY
Sbjct: 171 SIALQYYIHLRLNYDPGWKQVKVILSDANVPGEGEHKIMSYIRGQRNLPGFNPNTRHCLY 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIMLALATHEVHFSILREVV+TPGQQDKCFLCGQ GHLAANCEGK KRKAGEFDE
Sbjct: 231 GLDADLIMLALATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAGEFDE 290
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
KG E +VPKKPYQFL+IWTLREYL+YEFR+ NPPF ID E IVDDFIFMCFFVGNDFLPH
Sbjct: 291 KG-EAIVPKKPYQFLNIWTLREYLEYEFRMQNPPFPIDFERIVDDFIFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
MPTLEIREGAINLLMAVYKKEF ++GGYLTD P L +VEHFIQAVGSYED+IFQKRAR
Sbjct: 350 MPTLEIREGAINLLMAVYKKEFPSMGGYLTDACTPDLNKVEHFIQAVGSYEDKIFQKRAR 409
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRL 360
LHQR AERIKREKAQA+RGDD++P + D +VPV+RF GSRLASGP+PSPY+Q+ G
Sbjct: 410 LHQRQAERIKREKAQAKRGDDLDPHVRDDLIVPVARFQGSRLASGPAPSPYEQN---GSD 466
Query: 361 DNGKGTSGRPHKVPRLSSGATIGAAI-VEAENSFETDPQENKEEFKAKLKELLRDKSDAF 419
N G + R K R+SS + AA VEAEN E +ENKE+ K LK+ LR+KSD F
Sbjct: 467 KNNGGKNSRARKAARVSSSGSSIAAAIVEAENDLEAQERENKEDLKTMLKDALREKSDVF 526
Query: 420 NSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGV 479
NS+NPEEDK+KLGEPGW+ERYYEEKF A+TP + EE R+DVVL+YTEGLCWVMHYYYEGV
Sbjct: 527 NSENPEEDKIKLGEPGWRERYYEEKFGARTPGQIEEIRRDVVLKYTEGLCWVMHYYYEGV 586
Query: 480 CSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLM 539
CSWQWFYPYHYAPFASDL L Q NI+FELG PFKPF+QL+GVFP+ASSHALP YR+LM
Sbjct: 587 CSWQWFYPYHYAPFASDLSGLGQLNITFELGSPFKPFDQLMGVFPAASSHALPVQYRQLM 646
Query: 540 TDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 599
TD NSPI DFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLL E+KK+EHTLT EEARRNS
Sbjct: 647 TDANSPIIDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLAEIKKVEHTLTPEEARRNS 706
Query: 600 IMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPH 659
IM +MLFV SHPLS IY+L+ L +ER E+KE+++P S GMNGYIS C+GDP
Sbjct: 707 IMFNMLFVNGSHPLSPYIYSLNSKFGHLPDRERNEIKEKIDPSSSGGMNGYISLCSGDPC 766
Query: 660 PPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKPAPVLWH 719
PPVFRSPV +EDIM NQV+C IYKLPD+HKH+ RPP GVI PKK V+ DLKP PVLWH
Sbjct: 767 PPVFRSPVDGLEDIMDNQVICTIYKLPDSHKHIARPPVGVIIPKKTVEATDLKPPPVLWH 826
Query: 720 EDSGRRPHEN---------GRHNPHGTISGRQLGEAAHRLVANSLQ-----HMKVDRNGY 765
EDSGRRPH+N R NP G ISGRQLGEAAHRLV NSL Y
Sbjct: 827 EDSGRRPHDNNNRRPYENSNRQNPAGAISGRQLGEAAHRLVVNSLNARSGGQYNTPSMPY 886
Query: 766 GDRMHGSPLPYAAAPYVPPVPSYQEYGVYDQGYNRFSQPRTDSYPAGHSQSSISAAQPPY 825
M+G P P +PP R QP P H + Q P
Sbjct: 887 QTIMNGMPYPNG----IPP---------------RMEQPA----PGWHVPGDLPNGQVP- 922
Query: 826 DGGYSQHYASNTSHHPNRRYHP-QYDRNSSGEHPTHLYNPSGIHQNGGPRYPPRPMGSTS 884
YAS++ H+ R P QY R++ G +P N H + R PP
Sbjct: 923 -----PAYASSSGHYQKDRSGPSQYGRDNHGRYPYARDN----HHDSRGRVPP----YHQ 969
Query: 885 SGANLYPPQGGYSGYQSPAAGSFNQWGGANQSMPRGYGQGQHHQRRDGGYQQYHDQQRNY 944
SG N Y + +P+AG G Q P G G+ +Q Y Q+
Sbjct: 970 SGGN------SYQSHSAPSAGP----GQYAQPPPYAGGYGRSYQ--PAPYGGGQQWQQQQ 1017
Query: 945 SHLQGNHQQRGNQGQHQPRGNQGQYVRDNQHRGNYGHHQQNNQQRNNQFTALDRRPKRPP 1004
G++ G P G R N QQ N++ LDR R P
Sbjct: 1018 QQPYGSYAGSG------PYGGGAPPARPNSR----------PQQSQNRYNTLDRNSNRRP 1061
Query: 1005 PGGDG 1009
P G G
Sbjct: 1062 PPGHG 1066
>gi|19571126|dbj|BAB86550.1| putative 5-3 exoribonuclease [Oryza sativa Japonica Group]
Length = 1064
Score = 1166 bits (3017), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 649/1021 (63%), Positives = 731/1021 (71%), Gaps = 81/1021 (7%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+KDAAD+AAEEERLR+EFEREGRKLPPK SQ DSNVITPGTEFMAVL
Sbjct: 111 MNQQRSRRFRAAKDAADAAAEEERLREEFEREGRKLPPKQQSQTCDSNVITPGTEFMAVL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
SIALQYYIHLRLN DPGW+++KVILSDANVPGEGEHKIMSY+R QRNLPG++PNTRHCLY
Sbjct: 171 SIALQYYIHLRLNYDPGWKQVKVILSDANVPGEGEHKIMSYIRGQRNLPGFNPNTRHCLY 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIMLALATHEVHFSILREVV+TPGQQDKCFLCGQ GHLAANCEGK KRKAGEFDE
Sbjct: 231 GLDADLIMLALATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAGEFDE 290
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
KG E +VPKKPYQFL+IWTLREYL+YEFR+ NPPF ID E IVDDFIFMCFFVGNDFLPH
Sbjct: 291 KG-EAIVPKKPYQFLNIWTLREYLEYEFRMQNPPFPIDFERIVDDFIFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
MPTLEIREGAINLLMAVYKKEF ++GGYLTD P L +VEHFIQAVGSYED+IFQKRAR
Sbjct: 350 MPTLEIREGAINLLMAVYKKEFPSMGGYLTDACTPDLNKVEHFIQAVGSYEDKIFQKRAR 409
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRL 360
LHQR AERIKREKAQA+RGDD++P + D +VPV+RF GSRLASGP PSPY+Q+ G
Sbjct: 410 LHQRQAERIKREKAQAKRGDDLDPHVRDDLIVPVARFQGSRLASGPVPSPYEQN---GSD 466
Query: 361 DNGKGTSGRPHKVPRLSSGATIGAAI-VEAENSFETDPQENKEEFKAKLKELLRDKSDAF 419
N G + R K R+SS + AA VEAEN E +ENKE+ K LK+ LR+KSD F
Sbjct: 467 KNNGGKNSRARKAARVSSSGSSIAAAIVEAENDLEAQERENKEDLKTMLKDALREKSDVF 526
Query: 420 NSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGV 479
NS+NPEEDK+KLGEPGW+ERYYEEKF A+TP + EE R+DVVL+YTEGLCWVMHYYYEGV
Sbjct: 527 NSENPEEDKIKLGEPGWRERYYEEKFGARTPGQIEEIRRDVVLKYTEGLCWVMHYYYEGV 586
Query: 480 CSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLM 539
CSWQWFYPYHYAPFASDL L Q NI+FELG PFKPF+QL+GVFP+ASSHALP YR+LM
Sbjct: 587 CSWQWFYPYHYAPFASDLSGLGQLNITFELGSPFKPFDQLMGVFPAASSHALPVQYRQLM 646
Query: 540 TDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 599
TD NSPI DFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLL E+KK+EHTLT EEARRNS
Sbjct: 647 TDANSPIIDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLAEIKKVEHTLTPEEARRNS 706
Query: 600 IMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPH 659
IM +MLFV SHPLS IY+L+ L +ER E+KE+++P S GMNGYIS C+GDP
Sbjct: 707 IMFNMLFVNGSHPLSPYIYSLNSKFGHLPDRERNEIKEKIDPSSSGGMNGYISLCSGDPC 766
Query: 660 PPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKPAPVLWH 719
PPVFRSPV +EDIM NQV+C IYKLPD+HKH+ RPP GVI PKK V+ DLKP PVLWH
Sbjct: 767 PPVFRSPVDGLEDIMDNQVICTIYKLPDSHKHIARPPVGVIIPKKTVEATDLKPPPVLWH 826
Query: 720 EDSGRRPHEN-----GRHNPHGTISGRQLGEAAHRLVANSLQ-----HMKVDRNGYGDRM 769
EDSGRR + N R NP G ISGRQLGEAAHRLV NSL Y M
Sbjct: 827 EDSGRRENPNLLVKLFRQNPAGAISGRQLGEAAHRLVVNSLNARSGGQYNTPSMPYQTIM 886
Query: 770 HGSPLPYAAAPYVPPVPSYQEYGVYDQGYNRFSQPRTDSYPAGHSQSSISAAQPPYDGGY 829
+G P P +PP R QP P H + Q P
Sbjct: 887 NGMPYPNG----IPP---------------RMEQPA----PGWHVPGDLPNGQVP----- 918
Query: 830 SQHYASNTSHHPNRRYHP-QYDRNSSGEHPTHLYNPSGIHQNGGPRYPPRPMGSTSSGAN 888
YAS++ H+ N R P QY R++ G +P N H + R PP SG N
Sbjct: 919 -PAYASSSGHYQNDRSGPSQYGRDNHGRYPYARDN----HHDSRGRVPP----YHQSGGN 969
Query: 889 LYPPQGGYSGYQSPAAGSFNQWGGANQSMPRGYGQGQHHQRRDGGYQQYHDQQRNYSHLQ 948
Y + +P+AG G Q P G G+ +Q Y Q+
Sbjct: 970 ------SYQSHSAPSAGP----GRYAQPPPYAGGYGRSYQ--PAPYGGGQQWQQQQQQPY 1017
Query: 949 GNHQQRGNQGQHQPRGNQGQYVRDNQHRGNYGHHQQNNQQRNNQFTALDRRPKRPPPGGD 1008
G++ G P G R N QQ N++ LDR R PP G
Sbjct: 1018 GSYAGSG------PYGGGAPPARPNSR----------PQQSQNRYNTLDRNSNRRPPPGH 1061
Query: 1009 G 1009
G
Sbjct: 1062 G 1062
>gi|18410905|ref|NP_565114.1| 5'-3' exoribonuclease 3 [Arabidopsis thaliana]
gi|75262832|sp|Q9FQ03.1|XRN3_ARATH RecName: Full=5'-3' exoribonuclease 3; AltName: Full=Protein
EXORIBONUCLEASE 3
gi|11875628|gb|AAG40732.1|AF286719_1 XRN3 [Arabidopsis thaliana]
gi|332197621|gb|AEE35742.1| 5'-3' exoribonuclease 3 [Arabidopsis thaliana]
Length = 1020
Score = 1154 bits (2985), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 621/973 (63%), Positives = 712/973 (73%), Gaps = 92/973 (9%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR++KDA+D+AAEEERLR+EFEREGR+LPPK DSQVFDSNVITPGTEFM VL
Sbjct: 111 MNQQRSRRFRSAKDASDAAAEEERLREEFEREGRRLPPKVDSQVFDSNVITPGTEFMGVL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
SIALQYY+HLRLN+D GW+ IKVILSDANVPGEGEHKIMSY+RLQRNLPG+DPNTRHCLY
Sbjct: 171 SIALQYYVHLRLNHDVGWKNIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLY 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML LATHEVHFSILREVV+TPGQQ++CFLCGQ GH A+NCEGK K++AGE DE
Sbjct: 231 GLDADLIMLGLATHEVHFSILREVVYTPGQQERCFLCGQMGHFASNCEGKPKKRAGESDE 290
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
KGD KKPYQFLHIW LREYL+ E RIPNPPFEIDLE IVDDFIF+CFFVGNDFLPH
Sbjct: 291 KGDGNDFVKKPYQFLHIWVLREYLELEMRIPNPPFEIDLERIVDDFIFICFFVGNDFLPH 350
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
MPTLEIREGAINLLMAVYKKEFR+ GYLTDG KP+L+RVE FIQAVGS+ED+IFQKRA
Sbjct: 351 MPTLEIREGAINLLMAVYKKEFRSFDGYLTDGCKPNLKRVEQFIQAVGSFEDKIFQKRAM 410
Query: 301 LHQRHAERIKREKA--QARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVG 358
HQR AER+KR+KA +R DD P QPD LVPV+RF GSRLAS P+PSP+Q ++
Sbjct: 411 QHQRQAERVKRDKAGKATKRMDDEAPTVQPD-LVPVARFSGSRLASAPTPSPFQSND--- 466
Query: 359 RLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDA 418
G S KV RLS G+++GAAIV+ ENS E+D +ENKEE K KLKEL+R+KSDA
Sbjct: 467 ------GRSAPHQKVRRLSPGSSVGAAIVDVENSLESDERENKEELKTKLKELIREKSDA 520
Query: 419 FNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEG 478
FNSD EEDKVKLG+PGW+ERYYEEKF+ TPEE E RKDVVL+YTEGLCWVMHYY EG
Sbjct: 521 FNSDTTEEDKVKLGQPGWRERYYEEKFSVVTPEEMERVRKDVVLKYTEGLCWVMHYYMEG 580
Query: 479 VCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKL 538
VCSWQWFYPYHYAPFASDLKDL + +I FELG PFKPFNQLLGVFP+ASSHALPE YR L
Sbjct: 581 VCSWQWFYPYHYAPFASDLKDLGEMDIKFELGTPFKPFNQLLGVFPAASSHALPERYRTL 640
Query: 539 MTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
MTDPNSPI DFYPTDFEVDMNGKR+SWQGIAKLPFIDE RLL+ V ++E TLT+EE RRN
Sbjct: 641 MTDPNSPIIDFYPTDFEVDMNGKRFSWQGIAKLPFIDERRLLEAVSEVEFTLTDEEKRRN 700
Query: 599 SIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDP 658
S M DMLF+ SH L+ +++LD HC+QL +ERV+ K ++ P+LSDGMNGY++PC+G+
Sbjct: 701 SRMCDMLFIATSHRLAELVFSLDNHCRQLSARERVDFKVKIKPKLSDGMNGYLTPCSGET 760
Query: 659 HPPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKPAPVLW 718
HPPVFRSP+ MEDI+ NQV+C IY+LPDAH+H+TRPP GVIFPKK V + DLKP P LW
Sbjct: 761 HPPVFRSPMEGMEDILTNQVICCIYRLPDAHEHITRPPPGVIFPKKTVDIGDLKPPPALW 820
Query: 719 HEDSGRRP--------------HENGRHNPHGTISGRQLGEAAHRLVANSLQHMKVDRNG 764
HED+GRRP + GR NP G++SGR LG AAHRLV+NSLQ M DR
Sbjct: 821 HEDNGRRPMHNNHGMHNNHGMHNNQGRQNPPGSVSGRHLGNAAHRLVSNSLQ-MGTDRYQ 879
Query: 765 YGDRMHGSPLPYAAAPYVPPVPSYQEYGVYDQGYNRFSQPRTDSYPAGHSQSSISAAQPP 824
+ Y YVPP+P YQ G PP
Sbjct: 880 TPTDVPAPGYGYNPPQYVPPIP-YQHGGY---------------------------MAPP 911
Query: 825 YDGGYSQHYASNTSHHPNRRYHPQYDRNSSGEHPTHLYNPSGIHQNGGPRYPPRPMGSTS 884
GY+Q P +N G P PSG R+P P S S
Sbjct: 912 GAQGYAQ---------------PAPYQNRGGYQPR---GPSG-------RFPSEPYQSQS 946
Query: 885 SGANLYPPQGGYS--GYQSPAAGSFNQWGGANQSMPRGYGQGQHHQRRDG---------G 933
GGYS ++ GG+ Q+ PRGY GQHH ++ G G
Sbjct: 947 REGQHASRGGGYSGNHQNQHQQQQWHGQGGSEQNNPRGY-NGQHHHQQGGDHDRRGRGRG 1005
Query: 934 YQQYHDQQRNYSH 946
+HDQ N H
Sbjct: 1006 SHHHHDQGGNPRH 1018
>gi|357126119|ref|XP_003564736.1| PREDICTED: 5'-3' exoribonuclease 3-like [Brachypodium distachyon]
Length = 1061
Score = 1144 bits (2959), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 633/1021 (61%), Positives = 724/1021 (70%), Gaps = 84/1021 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+KDAAD+AAEEE+LR+EFEREGRKLPPK SQ DSNVITPGTEFMAVL
Sbjct: 111 MNQQRSRRFRAAKDAADAAAEEEKLREEFEREGRKLPPKLQSQTCDSNVITPGTEFMAVL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S+ALQYYIHLRLN DPGW++IKVILSDANVPGEGEHK+MSY+R QRNLPG++PNTRHCLY
Sbjct: 171 SVALQYYIHLRLNYDPGWKQIKVILSDANVPGEGEHKVMSYIRGQRNLPGFNPNTRHCLY 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIMLALATHEVHFSILREVVFTPGQQ+KCFLCGQ GHLAA CEGKAKRKAGEFDE
Sbjct: 231 GLDADLIMLALATHEVHFSILREVVFTPGQQEKCFLCGQVGHLAAKCEGKAKRKAGEFDE 290
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
KGD +VPKKPYQFL+IWTLREY++YEFR+PNPPF+IDLE I+DDFIFMCFFVGNDFLPH
Sbjct: 291 KGD-AIVPKKPYQFLNIWTLREYIEYEFRMPNPPFQIDLERIIDDFIFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
MPTLEIREGAINLLMAVYKKEF ++GGYLTD P L RVEHFIQAVGSYED+IFQKRAR
Sbjct: 350 MPTLEIREGAINLLMAVYKKEFPSMGGYLTDACTPDLNRVEHFIQAVGSYEDKIFQKRAR 409
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRL 360
LHQR AERI+R+KAQA+RGDD++P + D +VPV+RF GSRLASG SP++Q+ G
Sbjct: 410 LHQRQAERIRRDKAQAKRGDDLDPHVRTDLIVPVARFQGSRLASGSVASPFEQN---GSH 466
Query: 361 DNGKGTSGRPHKVPRLSSGATIGAAI-VEAENSFETDPQENKEEFKAKLKELLRDKSDAF 419
N R K R+SS + +A VEAENS E +ENKE+ K+ LK+ LR+KSD F
Sbjct: 467 KNSTEKGSRAQKAARVSSSDSSLSAALVEAENSLEAQERENKEDMKSMLKDALREKSDLF 526
Query: 420 NSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGV 479
NS+NPEEDKVKLGEPGW+ERYYE+KF A+TPE+ EE R+DVVL+YTEGLCWVMHYYYEGV
Sbjct: 527 NSENPEEDKVKLGEPGWRERYYEDKFGARTPEQIEEIRRDVVLKYTEGLCWVMHYYYEGV 586
Query: 480 CSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLM 539
CSWQWFYPYHYAPFASDLK L + NI+F LG PFKPF+QL+GVFP+ASSHALP YRKLM
Sbjct: 587 CSWQWFYPYHYAPFASDLKGLGELNITFNLGSPFKPFDQLMGVFPAASSHALPLQYRKLM 646
Query: 540 TDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 599
+DPNSPI DFYP DFEVDMNGKR+SWQGIAKLPFIDE+RLL E+KK+EHTLT EEARRNS
Sbjct: 647 SDPNSPIIDFYPIDFEVDMNGKRFSWQGIAKLPFIDESRLLAEIKKVEHTLTPEEARRNS 706
Query: 600 IMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPH 659
M +MLFV SHPLS IY+L+ L ER +KE L+P S GMNGYIS C GDP
Sbjct: 707 TMYNMLFVNGSHPLSPYIYSLNSKFGHLPDDERNTIKELLDPSASGGMNGYISLCGGDPS 766
Query: 660 PPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKPAPVLWH 719
PPVFRSPV +EDIM NQV+C+IYKLPD HKH+ RPP GVI PKKIV+ DLKP PVLWH
Sbjct: 767 PPVFRSPVDGLEDIMDNQVICSIYKLPDPHKHIARPPIGVIIPKKIVEAGDLKPPPVLWH 826
Query: 720 EDSGRRPHEN-----------GRHNPHGTISGRQLGEAAHRLVANSLQHMKVDRNGYGDR 768
ED+GRRP++N R NP G + GRQLGEAAHRLVANSL R+G
Sbjct: 827 EDTGRRPYDNNNNNRRHSDNSSRQNPPGAMHGRQLGEAAHRLVANSLN----VRSG---- 878
Query: 769 MHGSPLPYAAAPYVPPVPSYQEYGVYDQGYNRFSQPRTDSYPAGHSQSSISAAQPPYDGG 828
Y P P YQ + Y PR + P G + P G
Sbjct: 879 ----------GQYAPARP-YQTI-MSGMHYPNGMPPRMER-PVGRPGWHVPGDNVP--NG 923
Query: 829 YSQHYASNTSHHPNRRYHPQYDRNSSGEHPTHLYNPSGIHQNGGPRYPPRPMGSTSSGAN 888
YAS + HH QY+R++ G H + + + PR +G SG +
Sbjct: 924 QVPIYASPSGHH-------QYERDNRGRHQPYARD---------SHHDPRAVGRVQSGYH 967
Query: 889 LYPPQGGYSGYQSPAAGSFNQWGGANQSMPRGYGQGQHHQRRDGGYQQYHDQQRNYSHLQ 948
Q + Y S AA + +G YG H GGYQ Q
Sbjct: 968 ----QNSGNTYSSVAAAPSSGFG--------RYGHPSHAGDYAGGYQPPPYAPIQQWQQQ 1015
Query: 949 GNHQQRGNQGQHQPRGNQGQYVRDNQHRGNYGHHQQNNQQRNNQFTALDRRPKRPPPGGD 1008
H + G P QQ N++ LDR R PP G
Sbjct: 1016 QPHSSYSSGGGAPP-----------------ARPSSRPQQSQNRYCTLDRTSNRRPPSGH 1058
Query: 1009 G 1009
G
Sbjct: 1059 G 1059
>gi|413921159|gb|AFW61091.1| hypothetical protein ZEAMMB73_651968 [Zea mays]
Length = 1058
Score = 1135 bits (2937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 620/939 (66%), Positives = 703/939 (74%), Gaps = 60/939 (6%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+KDAAD+AAEEERLR+EFEREGR+LP K SQ DSNVITPGTEFMAVL
Sbjct: 111 MNQQRSRRFRAAKDAADAAAEEERLREEFEREGRRLPAKQQSQTCDSNVITPGTEFMAVL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S+ALQYYIH RLN DPGW+KIKVILSDANVPGEGEHKIMSY+R QRNLPG++PNTRHCLY
Sbjct: 171 SVALQYYIHQRLNYDPGWKKIKVILSDANVPGEGEHKIMSYIRGQRNLPGFNPNTRHCLY 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQ GHLAANCEGKAKRKAGE+DE
Sbjct: 231 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQVGHLAANCEGKAKRKAGEYDE 290
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
KG E +VPKKPYQFL+IWTLREYL+YEFR+PNPPF+ID E IVDDFIFMCFFVGNDFLPH
Sbjct: 291 KG-EAIVPKKPYQFLNIWTLREYLEYEFRMPNPPFQIDFERIVDDFIFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
MPTLEIREGAINLLMAVYKKEF ++GGYLTD P L RVEHFIQAVGSYED+IFQKRAR
Sbjct: 350 MPTLEIREGAINLLMAVYKKEFPSMGGYLTDSCTPDLNRVEHFIQAVGSYEDKIFQKRAR 409
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRL 360
LHQR AERIKREKAQA+RGDD++P + D +VPVS F GSRLASG PSPY+Q+
Sbjct: 410 LHQRQAERIKREKAQAKRGDDLDPHVRDDLIVPVSNFRGSRLASGAVPSPYEQN------ 463
Query: 361 DNGKGTSGRPHKVPRLSSGATIGAAI-VEAENSFETDPQENKEEFKAKLKELLRDKSDAF 419
+ + + K PR+SS + AA VEAE E +ENKEE K+ LK+ LR+KSD F
Sbjct: 464 GSQRERYNQTRKAPRVSSSGSSIAAAIVEAEQDLEAQERENKEELKSMLKDALREKSDVF 523
Query: 420 NSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGV 479
NS+N EEDKVKLGEPGW++RYYEEKF A+TPE EE R+DV L+YTEGLCWVMHYYYEGV
Sbjct: 524 NSENSEEDKVKLGEPGWRDRYYEEKFGARTPERMEEIRRDVALKYTEGLCWVMHYYYEGV 583
Query: 480 CSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLM 539
CSWQWFYPYHYAPFASDL L Q NI+FELG PFKPF+QL+GVFP+AS+HALP YR+LM
Sbjct: 584 CSWQWFYPYHYAPFASDLTSLSQLNITFELGSPFKPFDQLMGVFPAASAHALPLKYRQLM 643
Query: 540 TDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 599
TDPNSPI DFYPTDFEVDMNGKR+SWQGIAKLPFI+E RLL E+KK+E TLT EEARRNS
Sbjct: 644 TDPNSPIIDFYPTDFEVDMNGKRFSWQGIAKLPFIEEDRLLAEIKKVEDTLTPEEARRNS 703
Query: 600 IMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPH 659
M +MLFV +H LS IY+L+ L K+R +KE+L+P S GMNGYI+ C GDP
Sbjct: 704 TMCNMLFVNGAHSLSPYIYSLNSKFGHLPDKDRGAIKEKLDPSASGGMNGYIALCGGDPS 763
Query: 660 PPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKPAPVLWH 719
PPVFRSPV +EDIM NQV+C+IYKLPD HKH+ RPPAGVI PKK V+ DLKP PVLWH
Sbjct: 764 PPVFRSPVDGLEDIMDNQVICSIYKLPDPHKHIARPPAGVIIPKKSVEAGDLKPPPVLWH 823
Query: 720 EDSGRRPHEN---------GRHNPHGTISGRQLGEAAHRLVANSLQHMKVDRNGYGDRMH 770
EDSGRRPH+N R NP G +SGRQLGEAAHRLV NSL N G +
Sbjct: 824 EDSGRRPHDNNHRRPYDNSNRQNPSGALSGRQLGEAAHRLVVNSL-------NVRGGGQN 876
Query: 771 GSP-LPYAAAPYVPPVPSYQEYGVYDQGYNRFSQPRTDSYPAGHSQSSISAAQPPYDGGY 829
SP +PY P+ G + G N PR + PAG S +S D
Sbjct: 877 NSPSMPYQTMMSGMNYPN----GRHHVG-NHGVPPRMEQ-PAGRSGWHVS------DDNM 924
Query: 830 SQHYASNTSHHPNRRYHPQYDRNSSGEHPTHLY------------NPSGIHQN-GGPRYP 876
+ A+ + P R +++R + G + Y P G HQN G P+
Sbjct: 925 TNGQAAYGQYQPERLGPSRHERGNHGRQQYNPYARDNHHDSSGRVQPPGYHQNRGNPQ-- 982
Query: 877 PRPMGSTSSGANLYPP-----QGGYSGYQSPAAGSFNQW 910
+ S+G LY P GGYSG P QW
Sbjct: 983 ---SAAPSAGPGLYGPYPPAYAGGYSGGYQPVPYGGQQW 1018
>gi|9369381|gb|AAF87130.1|AC006434_26 F10A5.15 [Arabidopsis thaliana]
Length = 1037
Score = 1129 bits (2920), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 579/824 (70%), Positives = 659/824 (79%), Gaps = 49/824 (5%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR++KDA+D+AAEEERLR+EFEREGR+LPPK DSQVFDSNVITPGTEFM VL
Sbjct: 111 MNQQRSRRFRSAKDASDAAAEEERLREEFEREGRRLPPKVDSQVFDSNVITPGTEFMGVL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
SIALQYY+HLRLN+D GW+ IKVILSDANVPGEGEHKIMSY+RLQRNLPG+DPNTRHCLY
Sbjct: 171 SIALQYYVHLRLNHDVGWKNIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLY 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML LATHEVHFSILREVV+TPGQQ++CFLCGQ GH A+NCEGK K++AGE DE
Sbjct: 231 GLDADLIMLGLATHEVHFSILREVVYTPGQQERCFLCGQMGHFASNCEGKPKKRAGESDE 290
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
KGD KKPYQFLHIW LREYL+ E RIPNPPFEIDLE IVDDFIF+CFFVGNDFLPH
Sbjct: 291 KGDGNDFVKKPYQFLHIWVLREYLELEMRIPNPPFEIDLERIVDDFIFICFFVGNDFLPH 350
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
MPTLEIREGAINLLMAVYKKEFR+ GYLTDG KP+L+RVE FIQAVGS+ED+IFQKRA
Sbjct: 351 MPTLEIREGAINLLMAVYKKEFRSFDGYLTDGCKPNLKRVEQFIQAVGSFEDKIFQKRAM 410
Query: 301 LHQRHAERIKREKA--QARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVG 358
HQR AER+KR+KA +R DD P QPD LVPV+RF GSRLAS P+PSP+Q ++
Sbjct: 411 QHQRQAERVKRDKAGKATKRMDDEAPTVQPD-LVPVARFSGSRLASAPTPSPFQSND--- 466
Query: 359 RLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDA 418
G S KV RLS G+++GAAIV+ ENS E+D +ENKEE K KLKEL+R+KSDA
Sbjct: 467 ------GRSAPHQKVRRLSPGSSVGAAIVDVENSLESDERENKEELKTKLKELIREKSDA 520
Query: 419 FNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEG 478
FNSD EEDKVKLG+PGW+ERYYEEKF+ TPEE E RKDVVL+YTEGLCWVMHYY EG
Sbjct: 521 FNSDTTEEDKVKLGQPGWRERYYEEKFSVVTPEEMERVRKDVVLKYTEGLCWVMHYYMEG 580
Query: 479 VCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKL 538
VCSWQWFYPYHYAPFASDLKDL + +I FELG PFKPFNQLLGVFP+ASSHALPE YR L
Sbjct: 581 VCSWQWFYPYHYAPFASDLKDLGEMDIKFELGTPFKPFNQLLGVFPAASSHALPERYRTL 640
Query: 539 MTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
MTDPNSPI DFYPTDFEVDMNGKR+SWQGIAKLPFIDE RLL+ V ++E TLT+EE RRN
Sbjct: 641 MTDPNSPIIDFYPTDFEVDMNGKRFSWQGIAKLPFIDERRLLEAVSEVEFTLTDEEKRRN 700
Query: 599 SIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPEL--------------- 643
S M DMLF+ SH L+ +++LD HC+QL +ERV+ K ++ P+L
Sbjct: 701 SRMCDMLFIATSHRLAELVFSLDNHCRQLSARERVDFKVKIKPKLRPTNTKLFPDVLITT 760
Query: 644 -SDGMNGYISPCAGDPHPPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFP 702
SDGMNGY++PC+G+ HPPVFRSP+ MEDI+ NQV+ LPDAH+H+TRPP GVIFP
Sbjct: 761 CSDGMNGYLTPCSGETHPPVFRSPMEGMEDILTNQVI-----LPDAHEHITRPPPGVIFP 815
Query: 703 KKIVQLEDLKPAPVLWHEDSGRRP--------------HENGRHNPHGTISGRQLGEAAH 748
KK V + DLKP P LWHED+GRRP + GR NP G++SGR LG AAH
Sbjct: 816 KKTVDIGDLKPPPALWHEDNGRRPMHNNHGMHNNHGMHNNQGRQNPPGSVSGRHLGNAAH 875
Query: 749 RLVANSLQHMKVDRNGYGDRMHGSPLPYAAAPYVPPVPSYQEYG 792
RLV+NSLQ M DR + Y YVPP+P YQ G
Sbjct: 876 RLVSNSLQ-MGTDRYQTPTDVPAPGYGYNPPQYVPPIP-YQHGG 917
>gi|413921160|gb|AFW61092.1| hypothetical protein ZEAMMB73_651968 [Zea mays]
Length = 1079
Score = 1124 bits (2907), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 620/960 (64%), Positives = 703/960 (73%), Gaps = 81/960 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+KDAAD+AAEEERLR+EFEREGR+LP K SQ DSNVITPGTEFMAVL
Sbjct: 111 MNQQRSRRFRAAKDAADAAAEEERLREEFEREGRRLPAKQQSQTCDSNVITPGTEFMAVL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S+ALQYYIH RLN DPGW+KIKVILSDANVPGEGEHKIMSY+R QRNLPG++PNTRHCLY
Sbjct: 171 SVALQYYIHQRLNYDPGWKKIKVILSDANVPGEGEHKIMSYIRGQRNLPGFNPNTRHCLY 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQ GHLAANCEGKAKRKAGE+DE
Sbjct: 231 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQVGHLAANCEGKAKRKAGEYDE 290
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
KG E +VPKKPYQFL+IWTLREYL+YEFR+PNPPF+ID E IVDDFIFMCFFVGNDFLPH
Sbjct: 291 KG-EAIVPKKPYQFLNIWTLREYLEYEFRMPNPPFQIDFERIVDDFIFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
MPTLEIREGAINLLMAVYKKEF ++GGYLTD P L RVEHFIQAVGSYED+IFQKRAR
Sbjct: 350 MPTLEIREGAINLLMAVYKKEFPSMGGYLTDSCTPDLNRVEHFIQAVGSYEDKIFQKRAR 409
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRL 360
LHQR AERIKREKAQA+RGDD++P + D +VPVS F GSRLASG PSPY+Q+
Sbjct: 410 LHQRQAERIKREKAQAKRGDDLDPHVRDDLIVPVSNFRGSRLASGAVPSPYEQN------ 463
Query: 361 DNGKGTSGRPHKVPRLSSGATIGAAI-VEAENSFETDPQENKEEFKAKLKELLRDKSDAF 419
+ + + K PR+SS + AA VEAE E +ENKEE K+ LK+ LR+KSD F
Sbjct: 464 GSQRERYNQTRKAPRVSSSGSSIAAAIVEAEQDLEAQERENKEELKSMLKDALREKSDVF 523
Query: 420 NSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGV 479
NS+N EEDKVKLGEPGW++RYYEEKF A+TPE EE R+DV L+YTEGLCWVMHYYYEGV
Sbjct: 524 NSENSEEDKVKLGEPGWRDRYYEEKFGARTPERMEEIRRDVALKYTEGLCWVMHYYYEGV 583
Query: 480 CSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLM 539
CSWQWFYPYHYAPFASDL L Q NI+FELG PFKPF+QL+GVFP+AS+HALP YR+LM
Sbjct: 584 CSWQWFYPYHYAPFASDLTSLSQLNITFELGSPFKPFDQLMGVFPAASAHALPLKYRQLM 643
Query: 540 TDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 599
TDPNSPI DFYPTDFEVDMNGKR+SWQGIAKLPFI+E RLL E+KK+E TLT EEARRNS
Sbjct: 644 TDPNSPIIDFYPTDFEVDMNGKRFSWQGIAKLPFIEEDRLLAEIKKVEDTLTPEEARRNS 703
Query: 600 IMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPEL---------------- 643
M +MLFV +H LS IY+L+ L K+R +KE+L+P
Sbjct: 704 TMCNMLFVNGAHSLSPYIYSLNSKFGHLPDKDRGAIKEKLDPSARLAKFFRIIDSLTLLL 763
Query: 644 -----SDGMNGYISPCAGDPHPPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAG 698
S GMNGYI+ C GDP PPVFRSPV +EDIM NQV+C+IYKLPD HKH+ RPPAG
Sbjct: 764 LFLLFSGGMNGYIALCGGDPSPPVFRSPVDGLEDIMDNQVICSIYKLPDPHKHIARPPAG 823
Query: 699 VIFPKKIVQLEDLKPAPVLWHEDSGRRPHEN---------GRHNPHGTISGRQLGEAAHR 749
VI PKK V+ DLKP PVLWHEDSGRRPH+N R NP G +SGRQLGEAAHR
Sbjct: 824 VIIPKKSVEAGDLKPPPVLWHEDSGRRPHDNNHRRPYDNSNRQNPSGALSGRQLGEAAHR 883
Query: 750 LVANSLQHMKVDRNGYGDRMHGSP-LPYAAAPYVPPVPSYQEYGVYDQGYNRFSQPRTDS 808
LV NSL N G + SP +PY P+ G + G N PR +
Sbjct: 884 LVVNSL-------NVRGGGQNNSPSMPYQTMMSGMNYPN----GRHHVG-NHGVPPRMEQ 931
Query: 809 YPAGHSQSSISAAQPPYDGGYSQHYASNTSHHPNRRYHPQYDRNSSGEHPTHLY------ 862
PAG S +S D + A+ + P R +++R + G + Y
Sbjct: 932 -PAGRSGWHVS------DDNMTNGQAAYGQYQPERLGPSRHERGNHGRQQYNPYARDNHH 984
Query: 863 ------NPSGIHQN-GGPRYPPRPMGSTSSGANLYPP-----QGGYSGYQSPAAGSFNQW 910
P G HQN G P+ + S+G LY P GGYSG P QW
Sbjct: 985 DSSGRVQPPGYHQNRGNPQ-----SAAPSAGPGLYGPYPPAYAGGYSGGYQPVPYGGQQW 1039
>gi|222619617|gb|EEE55749.1| hypothetical protein OsJ_04252 [Oryza sativa Japonica Group]
Length = 1042
Score = 1116 bits (2887), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 631/1025 (61%), Positives = 711/1025 (69%), Gaps = 111/1025 (10%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+KDAAD+AAEEERLR+EFEREGRKLPPK SQ DSNVITPGTEFMAVL
Sbjct: 111 MNQQRSRRFRAAKDAADAAAEEERLREEFEREGRKLPPKQQSQTCDSNVITPGTEFMAVL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
SIALQYYIHLRLN DPGW+++KVILSDANVPGEGEHKIMSY+R QRNLPG++PNTRHCLY
Sbjct: 171 SIALQYYIHLRLNYDPGWKQVKVILSDANVPGEGEHKIMSYIRGQRNLPGFNPNTRHCLY 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIMLALATHEVHFSILREVV+TPGQQDKCFLCGQ GHLAANCEGK KRKAGEFDE
Sbjct: 231 GLDADLIMLALATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAGEFDE 290
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
KG E +VPKKPYQFL+IWTLREYL+YEFR+ NPPF ID E IVDDFIFMCFFVGNDFLPH
Sbjct: 291 KG-EAIVPKKPYQFLNIWTLREYLEYEFRMQNPPFPIDFERIVDDFIFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
MPTLEIRE P L +VEHFIQAVGSYED+IFQKRAR
Sbjct: 350 MPTLEIRE--------------------------PDLNKVEHFIQAVGSYEDKIFQKRAR 383
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRL 360
LHQR AERIKREKAQA+RGDD++P + D +VPV+RF GSRLASGP PSPY+Q+ G
Sbjct: 384 LHQRQAERIKREKAQAKRGDDLDPHVRDDLIVPVARFQGSRLASGPVPSPYEQN---GSD 440
Query: 361 DNGKGTSGRPHKVPRLSSGATIGAAI-VEAENSFETDPQENKEEFKAKLKELLRDKSDAF 419
N G + R K R+SS + AA VEAEN E +ENKE+ K LK+ LR+KSD F
Sbjct: 441 KNNGGKNSRARKAARVSSSGSSIAAAIVEAENDLEAQERENKEDLKTMLKDALREKSDVF 500
Query: 420 NSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGV 479
NS+NPEEDK+KLGEPGW+ERYYEEKF A+TP + EE R+DVVL+YTEGLCWVMHYYYEGV
Sbjct: 501 NSENPEEDKIKLGEPGWRERYYEEKFGARTPGQIEEIRRDVVLKYTEGLCWVMHYYYEGV 560
Query: 480 CSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLM 539
CSWQWFYPYHYAPFASDL L Q NI+FELG PFKPF+QL+GVFP+ASSHALP YR+LM
Sbjct: 561 CSWQWFYPYHYAPFASDLSGLGQLNITFELGSPFKPFDQLMGVFPAASSHALPVQYRQLM 620
Query: 540 TDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 599
TD NSPI DFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLL E+KK+EHTLT EEARRNS
Sbjct: 621 TDANSPIIDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLAEIKKVEHTLTPEEARRNS 680
Query: 600 IMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPH 659
IM +MLFV SHPLS IY+L+ L +ER E+KE+++P S GMNGYIS C+GDP
Sbjct: 681 IMFNMLFVNGSHPLSPYIYSLNSKFGHLPDRERNEIKEKIDPSSSGGMNGYISLCSGDPC 740
Query: 660 PPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKPAPVLWH 719
PPVFRSPV +EDIM NQV+C IYKLPD+HKH+ RPP GVI PKK V+ DLKP PVLWH
Sbjct: 741 PPVFRSPVDGLEDIMDNQVICTIYKLPDSHKHIARPPVGVIIPKKTVEATDLKPPPVLWH 800
Query: 720 EDSGRRPHEN---------GRHNPHGTISGRQLGEAAHRLVANSLQ-----HMKVDRNGY 765
EDSGRRPH+N R NP G ISGRQLGEAAHRLV NSL Y
Sbjct: 801 EDSGRRPHDNNNRRPYENSNRQNPAGAISGRQLGEAAHRLVVNSLNARSGGQYNTPSMPY 860
Query: 766 GDRMHGSPLPYAAAPYVPPVPSYQEYGVYDQGYNRFSQPRTDSYPAGHSQSSISAAQPPY 825
M+G P P +PP R QP P H + Q P
Sbjct: 861 QTIMNGMPYPNG----IPP---------------RMEQPA----PGWHVPGDLPNGQVP- 896
Query: 826 DGGYSQHYASNTSHHPNRRYHP-QYDRNSSGEHPTHLYNPSGIHQNGGPRYPPRPMGSTS 884
YAS++ H+ N R P QY R++ G +P N H + R PP
Sbjct: 897 -----PAYASSSGHYQNDRSGPSQYGRDNHGRYPYARDN----HHDSRGRVPP----YHQ 943
Query: 885 SGANLYPPQGGYSGYQSPAAGSFNQWGGANQSMPRGYGQGQHHQRRDGGYQQYHDQQRNY 944
SG N Y + +P+AG G Q P G G+ +Q Y Q+
Sbjct: 944 SGGN------SYQSHSAPSAGP----GRYAQPPPYAGGYGRSYQ--PAPYGGGQQWQQQQ 991
Query: 945 SHLQGNHQQRGNQGQHQPRGNQGQYVRDNQHRGNYGHHQQNNQQRNNQFTALDRRPKRPP 1004
G++ G P G R N QQ N++ LDR R P
Sbjct: 992 QQPYGSYAGSG------PYGGGAPPARPNSR----------PQQSQNRYNTLDRNSNRRP 1035
Query: 1005 PGGDG 1009
P G G
Sbjct: 1036 PPGHG 1040
>gi|357472639|ref|XP_003606604.1| 5'-3' exoribonuclease [Medicago truncatula]
gi|355507659|gb|AES88801.1| 5'-3' exoribonuclease [Medicago truncatula]
Length = 909
Score = 1080 bits (2792), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 532/723 (73%), Positives = 589/723 (81%), Gaps = 13/723 (1%)
Query: 57 MAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTR 116
MAVLS+ALQYYIHLRLNNDPGW+ IKVILSDANVPGEGEHKI SY+RLQRNL GYDPNT+
Sbjct: 1 MAVLSVALQYYIHLRLNNDPGWKNIKVILSDANVPGEGEHKITSYIRLQRNLKGYDPNTQ 60
Query: 117 HCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAG 176
HCLYGLDADLIML LATHE+HFSILREVVFTPGQ DKCFLCGQ GH+AA CEGKAKRK
Sbjct: 61 HCLYGLDADLIMLGLATHEIHFSILREVVFTPGQ-DKCFLCGQMGHMAAECEGKAKRKTD 119
Query: 177 EFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGND 236
DEKGD +V K P+QFL+IWTLREYL+YE RIPN PFEID ECI+DDFIF+CFFVGND
Sbjct: 120 --DEKGDAIVA-KLPFQFLNIWTLREYLEYEMRIPNSPFEIDFECILDDFIFICFFVGND 176
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLPHMPTL+IREGAI+ LM VYK EF LGGYLT+GSKP+L RVEHFIQAVGS+ED IFQ
Sbjct: 177 FLPHMPTLDIREGAIDSLMTVYKNEFTKLGGYLTNGSKPNLSRVEHFIQAVGSHEDEIFQ 236
Query: 297 KRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSEC 356
KRARLHQR E IKR K QAR GDDV P QP+SL +S+FHGSRLAS PSP+QQS
Sbjct: 237 KRARLHQRQVETIKRRKRQAR-GDDVGPQVQPESLAAISQFHGSRLASALMPSPFQQS-- 293
Query: 357 VGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKS 416
+ K +P KV RLSSG T+ AAIVEAENS E D Q+N++E KAKLK +L DKS
Sbjct: 294 ----GHNKEVLEKPSKVSRLSSGVTVVAAIVEAENSLEIDVQDNEDELKAKLKRILLDKS 349
Query: 417 DAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYY 476
D FNS EDK+KLGEPGWKERYYEEKF+AKTPEE RKDVVL+YTEGLCWVMHYYY
Sbjct: 350 DVFNSKGGHEDKIKLGEPGWKERYYEEKFSAKTPEELVAIRKDVVLKYTEGLCWVMHYYY 409
Query: 477 EGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYR 536
EGVCSWQWFYPYHYAPFASDLK L + NI+FELG PFKPF+QL+GVFP+ASSHALPE YR
Sbjct: 410 EGVCSWQWFYPYHYAPFASDLKGLSELNINFELGAPFKPFDQLIGVFPAASSHALPETYR 469
Query: 537 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 596
KLMTDP+SPI DFYP DFEVDMNGKR++WQGIAKLPFIDE RLL V+KIE+ LT EE R
Sbjct: 470 KLMTDPSSPIIDFYPIDFEVDMNGKRFAWQGIAKLPFIDETRLLAAVQKIENFLTPEEKR 529
Query: 597 RNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAG 656
RN+IM DMLFV HPLSA I TLD C+ ER VKE++NP S GMNGYIS C G
Sbjct: 530 RNAIMFDMLFVNSCHPLSACISTLDNKCRNTSNCERANVKEKINPIESGGMNGYISFCDG 589
Query: 657 DPHPPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKPAPV 716
+P PP FRSPVA MEDI+ N V+CAIY+LPDAH+H+ RP GV FPKK V +EDLKP PV
Sbjct: 590 EPCPPFFRSPVAGMEDIIDNHVICAIYRLPDAHEHINRPLHGVKFPKKTVAIEDLKPEPV 649
Query: 717 LWHEDSGRRPHENGRHNPHGTISGRQLG-EAAHRLVANSLQHMKVDRNGYGDRMHGSPLP 775
LWHEDSGRR E+ R P GT S RQL EAAHRLV NSLQ +K+D N Y M+G +P
Sbjct: 650 LWHEDSGRRYGESQRKKPSGTYSCRQLNEEAAHRLVVNSLQ-VKMDANRYHHPMNGPRMP 708
Query: 776 YAA 778
YAA
Sbjct: 709 YAA 711
>gi|22531090|gb|AAM97049.1| unknown protein [Arabidopsis thaliana]
gi|23197934|gb|AAN15494.1| unknown protein [Arabidopsis thaliana]
Length = 763
Score = 980 bits (2534), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/645 (75%), Positives = 553/645 (85%), Gaps = 12/645 (1%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR++KDA+D+AAEEERLR+EFEREGR+LPPK DSQVFDSNVITPGTEFM VL
Sbjct: 111 MNQQRSRRFRSAKDASDAAAEEERLREEFEREGRRLPPKVDSQVFDSNVITPGTEFMGVL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
SIALQYY+HLRLN+D GW+ IKVILSDANVPGEGEHKIMSY+RLQRNLPG+DPNTRHCLY
Sbjct: 171 SIALQYYVHLRLNHDVGWKNIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLY 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML LATHEVHFSILREVV+TPGQQ++CFLCGQ GH A+NCEGK K++AGE DE
Sbjct: 231 GLDADLIMLGLATHEVHFSILREVVYTPGQQERCFLCGQMGHFASNCEGKPKKRAGESDE 290
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
KGD KKPYQFLHIW LREYL+ E RIPNPPFEIDLE IVDDFIF+CFFVGNDFLPH
Sbjct: 291 KGDGNDFVKKPYQFLHIWVLREYLELEMRIPNPPFEIDLERIVDDFIFICFFVGNDFLPH 350
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
MPTLEIREGAINLLMAVYKKEFR+ GYLTDG KP+L+RVE FIQAVGS+ED+IFQKRA
Sbjct: 351 MPTLEIREGAINLLMAVYKKEFRSFDGYLTDGCKPNLKRVEQFIQAVGSFEDKIFQKRAM 410
Query: 301 LHQRHAERIKREKA--QARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVG 358
HQR AER+KR+KA +R DD P QPD LVPV+RF GSRLAS P+PSP+Q ++
Sbjct: 411 QHQRQAERVKRDKAGKATKRMDDEAPTVQPD-LVPVARFSGSRLASAPTPSPFQSND--- 466
Query: 359 RLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDA 418
G S KV RLS G+++GAAIV+ ENS E+D +ENKEE K KLKEL+R+KSDA
Sbjct: 467 ------GRSAPHQKVRRLSPGSSVGAAIVDVENSLESDERENKEELKTKLKELIREKSDA 520
Query: 419 FNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEG 478
FNSD EEDKVKLG+PGW+ERYYEEKF+ TPEE E RKDVVL+YTEGLCWVMHYY EG
Sbjct: 521 FNSDTTEEDKVKLGQPGWRERYYEEKFSVVTPEEMERVRKDVVLKYTEGLCWVMHYYMEG 580
Query: 479 VCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKL 538
VCSWQWFYPYHYAPFASDLKDL + +I FELG PFKPFNQLLGVFP+ASSHALPE YR L
Sbjct: 581 VCSWQWFYPYHYAPFASDLKDLGEMDIKFELGTPFKPFNQLLGVFPAASSHALPERYRTL 640
Query: 539 MTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
MTDPNSPI DFYPTDFEVDMNGKR+SWQGIAKLPFIDE RLL+ V ++E TLT+EE RRN
Sbjct: 641 MTDPNSPIIDFYPTDFEVDMNGKRFSWQGIAKLPFIDERRLLEAVSEVEFTLTDEEKRRN 700
Query: 599 SIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPEL 643
S M DMLF+ SH L+ +++LD HC+QL +ERV+ K ++ P+L
Sbjct: 701 SRMCDMLFIATSHRLAELVFSLDNHCRQLSARERVDFKVKIKPKL 745
>gi|242080797|ref|XP_002445167.1| hypothetical protein SORBIDRAFT_07g005160 [Sorghum bicolor]
gi|241941517|gb|EES14662.1| hypothetical protein SORBIDRAFT_07g005160 [Sorghum bicolor]
Length = 945
Score = 915 bits (2365), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/596 (78%), Positives = 519/596 (87%), Gaps = 8/596 (1%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+KDAAD+AAEEERLR+EFEREGR+LP K SQ DSNVITPGTEFMAVL
Sbjct: 111 MNQQRSRRFRAAKDAADAAAEEERLREEFEREGRRLPAKQQSQTCDSNVITPGTEFMAVL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
SIALQYYIH RLN DPGW+KIKVILSDANVPGEGEHKIMSY+R QRNLPG++PNTRHCLY
Sbjct: 171 SIALQYYIHQRLNYDPGWKKIKVILSDANVPGEGEHKIMSYIRGQRNLPGFNPNTRHCLY 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQ GHLAANCEGKAKRKAGE+DE
Sbjct: 231 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQVGHLAANCEGKAKRKAGEYDE 290
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
KG E +VPKKPYQFL+IWTLREYL+YEFR+PNPPF+ID E IVDDFIF+CFFVGNDFLPH
Sbjct: 291 KG-EAIVPKKPYQFLNIWTLREYLEYEFRMPNPPFQIDFERIVDDFIFICFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
MPTLEIREGAINLLMAVYKKEF ++GGYLTD P L RVEHFIQAVGSYED+IFQKRAR
Sbjct: 350 MPTLEIREGAINLLMAVYKKEFPSMGGYLTDSCTPDLNRVEHFIQAVGSYEDKIFQKRAR 409
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRL 360
LHQR +ERIKREKAQA+RGDD++P + D +VPV+ F GSRLASG PSPY+Q+
Sbjct: 410 LHQRQSERIKREKAQAKRGDDLDPHVRDDLIVPVANFRGSRLASGAVPSPYEQN------ 463
Query: 361 DNGKGTSGRPHKVPRLSSGATIGAAI-VEAENSFETDPQENKEEFKAKLKELLRDKSDAF 419
+ + + + K PR+SS + AA VEAE E ENKE K+ LK+ LR KSD F
Sbjct: 464 GSRRERNSQALKAPRVSSSGSSIAAAIVEAEKDLEAQELENKENLKSMLKDALRGKSDVF 523
Query: 420 NSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGV 479
NS+NPEEDKVKLGEPGW++RYYE+KF A+TPE EE R+DV L+YTEGLCWVMHYYYEGV
Sbjct: 524 NSENPEEDKVKLGEPGWRDRYYEDKFGARTPERMEEIRRDVALKYTEGLCWVMHYYYEGV 583
Query: 480 CSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLM 539
CSWQWFYPYHYAPFASDL+ L Q NI+FELG PFKPF+QL+GVFP+AS+HALP YR+LM
Sbjct: 584 CSWQWFYPYHYAPFASDLRSLSQLNITFELGLPFKPFDQLMGVFPAASAHALPLKYRQLM 643
Query: 540 TDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEA 595
TDPNSPI DFYPTDFEVDMNGKR+SWQGIAKLPFIDE RLL E+KK+EHTLT EA
Sbjct: 644 TDPNSPIVDFYPTDFEVDMNGKRFSWQGIAKLPFIDEDRLLAEIKKVEHTLTSVEA 699
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 110/245 (44%), Gaps = 54/245 (22%)
Query: 706 VQLEDLKPAPVLWHEDSGRRPHEN---------GRHNPHGTISGRQLGEAAHRLVANSLQ 756
V+ DLKP PVLWHEDSGRRPH+N R NP G++SGRQLGEAAHRLV NSL
Sbjct: 697 VEAGDLKPPPVLWHEDSGRRPHDNNHRGPYDKSNRSNPSGSLSGRQLGEAAHRLVVNSLS 756
Query: 757 HMKVDRNGYGDRMHGSP-LPYAAAPYVPPVPSYQEYGVYDQGYNRFSQPRTDSYPAGHS- 814
+ G H SP +PY P+ G + G N PR + PAG S
Sbjct: 757 NR-------GGGQHNSPSMPYQTIMSGMNYPN----GRHHMG-NHGVPPRMEQ-PAGRSG 803
Query: 815 ----QSSISAAQPPYDGGYSQHYASNTSHHPNR---RYHPQYDRN---SSGEHPTHLYNP 864
+++ Q YD + + NR RY+P N SSG P
Sbjct: 804 WHVPGDNMANGQAAYDQYQPERSGPSWHERDNRGGQRYNPYARENRQDSSGR-----VQP 858
Query: 865 SGIHQNGGPRYPPRPMGSTSSGANL---YPP--QGGYSGYQSPAAGSFNQW------GGA 913
G +QN G ++S+G L +PP GGYSG P QW GGA
Sbjct: 859 HGYYQNRGNSQ----SAASSAGPGLSGQHPPAYAGGYSGGYQPTPHGPQQWQQRPYGGGA 914
Query: 914 NQSMP 918
+ P
Sbjct: 915 PPTRP 919
>gi|15238990|ref|NP_199069.1| 5'-3' exoribonuclease 2 [Arabidopsis thaliana]
gi|75262831|sp|Q9FQ02.1|XRN2_ARATH RecName: Full=5'-3' exoribonuclease 2; AltName: Full=Protein
EXORIBONUCLEASE 2
gi|11875630|gb|AAG40733.1|AF286720_1 XRN2 [Arabidopsis thaliana]
gi|51970342|dbj|BAD43863.1| unnamed protein product [Arabidopsis thaliana]
gi|62319144|dbj|BAD94308.1| 5'-3' exoribonuclease 2 [Arabidopsis thaliana]
gi|332007441|gb|AED94824.1| 5'-3' exoribonuclease 2 [Arabidopsis thaliana]
Length = 1012
Score = 898 bits (2321), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/767 (60%), Positives = 574/767 (74%), Gaps = 35/767 (4%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFRA+KDAA++AAEEE+LR+EFEREG+KLPPK DSQVFDSNVITPGTEFMA L
Sbjct: 113 MNQQRARRFRAAKDAAEAAAEEEQLREEFEREGKKLPPKVDSQVFDSNVITPGTEFMATL 172
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S AL+YYIH+RLN+DPGW+ IKVILSDANVPGEGEHKIMSY+R +N PGY+PNT HCLY
Sbjct: 173 SFALRYYIHVRLNSDPGWKNIKVILSDANVPGEGEHKIMSYIRCNKNHPGYNPNTHHCLY 232
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML+LATHE+HFSILREVVF PG++ KCFLCGQ GH AA+CEGK KRK GE +
Sbjct: 233 GLDADLIMLSLATHEIHFSILREVVFFPGEEGKCFLCGQEGHRAADCEGKIKRKTGEMLD 292
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
+ VV KKPY+F++IW LREYL+++ +IP + +L+ ++DDFIF+CFFVGNDFLPH
Sbjct: 293 NTEADVVVKKPYEFVNIWILREYLEHDMQIPGA--KKNLDRLIDDFIFICFFVGNDFLPH 350
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
MPTLEIREGAI LLM+VYK +FR+ YLTD SK +LR VE FI+AVG YE++IFQKRA+
Sbjct: 351 MPTLEIREGAIELLMSVYKNKFRSAKKYLTDSSKLNLRNVERFIKAVGMYENQIFQKRAQ 410
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRL 360
+ QR +ER +R+KA+ + D+ AQ SR SG + +L
Sbjct: 411 VQQRQSERFRRDKARDKARDNARDNAQ-----------ASRQFSGK----------LVQL 449
Query: 361 DNGKGTSGRPHKVP-----RLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDK 415
D+ S H P RLS IG A VE ENS + + +N+E+ K KLK+LLRDK
Sbjct: 450 DSLDEVSDSLHSSPSRKYLRLSLDDNIGVANVETENSLKAEELDNEEDLKFKLKKLLRDK 509
Query: 416 SDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYY 475
D F S N E+DKVKL + GW+ERYYEEKF AK+ EE E+ R+DVVL+YTEGLCW+MHYY
Sbjct: 510 GDGFRSGNGEQDKVKLNKVGWRERYYEEKFAAKSVEEMEQIRRDVVLKYTEGLCWIMHYY 569
Query: 476 YEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHY 535
Y GVCSW WFYPYHYAPFASDLK L++ +I FELG PFKPFNQLL V PSAS+HALPE Y
Sbjct: 570 YHGVCSWNWFYPYHYAPFASDLKGLEKLDIKFELGSPFKPFNQLLAVLPSASAHALPECY 629
Query: 536 RKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEA 595
R LMT+P+SPI+DFYP DFE+DMNGKRYSWQGI+KLPF++E RLL+ ++E +LT EE
Sbjct: 630 RSLMTNPDSPIADFYPADFEIDMNGKRYSWQGISKLPFVEEKRLLEAAAQVEKSLTNEEI 689
Query: 596 RRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCA 655
RRNS + DMLFV+ SHPL I +L+ L +ER + E+++P LSDGMNGYI+ C
Sbjct: 690 RRNSALFDMLFVVASHPLGELIRSLNSRTNNLSNEERATIIEKIDPGLSDGMNGYIASCG 749
Query: 656 GDPHPPVFRSPVASMEDIMGNQVLCAIYKLPDAHK--HVTRPPAGVIFPKKIVQLEDLKP 713
GD P F S V MED++ NQV+CAIYKLP+ + +T + PKK + L DLK
Sbjct: 750 GDSQPSCFCSTVEGMEDVLTNQVICAIYKLPEDIRGSEITHQIPRLAIPKKTISLVDLKS 809
Query: 714 APVLWHEDSGRRPH-----ENGRHNPHGTISGRQLGEAAHRLVANSL 755
+LWHED +R + R+NP G+ISG +LG+A+HRLV ++
Sbjct: 810 GGLLWHEDGDKRRAPPKVIKIKRYNPEGSISGGRLGKASHRLVLQTI 856
>gi|297795249|ref|XP_002865509.1| hypothetical protein ARALYDRAFT_917497 [Arabidopsis lyrata subsp.
lyrata]
gi|297311344|gb|EFH41768.1| hypothetical protein ARALYDRAFT_917497 [Arabidopsis lyrata subsp.
lyrata]
Length = 1053
Score = 897 bits (2318), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/861 (56%), Positives = 591/861 (68%), Gaps = 103/861 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFRA+KDAA++AAEEE+LR+EFEREG+KLPPK DSQVFDSNVITPGTEFMA L
Sbjct: 112 MNQQRARRFRAAKDAAEAAAEEEQLREEFEREGKKLPPKVDSQVFDSNVITPGTEFMATL 171
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S AL+YYIH+RLN+DPGW+ IKVILSDANVPGEGEHKIMSY+R +N PGY+PNT HCLY
Sbjct: 172 SFALRYYIHVRLNSDPGWKNIKVILSDANVPGEGEHKIMSYIRCNKNHPGYNPNTHHCLY 231
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML+LATHE+HFSILREVVF PG++DKCFLCGQ GH AA+CEGK KRKAGE +
Sbjct: 232 GLDADLIMLSLATHEIHFSILREVVFFPGEEDKCFLCGQVGHRAADCEGKMKRKAGEMLD 291
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
+ VV KKPY+F++IW LREYL+++ +IPN + +L+ ++DDFIF+CFFVGNDFLPH
Sbjct: 292 DTEADVVVKKPYEFVNIWILREYLEHDMQIPNQRSKKNLDRLIDDFIFICFFVGNDFLPH 351
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
MPTLEIREGAI LLM+VYK +FR+ YLTD SK +LR VE FI+AVG+YE++IFQKRA+
Sbjct: 352 MPTLEIREGAIELLMSVYKNKFRSAKKYLTDSSKLNLRNVERFIKAVGTYENQIFQKRAQ 411
Query: 301 LHQRHAERIKREKAQARRGDDVEP-------LAQPDSLVPVSRFHGSRLASGPSPSPYQQ 353
+ QR + R R+KA+ + D V+ L Q DSL VS L S P
Sbjct: 412 VQQRQSGRFIRDKAREKARDSVQASRKFSGKLVQLDSLDEVS----DSLHSSP------- 460
Query: 354 SECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQ--------------- 398
P K RLS IG A VE ENSF+ +
Sbjct: 461 ----------------PRKHLRLSLDNNIGVANVETENSFKAEVSHLVSRLRNFNKFVAC 504
Query: 399 -------------------------------ENKEEFKAKLKELLRDKSDAFNSDNPEED 427
+N E+ K KLK+LLRDKSD F+S E+D
Sbjct: 505 LPFFFELQFFCFGAFLSHLNCAKVHSGFQELDNGEDLKFKLKKLLRDKSDVFSSGKGEQD 564
Query: 428 KVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYP 487
KVKLG GW+ERYYEEKF AK+ EE E R+DVVL+YTEGLCW+MHYYY GVCSW WFYP
Sbjct: 565 KVKLGATGWRERYYEEKFTAKSAEEMELIRRDVVLKYTEGLCWIMHYYYHGVCSWNWFYP 624
Query: 488 YHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPIS 547
YHYAPFASDLK LD +I FELG PFKPFNQLL V PSAS+HALP+ YR LMTDP SPI+
Sbjct: 625 YHYAPFASDLKGLDSLDIKFELGSPFKPFNQLLAVLPSASAHALPQCYRTLMTDPASPIA 684
Query: 548 DFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
DFY DFE+DMNGKRYSWQGI+KLPF+DE RLL+ +E +LT EE RRNS++ DMLFV
Sbjct: 685 DFYAADFEIDMNGKRYSWQGISKLPFVDERRLLEAAALVEKSLTNEEIRRNSVLFDMLFV 744
Query: 608 LLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSPV 667
+ SHPL+ I +L+ L +ER + E+++P LSDGMNGYI+ C GD PP F SPV
Sbjct: 745 VASHPLAELIRSLNSRTNNLSNEERATIIEKIDPGLSDGMNGYIASCGGDSQPPCFSSPV 804
Query: 668 ASMEDIMGNQVLCAIYKLPDAHK--HVTRPPAGVIFPKKIVQLEDLKPAPVLWHEDSGRR 725
MED++ N V+CAIYKLPD + +T + PKK + L DLK +LWHED RR
Sbjct: 805 EGMEDVLANHVICAIYKLPDDIRGSEITHQIPTLKIPKKTIHLVDLKAEGLLWHEDGDRR 864
Query: 726 -----PHENGRHNPHGTISGRQLGEAAHRLVANSLQHMKVDRNGYGDRMHGSPLPYAAAP 780
+ R+NP G+ISG +LG+AAHRLV ++ N D H + P A P
Sbjct: 865 RAPSKVKKIKRYNPEGSISGNRLGKAAHRLVLQTI-------NAQPDSTHINSEP-ALCP 916
Query: 781 -------YVPP-VPSYQEYGV 793
VP +P+++E G+
Sbjct: 917 NTIFQNQRVPKRIPAFRENGI 937
>gi|62318783|dbj|BAD93823.1| 5'-3' exoribonuclease 2 [Arabidopsis thaliana]
Length = 1012
Score = 892 bits (2305), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/767 (60%), Positives = 572/767 (74%), Gaps = 35/767 (4%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFRA+KDAA++AAEEE+LR+EFEREG+KLPPK DSQVFDSNVITPGTEFMA L
Sbjct: 113 MNQQRARRFRAAKDAAEAAAEEEQLREEFEREGKKLPPKVDSQVFDSNVITPGTEFMATL 172
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S AL+YYIH+RLN+DPGW+ IKVILSDANVPGEGEHKIMSY+R +N PGY+PNT HCLY
Sbjct: 173 SFALRYYIHVRLNSDPGWKNIKVILSDANVPGEGEHKIMSYIRCNKNHPGYNPNTHHCLY 232
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML+LATHE+HFSILREVVF PG++ KCFLCGQ GH AA+CEGK KRK GE +
Sbjct: 233 GLDADLIMLSLATHEIHFSILREVVFFPGEEGKCFLCGQEGHRAADCEGKIKRKTGEMLD 292
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
+ VV KKPY+F++IW LREYL+++ +IP + +L+ ++DDFIF+CFFVGNDFLPH
Sbjct: 293 NTEADVVVKKPYEFVNIWILREYLEHDMQIPGA--KKNLDRLIDDFIFICFFVGNDFLPH 350
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
MPTLEIREGAI LLM+VYK +FR+ YLTD SK +LR E FI+AVG YE++IFQKRA+
Sbjct: 351 MPTLEIREGAIELLMSVYKNKFRSAKKYLTDSSKLNLRNDERFIKAVGMYENQIFQKRAQ 410
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRL 360
+ Q +ER +R+KA+ + D+ AQ SR SG + +L
Sbjct: 411 VQQSQSERFRRDKARDKARDNARDNAQ-----------ASRQFSGK----------LVQL 449
Query: 361 DNGKGTSGRPHKVP-----RLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDK 415
D+ S H P RLS IG A VE ENS + + +N+E+ K KLK+LLRDK
Sbjct: 450 DSLDEVSDSLHSSPSRKYLRLSLDDNIGVANVETENSLKAEELDNEEDLKFKLKKLLRDK 509
Query: 416 SDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYY 475
D F S N E+DKVKL + GW+ERYYEEKF AK+ EE E+ R+DVVL+YTEGLCW+MHYY
Sbjct: 510 GDGFRSGNGEQDKVKLNKVGWRERYYEEKFAAKSVEEMEQIRRDVVLKYTEGLCWIMHYY 569
Query: 476 YEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHY 535
Y GVCSW WFYPYHYAPFASDLK L++ +I FELG PFKPFNQLL V PSAS+HALPE Y
Sbjct: 570 YHGVCSWNWFYPYHYAPFASDLKGLEKLDIKFELGSPFKPFNQLLAVLPSASAHALPECY 629
Query: 536 RKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEA 595
R LMT+P+SPI+DFYP DFE+DMNGKRYSWQGI+KLPF++E RLL+ ++E +LT EE
Sbjct: 630 RSLMTNPDSPIADFYPADFEIDMNGKRYSWQGISKLPFVEEKRLLEAAAQVEKSLTNEEI 689
Query: 596 RRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCA 655
RRNS + DMLFV+ SHPL I +L+ L +ER + E+++P LSDGMNGYI+ C
Sbjct: 690 RRNSALFDMLFVVASHPLGELIRSLNSRTNNLSNEERATIIEKIDPGLSDGMNGYIASCG 749
Query: 656 GDPHPPVFRSPVASMEDIMGNQVLCAIYKLPDAHK--HVTRPPAGVIFPKKIVQLEDLKP 713
GD P F S V MED++ NQV+CAIYKLP+ + +T + PKK + L DLK
Sbjct: 750 GDSQPSCFCSTVEGMEDVLTNQVICAIYKLPEDIRGSEITHQIPRLAIPKKTISLVDLKS 809
Query: 714 APVLWHEDSGRRPH-----ENGRHNPHGTISGRQLGEAAHRLVANSL 755
+LWHED +R + R+NP G+ISG +LG+A+HRLV ++
Sbjct: 810 GGLLWHEDGDKRRAPPKVIKIKRYNPEGSISGGRLGKASHRLVLQTI 856
>gi|334188143|ref|NP_001190450.1| 5'-3' exoribonuclease 2 [Arabidopsis thaliana]
gi|332007442|gb|AED94825.1| 5'-3' exoribonuclease 2 [Arabidopsis thaliana]
Length = 1023
Score = 890 bits (2299), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/778 (59%), Positives = 574/778 (73%), Gaps = 46/778 (5%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFRA+KDAA++AAEEE+LR+EFEREG+KLPPK DSQVFDSNVITPGTEFMA L
Sbjct: 113 MNQQRARRFRAAKDAAEAAAEEEQLREEFEREGKKLPPKVDSQVFDSNVITPGTEFMATL 172
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S AL+YYIH+RLN+DPGW+ IKVILSDANVPGEGEHKIMSY+R +N PGY+PNT HCLY
Sbjct: 173 SFALRYYIHVRLNSDPGWKNIKVILSDANVPGEGEHKIMSYIRCNKNHPGYNPNTHHCLY 232
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML+LATHE+HFSILREVVF PG++ KCFLCGQ GH AA+CEGK KRK GE +
Sbjct: 233 GLDADLIMLSLATHEIHFSILREVVFFPGEEGKCFLCGQEGHRAADCEGKIKRKTGEMLD 292
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
+ VV KKPY+F++IW LREYL+++ +IP + +L+ ++DDFIF+CFFVGNDFLPH
Sbjct: 293 NTEADVVVKKPYEFVNIWILREYLEHDMQIPGA--KKNLDRLIDDFIFICFFVGNDFLPH 350
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
MPTLEIREGAI LLM+VYK +FR+ YLTD SK +LR VE FI+AVG YE++IFQKRA+
Sbjct: 351 MPTLEIREGAIELLMSVYKNKFRSAKKYLTDSSKLNLRNVERFIKAVGMYENQIFQKRAQ 410
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRL 360
+ QR +ER +R+KA+ + D+ AQ SR SG + +L
Sbjct: 411 VQQRQSERFRRDKARDKARDNARDNAQ-----------ASRQFSGK----------LVQL 449
Query: 361 DNGKGTSGRPHKVP-----RLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDK 415
D+ S H P RLS IG A VE ENS + + +N+E+ K KLK+LLRDK
Sbjct: 450 DSLDEVSDSLHSSPSRKYLRLSLDDNIGVANVETENSLKAEELDNEEDLKFKLKKLLRDK 509
Query: 416 SDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYY 475
D F S N E+DKVKL + GW+ERYYEEKF AK+ EE E+ R+DVVL+YTEGLCW+MHYY
Sbjct: 510 GDGFRSGNGEQDKVKLNKVGWRERYYEEKFAAKSVEEMEQIRRDVVLKYTEGLCWIMHYY 569
Query: 476 YEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHY 535
Y GVCSW WFYPYHYAPFASDLK L++ +I FELG PFKPFNQLL V PSAS+HALPE Y
Sbjct: 570 YHGVCSWNWFYPYHYAPFASDLKGLEKLDIKFELGSPFKPFNQLLAVLPSASAHALPECY 629
Query: 536 RKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEA 595
R LMT+P+SPI+DFYP DFE+DMNGKRYSWQGI+KLPF++E RLL+ ++E +LT EE
Sbjct: 630 RSLMTNPDSPIADFYPADFEIDMNGKRYSWQGISKLPFVEEKRLLEAAAQVEKSLTNEEI 689
Query: 596 RRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPEL-----------S 644
RRNS + DMLFV+ SHPL I +L+ L +ER + E+++P L S
Sbjct: 690 RRNSALFDMLFVVASHPLGELIRSLNSRTNNLSNEERATIIEKIDPGLSEHIQKFLDVCS 749
Query: 645 DGMNGYISPCAGDPHPPVFRSPVASMEDIMGNQVLCAIYKLPDAHK--HVTRPPAGVIFP 702
DGMNGYI+ C GD P F S V MED++ NQV+CAIYKLP+ + +T + P
Sbjct: 750 DGMNGYIASCGGDSQPSCFCSTVEGMEDVLTNQVICAIYKLPEDIRGSEITHQIPRLAIP 809
Query: 703 KKIVQLEDLKPAPVLWHEDSGRRPH-----ENGRHNPHGTISGRQLGEAAHRLVANSL 755
KK + L DLK +LWHED +R + R+NP G+ISG +LG+A+HRLV ++
Sbjct: 810 KKTISLVDLKSGGLLWHEDGDKRRAPPKVIKIKRYNPEGSISGGRLGKASHRLVLQTI 867
>gi|13605795|gb|AAK32883.1|AF367296_1 AT5g42540/K16E1_1 [Arabidopsis thaliana]
gi|20147139|gb|AAM10286.1| AT5g42540/K16E1_1 [Arabidopsis thaliana]
Length = 813
Score = 860 bits (2223), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/724 (61%), Positives = 546/724 (75%), Gaps = 30/724 (4%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFRA+KDAA++AAEEE+LR+EFEREG+KLPPK DSQVFDSNVITPGTEFMA L
Sbjct: 113 MNQQRARRFRAAKDAAEAAAEEEQLREEFEREGKKLPPKVDSQVFDSNVITPGTEFMATL 172
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S AL+YYIH+RLN+DPGW+ IKVILSDANVPGEGEHKIMSY+R +N PGY+PNT HCLY
Sbjct: 173 SFALRYYIHVRLNSDPGWKNIKVILSDANVPGEGEHKIMSYIRCNKNHPGYNPNTHHCLY 232
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML+LATHE+HFSILREVVF PG++ KCFLCGQ GH AA+CEGK KRK GE +
Sbjct: 233 GLDADLIMLSLATHEIHFSILREVVFFPGEEGKCFLCGQEGHRAADCEGKIKRKTGEMLD 292
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
+ VV KKPY+F++IW LREYL+++ +IP + +L+ ++DDFIF+CFFVGNDFLPH
Sbjct: 293 NTEADVVVKKPYEFVNIWILREYLEHDMQIPGA--KKNLDRLIDDFIFICFFVGNDFLPH 350
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
MPTLEIREGAI LLM+VYK +FR+ YLTD SK +LR VE FI+AVG YE++IFQKRA+
Sbjct: 351 MPTLEIREGAIELLMSVYKNKFRSAKKYLTDSSKLNLRNVERFIKAVGMYENQIFQKRAQ 410
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRL 360
+ QR +ER +R+KA+ + D+ AQ SR SG + +L
Sbjct: 411 VQQRQSERFRRDKARDKARDNARDNAQ-----------ASRQFSGK----------LVQL 449
Query: 361 DNGKGTSGRPHKVP-----RLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDK 415
D+ S H P RLS IG A VE ENS + + +N+E+ K KLK+LLRDK
Sbjct: 450 DSLDEVSDSLHSSPSRKYLRLSLDDNIGVANVETENSLKAEELDNEEDLKFKLKKLLRDK 509
Query: 416 SDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYY 475
D F S N E+DKVKL + GW+ERYYEEKF AK+ EE E+ R+DVVL+YTEGLCW+MHYY
Sbjct: 510 GDGFRSGNGEQDKVKLNKVGWRERYYEEKFAAKSVEEMEQIRRDVVLKYTEGLCWIMHYY 569
Query: 476 YEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHY 535
Y GVCSW WFYPYHYAPFASDLK L++ +I FELG PFKPFNQLL V PSAS+HALPE Y
Sbjct: 570 YHGVCSWNWFYPYHYAPFASDLKGLEKLDIKFELGSPFKPFNQLLAVLPSASAHALPECY 629
Query: 536 RKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEA 595
R LMT+P+SPI+DFYP DFE+DMNGKRYSWQGI+KLPF++E RLL+ ++E +LT EE
Sbjct: 630 RSLMTNPDSPIADFYPADFEIDMNGKRYSWQGISKLPFVEEKRLLEAAAQVEKSLTNEEI 689
Query: 596 RRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCA 655
RRNS + DMLFV+ SHPL I +L+ L +ER + E+++P LSDGMNGYI+ C
Sbjct: 690 RRNSALFDMLFVVASHPLGELIRSLNSRTNNLSNEERATIIEKIDPGLSDGMNGYIASCG 749
Query: 656 GDPHPPVFRSPVASMEDIMGNQVLCAIYKLPDAHK--HVTRPPAGVIFPKKIVQLEDLKP 713
GD P F S V MED++ NQV+CAIYKLP+ + +T + PKK + L DLK
Sbjct: 750 GDSQPSCFCSTVEGMEDVLTNQVICAIYKLPEDIRGSEITHQIPRLAIPKKTISLVDLKS 809
Query: 714 APVL 717
+L
Sbjct: 810 GGLL 813
>gi|9759012|dbj|BAB09325.1| 5'-3' exoribonuclease 2 [Arabidopsis thaliana]
Length = 746
Score = 763 bits (1970), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/657 (61%), Positives = 494/657 (75%), Gaps = 43/657 (6%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFRA+KDAA++AAEEE+LR+EFEREG+KLPPK DSQVFDSNVITPGTEFMA L
Sbjct: 113 MNQQRARRFRAAKDAAEAAAEEEQLREEFEREGKKLPPKVDSQVFDSNVITPGTEFMATL 172
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S AL+YYIH+RLN+DPGW+ IKVILSDANVPGEGEHKIMSY+R +N PGY+PNT HCLY
Sbjct: 173 SFALRYYIHVRLNSDPGWKNIKVILSDANVPGEGEHKIMSYIRCNKNHPGYNPNTHHCLY 232
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML+LATHE+HFSILREV F PG++ KCFLCGQ GH AA+CEGK KRK GE +
Sbjct: 233 GLDADLIMLSLATHEIHFSILREVFF-PGEEGKCFLCGQEGHRAADCEGKIKRKTGEMLD 291
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
+ VV KKPY+F++IW LREYL+++ +IP + +L+ ++DDFIF+CFFVGNDFLPH
Sbjct: 292 NTEADVVVKKPYEFVNIWILREYLEHDMQIPGA--KKNLDRLIDDFIFICFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
MPTLEIREGAI LLM+VYK +FR+ YLTD SK +LR VE FI+AVG YE++IFQKR
Sbjct: 350 MPTLEIREGAIELLMSVYKNKFRSAKKYLTDSSKLNLRNVERFIKAVGMYENQIFQKR-- 407
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRL 360
R +ER +R+KA+ + D+ AQ SR SG + +L
Sbjct: 408 ---RQSERFRRDKARDKARDNARDNAQ-----------ASRQFSGK----------LVQL 443
Query: 361 DNGKGTSGRPHKVP-----RLSSGATIGAAIVEAENSFETDPQ---------ENKEEFKA 406
D+ S H P RLS IG A VE ENS + + +N+E+ K
Sbjct: 444 DSLDEVSDSLHSSPSRKYLRLSLDDNIGVANVETENSLKAECTKVHSGFQELDNEEDLKF 503
Query: 407 KLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTE 466
KLK+LLRDK D F S N E+DKVKL + GW+ERYYEEKF AK+ EE E+ R+DVVL+YTE
Sbjct: 504 KLKKLLRDKGDGFRSGNGEQDKVKLNKVGWRERYYEEKFAAKSVEEMEQIRRDVVLKYTE 563
Query: 467 GLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSA 526
GLCW+MHYYY GVCSW WFYPYHYAPFASDLK L++ +I FELG PFKPFNQLL V PSA
Sbjct: 564 GLCWIMHYYYHGVCSWNWFYPYHYAPFASDLKGLEKLDIKFELGSPFKPFNQLLAVLPSA 623
Query: 527 SSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKI 586
S+HALPE YR LMT+P+SPI+DFYP DFE+DMNGKRYSWQGI+KLPF++E RLL+ ++
Sbjct: 624 SAHALPECYRSLMTNPDSPIADFYPADFEIDMNGKRYSWQGISKLPFVEEKRLLEAAAQV 683
Query: 587 EHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPEL 643
E +LT EE RRNS + DMLFV+ SHPL I +L+ L +ER + E+++P L
Sbjct: 684 EKSLTNEEIRRNSALFDMLFVVASHPLGELIRSLNSRTNNLSNEERATIIEKIDPGL 740
>gi|414876882|tpg|DAA54013.1| TPA: hypothetical protein ZEAMMB73_402768 [Zea mays]
Length = 591
Score = 756 bits (1951), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/485 (79%), Positives = 425/485 (87%), Gaps = 5/485 (1%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+KDAAD+AAEEERLR+EFEREGRKLPPK SQ DSNVITPGTEFMAVL
Sbjct: 111 MNQQRSRRFRAAKDAADAAAEEERLREEFEREGRKLPPKQQSQTCDSNVITPGTEFMAVL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S+ALQYYIH RLN DPGW++IKVILSDANVPGEGEHKIMSY+R QRNL G++PNTRHCLY
Sbjct: 171 SVALQYYIHRRLNYDPGWKQIKVILSDANVPGEGEHKIMSYIRGQRNLSGFNPNTRHCLY 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIMLALATHEVHFSILREVV+TPGQQDKCFLCGQ GHLAANCEGK KRKAGEFDE
Sbjct: 231 GLDADLIMLALATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAGEFDE 290
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
KG +VPKKPYQFL+IWTLREYL+YEFR+PNPPF+ID E IVDDFIFMCFFVGNDFLPH
Sbjct: 291 KGG-AIVPKKPYQFLNIWTLREYLEYEFRMPNPPFKIDFERIVDDFIFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
MPTLEIREGAINLLMAVYKKEF ++GGYLTD P L RVEHFIQAVGSYED+IFQKRAR
Sbjct: 350 MPTLEIREGAINLLMAVYKKEFPSMGGYLTDSCTPDLSRVEHFIQAVGSYEDKIFQKRAR 409
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRL 360
LHQR AERIKREKAQA+RGDD++P + D +VP+ RF GSRLASG P PY+Q+ G
Sbjct: 410 LHQRQAERIKREKAQAKRGDDLDPHVRDDLIVPIQRFQGSRLASGAVPVPYEQN---GSH 466
Query: 361 DNGKGTSGRPHKVPRLS-SGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAF 419
+ K + R K R+S SG++I +A+VEAEN E ENKEE K+ LK+ LR+KSD F
Sbjct: 467 KDNKERNSRARKAARVSTSGSSIASALVEAENDLEAQECENKEELKSMLKDALREKSDIF 526
Query: 420 NSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGV 479
NSDNPEEDKVKLGEPGW+ERYYEEKF A+TPE+ EE R+DVVL+YTEGLCWVMHYYYEGV
Sbjct: 527 NSDNPEEDKVKLGEPGWRERYYEEKFGARTPEQIEEIRRDVVLKYTEGLCWVMHYYYEGV 586
Query: 480 CSWQW 484
CSWQW
Sbjct: 587 CSWQW 591
>gi|359490022|ref|XP_002275560.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vitis vinifera]
Length = 834
Score = 724 bits (1869), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/736 (51%), Positives = 475/736 (64%), Gaps = 62/736 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFRA+K+AAD A+ ERL+ FE E L ++ DSNVITPGTEFMA+L
Sbjct: 111 MNQQRARRFRAAKEAADDASGTERLKTVFESEMEMLALLDQTKKLDSNVITPGTEFMALL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S AL+YYIHLR+N DPGW IKVILSDANVPGEGEHKIMSY+RLQRNLPG+DPNTRHCLY
Sbjct: 171 SSALKYYIHLRMNLDPGWRGIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLY 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIMLALATHE+HFSILRE V ++DK +P + + K K GE
Sbjct: 231 GLDADLIMLALATHEIHFSILREDVHKAYRKDKN---NKPRKDSLLVNKRGKSKQGEVGG 287
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
+ E + ++ +QFL+IWTLR+YL ++ IP+ + DLE ++DDF+FMC FVGNDFLPH
Sbjct: 288 EDIEDFISRQKFQFLNIWTLRDYLAHDMSIPDRSLKTDLERLIDDFVFMCLFVGNDFLPH 347
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
MP+LEI EGAI+LLM VYKKEF +GGYLT+ S+ L RVE F+Q VGS+E+ IF+KR++
Sbjct: 348 MPSLEISEGAIDLLMTVYKKEFVQIGGYLTNSSEVYLERVERFMQVVGSHENAIFRKRSQ 407
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECV--G 358
+ Q +RG RF GS ++ + S Y + CV
Sbjct: 408 V-------------QKKRG---------------VRFQGS--SNKKTVSDYSTTPCVEPQ 437
Query: 359 RLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDA 418
+ G+S P K P +++NS +KE+ +
Sbjct: 438 GMTGSSGSSLEPRKTPFCQ----------DSKNS--------------TVKEIQCSTNCI 473
Query: 419 FNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEG 478
N DK+KLGE GWKER+Y EKF AKT ++RE R+ VL+Y EG+CWVMHYYY+G
Sbjct: 474 STGANSLVDKIKLGEDGWKERFYVEKFEAKTEDDRERVRRHAVLKYIEGICWVMHYYYQG 533
Query: 479 VCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKL 538
VCSWQWFYPYHYAPFASD+ LDQ +I F LG PFKPF+QL+GV P+AS+HALP +YRKL
Sbjct: 534 VCSWQWFYPYHYAPFASDIYGLDQLDIQFTLGKPFKPFDQLMGVLPAASAHALPLYYRKL 593
Query: 539 MTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
M D SPI DFYP DFE+DMNGKRY WQ I KLPFI E+RLL E+ K+E TLT++E RN
Sbjct: 594 MMDETSPILDFYPADFELDMNGKRYPWQAICKLPFIKESRLLAEIAKVESTLTDKEKLRN 653
Query: 599 SIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDP 658
+ D LF+ +S PL+ I++ + K +VK +++P+ S GMNGY+
Sbjct: 654 RLGMDALFIHISDPLAVKIFSFYKRKKDHPKLPMAKVKRKIDPKFSGGMNGYMYISDRPV 713
Query: 659 HPPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKPAPVLW 718
P F SP+ ME I N+V+ YK P H H+ RP GVI P K V L PVLW
Sbjct: 714 WPAEFYSPIEDMEMIAQNKVISIFYKCPSFHPHIPRPLEGVILPGKTVIKPHLLRPPVLW 773
Query: 719 HEDS---GRRPHENGR 731
HE S GR+ E R
Sbjct: 774 HETSAVCGRKFSERSR 789
>gi|297737374|emb|CBI26575.3| unnamed protein product [Vitis vinifera]
Length = 845
Score = 724 bits (1868), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/736 (51%), Positives = 475/736 (64%), Gaps = 62/736 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFRA+K+AAD A+ ERL+ FE E L ++ DSNVITPGTEFMA+L
Sbjct: 92 MNQQRARRFRAAKEAADDASGTERLKTVFESEMEMLALLDQTKKLDSNVITPGTEFMALL 151
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S AL+YYIHLR+N DPGW IKVILSDANVPGEGEHKIMSY+RLQRNLPG+DPNTRHCLY
Sbjct: 152 SSALKYYIHLRMNLDPGWRGIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLY 211
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIMLALATHE+HFSILRE V ++DK +P + + K K GE
Sbjct: 212 GLDADLIMLALATHEIHFSILREDVHKAYRKDKN---NKPRKDSLLVNKRGKSKQGEVGG 268
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
+ E + ++ +QFL+IWTLR+YL ++ IP+ + DLE ++DDF+FMC FVGNDFLPH
Sbjct: 269 EDIEDFISRQKFQFLNIWTLRDYLAHDMSIPDRSLKTDLERLIDDFVFMCLFVGNDFLPH 328
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
MP+LEI EGAI+LLM VYKKEF +GGYLT+ S+ L RVE F+Q VGS+E+ IF+KR++
Sbjct: 329 MPSLEISEGAIDLLMTVYKKEFVQIGGYLTNSSEVYLERVERFMQVVGSHENAIFRKRSQ 388
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECV--G 358
+ Q +RG RF GS ++ + S Y + CV
Sbjct: 389 V-------------QKKRG---------------VRFQGS--SNKKTVSDYSTTPCVEPQ 418
Query: 359 RLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDA 418
+ G+S P K P +++NS +KE+ +
Sbjct: 419 GMTGSSGSSLEPRKTPFCQ----------DSKNS--------------TVKEIQCSTNCI 454
Query: 419 FNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEG 478
N DK+KLGE GWKER+Y EKF AKT ++RE R+ VL+Y EG+CWVMHYYY+G
Sbjct: 455 STGANSLVDKIKLGEDGWKERFYVEKFEAKTEDDRERVRRHAVLKYIEGICWVMHYYYQG 514
Query: 479 VCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKL 538
VCSWQWFYPYHYAPFASD+ LDQ +I F LG PFKPF+QL+GV P+AS+HALP +YRKL
Sbjct: 515 VCSWQWFYPYHYAPFASDIYGLDQLDIQFTLGKPFKPFDQLMGVLPAASAHALPLYYRKL 574
Query: 539 MTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
M D SPI DFYP DFE+DMNGKRY WQ I KLPFI E+RLL E+ K+E TLT++E RN
Sbjct: 575 MMDETSPILDFYPADFELDMNGKRYPWQAICKLPFIKESRLLAEIAKVESTLTDKEKLRN 634
Query: 599 SIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDP 658
+ D LF+ +S PL+ I++ + K +VK +++P+ S GMNGY+
Sbjct: 635 RLGMDALFIHISDPLAVKIFSFYKRKKDHPKLPMAKVKRKIDPKFSGGMNGYMYISDRPV 694
Query: 659 HPPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKPAPVLW 718
P F SP+ ME I N+V+ YK P H H+ RP GVI P K V L PVLW
Sbjct: 695 WPAEFYSPIEDMEMIAQNKVISIFYKCPSFHPHIPRPLEGVILPGKTVIKPHLLRPPVLW 754
Query: 719 HEDS---GRRPHENGR 731
HE S GR+ E R
Sbjct: 755 HETSAVCGRKFSERSR 770
>gi|255557927|ref|XP_002519992.1| 5'->3' exoribonuclease, putative [Ricinus communis]
gi|223540756|gb|EEF42316.1| 5'->3' exoribonuclease, putative [Ricinus communis]
Length = 1545
Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/772 (47%), Positives = 462/772 (59%), Gaps = 102/772 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+K+A A +++Q E EG + V DSNVITPGTEFM +L
Sbjct: 111 MNQQRSRRFRAAKEAEKEAL---KMKQFIELEGENSTSLKEPAVLDSNVITPGTEFMDLL 167
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S AL+YYI LR+N D GW IKVILSD+NVPGEGEHKIMSY+RLQR+LPGYDPNTRHCLY
Sbjct: 168 SSALRYYIRLRVNRDSGWRGIKVILSDSNVPGEGEHKIMSYIRLQRDLPGYDPNTRHCLY 227
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD- 179
GLDADLIMLALATHEVHF+ILREV + G+ N + KA K ++
Sbjct: 228 GLDADLIMLALATHEVHFTILREVCAQKHSSKR----GKKHKFVWNPQKKANSKKKKWMP 283
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
K E V + ++FL+IW LRE+L+Y+ RIPN + DLE ++DDFIFMC FVGNDFLP
Sbjct: 284 VKTLEEYVSRLNFKFLYIWALREHLEYDMRIPNLALQTDLERLIDDFIFMCLFVGNDFLP 343
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+PTLEI +GAI+LLM VY+KEFR +GGYLT+ + L RVEHFIQAVG ++D IF++
Sbjct: 344 HIPTLEISQGAIDLLMKVYRKEFRRMGGYLTNSFELDLTRVEHFIQAVGLHDDAIFRQHI 403
Query: 300 RLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGR 359
+ + + R K E++ R+ +E L Q D H ++ G S
Sbjct: 404 QKLKEKSAR-KEERSSKRK---LEKLLQNDP-------HAESISGGSS-----------L 441
Query: 360 LDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQEN--KEEFKAKLKELLRDKSD 417
L G + LS+G G + E D +E ++FKAK K
Sbjct: 442 LMEKAGGMNFDEPIHHLSAGIDTG-------DKEEDDWKERYYAKKFKAKTK-------- 486
Query: 418 AFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYE 477
+E+E R+DVV++Y EGLCWVM YYYE
Sbjct: 487 ---------------------------------DEQESIRRDVVIKYMEGLCWVMRYYYE 513
Query: 478 GVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRK 537
GVCSWQWFYPYHYAPFASD LD I F LG PFKP +QL+GV P+AS+HALP YRK
Sbjct: 514 GVCSWQWFYPYHYAPFASDFYGLDDLKIQFTLGVPFKPMDQLMGVLPAASAHALPMLYRK 573
Query: 538 LMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARR 597
LMTD +SPI DFYP+DFE+DMNGKR WQ I KLPFIDE+RLL E+ K+EHTLT++E RR
Sbjct: 574 LMTDESSPILDFYPSDFELDMNGKRRKWQAICKLPFIDESRLLSEITKVEHTLTDDERRR 633
Query: 598 NSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGD 657
NS+ ++ LFV +SHPL+ I K V +++PELS GMNG++
Sbjct: 634 NSLGSNFLFVHISHPLADMIIYF------FKQNRDPNVLLKIDPELSGGMNGFVYISDNA 687
Query: 658 PHPPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKK----IVQLEDLKP 713
P SPV M I N+V+ Y+ P H H++R P GVI P K ++Q E + P
Sbjct: 688 VCPEEVSSPVDGMRMIAHNRVISVSYRYPLFHYHISRLPQGVILPGKDISPLLQHEKVVP 747
Query: 714 APVLWHEDSGRRPHENGRHNPHGTISGRQLGEAAHRLVANSLQHMKVDRNGY 765
A V S RRP ++SG L AHRLV++ + D GY
Sbjct: 748 AGV-----SSRRPIPR-------SVSGTHLANLAHRLVSSCTPIKQDDNLGY 787
>gi|145347709|ref|XP_001418304.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578533|gb|ABO96597.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 802
Score = 603 bits (1555), Expect = e-169, Method: Compositional matrix adjust.
Identities = 348/733 (47%), Positives = 448/733 (61%), Gaps = 65/733 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR++++A + A EEE+LR++ REG K+ PK +S VFDSNVITPGT FM L
Sbjct: 111 MNQQRSRRFRSAQEAREKAEEEEKLREKLIREGVKVQPKQESGVFDSNVITPGTPFMGRL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S AL+YY+H +LNNDPGW I+VI SDA+VPGEGEHK M Y+R QR LPG +PNTRH +Y
Sbjct: 171 SEALKYYVHDKLNNDPGWRGIEVIFSDASVPGEGEHKAMHYIRQQRGLPGANPNTRHVVY 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIMLALATHE HF ILRE+VF + P L E K+
Sbjct: 231 GLDADLIMLALATHEPHFWILREIVFQKKDNEA------PQTLGLGTEETKKK------- 277
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNP-PFEIDLECIVDDFIFMCFFVGNDFLP 239
V + +KPYQ L + LREYL + R P PF++D E + DDFIFMCFFVGNDFLP
Sbjct: 278 ----VAIARKPYQLLSVSVLREYLALDMRPVAPTPFKLDPERMFDDFIFMCFFVGNDFLP 333
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H PTLEIREGAI+LLM +Y+ LGGYL +P+L VE F++ V +ED IFQKRA
Sbjct: 334 HSPTLEIREGAIDLLMTLYRNCLPTLGGYLCADGRPNLSIVEKFVRLVSEHEDAIFQKRA 393
Query: 300 RLHQRHAERIKREKAQA-------RRGDDVEPLAQPDSLVPVSR-FHGSRLASGPSPS-P 350
+ R +R+K +A R+G VP R GSR AS +P+ P
Sbjct: 394 KKEARMRSSRQRDKQKAKDYYERQRKGSGTN--------VPQHRVLGGSRNASDRAPAAP 445
Query: 351 YQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKE 410
+Q +GR G+P P A AEN D +E K + K
Sbjct: 446 TEQLVALGR--------GKPTPPP--------SAPKTAAENKSAADAL--RERLKTRGKR 487
Query: 411 LLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCW 470
+DA E D ++LGE GWK+RYYE K A TP+ R+E + +V+ Y GL W
Sbjct: 488 AAEATADAMGEREEETDNIRLGESGWKDRYYEAKMQA-TPQTRDEIIRGMVIEYVRGLIW 546
Query: 471 VMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHA 530
V YY+EG CSW WFYPYHYAPFASDL DL + F+LG PFKPF+QL+GV P+ASSHA
Sbjct: 547 VCRYYFEGCCSWSWFYPYHYAPFASDLYDLSTISTDFDLGKPFKPFSQLMGVLPAASSHA 606
Query: 531 LPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTL 590
LP + LM+D +SPI DFYP DF +DMNGKR++WQ +A LP+ID RLL++ + +E+TL
Sbjct: 607 LPAAFAPLMSDKDSPIIDFYPEDFALDMNGKRFTWQAVALLPWIDANRLLEQTEMLEYTL 666
Query: 591 TEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGY 650
T EE RRNSI + ++V +HPL+ L+E + K +++P+LS GMN
Sbjct: 667 TAEEKRRNSINEEEIYVNAAHPLAKQFLELEEREDEDVEKTL-----KMDPKLSKGMNAT 721
Query: 651 ISPCAGDPHPPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPA---GVIFPKKIVQ 707
+ D P + SP++S +DI N+V+ A +LP + V PP G + P +V
Sbjct: 722 LVSVKRDAQPTMIPSPMSSRQDISNNKVVVASMRLP-TDRFV--PPVLMPGAVLPTPMVT 778
Query: 708 LEDLKPAPVLWHE 720
DL P P L+H+
Sbjct: 779 EADLPPPPQLFHQ 791
>gi|255565761|ref|XP_002523870.1| 5'->3' exoribonuclease, putative [Ricinus communis]
gi|223536958|gb|EEF38596.1| 5'->3' exoribonuclease, putative [Ricinus communis]
Length = 993
Score = 600 bits (1546), Expect = e-168, Method: Compositional matrix adjust.
Identities = 330/743 (44%), Positives = 441/743 (59%), Gaps = 95/743 (12%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR +KD + AEEERLR+E+E +G+++ PK S+V DSN+ITPGTEFM L
Sbjct: 92 MNQQRSRRFRNAKDTEIAEAEEERLRKEYEIQGKQVLPKQYSEVSDSNIITPGTEFMFTL 151
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
SI LQ Y+ +N+DP W+ IKVILSDA+VPGEGEHKIMS++R QR LP Y+PNTRHCLY
Sbjct: 152 SIKLQEYMISNINSDPAWKAIKVILSDASVPGEGEHKIMSFIRQQRMLPDYNPNTRHCLY 211
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCF-----LCGQP--GHLAANCEGKAKR 173
GLDADLIMLALA+HEVHFSILREVV Q C L G+ G ++ E K KR
Sbjct: 212 GLDADLIMLALASHEVHFSILREVVLLQQPQSICLSAHTSLQGRIEFGEFGSS-ENKTKR 270
Query: 174 KAGEFDEK-GDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPP--FEIDLECIVDDFIFMC 230
+ D +V +KPYQFLH+W LR+YL E I +PP F D E I+DDF+FMC
Sbjct: 271 RFSNDDNTLAKDVSFIEKPYQFLHVWILRDYLKLEMDIYDPPENFTFDSERIIDDFVFMC 330
Query: 231 FFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPS--------LRRVEH 282
FF GNDF+P++PTL+I E A++LLM VYKK F+ LGGYL D + + L+RVE
Sbjct: 331 FFAGNDFIPNLPTLQIHERAVDLLMTVYKKNFKKLGGYLVDVHQVNSLKNDYLDLKRVEK 390
Query: 283 FIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRL 342
FI +G+YE+ IF+KR+ L +R ++ + + A +++ + D L ++
Sbjct: 391 FILLIGAYEEMIFKKRSELRERMLRKLC-QHSDAANAKELDGNVEQDML---------KI 440
Query: 343 ASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKE 402
+ + Q SE + ++ A + S +N +
Sbjct: 441 SFSSLDAKAQISEDL----------------------VSVSAVSI----SLWFSVLQNTK 474
Query: 403 EFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVL 462
FK +LK LR KSD F + D VKLG GWK+RYYE+KF+A+ P + E RK++V
Sbjct: 475 RFKEELKARLRQKSDLFQNGGFRADTVKLGTTGWKKRYYEQKFSAENPSDIELIRKEMVQ 534
Query: 463 RYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGV 522
+YTEGL WV+ YY+ V SW WFYPYH+APFASD+K + Q F G PFKPF+QL+GV
Sbjct: 535 KYTEGLLWVLGYYFSAVPSWTWFYPYHHAPFASDMKGMAQVKFKFPKGSPFKPFDQLMGV 594
Query: 523 FPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDE 582
P S+HALP+ YR+LM D S I DFYP +F++D++GKR+ WQGI KLPFIDE RLL E
Sbjct: 595 LPPRSAHALPKSYRQLMIDERSSIIDFYPAEFQIDIDGKRFMWQGICKLPFIDEERLLAE 654
Query: 583 VKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPE 642
KK+E LT +EA +N D LFV + + + L + K+ VE+K
Sbjct: 655 TKKMEKELTRKEADKNVENVDKLFVRRENFSESQLLQLVSEFAAGRPKDMVEIK------ 708
Query: 643 LSDGMNGYISPCAGDPHPPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFP 702
N + C +++LP + + RP GV +P
Sbjct: 709 ---------------------------------NSLRCLLFELPKGSQFIPRPLEGVKYP 735
Query: 703 KKIVQLEDLKPAPVLWHEDSGRR 725
++I+ +D+ LWHE G R
Sbjct: 736 EQIIGDDDIMETQ-LWHECPGSR 757
>gi|440792617|gb|ELR13826.1| exoribonuclease, putative [Acanthamoeba castellanii str. Neff]
Length = 1110
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 334/796 (41%), Positives = 448/796 (56%), Gaps = 93/796 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRF+A K++ + A +E + QE R G+++PPK D FDSN ITPGT FMA +
Sbjct: 1 MNQQRSRRFKAIKESKEKAEKEAEIVQEMIRMGKEIPPKEDKPHFDSNTITPGTPFMAKV 60
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ +LQYYI RL DPGW+ IKVILSDA+VPGEGEHKIM Y+R QR+ P Y+PNT H LY
Sbjct: 61 AQSLQYYIKERLLTDPGWKGIKVILSDASVPGEGEHKIMDYIRYQRSQPEYEPNTSHVLY 120
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIMLALATHE HF ILRE+V ++ CF+CGQPGHLA++C+GKAK K + D
Sbjct: 121 GLDADLIMLALATHEPHFFILREIVMQ-ANENNCFICGQPGHLASDCQGKAKEKGNDTDT 179
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNP---PFEIDLECIVDDFIFMCFFVGNDF 237
K +KP+QFL++ LREYL + + PFE DLE I+DDF+FMCFFVGNDF
Sbjct: 180 KA----AIRKPFQFLYVSVLREYLTRDLKPSQAQQLPFEFDLERIIDDFVFMCFFVGNDF 235
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
LPH+PTLEIRE AI++L+ +YK+ LGGYLT + LRRV+ ++ VG ED I +
Sbjct: 236 LPHLPTLEIRENAIDMLVRIYKRILPTLGGYLTHDGEVDLRRVKVLMEEVGRLEDSILVE 295
Query: 298 RARLHQR-HAERIKREKAQARRGDDVEP-LAQPDSLVPVSRFHGSRLASGPSPSPYQQSE 355
R R QR R + + + R+ +D+E +A P Q++
Sbjct: 296 RRRKEQRAKENRRRGRERRKRQREDLENFIANPKD---------------------QEAN 334
Query: 356 CVGR----LDNGKGTSGRPHKVPRLSS------GATIGAAIVEAENSFETDPQENKEEFK 405
G+ + GK P + ++ G G E E E P +
Sbjct: 335 TGGKRAKHFEAGKEELITPSNLDAAAALKKQLFGDDDGTTQTETEMVTEKKPPAEIQSAS 394
Query: 406 AKLKELLRDKSDAFNSDNPE---EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVL 462
A K + + + D E D V+LG+PGWKERYY+ KF+ + + +E K V +
Sbjct: 395 AAYKTAIAAQGKPRDPDEEEPEIPDDVRLGDPGWKERYYKLKFDVEITD--KEFIKKVAM 452
Query: 463 RYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGV 522
YTEGL WV+ YYY+G SW WFYP+HYAPFA D+ +D + ELG PFKPF QL+GV
Sbjct: 453 EYTEGLVWVLRYYYQGCSSWGWFYPFHYAPFADDMTLIDDESPKHELGKPFKPFEQLMGV 512
Query: 523 FPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDE 582
P+ S LP + +M P SPI DFYP DF +DMNGKR++WQ +A LPFIDE RL +
Sbjct: 513 LPAESGTCLPMKCQVMMRHPQSPIIDFYPNDFALDMNGKRWAWQAVALLPFIDENRLKEV 572
Query: 583 VKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEH------------------- 623
+K+ E + EE RN + ++FV SHPL+++ L++
Sbjct: 573 MKECEPHFSAEEQERNKLGNHLIFVHASHPLASTFKALEDDSLAPAAATPAEGDSVAYLS 632
Query: 624 -CKQLKIKERVEVKER-----------LNPELSDGMNGYISPCA--GDPHPPVFRSPVAS 669
Q + K V ++ + +LS G+ G++S P +SP+
Sbjct: 633 ATPQEETKSAVPSNDQEPIEHMGKKLPIPADLSGGLTGFLSRTEKFSTPIGGTIQSPLNV 692
Query: 670 MEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKPAPVLWHED-SGRRPHE 728
M D+ NQ CA Y P P +FP K++ + PAP+L ED S RR +
Sbjct: 693 MPDVKNNQSYCAFYHYPAV-------PKDYVFPAKLLPNVTM-PAPILTEEDLSDRRQMQ 744
Query: 729 NGRHNPHGTISGRQLG 744
R GR +G
Sbjct: 745 ISREG-----VGRVMG 755
>gi|258563400|ref|XP_002582445.1| 5'-3' exoribonuclease 2 [Uncinocarpus reesii 1704]
gi|237907952|gb|EEP82353.1| 5'-3' exoribonuclease 2 [Uncinocarpus reesii 1704]
Length = 1028
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 313/764 (40%), Positives = 442/764 (57%), Gaps = 71/764 (9%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGR-----KLPPKSDSQVFDSNVITPGTE 55
MNQQRSRRFR++++A ++ ++ + ++ R +L + ++ +DSNVITPGT
Sbjct: 111 MNQQRSRRFRSAQEAKEADEKKAEFAKLLRKQNRGKGDTELAEEVVNKTWDSNVITPGTP 170
Query: 56 FMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNT 115
FM +LS AL+Y++ +LN DP WEK+K+I+SDA VPGEGEHKIM ++R QR+ +DPNT
Sbjct: 171 FMDILSAALRYWVAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFIRSQRSCSEHDPNT 230
Query: 116 RHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRK 174
RH +YGLDADLIML L THE HF +LRE V F + C LCGQ GH+A C GKAK K
Sbjct: 231 RHVIYGLDADLIMLGLGTHEPHFRVLREDVFFQESKARTCRLCGQQGHVAEACTGKAKEK 290
Query: 175 AGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVG 234
+GEFDEK + P KP+ +LH+ LREYL E +PN PF DLE +DD++FMCFFVG
Sbjct: 291 SGEFDEK--QKGSPLKPFIWLHVSVLREYLAAEMFVPNQPFPFDLERALDDWVFMCFFVG 348
Query: 235 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI 294
NDFLPH+P+LEIRE I+ L+A+++ +GGYLT L+R + +Q + ED I
Sbjct: 349 NDFLPHLPSLEIRENGIDTLIAIWRDNIPLMGGYLTKDGHVDLKRAQLILQGLAKQEDAI 408
Query: 295 FQKRARLHQRHAERIKREKAQARRGDDVEPLAQP------DSLVPVSRFHGSRLASGPS- 347
F++R + +R KR K Q R+ + P +P D +P SR P+
Sbjct: 409 FRRRRQTEERRNANAKRRKEQERQRAEENPRKRPRKSLDNDMSMPSSRRGKEMDGGAPAD 468
Query: 348 -----PS----PYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQ 398
PS P + E + +G + + + S+ A + + ++ + ++
Sbjct: 469 MPLFIPSKGQLPRAERELTHAMVVNRGAVYKANMANK-SAAAALKSQLISGSENGTSNVD 527
Query: 399 ENKEEFKA---KLKELLRDKSDAFNSDNPEE----------------DKVKLGEPGWKER 439
N E A K L + K+DA +D E D V+L E G+ +R
Sbjct: 528 VNVESSIASSTKASPLGKRKADALEADTTTEQENSEKPPADEDQLPEDSVRLWEQGYADR 587
Query: 440 YYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKD 499
YYE+KFN + E R V Y EGLCWV+ YY++G SW W+YPYHYAPFA+D D
Sbjct: 588 YYEQKFNVDPKDI--EFRHKVAKSYVEGLCWVLLYYFQGCPSWTWYYPYHYAPFAADFVD 645
Query: 500 LDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMN 559
LDQ +I F G PF+PF QL+GV P+AS+HA+P+ +R LM+DP S I DFYP DF +D+N
Sbjct: 646 LDQMDIQFNKGKPFRPFEQLMGVLPAASNHAIPDIFRDLMSDPASEIIDFYPEDFPIDLN 705
Query: 560 GKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPL----SA 615
GK+++WQG+A LPFIDE RLL + K H LTE E RN + D LF+ HPL A
Sbjct: 706 GKKFAWQGVALLPFIDEKRLLAAMAKRYHRLTEAERARNEMGRDTLFISDRHPLYKDIVA 765
Query: 616 SIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYIS-PCAGDPHPPVFRSPVASMEDIM 674
+ Y+ + LK+ RV S+G+ G + A PH S VA++ D+
Sbjct: 766 NFYSKKQGVPNLKLNMRV----------SEGLGGEVERDGAYIPH----SSLVAAINDVE 811
Query: 675 -----GNQVLCAIYKLPDA-HKHVTRPPAGVIFPKKIVQLEDLK 712
++ + +Y +P + H H + GV+F ++ D++
Sbjct: 812 LPSLDQDRSISVLYDIPKSIHTHKSMLLRGVVFNPPVLDRTDIE 855
>gi|357471609|ref|XP_003606089.1| 5'-3' exoribonuclease [Medicago truncatula]
gi|355507144|gb|AES88286.1| 5'-3' exoribonuclease [Medicago truncatula]
Length = 866
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 319/741 (43%), Positives = 420/741 (56%), Gaps = 121/741 (16%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR KD EEERLR+EFE EG+++ PK + +V DSN+ITPGT+FM +
Sbjct: 100 MNQQRTRRFRNVKDDEMREVEEERLRKEFEMEGKQVLPKQECEVSDSNIITPGTDFMHQI 159
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S AL+ YI ++++DP W+ I VILSDANVPGEGEHK+MS++R QR LP YDPNT HCLY
Sbjct: 160 SNALKSYISSKISSDPLWKGIMVILSDANVPGEGEHKVMSFIRKQRGLPDYDPNTVHCLY 219
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML L+ HE HFSILREV+ P +
Sbjct: 220 GSDADLIMLGLSCHEPHFSILREVILDPPDRY---------------------------- 251
Query: 181 KGDEVVVPKKPYQF--LHIWTLREYLDYEFRIPNPP--FEIDLECIVDDFIFMCFFVGND 236
E + P P +F LHIW LREYL+ E +I +PP F DLE IVDDFIF+CFF GND
Sbjct: 252 ---EKLPPNAPMRFKLLHIWLLREYLEIEMKIEDPPKNFVFDLERIVDDFIFICFFSGND 308
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTD--------GSKPSLRRVEHFIQAVG 288
FLPH+P+L I E AI+LLM VYKKEF +GGYL D G+ L RVE F+ VG
Sbjct: 309 FLPHLPSLYIHEDAIDLLMTVYKKEFSKIGGYLVDINKIGEKHGAYVKLSRVEKFVLMVG 368
Query: 289 SYEDRIFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSP 348
+YE++IF KR + + R+ + +++ E L D +
Sbjct: 369 TYEEKIFSKRTAIRDKKLRRLISDNENSKQ----EELNSHDCM----------------- 407
Query: 349 SPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQ------ENKE 402
DN + + I +AE S PQ +N +
Sbjct: 408 ----------DFDN--------------ENSSNCALRIKKAEASDNVCPQSDEEILKNTK 443
Query: 403 EFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVL 462
+ K KLK+ ++DK D F S + DK+KLG G+KERYY+EKF+ + E RK++V
Sbjct: 444 DLKEKLKKCIKDKGDLFKSGDFLTDKIKLGNVGFKERYYKEKFSVEGSTNIELKRKEIVQ 503
Query: 463 RYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGV 522
+YTEGL WV+ YY+ GV SW WFYPYHY PF SDLK + Q ++FE G PF PF+QLL V
Sbjct: 504 KYTEGLLWVLQYYFSGVASWTWFYPYHYGPFVSDLKGMAQVRVNFEKGVPFLPFDQLLSV 563
Query: 523 FPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDE 582
P S++ALP+ Y +LM D S I D Y DFE+D+ GKR+ WQG+ KLP++DE RLL E
Sbjct: 564 LPQKSAYALPKAYAQLMLDEQSKIFDLYSQDFEIDIEGKRFMWQGVCKLPYMDEKRLLTE 623
Query: 583 VKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPE 642
+++++ L+E EA+RNS+ D L V + L+ I +L + +L+
Sbjct: 624 TRELKNELSESEAKRNSVEVDRLLVSGTTKLAEKICSLKLN--------------KLDTS 669
Query: 643 LSDGMNGYISPCAGDPHPPVFRSPVASMEDIMGNQVLCAIYKLP-DAHKHVTRPPAGVIF 701
+SDG+ G IS C H V + EDI V C Y+ P HV GV
Sbjct: 670 ISDGIGGIISLC----HECVENN---KHEDI----VFCVKYEHPVGGTSHVQHLLCGVNL 718
Query: 702 PKKIVQLEDLKPAPVLWHEDS 722
P+K + D+ VLWH+ S
Sbjct: 719 PEKTIFENDINET-VLWHDQS 738
>gi|326488040|dbj|BAJ89859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 540
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 297/526 (56%), Positives = 348/526 (66%), Gaps = 56/526 (10%)
Query: 408 LKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEG 467
LK LRDKSD FNS+NPEEDK+KLGEPGW+ERYYE+KF A+TPE+ EE R+DVVL+YTEG
Sbjct: 2 LKVALRDKSDLFNSENPEEDKIKLGEPGWRERYYEDKFGARTPEQIEEIRRDVVLKYTEG 61
Query: 468 LCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSAS 527
LCWVMHYYYEGVCSWQWFYPYHYAPFASDLK L Q NI+FELG PFKPF+QL+GVFP+AS
Sbjct: 62 LCWVMHYYYEGVCSWQWFYPYHYAPFASDLKGLGQLNITFELGSPFKPFDQLMGVFPAAS 121
Query: 528 SHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIE 587
SHALP YR+LMTDP+SPI DFYP DFEVDMNGKR+SWQGIAKLPFIDE RLL E+KK+E
Sbjct: 122 SHALPVQYRQLMTDPSSPIIDFYPIDFEVDMNGKRFSWQGIAKLPFIDEDRLLSEIKKVE 181
Query: 588 HTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGM 647
HTLT EEARRNS M +MLFV +HP+S IY+L L K+R E+KE+L+P S GM
Sbjct: 182 HTLTPEEARRNSTMYNMLFVNGAHPISPYIYSLSSKFGHLADKDRNEIKEQLDPSASGGM 241
Query: 648 NGYISPCAGDPHPPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQ 707
NGYIS C GDP PPVFRSPV +EDIM NQV+C+IYKLPD HKH+ RPP GVI PKK+V+
Sbjct: 242 NGYISLCGGDPSPPVFRSPVDGLEDIMDNQVICSIYKLPDPHKHIARPPVGVIIPKKVVE 301
Query: 708 LEDLKPAPVLWHEDSGRRPHE--------NGRHNPHGTISGRQLGEAAHRLVANSLQHMK 759
DLKP PVLWHED+GRRP + + R NP G+I G QLGEAAHRLVANSL
Sbjct: 302 AGDLKPPPVLWHEDNGRRPQDNNRRNFNNSSRQNPAGSIQGHQLGEAAHRLVANSL---N 358
Query: 760 VDRNG-------YGDRMHGSPLPYAAAPYVPPVPSYQEYGVYDQGYNRFSQPRTDSYPAG 812
V G Y M+G P P + Q G S P + P+G
Sbjct: 359 VRGGGQYSPARPYQTIMNGMHYPNGMPPRM-----QQPAGRSGWHVPSDSLPNGQAVPSG 413
Query: 813 HSQSSISAAQPPYDGGYSQHYASNTSHHPNRRYHPQYDRNSSGEHPTHLYNPSGIHQNGG 872
H + + G Q YA ++ + D +G H PSG HQN
Sbjct: 414 HQYTRDNR-------GRQQPYARDS----------RSDSRGAGRH------PSGYHQN-- 448
Query: 873 PRYPPRPMGSTSSGANLYPPQGGYSGYQSPAAGSFNQWGGANQSMP 918
S + ++ PP G+ Y P + + GGA Q P
Sbjct: 449 --------SSNAYSSHTAPPSSGFGRYGQPPSYAGVYGGGAYQPAP 486
>gi|147793034|emb|CAN59715.1| hypothetical protein VITISV_006076 [Vitis vinifera]
Length = 1102
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 301/630 (47%), Positives = 384/630 (60%), Gaps = 96/630 (15%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFRA+K+AAD A+ ERL+ FE E L ++ DSNVITPGTEFMA+L
Sbjct: 242 MNQQRARRFRAAKEAADDASGTERLKTVFESEMEMLALLDQTKKLDSNVITPGTEFMALL 301
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S AL+YYIHLR+N DPGW IKVILSDANVPGEGEHKIMSY+RLQRNLPG+DPNTRHCLY
Sbjct: 302 SSALKYYIHLRMNLDPGWRGIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLY 361
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIMLALATHE+HFSILRE V ++DK +P + + K GE
Sbjct: 362 GLDADLIMLALATHEIHFSILREDVHKAYRKDK---NNKPRKDSLLVNKRGXSKQGEVGG 418
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
+ E + ++ +QFL+IWTLR+YL ++ IP+ + DLE ++DDF+FMC FVGNDFLPH
Sbjct: 419 EDIEDFISRQKFQFLNIWTLRDYLAHDMSIPDRSLKTDLERLIDDFVFMCLFVGNDFLPH 478
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
MP+LEI EGAI+LLM VYKKEF +GGYLT+ S+ L RVE F+Q VGS+E+ IF+KR++
Sbjct: 479 MPSLEISEGAIDLLMTVYKKEFVQIGGYLTNSSEVYLERVERFMQVVGSHENAIFRKRSQ 538
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECV--G 358
+ Q +RG RF GS ++ + S Y + CV
Sbjct: 539 V-------------QKKRG---------------VRFQGS--SNKKTVSDYSTTPCVEPQ 568
Query: 359 RLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDA 418
+ G+S P K P I + F E+F+AK ++
Sbjct: 569 GMTGSSGSSLEPRKTPFCQDSKNIKLGEDGWKERFYV------EKFEAKTED-------- 614
Query: 419 FNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEG 478
+RE R+ VL+Y EG+CWVMHYYY+G
Sbjct: 615 ---------------------------------DRERVRRHAVLKYIEGICWVMHYYYQG 641
Query: 479 VCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSA----SSHALPEH 534
VCSWQWFYPYHYAPFASD+ LDQ +I F LG PFKPF+QL+GV P+A S+HALP +
Sbjct: 642 VCSWQWFYPYHYAPFASDIYGLDQLDIQFTLGKPFKPFDQLMGVLPAARCTYSAHALPLY 701
Query: 535 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEAR--------LLDEVKKI 586
YRKLM D SPI DFYP DFE+DMNGKRY WQ + + P +D +R + + +
Sbjct: 702 YRKLMMDETSPILDFYPADFELDMNGKRYPWQ-LGETPCLDFSRASMIAQPVWMFVLAIL 760
Query: 587 EHTLTEEEARRNSIMADMLFVLLSHPLSAS 616
+ E EA S++ ML ++ P + +
Sbjct: 761 LKAVREYEAAYASVVI-MLLCIVVDPFATT 789
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 96/207 (46%), Gaps = 23/207 (11%)
Query: 563 YSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDE 622
Y I KLPFI E+RLL E+ K+E TLT++E RN + D LF+ +S PL+ I++ +
Sbjct: 803 YFMHAICKLPFIKESRLLAEIAKVESTLTDKEKLRNRLGMDALFIHISDPLAVKIFSFYK 862
Query: 623 HCK------QLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSP---------V 667
K K+K +++ K RL P+ N ++ P+ S
Sbjct: 863 RKKDHPKLPMAKVKRKIDPKFRLTPQTQALQNLTVTTSKLPYALPLISSNELSKVSAGRY 922
Query: 668 ASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKPAPVLWHEDS---GR 724
A + + Q + + + + P + +++ L+P PVLWHE S GR
Sbjct: 923 AYVPXVQRTQADXGGLRWFKSQPTICKLP-NLELLHTVIKPHLLRP-PVLWHETSAVCGR 980
Query: 725 RPHENGRHNPHGTISGRQLGEAAHRLV 751
+ E N ++SG L + AHRLV
Sbjct: 981 KFSERPIPN---SVSGPCLAKLAHRLV 1004
>gi|432946152|ref|XP_004083793.1| PREDICTED: 5'-3' exoribonuclease 2-like [Oryzias latipes]
Length = 972
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 312/724 (43%), Positives = 430/724 (59%), Gaps = 49/724 (6%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ + E++R+R+E + G LPP+ + FDSN ITPGTEFM L
Sbjct: 111 MNQQRSRRFRASKEGVELVDEKQRMREEIIQRGGYLPPEEIKERFDSNCITPGTEFMDNL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YY+ RL+NDPGW+ + V LSDA+VPGEGEHKIM ++R QR P +DPNT HCL
Sbjct: 171 AHCLRYYVAERLSNDPGWKNVVVFLSDASVPGEGEHKIMDFIRRQRAQPNHDPNTHHCLC 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LCGQ GH +C+G A+ K G+ DE
Sbjct: 231 GADADLIMLGLATHEPNFTIIRE-EFKPNKPRPCSLCGQTGHEMKDCQGVAREKQGQHDE 289
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + V ++ + F+ + LREYL+ E + + PF D E VDD++FMCFFVGNDFLPH
Sbjct: 290 FADTMPVSEQEFIFIRLCVLREYLERELTMASLPFPFDFERSVDDWVFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIREGAI+ L+ +YK GGYLT +L RVE +QAVG ED IF+KR
Sbjct: 350 LPSLEIREGAIDRLVNIYKDVVHKTGGYLTQNGYVNLERVEMIMQAVGVAEDNIFKKR-- 407
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRL 360
+ E +R + R+ VE Q + + +F L P P Q
Sbjct: 408 --KEDEENFRRRNKEKRKRMKVE--QQGPAYLTTGQFAPQALGRRDVPEPIQ-------- 455
Query: 361 DNGKGTSGRPHKVPRL---SSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSD 417
N + + PR + A A++ E S + E+++ + + K++
Sbjct: 456 -NARHQAYDMRMNPREQNNKNAAQSLKAMLRNEGSSSSGANESQD------RRAPKRKAE 508
Query: 418 AFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYE 477
+SD ED V+L E GWK+RYY+ KF+ + + RK VV Y EGLCWV+ YYY+
Sbjct: 509 DSDSDPEPEDNVRLWEDGWKQRYYKNKFDVDVTD--SDFRKKVVQSYVEGLCWVLRYYYQ 566
Query: 478 GVCSWQWFYPYHYAPFASDLKDLDQFNISFEL-GHPFKPFNQLLGVFPSASSHALPEHYR 536
G SW+W++P+HYAPFASD KD+ + FE PFKP QL+ VFP+AS + LP +R
Sbjct: 567 GCASWKWYFPFHYAPFASDFKDIKEMFTEFEKDTMPFKPLEQLMSVFPAASGNFLPPTWR 626
Query: 537 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 596
LM P S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL + ++ LT EEAR
Sbjct: 627 NLMVSPESSIIDFYPDDFAIDLNGKKYAWQGVALLPFVDERRLRAALAEVYPDLTPEEAR 686
Query: 597 RNSIMADMLFVLLSHPLSASIYTL-DEHCKQLKIKERVEVKERLNPELSDGMNGYI---- 651
RNS+ +D+LFV SHPL I+ L + C + + + PEL G+ G +
Sbjct: 687 RNSLGSDVLFVGKSHPLYDFIHELYRDECNKGTV---------VPPELCFGIQGLLNLDN 737
Query: 652 SPCAGDPHPPVFRSPVASMEDIMGNQVLCAIYKLPD-AHKHVTRPPAGVIFPKKIVQLED 710
+P P PV +SP+ ++ DI + + +K P+ A +V + V+ P + +
Sbjct: 738 NPVL--PDKPV-KSPIPTLRDISQSTAVSVKFKDPEFAVGYVFK---AVLLPGAKIPTKV 791
Query: 711 LKPA 714
LKP
Sbjct: 792 LKPG 795
>gi|410954455|ref|XP_003983880.1| PREDICTED: 5'-3' exoribonuclease 2 [Felis catus]
Length = 1093
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 333/789 (42%), Positives = 448/789 (56%), Gaps = 71/789 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 250 MNQQRSRRFRASKEGMEAAVEKQRVREEILSKGGFLPPEEIKERFDSNCITPGTEFMDNL 309
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 310 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 369
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 370 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDE 428
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 429 LADSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPH 488
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIREGAI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 489 LPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKD 548
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSE 355
R K ++ + +R +P P ++ GS++AS P + Y+
Sbjct: 549 DEDSFRRRQKEKRKRMKRD---QPAFSPGGILTPHALGSRNSPGSQVASNPRQAAYEM-- 603
Query: 356 CVGRLDNGKGTSGRPH-KVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRD 414
R+ N S P+ S + IG +AE+S
Sbjct: 604 ---RMQNNSSPSVSPNTSFTSDGSPSPIGGIKRKAEDS---------------------- 638
Query: 415 KSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 474
+S+ ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ Y
Sbjct: 639 -----DSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRY 691
Query: 475 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPE 533
YY+G SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP
Sbjct: 692 YYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPP 751
Query: 534 HYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEE 593
+RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT E
Sbjct: 752 SWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPE 811
Query: 594 EARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISP 653
E +RNS+ D+LFV HPL I L Q E V+V PEL GM G S
Sbjct: 812 ETKRNSLGGDVLFVGKHHPLHDFILEL----YQTGSTEPVDVP----PELCHGMQGKFSL 863
Query: 654 CAGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHVTRPPAGVIFPKKIVQLEDL 711
P + SPV + D+ N + +K P A ++ + V+ P
Sbjct: 864 DEEAVLPDQIVCSPVPMLRDLAQNTAISINFKDPQFAEDYIFK---AVMLPGA------R 914
Query: 712 KPAPVLWHEDSGRRPHENGRH-NPHGTISGRQ----LGEAAHRLVANSLQHMKVDRNGYG 766
KPAPVL D + NGR P S + L +AA R + S H+ +G G
Sbjct: 915 KPAPVLKPSDWEK--SSNGRQWKPQLGFSRDRRPVHLDQAAFRTLGVSGSHVMPRGSGAG 972
Query: 767 DRMHGSPLP 775
+ +P P
Sbjct: 973 VYGNAAPPP 981
>gi|301620220|ref|XP_002939479.1| PREDICTED: 5'-3' exoribonuclease 2 [Xenopus (Silurana) tropicalis]
gi|89271859|emb|CAJ82319.1| 5'-3' exoribonuclease 2 [Xenopus (Silurana) tropicalis]
Length = 931
Score = 547 bits (1409), Expect = e-152, Method: Compositional matrix adjust.
Identities = 321/774 (41%), Positives = 442/774 (57%), Gaps = 72/774 (9%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ +S+ E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 111 MNQQRSRRFRASKEGVESSEEKQRIREEVLSKGGYLPPEEVKERFDSNCITPGTEFMDNL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+VPGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 171 AKCLRYYIADRLNNDPGWKNLTVILSDASVPGEGEHKIMDYIRRQRAQPHHDPNTHHCLC 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LCGQ GH C+G + K GE DE
Sbjct: 231 GADADLIMLGLATHEPYFTIIRE-EFKPNKPKPCGLCGQFGHEIKECQGMPREKKGEHDE 289
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D ++ + F+ + LREYL+ E + + PF+ D E VDD++FMCFFVGNDFLPH
Sbjct: 290 FADTPPGCEQEFIFIRLNVLREYLEKELTMASLPFQFDFERSVDDWVFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIREGAI+ L+ +YK GGYLTD +L RV+ + AVG ED IF+KR +
Sbjct: 350 LPSLEIREGAIDRLVNIYKNVVHKTGGYLTDSGFVNLERVQMIMLAVGEVEDNIFKKR-K 408
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRL 360
H +R ++E+ + + + +P S V +F +P Q C
Sbjct: 409 EDDEHFKRRQKERKKRMKAEHQKP-----SFVTSGQF---------APRALGQGSC---- 450
Query: 361 DNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFN 420
VP + A + +N+ D A + K++ +
Sbjct: 451 -----------SVPEAINNPRQEAYRMRMQNAHSVD--------NASPNTGQKRKAEGSD 491
Query: 421 SDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVC 480
S+ ED ++L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YYY+G
Sbjct: 492 SEPEPEDNIRLWEEGWKQRYYKNKFDVDASDEK--FRRKVVQSYVEGLCWVLRYYYQGCA 549
Query: 481 SWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLM 539
SW+WF+P+HYAPFASD +++ FE G PFKP QL+GVFP+AS + LPE +R+LM
Sbjct: 550 SWKWFFPFHYAPFASDFENISCLFKEFEKGTKPFKPLEQLMGVFPAASGNFLPESWRRLM 609
Query: 540 TDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 599
DP+S I DFYP DF +D+NGK+++WQG+A LPF+DE RL ++++ LT +E RRNS
Sbjct: 610 NDPDSSIIDFYPDDFAIDLNGKKFAWQGVALLPFVDERRLRAALEEVYPDLTPDETRRNS 669
Query: 600 IMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPH 659
+ D +FV SHPL+ I+ L + ++ PEL G+ G + DP
Sbjct: 670 LGGDSIFVGESHPLNDFIHEL--------YRANTTEATQIPPELCHGIQGKVQ-LEEDPI 720
Query: 660 PP--VFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKPAPVL 717
P + SPV + D+ N + ++ P+ G IF K +V KPAP L
Sbjct: 721 LPNKIIESPVPLLRDLSQNFAISIKFEDPEYED-------GYIF-KAVVLQGAKKPAPTL 772
Query: 718 ----W---HEDSGRRPHENGRHNPHGTISGRQLGEAAHRLVANSLQHMKVDRNG 764
W ++D RP N L +A R + ++L + R G
Sbjct: 773 KPGDWEKSNQDRSWRPQLGFNQNRKPV----HLDSSAFRTLGHTLPQTRGPRGG 822
>gi|440911591|gb|ELR61240.1| 5'-3' exoribonuclease 2, partial [Bos grunniens mutus]
Length = 926
Score = 545 bits (1405), Expect = e-152, Method: Compositional matrix adjust.
Identities = 321/739 (43%), Positives = 433/739 (58%), Gaps = 70/739 (9%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++ E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 86 MNQQRSRRFRASKEGMEAEIEKQRVREEILAKGGYLPPEEIKERFDSNCITPGTEFMDNL 145
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 146 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 205
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 206 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHDVKDCEGLPREKKGKHDE 264
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + F+ + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 265 LADSLPCAEGEFIFIRLSVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPH 324
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR-- 298
+P+LEIREGAI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 325 LPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKD 384
Query: 299 -----ARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQ 353
R + +R+KR++ G + P A P GS++AS P + Y+
Sbjct: 385 DEDSFRRRQKEKRKRMKRDQPSFSPGGILTPHALGSRSSP-----GSQVASNPRQAAYEM 439
Query: 354 SECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLR 413
R+ N S P+ SF +D + + ++
Sbjct: 440 -----RMQNNLSPSVSPN-------------------TSFTSDGSPSP-------RGGIK 468
Query: 414 DKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMH 473
K+D +S+ ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+
Sbjct: 469 RKADDSDSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLR 526
Query: 474 YYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALP 532
YYY+G SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP
Sbjct: 527 YYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLP 586
Query: 533 EHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTE 592
+RKLM+DP+S I DFYP DF +D+NGKRY+WQG+A LPF+DE RL ++++ LT
Sbjct: 587 PSWRKLMSDPDSSIIDFYPEDFAIDLNGKRYAWQGVALLPFVDERRLRAALEEVYPDLTP 646
Query: 593 EEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYIS 652
EE RRNS+ D+LFV HPL I L + E V+V PEL G+ G S
Sbjct: 647 EETRRNSLGGDVLFVGKHHPLHDFILEL----YKTGSTESVDVP----PELCHGIQGKFS 698
Query: 653 PCAGDPHP-PVFRSPVASMEDIMGNQVLCAIYKLPD-AHKHVTRPPAGVIFPKKIVQLED 710
P V SP+ ++D+ N V+ +K P A ++ + V+ P
Sbjct: 699 LDEEAVLPNQVVCSPIPVLKDLTHNAVISINFKDPQFAEDYIFK---AVMLPGA------ 749
Query: 711 LKPAPVL----WHEDSGRR 725
KPAPVL W + S R
Sbjct: 750 RKPAPVLKPSDWEKSSNGR 768
>gi|426240937|ref|XP_004014350.1| PREDICTED: 5'-3' exoribonuclease 2 [Ovis aries]
Length = 897
Score = 545 bits (1404), Expect = e-152, Method: Compositional matrix adjust.
Identities = 322/739 (43%), Positives = 433/739 (58%), Gaps = 70/739 (9%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 57 MNQQRSRRFRASKEGMEAAIEKQRVREEILAKGGYLPPEEIKERFDSNCITPGTEFMDNL 116
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 117 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 176
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 177 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHDVKDCEGLPREKKGKHDE 235
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 236 LADSLPCAEGEFIFLRLSILREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPH 295
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR-- 298
+P+LEIREGAI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 296 LPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKD 355
Query: 299 -----ARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQ 353
R + +R+KR++ G + P A P GS++AS P + Y+
Sbjct: 356 DEDSFRRRQKEKRKRMKRDQPSFSPGGILTPHALGSRSSP-----GSQVASNPRQAAYEM 410
Query: 354 SECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLR 413
R+ N S P+ SF +D + + +K +
Sbjct: 411 -----RMQNNLSPSVSPN-------------------TSFTSDGSPSP---RGGIKRKVE 443
Query: 414 DKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMH 473
D +S+ ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+
Sbjct: 444 DS----DSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLR 497
Query: 474 YYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALP 532
YYY+G SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP
Sbjct: 498 YYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLP 557
Query: 533 EHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTE 592
+RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT
Sbjct: 558 PSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTP 617
Query: 593 EEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYIS 652
EE RRNS+ D+LFV HPL I L + E V+V PEL G+ G S
Sbjct: 618 EETRRNSLGGDVLFVGKHHPLHDFILEL----YKTGSTESVDVP----PELCHGIQGKFS 669
Query: 653 PCAGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHVTRPPAGVIFPKKIVQLED 710
P V SP+ ++D+ N V+ +K P A ++ + V+ P
Sbjct: 670 LDEEAVLPDQVVCSPIPVLKDLTHNAVISINFKDPQFAEDYIFK---AVMLPGA------ 720
Query: 711 LKPAPVL----WHEDSGRR 725
KPAPVL W + S R
Sbjct: 721 RKPAPVLKPSDWEKSSNGR 739
>gi|300794747|ref|NP_001179401.1| 5'-3' exoribonuclease 2 [Bos taurus]
gi|296481414|tpg|DAA23529.1| TPA: 5'-3' exoribonuclease 2 [Bos taurus]
Length = 951
Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust.
Identities = 321/739 (43%), Positives = 433/739 (58%), Gaps = 70/739 (9%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++ E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 111 MNQQRSRRFRASKEGMEAEIEKQRVREEILAKGGYLPPEEIKERFDSNCITPGTEFMDNL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 171 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 231 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHDVKDCEGLPREKKGKHDE 289
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + F+ + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 290 LADSLPCAEGEFIFIRLSVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR-- 298
+P+LEIREGAI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 350 LPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKD 409
Query: 299 -----ARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQ 353
R + +R+KR++ G + P A P GS++AS P + Y+
Sbjct: 410 DEDSFRRRQKEKRKRMKRDQPSFSPGGILTPHALGSRSSP-----GSQVASNPRQAAYEM 464
Query: 354 SECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLR 413
R+ N S P+ SF +D + + ++
Sbjct: 465 -----RMQNNLSPSVSPN-------------------TSFTSDGSPSP-------RGGIK 493
Query: 414 DKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMH 473
K+D +S+ ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+
Sbjct: 494 RKADDSDSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLR 551
Query: 474 YYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALP 532
YYY+G SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP
Sbjct: 552 YYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLP 611
Query: 533 EHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTE 592
+RKLM+DP+S I DFYP DF +D+NGKRY+WQG+A LPF+DE RL ++++ LT
Sbjct: 612 PSWRKLMSDPDSSIIDFYPEDFAIDLNGKRYAWQGVALLPFVDERRLRAALEEVYPDLTP 671
Query: 593 EEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYIS 652
EE RRNS+ D+LFV HPL I L + E V+V PEL G+ G S
Sbjct: 672 EETRRNSLGGDVLFVGKHHPLHDFILEL----YKTGSTESVDVP----PELCHGIQGKFS 723
Query: 653 PCAGDPHP-PVFRSPVASMEDIMGNQVLCAIYKLPD-AHKHVTRPPAGVIFPKKIVQLED 710
P V SP+ ++D+ N V+ +K P A ++ + V+ P
Sbjct: 724 LDEEAVLPNQVVCSPIPVLKDLTHNAVISINFKDPQFAEDYIFK---AVMLPGA------ 774
Query: 711 LKPAPVL----WHEDSGRR 725
KPAPVL W + S R
Sbjct: 775 RKPAPVLKPSDWEKSSNGR 793
>gi|417413149|gb|JAA52920.1| Putative 5'-3' exonuclease xrn1/kem1/sep1 involved in dna strand
exchange and mrna turnover, partial [Desmodus rotundus]
Length = 926
Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust.
Identities = 323/739 (43%), Positives = 433/739 (58%), Gaps = 70/739 (9%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 87 MNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNL 146
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 147 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 206
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 207 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKMGKHDE 265
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 266 LADSLPCTEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPH 325
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR-- 298
+P+LEIREGAI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 326 LPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKD 385
Query: 299 -----ARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQ 353
R + +R+KR++ G + P A P+ S++AS P + Y+
Sbjct: 386 DEDSFRRRQKEKRKRMKRDQPAFTPGGILTPHALGSRSSPI-----SQVASNPRQAAYEM 440
Query: 354 SECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLR 413
R+ N S P+ SF +D + L + R
Sbjct: 441 -----RMQNNSSPSVSPN-------------------TSFTSDGS------PSPLGGIKR 470
Query: 414 DKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMH 473
K+D +S+ ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+
Sbjct: 471 -KADDSDSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLR 527
Query: 474 YYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALP 532
YYY+G SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP
Sbjct: 528 YYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLP 587
Query: 533 EHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTE 592
+RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT
Sbjct: 588 PSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTP 647
Query: 593 EEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYIS 652
EE +RNS+ +D+LFV HPL I L Q E V+ L PEL G+ G S
Sbjct: 648 EETKRNSLGSDVLFVGKYHPLYDFIVEL----YQTGSTEPVD----LPPELCHGIQGKFS 699
Query: 653 PCAGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHVTRPPAGVIFPKKIVQLED 710
P + SPV + D+ N + +K P A ++ + VI P
Sbjct: 700 LDEEAILPDQIVSSPVPVLRDLTQNTAISINFKDPHFAEDYIFK---AVILPGA------ 750
Query: 711 LKPAPVL----WHEDSGRR 725
KPAPVL W + S R
Sbjct: 751 RKPAPVLKPSDWEKSSNGR 769
>gi|224047545|ref|XP_002199834.1| PREDICTED: 5'-3' exoribonuclease 2 [Taeniopygia guttata]
Length = 949
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 330/805 (40%), Positives = 451/805 (56%), Gaps = 75/805 (9%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++++RQE +G LPP+ + FDSN ITPGTEFM L
Sbjct: 111 MNQQRSRRFRASKEGMEAAEEKQKIRQEILAKGGYLPPEEVKERFDSNCITPGTEFMDNL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLN++PGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 171 AKCLRYYIADRLNSNPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE++F+I+RE F P + C LC Q GH +C+G + K G+ D+
Sbjct: 231 GADADLIMLGLATHELNFTIIRE-EFKPNKPKPCALCNQMGHEVKDCQGLPREKQGKHDQ 289
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + V ++ + F+ + LREYL+ E + + PF D E VDD++FMCFFVGNDFLPH
Sbjct: 290 FADTLPVSEQEFIFIRLCVLREYLERELTMASLPFTFDFERSVDDWVFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIREGAI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 350 LPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGFVNLQRVQMIMLAVGEVEDSIFKKRKD 409
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPY---QQSECV 357
R K ++ + +R QP S +P +F L + SP +Q+
Sbjct: 410 DDDNFKRRQKEKRKRLKRD-------QP-SFIPGGQFSPQALGNRSSPQAICNPRQAAFE 461
Query: 358 GRLDN--GKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDK 415
R+ + TS P+ ++G I +++P+
Sbjct: 462 MRMHDRQNSTTSASPNTSLTPDGSPSLGGGIKRKPEDSDSEPE----------------- 504
Query: 416 SDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYY 475
ED ++L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YY
Sbjct: 505 ---------PEDNIRLWETGWKQRYYKNKFDVDASDEK--FRRKVVQSYVEGLCWVLRYY 553
Query: 476 YEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEH 534
Y+G SW W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP
Sbjct: 554 YQGCASWNWYYPFHYAPFASDFEGIADMPSDFEKGSKPFKPLEQLMGVFPAASGNFLPPT 613
Query: 535 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 594
+RKLMTDP S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE
Sbjct: 614 WRKLMTDPESSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEE 673
Query: 595 ARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPC 654
+RRNS+ +D+LFV HPL I +Q K K V + PEL G+ G ++
Sbjct: 674 SRRNSLGSDVLFVGKHHPLCDFI------VEQYKTKNTEAVD--IPPELCHGIQGKLTLN 725
Query: 655 AGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKP 713
P V +SPV + D+ N + +K P + +F K V KP
Sbjct: 726 NNAVLPDQVVQSPVPMLRDLTQNSAVSISFKDPQFAED-------FVF-KATVLPGAKKP 777
Query: 714 APVLWHEDSGRRPHENGRHNPHGTISGRQLGEAAHR-------LVANSLQH-MKVDRNGY 765
APVL +P + + N G QLG R V +L H M DR
Sbjct: 778 APVL-------KPGDWEKTNNDGRPWRPQLGFNRDRKPVHLDQSVFRTLGHTMPRDRGMP 830
Query: 766 GDRMHGSPLPYAAAPYVPPVPSYQE 790
G + PL +PY P+ Q+
Sbjct: 831 GMYPNAVPLGAYGSPYARPLMGSQQ 855
>gi|301069399|ref|NP_001001944.2| 5'-3' exoribonuclease 2 [Danio rerio]
Length = 952
Score = 543 bits (1400), Expect = e-151, Method: Compositional matrix adjust.
Identities = 313/730 (42%), Positives = 415/730 (56%), Gaps = 43/730 (5%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ + A E++++R+E G LPP+ + FDSN ITPGTEFM L
Sbjct: 111 MNQQRSRRFRASKEGVELAEEKQKMREEVIERGGYLPPEEIKERFDSNCITPGTEFMDNL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YY+ RL NDPGW I V LSDA+VPGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 171 AKCLRYYVADRLTNDPGWRNITVFLSDASVPGEGEHKIMDYIRRQRGQPNHDPNTHHCLC 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +C+G + K GE DE
Sbjct: 231 GADADLIMLGLATHEPNFTIIRE-EFKPNKPRPCALCSQMGHEIKDCQGLPREKQGEHDE 289
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + V ++ + F+ + LREYL+ E + + PF E VDD++FMCFFVGNDFLPH
Sbjct: 290 FADTIPVSEQEFIFIRLAVLREYLERELTMASLPFPFSFERSVDDWVFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIREGAI+ L+ +YK GGYLT+ +L RVE +QAVG ED IF+KR
Sbjct: 350 LPSLEIREGAIDRLVGIYKDVVHKTGGYLTENGFVNLERVELIMQAVGVAEDNIFKKR-- 407
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRL 360
+ E KR ++ E Q S +P +F L P Q +
Sbjct: 408 --KEDDESFKRRMKDKKKRMKAE---QRPSFLPGGQFAPHALGGRDRPMAVQNARHAAFE 462
Query: 361 DNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFN 420
+G L + G E+ S + ++ K+D +
Sbjct: 463 MRMQGNQRNQDAAQSLRAMMRNGKGSAESSGSMDN--------------RGVKRKADDSD 508
Query: 421 SDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVC 480
S+ ED V+L E GWK+RYY+ KF+ + +E RK VV Y EGLCWV+ YYY+G
Sbjct: 509 SEPEPEDNVRLWEDGWKQRYYKTKFDVDATD--DEFRKKVVQSYVEGLCWVLRYYYQGCA 566
Query: 481 SWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLM 539
SW+W++P+HYAPFASD KD+ FE G PFKP QL+GVFP+AS + LP +R LM
Sbjct: 567 SWKWYFPFHYAPFASDFKDIKGMFSDFEKGTKPFKPLEQLMGVFPAASGNFLPTTWRALM 626
Query: 540 TDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 599
+DP S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL + ++ + LT EE RRNS
Sbjct: 627 SDPESSIIDFYPDDFAIDLNGKKYAWQGVALLPFVDERRLRAALAEVYNDLTPEEVRRNS 686
Query: 600 IMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPH 659
+ +D++FV SH L I L + + E G+ G ++ DP
Sbjct: 687 LGSDVMFVGRSHALCDFIQEL--------YRAESHTATEIPAEFCHGIQGILN-LDEDPI 737
Query: 660 PP--VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHVTRPPAGVIFPKKIVQLEDLKPAPV 716
P + SP+ + DI N + +K P A V + VI P + + LKP
Sbjct: 738 LPDKLVESPIPVLRDISSNCAIGIKFKDPQYADGFVFK---AVILPGAKIPNKVLKPGD- 793
Query: 717 LWHEDSGRRP 726
W E S R P
Sbjct: 794 -W-EQSNRGP 801
>gi|149408751|ref|XP_001505862.1| PREDICTED: 5'-3' exoribonuclease 2 [Ornithorhynchus anatinus]
Length = 950
Score = 543 bits (1399), Expect = e-151, Method: Compositional matrix adjust.
Identities = 314/736 (42%), Positives = 428/736 (58%), Gaps = 64/736 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ A++ E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 111 MNQQRSRRFRASKEGAEATVEKQRVREEILAKGGYLPPEEVKERFDSNCITPGTEFMDNL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNN+PGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 171 AKCLRYYIADRLNNEPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +C+G A+ K GEFDE
Sbjct: 231 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQLGHEVKDCQGLAREKQGEFDE 289
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + +L + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 290 LADSLPCSEGEFIYLRLNVLREYLEKELTMASLPFPFDIERSIDDWVFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIREGAI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 350 LPSLEIREGAIDRLVNIYKSVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKD 409
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVP-----VSRFHGSRLASGPSPSPYQQSE 355
+ R K ++ + +R P P ++ GS++AS P + Y+
Sbjct: 410 DEENFKRRQKEKRKRMKRD---HPAFTPGGILTPQPLGAKNSSGSQVASNPRQAAYEM-- 464
Query: 356 CVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDK 415
R+ N S P+ SF +D + +K + D
Sbjct: 465 ---RMQNNSSPSASPN-------------------TSFTSDGSPSP---AGGIKRKVEDS 499
Query: 416 SDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYY 475
+S+ ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YY
Sbjct: 500 ----DSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYY 553
Query: 476 YEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEH 534
Y+G SW+W+YP+HYAPFASD + + FE G PF+P QL+GVFP+AS + LP
Sbjct: 554 YQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFRPLEQLMGVFPAASGNFLPPS 613
Query: 535 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 594
+RKLM+DP S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT +E
Sbjct: 614 WRKLMSDPESSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPDE 673
Query: 595 ARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPC 654
RRNS+ D+LFV HPL + L + E V++ PEL G+ G ++
Sbjct: 674 NRRNSLGGDVLFVGKHHPLCDFLSEL----YKTSSAEPVDIP----PELCHGIQGQLTLD 725
Query: 655 AGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKP 713
P SPV + D+ N + +K P + IF K +V KP
Sbjct: 726 EEAVLPDQTVCSPVPVLRDLTQNTAISINFKDPQFGED-------YIF-KAVVLPGARKP 777
Query: 714 APVL----WHEDSGRR 725
APVL W + S R
Sbjct: 778 APVLKPGDWEKSSNGR 793
>gi|194382024|dbj|BAG64381.1| unnamed protein product [Homo sapiens]
Length = 874
Score = 543 bits (1398), Expect = e-151, Method: Compositional matrix adjust.
Identities = 315/718 (43%), Positives = 420/718 (58%), Gaps = 61/718 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 35 MNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNL 94
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 95 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 154
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 155 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDE 213
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 214 LADSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPH 273
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIRE AI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 274 LPSLEIRENAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKD 333
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRF-----HGSRLASGPSPSPYQQSE 355
R K ++ + +R +P P ++ GS++AS P + Y+
Sbjct: 334 DEDSFRRRQKEKRKRMKRD---QPAFTPSGILTPHALGSRNSSGSQVASNPRQAAYEM-- 388
Query: 356 CVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDK 415
R+ N S P+ SF +D + L + R
Sbjct: 389 ---RMQNNSSPSISPN-------------------TSFTSDGS------PSPLGGIKRKA 420
Query: 416 SDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYY 475
D+ + P ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YY
Sbjct: 421 EDSDSEPEP-EDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYY 477
Query: 476 YEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEH 534
Y+G SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP
Sbjct: 478 YQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPS 537
Query: 535 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 594
+RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE
Sbjct: 538 WRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEE 597
Query: 595 ARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPC 654
RRNS+ D+LFV HPL I L Q E VEV PEL G+ G S
Sbjct: 598 TRRNSLGGDVLFVGKHHPLHDFILEL----YQTGSTEPVEVP----PELCHGIQGKFSLD 649
Query: 655 AGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHV--------TRPPAGVIFP 702
P + SPV + D+ N V+ +K P A ++ R PA V+ P
Sbjct: 650 EEAILPDQIVCSPVPMLRDLTQNTVVSINFKDPQFAEDYIFKAVMLPGARKPAAVLKP 707
>gi|38569540|gb|AAR24369.1| 5'-3' exoribonuclease 2 isoform 3 [Homo sapiens]
Length = 907
Score = 543 bits (1398), Expect = e-151, Method: Compositional matrix adjust.
Identities = 315/718 (43%), Positives = 420/718 (58%), Gaps = 61/718 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 68 MNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNL 127
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 128 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 187
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 188 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDE 246
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 247 LADSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPH 306
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIRE AI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 307 LPSLEIRENAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKD 366
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSE 355
R K ++ + +R +P P ++ GS++AS P + Y+
Sbjct: 367 DEDSFRRRQKEKRKRMKRD---QPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYEM-- 421
Query: 356 CVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDK 415
R+ N S P+ SF +D + L + R
Sbjct: 422 ---RMQNNSSPSISPN-------------------TSFTSDGS------PSPLGGIKRKA 453
Query: 416 SDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYY 475
D+ + P ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YY
Sbjct: 454 EDSDSEPEP-EDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYY 510
Query: 476 YEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEH 534
Y+G SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP
Sbjct: 511 YQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPS 570
Query: 535 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 594
+RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE
Sbjct: 571 WRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEE 630
Query: 595 ARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPC 654
RRNS+ D+LFV HPL I L Q E VEV PEL G+ G S
Sbjct: 631 TRRNSLGGDVLFVGKHHPLHDFILEL----YQTGSTEPVEVP----PELCHGIQGKFSLD 682
Query: 655 AGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHV--------TRPPAGVIFP 702
P + SPV + D+ N V+ +K P A ++ R PA V+ P
Sbjct: 683 EEAILPDQIVCSPVPMLRDLTQNTVVSINFKDPQLAEDYIFKAVMLPGARKPAAVLKP 740
>gi|449269264|gb|EMC80058.1| 5'-3' exoribonuclease 2, partial [Columba livia]
Length = 914
Score = 543 bits (1398), Expect = e-151, Method: Compositional matrix adjust.
Identities = 327/799 (40%), Positives = 454/799 (56%), Gaps = 63/799 (7%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++++RQE +G LPP+ + FDSN ITPGTEFM L
Sbjct: 87 MNQQRSRRFRASKEGMEAAEEKQKIRQEILSKGGILPPEEVKERFDSNCITPGTEFMDNL 146
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLN+DPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 147 AKCLRYYIADRLNSDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 206
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +C+G + K G+ D+
Sbjct: 207 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCALCNQMGHEVKDCQGLPREKQGKHDQ 265
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + V ++ + F+ + LREYL+ E + + PF D E VDD++FMCFFVGNDFLPH
Sbjct: 266 FADSLPVAEQEFIFIRLCVLREYLERELTMASLPFTFDFERSVDDWVFMCFFVGNDFLPH 325
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIREGAI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 326 LPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGFVNLQRVQMIMLAVGEVEDSIFKKRKD 385
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSP---SPYQQSECV 357
R K ++ + +R QP + +P +F L + SP S +Q+
Sbjct: 386 DDDNFKRRQKEKRKRMKRD-------QP-AFIPGGQFSPQALGNRSSPQAISNPRQAAFE 437
Query: 358 GRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSD 417
R+ + R + P S ++ + E L ++ K++
Sbjct: 438 MRMHD------RQNATPSSSPNTSLTS------------------EGSPSLAGGIKRKAE 473
Query: 418 AFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYE 477
+S+ ED ++L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YYY+
Sbjct: 474 DSDSEPEPEDNIRLWETGWKQRYYKNKFDVDASDEK--FRRKVVQSYVEGLCWVLRYYYQ 531
Query: 478 GVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYR 536
G SW W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP +R
Sbjct: 532 GCASWNWYYPFHYAPFASDFEGIADMPSDFEKGSKPFKPLEQLMGVFPAASGNFLPPTWR 591
Query: 537 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 596
KLMTDP S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE+R
Sbjct: 592 KLMTDPESSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEESR 651
Query: 597 RNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAG 656
RNS+ D+LFV HPL I +Q K K V + PEL G+ G ++
Sbjct: 652 RNSLGGDVLFVGKHHPLCDFI------VEQYKTKNTEPVD--IPPELCHGIQGKLTLNDN 703
Query: 657 DPHPP-VFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKPAP 715
P SPV + D+ N + +K P + IF ++ KPAP
Sbjct: 704 AVLPEQTVESPVPMLRDLTQNSAISISFKDPQFDEE-------FIFKANVLPGAK-KPAP 755
Query: 716 VLWHEDSGRRPHENGRHNPH-GTISGRQ---LGEAAHRLVANSLQHMKVDRNGYGDRMHG 771
VL D + ++ P G R+ L +AA R + ++ M +R G +
Sbjct: 756 VLKPGDWEKTNNDGRPWRPQLGFNRDRKPVHLDQAAFRTLGHT---MPRERGMPGMYANA 812
Query: 772 SPLPYAAAPYVPPVPSYQE 790
PL +PY P+ Q+
Sbjct: 813 VPLGTYGSPYARPLMGAQQ 831
>gi|344279981|ref|XP_003411764.1| PREDICTED: 5'-3' exoribonuclease 2 [Loxodonta africana]
Length = 950
Score = 542 bits (1397), Expect = e-151, Method: Compositional matrix adjust.
Identities = 322/735 (43%), Positives = 431/735 (58%), Gaps = 62/735 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 111 MNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 171 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 231 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKRGKHDE 289
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 290 LADSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDIERSIDDWVFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIREGAI+ L+ +YKK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 350 LPSLEIREGAIDRLVNIYKKVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKD 409
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPS-PSPYQQSECVGR 359
R K ++ + +R +P P ++ + GSR + G + +Q+ R
Sbjct: 410 DEDSFRRRQKEKRKRMKRD---QPAFTPGGIL-TPQALGSRNSPGSQVANNARQAAYEMR 465
Query: 360 LDNGKGTSGRPH-KVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDA 418
+ N S P+ S + IG +AE+S
Sbjct: 466 MHNNSSPSVSPNTSFTSDGSPSPIGGIKRKAEDS-------------------------- 499
Query: 419 FNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEG 478
+S+ ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YYY+G
Sbjct: 500 -DSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYYYQG 556
Query: 479 VCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRK 537
SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP +RK
Sbjct: 557 CASWKWYYPFHYAPFASDFEGIASMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRK 616
Query: 538 LMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARR 597
LM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE +R
Sbjct: 617 LMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETKR 676
Query: 598 NSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGD 657
NS+ D+LFV HPL I L Q E VEV PEL G+ G S G+
Sbjct: 677 NSLGGDVLFVGKHHPLHDFILEL----YQTGSTEPVEVP----PELCHGIRGKFS-LDGE 727
Query: 658 PHPP--VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHVTRPPAGVIFPKKIVQLEDLKPA 714
P + SPV + D+ N + +K P A +V + V+ P KPA
Sbjct: 728 AVLPDQIVCSPVPLLRDLSHNTAISINFKDPQFAEDYVFK---AVMLPGA------RKPA 778
Query: 715 PVL----WHEDSGRR 725
PVL W + S R
Sbjct: 779 PVLKPGDWEKSSNGR 793
>gi|335304534|ref|XP_003134355.2| PREDICTED: 5'-3' exoribonuclease 2 [Sus scrofa]
Length = 950
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 321/739 (43%), Positives = 432/739 (58%), Gaps = 70/739 (9%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 111 MNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 171 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 231 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDE 289
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 290 LADSLPSAEGEFIFLRLSVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR-- 298
+P+LEIREGAI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 350 LPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKD 409
Query: 299 -----ARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQ 353
R + +R+KR++ G + P A P GS++AS P + Y+
Sbjct: 410 DEDSFRRRQKEKRKRMKRDQPSFSPGGILTPHALGSRNSP-----GSQVASNPRQAAYEM 464
Query: 354 SECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLR 413
R+ N S P+ SF +D + + ++
Sbjct: 465 -----RMQNNSSPSVSPN-------------------TSFISDGSPSP-------RGGIK 493
Query: 414 DKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMH 473
K++ +S+ ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+
Sbjct: 494 RKAEDSDSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLR 551
Query: 474 YYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALP 532
YYY+G SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP
Sbjct: 552 YYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLP 611
Query: 533 EHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTE 592
+RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT
Sbjct: 612 PSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTP 671
Query: 593 EEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYIS 652
EE RRNS+ D+LFV HPL + L + E V+V PEL G+ G S
Sbjct: 672 EETRRNSLGGDVLFVGKHHPLHDFVLEL----YKTGSTESVDVP----PELCHGIQGKFS 723
Query: 653 PCAGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHVTRPPAGVIFPKKIVQLED 710
P V SPV + D+ N + +K P A +V + V+ P
Sbjct: 724 LDEEAILPDQVVCSPVPMLRDLTQNGTISINFKDPQFAEDYVFK---AVMLPGA------ 774
Query: 711 LKPAPVL----WHEDSGRR 725
KPAPVL W + S R
Sbjct: 775 RKPAPVLKPGDWEKSSNGR 793
>gi|332858060|ref|XP_001145469.2| PREDICTED: 5'-3' exoribonuclease 2 isoform 5 [Pan troglodytes]
gi|397478697|ref|XP_003810676.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 3 [Pan paniscus]
Length = 1028
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 314/718 (43%), Positives = 420/718 (58%), Gaps = 61/718 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 189 MNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNL 248
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 249 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 308
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 309 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDE 367
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 368 LADSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPH 427
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIRE AI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 428 LPSLEIRENAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKD 487
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSE 355
R K ++ + +R +P P ++ GS++AS P + Y+
Sbjct: 488 DEDSFRRRQKEKRKRMKRD---QPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYEM-- 542
Query: 356 CVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDK 415
R+ N S P+ SF +D + L + R
Sbjct: 543 ---RMQNNSSPSISPN-------------------TSFTSDGS------PSPLGGIKRKA 574
Query: 416 SDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYY 475
D+ + P ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YY
Sbjct: 575 EDSDSEPEP-EDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYY 631
Query: 476 YEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEH 534
Y+G SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP
Sbjct: 632 YQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPS 691
Query: 535 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 594
+RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE
Sbjct: 692 WRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEE 751
Query: 595 ARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPC 654
RRNS+ D+LFV HPL I L Q E V+V PEL G+ G S
Sbjct: 752 TRRNSLGGDVLFVGKHHPLHDFILEL----YQTGSTEPVDVP----PELCHGIQGKFSLD 803
Query: 655 AGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHV--------TRPPAGVIFP 702
P + SPV + D+ N V+ +K P A ++ R PA V+ P
Sbjct: 804 EEAILPDQIVCSPVPMLRDLTQNTVVSINFKDPQFAEDYIFKAVMLPGARKPAAVLKP 861
>gi|194380934|dbj|BAG64035.1| unnamed protein product [Homo sapiens]
Length = 896
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 315/718 (43%), Positives = 420/718 (58%), Gaps = 61/718 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 57 MNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNL 116
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 117 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 176
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 177 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDE 235
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 236 LADSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPH 295
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIRE AI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 296 LPSLEIRENAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKD 355
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSE 355
R K ++ + +R +P P ++ GS++AS P + Y+
Sbjct: 356 DEDSFRRRQKEKRKRMKRD---QPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYEM-- 410
Query: 356 CVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDK 415
R+ N S P+ SF +D + L + R
Sbjct: 411 ---RMQNNSSPSISPN-------------------TSFTSDGS------PSPLGGIKRKA 442
Query: 416 SDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYY 475
D+ + P ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YY
Sbjct: 443 EDSDSEPEP-EDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYY 499
Query: 476 YEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEH 534
Y+G SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP
Sbjct: 500 YQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPS 559
Query: 535 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 594
+RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE
Sbjct: 560 WRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEE 619
Query: 595 ARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPC 654
RRNS+ D+LFV HPL I L Q E VEV PEL G+ G S
Sbjct: 620 TRRNSLGGDVLFVGKHHPLHDFILEL----YQTGSTEPVEVP----PELCHGIQGKFSLD 671
Query: 655 AGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHV--------TRPPAGVIFP 702
P + SPV + D+ N V+ +K P A ++ R PA V+ P
Sbjct: 672 EEAILPDQIVCSPVPMLRDLTQNTVVSINFKDPQFAEDYIFKAVMLPGARKPAAVLKP 729
>gi|193786052|dbj|BAG50941.1| unnamed protein product [Homo sapiens]
Length = 950
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 315/718 (43%), Positives = 420/718 (58%), Gaps = 61/718 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 111 MNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 171 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 231 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDE 289
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 290 LADSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIRE AI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 350 LPSLEIRENAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKD 409
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSE 355
R K ++ + +R +P P ++ GS++AS P + Y+
Sbjct: 410 DEDSFRRRQKEKRKRMKRD---QPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYEM-- 464
Query: 356 CVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDK 415
R+ N S P+ SF +D + L + R
Sbjct: 465 ---RMQNNSSPSISPN-------------------TSFTSDGS------PSPLGGIKRKA 496
Query: 416 SDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYY 475
D+ + P ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YY
Sbjct: 497 EDSDSEPEP-EDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYY 553
Query: 476 YEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEH 534
Y+G SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP
Sbjct: 554 YQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPS 613
Query: 535 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 594
+RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE
Sbjct: 614 WRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEE 673
Query: 595 ARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPC 654
RRNS+ D+LFV HPL I L Q E VEV PEL G+ G S
Sbjct: 674 TRRNSLGGDVLFVGKHHPLHDFILEL----YQTGSTEPVEVP----PELCHGIQGKFSLD 725
Query: 655 AGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHV--------TRPPAGVIFP 702
P + SPV + D+ N V+ +K P A ++ R PA V+ P
Sbjct: 726 EEAILPDQIVCSPVPMLRDLTQNTVVSINFKDPQFAEDYIFKAVMLPGARKPAAVLKP 783
>gi|395851967|ref|XP_003798518.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 2 [Otolemur garnettii]
Length = 908
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 316/735 (42%), Positives = 427/735 (58%), Gaps = 61/735 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 68 MNQQRSRRFRASKEGMEAALEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNL 127
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGWE + VILSDA+VPGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 128 AKCLRYYIADRLNNDPGWENLTVILSDASVPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 187
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 188 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDE 246
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 247 LADSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPH 306
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIREGAI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 307 LPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKD 366
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSE 355
R K ++ + +R +P P ++ GS++AS P + Y+
Sbjct: 367 DEDSFRRRQKEKRKRMKRD---QPAFTPSGILTPHALSSRNSPGSQVASNPRHAAYEM-- 421
Query: 356 CVGRLDNGKGTSGRPHKVPRLSSG--ATIGAAIVEAENSFETDPQENKEEFKAKLKELLR 413
R+ N + S G + +G +AE+S
Sbjct: 422 ---RMQNNNCSPSISPNTSFTSDGSPSPVGGIKRKAEDS--------------------- 457
Query: 414 DKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMH 473
+S+ ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+
Sbjct: 458 ------DSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLR 509
Query: 474 YYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALP 532
YYY+G SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP
Sbjct: 510 YYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLP 569
Query: 533 EHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTE 592
+RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT
Sbjct: 570 PSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTP 629
Query: 593 EEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYIS 652
EE +RNS+ +D+LFV HPL I L Q E V+V PEL G+ G S
Sbjct: 630 EETKRNSLGSDVLFVGKRHPLHDFIVEL----YQTGSTEPVDVP----PELCHGIQGKFS 681
Query: 653 PCAGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHVTRPPAGVIFPKKIVQLED 710
P + SPV + D+ N + +K P A ++ + V+ P
Sbjct: 682 LDEEAILPDQIVCSPVPMLRDLTQNTAVSINFKDPQFAEDYIFK---AVMLPGARKPATV 738
Query: 711 LKPAPVLWHEDSGRR 725
LKP+ W + S R
Sbjct: 739 LKPSD--WEKSSNGR 751
>gi|402883353|ref|XP_003905184.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 2 [Papio anubis]
Length = 971
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 314/719 (43%), Positives = 420/719 (58%), Gaps = 63/719 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 132 MNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNL 191
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 192 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 251
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 252 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDE 310
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 311 LADSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPH 370
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIRE AI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 371 LPSLEIRENAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKD 430
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSE 355
R K ++ + +R +P P ++ GS++AS P + Y+
Sbjct: 431 DEDSFRRRQKEKRKRMKRD---QPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYEM-- 485
Query: 356 CVGRLDNGKGTSGRPH-KVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRD 414
R+ N S P+ S + IG +AE+S
Sbjct: 486 ---RMQNNSSPSISPNTSFTSDGSPSPIGGIKRKAEDS---------------------- 520
Query: 415 KSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 474
+S+ ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ Y
Sbjct: 521 -----DSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRY 573
Query: 475 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPE 533
YY+G SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP
Sbjct: 574 YYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPP 633
Query: 534 HYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEE 593
+RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT E
Sbjct: 634 SWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPE 693
Query: 594 EARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISP 653
E RRNS+ D+LFV HPL I L Q E V+V PEL G+ G S
Sbjct: 694 ETRRNSLGGDVLFVGKHHPLHDFILEL----YQTGSTEPVDVP----PELCHGIQGKFSL 745
Query: 654 CAGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHV--------TRPPAGVIFP 702
P + SPV + D+ N V+ +K P A ++ R PA V+ P
Sbjct: 746 DEEAILPDQIVCSPVPMLRDLTQNTVVSINFKDPQFAEDYIFKAVMLPGARKPAAVLKP 804
>gi|291388948|ref|XP_002710988.1| PREDICTED: 5'-3' exoribonuclease 2 [Oryctolagus cuniculus]
Length = 950
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 318/734 (43%), Positives = 426/734 (58%), Gaps = 60/734 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 111 MNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 171 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 231 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDE 289
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 290 LADSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIREGAI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 350 LPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKD 409
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSE 355
R K ++ + +R +P P ++ GS++AS P + Y+
Sbjct: 410 DEDSFRRRQKEKRKRMKRD---QPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYEM-- 464
Query: 356 CVGRLDNGKGTSGRPH-KVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRD 414
R+ N S P+ S + IG +AE+S
Sbjct: 465 ---RMQNNSSPSISPNTSFTSDGSPSPIGGIKRKAEDS---------------------- 499
Query: 415 KSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 474
+S+ ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ Y
Sbjct: 500 -----DSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRY 552
Query: 475 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPE 533
YY+G SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP
Sbjct: 553 YYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPP 612
Query: 534 HYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEE 593
+RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT E
Sbjct: 613 SWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPE 672
Query: 594 EARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISP 653
E RRNS+ D+LFV HPL I L Q E V+V PEL G+ G S
Sbjct: 673 ENRRNSLGGDVLFVGKHHPLHDFILEL----YQTGSAEPVDVP----PELCHGIQGKFSL 724
Query: 654 CAGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHVTRPPAGVIFPKKIVQLEDL 711
P V SPV + D+ N + +K P A ++ + V+ P L
Sbjct: 725 DEEAILPDQVVCSPVPMLRDLTQNTAISINFKDPQFAEDYIFK---AVLLPGARKPAAVL 781
Query: 712 KPAPVLWHEDSGRR 725
KP+ W + S R
Sbjct: 782 KPSD--WEKSSNGR 793
>gi|18860916|ref|NP_036387.2| 5'-3' exoribonuclease 2 [Homo sapiens]
gi|30173484|sp|Q9H0D6.1|XRN2_HUMAN RecName: Full=5'-3' exoribonuclease 2; AltName: Full=DHM1-like
protein; Short=DHP protein
gi|12053189|emb|CAB66775.1| hypothetical protein [Homo sapiens]
gi|119630591|gb|EAX10186.1| 5'-3' exoribonuclease 2, isoform CRA_a [Homo sapiens]
gi|182888117|gb|AAI60100.1| 5'-3' exoribonuclease 2 [synthetic construct]
Length = 950
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 315/718 (43%), Positives = 420/718 (58%), Gaps = 61/718 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 111 MNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 171 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 231 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDE 289
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 290 LADSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIRE AI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 350 LPSLEIRENAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKD 409
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSE 355
R K ++ + +R +P P ++ GS++AS P + Y+
Sbjct: 410 DEDSFRRRQKEKRKRMKRD---QPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYEM-- 464
Query: 356 CVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDK 415
R+ N S P+ SF +D + L + R
Sbjct: 465 ---RMQNNSSPSISPN-------------------TSFTSDGS------PSPLGGIKRKA 496
Query: 416 SDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYY 475
D+ + P ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YY
Sbjct: 497 EDSDSEPEP-EDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYY 553
Query: 476 YEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEH 534
Y+G SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP
Sbjct: 554 YQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPS 613
Query: 535 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 594
+RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE
Sbjct: 614 WRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEE 673
Query: 595 ARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPC 654
RRNS+ D+LFV HPL I L Q E VEV PEL G+ G S
Sbjct: 674 TRRNSLGGDVLFVGKHHPLHDFILEL----YQTGSTEPVEVP----PELCHGIQGKFSLD 725
Query: 655 AGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHV--------TRPPAGVIFP 702
P + SPV + D+ N V+ +K P A ++ R PA V+ P
Sbjct: 726 EEAILPDQIVCSPVPMLRDLTQNTVVSINFKDPQFAEDYIFKAVMLPGARKPAAVLKP 783
>gi|392884414|gb|AFM91039.1| 5'-3' exoribonuclease 2 [Callorhinchus milii]
Length = 952
Score = 541 bits (1395), Expect = e-151, Method: Compositional matrix adjust.
Identities = 300/695 (43%), Positives = 411/695 (59%), Gaps = 55/695 (7%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFRASK+ + AE+ R+R+E +G L + + FD N ITPGTEFM L
Sbjct: 111 MNQQRPRRFRASKEGVELLAEKTRMREEVISKGGFLSEEVIKERFDGNCITPGTEFMDNL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ +L+YY+ RLNNDPGW+ + VILSDA+VPGEGEHKIM ++R QR P +DPNT HCL
Sbjct: 171 ARSLRYYVADRLNNDPGWKNLTVILSDASVPGEGEHKIMDFIRRQRAQPNHDPNTHHCLC 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P Q C LCGQ GH C+G K K G+FD+
Sbjct: 231 GADADLIMLGLATHEPNFTIIREE-FKPNQPRPCALCGQIGHEIKECQGLPKDKQGQFDQ 289
Query: 181 -KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
G+ V ++ + F+ + LREYL+ E + + PF D E VDD++FMCFFVGNDFLP
Sbjct: 290 FAGNSAGVEEQEFIFIRLTVLREYLERELTMASLPFTFDFERSVDDWVFMCFFVGNDFLP 349
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR- 298
H+P+LEIREGAI+ L+ +YK GGYLT+ +L RV+ + AVG ED IF+KR
Sbjct: 350 HLPSLEIREGAIDRLVGIYKNVVHKTGGYLTENGFVNLERVQLIMIAVGEAEDNIFKKRR 409
Query: 299 ---ARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSE 355
QR E+ KR K S +P ++ SP QS
Sbjct: 410 EDDVLFRQRQKEKNKRLKGNR------------PSFIPGGQY---------SPQALGQS- 447
Query: 356 CVGRLDNGKGTSGRPHKV--PRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLR 413
GRP + PR + + + +N + N + L +
Sbjct: 448 ---------SGGGRPQAIQNPR-QTAFEMRVKDRDPQNRASSQNSANSDGSPVPLGT--K 495
Query: 414 DKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMH 473
K++ + + D ++L E GWK+RYY+ KF+ + + R+ VV Y EGLCWV+
Sbjct: 496 RKNEDSDEEQEPSDNIRLWEEGWKQRYYKNKFDVDATDAK--FRRKVVEAYVEGLCWVLQ 553
Query: 474 YYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALP 532
YYY+G SW+WF+P+HYAPFASD D+ + +FE G PFKP QL+GVFP+AS + LP
Sbjct: 554 YYYQGCASWKWFFPFHYAPFASDFTDIKELPTTFEKGTKPFKPLEQLMGVFPAASGNFLP 613
Query: 533 EHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTE 592
E +R LM+ PNS I DFYP DF +D+NGK+++WQG+A LPF+DE RL ++K+ LT
Sbjct: 614 ETWRYLMSYPNSSIIDFYPDDFALDLNGKKFAWQGVALLPFVDERRLRGALEKVYPDLTS 673
Query: 593 EEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYIS 652
+E RRNS+ +D+LFV SH L I + ++ Q + +L PEL G+ G ++
Sbjct: 674 DETRRNSLGSDILFVANSHKLFDFIVEMQKNDSQ---------ELQLPPELCHGIGGLLT 724
Query: 653 PCAGDPHP-PVFRSPVASMEDIMGNQVLCAIYKLP 686
+ P + SPV +++DI N V ++K P
Sbjct: 725 SESDAVKPGQIVVSPVPTLKDINENNVCSVMFKDP 759
>gi|119630592|gb|EAX10187.1| 5'-3' exoribonuclease 2, isoform CRA_b [Homo sapiens]
Length = 979
Score = 541 bits (1395), Expect = e-151, Method: Compositional matrix adjust.
Identities = 315/718 (43%), Positives = 420/718 (58%), Gaps = 61/718 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 140 MNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNL 199
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 200 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 259
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 260 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDE 318
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 319 LADSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPH 378
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIRE AI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 379 LPSLEIRENAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKD 438
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSE 355
R K ++ + +R +P P ++ GS++AS P + Y+
Sbjct: 439 DEDSFRRRQKEKRKRMKRD---QPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYEM-- 493
Query: 356 CVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDK 415
R+ N S P+ SF +D + L + R
Sbjct: 494 ---RMQNNSSPSISPN-------------------TSFTSDGS------PSPLGGIKRKA 525
Query: 416 SDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYY 475
D+ + P ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YY
Sbjct: 526 EDSDSEPEP-EDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYY 582
Query: 476 YEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEH 534
Y+G SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP
Sbjct: 583 YQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPS 642
Query: 535 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 594
+RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE
Sbjct: 643 WRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEE 702
Query: 595 ARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPC 654
RRNS+ D+LFV HPL I L Q E VEV PEL G+ G S
Sbjct: 703 TRRNSLGGDVLFVGKHHPLHDFILEL----YQTGSTEPVEVP----PELCHGIQGKFSLD 754
Query: 655 AGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHV--------TRPPAGVIFP 702
P + SPV + D+ N V+ +K P A ++ R PA V+ P
Sbjct: 755 EEAILPDQIVCSPVPMLRDLTQNTVVSINFKDPQFAEDYIFKAVMLPGARKPAAVLKP 812
>gi|73991017|ref|XP_534324.2| PREDICTED: 5'-3' exoribonuclease 2 isoform 2 [Canis lupus
familiaris]
Length = 950
Score = 541 bits (1395), Expect = e-151, Method: Compositional matrix adjust.
Identities = 318/738 (43%), Positives = 427/738 (57%), Gaps = 68/738 (9%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 111 MNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 171 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 231 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDE 289
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 290 LADSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIREGAI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 350 LPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKD 409
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSE 355
R K ++ + +R +P P ++ GS++AS P + Y+
Sbjct: 410 DEDSFRRRQKEKRKRMKRD---QPAFSPGGILTPHALGSRNSPGSQVASNPRQAAYEM-- 464
Query: 356 CVGRLDNGKGTSGRPH-KVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRD 414
R+ N S P+ S + IG +AE+S
Sbjct: 465 ---RMQNNSSPSISPNTSFTSDGSPSPIGGIKRKAEDS---------------------- 499
Query: 415 KSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 474
+S+ ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ Y
Sbjct: 500 -----DSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRY 552
Query: 475 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPE 533
YY+G SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP
Sbjct: 553 YYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPP 612
Query: 534 HYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEE 593
+RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT E
Sbjct: 613 SWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPE 672
Query: 594 EARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISP 653
E +RNS+ D+LFV HPL I L Q E V+V PEL G+ G S
Sbjct: 673 ETKRNSLGGDVLFVGKHHPLHDFILEL----YQTGSTEPVDVP----PELCHGIQGKFSL 724
Query: 654 CAGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHVTRPPAGVIFPKKIVQLEDL 711
P + SPV + D+ N + +K P A ++ + V+ P
Sbjct: 725 DEEAVLPDQIVCSPVPMLRDLTQNAAISINFKDPQFAEDYIFK---AVMLPGA------R 775
Query: 712 KPAPVL----WHEDSGRR 725
KP PVL W + S R
Sbjct: 776 KPTPVLKPSDWEKSSNGR 793
>gi|345789898|ref|XP_003433291.1| PREDICTED: 5'-3' exoribonuclease 2 [Canis lupus familiaris]
Length = 874
Score = 541 bits (1395), Expect = e-151, Method: Compositional matrix adjust.
Identities = 318/738 (43%), Positives = 427/738 (57%), Gaps = 68/738 (9%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 35 MNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNL 94
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 95 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 154
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 155 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDE 213
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 214 LADSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPH 273
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIREGAI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 274 LPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKD 333
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSE 355
R K ++ + +R +P P ++ GS++AS P + Y+
Sbjct: 334 DEDSFRRRQKEKRKRMKRD---QPAFSPGGILTPHALGSRNSPGSQVASNPRQAAYEM-- 388
Query: 356 CVGRLDNGKGTSGRPH-KVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRD 414
R+ N S P+ S + IG +AE+S
Sbjct: 389 ---RMQNNSSPSISPNTSFTSDGSPSPIGGIKRKAEDS---------------------- 423
Query: 415 KSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 474
+S+ ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ Y
Sbjct: 424 -----DSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRY 476
Query: 475 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPE 533
YY+G SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP
Sbjct: 477 YYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPP 536
Query: 534 HYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEE 593
+RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT E
Sbjct: 537 SWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPE 596
Query: 594 EARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISP 653
E +RNS+ D+LFV HPL I L Q E V+V PEL G+ G S
Sbjct: 597 ETKRNSLGGDVLFVGKHHPLHDFILEL----YQTGSTEPVDVP----PELCHGIQGKFSL 648
Query: 654 CAGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHVTRPPAGVIFPKKIVQLEDL 711
P + SPV + D+ N + +K P A ++ + V+ P
Sbjct: 649 DEEAVLPDQIVCSPVPMLRDLTQNAAISINFKDPQFAEDYIFK---AVMLPGA------R 699
Query: 712 KPAPVL----WHEDSGRR 725
KP PVL W + S R
Sbjct: 700 KPTPVLKPSDWEKSSNGR 717
>gi|413924952|gb|AFW64884.1| hypothetical protein ZEAMMB73_783884 [Zea mays]
Length = 893
Score = 541 bits (1395), Expect = e-151, Method: Compositional matrix adjust.
Identities = 300/745 (40%), Positives = 423/745 (56%), Gaps = 74/745 (9%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLP--PKSDSQVFDSNVITPGTEFMA 58
MNQQRSRRF+A+K+A D+ EE+ LR++F EGR++ P+ +V D N+ITPGTEFM
Sbjct: 114 MNQQRSRRFKAAKEAKDAELEEKLLREKFRAEGREVRARPRETHEVSDPNIITPGTEFME 173
Query: 59 VLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHC 118
LS AL+YY+ RLN+DPGW+ IKVILSD+NVPGEGEHK+MS++R QR+L YDPNT HC
Sbjct: 174 KLSKALEYYVRSRLNSDPGWKGIKVILSDSNVPGEGEHKVMSFIRGQRSLASYDPNTMHC 233
Query: 119 LYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEF 178
LYGLDADLIMLALA+HE+HFSILRE Q +KC + E +++ G F
Sbjct: 234 LYGLDADLIMLALASHELHFSILREDGSRQSQPEKCI---SLSNEMLKTEDSSRKCRGWF 290
Query: 179 DEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFL 238
+ + PKKPYQF++IW LREYL+ + +IPNP + D+E ++DDFIF+CF GNDF+
Sbjct: 291 PQVIE--TTPKKPYQFVNIWVLREYLELDLKIPNPVVKTDIERLIDDFIFICFLTGNDFI 348
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSK--------PSLRRVEHFIQAVGSY 290
P +P++EI EGAI+LL+ YK+ F +GGY+ K + R+E F +
Sbjct: 349 PRIPSVEIHEGAIDLLLEAYKQTFNKMGGYIVSTEKLKDKHAAYLKVSRLEKFFHELSLC 408
Query: 291 EDRIFQKRARLHQRHAERIKREKAQARRGDDVEPLAQ-PDSLVPVSRFHGSRLASGPSPS 349
E++IF KR L + + R+ A+ + + + + + D L ++ S S
Sbjct: 409 EEKIFLKRYDLRESLQRKFLRQAAEECKETNYDTMEENTDGL----NLTAKSFSTNCSIS 464
Query: 350 PYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLK 409
Y Q E+D + N E + LK
Sbjct: 465 TYSQD---------------------------------------ESDVKANTLELRRNLK 485
Query: 410 ELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLC 469
+ LR+K D S + + D ++LG GWK RYY EKF + E + + D+V RY EGLC
Sbjct: 486 DALRNKQDLIKSGSCKHDMIRLGLAGWKSRYYREKFGVEKLSEVGKLKNDMVQRYMEGLC 545
Query: 470 WVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSH 529
WV+ YY+ V SW W+YPY++APFASD K L QF I F P KPF+QL+ V P SS
Sbjct: 546 WVLQYYFTDVPSWSWYYPYYHAPFASDFKGLSQFKICFTTDKPLKPFDQLMAVLPKESSC 605
Query: 530 ALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHT 589
ALP+ YR+LM + S + FYP+D ++D +GKR+ WQGIA LPFIDE L+ K +E
Sbjct: 606 ALPKCYRELMENEESLVQKFYPSDLQIDTHGKRFLWQGIAMLPFIDEKLLVSATKTVEGK 665
Query: 590 LTEEEARRNSIMADMLFVLLSHPL--SASIYTLDEHCKQLKIKERVEVKERLNPELSDGM 647
L E RN++ + +F+ S+ + S ++ C K+ L+P S+ +
Sbjct: 666 LAVHEINRNAVRQEKIFMRNSNTTVPNGSAFSKAFDCSSKKL--------WLDPSTSE-L 716
Query: 648 NGYISPCAG-DPHPPVFRSPVA-SMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKI 705
G++SP D F S V + DI +Q + ++ P+A + + R V P+K
Sbjct: 717 GGWLSPVDDKDTSSGFFHSSVMRDLPDIRNDQTISFLFSNPEAVETIPRLLDDVKKPEKT 776
Query: 706 VQLEDLKPAPVLWHEDSG-RRPHEN 729
+ ++ P LWH G R P N
Sbjct: 777 ITETEISKRP-LWHTYPGCRLPETN 800
>gi|351715914|gb|EHB18833.1| 5'-3' exoribonuclease 2 [Heterocephalus glaber]
Length = 950
Score = 541 bits (1395), Expect = e-151, Method: Compositional matrix adjust.
Identities = 317/713 (44%), Positives = 415/713 (58%), Gaps = 51/713 (7%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 111 MNQQRSRRFRASKEGMEAAIEKQRVREEIMAKGGYLPPEEIKERFDSNCITPGTEFMDNL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 171 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 231 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDE 289
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
GD + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 290 LGDSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIREGAI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 350 LPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKD 409
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRL 360
R K ++ + +R QP + P L S SP
Sbjct: 410 DEDSFRRRQKEKRKRMKRD-------QP-AFTPSGILTPHALGSRNSP------------ 449
Query: 361 DNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFN 420
G S P + T + V SF +D + L + R D+ +
Sbjct: 450 --GSQVSSNPRQAAYEMRMQTNSSPSVSPNTSFTSDGS------PSPLGGIKRKAEDSDS 501
Query: 421 SDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVC 480
P ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YYY+G
Sbjct: 502 EPEP-EDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYYYQGCA 558
Query: 481 SWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLM 539
SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP +RKLM
Sbjct: 559 SWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLM 618
Query: 540 TDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 599
+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE RRNS
Sbjct: 619 SDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEENRRNS 678
Query: 600 IMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPH 659
+ AD+LFV H L I L Q E V+V PEL G+ G S
Sbjct: 679 LGADVLFVGKHHQLHDFISEL----YQTGSTEPVDVP----PELCHGIQGKFSLDEEAVL 730
Query: 660 PP-VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHV--------TRPPAGVIFP 702
P V SPV + D+ N + +K P A +V R PA V+ P
Sbjct: 731 PDQVVCSPVPMLRDLTQNTAISINFKDPQFAEDYVFKAVMLPGARKPAAVLKP 783
>gi|301775465|ref|XP_002923152.1| PREDICTED: 5'-3' exoribonuclease 2-like [Ailuropoda melanoleuca]
Length = 950
Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust.
Identities = 319/734 (43%), Positives = 427/734 (58%), Gaps = 60/734 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 111 MNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 171 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 231 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDE 289
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 290 LADSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIREGAI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 350 LPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKD 409
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPS-PSPYQQSECVGR 359
R K ++ + +R +P P ++ GSR + G S +Q+ R
Sbjct: 410 DEDSFRRRQKEKRKRMKRD---QPAFSPGGIL-TPHALGSRNSPGSQVASNLRQAAYEMR 465
Query: 360 LDNGKGTSGRPH-KVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDA 418
+ N S P+ S + IG +AE+S
Sbjct: 466 MQNNSSPSVSPNTSFTSDGSPSPIGGIKRKAEDS-------------------------- 499
Query: 419 FNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEG 478
+S+ ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YYY+G
Sbjct: 500 -DSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYYYQG 556
Query: 479 VCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRK 537
SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP +RK
Sbjct: 557 CASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRK 616
Query: 538 LMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARR 597
LM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE +R
Sbjct: 617 LMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETKR 676
Query: 598 NSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGD 657
NS+ D+LFV HPL I L Q E V+V PEL G+ G S
Sbjct: 677 NSLGGDVLFVGKHHPLHDFILEL----YQTGSTELVDVP----PELCHGIQGKFSLDEEA 728
Query: 658 PHPP-VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHVTRPPAGVIFPKKIVQLEDLKPAP 715
P + SPV + D+ N + +K P A ++ + V+ P KPAP
Sbjct: 729 VLPDQIVCSPVPMLRDLTQNTAISINFKDPQFAEDYIFK---AVMLPGA------RKPAP 779
Query: 716 VL----WHEDSGRR 725
VL W + S R
Sbjct: 780 VLKPSDWEKSSNGR 793
>gi|402883351|ref|XP_003905183.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 1 [Papio anubis]
gi|355784737|gb|EHH65588.1| 5'-3' exoribonuclease 2 [Macaca fascicularis]
gi|380810654|gb|AFE77202.1| 5'-3' exoribonuclease 2 [Macaca mulatta]
gi|383416591|gb|AFH31509.1| 5'-3' exoribonuclease 2 [Macaca mulatta]
gi|384945858|gb|AFI36534.1| 5'-3' exoribonuclease 2 [Macaca mulatta]
Length = 950
Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust.
Identities = 314/719 (43%), Positives = 420/719 (58%), Gaps = 63/719 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 111 MNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 171 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 231 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDE 289
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 290 LADSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIRE AI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 350 LPSLEIRENAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKD 409
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSE 355
R K ++ + +R +P P ++ GS++AS P + Y+
Sbjct: 410 DEDSFRRRQKEKRKRMKRD---QPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYEM-- 464
Query: 356 CVGRLDNGKGTSGRPH-KVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRD 414
R+ N S P+ S + IG +AE+S
Sbjct: 465 ---RMQNNSSPSISPNTSFTSDGSPSPIGGIKRKAEDS---------------------- 499
Query: 415 KSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 474
+S+ ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ Y
Sbjct: 500 -----DSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRY 552
Query: 475 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPE 533
YY+G SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP
Sbjct: 553 YYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPP 612
Query: 534 HYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEE 593
+RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT E
Sbjct: 613 SWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPE 672
Query: 594 EARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISP 653
E RRNS+ D+LFV HPL I L Q E V+V PEL G+ G S
Sbjct: 673 ETRRNSLGGDVLFVGKHHPLHDFILEL----YQTGSTEPVDVP----PELCHGIQGKFSL 724
Query: 654 CAGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHV--------TRPPAGVIFP 702
P + SPV + D+ N V+ +K P A ++ R PA V+ P
Sbjct: 725 DEEAILPDQIVCSPVPMLRDLTQNTVVSINFKDPQFAEDYIFKAVMLPGARKPAAVLKP 783
>gi|395851965|ref|XP_003798517.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 1 [Otolemur garnettii]
Length = 951
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 316/735 (42%), Positives = 427/735 (58%), Gaps = 61/735 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 111 MNQQRSRRFRASKEGMEAALEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGWE + VILSDA+VPGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 171 AKCLRYYIADRLNNDPGWENLTVILSDASVPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 231 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDE 289
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 290 LADSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIREGAI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 350 LPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKD 409
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSE 355
R K ++ + +R +P P ++ GS++AS P + Y+
Sbjct: 410 DEDSFRRRQKEKRKRMKRD---QPAFTPSGILTPHALSSRNSPGSQVASNPRHAAYEM-- 464
Query: 356 CVGRLDNGKGTSGRPHKVPRLSSG--ATIGAAIVEAENSFETDPQENKEEFKAKLKELLR 413
R+ N + S G + +G +AE+S
Sbjct: 465 ---RMQNNNCSPSISPNTSFTSDGSPSPVGGIKRKAEDS--------------------- 500
Query: 414 DKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMH 473
+S+ ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+
Sbjct: 501 ------DSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLR 552
Query: 474 YYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALP 532
YYY+G SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP
Sbjct: 553 YYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLP 612
Query: 533 EHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTE 592
+RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT
Sbjct: 613 PSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTP 672
Query: 593 EEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYIS 652
EE +RNS+ +D+LFV HPL I L Q E V+V PEL G+ G S
Sbjct: 673 EETKRNSLGSDVLFVGKRHPLHDFIVEL----YQTGSTEPVDVP----PELCHGIQGKFS 724
Query: 653 PCAGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHVTRPPAGVIFPKKIVQLED 710
P + SPV + D+ N + +K P A ++ + V+ P
Sbjct: 725 LDEEAILPDQIVCSPVPMLRDLTQNTAVSINFKDPQFAEDYIFK---AVMLPGARKPATV 781
Query: 711 LKPAPVLWHEDSGRR 725
LKP+ W + S R
Sbjct: 782 LKPSD--WEKSSNGR 794
>gi|332238206|ref|XP_003268294.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 2 [Nomascus leucogenys]
Length = 896
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 314/719 (43%), Positives = 420/719 (58%), Gaps = 63/719 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 57 MNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNL 116
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 117 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 176
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 177 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDE 235
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 236 LADSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPH 295
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIRE AI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 296 LPSLEIRENAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKD 355
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSE 355
R K ++ + +R +P P ++ GS++AS P + Y+
Sbjct: 356 DEDSFRRRQKEKRKRMKRD---QPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYEM-- 410
Query: 356 CVGRLDNGKGTSGRPH-KVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRD 414
R+ N S P+ S + IG +AE+S
Sbjct: 411 ---RMQNNSSPSISPNTSFTSDGSPSPIGGIKRKAEDS---------------------- 445
Query: 415 KSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 474
+S+ ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ Y
Sbjct: 446 -----DSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRY 498
Query: 475 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPE 533
YY+G SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP
Sbjct: 499 YYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPP 558
Query: 534 HYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEE 593
+RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT E
Sbjct: 559 SWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPE 618
Query: 594 EARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISP 653
E RRNS+ D+LFV HPL I L Q E V+V PEL G+ G S
Sbjct: 619 ETRRNSLGGDVLFVGKHHPLHDFILEL----YQTGSTEPVDVP----PELCHGIQGRFSL 670
Query: 654 CAGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHV--------TRPPAGVIFP 702
P + SPV + D+ N V+ +K P A ++ R PA V+ P
Sbjct: 671 DEEAILPDQIVCSPVPMLRDLTQNTVVSINFKDPQFAEDYIFKAVMLPGARKPAAVLKP 729
>gi|332238204|ref|XP_003268293.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 1 [Nomascus leucogenys]
Length = 950
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 314/719 (43%), Positives = 420/719 (58%), Gaps = 63/719 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 111 MNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 171 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 231 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDE 289
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 290 LADSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIRE AI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 350 LPSLEIRENAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKD 409
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSE 355
R K ++ + +R +P P ++ GS++AS P + Y+
Sbjct: 410 DEDSFRRRQKEKRKRMKRD---QPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYEM-- 464
Query: 356 CVGRLDNGKGTSGRPH-KVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRD 414
R+ N S P+ S + IG +AE+S
Sbjct: 465 ---RMQNNSSPSISPNTSFTSDGSPSPIGGIKRKAEDS---------------------- 499
Query: 415 KSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 474
+S+ ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ Y
Sbjct: 500 -----DSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRY 552
Query: 475 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPE 533
YY+G SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP
Sbjct: 553 YYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPP 612
Query: 534 HYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEE 593
+RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT E
Sbjct: 613 SWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPE 672
Query: 594 EARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISP 653
E RRNS+ D+LFV HPL I L Q E V+V PEL G+ G S
Sbjct: 673 ETRRNSLGGDVLFVGKHHPLHDFILEL----YQTGSTEPVDVP----PELCHGIQGRFSL 724
Query: 654 CAGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHV--------TRPPAGVIFP 702
P + SPV + D+ N V+ +K P A ++ R PA V+ P
Sbjct: 725 DEEAILPDQIVCSPVPMLRDLTQNTVVSINFKDPQFAEDYIFKAVMLPGARKPAAVLKP 783
>gi|402883355|ref|XP_003905185.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 3 [Papio anubis]
Length = 874
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 314/719 (43%), Positives = 420/719 (58%), Gaps = 63/719 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 35 MNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNL 94
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 95 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 154
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 155 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDE 213
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 214 LADSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPH 273
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIRE AI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 274 LPSLEIRENAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKD 333
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSE 355
R K ++ + +R +P P ++ GS++AS P + Y+
Sbjct: 334 DEDSFRRRQKEKRKRMKRD---QPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYEM-- 388
Query: 356 CVGRLDNGKGTSGRPH-KVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRD 414
R+ N S P+ S + IG +AE+S
Sbjct: 389 ---RMQNNSSPSISPNTSFTSDGSPSPIGGIKRKAEDS---------------------- 423
Query: 415 KSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 474
+S+ ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ Y
Sbjct: 424 -----DSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRY 476
Query: 475 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPE 533
YY+G SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP
Sbjct: 477 YYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPP 536
Query: 534 HYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEE 593
+RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT E
Sbjct: 537 SWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPE 596
Query: 594 EARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISP 653
E RRNS+ D+LFV HPL I L Q E V+V PEL G+ G S
Sbjct: 597 ETRRNSLGGDVLFVGKHHPLHDFILEL----YQTGSTEPVDVP----PELCHGIQGKFSL 648
Query: 654 CAGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHV--------TRPPAGVIFP 702
P + SPV + D+ N V+ +K P A ++ R PA V+ P
Sbjct: 649 DEEAILPDQIVCSPVPMLRDLTQNTVVSINFKDPQFAEDYIFKAVMLPGARKPAAVLKP 707
>gi|403283599|ref|XP_003933202.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 874
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 314/719 (43%), Positives = 420/719 (58%), Gaps = 63/719 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 35 MNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNL 94
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 95 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 154
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 155 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDE 213
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 214 LADSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPH 273
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIREGAI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 274 LPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKD 333
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSE 355
R K ++ + +R +P P ++ S++AS P + Y+
Sbjct: 334 DEDSFRRRQKEKRKRMKRD---QPAFTPTGILTPHALGSRNSPSSQVASNPRQAAYEM-- 388
Query: 356 CVGRLDNGKGTSGRPH-KVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRD 414
R+ N S P+ S + IG +AE+S
Sbjct: 389 ---RMQNNSSPSVSPNTSFTSDGSPSPIGGIKRKAEDS---------------------- 423
Query: 415 KSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 474
+S+ ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ Y
Sbjct: 424 -----DSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRY 476
Query: 475 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPE 533
YY+G SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP
Sbjct: 477 YYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPP 536
Query: 534 HYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEE 593
+RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT E
Sbjct: 537 SWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPE 596
Query: 594 EARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISP 653
E RRNS+ D+LFV HPL I L Q E V+V PEL G+ G S
Sbjct: 597 ETRRNSLGGDVLFVGKHHPLHDFILEL----YQTGSTEPVDVP----PELCHGIQGKFSL 648
Query: 654 CAGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHV--------TRPPAGVIFP 702
P + SPV + D+ N V+ +K P A ++ R PA V+ P
Sbjct: 649 DEEAILPDRIVCSPVPMLRDLTQNTVVSINFKDPQFAEDYIFKAVMLPGARKPAAVLKP 707
>gi|403283597|ref|XP_003933201.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 950
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 316/720 (43%), Positives = 421/720 (58%), Gaps = 65/720 (9%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 111 MNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 171 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 231 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDE 289
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 290 LADSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIREGAI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 350 LPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKD 409
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSR------LASGPSPSPYQQS 354
R K ++ + +R +P P ++ GSR +AS P + Y+
Sbjct: 410 DEDSFRRRQKEKRKRMKRD---QPAFTPTGIL-TPHALGSRNSPSSQVASNPRQAAYEM- 464
Query: 355 ECVGRLDNGKGTSGRPH-KVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLR 413
R+ N S P+ S + IG +AE+S
Sbjct: 465 ----RMQNNSSPSVSPNTSFTSDGSPSPIGGIKRKAEDS--------------------- 499
Query: 414 DKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMH 473
+S+ ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+
Sbjct: 500 ------DSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLR 551
Query: 474 YYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALP 532
YYY+G SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP
Sbjct: 552 YYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLP 611
Query: 533 EHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTE 592
+RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT
Sbjct: 612 PSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTP 671
Query: 593 EEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYIS 652
EE RRNS+ D+LFV HPL I L Q E V+V PEL G+ G S
Sbjct: 672 EETRRNSLGGDVLFVGKHHPLHDFILEL----YQTGSTEPVDVP----PELCHGIQGKFS 723
Query: 653 PCAGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHV--------TRPPAGVIFP 702
P + SPV + D+ N V+ +K P A ++ R PA V+ P
Sbjct: 724 LDEEAILPDRIVCSPVPMLRDLTQNTVVSINFKDPQFAEDYIFKAVMLPGARKPAAVLKP 783
>gi|332858058|ref|XP_001145394.2| PREDICTED: 5'-3' exoribonuclease 2 isoform 4 [Pan troglodytes]
gi|397478695|ref|XP_003810675.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 2 [Pan paniscus]
Length = 874
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 314/718 (43%), Positives = 420/718 (58%), Gaps = 61/718 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 35 MNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNL 94
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 95 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 154
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 155 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDE 213
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 214 LADSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPH 273
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIRE AI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 274 LPSLEIRENAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKD 333
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSE 355
R K ++ + +R +P P ++ GS++AS P + Y+
Sbjct: 334 DEDSFRRRQKEKRKRMKRD---QPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYEM-- 388
Query: 356 CVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDK 415
R+ N S P+ SF +D + L + R
Sbjct: 389 ---RMQNNSSPSISPN-------------------TSFTSDGS------PSPLGGIKRKA 420
Query: 416 SDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYY 475
D+ + P ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YY
Sbjct: 421 EDSDSEPEP-EDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYY 477
Query: 476 YEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEH 534
Y+G SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP
Sbjct: 478 YQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPS 537
Query: 535 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 594
+RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE
Sbjct: 538 WRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEE 597
Query: 595 ARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPC 654
RRNS+ D+LFV HPL I L Q E V+V PEL G+ G S
Sbjct: 598 TRRNSLGGDVLFVGKHHPLHDFILEL----YQTGSTEPVDVP----PELCHGIQGKFSLD 649
Query: 655 AGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHV--------TRPPAGVIFP 702
P + SPV + D+ N V+ +K P A ++ R PA V+ P
Sbjct: 650 EEAILPDQIVCSPVPMLRDLTQNTVVSINFKDPQFAEDYIFKAVMLPGARKPAAVLKP 707
>gi|114681219|ref|XP_514546.2| PREDICTED: 5'-3' exoribonuclease 2 isoform 7 [Pan troglodytes]
gi|397478693|ref|XP_003810674.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 1 [Pan paniscus]
gi|410223814|gb|JAA09126.1| 5'-3' exoribonuclease 2 [Pan troglodytes]
gi|410252370|gb|JAA14152.1| 5'-3' exoribonuclease 2 [Pan troglodytes]
gi|410308366|gb|JAA32783.1| 5'-3' exoribonuclease 2 [Pan troglodytes]
gi|410334533|gb|JAA36213.1| 5'-3' exoribonuclease 2 [Pan troglodytes]
Length = 950
Score = 541 bits (1393), Expect = e-150, Method: Compositional matrix adjust.
Identities = 314/718 (43%), Positives = 420/718 (58%), Gaps = 61/718 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 111 MNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 171 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 231 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDE 289
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 290 LADSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIRE AI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 350 LPSLEIRENAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKD 409
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSE 355
R K ++ + +R +P P ++ GS++AS P + Y+
Sbjct: 410 DEDSFRRRQKEKRKRMKRD---QPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYEM-- 464
Query: 356 CVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDK 415
R+ N S P+ SF +D + L + R
Sbjct: 465 ---RMQNNSSPSISPN-------------------TSFTSDGS------PSPLGGIKRKA 496
Query: 416 SDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYY 475
D+ + P ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YY
Sbjct: 497 EDSDSEPEP-EDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYY 553
Query: 476 YEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEH 534
Y+G SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP
Sbjct: 554 YQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPS 613
Query: 535 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 594
+RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE
Sbjct: 614 WRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEE 673
Query: 595 ARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPC 654
RRNS+ D+LFV HPL I L Q E V+V PEL G+ G S
Sbjct: 674 TRRNSLGGDVLFVGKHHPLHDFILEL----YQTGSTEPVDVP----PELCHGIQGKFSLD 725
Query: 655 AGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHV--------TRPPAGVIFP 702
P + SPV + D+ N V+ +K P A ++ R PA V+ P
Sbjct: 726 EEAILPDQIVCSPVPMLRDLTQNTVVSINFKDPQFAEDYIFKAVMLPGARKPAAVLKP 783
>gi|281339379|gb|EFB14963.1| hypothetical protein PANDA_012248 [Ailuropoda melanoleuca]
Length = 929
Score = 541 bits (1393), Expect = e-150, Method: Compositional matrix adjust.
Identities = 319/734 (43%), Positives = 427/734 (58%), Gaps = 60/734 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 111 MNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 171 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 231 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDE 289
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 290 LADSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIREGAI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 350 LPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKD 409
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPS-PSPYQQSECVGR 359
R K ++ + +R +P P ++ GSR + G S +Q+ R
Sbjct: 410 DEDSFRRRQKEKRKRMKRD---QPAFSPGGIL-TPHALGSRNSPGSQVASNLRQAAYEMR 465
Query: 360 LDNGKGTSGRPH-KVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDA 418
+ N S P+ S + IG +AE+S
Sbjct: 466 MQNNSSPSVSPNTSFTSDGSPSPIGGIKRKAEDS-------------------------- 499
Query: 419 FNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEG 478
+S+ ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YYY+G
Sbjct: 500 -DSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYYYQG 556
Query: 479 VCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRK 537
SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP +RK
Sbjct: 557 CASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRK 616
Query: 538 LMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARR 597
LM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE +R
Sbjct: 617 LMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETKR 676
Query: 598 NSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGD 657
NS+ D+LFV HPL I L Q E V+V PEL G+ G S
Sbjct: 677 NSLGGDVLFVGKHHPLHDFILEL----YQTGSTELVDVP----PELCHGIQGKFSLDEEA 728
Query: 658 PHPP-VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHVTRPPAGVIFPKKIVQLEDLKPAP 715
P + SPV + D+ N + +K P A ++ + V+ P KPAP
Sbjct: 729 VLPDQIVCSPVPMLRDLTQNTAISINFKDPQFAEDYIFK---AVMLPGA------RKPAP 779
Query: 716 VL----WHEDSGRR 725
VL W + S R
Sbjct: 780 VLKPSDWEKSSNGR 793
>gi|332238208|ref|XP_003268295.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 3 [Nomascus leucogenys]
Length = 874
Score = 540 bits (1392), Expect = e-150, Method: Compositional matrix adjust.
Identities = 314/719 (43%), Positives = 420/719 (58%), Gaps = 63/719 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 35 MNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNL 94
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 95 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 154
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 155 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDE 213
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 214 LADSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPH 273
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIRE AI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 274 LPSLEIRENAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKD 333
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSE 355
R K ++ + +R +P P ++ GS++AS P + Y+
Sbjct: 334 DEDSFRRRQKEKRKRMKRD---QPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYEM-- 388
Query: 356 CVGRLDNGKGTSGRPH-KVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRD 414
R+ N S P+ S + IG +AE+S
Sbjct: 389 ---RMQNNSSPSISPNTSFTSDGSPSPIGGIKRKAEDS---------------------- 423
Query: 415 KSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 474
+S+ ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ Y
Sbjct: 424 -----DSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRY 476
Query: 475 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPE 533
YY+G SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP
Sbjct: 477 YYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPP 536
Query: 534 HYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEE 593
+RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT E
Sbjct: 537 SWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPE 596
Query: 594 EARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISP 653
E RRNS+ D+LFV HPL I L Q E V+V PEL G+ G S
Sbjct: 597 ETRRNSLGGDVLFVGKHHPLHDFILEL----YQTGSTEPVDVP----PELCHGIQGRFSL 648
Query: 654 CAGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHV--------TRPPAGVIFP 702
P + SPV + D+ N V+ +K P A ++ R PA V+ P
Sbjct: 649 DEEAILPDQIVCSPVPMLRDLTQNTVVSINFKDPQFAEDYIFKAVMLPGARKPAAVLKP 707
>gi|71895763|ref|NP_001026204.1| 5'-3' exoribonuclease 2 [Gallus gallus]
gi|75571238|sp|Q5ZIP4.1|XRN2_CHICK RecName: Full=5'-3' exoribonuclease 2
gi|53135140|emb|CAG32399.1| hypothetical protein RCJMB04_24h23 [Gallus gallus]
Length = 949
Score = 540 bits (1392), Expect = e-150, Method: Compositional matrix adjust.
Identities = 328/798 (41%), Positives = 449/798 (56%), Gaps = 62/798 (7%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++++RQE +G LPP+ + FDSN ITPGTEFM L
Sbjct: 111 MNQQRSRRFRASKEGMEAAEEKQKIRQEILAKGGILPPEEVKERFDSNCITPGTEFMDNL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLN+DPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 171 AKCLRYYIADRLNSDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE HF+I+RE F P + C LC Q GH +C+G + K G+ D+
Sbjct: 231 GADADLIMLGLATHEPHFTIIRE-EFKPNKPKPCALCNQMGHEVKDCQGLPREKQGKHDQ 289
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + ++ + F+ + LREYL+ E + + PF D E VDD++FMCFFVGNDFLPH
Sbjct: 290 FADSLPASEQEFIFIRLCVLREYLERELTMASLPFTFDFERSVDDWVFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIREGAI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 350 LPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGFVNLQRVQMIMLAVGEVEDSIFKKRKD 409
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRL 360
R K +K + +R S +P +F L + SP +
Sbjct: 410 DDDNFKRRQKEKKKRMKRDH--------PSFIPGGQFSPQALGNRSSPQ---------AI 452
Query: 361 DNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQE--NKEEFKAKLKELLRDKSDA 418
N + T+ + + +NS + P N + + + + R D+
Sbjct: 453 SNPRQTA--------------FEMRMHDRQNSTMSSPNTSLNSDGSPSPARGIKRKSEDS 498
Query: 419 FNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEG 478
+ P ED ++L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YYY+G
Sbjct: 499 DSEPEP-EDNIRLWESGWKQRYYKNKFDVDASDEK--FRRKVVQSYVEGLCWVLRYYYQG 555
Query: 479 VCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRK 537
SW W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP +RK
Sbjct: 556 CASWNWYYPFHYAPFASDFEGIADMPSDFEKGSKPFKPLEQLMGVFPAASGNFLPPTWRK 615
Query: 538 LMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARR 597
LMTDP S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE RR
Sbjct: 616 LMTDPESSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEENRR 675
Query: 598 NSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGD 657
NS+ D+LFV HPL I +Q K K V + PEL G+ G ++P
Sbjct: 676 NSLGGDVLFVGKHHPLCDFI------VEQYKSKNTEPVD--MPPELCYGIQGKLTPNENA 727
Query: 658 PHP-PVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKPAPV 716
P SPV + D+ N + +K P + IF K V KP PV
Sbjct: 728 VLPDKTVESPVPMLRDLTQNSAVSISFKDPQFDED-------FIF-KATVLPGAKKPPPV 779
Query: 717 LWHEDSGRRPHENGRHNPH-GTISGRQ---LGEAAHRLVANSLQHMKVDRNGYGDRMHGS 772
L D + ++ P G R+ L ++A R + ++ M +R G +
Sbjct: 780 LKPGDWEKTNNDGRPWRPQLGFNRDRKPVHLDQSAFRTLGHA---MPRERGMPGMYANAV 836
Query: 773 PLPYAAAPYVPPVPSYQE 790
PL +PY P+ S Q+
Sbjct: 837 PLGAYGSPYTRPLMSGQQ 854
>gi|338719282|ref|XP_001489345.3| PREDICTED: 5'-3' exoribonuclease 2 isoform 1 [Equus caballus]
Length = 874
Score = 540 bits (1391), Expect = e-150, Method: Compositional matrix adjust.
Identities = 319/738 (43%), Positives = 426/738 (57%), Gaps = 68/738 (9%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 35 MNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNL 94
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 95 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 154
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 155 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDE 213
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 214 LADSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPH 273
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIREGAI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 274 LPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKD 333
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSE 355
R K ++ + +R +P P ++ GS++AS P + Y+
Sbjct: 334 DEDSFRRRQKEKRKRMKRD---QPAFTPGGILTPHALGSRNSPGSQVASNPRQAAYEM-- 388
Query: 356 CVGRLDNGKGTSGRPH-KVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRD 414
R+ N S P+ S + IG +AE+S
Sbjct: 389 ---RMQNNSSPSVSPNASFTSDGSPSPIGGIKRKAEDS---------------------- 423
Query: 415 KSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 474
+S+ ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ Y
Sbjct: 424 -----DSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRY 476
Query: 475 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPE 533
YY+G SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP
Sbjct: 477 YYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPP 536
Query: 534 HYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEE 593
+RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT E
Sbjct: 537 SWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPE 596
Query: 594 EARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISP 653
E RRNS+ D+LFV HPL I L Q E V V PEL + G S
Sbjct: 597 ETRRNSLGGDVLFVGKHHPLHDFIVEL----YQTGSTEPVGVP----PELCHEIQGKFSL 648
Query: 654 CAGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHVTRPPAGVIFPKKIVQLEDL 711
P + SPV + D+ N + +K P A ++ + V+ P
Sbjct: 649 DEEAILPDQIVCSPVPMLRDLAQNTAISVNFKDPQFAEDYIFK---AVMLPGA------R 699
Query: 712 KPAPVL----WHEDSGRR 725
KPAPVL W + S R
Sbjct: 700 KPAPVLKPSDWEKSSNGR 717
>gi|348518303|ref|XP_003446671.1| PREDICTED: 5'-3' exoribonuclease 2 [Oreochromis niloticus]
Length = 982
Score = 540 bits (1391), Expect = e-150, Method: Compositional matrix adjust.
Identities = 308/723 (42%), Positives = 420/723 (58%), Gaps = 53/723 (7%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ + E+ R+R+E ++G LPP+ + FDSN ITPGTEFM L
Sbjct: 111 MNQQRSRRFRASKEGVELVEEKSRVREEVIQKGGYLPPEEIKERFDSNCITPGTEFMDNL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YY+ RL NDPGW+ I V LSDA+VPGEGEHKIM ++R QR P +DPNT HCL
Sbjct: 171 AQCLRYYVAERLTNDPGWKNIVVFLSDASVPGEGEHKIMDFIRRQRGQPNHDPNTHHCLC 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LCGQ GH C+G + K G+ DE
Sbjct: 231 GADADLIMLGLATHEPNFTIIRE-EFKPNKPRPCGLCGQTGHEIKACQGMPREKQGQHDE 289
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
+ + ++ + F+ + LREYL E + + PF D E VDD++FMCFFVGNDFLPH
Sbjct: 290 FANTMPAAEQEFIFIRLCVLREYLARELTMASLPFPFDFERSVDDWVFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIREGAI+ L+ +YK GGYLT +L RVE +QAVG ED IF+KR
Sbjct: 350 LPSLEIREGAIDRLVGIYKDVVHKTGGYLTQNGYVNLERVEMIMQAVGVAEDNIFKKR-- 407
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSE---CV 357
+ E KR + R+ + Q + + +F L P Q + C
Sbjct: 408 --KDDDENFKRRNKEKRKRMKAQ--QQGPAYLTTGQFAPHALGRRDRPEAVQNARHQACD 463
Query: 358 GRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSD 417
R+ + + ++ ++ A + N +D +++ ++ K+D
Sbjct: 464 MRMQS---------NMVNQNAAQSLKAMMKNGGNVSPSDGADSRG---------VKRKAD 505
Query: 418 AFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYE 477
+S+ ED V+L E GWK+RYY+ KF+ + E+ R+ VV Y EGLCWV+ YYY+
Sbjct: 506 DSDSEPEPEDNVRLWEEGWKQRYYKNKFDVDATD--EDFRRKVVQSYVEGLCWVLRYYYQ 563
Query: 478 GVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYR 536
G SW+W++P+HYAPFASD KD+ FE PFKP QL+GVFP+AS + LP +R
Sbjct: 564 GCASWKWYFPFHYAPFASDFKDIKDMFSDFEKNTKPFKPLEQLMGVFPAASGNFLPPTWR 623
Query: 537 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 596
LM+ P+SPI DFYP DF +D+NGK+Y+WQG+A LPF+DE RL + + LT EE R
Sbjct: 624 NLMSSPDSPIIDFYPDDFAIDLNGKKYAWQGVALLPFVDERRLRAALADVYPDLTSEEKR 683
Query: 597 RNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKE--RLNPELSDGMNGYISPC 654
RNS+ +D+LF+ SHPL I+ L R E E + EL G+ G ++
Sbjct: 684 RNSLGSDVLFLGKSHPLFDFIHEL----------YRTESNEGTEIPAELCHGIQGRLN-L 732
Query: 655 AGDPHPP--VFRSPVASMEDIMGNQVLCAIYKLPD-----AHKHVTRPPAGVIFPKKIVQ 707
DP P RSPV + D+ N + +K P K V P G P K+++
Sbjct: 733 DDDPILPDNTVRSPVPMLRDVSQNTAIGVKFKDPPYPDGFVFKAVLLP--GAKIPSKVLK 790
Query: 708 LED 710
ED
Sbjct: 791 PED 793
>gi|338719278|ref|XP_003363975.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 2 [Equus caballus]
gi|338719280|ref|XP_003363976.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 3 [Equus caballus]
Length = 896
Score = 540 bits (1390), Expect = e-150, Method: Compositional matrix adjust.
Identities = 319/738 (43%), Positives = 426/738 (57%), Gaps = 68/738 (9%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 57 MNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNL 116
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 117 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 176
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 177 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDE 235
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 236 LADSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPH 295
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIREGAI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 296 LPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKD 355
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSE 355
R K ++ + +R +P P ++ GS++AS P + Y+
Sbjct: 356 DEDSFRRRQKEKRKRMKRD---QPAFTPGGILTPHALGSRNSPGSQVASNPRQAAYEM-- 410
Query: 356 CVGRLDNGKGTSGRPH-KVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRD 414
R+ N S P+ S + IG +AE+S
Sbjct: 411 ---RMQNNSSPSVSPNASFTSDGSPSPIGGIKRKAEDS---------------------- 445
Query: 415 KSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 474
+S+ ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ Y
Sbjct: 446 -----DSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRY 498
Query: 475 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPE 533
YY+G SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP
Sbjct: 499 YYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPP 558
Query: 534 HYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEE 593
+RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT E
Sbjct: 559 SWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPE 618
Query: 594 EARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISP 653
E RRNS+ D+LFV HPL I L Q E V V PEL + G S
Sbjct: 619 ETRRNSLGGDVLFVGKHHPLHDFIVEL----YQTGSTEPVGVP----PELCHEIQGKFSL 670
Query: 654 CAGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHVTRPPAGVIFPKKIVQLEDL 711
P + SPV + D+ N + +K P A ++ + V+ P
Sbjct: 671 DEEAILPDQIVCSPVPMLRDLAQNTAISVNFKDPQFAEDYIFK---AVMLPGA------R 721
Query: 712 KPAPVL----WHEDSGRR 725
KPAPVL W + S R
Sbjct: 722 KPAPVLKPSDWEKSSNGR 739
>gi|296200314|ref|XP_002747533.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 1 [Callithrix jacchus]
Length = 950
Score = 540 bits (1390), Expect = e-150, Method: Compositional matrix adjust.
Identities = 313/719 (43%), Positives = 420/719 (58%), Gaps = 63/719 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 111 MNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 171 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 231 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDE 289
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 290 LADSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIREGAI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 350 LPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKD 409
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSE 355
R K ++ + +R +P P ++ S++A+ P + Y+
Sbjct: 410 DEDSFRRRQKEKRKRMKRD---QPAFTPTGILTPHALGSRNSPSSQVANNPRQAAYEM-- 464
Query: 356 CVGRLDNGKGTSGRPH-KVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRD 414
R+ N S P+ S + IG +AE+S
Sbjct: 465 ---RMQNNSSPSVSPNTSFTSDGSPSPIGGIKRKAEDS---------------------- 499
Query: 415 KSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 474
+S+ ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ Y
Sbjct: 500 -----DSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRY 552
Query: 475 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPE 533
YY+G SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP
Sbjct: 553 YYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPP 612
Query: 534 HYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEE 593
+RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT E
Sbjct: 613 SWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPE 672
Query: 594 EARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISP 653
E RRNS+ D+LFV HPL I L Q E V+V PEL G+ G S
Sbjct: 673 ETRRNSLGGDVLFVGKHHPLHDFILEL----YQTGSTEPVDVP----PELCHGIQGKFSL 724
Query: 654 CAGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHV--------TRPPAGVIFP 702
P + SPV + D+ N V+ +K P A ++ R PA V+ P
Sbjct: 725 DEEAILPDQIVCSPVPMLRDLTQNTVVSINFKDPQFAEDYIFKAVMLPGARKPAAVLKP 783
>gi|296200320|ref|XP_002747536.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 4 [Callithrix jacchus]
Length = 874
Score = 539 bits (1389), Expect = e-150, Method: Compositional matrix adjust.
Identities = 313/719 (43%), Positives = 420/719 (58%), Gaps = 63/719 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 35 MNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNL 94
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 95 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 154
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 155 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDE 213
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 214 LADSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPH 273
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIREGAI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 274 LPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKD 333
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSE 355
R K ++ + +R +P P ++ S++A+ P + Y+
Sbjct: 334 DEDSFRRRQKEKRKRMKRD---QPAFTPTGILTPHALGSRNSPSSQVANNPRQAAYEM-- 388
Query: 356 CVGRLDNGKGTSGRPH-KVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRD 414
R+ N S P+ S + IG +AE+S
Sbjct: 389 ---RMQNNSSPSVSPNTSFTSDGSPSPIGGIKRKAEDS---------------------- 423
Query: 415 KSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 474
+S+ ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ Y
Sbjct: 424 -----DSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRY 476
Query: 475 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPE 533
YY+G SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP
Sbjct: 477 YYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPP 536
Query: 534 HYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEE 593
+RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT E
Sbjct: 537 SWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPE 596
Query: 594 EARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISP 653
E RRNS+ D+LFV HPL I L Q E V+V PEL G+ G S
Sbjct: 597 ETRRNSLGGDVLFVGKHHPLHDFILEL----YQTGSTEPVDVP----PELCHGIQGKFSL 648
Query: 654 CAGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHV--------TRPPAGVIFP 702
P + SPV + D+ N V+ +K P A ++ R PA V+ P
Sbjct: 649 DEEAILPDQIVCSPVPMLRDLTQNTVVSINFKDPQFAEDYIFKAVMLPGARKPAAVLKP 707
>gi|5881961|gb|AAD55138.1|AF064257_1 Dhm1-like protein [Homo sapiens]
Length = 950
Score = 539 bits (1389), Expect = e-150, Method: Compositional matrix adjust.
Identities = 320/740 (43%), Positives = 427/740 (57%), Gaps = 64/740 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA K ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 111 MNQQRSRRFRAIKRGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 171 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG ++ K G+ DE
Sbjct: 231 GADADLIMLGLATHEPNFTIIRE-EFKPNRPKPCGLCNQFGHEVKDCEGLSREKKGKHDE 289
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 290 LADSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIRE AI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 350 LPSLEIRENAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKD 409
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSE 355
R K ++ + +R +P P ++ GS++AS P + Y
Sbjct: 410 DEDSFRRRQKEKRKRMKRD---QPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYDM-- 464
Query: 356 CVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDK 415
R+ N S P+ SF +D + L + R
Sbjct: 465 ---RMQNNSSPSISPN-------------------TSFTSDGS------PSPLGGIKRKA 496
Query: 416 SDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYY 475
D+ + P ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YY
Sbjct: 497 EDSDSEPEP-EDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYY 553
Query: 476 YEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEH 534
Y+G SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP
Sbjct: 554 YQGCASWKWYYPFHYAPFASDFEGIADMPSEFEKGTKPFKPLEQLMGVFPAASGNFLPPS 613
Query: 535 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 594
+RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE
Sbjct: 614 WRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEE 673
Query: 595 ARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPC 654
RRNS+ D+LFV HPL I L Q E VEV PEL G+ G S
Sbjct: 674 TRRNSLGGDVLFVGKHHPLHDFILEL----YQTGSTEPVEVP----PELCHGIQGKFSLD 725
Query: 655 AGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHVTRPPAGVIFPKKIVQLEDLK 712
P + +PV + D+ N V+ +K P A ++ + V+ P K
Sbjct: 726 EEAILPDQIVCAPVPMLRDLTQNTVVSINFKDPQFAEDYIFK---AVMLPGA------RK 776
Query: 713 PAPVLWHEDSGRRPHENGRH 732
PA VL D G+ NGR
Sbjct: 777 PAAVLKPSDWGK--SSNGRQ 794
>gi|296200318|ref|XP_002747535.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 3 [Callithrix jacchus]
Length = 896
Score = 539 bits (1389), Expect = e-150, Method: Compositional matrix adjust.
Identities = 315/720 (43%), Positives = 421/720 (58%), Gaps = 65/720 (9%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 57 MNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNL 116
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 117 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 176
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 177 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDE 235
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 236 LADSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPH 295
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIREGAI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 296 LPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKD 355
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSR------LASGPSPSPYQQS 354
R K ++ + +R +P P ++ GSR +A+ P + Y+
Sbjct: 356 DEDSFRRRQKEKRKRMKRD---QPAFTPTGIL-TPHALGSRNSPSSQVANNPRQAAYEM- 410
Query: 355 ECVGRLDNGKGTSGRPH-KVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLR 413
R+ N S P+ S + IG +AE+S
Sbjct: 411 ----RMQNNSSPSVSPNTSFTSDGSPSPIGGIKRKAEDS--------------------- 445
Query: 414 DKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMH 473
+S+ ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+
Sbjct: 446 ------DSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLR 497
Query: 474 YYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALP 532
YYY+G SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP
Sbjct: 498 YYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLP 557
Query: 533 EHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTE 592
+RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT
Sbjct: 558 PSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTP 617
Query: 593 EEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYIS 652
EE RRNS+ D+LFV HPL I L Q E V+V PEL G+ G S
Sbjct: 618 EETRRNSLGGDVLFVGKHHPLHDFILEL----YQTGSTEPVDVP----PELCHGIQGKFS 669
Query: 653 PCAGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHV--------TRPPAGVIFP 702
P + SPV + D+ N V+ +K P A ++ R PA V+ P
Sbjct: 670 LDEEAILPDQIVCSPVPMLRDLTQNTVVSINFKDPQFAEDYIFKAVMLPGARKPAAVLKP 729
>gi|197100138|ref|NP_001126942.1| 5'-3' exoribonuclease 2 [Pongo abelii]
gi|75040978|sp|Q5R4L5.1|XRN2_PONAB RecName: Full=5'-3' exoribonuclease 2
gi|55733236|emb|CAH93301.1| hypothetical protein [Pongo abelii]
Length = 950
Score = 539 bits (1389), Expect = e-150, Method: Compositional matrix adjust.
Identities = 314/719 (43%), Positives = 420/719 (58%), Gaps = 63/719 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 111 MNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 171 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K + DE
Sbjct: 231 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLLREKKVKHDE 289
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 290 LADSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIRE AI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 350 LPSLEIRENAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKD 409
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSE 355
R K ++ + +R +P P ++ GS++AS P + Y+
Sbjct: 410 DEDSFRRRQKEKRKRMKRD---QPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYEM-- 464
Query: 356 CVGRLDNGKGTSGRPH-KVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRD 414
R+ N S P+ S + IG +AE+S
Sbjct: 465 ---RMQNNSSPSISPNTSFTSDGSPSPIGGIKRKAEDS---------------------- 499
Query: 415 KSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 474
+S+ ED V+L E GWK+RYY+ KF+A +E+ R+ VV Y EGLCWV+ Y
Sbjct: 500 -----DSEPEPEDNVRLWEAGWKQRYYKNKFDADAADEK--FRRKVVQSYVEGLCWVLRY 552
Query: 475 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPE 533
YY+G SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP
Sbjct: 553 YYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPP 612
Query: 534 HYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEE 593
+RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT E
Sbjct: 613 SWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPE 672
Query: 594 EARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISP 653
E RRNS+ D+LFV HPL I L Q E V+V PEL G+ G S
Sbjct: 673 ETRRNSLGGDVLFVGKHHPLHDFILEL----YQTGSTEPVDVP----PELCHGIQGKFSL 724
Query: 654 CAGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHV--------TRPPAGVIFP 702
P + SPV + D+ N V+ +K P A ++ R PA V+ P
Sbjct: 725 DEEAILPDQIVCSPVPMLRDLTQNTVVSINFKDPQFAEDYIFKAVMLPGARKPAAVLKP 783
>gi|431894120|gb|ELK03920.1| 5'-3' exoribonuclease 2 [Pteropus alecto]
Length = 1091
Score = 539 bits (1388), Expect = e-150, Method: Compositional matrix adjust.
Identities = 319/737 (43%), Positives = 427/737 (57%), Gaps = 66/737 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 252 MNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNL 311
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 312 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 371
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 372 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDE 430
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 431 LADSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPH 490
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIREGAI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 491 LPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKD 550
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSE 355
R K ++ + +R +P P ++ GS++AS P + Y+
Sbjct: 551 DEDSFRRRQKEKRKRMKRD---QPAFTPGGILTPHALGSRNSPGSQVASNPRQAAYEM-- 605
Query: 356 CVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDK 415
R+ N S P+ SF +D + L + R
Sbjct: 606 ---RMQNNSSPSVSPN-------------------TSFTSDGS------PSPLGGIKRKA 637
Query: 416 SDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYY 475
D+ + P ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YY
Sbjct: 638 EDSDSEPEP-EDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYY 694
Query: 476 YEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEH 534
Y+G SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP
Sbjct: 695 YQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPS 754
Query: 535 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 594
+RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE
Sbjct: 755 WRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEE 814
Query: 595 ARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPC 654
RRNS+ D+LFV H L I L Q E ++V PEL G+ G S
Sbjct: 815 TRRNSLGGDVLFVGKHHLLHDFILQL----YQTGSTEPMDVP----PELCHGIQGKFSLD 866
Query: 655 AGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHVTRPPAGVIFPKKIVQLEDLK 712
P + SPV + D+ N + +K P A +V + V+ P K
Sbjct: 867 EEAILPDQIVCSPVPMLRDLTQNVAISINFKDPQFAEDYVFK---AVMLPGA------RK 917
Query: 713 PAPVL----WHEDSGRR 725
PAPVL W + S R
Sbjct: 918 PAPVLKPSDWEKSSNGR 934
>gi|348581480|ref|XP_003476505.1| PREDICTED: 5'-3' exoribonuclease 2-like [Cavia porcellus]
Length = 950
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 314/718 (43%), Positives = 419/718 (58%), Gaps = 61/718 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 111 MNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGYLPPEEIKERFDSNCITPGTEFMDNL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 171 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 231 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDE 289
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 290 LADSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIREGAI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 350 LPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKD 409
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSE 355
R K ++ + +R +P P ++ GS++AS P + Y+
Sbjct: 410 DEDSFRRRQKEKRKRMKRD---QPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYEM-- 464
Query: 356 CVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDK 415
R+ S P+ SF +D + L + R
Sbjct: 465 ---RMQTNSSPSVSPN-------------------TSFTSDGS------PSPLGGIKRKA 496
Query: 416 SDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYY 475
D+ + P ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YY
Sbjct: 497 EDSDSEPEP-EDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYY 553
Query: 476 YEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEH 534
Y+G SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP
Sbjct: 554 YQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPS 613
Query: 535 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 594
+RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE
Sbjct: 614 WRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEE 673
Query: 595 ARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPC 654
RRNS+ D+LFV HPL I L + E V+V PEL G+ G S
Sbjct: 674 NRRNSLGGDVLFVGKHHPLHDFISEL----YRTGSTEPVDVP----PELCHGIQGKFSLD 725
Query: 655 AGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHV--------TRPPAGVIFP 702
P V SPV + D+ N + +K P A +V R PA V+ P
Sbjct: 726 EEAILPDQVVCSPVPMLRDLAQNTAISINFKDPQFAEDYVFKAILLPGARKPAAVLKP 783
>gi|117606214|ref|NP_036047.2| 5'-3' exoribonuclease 2 [Mus musculus]
gi|30173483|sp|Q9DBR1.1|XRN2_MOUSE RecName: Full=5'-3' exoribonuclease 2; AltName: Full=Protein Dhm1
gi|12836253|dbj|BAB23573.1| unnamed protein product [Mus musculus]
gi|26343603|dbj|BAC35458.1| unnamed protein product [Mus musculus]
gi|32451718|gb|AAH54743.1| 5'-3' exoribonuclease 2 [Mus musculus]
gi|74188828|dbj|BAE39193.1| unnamed protein product [Mus musculus]
gi|148696571|gb|EDL28518.1| 5'-3' exoribonuclease 2, isoform CRA_f [Mus musculus]
Length = 951
Score = 537 bits (1383), Expect = e-149, Method: Compositional matrix adjust.
Identities = 313/718 (43%), Positives = 418/718 (58%), Gaps = 61/718 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 111 MNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 171 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 231 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCALCNQFGHEVKDCEGLPREKKGKHDE 289
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 290 LADSLPCAEGEFIFLRLNVLREYLERELTMASLPFPFDVERSIDDWVFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIREGAI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 350 LPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKD 409
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSE 355
R K ++ + +R +P P ++ G ++AS P + Y+
Sbjct: 410 DEDSFRRRQKEKRKRMKRD---QPAFTPSGILTPHALGSRNSPGCQVASNPRQAAYEM-- 464
Query: 356 CVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDK 415
R+ S P+ SF +D + L + R
Sbjct: 465 ---RMQRNSSPSISPN-------------------TSFASDGS------PSPLGGIKRKA 496
Query: 416 SDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYY 475
D+ + P ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YY
Sbjct: 497 EDSDSEPEP-EDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYY 553
Query: 476 YEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEH 534
Y+G SW+W+YP+HYAPFASD + + + FE G PFKP QL+GVFP+AS + LP
Sbjct: 554 YQGCASWKWYYPFHYAPFASDFEGIADMSSEFEKGTKPFKPLEQLMGVFPAASGNFLPPT 613
Query: 535 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 594
+RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE
Sbjct: 614 WRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEE 673
Query: 595 ARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPC 654
RRNS+ D+LFV HPL I L Q E V+V PEL G+ G S
Sbjct: 674 NRRNSLGGDVLFVGKLHPLRDFILEL----YQTGSTEPVDVP----PELCHGIQGTFSLD 725
Query: 655 AGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHV--------TRPPAGVIFP 702
P SPV + D+ N + +K P A +V R PA V+ P
Sbjct: 726 EEAILPDQTVCSPVPMLRDLTQNTAVSINFKDPQFAEDYVFKAAMLPGARKPATVLKP 783
>gi|340375702|ref|XP_003386373.1| PREDICTED: 5'-3' exoribonuclease 2-like [Amphimedon queenslandica]
Length = 1066
Score = 536 bits (1382), Expect = e-149, Method: Compositional matrix adjust.
Identities = 301/713 (42%), Positives = 416/713 (58%), Gaps = 38/713 (5%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAV 59
MNQQRSRRFR++K++ D E +++RQE G LPP K DS FDSN ITPGT+FMA
Sbjct: 111 MNQQRSRRFRSAKESVDKLEEIKKVRQELAERGVGLPPLKPDSAHFDSNCITPGTQFMAN 170
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
L+I LQYYIH R+N++P W+ +KVILSDANVPGEGEHKIM Y+R QR G+DPNT HCL
Sbjct: 171 LAICLQYYIHDRMNHNPAWKGLKVILSDANVPGEGEHKIMDYIRKQRASVGHDPNTHHCL 230
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
YG DADLIML LATHE +F+ILRE F P Q C +C Q GH C G+A+ K GEFD
Sbjct: 231 YGADADLIMLGLATHEPYFTILRE-DFKPNQPRPCEICNQYGHSMTECTGEAREKKGEFD 289
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
E + +K + F+ I LREYL E RI F+ D E +DD++FMCFFVGNDFLP
Sbjct: 290 ELATANIAMEKEFIFIRINVLREYLQRELRIDGLDFKFDFERAIDDWVFMCFFVGNDFLP 349
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+L+IREGAI+ L+ +YKK + YLT+ ++ V+ + +G ED IF +R
Sbjct: 350 HLPSLQIREGAIDRLINLYKKFLPSTKSYLTENGFVDVKNVQLILFELGKVEDEIFIRRR 409
Query: 300 RLHQRHAERIKREKAQARRGDDVE-PLAQPDSLVPV-----------SRFHGSRLASGPS 347
R+ E R+K + RR +D + P P+ L PV +R + GP+
Sbjct: 410 DQDIRNKE---RQKFKRRRIEDYKAPQFIPEQLAPVPIGSAPSPAVNARHDAYLMRQGPA 466
Query: 348 PSPYQQSECVGRLDNGKGTSGRPHKVPRLS-----SGATIGAAIVEAENSFETDPQENKE 402
PS L + K + + + S +G++ S ++ + +
Sbjct: 467 PSAGAGGVSGSSLTSNKEAAKSMKSLLKKSKSFDDTGSSASQEGGGVRRSLTSEEERPRN 526
Query: 403 EFKAKLKELLRDKSDAFN---SDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKD 459
K + R S EED+V+L E GWKERYY+ KF + + + +
Sbjct: 527 TLKRSFSDARRANSGGRGHGEDSGSEEDEVRLWEDGWKERYYQSKFCVSSND--IDFVRQ 584
Query: 460 VVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQ 518
VV Y+EGLCWVM YYY+G SW+W+YP+HYAPFASD + + FE G PF+P Q
Sbjct: 585 VVESYSEGLCWVMSYYYQGCPSWKWYYPFHYAPFASDFRYIRDVRDRFETGSKPFRPLEQ 644
Query: 519 LLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEAR 578
L+ VFP+AS+ LP ++ LM D +S I DFYPT+F++D+NGK+++WQG+A LPF+DE R
Sbjct: 645 LMSVFPAASAKFLPPSWQTLMLDDDSSIIDFYPTNFKIDLNGKKFAWQGVALLPFVDECR 704
Query: 579 LLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKER 638
L + ++ + H L E RNS+ D++FV H LS +Y + E+V +
Sbjct: 705 LHEALEPLYHMLDPLETVRNSLGNDLIFV---HKLS-KLYAFARTLYEETPGEKVGLVS- 759
Query: 639 LNPELSDGMNGYISPCAG-----DPHPPVFRSPVASMEDIMGNQVLCAIYKLP 686
+NP+ S G++G + P + SP+ +E I Q +C Y+ P
Sbjct: 760 INPDSSGGVSGSVWPNNNMADILKKKECLVESPLPQLETITPTQAICLNYQDP 812
>gi|148696569|gb|EDL28516.1| 5'-3' exoribonuclease 2, isoform CRA_d [Mus musculus]
Length = 1002
Score = 536 bits (1381), Expect = e-149, Method: Compositional matrix adjust.
Identities = 313/718 (43%), Positives = 418/718 (58%), Gaps = 61/718 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 130 MNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNL 189
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 190 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 249
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 250 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCALCNQFGHEVKDCEGLPREKKGKHDE 308
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 309 LADSLPCAEGEFIFLRLNVLREYLERELTMASLPFPFDVERSIDDWVFMCFFVGNDFLPH 368
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIREGAI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 369 LPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKD 428
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSE 355
R K ++ + +R +P P ++ G ++AS P + Y+
Sbjct: 429 DEDSFRRRQKEKRKRMKRD---QPAFTPSGILTPHALGSRNSPGCQVASNPRQAAYEM-- 483
Query: 356 CVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDK 415
R+ S P+ SF +D + L + R
Sbjct: 484 ---RMQRNSSPSISPN-------------------TSFASDGS------PSPLGGIKRKA 515
Query: 416 SDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYY 475
D+ + P ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YY
Sbjct: 516 EDSDSEPEP-EDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYY 572
Query: 476 YEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEH 534
Y+G SW+W+YP+HYAPFASD + + + FE G PFKP QL+GVFP+AS + LP
Sbjct: 573 YQGCASWKWYYPFHYAPFASDFEGIADMSSEFEKGTKPFKPLEQLMGVFPAASGNFLPPT 632
Query: 535 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 594
+RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE
Sbjct: 633 WRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEE 692
Query: 595 ARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPC 654
RRNS+ D+LFV HPL I L Q E V+V PEL G+ G S
Sbjct: 693 NRRNSLGGDVLFVGKLHPLRDFILEL----YQTGSTEPVDVP----PELCHGIQGTFSLD 744
Query: 655 AGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHV--------TRPPAGVIFP 702
P SPV + D+ N + +K P A +V R PA V+ P
Sbjct: 745 EEAILPDQTVCSPVPMLRDLTQNTAVSINFKDPQFAEDYVFKAAMLPGARKPATVLKP 802
>gi|74207538|dbj|BAE40020.1| unnamed protein product [Mus musculus]
Length = 951
Score = 536 bits (1381), Expect = e-149, Method: Compositional matrix adjust.
Identities = 313/718 (43%), Positives = 417/718 (58%), Gaps = 61/718 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 111 MNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 171 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 231 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCALCNQFGHEVKDCEGLPREKKGKHDE 289
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + FL LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 290 LADSLPCAEGEFIFLRPNVLREYLERELTMASLPFPFDVERSIDDWVFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIREGAI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 350 LPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKD 409
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVP-----VSRFHGSRLASGPSPSPYQQSE 355
R K ++ + +R +P P ++ G ++AS P + Y+
Sbjct: 410 DEDSFRRRQKEKRKRMKRD---QPAFTPSGILTHHALGSRNSQGCQVASNPRQAAYEM-- 464
Query: 356 CVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDK 415
R+ S P+ SF +D + L + R
Sbjct: 465 ---RMQRNSSPSISPN-------------------TSFASDGS------PSPLGGIKRKA 496
Query: 416 SDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYY 475
D+ + P ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YY
Sbjct: 497 EDSDSEPEP-EDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYY 553
Query: 476 YEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEH 534
Y+G SW+W+YP+HYAPFASD + + + FE G PFKP QL+GVFP+AS + LP
Sbjct: 554 YQGCASWKWYYPFHYAPFASDFEGIADMSSEFEKGTKPFKPLEQLMGVFPAASGNFLPPT 613
Query: 535 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 594
+RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE
Sbjct: 614 WRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEE 673
Query: 595 ARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPC 654
RRNS+ D+LFV HPL I L Q E V+V PEL G+ G S
Sbjct: 674 NRRNSLGGDVLFVGKLHPLRDFILEL----YQTGSTEPVDVP----PELCHGIQGTFSLD 725
Query: 655 AGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHV--------TRPPAGVIFP 702
P SPV + D+ N + +K P A +V R PA V+ P
Sbjct: 726 EEAILPDQTVCSPVPMLRDLTQNTAVSINFKDPQFAEDYVFKAAMLPGARKPATVLKP 783
>gi|387015832|gb|AFJ50035.1| 5'-3' exoribonuclease 2-like [Crotalus adamanteus]
Length = 945
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 311/720 (43%), Positives = 430/720 (59%), Gaps = 51/720 (7%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ +S E++R+RQE +G LPP+ + FDSN ITPGTEFM L
Sbjct: 111 MNQQRSRRFRASKEGMESVEEKQRIRQEIMEKGGFLPPEEIKERFDSNCITPGTEFMDNL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 171 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +C+G K K GE D+
Sbjct: 231 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHETKDCQGLPKEKQGEHDQ 289
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D ++ + F+ + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 290 FADCPPGMEQEFIFIRLCVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIREGAI+ L+ +YK GGYLT+ +L RV+ + AVG ED IF+KR +
Sbjct: 350 LPSLEIREGAIDRLVNIYKNVVHKTGGYLTENGYVNLERVQMIMLAVGEVEDSIFKKR-K 408
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRL 360
+ + +R ++EK + + + L + P+ R G+R + P +P + + R+
Sbjct: 409 DDEENFKRRQKEKRKRMKREQHTMLGGQYTPQPLGR--GNRSSHQPISNP-RHTAYEMRM 465
Query: 361 DNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFN 420
+ + T+ V A +SF +D + ++ K++ +
Sbjct: 466 QDRQNTT-----------------PSVSANSSFTSDG-------TSSTTGGIKRKTEDSD 501
Query: 421 SDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVC 480
S+ ED V+L E GWK+RYY+ KF+ +++ R+ VV Y EGLCWV+ YYY+G
Sbjct: 502 SEPEPEDNVRLWEAGWKQRYYKNKFDVDVNDKK--FRRKVVQSYVEGLCWVLRYYYQGCA 559
Query: 481 SWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLM 539
SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP +RKLM
Sbjct: 560 SWKWYYPFHYAPFASDFEGIADLVSDFEKGTKPFKPLEQLMGVFPAASGNFLPLTWRKLM 619
Query: 540 TDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 599
+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL + ++ LT EE RRNS
Sbjct: 620 SDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALAQVYPNLTSEEMRRNS 679
Query: 600 IMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPH 659
+ D+LFV H L I +Q K E+ V + PEL G+ G I+ +P
Sbjct: 680 LGGDVLFVGKHHQLHDFI------LEQYKSNEKEPVD--IAPELCHGIQGKIT-LDENPI 730
Query: 660 PP--VFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKPAPVL 717
P +SPV + D+ N + ++ P + IF K +V KPA VL
Sbjct: 731 LPDKAVQSPVPLLRDLTQNSAISVNFQDPQYQED-------YIF-KAVVLSGAKKPAAVL 782
>gi|116204849|ref|XP_001228235.1| hypothetical protein CHGG_10308 [Chaetomium globosum CBS 148.51]
gi|115311955|sp|Q2GNZ6.3|XRN2_CHAGB RecName: Full=5'-3' exoribonuclease 2
gi|88176436|gb|EAQ83904.1| hypothetical protein CHGG_10308 [Chaetomium globosum CBS 148.51]
Length = 1039
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 312/758 (41%), Positives = 429/758 (56%), Gaps = 69/758 (9%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFERE----GRKLPPKSD-SQVFDSNVITPGTE 55
MNQQRSRRFRA++DA + ++++L + ++E ++ P ++ + FDSN ITPGT
Sbjct: 113 MNQQRSRRFRAAQDAKEKEEDKQQLLKMLQKEKGSTAKEEPIETVVKKAFDSNSITPGTP 172
Query: 56 FMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNT 115
FM +L+ +L+Y+ +LN DP W K+KVI+SDA VPGEGEHKIM +VR QRN P +DPNT
Sbjct: 173 FMDILAASLRYWCAYKLNTDPAWAKMKVIISDATVPGEGEHKIMEFVRSQRNSPEHDPNT 232
Query: 116 RHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRK 174
RH +YGLDADLIML LATHE HF +LRE V F G+ C LCGQ GH NC G+AK K
Sbjct: 233 RHVIYGLDADLIMLGLATHEPHFRVLREDVFFQQGKARMCKLCGQKGHDERNCRGEAKEK 292
Query: 175 AGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVG 234
AGEFDEK + P KP+ +LH+ LREYL E IPN PF DLE +DD++FMCFFVG
Sbjct: 293 AGEFDEK--DKAEPLKPFIWLHVSILREYLAIELNIPNLPFRWDLERAIDDWVFMCFFVG 350
Query: 235 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI 294
NDFLPH+P LEIRE I LMA++K +GGY+T L R ++ + + ED I
Sbjct: 351 NDFLPHLPALEIRENGIETLMAIWKDNLPVMGGYVTKDGHVDLDRAQYILSGLAKQEDSI 410
Query: 295 FQKRARLHQRHAERIKREKAQARRGDDV-----EPLA-------QPDSLVPVSRFHGSRL 342
F++R R KR K ++G++ PL+ P++ P + +
Sbjct: 411 FRRRKETEDRREAGFKRRKLNNQQGNNRGGAHDSPLSGRGGRKGAPEANGPPVGMNLFPV 470
Query: 343 ASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETD-PQENK 401
AS P P V R + ++ K + I + + + + E D P+E
Sbjct: 471 ASIPKPV-ITHDMVVNRANVANKSAASVLK-------SQIQSLVAQTQEKPEGDEPKEEN 522
Query: 402 EEFKA------KLKELLRDKSDAFNSDNPEE--------------DKVKLGEPGWKERYY 441
E K K K L ++ A SD + D V+L E G+ +RYY
Sbjct: 523 PEAKTPPSALGKRKAELIEEGTATASDAASDTETPATTSSEEGPIDTVRLWEEGYADRYY 582
Query: 442 EEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLD 501
E+KF K + R V Y EGL WV+ YY++G SW+WFYPYHYAPFA+D DL
Sbjct: 583 EQKF--KVDAKDIAFRHKVARAYVEGLAWVLMYYFQGCPSWEWFYPYHYAPFAADFVDLG 640
Query: 502 QFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGK 561
+ ISFE G +PF QL+ V P+AS HA+PE + LMT +SPI DFYP DFE+D+NGK
Sbjct: 641 KMKISFEKGRISRPFEQLMSVLPAASRHAIPEVFHDLMTQEDSPILDFYPEDFEIDLNGK 700
Query: 562 RYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHP-----LSAS 616
+ SWQGIA LPFI+ RLLD +K H L+ E+ RN+ D+L + SHP +S+
Sbjct: 701 KMSWQGIALLPFIEMPRLLDAMKTKSHLLSAEDKARNAPGHDVLLISDSHPGLYEDISSH 760
Query: 617 IYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAG-DPHPP-VFRSPVASMEDIM 674
Y+ + + K L+P+ SDG++G + G PH V+ +M D+
Sbjct: 761 FYSKKQAVPEFK----------LDPKRSDGLSGKVRKIEGYVPHGSLVYPLERNTMPDVD 810
Query: 675 GNQVLCAIYKLP-DAHKHVTRPPAGVIFPKKIVQLEDL 711
++ + Y +P +H H + G+ P + D+
Sbjct: 811 YDRSMSVNYDMPTSSHIHKSMLLRGLKMPTPALDRSDV 848
>gi|326914793|ref|XP_003203707.1| PREDICTED: 5'-3' exoribonuclease 2-like [Meleagris gallopavo]
Length = 985
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 327/798 (40%), Positives = 446/798 (55%), Gaps = 62/798 (7%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++++RQE +G LPP+ + FDSN ITPGTEFM L
Sbjct: 112 MNQQRSRRFRASKEGMEAAEEKQKIRQEILAKGGILPPEEVKERFDSNCITPGTEFMDNL 171
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLN+DPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 172 AKCLRYYIADRLNSDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 231
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +C+G + K G+ D+
Sbjct: 232 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCALCNQMGHEVKDCQGLPREKQGKHDQ 290
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + ++ + F+ + LREYL+ E + + PF D E VDD++FMCFFVGNDFLPH
Sbjct: 291 FADSLPASEQEFIFIRLCVLREYLERELTMASLPFTFDFERSVDDWVFMCFFVGNDFLPH 350
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIREGAI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 351 LPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGFVNLQRVQMIMLAVGEVEDSIFKKRKD 410
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRL 360
R K +K + +R S +P +F L + SP
Sbjct: 411 DDDNFKRRQKEKKKRMKRDH--------PSFIPGGQFSPQALGNRSSPQAISN------- 455
Query: 361 DNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQE--NKEEFKAKLKELLRDKSDA 418
PR A + + +NS + P N + + + + R D+
Sbjct: 456 -------------PR---QAAFEMRMHDRQNSTMSSPNTSLNSDGSPSPARGIKRKSEDS 499
Query: 419 FNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEG 478
+ P ED ++L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YYY+G
Sbjct: 500 DSEPEP-EDNIRLWESGWKQRYYKNKFDVDASDEK--FRRKVVQSYVEGLCWVLRYYYQG 556
Query: 479 VCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRK 537
SW W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP +RK
Sbjct: 557 CASWNWYYPFHYAPFASDFEGIADMPSDFEKGSKPFKPLEQLMGVFPAASGNFLPPTWRK 616
Query: 538 LMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARR 597
LMTDP S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE RR
Sbjct: 617 LMTDPESSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEENRR 676
Query: 598 NSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGD 657
NS+ D+LFV HPL I +Q K K V + PEL G+ G ++
Sbjct: 677 NSLGGDVLFVGKHHPLCDFI------VEQYKSKNTEPVD--MPPELCYGIQGKLTLNENA 728
Query: 658 PHP-PVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKPAPV 716
P SPV + D+ N + +K P + IF K V KP PV
Sbjct: 729 VLPDKTVESPVPMLRDLTQNSAVSISFKDPQFDED-------FIF-KATVLPGAKKPPPV 780
Query: 717 LWHEDSGRRPHENGRHNPH-GTISGRQ---LGEAAHRLVANSLQHMKVDRNGYGDRMHGS 772
L D + ++ P G R+ L ++A R + ++ M +R G +
Sbjct: 781 LKPGDWEKTNNDGRPWRPQLGFNRDRKPVHLDQSAFRTLGHA---MPRERGMPGMYANAV 837
Query: 773 PLPYAAAPYVPPVPSYQE 790
PL +PY P+ S Q+
Sbjct: 838 PLGAYGSPYTRPLMSGQQ 855
>gi|410916005|ref|XP_003971477.1| PREDICTED: 5'-3' exoribonuclease 2-like [Takifugu rubripes]
Length = 992
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 312/764 (40%), Positives = 434/764 (56%), Gaps = 48/764 (6%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ A+ +++R+R+E + G LPP+ + FDSN ITPGTEFM L
Sbjct: 111 MNQQRSRRFRASKEGAELVEDKKRIREEVIQRGGYLPPEEIKERFDSNCITPGTEFMDNL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNN+PGW + V LSDA+VPGEGEHKIM ++R QR P +DPNT HCL
Sbjct: 171 AKCLRYYIADRLNNNPGWRNVTVFLSDASVPGEGEHKIMDFIRRQRAQPNHDPNTHHCLC 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LCGQ GH +C+G A+ K GE DE
Sbjct: 231 GADADLIMLGLATHEPNFTIIRE-EFKPNKPRPCALCGQLGHDIKDCQGTAREKQGEHDE 289
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + V ++ + F+ + LREYL E + + PF D E VDD++FMCFFVGNDFLPH
Sbjct: 290 FADSMPVSEQEFIFIRLCVLREYLARELTMASLPFPFDFERSVDDWVFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIREGAI+ L+ +YK GGYLT+ L RVE +QAVG ED IF+KR
Sbjct: 350 LPSLEIREGAIDRLVGIYKDVVHKTGGYLTENGYVKLERVELIMQAVGVAEDNIFKKRKE 409
Query: 301 LHQ---RHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECV 357
+ R K+ +RG + + +F L P Q +
Sbjct: 410 DDEGFKRRMREKKKRMKMEQRG---------PAYLTTGQFTPHALGGRNQPEAVQNARHQ 460
Query: 358 GRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSD 417
+ K + R +K + ++ AA+ N + +N E + + K++
Sbjct: 461 A-YEMRKQSMERNNK----DAAQSLKAAMRNGGNVSSSACPDNSTESRGA-----KRKAE 510
Query: 418 AFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYE 477
+S+ ED V+L E GWK+RYY+ KF+ + E+ RK VV Y EGLCWV+ YYY+
Sbjct: 511 DSDSEPEPEDNVRLWEEGWKQRYYKNKFDVDVMD--EDFRKKVVQSYVEGLCWVLRYYYQ 568
Query: 478 GVCSWQWFYPYHYAPFASDLKDLDQFNISFEL-GHPFKPFNQLLGVFPSASSHALPEHYR 536
G SW+W++P+HYAPFASD KD+ FE PF+P QL+ VFP+AS + LPE +R
Sbjct: 569 GCASWKWYFPFHYAPFASDFKDIKGMFTDFEKDTKPFQPLEQLMSVFPAASGNFLPETWR 628
Query: 537 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 596
LM+ P+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL + + LT EE +
Sbjct: 629 NLMSSPDSSIIDFYPDDFAIDLNGKKYAWQGVALLPFVDERRLRAALADVYPDLTPEEVK 688
Query: 597 RNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAG 656
RNS+ +D +F+ +HPL Y + + + E E+ +L G+ G ++
Sbjct: 689 RNSLGSDFIFLGKAHPL----YDFIQELYRTEATEGTEIPA----DLCHGIQGTLN-LDD 739
Query: 657 DPHPP--VFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKPA 714
DP P SP+ ++ DI N + + P P G +F ++ + P
Sbjct: 740 DPILPDKAVMSPIPTLRDITQNNSVGVKFLDPQY-------PDGFVFKATLLPRAKI-PT 791
Query: 715 PVLWHEDSGRRPHENGRHNPHGTISGRQ---LGEAAHRLVANSL 755
VL ED R H G RQ L +++ R + ++L
Sbjct: 792 NVLKPEDFERGGHRGSWRPQLGFNPNRQQAHLDQSSFRALGHNL 835
>gi|291242576|ref|XP_002741181.1| PREDICTED: 5-3 exoribonuclease 2-like [Saccoglossus kowalevskii]
Length = 965
Score = 533 bits (1374), Expect = e-148, Method: Compositional matrix adjust.
Identities = 317/772 (41%), Positives = 439/772 (56%), Gaps = 63/772 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAV 59
MNQQRSRRFR K+ + E +++++E G LPP K S+ FDSN ITPGTEFM
Sbjct: 111 MNQQRSRRFRGPKEVREKQVEIDKVKEEILSRGGTLPPPKPVSEKFDSNCITPGTEFMFR 170
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
L+ L+YY+ R+ DPGW K+KVILSDANVPGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 171 LADCLRYYVTERIMTDPGWSKVKVILSDANVPGEGEHKIMDYIRKQRGSPDHDPNTHHCL 230
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
G DADLIML LATHE +F+I+RE F P C LCGQ GH C G AK K GEFD
Sbjct: 231 CGADADLIMLGLATHEPYFTIIRE-EFKPNAPRACELCGQYGHEMKECTGAAKEKEGEFD 289
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
E + V ++ + FL + LREYL+ E + PF D E +DD++FMCFFVGNDFLP
Sbjct: 290 EL-TKPFVQEQEFIFLRLNILREYLEKELFMTGLPFTFDFERAIDDWVFMCFFVGNDFLP 348
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR- 298
H+P+L+IREGAI+ L+ +YK GGYLT +L RV+ + +G ED IF+KR
Sbjct: 349 HLPSLQIREGAIDRLIRIYKTAVFKTGGYLTKDGVVNLERVQMMMTDLGEMEDGIFKKRR 408
Query: 299 ---ARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSP--SPYQQ 353
R ER KR K + S VP ++ ++S PS +P Q+
Sbjct: 409 SDDVRFRNIQKERKKRNKRNS-----------APSFVPAGQYAPQPVSSSPSAISNPRQE 457
Query: 354 SECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLR 413
+ + K ++G SS A ++A + +T + + + +E
Sbjct: 458 AYQMRMGTGPKSSTG--------SSAVGQDLANLDAAKALKTMLGSDSQPGSKRKREDEE 509
Query: 414 DKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMH 473
++ D +D ++L E GWK+RYY+ KF+ E E+ + VV Y EGLCWV+
Sbjct: 510 EEDDE------PKDDIRLWEDGWKDRYYKLKFDVS--ENDEQFVQSVVSSYVEGLCWVLR 561
Query: 474 YYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALP 532
YYY+G SW+W++P+HYAPFA++ D+ + FE G PFKP QL+GVFPSAS LP
Sbjct: 562 YYYQGCPSWKWYFPFHYAPFAANFIDIGKLPNDFEKGTKPFKPLEQLMGVFPSASGQFLP 621
Query: 533 EHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTE 592
E +RKLM+DP+SPI DFYP DF +D+NGKRY+WQG+A LPF+DE RL + + + LT
Sbjct: 622 ETWRKLMSDPDSPIIDFYPDDFAIDLNGKRYAWQGVALLPFVDEKRLKEALVGVYSDLTP 681
Query: 593 EEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYIS 652
EE RN + +D LFV HP + K+L +NP+L++GM+G I
Sbjct: 682 EEIHRNGLGSDRLFVGKKHPAY-------DFFKELYDGGDFSEPVDMNPKLTEGMSGTIW 734
Query: 653 P----CA-GDPHPPVFRSPVASMEDIMGNQVLCAIYK---LPDAHKHVTRPPAGVIFPKK 704
C G+P +SP+ +ED+ +VL ++ P+ H + G P++
Sbjct: 735 ADEFVCMPGEPR----KSPLPMLEDLRNTEVLSVSFRDPQYPEDHVFSAKLLPGAKLPER 790
Query: 705 IVQLEDLKPAPVLWHEDSGRRPHENGRHNPHGTISGRQLGEAAHRLVANSLQ 756
+++ ED + ++ RP R + S L HR+V +S++
Sbjct: 791 VLKPEDFNNR----NPNTSYRPQVGFRRRSGPSAS---LDAGGHRMVRHSMR 835
>gi|119186689|ref|XP_001243951.1| hypothetical protein CIMG_03392 [Coccidioides immitis RS]
Length = 1031
Score = 533 bits (1374), Expect = e-148, Method: Compositional matrix adjust.
Identities = 307/768 (39%), Positives = 433/768 (56%), Gaps = 82/768 (10%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGR-----KLPPKSDSQVFDSNVITPGTE 55
MNQQRSRRFR++++A ++ ++ + ++ R ++ + + +DSNVITPGT
Sbjct: 126 MNQQRSRRFRSAQEAKEADEKKAEFAKLLRQQNRGKGDMEIAEEVVQKTWDSNVITPGTP 185
Query: 56 FMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNT 115
FM +LS AL+Y++ +LN DP WEK+K+I+SDA VPGEGEHKIM ++R QR+ P +D NT
Sbjct: 186 FMDILSAALRYWVAYKLNTDPAWEKVKIIISDATVPGEGEHKIMEFIRSQRSCPEHDANT 245
Query: 116 RHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRK 174
RH +YGLDADLIML LATHE HF +LRE V F + C LCGQ GH+A C GKAK K
Sbjct: 246 RHVIYGLDADLIMLGLATHEPHFRVLREDVFFQESKARTCHLCGQQGHVAEACTGKAKEK 305
Query: 175 AGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVG 234
GEFDEK + P KP+ +LH+ LREYL E +PN PF DLE +DD++FMCFFVG
Sbjct: 306 NGEFDEK--QRGTPLKPFIWLHVSVLREYLAAEMYVPNQPFPFDLERALDDWVFMCFFVG 363
Query: 235 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI 294
NDFLPH+P+LEIRE I+ L+A+++ +GGYLT L+R + +Q + ED I
Sbjct: 364 NDFLPHLPSLEIRENGIDTLIAIWRDNIPLMGGYLTQDGNVDLKRAQLILQGLAKQEDAI 423
Query: 295 FQK-------------------------RARLHQRHAERIKREKAQARRGDDVEPLAQPD 329
F++ AR RH+ + RRG D++ +A +
Sbjct: 424 FRRRRQTEERRNANAKRRKEQERQREEENARKRPRHSLENEPAGPSPRRGKDMDGIAPAN 483
Query: 330 SLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEA 389
+P+ F S+ + + V R K L S GA+ +
Sbjct: 484 --MPL--FIPSKGELPRAERELTHAMVVNRGAIYKANMANKSAAAALKSQLISGASEMSV 539
Query: 390 ENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEE----------------DKVKLGE 433
E S T + L + K+DA +DN E D V+L E
Sbjct: 540 EVSTSTSAND------VSPSALGKRKADALETDNTTEQEDSERPPQEQDELPADSVRLWE 593
Query: 434 PGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPF 493
G+ +RYYE+KF+ + E R V Y EGLCWV+ YY++G SW W+YPYHYAPF
Sbjct: 594 QGYADRYYEQKFHVDPKDI--EFRHKVARAYVEGLCWVLLYYFQGCPSWTWYYPYHYAPF 651
Query: 494 ASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTD 553
A+D DL+ +I F G PF+PF QL+GV P+AS+HA+PE +R LM++P S I DFYP +
Sbjct: 652 AADFVDLEHMDIQFHKGAPFRPFEQLMGVLPAASNHAIPEIFRDLMSNPESEIIDFYPEE 711
Query: 554 FEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPL 613
F +D+NGK+++WQG+A LPFIDE+RLL+ + K L+EEE RN + D+LF+ HPL
Sbjct: 712 FPIDLNGKKFAWQGVALLPFIDESRLLEAMAKRYPRLSEEEKARNEMGRDILFISDRHPL 771
Query: 614 SASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYIS-PCAGDPHPPVFRSPVASMED 672
E K++ K +LN +S+G+ G + A PH S VAS++
Sbjct: 772 ------YKELVANFYSKKQTVPKFKLNMRVSEGLGGKVERDEAYIPH----SSLVASIDG 821
Query: 673 IM-----GNQVLCAIYKLPDA---HKHVTRPPAGVIFPKKIVQLEDLK 712
I ++ + +Y +P + HK + P GV F ++ D++
Sbjct: 822 IELPALDEDRSISVLYDIPKSMYTHKSMLLP--GVKFNPPVLDKTDIE 867
>gi|26327149|dbj|BAC27318.1| unnamed protein product [Mus musculus]
Length = 952
Score = 533 bits (1374), Expect = e-148, Method: Compositional matrix adjust.
Identities = 314/719 (43%), Positives = 419/719 (58%), Gaps = 63/719 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 111 MNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 171 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 231 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCALCNQFGHEVKDCEGLPREKKGKHDE 289
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 290 LADSLPCAEGEFIFLRLNVLREYLERELTMASLPFPFDVERSIDDWVFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIREGAI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 350 LPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKD 409
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSE 355
R K ++ + +R +P P ++ G ++AS P + Y+
Sbjct: 410 DEDSFRRRQKEKRKRMKRD---QPAFTPSGILTPHALGSRNSPGCQVASNPRQAAYEM-- 464
Query: 356 CVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDK 415
R+ S P+ SF +D + L + R
Sbjct: 465 ---RMQRNSSPSISPN-------------------TSFASDGS------PSPLGGIKRKA 496
Query: 416 SDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYY 475
D+ + P ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YY
Sbjct: 497 EDSDSEPEP-EDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYY 553
Query: 476 YEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEH 534
Y+G SW+W+YP+HYAPFASD + + + FE G PFKP QL+GVFP+AS + LP
Sbjct: 554 YQGCASWKWYYPFHYAPFASDFEGIADMSSEFEKGTKPFKPLEQLMGVFPAASGNFLPPT 613
Query: 535 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 594
+RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE
Sbjct: 614 WRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEE 673
Query: 595 ARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYIS-- 652
RRNS+ D+LFV HPL I L Q E V+V EL G+ G S
Sbjct: 674 NRRNSLGGDVLFVGKLHPLRDFILEL----YQTGSTEPVDVPH----ELCHGIQGTFSLD 725
Query: 653 PCAGDPHPPVFRSPVASMEDIMGNQVLCAIYKLPD-AHKHV--------TRPPAGVIFP 702
A P V SPV + D+ N + +K P A +V R PA V+ P
Sbjct: 726 EEAILPDQKVC-SPVPMLRDLTQNTAVSINFKDPQFAEDYVFKAAMLPGARKPATVLKP 783
>gi|405969602|gb|EKC34564.1| 5'-3' exoribonuclease 2 [Crassostrea gigas]
Length = 954
Score = 533 bits (1373), Expect = e-148, Method: Compositional matrix adjust.
Identities = 309/743 (41%), Positives = 430/743 (57%), Gaps = 62/743 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAV 59
MNQQRSRRFRASK+ + E RLR E +G LPP K + FDSN ITPGT FM
Sbjct: 111 MNQQRSRRFRASKETKEKIEEMSRLRDELTTKGFNLPPEKEKGEHFDSNCITPGTPFMFR 170
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
L+ L+YYIH RLNNDPGW+ IK+ILSDANVPGEGEHKIM Y+R QR P +DPNT+HCL
Sbjct: 171 LADCLRYYIHERLNNDPGWQNIKIILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTKHCL 230
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
G DADL+ML LATHE HF+I+RE F P Q C LCGQ GH C G K GE D
Sbjct: 231 CGADADLLMLGLATHEPHFTIIRE-EFKPNQPRPCDLCGQLGHEMKECMGLPKEMCGEND 289
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
E +V+ ++ + F+ + LREYL+ E + N PF+ D E +DD++FMCFFVGNDFLP
Sbjct: 290 EL-PKVMGAEQEFIFIRLNILREYLERELLMDNLPFKYDFERAIDDWVFMCFFVGNDFLP 348
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR- 298
H+P+LEIREGAI+ L+ +YK R GGYLT+ +L RV+ + +G ED IF++R
Sbjct: 349 HLPSLEIREGAIDRLVKLYKSCVRRTGGYLTNSGVVNLERVQVVMSDLGEVEDEIFKRRR 408
Query: 299 ---ARLHQRHAERIKREK-AQARRGDDVEP---LAQPDSLVPVSRFH---------GSRL 342
+R+ +R +REK Q + P + + L+ F G +
Sbjct: 409 DTELEFRRRNKQRKEREKRVQFLLSFNRAPVMIICKNSKLICECCFQFSQGPRWTPGGQF 468
Query: 343 A--------SGPSP-SPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSF 393
A SGPS S +Q GR+D + ++ + ++ A + A + + +
Sbjct: 469 APQPVGHSHSGPSAISNPRQEVAKGRMDTMRDSANK-------NAAAELKAMMTKDDQRG 521
Query: 394 ETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEER 453
E E++ + +D + P D+V+L E GWK+RYY KF +
Sbjct: 522 EKRKAEDQSK-----------PNDEEEEEEP-ADEVRLWEDGWKDRYYSSKFGVDGSD-- 567
Query: 454 EETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGH-P 512
+E R+ V Y GLCWV+ YYY+G SW+W++PYHYAPFASD ++ Q + SFE P
Sbjct: 568 QEFRQTVANHYVRGLCWVLRYYYQGCASWKWYFPYHYAPFASDFVNIGQLSNSFEKQTVP 627
Query: 513 FKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLP 572
F+P QL+GVFP+AS LP +++LM DP SPI DFYP DF++D+NGK+Y+WQG+A LP
Sbjct: 628 FRPLEQLMGVFPAASKKHLPVTWQRLMCDPESPIIDFYPIDFKIDLNGKKYAWQGVALLP 687
Query: 573 FIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKER 632
F+DE RLL ++K+ LT+ E RN+ +D LFV + HP + L E E
Sbjct: 688 FVDEKRLLSALEKVYPDLTDAERERNTWGSDRLFVGIRHPSYSFFEGLYE-------GEL 740
Query: 633 VEVKERLNPELSDGMNGYI-SPCAGDPHPPVFRSPVASMEDIMGNQVLCAIYKLP---DA 688
+ +++P+ ++GM G + + SP+ ++ I N+ L +K P D
Sbjct: 741 TKEGVKVDPKNAEGMGGLVWADQRATLTGGTVESPLKELQPITDNRALSVHFKDPVYDDD 800
Query: 689 HKHVTRPPAGVIFPKKIVQLEDL 711
+ + G + P ++++ ED
Sbjct: 801 YLFESVVLEGAVMPDRVLKPEDF 823
>gi|392870672|gb|EAS32493.2| 5'-3' exoribonuclease 2 [Coccidioides immitis RS]
Length = 1016
Score = 533 bits (1373), Expect = e-148, Method: Compositional matrix adjust.
Identities = 301/768 (39%), Positives = 435/768 (56%), Gaps = 82/768 (10%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGR-----KLPPKSDSQVFDSNVITPGTE 55
MNQQRSRRFR++++A ++ ++ + ++ R ++ + + +DSNVITPGT
Sbjct: 111 MNQQRSRRFRSAQEAKEADEKKAEFAKLLRQQNRGKGDMEIAEEVVQKTWDSNVITPGTP 170
Query: 56 FMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNT 115
FM +LS AL+Y++ +LN DP WEK+K+I+SDA VPGEGEHKIM ++R QR+ P +D NT
Sbjct: 171 FMDILSAALRYWVAYKLNTDPAWEKVKIIISDATVPGEGEHKIMEFIRSQRSCPEHDANT 230
Query: 116 RHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRK 174
RH +YGLDADLIML LATHE HF +LRE V F + C LCGQ GH+A C GKAK K
Sbjct: 231 RHVIYGLDADLIMLGLATHEPHFRVLREDVFFQESKARTCHLCGQQGHVAEACTGKAKEK 290
Query: 175 AGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVG 234
GEFDEK + P KP+ +LH+ LREYL E +PN PF DLE +DD++FMCFFVG
Sbjct: 291 NGEFDEK--QRGTPLKPFIWLHVSVLREYLAAEMYVPNQPFPFDLERALDDWVFMCFFVG 348
Query: 235 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI 294
NDFLPH+P+LEIRE I+ L+A+++ +GGYLT L+R + +Q + ED I
Sbjct: 349 NDFLPHLPSLEIRENGIDTLIAIWRDNIPLMGGYLTQDGNVDLKRAQLILQGLAKQEDAI 408
Query: 295 FQK-------------------------RARLHQRHAERIKREKAQARRGDDVEPLAQPD 329
F++ AR RH+ + RRG D++ +A +
Sbjct: 409 FRRRRQTEERRNANAKRRKEQERQREEENARKRPRHSLENEPAGPSPRRGKDMDGIAPAN 468
Query: 330 SLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEA 389
+P+ L P + E + +G + + + S+ A + + ++
Sbjct: 469 --MPLFIPSKGEL-------PRAERELTHAMVVNRGAIYKANMANK-SAAAALKSQLISG 518
Query: 390 ENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEE----------------DKVKLGE 433
+ + + L + K+DA +DN E D V+L E
Sbjct: 519 ASEMSVEVSTSTSANDVSPSALGKRKADALETDNTTEQEDSERPPQEQDELPADSVRLWE 578
Query: 434 PGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPF 493
G+ +RYYE+KF+ + E R V Y EGLCWV+ YY++G SW W+YPYHYAPF
Sbjct: 579 QGYADRYYEQKFHVDPKDI--EFRHKVARAYVEGLCWVLLYYFQGCPSWTWYYPYHYAPF 636
Query: 494 ASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTD 553
A+D DL+ +I F G PF+PF QL+GV P+AS+HA+PE +R LM++P S I DFYP +
Sbjct: 637 AADFVDLEHMDIQFHKGAPFRPFEQLMGVLPAASNHAIPEIFRDLMSNPESEIIDFYPEE 696
Query: 554 FEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPL 613
F +D+NGK+++WQG+A LPFIDE+RLL+ + K L+EEE RN + D+LF+ HPL
Sbjct: 697 FPIDLNGKKFAWQGVALLPFIDESRLLEAMAKRYPRLSEEEKARNEMGRDILFISDRHPL 756
Query: 614 SASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYIS-PCAGDPHPPVFRSPVASMED 672
E K++ K +LN +S+G+ G + A PH S VAS++
Sbjct: 757 ------YKELVANFYSKKQTVPKFKLNMRVSEGLGGKVERDEAYIPH----SSLVASIDG 806
Query: 673 IM-----GNQVLCAIYKLPDA---HKHVTRPPAGVIFPKKIVQLEDLK 712
I ++ + +Y +P + HK + P GV F ++ D++
Sbjct: 807 IELPALDEDRSISVLYDIPKSMYTHKSMLLP--GVKFNPPVLDKTDIE 852
>gi|320038785|gb|EFW20720.1| 5'-3' exoribonculease Dhp1 [Coccidioides posadasii str. Silveira]
Length = 1016
Score = 533 bits (1373), Expect = e-148, Method: Compositional matrix adjust.
Identities = 307/768 (39%), Positives = 433/768 (56%), Gaps = 82/768 (10%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGR-----KLPPKSDSQVFDSNVITPGTE 55
MNQQRSRRFR++++A ++ ++ + ++ R ++ + + +DSNVITPGT
Sbjct: 111 MNQQRSRRFRSAQEAKEADEKKAEFAKLLRQQNRGKGDMEIAEEVVQKTWDSNVITPGTP 170
Query: 56 FMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNT 115
FM +LS AL+Y++ +LN DP WEK+K+I+SDA VPGEGEHKIM ++R QR+ P +D NT
Sbjct: 171 FMDILSAALRYWVAYKLNTDPAWEKVKIIISDATVPGEGEHKIMEFIRSQRSCPEHDANT 230
Query: 116 RHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRK 174
RH +YGLDADLIML LATHE HF +LRE V F + C LCGQ GH+A C GKAK K
Sbjct: 231 RHVIYGLDADLIMLGLATHEPHFRVLREDVFFQESKARTCHLCGQQGHVAEACTGKAKEK 290
Query: 175 AGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVG 234
GEFDEK + P KP+ +LH+ LREYL E +PN PF DLE +DD++FMCFFVG
Sbjct: 291 NGEFDEK--QRGTPLKPFIWLHVSVLREYLAAEMYVPNQPFPFDLERALDDWVFMCFFVG 348
Query: 235 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI 294
NDFLPH+P+LEIRE I+ L+A+++ +GGYLT L+R + +Q + ED I
Sbjct: 349 NDFLPHLPSLEIRENGIDTLIAIWRDNIPLMGGYLTQDGNVDLKRAQLILQGLAKQEDAI 408
Query: 295 FQK-------------------------RARLHQRHAERIKREKAQARRGDDVEPLAQPD 329
F++ AR RH+ + RRG D++ +A +
Sbjct: 409 FRRRRQTEERRNTNAKRRKEQERQREEENARKRPRHSLENETAGPSPRRGKDMDGIAPAN 468
Query: 330 SLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEA 389
+P+ F S+ + + V R K L S GA+ +
Sbjct: 469 --MPL--FIPSKGELPRAERELTHAMVVNRGAIYKANMANKSAAAALKSQLISGASEMSV 524
Query: 390 ENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEE----------------DKVKLGE 433
E S T + L + K+DA +DN E D V+L E
Sbjct: 525 EVSTSTSAND------VSPSALGKRKADALETDNTTEQEDSERPPQEQDELPADSVRLWE 578
Query: 434 PGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPF 493
G+ +RYYE+KF+ + E R V Y EGLCWV+ YY++G SW W+YPYHYAPF
Sbjct: 579 QGYADRYYEQKFHVDPKDI--EFRHKVARAYVEGLCWVLLYYFQGCPSWTWYYPYHYAPF 636
Query: 494 ASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTD 553
A+D DL+ +I F G PF+PF QL+GV P+AS+HA+PE +R LM++P S I DFYP +
Sbjct: 637 AADFVDLEHMDIQFHKGAPFRPFEQLMGVLPAASNHAIPEIFRDLMSNPESEIIDFYPEE 696
Query: 554 FEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPL 613
F +D+NGK+++WQG+A LPFIDE+RLL+ + K L+EEE RN + D+LF+ HPL
Sbjct: 697 FPIDLNGKKFAWQGVALLPFIDESRLLEAMAKRYPRLSEEEKARNEMGRDILFISDRHPL 756
Query: 614 SASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYIS-PCAGDPHPPVFRSPVASMED 672
E K++ K +LN +S+G+ G + A PH S VAS++
Sbjct: 757 ------YKELVANFYSKKQSVPKFKLNMRVSEGLGGKVERDEAYIPH----SSLVASIDG 806
Query: 673 IM-----GNQVLCAIYKLPDA---HKHVTRPPAGVIFPKKIVQLEDLK 712
I ++ + +Y +P + HK + P GV F ++ D++
Sbjct: 807 IELPALDEDRSISVLYDIPKSMYTHKSMLLP--GVKFNPPVLDKTDIE 852
>gi|303317580|ref|XP_003068792.1| XRN 5'-3' exonuclease N-terminus domain containing protein
[Coccidioides posadasii C735 delta SOWgp]
gi|240108473|gb|EER26647.1| XRN 5'-3' exonuclease N-terminus domain containing protein
[Coccidioides posadasii C735 delta SOWgp]
Length = 1016
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 307/768 (39%), Positives = 433/768 (56%), Gaps = 82/768 (10%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGR-----KLPPKSDSQVFDSNVITPGTE 55
MNQQRSRRFR++++A ++ ++ + ++ R ++ + + +DSNVITPGT
Sbjct: 111 MNQQRSRRFRSAQEAKEADEKKAEFAKLLRQQNRGKGDMEIAEEVVQKTWDSNVITPGTP 170
Query: 56 FMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNT 115
FM +LS AL+Y++ +LN DP WEK+K+I+SDA VPGEGEHKIM ++R QR+ P +D NT
Sbjct: 171 FMDILSAALRYWVAYKLNTDPAWEKVKIIISDATVPGEGEHKIMEFIRSQRSCPEHDANT 230
Query: 116 RHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRK 174
RH +YGLDADLIML LATHE HF +LRE V F + C LCGQ GH+A C GKAK K
Sbjct: 231 RHVIYGLDADLIMLGLATHEPHFRVLREDVFFQESKARTCHLCGQQGHVAEACTGKAKEK 290
Query: 175 AGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVG 234
GEFDEK + P KP+ +LH+ LREYL E +PN PF DLE +DD++FMCFFVG
Sbjct: 291 NGEFDEK--QRGTPLKPFIWLHVSVLREYLAAEMYVPNQPFPFDLERALDDWVFMCFFVG 348
Query: 235 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI 294
NDFLPH+P+LEIRE I+ L+A+++ +GGYLT L+R + +Q + ED I
Sbjct: 349 NDFLPHLPSLEIRENGIDTLIAIWRDNIPLMGGYLTQDGNVDLKRAQLILQGLAKQEDAI 408
Query: 295 FQK-------------------------RARLHQRHAERIKREKAQARRGDDVEPLAQPD 329
F++ AR RH+ + RRG D++ +A +
Sbjct: 409 FRRRRQTEERRNTNAKRRKEQERQREEENARKRPRHSLEDETAGPSPRRGKDMDGIAPAN 468
Query: 330 SLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEA 389
+P+ F S+ + + V R K L S GA+ +
Sbjct: 469 --MPL--FIPSKGELPRAERELTHAMVVNRGAIYKANMANKSAAAALKSQLISGASEMSV 524
Query: 390 ENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEE----------------DKVKLGE 433
E S T + L + K+DA +DN E D V+L E
Sbjct: 525 EVSTSTSAND------VSPSALGKRKADALETDNTTEQEDSERPPQEQDELPADSVRLWE 578
Query: 434 PGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPF 493
G+ +RYYE+KF+ + E R V Y EGLCWV+ YY++G SW W+YPYHYAPF
Sbjct: 579 QGYADRYYEQKFHVDPKDI--EFRHKVARAYVEGLCWVLLYYFQGCPSWTWYYPYHYAPF 636
Query: 494 ASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTD 553
A+D DL+ +I F G PF+PF QL+GV P+AS+HA+PE +R LM++P S I DFYP +
Sbjct: 637 AADFVDLEHMDIQFHKGAPFRPFEQLMGVLPAASNHAIPEIFRDLMSNPESEIIDFYPEE 696
Query: 554 FEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPL 613
F +D+NGK+++WQG+A LPFIDE+RLL+ + K L+EEE RN + D+LF+ HPL
Sbjct: 697 FPIDLNGKKFAWQGVALLPFIDESRLLEAMAKRYPRLSEEEKARNEMGRDILFISDRHPL 756
Query: 614 SASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYIS-PCAGDPHPPVFRSPVASMED 672
E K++ K +LN +S+G+ G + A PH S VAS++
Sbjct: 757 ------YRELVANFYSKKQSVPKFKLNMRVSEGLGGKVERDEAYIPH----SSLVASIDG 806
Query: 673 IM-----GNQVLCAIYKLPDA---HKHVTRPPAGVIFPKKIVQLEDLK 712
I ++ + +Y +P + HK + P GV F ++ D++
Sbjct: 807 IELPALDEDRSISVLYDIPKSMYTHKSMLLP--GVKFNPPVLDKTDIE 852
>gi|327270678|ref|XP_003220116.1| PREDICTED: 5'-3' exoribonuclease 2-like [Anolis carolinensis]
Length = 957
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 310/724 (42%), Positives = 421/724 (58%), Gaps = 59/724 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ + A E++R+R+E R+G LPP+ + FDSN ITPGTEFM L
Sbjct: 111 MNQQRSRRFRASKEGVEGAEEKQRIREEIMRKGGFLPPEEVKERFDSNCITPGTEFMDNL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YY+ RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 171 AKCLRYYVADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LCGQ GH C+G K K GE D+
Sbjct: 231 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCGQFGHEVKECQGLPKEKQGEHDQ 289
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D ++ + F+ + L+EYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 290 FADSPPGMEQEFIFIRLCVLKEYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIREGAI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 350 LPSLEIREGAIDRLVNIYKNVVHKTGGYLTENGYVNLQRVQMIMLAVGEVEDSIFKKRKD 409
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRL 360
+ R K ++ + +R Q P G+R + P +P + + R+
Sbjct: 410 DEENFKRRQKEKRKRMKREQHSMAGGQ---FTPQPLGRGNRSSHQPISNP-RHTAYEMRM 465
Query: 361 DNGKGTSGRPHKVPRLSSGAT---IGAAIVEAENS-FETDPQENKEEFKAKLKELLRDKS 416
+ + T+ +S T G +AE+S E +P++N
Sbjct: 466 QDRQNTTPSASPNTSFTSDGTPSPAGGIKRKAEDSDSEPEPEDN---------------- 509
Query: 417 DAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYY 476
V+L E GWK+RYY+ KF+ +++ R VV Y EGLCWV+ YYY
Sbjct: 510 ------------VRLWEAGWKQRYYKNKFDVDVNDKK--FRHKVVQSYVEGLCWVLRYYY 555
Query: 477 EGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHY 535
+G SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP +
Sbjct: 556 QGCASWKWYYPFHYAPFASDFEGIADMFSDFEKGTKPFKPLEQLMGVFPAASGNFLPVTW 615
Query: 536 RKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEA 595
RKLMTDP S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL + ++ LT EE
Sbjct: 616 RKLMTDPESSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALAEVYPDLTPEEK 675
Query: 596 RRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCA 655
RRNS+ D+LFV HPL I +Q K E+ V + PEL G+ G ++
Sbjct: 676 RRNSLGGDVLFVGKHHPLHDFI------LEQYKSDEKQAVG--MPPELCHGIQGKLT-LN 726
Query: 656 GDPHPP--VFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKP 713
+P P SPV + D+ N + +K P + +F K +V KP
Sbjct: 727 ENPVLPDETVHSPVPVLRDLTQNTAISINFKDPQFQED-------FVF-KAVVLSGAKKP 778
Query: 714 APVL 717
+PVL
Sbjct: 779 SPVL 782
>gi|33337899|gb|AAQ13577.1|AF152169_1 DHP protein [Homo sapiens]
Length = 950
Score = 532 bits (1371), Expect = e-148, Method: Compositional matrix adjust.
Identities = 310/718 (43%), Positives = 418/718 (58%), Gaps = 61/718 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 111 MNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 171 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIMLA +F+I+RE F P + C LC Q GH +CEG ++ K G+ DE
Sbjct: 231 GADADLIMLAFPHMNPNFTIIRE-EFKPNRPKPCGLCNQFGHEVKDCEGLSREKKGKHDE 289
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + FL + LREY++ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 290 LADSLPCAEGEFIFLRLNVLREYVERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIRE AI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 350 LPSLEIRENAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKD 409
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSE 355
R K ++ + +R +P P ++ GS++AS P + Y+
Sbjct: 410 DEDSFRRRQKEKRKRMKRD---QPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYEM-- 464
Query: 356 CVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDK 415
R+ N S P+ SF +D + L + R
Sbjct: 465 ---RMQNNSSPSISPN-------------------TSFTSDGS------PSPLGGIKRKA 496
Query: 416 SDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYY 475
D+ + P ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YY
Sbjct: 497 EDSDSEPEP-EDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYY 553
Query: 476 YEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEH 534
Y+G SW+W+YP+HYAPFASD + + + FE G PFKP QL+GVFP+AS + LP
Sbjct: 554 YQGCASWKWYYPFHYAPFASDFEGIADMSSEFEKGTKPFKPLEQLMGVFPAASGNFLPPS 613
Query: 535 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 594
+RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE
Sbjct: 614 WRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEE 673
Query: 595 ARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPC 654
RRNS+ D+LFV HPL I L Q E VEV PEL G+ G S
Sbjct: 674 TRRNSLGGDVLFVGKHHPLHDFILEL----YQTGSTEPVEVP----PELCHGIQGKFSLD 725
Query: 655 AGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHV--------TRPPAGVIFP 702
P + SPV + D+ N V+ +K P A ++ R PA V+ P
Sbjct: 726 EEAILPDQIVCSPVPMLRDLTQNTVVSINFKDPQFAEDYIFKAVMLPGARKPAAVLKP 783
>gi|324502555|gb|ADY41124.1| 5'-3' exoribonuclease 2 [Ascaris suum]
Length = 934
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 344/874 (39%), Positives = 463/874 (52%), Gaps = 104/874 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDS-QVFDSNVITPGTEFMAV 59
MNQQRSRRFRASK+AA+ + +R+ E+EG LPPK + + FDSN ITPGT FMA
Sbjct: 111 MNQQRSRRFRASKEAAEKLQQIAEVRERLEKEGFPLPPKKEEGEHFDSNCITPGTPFMAR 170
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
L+ AL+YY+H+RLNNDPGW I+VILSDAN PGEGEHKIM ++R QR P +DPNT HCL
Sbjct: 171 LADALRYYVHMRLNNDPGWANIEVILSDANAPGEGEHKIMDFIRRQRASPSHDPNTVHCL 230
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
G DADLIML LATHE +F+I+RE F P QQ C LCGQ GH +C+G A+ +A E D
Sbjct: 231 CGADADLIMLGLATHEPNFNIIRE-EFIPNQQRPCDLCGQYGHEVKDCQGLAQDEAAECD 289
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
+ + + F+ + LREYL+ E ++ N DLE +DD++FMCFFVGNDFLP
Sbjct: 290 ANP---MQKETNFIFVRLPVLREYLERELQMNNSSVPFDLERAIDDWVFMCFFVGNDFLP 346
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIRE AI+ L+ +YK +GGYLT+ + RV+ + +G ED IF+ R
Sbjct: 347 HLPSLEIRENAIDRLIRLYKDMVAKVGGYLTNQGDVYMDRVQKILNGLGEVEDEIFKNR- 405
Query: 300 RLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLA-SGPSPSPYQQSECVG 358
Q+ + +R KA+ RR E A + +PV GS LA P + ++
Sbjct: 406 --QQKELQFRERNKAKRRR----ERAATTPAYIPV---RGSLLAPQANGPVSFSGAD-TR 455
Query: 359 RLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDA 418
RL ++ SS A V+A + P++ K E
Sbjct: 456 RLARDARVQAMEYQ--NASSKANTVVTTVQA-----SGPRKRKME--------------- 493
Query: 419 FNSDNPEE--DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYY 476
+SD+ EE D+V+L E GWKERYY KF + R V Y EGLCWV+ YYY
Sbjct: 494 -DSDSEEEVYDEVRLWETGWKERYYRSKFEVDGND--IAFRHKVAWAYVEGLCWVLKYYY 550
Query: 477 EGVCSWQWFYPYHYAPFASDLKDLDQFNISFEL-GHPFKPFNQLLGVFPSASSHALPEHY 535
+G SW W++PYHYAPFASD + QF F PFKP QL+ VFP+AS LPE +
Sbjct: 551 QGCVSWNWYFPYHYAPFASDFDTISQFKPDFSAHTEPFKPLEQLMAVFPAASKKHLPESW 610
Query: 536 RKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEA 595
+ LMT SPI DFYP DF+VD+NGK+Y+WQG+A LPF+DE RLL+ + + L + E
Sbjct: 611 QDLMTSEESPIIDFYPEDFQVDLNGKKYAWQGVALLPFVDEHRLLETLATVYDKLDDFER 670
Query: 596 RRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISP-- 653
RNS D +FV HP S + L E E ++P ++G+ G +
Sbjct: 671 ERNSRGPDRIFVGRKHPFSKFLQQLYEG----SCPENEGTLIAIDPSFTNGLAGSVGVDS 726
Query: 654 ----CAGDPHPPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLE 709
H P+ P+ DI N + AIY+ P K P + K++ +
Sbjct: 727 KVVRIGERYHSPI---PLDCCPDIPSNSAIMAIYQDPQFEKSFIFPAKRLAGAKEVPRT- 782
Query: 710 DLKPAPVLWHEDSGRRPHEN-GRHNPHGTISGRQLGEAAHRLVANSLQ--------HMKV 760
LKP+ W+ + RP R P G +L +A HR++A+ +
Sbjct: 783 -LKPSD--WNSNEAYRPQIGFTRDVPRG-----RLSDAGHRMIAHEMASRYGPGGFQTSE 834
Query: 761 DRNGYGDRMHGSPLPYAAAPYVPPVPSYQEYGV---YDQGYNR-----------FSQPRT 806
R R + P+PY P +PP + G D GY R + P
Sbjct: 835 SRWQVERRRYDFPVPY---PLLPPSAVGRYDGRPMNLDAGYGRREDYYSGAEGYYGGP-I 890
Query: 807 DSYPAGHS----------QSSISAAQPPYDGGYS 830
S P HS Q ++PP+ GGY+
Sbjct: 891 SSLPRNHSFHVFEERPGFQGERGYSRPPFRGGYN 924
>gi|147862841|emb|CAN82967.1| hypothetical protein VITISV_021856 [Vitis vinifera]
Length = 500
Score = 530 bits (1364), Expect = e-147, Method: Compositional matrix adjust.
Identities = 316/540 (58%), Positives = 361/540 (66%), Gaps = 83/540 (15%)
Query: 484 WFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPN 543
WFYPYHYAPFASDLKDL Q NISFELG PFKPFNQLLGVFP+ASSHALPE YRKLMTDPN
Sbjct: 27 WFYPYHYAPFASDLKDLGQLNISFELGSPFKPFNQLLGVFPAASSHALPEEYRKLMTDPN 86
Query: 544 SPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMAD 603
SPI DFYPTDFEVDMNGKR++WQGIAKLPFIDEARLL EV+KIEHTLTEEE RRNS+M D
Sbjct: 87 SPIIDFYPTDFEVDMNGKRFAWQGIAKLPFIDEARLLAEVQKIEHTLTEEEFRRNSVMFD 146
Query: 604 MLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVF 663
MLFV LSHPLS I++LD+ CK+L ER EVKE+L+P S GMNGYIS C GDP PP+F
Sbjct: 147 MLFVALSHPLSPYIFSLDDRCKKLTDNERTEVKEQLDPRASGGMNGYISLCGGDPCPPIF 206
Query: 664 RSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKPAPVLWHEDSG 723
RSP+AS+EDIM NQV+CAIY+LPDAHKH+TRPP GV FPKKIV + DLKP PVLWHED+G
Sbjct: 207 RSPIASLEDIMDNQVICAIYRLPDAHKHITRPPVGVTFPKKIVSVGDLKPEPVLWHEDNG 266
Query: 724 RRPHENGRHNPHGTISGRQLGEAAHRLVANSLQHMKVDRNGYGDRMHGSPLPYAAAPYVP 783
RRP ENGR N GTISGRQLGEAAHRLV NSLQ +K +RNG+GD+MH PY AAPY P
Sbjct: 267 RRPWENGRQNLPGTISGRQLGEAAHRLVVNSLQ-VKAERNGFGDQMHAP-PPYPAAPYGP 324
Query: 784 PVPSYQEYGVYDQGYNRFSQPRTDSYPAGHSQSSISAA-QPPYDGGYSQ-HYASNTSHHP 841
P+ SY + ++Q ++R + PR D + +SS A+ + +D Y Q H +S T HH
Sbjct: 325 PLSSYSDNRYHNQEHHRMALPRPDYSDQTYRRSSNPASVRNHFDHRYDQPHASSATGHHY 384
Query: 842 NRRYHPQYDRNSSGEHPTHLYNPSGIHQNGGPRYPPRPMGST--SSGANLYPPQGGYS-- 897
NR P H Y G HQN GP Y PR T +GA L P QGG++
Sbjct: 385 NRS-------------PVHGYYQPGFHQNDGPGYHPRQEAQTHIPAGAXL-PGQGGHNSH 430
Query: 898 -GYQSPAAGSFNQWG------GANQSMPRGYGQGQHHQRRDGGYQQYHDQQRNYSHLQGN 950
GYQS A S+++W G NQS PRG+G H QGN
Sbjct: 431 HGYQSYGASSYHEWASGWPPEGNNQSNPRGHG-----------------------HPQGN 467
Query: 951 HQQRGNQGQHQPRGNQGQYVRDNQHRGNYGHHQQNNQQRNNQFTALDRRPKR--PPPGGD 1008
PRG YGH QQ NQ++ LDRR R PPPG D
Sbjct: 468 -----------PRG--------------YGH----PQQLGNQYSVLDRRANRGPPPPGYD 498
>gi|126303629|ref|XP_001373979.1| PREDICTED: 5'-3' exoribonuclease 2 [Monodelphis domestica]
Length = 947
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 293/693 (42%), Positives = 406/693 (58%), Gaps = 52/693 (7%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ +S E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 111 MNQQRSRRFRASKEGMESTIEKQRVREEILSKGGFLPPEEIKERFDSNCITPGTEFMDNL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 171 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +C+G + K GE D+
Sbjct: 231 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQLGHEVKDCQGLPREKQGEHDQ 289
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
+ + + + ++ + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 290 FEESLPASEGEFIYIRLNVLREYLERELTMASLPFTFDIERSIDDWVFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIREGAI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 350 LPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKD 409
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRF-----HGSRLASGPSPSPYQQSE 355
+ R K ++ + +R +P P ++ HGS++AS P + ++
Sbjct: 410 DEESFKRRQKEKRKRMKRD---QPAFVPSGILTPQALGTRNSHGSQVASNPRQAAFEM-- 464
Query: 356 CVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDK 415
R+ N P+ + G I +++P+
Sbjct: 465 ---RMHNNSSPLTSPNTSFTSDGSPSPGGGIKRKAEDSDSEPE----------------- 504
Query: 416 SDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYY 475
ED V+L E GWK+RYY+ KF+ +++ R+ VV Y EGLCWV+ YY
Sbjct: 505 ---------PEDNVRLWESGWKQRYYKNKFDVDAADDK--FRRKVVQSYVEGLCWVLRYY 553
Query: 476 YEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEH 534
Y+G SW+W+YP+HYAPFASD + FE G PFKP QL+GVFP+AS + LP
Sbjct: 554 YQGCASWKWYYPFHYAPFASDFDGIADMPSDFEKGTRPFKPLEQLMGVFPAASGNFLPPS 613
Query: 535 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 594
+RKLM+DP S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT +E
Sbjct: 614 WRKLMSDPESSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPDE 673
Query: 595 ARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPC 654
RRNS+ D++FV HPL + L + E V+ L PEL G+ G ++
Sbjct: 674 TRRNSLGGDVMFVGKHHPLCDFLSEL----YKTGSTEAVD----LPPELCHGIQGKLTLH 725
Query: 655 AGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLP 686
P + SPV + D+ N + +K P
Sbjct: 726 KEAILPDQIVYSPVPVLRDLTQNTAISINFKDP 758
>gi|345562792|gb|EGX45805.1| hypothetical protein AOL_s00117g10 [Arthrobotrys oligospora ATCC
24927]
Length = 1102
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 287/718 (39%), Positives = 415/718 (57%), Gaps = 46/718 (6%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR++++A + + + +G + + +DSN ITPGT FM +L
Sbjct: 156 MNQQRSRRFRSAQEAKEKEEQVAEFVKLLASKGTDIDSNLQKKGWDSNAITPGTPFMDIL 215
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
SIAL+Y++ +LN DPGW K+K+I+SD++VPGEGEHKIM +VR QR+ P +DPNTRH +Y
Sbjct: 216 SIALKYWVAHKLNTDPGWAKLKIIISDSSVPGEGEHKIMEFVRGQRSHPEHDPNTRHVIY 275
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADLIML LATHE HF +LRE VF + + C +C Q GH A C GKA+ K GEFD
Sbjct: 276 GLDADLIMLGLATHEPHFRVLREDVFAQDSKPRVCKICNQKGHRAEECTGKAREKEGEFD 335
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
EK P+KP+ +L + LREYL E +P F+ DLE +DD++F+CFFVGNDFLP
Sbjct: 336 EKSK--ANPRKPFIWLDVGILREYLAVELHVPGLSFQWDLERAIDDWVFLCFFVGNDFLP 393
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H P+LEIR+ I+ L +++++ A+ G++T +L R + + + ED IF+KR
Sbjct: 394 HFPSLEIRDAGIDTLTSIWRENLAAMKGFVTTDGNVNLERAQFILDGLAKQEDAIFRKRR 453
Query: 300 RLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRL-----ASGPSPSPYQQS 354
++ +R KR K Q ++ + V V R R+ A+ P +P S
Sbjct: 454 QVEERREANAKRRKLQEEANNN-----SGNDKVSVHRGKSERIPTAHPANIPLFAPNDHS 508
Query: 355 ECVGRLDNGKG-------TSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAK 407
+ +L++ T+ +K + A + + S + P E + + + +
Sbjct: 509 DKTKQLNHDVVVNRAEIRTANYANKSAAAALKAQLLQNTITTNPSTDEQPAETEAQPETE 568
Query: 408 LKELL-RDKSDAFNSDNPEE------------DKVKLGEPGWKERYYEEKFNAKTPEERE 454
+L + K D +D+ + D VKL EPG+++RYYE+KF P
Sbjct: 569 GASVLGKRKLDTMQADSGNQTPIEAAPGEGNADTVKLWEPGYRDRYYEQKFG--RPPSDT 626
Query: 455 ETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFK 514
R++V Y EGLCWV+ YY++G SW W+YPYHYAPFA D +++ + I+F LG PFK
Sbjct: 627 NFRREVANAYVEGLCWVLLYYFQGCPSWTWYYPYHYAPFAQDFENIGELKINFTLGKPFK 686
Query: 515 PFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFI 574
PF QL+GV P+AS H +P+ + LMT+ NS I DFYP DF +D+NGK+++WQG+A LPFI
Sbjct: 687 PFEQLMGVLPAASKHNIPKAFWPLMTEENSEIIDFYPEDFPIDLNGKKFAWQGVAILPFI 746
Query: 575 DEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVE 634
DE RLLD + KI + EE RN + ++L SHPL DE Q K V+
Sbjct: 747 DETRLLDAMNKIYPQIPAEEKERNEMGNELLLFSESHPL------YDELACQFFSKRAVD 800
Query: 635 VKERLNPELSDGMNGYISPCAGDPHPPVFRSPVASME-----DIMGNQVLCAIYKLPD 687
L+P LS+G++G + P +++ DI +Q + IY LP+
Sbjct: 801 GDHELDPRLSEGLSGGVRKDPNFIPRSTVSFPFTNVKSDIYGDIEDDQSMSVIYLLPE 858
>gi|1060921|dbj|BAA07524.1| Dhm1 protein [Mus musculus]
Length = 947
Score = 527 bits (1358), Expect = e-146, Method: Compositional matrix adjust.
Identities = 312/718 (43%), Positives = 412/718 (57%), Gaps = 61/718 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA K ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 111 MNQQRSRRFRAIKGGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P DPNT HCL
Sbjct: 171 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNQDPNTHHCLC 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 231 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCALCNQFGHEVKDCEGLPREKKGKHDE 289
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + FL + LREYL+ E + + PF D+E DD+ FMCFFVGNDFLPH
Sbjct: 290 LADSLPCAEGEFIFLRLNVLREYLERELTMASLPFPFDVERSNDDWEFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIREGAI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 350 LPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKD 409
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSE 355
R K ++ + +R +P P ++ G ++AS P + Y+
Sbjct: 410 DEDSFRRRQKEKRKRMKRD---QPAFTPSGILTPHALGSRNSPGCQVASNPRQAAYEM-- 464
Query: 356 CVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDK 415
R+ S P+ SF +D + L + R
Sbjct: 465 ---RMQRNSSPSISPN-------------------TSFASDGS------PSPLGGIRRKA 496
Query: 416 SDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYY 475
D+ + P ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YY
Sbjct: 497 EDSDSEPEP-EDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYY 553
Query: 476 YEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEH 534
Y+G SW+W YP+HYAPFASD + + + FE G PFKP QL+GVFP+AS + LP
Sbjct: 554 YQGCASWKWLYPFHYAPFASDFEGIADMSSEFEKGTKPFKPLEQLMGVFPAASGNFLPPT 613
Query: 535 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 594
+RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE
Sbjct: 614 WRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEE 673
Query: 595 ARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPC 654
RRNS+ D+LFV HPL I L Q E V+V PEL G+ G S
Sbjct: 674 NRRNSLGGDVLFVGKLHPLRDFILEL----YQTGSTEPVDVP----PELCHGIQGTFSLD 725
Query: 655 AGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHV--------TRPPAGVIFP 702
P SPV + D+ N + +K P A +V R PA V+ P
Sbjct: 726 EEAILPDQTVCSPVPMLRDLTQNTAVSINFKDPQFAEDYVFKAAMLPGARKPATVLKP 783
>gi|67516851|ref|XP_658311.1| hypothetical protein AN0707.2 [Aspergillus nidulans FGSC A4]
gi|74598763|sp|Q5BFH3.3|XRN2_EMENI RecName: Full=5'-3' exoribonuclease 2
gi|40746327|gb|EAA65483.1| hypothetical protein AN0707.2 [Aspergillus nidulans FGSC A4]
gi|259489019|tpe|CBF88946.1| TPA: 5'-3' exoribonuclease 2 (EC 3.1.13.-)
[Source:UniProtKB/Swiss-Prot;Acc:Q5BFH3] [Aspergillus
nidulans FGSC A4]
Length = 1032
Score = 526 bits (1356), Expect = e-146, Method: Compositional matrix adjust.
Identities = 300/745 (40%), Positives = 430/745 (57%), Gaps = 68/745 (9%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRK--------LPPKSDSQVFDSNVITP 52
MNQQR+RRFR++++A E++ +QEF+R K L + + +DSNVITP
Sbjct: 111 MNQQRARRFRSAQEAR----EQDEKKQEFQRMLAKQNGDKEQMLQEEVIQKTWDSNVITP 166
Query: 53 GTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYD 112
GT FM +L+ +L+Y+I +LN DP WEK+K+I+SDA VPGEGEHKIM ++R QR P +D
Sbjct: 167 GTPFMDILAASLRYWIAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFIRSQRASPEHD 226
Query: 113 PNTRHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKA 171
PN RH +YGLDADLIML LATHE HF +LRE V F +Q C LCGQPGH A C G+A
Sbjct: 227 PNARHVIYGLDADLIMLGLATHEPHFRVLREDVFFQESKQRTCHLCGQPGHKAEECRGQA 286
Query: 172 KRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCF 231
K K GEFDEKG + KP+ +LH+ LREYL E +P+ PF DLE +DD++FMCF
Sbjct: 287 KEKNGEFDEKGKGATL--KPFIWLHVSILREYLAAELYVPHQPFPFDLERALDDWVFMCF 344
Query: 232 FVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYE 291
FVGNDFLPH+P+L+IRE I+ L+A+++ +GGYLT + L++ + +Q + E
Sbjct: 345 FVGNDFLPHLPSLDIREDGIDTLIAIWRDNIPLMGGYLTQDGRVDLKKAQLILQGLAKQE 404
Query: 292 DRIFQKRARLHQRHAERIKR----------EKAQARR--GDDVEPLAQPDSLVPVSRFHG 339
D IF++R + +R KR E+A+ RR + + P P S
Sbjct: 405 DAIFRRRRQAEERKLANEKRRKQEEKARNEERARKRRRSSPSYDAIESPTHAKPRSAGAA 464
Query: 340 SR-------LASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENS 392
+ + Q E + +G R + + S+ A + + ++ ++
Sbjct: 465 AAPPAGLELITPARGELARQTRELTHSMVVNRGNVYRANMANK-SAAAVLKSKLLGGQDG 523
Query: 393 FETDPQENKEEFKAKLKE----LLRDKSDA-----FNSDNPEE-----------DKVKLG 432
+D E+ E A+L L + K+D ++ P++ D V+L
Sbjct: 524 QPSDDGESTAESDAQLDAAGPVLGKRKADEAEVGQLGTETPDKPEPAKADELPPDTVRLW 583
Query: 433 EPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAP 492
E G+ +RYYE+KF P+++ E R V Y EGL WV+ YY++G SW W+YPYHYAP
Sbjct: 584 EEGYADRYYEQKFGVD-PQDK-EFRHKVARAYAEGLAWVLLYYFQGCPSWTWYYPYHYAP 641
Query: 493 FASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPT 552
FA+D D+ +SFE G PFKP+ QL+GV P++S+HA+P+ + LMT+P+S I DFYP
Sbjct: 642 FAADFVDIGDMELSFEKGTPFKPYEQLMGVLPASSNHAIPKVFHSLMTEPDSEIIDFYPE 701
Query: 553 DFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHP 612
DF VD+NGK+++WQG+ LPFIDE RLL + K LTE+E RN++ D+L + SHP
Sbjct: 702 DFPVDLNGKKFAWQGVVLLPFIDEKRLLAAMSKKYPLLTEDEKARNTVGRDVLLLSESHP 761
Query: 613 LSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPC-AGDPHPPVFRS----PV 667
L + + K++ K +LN +SDG+ G + A PH + S +
Sbjct: 762 LYQDLVS------NFYSKKQGAPKYKLNMRVSDGLAGKVEKNEAYIPHSSLVSSLEEYGM 815
Query: 668 ASMEDIMGNQVLCAIYKLPDAHKHV 692
S+ED V I K + HK +
Sbjct: 816 PSLEDDRSIMVNYEIPKSTNIHKSM 840
>gi|383854346|ref|XP_003702682.1| PREDICTED: 5'-3' exoribonuclease 2 homolog [Megachile rotundata]
Length = 944
Score = 526 bits (1355), Expect = e-146, Method: Compositional matrix adjust.
Identities = 326/842 (38%), Positives = 449/842 (53%), Gaps = 87/842 (10%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAV 59
MNQQRSRRFRASK+ + E +R+R E +G LPP K + FDSN ITPGT FMA
Sbjct: 111 MNQQRSRRFRASKETNEKINEIQRIRSELTLKGASLPPEKPKEEHFDSNCITPGTPFMAR 170
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
LS L YYIH RLNNDPGW IKVILSDANVPGEGEHKIM ++R QR P +DPNT+H L
Sbjct: 171 LSKCLHYYIHDRLNNDPGWRNIKVILSDANVPGEGEHKIMDFIRRQRAQPDHDPNTQHVL 230
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
G DADLIML LATHE +F+I+RE F P + C +CGQ GH C G + E +
Sbjct: 231 CGADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCDICGQLGHEMQECTGSEPNQKEEDN 289
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
G E + F+ + LREYL+ E ++PN PF+ D E ++DD++FMCFFVGNDFLP
Sbjct: 290 AFGSEC-----QFIFVRLNVLREYLERELQMPNLPFKYDFERVIDDWVFMCFFVGNDFLP 344
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIREGAI+ L+ +YKK GG+LTD +L RV+ + +G ED IF+KR
Sbjct: 345 HLPSLEIREGAIDRLVNLYKKTVYKTGGFLTDSGDVNLDRVQLIMSELGDVEDEIFKKR- 403
Query: 300 RLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGR 359
Q +REK + RR + +P +F + L P
Sbjct: 404 --QQNELAFKQREKDKKRRLLGIG--NNKPKWIPTGQFAPTALGGQIKP----------- 448
Query: 360 LDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAF 419
++N + + + + R +T + P+++ + K + + + D SD
Sbjct: 449 VENARYEAYQMRVLGRNYHSSTEQKGNTKEMLESMIRPEDSSNQGKKRKIDEVEDNSD-- 506
Query: 420 NSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGV 479
D+ D+V+L E G+K+RYYE KF+ + R +V L+Y GLCWV+ YYY+G
Sbjct: 507 --DDQAHDEVRLWEAGFKDRYYESKFDVSP--DNLAFRNNVALQYVRGLCWVLRYYYQGC 562
Query: 480 CSWQWFYPYHYAPFASDLKDLDQFNISFELGH-PFKPFNQLLGVFPSASSHALPEHYRKL 538
SW+W++PYHYAPFASD ++ + FE G PF+P QL+GVFP+ASS +P + KL
Sbjct: 563 ASWKWYFPYHYAPFASDFINIGGLSTEFEKGTVPFRPLEQLMGVFPAASSKHVPAPWAKL 622
Query: 539 MTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
M+DP SPI DFYP DF++D+NGK+++WQG+A LPF+DE RL ++ LTE E +RN
Sbjct: 623 MSDPRSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALEPYYDCLTEAEKKRN 682
Query: 599 SIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI---SPCA 655
D L+V L +S Y + + VE P DGM G + C
Sbjct: 683 VRGDDRLYV----GLGSSGYNFIKGLYTNHVGYDVET-----PICIDGMRGTVLLAEDCV 733
Query: 656 GDPHPPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPP---AGVIFPKKIVQLEDL- 711
GD SP+ + + N+V C ++ P + P GV P KI++ +D
Sbjct: 734 GD--GATLPSPINGLP-VRNNKVYCVRFRDPKYGSNFIFPAKRLKGVREPPKILKPQDFD 790
Query: 712 ---KPAPVLWHEDSGRRPHENGRHNPHGTISGRQLGEAAHRLVANSLQHMKVDRNGYGDR 768
+ + W G P + L +A R++ + H +V
Sbjct: 791 QMNRNSGNTWKPQIGFTP----------STQSVSLSDAGRRILGHYTNHNRV-------- 832
Query: 769 MHGSPLPYAAAPYVPPVPSYQEYGVYDQGYNRFSQPRTDSYPAGHSQSSISAAQP-PYDG 827
P PY P +YQ Y QGY ++ Y G+ + S P P+
Sbjct: 833 ----PPPYGLVSL--PQSTYQSY----QGY------QSSEYQGGYESAGSSQTAPGPWAR 876
Query: 828 GY 829
GY
Sbjct: 877 GY 878
>gi|239607237|gb|EEQ84224.1| 5'-3' exoribonuclease 2 [Ajellomyces dermatitidis ER-3]
gi|327351196|gb|EGE80053.1| 5'-3' exoribonuclease 2 [Ajellomyces dermatitidis ATCC 18188]
Length = 1031
Score = 526 bits (1354), Expect = e-146, Method: Compositional matrix adjust.
Identities = 301/763 (39%), Positives = 434/763 (56%), Gaps = 89/763 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERL-----RQEFEREGRKLPPKSDSQVFDSNVITPGTE 55
MNQQRSRRFR++++A ++ ++E +Q + G L + ++ +DSNVITPGT
Sbjct: 111 MNQQRSRRFRSAQEAKEADEKKEEFAKLLRKQNGNKGGEGLVEEVITKTWDSNVITPGTP 170
Query: 56 FMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNT 115
FM +L+ AL+Y++ +LN DP WEK+K+I+SDA VPGEGEHKIM ++R QR+ +DPNT
Sbjct: 171 FMDILAAALRYWVAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFIRSQRSCTEHDPNT 230
Query: 116 RHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRK 174
RH +YGLDADLIML LATHE HF +LRE V F + C LCGQPGH+A C+G AK K
Sbjct: 231 RHVIYGLDADLIMLGLATHEPHFRVLREDVFFQESKGRTCHLCGQPGHIAEACKGLAKEK 290
Query: 175 AGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVG 234
GEFDEKG P KP+ +LH+ LREYL E +P PF DLE +DD++FMCFFVG
Sbjct: 291 NGEFDEKGKGS--PLKPFIWLHVSVLREYLAVEMHVPQQPFPFDLERALDDWVFMCFFVG 348
Query: 235 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI 294
NDFLPH+P+L+IRE I+ L+A+++ +GGYLT L R + +Q + ED I
Sbjct: 349 NDFLPHLPSLDIRENGIDTLIAIWRDNIPVMGGYLTKDGHVDLDRAQLILQGLAKQEDAI 408
Query: 295 FQKRARLHQRH-----------------AERIKREKAQARRGDDVEPLAQPDSLVPVSRF 337
F++R + +R R KR + + + EP+ P L+ +
Sbjct: 409 FRRRRQTEERKNANAKRRKEEERFREEERSRKKRRSSPSYGSMENEPVPPP--LIVPGKG 466
Query: 338 HGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDP 397
H SR E + +G + + + S+ A + + +V+ T
Sbjct: 467 HISR----------ADRELTHAMVVNRGAVYKANMANK-SAAAVLKSQLVKGSGDAATPD 515
Query: 398 QENKEEFKAKLKELL---RDKSDAFNSDNPEE-------------DKVKLGEPGWKERYY 441
E+ + +AK L + K+DA ++ E D V+L E G+ +RYY
Sbjct: 516 VEDSADGRAKNTSPLSLGKRKADALETETESETPKKPQDNDELPPDTVRLWEDGYADRYY 575
Query: 442 EEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLD 501
E+KF + + E R V Y EGL WV+ YY++G SW W+YPYHYAPFA+D DL
Sbjct: 576 EQKF--RVDPKDTEFRHKVARAYVEGLAWVLLYYFQGCPSWTWYYPYHYAPFAADFVDLG 633
Query: 502 QFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGK 561
+ NI F G PFKPF QL+GV P+AS+HA+PE + LM+DP S I DFYP +F +D+NGK
Sbjct: 634 KMNIEFSRGAPFKPFEQLMGVLPAASNHAIPEVFHDLMSDPESEIIDFYPEEFPIDLNGK 693
Query: 562 RYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHP----LSASI 617
+++WQG+A LPFIDE RLL ++K L+ EE RN++ ++LF+ HP L+A+
Sbjct: 694 KFAWQGVALLPFIDEKRLLLAMEKRYPLLSSEEHARNTMGREVLFLSDRHPLYDNLTANF 753
Query: 618 YTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPC-AGDPH----PPVFRSPVASMED 672
Y+ + LK+ RV S+G+ G + A PH PP + + ++++
Sbjct: 754 YSKKQGTPILKLNMRV----------SEGLGGKVERNDAYVPHSSLVPPFDKVDLPTLDE 803
Query: 673 IMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKPAP 715
+ + IY +P + ++ K + L +KP P
Sbjct: 804 ---DHSISVIYDMPKS-----------MYTHKSMLLRGVKPDP 832
>gi|346319605|gb|EGX89206.1| 5'-3' exoribonuclease Dhp1 [Cordyceps militaris CM01]
Length = 970
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 307/755 (40%), Positives = 427/755 (56%), Gaps = 67/755 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFERE-GRKLPPKSDSQV----FDSNVITPGTE 55
MNQQRSRRFR++++A D +++ L + +++ G L +S + FD+N ITPGT
Sbjct: 112 MNQQRSRRFRSAQEAKDKENDKQELIKLLKQQNGGNLATESTEAIAKKAFDNNSITPGTP 171
Query: 56 FMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNT 115
FM +L+ +L+Y+ +LN DPGW K+KVI+SDA VPGEGEHKIM++VR QR P YDPNT
Sbjct: 172 FMDILASSLRYWCQYKLNTDPGWAKLKVIISDATVPGEGEHKIMNFVRSQRASPDYDPNT 231
Query: 116 RHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRK 174
RH +YGLDADLIML LATHE HF +LRE V F + C LCGQ GH A NC+G+ K K
Sbjct: 232 RHVIYGLDADLIMLGLATHEPHFRVLREDVFFQDSKARTCKLCGQRGHDAQNCKGETKGK 291
Query: 175 AGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVG 234
+GE DEK V++ KP+ +LH+ LREYL E IP PF DLE ++DD+IFMC FVG
Sbjct: 292 SGEVDEKDKPVIL--KPFIWLHVSVLREYLAAELAIPELPFRFDLERVIDDWIFMCCFVG 349
Query: 235 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI 294
NDFLPH+P LEIRE I+ L ++K+ ALGGY+T L R + + + ED I
Sbjct: 350 NDFLPHLPALEIREHGIDTLTTIWKQNLPALGGYITKDGHIDLERAQCILDGLAGQEDMI 409
Query: 295 FQKRARLHQRHAERIKREKAQ---------------ARRG--DDVEPLA-QPDSLVPVSR 336
F+KR R KR + Q R G D LA P +P +
Sbjct: 410 FKKRKEQEDRREANTKRRRLQNNGASGRDSRNDGKSLRSGHEDPSRGLALHPIESMPTAP 469
Query: 337 FHG---------SRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKV----PRLSSGATIG 383
G + ++ + + S RL G+GTSG + R S A
Sbjct: 470 LRGITHDMIVNRTSVSDATAANKSAASVLKERLIAGRGTSGHETNLNDTEDRSSQSAPSK 529
Query: 384 AAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEE 443
+ E+ ++ P E++ ++ N D V+L E G+ +RYY+
Sbjct: 530 RKLSAVESVEDSTPNESQ------------GTTNPANVSEAPADPVRLWEDGYADRYYQL 577
Query: 444 KFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQF 503
KF+ + P + RK V Y EGL WV+ YY++G SW+W+YPYHYAPFA+D KD+
Sbjct: 578 KFH-RDPGDIA-FRKHVAHAYVEGLAWVLQYYFQGCPSWEWYYPYHYAPFAADFKDISGA 635
Query: 504 NISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRY 563
N++FE G +PF QL+ V P+AS LPE + LMTD +S I DFYP +FEVD+NGK+
Sbjct: 636 NVAFEKGIISRPFEQLMSVLPAASRDNLPEIFHSLMTDRDSDIIDFYPEEFEVDLNGKKM 695
Query: 564 SWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEH 623
+WQG+A LPFI+ RLL+ V++ L++E+++RN + D+L + SH SIY DE
Sbjct: 696 AWQGVALLPFIEMDRLLEAVQRRYPLLSDEDSKRNGVGRDVLLLSDSH---ESIY--DEI 750
Query: 624 CKQLKIKERVEVKERLNPELSDGMNGYISPCA-----GDPHPPVFRSPVASMEDIMGNQV 678
K + + +LNP+ SDG++GY+ G H P+ R SM DI ++
Sbjct: 751 LTNFYSKRQGSAQFKLNPKTSDGLSGYVEKQEGYVPHGTLHYPLERK---SMPDIEYDRT 807
Query: 679 LCAIYKLPD-AHKHVTRPPAGVIFPKKIVQLEDLK 712
+ Y +P H H + GV P + D++
Sbjct: 808 MSVNYDMPKLTHDHKSMLLRGVKMPTPALTRSDIE 842
>gi|261200841|ref|XP_002626821.1| 5'-3' exoribonuclease 2 [Ajellomyces dermatitidis SLH14081]
gi|239593893|gb|EEQ76474.1| 5'-3' exoribonuclease 2 [Ajellomyces dermatitidis SLH14081]
Length = 1031
Score = 525 bits (1351), Expect = e-146, Method: Compositional matrix adjust.
Identities = 301/763 (39%), Positives = 433/763 (56%), Gaps = 89/763 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERL-----RQEFEREGRKLPPKSDSQVFDSNVITPGTE 55
MNQQRSRRFR++++A ++ ++E +Q + G L + ++ +DSNVITPGT
Sbjct: 111 MNQQRSRRFRSAQEAKEADEKKEEFAKLLRKQNGNKGGEGLVEEVITKTWDSNVITPGTP 170
Query: 56 FMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNT 115
FM +L+ AL+Y++ +LN DP WEK+K+I+SDA VPGEGEHKIM ++R QR+ +DPNT
Sbjct: 171 FMDILAAALRYWVAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFIRSQRSCTEHDPNT 230
Query: 116 RHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRK 174
RH +YGLDADLIML LATHE HF +LRE V F + C LCGQPGH+A C+G AK K
Sbjct: 231 RHVIYGLDADLIMLGLATHEPHFRVLREDVFFQESKGRTCHLCGQPGHIAEACKGLAKEK 290
Query: 175 AGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVG 234
GEFDEKG P KP+ +LH+ LREYL E +P PF DLE +DD++FMCFFVG
Sbjct: 291 NGEFDEKGKGS--PLKPFIWLHVSVLREYLAVEMHVPQQPFPFDLERALDDWVFMCFFVG 348
Query: 235 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI 294
NDFLPH+P+L+IRE I+ L+A+++ +GGYLT L R + +Q + ED I
Sbjct: 349 NDFLPHLPSLDIRENGIDTLIAIWRDNIPVMGGYLTKDGHVDLDRAQLILQGLAKQEDAI 408
Query: 295 FQKRARLHQRH-----------------AERIKREKAQARRGDDVEPLAQPDSLVPVSRF 337
F++R + +R R KR + + + EP+ P L+ +
Sbjct: 409 FRRRRQTEERKNANAKRRKEEERFREEERSRKKRRSSPSYGSMENEPVPPP--LIVPGKG 466
Query: 338 HGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDP 397
H SR E + +G + + + S+ A + + +V+ T
Sbjct: 467 HISR----------ADRELTHAMVVNRGAVYKANMANK-SAAAVLKSQLVKGSGDAATPD 515
Query: 398 QENKEEFKAKLKELL---RDKSDAFNSDNPEE-------------DKVKLGEPGWKERYY 441
E+ + AK L + K+DA ++ E D V+L E G+ +RYY
Sbjct: 516 VEDSADGGAKNTSPLSLGKRKADALETETESETPKKPQDNDELPPDTVRLWEDGYADRYY 575
Query: 442 EEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLD 501
E+KF + + E R V Y EGL WV+ YY++G SW W+YPYHYAPFA+D DL
Sbjct: 576 EQKF--RVDPKDTEFRHKVARSYVEGLAWVLLYYFQGCPSWTWYYPYHYAPFAADFVDLG 633
Query: 502 QFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGK 561
+ NI F G PFKPF QL+GV P+AS+HA+PE + LM+DP S I DFYP +F +D+NGK
Sbjct: 634 KMNIEFSRGAPFKPFEQLMGVLPAASNHAIPEVFHDLMSDPESEIIDFYPEEFPIDLNGK 693
Query: 562 RYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHP----LSASI 617
+++WQG+A LPFIDE RLL ++K L+ EE RN++ ++LF+ HP L+A+
Sbjct: 694 KFAWQGVALLPFIDEKRLLLAMEKRYPLLSSEEHARNTMGREVLFLSDRHPLYDNLTANF 753
Query: 618 YTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPC-AGDPH----PPVFRSPVASMED 672
Y+ + LK+ RV S+G+ G + A PH PP + + ++++
Sbjct: 754 YSKKQGTPILKLNMRV----------SEGLGGKVERNDAYVPHSSLVPPFDKVDLPTLDE 803
Query: 673 IMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKPAP 715
+ + IY +P + ++ K + L +KP P
Sbjct: 804 ---DHSISVIYDMPKS-----------MYTHKSMLLRGVKPDP 832
>gi|242070071|ref|XP_002450312.1| hypothetical protein SORBIDRAFT_05g003580 [Sorghum bicolor]
gi|241936155|gb|EES09300.1| hypothetical protein SORBIDRAFT_05g003580 [Sorghum bicolor]
Length = 696
Score = 524 bits (1350), Expect = e-145, Method: Compositional matrix adjust.
Identities = 274/609 (44%), Positives = 368/609 (60%), Gaps = 63/609 (10%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRF+A+KDA ++ EE+ LR++F EGR++ P+ ++V D NVITPGTEFM L
Sbjct: 121 MNQQRSRRFKAAKDAKEAELEEKLLREKFRAEGREVQPRETNEVSDPNVITPGTEFMEKL 180
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S AL+YYI RLN+DPGW+ IK ILSD+NVPGEGEHKIMS++R QR+L YDPNTRHCLY
Sbjct: 181 SKALEYYIRSRLNSDPGWKGIKAILSDSNVPGEGEHKIMSFIRGQRSLESYDPNTRHCLY 240
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIMLALA+HE+HFSILRE V Q + C + E +++ G F
Sbjct: 241 GLDADLIMLALASHELHFSILREDVLRSTQPENCIPLSKE---LFKTEDSSRKCRGWFPR 297
Query: 181 KGDEVV----VPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGND 236
+ PKKPYQFL+IW LREYL+ + +IPNP + D+E ++DDFIF+CF GND
Sbjct: 298 MTETTASRDRSPKKPYQFLNIWVLREYLELDLKIPNPVVKTDIERLIDDFIFICFLTGND 357
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSK--------PSLRRVEHFIQAVG 288
F+PH+P++EI EGAI+LL+ VYK+ F +GGY+ K + R+E F +
Sbjct: 358 FIPHIPSVEIHEGAIDLLLEVYKQAFNKMGGYIVSTEKLKDKHAAYLKVLRLEKFFHELS 417
Query: 289 SYEDRIFQKRARLHQRHAERIKR---EKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASG 345
E++IF KR L +R + R E+ + R D++E PD G
Sbjct: 418 LCEEKIFVKRYELRERLQRNLVRRAAEEWKERNYDNME--ENPD---------------G 460
Query: 346 PSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFK 405
P + + S +T G +++ E+D N E +
Sbjct: 461 PDLT--------------------------VKSFSTNGGICTNSQD--ESDVTANTLELR 492
Query: 406 AKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYT 465
LK+ LR+K D S + D ++LG GWK R++ EKF + E + + D+V +Y
Sbjct: 493 RNLKDTLRNKQDIVKSGACKHDAIRLGFAGWKSRFFREKFGVEKSNEVGKLKNDMVQKYL 552
Query: 466 EGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPS 525
EGLCWV+ YY+ V SW W+YP++YAPF SD K L QF ISF P +PF+QL+ V P
Sbjct: 553 EGLCWVLRYYFADVPSWSWYYPFYYAPFTSDFKGLSQFKISFTADKPLRPFDQLMAVLPK 612
Query: 526 ASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKK 585
SS ALP+ YR+LM + S I FYP+D ++D +GKR+ WQGIA LPFIDE L K
Sbjct: 613 ESSCALPKCYRELMENEESLIKKFYPSDLQIDTHGKRFLWQGIAMLPFIDEKLLTSATKT 672
Query: 586 IEHTLTEEE 594
+E L +E
Sbjct: 673 VEDKLAVKE 681
>gi|198426685|ref|XP_002129696.1| PREDICTED: similar to 5-3 exoribonuclease 2 [Ciona intestinalis]
Length = 886
Score = 523 bits (1348), Expect = e-145, Method: Compositional matrix adjust.
Identities = 309/737 (41%), Positives = 424/737 (57%), Gaps = 74/737 (10%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLP---PKSDSQVFDSNVITPGTEFM 57
MNQQRSRRFRASK+ + + +R E R G +LP PK++ FDSN ITPGTEFM
Sbjct: 111 MNQQRSRRFRASKEGVEQTELKASIRAELLRNGMRLPEVDPKAER--FDSNCITPGTEFM 168
Query: 58 AVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRH 117
L+ L++YI RLNNDPGW I+VILSDANVPGEGEHKIM ++R QR P +DPNT H
Sbjct: 169 FRLAACLRFYIIDRLNNDPGWRNIEVILSDANVPGEGEHKIMDFIRKQRGQPDHDPNTHH 228
Query: 118 CLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGE 177
C+ G DADLIML LATHE +F+I+RE F P Q C +C Q GH +C G + ++ E
Sbjct: 229 CICGADADLIMLGLATHEPNFTIIRE-EFKPNQPRPCGICAQYGHEMTDCCGLPRDQSDE 287
Query: 178 FDEKGDEVVVPKKP-----YQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFF 232
+ VV +P Y F+ I +REY+ E +P PF+ D E I+DD++ MCFF
Sbjct: 288 LN------VVQSQPHAGTNYIFIRICVIREYIKLEMEMPGLPFKYDFENIIDDWVMMCFF 341
Query: 233 VGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYED 292
VGNDFLPH+P+LEIREGAI+ L+ +YK GGYLT K +L RVE + +G ED
Sbjct: 342 VGNDFLPHLPSLEIREGAIDKLVRLYKDIVHQTGGYLTCNGKVNLSRVEKIMMGIGKLED 401
Query: 293 RIFQKR--ARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASG-PSPS 349
IF+KR + ++ R E+ KR++ + +G S +P S+F + L SG SP+
Sbjct: 402 EIFRKRRESDVNYRAREKAKRQRTKRDQG---------PSYIPGSQFAPTPLGSGFESPN 452
Query: 350 PYQQSECVGRLDNGKGT--SGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAK 407
P L N K + R + L + A++ A + ++ S + + K
Sbjct: 453 P---------LTNVKQSILEMRSKDLKNLDAAASLRAMLSKSSTSTQAESSAAK------ 497
Query: 408 LKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEG 467
+ N D+ +D V+L E GWKERY+ KFN + E R+ +V Y EG
Sbjct: 498 -------RKKEDNDDDEPDDDVRLWEDGWKERYFRAKFNVSMKD--FEFRRTLVRCYVEG 548
Query: 468 LCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSA 526
LCWV+ YYY+G SW+WF+P+HYAPFASD D+ F P +P QL+ VFP A
Sbjct: 549 LCWVLLYYYQGCASWKWFFPFHYAPFASDFFDISDLPNEFPTNTQPKRPLEQLMCVFPEA 608
Query: 527 SSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKI 586
S LP +RKLM DP SPI DFYP DF++D+NGK+Y+WQG+A LPF+DE R++ + ++
Sbjct: 609 SGQFLPTTWRKLMGDPESPIIDFYPEDFKIDLNGKKYAWQGVALLPFVDEDRMMSSLTRV 668
Query: 587 EHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDE-HCKQLKIKERVEVKERLNPELSD 645
LT +E +RNS D LFV + HPL A + L E + E ++ +P L+
Sbjct: 669 YDDLTPQEEKRNSRGNDYLFVGVHHPLHALLKGLYEGGTPPMSYDEAADI----DPGLAH 724
Query: 646 GMNGYISPCAGDPHPPVFRSPVAS-------MEDIMGNQVLCAIYK---LPDAHKHVTRP 695
GM G + D H V ++ V + ++ +M NQVL +K P+ H +
Sbjct: 725 GMAGKV---WNDEHCKVGQTVVHAPVPIHNCLDSVMNNQVLSMAFKDPAYPEGHIFEAKL 781
Query: 696 PAGVIFPKKIVQLEDLK 712
G FP V+ +DL+
Sbjct: 782 LPGAKFPPPSVKPQDLR 798
>gi|225681905|gb|EEH20189.1| 5'-3' exoribonuclease [Paracoccidioides brasiliensis Pb03]
Length = 1044
Score = 523 bits (1347), Expect = e-145, Method: Compositional matrix adjust.
Identities = 288/675 (42%), Positives = 400/675 (59%), Gaps = 49/675 (7%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERL-------RQEFEREGRKLPPKSDSQVFDSNVITPG 53
MNQQRSRRFR++++A + A+E+++ +Q ++ ++ + + +DSNVITPG
Sbjct: 111 MNQQRSRRFRSAQEAKE--ADEKKVEFAKLLRKQNGKKSCEEIVEEVTMKTWDSNVITPG 168
Query: 54 TEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDP 113
T FM +L+ AL+Y++ +LN DP WEK+KVI+SDA VPGEGEHKIM ++R QR+ P +DP
Sbjct: 169 TPFMDILAAALRYWVAYKLNTDPAWEKLKVIISDATVPGEGEHKIMEFIRSQRSCPEHDP 228
Query: 114 NTRHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAK 172
NTRH +YGLDADLIML LATHE HF +LRE V F + C LCGQ GH+A C+G AK
Sbjct: 229 NTRHVIYGLDADLIMLGLATHEPHFRVLREDVFFQESKGRTCHLCGQTGHIAEACKGTAK 288
Query: 173 RKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFF 232
K GEFDEKG + KP+ +LH+ LREYL E +P PF DLE +DD++FMCFF
Sbjct: 289 EKNGEFDEKGKGSSL--KPFIWLHVSVLREYLAVEMHVPQQPFPFDLERALDDWVFMCFF 346
Query: 233 VGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYED 292
VGNDFLPH+P+L+IRE I+ L+A+++ A+GGYLT L R + +Q + ED
Sbjct: 347 VGNDFLPHLPSLDIRENGIDTLIAIWRDNIPAMGGYLTKDGHVDLNRAQLILQGLAKQED 406
Query: 293 RIFQKRARLHQRHAERIKREKAQARRG-------------------DDVEPLAQPDSLVP 333
IF++R + +R KR K + R +++ A P +VP
Sbjct: 407 AIFRRRRQTEERKNANAKRRKEEERVREEERSRKRRRSSPTYGTMRNELSLPAPPPLMVP 466
Query: 334 VSRFHGSRLASGPSPSPYQQSECV--GRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAEN 391
+ + SR + S + L N + ++ + +S + V+AE+
Sbjct: 467 -GKGNLSRAERELTHSMVVNRGAIYKANLANKSAAAAIKSQLLKGASSSNGDLTGVDAED 525
Query: 392 SFETDPQENKEEFKAKLKELLRDKSDAF---------NSDNPEEDKVKLGEPGWKERYYE 442
S + P + K K D N D+ D V+L E G+ +RYYE
Sbjct: 526 SVDGPPDASSPTHLGKRKADALDTGTESETPSIKPQDNDDDLPPDTVRLWEEGYADRYYE 585
Query: 443 EKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQ 502
+KF + E R V Y EGL WV+ YY++G SW W+YPYHYAPFA+D L +
Sbjct: 586 QKFQVHPKDI--EFRHKVARAYVEGLAWVLLYYFQGCPSWTWYYPYHYAPFAADFVGLGK 643
Query: 503 FNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKR 562
NI F G PFKPF QL+GV P+AS+HA+PE + LM+DPNS I DFYP +F +D+NGK+
Sbjct: 644 MNIEFNRGAPFKPFEQLMGVLPAASNHAIPEVFHDLMSDPNSEIIDFYPEEFPIDLNGKK 703
Query: 563 YSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHP----LSASIY 618
++WQG+A LPFIDE RLL ++K H L+ EE RNS D+L V HP L+A+ Y
Sbjct: 704 FAWQGVALLPFIDEKRLLVAMEKRYHLLSSEEHARNSTGRDVLLVSDRHPLYDNLTANFY 763
Query: 619 TLDEHCKQLKIKERV 633
+ + +LK+ RV
Sbjct: 764 SKKQGLSKLKLNMRV 778
>gi|226289075|gb|EEH44587.1| 5'-3' exoribonuclease [Paracoccidioides brasiliensis Pb18]
Length = 1049
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 288/674 (42%), Positives = 400/674 (59%), Gaps = 48/674 (7%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERL-------RQEFEREGRKLPPKSDSQVFDSNVITPG 53
MNQQRSRRFR++++A + A+E+++ +Q ++ ++ + + +DSNVITPG
Sbjct: 111 MNQQRSRRFRSAQEAKE--ADEKKVEFAKLLRKQNGKKSCEEIVEEVTMKTWDSNVITPG 168
Query: 54 TEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDP 113
T FM +L+ AL+Y++ +LN DP WEK+KVI+SDA VPGEGEHKIM ++R QR+ P +DP
Sbjct: 169 TPFMDILAAALRYWVAYKLNTDPAWEKLKVIISDATVPGEGEHKIMEFIRSQRSCPEHDP 228
Query: 114 NTRHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAK 172
NTRH +YGLDADLIML LATHE HF +LRE V F + C LCGQ GH+A C+G AK
Sbjct: 229 NTRHVIYGLDADLIMLGLATHEPHFRVLREDVFFQESKGRTCHLCGQTGHIAEACKGTAK 288
Query: 173 RKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFF 232
K GEFDEKG + KP+ +LH+ LREYL E +P PF DLE +DD++FMCFF
Sbjct: 289 EKNGEFDEKGKGSSL--KPFIWLHVSVLREYLAVEMHVPQQPFPFDLERALDDWVFMCFF 346
Query: 233 VGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYED 292
VGNDFLPH+P+L+IRE I+ L+A+++ A+GGYLT L R + +Q + ED
Sbjct: 347 VGNDFLPHLPSLDIRENGIDTLIAIWRDNIPAMGGYLTKDGHVDLNRAQLILQGLAKQED 406
Query: 293 RIFQKRARLHQRHAERIKREKAQARRG-------------------DDVEPLAQPDSLVP 333
IF++R + +R KR K + R +++ A P +VP
Sbjct: 407 AIFRRRRQTEERKNANAKRRKEEERVREEERSRKRRRSSPTYGTMRNELSLPAPPPLMVP 466
Query: 334 VSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAI-VEAENS 392
+ + SR + S + + + ++ K L ++ G V+AE+S
Sbjct: 467 -GKGNLSRAERELTHSMVVNRGAIYKANLANKSAAAAIKSQLLKGASSNGDLTGVDAEDS 525
Query: 393 FETDPQENKEEFKAKLKELLRDKSDAF---------NSDNPEEDKVKLGEPGWKERYYEE 443
+ P + K K D N D+ D V+L E G+ +RYYE+
Sbjct: 526 VDGPPDASSPTHLGKRKADALDTGTESETPSIKPQDNDDDLPPDTVRLWEEGYADRYYEQ 585
Query: 444 KFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQF 503
KF + E R V Y EGL WV+ YY++G SW W+YPYHYAPFA+D L +
Sbjct: 586 KFQVHPKDI--EFRHKVARAYVEGLAWVLLYYFQGCPSWTWYYPYHYAPFAADFVGLGKM 643
Query: 504 NISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRY 563
NI F G PFKPF QL+GV P+AS+HA+PE + LM+DPNS I DFYP +F +D+NGK++
Sbjct: 644 NIEFNRGAPFKPFEQLMGVLPAASNHAIPEVFHDLMSDPNSEIIDFYPEEFPIDLNGKKF 703
Query: 564 SWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHP----LSASIYT 619
+WQG+A LPFIDE RLL ++K H L+ EE RNS D+L V HP L+A+ Y+
Sbjct: 704 AWQGVALLPFIDEKRLLVAMEKRYHLLSSEEHARNSTGRDVLLVSDRHPLYDNLTANFYS 763
Query: 620 LDEHCKQLKIKERV 633
+ +LK+ RV
Sbjct: 764 KKQGLSKLKLNMRV 777
>gi|328788352|ref|XP_392371.3| PREDICTED: 5'-3' exoribonuclease 2 homolog [Apis mellifera]
Length = 948
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 335/865 (38%), Positives = 460/865 (53%), Gaps = 90/865 (10%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAV 59
MNQQRSRRFRASK+A + E +R+R E +G LPP K + FDSN ITPGT FMA
Sbjct: 111 MNQQRSRRFRASKEANEKINEIKRIRSELSLKGASLPPEKPKEEHFDSNCITPGTPFMAR 170
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
LS L YYIH RLNNDPGW IKVILSDANVPGEGEHKIM ++R QR P +DPNT+H L
Sbjct: 171 LSKCLHYYIHDRLNNDPGWRNIKVILSDANVPGEGEHKIMDFIRRQRAQPDHDPNTQHVL 230
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
G DADLIML LATHE +F+I+RE F P + C +CGQ GH C G + E +
Sbjct: 231 CGADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCDICGQLGHEMQECTGAEPNQREEAN 289
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
G E Y F+ + LREYL+ E ++PN PF+ D E ++DD++FMCFFVGNDFLP
Sbjct: 290 PFGSEC-----QYIFVRLNVLREYLERELQMPNLPFKYDFERVIDDWVFMCFFVGNDFLP 344
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIREGAI+ L+ +YKK GG+LTD +L RV+ + +G ED IF+KR
Sbjct: 345 HLPSLEIREGAIDRLVNLYKKTVYKTGGFLTDSGDVNLDRVQLIMSELGDVEDEIFKKR- 403
Query: 300 RLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGR 359
Q +REK + RR + +P +F +R+ P + E
Sbjct: 404 --QQNELAYKQREKDKKRRLLGIS--NNKPKWIPTGQFAPTRIGEHIKPVQNARYEAYQM 459
Query: 360 LDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAF 419
+G+ + + + +++ ENS TD E K + + + D+S
Sbjct: 460 RIHGQN-----YHTSEKGNAKEMLESMIRPENS--TD-HERKRKSEVVEDDSDDDQS--- 508
Query: 420 NSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGV 479
D+V+L E G+K+RYYE KF+ + R +V L+Y GLCWV+ YYY+G
Sbjct: 509 ------HDEVRLWEDGFKDRYYESKFDVSP--DNLVFRNNVALQYVRGLCWVLRYYYQGC 560
Query: 480 CSWQWFYPYHYAPFASDLKDLDQFNISFELGH-PFKPFNQLLGVFPSASSHALPEHYRKL 538
SW+W++PYHYAPFASD ++ + FE G PF+P QL+GVFP+ASS +P + KL
Sbjct: 561 ASWKWYFPYHYAPFASDFINIGGLSTEFEKGTIPFRPLEQLMGVFPAASSKHVPAPWAKL 620
Query: 539 MTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
M+DP SPI DFYP DF++D+NGK+++WQG+A LPF+DE RL ++ LTE E RN
Sbjct: 621 MSDPKSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALEPYYDCLTEAEKIRN 680
Query: 599 SIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI---SPCA 655
D L+V L + S Y + ++ E + DGM G + C
Sbjct: 681 VRGDDRLYVGLGN----SGYNFMKGLYTNHVRSDAETSICI-----DGMRGTVLLTDDCV 731
Query: 656 GDPHPPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPP---AGVIFPKKIVQLEDLK 712
GD SP+ + I N+V C ++ P + P GV P K+++ +D
Sbjct: 732 GD--GATLPSPINGLLPIRNNKVYCIKFRDPKYSSNFIFPAKKLKGVREPPKVLKPQDF- 788
Query: 713 PAPVLWHEDSGRRPHENGRHNPHGTISGRQ---LGEAAHRLVANSLQHMKVDRNGYGDRM 769
D R N G S Q L EA R++ + H +V
Sbjct: 789 --------DQMNRNTGNTWKPQIGFTSSTQIASLTEAGKRILGHYTNHNRV--------- 831
Query: 770 HGSPLPYAAAPYVPPVPSYQEYGVYDQGYNRFSQPRTDSYPAGHSQSSISAAQPPYDGGY 829
P P+P Q +Y Q + S Y GH+Q ++ P+ GY
Sbjct: 832 ---------PPSYNPIPIPQT--LYPQHHGYQSTNYQGGYDPGHNQQAMVPG--PWARGY 878
Query: 830 SQHYASNTSHHPNRRYHPQYDRNSS 854
T H+ ++RY P+Y + ++
Sbjct: 879 G------TPHNYHQRY-PEYQQKNN 896
>gi|390354842|ref|XP_003728421.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 1 [Strongylocentrotus
purpuratus]
Length = 1010
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 312/729 (42%), Positives = 407/729 (55%), Gaps = 68/729 (9%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAV 59
MNQQRSRRFRASK++ D + R+R E G LPP K+ FDSN ITPGTEFM
Sbjct: 111 MNQQRSRRFRASKESRDKRQDIARIRAEIADRGGYLPPPKAKESHFDSNCITPGTEFMFR 170
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
L+ L+YYI RLN+DPGW+ IKVILSDAN PGEGEHKIM Y+R QR P +DPNT HC+
Sbjct: 171 LADCLRYYITERLNSDPGWKDIKVILSDANTPGEGEHKIMDYIRKQRANPDHDPNTHHCM 230
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
G DADLIML LATHEV+F+I+RE F P Q+ C LC Q GH C+G K +A E
Sbjct: 231 CGADADLIMLGLATHEVNFTIIRE-EFKPNQRRACELCNQEGHEMKECQGLPKERANEL- 288
Query: 180 EKGDEVVVPK---KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGND 236
D + VP+ + FL + L+EYL+ E + PF DLE +DD++FMCFFVGND
Sbjct: 289 ---DTIPVPQGAETEFIFLRLNILKEYLEKELWMTGLPFTFDLERAIDDWVFMCFFVGND 345
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLPH+P+LEIREGAI+ L+ +YKK GYLT+ +L RV+ + +G ED IF+
Sbjct: 346 FLPHLPSLEIREGAIDRLIRLYKKAVYKTKGYLTENGVVNLERVQLMMTDLGEAEDEIFK 405
Query: 297 KRAR----LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQ 352
KR QR+ ER KR+++ + + VP + + GPS S Q
Sbjct: 406 KRRTTELGFRQRNKERNKRQRS-----------SNAPAFVPGGVLAPTPITGGPSSSSAQ 454
Query: 353 QSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELL 412
Q LD + R SS +N+ ++ + FK
Sbjct: 455 QI-----LDQRRDA--------RTSS----------RDNANQSAADAMRASFKGGEGRGT 491
Query: 413 RDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVM 472
+ D ++D V+L E GWKERYY KF+ P + R VV Y EGLCWV+
Sbjct: 492 KRGHGEEEEDEDKDDTVRLWEDGWKERYYRNKFD--VPSSDHDFRAKVVACYVEGLCWVL 549
Query: 473 HYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHAL 531
YYY+G SW+W++PYHYAPFASD D+ FE G PF P QL+ VFP+AS + L
Sbjct: 550 RYYYQGCASWKWYFPYHYAPFASDFLDIKDLPNDFEKGTEPFHPLEQLMSVFPAASGNFL 609
Query: 532 PEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLT 591
P+ +R+ M D +SPI D YP DF++D+NGK+Y+WQG+A LPF+DE RLL + + LT
Sbjct: 610 PDSWREKMVDIDSPIIDLYPDDFQIDLNGKKYAWQGVALLPFVDEHRLLTTLAGVYDNLT 669
Query: 592 EEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI 651
E +RNS D LFV HPL Y + E+ E + P L+ G+ G I
Sbjct: 670 PIEKKRNSNGPDRLFVGKHHPL----YNFIRELYETNSLEQAEPDTDMCPSLAHGVRGKI 725
Query: 652 S-----PCAGDPHPPVFRSPVASMEDIMGNQVLCAIYKLP----DAHKHVTRPPAGVIFP 702
G PH +SPV + DI + VL ++ P D R P G P
Sbjct: 726 GNDEFVTLPGRPH----KSPVPLLRDIPESYVLGVTFRDPSYPADFIFEAKRLP-GAKVP 780
Query: 703 KKIVQLEDL 711
K+++ ED
Sbjct: 781 DKVLKPEDF 789
>gi|390354844|ref|XP_795068.3| PREDICTED: 5'-3' exoribonuclease 2 isoform 2 [Strongylocentrotus
purpuratus]
Length = 999
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 312/729 (42%), Positives = 407/729 (55%), Gaps = 68/729 (9%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAV 59
MNQQRSRRFRASK++ D + R+R E G LPP K+ FDSN ITPGTEFM
Sbjct: 111 MNQQRSRRFRASKESRDKRQDIARIRAEIADRGGYLPPPKAKESHFDSNCITPGTEFMFR 170
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
L+ L+YYI RLN+DPGW+ IKVILSDAN PGEGEHKIM Y+R QR P +DPNT HC+
Sbjct: 171 LADCLRYYITERLNSDPGWKDIKVILSDANTPGEGEHKIMDYIRKQRANPDHDPNTHHCM 230
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
G DADLIML LATHEV+F+I+RE F P Q+ C LC Q GH C+G K +A E
Sbjct: 231 CGADADLIMLGLATHEVNFTIIRE-EFKPNQRRACELCNQEGHEMKECQGLPKERANEL- 288
Query: 180 EKGDEVVVPK---KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGND 236
D + VP+ + FL + L+EYL+ E + PF DLE +DD++FMCFFVGND
Sbjct: 289 ---DTIPVPQGAETEFIFLRLNILKEYLEKELWMTGLPFTFDLERAIDDWVFMCFFVGND 345
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLPH+P+LEIREGAI+ L+ +YKK GYLT+ +L RV+ + +G ED IF+
Sbjct: 346 FLPHLPSLEIREGAIDRLIRLYKKAVYKTKGYLTENGVVNLERVQLMMTDLGEAEDEIFK 405
Query: 297 KRAR----LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQ 352
KR QR+ ER KR+++ + + VP + + GPS S Q
Sbjct: 406 KRRTTELGFRQRNKERNKRQRS-----------SNAPAFVPGGVLAPTPITGGPSSSSAQ 454
Query: 353 QSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELL 412
Q LD + R SS +N+ ++ + FK
Sbjct: 455 QI-----LDQRRDA--------RTSS----------RDNANQSAADAMRASFKGGEGRGT 491
Query: 413 RDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVM 472
+ D ++D V+L E GWKERYY KF+ P + R VV Y EGLCWV+
Sbjct: 492 KRGHGEEEEDEDKDDTVRLWEDGWKERYYRNKFD--VPSSDHDFRAKVVACYVEGLCWVL 549
Query: 473 HYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHAL 531
YYY+G SW+W++PYHYAPFASD D+ FE G PF P QL+ VFP+AS + L
Sbjct: 550 RYYYQGCASWKWYFPYHYAPFASDFLDIKDLPNDFEKGTEPFHPLEQLMSVFPAASGNFL 609
Query: 532 PEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLT 591
P+ +R+ M D +SPI D YP DF++D+NGK+Y+WQG+A LPF+DE RLL + + LT
Sbjct: 610 PDSWREKMVDIDSPIIDLYPDDFQIDLNGKKYAWQGVALLPFVDEHRLLTTLAGVYDNLT 669
Query: 592 EEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI 651
E +RNS D LFV HPL Y + E+ E + P L+ G+ G I
Sbjct: 670 PIEKKRNSNGPDRLFVGKHHPL----YNFIRELYETNSLEQAEPDTDMCPSLAHGVRGKI 725
Query: 652 S-----PCAGDPHPPVFRSPVASMEDIMGNQVLCAIYKLP----DAHKHVTRPPAGVIFP 702
G PH +SPV + DI + VL ++ P D R P G P
Sbjct: 726 GNDEFVTLPGRPH----KSPVPLLRDIPESYVLGVTFRDPSYPADFIFEAKRLP-GAKVP 780
Query: 703 KKIVQLEDL 711
K+++ ED
Sbjct: 781 DKVLKPEDF 789
>gi|119495190|ref|XP_001264385.1| 5'->3' exoribonculease Dhp1 [Neosartorya fischeri NRRL 181]
gi|119412547|gb|EAW22488.1| 5'->3' exoribonculease Dhp1 [Neosartorya fischeri NRRL 181]
Length = 1057
Score = 520 bits (1340), Expect = e-144, Method: Compositional matrix adjust.
Identities = 303/766 (39%), Positives = 437/766 (57%), Gaps = 79/766 (10%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFERE-GRKLPPKSDSQV----FDSNVITPGTE 55
MNQQR+RRFR++++A ++ ++E R+ ++ G K+ + +V +DSNVITPGT
Sbjct: 111 MNQQRARRFRSAQEAKEADEKKEEFRKMLAKQNGNKVDEELQEEVVKKTWDSNVITPGTP 170
Query: 56 FMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNT 115
FM +L+ +L+Y+I +LN DP WEK+K+I+SDA VPGEGEHKIM ++R QR P +DPNT
Sbjct: 171 FMDILAASLRYWIAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFIRSQRAAPEHDPNT 230
Query: 116 RHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRK 174
RH +YGLDADLIML LATHE HF +LRE V F + C LCGQ GH A C G+AK K
Sbjct: 231 RHVIYGLDADLIMLGLATHEPHFRVLREDVFFQESRARTCHLCGQQGHKAEECRGQAKEK 290
Query: 175 AGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVG 234
GEFDEK + KP+ +LH+ LREYL E +P F DLE +DD++FMCFFVG
Sbjct: 291 NGEFDEKQKGSSL--KPFIWLHVSILREYLAAELYVPQQSFPFDLERALDDWVFMCFFVG 348
Query: 235 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI 294
NDFLPH+P+L+IRE I+ L+A+++ +GGYLT+ L+R + +Q + ED I
Sbjct: 349 NDFLPHLPSLDIRENGIDTLIAIWRDNIPVMGGYLTEDGHVDLKRAQLILQGLAKQEDAI 408
Query: 295 FQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDS---LVPVSRFHGSRLASGPSPSPY 351
F++R + +R KR K +A+ ++ + S P+ G R G +P
Sbjct: 409 FRRRRQAEERKLANEKRRKQEAKAREEERARKRRRSSPTYEPMDSPVGHRAPRGGDAAPP 468
Query: 352 QQSECV--GRLDNGKGTSGRPHK------------VPRLSSGATIGAAIVEAENSFETDP 397
Q E + GR + + T H + S+ A + + +++ S + D
Sbjct: 469 NQLELITPGRGELSRQTRELTHSMVVNRGAVYRANMANKSAAAVLKSKLMQGSQSGQ-DG 527
Query: 398 QENKEEFKAKLKELLRDKSDAFNSDNP-----------EE-------------------- 426
+E EE + E +D++D +P EE
Sbjct: 528 EEKSEEATSNNDEPSQDQTDLTEQTSPSVLGKRKADLVEEDTEAGTPGRDSPAVPVAAKE 587
Query: 427 -----DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCS 481
D V+L E G+ +RYYE+KF P+++ E R V Y EGL WV+ YY++G S
Sbjct: 588 DELPPDTVRLWEEGYADRYYEQKFGVD-PQDK-EFRHKVARAYAEGLAWVLLYYFQGCPS 645
Query: 482 WQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTD 541
W W+YPYHYAPFA+D D+ I+F+ G PFKPF QL+GV P++S+HA+PE + LM++
Sbjct: 646 WTWYYPYHYAPFAADFVDIGDMEINFDKGVPFKPFEQLMGVLPASSNHAIPEVFHDLMSN 705
Query: 542 PNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIM 601
P S I DFYP DF VD+NGK+++WQG+ LPFIDE RLL ++K LTE+E RNS+
Sbjct: 706 PESEIIDFYPEDFAVDLNGKKFAWQGVILLPFIDEKRLLAAMEKKYPLLTEDEKLRNSVG 765
Query: 602 ADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPC-AGDPHP 660
++L + +HPL + K++ K +LN +SDG+ G + A PH
Sbjct: 766 REVLLLSEAHPLYQDL------VANFYSKKQAVQKYKLNMRISDGLAGKVERNEAYIPHS 819
Query: 661 PVFRS----PVASMEDIMGNQVLCAIYKLPDA-HKHVTRPPAGVIF 701
+ S + S+ED ++ L Y++P + H H + GV F
Sbjct: 820 SLPSSLEEYGMPSLED---DRSLTVNYEIPKSKHVHKSMLLRGVKF 862
>gi|380025877|ref|XP_003696690.1| PREDICTED: 5'-3' exoribonuclease 2 homolog [Apis florea]
Length = 948
Score = 520 bits (1338), Expect = e-144, Method: Compositional matrix adjust.
Identities = 331/862 (38%), Positives = 461/862 (53%), Gaps = 84/862 (9%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAV 59
MNQQRSRRFRASK+A++ E +R+R E +G LPP K + FDSN ITPGT FMA
Sbjct: 111 MNQQRSRRFRASKEASEKINEIKRIRSELSLKGASLPPEKPKEEHFDSNCITPGTPFMAR 170
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
LS L YYIH RLNNDPGW IKVILSDANVPGEGEHKIM ++R QR P +DPNT+H L
Sbjct: 171 LSKCLHYYIHDRLNNDPGWRNIKVILSDANVPGEGEHKIMDFIRRQRAQPDHDPNTQHVL 230
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
G DADLIML LATHE +F+I+RE F P + C +CGQ GH C G + E +
Sbjct: 231 CGADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCDICGQLGHEMQECTGAEPNQREEAN 289
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
G E Y F+ + LREYL+ E ++PN PF+ D E ++DD++FMCFFVGNDFLP
Sbjct: 290 TFGSEC-----QYIFVRLNVLREYLERELQMPNLPFKYDFERVIDDWVFMCFFVGNDFLP 344
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIREGAI+ L+ +YKK GG+LTD +L RV+ + +G ED IF+KR
Sbjct: 345 HLPSLEIREGAIDRLVNLYKKTVYKTGGFLTDSGDVNLDRVQLIMSELGDVEDEIFKKR- 403
Query: 300 RLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGR 359
Q +REK + RR + +P +F R+ P + E
Sbjct: 404 --QQNELAYKQREKDKKRRLLGIS--NNKPKWIPTGQFAPMRIGEHIKPVQNARYEAYQM 459
Query: 360 LDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAF 419
+G+ + + + +++ ENS TD + ++ E+L +
Sbjct: 460 RVHGQN-----YHTNEKGNAKEMLESMIRPENS--TDHERKRKS------EVL----EDD 502
Query: 420 NSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGV 479
+ D+ D+V+L E G+K+RYYE KF+ + R +V L+Y GLCWV+ YYY+G
Sbjct: 503 SDDDQSHDEVRLWEDGFKDRYYESKFDVSP--DNLAFRNNVALQYVRGLCWVLRYYYQGC 560
Query: 480 CSWQWFYPYHYAPFASDLKDLDQFNISFELGH-PFKPFNQLLGVFPSASSHALPEHYRKL 538
SW+W++PYHYAPFASD ++ + FE G PF+P QL+GVFP+ASS +P + KL
Sbjct: 561 ASWKWYFPYHYAPFASDFINIGGLSTEFEKGTIPFRPLEQLMGVFPAASSKHVPAPWAKL 620
Query: 539 MTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
M+DP SPI DFYP DF++D+NGK+++WQG+A LPF+DE RL ++ LTE E RN
Sbjct: 621 MSDPKSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALEPYYDCLTEAEKIRN 680
Query: 599 SIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI---SPCA 655
D L+V L + S Y + ++ E + DGM G + C
Sbjct: 681 VRGDDRLYVGLGN----SGYNFMKGLYTNHVRSDAETSICI-----DGMRGTVLLTEDCV 731
Query: 656 GDPHPPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPP---AGVIFPKKIVQLEDLK 712
GD SP+ + I N+V C ++ P + P GV P K+++ +D
Sbjct: 732 GD--GATLPSPINGLLPIRNNKVYCIKFRDPKYSSNFIFPAKKLKGVREPPKVLKPQDFD 789
Query: 713 PAPVLWHEDSGRRPHENGRHNPHGTISGRQLGEAAHRLVANSLQHMKVDRNGYGDRMHGS 772
+ ++G P I+ L EA R++ + H +V
Sbjct: 790 QM----NRNTGNTWKPQIGFTPSTQIAS--LTEAGKRILGHYTNHNRV------------ 831
Query: 773 PLPYAAAPYVPPVPSYQEYGVYDQGYNRFSQPRTDSYPAGHSQSSISAAQPPYDGGYSQH 832
P P+P Q + GY S Y GH+Q + P+ GY
Sbjct: 832 ------PPSYNPIPIPQTLYSHHHGYQ--STNYQGGYDPGHNQLGMVPG--PWARGYG-- 879
Query: 833 YASNTSHHPNRRYHPQYDRNSS 854
T H+ ++RY P+Y + ++
Sbjct: 880 ----TPHNYHQRY-PEYQQKNN 896
>gi|336271881|ref|XP_003350698.1| hypothetical protein SMAC_02370 [Sordaria macrospora k-hell]
gi|380094860|emb|CCC07362.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 955
Score = 520 bits (1338), Expect = e-144, Method: Compositional matrix adjust.
Identities = 307/766 (40%), Positives = 419/766 (54%), Gaps = 71/766 (9%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSD------SQVFDSNVITPGT 54
MNQQRSRRFRA+++A + ++++ + +++ + + + + FDSN ITPGT
Sbjct: 102 MNQQRSRRFRAAREAMEKEEDKQKFVELLKKQNGNMIQQEEPVETVVKKAFDSNSITPGT 161
Query: 55 EFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPN 114
FM +L+ +L+Y+ +LN DP W +KVI+SDA VPGEGEHKIM +VR QR P +DPN
Sbjct: 162 PFMDILAASLKYWCSYKLNTDPAWANMKVIISDATVPGEGEHKIMEFVRSQRGSPNHDPN 221
Query: 115 TRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKR 173
TRH +YGLDADLIML LATHE HF +LRE VF + + C +CGQ GH A NC+G+AK
Sbjct: 222 TRHVIYGLDADLIMLGLATHEPHFRVLREDVFAQDSRPRLCKICGQKGHDAMNCKGEAKE 281
Query: 174 KAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFV 233
K GEFDEK + V+P KP+ +LH+ LREYL E +P PF+ +LE +DD++FMCFFV
Sbjct: 282 KNGEFDEK--DAVIPLKPFIWLHVSILREYLAIELDVPGLPFQFNLERAIDDWVFMCFFV 339
Query: 234 GNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDR 293
GNDFLPH+P LEIRE I+ L A++K +GGYLT + L RV++ + + ED
Sbjct: 340 GNDFLPHLPALEIRENGIDTLTAIWKDNLPVMGGYLTKDGQADLERVQYIMAGLAKQEDA 399
Query: 294 IFQKRARLHQRHAERIKREK----AQARRGDDVEPLAQP--DSLVPVS-RFHGSRLASGP 346
IF++R R KR K A+ RR + Q +S P FH G
Sbjct: 400 IFRRRKEAEDRREAGFKRRKLADEARQRRAQGSRQIRQAAENSGPPAGFSFHKINEFPGK 459
Query: 347 SPSPYQQSECV--------GRLDNGKGTSGRPHKVPRL----SSGATIGAAIVEAENSFE 394
P P + V + N S ++ L S GA E
Sbjct: 460 VPQPSITHDMVVNRQAVDQANVANKSAASVLKDQLKSLMAQGKSAPETGAESTETPADTA 519
Query: 395 TDPQENKEE--------FKAKLKELLRDK-----------SDAFNSDNPEEDKVKLGEPG 435
P+ E + EL+ D ++ +D D V+L E G
Sbjct: 520 AAPEAAATEEQAAPPTALGKRKAELIEDAATGPEASSSEVTEVSENDAEPNDSVRLWEEG 579
Query: 436 WKERYYEEKFNAKTPEEREETRKDVVLR------YTEGLCWVMHYYYEGVCSWQWFYPYH 489
+ +RYYE+KF RKD+ R Y EGL WV+ YY++G SW+WFYPYH
Sbjct: 580 YADRYYEQKFKVD--------RKDIDFRHKVGRAYAEGLAWVLEYYFQGCPSWEWFYPYH 631
Query: 490 YAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDF 549
YAPFA+D DL + I FE G +PF QL+ V P+AS HA+PE + LMT+ NS I DF
Sbjct: 632 YAPFAADFVDLGKMEIKFEKGRISRPFEQLMSVLPAASRHAIPEVFHPLMTEENSEIIDF 691
Query: 550 YPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLL 609
YP +FE+D+NGK+ +WQG+A LPFID RLL ++ H L+ E+ RN+ D L +
Sbjct: 692 YPEEFEIDLNGKKMAWQGVALLPFIDMPRLLSAMETKTHLLSPEDQLRNTPGKDFLLLSD 751
Query: 610 SHPLSASIYTLDEHC-KQLKIKERVEVKERLNPELSDGMNGYISPCAG-DPH-PPVFRSP 666
SHP TL EH Q K++ K L+P S G++G + G PH V+
Sbjct: 752 SHP------TLYEHITSQFYSKKQGATKFELDPTKSAGLSGSVEKIDGYVPHGSLVYPLS 805
Query: 667 VASMEDIMGNQVLCAIYKLPD-AHKHVTRPPAGVIFPKKIVQLEDL 711
ASM D+ ++ L Y PD +H H + GV P + D+
Sbjct: 806 RASMPDVDYDRSLMVYYFFPDCSHTHKSMLLRGVQMPTPALTRSDI 851
>gi|350410980|ref|XP_003489200.1| PREDICTED: 5'-3' exoribonuclease 2 homolog [Bombus impatiens]
Length = 947
Score = 519 bits (1337), Expect = e-144, Method: Compositional matrix adjust.
Identities = 330/860 (38%), Positives = 458/860 (53%), Gaps = 95/860 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAV 59
MNQQRSRRFRASK+A++ E +R+R E +G LPP K FDSN ITPGT FMA
Sbjct: 111 MNQQRSRRFRASKEASEKVNEIKRIRSELTLKGASLPPEKPKEDHFDSNCITPGTPFMAR 170
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
LS L YYIH RLNNDPGW IKVILSDANVPGEGEHKIM ++R QR P +DPNT+H L
Sbjct: 171 LSQCLHYYIHDRLNNDPGWRNIKVILSDANVPGEGEHKIMDFIRKQRAQPDHDPNTQHVL 230
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
G DADLIML LATHE +F+I+RE F P + C +CGQ GH C G + E +
Sbjct: 231 CGADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCDICGQLGHEMQECTGAEVNQGDETN 289
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
G E Y F+ + LREYL+ E ++PN PF+ D E ++DD++FMCFFVGNDFLP
Sbjct: 290 TFGSEC-----QYIFVRLNVLREYLERELQMPNLPFKYDFERVIDDWVFMCFFVGNDFLP 344
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIREGAI+ L+ +YKK GG+LTD +L RV+ + +G ED IF+KR
Sbjct: 345 HLPSLEIREGAIDRLVNLYKKAVYKTGGFLTDSGDVNLDRVQLIMSELGDVEDEIFKKRQ 404
Query: 300 RLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGR 359
+ +R K +K + + +P +P +F +R+ SP + E
Sbjct: 405 QNELAFKQREKDKKKLSLGIGNNKP-----KWIPTGQFAPTRIGEHVSPVQNARYEAYQM 459
Query: 360 LDNGKG--TSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSD 417
G+ TSG+ S + +++ ENS + K K R+ ++
Sbjct: 460 RVCGQNYHTSGK-------RSSQEMLESMMRPENS-------TNQVMKRK-----RESAE 500
Query: 418 AFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYE 477
+ D+ D+V+L E G+K+RYYE KF+ + R +V L+Y GLCWV+ YYY+
Sbjct: 501 DDSDDDQVHDEVRLWEDGFKDRYYESKFDVSP--DNLAFRNNVALQYVRGLCWVLRYYYQ 558
Query: 478 GVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYR 536
G SW+W++PYHYAPFASD ++ + FE G PF+P QL+GVFP+ASS +P +
Sbjct: 559 GCASWKWYFPYHYAPFASDFINIGGLSTEFEKGTTPFRPLEQLMGVFPAASSKHIPAPWA 618
Query: 537 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 596
KLM +P SPI DFYP DF++D+NGK+++WQGIA LPF+DE RL ++ LTE E +
Sbjct: 619 KLMINPRSPIIDFYPEDFKIDLNGKKFAWQGIALLPFVDEKRLFKALEPYYDCLTEAEKK 678
Query: 597 RNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI---SP 653
RN + L+V L + I L + + ++ + D M G +
Sbjct: 679 RNVQGDNRLYVGLGNSGYNFIKGLYTNHVLFDAETQICI---------DNMRGMVLLADD 729
Query: 654 CAGDPHPPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPP---AGVIFPKKIVQLED 710
C GD SP+ + + N+V CA ++ P P GV P ++++ +D
Sbjct: 730 CVGD--GATLPSPINGLP-VRNNKVYCARFRDPKYSSSFIFPARKLKGVREPPRVLKPQD 786
Query: 711 L-----------KP-------APVLWHEDSGRR-----PHENGRHNPHGTISGRQLGEAA 747
KP V+ D+GRR + NG P+ +S Q A
Sbjct: 787 FDHMNRNTGNTWKPKIGFIPAMEVVTLNDAGRRILRHYTNYNGVSPPYNPVSIPQSLYPA 846
Query: 748 HRLVANSLQHMKVDRNGYGDRMHGSPLPYAAAPYVPPVPS---YQEYGVYDQ-------- 796
H + D G S P P+ + YQ+Y Y Q
Sbjct: 847 HH------GYRSTDYQGRYQNAGSSQFPMMPGPWARGYGTPHNYQQYSEYQQRNNYSGQQ 900
Query: 797 -GYNRFSQPRTDSYPAGHSQ 815
G N + P+ +SY + ++Q
Sbjct: 901 YGRNNYHNPQYNSYGSQYNQ 920
>gi|358372009|dbj|GAA88615.1| 5'->3' exoribonculease Dhp1 [Aspergillus kawachii IFO 4308]
Length = 1045
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 293/692 (42%), Positives = 421/692 (60%), Gaps = 63/692 (9%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFERE-GRKLPPKSDSQV----FDSNVITPGTE 55
MNQQR+RRFR++++A ++ ++E R+ ER+ G+K QV +DSNVITPGT
Sbjct: 111 MNQQRARRFRSAQEAREADEKKEEFRKMLERQNGKKEDEDMQEQVIQKTWDSNVITPGTP 170
Query: 56 FMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNT 115
FM +L+ AL+Y+I +LN DP WEK+K+I+SDA VPGEGEHKIM +VR QR P +DPNT
Sbjct: 171 FMDILAAALRYWIAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFVRSQRASPEHDPNT 230
Query: 116 RHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRK 174
RH +YGLDADLIML LATHE +F +LRE V F + C LCGQ GH A C+G+AK K
Sbjct: 231 RHVIYGLDADLIMLGLATHEPYFRVLREDVFFQESRARTCRLCGQAGHKAEECKGQAKEK 290
Query: 175 AGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVG 234
G+FDEKG + KP+ +L++ LREYL E +P PF DLE +DD++FMCFFVG
Sbjct: 291 NGQFDEKGKGTSL--KPFIWLNVSILREYLAAELYVPQQPFPFDLERALDDWVFMCFFVG 348
Query: 235 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI 294
NDFLPH+P+L+IRE I+ L+A+++ +GGYLT+ L+R + +Q + ED I
Sbjct: 349 NDFLPHLPSLDIRENGIDTLIAIWRDNIPVMGGYLTEDGHVDLKRAQLILQGLAKQEDAI 408
Query: 295 FQKRARLHQRHA--ERIKREKAQARR---------GDDVEPLAQPDSLVPVSRFHGSRLA 343
F++R + +R A E+ ++++AQAR + E P R G+ A
Sbjct: 409 FRRRRQAEERRAANEKRRKQEAQAREEGARKRRKSSPNYEAYETPAGNPTGGRSKGAADA 468
Query: 344 SGP------SPSPYQQSECVGRLDNGKGTS-GRPHK--VPRLSSGATIGAAIVE------ 388
+ P +P + + +L + T+ G +K + S+ A + + +++
Sbjct: 469 APPNAVELITPQRGELTREARQLTHSMVTNRGAVYKANMANKSAAAILKSKLMKGSEAEE 528
Query: 389 -AENSFET-----DPQENKEEFKAKLKELLRDKSD---------------AFNSDNPE-- 425
+EN+ E+ +P E K E + L + K+D A +S N E
Sbjct: 529 PSENTEESGSEAPEPSEEKTEEQTSPSVLGKRKADEVAEEAATTPTKKPSAGDSQNDELP 588
Query: 426 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 485
D V+L E G+ +RYYE+KF PE++ E R V Y EGL WV+ YY++G SW W+
Sbjct: 589 PDTVRLWEEGYADRYYEQKFGVD-PEDK-EFRHKVARAYAEGLAWVLRYYFQGCPSWTWY 646
Query: 486 YPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 545
YPYHYAPFA+D D+ + + FE G PFKPF QL+GV P++S+HA+PE + LM+DP+S
Sbjct: 647 YPYHYAPFAADFVDIGEMELQFEKGTPFKPFEQLMGVLPASSNHAIPEVFHDLMSDPDSE 706
Query: 546 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 605
I DFYP DF VD+NGK+++WQG+ LPFIDE RLL ++K L+++E RN + D+L
Sbjct: 707 IIDFYPEDFPVDLNGKKFAWQGVVLLPFIDEKRLLAAMEKKYPLLSDDEKLRNCVGRDVL 766
Query: 606 FVLLSHP----LSASIYTLDEHCKQLKIKERV 633
+ SHP L A+ Y+ + + I +R+
Sbjct: 767 LISESHPLYHDLVANFYSKKQGAPKYSINQRI 798
>gi|259016407|sp|Q60SG7.2|XRN2_CAEBR RecName: Full=5'-3' exoribonuclease 2 homolog
Length = 976
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 312/748 (41%), Positives = 423/748 (56%), Gaps = 47/748 (6%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQV---FDSNVITPGTEFM 57
MNQQRSRRFRASK+ A+ AA E R+ EG +P K + FDSN ITPGT FM
Sbjct: 111 MNQQRSRRFRASKEMAEKAASIEEQRRRLIAEGIAVPQKKKDEEEAHFDSNCITPGTPFM 170
Query: 58 AVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRH 117
A L+ AL+YYIH R+ NDP W I++ILSDANVPGEGEHKIM Y+R QR P +DPNT H
Sbjct: 171 ARLADALRYYIHDRVTNDPAWANIEIILSDANVPGEGEHKIMDYIRKQRGNPAHDPNTVH 230
Query: 118 CLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGE 177
CL G DADLIML +ATHE +F+I+RE F P Q C LCGQ GH C G A
Sbjct: 231 CLCGADADLIMLGIATHEANFNIIRE-EFVPNQPRACELCGQYGHELKECRG-----AEN 284
Query: 178 FDEKGDEVVVP---KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVG 234
+ GDE P +K + FL I LREYL+ E +PN PF+ +LE +DD++F+CFFVG
Sbjct: 285 DTDLGDEYCKPEQREKNFIFLRIPVLREYLEKEMAMPNLPFQFNLERALDDWVFLCFFVG 344
Query: 235 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI 294
NDFLPH+P+LEIREGAI+ L+ +YK+ + GYLT P L RVE ++ +G ED I
Sbjct: 345 NDFLPHLPSLEIREGAIDRLIKLYKEMVYEMKGYLTKDGIPELDRVEMIMRGLGKVEDEI 404
Query: 295 FQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQS 354
F++R + +R E K +KA+ ++ P + S P +P S
Sbjct: 405 FKRRQQDEERFKENQKNKKARMQQYGRGRGGRGRGRGQPA--YVPSHGILAPMSAPMHHS 462
Query: 355 ECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRD 414
G + R + ++ A + +++ E A+ +
Sbjct: 463 ---GESTRQMASDARQAAMQFNATNDANAQAAANLKALLNVKGEQSPAEVAAQESRKRKA 519
Query: 415 KSDAFNSDNPEE--DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVM 472
+ +D EE D ++L E GWKERYY KF+ + + + R V Y EGLCWV+
Sbjct: 520 EQPIIITDEDEEPKDDIRLYESGWKERYYRAKFDVGS--DDVDFRHRVAWAYVEGLCWVL 577
Query: 473 HYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFEL-GHPFKPFNQLLGVFPSASSHAL 531
YYY+G SW W++PYHYAPFASD + + +F F PF P QL+ VFP+AS L
Sbjct: 578 RYYYQGCSSWDWYFPYHYAPFASDFETVGEFKPDFTRPTKPFNPLEQLMSVFPAASKQHL 637
Query: 532 PEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLT 591
P ++KLMT+ SPI D YP DF +D+NGK+Y+WQG+A LPF+DE RLL+ +K + TLT
Sbjct: 638 PVEWQKLMTEDESPIIDLYPADFRIDLNGKKYAWQGVALLPFVDEQRLLETLKSVYPTLT 697
Query: 592 EEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI 651
+EE RN+ + +F+ +H + + + K + V+ L+P L +G++G I
Sbjct: 698 DEEKYRNTRGPNRIFIGRNH----KSFAFFQQVAESKSNDLVD----LDPSLLNGVSGKI 749
Query: 652 S--PCAGDPHPPVFRSPVASME--DIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQ 707
S A P P F SPV+ E D+ N +C +Y+ P+ PA +FP V+
Sbjct: 750 SYDSTATAPGLP-FPSPVSHEECQDLPTNCGICVLYEDPEY-------PANYVFPA--VR 799
Query: 708 LEDLKPA-PVLWHEDSGRRPHENGRHNP 734
L+ K A L ED R +GR NP
Sbjct: 800 LDGAKEAEKTLRPEDWNER--RDGRFNP 825
>gi|115492077|ref|XP_001210666.1| 5'-3' exoribonuclease 2 [Aspergillus terreus NIH2624]
gi|114197526|gb|EAU39226.1| 5'-3' exoribonuclease 2 [Aspergillus terreus NIH2624]
Length = 1022
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 307/769 (39%), Positives = 434/769 (56%), Gaps = 78/769 (10%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLR-----QEFEREGRKLPPKSDSQVFDSNVITPGTE 55
MNQQR+RRFR++++A ++ ++E R Q + + L + + +DSNVITPGT
Sbjct: 111 MNQQRARRFRSAQEAKEADEKKEEFRKLQAKQNGNKADQDLQEEVIQKTWDSNVITPGTP 170
Query: 56 FMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNT 115
FM +L+ +L+Y+I +LN DP WEK+K+I+SDA VPGEGEHKIM +VR QR P +DPNT
Sbjct: 171 FMDILAASLRYWIAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFVRSQRADPEHDPNT 230
Query: 116 RHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRK 174
RH +YGLDADLIML LATHE +F +LRE V F + C LCGQ GH A C G+AK K
Sbjct: 231 RHVIYGLDADLIMLGLATHEPYFRVLREDVFFQESKARTCHLCGQVGHKAEECRGRAKEK 290
Query: 175 AGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVG 234
+GEFDEK + + KP+ +L++ LREYL E +PN PF DLE +DD++FMCFFVG
Sbjct: 291 SGEFDEKQNGTSL--KPFIWLNVSILREYLAVELHVPNQPFPFDLERALDDWVFMCFFVG 348
Query: 235 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI 294
NDFLPH+P+L+IRE I+ L+A+++ +GGYLT ++ + +Q + ED I
Sbjct: 349 NDFLPHLPSLDIRENGIDTLIAIWRDNIPVMGGYLTKDGHVDFKKAQLILQGLAKQEDAI 408
Query: 295 FQKRARLHQRHAERIKREKAQA----------RRG----DDVEPLAQPD----------- 329
F++R ++ +R A KR K +A RRG D EP A
Sbjct: 409 FRRRRQVEERKAANEKRRKQEAQDREERSKRQRRGSPSYDAYEPPANNRSRGGGSGGPAP 468
Query: 330 ----SLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAA 385
L+ +R SR QS V R + L S G+
Sbjct: 469 PSGLELITPARGELSR-----QTRELTQSMVVNRGAVYRANMANKSAAAVLKSKLMKGSQ 523
Query: 386 IVEAENSFETDPQENKEEFKAKLKELLRDKSDAFN-------SDNPEEDK--------VK 430
+E+ E E E+ + L + K+D N S+ P+ +K V+
Sbjct: 524 EDTSEDVEEPSTDEPAEQTSPSV--LGKRKADEPNGGEETPGSETPKPNKDDEMPPDTVR 581
Query: 431 LGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHY 490
L E G+ +RYYE+KF PE++ E R V Y EGL WV+ YY++G SW W+YPYHY
Sbjct: 582 LWEEGYADRYYEQKFGV-DPEDK-EFRHKVARAYAEGLAWVLLYYFQGCPSWTWYYPYHY 639
Query: 491 APFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFY 550
APFA+D D+ SFE G PFKPF QL+GV P++S+HA+PE + LM DP+S I DFY
Sbjct: 640 APFAADFVDIADMIPSFEKGTPFKPFEQLMGVLPASSNHAIPEVFHDLMKDPDSEIIDFY 699
Query: 551 PTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLS 610
P DF VD+NGK+++WQG+ LPFIDE RLL+ ++K L++EE RN + D+L +
Sbjct: 700 PEDFAVDLNGKKFAWQGVVLLPFIDEKRLLNAMEKKYPLLSDEERLRNCVGRDVLLISDR 759
Query: 611 HPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAG-DPHPPVFRSPVAS 669
HPL + K++ K +LN +S+G+ G + PH S V+S
Sbjct: 760 HPLYQDL------VGNFYSKKQGAPKYKLNMRVSEGLAGKVEKDESYIPH----SSLVSS 809
Query: 670 MED-----IMGNQVLCAIYKLP-DAHKHVTRPPAGVIFPKKIVQLEDLK 712
+E+ + ++ L Y++P +H H + GV FP + D++
Sbjct: 810 LEEYGMPTLEEDRSLTVNYEIPKSSHIHKSMLLRGVKFPPPALDQGDIQ 858
>gi|302663765|ref|XP_003023520.1| hypothetical protein TRV_02267 [Trichophyton verrucosum HKI 0517]
gi|291187523|gb|EFE42902.1| hypothetical protein TRV_02267 [Trichophyton verrucosum HKI 0517]
Length = 1037
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 296/704 (42%), Positives = 410/704 (58%), Gaps = 77/704 (10%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEF------EREGRK---LPPKSDSQVFDSNVIT 51
MNQQRSRRFR+++DA AE+E+ + EF ++ G+K + + ++ +D+NVIT
Sbjct: 111 MNQQRSRRFRSAQDAK---AEDEK-KVEFAKLLKKQKRGKKDVTITEEVITKTWDTNVIT 166
Query: 52 PGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGY 111
PGT FM +L++AL+Y++ +L+ DPGWEK+KVI+SDA VPGEGEHKIM ++R QR P Y
Sbjct: 167 PGTPFMDILALALRYWVAYKLSTDPGWEKLKVIISDATVPGEGEHKIMEFIRSQRACPEY 226
Query: 112 DPNTRHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGK 170
DPNTRH +YGLDADLIML L THE HF +LRE V F + C LCGQ GH+ C GK
Sbjct: 227 DPNTRHVIYGLDADLIMLGLGTHEPHFRVLREDVFFQESKARTCKLCGQAGHVEEACTGK 286
Query: 171 AKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMC 230
AK K GEFDEK + P KP+ +LH+ LREYL E ++P PF DLE +DD++FMC
Sbjct: 287 AKEKRGEFDEK--QKGNPLKPFIWLHVSVLREYLAVEMQVPQQPFPFDLERALDDWVFMC 344
Query: 231 FFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSY 290
FFVGNDFLPH+P+LEIRE I+ L+A+++ +GGYLT + L + + +Q +
Sbjct: 345 FFVGNDFLPHLPSLEIRENGIDTLIAIWRDNIPQMGGYLTKDGRVDLAKAQLILQGLAKQ 404
Query: 291 EDRIFQKRARLHQRHAERIK-----------------REKAQARRGDDVEPLAQPDSLVP 333
ED IF++R + +R K R+K + RG EP+ LV
Sbjct: 405 EDAIFRRRRQTEERRNANAKRRQEEDRQRRNNNNDHARKKRRGSRG--AEPVPDIPPLVV 462
Query: 334 VSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSF 393
+ SR + + V R K L + G AE+
Sbjct: 463 PGKGELSR-----AERELTHAMVVNRGAVYKANMANKSAAAALKAQLLSGGT---AEDGV 514
Query: 394 ETDPQENKEEFKAKLKELLRDKSDAFNSDN---------------------PEEDK---- 428
+T ++ +L + KSD F + N P+ED+
Sbjct: 515 DTTNAQDSAPSGMPSSKLGKRKSDVFENSNTEAEAEEEDEEEEDTVEIPAKPKEDEMPPD 574
Query: 429 -VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYP 487
V+L E G+ +RYYE+KF +P++ R V Y EGL WV+ YY++G SW W+YP
Sbjct: 575 TVRLWEDGYADRYYEQKFGV-SPKDI-AFRHKVARAYVEGLSWVLLYYFQGCPSWTWYYP 632
Query: 488 YHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPIS 547
YHYAPFA+D D+ + ++ F G PFKPF QL+GV P+AS+HA+PE +R LM+D NS I
Sbjct: 633 YHYAPFAADFVDIGEMDVQFTKGTPFKPFEQLMGVLPAASNHAIPEVFRDLMSDENSEII 692
Query: 548 DFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
DFYP DF VD+NGK+++WQG+A LPFIDE RLL + K H L+EEE RN++ D+L +
Sbjct: 693 DFYPEDFPVDLNGKKFAWQGVALLPFIDEKRLLAAMDKRYHLLSEEEQARNAMGKDVLLL 752
Query: 608 LLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI 651
HPL S+ K++V K +LN +S+G+ G +
Sbjct: 753 SEKHPLYESL------TANFYSKKQVSSKLKLNMRISEGLGGKV 790
>gi|432092124|gb|ELK24810.1| 5'-3' exoribonuclease 2 [Myotis davidii]
Length = 925
Score = 517 bits (1332), Expect = e-143, Method: Compositional matrix adjust.
Identities = 311/736 (42%), Positives = 419/736 (56%), Gaps = 89/736 (12%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 111 MNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 171 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 231 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDE 289
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 290 LADSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIREGAI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 350 LPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKD 409
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPV----SRFHGSRLASGPSPSPYQQSEC 356
R K ++ + +R +P P ++ SR GS++A+ P + Y+
Sbjct: 410 DEDSFRRRQKEKRKRMKRD---QPAFTPGGILTPHALGSRNSGSQVANNPRQAAYEM--- 463
Query: 357 VGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKS 416
R+ N S P+ SF +D + L + R K+
Sbjct: 464 --RMQNNSSPSVSPN-------------------TSFTSDGS------PSPLGGMKR-KA 495
Query: 417 DAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYY 476
D +S+ ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YYY
Sbjct: 496 DDSDSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYYY 553
Query: 477 EGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHY 535
+G SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP +
Sbjct: 554 QGCASWKWYYPFHYAPFASDFEGIADLPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSW 613
Query: 536 RKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEA 595
RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE
Sbjct: 614 RKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEE- 672
Query: 596 RRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCA 655
+Y Q E V+V PEL G+ G S
Sbjct: 673 --------------------KLY-------QTGSTEPVDVP----PELCHGIQGKFSLDE 701
Query: 656 GDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHVTRPPAGVIFPKKIVQLEDLKP 713
P V SPV + D+ N + +K P A ++ + V+ P KP
Sbjct: 702 EAILPDQVVCSPVPMLRDLTQNTAISINFKDPQFAEDYIFK---AVMLPGA------RKP 752
Query: 714 APVL----WHEDSGRR 725
APVL W + S R
Sbjct: 753 APVLKPGDWEKSSNGR 768
>gi|225560323|gb|EEH08605.1| 5'->3' exoribonculease Dhp1 [Ajellomyces capsulatus G186AR]
Length = 1042
Score = 517 bits (1332), Expect = e-143, Method: Compositional matrix adjust.
Identities = 286/678 (42%), Positives = 393/678 (57%), Gaps = 56/678 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERL-----RQEFEREGRKLPPKSDSQVFDSNVITPGTE 55
MNQQRSRRFR++++A ++ ++E +Q + G L + ++ +DSNVITPGT
Sbjct: 111 MNQQRSRRFRSAQEAKEADEKKEEFAKLLRKQNGSKGGEGLVEEVITKTWDSNVITPGTP 170
Query: 56 FMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNT 115
FM +L+ AL+Y++ +LN DP WEK+K+I+SDA VPGEGEHKIM ++R QR+ +DPNT
Sbjct: 171 FMDILAAALRYWVAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFIRSQRSCAEHDPNT 230
Query: 116 RHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRK 174
RH +YGLDADLIML LATHE HF +LRE V F + C LCGQ GH+A C+G AK K
Sbjct: 231 RHVIYGLDADLIMLGLATHEPHFRVLREDVFFQESKGRTCHLCGQTGHIAEACKGTAKEK 290
Query: 175 AGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVG 234
GEFDEKG P KP+ +LH+ LREYL E +P PF DLE +DD++FMCFFVG
Sbjct: 291 NGEFDEKGKGS--PLKPFIWLHVSVLREYLAVEMHVPQQPFPFDLERALDDWVFMCFFVG 348
Query: 235 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI 294
NDFLPH+P+L+IRE I+ L+A+++ A+ GYLT L R + +Q + ED I
Sbjct: 349 NDFLPHLPSLDIRENGIDTLIAIWRDNIPAMNGYLTKDGHVDLDRAQLILQGLAKQEDAI 408
Query: 295 FQKRARLHQRHAERIKREKAQARR----------------------GDDVEPLAQPDSLV 332
F++R + +R KR K + R G L P +V
Sbjct: 409 FRRRRQTEERKNANAKRRKQEERYREEERSREEERSRKKRRSSPNYGSMENELVPPPLIV 468
Query: 333 PVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENS 392
P + H SR + S V + + ++ K + G++ A E+S
Sbjct: 469 P-GKGHISRADRELTHSMVVNRGAVYKANMANKSAAAVLKSQLIKGGSSGDAVTAGVEDS 527
Query: 393 FETDPQENKEEFKAKLKELLRDKSDAFNSDNPEE-------------DKVKLGEPGWKER 439
+ N F L + K+DA ++ E D V+L E G+ +R
Sbjct: 528 VDGT-VNNTSPFS-----LGKRKADALETETESETPKKPDDTDELPPDTVRLWEDGYADR 581
Query: 440 YYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKD 499
YYE+KF+ + E R V Y EGL WV+ YY++G SW W+YPYHYAPFA+D D
Sbjct: 582 YYEQKFHVDPKDI--EFRHKVARAYVEGLAWVLLYYFQGCPSWTWYYPYHYAPFAADFVD 639
Query: 500 LDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMN 559
L I F G PFKPF QL+GV P+AS+HA+PE + LM+DP S I DFYP DF +D+N
Sbjct: 640 LGNMKIEFNKGAPFKPFEQLMGVLPAASNHAIPEVFHDLMSDPESEIIDFYPEDFPIDLN 699
Query: 560 GKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHP----LSA 615
GK+++WQG+A LPFIDE RLL ++K L+ EE RN+ ++LF+ HP L+A
Sbjct: 700 GKKFAWQGVALLPFIDEKRLLLAMEKRYPLLSNEEHARNTTGREVLFLSDRHPLYENLTA 759
Query: 616 SIYTLDEHCKQLKIKERV 633
+ Y+ + LK+ RV
Sbjct: 760 NFYSKKQLAPTLKLNMRV 777
>gi|145240295|ref|XP_001392794.1| 5'-3' exoribonuclease 2 [Aspergillus niger CBS 513.88]
gi|134077309|emb|CAK45649.1| unnamed protein product [Aspergillus niger]
Length = 1045
Score = 517 bits (1332), Expect = e-143, Method: Compositional matrix adjust.
Identities = 307/780 (39%), Positives = 456/780 (58%), Gaps = 88/780 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDS--------QVFDSNVITP 52
MNQQR+RRFR++++A ++ ++E R+ E++ K K D + +DSNVITP
Sbjct: 111 MNQQRARRFRSAQEAREADEKKEEFRKMLEKQNGK---KEDEDMQEHVIQKTWDSNVITP 167
Query: 53 GTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYD 112
GT FM +L+ AL+Y+I +LN DP WEK+K+I+SDA VPGEGEHKIM +VR QR P +D
Sbjct: 168 GTPFMDILAAALRYWIAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFVRSQRASPEHD 227
Query: 113 PNTRHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKA 171
PNTRH +YGLDADLIML LATHE +F +LRE V F + C LCGQ GH A C+G+A
Sbjct: 228 PNTRHVIYGLDADLIMLGLATHEPYFRVLREDVFFQESRARTCRLCGQAGHKAEECKGQA 287
Query: 172 KRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCF 231
K K G+FDEKG + KP+ +L++ LREYL E +P PF DLE +DD++FMCF
Sbjct: 288 KEKNGQFDEKGKGTSL--KPFIWLNVSILREYLAAELYVPQQPFPFDLERALDDWVFMCF 345
Query: 232 FVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYE 291
FVGNDFLPH+P+L+IRE I+ L+A+++ +GGYLT+ L+R + +Q + E
Sbjct: 346 FVGNDFLPHLPSLDIRENGIDTLIAIWRDNIPVMGGYLTEDGHVDLKRAQLILQGLAKQE 405
Query: 292 DRIFQKRARLHQRHA--ERIKREKAQARR---------GDDVEPLAQPDSLVPVSRFHGS 340
D IF++R + +R A E+ ++++AQAR + E P++ R G+
Sbjct: 406 DAIFRRRRQAEERRAANEKRRKQEAQAREEGARKRRKSSPNYEAYDTPEANPTGGRSKGA 465
Query: 341 RLASGP------SPSPYQQSECVGRLDNGKGTS-GRPHK--VPRLSSGATIGAAIVE--- 388
A+ P +P+ + + +L + T+ G +K + S+ A + + +++
Sbjct: 466 ADAAPPNAVELITPARGELTREARQLTHSMVTNRGAVYKANMANKSAAAILKSKLMKGPE 525
Query: 389 ----AENSFET-----DPQENKEEFKAKLKELLRDKSDAF---------------NSDNP 424
++N+ E+ +P E K E + L + K+DA +S N
Sbjct: 526 AEEPSDNTGESGSEAPEPSEEKTEEQTSPSVLGKRKADAVAEEAATTPTKKPSAGDSQND 585
Query: 425 E--EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSW 482
E D V+L E G+ +RYYE+KF PE++E R V Y EGL WV+ YY++G SW
Sbjct: 586 ELPPDTVRLWEEGYADRYYEQKFGVD-PEDKE-FRHKVARAYAEGLAWVLRYYFQGCPSW 643
Query: 483 QWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDP 542
W+YPYHYAPFA+D D+ + FE G PFKPF QL+GV P++S+HA+PE + LM+DP
Sbjct: 644 TWYYPYHYAPFAADFVDIGDMELQFEKGTPFKPFEQLMGVLPASSNHAIPEVFHDLMSDP 703
Query: 543 NSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMA 602
+S I DFYP DF VD+NGK+++WQG+ LPFIDE RLL ++K L+++E RN +
Sbjct: 704 DSEIIDFYPEDFPVDLNGKKFAWQGVVLLPFIDEKRLLAAMEKKYPLLSDDEKLRNCVGR 763
Query: 603 DMLFVLLSHP----LSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDP 658
D+L + SHP L A+ Y+ + + I +R+ S+G+ G + D
Sbjct: 764 DVLLISESHPLYHDLVANFYSKKQGAPKYSINQRI----------SEGLAGKVE--RNDS 811
Query: 659 HPPVFRSPVASMED-----IMGNQVLCAIYKLPDA-HKHVTRPPAGVIFPKKIVQLEDLK 712
+ P S V+S+E+ + ++ L Y++P + H H + G P + D++
Sbjct: 812 YIP-HSSLVSSLEEYGMPSLDDDRSLTVNYEIPKSKHVHKSMLLRGAKLPPPTLDNADIQ 870
>gi|149041185|gb|EDL95118.1| 5'-3' exoribonuclease 2 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 951
Score = 517 bits (1332), Expect = e-143, Method: Compositional matrix adjust.
Identities = 307/719 (42%), Positives = 415/719 (57%), Gaps = 63/719 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 111 MNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 171 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 231 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCALCNQFGHEVKDCEGLPREKKGKHDE 289
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 290 LADSLPCAEGEFIFLRLNVLREYLERELTMASLPFPFDVERSIDDWVFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIREGAI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 350 LPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRK- 408
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVS----RFHGSRLASGPSPSPYQ-QSE 355
+ R ++++ + R D L P + G ++AS P + Y+ + +
Sbjct: 409 -DDEDSFRRRQKEKRKRMKRDQPAFTPSGILTPYALGSRNSPGCQVASNPRQAAYEMRMQ 467
Query: 356 CVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENS-FETDPQENKEEFKAKLKELLRD 414
TS P + +G +AE+S E +P++N ++A K
Sbjct: 468 SNSSPSISPNTSFASDGSP-----SPLGGLKRKAEDSDSEPEPEDNVRLWEAGWK----- 517
Query: 415 KSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 474
+RYY+ KF+ +E+ R+ VV Y EGLCWV+ Y
Sbjct: 518 -----------------------QRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRY 552
Query: 475 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPE 533
YY+G SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP
Sbjct: 553 YYQGCASWKWYYPFHYAPFASDFEGIADMPSEFEKGTKPFKPLEQLMGVFPAASGNFLPP 612
Query: 534 HYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEE 593
+RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT E
Sbjct: 613 TWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPE 672
Query: 594 EARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISP 653
E RRNS+ +D+LFV HPL I L Q E V+V PEL G+ G S
Sbjct: 673 ENRRNSLGSDVLFVGKVHPLHDFILEL----YQTGSTEPVDVP----PELCHGIQGKFSL 724
Query: 654 CAGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHV--------TRPPAGVIFP 702
P SPV + D+ N + +K P A +V R PA V+ P
Sbjct: 725 DEEAILPDQTVCSPVPMLRDLTQNTAISINFKDPQFAEDYVFKAIMLPGARKPAAVLKP 783
>gi|46138403|ref|XP_390892.1| hypothetical protein FG10716.1 [Gibberella zeae PH-1]
gi|115311956|sp|Q4HWE2.3|XRN2_GIBZE RecName: Full=5'-3' exoribonuclease 2
Length = 980
Score = 517 bits (1331), Expect = e-143, Method: Compositional matrix adjust.
Identities = 304/749 (40%), Positives = 427/749 (57%), Gaps = 56/749 (7%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFERE-GRKLPPKSDSQV----FDSNVITPGTE 55
MNQQRSRRFR++++A + +++ L + +++ G L +S V FDSN ITPGT
Sbjct: 112 MNQQRSRRFRSAQEAQEKEQDKQELIKMLKQQNGGNLSTESLETVTKKAFDSNSITPGTP 171
Query: 56 FMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNT 115
FM +L+++L+Y+ +LN DPGW K+K+I+SDA VPGEGEHKIM++VR QR P +DPNT
Sbjct: 172 FMDILALSLRYWCQYKLNTDPGWAKLKIIISDATVPGEGEHKIMNFVRSQRASPDHDPNT 231
Query: 116 RHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKRK 174
RH +YGLDADLIML LATHE HF +LRE VF Q+ + C +CGQ GH A NC G+ K+K
Sbjct: 232 RHVIYGLDADLIMLGLATHEPHFRVLREDVFFQDQKARLCKICGQKGHDAQNCRGEEKKK 291
Query: 175 AGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVG 234
GE DEK V + KP+ +LH+ LREYL E +PN PF DLE VDD+IFMC FVG
Sbjct: 292 DGEHDEKDKGVAL--KPFIWLHVAVLREYLAVELGVPNLPFRFDLERAVDDWIFMCCFVG 349
Query: 235 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI 294
NDFLPH+P LEIRE I+ L ++K +GGY+T L R + + + ED I
Sbjct: 350 NDFLPHLPALEIREHGIDTLTKIWKDNLPVMGGYVTKDGHIDLERAQVILDGLAQQEDNI 409
Query: 295 FQKRARLHQRHAERIKREKAQ-------ARRGDDVEPLA-----QPDSLVPVSRFHGSRL 342
F++R R KR K Q R+G P P++ +P+
Sbjct: 410 FKRRKEQEDRREANFKRRKLQNEVNGRGGRQGGPSHPKKINGHENPENGLPLQ------- 462
Query: 343 ASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKE 402
A G ++Q+ + N S P S A++ A ++++ S EN E
Sbjct: 463 AVGAYTGRHEQTLTHDMVVN---RSTAPDANVANKSAASVLKAQLQSQKSLSNPKPENPE 519
Query: 403 EFK---------AKLKELLRDKSDAFNSDNPEE-------DKVKLGEPGWKERYYEEKFN 446
+ + ++E DA + P D V+L E G+ +RYYE+KF+
Sbjct: 520 QESPSALGKRKASSIEEGNSSVPDAASVSTPSTSAEEGPVDDVRLWEDGYADRYYEKKFH 579
Query: 447 AKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNIS 506
K P++ E R V Y EGL WV+ YY++G SW+W+YPYHYAPFA+D KD+ + NIS
Sbjct: 580 -KDPKDIE-FRHGVGRAYVEGLAWVLLYYFQGCPSWEWYYPYHYAPFAADFKDIAKMNIS 637
Query: 507 FELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQ 566
FE G KPF QL+ V P+AS HALPE + LM +P S I DFYP DFE+D+NGK+++WQ
Sbjct: 638 FEKGRVSKPFEQLMSVLPAASRHALPEVFHDLMLNPESNIIDFYPEDFEIDLNGKKFAWQ 697
Query: 567 GIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQ 626
G+A LPFI+ RLL V+ L+ ++ RN + D+L H S+Y DE +
Sbjct: 698 GVALLPFIEMPRLLAAVQSKYPELSAADSARNEMGRDVLIFSEGH---ESLY--DEVLTK 752
Query: 627 LKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSPVA--SMEDIMGNQVLCAIYK 684
K++ + K +LNP+ SDG++G + G + P+ SM D+ ++ + Y
Sbjct: 753 FYSKKQGDSKFKLNPKKSDGLSGRVEKKEGYVPHSELKYPLERNSMPDLDYDRSVSVYYD 812
Query: 685 LPDAHK-HVTRPPAGVIFPKKIVQLEDLK 712
P A + H + GV P + D++
Sbjct: 813 FPQASQTHKSMLLRGVQLPTPALTQNDIQ 841
>gi|302509948|ref|XP_003016934.1| hypothetical protein ARB_05228 [Arthroderma benhamiae CBS 112371]
gi|291180504|gb|EFE36289.1| hypothetical protein ARB_05228 [Arthroderma benhamiae CBS 112371]
Length = 1038
Score = 517 bits (1331), Expect = e-143, Method: Compositional matrix adjust.
Identities = 291/702 (41%), Positives = 410/702 (58%), Gaps = 73/702 (10%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEF------EREGRK---LPPKSDSQVFDSNVIT 51
MNQQRSRRFR+++DA AE+E+ + EF ++ G+K + + ++ +D+NVIT
Sbjct: 111 MNQQRSRRFRSAQDAK---AEDEK-KVEFAKLLKKQKRGKKDVTITEEVITKTWDTNVIT 166
Query: 52 PGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGY 111
PGT FM +L++AL+Y++ +L+ DPGWEK+KVI+SDA VPGEGEHKIM ++R QR P Y
Sbjct: 167 PGTPFMDILALALRYWVAYKLSTDPGWEKLKVIISDATVPGEGEHKIMEFIRSQRACPEY 226
Query: 112 DPNTRHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGK 170
DPNTRH +YGLDADLIML L THE HF +LRE V F + C LCGQ GH+ C GK
Sbjct: 227 DPNTRHVIYGLDADLIMLGLGTHEPHFRVLREDVFFQESKARTCKLCGQAGHVEEACTGK 286
Query: 171 AKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMC 230
AK K GEFDEK + P KP+ +LH+ LREYL E ++P PF DLE +DD++FMC
Sbjct: 287 AKEKRGEFDEK--QKGNPLKPFIWLHVSVLREYLAVEMQVPQQPFPFDLERALDDWVFMC 344
Query: 231 FFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSY 290
FFVGNDFLPH+P+LEIRE I+ L+A+++ +GGYLT + L + + +Q +
Sbjct: 345 FFVGNDFLPHLPSLEIRENGIDTLIAIWRDNIPQMGGYLTKDGRVDLAKAQLILQGLAKQ 404
Query: 291 EDRIFQKRARL---------------------HQRHAERIKREKAQARRGDDVEPLAQPD 329
ED IF++R + + HA + +R A D+ PL P
Sbjct: 405 EDAIFRRRRQTEERRNANAKRRQEEDRQRRNNNNDHARKKRRGSRGAEPVPDIPPLVVPG 464
Query: 330 S------------LVPVSR---FHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVP 374
+ V+R + + + + Q G ++G T+ P
Sbjct: 465 KGELSRAERELTHAMVVNRGAVYKANMANKSAAAALKAQLLSGGTAEDGVDTTNAQDSAP 524
Query: 375 RLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDK-----V 429
G+ +G ++D EN +E ++ P+ED+ V
Sbjct: 525 SGIPGSKLGKR--------KSDVFENSNTEAEAEEEDEEEEDTVEVPAKPKEDEMPPDTV 576
Query: 430 KLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYH 489
+L E G+ +RYYE+KF +P++ R V Y EGL WV+ YY++G SW W+YPYH
Sbjct: 577 RLWEDGYADRYYEQKFGV-SPKDI-AFRHKVARAYVEGLSWVLLYYFQGCPSWTWYYPYH 634
Query: 490 YAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDF 549
YAPFA+D D+ + ++ F G PFKPF QL+GV P+AS+HA+PE +R LM+D NS I DF
Sbjct: 635 YAPFAADFVDIGEMDVQFTKGTPFKPFEQLMGVLPAASNHAIPEVFRDLMSDENSEIIDF 694
Query: 550 YPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLL 609
YP DF VD+NGK+++WQG+A LPFIDE RLL + K H L+EEE RN++ D+L +
Sbjct: 695 YPEDFPVDLNGKKFAWQGVALLPFIDEKRLLAAMGKRYHLLSEEEQARNAMGKDVLLLSE 754
Query: 610 SHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI 651
HPL S+ K++V K +LN +S+G+ G +
Sbjct: 755 KHPLYESL------TANFYSKKQVSSKLKLNMRISEGLGGKV 790
>gi|347971217|ref|XP_309641.5| AGAP004090-PA [Anopheles gambiae str. PEST]
gi|333466642|gb|EAA05380.5| AGAP004090-PA [Anopheles gambiae str. PEST]
Length = 1042
Score = 517 bits (1331), Expect = e-143, Method: Compositional matrix adjust.
Identities = 312/756 (41%), Positives = 416/756 (55%), Gaps = 51/756 (6%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAV 59
MNQQRSRRFRASK+ A+ AAE R+R+E +G LPP K FDSN ITPGT FM
Sbjct: 111 MNQQRSRRFRASKETAEKAAEMARIREELAAKGAILPPEKEKGSHFDSNCITPGTPFMDR 170
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
LS LQYY+H R+NN+PGW+ +KVILSDANVPGEGEHKIM Y+R QR P YDPNT H L
Sbjct: 171 LSRCLQYYVHDRMNNNPGWKNLKVILSDANVPGEGEHKIMDYIRKQRVQPDYDPNTHHVL 230
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
G DADLIML LATHE HF+I+RE F P + C +C Q GH +C G + E
Sbjct: 231 CGADADLIMLGLATHETHFTIIREE-FLPNKDRPCDICQQIGHEMKSCTGLQSER--ELA 287
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
+K + + + F+ + L+EYL E +PN PF D E +VDD++FMCFFVGNDFLP
Sbjct: 288 DKPPPMPGKETQFIFVRLNVLKEYLQKELDMPNLPFPYDFERVVDDWVFMCFFVGNDFLP 347
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIRE AI+ L+ +YKK GYLTD L RVE + +G ED IF++R
Sbjct: 348 HLPSLEIRENAIDRLVTLYKKCVYKTRGYLTDSGSVLLDRVEMIMTDLGFAEDEIFRQRK 407
Query: 300 RLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGR 359
R ER KR + Q R +P+ +++ S+ A P Q V
Sbjct: 408 VSEDRFKERNKRMRMQNERQ------RRPN----FEQYNNSQFAPTPLGRGVQPQAVV-- 455
Query: 360 LDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAF 419
N + + L G + NS DP + KA+ + L ++
Sbjct: 456 --NARKEAAH---FRMLGQGGNDNERVAAGNNS-ANDPSPRGTKRKAE-EPLAVTVTEDE 508
Query: 420 NSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGV 479
+ P D+V+L E G+K+RYYE KF+ + + R+ V Y GLCWV+ YYY+G
Sbjct: 509 EKETP--DEVRLWEDGFKDRYYESKFDVMP--QNIKFRQTVAWEYVRGLCWVLRYYYQGC 564
Query: 480 CSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLM 539
SW+W++PYHYAPFASD K L+ N F+ G PFKP QL+GVFP+AS +P + +LM
Sbjct: 565 ASWEWYFPYHYAPFASDFKHLENVNTHFDRGTPFKPLQQLMGVFPAASRSHVPPAFAELM 624
Query: 540 TDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 599
DP SPI DFYP DF +D+NGK+++WQG+A LPF+DE RL LTEEE RN
Sbjct: 625 VDPRSPIIDFYPIDFRIDLNGKKFAWQGVALLPFVDEKRLFKATDPKVPLLTEEERLRNE 684
Query: 600 IMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGD-P 658
LFVL P S TL + EV P D + G++ P + P
Sbjct: 685 NGDAKLFVL---PGSTGYRTLAGLYGGDDVDYNREV-----PITVDYVEGFVVPTKENVP 736
Query: 659 HPPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKPAPVLW 718
+ SP+ + + NQVL ++ P + +FP + +L++ K P +
Sbjct: 737 REGMLPSPIPGLPAVTENQVLTVRFQDP-------KYADDFVFPAR--RLDNAKEQPKVL 787
Query: 719 HEDSGRRPHENGRHNPHGTISGRQLGEAAHRLVANS 754
+ G R + G LG A HR++ ++
Sbjct: 788 GANEGPVIGFGQRTDRAG------LGAAGHRMLGHA 817
>gi|240278750|gb|EER42256.1| 5'->3' exoribonculease Dhp1 [Ajellomyces capsulatus H143]
gi|325090340|gb|EGC43650.1| 5'-3' exoribonculease Dhp1 [Ajellomyces capsulatus H88]
Length = 1042
Score = 516 bits (1329), Expect = e-143, Method: Compositional matrix adjust.
Identities = 286/678 (42%), Positives = 393/678 (57%), Gaps = 56/678 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERL-----RQEFEREGRKLPPKSDSQVFDSNVITPGTE 55
MNQQRSRRFR++++A ++ ++E +Q + G L + ++ +DSNVITPGT
Sbjct: 111 MNQQRSRRFRSAQEAKEADEKKEEFAKLLRKQNGSKGGEGLVEEVITKTWDSNVITPGTP 170
Query: 56 FMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNT 115
FM +L+ AL+Y++ +LN DP WEK+K+I+SDA VPGEGEHKIM ++R QR+ +DPNT
Sbjct: 171 FMDILAAALRYWVAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFIRSQRSCAEHDPNT 230
Query: 116 RHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRK 174
RH +YGLDADLIML LATHE HF +LRE V F + C LCGQ GH+A C+G AK K
Sbjct: 231 RHVIYGLDADLIMLGLATHEPHFRVLREDVFFQESKGRTCHLCGQTGHIAEACKGTAKEK 290
Query: 175 AGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVG 234
GEFDEKG P KP+ +LH+ LREYL E +P PF DLE +DD++FMCFFVG
Sbjct: 291 NGEFDEKGKGS--PLKPFIWLHVSVLREYLAVEMHVPQQPFPFDLERALDDWVFMCFFVG 348
Query: 235 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI 294
NDFLPH+P+L+IRE I+ L+A+++ A+ GYLT L R + +Q + ED I
Sbjct: 349 NDFLPHLPSLDIRENGIDTLIAIWRDNIPAMNGYLTKDGHVDLDRAQLILQGLAKQEDAI 408
Query: 295 FQKRARLHQRHAERIKREKAQARR----------------------GDDVEPLAQPDSLV 332
F++R + +R KR K + R G L P +V
Sbjct: 409 FRRRRQTEERKNANAKRRKEEERYREEERSREEERSRKKRRSSPNYGSMENELVPPPLIV 468
Query: 333 PVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENS 392
P + H SR + S V + + ++ K + G++ A E+S
Sbjct: 469 P-GKGHISRADRELTHSMLVNRGAVYKANMANKSAAAVLKSQLIKGGSSGDAVTAGVEDS 527
Query: 393 FETDPQENKEEFKAKLKELLRDKSDAFNSDNPEE-------------DKVKLGEPGWKER 439
+ N F L + K+DA ++ E D V+L E G+ +R
Sbjct: 528 VDGT-VNNTSPFS-----LGKRKADALETETESETPKKPDDTDELPPDTVRLWEDGYADR 581
Query: 440 YYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKD 499
YYE+KF+ + E R V Y EGL WV+ YY++G SW W+YPYHYAPFA+D D
Sbjct: 582 YYEQKFHVDPKDI--EFRHKVARAYVEGLAWVLLYYFQGCPSWTWYYPYHYAPFAADFVD 639
Query: 500 LDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMN 559
L I F G PFKPF QL+GV P+AS+HA+PE + LM+DP S I DFYP DF +D+N
Sbjct: 640 LGNMKIEFNKGAPFKPFEQLMGVLPAASNHAIPEVFHDLMSDPESEIIDFYPEDFPIDLN 699
Query: 560 GKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHP----LSA 615
GK+++WQG+A LPFIDE RLL ++K L+ EE RN+ ++LF+ HP L+A
Sbjct: 700 GKKFAWQGVALLPFIDEKRLLLAMEKRYPLLSNEEHARNTTGREILFLSDRHPLYENLTA 759
Query: 616 SIYTLDEHCKQLKIKERV 633
+ Y+ + LK+ RV
Sbjct: 760 NFYSKKQLAPTLKLNMRV 777
>gi|425770113|gb|EKV08587.1| 5'-3' exoribonuclease 2 [Penicillium digitatum Pd1]
gi|425771660|gb|EKV10097.1| 5'-3' exoribonuclease 2 [Penicillium digitatum PHI26]
Length = 1036
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 303/786 (38%), Positives = 438/786 (55%), Gaps = 79/786 (10%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLR-----QEFEREGRKLPPKSDSQ-VFDSNVITPGT 54
MNQQR+RRFRA+++A ++ ++E L+ Q + G +L + Q +DSNVITPGT
Sbjct: 111 MNQQRARRFRAAQEAKENDQKKEELQKMLAQQHVAKTGEQLVREEVVQKTWDSNVITPGT 170
Query: 55 EFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPN 114
FM +L+ +L+Y+I +LN DPGWE +K+I+SDA VPGEGEHKIM++VR QR P +DPN
Sbjct: 171 PFMDILAASLRYWIAYKLNTDPGWENLKIIISDATVPGEGEHKIMNFVRSQRASPNHDPN 230
Query: 115 TRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKR 173
TRH +YGLDADLIML L THE +F +LRE VF + + C LCGQ GH A C G+ K
Sbjct: 231 TRHVIYGLDADLIMLGLGTHEPYFRVLREDVFAQDSRPRGCRLCGQTGHKAEECLGRPKE 290
Query: 174 KAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFV 233
K+GEFDEK + P KP+ +LH+ LREYL E R+P PF DLE +DD++FMCFFV
Sbjct: 291 KSGEFDEK--QHAAPLKPFIWLHVAVLREYLAVELRVPQQPFPFDLERALDDWVFMCFFV 348
Query: 234 GNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDR 293
GNDFLPH+P+L+IRE I+ L+A+++ A+G YLT L+ + +Q + ED
Sbjct: 349 GNDFLPHLPSLDIRENGIDTLIAIWRDNLPAMGSYLTKDGSVELKNAQIILQGLAKQEDA 408
Query: 294 IFQKRARLHQRHAERIKR----------EKAQAR---------------RGDDVEPLAQP 328
IF +R + +R KR E+AQ R RG EP+ P
Sbjct: 409 IFARRRQADERKQANEKRRKEQDAARNKERAQKRRRSSPQRDLTAEDRSRGGGAEPVP-P 467
Query: 329 DSLVPVSRFHGSRLASGPSPSPYQQSECVGR--LDNGKGTSGRPHKVPRLSSGATIGAAI 386
L+ R H ++ + S V R ++N + K+ +++ A +
Sbjct: 468 MELITPGRGHLNKETRELTHSMVINRGAVYRANMENKSAAAVLKSKLMKVNQNARDSETL 527
Query: 387 VEAENSFETD-PQENKEEFKAKLKELLRDK-------------------SDAFNSDNPEE 426
T+ P+++ K K + ++ ++ D E
Sbjct: 528 ATNGEDVSTELPEQSSPGVLGKRKADVAEQDVTEAGTPGRDSPLANLAVAEKPKQDEAPE 587
Query: 427 DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFY 486
D VKL EPG+ +RYYE+KF + E R V Y GLCWV+ YY++G SW W+Y
Sbjct: 588 DTVKLWEPGYADRYYEQKFGVDPKD--LEFRHQVAREYAIGLCWVLRYYFQGCPSWTWYY 645
Query: 487 PYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPI 546
P HYAPFA+D D+ ++ FE G FKPF QL+GV P+AS+HALP+ + LM +P+S I
Sbjct: 646 PRHYAPFAADFVDIADMDVQFEKGTIFKPFEQLMGVLPAASNHALPKVFHPLMENPDSEI 705
Query: 547 SDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 606
DFYP DF +D+NGK+++WQG+ LPFIDE RLL+ + K+ LTE+E RNS ++L
Sbjct: 706 IDFYPEDFPLDLNGKKFAWQGVILLPFIDETRLLNAMAKVYPLLTEDEKSRNSHGQEVLL 765
Query: 607 VLLSHP----LSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAG-DPHPP 661
+ +P L A+ Y+ Q +KE ++S G+ G + PH
Sbjct: 766 LSDRNPLYQDLVANFYSKKPGPAQYPLKE----------DVSGGLAGIVERSETYIPHSS 815
Query: 662 VFRSPVAS--MEDIMGNQVLCAIYKLP-DAHKHVTRPPAGVIFPKKIVQLEDLKPAPVLW 718
+ SP+ + M + ++ L +Y +P +H H + GV P ++ D++ A
Sbjct: 816 LV-SPLEAHGMPGVDDDRSLTVLYSIPKTSHVHKSMLLRGVKLPTPMLDSNDIR-ATQTR 873
Query: 719 HEDSGR 724
++SGR
Sbjct: 874 SQNSGR 879
>gi|321474178|gb|EFX85144.1| hypothetical protein DAPPUDRAFT_194028 [Daphnia pulex]
Length = 827
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 314/764 (41%), Positives = 415/764 (54%), Gaps = 71/764 (9%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAV 59
MNQQRSRRFRASK+ A+ +R+ G +P KS + FDSN ITPGT FM
Sbjct: 112 MNQQRSRRFRASKEIAEKVMTIATVRESLMARGAYVPSEKSKGEHFDSNCITPGTPFMHR 171
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
LS L YY+H RL NDPGW+ + VILSDANVPGEGEHKIM Y+R QR P +DPNTRH L
Sbjct: 172 LSACLHYYVHDRLRNDPGWKNVSVILSDANVPGEGEHKIMDYIRRQRAQPSHDPNTRHVL 231
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
G DADLIML LATHE +F+I+RE F P + C +C Q GH +C+G + K GE D
Sbjct: 232 CGADADLIMLGLATHEPNFTIIRE-EFKPNKPRPCEICNQIGHDLNDCQGAERTKYGEND 290
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
E G + ++ Y F+ ++ LREYL+ E R+PN PFE DLE +DD++FMCFFVGNDFLP
Sbjct: 291 EIGPNIAA-EQNYIFVRLYVLREYLERELRMPNLPFEYDLERAIDDWVFMCFFVGNDFLP 349
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIREGAI+ L+ +YK G++TD +L RV+ + +G ED IF+KR
Sbjct: 350 HLPSLEIREGAIDRLVNLYKDCVYKTKGWVTDSGFVNLERVQIILSQLGHAEDEIFRKRQ 409
Query: 300 RLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGR 359
+R++ + RF G G P+ Q + R
Sbjct: 410 EDELSFRKRMRNKN---------------------KRFGG---GGGSRPAHLPQGQFAPR 445
Query: 360 LDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAF 419
GR P +++ + + Q E KLK +LR +
Sbjct: 446 ------AVGRGFSNPSITNA---------HQEILQGRQQAQNTEAAIKLKAMLRSAVNDD 490
Query: 420 NSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGV 479
+ D+ D+V+L E G+KERYYE KF P EE R V L Y GLCWV+ YYY+GV
Sbjct: 491 DEDDFSHDEVRLWEDGFKERYYESKF--AVPPTDEEFRSKVALEYVRGLCWVLQYYYQGV 548
Query: 480 CSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKL 538
SW+WF+PYHYAPFASD D+ F+ G PF+P QL+GVFP+AS +P+ + +L
Sbjct: 549 PSWKWFFPYHYAPFASDFLDISSVITVFKKGTKPFRPLEQLMGVFPAASRSHVPQPWGEL 608
Query: 539 MTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
M DP SPI DFYP DF++D+NGK+++WQG+A LPF+DE RL VK + LTE+E RRN
Sbjct: 609 MVDPESPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLKKAVKSLFDELTEDEKRRN 668
Query: 599 SIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI-----SP 653
+ + +FV H + L +E V K + G++G +
Sbjct: 669 VLGENQIFVGKHHKGYDFMRGLAGEVANSADEEFVAFK--MESSYFSGISGLVFASEKCV 726
Query: 654 CAGDPHPPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPA----GVIFPKKIVQLE 709
AG+ SPV +E I V+C Y+ P + PA G I P+
Sbjct: 727 VAGE----TLDSPVQGLEPIYDCHVVCLNYRDPMPDDINFKYPACRLEGAIVPRP----- 777
Query: 710 DLKPAPVLWHEDSGRRPHEN-GRHNPHGTISGRQLGEAAHRLVA 752
+LKP RP R N G QL A HR++
Sbjct: 778 ELKPQDFDESNSGPWRPQIGMSRSNQRG-----QLHTAGHRMLG 816
>gi|297260411|ref|XP_001094734.2| PREDICTED: 5'-3' exoribonuclease 2 isoform 2 [Macaca mulatta]
Length = 951
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 308/722 (42%), Positives = 411/722 (56%), Gaps = 68/722 (9%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 111 MNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 171 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 231 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDE 289
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 290 LADSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIRE AI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 350 LPSLEIRENAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKD 409
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSE 355
R K ++ + +R +P P ++ GS++AS P + Y+
Sbjct: 410 DEDSFRRRQKEKRKRMKRD---QPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYEM-- 464
Query: 356 CVGRLDNGKGTSGRPH-KVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRD 414
R+ N S P+ S + IG +AE+S
Sbjct: 465 ---RMQNNSSPSISPNTSFTSDGSPSPIGGIKRKAEDS---------------------- 499
Query: 415 KSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 474
+S+ ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ Y
Sbjct: 500 -----DSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRY 552
Query: 475 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSAS---SHA 530
YY+G SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS
Sbjct: 553 YYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASEMCDFC 612
Query: 531 LPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTL 590
L+ D S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ L
Sbjct: 613 FDSLLFSLIQD--SSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDL 670
Query: 591 TEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGY 650
T EE RRNS+ D+LFV HPL I L Q E V+V PEL G+ G
Sbjct: 671 TPEETRRNSLGGDVLFVGKHHPLHDFILEL----YQTGSTEPVDVP----PELCHGIQGK 722
Query: 651 ISPCAGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHV--------TRPPAGVI 700
S P + SPV + D+ N V+ +K P A ++ R PA V+
Sbjct: 723 FSLDEEAILPDQIVCSPVPMLRDLTQNTVVSINFKDPQFAEDYIFKAVMLPGARKPAAVL 782
Query: 701 FP 702
P
Sbjct: 783 KP 784
>gi|85078982|ref|XP_956265.1| hypothetical protein NCU01643 [Neurospora crassa OR74A]
gi|74630414|sp|Q8WZX5.3|XRN2_NEUCR RecName: Full=5'-3' exoribonuclease 2
gi|18307456|emb|CAD21516.1| related to dna exoribonuclease Dhp1p [Neurospora crassa]
gi|28917321|gb|EAA27029.1| hypothetical protein NCU01643 [Neurospora crassa OR74A]
Length = 1072
Score = 513 bits (1322), Expect = e-142, Method: Compositional matrix adjust.
Identities = 302/762 (39%), Positives = 412/762 (54%), Gaps = 66/762 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRK-----LPPKSDSQVFDSNVITPGTE 55
MNQQRSRRFRA+++A + ++++ + +++ K + FDSN ITPGT
Sbjct: 112 MNQQRSRRFRAAREAMEKEEDKQKFVELLKKQNGKPQEEEPVEVVVKKAFDSNSITPGTP 171
Query: 56 FMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNT 115
FM +L+ +L+Y+ +LN DP W IKVI+SDA VPGEGEHKIM +VR QR P +DPNT
Sbjct: 172 FMDILAASLRYWCSYKLNTDPAWANIKVIISDATVPGEGEHKIMEFVRSQRGSPNHDPNT 231
Query: 116 RHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKRK 174
RH +YGLDADLIML LATHE HF +LRE VF + + C +CGQ GH A NC+G+AK K
Sbjct: 232 RHVIYGLDADLIMLGLATHEPHFRVLREDVFAQDSRPRLCKICGQKGHDAMNCKGEAKEK 291
Query: 175 AGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVG 234
GEFDEK + VVP KP+ +LH+ LREYL E +P PF+ +LE +DD++FMCFFVG
Sbjct: 292 NGEFDEK--DAVVPLKPFIWLHVSILREYLAIELDVPGLPFQFNLERAIDDWVFMCFFVG 349
Query: 235 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI 294
NDFLPH+P LEIRE I+ L A++K +GGYLT L RV++ + + ED I
Sbjct: 350 NDFLPHLPALEIRENGIDTLTAIWKDNLPVMGGYLTKDGHADLERVQYIMAGLAKQEDAI 409
Query: 295 FQKRARLHQRHAERIKREK----AQARRGDDVEPLAQP--DSLVPVS-RFHGSRLASGPS 347
F++R R KR K A+ RR + Q +S P FH G +
Sbjct: 410 FRRRKETEDRREAGFKRRKLADEARQRRAQGSRQIRQAAENSGPPAGFSFHKINEFPGKA 469
Query: 348 PSPYQQSECVGR---LDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEE- 403
P P + V +D + V + + + EN E+ +
Sbjct: 470 PQPSITHDMVVNRQAVDQANVANKSAASVLKDQIKSMMAQGTSTPENGAESTETPAETAA 529
Query: 404 --------------FKAKLKELLRDK-----------SDAFNSDNPEEDKVKLGEPGWKE 438
+ EL+ D ++ SD D V+L E G+ +
Sbjct: 530 AAPATEEQAAPPAALGKRKAELIEDAVAGPEASSTEVTEISESDAEPTDSVRLWEEGYAD 589
Query: 439 RYYEEKFNAKTPEEREETRKDVVLR------YTEGLCWVMHYYYEGVCSWQWFYPYHYAP 492
RYYE+KF RKD+ R Y EGL WV+ YY++G SW+WFYPYHYAP
Sbjct: 590 RYYEQKFKVD--------RKDIDFRHKVGRAYAEGLAWVLEYYFQGCPSWEWFYPYHYAP 641
Query: 493 FASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPT 552
FA+D DL + I FE G +PF QL+ V P+AS HA+PE + LM + S I FYP
Sbjct: 642 FAADFVDLGKMEIKFEKGRISRPFEQLMSVLPAASRHAIPEVFHSLMLEETSEIRHFYPD 701
Query: 553 DFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHP 612
DFE+D+NGK+ +WQG+A LPFID RLL ++ H L+ E+ RN+ D L + SHP
Sbjct: 702 DFEIDLNGKKMAWQGVALLPFIDMPRLLAAMETKSHLLSPEDHLRNAPGKDYLLLSDSHP 761
Query: 613 LSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAG-DPH-PPVFRSPVASM 670
++Y D Q K++ K L+P S G++G + G PH V+ SM
Sbjct: 762 ---TLY--DHITSQFYSKKQGTTKFELDPTKSAGLSGLVEKIDGYVPHGSLVYPLSRNSM 816
Query: 671 EDIMGNQVLCAIYKLPD-AHKHVTRPPAGVIFPKKIVQLEDL 711
D+ ++ L Y PD +H H + GV P + D+
Sbjct: 817 PDVDYDRSLMVHYFFPDCSHTHKSMLLRGVQMPTPALTRSDI 858
>gi|408399376|gb|EKJ78479.1| hypothetical protein FPSE_01288 [Fusarium pseudograminearum CS3096]
Length = 980
Score = 513 bits (1322), Expect = e-142, Method: Compositional matrix adjust.
Identities = 302/747 (40%), Positives = 421/747 (56%), Gaps = 52/747 (6%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFERE-GRKLPPKSDSQV----FDSNVITPGTE 55
MNQQRSRRFR++++A + +++ L + +++ G L +S V FDSN ITPGT
Sbjct: 112 MNQQRSRRFRSAQEAQEKEQDKQELIKMLKQQNGGNLSTESLETVTKKAFDSNSITPGTP 171
Query: 56 FMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNT 115
FM +L+++L+Y+ +LN DPGW K+K+I+SDA VPGEGEHKIM++VR QR P +DPNT
Sbjct: 172 FMDILALSLRYWCQYKLNTDPGWAKLKIIISDATVPGEGEHKIMNFVRSQRASPDHDPNT 231
Query: 116 RHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKRK 174
RH +YGLDADLIML LATHE HF +LRE VF Q+ + C +CGQ GH A NC G+ K+K
Sbjct: 232 RHVIYGLDADLIMLGLATHEPHFRVLREDVFFQDQKARLCKICGQKGHDAQNCRGEEKKK 291
Query: 175 AGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVG 234
GE DEK V + KP+ +LH+ LREYL E +PN PF DLE VDD+IFMC FVG
Sbjct: 292 DGEHDEKDKGVAL--KPFIWLHVAVLREYLAVELGVPNLPFRFDLERAVDDWIFMCCFVG 349
Query: 235 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI 294
NDFLPH+P LEIRE I+ L ++K +GGY+T L R + + + ED I
Sbjct: 350 NDFLPHLPALEIREHGIDTLTKIWKDNLPVMGGYVTKDGHIDLERAQVILDGLAQQEDNI 409
Query: 295 FQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQS 354
F++R R KR K Q P H ++ +P
Sbjct: 410 FKRRKEQEDRREANFKRRKLQNEGNGRGGRQGGPS--------HPKKINGHENPENGLPL 461
Query: 355 ECVGRL----------DNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEE- 403
+ VG D S P S A++ A ++++ S EN E+
Sbjct: 462 QAVGAYTDRHEQALTHDMVVNRSTAPDANVANKSAASVLKAQLQSQKSLSNPKPENPEQD 521
Query: 404 --------FKAKLKELLRDKSDAFNSDNP----EE---DKVKLGEPGWKERYYEEKFNAK 448
+ ++E DA + P EE D V+L E G+ +RYYE+KF+ K
Sbjct: 522 SPSALGKRKASSIEEGNSSVPDAASVSTPSVPAEEGPVDDVRLWEDGYADRYYEKKFH-K 580
Query: 449 TPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFE 508
P++ E R V Y EGL WV+ YY++G SW+W+YPYHYAPFA+D KD+ + NISFE
Sbjct: 581 DPKDIE-FRHGVGRAYVEGLAWVLLYYFQGCPSWEWYYPYHYAPFAADFKDIAKMNISFE 639
Query: 509 LGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGI 568
G KPF QL+ V P+AS HALPE + LM +P S I DFYP DF++D+NGK+++WQG+
Sbjct: 640 KGRVSKPFEQLMSVLPAASRHALPEVFHDLMLNPESNIIDFYPEDFQIDLNGKKFAWQGV 699
Query: 569 AKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLK 628
A LPFI+ RLL V+ L+ ++ RN + D+L H S+Y DE +
Sbjct: 700 ALLPFIEMPRLLAAVQSKYPELSAADSARNEMGRDVLIFSEGH---ESLY--DEVLTKFY 754
Query: 629 IKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSPVA--SMEDIMGNQVLCAIYKLP 686
K++ + K +LNP+ SDG++G + G + P+ SM D+ ++ + Y P
Sbjct: 755 SKKQGDSKFKLNPKKSDGLSGRVEKKEGYVPHSELKYPLERNSMPDLDYDRSVSVYYDFP 814
Query: 687 DAHK-HVTRPPAGVIFPKKIVQLEDLK 712
A + H + GV P + D++
Sbjct: 815 QASQTHKSMLLRGVQLPTPALTQNDIQ 841
>gi|301111760|ref|XP_002904959.1| 5'-3' exoribonuclease, putative [Phytophthora infestans T30-4]
gi|262095289|gb|EEY53341.1| 5'-3' exoribonuclease, putative [Phytophthora infestans T30-4]
Length = 972
Score = 513 bits (1322), Expect = e-142, Method: Compositional matrix adjust.
Identities = 307/727 (42%), Positives = 407/727 (55%), Gaps = 81/727 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR++++A E+ + G K+P K + + +DSNVITPGT+FMA L
Sbjct: 113 MNQQRARRFRSAQEAEQRMEVEKEALEYMSALGHKVPSKQE-KPWDSNVITPGTKFMAKL 171
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L++YI R+NN+ W+ IK+ILSDA VPGEGEHK+M Y+R+QR+ PGYDPN H L+
Sbjct: 172 AKHLRFYIRDRVNNNAAWKSIKIILSDAGVPGEGEHKLMQYIRVQRSQPGYDPNQHHVLH 231
Query: 121 GLDADLIMLALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADLIML LATHEV FSILR EV+F + ++ Q L AN KRK GEF
Sbjct: 232 GLDADLIMLGLATHEVKFSILREEVLFGKQKYERERQKEQQTVLDANGTTLNKRKRGEFG 291
Query: 180 E-KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPN--PPFEIDLECIVDDFIFMCFFVGND 236
E D V KP Q+LHI TLREYL EF + PFE D E ++DDF+F+CFFVGND
Sbjct: 292 EHDADLVASDLKPLQYLHIATLREYLQVEFEPLSRVLPFEYDFERVIDDFVFLCFFVGND 351
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLPH+P+L+IR+GA++ L+ +Y K A+GGY+TDG L RV+ + VG ED IFQ
Sbjct: 352 FLPHLPSLDIRDGALDFLILIYAKLLPAMGGYITDGGHVDLSRVDVILAEVGQVEDVIFQ 411
Query: 297 KRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSEC 356
+RA L Q ER ++ + D + A DS V + +
Sbjct: 412 RRA-LKQAENERRRKSHLSNEKKDQIAAAAAKDSAVEILKKR------------------ 452
Query: 357 VGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKS 416
R+D I+ A+ + E E KA++KE + K
Sbjct: 453 --RIDKD----------------------IIAADKKYGGLTAE--EAVKARVKESVEKKL 486
Query: 417 DAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYY 476
+ + + +D V+LGEPGWK RYY +K A E R+ V Y EGLCWVM YYY
Sbjct: 487 EQYREE--VQDVVRLGEPGWKTRYYSDKLKADDIEV-GGGRERVFHAYIEGLCWVMRYYY 543
Query: 477 EGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYR 536
G SWQWFYP+HYAPFASDL+++D+F I F+ G PF PF QL+GVFP+ S HA+P+ YR
Sbjct: 544 TGCASWQWFYPFHYAPFASDLRNIDRFEIKFDEGLPFHPFEQLMGVFPAGSGHAIPKPYR 603
Query: 537 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 596
LM+DP SPI DFYPT+ VD NGK W + LPFIDE RLL+ +K+ LTE E +
Sbjct: 604 SLMSDPESPIIDFYPTEIPVDPNGKAMPWLWVVLLPFIDEERLLEAMKEPNQKLTEAEKK 663
Query: 597 RNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKE-RLNPELSDGMNG---YIS 652
RN+ + C K E+ E + +P +S NG YI
Sbjct: 664 RNA------------RFGKEVVFFHTKCPVTKNPPTTELAEAQADPRISQSFNGSLIYIE 711
Query: 653 ----PCAGDPHPPVFRSPVAS---MEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKI 705
P G + SP S + DI NQ Y+LP H+++ G P +
Sbjct: 712 SLYFPIGG-----IVPSPEKSQRHLADIPNNQCYSFQYRLPPTLPHLSKILDGAQSPCPV 766
Query: 706 VQLEDLK 712
+ ++ K
Sbjct: 767 LITDNDK 773
>gi|70995976|ref|XP_752743.1| 5'->3' exoribonculease Dhp1 [Aspergillus fumigatus Af293]
gi|74630336|sp|Q8TFZ1.4|XRN2_ASPFU RecName: Full=5'-3' exoribonuclease 2
gi|44889966|emb|CAD29606.2| 5'->3'exoribonuclease, putative [Aspergillus fumigatus]
gi|66850378|gb|EAL90705.1| 5'->3' exoribonculease Dhp1 [Aspergillus fumigatus Af293]
gi|159131498|gb|EDP56611.1| 5'->3' exoribonculease Dhp1 [Aspergillus fumigatus A1163]
Length = 1058
Score = 513 bits (1322), Expect = e-142, Method: Compositional matrix adjust.
Identities = 304/768 (39%), Positives = 434/768 (56%), Gaps = 81/768 (10%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFERE-GRKLPPKSDSQV----FDSNVITPGTE 55
MNQQR+RRFR++++A ++ ++E R+ ++ G K+ + +V +DSNVITPGT
Sbjct: 111 MNQQRARRFRSAQEAKEADEKKEEFRKMLAKQNGNKVDEELQEEVVKKTWDSNVITPGTP 170
Query: 56 FMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNT 115
FM +L+ +L+Y+I +LN DP WEK+K+I+SDA VPGEGEHKIM ++R QR P +DPNT
Sbjct: 171 FMDILAASLRYWIAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFIRSQRAAPEHDPNT 230
Query: 116 RHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRK 174
RH +YGLDADLIML LATHE HF +LRE V F + C LCGQ GH A C G+AK K
Sbjct: 231 RHVIYGLDADLIMLGLATHEPHFRVLREDVFFQESRARTCHLCGQQGHKAEECRGQAKEK 290
Query: 175 AGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVG 234
GEFDEK + KP+ +LH+ LREYL E +P+ PF DLE +DD++FMCFFVG
Sbjct: 291 NGEFDEKQKGSSL--KPFIWLHVSILREYLAAELYVPHQPFPFDLERALDDWVFMCFFVG 348
Query: 235 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI 294
NDFLPH+P+L+IRE I+ L+A+++ +GGYLT+ L+R + +Q + ED I
Sbjct: 349 NDFLPHLPSLDIRENGIDTLIAIWRDNIPVMGGYLTEDGHVDLKRAQLILQGLAKQEDAI 408
Query: 295 FQKRARLHQRHAERIKREKAQA------------------------------RRGDDVEP 324
F++R + +R KR K +A R G D P
Sbjct: 409 FRRRRQAEERKLANEKRRKQEAKAREEERARKRRRSSPTYEPMDSPVGHRAPRGGGDAAP 468
Query: 325 LAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGR--LDNGKGTSGRPHKVPRLSSGATI 382
Q + + P SR SR + S V R + N + K+ + S
Sbjct: 469 PNQLELITP-SRGELSRQTRELTHSMVVNRGAVYRANMANKSAAAVLKSKLMQGSQNGQN 527
Query: 383 GAAIVEAENSFETDPQENKEE------------FKAKLKELLRDKSDAFNSDNP------ 424
G E + +P +++ + KA L E + D+P
Sbjct: 528 GEEKSEGATTNNDEPSQDQPDQTEQTSPSVLGKRKADLVEEEDTDAGTPGRDSPAVPVAA 587
Query: 425 EEDK-----VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGV 479
+ED+ V+L E G+ +RYYE+KF P+++ E R V Y EGL WV+ YY++G
Sbjct: 588 KEDELPPDTVRLWEEGYADRYYEQKFGVD-PQDK-EFRHKVARAYAEGLAWVLLYYFQGC 645
Query: 480 CSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLM 539
SW W+YPYHYAPFA+D D+ I+F+ G PFKPF QL+GV P++S+HA+P+ + LM
Sbjct: 646 PSWTWYYPYHYAPFAADFVDIGDMEITFDKGVPFKPFEQLMGVLPASSNHAIPKVFHDLM 705
Query: 540 TDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 599
+ P+S I DFYP DF VD+NGK+++WQG+ LPFIDE RLL ++K LTE+E RNS
Sbjct: 706 SSPDSEIIDFYPEDFAVDLNGKKFAWQGVILLPFIDEKRLLAAMEKKYPLLTEDEKLRNS 765
Query: 600 IMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPC-AGDP 658
+ ++L + +HPL + K++ K +LN +SDG+ G + A P
Sbjct: 766 VGREVLLISEAHPLYQDL------VANFYSKKQGVQKYKLNMRISDGLAGKVERNEAYIP 819
Query: 659 HPPVFRS----PVASMEDIMGNQVLCAIYKLPDA-HKHVTRPPAGVIF 701
H + S + S+ED ++ L Y++P + H H + GV F
Sbjct: 820 HSSLPSSLEEYGMPSLED---DRSLTVNYEIPKSNHVHKSMLLRGVKF 864
>gi|328697664|ref|XP_003240404.1| PREDICTED: 5'-3' exoribonuclease 2 homolog [Acyrthosiphon pisum]
Length = 958
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 347/925 (37%), Positives = 482/925 (52%), Gaps = 120/925 (12%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAV 59
MNQQRSRRFRASK+ + E R+R+ G LPP K + FDSN ITPGT FM
Sbjct: 111 MNQQRSRRFRASKETTEKTEELARVRKNLIEAGAILPPEKQKGEHFDSNCITPGTPFMDK 170
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
LS L YY+H RLNNDPGW+ IKVILSDANVPGEGEHKIM +VR QR P +DPNT+H L
Sbjct: 171 LSACLHYYVHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDFVRKQRAQPNHDPNTQHVL 230
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
G DADLIML LATHE +F+I+RE F P Q C +CGQ GH +C+G +R+A F+
Sbjct: 231 CGADADLIMLGLATHEPNFTIIRE-EFKPNQPKPCDMCGQMGHEIKDCQG-LEREA--FN 286
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
+ + F+ + LREYL+ E +PN PF+ + E +DD++FMCFFVGNDFLP
Sbjct: 287 DGSTIEFSADVQFIFVRLNVLREYLERELEMPNLPFKYEFERALDDWVFMCFFVGNDFLP 346
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIRE AI+ L+++YKK GG+LT +L RV+ + +G ED IF+KR
Sbjct: 347 HLPSLEIRENAIDRLVSLYKKTVYKTGGFLTASGDVNLDRVQLIMSDLGMAEDEIFKKRQ 406
Query: 300 RLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGR 359
+ + A+R K +K + ++ + + P+ ++ G + A + + S
Sbjct: 407 QTEKMFADRNKLKKRREKQDKLMRSKSAPNFVL------GGQYAPSAPNTAFSISNPRQT 460
Query: 360 LDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAF 419
+D ++ R S G EN + K K RD +++
Sbjct: 461 VD----------EMRRQSVG------------------NENNQGVKRK-----RDDNESS 487
Query: 420 NSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGV 479
+ + D+V+L E G+KERYYE KF+ R V L Y GLCWV+ YYY+G
Sbjct: 488 DEEKETPDEVRLWEDGFKERYYESKFDVD--RTNSGFRHQVALEYVRGLCWVLQYYYQGC 545
Query: 480 CSWQWFYPYHYAPFASDLKDLDQFNISFELGH-PFKPFNQLLGVFPSASSHALPEHYRKL 538
SW+W++PYHYAPFASD ++ + FE G PF+P QL+ VFP+ASS+ +P+ + L
Sbjct: 546 PSWKWYFPYHYAPFASDFLNISAVSTKFEKGTVPFRPLEQLMSVFPAASSNHVPQPWAIL 605
Query: 539 MTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
M+DP SPI DFYP DF++D+NGK+++WQG+A LPF++EARL ++ LT EE RRN
Sbjct: 606 MSDPESPIIDFYPVDFKIDLNGKKFAWQGVALLPFVEEARLHKALEPYYDLLTSEERRRN 665
Query: 599 SIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI---SPCA 655
D L++ + S Y L K+L + + + E L L DGM G I C
Sbjct: 666 VKGMDRLYIQQDN----SKYEL---LKELYLNK--DNYENLTSVLIDGMEGKIMLADDCV 716
Query: 656 --GDPHPPVFRSPVASMEDIMGNQVLCAIYKLP---DAHKHVTRPPAGVIFPKKIVQLED 710
G P SPV + + NQV+C ++ P D + GVI P ++
Sbjct: 717 KIGGSLP----SPVMGLNVVRSNQVICVKFEDPSYGDNYIFEAIRLQGVIEPPRV----- 767
Query: 711 LKPAPVLWHEDSGRRPHENGRHNPHGTISGRQLGEAAHRLVANSLQHMKVDRNGYGDRMH 770
LKP + + RP H+ +L A HR +L H Y R +
Sbjct: 768 LKPKHLSDEQSRSWRPMIGMTHSNQRV----RLATAGHR----TLSH-------YSPR-N 811
Query: 771 GSPLPYAAAPY--VPPVPSYQEYGVYDQGYNRFSQPRTDSYPAGHSQSS---ISAAQPPY 825
S P ++ Y VPP SY+ G R + YP+ SS + Q P
Sbjct: 812 ASSAPRNSSNYGSVPPPQSYRNNG------------RQNDYPSSRRPSSNWHANQNQFPQ 859
Query: 826 DGGYSQHYA--SNTSHHPNRRYHPQYDRNSSGEHPTHLYNPSGIHQNGGPRYPPRPMGST 883
+ +Y N S+ + +P Y H + + +N P Y ST
Sbjct: 860 NDQNRGNYGRQQNNSYRSDNNAYPNYGTQ-------HTSDQQSMRRNDRPGY-----YST 907
Query: 884 SSGANLYPPQGGYSGYQSPAAGSFN 908
AN P+ ++G P GS N
Sbjct: 908 GYQANNSQPRQSFNGNVGPIRGSQN 932
>gi|121701237|ref|XP_001268883.1| 5'->3' exoribonculease Dhp1 [Aspergillus clavatus NRRL 1]
gi|119397026|gb|EAW07457.1| 5'->3' exoribonculease Dhp1 [Aspergillus clavatus NRRL 1]
Length = 1043
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 300/762 (39%), Positives = 431/762 (56%), Gaps = 75/762 (9%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREG-----RKLPPKSDSQVFDSNVITPGTE 55
MNQQR+RRFR++++A ++ ++E R+ ++ ++L + + +DSNVITPGT
Sbjct: 111 MNQQRARRFRSAQEAREADEKKEEFRKMLAKQNGNKADQELHEEVIQKTWDSNVITPGTP 170
Query: 56 FMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNT 115
FM +L+ +L+Y+I +LN DP WEK+K+I+SDA VPGEGEHKIM +VR QR P +DPNT
Sbjct: 171 FMDILAASLRYWIAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFVRSQRAAPEHDPNT 230
Query: 116 RHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRK 174
RH +YGLDADLIML LATHE HF +LRE V F + C LCGQPGH A C G+AK K
Sbjct: 231 RHVIYGLDADLIMLGLATHEPHFRVLREDVFFQESRPRTCNLCGQPGHKAEECRGQAKEK 290
Query: 175 AGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVG 234
GEFDEK + KP+ +LH+ LREYL E +P PF DLE +DD++FMCFFVG
Sbjct: 291 NGEFDEKQKGSSL--KPFIWLHVSVLREYLAAELYVPQQPFPFDLERALDDWVFMCFFVG 348
Query: 235 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI 294
NDFLPH+P+L+IRE I+ L+A+++ +GGYLT+ L+R + +Q + ED I
Sbjct: 349 NDFLPHLPSLDIRENGIDTLIAIWRDNIPVMGGYLTEDGHVDLKRAQLILQGLAKQEDAI 408
Query: 295 FQKR--------ARLHQRHAERIKREKAQA---------------------RRGDDVEPL 325
F++R A +R E RE+ +A R G D+ P
Sbjct: 409 FRRRRQAEERKLANEKRRKQEAKAREEDRASKRRRSSPNYDALESTSGQRSRGGGDLAP- 467
Query: 326 AQPDSLVPVSRFHGSRLASGPSPSPYQQSECV--GRLDNGKGTSGRPHKVPRLSSGATIG 383
P L+ R SR + S V + N + K+ + S
Sbjct: 468 PTPVELITPGRGVLSRETRELTHSMVVNRSAVYKANMANKSAAAVLKSKLMKGSQDDENA 527
Query: 384 AAIVEAENSFETDPQENKEE---------FKAKLKELLRDKSD---------AFNSDNPE 425
A E +S +P + ++ + E++ ++S A D
Sbjct: 528 GADAEEPDSNNGEPAQESQDPAEQTSPSVLGKRNVEVVEEESADAGTPVVPAAAKEDELP 587
Query: 426 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 485
D V+L E G+ +RYY +KF PE++E R V Y EGL WV+ YY++G SW W+
Sbjct: 588 PDTVRLWEEGYADRYYAQKFGV-GPEDKE-FRHKVARAYAEGLAWVLLYYFQGCPSWTWY 645
Query: 486 YPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 545
+PYHYAPFA+D D+ ISF+ G PF+PF QL+GV P++S+HA+PE + LM++P+S
Sbjct: 646 FPYHYAPFAADFVDIGDMEISFDKGIPFRPFEQLMGVLPASSNHAIPEVFHDLMSNPSSE 705
Query: 546 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 605
I DFYP DF VD+NGK+++WQG+ LPFIDE RLL ++K L+E+E RNS+ D+L
Sbjct: 706 IIDFYPEDFAVDLNGKKFAWQGVILLPFIDERRLLAAMEKKYPLLSEDEKLRNSVGRDVL 765
Query: 606 FVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRS 665
+ +HPL + K++ K +LN +SDG+ G + D + P S
Sbjct: 766 LISEAHPLYQDL------VGNFYSKKQDASKYKLNMRISDGLAGRVE--RNDAYIP-HSS 816
Query: 666 PVASMED-----IMGNQVLCAIYKLP-DAHKHVTRPPAGVIF 701
V+S+E+ + ++ L Y++P +H H + GV F
Sbjct: 817 LVSSLEEYGMPSLDDDRSLIVNYEIPKSSHVHKSMLLRGVKF 858
>gi|307204797|gb|EFN83355.1| 5'-3' exoribonuclease 2-like protein [Harpegnathos saltator]
Length = 880
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 307/768 (39%), Positives = 426/768 (55%), Gaps = 60/768 (7%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQV-FDSNVITPGTEFMAV 59
MNQQRSRRFRASK+ + E +R+R E +G LPP+ + FDSN ITPGT FM+
Sbjct: 111 MNQQRSRRFRASKETTEKIDEIQRIRTELSLKGASLPPEKPKEAHFDSNCITPGTPFMSR 170
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
LS L YYIH RLNNDPGW IK+ILSDANVPGEGEHKIM ++R QR+ P +DPNT+H L
Sbjct: 171 LSACLHYYIHERLNNDPGWRNIKIILSDANVPGEGEHKIMDFIRRQRSQPDHDPNTQHVL 230
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
G DADLIML LATHE +F+I+RE F P + C +CGQ GH +C G + E +
Sbjct: 231 CGADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCDICGQLGHEMRDCTGAEPNQKEEEN 289
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
G E + F+ + LREYL+ E +PN PF+ D E VDD++FMCFFVGNDFLP
Sbjct: 290 AYGSEC-----QFIFVRLNVLREYLERELSMPNLPFKYDFERAVDDWVFMCFFVGNDFLP 344
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIREGAI+ L+ +YKK GG+LTD +L RV+ + +G ED IF+KR
Sbjct: 345 HLPSLEIREGAIDRLVTLYKKAVYKTGGFLTDSGDVNLDRVQLIMSDLGDVEDEIFKKR- 403
Query: 300 RLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGR 359
+ +REK + RR + + +P +F + L P + E
Sbjct: 404 --QENELAFKQREKDKKRRHEIISNFKP--KWIPAGQFAPTALGQAVKPIENARYEAYQM 459
Query: 360 LDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAF 419
G+ + T A A ++ E+ + K + +++ + D
Sbjct: 460 RVQGRNYN-------------TNVAENKNANHALESMLRPENTSNKGQKRKI--ESVDPE 504
Query: 420 NSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGV 479
+ D D+V+L E G+K+RYYE KF +P+ R +V L+Y +GLCWV+ YYY+G
Sbjct: 505 SDDEQAHDEVRLWEDGFKDRYYESKFGV-SPDNL-AFRNNVALQYVQGLCWVLRYYYQGC 562
Query: 480 CSWQWFYPYHYAPFASDLKDLDQFNISFELGH-PFKPFNQLLGVFPSASSHALPEHYRKL 538
SW+W++PYHYAPFASD ++ + FE G PF+P QL+ VFP+ASS +P + KL
Sbjct: 563 ASWRWYFPYHYAPFASDFINIGGLSTEFEKGTIPFRPLEQLMAVFPAASSKHVPVPWAKL 622
Query: 539 MTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
M+DP S I DFYP DF++D+NGK+++WQG+A LPF+DE RL + +LTE E +RN
Sbjct: 623 MSDPRSSIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEQRLFKALASYYDSLTEAEKKRN 682
Query: 599 SIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI---SPCA 655
D L+V + + T + K+ I +RVE + L+ + DGM G I C
Sbjct: 683 VRGDDRLYVGMGN-------TGYNYIKKTYI-DRVEFDKELDIRI-DGMRGTIFLSEDCV 733
Query: 656 GDPHPPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPA---GVIFPKKIVQLEDLK 712
+ SPV + + N+V C +K P P G P ++++ +D
Sbjct: 734 SEGG--TLPSPVRGLP-VRNNKVYCVKFKDPQYSSSHIFPACKLKGAKEPSRVLKPQDF- 789
Query: 713 PAPVLWHEDSGRRPHENGRHNPHG---TISGRQLGEAAHRLVANSLQH 757
D+ R N G T LG+A HR++ H
Sbjct: 790 --------DAMNRDTRNQWKPQIGFTRTTQSASLGQAGHRMLERYTNH 829
>gi|400592939|gb|EJP60965.1| XRN 5'-3' exonuclease [Beauveria bassiana ARSEF 2860]
Length = 968
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 304/743 (40%), Positives = 417/743 (56%), Gaps = 43/743 (5%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFERE-GRKLPPKSDSQV----FDSNVITPGTE 55
MNQQRSRRFR++++A + +++ L + +++ G L +S V FD+N ITPGT
Sbjct: 112 MNQQRSRRFRSAQEAKEKENDKQELIKLLKQQNGGSLTAESTESVTKKAFDNNSITPGTP 171
Query: 56 FMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNT 115
FM +L+ +L+Y+ +LN DPGW K+KVI+SDA VPGEGEHKIM++VR QR P YDPNT
Sbjct: 172 FMDILASSLRYWCQYKLNTDPGWAKLKVIISDATVPGEGEHKIMNFVRSQRASPDYDPNT 231
Query: 116 RHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRK 174
RH +YGLDADLIML LATHE HF +LRE V F + C LCGQ GH A NC+G+ K
Sbjct: 232 RHVIYGLDADLIMLGLATHEPHFRVLREDVFFQDSKARACKLCGQKGHDAQNCKGETKEP 291
Query: 175 AGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVG 234
EFD K + + + KP+ +LH+ LREYL E IP PF DLE ++DD+IFMC FVG
Sbjct: 292 TEEFDAKNNALTL--KPFIWLHVSVLREYLAAELAIPELPFRFDLERVIDDWIFMCCFVG 349
Query: 235 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI 294
NDFLPH+P LEIRE I+ L ++K+ ALGGY+T L R + + + ED I
Sbjct: 350 NDFLPHLPALEIREHGIDTLTTIWKRNLPALGGYITKDGHIDLERAQCILDGLAGQEDMI 409
Query: 295 FQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPS-PYQQ 353
F+KR R KR + Q + + L LA P S P
Sbjct: 410 FKKRREQEDRREASAKRRRLQNNGATGRDNRSDGKGLKSGHEDPSRGLALHPIGSMPIAP 469
Query: 354 SECVGRLDNGKGTSGRPHKVPRLSSGATI--------GAAIVEAENSFETDPQENKEEFK 405
+ + T V S+ + + GA EA + D + K
Sbjct: 470 LKAITHDMTVNRTGAADANVANKSAASVLKERLKAGRGALSPEANSKDTKDTPSHSVPVK 529
Query: 406 AKLK------ELLRDKSDAFNS--DNPEE--DKVKLGEPGWKERYYEEKFNAKTPEEREE 455
KL E + + N+ D PE D V+L E G+ +RYY+ KF+ + P +
Sbjct: 530 RKLSAVEAFAESTSNDAQGTNTPGDKPETPADPVRLWEDGYADRYYQLKFH-RDPGDI-S 587
Query: 456 TRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKP 515
R V Y EGL WV+ YY++G SW+W+YPYHYAPFA+D KD+ Q N++FE G +P
Sbjct: 588 FRTHVAHAYVEGLAWVLQYYFQGCPSWEWYYPYHYAPFAADFKDISQANVTFEKGTVSRP 647
Query: 516 FNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFID 575
F QL+ V P+AS LPE + LMTD +S I DFYP +FEVD+NGK+ +WQG+A LPFI+
Sbjct: 648 FEQLMSVLPAASRDNLPEVFHSLMTDQDSLIIDFYPEEFEVDLNGKKMAWQGVALLPFIE 707
Query: 576 EARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEV 635
RLL V+K L++E+ +RN + D+L + SH SIY DE K++
Sbjct: 708 MDRLLAAVQKRYPLLSDEDRKRNGVGRDVLLLSDSH---ESIY--DEILTNFYSKKQGST 762
Query: 636 KERLNPELSDGMNGYISPCA-----GDPHPPVFRSPVASMEDIMGNQVLCAIYKLPD-AH 689
+ RLNP+ SDG++GY+ G H P+ R SM D+ ++ + Y +P H
Sbjct: 763 QFRLNPKTSDGLSGYVEKQEGYVPHGTLHYPLERK---SMPDLDYDRSMSVNYDMPKMTH 819
Query: 690 KHVTRPPAGVIFPKKIVQLEDLK 712
H + GV P + D++
Sbjct: 820 DHKSMLLRGVKMPSPALTRSDIE 842
>gi|342889646|gb|EGU88669.1| hypothetical protein FOXB_00813 [Fusarium oxysporum Fo5176]
Length = 3523
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 305/754 (40%), Positives = 434/754 (57%), Gaps = 67/754 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFERE-GRKLPPKSDSQV----FDSNVITPGTE 55
MNQQRSRRFR++++A + +++ L + +++ G L +S+ V FDSN ITPGT
Sbjct: 112 MNQQRSRRFRSAQEAQEKEKDKQELIKLLKQQNGGNLTAESEETVLKKAFDSNSITPGTP 171
Query: 56 FMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNT 115
FM +L+++L+Y+ +LN DPGW K+K+I+SDA VPGEGEHKIM++VR QR P +DPNT
Sbjct: 172 FMDILALSLRYWCQYKLNTDPGWAKLKIIISDATVPGEGEHKIMNFVRSQRASPDHDPNT 231
Query: 116 RHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKRK 174
RH +YGLDADLIML LATHE HF +LRE VF Q+ + C LCGQ GH A NC G+ K+K
Sbjct: 232 RHVIYGLDADLIMLGLATHEPHFRVLREDVFFQEQKARLCKLCGQKGHDAQNCRGEEKKK 291
Query: 175 AGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVG 234
GE DEK V + KP+ +LH+ LREYL+ E +PN PF D+E VDD+IFMC FVG
Sbjct: 292 DGEHDEKDKGVAL--KPFIWLHVAVLREYLEVELSVPNLPFRFDVERAVDDWIFMCCFVG 349
Query: 235 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI 294
NDFLPH+P LEIRE I+ L ++K +GGY+T L R + + + ED I
Sbjct: 350 NDFLPHLPALEIREHGIDTLTKIWKDNLPVMGGYVTKDGHIDLERAQVILSGLAKQEDGI 409
Query: 295 FQKRARLHQRHAERIKREKAQARRG------------DDVEPLAQPDSLV--PVSRFHGS 340
F++R R KR K Q + L P +++ P++ F
Sbjct: 410 FKRRKEQEDRREANFKRRKLQNENNGRGGRQGGPAHPKKINGLENPANVLLQPITSF--- 466
Query: 341 RLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFET-DPQE 399
SGP+ V R S P S A++ A ++++ S T P E
Sbjct: 467 ---SGPNEQRLTHDMIVNR-------SSAPDANVANKSAASVLKAQLQSQKSLSTAKPAE 516
Query: 400 NKEEFKAKLKELLR-----------DKSDAFNSDNPEE----DKVKLGEPGWKERYYEEK 444
++ + L + D S+A P E D V+L E G+ +RYYE+K
Sbjct: 517 ADQDSASALGKRKASSLEEGDGSTPDTSNAPTPAAPAEEGPVDDVRLWEDGYADRYYEKK 576
Query: 445 FNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFN 504
F+ K P++ E R +V Y EGL WV+ YY++G SW+W+YPYHYAPFA+D +D+D+
Sbjct: 577 FH-KDPQDIE-FRHEVARAYVEGLAWVLLYYFQGCPSWEWYYPYHYAPFAADFQDIDKMK 634
Query: 505 ISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYS 564
ISFE G KPF QL+ V P+AS HALPE + LM +P S I DFYP DFE+D+NGK+ +
Sbjct: 635 ISFEKGRISKPFEQLMSVLPAASRHALPEVFHDLMLNPESNIIDFYPEDFEIDLNGKKMA 694
Query: 565 WQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHC 624
WQG+A LPFI+ RLL V+ L+ ++ RN + D+L +H S+Y D+
Sbjct: 695 WQGVALLPFIEMPRLLAAVQAKYPELSAADSARNEMGRDVLIFSEAHE---SLY--DDVL 749
Query: 625 KQLKIKERVEVKERLNPELSDGMNGYISPCAG-DPHP----PVFRSPVASMEDIMGNQVL 679
+ K++ + K +LNP+ SDG++G + G PH P+ R+ + ++E ++ +
Sbjct: 750 TKFYSKKQGDSKFKLNPKKSDGLSGKVEKKEGYVPHEELKYPLERNGMPNLE---YDRSV 806
Query: 680 CAIYKLPD-AHKHVTRPPAGVIFPKKIVQLEDLK 712
Y +P + H + GV PK + D++
Sbjct: 807 SVYYDMPSVSQTHKSMLLRGVQLPKPALTQSDIQ 840
>gi|242774442|ref|XP_002478441.1| 5'->3' exoribonculease Dhp1 [Talaromyces stipitatus ATCC 10500]
gi|218722060|gb|EED21478.1| 5'->3' exoribonculease Dhp1 [Talaromyces stipitatus ATCC 10500]
Length = 1042
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 302/775 (38%), Positives = 430/775 (55%), Gaps = 74/775 (9%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFERE--GRKLPPKSD------SQVFDSNVITP 52
MNQQRSRRFR++++A ++ ++E ++ R+ + + P ++ + +DSNVITP
Sbjct: 111 MNQQRSRRFRSAQEARENDQKKEEFQKLLARQNAAKGIDPDNNLEEQVIKKTWDSNVITP 170
Query: 53 GTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYD 112
GT FM +LS +L+Y+I +LN DP WEK+K+I+SDA VPGEGEHK+M+++R QR P +D
Sbjct: 171 GTPFMDILSASLRYWISYKLNTDPAWEKLKIIISDATVPGEGEHKVMNFIRSQRQDPSHD 230
Query: 113 PNTRHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKA 171
PNTRH LYGLDADLIML LATHE HF +LRE V F + C LCGQ GH A C G+A
Sbjct: 231 PNTRHVLYGLDADLIMLGLATHEPHFRVLREDVFFQESKPRTCRLCGQTGHKAEECRGQA 290
Query: 172 KRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCF 231
K K GEFDEK V+ KP+ +L++ LREYL E ++P F DLE +DD++FMCF
Sbjct: 291 KEKNGEFDEKQKAAVL--KPFIWLNVSVLREYLAIELQVPQQRFPFDLERALDDWVFMCF 348
Query: 232 FVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYE 291
FVGNDFLPH+P+L+I+E AI+LL++++++ + Y+T + + + + +G E
Sbjct: 349 FVGNDFLPHLPSLDIKENAIDLLISIWRENIPLMDDYVTKDGIVNFKHAQLILTGLGKQE 408
Query: 292 DRIFQKRARLHQRHAERIKR----------EKAQARRGDDVEPLA-QPDSLVPVSR---- 336
+ IF++R + +R A +R E++Q RR + A +P P S+
Sbjct: 409 EAIFRRRRQAEERKAANEQRRKEEEKARNAERSQKRRRSSPDYTAGEPTIAAPPSKARKS 468
Query: 337 ---FHGSRLASGPSPS---------PYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGA 384
F S + +PS S V R K L S G
Sbjct: 469 GEGFIASTEVTLITPSRGHLDKETRQLTHSMVVNRSAIYKANEANKSAAAALKSQLLKGK 528
Query: 385 AIV--EAEN------SFETDPQENKEEFKAKL--KELLRDKSDAFN-------------- 420
V EAE+ S E Q+ + + K + D +DA N
Sbjct: 529 LAVNDEAESANSDGPSGEDTAQDESQGISPSVLGKRKVEDLADADNGTPGRDSPVPAGQS 588
Query: 421 --SDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEG 478
+D D V+L EPG+ ERYYE+KF+ E R V Y EGL WV+ YY +G
Sbjct: 589 KPTDEMPPDTVRLWEPGYTERYYEQKFHVDP--SNVEFRHQVARSYAEGLQWVLLYYMQG 646
Query: 479 VCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKL 538
SW W+YPYHYAPFASD D+ +F G PFKPF QL+GV P++S+HA+PE + L
Sbjct: 647 CPSWTWYYPYHYAPFASDFVDIGDMKPNFVKGKPFKPFEQLMGVLPASSNHAIPEIFHDL 706
Query: 539 MTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
M+DPNS I DFYP DF VD+NGK+++WQG+ LPFIDE RLL ++K L+ +E RN
Sbjct: 707 MSDPNSEIIDFYPEDFPVDLNGKKFAWQGVVLLPFIDEVRLLAAMEKKYPLLSADEHARN 766
Query: 599 SIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGD- 657
++ +D+L + HPL E K++V K +LN +S+G+ G +
Sbjct: 767 TVGSDVLLLSDQHPL------YQELAMNFYSKKQVVPKFKLNMRVSEGLAGKVERDDNHI 820
Query: 658 PHPPVFRSPVASMEDIMGNQVLCAIYKLPDA-HKHVTRPPAGVIFPKKIVQLEDL 711
PH + M + N+ + Y++P + H H + GV FP + D+
Sbjct: 821 PHSSLNPPYDVDMPSLDENRSMMVNYEIPKSTHLHKSMLLRGVRFPPPTLDQSDI 875
>gi|296813543|ref|XP_002847109.1| 5'-3' exoribonuclease 2 [Arthroderma otae CBS 113480]
gi|238842365|gb|EEQ32027.1| 5'-3' exoribonuclease 2 [Arthroderma otae CBS 113480]
Length = 1027
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 301/784 (38%), Positives = 426/784 (54%), Gaps = 110/784 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRK---------LPPKSDSQVFDSNVIT 51
MNQQRSRRFR+++DA AE+E+ + EF R +K + + ++ +D+NVIT
Sbjct: 111 MNQQRSRRFRSAQDAK---AEDEK-KVEFARLLKKQKRGKTDVTIAEEVITKTWDTNVIT 166
Query: 52 PGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGY 111
PGT FM +L++AL+Y++ +L+ DPGWEK+KVI+SDA VPGEGEHKIM ++R QR P Y
Sbjct: 167 PGTPFMDILALALRYWVAYKLSTDPGWEKLKVIISDATVPGEGEHKIMEFIRSQRACPEY 226
Query: 112 DPNTRHCLYGL------------DADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCG 158
DPNTRH +YGL DADLIML L THE HF +LRE V F + C LCG
Sbjct: 227 DPNTRHVIYGLVSDTNIYTSRLDDADLIMLGLGTHEPHFRVLREDVFFQESKARTCKLCG 286
Query: 159 QPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEID 218
Q GH+ C GKAK K GEFDEK + P KP+ +LH+ LREYL E ++P PF D
Sbjct: 287 QAGHVEEACTGKAKEKQGEFDEK--QKGSPLKPFIWLHVSILREYLAVEMQVPQQPFPFD 344
Query: 219 LECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLR 278
LE +DD++FMCFFVGNDFLPH+P+LEIRE I+ L+A+++ +GGYLT + L
Sbjct: 345 LERALDDWVFMCFFVGNDFLPHLPSLEIRENGIDTLIAIWRDNIPQMGGYLTKDGRVDLA 404
Query: 279 RVEHFIQAVGSYEDRIF---------------------QKRARLHQRHAERIKREKAQAR 317
+ + +Q + ED IF ++R + HA + +R A
Sbjct: 405 KAQLILQGLAKQEDAIFRRRRQTEERRNANAKRRQEEDRQRKNNNHEHARKRRRGSHGAE 464
Query: 318 RGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLS 377
D+ PL P G + E + +G + + + +
Sbjct: 465 PAPDIPPLVVP----------------GKGELTRAERELTHSMVVNRGAVYKANMANKSA 508
Query: 378 SGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEE----------- 426
+ A + D ++ E + L++ + KSD F + NP+
Sbjct: 509 AAALKAQLLSGGTAEDNADSEDVTEPAGSSLRK--KRKSDVFENSNPDTEAEEDTEAVLE 566
Query: 427 ---------DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLR------YTEGLCWV 471
D V+L E G+ +RYYE+KF RKD+ R Y EGL WV
Sbjct: 567 KPKEDEMPPDTVRLWEDGYADRYYEQKFKVD--------RKDIAFRHKVARAYVEGLSWV 618
Query: 472 MHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHAL 531
+ YY++G SW W+YPYHYAPFA+D D+ ++ F G PFKPF QL+GV P+AS+HA+
Sbjct: 619 LLYYFQGCPSWTWYYPYHYAPFAADFVDIGAMDVQFTKGIPFKPFEQLMGVLPAASNHAI 678
Query: 532 PEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLT 591
PE +R LM+D NS I DFYP DF VD+NGK+++WQG+A LPFIDE RLL + K L+
Sbjct: 679 PEVFRDLMSDENSEIIDFYPEDFPVDLNGKKFAWQGVALLPFIDEKRLLKAMDKRYPLLS 738
Query: 592 EEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI 651
EEE RN++ D+L + HPL S+ K++ K +LN +S+G+ G +
Sbjct: 739 EEEQARNAMGKDVLLLSEKHPLYESL------TANFYSKKQGSAKLKLNMRISEGLGGKV 792
Query: 652 SPCAG-DPHPPVFRS-PVASMEDIMGNQVLCAIYKLPDA-HKHVTRPPAGVIFPKKIVQL 708
PH + S A + + ++ + Y++P + H H + GV F + +
Sbjct: 793 EKNESYLPHSALSLSVDGADIPTLDEDRSISVYYEMPKSMHAHKSMLLRGVKFKEPALDK 852
Query: 709 EDLK 712
DL+
Sbjct: 853 TDLE 856
>gi|340992664|gb|EGS23219.1| hypothetical protein CTHT_0008830 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1066
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 309/750 (41%), Positives = 429/750 (57%), Gaps = 48/750 (6%)
Query: 1 MNQQRSRRFRASKDAADSAAEEER----LRQEFEREGRKLPPKSD-SQVFDSNVITPGTE 55
MNQQRSRRFRA+++A + E+++ LR+E ++ P ++ + FDSN ITPGT
Sbjct: 112 MNQQRSRRFRAAQEAKEKEEEKKQLLKMLRKEKGSNMQEEPLETVVKKAFDSNSITPGTP 171
Query: 56 FMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNT 115
FM +L+ +L+Y+ +LN DP W K+KVI+SDA VPGEGEHKIM ++R QR+ P ++PNT
Sbjct: 172 FMDILAASLRYWCAYKLNTDPAWAKLKVIISDATVPGEGEHKIMEFIRSQRSSPEHNPNT 231
Query: 116 RHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRK 174
RH +YGLDADLIML LATHE HF +LRE V F + C LCGQ GH +C+G+AK+K
Sbjct: 232 RHVIYGLDADLIMLGLATHEPHFRVLREDVFFQEAKARLCKLCGQKGHDERSCKGEAKQK 291
Query: 175 AGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVG 234
GEFDEK + P KP+ +LH+ LREYL E +PN PF DLE +DD++F+CFFVG
Sbjct: 292 QGEFDEK--DHAQPLKPFIWLHVSILREYLAAELEVPNLPFRWDLERAIDDWVFLCFFVG 349
Query: 235 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI 294
NDFLPH+P LEIRE I+ L A++K +GGYLT L R ++ + + ED I
Sbjct: 350 NDFLPHLPALEIRENGIDTLTAIWKDNLPIMGGYLTKDGHVDLERAQYILNGLAKQEDAI 409
Query: 295 FQKRARLHQRHAERIKREK-----AQARRGDDVEPLAQ-----PDSLVPVSRFHGSRLAS 344
F++R + +R KR K A A+ D P++ P+ + +
Sbjct: 410 FRRRREVEERREANAKRRKLNQQGAHAKGAADSHAGKSGRKHVPEAAGPLPGMALFPITN 469
Query: 345 GPSPSPYQQSECVGR------LDNGKGTSGRPHKV-PRLSSGATIGAAIVEAENSFETDP 397
P P+ GR L N S ++ ++ A A E + S +
Sbjct: 470 PPPPAITHDMVMKGRSVDQANLANKSAASVLKSQIQSMMAQKAATNANGAEKDVSADGTT 529
Query: 398 QENKEEFKAKLKELLRDK----------SDAFNSDNP-EEDKVKLGEPGWKERYYEEKFN 446
+ EL+ + +D SDN D V+L E G+ +RYYE+KF
Sbjct: 530 TAPASALGKRKAELIEEDAATNTDTDSVTDGTGSDNEGPVDTVRLWEEGYADRYYEQKF- 588
Query: 447 AKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNIS 506
K + E R V Y EGL WV+ YYY+G SW+WFYPYHYAPFA+D DL + I
Sbjct: 589 -KVDPKDIEFRHKVGRAYAEGLAWVLQYYYQGCPSWEWFYPYHYAPFAADFVDLAKMEIK 647
Query: 507 FELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQ 566
FE G +PF QL+ V P+AS HA+PE Y LMTDPNSPI DFYP +FE+D+NGK+ +WQ
Sbjct: 648 FEKGRISRPFEQLMSVLPAASRHAIPEVYHDLMTDPNSPIIDFYPEEFEIDLNGKKMAWQ 707
Query: 567 GIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQ 626
G+A LPFI+ RLL +K+ EH L+EE+ RN D+L + +HP +Y ++
Sbjct: 708 GVALLPFIEMPRLLAAMKEREHLLSEEDRARNEPGFDVLLISDAHP---GLY--EDITSH 762
Query: 627 LKIKERVEVKERLNPELSDGMNGYISPCAG-DPHPPVFRSPVA--SMEDIMGNQVLCAIY 683
K++ K +LNP SDG+ G + G PH + P+A SM D+ ++ + Y
Sbjct: 763 FYSKKQGAPKFKLNPRRSDGLAGKVEKIEGYVPHGSLV-YPLARNSMPDVDYDRSITVRY 821
Query: 684 KLP-DAHKHVTRPPAGVIFPKKIVQLEDLK 712
+P AH+H + GV P + D++
Sbjct: 822 IMPSSAHQHKSMLLRGVKLPPPALSRSDIE 851
>gi|170593371|ref|XP_001901438.1| 5'-3' exoribonuclease 2 [Brugia malayi]
gi|158591505|gb|EDP30118.1| 5'-3' exoribonuclease 2, putative [Brugia malayi]
Length = 937
Score = 511 bits (1315), Expect = e-141, Method: Compositional matrix adjust.
Identities = 306/715 (42%), Positives = 404/715 (56%), Gaps = 47/715 (6%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+A + + R E EG LPP+ ++ FDSN ITPGT FMA L
Sbjct: 111 MNQQRSRRFRASKEAIEKVEQIAETRLRLESEGYPLPPEKKTEHFDSNCITPGTPFMARL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
++AL+YY+H RLN+DPGW KI VILSDANVPGEGEHKIM ++R QR P +DPNT HCL
Sbjct: 171 AVALRYYVHQRLNSDPGWRKIAVILSDANVPGEGEHKIMDFIRRQRASPSHDPNTVHCLC 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P QQ C LCGQ GH +C+G A E
Sbjct: 231 GADADLIMLGLATHEPNFNIIRE-EFVPNQQRPCDLCGQYGHGLNDCKGLASDDNSECQS 289
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
+ + + F+ + LREYL+ E IPN DLE +DD++FMCFFVGNDFLPH
Sbjct: 290 TP---LQKETNFIFIRLPVLREYLERELHIPNCSIPFDLERAIDDWVFMCFFVGNDFLPH 346
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIRE AI+ L+ +YK + G+LTD + R + + +G ED IF+ R
Sbjct: 347 LPSLEIRENAIDRLVKLYKDMVCEMKGHLTDSGIVHIERAQIILDKLGEVEDEIFKSRQE 406
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRL 360
Q+ R K +K + + LA P S +P S +GP + + R
Sbjct: 407 REQQFKRRNKEKKWRE------QALATP-SYIPSRGSLLSPQTNGPMYLSGSSTRTMART 459
Query: 361 DNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFN 420
+ R + AT V A N E D ++K+E K N
Sbjct: 460 ARLEALDFTETVHTRAMNNATFH---VPAINISEKD--DHKQELKN-------------N 501
Query: 421 SDNPEE--DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEG 478
S + +E D+V+L E GWK+RYY+ KF + R+ V L Y EGLCWV+HYYY+G
Sbjct: 502 SSSEDEVFDEVRLWEDGWKDRYYKSKFQVDGKD--IVFRRKVALAYVEGLCWVLHYYYQG 559
Query: 479 VCSWQWFYPYHYAPFASDLKDLDQFNISFE-LGHPFKPFNQLLGVFPSASSHALPEHYRK 537
SW W+YP+HYAPFASD + QF F PFKP QL+ VFP+AS LPE +++
Sbjct: 560 CASWDWYYPFHYAPFASDFDAVSQFKPDFSAYTEPFKPLQQLMSVFPAASRMHLPEAWQE 619
Query: 538 LMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARR 597
LM P SPI DFYP +F +D+NGK+ +WQG+A LPF+DE RLL+ + +E L E R
Sbjct: 620 LMISPVSPIIDFYPDNFVIDLNGKKCAWQGVALLPFVDEKRLLEVLNPMEDKLDAFEKER 679
Query: 598 NSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGD 657
NS D LFV SHP TL E+ + K+ ++ ++ L+ GM G + A
Sbjct: 680 NSRGPDRLFVGPSHPFYNFAETLYENSR----KDSTDLA--IDTSLTFGMAGTVGVDAKA 733
Query: 658 PHP-PVFRSPVASME--DIMGNQVLCAIYKLPDAHK----HVTRPPAGVIFPKKI 705
++SP++ E DI N+ + IYK P K R P V P+ +
Sbjct: 734 VMKGQNYKSPLSVDEFTDIAKNKAIMMIYKDPQFEKGYVFAAKRLPGAVDVPRTL 788
>gi|340714666|ref|XP_003395847.1| PREDICTED: 5'-3' exoribonuclease 2 homolog [Bombus terrestris]
Length = 946
Score = 510 bits (1314), Expect = e-141, Method: Compositional matrix adjust.
Identities = 334/891 (37%), Positives = 467/891 (52%), Gaps = 97/891 (10%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAV 59
MNQQRSRRFRASK+ + E +R+R E +G LPP K FDSN ITPGT FMA
Sbjct: 111 MNQQRSRRFRASKETIEKVNEIKRIRSELILKGVSLPPEKPKEDHFDSNCITPGTPFMAR 170
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
LS L YYIH RLNNDPGW IKVILSDANVPGEGEHKIM ++R QR P +DPNT+H L
Sbjct: 171 LSKCLHYYIHDRLNNDPGWRNIKVILSDANVPGEGEHKIMDFIRKQRAQPDHDPNTQHVL 230
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
G DADLIML LATHE +F+I+RE F P + C +CGQ GH +C G + E D
Sbjct: 231 CGADADLIMLGLATHEPNFTIIREE-FKPNKPKPCDICGQLGHEMQDCTGAEANQGDETD 289
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
G E Y F+ + LREYL+ E ++PN PF+ D E ++DD++FMCFFVGNDFLP
Sbjct: 290 TFGSEC-----QYIFVRLNVLREYLERELQMPNLPFKYDFERVIDDWVFMCFFVGNDFLP 344
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIREGAI+ L+ +YKK GG+LTD +L RV+ + +G ED IF++R
Sbjct: 345 HLPSLEIREGAIDRLVNLYKKAVYKTGGFLTDSGDVNLDRVQLIMSELGEVEDEIFKRRQ 404
Query: 300 RLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGR 359
+ + +R K +K + +P +P+ +F +R+ SP + E
Sbjct: 405 QNELAYKQREKDKKKLLLGISNKKP-----KWIPMGQFAPTRIGEHVSPVQNARYEAYEM 459
Query: 360 LDNGKG--TSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSD 417
G+ TS R S + +++ ENS ++ + R+ +
Sbjct: 460 RVRGQNYHTSAR--------SSQKMLESMMRPENS------------TNQITKRRREPVE 499
Query: 418 AFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYE 477
+ D+ D+V+L E G+K+RYYE KF+ + R +V L+Y GLCWV+ YYY+
Sbjct: 500 DDSDDDQVHDEVRLWEDGFKDRYYESKFDVSP--DNLAFRNNVALQYVRGLCWVLRYYYQ 557
Query: 478 GVCSWQWFYPYHYAPFASDLKDLDQFNISFELGH-PFKPFNQLLGVFPSASSHALPEHYR 536
G SW+W++PYHYAPFASD ++ + FE G PF+P QL+GVFP+ASS +P +
Sbjct: 558 GCASWKWYFPYHYAPFASDFINIGGLSTEFEKGTTPFRPLEQLMGVFPAASSKHIPAPWA 617
Query: 537 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 596
KLM DP SPI DFYP DF++D+NGK+++WQGIA LPF+DE RL ++ LTE E +
Sbjct: 618 KLMIDPRSPIIDFYPEDFKIDLNGKKFAWQGIALLPFVDEKRLFKALEPYYDCLTEAEKK 677
Query: 597 RNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI---SP 653
RN + L+V L + I L + + ++ + D M G +
Sbjct: 678 RNVEGDNRLYVGLGNSGYNFIKGLYTNHVLFDAETQICI---------DNMRGIVLLADD 728
Query: 654 CAGDPHPPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPP---AGVIFPKKIVQLED 710
C GD SP+ + + N+V CA ++ P P GV P ++++ +D
Sbjct: 729 CVGDG--ATLPSPINGLP-VRNNKVYCARFRDPKYSSSFIFPARKLKGVREPPRVLKPQD 785
Query: 711 LKPAPVLWHEDSGRRPHENGRHNPHGTISGRQLGEAAHRLVANSLQHMKVDRNGYGDRMH 770
+ ++G P ++ L +A R++ + H +
Sbjct: 786 FDQM----NRNTGNTWKPQIGFTPSTQVA--TLNDAGRRILRHYTNH------------N 827
Query: 771 GSPLPYAAAPYVPPVPSYQEYGVYDQGYNRFS-QPRTDSYPAGHSQSSISAAQPPYDGGY 829
G P PY PV Q GY Q R +S AG SQ ++ P+ GY
Sbjct: 828 GVPPPYN------PVSIPQSLYPAHHGYRSTDYQGRYES--AGSSQFAMMPG--PWARGY 877
Query: 830 S-----QHYAS-------NTSHHPNRRYH-PQYDRNSSGEHPTHLYNPSGI 867
Q Y+ N + YH PQY+ S + Y+P+
Sbjct: 878 GTPHNYQQYSEYQQRNNYNAQQYGRNNYHNPQYNSYGSQYNQQRNYSPNYQ 928
>gi|346979187|gb|EGY22639.1| 5'-3' exoribonuclease [Verticillium dahliae VdLs.17]
Length = 1013
Score = 510 bits (1313), Expect = e-141, Method: Compositional matrix adjust.
Identities = 302/764 (39%), Positives = 420/764 (54%), Gaps = 76/764 (9%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFERE-GRKLPPKS----DSQVFDSNVITPGTE 55
MNQQRSRRFR++++A + +++ L + +++ G LPP++ + + FDSN ITPGT
Sbjct: 112 MNQQRSRRFRSAQEAQEKEVDKQELLKLLKQQNGGILPPETLESMNKKAFDSNSITPGTP 171
Query: 56 FMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNT 115
FM L+ +L+Y+ +LN DP W ++K+I+SDA VPGEGEHKIM+YVR QR P YDPNT
Sbjct: 172 FMDTLATSLRYWCAYKLNTDPAWARLKIIISDATVPGEGEHKIMNYVRSQRGSPDYDPNT 231
Query: 116 RHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKRK 174
RH +YGLDADLIML LATHE HF +LRE VF + K C +CGQ GH A C+G+AK K
Sbjct: 232 RHVIYGLDADLIMLGLATHEPHFRVLREDVFAQDAKAKMCKICGQKGHDARVCKGEAKDK 291
Query: 175 AGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVG 234
GE+DE+ + V KP+ +LH+ REYL E +P+ PF DLE +DD++FMC FVG
Sbjct: 292 DGEYDEQ--DKAVDLKPFIWLHVSIFREYLAIELDVPDLPFRFDLERAIDDWVFMCCFVG 349
Query: 235 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI 294
NDFLPH+P LEIRE I+ L ++K+ +GGY+T L+RV+ + + ED I
Sbjct: 350 NDFLPHLPALEIRENGIDALTTIWKENLPRMGGYVTKDGHIDLKRVQLIMDGLAKQEDAI 409
Query: 295 FQKRARLHQRHAERIKREKAQ------------ARRGDDVEPLAQPDS---LVPVSRFHG 339
F++R R KR K Q + RG PL S L PVS F
Sbjct: 410 FRRRKEQEDRREANAKRRKLQDERSGRGGRTDASGRGRGKPPLDNASSGLALFPVSGFPN 469
Query: 340 SRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVP------RLSSGATIGAAIV-EAENS 392
+ PS VGR N + +K R+ + T G + +A
Sbjct: 470 A------DPSAVTHDMVVGRSSNANINANAANKSAANVIRERIQASGTQGKSTNGDATIH 523
Query: 393 FETDPQENKEEFKAKLKELLRDKSDAFN-------------SDNPEEDKVKLGEPGWKER 439
+ EE A +++ K+D + ++ D V++ E G+ +R
Sbjct: 524 PNVEAPAVPEEGAAAASSVVKRKADVLDEPSQLTPNTGPSAAEEAAIDHVRMWEEGYADR 583
Query: 440 YYEEKFNAKTPEEREETRKDVVLR------YTEGLCWVMHYYYEGVCSWQWFYPYHYAPF 493
YYE+KF+ R DV R Y EGLCWV+ YYY+G SW W+YPYHYAPF
Sbjct: 584 YYEQKFHVD--------RNDVAFRHKVAQAYVEGLCWVLLYYYQGCPSWDWYYPYHYAPF 635
Query: 494 ASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTD 553
A+D DLD+ ISFE G KPF QL+ V P+AS ALPE + LM + +S + DFYP +
Sbjct: 636 AADFADLDKIEISFEKGRISKPFEQLMSVMPAASRRALPEVFHDLMLNEDSEVIDFYPQE 695
Query: 554 FEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPL 613
FE+D+NGK+++WQG+A LPFID RLL V+K L+ E+A RN I D+L + +H
Sbjct: 696 FEIDLNGKKFAWQGVALLPFIDMPRLLAAVEKKYPLLSPEDAARNGIGRDVLLLSDAH-- 753
Query: 614 SASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCA-----GDPHPPVFRSPVA 668
+Y ++ K++ LNP SDGM G + A G P+ R
Sbjct: 754 -HELY--EDITSHFYSKKQGAPTFGLNPRTSDGMTGQVEKIADYLPHGSLEYPLDRK--- 807
Query: 669 SMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLK 712
SM + ++ L Y+ P H + G+ P + D++
Sbjct: 808 SMPSLDYDRSLSVYYEFPTTAPHKSMLLRGLKMPTTALGRSDIE 851
>gi|195038968|ref|XP_001990842.1| GH18033 [Drosophila grimshawi]
gi|193895038|gb|EDV93904.1| GH18033 [Drosophila grimshawi]
Length = 873
Score = 510 bits (1313), Expect = e-141, Method: Compositional matrix adjust.
Identities = 293/735 (39%), Positives = 407/735 (55%), Gaps = 71/735 (9%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAV 59
MNQQRSRRFRA+K+A + E ER+R E G KLPP K + FDSN ITPGT FM
Sbjct: 112 MNQQRSRRFRAAKEATEKRLEIERIRDELLTRGCKLPPEKEKGEHFDSNCITPGTPFMDR 171
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
LS L YYIH RLNN+P W+ +K+ILSDANVPGEGEHKIM Y+R QR P +DPNT H L
Sbjct: 172 LSKCLHYYIHDRLNNNPAWKGVKIILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTHHVL 231
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
G DADLIML LATHE +F+I+RE F P + C +C Q GH C G + + +
Sbjct: 232 CGADADLIMLGLATHEPNFTIIRE-EFLPNKPRPCDVCNQFGHEMDKCVGLSAVGSNNIN 290
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
D + + + F+ + LREYL +PN PF D E +DD++FMCFFVGNDFLP
Sbjct: 291 SPPDVPIGAEVKFIFVRLSVLREYLRKTLEMPNLPFSYDFERALDDWVFMCFFVGNDFLP 350
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIREGA++ L+ +YKK YLT+ SL RV+ + +G+ ED+IF+ R
Sbjct: 351 HLPSLEIREGAVDRLVELYKKCVYKARDYLTNSGDVSLDRVQLIMTDLGNVEDQIFKDRQ 410
Query: 300 RLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGR 359
R Q++ R KRE +A P+A + V + + Y+Q R
Sbjct: 411 RREQQYKARQKRENHKALEQSAFGPMAVGRNNAAVDKIITN----------YKQEASAVR 460
Query: 360 L--DNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSD 417
+ ++ +GT R S+ A + A D +EN
Sbjct: 461 MGSNDSQGTK-------RSSTNANLDDA----------DEEENN---------------- 487
Query: 418 AFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYE 477
D+V+L E G+K RYYE KF+ + + R V L+Y GLCWV+ YYY+
Sbjct: 488 ---------DEVRLWEDGFKNRYYESKFDVAS--GNLQFRYAVALQYVRGLCWVLKYYYQ 536
Query: 478 GVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYR 536
G SW W++PYHYAPFASD ++ + +FE G PF P QL+GVFP+ASS +PE +
Sbjct: 537 GCASWNWYFPYHYAPFASDFVNIQGLSTTFEKGTKPFNPLEQLMGVFPAASSSHVPEPWA 596
Query: 537 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 596
+LM+ P S I DFYP DF++D+NGK+++WQG+A LPF+DE RL + + LT+EE +
Sbjct: 597 QLMSKPESTIIDFYPEDFKIDLNGKKFAWQGVALLPFVDENRLFKALGPLHIQLTDEEVQ 656
Query: 597 RNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPC-A 655
RN + L++ P +I L E ++K +P DGM G IS
Sbjct: 657 RNKRGDNNLYISKCSPHFKTINKLYEAGDNSQLKN--------SPSSFDGMTGTISKSEI 708
Query: 656 GDPHPPVFRSPVASMEDIMGNQVLCAIYKLP---DAHKHVTRPPAGVIFPKKIVQLEDLK 712
+SP+ + DIM N+V+ ++ P D + + + P +++Q D K
Sbjct: 709 NTALNGQLKSPIPGLPDIMNNEVVTTVFMDPQYEDNYNFLAIRLPNAVDPPQVIQANDHK 768
Query: 713 PAPVLWHEDSGRRPH 727
PV+ ++ +R +
Sbjct: 769 NGPVIGFGNNSQRAY 783
>gi|347837816|emb|CCD52388.1| similar to 5'-3' exoribonuclease 2 [Botryotinia fuckeliana]
Length = 966
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 281/688 (40%), Positives = 399/688 (57%), Gaps = 56/688 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR++++A + A ++ L + + +G + + +DSN ITPGT FM +L
Sbjct: 111 MNQQRSRRFRSAQEAKEKAEDKAELLKMLKSQGSHIEETEVKKAWDSNEITPGTPFMDIL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+++L+Y+I +LN DP W K+KVI+SD+ VPGEGEHKIM +VR QR+ P ++PNTRH +Y
Sbjct: 171 ALSLRYWIAYKLNTDPAWAKMKVIISDSTVPGEGEHKIMEFVRSQRSSPDHNPNTRHVMY 230
Query: 121 GLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADLIML LATHE HF ILRE V F G+ C LCGQ GH A C+G K K GEFD
Sbjct: 231 GLDADLIMLGLATHEPHFRILREDVFFNDGKPRTCKLCGQHGHEARECKGMYKIKDGEFD 290
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
EK + KP+ +LH+ LREYL E +P+ PF DLE +DD++FMCFFVGNDFLP
Sbjct: 291 EKASAPTL--KPFIWLHVSVLREYLAAEMYVPSQPFRFDLERALDDWVFMCFFVGNDFLP 348
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIRE IN L+A+++ +GGYLT L R + + + ED IF+KR
Sbjct: 349 HLPSLEIREDGINTLIAIWRDNIPYMGGYLTKDGHVDLERAQFILDGLAKQEDAIFRKRR 408
Query: 300 RLHQ--RHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPY------ 351
+ + + ++ E+ RG++ P P ++G + G +P+
Sbjct: 409 KNEENFQKKRKLNNERNARGRGNNGGPQDSP--------YNGRQPPGGAAPTGLPLFTPG 460
Query: 352 -QQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETD----PQENKEEFKA 406
E + G +K + A AA+ E N D P+ + ++
Sbjct: 461 VANKEAKAMTHDMVMNRGAAYKASIANKSA--AAALKEMMNGKSADDNGEPKADDTSAES 518
Query: 407 KLKELLRDKSDAFNSDNPEE-----------------------DKVKLGEPGWKERYYEE 443
L + K++ D+ D V+L E G+ +RYYE+
Sbjct: 519 PATALGKRKAELIEDDDSSTPGRNTPASGTPGTPTTPGDDLPPDTVRLWEDGYADRYYEQ 578
Query: 444 KFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQF 503
KFN + P++ E R +V Y EGL WV+ YY++G SW W+YPYHYAPFA+D +L
Sbjct: 579 KFN-RDPKDI-EFRHEVGRAYVEGLAWVLLYYFQGCPSWDWYYPYHYAPFAADFANLKDM 636
Query: 504 NISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRY 563
I F+ G F+PF QL+GV P+AS A+PE + LMT+ +S I DFYP DF VD+NGK++
Sbjct: 637 KIDFQKGRIFRPFEQLMGVLPAASRQAIPEQFHHLMTNEDSEIIDFYPEDFVVDLNGKKF 696
Query: 564 SWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEH 623
+WQG+A LPFID RLLD + K+ TL E+ + RN + D+L V +H +Y DE
Sbjct: 697 AWQGVALLPFIDSERLLDAMAKVYPTLPEDVSARNGLGRDVLLVSEAH---HDLY--DEI 751
Query: 624 CKQLKIKERVEVKERLNPELSDGMNGYI 651
+ K++ +LNP++S+G+ G I
Sbjct: 752 TSKFYSKKQDAPHMKLNPKVSEGLTGRI 779
>gi|212531981|ref|XP_002146147.1| 5'->3' exoribonculease Dhp1 [Talaromyces marneffei ATCC 18224]
gi|210071511|gb|EEA25600.1| 5'->3' exoribonculease Dhp1 [Talaromyces marneffei ATCC 18224]
Length = 1042
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 290/765 (37%), Positives = 424/765 (55%), Gaps = 78/765 (10%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFERE--GRKLPPKSD------SQVFDSNVITP 52
MNQQRSRRFR++++A ++ ++E ++ ++ + + P D + +DSNVITP
Sbjct: 111 MNQQRSRRFRSAQEARENDQKKEEFQKLLVKQNAAKGIDPDKDIKEQVIQKTWDSNVITP 170
Query: 53 GTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYD 112
GT FM +LS +L+Y+I +LN DP WEK+K+I+SDA VPGEGEHK+M+++R QR P +D
Sbjct: 171 GTPFMDILSASLRYWISYKLNTDPAWEKMKIIISDATVPGEGEHKVMNFIRSQRQDPSHD 230
Query: 113 PNTRHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKA 171
PNTRH LYGLDADLIML LATHE HF +LRE V F + C LCGQPGH A C G+A
Sbjct: 231 PNTRHVLYGLDADLIMLGLATHEPHFRVLREDVFFQESRPRTCRLCGQPGHKAEECRGEA 290
Query: 172 KRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCF 231
K K GEFDEK + P KP+ +L++ LREYL E ++P F DLE +DD++FMCF
Sbjct: 291 KEKNGEFDEK--QKAAPLKPFIWLNVSVLREYLAVELQVPQQRFPFDLERALDDWVFMCF 348
Query: 232 FVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYE 291
FVGNDFLPH+P+L+I+E AI+LL++++++ + Y+T + + + +G E
Sbjct: 349 FVGNDFLPHLPSLDIKENAIDLLISIWRENIPLMDDYVTKDGIVNFNHAQLILNGLGKQE 408
Query: 292 DRIFQKRARLHQRHA--ERIKREKAQARRGDDVEP--LAQPD------------------ 329
D IF++R + +R A E+ ++E+ +AR + + + PD
Sbjct: 409 DGIFRRRRQAEERKAANEQRRKEEEKARNAERSQKRRRSSPDYTAGEAGLSAPPAKGRKS 468
Query: 330 ----------SLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSG 379
+L+ SR H + + S + + + ++ K L
Sbjct: 469 GEGFIASTEVTLITPSRGHLDKETRQLTHSMVVNRSAIYKANEANKSAAAALKSQLLKGK 528
Query: 380 ATIGAAIVEAENSFETDPQENKEEFKAKL-KELLRDKSDAFN----------------SD 422
A + + +E+ E + L K + D +DA N SD
Sbjct: 529 VPTNAETETTNSEIPSGEEESLETSPSVLGKRKVEDLTDADNGTPGRDSPVAAGPAKPSD 588
Query: 423 NPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSW 482
D V+L E G+ ERYYE+KF+ E R V Y EGL WV+ YY +G SW
Sbjct: 589 ELPPDTVRLWESGYTERYYEQKFHVDP--SNVEFRYQVARSYAEGLQWVLLYYMQGCPSW 646
Query: 483 QWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDP 542
W+YPYHYAPFA+D D+ SFE G PF+PF QL+GV P++S+HA+PE + LM+DP
Sbjct: 647 TWYYPYHYAPFAADFVDIGSMKPSFEKGKPFRPFEQLMGVLPASSNHAIPEIFHDLMSDP 706
Query: 543 NSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMA 602
NS I DFYP DF VD+NGK+++WQG+ LPFIDE RLL ++K L+ +E RN++
Sbjct: 707 NSEIIDFYPEDFPVDLNGKKFAWQGVVLLPFIDETRLLAAMEKKYPLLSADEHARNTVGT 766
Query: 603 DMLFVLLSHP----LSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGD- 657
D+L + HP L+A+ Y+ + + + RV S+G+ G +
Sbjct: 767 DVLLISDQHPLYQELAANFYSKKQSTSKFALDMRV----------SEGLAGKVERDDNHI 816
Query: 658 PHPPVFRSPVASMEDIMGNQVLCAIYKLPDA-HKHVTRPPAGVIF 701
PH + M + N+ + Y++P + H H + GV F
Sbjct: 817 PHSSLDPPYDVDMPSLDENRSMMVNYEIPKSTHLHKSMLLRGVRF 861
>gi|326479818|gb|EGE03828.1| hypothetical protein TEQG_02862 [Trichophyton equinum CBS 127.97]
Length = 1035
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 291/671 (43%), Positives = 401/671 (59%), Gaps = 73/671 (10%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEF------EREGRK---LPPKSDSQVFDSNVIT 51
MNQQRSRRFR+++DA AE+E+ + EF ++ G+K + + ++ +D+NVIT
Sbjct: 111 MNQQRSRRFRSAQDAK---AEDEK-KVEFAKLLKKQKRGKKDVTVAEEVITKTWDTNVIT 166
Query: 52 PGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGY 111
PGT FM +L++AL+Y++ +L+ DPGWEK+KVI+SDA VPGEGEHKIM ++R QR P Y
Sbjct: 167 PGTPFMDILALALRYWVAYKLSTDPGWEKLKVIISDATVPGEGEHKIMEFIRSQRACPEY 226
Query: 112 DPNTRHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGK 170
DPNTRH +YGLDADLIML L THE HF +LRE V F + C LCGQ GH+ C GK
Sbjct: 227 DPNTRHVIYGLDADLIMLGLGTHEPHFRVLREDVFFQESKARTCKLCGQAGHVEEACTGK 286
Query: 171 AKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMC 230
AK K GEFDEK + P KP+ +LH+ LREYL E ++P PF DLE +DD++FMC
Sbjct: 287 AKEKRGEFDEK--QKGNPLKPFIWLHVSVLREYLAVEMQVPQQPFPFDLERALDDWVFMC 344
Query: 231 FFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSY 290
FFVGNDFLPH+P+LEIRE I+ L+A+++ +GGYLT + L + + +Q +
Sbjct: 345 FFVGNDFLPHLPSLEIRENGIDTLIAIWRDNIPQMGGYLTKDGRVDLAKAQLILQGLAKQ 404
Query: 291 EDRIFQKRARLHQRHAERIK-----------------REKAQARRGDDVEPLAQPDSLVP 333
ED IF++R + +R K R+K + RG EP+ LV
Sbjct: 405 EDAIFRRRRQTEERRNANAKRRQEEDRQRRNNNNEHARKKRRGSRG--AEPVPDIPPLVI 462
Query: 334 VSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSG-ATIGAAIVEAENS 392
+ SR + + V + + ++ K LS G A +GA ++S
Sbjct: 463 PGKGELSRAERELTHAMVVNRGAVYKANMANKSAAAALKAQLLSGGTAEVGADATNTQDS 522
Query: 393 FETDPQENKEEFKAKLKELLRDKSDAFNSDN---------------------PEEDK--- 428
+ +K L + KSDAF + N P+ED+
Sbjct: 523 APSGIPGSK---------LGKRKSDAFENSNTEAEAEEEDEEEEETVEVPAKPKEDEMPP 573
Query: 429 --VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFY 486
V+L E G+ +RYYE+KF +P++ R V Y EGL WV+ YY++G SW W+Y
Sbjct: 574 DTVRLWEDGYADRYYEQKFGV-SPKDI-AFRHKVARAYVEGLSWVLLYYFQGCPSWTWYY 631
Query: 487 PYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPI 546
PYHYAPFA+D D+ + ++ F G PFKPF QL+GV P+AS+HA+PE +R LM+D NS I
Sbjct: 632 PYHYAPFAADFVDIGEMDVQFTKGTPFKPFEQLMGVLPAASNHAIPEVFRDLMSDENSEI 691
Query: 547 SDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 606
DFYP DF VD+NGK+++WQG+A LPFIDE RLL + K H L+EEE RN++ D+L
Sbjct: 692 IDFYPEDFPVDLNGKKFAWQGVALLPFIDEKRLLAAMDKRYHLLSEEEQARNAMGKDVLL 751
Query: 607 VLLSHPLSASI 617
+ HPL S+
Sbjct: 752 LSEKHPLYESL 762
>gi|391327300|ref|XP_003738141.1| PREDICTED: 5'-3' exoribonuclease 2 homolog [Metaseiulus
occidentalis]
Length = 960
Score = 507 bits (1306), Expect = e-140, Method: Compositional matrix adjust.
Identities = 341/871 (39%), Positives = 451/871 (51%), Gaps = 93/871 (10%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAV 59
MNQQRSRRFRASK+AA+ AA RLR+E + +G LPP K+ FD+N ITPGT FM
Sbjct: 112 MNQQRSRRFRASKEAAEKAATISRLRRELQSKGFHLPPEKAPEDHFDTNCITPGTPFMDR 171
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
L+ L YYIH RLNNDPGW+ I+VILSDANVPGEGEHKIM ++R QR P +DPNTRHCL
Sbjct: 172 LAKCLHYYIHDRLNNDPGWQNIEVILSDANVPGEGEHKIMDFIRKQRASPSHDPNTRHCL 231
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
G DADLIML LATHE +F+I+RE F P Q C LCGQ GH +C G K A +
Sbjct: 232 CGADADLIMLGLATHEPNFTIIRE-EFKPNQPRPCELCGQIGHEMKDCMGLPKDIASQ-- 288
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
K ++ + + + F+ + L+EYL E I PF+ +E +DD++F+CFFVGNDFLP
Sbjct: 289 TKIEKPLGAETEFIFIRLNVLKEYLTKELWIEGLPFKWSIERAIDDWVFLCFFVGNDFLP 348
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIREGAI+ L+ +YK+ YLT + + +G ED IF++R
Sbjct: 349 HLPSLEIREGAIDRLVRIYKETIHVKKDYLTKNGFAQMDHCAMILTKLGQAEDEIFRQR- 407
Query: 300 RLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGR 359
Q E+ KR + L+ + VS + L Q
Sbjct: 408 ---QIDEEKFKRRQKVGESRCTPLTLSSSGRIDSVSAWDSRLLTIDYRDEVLSQRRSA-- 462
Query: 360 LDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAF 419
+D +G G P A++E E + P + K A
Sbjct: 463 MDFSRGLHGGPGI-----------EAMLEPEGGAQGQPAKRK----------------AE 495
Query: 420 NSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGV 479
+ D ED+V+L E GWKERYYE KF E + R +V Y EGLCWV+HYYY+G
Sbjct: 496 DLDEEPEDEVRLWEVGWKERYYESKFEVSP--ENQSFRHEVAAAYAEGLCWVLHYYYQGC 553
Query: 480 CSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKL 538
SW+WF+PYHYAPFASD ++ ISFE PF P QL+ VFP+AS LPE + L
Sbjct: 554 ASWKWFFPYHYAPFASDFSEIGTLKISFEKNTKPFNPMEQLMSVFPAASRQHLPEPWGDL 613
Query: 539 MTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
M DP SPI DFYP DF +D+NGK+ +W G+A LPF+DE RLL+ V + LT EE RRN
Sbjct: 614 MEDPESPIIDFYPIDFRIDLNGKKAAWMGVALLPFVDEKRLLETVATVYDRLTPEEKRRN 673
Query: 599 SIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNG-YISPCAGD 657
S +F+ +HP + L E+ Q K+ + E + ++PE GM G ++
Sbjct: 674 SRGDSYIFIRKNHPGYPFLRGLYENKSQRKLND--ENVQPIDPESFFGMAGNALTTDKMV 731
Query: 658 PHPPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPA---GVIFPKKIVQLEDLKPA 714
P SPV + N V+ ++ P P G I P+K+++ EDL
Sbjct: 732 PEKEKVLSPVKGCQPCPNNMVVVTRWRDPIFEPDFIYPATKLPGAIEPEKVLRPEDL--- 788
Query: 715 PVLWHEDSGRRPHENGRHNPHGTISGRQLGEAAHRLVANSLQHMKVDRNGYGDRMHGSPL 774
+ + RP N LG + HR++ + H + +G G
Sbjct: 789 --VGDQSRQWRPQVGMARNTQRA----SLGASGHRMINH---HAAIPPPSHGGWQRG--- 836
Query: 775 PYAAAPYVPPVPSYQEYGVYDQGYNRFSQPRTDSYPAGHSQSSISAAQPPYDG--GYSQH 832
AP + G ++QGY R DSY G YDG YS H
Sbjct: 837 ---CAP---------QRGNFNQGYQR------DSYGQG------------YDGYNNYSTH 866
Query: 833 YASNTSHHPNRRYHPQYDRNSSGEHPTHLYN 863
S+ RY QYDR+S G + YN
Sbjct: 867 SNPQRSYQDRGRYGQQYDRSSYGSSNRNSYN 897
>gi|332021133|gb|EGI61520.1| 5'-3' exoribonuclease 2-like protein [Acromyrmex echinatior]
Length = 867
Score = 507 bits (1305), Expect = e-140, Method: Compositional matrix adjust.
Identities = 300/721 (41%), Positives = 419/721 (58%), Gaps = 50/721 (6%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAV 59
MNQQRSRRFRA+K++ + E ER+R E +G LPP KS + FDSN ITPGT FMA
Sbjct: 111 MNQQRSRRFRAAKESTEKINEIERIRSELTLKGASLPPEKSKEEHFDSNCITPGTPFMAR 170
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
LS L YYIH RLNNDPGW IKVILSDANVPGEGEHKIM ++R QR P +DPNT+H L
Sbjct: 171 LSSCLHYYIHDRLNNDPGWRNIKVILSDANVPGEGEHKIMDFIRRQRAQPDHDPNTQHVL 230
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
G DADLIML LATHE +F+I+RE F P + C +CGQ GH C G + E +
Sbjct: 231 CGADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCDICGQLGHEMRECTGAEPNQKPEEN 289
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
G E + F+ + LREYL+ E +PN PF+ D E VDD++FMCFFVGNDFLP
Sbjct: 290 TYGSEC-----QFIFVRLNVLREYLERELHMPNLPFKYDFERAVDDWVFMCFFVGNDFLP 344
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIREGAI+ L+A+YK+ GG+LTD +L RV+ + +G ED IF+KR
Sbjct: 345 HLPSLEIREGAIDRLVALYKRAVYKTGGFLTDSGDVNLDRVQLIMSELGDAEDEIFKKR- 403
Query: 300 RLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGR 359
Q +REK + +R + + + +P +F +P+P Q+ V
Sbjct: 404 --QQNELAFKQREKDKKKRNEIISSFKP--TWIPAGQF---------APTPLGQT--VKP 448
Query: 360 LDNGKGTSGRPHKVPR--LSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSD 417
++N + + + R ++ A A E+ + NK + K K+ E+ +
Sbjct: 449 IENARYEAYKMRVQGRNYNTNAADNTNANNALESMLRPENSGNKGQ-KRKINEVSSNDDS 507
Query: 418 AFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYE 477
+ D+V+L E G+K+RYYE KF+ +P+ R +V L+Y GLCWV+ YYY+
Sbjct: 508 DDDQ---AHDEVRLWEDGFKDRYYESKFDV-SPDNL-AFRNNVALQYVRGLCWVLRYYYQ 562
Query: 478 GVCSWQWFYPYHYAPFASDLKDLDQFNISFELGH-PFKPFNQLLGVFPSASSHALPEHYR 536
G SW+W++PYHYAPFASD ++ + FE G PF+P QL+GVFP+AS +P+ +
Sbjct: 563 GCASWRWYFPYHYAPFASDFINIGGLSTEFEKGTVPFRPLEQLMGVFPAASRKHVPKPWA 622
Query: 537 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 596
KLMTDP S I DFYP DF++D+NGK+++WQG+A LPF+DE RL + +LTE E
Sbjct: 623 KLMTDPKSQIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALAPYYDSLTEAEKM 682
Query: 597 RNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI---SP 653
RN D L+V + + S + + ++ + VE+ DGM G +
Sbjct: 683 RNVRGDDRLYVGIEN--SGYNFVKGLYKNRIGFDKEVEIS-------IDGMRGTVFLSED 733
Query: 654 CAGDPHPPVFRSPVASMEDIMGNQVLCAIYKLP---DAHKHVTRPPAGVIFPKKIVQLED 710
C D SPV + + N+V C +K P +++ + R G P ++++ +D
Sbjct: 734 CVSDGG--TLPSPVRGLP-VRNNKVYCIKFKDPKYNNSYIFLARKLKGAKEPPRVLKPQD 790
Query: 711 L 711
Sbjct: 791 F 791
>gi|326471133|gb|EGD95142.1| 5'-3' exoribonuclease [Trichophyton tonsurans CBS 112818]
Length = 1066
Score = 506 bits (1304), Expect = e-140, Method: Compositional matrix adjust.
Identities = 290/671 (43%), Positives = 401/671 (59%), Gaps = 73/671 (10%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEF------EREGRK---LPPKSDSQVFDSNVIT 51
MNQQRSRRFR+++DA AE+E+ + EF ++ G+K + + ++ +D+NVIT
Sbjct: 142 MNQQRSRRFRSAQDAK---AEDEK-KVEFAKLLKKQKRGKKDVTVAEEVITKTWDTNVIT 197
Query: 52 PGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGY 111
PGT FM +L++AL+Y++ +L+ DPGWEK+KVI+SDA VPGEGEHKIM ++R QR P Y
Sbjct: 198 PGTPFMDILALALRYWVAYKLSTDPGWEKLKVIISDATVPGEGEHKIMEFIRSQRACPEY 257
Query: 112 DPNTRHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGK 170
DPNTRH +YGLDADLIML L THE HF +LRE V F + C LCGQ GH+ C GK
Sbjct: 258 DPNTRHVIYGLDADLIMLGLGTHEPHFRVLREDVFFQESKARTCKLCGQAGHVEEACTGK 317
Query: 171 AKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMC 230
AK K GEFDEK + P KP+ +LH+ LREYL E ++P PF +LE +DD++FMC
Sbjct: 318 AKEKRGEFDEK--QKGNPLKPFIWLHVSVLREYLAVEMQVPQQPFPFNLERALDDWVFMC 375
Query: 231 FFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSY 290
FFVGNDFLPH+P+LEIRE I+ L+A+++ +GGYLT + L + + +Q +
Sbjct: 376 FFVGNDFLPHLPSLEIRENGIDTLIAIWRDNIPQMGGYLTKDGRVDLAKAQLILQGLAKQ 435
Query: 291 EDRIFQKRARLHQRHAERIK-----------------REKAQARRGDDVEPLAQPDSLVP 333
ED IF++R + +R K R+K + RG EP+ LV
Sbjct: 436 EDAIFRRRRQTEERRNANAKRRQEEDRQRRNNNNEHARKKRRGSRG--AEPVPDIPPLVI 493
Query: 334 VSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSG-ATIGAAIVEAENS 392
+ SR + + V + + ++ K LS G A +GA ++S
Sbjct: 494 PGKGELSRAERELTHAMVVNRGAVYKANMANKSAAAALKAQLLSGGTAEVGADATNTQDS 553
Query: 393 FETDPQENKEEFKAKLKELLRDKSDAFNSDN---------------------PEEDK--- 428
+ +K L + KSDAF + N P+ED+
Sbjct: 554 APSGIPGSK---------LGKRKSDAFENSNTEAEAEEEDEEEEETVEVPAKPKEDEMPP 604
Query: 429 --VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFY 486
V+L E G+ +RYYE+KF +P++ R V Y EGL WV+ YY++G SW W+Y
Sbjct: 605 DTVRLWEDGYADRYYEQKFGV-SPKDI-AFRHKVARAYVEGLSWVLLYYFQGCPSWTWYY 662
Query: 487 PYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPI 546
PYHYAPFA+D D+ + ++ F G PFKPF QL+GV P+AS+HA+PE +R LM+D NS I
Sbjct: 663 PYHYAPFAADFVDIGEMDVQFTKGTPFKPFEQLMGVLPAASNHAIPEVFRDLMSDENSEI 722
Query: 547 SDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 606
DFYP DF VD+NGK+++WQG+A LPFIDE RLL + K H L+EEE RN++ D+L
Sbjct: 723 IDFYPEDFPVDLNGKKFAWQGVALLPFIDEKRLLAAMDKRYHLLSEEEQARNAMGKDVLL 782
Query: 607 VLLSHPLSASI 617
+ HPL S+
Sbjct: 783 LSEKHPLYESL 793
>gi|449673057|ref|XP_002169407.2| PREDICTED: LOW QUALITY PROTEIN: 5'-3' exoribonuclease 2-like [Hydra
magnipapillata]
Length = 999
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 356/985 (36%), Positives = 499/985 (50%), Gaps = 119/985 (12%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+KDA + E ERL + R + + N GTEFM L
Sbjct: 111 MNQQRSRRFRAAKDARERERERERLLDDRFYXNRYV---------NKNFFKXGTEFMDRL 161
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
++ L+YYI RL NDPGW+ IKVILSDAN PGEGEHKIM ++R QR P +DPNT+HCL
Sbjct: 162 AVCLRYYIAHRLTNDPGWKNIKVILSDANTPGEGEHKIMDFIRKQRAQPDHDPNTKHCLN 221
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHEVHF+ILRE F P Q+ C +CGQ GH +CEG K G
Sbjct: 222 GADADLIMLGLATHEVHFTILRE-EFKPNQKRPCEICGQIGHEKTDCEGLPKENLGS--N 278
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
+ +V + F+ + LREYL+ E ++ PF + E +DD++FMCFFVGNDFLPH
Sbjct: 279 CVETPIVQDVEFIFIRLHVLREYLERELKMEGLPF-YNFERALDDWVFMCFFVGNDFLPH 337
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIREGAI+ L+ +YK+ LGGYL D +L+R + +Q VG ED IF+KR
Sbjct: 338 LPSLEIREGAIDRLVNIYKRCLPQLGGYLGDSGIVNLKRAQRILQEVGDVEDEIFRKR-- 395
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRL 360
Q+ E +K K Q + + + DS R +G+ L + SP S
Sbjct: 396 --QQFEENMKARKKQNDERNKRQKMEGCDSPFWSPRMNGTPLGANHSPFMRTPSAFNEVS 453
Query: 361 DNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFN 420
N K S ++ ++ ++ NS + P + ++ D +
Sbjct: 454 PNMKAASDLRQQLTPSTNNSS---------NSIQATPTSTSRKRHSE------DNVEKNE 498
Query: 421 SDNPEEDKVKLGEPGWKERYYEEKFNA---KTPEEREETRKDVVLRYTEGLCWVMHYYYE 477
SD+ D ++L E GWKERYY KF+ K P ++ RK Y GLCWV+ YYY+
Sbjct: 499 SDDEPVDNIRLWEEGWKERYYLHKFSVSKEKDPVYFQKFRKHTANEYVIGLCWVLRYYYQ 558
Query: 478 GVCSWQWFYPYHYAPFASDLKDLDQFNISFELGH-PFKPFNQLLGVFPSASSHALPEHYR 536
G CSW WFYP+HYAPFASD D++ ++ FE G PFKP QL+ VFP+AS LP +R
Sbjct: 559 GCCSWNWFYPFHYAPFASDFGDIEDLDVKFEKGTVPFKPLEQLMSVFPAASGKFLPPTWR 618
Query: 537 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 596
LM+ P+SPI DFYPTDF++D+NGK+++WQG+A LPF+DE RL + + + LTE+E R
Sbjct: 619 SLMSSPDSPIIDFYPTDFKIDLNGKKFAWQGVALLPFVDEKRLHRTLVSVYNDLTEDEIR 678
Query: 597 RNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAG 656
R+ ++LFV ++PL + L E +KE K+ + +LS G+ G +
Sbjct: 679 RSRRDDEVLFVGKANPLFDYLIGLHESG---MLKE----KQNIVTDLSLGVRGTVYYDEN 731
Query: 657 DPHP-PVFRSPVASMEDIMGNQVLCAIYKLP---DAHKHVTR------PPAGVIFPKKIV 706
P + P+ E I Q Y P + ++ R PP ++ P
Sbjct: 732 GVLPGKRYVCPLPDGEHIDCTQTFSVKYNDPVYEEDFIYLARVLDKATPPDRILKPGDFE 791
Query: 707 QLEDLKPAPVLWHEDSGRRPHENGRHNPHGTISGRQLGEAAHRLVANSLQHMKVDRNGYG 766
Q P P + GR G NP+ +G HR++ + L +
Sbjct: 792 QNRQWSPMPGM-----GR-----GSRNPN------HIGSGGHRMIRHELASNSI------ 829
Query: 767 DRMHGSPLPYAAAPYVPPVPSYQEYGVYDQGYNRFSQPRTDSYPAGHSQSSISAAQPPYD 826
SP ++PY SYQ + D G R +S+ +G++ S S P +
Sbjct: 830 -----SPRYRTSSPYAQTPLSYQSHQ--DGG-------RNNSF-SGYNNSPRSYHTSPVN 874
Query: 827 GGYSQHYASNTSHHPN--RRYHPQYDRNS--SGEH--PTHLYNPSGIHQNGGPRYPPRPM 880
S++Y +NT N R Y+ D + G++ P +YN S H
Sbjct: 875 INSSRNYNNNTRSCDNSPRSYNSPRDNQTYNRGDYHSPRLVYNSSRDH------------ 922
Query: 881 GSTSSGANLYPPQGGYSGYQSPAAGSFNQ--WGGANQSMPRGYGQGQHHQRRDGGYQQYH 938
SS + PQ +S SP NQ W S + H RD +Q +
Sbjct: 923 --NSSFGSYGTPQRTFS---SPQIEGCNQQPWSSVRPS----FCLPSPHSDRDDLERQRY 973
Query: 939 DQQRNYSHLQGNHQQRGNQGQHQPR 963
R + Q ++++R +PR
Sbjct: 974 SADRGKNQSQNDNRRRSYSDVQKPR 998
>gi|212645622|ref|NP_496958.2| Protein XRN-2 [Caenorhabditis elegans]
gi|218511968|sp|Q9U299.2|XRN2_CAEEL RecName: Full=5'-3' exoribonuclease 2 homolog
gi|189309813|emb|CAB54449.2| Protein XRN-2 [Caenorhabditis elegans]
Length = 975
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 311/774 (40%), Positives = 431/774 (55%), Gaps = 62/774 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQV-FDSNVITPGTEFMAV 59
MNQQRSRRFRASK+ A+ A E R EG +PPK + FDSN ITPGT FMA
Sbjct: 111 MNQQRSRRFRASKEMAEKEASIEEQRNRLMAEGIAVPPKKKEEAHFDSNCITPGTPFMAR 170
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
L+ AL+YYIH R+ ND W I++ILSDANVPGEGEHKIM YVR QR P +DPNT HCL
Sbjct: 171 LADALRYYIHDRVTNDASWANIEIILSDANVPGEGEHKIMDYVRKQRGNPAHDPNTVHCL 230
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
G DADLIML +ATHE +F+I+RE F P Q C LCGQ GH C G A
Sbjct: 231 CGADADLIMLGIATHEANFNIIRE-EFVPNQPRACDLCGQYGHELKECRG-----AENET 284
Query: 180 EKGDEVVVP---KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGND 236
+ GD+ P +K + FL I LREYL+ E +PN PF+ D+E +DD++F+CFFVGND
Sbjct: 285 DLGDDYCKPEQREKNFIFLRIPVLREYLEKELSMPNLPFKFDVERALDDWVFLCFFVGND 344
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLPH+P+LEIREGAI+ L+ +YK+ + GYLT P L RVE ++ +G ED IF+
Sbjct: 345 FLPHLPSLEIREGAIDRLIKLYKEMVYQMKGYLTKDGIPELDRVEMIMKGLGRVEDEIFK 404
Query: 297 KRARLHQRHAERIKREKAQAR--------RGDDVEPLAQPDSLVPVSRFHGSRLASGPSP 348
+R + +R E + +KA+ + Q + VP HG LA +P
Sbjct: 405 RRQQDEERFQENQRNKKARMQMYGGGGRGGRGRGRGRGQQPAFVPT---HGI-LAPMAAP 460
Query: 349 SPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAI-VEAENSFETDPQENKEEFKAK 407
+ + T+ + ++ A + A + V+ E S P + +
Sbjct: 461 MHHSGESTRQMASEARQTAMKFTNDANETAAANLKALLNVKGEES----PADIASRKRKA 516
Query: 408 LKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEG 467
+ L++ + + D +D ++L E GWK+RYY KF+ + + E R V Y EG
Sbjct: 517 EQPLIKPEEE---EDEGPKDDIRLYESGWKDRYYRAKFDVGSDD--IEFRHRVAWAYVEG 571
Query: 468 LCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFEL-GHPFKPFNQLLGVFPSA 526
LCWV+ YYY+G SW W++PYHYAPFASD + + +F F PF P QL+ VFP+A
Sbjct: 572 LCWVLRYYYQGCASWDWYFPYHYAPFASDFETVGEFQPDFTRPTKPFNPLEQLMSVFPAA 631
Query: 527 SSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKI 586
S LP ++KLM +SPI D YP DF +D+NGK+Y+WQG+A LPF+DE RLL ++ +
Sbjct: 632 SKQHLPVEWQKLMIQDDSPIIDLYPADFRIDLNGKKYAWQGVALLPFVDETRLLATLQSV 691
Query: 587 EHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDG 646
TLT EE +RN+ + +F+ +H + + + K + V L+P L +G
Sbjct: 692 YPTLTAEEKQRNTRGPNRIFIGRNH----KSFEFFQQVAESKSDDLVP----LDPTLLNG 743
Query: 647 MNGYIS--PCAGDPHPPVFRSPVA--SMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFP 702
++G I+ A P P F SPV +D+ N +C +Y+ P+ P IFP
Sbjct: 744 VSGKIAYDSTATAPGLP-FVSPVNHDECQDLPTNCGICVLYEDPEY-------PQDYIFP 795
Query: 703 KKIVQLEDLK-PAPVLWHEDSGRRPHENGRHNPHGTISGR----QLGEAAHRLV 751
++L+ K P L +D R +GR+ P + L ++ HR V
Sbjct: 796 A--LRLDGAKEPEKTLKPDDWNDR--RDGRYQPQVGFNRNAPRGSLDQSGHRQV 845
>gi|313232494|emb|CBY24162.1| unnamed protein product [Oikopleura dioica]
Length = 853
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 306/765 (40%), Positives = 435/765 (56%), Gaps = 55/765 (7%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKS-DSQVFDSNVITPGTEFMAV 59
MNQQRSRRFRA+K++ + + E ER G +LPP + FDSN ITPGTEFM
Sbjct: 111 MNQQRSRRFRAAKESVQLSELMAEKKLEIERAGGRLPPPDPKKEKFDSNCITPGTEFMDR 170
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
L+ AL++YI RLN + GW+++ VILSDA+VPGEGEHKI+ Y+R QRN P +DPNT HC+
Sbjct: 171 LAKALRFYISERLNKEAGWQELNVILSDASVPGEGEHKIIDYIRKQRNTPTHDPNTHHCI 230
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
+G DADLIML LATHE +F+I+RE F G+ C LCGQ GH +C G E
Sbjct: 231 WGADADLIMLGLATHEPNFTIVREE-FVYGKPKPCVLCGQCGHELIDCLG-----LPEGV 284
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
E + V K Y F+ I T+RE++ E +IPN P DLE I+DD+I +CFFVGNDFLP
Sbjct: 285 EDKEPPVFSKGNYIFIRIATVREWIAQELQIPNIPITWDLENIIDDWILLCFFVGNDFLP 344
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+L IREGAI+ L+ +YK+ + Y+T +L+ VE ++++G ED IF+KR
Sbjct: 345 HLPSLSIREGAIDKLVGIYKRTVCEMKSYMTKDGTVNLKAVEFVMRSIGRMEDAIFKKRR 404
Query: 300 RLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGR 359
+ + R +R K Q R + + ++ H + +A P ++ R
Sbjct: 405 QEECQRRVRDERRKHQDR-----------NKRLNRNQVHQTPVAKSGVMEPKMVNQH-QR 452
Query: 360 LDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAF 419
+ ++ + ++ A + AA +E + D ++ AK + + ++D
Sbjct: 453 KAKAHDLNKTARQIRQEAAEARLTAAKLE-----DQDTEQITLSALAKARAMQARQND-- 505
Query: 420 NSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGV 479
NS ED+V+L E GWK+RY+ KF+ + + ++ VV YTEGLCWV YY++G
Sbjct: 506 NSALDAEDEVRLFEDGWKDRYFRTKFDVSADDN--DFKRAVVGAYTEGLCWVFAYYFQGC 563
Query: 480 CSWQWFYPYHYAPFASDLKDLDQFNISFEL-GHPFKPFNQLLGVFPSASSHALPEHYRKL 538
W W+YPYHYAPFASD LD I+++ P KP QL+ VFP+ S LP +RKL
Sbjct: 564 LDWGWYYPYHYAPFASDFVHLDSVEINWQRDAKPRKPLEQLMCVFPAGSGEFLPPSWRKL 623
Query: 539 MTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
M+DP+S I D YPTDF VD+NGK++ W G+A LPF+DEARL + K+ LTE+E RRN
Sbjct: 624 MSDPDSQIIDMYPTDFVVDLNGKKFEWMGVALLPFLDEARLHRTLAKVYGDLTEDEKRRN 683
Query: 599 SIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSD--GMNGYISPCA- 655
+ D LFV + + + + E K KE +E + E D G+ G IS A
Sbjct: 684 GVGEDKLFVGRRNKIYGKLRDVYETDK----KEFHMAEEGADIEAKDIHGIQGIISIDAM 739
Query: 656 GDPHPPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIV-----QLED 710
+P +SP EDI N + Y LP+ P G +FP KI+ +
Sbjct: 740 CNPEDTFLQSPGDFCEDINNNFAISVTYNLPEF-------PPGFVFPAKILPGAKFPESN 792
Query: 711 LKPAPVLWHEDSGRRPHENGRHNPHGTISGRQLGEAAHRLVANSL 755
LKP + S R P + ++N SG ++ +A HR++ +S+
Sbjct: 793 LKPR----GDRSNRAPQDWSKNNHR---SGARVDQAGHRMLDHSM 830
>gi|313246745|emb|CBY35616.1| unnamed protein product [Oikopleura dioica]
Length = 853
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 306/765 (40%), Positives = 435/765 (56%), Gaps = 55/765 (7%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKS-DSQVFDSNVITPGTEFMAV 59
MNQQRSRRFRA+K++ + + E ER G +LPP + FDSN ITPGTEFM
Sbjct: 111 MNQQRSRRFRAAKESVQLSELMAEKKLEIERAGGRLPPPDPKKEKFDSNCITPGTEFMDR 170
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
L+ AL++YI RLN + GW+++ VILSDA+VPGEGEHKI+ Y+R QRN P +DPNT HC+
Sbjct: 171 LAKALRFYISERLNKEAGWQELNVILSDASVPGEGEHKIIDYIRKQRNTPTHDPNTHHCI 230
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
+G DADLIML LATHE +F+I+RE F G+ C LCGQ GH +C G E
Sbjct: 231 WGADADLIMLGLATHEPNFTIVREE-FVYGKPKPCVLCGQCGHELIDCLG-----LPEGV 284
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
E + V K Y F+ I T+RE++ E +IPN P DLE I+DD+I +CFFVGNDFLP
Sbjct: 285 EDKEPPVFLKGNYIFIRIATVREWIAQELQIPNIPITWDLENIIDDWILLCFFVGNDFLP 344
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+L IREGAI+ L+ +YK+ + Y+T +L+ VE ++++G ED IF+KR
Sbjct: 345 HLPSLSIREGAIDKLVGIYKRTVCEMKSYMTKDGTVNLKAVEFVMRSIGRMEDAIFKKRR 404
Query: 300 RLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGR 359
+ + R +R K Q R + + ++ H + +A P ++ R
Sbjct: 405 QEECQRRVRDERRKHQDR-----------NKRLNRNQVHQTPVAKSGVMEPKMVNQH-QR 452
Query: 360 LDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAF 419
+ ++ + ++ A + AA +E + D ++ AK + + ++D
Sbjct: 453 KAKAHDLNKTARQIRQEAAEARLTAAKLE-----DQDTEQITLSALAKARAMQARQND-- 505
Query: 420 NSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGV 479
NS ED+V+L E GWK+RY+ KF+ + + ++ VV YTEGLCWV YY++G
Sbjct: 506 NSALDAEDEVRLFEDGWKDRYFRTKFDVSADDN--DFKRAVVGAYTEGLCWVFAYYFQGC 563
Query: 480 CSWQWFYPYHYAPFASDLKDLDQFNISFEL-GHPFKPFNQLLGVFPSASSHALPEHYRKL 538
W W+YPYHYAPFASD LD I+++ P KP QL+ VFP+ S LP +RKL
Sbjct: 564 LDWGWYYPYHYAPFASDFVHLDSVEINWQRDAKPRKPLEQLMCVFPAGSGEFLPPSWRKL 623
Query: 539 MTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
M+DP+S I D YPTDF VD+NGK++ W G+A LPF+DEARL + K+ LTE+E RRN
Sbjct: 624 MSDPDSQIIDMYPTDFVVDLNGKKFEWMGVALLPFLDEARLHRTLAKVYGDLTEDEKRRN 683
Query: 599 SIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSD--GMNGYISPCA- 655
+ D LFV + + + + E K KE +E + E D G+ G IS A
Sbjct: 684 GVGEDKLFVGRRNKIYGKLRDVYETDK----KEFHMAEEGADIEAKDIHGIQGIISIDAM 739
Query: 656 GDPHPPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIV-----QLED 710
+P +SP EDI N + Y LP+ P G +FP KI+ +
Sbjct: 740 CNPEDTFLQSPGDFCEDINNNFAISVTYNLPEF-------PPGFVFPAKILPGAKFPESN 792
Query: 711 LKPAPVLWHEDSGRRPHENGRHNPHGTISGRQLGEAAHRLVANSL 755
LKP + S R P + ++N SG ++ +A HR++ +S+
Sbjct: 793 LKPR----GDRSNRAPQDWSKNNHR---SGARVDQAGHRMLDHSM 830
>gi|47214629|emb|CAG01470.1| unnamed protein product [Tetraodon nigroviridis]
Length = 836
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 304/761 (39%), Positives = 426/761 (55%), Gaps = 68/761 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ A+ E++R+R+E GTEFM L
Sbjct: 111 MNQQRSRRFRASKEGAELVEEKKRIREE------------------------GTEFMDNL 146
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW I V LSDA+VPGEGEHKIM ++R QR P +DPNT HCL
Sbjct: 147 AKCLRYYIADRLNNDPGWRNITVFLSDASVPGEGEHKIMDFIRRQRAQPNHDPNTHHCLC 206
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LCGQ GH +C+G A+ K GE DE
Sbjct: 207 GADADLIMLGLATHEPNFTIIREE-FKPNKPRPCALCGQLGHEIKDCQGTAREKKGEHDE 265
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + V ++ + F+ + LREYL E + + PF D E VDD++FMCFFVGNDFLPH
Sbjct: 266 FADSMPVAEQEFIFIRLCVLREYLARELTMASLPFPFDFERSVDDWVFMCFFVGNDFLPH 325
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIREGAI+ L+ +YK GGYLT+ L RVE +QAVG ED IF+KR
Sbjct: 326 LPSLEIREGAIDRLVNIYKDVVHKTGGYLTENGYVKLERVEMIMQAVGVAEDNIFKKRKE 385
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRL 360
+ ++ ++ + ++ + + + +F L P Q +
Sbjct: 386 ------DEVRFKRRMREKKKRMKMEQRGPAYLTTGQFTPHALGGRDQPEAVQNARYQA-Y 438
Query: 361 DNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFN 420
+ K + + +K ++ ++ AA+ NS T P E AK K++ +
Sbjct: 439 EMRKQSMEQHNK----NAAQSLKAAMRNGGNS-STWPSSGPESRGAK------RKAEDSD 487
Query: 421 SDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVC 480
S+ ED V+L E GWK+RYY+ KF+ +E + R+ VV Y EGLCWV+ YYY+G
Sbjct: 488 SEPEPEDNVRLWEEGWKQRYYKNKFDVDVMDE--DFRRKVVQSYVEGLCWVLRYYYQGCA 545
Query: 481 SWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLM 539
SW+W++P+HYAPFASD KD+ FE G PFKP QL+GVFP+AS + LPE +R LM
Sbjct: 546 SWKWYFPFHYAPFASDFKDIKGMFSEFEKGTKPFKPLEQLMGVFPAASGNFLPETWRNLM 605
Query: 540 TDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 599
+ P+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL + + LT EE +RNS
Sbjct: 606 SSPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALADVYPDLTPEEEKRNS 665
Query: 600 IMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPH 659
+ +D +F+ +H L Y + + + E E+ +L G+ G ++ DP
Sbjct: 666 LGSDFIFLGKAHLL----YDFIQELYRTEATEGTEIPA----DLCHGIQGTLN-LDDDPI 716
Query: 660 PP--VFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKPAPVL 717
P SP+ ++ DI N + ++ P P G +F ++ + P+ VL
Sbjct: 717 LPDKTVISPIPTLRDITQNNSVGVKFRDPQY-------PDGFVFKATLLPKAKI-PSNVL 768
Query: 718 WHEDSGRRPHENGRHNPHGTISGRQ---LGEAAHRLVANSL 755
ED R + G RQ L +++ R + +SL
Sbjct: 769 KPEDWDRGGNRGSWRPQLGFNPNRQQARLDQSSFRALGHSL 809
>gi|322709893|gb|EFZ01468.1| 5'->3' exoribonculease Dhp1 [Metarhizium anisopliae ARSEF 23]
Length = 930
Score = 503 bits (1296), Expect = e-139, Method: Compositional matrix adjust.
Identities = 289/689 (41%), Positives = 394/689 (57%), Gaps = 59/689 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFERE-GRKLPP----KSDSQVFDSNVITPGTE 55
MNQQRSRRFR+++DA + ++ L + +++ G LPP +VFD+N ITPGT
Sbjct: 112 MNQQRSRRFRSAQDAKEKEENKKELLKLVKQQNGGVLPPDHIESVAKKVFDNNSITPGTP 171
Query: 56 FMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNT 115
FM +L+++L+Y+ +LN DP W K+KV++SDA VPGEGEHKIMS++R QR P YDPNT
Sbjct: 172 FMDILAVSLRYWCQYKLNTDPAWAKMKVLISDATVPGEGEHKIMSFIRSQRASPEYDPNT 231
Query: 116 RHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRK 174
RH +YGLDADLIML LATHE HF +LRE V F G+ C LCGQ GH A NC G+AK K
Sbjct: 232 RHVIYGLDADLIMLGLATHEPHFRVLREDVFFQEGRARTCQLCGQKGHEARNCRGEAKEK 291
Query: 175 AGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVG 234
A + D+K V + KP+ +LH+ LREYL E +P PF DLE +DD++FMC FVG
Sbjct: 292 ADDVDDKPGNVTL--KPFIWLHVSVLREYLAAELAVPGLPFRFDLERAIDDWVFMCCFVG 349
Query: 235 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI 294
NDFLPH+P LEIRE I+ L +++ +GGY+T L R + + + ED I
Sbjct: 350 NDFLPHLPALEIREHGIDTLTTIWRNNLPTMGGYVTKDGHIDLERAQRILDGLAKQEDEI 409
Query: 295 FQKRARLHQRHAERIKREKAQ-------ARRGDDVEPL-------AQPDSLVPVSRFHGS 340
F++R R KR K Q RG E +Q L P+S +
Sbjct: 410 FKRRKEQEDRREANAKRRKLQQNNNSYRGSRGSLTEDRKYGHHDPSQGLPLYPISSY--- 466
Query: 341 RLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAE--NSFETDPQ 398
P + + +S + V S+ + I I EA S T+P+
Sbjct: 467 ---------PKEPPRAITHDMVVNKSSAQAANVANKSAASIIKDQIREANRHGSVTTEPE 517
Query: 399 ENKEEFKAKLKELLRDKSD-----------AFNSDNPEE-----DKVKLGEPGWKERYYE 442
+ + E D A +++P D V+L E G+ +RYY+
Sbjct: 518 ASSSILGKRKAESQSDTETANTNTEVGTVQASKTEHPASAEDHIDTVRLWEDGYADRYYQ 577
Query: 443 EKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQ 502
+KF+ ++P++ R +V Y EGL WV+ YY++G SW+W+YPYHYAPFA+D KDL
Sbjct: 578 QKFH-RSPDDI-SFRHEVARAYVEGLAWVLLYYFQGCPSWEWYYPYHYAPFAADFKDLAN 635
Query: 503 FNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKR 562
+I FE G KPF QL+ V P+AS HALPE + LMTD +S I DFYP DFEVD+NGK+
Sbjct: 636 MDIIFEKGRVSKPFEQLMSVLPAASRHALPEVFHPLMTDEDSEIIDFYPEDFEVDLNGKK 695
Query: 563 YSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDE 622
+WQG+A LPFID RLL V+ L+ EA RN+ D VLL + S+Y D+
Sbjct: 696 MAWQGVALLPFIDMPRLLAAVQTKYPLLSSAEAARNATGRD---VLLLSDNNGSMY--DD 750
Query: 623 HCKQLKIKERVEVKERLNPELSDGMNGYI 651
+ K + K +LNP+ SDG++G +
Sbjct: 751 ILTKFYSKRQECSKFKLNPKNSDGLSGKV 779
>gi|312384683|gb|EFR29353.1| hypothetical protein AND_01770 [Anopheles darlingi]
Length = 867
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 308/760 (40%), Positives = 407/760 (53%), Gaps = 60/760 (7%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAV 59
MNQQRSRRFRASK+AA+ A E R+R+E +G LPP K FDSN ITPGT FM
Sbjct: 74 MNQQRSRRFRASKEAAEKATEVARIREELAAKGAILPPEKEKGSHFDSNCITPGTPFMDR 133
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
LS LQYYIH R+NN PGW+ +KVILSDANVPGEGEHKIM Y+R QR P YDPNT H L
Sbjct: 134 LSKCLQYYIHDRMNNYPGWKDLKVILSDANVPGEGEHKIMDYIRKQRVQPDYDPNTHHVL 193
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
G DADLIML LATHE HF+I+RE F P + C +C Q GH +C G +
Sbjct: 194 CGADADLIMLGLATHETHFTIIREE-FLPNKDRPCDICQQIGHEMKDCSGLQSER----- 247
Query: 180 EKGDEVVVPKKP-----YQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVG 234
D + P P + F+ + L+EYL E +PN PF D E ++DD++FMCFFVG
Sbjct: 248 ---DMIKTPPGPGKETQFIFVRLNVLKEYLQKELDMPNLPFAYDFERVIDDWVFMCFFVG 304
Query: 235 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI 294
NDFLPH+P+LEIRE AI+ L+ +YKK GYLTD L RVE + +G ED I
Sbjct: 305 NDFLPHLPSLEIRENAIDRLITLYKKCVYKTRGYLTDSGSVVLDRVEMIMTDLGFAEDEI 364
Query: 295 FQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQS 354
F++R R ER KR + Q R +P+ + S+ A P Q +
Sbjct: 365 FRQRKVSEDRFKERNKRMRLQKDRQQ------RPN----FQHINNSQFAPTPLGRGVQPA 414
Query: 355 ECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRD 414
V N + + + + +A E + P++ K + + L ++ +
Sbjct: 415 AIV----NARQEAAHFRMLGSGGGSGSASSATGGNEATEGGKPRDMKRKAEEPLSVVVAE 470
Query: 415 KSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 474
+ + D +V+L E G+K+RYYE KF+ + + R+ V Y GLCWV+ Y
Sbjct: 471 EEEKETPD-----EVRLWEDGFKDRYYESKFDVSP--QNIKFRQTVAWEYVRGLCWVLRY 523
Query: 475 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEH 534
YY+G SW+W++PYHYAPFASD K L+ N F+ G PFKP QL+GVFP+AS +P
Sbjct: 524 YYQGCASWEWYFPYHYAPFASDFKHLENVNTHFDRGTPFKPLQQLMGVFPAASRSHVPPA 583
Query: 535 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 594
+ +LM DP SPI DFYP DF +D+NGK+++WQG+A LPF+DE RL LT+EE
Sbjct: 584 FAELMVDPRSPIIDFYPIDFHIDLNGKKFAWQGVALLPFVDEKRLFRATDPKVPLLTQEE 643
Query: 595 ARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPC 654
RN LFVL P S TL + EV + D + G I P
Sbjct: 644 RLRNENGDAKLFVL---PGSTGYRTLAGLYGGNDVDYEREVAVTV-----DYVQGLIVPT 695
Query: 655 AGD-PHPPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKP 713
+ P SP+ + + N+VL + P IFP + +L++
Sbjct: 696 KENVPQDGTLPSPIPGLTAVTDNRVLTVRFLDPKFADD-------FIFPAR--KLDNATD 746
Query: 714 APVLWHEDSGRRPHENGRHNPHGTISGRQLGEAAHRLVAN 753
P + G R + QLG A HR+V N
Sbjct: 747 QPKVLGAQDGPVIGFGPR------VDRAQLGAAGHRMVNN 780
>gi|322692778|gb|EFY84668.1| 5'-3' exoribonuclease 2 [Metarhizium acridum CQMa 102]
Length = 929
Score = 500 bits (1288), Expect = e-138, Method: Compositional matrix adjust.
Identities = 301/755 (39%), Positives = 422/755 (55%), Gaps = 66/755 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFERE-GRKLPP----KSDSQVFDSNVITPGTE 55
MNQQRSRRFR+++DA + +E L + +++ G LPP ++FD+N ITPGT
Sbjct: 112 MNQQRSRRFRSAQDAKEKEENKEELLKLVKQQNGGVLPPDHIESVAKKIFDNNSITPGTP 171
Query: 56 FMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNT 115
FM +L+++L+Y+ +LN DP W K+KV++SDA VPGEGEHKIMS++R QR P YDPNT
Sbjct: 172 FMDILAVSLRYWCQYKLNTDPAWAKMKVLISDATVPGEGEHKIMSFIRSQRASPEYDPNT 231
Query: 116 RHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRK 174
RH +YGLDADLIML LATHE HF +LRE V F G+ C LCGQ GH A NC G+AK K
Sbjct: 232 RHVIYGLDADLIMLGLATHEPHFRVLREDVFFQEGKARTCQLCGQKGHEARNCRGEAKEK 291
Query: 175 AGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVG 234
AG+ D+K + KP+ +LH+ LREYL E +P PF DLE +DD++FMC FVG
Sbjct: 292 AGDIDDKPGNATL--KPFIWLHVSVLREYLAAELAVPALPFRFDLERAIDDWVFMCCFVG 349
Query: 235 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI 294
NDFLPH+P LEIRE I+ L +++ +GGY+T L R + + + ED I
Sbjct: 350 NDFLPHLPALEIREHGIDTLTTIWRNNLPTMGGYVTKDGHIDLERAQRILDGLAKQEDAI 409
Query: 295 FQKRARLHQRHAERIKREKAQ-------ARRGDDVEPL-------AQPDSLVPVSRFHGS 340
F++R R KR K Q RG+ E +Q L P+S +
Sbjct: 410 FKRRKEQEDRREANAKRRKLQHDNNSYRGSRGNLAEDRKYGHHDPSQGLPLYPISSY--- 466
Query: 341 RLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAI----------VEAE 390
P + + +S + V S+ + I I E E
Sbjct: 467 ---------PKEPPRAITHDMVVNKSSAQAANVANKSAASIIKDQIRAANRHDPVGAEPE 517
Query: 391 NSF------ETDPQENKE--EFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYE 442
S + +PQ + E AK+ + K + D V+L E G+ +RYY+
Sbjct: 518 TSSSILGKRKAEPQSDTETANTNAKVGTVQASKPEYPAPAEDPIDTVRLWEDGYADRYYQ 577
Query: 443 EKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQ 502
+KF+ ++P++ R V Y EGL WV+ YY++G SW+W+YPYHYAPFA+D KDL
Sbjct: 578 QKFH-RSPDDI-SFRHKVARAYVEGLAWVLLYYFQGCPSWEWYYPYHYAPFAADFKDLAN 635
Query: 503 FNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKR 562
+I+FE G KPF QL+ V P+AS HALPE + LMTD +S I DFYP DFEVD+NGK+
Sbjct: 636 MDIAFEKGRVSKPFEQLMSVLPAASRHALPEVFHPLMTDEDSEIIDFYPEDFEVDLNGKK 695
Query: 563 YSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDE 622
+WQG+A LPFID RLL V+ L+ EA RN+ D VLL + S+Y D+
Sbjct: 696 MAWQGVALLPFIDMPRLLAAVQNKYPLLSSAEAARNARGRD---VLLLSDNNGSMY--DD 750
Query: 623 HCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPP--VFRSPVA--SMEDIMGNQV 678
+ K + K +LNP+ SDG++G + D + P + P+A +M ++ ++
Sbjct: 751 ILTKFYSKRQECSKFKLNPKNSDGLSGKVE--KRDDYVPHGALQYPLARGAMPNLDYDKS 808
Query: 679 LCAIYKLPDAHK-HVTRPPAGVIFPKKIVQLEDLK 712
+ Y +P H+ H + G P ++ D++
Sbjct: 809 VSVYYDMPQTHQTHKSMLLRGANLPPPVLTPSDVE 843
>gi|198471914|ref|XP_001355769.2| GA10268 [Drosophila pseudoobscura pseudoobscura]
gi|198139522|gb|EAL32828.2| GA10268 [Drosophila pseudoobscura pseudoobscura]
Length = 916
Score = 500 bits (1287), Expect = e-138, Method: Compositional matrix adjust.
Identities = 302/776 (38%), Positives = 413/776 (53%), Gaps = 100/776 (12%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAV 59
MNQQRSRRFRA+K+ + E R+R+E G KLPP K + FDSN ITPGT FM
Sbjct: 112 MNQQRSRRFRAAKETTEKRMEIARIREELLTRGCKLPPEKEKGEHFDSNCITPGTPFMDR 171
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
LS L YY+H R NN+P W+ IKVILSDANVPGEGEHKIM Y+R QR P +DPNT+H L
Sbjct: 172 LSKCLHYYVHDRQNNNPAWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHVL 231
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
G DADLIML LATHE +F+I+RE F P + C +C Q GH C G + + +
Sbjct: 232 CGADADLIMLGLATHEPNFTIIRE-EFLPNKPRPCDICNQFGHEMDKCVGLSAVGSSGAN 290
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
K D + + + F+ + LREYL +PN PFE D E +DD++FMCFFVGNDFLP
Sbjct: 291 FKPDVAIGAEVKFIFVRLSVLREYLKQTLEMPNLPFEYDFERTLDDWVFMCFFVGNDFLP 350
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIREGA++ L+ +YKK GYLTD +L RV+ + +G+ ED+IF+ R
Sbjct: 351 HLPSLEIREGAVDRLVELYKKCVYKTKGYLTDSGDVNLDRVQLIMTDLGNAEDQIFKSRQ 410
Query: 300 RLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGR 359
R Q+ R K+ + Q D + GP+
Sbjct: 411 RREQQFKAREKQRQRQDHSALD-------------------QSVFGPTAV---------- 441
Query: 360 LDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAF 419
G G +G+P + A AA+ + D ++ +E
Sbjct: 442 ---GGGRNGQPSSIANYKQEA---AALRTGQKRPNEDTKDEEE----------------- 478
Query: 420 NSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGV 479
+ D+V+L E G+K RYYE KF+ E R V L+Y GLCWV+ YYY+G
Sbjct: 479 -----DNDEVRLWEDGFKSRYYESKFDVAP--ENHSFRYAVALQYVRGLCWVLKYYYQGC 531
Query: 480 CSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKL 538
SW W++PYHYAPFASD ++ + +FE G PF P QL+GVFP+ASS +PE + +L
Sbjct: 532 ASWNWYFPYHYAPFASDFVNIQGLSTAFEKGTKPFNPLEQLMGVFPAASSSHVPEPWAEL 591
Query: 539 MTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
M+ P+SPI DFYP DF++D+NGK+++WQG+A LPF+DE RL + LT E +RN
Sbjct: 592 MSSPDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALVPYYTQLTGAEVKRN 651
Query: 599 SIMADMLFVLLSHPLSASIYTLDEHCKQL-KIKERVEVKERLNPELSDGMNGYISPCAGD 657
+ L++ S P H K++ KI E + +++ N +GM G I D
Sbjct: 652 KQGHNFLYISNSSP----------HYKKVKKITESTDTEDQCNAISFNGMRGTILRSDID 701
Query: 658 PHPP-VFRSPVASMEDIMGNQVLCAIYKLP----DAHKHVTRPPAGVIFPKKIVQLEDLK 712
SP+A + DI GN ++ + P D R P V P +++ E K
Sbjct: 702 TAIDGCLPSPIAGLPDITGNTIVTTFFIDPEYDDDYIFEAKRLPDAVD-PPQVLPSEGRK 760
Query: 713 PAPVLWHEDSGRRPHENGRHNPHGTISGRQLGEAAHRLVANSLQHMKVDRNGYGDR 768
PV+ G H+ + + HR++ + RNG GDR
Sbjct: 761 TGPVI-----GFNSHQTRAY----------VAPGGHRMLNAGI------RNGQGDR 795
>gi|406861589|gb|EKD14643.1| 5'->3' exoribonculease Dhp1 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 988
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 298/739 (40%), Positives = 412/739 (55%), Gaps = 52/739 (7%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR++++A + A++ L + + +G + + +DSN ITPGT FM +L
Sbjct: 111 MNQQRSRRFRSAQEAQEKEADKAELLKMLKSQGGHIEEPEIKKAWDSNEITPGTPFMDIL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ +L+Y+I +LN DP W K+KVI+SD+ VPGEGEHKIM ++R QR+ P +DPNTRH +Y
Sbjct: 171 AASLRYWIAYKLNTDPAWAKMKVIISDSTVPGEGEHKIMEFIRSQRSSPHHDPNTRHVIY 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADLIML L THE HF +LRE VF + + C LCGQ GH A C GKAK K GEFD
Sbjct: 231 GLDADLIMLGLGTHEPHFRVLREDVFAQERGPRLCRLCGQAGHEARECTGKAKVKDGEFD 290
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
EK + KP+ +LH+ LREYL E +P+ P+ DLE +DD++FMCFFVGNDFLP
Sbjct: 291 EKASAPAL--KPFIWLHVSVLREYLAAELYVPDQPYRFDLERAIDDWVFMCFFVGNDFLP 348
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIRE I+ L+A+++ +GGYLT L R + + + ED IF++R
Sbjct: 349 HLPSLEIRENGIDTLIAIWRDNIPHMGGYLTKDGHVDLERAQFILDGLAKQEDAIFRRRK 408
Query: 300 RLHQRH---AERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGP-----SPSPY 351
+ R A+R K E+ + RG DS P + H A+ +P
Sbjct: 409 QTEDRREAGAKRRKLEQDRGGRGGRGGRGGFKDS--PSNGRHKPHNAAPEGLPLFAPGAS 466
Query: 352 QQSECVGRLDNGKGTSGRPHK--VPRLSSGATIGAAI---------VEAENSFETDPQEN 400
E + G +K + S+ A + + I +A N P
Sbjct: 467 ISREATAMTHDMAVNRGAIYKANLANKSAAAALKSQINGKSSIEDVTDAANKQNEPPVSA 526
Query: 401 KEEFKAKLKELLRDKSDAFNSDNPE------------EDKVKLGEPGWKERYYEEKFNAK 448
+ KA++ E D S D P+ D V+L + G+ +RYYE+KF A
Sbjct: 527 LGKRKAEILEEEGDSSTTPARDTPQPSTPKKPDDEPPPDTVRLWDEGYADRYYEQKFGAD 586
Query: 449 TPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFE 508
+ R V Y EGL WV+ YY++G SW+W+YPYHYAPFA+D +L ISFE
Sbjct: 587 PSDI--AFRHKVAKAYVEGLAWVLLYYFQGCPSWEWYYPYHYAPFAADFANLSDIKISFE 644
Query: 509 LGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGI 568
G F+PF QL+GV P+AS A+PE + LMTDP S I DFYP DF VD+NGK+++WQG+
Sbjct: 645 KGRIFRPFEQLMGVLPAASRQAIPETFHDLMTDPESEIIDFYPEDFVVDLNGKKFAWQGV 704
Query: 569 AKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSH-PLSASIYTLDEHCKQL 627
A LPFID RLL + K L E A RN + D+L V +H L A I T
Sbjct: 705 ALLPFIDSDRLLSAMAKKYPMLPPEVAARNGVGKDVLLVAEAHESLYADIAT------NF 758
Query: 628 KIKERVEVKERLNPELSDGMNGYISPCAGDPHPP--VFRSPVAS--MEDIMGNQVLCAIY 683
K++ +LNP S+G+ G + D + P P+AS M + ++ + Y
Sbjct: 759 YSKKQGPPHFKLNPSTSEGLTGKVE--KNDSYLPHGSLTFPLASGEMPSLDEDRSISVHY 816
Query: 684 KLPDA-HKHVTRPPAGVIF 701
++P + H H + GV F
Sbjct: 817 EMPKSKHIHKSMLLRGVKF 835
>gi|402074937|gb|EJT70408.1| 5'-3' exoribonuclease 2 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1040
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 296/754 (39%), Positives = 418/754 (55%), Gaps = 66/754 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEE-ERLRQEFEREGRKLPPKSDSQV----FDSNVITPGTE 55
MNQQRSRRFR++++A + A ++ E L+ ++ G + P++ V FD+N ITPGT
Sbjct: 112 MNQQRSRRFRSAQEAKEKAEDKMELLKLLKQQNGGDVAPETLESVTKKAFDTNSITPGTP 171
Query: 56 FMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNT 115
FM +L+ +L+Y+ +LN DP W +K+I+SDA VPGEGEHKIM +VR QR+ P +DPNT
Sbjct: 172 FMLILAASLRYWCAYKLNTDPAWANLKIIISDATVPGEGEHKIMDFVRSQRSSPDHDPNT 231
Query: 116 RHCLYGLDADLIMLALATHEVHFSILREVVFTP-GQQDKCFLCGQPGHLAANCEGKAKRK 174
RH +YGLDADLIML LATHE HF +LRE VF G+ C LCGQ GH A NC G+AK+K
Sbjct: 232 RHVIYGLDADLIMLGLATHEPHFRVLREDVFAQQGKARMCKLCGQKGHDAQNCRGEAKKK 291
Query: 175 AGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVG 234
GEFDEK E P KP+ +LH+ LREYL E + N PF DLE VDD+IF+C FVG
Sbjct: 292 EGEFDEK--EKAEPLKPFIWLHVSVLREYLAVELEVSNLPFRFDLERAVDDWIFLCCFVG 349
Query: 235 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI 294
NDFLPH+P LEIRE IN L ++K+ +GGY+T L R++ + + ED I
Sbjct: 350 NDFLPHLPALEIRENGINTLTNIWKRNLATMGGYVTKDGHIDLERIQVIMNGLAQQEDSI 409
Query: 295 FQKRARLHQRHAERIKREKAQ------ARRGDDVEP---LAQPDSLV--------PVSRF 337
F+KR R KR K Q R+G E +A+P ++ ++
Sbjct: 410 FRKRKESEDRKEANAKRRKLQDDREKYGRKGGQNESFGGIAEPGKIITHDMVVNRAATQA 469
Query: 338 HGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDP 397
+ +A+ + S + G+ T P + P + G ++E+S ++ P
Sbjct: 470 QDANVANKSAASILKSQIKALSAPAGEAT---PPETPVKNGG--------DSEDSKDSKP 518
Query: 398 QENKEEFKA-----KLKELLRDKSDAFNSDNPEE------------DKVKLGEPGWKERY 440
E A + ELL D + ++P D V++ E G+ +RY
Sbjct: 519 DTPASETPASALGKRKAELLEDGDSSAGPNSPAPGTPYSGAAEGPVDTVRMWESGYSDRY 578
Query: 441 YEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDL 500
YE+KF+A + R V Y EGL WV+ YY++G SW+W+YPYHYAPFA+D + L
Sbjct: 579 YEQKFHADPKDVG--FRHKVAHAYVEGLAWVLLYYFQGCPSWEWYYPYHYAPFAADFQGL 636
Query: 501 DQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNG 560
ISFE G +P+ QL+ V P+AS LP + LMT+ +S I DFYP DFE+D+NG
Sbjct: 637 ADLKISFEKGRTSRPYEQLMSVLPAASRDNLPPVFHDLMTNEDSEIIDFYPEDFELDLNG 696
Query: 561 KRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTL 620
K+++WQG+ LPFI+ RLL V+ LT EEA RN + ++L + +H +Y
Sbjct: 697 KKFAWQGVVLLPFIEMDRLLAAVEAKYPLLTPEEAARNGVGKEVLILSDAH---EGLY-- 751
Query: 621 DEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPP--VFRSPV--ASMEDIMGN 676
++ K + + LN SD + G +S D + P P+ SM D+ +
Sbjct: 752 EDIITHFYSKRQSGSEFTLNQRNSDLLAGKVSKL--DDYLPHGALAYPLERKSMPDVEYD 809
Query: 677 QVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLED 710
+ L Y++P AH H + GV P + D
Sbjct: 810 RSLSVHYEMPKAHPHKSMLMRGVKLPTPALTRSD 843
>gi|194760286|ref|XP_001962372.1| GF15434 [Drosophila ananassae]
gi|190616069|gb|EDV31593.1| GF15434 [Drosophila ananassae]
Length = 911
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 303/749 (40%), Positives = 400/749 (53%), Gaps = 81/749 (10%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAV 59
MNQQRSRRFRA+K+ + E RLR+E G KLPP K + FDSN ITPGT FM
Sbjct: 112 MNQQRSRRFRAAKETTEKRLEIARLREELMSRGCKLPPEKEKGEHFDSNCITPGTPFMDR 171
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
LS L YY+H RLNN+P W+ +KVILSDANVPGEGEHKIM Y+R QR P +DPNT+H L
Sbjct: 172 LSKCLHYYVHDRLNNNPAWKGVKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHVL 231
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
G DADLIML LATHE +F+I+RE F P + C +C Q GH C G F
Sbjct: 232 CGADADLIMLGLATHEPNFTIIREE-FLPNKPRPCDICNQFGHEMEKCNGLGATTGANF- 289
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
K D + + + F+ + LREYL +PN PFE E +DD++FMCFFVGNDFLP
Sbjct: 290 -KPDVPIGAEVKFIFVRLSVLREYLKQTLVMPNLPFEYSFERALDDWVFMCFFVGNDFLP 348
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIREGA++ L+ +YKK GYLTD +L RV+ + +G+ ED+IF+ R
Sbjct: 349 HLPSLEIREGAVDRLVELYKKCVYKTRGYLTDSGDVNLDRVQLIMTDLGNAEDQIFKNRQ 408
Query: 300 RLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGR 359
R Q+ R K + Q R D L Q S F + + +G P G
Sbjct: 409 RREQQFKARDKARRRQ-ERNQDHRSLDQ-------SVFGANAVGAGNQP---------GN 451
Query: 360 LDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAF 419
+ N K + R SGA G E E + D
Sbjct: 452 IGNYKEAAAALRLGKR--SGAQAGLEDDEEEEEEDND----------------------- 486
Query: 420 NSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGV 479
+V+L E G+K+RYYE KF+ + R V L+Y GLCWV+ YYY+G
Sbjct: 487 --------EVRLWEDGFKDRYYESKFDVAPGNL--QFRYAVALQYVRGLCWVLKYYYQGC 536
Query: 480 CSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKL 538
SW W++PYHYAPFASD ++ + FE G PF P QL+GVFP+ASS +PE + L
Sbjct: 537 ASWNWYFPYHYAPFASDFVNIQGLSTIFEKGTKPFNPLEQLMGVFPAASSSHVPEPWADL 596
Query: 539 MTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
M++P+SPI DFYP DF++D+NGK+++WQG+A LPF+DE RL + LT EE +RN
Sbjct: 597 MSNPDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALVPYYDQLTSEEVKRN 656
Query: 599 SIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDP 658
+ L++ S P H K++K + N GM G ++ +
Sbjct: 657 KRGDNYLYITNSSP----------HFKKVKRITEKSDDDECNAISFSGMRGTLAKSELNT 706
Query: 659 HPP-VFRSPVASMEDIMGNQVLCAIYKLP----DAHKHVTRPPAGVIFPKKIVQLEDLKP 713
RSP++ + DI NQ++ ++K P D R P V PK + E K
Sbjct: 707 AISGCLRSPISGLPDITDNQIITTLFKDPEYDEDFIFEAKRLPEAVDPPKVLPPDEGKKH 766
Query: 714 APVL---------WHEDSGRRPHENGRHN 733
PV+ + DSG R G N
Sbjct: 767 GPVIGFNSHLIRAYIPDSGHRMLNAGMRN 795
>gi|195438180|ref|XP_002067015.1| GK24252 [Drosophila willistoni]
gi|194163100|gb|EDW78001.1| GK24252 [Drosophila willistoni]
Length = 924
Score = 494 bits (1272), Expect = e-136, Method: Compositional matrix adjust.
Identities = 306/771 (39%), Positives = 418/771 (54%), Gaps = 90/771 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAV 59
MNQQRSRRFRA+K+ + AE ER+R+E +G KLPP K + FDSN ITPGT FM
Sbjct: 112 MNQQRSRRFRAAKETIEKRAEIERIREELMTKGCKLPPEKEKGEHFDSNCITPGTPFMDR 171
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
LS L YY+H RLNN+P W+ +KVILSDANVPGEGEHKIM Y+R QR P +DPNT+H L
Sbjct: 172 LSKCLHYYVHDRLNNNPAWKGVKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHVL 231
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEG-KAKRKAGEF 178
G DADLIML LATHE +F+I+RE F P + C +C Q GH C G A
Sbjct: 232 CGADADLIMLGLATHEPNFTIIRE-EFLPNKPRPCDVCNQFGHEMDKCMGLNAIGSTSAA 290
Query: 179 DEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFL 238
+ K D + + + F+ + LREYL +PN PF D E +DD++FMCFFVGNDFL
Sbjct: 291 NFKPDVPIGAEVKFIFVRLSVLREYLKKTLEMPNLPFAYDFERALDDWVFMCFFVGNDFL 350
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 298
PH+P+LEIREGA++ L+ +YKK GYLTD +L RV+ + +G+ ED+IF+ R
Sbjct: 351 PHLPSLEIREGAVDRLVELYKKCVYKTQGYLTDSGDVNLDRVQLIMTDLGNAEDQIFKDR 410
Query: 299 ARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVG 358
R ++ +R K++K R +D++ L Q S F + +G P
Sbjct: 411 QRREKQFRDREKKKKQWER--NDMKSLEQ-------SVFGPQAVGAGKGDGP-------T 454
Query: 359 RLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDA 418
+ N K + ++ + SGA G A
Sbjct: 455 NIQNYKAEAA-ALRLGQKRSGADAGL--------------------------------QA 481
Query: 419 FNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEG 478
D D+V+L E G+K RYYE KF+ + + R V L+Y GLCWV+ YYY+G
Sbjct: 482 EEEDEDCNDEVRLWEDGFKNRYYESKFDVGP--DNLQFRYAVALQYVRGLCWVLKYYYQG 539
Query: 479 VCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRK 537
SW W++PYHYAPFASD ++ + FE G PF P QL+GVFP+ASS +P+ + +
Sbjct: 540 CSSWNWYFPYHYAPFASDFVNIQGLSTLFEKGTKPFNPLEQLMGVFPAASSSHVPQPWVE 599
Query: 538 LMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARR 597
LM+ P SPI DFYP DF++D+NGK+++WQG+A LPF+DE RL + LT EE +R
Sbjct: 600 LMSSPTSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALVPFYEQLTSEEVKR 659
Query: 598 NSIMADMLFVLLSHP---LSASIYTLDEHCKQLKIKERVEVKERLNPELS-DGMNGYISP 653
N + L++ P ++ IY +Q K E + E +S DGM G I+
Sbjct: 660 NKRGNNYLYISKESPHFKVANKIY------RQKKDDEVAQFDEEEGYPISLDGMRGTINR 713
Query: 654 C-AGDPHPPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLK 712
+ +SP+ + DI NQ+L + P + IFP K + + +
Sbjct: 714 TELSTAINAILQSPIGDLPDITDNQILTTTFNDPQYDED-------YIFPAKRLP-KAVD 765
Query: 713 PAPVLWHEDSGRRPHENGRHNPHGTISGRQ-------LGEAAHRLVANSLQ 756
P VL ED HN G + G + + HRL+ NS+Q
Sbjct: 766 PPQVLSPED---------HHNKTGPVIGFNSHLQRAYVPQGGHRLITNSMQ 807
>gi|429849601|gb|ELA24966.1| GTPase-activator protein for Ras-like GTPase, partial
[Colletotrichum gloeosporioides Nara gc5]
Length = 3409
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 283/680 (41%), Positives = 390/680 (57%), Gaps = 44/680 (6%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSD-----SQVFDSNVITPGTE 55
MNQQRSRRFR+++DA ++E + + +++ + P+ + FDSN ITPGT
Sbjct: 112 MNQQRSRRFRSAQDAQQKEEDKEEVMKLLKQQNGGVIPEETLESMTKKAFDSNSITPGTP 171
Query: 56 FMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNT 115
FM +L+ +L+Y+ +L+ DP W ++K+I+SDA VPGEGEHKIMS+VR QR P YDPNT
Sbjct: 172 FMDILAASLRYWCAYKLSTDPAWARLKIIISDATVPGEGEHKIMSFVRSQRISPDYDPNT 231
Query: 116 RHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKRK 174
RH +YGLDADLIML LATHE HF +LRE VF + + C +CGQ GH A NC G+AK K
Sbjct: 232 RHVIYGLDADLIMLGLATHEPHFRVLREDVFFQDSKPRVCRICGQKGHEARNCRGEAKEK 291
Query: 175 AGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVG 234
GEFDE+ E KP+ +LH+ LREYL E +P PF DLE +DD++FMC FVG
Sbjct: 292 VGEFDEQ--EKAPALKPFIWLHVSILREYLAVELNVPGLPFRFDLERALDDWVFMCCFVG 349
Query: 235 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI 294
NDFLPH+P LEIRE I+ L A++K +GGY+T L R + + + ED I
Sbjct: 350 NDFLPHLPALEIRENGIDTLTAIWKDNLPHMGGYVTKDGHVDLARAQLILNGLAKQEDGI 409
Query: 295 FQKRARLHQRHAERIKREKAQARRGD--DVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQ 352
F++R R KR K Q R + P ++ + F A GP+ +
Sbjct: 410 FKRRKEQEDRREANAKRRKLQEERNQPRNARPKQVDNAAAGLPLFPA---AGGPNGITHD 466
Query: 353 QSECVGRLDNGKGTS--------------GRPHKVPRLSSGATIGAAIVEAENSFETDPQ 398
VGR N S G K + G AA V+A ++ TD +
Sbjct: 467 M--VVGRSSNMNANSANKSAASAIRDQIKGMMSKAEPIPEGDASQAAKVDAPSA-STDAK 523
Query: 399 ENKEEFKAKLK-ELLRDKSDAFNSDNPEE------DKVKLGEPGWKERYYEEKFNAKTPE 451
+ KA + + L + A P D V++ E G+ +RYYE+KF+ +
Sbjct: 524 SILGKRKADGEPDQLSTPTPAAGISTPSAAEEAAMDHVRMWEEGYADRYYEQKFHVDRKD 583
Query: 452 EREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGH 511
E R V Y EGL WV+ YY++G SW+W+YPYHYAPFA+D +LD+ I+FE G
Sbjct: 584 I--EFRHQVARAYVEGLSWVLLYYFQGCPSWEWYYPYHYAPFAADFVELDKMEIAFEKGR 641
Query: 512 PFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKL 571
+PF QL+ V P+AS HALPE + LM + +S + DFYPTDFE+D+NGK+ +WQG+A L
Sbjct: 642 ISRPFEQLMSVLPAASRHALPEVFHDLMLNEDSEVIDFYPTDFEIDLNGKKMAWQGVALL 701
Query: 572 PFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKE 631
PFI+ RLL V+K L+ + RN + D+L + +H +Y DE K+
Sbjct: 702 PFIEMPRLLAAVEKKYPLLSAADRARNGVGRDVLLLSDAH---HDLY--DEITTNFYSKK 756
Query: 632 RVEVKERLNPELSDGMNGYI 651
+ E +LNP SDG++G I
Sbjct: 757 QGEPTLKLNPRTSDGLSGKI 776
>gi|242011511|ref|XP_002426492.1| 5'-3' exoribonuclease, putative [Pediculus humanus corporis]
gi|212510618|gb|EEB13754.1| 5'-3' exoribonuclease, putative [Pediculus humanus corporis]
Length = 869
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 311/821 (37%), Positives = 452/821 (55%), Gaps = 80/821 (9%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAV 59
MNQQRSRRFRASK++A+ E RLR+E +G LPP K FDSN ITPGT FM
Sbjct: 111 MNQQRSRRFRASKESAEKIEEITRLREELLNKGAYLPPEKPQESHFDSNCITPGTPFMNR 170
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
LS L YYIH +LNND W+ IKVILSDA+VPGEGEHKIM ++R QR P +DPNT+H L
Sbjct: 171 LSACLDYYIHDKLNNDAAWKGIKVILSDASVPGEGEHKIMDFIRKQRAQPDHDPNTQHVL 230
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
G DADLIML LATHE +F+I+RE F P + C +C Q GH +C G K GE
Sbjct: 231 CGADADLIMLGLATHEPNFTIIRE-EFRPNKPKPCEICSQLGHDMKDCIGCPKPLDGEMI 289
Query: 180 EK---GDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGND 236
E G+EV P+ F+ + LREYL+ E +P PF+ D E ++DD++FMCFFVGND
Sbjct: 290 ETTTFGEEV-----PFIFVRLSVLREYLEKELTMPGLPFKYDFERVIDDWVFMCFFVGND 344
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLPH+P+LEIREGAI+ L+ +YK GG++TD +L RV+ + +G ED IF+
Sbjct: 345 FLPHLPSLEIREGAIDRLVNLYKNCVYKTGGFVTDSGDVNLNRVQLILNELGKVEDEIFK 404
Query: 297 KRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSEC 356
H++ E + + + A++ ++ + + +PV +F +P+P Q+
Sbjct: 405 -----HRQQTELMYKRRNAAKKRIALQYKNEIPASLPVGQF---------APTPLGQNFQ 450
Query: 357 VGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKS 416
+ + + T+ R ++ S + I A + D + K LKE ++
Sbjct: 451 PPAIVSPRQTA-RDMRIQASHSNSHIEALL--------KDESSERRGNKRPLKEDSMEEE 501
Query: 417 DAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYY 476
+ + D+V+L E G+K+RYYE KF+ K+ + + R V Y GLCWV+ YYY
Sbjct: 502 ETY-------DEVRLWEDGFKDRYYESKFDVKS--DNIDFRIRVAHEYVRGLCWVLRYYY 552
Query: 477 EGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHY 535
+G SW+WF+PYHYAPFASD ++ + FE G PFKP QL+GVFP ASS +P+ +
Sbjct: 553 QGCASWKWFFPYHYAPFASDFINIGNLSTQFEKGTQPFKPLEQLMGVFPPASSSHVPKSW 612
Query: 536 RKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEA 595
LM DP S I DFYP DF++D+NGK+++WQG+A LPF+DE RL + + LT E
Sbjct: 613 AVLMHDPLSSIIDFYPLDFKIDLNGKKFAWQGVALLPFVDEKRLFRALAPLYDLLTPAEK 672
Query: 596 RRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCA 655
RN+ D +++ +++ + + L E ++ E +E+ DGM G +
Sbjct: 673 IRNTQGDDKIYLGINNKGYSFLKNLYE-SQESTPNEAIEI-------CFDGMRGNVLHSK 724
Query: 656 G-DPHPPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVT---RPPAGVIFPKKIVQLEDL 711
H SP+ + I N V+ A Y+ P+ + GV+ P+++ L
Sbjct: 725 DFIGHLETLLSPLRDLPSIHENVVISAHYRNPNYSSDFIFKAKRLKGVVEPQRV-----L 779
Query: 712 KPAPVLWHEDSGRRPHENGRHNPHGTISGRQ---LGEAAHRLVANSLQHMKVDRNGY--- 765
KP + + ++ RP G + + + +A HR++ N + + GY
Sbjct: 780 KPGDLSFEQNRQWRPQ-------IGMVPSTKKAFVTDAGHRML-NHYNYESRNSGGYSSN 831
Query: 766 -GDRMHGSPLPYAAAPYVPPVPSYQEYGVYDQGYNRFSQPR 805
G R+ S P+++ + P Q Y GY+ PR
Sbjct: 832 RGGRVMSSYNPHSSYNFQTPQSHVQAY-----GYSTVGSPR 867
>gi|325186843|emb|CCA21388.1| 5'3' exoribonuclease putative [Albugo laibachii Nc14]
Length = 1023
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 289/717 (40%), Positives = 395/717 (55%), Gaps = 65/717 (9%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR++K+A + E+ + + G ++ + S+ +DSNVITPGT+FM+ L
Sbjct: 120 MNQQRARRFRSAKEAEERGEIEKEAIEYMKAMGHQVQEQDQSKNWDSNVITPGTKFMSKL 179
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S L++YI R+N + W+ IKVI SDA+VPGEGEHK+MS++RLQR+ PGYDPN H L+
Sbjct: 180 SKYLRFYIRERINQNEAWKSIKVIFSDASVPGEGEHKLMSFIRLQRSQPGYDPNQHHVLH 239
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAAN-CEGKAKRKAGEFD 179
GLDADLIML LATHEV+FSILRE V Q+ + Q L AN + K+K GE
Sbjct: 240 GLDADLIMLGLATHEVNFSILREEVLFGKQKYEKEKSNQQTILDANGTQDMRKKKRGEHG 299
Query: 180 EKGDEVV-VPKKPYQFLHIWTLREYLDYEFRIP---NPPFEIDLECIVDDFIFMCFFVGN 235
E +V+ + P QFLHI TLREYL++EF +P PF D E +VDDF+F+CFFVGN
Sbjct: 300 EHDADVIPTDQTPLQFLHIATLREYLEFEF-LPLAQTLPFPYDFERVVDDFVFLCFFVGN 358
Query: 236 DFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 295
DFLPH+P+L+IR+GA++ L+ +Y K L GYLTD + +L RV + VG+ ED +F
Sbjct: 359 DFLPHLPSLDIRDGALDFLILMYAKLLPTLNGYLTDAGEVNLSRVNAILAQVGAVEDEVF 418
Query: 296 QKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSE 355
+RA Q ++R ++ + + D + + V + +
Sbjct: 419 LRRA-AKQAESDRFRKNRFSNEKKDQIGAASVRSDAVEIQKKR----------------- 460
Query: 356 CVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDK 415
RLD + + A G E + +A++KE++ +
Sbjct: 461 ---RLDQTN-----------VIADAKYGGMSAE-------------QAIQARVKEMVDGQ 493
Query: 416 SDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYY 475
D + D V+LGEPGWK RYY +KF A K V+ Y EGLCWVM YY
Sbjct: 494 LDKHRQE--VNDVVRLGEPGWKARYYSDKFKADDIAHGGGKAK-VLQSYVEGLCWVMKYY 550
Query: 476 YEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHY 535
Y G SW WFYP+HYAPFASDL ++D+F ISF LG PF+PF QL+GVFP+AS HA+P+ Y
Sbjct: 551 YSGCASWNWFYPFHYAPFASDLVNIDKFTISFHLGQPFRPFEQLMGVFPAASGHAIPKPY 610
Query: 536 RKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEA 595
R L+ DP SPI DFYPT+ VD NGK W + LPFIDEARLL ++ L+ E
Sbjct: 611 RWLLRDPKSPIIDFYPTEIPVDPNGKPMPWLWVVLLPFIDEARLLQAMEPENEKLSALEK 670
Query: 596 RRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPC- 654
+RN + S D+ +K+ + V G Y+
Sbjct: 671 KRNQRYGKEIVFFHSDCRLTKDSLPDDQNTHVKVDTTISVS-------FSGALFYVEALH 723
Query: 655 --AGDPHPPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLE 709
G P + P M DI NQ Y P+ H+ + G + P+ I+ E
Sbjct: 724 FPLGCIVPSPEKKPRHFM-DISNNQCHSFQYLAPEKLPHICKLLRGAVRPQPILVSE 779
>gi|322801233|gb|EFZ21920.1| hypothetical protein SINV_00544 [Solenopsis invicta]
Length = 809
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 302/762 (39%), Positives = 420/762 (55%), Gaps = 75/762 (9%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQV-FDSNVITPGTEFMAV 59
MNQQRSRRFRASK+ + E ER+R E +G LPP+ + FDSN ITPGT FMA
Sbjct: 111 MNQQRSRRFRASKETMEKIDEIERIRSELTLKGASLPPEKPKEAHFDSNCITPGTPFMAR 170
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
LS L YYIH RLNNDPGW I+VILSDANVPGEGEHKIM ++R QR P +DPNT+H L
Sbjct: 171 LSACLHYYIHERLNNDPGWRNIQVILSDANVPGEGEHKIMDFIRRQRAQPDHDPNTQHVL 230
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
G DADLIML LATHE +F+I+RE F P + C +CGQ GH +C G + E +
Sbjct: 231 CGADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCDICGQLGHEMRDCTGAEPNQRPEEN 289
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
G E + + F+ + LREYL+ E +PN PF+ D E VDD++FMCFFVGNDFLP
Sbjct: 290 TFGSECL-----FIFVRLNVLREYLERELYMPNLPFKYDFERAVDDWVFMCFFVGNDFLP 344
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIREGAI+ L+A+YKK G +L G ED IF+KR
Sbjct: 345 HLPSLEIREGAIDRLVALYKKAVYKTGVHL------------------GDVEDEIFKKR- 385
Query: 300 RLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGR 359
Q +REK + +R + + + +P +F + L G P
Sbjct: 386 --QQNELAFRQREKDKKKRNEIISNFKP--TWIPAGQFAPNALGQGIKPK---------T 432
Query: 360 LDNGKGTSGRPHKVPR-LSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDA 418
+++ + + + + R ++ A A S T K K E +D SD
Sbjct: 433 IEDARHEAFKMRVMGRNYNTNAAQSTNANSALESMLTPENTGNRGQKRKHDECKQDNSD- 491
Query: 419 FNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEG 478
D+ D+V+L E G+K+RYYE KF+ + R +V L+Y GLCWV+ YYY+G
Sbjct: 492 ---DDQAHDEVRLWEDGFKDRYYESKFDVSP--DNFAFRNNVALQYVRGLCWVLRYYYQG 546
Query: 479 VCSWQWFYPYHYAPFASDLKDLDQFNISFELGH-PFKPFNQLLGVFPSASSHALPEHYRK 537
SW+W++PYHYAPFASD ++ + FE PF+P QL+GVFP+AS +PE + K
Sbjct: 547 CASWRWYFPYHYAPFASDFINIGGLSTEFEKNTVPFRPLEQLMGVFPAASRKHVPEPWAK 606
Query: 538 LMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARR 597
LMTDP S I DFYP DF++D+NGK+++WQG+A LPF+DE RL + +LTE E +R
Sbjct: 607 LMTDPKSQIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALAPYYDSLTEAEKKR 666
Query: 598 NSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI-----S 652
N D L+V + + I L +C + + VE+ +GM G + +
Sbjct: 667 NVRGDDRLYVGIGNKGYDFIKGLYTNC--IGFDKEVEIS-------VNGMRGTVLLSDDN 717
Query: 653 PCAGDPHPPVFRSPVASMEDIMGNQVLCAIYKLP---DAHKHVTRPPAGVIFPKKIVQLE 709
G P SPV + + N+V C +K P + + R G P ++++ +
Sbjct: 718 VSDGGTLP----SPVRGLP-VRNNKVYCIKFKDPQFGSNYTFLARKLKGAKEPPRVLKPQ 772
Query: 710 DLKPAPVLWHEDSGRRPHENGRHNPHGTISGRQLGEAAHRLV 751
D + + ++ G+ + G + S LG+A HR++
Sbjct: 773 DFE---AMNRKNGGQWTPQIGFTRSTQSAS---LGQAGHRML 808
>gi|195107132|ref|XP_001998170.1| GI23821 [Drosophila mojavensis]
gi|193914764|gb|EDW13631.1| GI23821 [Drosophila mojavensis]
Length = 793
Score = 490 bits (1262), Expect = e-135, Method: Compositional matrix adjust.
Identities = 290/727 (39%), Positives = 409/727 (56%), Gaps = 84/727 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAV 59
MNQQRSRRFRA+K+ + E ER+R E G KLPP K + FDSN ITPGT FM
Sbjct: 112 MNQQRSRRFRAAKETIEKRIEIERIRNELLTRGCKLPPEKEKGEHFDSNCITPGTPFMDR 171
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
LS L YYIH R+N +P W++I+VILSDANVPGEGEHKIM Y+R QR P +DPNT H L
Sbjct: 172 LSKCLHYYIHHRINTNPAWKRIQVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTHHVL 231
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
G DADLIML LATHE +F+I+RE F P + C +C Q GH C G + + +
Sbjct: 232 CGADADLIMLGLATHEPNFTIIRE-EFLPNKPRPCDVCNQFGHEMDKCVGLSAVGSSNCN 290
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
D + + + F+ + LREYL ++PN PF D E ++DD++FMCFFVGNDFLP
Sbjct: 291 FTPDIPIGAEVKFIFVRLSVLREYLKKTLQMPNLPFSYDFERVLDDWVFMCFFVGNDFLP 350
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIREGA++ L+ +YKK GYLTD + +L RV+ + +G+ ED+IF+ R
Sbjct: 351 HLPSLEIREGAVDRLVELYKKCVYKTKGYLTDSGEVNLDRVQLIMTDLGNVEDQIFKDRQ 410
Query: 300 RLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGR 359
R Q+ R KRE + + + + P ++ P A + Y+Q R
Sbjct: 411 RREQQFKARQKRENNNFKALE--QSVFGPSAVGPA--------AKAQIITNYKQEAASVR 460
Query: 360 LDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAF 419
+ + R S+ A++ D +EN +E
Sbjct: 461 MGSK-----------RSSTAASLD------------DDEENHDE---------------- 481
Query: 420 NSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGV 479
V+L E G+K RYYE KF+ +P+ + R V L+Y GLCWV+ YYY+G
Sbjct: 482 ---------VRLWEDGFKNRYYESKFDV-SPDNL-QFRYAVALQYVRGLCWVLKYYYQGC 530
Query: 480 CSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKL 538
SW W++PYHYAPFASD ++ + FE G PF P QL+GVFP+ASS +P+ + +L
Sbjct: 531 ASWNWYFPYHYAPFASDFVNIQGLSTIFEKGTKPFNPLEQLMGVFPAASSSHVPKPWAEL 590
Query: 539 MTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
M+ P+S I DFYP DF++D+NGK+++WQG+A LPF+DE RL + + LTEEE +RN
Sbjct: 591 MSKPDSTIIDFYPEDFKIDLNGKKFAWQGVALLPFVDENRLFKALIPLHSHLTEEEVKRN 650
Query: 599 SIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELS---DGMNGYISPCA 655
+ L++ P + +K+ + E+ +LS +GM G IS
Sbjct: 651 KKGENNLYISKFSPHYET------------VKKLYQKAEKSPNDLSISFNGMGGTISISE 698
Query: 656 GDPHPPVF-RSPVASMEDIMGNQVLCAIYKLPDAHKHVT----RPPAGVIFPKKIVQLED 710
+ F +SP+ + DI+ N+V+ +YK P + T R P V P +++Q ++
Sbjct: 699 INTAINGFMKSPIPGLPDIIKNEVITTVYKDPKYDEDFTFLAKRLPNAVD-PPQVIQSDN 757
Query: 711 LKPAPVL 717
K PV+
Sbjct: 758 NKNGPVI 764
>gi|407922574|gb|EKG15671.1| Zinc finger CCHC-type protein [Macrophomina phaseolina MS6]
Length = 1073
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 296/771 (38%), Positives = 416/771 (53%), Gaps = 79/771 (10%)
Query: 1 MNQQRSRRFRASKDA----ADSAAEEERL-RQEFEREGRKLPPKSD--------SQVFDS 47
MNQQRSRRFRA++DA AD+A + L Q+ R G + + +DS
Sbjct: 112 MNQQRSRRFRAAQDAKQKDADAAEFAKMLASQKKNRRGSGSDEDEEESAEAQIVKKTWDS 171
Query: 48 NVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRN 107
N ITPGT FM +L+ +L+Y+ +LN DPGWEK+KVI+SDA VPGEGEHKIM +VR QR
Sbjct: 172 NSITPGTPFMDILAKSLRYWCAYKLNTDPGWEKLKVIISDATVPGEGEHKIMEFVRSQRR 231
Query: 108 LPGYDPNTRHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAAN 166
P +DPNTRH +YGLDADLIML LATHE HF +LRE V F + C CGQ GH A
Sbjct: 232 SPFHDPNTRHVIYGLDADLIMLGLATHEPHFRVLREDVFFNDAKPRTCRRCGQTGHYADQ 291
Query: 167 CEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDF 226
C G+ K+K E D K ++V KKP+ +LH+ LREYL E + N F DLE +DD+
Sbjct: 292 CRGEMKKKEDEHDVKQNKVT--KKPFIWLHVSILREYLAAEMFVENQGFAFDLERALDDW 349
Query: 227 IFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQA 286
+FMCFFVGNDFLPH+P+LEIRE I+ L+ ++++ +GGY+T + R + ++
Sbjct: 350 VFMCFFVGNDFLPHLPSLEIREQGIDTLINIWRENIPRMGGYVTKDGHVDMNRAQLILEG 409
Query: 287 VGSYEDRIFQKRARLH-QRHAERIKREKAQ----------------------ARR----G 319
+ ED IF++R +R A + +R++ + AR+ G
Sbjct: 410 LAKLEDGIFKRRKETEDRREAAQKRRKQQEERRNGGGRGANGNGNQQHDSPTARKKRKGG 469
Query: 320 DDVEPLAQPDSLVP----------------VSR---FHGSRLASGPSPSPYQQSECVGR- 359
+ E A P V+R F G S S + + + +
Sbjct: 470 ETAEDFANMPMFSPAELQSKEARSLTHENFVNRKAIFQGQVNTSNKSAAAALKEGLMAKK 529
Query: 360 ---LDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKL--KELLRD 414
G G + P S A G ++ E EE ++ + +
Sbjct: 530 IESASIAAGIDGAGEEAPAQESDAPTGDVTATPPSALGKRKAEILEEDESSTPGRNTPVE 589
Query: 415 KSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 474
S A P +D V++ E G+ +RYYE+KF+ + E R V Y EGL WV+ Y
Sbjct: 590 DSPAAKPAEPPQDDVRMWEEGYADRYYEQKFHVDPKDI--EFRHQVARDYAEGLAWVLLY 647
Query: 475 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEH 534
Y++G SW W+YP+HYAPFA D DL + + FE G PF+P+ QL+GV P+AS+HA+PE
Sbjct: 648 YFQGCPSWTWYYPHHYAPFAQDFVDLGKMELKFEKGQPFRPYEQLMGVLPAASNHAIPEV 707
Query: 535 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 594
+R LM + +S I DFYP DF VD+NGK+ +WQG+A LPFIDE RLL + L+ EE
Sbjct: 708 FRPLMEEQDSDIIDFYPEDFVVDLNGKKMAWQGVAILPFIDEKRLLKAMNTKYPLLSAEE 767
Query: 595 ARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPC 654
RN D+L HPL +E +Q K++ E K +LNP++S+G+ G +
Sbjct: 768 HARNEFGKDVLLFSTRHPL------YEEVAQQWYSKKQGEPKHKLNPQISEGLAGEVEKN 821
Query: 655 AGDPHPPVFRSPVAS--MEDIMGNQVLCAIYKLPDAHK-HVTRPPAGVIFP 702
P+ + M D+ NQ + Y++P ++ H ++ GV FP
Sbjct: 822 EDYLPQSALEFPLETKGMPDLEENQSISVHYEMPKSNNIHKSQLLRGVKFP 872
>gi|170058238|ref|XP_001864833.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167877413|gb|EDS40796.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 884
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 285/682 (41%), Positives = 374/682 (54%), Gaps = 67/682 (9%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQV-FDSNVITPGTEFMAV 59
MNQQRSRRFRASK+AA+ A E ++R+E +G LPP+ + FDSN ITPGT FM
Sbjct: 111 MNQQRSRRFRASKEAAEKATEIAKIREELAAKGCILPPEKEKGAHFDSNCITPGTPFMDR 170
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
LS LQYY+H R+NN+PGW+ +KVILSDANVPGEGEHKIM Y+R QR P +DPNT H L
Sbjct: 171 LSKCLQYYVHDRMNNNPGWKGLKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTHHVL 230
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
G DADLIML LATHE HF+I+RE F P ++ C +C Q GH +C G K+
Sbjct: 231 CGADADLIMLGLATHETHFTIIRE-EFLPNKERPCDICQQMGHEMKDCAG---LKSARDC 286
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
E+ + + F+ + L+EYL E +PN PF D E ++DD++FMCFFVGNDFLP
Sbjct: 287 ERSPPPPGKETQFIFVRLNVLKEYLAKELDMPNLPFTYDFERVIDDWVFMCFFVGNDFLP 346
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIRE AI+ L+ +YKK GYLTD +L RVE + +G ED IF+ R
Sbjct: 347 HLPSLEIRENAIDRLVTLYKKCVYKTKGYLTDSGDVTLDRVELIMTDLGYAEDEIFRNRK 406
Query: 300 RLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGR 359
R ER KR K Q R + + H S+ A P
Sbjct: 407 VTEDRFKERNKRMKMQKER----------EQRPKFDQMHNSQFAPTP------------- 443
Query: 360 LDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAF 419
L G T A + +P++ F+ + S+
Sbjct: 444 ----------------LGRGQTPQAIV---------NPRQEAANFRMGGNNRNQQDSNQD 478
Query: 420 NSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGV 479
N D+V+L E G+K+RYYE KF+ + R+ V Y GLCWV+ YYY+G
Sbjct: 479 NQQPETPDEVRLWEDGFKDRYYESKFDVLPTNMK--FRQTVAWEYVRGLCWVLKYYYQGC 536
Query: 480 CSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLM 539
SW+W++PYHYAPFASD + L N F+ G PFKP QL+GVFP+AS +P + +LM
Sbjct: 537 ASWEWYFPYHYAPFASDFRTLQNVNKHFDRGTPFKPLQQLMGVFPAASRSHVPPAFAELM 596
Query: 540 TDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 599
DP SPI DFYP DF +D+NGK+++WQG+A LPF+DE RL LT+EE RN
Sbjct: 597 VDPKSPIIDFYPIDFHIDLNGKKFAWQGVALLPFVDEKRLFKATDPKVPELTQEERLRNE 656
Query: 600 IMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVK-ERLNPELSDGMNGYISPCAGDP 658
L++ + L + EV ER P L+ M G I P +
Sbjct: 657 NGLARLYLCSGSEAYRTARALYAN----------EVDYEREVPVLAGCMRGLIIPTLENI 706
Query: 659 HPP-VFRSPVASMEDIMGNQVL 679
V SP+ + + N+VL
Sbjct: 707 QQDGVLPSPIPGLHPVCENKVL 728
>gi|355563402|gb|EHH19964.1| 5'-3' exoribonuclease 2 [Macaca mulatta]
Length = 926
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 295/719 (41%), Positives = 399/719 (55%), Gaps = 87/719 (12%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 111 MNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + P +DPNT HCL
Sbjct: 171 AKCLRYYIADRLNNDPGWKNLTA------------------------QPNHDPNTHHCLC 206
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 207 GADADLIMLGLATHEPNFTIIREE-FKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDE 265
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 266 LADSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPH 325
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIRE AI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 326 LPSLEIRENAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKD 385
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSE 355
R K ++ + +R +P P ++ GS++AS P + Y+
Sbjct: 386 DEDSFRRRQKEKRKRMKRD---QPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYEM-- 440
Query: 356 CVGRLDNGKGTSGRPH-KVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRD 414
R+ N S P+ S + IG +AE+S
Sbjct: 441 ---RMQNNSSPSISPNTSFTSDGSPSPIGGIKRKAEDS---------------------- 475
Query: 415 KSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 474
+S+ ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ Y
Sbjct: 476 -----DSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRY 528
Query: 475 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPE 533
YY+G SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP
Sbjct: 529 YYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPP 588
Query: 534 HYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEE 593
+RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT E
Sbjct: 589 SWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPE 648
Query: 594 EARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISP 653
E RRNS+ D+LFV HPL I L Q E V+V PEL G+ G S
Sbjct: 649 ETRRNSLGGDVLFVGKHHPLHDFILEL----YQTGSTEPVDVP----PELCHGIQGKFSL 700
Query: 654 CAGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHV--------TRPPAGVIFP 702
P + SPV + D+ N V+ +K P A ++ R PA V+ P
Sbjct: 701 DEEAILPDQIVCSPVPMLRDLTQNTVVSINFKDPQFAEDYIFKAVMLPGARKPAAVLKP 759
>gi|310796685|gb|EFQ32146.1| XRN 5'-3' exonuclease [Glomerella graminicola M1.001]
Length = 1020
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 290/747 (38%), Positives = 402/747 (53%), Gaps = 56/747 (7%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSD-----SQVFDSNVITPGTE 55
MNQQRSRRFR++++A + +++ L + +++ + + FDSN ITPGT
Sbjct: 112 MNQQRSRRFRSAQEAQEKEEDKQELLKLLKQQSGGIVSNDSLESVTKKAFDSNSITPGTP 171
Query: 56 FMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNT 115
FM +L+ +L+Y+ +LN DP W ++K+I+SDA VPGEGEHKIM++VR QR P YDPNT
Sbjct: 172 FMDILAASLRYWCAYKLNTDPAWARLKIIISDATVPGEGEHKIMNFVRSQRISPDYDPNT 231
Query: 116 RHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKRK 174
RH +YGLDADLIML LATHE HF +LRE VF + K C LCGQ GH A C G+AK K
Sbjct: 232 RHVIYGLDADLIMLGLATHEPHFRVLREDVFFQDSKAKMCKLCGQKGHEARACRGQAKEK 291
Query: 175 AGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVG 234
GEFDE+ E KP+ +LH+ LREYL E +P PF DLE +DD++FMC FVG
Sbjct: 292 VGEFDEQ--EKGPALKPFIWLHVSILREYLAAELNVPGLPFRFDLERAIDDWVFMCCFVG 349
Query: 235 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI 294
NDFLPH+P LEIRE I+ L A++K +GGY+ L R + + + ED I
Sbjct: 350 NDFLPHLPALEIRENGIDTLTAIWKDNLPVMGGYVVKDGHVDLGRAQLILNGLAKQEDSI 409
Query: 295 FQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQS 354
F++R R KR K Q R A+P + A+G P+
Sbjct: 410 FKRRKETEDRREANFKRRKLQEERNPR---FAKPKQFDNAAAGLTLFPAAG-GPNGITHD 465
Query: 355 ECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEE---FKAKLKEL 411
VGR N + + + + + E S E D E E A K +
Sbjct: 466 MVVGRSSNMNANTANKSAASAIRE--QLKDLMSKPEPSQEVDSGEKASEEAPSTADQKSV 523
Query: 412 L--RDKSDAF-------------NSDNPEE----DKVKLGEPGWKERYYEEKFNAKTPEE 452
L R DA N+ + E D V++ E G+ +RYYE+KF+ +
Sbjct: 524 LGKRKAEDAAIQADSTPASVTGPNTPSAAEEAAVDHVRMWEEGYADRYYEQKFHVDRNDH 583
Query: 453 REETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHP 512
E R V Y EGL WV+ YY++G SW+W+YPYHYAPFA+D DLD+ ++ FE G
Sbjct: 584 --EFRHKVARAYVEGLSWVLLYYFQGCPSWEWYYPYHYAPFAADFVDLDKMDVRFEKGRI 641
Query: 513 FKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLP 572
KPF QL+ V P+AS ALPE + LM + +S + DFYPT+FE+D+NGK+ +WQG+A LP
Sbjct: 642 SKPFEQLMSVMPAASRSALPEVFHDLMLNEDSEVIDFYPTEFEIDLNGKKMAWQGVALLP 701
Query: 573 FIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSH-----PLSASIYTLDEHCKQL 627
FI+ RLL V+K L+ + RN + D+L + +H ++ S Y+ + L
Sbjct: 702 FIEMPRLLAAVEKKYPLLSAADQARNGVGRDVLLLSDAHHELYDEITTSFYSKKQGAPTL 761
Query: 628 KIKERVEVKERLNPELSDGMNGYISPCAG-DPHPP-VFRSPVASMEDIMGNQVLCAIYKL 685
K LNP SDG+ G + PH V+ M ++ ++ L Y
Sbjct: 762 K----------LNPRTSDGLAGNVEKIPDYLPHGELVYPLERGEMPNLDYDRSLRVWYTF 811
Query: 686 P-DAHKHVTRPPAGVIFPKKIVQLEDL 711
P +H H + GV P + D+
Sbjct: 812 PSSSHPHKSMLLRGVKLPAPALDRNDI 838
>gi|389640341|ref|XP_003717803.1| 5'-3' exoribonuclease 2 [Magnaporthe oryzae 70-15]
gi|351640356|gb|EHA48219.1| 5'-3' exoribonuclease 2 [Magnaporthe oryzae 70-15]
Length = 1020
Score = 487 bits (1253), Expect = e-134, Method: Compositional matrix adjust.
Identities = 298/748 (39%), Positives = 410/748 (54%), Gaps = 64/748 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFERE-GRKLPPKSDSQV----FDSNVITPGTE 55
MNQQRSRRFR++++A + A ++ L + +++ G + ++ V FD+N ITPGT
Sbjct: 112 MNQQRSRRFRSAQEAKEKAEDKLELLKLLKQQKGGDVSAETLESVTKKAFDTNSITPGTP 171
Query: 56 FMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNT 115
FM +L+ +L+Y+ +LN DPGW +K+I+SDA VPGEGEHKIM +VR QR+ P +DPNT
Sbjct: 172 FMDILAGSLRYWCAYKLNTDPGWANVKIIISDATVPGEGEHKIMDFVRSQRSSPDHDPNT 231
Query: 116 RHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRK 174
RH +YGLDADLIML LATHE HF +LRE V F G+ C LCGQ GH A C+G+ K+K
Sbjct: 232 RHVIYGLDADLIMLGLATHEPHFRVLREDVFFQQGKPRLCKLCGQKGHDAQQCKGEVKKK 291
Query: 175 AGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVG 234
GEFDEK + P KP+ +LH+ LREYL+ E +P+ PF DLE VDD+IF+C FVG
Sbjct: 292 EGEFDEKQN--AEPLKPFIWLHVAILREYLNVELYVPDLPFRFDLERAVDDWIFLCCFVG 349
Query: 235 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI 294
NDFLPH+P LEIRE I L +++K+ +GGY+T L RV++ + + ED I
Sbjct: 350 NDFLPHLPALEIRENGIITLTSIWKQNLPRMGGYVTKDGHIDLERVQYIMDGLAKQEDSI 409
Query: 295 FQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQS 354
F+KR R KR K Q R G+ A+GP S ++
Sbjct: 410 FRKRKEQEDRRDANAKRRKMQDDRAK-----------------WGNNSANGPHVSEPAKA 452
Query: 355 ------------ECVGRLDNGKGTSGRPHKVPRLSSGATIGAA----IVEAENSFETDPQ 398
+ + N S ++ + S A +A + E S ET P
Sbjct: 453 ITHDMVVNRAAAQVDANVANKSAASMLKSQLKAMQSQAPEASAPETPVKEGAASEETTPA 512
Query: 399 ENKEEFKAKLKELLRDKSDAFNSDNP---------EEDKVKLGEPGWKERYYEEKFNAKT 449
+ KA L E S A NS P D V+L E G+ +RYYE+KF+
Sbjct: 513 SALGKRKAALME--DGDSPAPNSPTPGTPASGNGEAVDTVRLWEDGYTDRYYEQKFHVDP 570
Query: 450 PEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFEL 509
+ E R V Y EGL WV+ YY++G SW+WFYPYHYAPFA D L ISFE
Sbjct: 571 --KNVEFRHKVAHAYVEGLSWVLLYYFQGCPSWEWFYPYHYAPFAQDFVGLKDLEISFEK 628
Query: 510 GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIA 569
G KP+ QL+ V P+AS LP + LMT +S I DFYP DFEVD+NGK+++WQG+A
Sbjct: 629 GRKSKPYEQLMSVLPAASRDNLPPIFHDLMTKEDSEIIDFYPEDFEVDLNGKKFAWQGVA 688
Query: 570 KLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKI 629
LPFI+ RLL V+ L+ +EA RN + D+L + +H A +Y D+
Sbjct: 689 LLPFIEMDRLLAAVQAKYPELSADEAARNGLGRDVLIISDAH---APLY--DDLITNFYS 743
Query: 630 KERVEVKERLNPELSDGMNGYISPCAG-DPH-PPVFRSPVASMEDIMGNQVLCAIYKLPD 687
K + +L+ + SD + G + PH V+ M D+ ++ L Y +P
Sbjct: 744 KRQTGSTYKLDQKNSDLLAGVVEKLPDYLPHGALVYPLERKCMPDVEYDRSLTVYYDMPQ 803
Query: 688 AHKHVTRPPAGVIFPKKIV---QLEDLK 712
A H + G+ P + ++DLK
Sbjct: 804 AVAHKSMLLRGLKMPTPALTRHDIDDLK 831
>gi|380484893|emb|CCF39710.1| XRN 5'-3' exonuclease [Colletotrichum higginsianum]
Length = 1015
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 267/673 (39%), Positives = 374/673 (55%), Gaps = 31/673 (4%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSD-----SQVFDSNVITPGTE 55
MNQQRSRRFR++++A + +++ L + +++ + + FDSN ITPGT
Sbjct: 112 MNQQRSRRFRSAQEAQEKEEDKQELLKLLKQQNGGVVSDDSLESVTKKAFDSNSITPGTP 171
Query: 56 FMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNT 115
FM +L+ +L+Y+ +LN DP W K+K+I+SDA VPGEGEHKIM++VR QR P +DPNT
Sbjct: 172 FMDILAASLRYWCAYKLNTDPAWAKLKIIISDATVPGEGEHKIMNFVRSQRISPDFDPNT 231
Query: 116 RHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRK 174
RH +YGLDADLIML LATHE HF +LRE V F + C LCGQ GH A C G+AK K
Sbjct: 232 RHVIYGLDADLIMLGLATHEPHFRVLREDVFFQDSKARMCKLCGQKGHEARACRGQAKEK 291
Query: 175 AGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVG 234
GEFDE+ + + KP+ +LH+ LREYL E +P PF DLE +DD++FMC FVG
Sbjct: 292 VGEFDEQEKNLAL--KPFIWLHVSILREYLAAELNVPGLPFRFDLERAIDDWVFMCCFVG 349
Query: 235 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI 294
NDFLPH+P LEIRE I+ L A++K +GGY+ L R + + + ED I
Sbjct: 350 NDFLPHLPALEIRENGIDTLTAIWKDNLPFMGGYVVKDGHVDLGRAQLILNGLAKQEDAI 409
Query: 295 FQKRARLHQRHAERIKREKAQARRG------DDVEPLAQPDSLVP-------VSRFHGSR 341
F++R R KR K Q R V+ A +L P ++
Sbjct: 410 FKRRKETEDRKEASFKRRKLQEERNPRFAKPKQVDNAAAGLTLFPAAGGPNGITHDMVVG 469
Query: 342 LASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENK 401
+S + + +S D KG + +G + + +
Sbjct: 470 RSSNMNANTANKSAASAIRDQLKGLMSKTEPGQAADAGEKANGEVPSTPDQKSVLGKRKA 529
Query: 402 EEFKAKLKELLRDKSDAFNSDNPEE---DKVKLGEPGWKERYYEEKFNAKTPEEREETRK 458
EE A+ + EE D V++ E G+ +RYYE+KF+ + E R
Sbjct: 530 EEAAAQAGSTPASATGPSTPSAAEEAAVDHVRMWEEGYADRYYEQKFHVDRSD--HEFRH 587
Query: 459 DVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQ 518
V Y EGL WV+ YY++G SW+W+YPYHYAPFA+D DLD+ + FE G KPF Q
Sbjct: 588 KVARAYVEGLSWVLLYYFQGCPSWEWYYPYHYAPFAADFVDLDKMEVQFEKGRISKPFEQ 647
Query: 519 LLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEAR 578
L+ V P+AS ALPE + LM + +S + DFYPT+FE+D+NGK+ +WQG+A LPFI+ R
Sbjct: 648 LMSVMPAASRSALPEVFHDLMLNEDSEVIDFYPTEFEIDLNGKKMAWQGVALLPFIEMPR 707
Query: 579 LLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKER 638
LL V+K L+ + RN + D+L + +H +Y DE K++ +
Sbjct: 708 LLAAVEKKYPLLSAADQARNGVGRDVLLLSDAH---HELY--DEITTGFYSKKQGAPTLK 762
Query: 639 LNPELSDGMNGYI 651
LNP SDG+ G +
Sbjct: 763 LNPRTSDGLAGNV 775
>gi|440466364|gb|ELQ35636.1| 5'-3' exoribonuclease 2 [Magnaporthe oryzae Y34]
gi|440487857|gb|ELQ67622.1| 5'-3' exoribonuclease 2 [Magnaporthe oryzae P131]
Length = 1041
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 298/748 (39%), Positives = 410/748 (54%), Gaps = 64/748 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFERE-GRKLPPKSDSQV----FDSNVITPGTE 55
MNQQRSRRFR++++A + A ++ L + +++ G + ++ V FD+N ITPGT
Sbjct: 133 MNQQRSRRFRSAQEAKEKAEDKLELLKLLKQQKGGDVSAETLESVTKKAFDTNSITPGTP 192
Query: 56 FMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNT 115
FM +L+ +L+Y+ +LN DPGW +K+I+SDA VPGEGEHKIM +VR QR+ P +DPNT
Sbjct: 193 FMDILAGSLRYWCAYKLNTDPGWANVKIIISDATVPGEGEHKIMDFVRSQRSSPDHDPNT 252
Query: 116 RHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRK 174
RH +YGLDADLIML LATHE HF +LRE V F G+ C LCGQ GH A C+G+ K+K
Sbjct: 253 RHVIYGLDADLIMLGLATHEPHFRVLREDVFFQQGKPRLCKLCGQKGHDAQQCKGEVKKK 312
Query: 175 AGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVG 234
GEFDEK + P KP+ +LH+ LREYL+ E +P+ PF DLE VDD+IF+C FVG
Sbjct: 313 EGEFDEKQN--AEPLKPFIWLHVAILREYLNVELYVPDLPFRFDLERAVDDWIFLCCFVG 370
Query: 235 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI 294
NDFLPH+P LEIRE I L +++K+ +GGY+T L RV++ + + ED I
Sbjct: 371 NDFLPHLPALEIRENGIITLTSIWKQNLPRMGGYVTKDGHIDLERVQYIMDGLAKQEDSI 430
Query: 295 FQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQS 354
F+KR R KR K Q R G+ A+GP S ++
Sbjct: 431 FRKRKEQEDRRDANAKRRKMQDDRAK-----------------WGNNSANGPHVSEPAKA 473
Query: 355 ------------ECVGRLDNGKGTSGRPHKVPRLSSGATIGAA----IVEAENSFETDPQ 398
+ + N S ++ + S A +A + E S ET P
Sbjct: 474 ITHDMVVNRAAAQVDANVANKSAASMLKSQLKAMQSQAPEASAPETPVKEGAASEETTPA 533
Query: 399 ENKEEFKAKLKELLRDKSDAFNSDNP---------EEDKVKLGEPGWKERYYEEKFNAKT 449
+ KA L E S A NS P D V+L E G+ +RYYE+KF+
Sbjct: 534 SALGKRKAALME--DGDSPAPNSPTPGTPASGNGEAVDTVRLWEDGYTDRYYEQKFHVDP 591
Query: 450 PEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFEL 509
+ E R V Y EGL WV+ YY++G SW+WFYPYHYAPFA D L ISFE
Sbjct: 592 --KNVEFRHKVAHAYVEGLSWVLLYYFQGCPSWEWFYPYHYAPFAQDFVGLKDLEISFEK 649
Query: 510 GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIA 569
G KP+ QL+ V P+AS LP + LMT +S I DFYP DFEVD+NGK+++WQG+A
Sbjct: 650 GRKSKPYEQLMSVLPAASRDNLPPIFHDLMTKEDSEIIDFYPEDFEVDLNGKKFAWQGVA 709
Query: 570 KLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKI 629
LPFI+ RLL V+ L+ +EA RN + D+L + +H A +Y D+
Sbjct: 710 LLPFIEMDRLLAAVQAKYPELSADEAARNGLGRDVLIISDAH---APLY--DDLITNFYS 764
Query: 630 KERVEVKERLNPELSDGMNGYISPCAG-DPH-PPVFRSPVASMEDIMGNQVLCAIYKLPD 687
K + +L+ + SD + G + PH V+ M D+ ++ L Y +P
Sbjct: 765 KRQTGSTYKLDQKNSDLLAGVVEKLPDYLPHGALVYPLERKCMPDVEYDRSLTVYYDMPQ 824
Query: 688 AHKHVTRPPAGVIFPKKIV---QLEDLK 712
A H + G+ P + ++DLK
Sbjct: 825 AVAHKSMLLRGLKMPTPALTRHDIDDLK 852
>gi|294884783|gb|ADF47407.1| exoribonuclease-2, partial [Dugesia japonica]
Length = 801
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 287/691 (41%), Positives = 384/691 (55%), Gaps = 73/691 (10%)
Query: 35 KLP-PKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGE 93
KLP PKS S+ FDSN ITPGT FMA L+IALQYY++ +LN+DPGW+ I+VILSDAN PGE
Sbjct: 2 KLPEPKSASEHFDSNCITPGTPFMARLTIALQYYVYNKLNSDPGWKNIQVILSDANAPGE 61
Query: 94 GEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDK 153
GEHKIM Y+R QR P +DPNT+HCL G DADLIML LATHE +F+I+RE F P Q
Sbjct: 62 GEHKIMDYIRRQRASPTHDPNTKHCLCGADADLIMLGLATHEPYFTIIREE-FKPNQPRP 120
Query: 154 CFLCGQPGHLAANCEGKAKRKAGEFD----EKGDEVVVPKKPYQFLHIWTLREYLDYEFR 209
C +CGQ H+ C G + EF+ KG E + F+H+ TLREYL E
Sbjct: 121 CEICGQMDHVMTECAGLP---SAEFNIAANNKGSET-----EFIFIHLNTLREYLQQELV 172
Query: 210 IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYL 269
IPN F+ D E VDD++FMCFFVGNDFLPH+P+LEIRE AI+ L+ +YK G+L
Sbjct: 173 IPNLHFQYDFERAVDDWVFMCFFVGNDFLPHLPSLEIREKAIDRLITIYKSSVSKTNGWL 232
Query: 270 TDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPD 329
TD K ++ RV+ ++ + ED IF+ R R + + + +R
Sbjct: 233 TDSGKVNISRVQLIMKDLALLEDEIFKNRRENEVSFRRRNRENRNRTKR----------Q 282
Query: 330 SLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEA 389
L + F+ Q S L +G+ R S + AI+E+
Sbjct: 283 KLNENAMFN-------------QHSTDFVNLSSGE----------RFSRDSFKNNAIMES 319
Query: 390 ENSF--ETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDK---VKLGEPGWKERYYEEK 444
+N+ + PQ +A K D D + N E DK VKL E G++ RYY+ K
Sbjct: 320 KNNLNKQVGPQVPASNTRAPAKRKFDDDIDPEDKKNEELDKRDEVKLWEDGYRSRYYQSK 379
Query: 445 FNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFN 504
F +E + +V +Y GLCWV+ YYY+G SW W+YPYHYAPFA D +L + +
Sbjct: 380 FGVSV-DENPDFCVNVAHQYLRGLCWVLAYYYQGCVSWTWYYPYHYAPFAVDFVNLSEAD 438
Query: 505 ISFE-LGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRY 563
++FE PF P QL+GVFP+ S +P ++ LMTD SP+ D YPT+F++D+NGKRY
Sbjct: 439 VTFEKKTKPFNPLEQLMGVFPADSKSHVPPVWQDLMTDSESPVIDLYPTNFKIDLNGKRY 498
Query: 564 SWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHP---LSASIYTL 620
W G+A LPF+DE RLL +K+ LTE+E RN I D FV HP L IY L
Sbjct: 499 DWMGVALLPFVDEVRLLQVLKERYSMLTEDEKERNVIGPDRYFVRSDHPVADLIKVIYEL 558
Query: 621 DEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHP-PVFRSPVA-SMEDIMGNQV 678
+++ + ++P L++G+ G I P SP+ S EDI QV
Sbjct: 559 EDNSDSV-----------IDPSLTNGVVGRIWKDLKSYQPGSTVNSPITGSCEDIPAVQV 607
Query: 679 LCAIYKLPDAHK---HVTRPPAGVIFPKKIV 706
+ YK P K + R VI P+ +
Sbjct: 608 ISCFYKDPQYQKDFVFLARLLEKVIIPEPTI 638
>gi|195471641|ref|XP_002088111.1| GE14198 [Drosophila yakuba]
gi|194174212|gb|EDW87823.1| GE14198 [Drosophila yakuba]
Length = 897
Score = 483 bits (1244), Expect = e-133, Method: Compositional matrix adjust.
Identities = 298/757 (39%), Positives = 410/757 (54%), Gaps = 85/757 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAV 59
MNQQRSRRFRA+K+ + E R+R+E G KLPP K + FDSN ITPGT FM
Sbjct: 112 MNQQRSRRFRAAKETTEKRLEIARIREELMSRGCKLPPEKEKGEHFDSNCITPGTPFMDR 171
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
LS L Y++H RLNN+P W+ IKVILSDANVPGEGEHKIM Y+R QR P +DPNT+H L
Sbjct: 172 LSKCLHYFVHDRLNNNPAWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHVL 231
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
G DADLIML LATHE +F+I+RE F P + C +C GH C G
Sbjct: 232 CGADADLIMLGLATHEPNFTIIRE-EFLPNKPRPCDICNGFGHEMDKCVGLGATAPTSAS 290
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
K D + + + F+ + LREYL +PN PFE E +DD++FMCFFVGNDFLP
Sbjct: 291 FKPDVPIGAEVKFIFVRLSVLREYLKQTLEMPNLPFEYSFERALDDWVFMCFFVGNDFLP 350
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIREGA++ L+ +YKK GYLT +L RV+ + +G+ ED+IF+ R
Sbjct: 351 HLPSLEIREGAVDRLVELYKKCVYKTKGYLTTSGDVNLDRVQLIMTDLGNAEDQIFKSRQ 410
Query: 300 RLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGR 359
R ++ R K K Q R D HGS
Sbjct: 411 RREEQFKTRDKCRKRQERNQD-----------------HGSL------------------ 435
Query: 360 LDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLR--DKSD 417
+ ++ GA+ V NS + KEE A L+ R D+++
Sbjct: 436 ------------------NQSSFGASAV-GPNSQQKSVGNYKEE-AAALRNRKRTGDQAN 475
Query: 418 AFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYE 477
+ D + D+V+L E G+K+RYYE KF+ ++ R V L+Y GLCWV+ YYY+
Sbjct: 476 LDDDDEEDNDEVRLWEDGFKDRYYESKFDVAPGN--QQFRYAVALQYVRGLCWVLKYYYQ 533
Query: 478 GVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYR 536
G SW W++PYHYAPFASD ++ + +FE G PF P QL+GVFP+ASS +PE +
Sbjct: 534 GCSSWNWYFPYHYAPFASDFVNIQGLSTAFEKGTKPFNPLEQLMGVFPAASSSHVPEPWA 593
Query: 537 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 596
KLM+DP SPI DFYP DF++D+NGK+++WQG+A LPF+DE RL + LT EE
Sbjct: 594 KLMSDPESPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALVPYYDQLTGEEVT 653
Query: 597 RNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAG 656
RN + L++ P H K++K + + + DGM G +
Sbjct: 654 RNKRGDNYLYITNQSP----------HYKKVKKVSQKDDENVCKAISFDGMRGTLGQTKL 703
Query: 657 DPHPP-VFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLED-LKPA 714
+ + +SP++ + DI N + +K P+ IF K +LE+ + P
Sbjct: 704 NTAISGILKSPISGLSDIHDNITVTTTFKDPEYDDD-------YIFEAK--RLENAVDPP 754
Query: 715 PVLWHEDSGRRPHENGRHNPHGTISGRQLGEAAHRLV 751
VL +E SG + N H T + + ++ HR++
Sbjct: 755 QVLPNEQSGNKYRPVIGFNSHLTRA--YVPDSGHRML 789
>gi|194862714|ref|XP_001970086.1| GG10442 [Drosophila erecta]
gi|190661953|gb|EDV59145.1| GG10442 [Drosophila erecta]
Length = 902
Score = 483 bits (1244), Expect = e-133, Method: Compositional matrix adjust.
Identities = 283/700 (40%), Positives = 378/700 (54%), Gaps = 89/700 (12%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAV 59
MNQQRSRRFRA+K+ + E R+R+E G KLPP K + FDSN ITPGT FM
Sbjct: 112 MNQQRSRRFRAAKETTEKRLEIARIREELLSRGCKLPPEKEKGEHFDSNCITPGTPFMDR 171
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
LS L Y++H RLNN+P W+ IKVILSDANVPGEGEHKIM ++R QR P +DPNT+H L
Sbjct: 172 LSKCLHYFVHDRLNNNPAWKGIKVILSDANVPGEGEHKIMDFIRKQRAQPDHDPNTQHVL 231
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
G DADLIML LATHE +F+I+RE F P + C +C GH C G +
Sbjct: 232 CGADADLIMLGLATHEPNFTIIRE-EFLPNKPRPCDICNGFGHEMDKCVGLGATAPTGAN 290
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
K D + + + F+ + LREYL +PN PFE E +DD++FMCFFVGNDFLP
Sbjct: 291 FKPDVPIGAEVKFIFVRLSVLREYLKQTLEMPNLPFEYSFERALDDWVFMCFFVGNDFLP 350
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIREGA++ L+ +YKK GYLTD +L RV+ + +G+ ED+IF+ R
Sbjct: 351 HLPSLEIREGAVDRLVELYKKCVYKTKGYLTDSGDVNLDRVQLIMTDLGNAEDQIFKSRQ 410
Query: 300 RLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPS---PYQQSEC 356
R ++ R K K Q R D HGS S S P Q
Sbjct: 411 RREEQFKARDKARKRQERNQD-----------------HGSLNQSAFGASAVGPNSQQRS 453
Query: 357 VGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLR--D 414
VG N +E A L+ R D
Sbjct: 454 VG-----------------------------------------NYKEEAAALRNRKRTID 472
Query: 415 KSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 474
+++ + + D+V+L E G+K+RYYE KF+ + ++ R V L+Y GLCWV+ Y
Sbjct: 473 QANLDEDEEEDNDEVRLWEDGFKDRYYESKFDVASGN--QQFRYAVALQYVRGLCWVLKY 530
Query: 475 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPE 533
YY+G SW W++PYHYAPFASD ++ + FE G PF P QL+GVFP+ASS +PE
Sbjct: 531 YYQGCASWNWYFPYHYAPFASDFVNIQGLSTMFEKGTKPFNPLEQLMGVFPAASSSHVPE 590
Query: 534 HYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEE 593
+ KLM+DP SPI DFYP DF++D+NGK+++WQG+A LPF+DE RL + LT E
Sbjct: 591 PWAKLMSDPESPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALVPYYDQLTGE 650
Query: 594 EARRNSIMADMLFVLLSHP-----LSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMN 648
E +RN + L++ P S D CK + DGM
Sbjct: 651 EVKRNKRGDNYLYISNQSPHYKKVKKVSSKDDDSVCKAISF---------------DGMR 695
Query: 649 GYISPCAGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPD 687
G + + + RSP++ + DI N + +K P+
Sbjct: 696 GTLGKTELNTAISGILRSPISGLSDINDNITVTTTFKDPE 735
>gi|448107650|ref|XP_004205418.1| Piso0_003664 [Millerozyma farinosa CBS 7064]
gi|448110652|ref|XP_004201682.1| Piso0_003664 [Millerozyma farinosa CBS 7064]
gi|359382473|emb|CCE81310.1| Piso0_003664 [Millerozyma farinosa CBS 7064]
gi|359383238|emb|CCE80545.1| Piso0_003664 [Millerozyma farinosa CBS 7064]
Length = 993
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 274/747 (36%), Positives = 415/747 (55%), Gaps = 73/747 (9%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPK-SDSQVFDSNVITPGTEFMAV 59
MNQQRSRRFR+++DA + E+ER E E G + + +DSN ITPGT FM
Sbjct: 107 MNQQRSRRFRSAQDAKIAHEEKERQINERELRGEMIDEAIKGKKSWDSNAITPGTPFMDR 166
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
L++AL+Y++ +L+ +PGW ++VI+SDA VPGEGEHK+MS++R QR+ P Y+PNT HC+
Sbjct: 167 LALALRYWVAYKLSTEPGWANLQVIISDATVPGEGEHKLMSFIRSQRSDPEYNPNTSHCI 226
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
YGLDADLI L LATHE HF +LRE VF Q + ++ + + K+K
Sbjct: 227 YGLDADLIFLGLATHEPHFRVLREDVF--ANQSRQLRVSDQLSMSEDQKDALKKKE---- 280
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
+KP+ +LH+ LREYL+ E P F DLE +DD++F+CFF GNDFLP
Sbjct: 281 --------ERKPFLWLHLNVLREYLEIELYNPYISFPFDLERAIDDWVFICFFAGNDFLP 332
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+L++R+ I+ L+ +K+ L Y+T +L VE ++ + S ED IF++
Sbjct: 333 HLPSLDVRDNGIDNLVRCWKRILPKLSDYITCDGNLNLESVEKLLEGLASKEDEIFRR-- 390
Query: 300 RLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPY-------- 351
+H + +++E+ + RR + + D + + + S+++ G +P
Sbjct: 391 ----KHEQELRQEENERRRKETL------DEEKALKKRYVSQISKGHDKAPLYADVNMPL 440
Query: 352 -----QQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKA 406
+ + +L N + R + A A+ + +S E + +
Sbjct: 441 LTTSGENVDGFAQLSNKDIVANRDIITKANMANANAAEALKKLLDSKSNKANEGQISASS 500
Query: 407 KLKELLRDKSDAFNSDNP-----------------EEDKVKLGEPGWKERYYEEKFNAKT 449
L + + KS+ N DN + DK+++ EPG++ERYY+ KF+ +
Sbjct: 501 ALNQEIDSKSETENGDNNRKRGFDEVQSDSDDQRLDNDKIRMWEPGYRERYYKSKFHITS 560
Query: 450 PEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQF----NI 505
E+ ++ RKD+V Y EG+ WV+ YYY+G SWQW+YPYHYAPFA+D K++ + I
Sbjct: 561 EEDIDKVRKDMVKHYLEGISWVLLYYYQGCPSWQWYYPYHYAPFAADFKNIREIVGEEGI 620
Query: 506 SFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSW 565
+F+LG PF+P+ QL+ V P+AS H LPE +RKLM+DP S I DFYP +FE+DMNGK+ SW
Sbjct: 621 TFKLGQPFRPYEQLMSVLPAASGHNLPEVFRKLMSDPESEIIDFYPEEFEIDMNGKKMSW 680
Query: 566 QGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCK 625
QGIA LPFIDE RLL+ V+K LTE E RN++ ++L + H + + CK
Sbjct: 681 QGIALLPFIDEKRLLEAVQKKYELLTEAEKERNTLKDEVLIISKQHKMYETF------CK 734
Query: 626 QLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSPV--ASMEDIMGNQVLCAIY 683
+L K + EV+ G+ G + A D + VF+ P+ M D+ L +
Sbjct: 735 ELYEKSQNEVEFSFG---KTGLAGGVRKAAFDIN-GVFKYPLNQGEMGDLDNRNFLLLFF 790
Query: 684 KLPDAHKHVTRPPAGVIFPKKIVQLED 710
+P + G I K++ ED
Sbjct: 791 HVPQKKHGKSMILNGYIPHTKVLNQED 817
>gi|320584179|gb|EFW98390.1| 5'-3' exoribonuclease, putative [Ogataea parapolymorpha DL-1]
Length = 967
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 261/640 (40%), Positives = 370/640 (57%), Gaps = 57/640 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLP-PKSDSQVFDSNVITPGTEFMAV 59
MNQQRSRRFR+++DAA + E ER QE E G ++ + +DSN ITPGT FM +
Sbjct: 110 MNQQRSRRFRSARDAALAQEELERQIQEREMRGEEIDLAIKGKKSWDSNSITPGTPFMDI 169
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
L+ +L+Y++ +L NDPGW ++VI+SDA VPGEGEHKIM+++R QR+ P Y+PNT HC+
Sbjct: 170 LARSLRYWVAYKLANDPGWASLQVIISDATVPGEGEHKIMNFIRSQRSDPEYNPNTTHCI 229
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQ-QDKCFLCGQPGHLAANCEGKAKRKAGEF 178
YGLDADLI L LATHE HF +LRE VF Q Q + L Q N + +++
Sbjct: 230 YGLDADLIFLGLATHEPHFKVLREDVFAKDQAQRQLKLADQ-----VNMDEATRQRLLAA 284
Query: 179 DEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFL 238
D+K KP+ +LH+ LREYL+ E IP F DLE +DD++FMCFFVGNDFL
Sbjct: 285 DQK--------KPFLWLHVSILREYLEVELNIPRLSFNFDLERAIDDWVFMCFFVGNDFL 336
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF--- 295
PH+P+L++R+ I++L+ ++K+ ++ YLT K +L VE + + ED IF
Sbjct: 337 PHLPSLDVRDNGIDILVDIWKRVLPSMKDYLTCDGKLNLEGVETLMSHLAQKEDEIFRKR 396
Query: 296 ----------QKRARLHQRHAERIKREKAQ-ARRGDDVEPLAQPDSLVPVSRFHGSRLAS 344
KR +L + +K + + +G + P+ +P + L +
Sbjct: 397 YEGERRREENDKRRKLEREQTNAVKNQLLKTVTKGKEKAPI------MPTQNMTLTSLTT 450
Query: 345 GPSPSPYQQ--SECVGRLDNGKGTSGRPHKVPRLSSGATIG-------AAIVEAENSFET 395
G + + SE V ++ + V + A A+ V E
Sbjct: 451 GETAGGLKMTNSEIVQNINTISKANAANKNVADILKKALFNNTEANGNASAVSVVKEAEI 510
Query: 396 DPQENKEEFKAKLKELLRDKSDAFNSDNPEED--------KVKLGEPGWKERYYEEKFNA 447
+ QE + E R S AFNSD+ + D ++L EPG+K RYY++KF
Sbjct: 511 EEQE-----PIDVSEKKRSASAAFNSDSEQSDAEVIDTTDSIRLWEPGYKTRYYQQKFET 565
Query: 448 KTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISF 507
EE E+ RKD+V Y EG+ W + YY++G SW W+YPYHYAPFA+D +L + F
Sbjct: 566 TDAEEIEKIRKDMVRCYVEGISWALLYYFQGCPSWNWYYPYHYAPFAADFTNLSDIKVEF 625
Query: 508 ELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQG 567
+ G PF+PF QL+ V P+AS H LPE +R LM++P+S I DFYPTDF++DMNG + +WQG
Sbjct: 626 KQGTPFRPFEQLMSVLPAASGHNLPEVFRPLMSEPHSEIIDFYPTDFKIDMNGAKMAWQG 685
Query: 568 IAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
I LPFIDE RLL V++ LTE E RN+ ++LF+
Sbjct: 686 ICLLPFIDETRLLKTVREKYSELTEYEIERNTNRNEVLFL 725
>gi|157138197|ref|XP_001664171.1| 5'-3' exoribonuclease, putative [Aedes aegypti]
gi|108880656|gb|EAT44881.1| AAEL003800-PA [Aedes aegypti]
Length = 958
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 292/693 (42%), Positives = 391/693 (56%), Gaps = 55/693 (7%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQV-FDSNVITPGTEFMAV 59
MNQQRSRRFRASK+AA+ AAE +++R E +G LPP+ + FDSN ITPGT FM
Sbjct: 111 MNQQRSRRFRASKEAAEKAAEVQKIRDELRAKGCILPPEKEKGAHFDSNCITPGTPFMDR 170
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
LS LQYY+H R+NN+PGW+ +K+ILSDANVPGEGEHKIM Y+R QR P +DPNT H L
Sbjct: 171 LSKCLQYYVHDRMNNNPGWKGLKIILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTHHVL 230
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
G DADLIML LATHE HF+I+RE F P ++ C +C GH +C G
Sbjct: 231 CGADADLIMLGLATHETHFTIIRE-EFLPNKERPCDICQIMGHEMKDCTG--------LQ 281
Query: 180 EKGDEVVVPKKP-----YQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVG 234
+ D P P Y F+ + L+EYL E +PN PF+ D E ++DD++FMCFFVG
Sbjct: 282 SERDINRTPPPPGAETQYIFVRLNVLKEYLAKELDMPNLPFKYDFERVIDDWVFMCFFVG 341
Query: 235 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI 294
NDFLPH+P+LEIRE AI+ L+ +YKK GYLTD ++ RVE + +G ED I
Sbjct: 342 NDFLPHLPSLEIRENAIDRLVTLYKKCVYKTKGYLTDSGSVTVDRVELIMTDLGYAEDEI 401
Query: 295 FQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQS 354
F++R R ER KR K Q R +P+ + + S+ A P+P
Sbjct: 402 FRQRKVTEDRFKERNKRMKLQKEREQ------RPN----FEQMNKSQFA----PTPL--- 444
Query: 355 ECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRD 414
G+G + + + PR + + ++ +N+ K K E L
Sbjct: 445 --------GRGITPQAIQNPRQEAAHFRMFGNSSNQQQSNSNNDQNRRGQKRKADEPL-- 494
Query: 415 KSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 474
+ A + D+V+L E G+K+RYYE KF+ + + R+ V Y GLCWV+ Y
Sbjct: 495 -TPAAVEEAETPDEVRLWEDGFKDRYYESKFDVAP--QNMKFRQTVAWEYVRGLCWVLKY 551
Query: 475 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEH 534
YY+G SW+W++PYHYAPFASD K L N F+ G PFKP QL+GVFP+AS + +P
Sbjct: 552 YYQGCASWEWYFPYHYAPFASDFKGLSNVNTHFDRGTPFKPLQQLMGVFPAASRNHVPPA 611
Query: 535 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 594
+ +LM DP SPI DFYP DF +D+NGK+++WQG+A LPF+DE RL +LT EE
Sbjct: 612 FAELMVDPKSPIIDFYPIDFHIDLNGKKFAWQGVALLPFVDEKRLFKATDPKVPSLTHEE 671
Query: 595 ARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPC 654
RN + L L P Y L + + EV P L D M G + P
Sbjct: 672 RLRNE---NGLARLYLSP-GPDAYKLVKGLYNGSVDYEREV-----PILVDCMRGIVIPT 722
Query: 655 AGD-PHPPVFRSPVASMEDIMGNQVLCAIYKLP 686
+ H V SP+ + + N+VL + P
Sbjct: 723 KENVTHDGVLPSPIPGLHPVCENKVLTVKFLDP 755
>gi|357615796|gb|EHJ69836.1| hypothetical protein KGM_03375 [Danaus plexippus]
Length = 699
Score = 480 bits (1236), Expect = e-132, Method: Compositional matrix adjust.
Identities = 264/598 (44%), Positives = 357/598 (59%), Gaps = 52/598 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQV-FDSNVITPGTEFMAV 59
MNQQRSRRFRASK+ + E R+R E + +G LPP+ + FDSN ITPGT FM
Sbjct: 111 MNQQRSRRFRASKETQEKIDEIARIRNELQVKGAYLPPERPKEAHFDSNCITPGTPFMDR 170
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
LS L YYIH RLNNDPGW+ +KVILSDANVPGEGEHKIM Y+R QR P +DPNT+H L
Sbjct: 171 LSKCLHYYIHDRLNNDPGWKGVKVILSDANVPGEGEHKIMDYIRRQRAQPDHDPNTQHVL 230
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
G DADLIML LATHE +F+I+RE F P + C +CGQ GH C G +
Sbjct: 231 CGADADLIMLGLATHEPNFTIIRE-EFKPNKPRPCDVCGQLGHEMKECTGTTPDASL--- 286
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
+ D + + F+ + LREYL+ E +PN PF+ D E +DD++FMCFFVGNDFLP
Sbjct: 287 VRSDPSFGNQDSFIFVRLTVLREYLEKELSMPNLPFKYDFERALDDWVFMCFFVGNDFLP 346
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIREGA++ L+ +YKK G++TD +L RV+ + +G ED IF++R
Sbjct: 347 HLPSLEIREGAVDRLVNLYKKCVYKTRGWITDSGDVNLDRVQVIMDELGRVEDEIFRRR- 405
Query: 300 RLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGR 359
HQ REK + ++ + E L + ++F +P + E
Sbjct: 406 --HQNELSFKAREKNKKQQKINFELLEK-------TQF-----------APVKVGEESKT 445
Query: 360 LDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAF 419
++N + A I A ++A E + + K R A
Sbjct: 446 VENAR------------KEAANIRLAGMQAVAEAEKEQRGQK-----------RSAEQAG 482
Query: 420 NSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGV 479
D+ D+V+L E G+KERYYE KF + + E R V L+Y GLCWV+ YYY+G
Sbjct: 483 LDDDDAHDEVRLWEEGFKERYYESKF--EVARDNLEFRYRVALQYVRGLCWVLRYYYQGC 540
Query: 480 CSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKL 538
SW+W++PYHYAPFASD ++ + FE G PF+P QL+GVFP+ASS +P + L
Sbjct: 541 ASWKWYFPYHYAPFASDFVNIQGLSTKFERGTQPFRPLEQLMGVFPAASSQHVPRPWATL 600
Query: 539 MTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 596
M+DP SPI DFYPTDF++D+NGK+++WQG+A LPF+DE RL ++ LT+ E++
Sbjct: 601 MSDPFSPIIDFYPTDFKIDLNGKKFAWQGVALLPFVDETRLFKALEPYYDDLTQAESQ 658
>gi|238881714|gb|EEQ45352.1| 5'-3' exoribonuclease 2 [Candida albicans WO-1]
Length = 968
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 265/635 (41%), Positives = 372/635 (58%), Gaps = 48/635 (7%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKL--PPKSDSQVFDSNVITPGTEFMA 58
MNQQR+RRFRA+KDA A + E QE E G + K Q +DSN ITPGT FM
Sbjct: 106 MNQQRARRFRAAKDAELKAKQLEIEVQERELRGEIINDAIKGKKQ-WDSNAITPGTPFMD 164
Query: 59 VLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHC 118
L+ AL+Y++ +L++DPGW ++VI+SDA VPGEGEHK+M+++R QR+ P YDPNT+HC
Sbjct: 165 RLAEALRYWVAYKLSSDPGWANLQVIISDATVPGEGEHKLMNFIRSQRSDPQYDPNTKHC 224
Query: 119 LYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEF 178
+YGLDADLI L LATHE HF +LRE VF QDK F K + E
Sbjct: 225 IYGLDADLIFLGLATHEPHFRVLREDVF--ASQDKKFTI--------------KDQIAEA 268
Query: 179 DEKGDEVVVP-KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDF 237
+ GD V KKP+ +LH+ LREYL E P F +LE +DD++F+CFF GNDF
Sbjct: 269 NSNGDTVAKEDKKPFLWLHVNVLREYLQVELFTPRMSFPFELERAIDDWVFLCFFAGNDF 328
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
LPH+P+L++R+ I+ L+ +K+ L Y+T K +L+ VE + + E IF+
Sbjct: 329 LPHLPSLDVRDNGIDTLVQCWKRSLPILKDYVTCDGKLNLKSVEVLMSNLAYKESEIFKN 388
Query: 298 RARLHQRHAERIKREK--------------AQARRGDDVEPLAQPDSLVPVSRFHGSRLA 343
+ QR E KR K +Q +G D PL D +P+ G +
Sbjct: 389 KHAAEQRREENNKRRKLAQEQERALKRVYSSQVSKGKDKAPLT-ADVNMPLMDTSGQNVE 447
Query: 344 --SGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENK 401
+ + S Q+ + N S ++ +L +V+ + + ++
Sbjct: 448 GYANLTNSDIVQNRAILTKAN-LANSDAAAELKKLIDSKKTQVTVVQDQIATDSSANSET 506
Query: 402 EEFKAKLKELLRDKSDAFNSDNPEEDK------VKLGEPGWKERYYEEKFNAKTPEEREE 455
+++L+E+ D S + PEEDK +KL EPG+ +RYYE KF+ ++ EE E+
Sbjct: 507 TTSESELEEIQSDNSLKRKLE-PEEDKQTQSDDIKLWEPGYNKRYYEAKFHCQSDEEIEQ 565
Query: 456 TRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQF---NISFELGHP 512
T++DVV Y EG+ WV YYY+G SW W++PYHYAPFA+D +L++ + F+LG P
Sbjct: 566 TKRDVVRHYVEGIAWVALYYYQGCPSWNWYFPYHYAPFAADFTNLEELFPEGVKFKLGEP 625
Query: 513 FKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLP 572
F+PF QL+ V P+AS H LP+ +R LM++P+S I DFYP +FE+DMNGK+ SWQGI LP
Sbjct: 626 FRPFEQLMSVLPAASGHTLPQVFRDLMSNPDSEIIDFYPEEFEIDMNGKKMSWQGIPLLP 685
Query: 573 FIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
FIDE RLLD V+K LT +E RN+ LF+
Sbjct: 686 FIDEKRLLDAVQKKYGLLTPDEKSRNTNKEAELFI 720
>gi|68466241|ref|XP_722895.1| hypothetical protein CaO19.12150 [Candida albicans SC5314]
gi|68466536|ref|XP_722750.1| hypothetical protein CaO19.4681 [Candida albicans SC5314]
gi|74656669|sp|Q5AMG5.3|XRN2_CANAL RecName: Full=5'-3' exoribonuclease 2
gi|46444743|gb|EAL04016.1| hypothetical protein CaO19.4681 [Candida albicans SC5314]
gi|46444898|gb|EAL04170.1| hypothetical protein CaO19.12150 [Candida albicans SC5314]
Length = 968
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 265/635 (41%), Positives = 372/635 (58%), Gaps = 48/635 (7%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKL--PPKSDSQVFDSNVITPGTEFMA 58
MNQQR+RRFRA+KDA A + E QE E G + K Q +DSN ITPGT FM
Sbjct: 106 MNQQRARRFRAAKDAELKAKQLEIEVQERELRGEIINDAIKGKKQ-WDSNAITPGTPFMD 164
Query: 59 VLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHC 118
L+ AL+Y++ +L++DPGW ++VI+SDA VPGEGEHK+MS++R QR+ P YDPNT+HC
Sbjct: 165 RLAEALRYWVAYKLSSDPGWANLQVIISDATVPGEGEHKLMSFIRSQRSDPQYDPNTKHC 224
Query: 119 LYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEF 178
+YGLDADLI L LATHE HF +LRE VF QDK F K + +
Sbjct: 225 IYGLDADLIFLGLATHEPHFRVLREDVF--ASQDKKFTI--------------KDQIADA 268
Query: 179 DEKGDEVVVP-KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDF 237
+ GD V KKP+ +LH+ LREYL E P F +LE +DD++F+CFF GNDF
Sbjct: 269 NSNGDTVAKEDKKPFLWLHVNVLREYLQVELFTPRMSFPFELERAIDDWVFLCFFAGNDF 328
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
LPH+P+L++R+ I+ L+ +K+ L Y+T K +L+ VE + + E IF+
Sbjct: 329 LPHLPSLDVRDNGIDTLVQCWKRSLPILKDYVTCDGKLNLKSVEVLMSNLAYKESEIFKN 388
Query: 298 RARLHQRHAERIKREK--------------AQARRGDDVEPLAQPDSLVPVSRFHGSRLA 343
+ QR E KR K +Q +G D PL D +P+ G +
Sbjct: 389 KHAAEQRREENNKRRKLAQEQERALKRVYSSQVSKGKDKAPLT-ADVNMPLMDTSGQNVE 447
Query: 344 --SGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENK 401
+ + S Q+ + N S ++ +L +V+ + + ++
Sbjct: 448 GYANLTNSDIVQNRAILTKAN-LANSDAAAELKKLIDSKKTQVTVVQDQIATDSSANSET 506
Query: 402 EEFKAKLKELLRDKSDAFNSDNPEEDK------VKLGEPGWKERYYEEKFNAKTPEEREE 455
+++L+E+ D S + PEEDK +KL EPG+ +RYYE KF+ ++ EE E+
Sbjct: 507 TTSESELEEIQSDNSLKRKLE-PEEDKQTQSDDIKLWEPGYNKRYYEAKFHYQSDEEIEQ 565
Query: 456 TRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQF---NISFELGHP 512
T++DVV Y EG+ WV YYY+G SW W++PYHYAPFA+D +L++ + F+LG P
Sbjct: 566 TKRDVVRHYVEGIAWVALYYYQGCPSWNWYFPYHYAPFAADFTNLEELFPEGVKFKLGEP 625
Query: 513 FKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLP 572
F+PF QL+ V P+AS H LP+ +R LM++P+S I DFYP +FE+DMNGK+ SWQGI LP
Sbjct: 626 FRPFEQLMSVLPAASGHTLPQVFRDLMSNPDSEIIDFYPEEFEIDMNGKKMSWQGIPLLP 685
Query: 573 FIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
FIDE RLLD V+K LT +E RN+ LF+
Sbjct: 686 FIDEKRLLDAVQKKYELLTPDEKSRNTNKEAELFI 720
>gi|345487550|ref|XP_001601647.2| PREDICTED: 5'-3' exoribonuclease 2 homolog [Nasonia vitripennis]
Length = 828
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 317/825 (38%), Positives = 438/825 (53%), Gaps = 76/825 (9%)
Query: 24 RLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIK 82
R+R E +G LPP K FDSN ITPGT FMA LS L YYIH RLNNDPGW+ IK
Sbjct: 3 RIRSELALKGAFLPPEKPKEDHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKNIK 62
Query: 83 VILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILR 142
VILSDANVPGEGEHKIM Y+R QR P +DPNT+H L G DADLIML LATHE +F+I+R
Sbjct: 63 VILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHVLCGADADLIMLGLATHEPNFTIIR 122
Query: 143 EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLRE 202
E F P + C +CGQ GH +C G K E G E + F+ + LRE
Sbjct: 123 E-EFKPNKPRPCDICGQLGHDMQDCLGAEPNKKEEEKIFGSEC-----QFIFVRLNVLRE 176
Query: 203 YLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEF 262
YL+ E ++PN PF+ D E +DD++FMCFFVGNDFLPH+P+LEIRE AI+ L+ +YKK
Sbjct: 177 YLERELQMPNLPFKYDFERAIDDWVFMCFFVGNDFLPHLPSLEIRENAIDRLVTLYKKTV 236
Query: 263 RALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARRGDDV 322
GG+LT+ +L RV+ + +G+ ED IF+KR Q REK + RR + +
Sbjct: 237 YKTGGFLTNSGDVNLDRVQLILNDLGNVEDEIFKKR---QQNELAFKAREKNKRRRNEAI 293
Query: 323 EPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGK--GTSGRPHKVPRLSSGA 380
S PV +F + L P + E G+ TS + ++
Sbjct: 294 SNYKP--SWTPVGQFAPNPLGKEVKPVQNARYEAYQMRVQGRNYNTSAVERALQGTNASL 351
Query: 381 TIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERY 440
+ IV S + Q+ K E K D D+V+L E G+K+RY
Sbjct: 352 ALEKMIVPEGESSGSRGQKRKHEEVEK------------EEDEQAHDEVRLWEDGFKDRY 399
Query: 441 YEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDL 500
YE KF+ + R +V L+Y GLCWV+ YYY+G SW+W++PYHYAPFASD ++
Sbjct: 400 YESKFDVLP--DNLAFRNNVALQYVRGLCWVLRYYYQGCASWKWYFPYHYAPFASDFINI 457
Query: 501 DQFNISFELGH-PFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMN 559
+ FE G PF+P QL+GVFP+AS +P + LM D SPI DFYP DF++D+N
Sbjct: 458 GGLSTEFERGTIPFRPLEQLMGVFPAASCKHVPAPWATLMKDSTSPIIDFYPEDFKIDLN 517
Query: 560 GKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYT 619
GK+++WQG+A LPF+DE RL ++ LT E +RN D L+V + +
Sbjct: 518 GKKFAWQGVALLPFVDEERLFKALEPYYGQLTVAEKKRNVRGDDRLYVGPDNSGFTFLKG 577
Query: 620 LDEHCKQLKIKERVEVKERLNPELSDGMNGYI---SPCAGDPHPPVFRSPVASMEDIMGN 676
L E+ ++ + VE+ DGM G + C G+ SP+ ++ + N
Sbjct: 578 LYEN--KIGYDQEVEI-------CIDGMRGTVLLAEDCVGE--GATLPSPINTLP-VRNN 625
Query: 677 QVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKPAPVLWHEDSGRRPHENGRHN--- 733
+++C ++ P + + IFP K ++ + +P VL +D + G +N
Sbjct: 626 RIICVRFRDP-------KYGSDFIFPAKRLKGAE-EPPRVLKPQDFEQMNRGGGGNNQWR 677
Query: 734 PHGTISGRQ----LGEAAHRLVANSLQHMKVDRNGYGDRMHGSPLPYAAAPYVPPVPSYQ 789
P + + LG+A HR++ + HM N +R G +VPP S Q
Sbjct: 678 PQTSFAPSNKVGSLGDAGHRMLGH---HM----NNQNNRQQG------IYGHVPPPASLQ 724
Query: 790 EY--GVYDQGYNRFSQPRTDSYPAGHSQSSISAAQPPYDGGYSQH 832
+ G Y+ GY+ S + DS +QS S P G S H
Sbjct: 725 QSSRGGYNSGYS--SDRQKDSRSHSGNQSGQSRGGPWASGYQSNH 767
>gi|339249025|ref|XP_003373500.1| 5'-3' exoribonuclease 2 [Trichinella spiralis]
gi|316970366|gb|EFV54322.1| 5'-3' exoribonuclease 2 [Trichinella spiralis]
Length = 820
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 305/780 (39%), Positives = 418/780 (53%), Gaps = 100/780 (12%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKS-DSQVFDSNVITPGTEFMAV 59
MNQQR+RRFRASK+AA+ + ++R++ +G LP +S D Q FDSN ITPGT FMA
Sbjct: 111 MNQQRTRRFRASKEAAEKEEQIRQIREDLRAQGIPLPAESTDKQHFDSNCITPGTPFMAR 170
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
L+I L+YYIH RLN DP W+ + VILSDA+VPGEGEHKIM Y+R QR +DPNT H L
Sbjct: 171 LAICLRYYIHERLNTDPAWQNLLVILSDASVPGEGEHKIMDYIRHQRACASHDPNTHHVL 230
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
G DADLIML LATHE +F+I+RE F P C +C GH +C+G + + +
Sbjct: 231 CGADADLIMLGLATHEPNFTIIRE-EFVPNLPRPCEICNNYGHTMQDCQGLSILENE--N 287
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
E+ V+ K + F+ + LREYL E +PN F+ D E VDD++FMCFFVGNDFLP
Sbjct: 288 EEAHRPVLKKTQFIFIRLSVLREYLQRELEMPNIKFKYDFERCVDDWVFMCFFVGNDFLP 347
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIREGAI+ L+ +YK GGYLT+ +L+RV+ + +G ED IF++R
Sbjct: 348 HLPSLEIREGAIDRLVKLYKDCVYRTGGYLTENGFVNLKRVQLIMSELGKVEDEIFRQR- 406
Query: 300 RLHQRHA-------ERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQ 352
+R A + I+ R E P + +P + F + + P P
Sbjct: 407 --QEREAMDNIFLLDWIQFSNKAKMRRMQAENFDAP-AFIPQNAFAPTPIGESPLP---- 459
Query: 353 QSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELL 412
L N K T+ + + +T K EF
Sbjct: 460 -------LSNAKRTAMEMRQAAMAVTSST-------------------KREFNGA----- 488
Query: 413 RDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVM 472
+ DA N + P D+V+L E GWK+RYY KF +P++ E R V Y EGLCWV+
Sbjct: 489 ANAEDA-NDEGP-LDEVRLWECGWKDRYYLVKFQC-SPKDL-EFRHHVANCYVEGLCWVL 544
Query: 473 HYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISF-ELGHPFKPFNQLLGVFPSASSHAL 531
YYY+G CSW+W++P+HY+PFASD ++ I F E P KP QL+ VFP+ASS L
Sbjct: 545 RYYYQGCCSWKWYFPFHYSPFASDFLNIGDLKIDFSEKTMPIKPLEQLMSVFPAASSKHL 604
Query: 532 PEHYRKLMTDP---NSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEH 588
P+ + LM DP S I D YP+DF+VD+NGKRY+WQG+ LPF+D RL + ++ +
Sbjct: 605 PKSWAALMHDPVRDKSTIIDMYPSDFKVDLNGKRYAWQGVVLLPFVDAERLNEALEVVYP 664
Query: 589 TLTEEEARRNSIMADMLFVLLSHP---LSASIYTLDEHCKQLKIKERVEVKERLNPELSD 645
LTEEE RN D+LF+ H SIY D + L ++P L +
Sbjct: 665 DLTEEERFRNKQGNDLLFISSKHEAFDFIQSIYEGDMSAEWLN----------MDPSLCN 714
Query: 646 GMNGYISPCAGDPHPPV---FRSPVASMEDIMGNQVL---CAIYKLPDAHKHVTRPPAGV 699
G++ + P H PV SP+ D+ N VL C + PD + T +G
Sbjct: 715 GISLMVKPYKF--HVPVGKTVHSPLPQCNDVENNHVLSVFCLNPQFPDDYIFSTARLSGA 772
Query: 700 IFPKKIVQLEDLKPAPVL----WHEDSGRRPHENGRHNPHG----TISGRQLGEAAHRLV 751
+ P PVL W +D +GR+ P + QL A+ R++
Sbjct: 773 CCLFR-------DPQPVLKPKDWDDD------RDGRYRPVTGFVQSAVTAQLNRASKRIL 819
>gi|241954112|ref|XP_002419777.1| 5'-3' exoribonuclease, putative [Candida dubliniensis CD36]
gi|223643118|emb|CAX41992.1| 5'-3' exoribonuclease, putative [Candida dubliniensis CD36]
Length = 978
Score = 477 bits (1227), Expect = e-131, Method: Compositional matrix adjust.
Identities = 275/716 (38%), Positives = 396/716 (55%), Gaps = 56/716 (7%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPK-SDSQVFDSNVITPGTEFMAV 59
MNQQR+RRFRA+KDA A + E +E E G + + +DSN ITPGT FM
Sbjct: 106 MNQQRARRFRAAKDAELKAKQLEIEVKERELRGEIINDAIKGKKQWDSNAITPGTPFMDR 165
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
L+ AL+Y++ +L++DPGW ++VI+SDA VPGEGEHK+MS++R QR+ P YDPNT+HC+
Sbjct: 166 LAEALRYWVAYKLSSDPGWANLQVIISDATVPGEGEHKLMSFIRSQRSDPQYDPNTKHCI 225
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
YGLDADLI L LATHE HF +LRE VF QDK F K + E +
Sbjct: 226 YGLDADLIFLGLATHEPHFRVLREDVF--ATQDKKFTI--------------KDQIAEAN 269
Query: 180 EKGDEVVVP--KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDF 237
+VV +KP+ +LH+ LREYL E P F +LE +DD++F+CFF GNDF
Sbjct: 270 SNDGDVVAKDDRKPFLWLHVNVLREYLQVELFTPRMSFPFELERAIDDWVFLCFFAGNDF 329
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
LPH+P+L++R+ I+ L+ +K+ L Y+T K +L+ VE + + E IF+
Sbjct: 330 LPHLPSLDVRDNGIDTLVQCWKRSLPILKDYVTCDGKLNLKSVEVLMSNLAYKESEIFKN 389
Query: 298 RARLHQRHAERIKREK--------------AQARRGDDVEPLAQPDSLVPVSRFHGSRLA 343
+ QR E KR K +Q +G D PL D +P+ G +
Sbjct: 390 KHAAEQRREENNKRRKLAQEQDRALKRIYSSQVSKGKDKAPLT-ADVNMPLMDTSGQIVE 448
Query: 344 --SGPSPSPYQQSECV---GRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQ 398
+ S S Q+ + L N + + + T+ + ++S ++
Sbjct: 449 GYANLSNSDIVQNRAILTKANLANSDAAAELKKLIDSKKTQVTVVQDQIATDSSANSETT 508
Query: 399 ENKEEFKAKLKE-LLRDKSDAFNSDN--PEEDKVKLGEPGWKERYYEEKFNAKTPEEREE 455
++ E + + L+ K ++ DN + D +KL EPG+ +RYYE KF+ ++ EE E+
Sbjct: 509 TSESELEENQSDNSLKRKLESEEKDNKQTQSDDIKLWEPGYNKRYYEAKFHCQSDEEIEQ 568
Query: 456 TRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQF---NISFELGHP 512
T++DVV Y EG+ WV YYY+G SW W++PYHYAPFA+D +L++ + F+LG P
Sbjct: 569 TKRDVVRHYVEGIAWVALYYYQGCPSWNWYFPYHYAPFAADFTNLEELFPEGVKFKLGEP 628
Query: 513 FKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLP 572
F+PF QL+ V P+AS H LP+ +R LM++P+S I DFYP +FE+DMNGK+ SWQGI LP
Sbjct: 629 FRPFEQLMSVLPAASGHTLPQVFRDLMSNPDSEIIDFYPEEFEIDMNGKKMSWQGIPLLP 688
Query: 573 FIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKER 632
FIDE RLLD V+K LT +E RN+ LF+ P + + E + E
Sbjct: 689 FIDEKRLLDAVQKKYELLTPDEISRNTNKEAELFI---SPANKNFSKFSETLYKENANEV 745
Query: 633 VEVKERLNPELSDGMNGYISPCAGDPHPPVFRSPV--ASMEDIMGNQVLCAIYKLP 686
V + G++G I A VF P+ M ++ + AIY P
Sbjct: 746 VFKYAK------SGLSGKIFKLATFNPEGVFNFPLNEGHMPNVNSSDYFQAIYHFP 795
>gi|426391130|ref|XP_004061937.1| PREDICTED: 5'-3' exoribonuclease 2 [Gorilla gorilla gorilla]
Length = 1099
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 294/714 (41%), Positives = 394/714 (55%), Gaps = 97/714 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 304 MNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNL 363
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 364 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 423
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 424 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDE 482
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 483 LADSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPH 542
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIRE AI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 543 LPSLEIRENAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKR-- 600
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRL 360
+ E R + + +R P P+ + S SPSP
Sbjct: 601 ---KDDEDSFRRRQKEKRKRMKSPSISPN----------TSFTSDGSPSP---------- 637
Query: 361 DNGKGTSGRPHKVPRLSSGATIGAAIVEAENS-FETDPQENKEEFKAKLKELLRDKSDAF 419
+G +AE+S E +P++N ++A K+ R + F
Sbjct: 638 ---------------------LGGIKRKAEDSDSEPEPEDNVRLWEAGWKQ--RYYKNKF 674
Query: 420 NSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGV 479
+ D + EKF K + E V+ Y +G
Sbjct: 675 DVDAAD-----------------EKFRRKVVQSYVEGLCWVLRYYYQG-----------C 706
Query: 480 CSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKL 538
SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP +RKL
Sbjct: 707 ASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKL 766
Query: 539 MTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
M+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE RRN
Sbjct: 767 MSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRN 826
Query: 599 SIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDP 658
S+ D+LFV HPL I L Q E V+V PEL G+ G S
Sbjct: 827 SLGGDVLFVGKHHPLHDFILEL----YQTGSTEPVDVP----PELCHGIQGKFSLDEEAI 878
Query: 659 HPP-VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHV--------TRPPAGVIFP 702
P + SPV + D+ N V+ +K P A ++ R PA V+ P
Sbjct: 879 LPDQIVCSPVPMLRDLTQNTVVSINFKDPQFAEDYIFKAVMLPGARKPAAVLKP 932
>gi|294657829|ref|XP_460123.2| DEHA2E18898p [Debaryomyces hansenii CBS767]
gi|218512153|sp|Q6BNU7.4|XRN2_DEBHA RecName: Full=5'-3' exoribonuclease 2
gi|199432980|emb|CAG88393.2| DEHA2E18898p [Debaryomyces hansenii CBS767]
Length = 1003
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 265/661 (40%), Positives = 377/661 (57%), Gaps = 52/661 (7%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPK-SDSQVFDSNVITPGTEFMAV 59
MNQQRSRRFR+++DA + E+ER +E E G + + +DSN ITPGT FM
Sbjct: 107 MNQQRSRRFRSAQDAKIAHEEKERQIRERESRGESIDDAIKGKKSWDSNAITPGTPFMDS 166
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
L+ AL+Y++ +L DPGW ++VI+SDA VPGEGEHK+MS++R QR+ P YDPNT+HC+
Sbjct: 167 LAQALRYWVAYKLATDPGWANLQVIISDATVPGEGEHKLMSFIRSQRSDPEYDPNTKHCI 226
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
YGLDADLI L LATHE HF +LRE VF Q + + Q + A++ A
Sbjct: 227 YGLDADLIFLGLATHEPHFRVLREDVFA-NQSRQMRISDQLSMTQDQKDSIAEQDA---- 281
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
KKP+ +LH+ LREYL+ E P+ F DLE +DD++FMCFFVGNDFLP
Sbjct: 282 ---------KKPFLWLHVNVLREYLEIELYNPHLSFPFDLERAIDDWVFMCFFVGNDFLP 332
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+L++R+ I++L+ +K+ L Y+T +L VE + ++ ED IF+KR
Sbjct: 333 HLPSLDVRDNGIDILVNCWKRMLPKLRDYITCDGNLNLESVEKLLSSLSYKEDEIFRKRH 392
Query: 300 RLHQRHAERIKREKA--------------QARRGDDVEPLAQPDSLVPVSRFHGSRL--- 342
+R E KR K Q +G D PL D +P+ G +
Sbjct: 393 EGEKRREENDKRRKLAQEEEKALKNQYIPQVSKGSDKAPLT-ADINMPLLSTSGDAVEGY 451
Query: 343 ASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLS-------SGATIGAAIVEAENSFET 395
A + + + + + + + K S + AAI E +N +
Sbjct: 452 AQLSNKDIVENRDVITKANMSNADAAAALKKLLDSKNNKESDKNVSASAAIQEQQNKSDI 511
Query: 396 DPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREE 455
+ EN ++ E K D D V++ EPG+++RYY+ KF + EE +
Sbjct: 512 NTTENSKKRPIDQVEAELPKPDE------NGDSVRMWEPGYRQRYYQSKFGVVSEEEINK 565
Query: 456 TRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQF----NISFELGH 511
R+D+V Y EG+ WV+ YYY+G SWQW+YPYHYAPFA+D +++ I F LG
Sbjct: 566 IRRDMVRCYLEGISWVLLYYYQGCPSWQWYYPYHYAPFAADFVNINDIIGEQGIKFTLGE 625
Query: 512 PFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKL 571
PFKP+ QL+ V P+AS H LPE R LM+DP+S I DFYP +F++DMNGK+ SWQGIA L
Sbjct: 626 PFKPYEQLMSVLPAASGHNLPEVLRILMSDPSSEILDFYPEEFQIDMNGKKMSWQGIALL 685
Query: 572 PFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYT--LDEHCKQLKI 629
PFIDE RLL+ ++K H LT++E RN++ ++LF+ + Y D + K+LK
Sbjct: 686 PFIDENRLLEALEKRYHLLTDDERERNTLKNEVLFISNQNKNYKRFYNELYDNNVKELKF 745
Query: 630 K 630
+
Sbjct: 746 R 746
>gi|378727060|gb|EHY53519.1| 5'-3' exoribonculease Dhp1 [Exophiala dermatitidis NIH/UT8656]
Length = 1075
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 278/706 (39%), Positives = 392/706 (55%), Gaps = 67/706 (9%)
Query: 1 MNQQRSRRFRAS---KDAADSAAEEERL--RQEFEREGRKLPPKSDSQVFDSNVITPGTE 55
MNQQR+RRFRA+ K+A + AE + L +Q+ +R+ + + +DSNVITPGT
Sbjct: 111 MNQQRARRFRAARDAKEADEKKAEFQTLLRQQQQDRDDVSDEEEVIKKTWDSNVITPGTP 170
Query: 56 FMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNT 115
FM +L+ +++Y++ +LN DP W ++KVI+SDA+VPGEGEHKIM ++R QR+ P YDPNT
Sbjct: 171 FMFILAQSIRYWVQWKLNTDPAWAELKVIISDASVPGEGEHKIMQFIRSQRSDPEYDPNT 230
Query: 116 RHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKRK 174
RH +YGLDADLIML +ATHE HF +LRE VFT + K C LCGQ GH A NC G AK K
Sbjct: 231 RHVMYGLDADLIMLGIATHEPHFRVLREDVFTRDAKAKTCKLCGQQGHYAENCRGNAKVK 290
Query: 175 AGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVG 234
AGEFDEKG + KP+ +LH+ LREYL E +P PF DLE +DD++FMCFFVG
Sbjct: 291 AGEFDEKGTTEEL--KPFIWLHVPVLREYLAAEMFVPGQPFRFDLERALDDWVFMCFFVG 348
Query: 235 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI 294
NDFLPH+P+L+I E I+ L+A+++ +GGY+T +L R + +Q + ED I
Sbjct: 349 NDFLPHLPSLDIHEDGIDKLIAIWRDNLPLMGGYVTCDGNVNLARAQIILQGLAKQEDAI 408
Query: 295 FQKRARLHQRHAE------------------RIKREKAQARRGDDVEPLAQPDSLVPVSR 336
F++R + R + +R RG V+ A PV
Sbjct: 409 FKRRKEVADRRERNERRREQQQEAREAQRNPKRRRNSPDYNRGGRVDTRA---PTGPVET 465
Query: 337 FHGSRLASGPSPSPYQQSECVGRLDNGKGTSG---------RPHKVPRLSSGATIGAAIV 387
F + + S + L K + R + A
Sbjct: 466 FEATNYPTLDYNSIVNRGAVDKALTTNKSAAAVLKEQMLAQRAAATETPTKTAATNGTAN 525
Query: 388 EAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNP--------------------EED 427
A+ S TD + L+ ++ A +S P + D
Sbjct: 526 GADGSPNTDSNTPGSALGKRKAALMEEQDAASDSGTPGRNTPLTKTDTNEEPPPVDPDLD 585
Query: 428 KVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYP 487
V+L EPG+ +RYYE+KF+ +P + E R V Y EGLCWV+ YY++G SW W+YP
Sbjct: 586 TVRLWEPGYADRYYEQKFHV-SPNDI-EFRHKVARAYVEGLCWVLLYYFQGCPSWTWYYP 643
Query: 488 YHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPIS 547
YHYAPFA+D D+D+ + F+ G PF+P+ QL+GV P++S+HA+P + LMTD +S I
Sbjct: 644 YHYAPFAADFVDIDKMEVKFDKGTPFRPYEQLMGVLPASSNHAIPPAFHPLMTDEDSEIV 703
Query: 548 DFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
DFYP DF++D+NGK+ SW+ + LPFIDE RLL + L+++E RN D L +
Sbjct: 704 DFYPEDFDLDLNGKKQSWKAVVLLPFIDEKRLLKAMGTKYPLLSDDERARNEFGKDALII 763
Query: 608 LLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDG-MNGYIS 652
+PL DE Q K+ + KE + + G + G +S
Sbjct: 764 SDQNPL------YDELALQFYSKKAKDGKETVKLSMRKGRLAGTVS 803
>gi|190345269|gb|EDK37129.2| hypothetical protein PGUG_01227 [Meyerozyma guilliermondii ATCC
6260]
Length = 909
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 256/631 (40%), Positives = 370/631 (58%), Gaps = 47/631 (7%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLP---PKSDSQVFDSNVITPGTEFM 57
MNQQRSRRFR++++A A+EE+ RQ ERE R + +DSN ITPGT FM
Sbjct: 35 MNQQRSRRFRSAQEA--KIADEEKQRQIKERELRGESIDEAIKGKRSWDSNAITPGTPFM 92
Query: 58 AVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRH 117
L+ AL+Y++ +L +DPGW ++VI+SDA VPGEGEHKIM+++R QR+ P YDPNT+H
Sbjct: 93 DKLATALRYWVAYKLTSDPGWANVQVIISDATVPGEGEHKIMNFIRSQRSDPEYDPNTKH 152
Query: 118 CLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGE 177
C+YGLDADLI L LATHE HF +LRE VF Q + + Q + A + A
Sbjct: 153 CIYGLDADLIFLGLATHEPHFRVLREDVFA-NQSRQLRVSDQISMTQEQKDSLAAQDA-- 209
Query: 178 FDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDF 237
+KP+ +LHI LREYL+ E +P+ PF D+E +DD+IFMCFFVGNDF
Sbjct: 210 -----------RKPFLWLHINVLREYLETELFVPHLPFTFDVERAIDDWIFMCFFVGNDF 258
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
LPH+P+L++R+ I++L+ +K+ L GY+T ++ VE + A+ E IF+K
Sbjct: 259 LPHLPSLDVRDNGIDILLGCWKRVVPKLKGYITCDGNLNVESVEKLMNALTYKEAEIFRK 318
Query: 298 RARLHQRHAERIKREK--------------AQARRGDDVEPLAQPDSLVPVSRFHGSRL- 342
R +R E KR K +Q +G D PL D+ +P+ G +
Sbjct: 319 RHEQEKRREENDKRRKVFQEEDRALKNQYLSQVSKGQDKAPLV-ADTQMPLMTTSGEVVE 377
Query: 343 --ASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQEN 400
A + + + + + + K L G ++E + +++ E
Sbjct: 378 GYAKLSNRDIVHHRDVITKANMSNAEAAAELK-KLLDGGMDNSTDQQDSETNVQSNASET 436
Query: 401 KEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDV 460
E+ K R + + D V++ EPG+ +RYY+ KF+ T EE +ETR+ +
Sbjct: 437 SEQPSRK-----RPLESELPTPDENGDAVRMWEPGYHDRYYQTKFHLTTQEEIDETRRGL 491
Query: 461 VLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQF----NISFELGHPFKPF 516
V Y EG+ W + YYY+G SWQW+YPYHYAPFA+D ++ I F+LG PF+P+
Sbjct: 492 VRSYLEGISWALLYYYQGCPSWQWYYPYHYAPFAADFVNVSDIIGEEGIKFDLGTPFRPY 551
Query: 517 NQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDE 576
QL+ V P+AS H LPE +R LM++P+SPI DFYP +FE+DMNGK+ SWQGIA LPFI+E
Sbjct: 552 EQLMAVLPAASGHNLPEVFRDLMSNPDSPIIDFYPEEFEIDMNGKKMSWQGIALLPFIEE 611
Query: 577 ARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
RLL ++ LT++E RN++ +++L +
Sbjct: 612 KRLLSVLESKYPELTDDERDRNTLKSEVLVM 642
>gi|146419185|ref|XP_001485556.1| hypothetical protein PGUG_01227 [Meyerozyma guilliermondii ATCC
6260]
Length = 909
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 264/637 (41%), Positives = 375/637 (58%), Gaps = 59/637 (9%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLP---PKSDSQVFDSNVITPGTEFM 57
MNQQRSRRFR++++A A+EE+ RQ ERE R + +DSN ITPGT FM
Sbjct: 35 MNQQRSRRFRSAQEA--KIADEEKQRQIKERELRGESIDEAIKGKRSWDSNAITPGTPFM 92
Query: 58 AVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRH 117
L+ AL+Y++ +L +DPGW ++VI+SDA VPGEGEHKIM+++RLQR P YDPNT+H
Sbjct: 93 DKLATALRYWVAYKLTSDPGWANVQVIISDATVPGEGEHKIMNFIRLQRLDPEYDPNTKH 152
Query: 118 CLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGE 177
C+YGLDADLI L LATHE HF +LRE VF Q + + Q + A + A
Sbjct: 153 CIYGLDADLIFLGLATHEPHFRVLREDVFA-NQSRQLRVLDQILMTQEQKDSLAAQDA-- 209
Query: 178 FDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDF 237
+KP+ +LHI LREYL+ E +P+ PF D+E +DD+IFMCFFVGNDF
Sbjct: 210 -----------RKPFLWLHINVLREYLETELFVPHLPFTFDVERAIDDWIFMCFFVGNDF 258
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
LPH+P+L++R+ I++L+ +K+ L GY+T ++ VE + A+ E IF+K
Sbjct: 259 LPHLPSLDVRDNGIDILLGCWKRVVPKLKGYITCDGNLNVESVEKLMNALTYKEAEIFRK 318
Query: 298 RARLHQRHAERIKREK--------------AQARRGDDVEPLAQPDSLVPVSRFHGSRLA 343
R +R E KR K +Q +G D PL D+ +P+ G +
Sbjct: 319 RHEQEKRREENDKRRKVFQEEDRALKNQYLSQVSKGQDKAPLV-ADTQMPLMTTSGEVV- 376
Query: 344 SGPSPSPYQQSECVGRLDNGKGTSGRP--HKVPRLSSGATIG-AAIVEAENSFETDPQEN 400
E +L N R K L++ A +++ TD Q++
Sbjct: 377 -----------EGYAKLSNRDIVHHRDVITKANMLNAEAAAELKKLLDGGMDNSTDQQDS 425
Query: 401 KEEFKAKLKELLRDKSDA--FNSD--NPEE--DKVKLGEPGWKERYYEEKFNAKTPEERE 454
+ ++ E L S S+ P+E D V++ EPG+ +RYY+ KF+ T EE +
Sbjct: 426 ETNVQSNASETLEQPSRKRPLESELPTPDENGDAVRMWEPGYHDRYYQTKFHLTTQEEID 485
Query: 455 ETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQF----NISFELG 510
ETR+ +V Y EG+ W + YYY+G SWQW+YPYHYAPFA+D ++ I F+LG
Sbjct: 486 ETRRGLVRSYLEGISWALLYYYQGCPSWQWYYPYHYAPFAADFVNVSDIIGEEGIKFDLG 545
Query: 511 HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAK 570
PF+P+ QL+ V P+AS H LPE +R LM++P+SPI DFYP +FE+DMNGK+ SWQGIA
Sbjct: 546 TPFRPYEQLMAVLPAASGHNLPEVFRDLMSNPDSPIIDFYPEEFEIDMNGKKMSWQGIAL 605
Query: 571 LPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
LPFI+E RLL ++ LT++E RN++ +++L +
Sbjct: 606 LPFIEEKRLLLVLESKYPELTDDERDRNTLKSEVLVM 642
>gi|255941486|ref|XP_002561512.1| Pc16g12130 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586135|emb|CAP93883.1| Pc16g12130 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1015
Score = 471 bits (1212), Expect = e-129, Method: Compositional matrix adjust.
Identities = 295/788 (37%), Positives = 423/788 (53%), Gaps = 103/788 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERL-----RQEFEREGRKLPPKSDSQ-VFDSNVITPGT 54
MNQQR+RRFR++++A ++ ++E L +Q + G +L + Q +DSNVITPGT
Sbjct: 111 MNQQRARRFRSAQEAKENDQKKEELHKMLAQQHATKTGEQLIREEVVQKTWDSNVITPGT 170
Query: 55 EFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPN 114
FM +L+ +L+Y+I +LN DPGWE +K+I+SDA VPGEGEHKIM++
Sbjct: 171 PFMDILAASLRYWIAYKLNTDPGWENLKIIISDATVPGEGEHKIMNF------------- 217
Query: 115 TRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKR 173
DADLIML L THE +F +LRE VF + + C LCGQ GH A C G+ K
Sbjct: 218 --------DADLIMLGLGTHEPYFRVLREDVFAQDSRPRGCRLCGQNGHKAEECLGRPKE 269
Query: 174 KAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFV 233
K+GEFDEK + P KP+ +LH+ LREYL E R+P PF DLE +DD++FMCFFV
Sbjct: 270 KSGEFDEK--QHAAPLKPFIWLHVAVLREYLAVELRVPQQPFPFDLERALDDWVFMCFFV 327
Query: 234 GNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDR 293
GNDFLPH+P+L+IRE I+ L+A+++ A+G YLT L+ + +Q + ED
Sbjct: 328 GNDFLPHLPSLDIRENGIDTLIAIWRDSLPAMGSYLTKDGSVELKNAQIILQGLAKQEDA 387
Query: 294 IFQKRARLHQRHAERIKR----------EKAQAR---------------RGDDVEPLAQP 328
IF +R + +R KR E+AQ R RG EP+ P
Sbjct: 388 IFARRRQADERKQANEKRRKEQDAARNEERAQKRRRSSPQYDLTAGDRSRGGGGEPVP-P 446
Query: 329 DSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAA--- 385
L+ R H ++ + S V R N + S +L G GA
Sbjct: 447 MELITPGRGHLNKETRELTHSMVINRGAVYRA-NMENKSAAAVLKSKLMKGKQDGAGDSE 505
Query: 386 -------IVEAENSFETDP----QENKEEFKAKLKEL---LRDK-------SDAFNSDNP 424
V +E +T P + +E + + E+ RD ++ D P
Sbjct: 506 TPATDGEDVSSETPEQTSPGVLGKRKADEAEQDVTEIGTPGRDSPLPATVAAEKPKQDEP 565
Query: 425 EEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQW 484
+ED VKL EPG+ +RYYE+KF + E R V Y GLCWV+ YY++G SW W
Sbjct: 566 QEDTVKLWEPGYADRYYEQKFGVDPKD--LEFRHQVAREYAIGLCWVLRYYFQGCPSWTW 623
Query: 485 FYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNS 544
+YP HYAPFA+D D+ ++ FE G FKPF QL+GV P++S+HALP+ + LM P+S
Sbjct: 624 YYPRHYAPFAADFVDIADMDVKFEKGTIFKPFEQLMGVLPASSNHALPKVFHPLMESPDS 683
Query: 545 PISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADM 604
I DFYP DF +D+NGK+++WQG+ LPFIDE RLL+ + K+ LTE+E RN+ ++
Sbjct: 684 EIIDFYPEDFPLDLNGKKFAWQGVILLPFIDETRLLNAMAKVYPLLTEDEKSRNTHGQEV 743
Query: 605 LFVLLSHP----LSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAG-DPH 659
L + +P L A+ Y+ Q +KE V S G+ G + PH
Sbjct: 744 LLLSDRNPLYQDLVANFYSKKPGPAQYPLKEDV----------SGGLAGIVERSETYIPH 793
Query: 660 PPVFRSPVAS--MEDIMGNQVLCAIYKLP-DAHKHVTRPPAGVIFPKKIVQLEDLKPAPV 716
+ SP+ + M + ++ L +Y +P +H H + GV P ++ D++ A
Sbjct: 794 SSLV-SPLEAHGMPGVDDDRSLTVMYTIPKSSHVHKSMLLRGVKLPTPMLDSNDIR-ATQ 851
Query: 717 LWHEDSGR 724
++SGR
Sbjct: 852 TRSQNSGR 859
>gi|19115067|ref|NP_594155.1| 5'-3' exoribonuclease Dhp1 [Schizosaccharomyces pombe 972h-]
gi|729332|sp|P40848.1|XRN2_SCHPO RecName: Full=5'-3' exoribonuclease 2; AltName: Full=Protein dhp1
gi|496393|dbj|BAA04601.1| Dhp1 protein [Schizosaccharomyces pombe]
gi|1177359|emb|CAA93235.1| 5'-3' exoribonuclease Dhp1 [Schizosaccharomyces pombe]
Length = 991
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 295/780 (37%), Positives = 423/780 (54%), Gaps = 93/780 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPK-SDSQVFDSNVITPGTEFMAV 59
MNQQRSRRFR+S++AA E + +E +++G + + + +DSN ITPGT FM
Sbjct: 112 MNQQRSRRFRSSREAALKEEELQAFIEEAKQQGIPIDENATKKKSWDSNCITPGTPFMDT 171
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
L+ +L+YYI +LN+DP W ++ ILSDA+VPGEGEHKIM ++R QR P YDPNT H +
Sbjct: 172 LAKSLRYYIINKLNSDPCWRNVRFILSDASVPGEGEHKIMEFIRSQRVKPEYDPNTHHVV 231
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
YGLDADLIML LATHE HF +LRE VF Q G E + K D
Sbjct: 232 YGLDADLIMLGLATHEPHFRVLREDVFF-----------QQGSTKKTKEERLGIK--RLD 278
Query: 180 EKGDEVVVP-KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFL 238
+ + VP KKP+ +L++ LREYL+ E +PN PF DLE +DD++F FFVGNDFL
Sbjct: 279 DVSETNKVPVKKPFIWLNVSILREYLEVELYVPNLPFPFDLERAIDDWVFFIFFVGNDFL 338
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 298
PH+P+L+IR+GA+ L +++ +GGYLT +L R E + AVG+ ED IF++
Sbjct: 339 PHLPSLDIRDGAVERLTEIWRASLPHMGGYLTLDGSVNLARAEVILSAVGNQEDDIFKRL 398
Query: 299 AR----------------------------LHQRHAERIKREKAQARRGDDVEP-----L 325
+ + QR E E + + V+
Sbjct: 399 KQQEDRRNENYRRRQQRESNQESESYVDNVVIQRSVETQSTEVVTSSKSTSVDTKPPKKT 458
Query: 326 AQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLS--SGATIG 383
+ D+ PV + S S S + R N G S V ++ + + +
Sbjct: 459 QKIDAPAPVDLVNLSEKTSNRSLGATNRELINNRAANRLGLSREAAAVSSVNKLAASALK 518
Query: 384 AAIVEAE--------------NSFE-TDPQENKEEFKAKLKELLRD-----KSDAFNSDN 423
A +V E +++E TD E+ + + + K+ +N
Sbjct: 519 AQLVSNETLQNVPLEDSIASSSAYEDTDSIESSTPVVHPIDTKVSNVGQKRKAPDSTEEN 578
Query: 424 PEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQ 483
D V+L EPG++ERYYE+KF+ +P+E E+ R + V Y GLCWV+ YYY+G SW
Sbjct: 579 ENTDTVRLYEPGYRERYYEQKFHI-SPDEPEKIR-EAVKHYVHGLCWVLLYYYQGCPSWT 636
Query: 484 WFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPN 543
W+YPYHYAPFA+D KDL ++ FEL PFKP+ QLLGV P+AS + LPE + LMTD N
Sbjct: 637 WYYPYHYAPFAADFKDLASIDVKFELNQPFKPYEQLLGVLPAASKNNLPEKLQTLMTDEN 696
Query: 544 SPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMAD 603
S I DFYP +F +D+NGK++ WQG+A LPFIDE RLL+ V KI LTEEE++RN +
Sbjct: 697 SEIIDFYPENFTIDLNGKKFEWQGVALLPFIDENRLLNAVSKIYPQLTEEESKRNEDGST 756
Query: 604 MLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISP---------- 653
+LF+ HP+ E KQL K+R +L+ +++ G+ G ++
Sbjct: 757 LLFISEHHPM------FSELVKQLYSKKRQGKPLKLSGKMAHGLFGKVNTNDSVIPNVSV 810
Query: 654 -CAGDPHPPVFRSPVASMEDIMGNQVLCAIYKLPDAH-KHVTRPPAGVIFPKKIVQLEDL 711
C D S++D NQ + ++++P +H H + GV P +++ ED+
Sbjct: 811 QCPIDVTSADALQKYGSIDD---NQSISLVFEVPKSHFVHKSMLLRGVKMPNRVLTPEDI 867
>gi|354547470|emb|CCE44204.1| hypothetical protein CPAR2_400060 [Candida parapsilosis]
Length = 966
Score = 467 bits (1201), Expect = e-128, Method: Compositional matrix adjust.
Identities = 259/630 (41%), Positives = 367/630 (58%), Gaps = 39/630 (6%)
Query: 1 MNQQRSRRFRASKDAA-DSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAV 59
MNQQR+RRFR+++DA A ++ +R++ R + +DSN ITPGT FM
Sbjct: 106 MNQQRARRFRSAQDAKFKQMAIDKEIREKEARGEMINDAIKGKKQWDSNAITPGTPFMDR 165
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
L+ AL+Y++ +L+ DPGW ++VI+SDA VPGEGEHK+MS++R QR+ P Y+PNT+HC+
Sbjct: 166 LAEALRYWVAYKLSTDPGWANLQVIISDATVPGEGEHKLMSFIRSQRSDPQYNPNTKHCI 225
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
YGLDADLI L LATHE HF +LRE VF Q+ ++ G +K + +
Sbjct: 226 YGLDADLIFLGLATHEPHFRVLREDVFANQQRHMT---------VSDHVGMSKDQLSLIE 276
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
E+ KKP+ +LH+ LREYL E P F DLE +DD++F+CFF GNDFLP
Sbjct: 277 ERDK-----KKPFLWLHVNVLREYLAIELYNPQISFPFDLERAIDDWVFICFFAGNDFLP 331
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+L++R+ I+ L+ +KK L YLT K +L+ VE + + ED IF+ R
Sbjct: 332 HLPSLDVRDNGIDTLVGCWKKCLPRLRDYLTCDGKLNLQSVEVLLGDLAIKEDEIFRNRF 391
Query: 300 RLHQRHAERIKREK--------------AQARRGDDVEPLAQPDSLVPVSRFHGSRL--- 342
+ +R + KR K +Q +G D P+ PD +P+ G+ +
Sbjct: 392 AMEKRREDNRKRRKVAEEQDKALKSVYMSQVTKGKDKAPVV-PDKNLPLMDTSGNVVEGH 450
Query: 343 ASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQEN-- 400
A + Q + + + K S +E+E+S + P N
Sbjct: 451 AQLSNKDIVQNRDTIALAGMANNDAAAALKKLIDSKKQLNEITPIESESSAVSTPASNGG 510
Query: 401 KEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDV 460
+ + + + + D D P +D ++L EPG+++RYY+ KF+ KT EE E+ R++V
Sbjct: 511 TDSEEPQQVNFKKRQVDVDIYDEPVDD-IRLHEPGYQKRYYQVKFHCKTDEEVEQVRRNV 569
Query: 461 VLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQF---NISFELGHPFKPFN 517
V Y EG+ WV YYY+G SW WFYPYHYAPFASD+ +LD+ I F+LG PF+P+
Sbjct: 570 VKSYIEGISWVALYYYQGCPSWTWFYPYHYAPFASDMTNLDELFPDGIKFDLGEPFRPYE 629
Query: 518 QLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEA 577
QL+ V P+ASSHALPE + LM DP+S I +FYP +FE+DMNGK+ SWQGI LPFIDE
Sbjct: 630 QLMSVLPAASSHALPEVFHALMKDPDSEIIEFYPEEFEIDMNGKKMSWQGIPLLPFIDEK 689
Query: 578 RLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
RLLD V+ LTE E RN+ LF+
Sbjct: 690 RLLDAVQGKYEELTEYEKERNTNKQAELFI 719
>gi|302418923|ref|XP_003007292.1| 5'-3' exoribonuclease [Verticillium albo-atrum VaMs.102]
gi|261352943|gb|EEY15371.1| 5'-3' exoribonuclease [Verticillium albo-atrum VaMs.102]
Length = 894
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 257/614 (41%), Positives = 354/614 (57%), Gaps = 63/614 (10%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFERE-GRKLPPKS----DSQVFDSNVITPGTE 55
MNQQRSRRFR++++A + +++ L + +++ G LPP++ + + FDSN ITPGT
Sbjct: 112 MNQQRSRRFRSAQEAQEKEVDKQELLKLLKQQNGGILPPETLESMNKKAFDSNSITPGTP 171
Query: 56 FMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNT 115
FM L+ +L+Y+ +LN DP W ++K+I+SDA VPGEGEHKIM+YVR QR P YDPNT
Sbjct: 172 FMDTLATSLRYWCAYKLNTDPAWARLKIIISDATVPGEGEHKIMNYVRSQRGSPDYDPNT 231
Query: 116 RHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKRK 174
RH +YGLDADLIML LATHE HF +LRE VF + K C +CGQ GH A C+G+AK K
Sbjct: 232 RHVIYGLDADLIMLGLATHEPHFRVLREDVFAQDAKAKMCKICGQKGHDARVCKGEAKDK 291
Query: 175 AGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVG 234
GE+DE+ V + KP+ +LH+ REYL E +P+ PF DLE +DD++FMC FVG
Sbjct: 292 DGEYDEQDKAVAL--KPFIWLHVSIFREYLAIELDVPDLPFRFDLERAIDDWVFMCCFVG 349
Query: 235 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI 294
NDFLPH+P LEIRE I+ L ++K+ +GGY+T L+RV+ + + ED I
Sbjct: 350 NDFLPHLPALEIRENGIDALTTIWKENLPHMGGYVTKDGHIDLKRVQLIMDGLAKQEDAI 409
Query: 295 FQKRARLHQRHAERIKREKAQ------------ARRGDDVEPLAQPDS---LVPVSRFHG 339
F++R R KR K Q + RG P+ S L PVS F
Sbjct: 410 FKRRKEQEDRREANAKRRKLQDERSGRGGRADASGRGRGKPPMDNASSGLALFPVSGFPN 469
Query: 340 SRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRL-------SSGATIGAAIVEAENS 392
+ PS VGR N + +K +SGA +A +A
Sbjct: 470 A------DPSAVTHDMVVGRSSNANINANAANKSAANVIRDRIQASGAQGKSANGDATTH 523
Query: 393 FETDPQENKEEFKAKLKELLRDKSDAFN-------------SDNPEEDKVKLGEPGWKER 439
+ + EE A +++ K+D + ++ D V++ E G+ +R
Sbjct: 524 PKVEVPAVAEEGAAAASSVVKRKADVLDGPSQLTPNTGPSAAEEAAIDHVRMWEEGYADR 583
Query: 440 YYEEKFNAKTPEEREETRKDVVLR------YTEGLCWVMHYYYEGVCSWQWFYPYHYAPF 493
YYE+KF+ R D+ R Y EGLCWV+ YYY+G SW W+YPYHYAPF
Sbjct: 584 YYEQKFHVD--------RNDIAFRHKVAQAYVEGLCWVLLYYYQGCPSWDWYYPYHYAPF 635
Query: 494 ASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTD 553
A+D DLD+ ISFE G KPF QL+ V P+AS ALPE + LM + +S + DFYP +
Sbjct: 636 AADFADLDKIEISFEKGRISKPFEQLMSVMPAASRRALPEVFHDLMLNEDSEVIDFYPQE 695
Query: 554 FEVDMNGKRYSWQG 567
FE+D+NGK+++WQ
Sbjct: 696 FEIDLNGKKFAWQA 709
>gi|149236630|ref|XP_001524192.1| 5'-3' exoribonuclease 2 [Lodderomyces elongisporus NRRL YB-4239]
gi|146451727|gb|EDK45983.1| 5'-3' exoribonuclease 2 [Lodderomyces elongisporus NRRL YB-4239]
Length = 1049
Score = 464 bits (1194), Expect = e-127, Method: Compositional matrix adjust.
Identities = 291/762 (38%), Positives = 411/762 (53%), Gaps = 87/762 (11%)
Query: 1 MNQQRSRRFRASKDAA--DSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMA 58
MNQQR+RRFR+++DA D A +E +EF E K +++DSN ITPGT FM
Sbjct: 106 MNQQRARRFRSAQDAKIKDEAIAKEIADKEFRGELIDNAVKV-KKLWDSNAITPGTPFMD 164
Query: 59 VLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHC 118
L+ AL+Y + +L NDPGW ++VI+SDA VPGEGEHK+MS++R QR+ P YDPNT+HC
Sbjct: 165 RLAEALRYLVAYKLANDPGWANLQVIISDATVPGEGEHKLMSFIRSQRSDPQYDPNTKHC 224
Query: 119 LYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEF 178
+YGLDADLI L LATHE HF +LRE VF Q+K H+A N K +A
Sbjct: 225 IYGLDADLIFLGLATHEPHFRVLREDVF--ANQEKRMTISD--HVAMN-----KDQADLI 275
Query: 179 DEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFL 238
+E+ KKP+ +LH+ LREYL E PN F DLE +DD++F+CFF GNDFL
Sbjct: 276 EERDR-----KKPFLWLHVNVLREYLAVELHNPNMSFPFDLERAIDDWVFICFFAGNDFL 330
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 298
PH+P+L++R+ I+ L+ +K+ L Y+T K +L VE + + ED IF+ R
Sbjct: 331 PHLPSLDVRDNGIDTLVNCWKRCVPRLRDYVTSDGKLNLDSVEVLMADLAIKEDEIFRNR 390
Query: 299 ARLHQRHAERIKREK--------------AQARRGDDVEPLAQ-------------PDSL 331
R+ QR E KR K +Q +G + P+ D
Sbjct: 391 FRIEQRKEEGRKRRKLAEEQDKALKSVYLSQVSKGKEKAPMEANVNMPLMDTSGNVVDGF 450
Query: 332 VPVSR---FHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAA--- 385
P+S H + + + + +L + K S + +GA +GA+
Sbjct: 451 APLSNKDIVHNRDAITLAGMANQDAAAALKKLIDSKKKSMIEQERSSGVAGA-LGASGDS 509
Query: 386 ------IVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKER 439
V ++ TD ++ + K + +D+S +ED+++L EPG+++R
Sbjct: 510 PSESSEAVATPSAANTDLEDTINGKETKKRSYQQDESIE------DEDRLRLHEPGYQKR 563
Query: 440 YYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKD 499
YYE KF+ + EE EETR++VV Y EG+ WV YYY+G SW WFYPYHYAPFA+D+ +
Sbjct: 564 YYEVKFHCTSDEEIEETRRNVVRSYIEGISWVALYYYQGCPSWTWFYPYHYAPFAADMTN 623
Query: 500 L-DQF--NISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEV 556
L D F + FELG PF+P+ QL+ V P+AS HALP+ + LMTDP S + DFYP DFE+
Sbjct: 624 LRDLFPEGVKFELGKPFRPYEQLMSVLPAASKHALPDAFHGLMTDPKSEVIDFYPEDFEI 683
Query: 557 DMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSAS 616
DMNGK+ SWQGI LPFI+E RLL V+ L+E E RN A
Sbjct: 684 DMNGKKMSWQGIPLLPFIEEERLLKAVQAKYSELSEYELSRNV------------NKEAE 731
Query: 617 IYTLDEHCKQLKIKERVEVKERLNPELS-----DGMNGYISPCAGDPHPPVFRSPV--AS 669
++ +++ KE E ++ N E+S G++G + G R P+
Sbjct: 732 LFISNQNKNYALFKE--EFYDKQNTEVSFEFARSGLSGVVIKFRGFQPNGYLRFPLDQGE 789
Query: 670 MEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDL 711
M D+ + L A Y P K + G I P + + D+
Sbjct: 790 MPDVDKREYLQAEYHFPAKRKGKSMLLNGFIAPTPALTVNDV 831
>gi|449519150|ref|XP_004166598.1| PREDICTED: 5'-3' exoribonuclease 3-like [Cucumis sativus]
Length = 590
Score = 463 bits (1192), Expect = e-127, Method: Compositional matrix adjust.
Identities = 272/472 (57%), Positives = 309/472 (65%), Gaps = 33/472 (6%)
Query: 483 QWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDP 542
Q FYPYHYAPFASDLK L + NISF LG PFKPFNQLLGVFP+AS+HALPE YRKLMTD
Sbjct: 95 QRFYPYHYAPFASDLKGLGELNISFNLGTPFKPFNQLLGVFPAASAHALPEQYRKLMTDQ 154
Query: 543 NSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMA 602
NSPI DFYPTDFEVDMNGKRYSWQGIAKLPFIDE RLL EV K+EHTLTEEEARRNSIM
Sbjct: 155 NSPIIDFYPTDFEVDMNGKRYSWQGIAKLPFIDETRLLAEVAKVEHTLTEEEARRNSIMF 214
Query: 603 DMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPV 662
DMLFV SHPLS SIY+LD CKQL ++R EVKE++NPE S+GMNGY+SPC G+ PP+
Sbjct: 215 DMLFVTSSHPLSVSIYSLDNRCKQLAERDRTEVKEKINPEHSEGMNGYLSPCLGELCPPI 274
Query: 663 FRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKPAPVLWHEDS 722
FRSPV +EDI+ NQV+CAIY+LPD HKH+T+PPAGV FP KIV L D+KP PVLWHEDS
Sbjct: 275 FRSPVEGLEDIIDNQVICAIYRLPDVHKHITQPPAGVNFPPKIVSLGDMKPEPVLWHEDS 334
Query: 723 GRRPH---------ENGRHNPHGTISGRQLGEAAHRLVANSLQHMKVDRNGYGDRMHGSP 773
GRR H ENGR NP G ISGRQLG+AAHRLV NSLQ DR G+ + P
Sbjct: 335 GRRHHHHQDNGRYNENGRPNPPGAISGRQLGDAAHRLVVNSLQVRGGDRTGHNN-WQAPP 393
Query: 774 LPYAAAPYV---PPVPSYQEYGVYDQGYN-RFSQPRTDSYPAGHSQSSISAAQPPYDGGY 829
L + A PY+ PP S+++Y DQ + R +Y GH + A+ D GY
Sbjct: 394 LSHTAQPYIPGQPPSHSHRDYRSRDQAVDYRMPPGGRPNYSQGHHNT----ARGHQDHGY 449
Query: 830 SQ----HYASNTSHHP---NRRYHPQYDRNSSGEHPTHLYNPSG-IHQNGGPRYPP-RPM 880
Q H+ + HH N R H Q E+P Y S G PP
Sbjct: 450 HQPPAGHHHRDMRHHSQHYNNRAHNQVSSQHYNENPEAYYPSSASASWQGHSDVPPYHHN 509
Query: 881 GSTSSGANLYPPQGGYSGYQSPAA-GSFNQW---GGANQSMPRGYGQGQHHQ 928
G TS Y Q GY+ Q PA GS Q GGA Q+ P HHQ
Sbjct: 510 GPTSHHPPTY--QSGYNYNQLPAGPGSSQQQQHHGGAWQAPPPANHGAPHHQ 559
>gi|195577157|ref|XP_002078439.1| GD23438 [Drosophila simulans]
gi|194190448|gb|EDX04024.1| GD23438 [Drosophila simulans]
Length = 842
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 294/755 (38%), Positives = 398/755 (52%), Gaps = 86/755 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAV 59
MNQQRSRRFRA+K+ + E R+R+E G KLPP K FDSN ITPGT FM
Sbjct: 57 MNQQRSRRFRAAKETTEKRLEVARIREELLSRGCKLPPEKEKGDHFDSNCITPGTPFMDR 116
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
LS L Y++H RLNN+P W+ IKVILSDANVPGEGEHKIM Y+R QR P +DPNT+H L
Sbjct: 117 LSKCLHYFVHDRLNNNPAWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHVL 176
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
G DADLIML LATHE +F+I+RE F P + C +C GH C G +
Sbjct: 177 CGADADLIMLGLATHEPNFTIIREE-FLPNKPRPCDICNGFGHEMDKCVGLGATAPTSAN 235
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
K D + + + F+ + LREYL +PN PFE E +DD++FMCFFVGNDFLP
Sbjct: 236 FKPDVPIGAEVKFIFVRLSVLREYLKQTLEMPNLPFEYSFERALDDWVFMCFFVGNDFLP 295
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIREGA++ L+ +YKK GYLTD +L RV+ + +G+ ED+IF+ R
Sbjct: 296 HLPSLEIREGAVDRLVELYKKCVYKTKGYLTDSGDVNLDRVQLIMTDLGNAEDQIFKSRQ 355
Query: 300 RLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGR 359
R ++ R + + + R D L Q S F S A GP+ Q + VG
Sbjct: 356 RREEQFKAR-DKARKRQERNQDHGSLNQ-------SAFGAS--AVGPN----SQQKSVG- 400
Query: 360 LDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAF 419
N K + R S A + E N
Sbjct: 401 --NYKEEAAALRNRKRTSDMANLDDEDEEENND--------------------------- 431
Query: 420 NSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGV 479
+V+L E G+K+RYYE KF+ + + R V L+Y GLCWV+ YYY+G
Sbjct: 432 --------EVRLWEDGFKDRYYESKFDVAPGNQ--QFRYAVALQYVRGLCWVLKYYYQGC 481
Query: 480 CSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKL 538
SW W++PYHYAPFASD ++ + FE G PF P QL+GVFP+ASS +PE + KL
Sbjct: 482 ASWNWYFPYHYAPFASDFVNIQGLSTMFEKGTKPFNPLEQLMGVFPAASSSHVPEPWAKL 541
Query: 539 MTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
M+DP SPI DFYP DF++D+NG+ +A LPF+DE RL + LT EE +RN
Sbjct: 542 MSDPESPIIDFYPEDFKIDLNGR------MALLPFVDEKRLFKALVPYYDQLTGEEVKRN 595
Query: 599 SIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI-SPCAGD 657
+ L++ P H K++K + + DGM G + S
Sbjct: 596 KRGDNYLYISNQSP----------HYKKVKKVSEKDDESVCKAISFDGMRGTLGSTELNT 645
Query: 658 PHPPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLED-LKPAPV 716
+ +SP++ + DI N + +K P+ IF K +LE+ + P V
Sbjct: 646 AISGILKSPISGLSDINDNITVTTTFKDPEYDDD-------YIFEAK--RLENAVDPPQV 696
Query: 717 LWHEDSGRRPHENGRHNPHGTISGRQLGEAAHRLV 751
L +E SG + N H T + + ++ HR++
Sbjct: 697 LPNEQSGNKHRPVIGFNSHLTRA--YVPDSGHRML 729
>gi|255720663|ref|XP_002545266.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240135755|gb|EER35308.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 981
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 263/639 (41%), Positives = 369/639 (57%), Gaps = 51/639 (7%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPK-SDSQVFDSNVITPGTEFMAV 59
MNQQR+RRFRA++DA + + E +E E G + + +DSN ITPGT FM
Sbjct: 106 MNQQRARRFRAAQDAKLKSHQLEIEVKEREMRGEVIDDAIKGKKQWDSNAITPGTPFMDR 165
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
L+ AL+Y++ +L NDPGW ++VI+SDA VPGEGEHK+M+++R QR+ P YDPNT+HC+
Sbjct: 166 LAEALRYWVAYKLANDPGWANLQVIISDATVPGEGEHKLMNFIRSQRSDPQYDPNTKHCI 225
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
YGLDADLI L LATHE HF +LRE VF +Q+K F +A K K +
Sbjct: 226 YGLDADLIFLGLATHEPHFRVLREDVF--AKQEKKFTIRD--QIAEATSDAVKTKTED-- 279
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
+KP+ +LH+ LREYL E P PF LE +DD++F+CFF GNDFLP
Sbjct: 280 ---------RKPFLWLHVSVLREYLQVELYAPRMPFPFQLERAIDDWVFLCFFAGNDFLP 330
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+L++R+ I+ L+ +K+ L Y+T K +L VE + + + ED IFQ+R
Sbjct: 331 HLPSLDVRDNGIDTLVQCWKRSLGRLKDYVTCDGKLNLESVEVLMSNLATKEDEIFQRRR 390
Query: 300 RLHQRHAERIKREKA--------------QARRGDDVEPLAQPDSLVPVSRFHGSRLA-- 343
QR + IKR K +G D PL D+ +P+ G+ +
Sbjct: 391 AQEQRREDAIKRRKKAIDQEKALKDIYLPTVSKGKDKAPLTA-DTNMPLMDTKGNIVEGY 449
Query: 344 SGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDP------ 397
+ + S Q++ + N + + S T + + + +S + P
Sbjct: 450 ANLTNSDIVQNQAIITKANMANSEAAAQLKKLIDSKKTQVSTVQDQIDSEQMTPSDSSSM 509
Query: 398 --QENKEEFKAKLKELLRDKSDAFNSDNPEE----DKVKLGEPGWKERYYEEKFNAKTPE 451
E++ E + E D + D EE D +KL EPG+ +RYYE KF+ K+ E
Sbjct: 510 PTSESEIETPTTVDE---DSKKRKHKDVDEEIGTPDDIKLYEPGYHKRYYEIKFHCKSDE 566
Query: 452 EREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQF---NISFE 508
E E+ R++VV Y EG+ WV YYY+G SW+W++PYHYAPFA+D +L + I FE
Sbjct: 567 EIEKMRREVVAHYVEGIAWVALYYYQGCPSWKWYFPYHYAPFAADFTNLQELFPNGIKFE 626
Query: 509 LGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGI 568
LG PF+PF QL+ V P+AS HALP+ +R+LM++P+S I DFYP +FE+DMNG + SWQGI
Sbjct: 627 LGQPFRPFEQLMSVLPAASGHALPKVFRELMSNPDSEIIDFYPEEFEIDMNGAKMSWQGI 686
Query: 569 AKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
LPFIDE RLLD V+K LT EE RN+ LF+
Sbjct: 687 PLLPFIDEKRLLDAVQKQYELLTPEEKDRNTNKKAELFI 725
>gi|385303464|gb|EIF47537.1| 5 -3 exoribonuclease 2 [Dekkera bruxellensis AWRI1499]
Length = 1025
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 250/642 (38%), Positives = 369/642 (57%), Gaps = 60/642 (9%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPK-SDSQVFDSNVITPGTEFMAV 59
MNQQRSRRFR+++DA S E ER +E E G + + +DSN ITPGT FM +
Sbjct: 110 MNQQRSRRFRSARDAEISNEERERKMEEMEGRGEVIDESIRHKKTWDSNAITPGTPFMDI 169
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
L+ +L++++ +L NDPGW K++VI+SD++VPGEGEHKIM+++R QR+ P Y+PNT HC+
Sbjct: 170 LAESLRFWVAYKLANDPGWSKLQVIISDSSVPGEGEHKIMNFIRSQRSDPEYNPNTTHCI 229
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
YGLDADLI L+LATHE HF +LRE V+ Q +RK D
Sbjct: 230 YGLDADLIFLSLATHEPHFRVLREDVYAKDQ--------------------LQRKLRNMD 269
Query: 180 EKGD--------EVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCF 231
+ G E++ KKP+ +LHI LREYL E IP F+ DLE +DD++FMCF
Sbjct: 270 QFGIDQQTRNQIELIDKKKPFIWLHIGILREYLAVELSIPRLSFKFDLERAIDDWVFMCF 329
Query: 232 FVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYE 291
F GNDFLPH+P L++R+ +I+ L++++K+ L GY+T + L VE ++ +G E
Sbjct: 330 FCGNDFLPHLPCLDVRDSSIDTLVSIWKRIMPRLKGYITCDGQLDLAGVEALLEELGRME 389
Query: 292 DRIFQKRARLHQRHAERIKREKAQ--------------ARRGDDVEPLAQPDSLVPVSRF 337
D I K+ +R + KR K + +G D P+ P + ++
Sbjct: 390 DTILYKKHEKDRRREDNYKRRKIEKDQRSLIKNELLKTVSKGKDNAPI-MPSQNMTLTNL 448
Query: 338 HGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDP 397
+ +++ G S + + + + K S L I A + ++ ET
Sbjct: 449 NTGKMSGGLKMSNNEIVQNINTI--SKANSANQSVADXLRQ--NIANANLTQKDDAETKX 504
Query: 398 QENKEEFKAKLKE--LLRDKSDAFNSDNPE----------EDKVKLGEPGWKERYYEEKF 445
+ E A + R+ AF+ D E +D +++ EPG+++RYY+ KF
Sbjct: 505 YSSSEPIDASTTDDSRKRNTDSAFSXDTEESTSGALVDNNDDVIRMWEPGFRKRYYQAKF 564
Query: 446 NAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNI 505
+ + E+ E+ +++V Y EG+ WV+ YYY+G SW W+YP+HYAPFA D K+L ++
Sbjct: 565 HTQDEEQLEQICRNMVKGYVEGISWVLLYYYQGCPSWNWYYPFHYAPFALDFKNLTDIDV 624
Query: 506 SFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSW 565
+FE G PFK F QL+ V P+AS H LP+ + LM D +S I DFYP +F+VDMNG + SW
Sbjct: 625 TFERGXPFKXFEQLMSVLPAASKHNLPDVFGPLMCDEDSEIIDFYPKEFQVDMNGAKMSW 684
Query: 566 QGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
QGI+ LPFIDE RLL V+ +LT EE RN++ ++L +
Sbjct: 685 QGISLLPFIDEKRLLKAVRSKYGSLTPEEVERNTLKHEILLI 726
>gi|330916061|ref|XP_003297277.1| hypothetical protein PTT_07622 [Pyrenophora teres f. teres 0-1]
gi|311330133|gb|EFQ94619.1| hypothetical protein PTT_07622 [Pyrenophora teres f. teres 0-1]
Length = 883
Score = 457 bits (1177), Expect = e-125, Method: Compositional matrix adjust.
Identities = 282/768 (36%), Positives = 415/768 (54%), Gaps = 74/768 (9%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDS------QVFDSNVITPGT 54
MNQQRSRRFRA+++A + E ++ + D+ + +DSN ITPGT
Sbjct: 111 MNQQRSRRFRAAREAKEKDEERAEFQKILNSQKASRGEDIDTLEEVMEKTWDSNAITPGT 170
Query: 55 EFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPN 114
FM +L+ +LQY+ + DP W+ +KVI+SDA+VPGEGEHKIM+++R QR +P +DPN
Sbjct: 171 PFMHLLAESLQYWCAYKFTTDPSWKDMKVIISDASVPGEGEHKIMNFIRSQRAMPTHDPN 230
Query: 115 TRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKR 173
T H +YGLDADLIML+LATHE HF +LRE VF +DK C CG+ GH+ NCE
Sbjct: 231 TSHVIYGLDADLIMLSLATHEPHFKVLREDVFYDSGKDKVCTRCGRKGHIRTNCEFPEDE 290
Query: 174 KAGEFDEKGDEVVVPK---KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMC 230
K +E +E + KPY +LH LREYL E P F+ DLE +DD++FMC
Sbjct: 291 KKLTEEEAAEEWATSEHQLKPYIWLHTNVLREYLAVEMDTPKRTFKYDLERSLDDWVFMC 350
Query: 231 FFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSY 290
FFVGNDFLPH+P+LEIR+ I+LL+++++ + Y+T P +RRV+ + A+ +
Sbjct: 351 FFVGNDFLPHLPSLEIRDQGIDLLISIWRDLAAEMDDYVTKDGYPDMRRVQQIMSALATR 410
Query: 291 EDRIFQKRARLHQRHAERIKREKAQA----RRGDDVEPLAQP--DSLVPVSRFHGSRLAS 344
E IF+KR + R A R +AQ+ R+ D + ++ P + + S
Sbjct: 411 EAGIFKKRKEVSDRQAANRARREAQSNAHKRQRTDNDGVSAPGFKRAKETTDTYTSAGIV 470
Query: 345 GPSPSPYQQSEC------VGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDP- 397
P Q E + + + ++ L G ++ E E + +++P
Sbjct: 471 FFDPKDAQSKEVRDVHKDIMHTRDSQSNKSAAARLKELLKAKADGTSLPEPEQTPDSEPA 530
Query: 398 --QENKEEFKAKLKELLRDKSDAFNS------------------------DNPEEDKVKL 431
+ E +L + D+ D ++ D+P ED + L
Sbjct: 531 LESASGTETPVQLGKRKLDEVDDLDNGTPGRNTPVVPQSPTQAAQPPKKDDSPPEDTIML 590
Query: 432 GEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYA 491
E G++ERYYE+KF+ P + R V +Y EGLCWV+ YY +G SW W++P+HYA
Sbjct: 591 WEDGYEERYYEQKFHV-APNDI-AFRNKVARQYAEGLCWVLAYYMQGCPSWTWYFPHHYA 648
Query: 492 PFASD---LKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISD 548
PFA+D L+D+D + FE G PF P+ QL+GV P+AS+HA+PE +R LM DPNS I D
Sbjct: 649 PFAADFVGLEDMDPRKL-FEKGVPFHPYEQLMGVLPAASNHAIPEPFRVLMEDPNSSIVD 707
Query: 549 FYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVL 608
FYP DF +D+NGK+++WQG+A LPFIDE RLL+ + L+++E +RN + L
Sbjct: 708 FYPEDFPIDLNGKKFAWQGVAVLPFIDEKRLLEAMGTKYPELSDDERKRNEFGKETLM-- 765
Query: 609 LSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISP----CAGDPHPPVFR 664
S D+ K L K + K +++P S ++G I P P F
Sbjct: 766 ----FSQESGLFDDVEKALYRKG--QQKHKIDPAKSRALHGDIEPHDLFVMDSQLVPPFD 819
Query: 665 SPVASMEDIMGNQVLCAIYKLPD-----AHKHVTRPPAGVIFPKKIVQ 707
+ + +I ++ + Y++P AHK V GV PK +Q
Sbjct: 820 ADGTTDFEITQDRSMRVYYEMPSVSSSRAHKSVLL--EGVKLPKPALQ 865
>gi|354468134|ref|XP_003496522.1| PREDICTED: 5'-3' exoribonuclease 2-like [Cricetulus griseus]
Length = 1045
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 292/742 (39%), Positives = 401/742 (54%), Gaps = 88/742 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 185 MNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNL 244
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 245 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 304
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 305 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCALCNQFGHEVKDCEGLPREKKGKHDE 363
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + F+ + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 364 LADSLPCAEGEFIFIRLNVLREYLERELTMASLPFPFDVERSIDDWVFMCFFVGNDFLPH 423
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIREGAI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 424 LPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKD 483
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSE 355
R K ++ + +R +P P ++ G +AS P + Y+
Sbjct: 484 DEDSFRRRQKEKRKRMKRD---QPAFTPSGILTPHALGSRNSPGCHVASNPRQAAYEMRM 540
Query: 356 CVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENS-FETDPQENKEEFKAKLKELLRD 414
+ + S G+ +AE+S E +P++N ++A K+ R
Sbjct: 541 ------HSNSSPSISPNTSFASDGSPSPGIKRKAEDSDSEPEPEDNVRLWEAGWKQ--RY 592
Query: 415 KSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 474
+ F+ D +EKF K + E VLRY
Sbjct: 593 YKNKFDVDA-----------------ADEKFRRKVVQSYVEGLC-WVLRY---------- 624
Query: 475 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPE 533
YY+G SW+W+YP+HYAPFASD + + + FE G PFKP QL+GVFP+AS + LP
Sbjct: 625 YYQGCASWKWYYPFHYAPFASDFEGIADMSSEFEKGTKPFKPLEQLMGVFPAASGNFLPP 684
Query: 534 HYR---------------KLMTDP--------NSPISDFYPTDFEVDMNGKRYSWQGIAK 570
+R + + + +S I DFYP DF +D+NGK+Y+WQG+A
Sbjct: 685 SWRNSRENIRQGLRETSLRFLVESIAVCSHSQDSSIIDFYPEDFAIDLNGKKYAWQGVAL 744
Query: 571 LPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIK 630
LPF+DE RL ++++ LT EE RRNS+ D++FV HPL I L Q
Sbjct: 745 LPFVDERRLRAALEEVYPDLTPEENRRNSLGGDVMFVGKLHPLHDFILEL----YQTGST 800
Query: 631 ERVEVKERLNPELSDGMNGYISPCAGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPD-A 688
E ++V PEL G+ G S P SPV + D+ N + +K P A
Sbjct: 801 EPIDVP----PELCHGIQGKFSLDEEAILPDQTVCSPVPMLRDLTQNTAVSINFKDPQFA 856
Query: 689 HKHV--------TRPPAGVIFP 702
+V R PA V+ P
Sbjct: 857 EDYVFKAVMLPGARKPAAVLKP 878
>gi|254571933|ref|XP_002493076.1| Nuclear 5' to 3' single-stranded RNA exonuclease, involved in RNA
metabolism [Komagataella pastoris GS115]
gi|238032874|emb|CAY70897.1| Nuclear 5' to 3' single-stranded RNA exonuclease, involved in RNA
metabolism [Komagataella pastoris GS115]
gi|328352909|emb|CCA39307.1| 5'-3' exoribonuclease 2 [Komagataella pastoris CBS 7435]
Length = 994
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 269/726 (37%), Positives = 388/726 (53%), Gaps = 79/726 (10%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPK-SDSQVFDSNVITPGTEFMAV 59
MNQQRSRRFR+++DA D+ ++ +E E++G + + + +DSN ITPGT FM
Sbjct: 110 MNQQRSRRFRSAQDAKDANEKKAAELKEMEKKGEIIDDAIKNKKTWDSNAITPGTPFMHR 169
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
L+ +L+Y+ +L DPGW I+VI+SDA+VPGEGEHKIMSYVR R+ P +DPNT HC+
Sbjct: 170 LADSLRYWAAYKLTTDPGWSGIEVIISDASVPGEGEHKIMSYVRSLRSSPKHDPNTTHCI 229
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
YGLDADLI L LATHE HF ILRE VF QDK Q + E +
Sbjct: 230 YGLDADLIFLGLATHEPHFKILREDVFA---QDKKSYSLQDQLRMTDIERQ--------- 277
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
E+ K P+ +LH+ LREYL E +P F DLE +DD++F+CFF GNDFLP
Sbjct: 278 ----ELKDKKTPFLWLHLNILREYLQIELNVPGLSFPFDLEKSIDDWVFICFFCGNDFLP 333
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+L++R+ +I L+ ++K+ + GYLT +L VE + + ED IF+KR
Sbjct: 334 HLPSLDVRDNSITTLVTIWKQILPTMKGYLTTDGYLNLPAVERLLAELAKKEDYIFRKRY 393
Query: 300 RLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGR 359
+R E KR K LAQ S + +++G +P ++ +
Sbjct: 394 EDEKRSLENQKRRK-----------LAQEQS--SARSQNAPNISTGKDKAPLTPNQNIPL 440
Query: 360 LDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSF-ETDPQENKEEFKAKLK--------- 409
+ G + + + + EA S E Q + E K K
Sbjct: 441 YTTSGESVGIKMTDSEMVNNSALITKANEANKSIAELLKQNLQNEINKKRKISNEEQEVV 500
Query: 410 -----------ELLRDKSDAFNSDN----PEEDKVKLGEPGWKERYYEEKFNAKTPEERE 454
+ + SD +S P+ ++++L EPG+++RYYE KF+ K P++ +
Sbjct: 501 KESVEEVVEEEDDVLVTSDPEDSSTEILIPKNEEIRLWEPGYRKRYYETKFHTKDPQKVK 560
Query: 455 ETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFK 514
+ +++V +Y EG+ WV+ YYY+G SW W+YPYHYAPFA+D +L + I F G PF+
Sbjct: 561 KIARNMVQKYIEGVSWVLLYYYQGCPSWNWYYPYHYAPFAADFVNLSELKIEFVEGTPFR 620
Query: 515 PFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFI 574
P+ QL+ V P+ASSH LP+ +R LM+D NS I DFYP +F +DMNGK+ WQ I LPFI
Sbjct: 621 PYEQLMSVLPAASSHNLPDVFRSLMSDANSEIIDFYPEEFPLDMNGKKVIWQAIPLLPFI 680
Query: 575 DEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSH----PLSASIYTLDEHCKQLKIK 630
DE RLL V+ LTE+E RN+ +++L + SH L +Y + + ++
Sbjct: 681 DENRLLKAVQSKYDQLTEDEKFRNTNRSEILVLGRSHSHYPTLVKELYEEGKDSYEFQVD 740
Query: 631 ERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSPVASME------DIMGNQVLCAIYK 684
S G++G V R PV +E DI L +K
Sbjct: 741 -------------SSGVSGVAIKLQSFDRSGVLRLPVKQLEGYRHYPDISNRDFLMVEFK 787
Query: 685 -LPDAH 689
LP +H
Sbjct: 788 QLPKSH 793
>gi|449528758|ref|XP_004171370.1| PREDICTED: 5'-3' exoribonuclease 3-like [Cucumis sativus]
Length = 373
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 218/258 (84%), Positives = 242/258 (93%), Gaps = 1/258 (0%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+KDA D+AAEE RLR+EFE+EGRKLPPK +SQVFDSNVITPGT+FMAVL
Sbjct: 111 MNQQRSRRFRAAKDAIDAAAEETRLREEFEKEGRKLPPKEESQVFDSNVITPGTDFMAVL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
SIALQYY+H+RLNNDPGW+ IKVILSDANVPGEGEHKIMSY+RLQRNLPG+DPNTRHCLY
Sbjct: 171 SIALQYYVHIRLNNDPGWKNIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLY 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIMLALATHEVHFSILRE+VFTPGQQ+KCFLCGQ GH AA+CEGKAKRK+GEFDE
Sbjct: 231 GLDADLIMLALATHEVHFSILREIVFTPGQQEKCFLCGQMGHFAADCEGKAKRKSGEFDE 290
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
K +EV + KKPYQFLHIWTLREYL+YE RIPNPPF ID+E IVDDF+FMCFFVGNDFLPH
Sbjct: 291 KVEEVTI-KKPYQFLHIWTLREYLEYEMRIPNPPFAIDIERIVDDFVFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVY 258
MPTLEIRE + L++ +Y
Sbjct: 350 MPTLEIREVNLMLVLTIY 367
>gi|350537227|ref|NP_001233774.1| ethylene insensitive 5/7 [Solanum lycopersicum]
gi|312063753|gb|ADQ27233.1| 5'-3' exoribonuclease 4 [Solanum lycopersicum]
Length = 978
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 217/314 (69%), Positives = 254/314 (80%), Gaps = 3/314 (0%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFRASKDAA+S AEE+RLR+EFE E L P + DSNVITPGT FMAVL
Sbjct: 107 MNQQRTRRFRASKDAAESEAEEKRLREEFEMEAAILVPTEKPETSDSNVITPGTPFMAVL 166
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
SIALQYYIH RLN + GW KVILSDANVPGEGEHKIMSY+RLQRN+PG++PNTRHCLY
Sbjct: 167 SIALQYYIHSRLNKNAGWRFTKVILSDANVPGEGEHKIMSYIRLQRNIPGFNPNTRHCLY 226
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML+LATHEVHFSILREV+ PGQQ+KCF CGQ GHLAA+C G G+ +
Sbjct: 227 GLDADLIMLSLATHEVHFSILREVITPPGQQEKCFACGQVGHLAASCHG-TNGNHGKDGK 285
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
++ + KK YQFLHIW LREYL Y+ I NPPF+ID E +VDDF+F+CFFVGNDFLPH
Sbjct: 286 AVNDTPIHKKKYQFLHIWVLREYLQYDLEIYNPPFQIDFERVVDDFVFLCFFVGNDFLPH 345
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
MPTLEIREGAINLLM++Y+++F +GGYLTD + L RVEHFIQA YED+IFQKRAR
Sbjct: 346 MPTLEIREGAINLLMSIYRRDFTTMGGYLTDAGEVFLDRVEHFIQAAAVYEDQIFQKRAR 405
Query: 301 LHQ--RHAERIKRE 312
+ Q + ER+++E
Sbjct: 406 IQQSIENNERVRKE 419
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 213/461 (46%), Positives = 274/461 (59%), Gaps = 41/461 (8%)
Query: 424 PEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQ 483
P EDKVKLGEPG+KERYY EKF T E+ E R+DVV +Y EGLCWV YYY+GVCSWQ
Sbjct: 427 PAEDKVKLGEPGYKERYYSEKFGVSTAEDIHEVRQDVVQKYMEGLCWVCRYYYQGVCSWQ 486
Query: 484 WFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPN 543
WFYPYHYAPFASDLK L I+F G PFKPF+QL+GV P+AS+ ALPE YR LM DP+
Sbjct: 487 WFYPYHYAPFASDLKGLADLEITFFPGEPFKPFDQLMGVLPAASAKALPEKYRMLMMDPS 546
Query: 544 SPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMAD 603
SPISDFYPTDFE+DMNGKR++WQ + KLPFIDE +LL E KK+E TLT+ E RNS+M D
Sbjct: 547 SPISDFYPTDFELDMNGKRFAWQAVVKLPFIDEKKLLAETKKLEDTLTDTEQLRNSVMFD 606
Query: 604 MLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVF 663
+L+V H L+ I + H + I R + ++ LS GMNG+I +
Sbjct: 607 LLYVHHHHTLAPYIISYYHH--NVMIPSRAQRPWIIDANLSGGMNGFIWLSERNGLRDRV 664
Query: 664 RSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKPAPVLWHEDSG 723
SP+ +EDI+ N++L + P HKH+T+PP GV PKK+++ D+KP PVLWHED G
Sbjct: 665 PSPLNGLEDILNNKILNITFLNPAPHKHITQPPEGVFMPKKMLRAVDIKPFPVLWHEDHG 724
Query: 724 RRPHE-NGRHNPHGTISGRQLGEAAHRLVANSLQHMKVDRNGYGDRMHGSPLPYAAAPYV 782
R H R + G I+G LGEAAHRL+ N+L ++K
Sbjct: 725 TRRHLGKDRGSVPGAIAGPSLGEAAHRLLKNTL-NIK----------------------- 760
Query: 783 PPVPSYQEYGVYDQGYNRFSQPRTDSYPAGHSQSSISAAQPP-YDGGYSQHYASNTSHHP 841
P +GV DQ ++R ++ H + A P Y+GG+ + S
Sbjct: 761 ---PGGTNFGVLDQSFSR-------NFSGNHVLNRPRPAGPSCYEGGFYDQMSRRNSSPN 810
Query: 842 NRRYHPQYDRNSSGEHPTHLYNPSGIH---QNGGPRYPPRP 879
+R P ++SG Y PS + +G PRY P P
Sbjct: 811 HRPRFPGPSGHASGFFEDPSYFPSNLMPRGASGNPRYAPSP 851
>gi|384490873|gb|EIE82069.1| hypothetical protein RO3G_06774 [Rhizopus delemar RA 99-880]
Length = 967
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 295/754 (39%), Positives = 411/754 (54%), Gaps = 63/754 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA++ A ER+ E G++ + FDSN ITPGT FMA L
Sbjct: 111 MNQQRSRRFRAAQLAQIERDASERVAYELAAIGQEHQMEKKESHFDSNCITPGTPFMAHL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+I + N DP W+K+KVILSDA VPGEGEHK+M ++R++R+ +DPNT H +Y
Sbjct: 171 ATCLRYHIASKQNTDPLWKKLKVILSDATVPGEGEHKVMEFIRVERSRSEHDPNTSHVMY 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQ-QDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADLIMLAL THE HF I+RE VF + + C C + GH A C A
Sbjct: 231 GLDADLIMLALGTHEPHFKIIREDVFADNKRKSNCTNCNRRGHTADKCPLSEDSAAEPSK 290
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDY--EFRIPNPPFEIDLECIVDDFIFMCFFVGNDF 237
+ + KPY FLH+ LREYL+Y +F IP P+ +LE +DD++FMCFFVGNDF
Sbjct: 291 DDNSNL----KPYVFLHVNILREYLEYALKFNIPGIPW--NLERAIDDWVFMCFFVGNDF 344
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
LPH+P+LEIREGAI+ L ++KK +GGY+T L+RV+ + +G ED IF+
Sbjct: 345 LPHLPSLEIREGAISTLSLLWKKCMPMMGGYMTKDGDVDLKRVQVLVSELGHMEDTIFRD 404
Query: 298 RARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECV 357
R +R A+ KR K + R + + +S ++ + + P+ + +
Sbjct: 405 RKAGEERRAQGAKRRKLENERRANEAKSREDNSFAVMT----AAPVNNPNAAMTNREVVA 460
Query: 358 GRLD------------NGKGTSGRPHKVPRLSSGA--TIGAAIVEAENSFET-------- 395
R + + + P + G T A V+ N E
Sbjct: 461 NRAELRLANLSAAAALKAQMNESSEQEPPMVQKGTKRTAEEAGVDDTNDEENEEDSSITE 520
Query: 396 ------DPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKT 449
DP E + ++ + + K DA P +D+V+L E GWKERYY KF
Sbjct: 521 DEPDTFDPVEAGKAILKRVADEKKQKDDAAREREP-DDEVRLWESGWKERYYGTKFRLNL 579
Query: 450 PEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFEL 509
EE++E R ++V Y EGL WV YYY G SW W+YPY+YAP ASD ++D F+I FE
Sbjct: 580 -EEKDEIR-EIVKSYCEGLIWVFKYYYLGCVSWSWYYPYYYAPMASDFINIDSFDIKFEK 637
Query: 510 GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIA 569
P +PF QL+GV P+AS +P + LMTD NSPI D+YPT FEVDM+GK++ WQG+
Sbjct: 638 SAPLRPFEQLMGVLPAASRSHIPAPFHPLMTDENSPIIDYYPTHFEVDMDGKKWEWQGVV 697
Query: 570 KLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKI 629
KLPFI+ RLL + + L EEE +RNS+ +L+V SH A + D + K
Sbjct: 698 KLPFINSERLLAAMDTVYDQLNEEEVQRNSVGPAVLYVSESH--KAYNFLSDVYTK---- 751
Query: 630 KERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSPVAS--MEDIMGNQVLCAIYKLPD 687
R K LN L+DG+ G I F SP+ + + DI ++ + Y+LP
Sbjct: 752 --RSSDKAILNARLTDGLTGEIDKDPECIPNSTFYSPLPNHDLPDINNDKSISVTYELP- 808
Query: 688 AHKHVTRPPAGVIFPKKIVQLEDLKPAPVLWHED 721
+ P +F ++ L+ +K A L +ED
Sbjct: 809 ------KLPESFVFSTQL--LKGVKIANSLGYED 834
>gi|294953215|ref|XP_002787652.1| 5'-3' exoribonuclease, putative [Perkinsus marinus ATCC 50983]
gi|239902676|gb|EER19448.1| 5'-3' exoribonuclease, putative [Perkinsus marinus ATCC 50983]
Length = 982
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 261/670 (38%), Positives = 383/670 (57%), Gaps = 62/670 (9%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRF+A+++A + EEE+LR++ +EGR+ PP +DSNVITPGT F+ +
Sbjct: 119 MNQQRARRFKAAQEATEQMKEEEKLRRQMVKEGRE-PPSKKGVPWDSNVITPGTPFLDKV 177
Query: 61 SIALQYYIHLRLNNDPGWEKI--KVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHC 118
+ L +YI R+ NDP W+ + + ILSDA PGEGEHKIM ++R QR + GY+PNT H
Sbjct: 178 AHMLHWYISDRMTNDPLWQLLGFRCILSDAGSPGEGEHKIMDFIRKQRMMEGYNPNTTHM 237
Query: 119 LYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEF 178
LYG DADLIML LATHE+ F I+REVV P ++ KC+LCG+ GHL + C G ++
Sbjct: 238 LYGADADLIMLGLATHEISFYIIREVVLKP-EERKCYLCGKVGHLPSECTGDDQQPDLGD 296
Query: 179 DEKGDEVVVPKKPYQFLHIWTLREYLDYEFRI----PNP----PFEIDLECIVDDFIFMC 230
+ + DE ++ KP+Q + + LREYL +F PN PF D+E ++DDF+FMC
Sbjct: 297 ESEEDEDMLEMKPFQIISLPVLREYLVEQFTTAFCPPNQKCILPFPFDVERVIDDFVFMC 356
Query: 231 FFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSY 290
FFVGNDFLPH+P+L IR+G+I+ ++ +Y + L YLT + +L +VE F+ +G
Sbjct: 357 FFVGNDFLPHLPSLNIRDGSIDQMICLYVEILPTLTDYLTCQGEVNLVQVEVFLDYLGRV 416
Query: 291 EDRIFQKRARLHQRHAERIKREKAQAR----RGDDVEPLAQPDSLVPVSRFHGSRLASGP 346
ED +F++R +R K+++ Q R +G L + +L +
Sbjct: 417 EDEVFRRRLA----RDDRFKQQRLQGRFINQKGGGANSSRTKRPLEDANVLQARKLLAAL 472
Query: 347 SPSPYQQSECVGRLDNGKGT-SGRPHKVPRLSSGATIG------AAIVEAENS----FET 395
+ D G T +P KVP ++ A G + E +N+ F
Sbjct: 473 A-------------DPGSDTEKDKPKKVPTEATEAPTGKQGRHRTVLTEEDNASPPVFPP 519
Query: 396 DPQENKE-----EFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPG---WKERYYEEKFNA 447
EN + EF+ +++ +RDK D P D+V+LGE G WK+RYY +KF+
Sbjct: 520 SEGENLDTAEVVEFQETVRQRVRDKQD-LGEKYP--DRVRLGEGGEHSWKQRYYTDKFHV 576
Query: 448 KTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNIS- 506
T E+ + + Y EG+CWV+ YYY+GV SW WFYPYHYAPFA+DL +
Sbjct: 577 -TQEDFADFIPRIRKAYVEGICWVLQYYYQGVVSWDWFYPYHYAPFATDLVGCSALECNK 635
Query: 507 ---FELGHPFKPFNQLLGVFP--SASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGK 561
+ G PF P QL+ V P S +P +KLMT+PNS I DFYP DF +D+NGK
Sbjct: 636 ASYYTKGKPFLPLQQLMSVLPPRSGPPADIPVEMQKLMTEPNSSIIDFYPEDFALDLNGK 695
Query: 562 RYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLD 621
+++WQ + LPFI + RL+ ++ L E RRN+ LFV ++ L+ + +
Sbjct: 696 KFTWQAVILLPFIIQDRLIAALQPFIDKLDGERKRRNTPAEPRLFVHMNDTLAPQLQRVH 755
Query: 622 EHCKQLKIKE 631
+ K+ +++
Sbjct: 756 DGGKEAALED 765
>gi|167861118|gb|ACA05276.1| putative ethylene insensitive 5/7 [Solanum lycopersicum]
Length = 696
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 216/314 (68%), Positives = 253/314 (80%), Gaps = 3/314 (0%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFRASKDAA+S AEE+RLR+EFE E L P + DSNVITPGT FMAVL
Sbjct: 107 MNQQRTRRFRASKDAAESEAEEKRLREEFEMEAAILVPTEKPETSDSNVITPGTPFMAVL 166
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
SIALQY IH RLN + GW KVILSDANVPGEGEHKIMSY+RLQRN+PG++PNTRHCLY
Sbjct: 167 SIALQYNIHSRLNKNAGWRFTKVILSDANVPGEGEHKIMSYIRLQRNIPGFNPNTRHCLY 226
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML+LATHEVHFSILREV+ PGQQ+KCF CGQ GHLAA+C G G+ +
Sbjct: 227 GLDADLIMLSLATHEVHFSILREVITPPGQQEKCFACGQVGHLAASCHG-TNGNHGKDGK 285
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
++ + KK YQFLHIW LREYL Y+ I NPPF+ID E +VDDF+F+CFFVGNDFLPH
Sbjct: 286 AVNDTPIHKKKYQFLHIWVLREYLQYDLEIYNPPFQIDFERVVDDFVFLCFFVGNDFLPH 345
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
MPTLEIREGAINLLM++Y+++F +GGYLTD + L RVEHFIQA YED+IFQKRAR
Sbjct: 346 MPTLEIREGAINLLMSIYRRDFTTMGGYLTDAGEVFLDRVEHFIQAAAVYEDQIFQKRAR 405
Query: 301 LHQ--RHAERIKRE 312
+ Q + ER+++E
Sbjct: 406 IQQSIENNERVRKE 419
Score = 315 bits (808), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 153/272 (56%), Positives = 190/272 (69%), Gaps = 2/272 (0%)
Query: 424 PEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQ 483
P EDKVKLGEPG+KERYY EKF T E+ E R+DVV +Y EGLCWV YYY+GVCSWQ
Sbjct: 427 PAEDKVKLGEPGYKERYYSEKFGVSTAEDIHEVRQDVVQKYMEGLCWVCRYYYQGVCSWQ 486
Query: 484 WFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPN 543
WFYPYHYAPFASDLK L I+F G PFKPF+QL+GV P+AS+ ALPE YR LM DP+
Sbjct: 487 WFYPYHYAPFASDLKGLADLEITFFPGEPFKPFDQLMGVLPAASAKALPEKYRMLMMDPS 546
Query: 544 SPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMAD 603
SPISDFYPTDFE+DMNGKR++WQ + KLPFIDE +LL E KK+E TLT+ E RNS+M D
Sbjct: 547 SPISDFYPTDFELDMNGKRFAWQAVVKLPFIDEKKLLAETKKLEDTLTDTEQLRNSVMFD 606
Query: 604 MLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVF 663
+L+V H L+ I + H + I R + ++ LS GMNG+I +
Sbjct: 607 LLYVHHHHTLAPYIISYYHH--NVMIPSRAQRPWIIDANLSGGMNGFIWLSERNGLRDRV 664
Query: 664 RSPVASMEDIMGNQVLCAIYKLPDAHKHVTRP 695
SP+ +EDI+ N++L + P HKH+T+P
Sbjct: 665 PSPLNGLEDILNNKILNITFLNPAPHKHITQP 696
>gi|448528644|ref|XP_003869739.1| Rat1 5'-->3' exoribonuclease [Candida orthopsilosis Co 90-125]
gi|380354093|emb|CCG23606.1| Rat1 5'-->3' exoribonuclease [Candida orthopsilosis]
Length = 964
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 258/642 (40%), Positives = 367/642 (57%), Gaps = 66/642 (10%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKL-PPKSDSQVFDSNVITPGTEFMAV 59
MNQQR+RRFR+++DA ++ +E E G + + +DSN ITPGT FM
Sbjct: 106 MNQQRARRFRSAQDAKFKQMAIDKEIREKEARGEMINDAVKGKKQWDSNAITPGTPFMDR 165
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
L+ AL+Y++ +L+ DPGW ++VI+SDA VPGEGEHK+MS++R QR+ P Y+PNT+HC+
Sbjct: 166 LAEALRYWVAYKLSTDPGWANLQVIISDATVPGEGEHKLMSFIRSQRSDPQYNPNTKHCI 225
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHL-AANCEGKAKRKAGEF 178
YGLDADLI L LATHE HF +LRE VF Q H+ ++ G +K +
Sbjct: 226 YGLDADLIFLGLATHEPHFRVLREDVF----------ANQERHMTVSDHVGMSKDQLSLI 275
Query: 179 DEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFL 238
+E+ +KP+ +LH+ LREYL E P F DLE +DD++F+CFF GNDFL
Sbjct: 276 EERDK-----RKPFLWLHVNVLREYLSIELFNPQISFSFDLERAIDDWVFICFFAGNDFL 330
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 298
PH+P+L++R+ I+ L+ +KK L YLT K +L+ VE + + ED IF+ R
Sbjct: 331 PHLPSLDVRDNGIDTLVNCWKKCLPRLRDYLTCDGKLNLQSVETLLGDLAIKEDEIFRNR 390
Query: 299 -------------ARLHQRHAERIKRE-KAQARRGDDVEPLAQPDSLVPVSRFHGSRLAS 344
R+ + + +K +Q +G D P+A PD+ +P+ GS +
Sbjct: 391 FAAEKRREENRKRRRVAEEQDKALKNVYMSQVTKGKDKAPVA-PDTNLPLMDTSGSIV-- 447
Query: 345 GPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAI-----VEAENSFETDP-- 397
E +L N R L+ A AA+ ++++ + D
Sbjct: 448 ----------EGHAQLSNKDLVQNR--DTIALAGMANNDAAVALKKLIDSKKQLQEDTPL 495
Query: 398 ---------QENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAK 448
+ ++ + ++ + D P +D ++L EPG+++RYY+ KF+ K
Sbjct: 496 DSESSAPSNSASNANTDSEEPQQVKTRKRPVEDDEPVDD-IRLHEPGYQKRYYQAKFHCK 554
Query: 449 TPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQF---NI 505
T EE E+ R+DVV Y EG+ WV YYY+G SW WFYPYHYAPFASD+ +L + I
Sbjct: 555 TDEEVEQVRRDVVKSYIEGISWVALYYYQGCPSWTWFYPYHYAPFASDMTNLRELFPGGI 614
Query: 506 SFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSW 565
F LG PFKP+ QL+ V P+ASSHALPE + LM DP+S I +FYP +FE+DMNGK+ SW
Sbjct: 615 KFNLGEPFKPYEQLMSVLPAASSHALPEVFHALMKDPDSEIIEFYPEEFEIDMNGKKMSW 674
Query: 566 QGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
QGI LPFI+E RLLD V+ LTE E RN+ LF+
Sbjct: 675 QGIPLLPFINEKRLLDAVQGKYDQLTEYEKERNTNKQAELFI 716
>gi|393910764|gb|EJD76029.1| CBR-XRN-2 protein [Loa loa]
Length = 764
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 285/711 (40%), Positives = 383/711 (53%), Gaps = 70/711 (9%)
Query: 57 MAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTR 116
MA L++AL+YY+H RLN+DPGWEK+ VILSDANVPGEGEHKIM ++R QR P +DPNT
Sbjct: 1 MARLAVALRYYVHQRLNSDPGWEKVAVILSDANVPGEGEHKIMDFIRRQRASPSHDPNTV 60
Query: 117 HCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAG 176
HCL G DADLIML LATHE +F+I+RE F P QQ C LCGQ GH +C+G A
Sbjct: 61 HCLCGADADLIMLGLATHEPNFNIIRE-EFMPNQQRPCDLCGQYGHDLNDCKGLALDDDS 119
Query: 177 EFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGND 236
E + + + F+ + LREYL+ E IPN DLE +DD++FMCFFVGND
Sbjct: 120 ECQSSP---LQKETNFIFVRLPVLREYLERELHIPNSSIPFDLERAIDDWVFMCFFVGND 176
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLPH+P+LEIRE AI+ L+ +YK + G+LTD + R + + +G ED IF+
Sbjct: 177 FLPHLPSLEIRENAIDRLVKLYKDMVYEMKGHLTDSGVVHIERAQIILNKLGEVEDEIFK 236
Query: 297 KRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSEC 356
R Q+ + K +K + + L P + F + +GP C
Sbjct: 237 SRQEREQQFKRKNKEKKRRE------KALMTPSYISSRGSFLAPQ-TNGPI--------C 281
Query: 357 VGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFET--DPQENKEEFKAKLKELLRD 414
+ G++ R A + +EA + ET P + E EL D
Sbjct: 282 LS------GSNTR----------AMARTSRLEALDFIETLHVPGISVSENSCHRHELKDD 325
Query: 415 KSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 474
S S++ D+V+L E GWK+RYY+ KF + R+ V L Y EGLCWV+HY
Sbjct: 326 SS----SEDEVFDEVRLWEDGWKDRYYKSKFQVDGKD--IVFRRKVALAYVEGLCWVLHY 379
Query: 475 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFE-LGHPFKPFNQLLGVFPSASSHALPE 533
YY+G SW W+YP+HYAPFASD + QF F PFKP QL+ VFP+AS LPE
Sbjct: 380 YYQGCASWDWYYPFHYAPFASDFDAVSQFKPDFSACTEPFKPLQQLMSVFPAASRVHLPE 439
Query: 534 HYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEE 593
+++LM P SPI DFYP +F +D+NGK+ +WQG+A LPF+DE RLL+ +K +E L
Sbjct: 440 AWQELMISPTSPIIDFYPDNFVIDLNGKKCAWQGVALLPFVDEKRLLEVLKPMEDKLDAF 499
Query: 594 EARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISP 653
E RNS D LFV SHP L E+ K+ I ++ L+ GM G +
Sbjct: 500 EKERNSRGPDRLFVGPSHPFYKFAEELYENSKEDSIALSIDTS------LTFGMAGTVGV 553
Query: 654 CAGDPHP-PVFRSP--VASMEDIMGNQVLCAIYKLPDAHK----HVTRPPAGVIFPKKIV 706
A ++SP V DI N+ + IYK P+ + R P V P+ +
Sbjct: 554 DAKAVMKGQNYKSPFSVDEFTDIAKNKAIMMIYKDPEFERGYVFATKRLPGAVDVPRTLK 613
Query: 707 QL-----EDLKPA-----PVLWH--EDSGRRPHENGR-HNPHGTISGRQLG 744
+ E +P +L H D+GRR E G H+P Q+G
Sbjct: 614 DINLDRRESYRPQIGFSREILRHGLSDAGRRMVERGIGHSPRPLFETYQIG 664
>gi|312089591|ref|XP_003146304.1| hypothetical protein LOAG_10732 [Loa loa]
Length = 686
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 267/629 (42%), Positives = 350/629 (55%), Gaps = 68/629 (10%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+A + + R E EG L
Sbjct: 111 MNQQRSRRFRASKEAIEKVEQIAETRSRLESEGYPL------------------------ 146
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
++AL+YY+H RLN+DPGWEK+ VILSDANVPGEGEHKIM ++R QR P +DPNT HCL
Sbjct: 147 AVALRYYVHQRLNSDPGWEKVAVILSDANVPGEGEHKIMDFIRRQRASPSHDPNTVHCLC 206
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P QQ C LCGQ GH +C+G A E
Sbjct: 207 GADADLIMLGLATHEPNFNIIRE-EFMPNQQRPCDLCGQYGHDLNDCKGLALDDDSECQS 265
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
+ + + F+ + LREYL+ E IPN DLE +DD++FMCFFVGNDFLPH
Sbjct: 266 SP---LQKETNFIFVRLPVLREYLERELHIPNSSIPFDLERAIDDWVFMCFFVGNDFLPH 322
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIRE AI+ L+ +YK + G+LTD + R + + +G ED IF+ R
Sbjct: 323 LPSLEIRENAIDRLVKLYKDMVYEMKGHLTDSGVVHIERAQIILNKLGEVEDEIFKSRQE 382
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRL 360
Q+ + K +K + + L P + F + +GP C+
Sbjct: 383 REQQFKRKNKEKKRRE------KALMTPSYISSRGSFLAPQ-TNGPI--------CLS-- 425
Query: 361 DNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFET--DPQENKEEFKAKLKELLRDKSDA 418
G++ R A + +EA + ET P + E EL D S
Sbjct: 426 ----GSNTR----------AMARTSRLEALDFIETLHVPGISVSENSCHRHELKDDSS-- 469
Query: 419 FNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEG 478
S++ D+V+L E GWK+RYY+ KF + R+ V L Y EGLCWV+HYYY+G
Sbjct: 470 --SEDEVFDEVRLWEDGWKDRYYKSKFQVDGKDIV--FRRKVALAYVEGLCWVLHYYYQG 525
Query: 479 VCSWQWFYPYHYAPFASDLKDLDQFNISFE-LGHPFKPFNQLLGVFPSASSHALPEHYRK 537
SW W+YP+HYAPFASD + QF F PFKP QL+ VFP+AS LPE +++
Sbjct: 526 CASWDWYYPFHYAPFASDFDAVSQFKPDFSACTEPFKPLQQLMSVFPAASRVHLPEAWQE 585
Query: 538 LMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARR 597
LM P SPI DFYP +F +D+NGK+ +WQG+A LPF+DE RLL+ +K +E L E R
Sbjct: 586 LMISPTSPIIDFYPDNFVIDLNGKKCAWQGVALLPFVDEKRLLEVLKPMEDKLDAFEKER 645
Query: 598 NSIMADMLFVLLSHPLSASIYTLDEHCKQ 626
NS D LFV SHP L E+ K+
Sbjct: 646 NSRGPDRLFVGPSHPFYKFAEELYENSKE 674
>gi|224131346|ref|XP_002328516.1| predicted protein [Populus trichocarpa]
gi|222838231|gb|EEE76596.1| predicted protein [Populus trichocarpa]
Length = 948
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/328 (69%), Positives = 261/328 (79%), Gaps = 2/328 (0%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+KDAA + AEEERLR+EFE EG L K + DSNVITPGT+FMAVL
Sbjct: 112 MNQQRSRRFRAAKDAAQAEAEEERLRKEFEAEGVLLSVKEKPETRDSNVITPGTQFMAVL 171
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
SIALQYYI RLN++PGW+ KVILSDANVPGEGEHKIMSY+RLQRN+PG++ NTRHCLY
Sbjct: 172 SIALQYYIQSRLNHNPGWQNTKVILSDANVPGEGEHKIMSYIRLQRNIPGFNSNTRHCLY 231
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML+LATHEVHFSILRE+V PGQQDKCFLCGQ GHLAA C GK A +++
Sbjct: 232 GLDADLIMLSLATHEVHFSILREMVIFPGQQDKCFLCGQAGHLAAECRGKQGDDALDWNV 291
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D+ + KK YQFL+IW LREYL Y+ IPNPPF ID E IVDDF+FMCFFVGNDFLPH
Sbjct: 292 V-DDTPIHKKKYQFLNIWVLREYLQYDLDIPNPPFAIDFEKIVDDFVFMCFFVGNDFLPH 350
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
MPTLEIREGAINLLM +Y++EF A+GGYLT + L +VEHFIQ+V YE++IFQKRAR
Sbjct: 351 MPTLEIREGAINLLMHIYRREFSAMGGYLTLAGEVFLDKVEHFIQSVAVYEEQIFQKRAR 410
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQP 328
+ Q E + K +ARR E A P
Sbjct: 411 IQQAF-ENNEEMKHKARRDLSEEIQAPP 437
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/385 (52%), Positives = 258/385 (67%), Gaps = 11/385 (2%)
Query: 399 ENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRK 458
EN EE K K + RD S+ + P DKVKLGEPG+KERYY EKF+ EE ++ K
Sbjct: 416 ENNEEMKHKAR---RDLSEEIQA--PPVDKVKLGEPGYKERYYAEKFDLSNEEEIDKVTK 470
Query: 459 DVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQ 518
DVVL+Y EGLCWV YYY+GVCSWQWFYPYHYAPFASD+KDLD+ I+F LG PFKPF+Q
Sbjct: 471 DVVLKYVEGLCWVCRYYYQGVCSWQWFYPYHYAPFASDIKDLDEMEITFFLGEPFKPFDQ 530
Query: 519 LLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEAR 578
L+G P+ASS+ALPE YRKLMTDP+SPI F+P+DFE+DMNGKR++WQGIAKLPFIDE +
Sbjct: 531 LMGTLPAASSNALPEEYRKLMTDPSSPIHQFFPSDFEIDMNGKRFAWQGIAKLPFIDERK 590
Query: 579 LLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKER 638
LL + KK+E TL EEE RNS+M D+L+V HPLS + + H +L + ER+ +K
Sbjct: 591 LLAQTKKLERTLMEEEQVRNSVMRDLLYVHPVHPLSQQVISYYHHNYRLPVSERIALK-- 648
Query: 639 LNPELSDGMNGYISPCAGDPHPPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAG 698
++ S GMNGY+ + V SP+ + + NQVL Y P +H+H+ PP G
Sbjct: 649 IDTRASGGMNGYLWLSERNVWRSVVPSPINGLPTLEYNQVLNITYLTPSSHRHIPEPPEG 708
Query: 699 VIFPKKIVQLEDLKPAPVLWHEDSGRRPHENGRHNPHG--TISGRQLGEAAHRLVANSLQ 756
V+ P+KI++ D+K P LWHED+GRR + GR P ++G LGEAAHRLV N+L
Sbjct: 709 VVMPEKILKPTDIKLFPTLWHEDNGRR--QQGRERPQVPRAVAGPVLGEAAHRLVKNTLN 766
Query: 757 HMKVDRNGYGDRMHGSPLPYAAAPY 781
+ G+ P P A Y
Sbjct: 767 IKPNGSSSRGNYTFNRPRPAGPAGY 791
>gi|401623665|gb|EJS41757.1| rat1p [Saccharomyces arboricola H-6]
Length = 1006
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 273/723 (37%), Positives = 382/723 (52%), Gaps = 93/723 (12%)
Query: 1 MNQQRSRRFRASKDA-ADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAV 59
MNQQR+RRFR+++DA ++ A EE +RQ E + + +DSN ITPGT FM
Sbjct: 110 MNQQRARRFRSARDAQVENEAREEVMRQREEVGEIIDDAVRNKKTWDSNAITPGTPFMDK 169
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
L+ AL+Y+ +L DPGW+ ++VI+SDA VPGEGEHKIM+++R QR P Y+PNT HC+
Sbjct: 170 LAAALRYWTAFKLATDPGWKNLQVIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCI 229
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
YGLDADLI L LATHE HF ILRE VF + + ++ + K +F
Sbjct: 230 YGLDADLIFLGLATHEPHFKILREDVFAQDNRKR-------NNIKDTMNMTEEEK--QFL 280
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
+K + ++P+ +LHI LREYL E +P PF DLE +DD++FMCFF GNDFLP
Sbjct: 281 QKQNS----EQPFLWLHINVLREYLSAELWVPGLPFTFDLERAIDDWVFMCFFCGNDFLP 336
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P L++RE +I++L+ ++K L Y+T +L VE +Q +GS E IF+ R
Sbjct: 337 HLPCLDVRENSIDILLDIWKVVLPRLKTYMTCDGVLNLPSVETLLQHLGSREGDIFKTRH 396
Query: 300 RLHQRHAERIKREKAQAR--RGDDVEPLAQPDSLVPVSRFHGSRLASGP---SPSPYQQS 354
R E +R K Q +G D P+ + L + HG+ LA G + S +
Sbjct: 397 IQEARKKEAFERRKGQKNMSKGQDRHPIVATEQL-QMYDTHGN-LAKGSWNLTTSDMVRL 454
Query: 355 ECVGRLDNG---------KGTSGRPHKVPRLSSGATIGAAIVEAENS------------- 392
+ L N K S + +++ + S I A+ +A S
Sbjct: 455 KKELMLANEGNEDAIAIVKEQSDKNNELMKDISKEEIDDAVSKANKSNFNLAEVMKQKLI 514
Query: 393 -----FETDPQENKE---------------------EFKAKLKELLRDKSDAFNSDNP-- 424
E D +E ++ E KA+++ + D+ D N+D P
Sbjct: 515 HKKHNLEKDNEEEEDISKNTKKIKAEKTESEGDLDTEIKAEIEADVNDREDTENTDLPVK 574
Query: 425 ---------------EEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLC 469
++ VKL EPG+ ERYY KF P + ++ RKD+V Y EG+
Sbjct: 575 NTVIIGEAPQNGVFDTDEYVKLFEPGYHERYYTAKFRV-APHDIDQLRKDMVKCYIEGVA 633
Query: 470 WVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSH 529
WV+ YYY+G SW WFYPYHYAP A+D I FE G PF PF QL+ V P+AS H
Sbjct: 634 WVLTYYYQGCASWNWFYPYHYAPLATDFHGFSHLEIKFEEGTPFLPFEQLMSVLPAASGH 693
Query: 530 ALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHT 589
ALP+ +R LM++ +S I DFYP +F +DMNGK+ SWQGIA LPFID+ RLL V+
Sbjct: 694 ALPKIFRTLMSESDSEIIDFYPEEFPIDMNGKKMSWQGIALLPFIDQDRLLTVVRAQYPL 753
Query: 590 LTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNG 649
L+E E RN +L + S + K+L KE E G++G
Sbjct: 754 LSEAERARNVRGKPVLLI------SNKNANFERFSKKLYSKENNNTVEIKFQHFRSGLSG 807
Query: 650 YIS 652
+S
Sbjct: 808 IVS 810
>gi|255542378|ref|XP_002512252.1| 5'->3' exoribonuclease, putative [Ricinus communis]
gi|223548213|gb|EEF49704.1| 5'->3' exoribonuclease, putative [Ricinus communis]
Length = 964
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 218/318 (68%), Positives = 263/318 (82%), Gaps = 2/318 (0%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+KDAA++ AEEERLR+EFE EG+ L PK + DSNVITPGT+FMAVL
Sbjct: 112 MNQQRSRRFRAAKDAAEAEAEEERLRKEFEAEGKLLSPKEKPETSDSNVITPGTQFMAVL 171
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S LQYY+ +RLN++PGW+ KVILSDANVPGEGEHK+MSY+RLQRNL G++PNTRHCLY
Sbjct: 172 STGLQYYVQMRLNHNPGWKYTKVILSDANVPGEGEHKVMSYIRLQRNLSGFNPNTRHCLY 231
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIMLALATHE+HFSILRE+V PGQQ+KCF CGQ GHLAA+C GK +++
Sbjct: 232 GLDADLIMLALATHEIHFSILREMVTFPGQQEKCFSCGQTGHLAADCRGKPGDNPLDWNV 291
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
+ D+V + KK YQFL+IW LREYL YE +PNPP EI+ E I+DDF+F+CFFVGNDFLPH
Sbjct: 292 E-DDVPIHKKKYQFLNIWVLREYLQYELDVPNPPLEINFERILDDFVFLCFFVGNDFLPH 350
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
MPTLEIREGAINLLM VY++EF A+GGYLTD + +L RVEHFIQ+V YE++IFQKR R
Sbjct: 351 MPTLEIREGAINLLMHVYRREFSAMGGYLTDAGEVNLDRVEHFIQSVAIYEEQIFQKRTR 410
Query: 301 LHQRHAERIKREKAQARR 318
+ Q+ E + + +ARR
Sbjct: 411 I-QQFLENNEEMRLKARR 427
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/359 (54%), Positives = 243/359 (67%), Gaps = 10/359 (2%)
Query: 399 ENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRK 458
EN EE + K + R+ S+ + P DKVKLGEPG+KERYY EKF TP+E ++ R
Sbjct: 416 ENNEEMRLKAR---RESSEEIQT--PAVDKVKLGEPGYKERYYAEKFGLTTPDEIDKVRN 470
Query: 459 DVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQ 518
DVVL+Y EGLCWV YYY+GVCSWQWFYPYHYAPFASDLK L I+F LG PFKPF+Q
Sbjct: 471 DVVLKYVEGLCWVCRYYYQGVCSWQWFYPYHYAPFASDLKGLADLEITFFLGEPFKPFDQ 530
Query: 519 LLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEAR 578
L+G P+ASS+ALPE YRKLMTD +SPIS F+P DFE+DMNGKR++WQGIAKLPFIDE +
Sbjct: 531 LMGTLPAASSNALPEEYRKLMTDSSSPISRFFPLDFEIDMNGKRFAWQGIAKLPFIDERK 590
Query: 579 LLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKER 638
LL + KK+E TLTEEE RNS+M D+L+V +HP++A + + L +R
Sbjct: 591 LLAQTKKLESTLTEEERLRNSVMLDLLYVHPAHPMAAEVIAHYQGFNSLPQYQRKPWA-- 648
Query: 639 LNPELSDGMNGYISPCAGDPHPPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAG 698
++ S GMNGY+ + SPV DI NQVL Y P H+H+ PP G
Sbjct: 649 IDTNASAGMNGYLWLSERNMWRSTIASPVNGFPDIEHNQVLNITYLNPINHRHIPEPPNG 708
Query: 699 VIFPKKIVQLEDLKPAPVLWHEDSGRRPHENGRHNPHG--TISGRQLGEAAHRLVANSL 755
V+ P+KI++ D+KP P+LWHED G R + GR P I+G LGEAAHRLV N+L
Sbjct: 709 VVMPEKILKPLDIKPFPMLWHEDHGGR-RQQGRERPQVARAIAGPLLGEAAHRLVKNTL 766
>gi|154295528|ref|XP_001548199.1| hypothetical protein BC1G_13389 [Botryotinia fuckeliana B05.10]
Length = 854
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 259/688 (37%), Positives = 370/688 (53%), Gaps = 91/688 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR++++A + A ++ L + + +G + + +DSN ITPGT FM +L
Sbjct: 34 MNQQRSRRFRSAQEAKEKAEDKAELLKMLKSQGSHIEETEVKKAWDSNEITPGTPFMDIL 93
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+++L+Y+I +LN DP W K+KVI+SD+ VPGEGEHKIM +VR QR+ P ++PNTRH +Y
Sbjct: 94 ALSLRYWIAYKLNTDPAWAKMKVIISDSTVPGEGEHKIMEFVRSQRSSPDHNPNTRHVMY 153
Query: 121 GLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADLIML LATHE HF ILRE V F G+ C LCGQ GH A C+G K K GEFD
Sbjct: 154 GLDADLIMLGLATHEPHFRILREDVFFNDGKPRTCKLCGQHGHEARECKGMYKIKDGEFD 213
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
EK + KP+ +LH+ LREYL E
Sbjct: 214 EKASAPTL--KPFIWLHVSVLREYLAAEI------------------------------- 240
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
LEIRE IN L+A+++ +GGYLT L R + + + ED IF+KR
Sbjct: 241 ----LEIREDGINTLIAIWRDNIPYMGGYLTKDGHVDLERAQFILDGLAKQEDAIFRKRR 296
Query: 300 RLHQ--RHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPY------ 351
+ + + ++ E+ RG++ P P ++G + G +P+
Sbjct: 297 KNEENFQKKRKLNNERNARGRGNNGGPQDSP--------YNGRQPPGGAAPTGLPLFTPG 348
Query: 352 -QQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETD----PQENKEEFKA 406
E + G +K + A AA+ E N D P+ + ++
Sbjct: 349 VANKEAKAMTHDMVMNRGAAYKASIANKSA--AAALKEMMNGKSADDNGKPKADDTSAES 406
Query: 407 KLKELLRDKSDAFNSDNPEE-----------------------DKVKLGEPGWKERYYEE 443
L + K++ D+ D V+L E G+ +RYYE+
Sbjct: 407 PATALGKRKAELIEDDDSSTPGRNTPTSGTPGTPTTPGDDLPPDTVRLWEDGYADRYYEQ 466
Query: 444 KFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQF 503
KFN + P++ E R +V Y EGL WV+ YY++G SW W+YPYHYAPFA+D +L
Sbjct: 467 KFN-RDPKDI-EFRHEVGRAYVEGLAWVLLYYFQGCPSWDWYYPYHYAPFAADFANLKDM 524
Query: 504 NISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRY 563
I F+ G F+PF QL+GV P+AS A+PE + LMT+ +S I DFYP DF VD+NGK++
Sbjct: 525 KIDFQKGRIFRPFEQLMGVLPAASRQAIPEQFHHLMTNEDSEIIDFYPEDFVVDLNGKKF 584
Query: 564 SWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEH 623
+WQG+A LPFID RLLD + K+ TL E+ + RN + D+L V +H +Y DE
Sbjct: 585 AWQGVALLPFIDSERLLDAMAKVYPTLPEDVSARNGLGRDVLLVSEAH---HDLY--DEI 639
Query: 624 CKQLKIKERVEVKERLNPELSDGMNGYI 651
+ K++ +LNP++S+G+ G I
Sbjct: 640 TSKFYSKKQDAPHMKLNPKVSEGLTGRI 667
>gi|357111459|ref|XP_003557530.1| PREDICTED: 5'-3' exoribonuclease 4-like [Brachypodium distachyon]
Length = 992
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 222/328 (67%), Positives = 262/328 (79%), Gaps = 13/328 (3%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+KDAAD+AAEEERLR +FE EGR L K S+ DSNVITPGT+FM VL
Sbjct: 112 MNQQRSRRFRAAKDAADAAAEEERLRLDFEAEGRTLVQKQKSEAIDSNVITPGTQFMFVL 171
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S ALQYYI LRLN+ PGW+ +KV+LSD+NVPGEGEHKIMSY+RLQRNLPG+DPNTRHCLY
Sbjct: 172 SSALQYYIQLRLNHTPGWQSVKVMLSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLY 231
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML+LATHEVHFSILREV+ PGQ +KCFLCGQ GHLAA C G A
Sbjct: 232 GLDADLIMLSLATHEVHFSILREVITMPGQHEKCFLCGQVGHLAAECRGPA--------- 282
Query: 181 KGDEVV----VPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGND 236
+ D VV + KK YQFL+IW LREYL+ + I +PPF+I+ E IVDDF+F+CFFVGND
Sbjct: 283 QADNVVELPPIHKKKYQFLNIWVLREYLEKDLEIVDPPFKINFERIVDDFVFICFFVGND 342
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLPHMPTLEIREGA+NLLMA+Y+ EF+ +GGYLTDG + L RVEHFIQ+V +E++IF+
Sbjct: 343 FLPHMPTLEIREGALNLLMAIYRSEFKPMGGYLTDGGEVLLERVEHFIQSVAVHEEQIFR 402
Query: 297 KRARLHQRHAERIKREKAQARRGDDVEP 324
KRAR+ Q + +R K Q +DV P
Sbjct: 403 KRARIQQAYENNEERRKGQRENSEDVNP 430
Score = 381 bits (978), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/374 (52%), Positives = 246/374 (65%), Gaps = 11/374 (2%)
Query: 413 RDKSDAFNSD--NPEEDKVKLGEPGWKERYYEEKFNAKTPEE-REETRKDVVLRYTEGLC 469
R K NS+ NP D VKLGEPG++ERYY EKF + + ++ ++DVV +Y EGLC
Sbjct: 417 RRKGQRENSEDVNPYVDMVKLGEPGYRERYYAEKFREEAESKPIDQVQRDVVQKYVEGLC 476
Query: 470 WVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSH 529
WVM YYY+GVCSWQWFYPYHYAPFASDLK L +F I+F LG PFKPF+QL+G P+ASS+
Sbjct: 477 WVMRYYYQGVCSWQWFYPYHYAPFASDLKGLTEFEITFFLGQPFKPFDQLMGTLPAASSN 536
Query: 530 ALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHT 589
ALP++Y LMTDPNSP+ FYP DFE+DMNGKR++WQGIAKLPFIDE RLL E +K+E +
Sbjct: 537 ALPKYYGDLMTDPNSPLKYFYPKDFEIDMNGKRFAWQGIAKLPFIDERRLLAETQKVEDS 596
Query: 590 LTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNG 649
LTEEE RN M D+++V +HPL+A I L + C Q + + ++P S GMNG
Sbjct: 597 LTEEERFRNRTMFDIIYVRETHPLAAQIAFLYQMCTQPSTTDPSYLIP-IDPAASGGMNG 655
Query: 650 YISPCAGDPHPPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLE 709
++ + + SPV I N+VL + Y P HKH+ PP GVI P KI++
Sbjct: 656 FLCLSQRNWYSISVGSPVKGFNGITHNRVLNSTYLNPQYHKHIPEPPEGVIIPPKILKPY 715
Query: 710 DLKPAPVLWHEDSGRRPHENGRHNPHGTISGRQLGEAAHRLVANSLQHMKVDRNGYGDRM 769
D KP PVLWHED+ RR R HG +SG LGEAAHRLV NSLQ G D
Sbjct: 716 DFKPFPVLWHEDNSRR-QTRDRPQVHGALSGSVLGEAAHRLVKNSLQIKSGSSAGLLD-- 772
Query: 770 HGSPLPYAAAPYVP 783
+PY APY P
Sbjct: 773 ----MPYRGAPYGP 782
>gi|125588231|gb|EAZ28895.1| hypothetical protein OsJ_12935 [Oryza sativa Japonica Group]
Length = 997
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 218/321 (67%), Positives = 260/321 (80%), Gaps = 5/321 (1%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+KDAAD+AAEEERLR+EFE EGR L K S+ DSNVITPGT FM VL
Sbjct: 112 MNQQRSRRFRAAKDAADAAAEEERLRKEFEAEGRTLVAKEKSEAIDSNVITPGTPFMFVL 171
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S ALQYYI LRLN+ PGW+ +KV+LSD+NVPGEGEHKIMSY+RLQRNLPG+DPNTRHCLY
Sbjct: 172 SSALQYYIQLRLNHTPGWQSVKVMLSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLY 231
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML+LATHEVHFSILREV+ PGQ +KCFLCGQ GHLAA C G +G+ D+
Sbjct: 232 GLDADLIMLSLATHEVHFSILREVITMPGQHEKCFLCGQVGHLAAECRG-----SGQADK 286
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
+ + KK YQFL+IW LREYL+ + I +PPF+I+ E +VDDF+FMCFFVGNDFLPH
Sbjct: 287 TVELPPIHKKKYQFLNIWVLREYLEKDLEIVDPPFKINFERVVDDFVFMCFFVGNDFLPH 346
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
MPTLEIREGAINLLM +Y++EF ++GGYLTDG + L RVEHFIQ+V +E++IFQKRAR
Sbjct: 347 MPTLEIREGAINLLMNIYRREFTSMGGYLTDGGEVLLDRVEHFIQSVAVHEEQIFQKRAR 406
Query: 301 LHQRHAERIKREKAQARRGDD 321
+ + +R + Q +D
Sbjct: 407 IQKAIQNNEERNRVQTENSED 427
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/439 (47%), Positives = 261/439 (59%), Gaps = 40/439 (9%)
Query: 429 VKLGEPGWKERYYEEKFNAKTP-EEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYP 487
VKLGEPG++ RYY EKF + + ++ ++DVV +Y EGLCWVM YYY+GVCSWQWFYP
Sbjct: 443 VKLGEPGYRVRYYAEKFKEEAELKPIDQVQRDVVQKYVEGLCWVMRYYYQGVCSWQWFYP 502
Query: 488 YHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPIS 547
YHYAPFASDLK L + I+F LG PFKPF+QL+G P+ASS+ALP++Y LM DPNSP+
Sbjct: 503 YHYAPFASDLKCLAELEITFFLGQPFKPFDQLMGTLPAASSNALPKYYGDLMNDPNSPLK 562
Query: 548 DFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
FYP DFE+DMNGKR++WQGIAKLPFIDE RLL E +K+E TLT+EE RN M D+L+V
Sbjct: 563 SFYPKDFEIDMNGKRFAWQGIAKLPFIDERRLLAETQKLEETLTDEERFRNRTMFDILYV 622
Query: 608 LLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSPV 667
+HPL+A I L + C Q ++P S GMNG++ + + V SPV
Sbjct: 623 RETHPLAAQIAFLYQMCSQ---SPNASYIIPIDPAASGGMNGFLCLSERNCYSIVVTSPV 679
Query: 668 ASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKPAPVLWHEDSGRR-P 726
I N+VL A Y P HKH+ PP GVI P KI++ D KP P+LWHED+ RR P
Sbjct: 680 KGFNGIAQNRVLNATYLNPQYHKHIPEPPEGVIIPAKILKPSDFKPFPILWHEDNSRRQP 739
Query: 727 HENGRHNPHGTISGRQLGEAAHRLVANSLQHMKVDRNGYGDRMHGSPLPYAAAPY----- 781
E R G +SG LGEAAHRLV NSLQ ++GY + +PY APY
Sbjct: 740 RE--RPQVSGALSGSVLGEAAHRLVKNSLQ----IKSGYSAGLLD--MPYRGAPYGPGNR 791
Query: 782 -VPPVPSYQEYGVYDQGYNRFSQPRTDSYPAGHSQSSISAAQPPYDGGYSQHYASNTSHH 840
P P E G + YN GH S+ + P Q + ++
Sbjct: 792 PRPAGPLGYERGFVENSYN------------GHMSRSVPNSHP-------QFFGDAQANR 832
Query: 841 PNRRY--HPQYDRNSSGEH 857
N R P Y N S H
Sbjct: 833 QNVRILERPNYRNNDSAIH 851
>gi|115455883|ref|NP_001051542.1| Os03g0794800 [Oryza sativa Japonica Group]
gi|50400038|gb|AAT76426.1| putative 5'-3' exonuclease [Oryza sativa Japonica Group]
gi|108711531|gb|ABF99326.1| 5'-3' exoribonuclease, putative, expressed [Oryza sativa Japonica
Group]
gi|113550013|dbj|BAF13456.1| Os03g0794800 [Oryza sativa Japonica Group]
Length = 988
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 218/321 (67%), Positives = 260/321 (80%), Gaps = 5/321 (1%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+KDAAD+AAEEERLR+EFE EGR L K S+ DSNVITPGT FM VL
Sbjct: 112 MNQQRSRRFRAAKDAADAAAEEERLRKEFEAEGRTLVAKEKSEAIDSNVITPGTPFMFVL 171
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S ALQYYI LRLN+ PGW+ +KV+LSD+NVPGEGEHKIMSY+RLQRNLPG+DPNTRHCLY
Sbjct: 172 SSALQYYIQLRLNHTPGWQSVKVMLSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLY 231
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML+LATHEVHFSILREV+ PGQ +KCFLCGQ GHLAA C G +G+ D+
Sbjct: 232 GLDADLIMLSLATHEVHFSILREVITMPGQHEKCFLCGQVGHLAAECRG-----SGQADK 286
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
+ + KK YQFL+IW LREYL+ + I +PPF+I+ E +VDDF+FMCFFVGNDFLPH
Sbjct: 287 TVELPPIHKKKYQFLNIWVLREYLEKDLEIVDPPFKINFERVVDDFVFMCFFVGNDFLPH 346
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
MPTLEIREGAINLLM +Y++EF ++GGYLTDG + L RVEHFIQ+V +E++IFQKRAR
Sbjct: 347 MPTLEIREGAINLLMNIYRREFTSMGGYLTDGGEVLLDRVEHFIQSVAVHEEQIFQKRAR 406
Query: 301 LHQRHAERIKREKAQARRGDD 321
+ + +R + Q +D
Sbjct: 407 IQKAIQNNEERNRVQTENSED 427
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 215/456 (47%), Positives = 270/456 (59%), Gaps = 41/456 (8%)
Query: 413 RDKSDAFNS-DNPEEDKVKLGEPGWKERYYEEKFNAKTP-EEREETRKDVVLRYTEGLCW 470
R++ NS DN DKVKLGEPG++ RYY EKF + + ++ ++DVV +Y EGLCW
Sbjct: 417 RNRVQTENSEDNQYVDKVKLGEPGYRVRYYAEKFKEEAELKPIDQVQRDVVQKYVEGLCW 476
Query: 471 VMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHA 530
VM YYY+GVCSWQWFYPYHYAPFASDLK L + I+F LG PFKPF+QL+G P+ASS+A
Sbjct: 477 VMRYYYQGVCSWQWFYPYHYAPFASDLKCLAELEITFFLGQPFKPFDQLMGTLPAASSNA 536
Query: 531 LPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTL 590
LP++Y LM DPNSP+ FYP DFE+DMNGKR++WQGIAKLPFIDE RLL E +K+E TL
Sbjct: 537 LPKYYGDLMNDPNSPLKSFYPKDFEIDMNGKRFAWQGIAKLPFIDERRLLAETQKLEETL 596
Query: 591 TEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGY 650
T+EE RN M D+L+V +HPL+A I L + C Q ++P S GMNG+
Sbjct: 597 TDEERFRNRTMFDILYVRETHPLAAQIAFLYQMCSQ---SPNASYIIPIDPAASGGMNGF 653
Query: 651 ISPCAGDPHPPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLED 710
+ + + V SPV I N+VL A Y P HKH+ PP GVI P KI++ D
Sbjct: 654 LCLSERNCYSIVVTSPVKGFNGIAQNRVLNATYLNPQYHKHIPEPPEGVIIPAKILKPSD 713
Query: 711 LKPAPVLWHEDSGRR-PHENGRHNPHGTISGRQLGEAAHRLVANSLQHMKVDRNGYGDRM 769
KP P+LWHED+ RR P E R G +SG LGEAAHRLV NSLQ ++GY +
Sbjct: 714 FKPFPILWHEDNSRRQPRE--RPQVSGALSGSVLGEAAHRLVKNSLQ----IKSGYSAGL 767
Query: 770 HGSPLPYAAAPY------VPPVPSYQEYGVYDQGYNRFSQPRTDSYPAGHSQSSISAAQP 823
+PY APY P P E G + YN GH S+ + P
Sbjct: 768 LD--MPYRGAPYGPGNRPRPAGPLGYERGFVENSYN------------GHMSRSVPNSHP 813
Query: 824 PYDGGYSQHYASNTSHHPNRRY--HPQYDRNSSGEH 857
Q + ++ N R P Y N S H
Sbjct: 814 -------QFFGDAQANRQNVRILERPNYRNNDSAIH 842
>gi|125546024|gb|EAY92163.1| hypothetical protein OsI_13876 [Oryza sativa Indica Group]
Length = 997
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 218/321 (67%), Positives = 260/321 (80%), Gaps = 5/321 (1%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+KDAAD+AAEEERLR+EFE EGR L K S+ DSNVITPGT FM VL
Sbjct: 112 MNQQRSRRFRAAKDAADAAAEEERLRKEFEAEGRTLVAKEKSEAIDSNVITPGTPFMFVL 171
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S ALQYYI LRLN+ PGW+ +KV+LSD+NVPGEGEHKIMSY+RLQRNLPG+DPNTRHCLY
Sbjct: 172 SSALQYYIQLRLNHTPGWQSVKVMLSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLY 231
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML+LATHEVHFSILREV+ PGQ +KCFLCGQ GHLAA C G +G+ D+
Sbjct: 232 GLDADLIMLSLATHEVHFSILREVITMPGQHEKCFLCGQVGHLAAECRG-----SGQADK 286
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
+ + KK YQFL+IW LREYL+ + I +PPF+I+ E +VDDF+FMCFFVGNDFLPH
Sbjct: 287 TVELPPIHKKKYQFLNIWVLREYLEKDLEIVDPPFKINFERVVDDFVFMCFFVGNDFLPH 346
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
MPTLEIREGAINLLM +Y++EF ++GGYLTDG + L RVEHFIQ+V +E++IFQKRAR
Sbjct: 347 MPTLEIREGAINLLMNIYRREFTSMGGYLTDGGEVLLDRVEHFIQSVAVHEEQIFQKRAR 406
Query: 301 LHQRHAERIKREKAQARRGDD 321
+ + +R + Q +D
Sbjct: 407 IQKAIQNNEERNRVQTENSED 427
Score = 371 bits (953), Expect = e-99, Method: Compositional matrix adjust.
Identities = 207/439 (47%), Positives = 260/439 (59%), Gaps = 40/439 (9%)
Query: 429 VKLGEPGWKERYYEEKFNAKTP-EEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYP 487
VKLGEPG++ RYY EKF + + ++ ++DVV +Y EGLCWVM YYY+GVCSWQWFYP
Sbjct: 443 VKLGEPGYRVRYYAEKFKEEAELKPIDQVQRDVVQKYVEGLCWVMRYYYQGVCSWQWFYP 502
Query: 488 YHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPIS 547
YHYAPFASDLK L + I+F LG PFKPF+QL+G P+ASS+ALP++Y LM DPNSP+
Sbjct: 503 YHYAPFASDLKCLAELEITFFLGQPFKPFDQLMGTLPAASSNALPKYYGDLMNDPNSPLK 562
Query: 548 DFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
FYP DFE+DMNGKR++WQGIAKLPFIDE RLL E +K+E TLT+EE RN M D+L+V
Sbjct: 563 SFYPKDFEIDMNGKRFAWQGIAKLPFIDERRLLAETQKLEETLTDEERFRNRTMFDILYV 622
Query: 608 LLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSPV 667
+HPL+A I L + C Q ++P S GMNG++ + + SPV
Sbjct: 623 RETHPLAAQIAFLYQMCSQ---SPNASYIIPIDPAASGGMNGFLCLSERNCYSIAVTSPV 679
Query: 668 ASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKPAPVLWHEDSGRR-P 726
I N+VL A Y P HKH+ PP GVI P KI++ D KP P+LWHED+ RR P
Sbjct: 680 KGFNGIAQNRVLNATYLNPQYHKHIPEPPEGVIIPAKILKPSDFKPFPILWHEDNSRRQP 739
Query: 727 HENGRHNPHGTISGRQLGEAAHRLVANSLQHMKVDRNGYGDRMHGSPLPYAAAPY----- 781
E R G +SG LGEAAHRLV NSLQ ++GY + +PY APY
Sbjct: 740 RE--RPQVSGALSGSVLGEAAHRLVKNSLQ----IKSGYSAGLLD--MPYRGAPYGPGNR 791
Query: 782 -VPPVPSYQEYGVYDQGYNRFSQPRTDSYPAGHSQSSISAAQPPYDGGYSQHYASNTSHH 840
P P E G + YN GH S+ + P Q + ++
Sbjct: 792 PRPAGPLGYERGFVENSYN------------GHMSRSVPNSHP-------QFFGDAQANR 832
Query: 841 PNRRY--HPQYDRNSSGEH 857
N R P Y N S H
Sbjct: 833 QNVRILERPNYRNNDSAIH 851
>gi|406603016|emb|CCH45428.1| 5'-3' exoribonuclease 2 [Wickerhamomyces ciferrii]
Length = 940
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 257/649 (39%), Positives = 369/649 (56%), Gaps = 65/649 (10%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSD-SQVFDSNVITPGTEFMAV 59
MNQQR+RRFR+++DA E +RL+ E G + + +DSN ITPGT FM
Sbjct: 110 MNQQRARRFRSARDAKIQDEERQRLQDLREGYGEVIDEAVKVKKTWDSNAITPGTPFMDK 169
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
L++AL+Y+ +L++DPGW+ ++VI+SDA VPGEGEHKIM++VR QR+ Y+PNT+H +
Sbjct: 170 LALALRYWTAYKLSSDPGWKDLQVIISDATVPGEGEHKIMNFVRSQRSDIEYNPNTKHAI 229
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
YGLDADLI L LATHE HF +LRE VF + +K + +L+ + RK E
Sbjct: 230 YGLDADLIFLGLATHEPHFRVLREDVF--ARDNKMMSVQEKMNLS-----EEHRKLIEEK 282
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
E KKP+ +L+I LREYL+ E IP PF+ DLE +DD++FMCFF GNDFLP
Sbjct: 283 ES-------KKPFLWLNINVLREYLEIELNIPRLPFKFDLERAIDDWVFMCFFCGNDFLP 335
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+L++R+ +I+LL++++K+ + Y+T +L VE + + E IF++R
Sbjct: 336 HLPSLDVRDNSIDLLVSIWKQVLPKMKSYITCDGILNLENVEVLLSNLAPREADIFRQRQ 395
Query: 300 RLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPS---PSPYQQSEC 356
QR + KR K + +A+ L V++ + P P ++
Sbjct: 396 AQDQRRNDNDKRRKVWQEE----DKIAKNQYLANVTKGKADKGTYTPVNNLPLFDVNNQS 451
Query: 357 VGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEA--------------ENSFETDPQENKE 402
VG++ S + ++++G T A ++ E E Q N
Sbjct: 452 VGKV----HMSNKELAQAQINAGKTPDATTDDSSAKEESETPQPEVKEEDVENANQANIS 507
Query: 403 EFKAKLKELLRDKS--------------------DAFNSD----NPEEDKVKLGEPGWKE 438
A ++LL +K+ A +SD + + D V+L EPG+ +
Sbjct: 508 AAAALRQKLLANKTKKSEDATIGEKRQIPDSPTDSAVSSDSEAADVDGDPVRLFEPGYHD 567
Query: 439 RYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLK 498
RYY KF+ + EE E T K+VV Y EG+ WV+ YYY+G SW W+YPYHYAPFA D
Sbjct: 568 RYYRIKFHI-SDEEVEATSKEVVKHYIEGISWVLLYYYQGCPSWNWYYPYHYAPFAQDFT 626
Query: 499 DLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDM 558
++ +I F G PF P+ QL+ V P+AS H LPE +R LM+D +SPI DFYP DF +DM
Sbjct: 627 NIKDLDIKFTQGKPFLPYEQLMSVLPAASGHNLPEIFRPLMSDADSPIIDFYPEDFPIDM 686
Query: 559 NGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
NGK+ SWQGI LPFIDE RLL+ V+ LT+ E RN D++F+
Sbjct: 687 NGKKMSWQGIVLLPFIDEKRLLEVVRDQYPKLTDAEKGRNVRKEDVVFL 735
>gi|15221841|ref|NP_175851.1| 5'-3' exoribonuclease 4 [Arabidopsis thaliana]
gi|75262833|sp|Q9FQ04.1|XRN4_ARATH RecName: Full=5'-3' exoribonuclease 4; AltName: Full=Protein ACC
INSENSITIVE 1; AltName: Full=Protein ETHYLENE
INSENSITIVE 5; AltName: Full=Protein EXORIBONUCLEASE 4
gi|11875626|gb|AAG40731.1|AF286718_1 XRN4 [Arabidopsis thaliana]
gi|17381112|gb|AAL36368.1| putative exonuclease [Arabidopsis thaliana]
gi|20259665|gb|AAM14350.1| putative exonuclease [Arabidopsis thaliana]
gi|109627646|gb|ABG34298.1| At1g54490 [Arabidopsis thaliana]
gi|332194988|gb|AEE33109.1| 5'-3' exoribonuclease 4 [Arabidopsis thaliana]
Length = 947
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 217/324 (66%), Positives = 257/324 (79%), Gaps = 5/324 (1%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+KDAA++ AEEERLR++FE EG+ L K ++ DSNVITPGT FMA+L
Sbjct: 112 MNQQRSRRFRAAKDAAEAEAEEERLRKDFEMEGQILSAKEKAETCDSNVITPGTPFMAIL 171
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S+ALQYYI RLN++PGW +KVILSD+NVPGEGEHKIMSY+RLQRNLPG+DPNTRHCLY
Sbjct: 172 SVALQYYIQSRLNHNPGWRYVKVILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLY 231
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML+LATHEVHFSILREV+ PGQQ+KCF+CGQ GH A++C GK+ D
Sbjct: 232 GLDADLIMLSLATHEVHFSILREVITYPGQQEKCFVCGQTGHFASDCPGKSGSNNAAAD- 290
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
+ + KK YQFL+IW LREYL YE IP+PPF I+ E I+DDF+F+CFFVGNDFLPH
Sbjct: 291 ----IPIHKKKYQFLNIWVLREYLQYELAIPDPPFMINFERIIDDFVFLCFFVGNDFLPH 346
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
MPTLEIREGAINLLM VY+KEF A+GGYLTD + L RVEHFIQAV ED+IFQKR R
Sbjct: 347 MPTLEIREGAINLLMHVYRKEFTAMGGYLTDSGEVLLDRVEHFIQAVAVNEDKIFQKRTR 406
Query: 301 LHQRHAERIKREKAQARRGDDVEP 324
+ Q + ++ R +V P
Sbjct: 407 IKQSMDNNEEMKQRSRRDPSEVPP 430
Score = 365 bits (938), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 191/378 (50%), Positives = 243/378 (64%), Gaps = 18/378 (4%)
Query: 398 QENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETR 457
+N EE K + + RD S+ P +DK+KLGEPG+KERYY EKF+ PEE E+ +
Sbjct: 411 MDNNEEMKQRSR---RDPSEV--PPEPIDDKIKLGEPGYKERYYAEKFSTTNPEETEQIK 465
Query: 458 KDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFN 517
+D+VL+Y EGLCWV YYY+GVCSWQWFYPYHYAPFASDLK+L I+F +G PFKPF+
Sbjct: 466 QDMVLKYVEGLCWVCRYYYQGVCSWQWFYPYHYAPFASDLKNLPDLEITFFIGEPFKPFD 525
Query: 518 QLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEA 577
QL+G P+ASS+ALP YRKLMTDP+SPI FYP DFE+DMNGKR++WQGIAKLPFI+E
Sbjct: 526 QLMGTLPAASSNALPGEYRKLMTDPSSPILKFYPADFELDMNGKRFAWQGIAKLPFIEEK 585
Query: 578 RLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKE 637
LL +K+E TLT EE +RNS+M D+L+V +HPL I + + E +
Sbjct: 586 LLLAATRKLEETLTVEEQQRNSVMLDLLYVHPAHPLGQRILQYYHFYQHMPPHEC--LPW 643
Query: 638 RLNPELSDGMNGYISPCAGDPHPPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPA 697
++P S GMNG++ + SPV + I N+ L Y P H H++ PP
Sbjct: 644 MIDPNSSQGMNGFLWFSERNGFQTRVDSPVNGLPCIEQNRALNVTYLCPAKHSHISEPPR 703
Query: 698 GVIFPKKIVQLEDLKPAPVLWHED-SGRRPHENGRHNPHGTISGRQLGEAAHRLVANSLQ 756
G I P KI+ D+KP P LWHED S RR R G I+G LGEAAHRL+ N+L
Sbjct: 704 GAIIPDKILTSVDIKPFPPLWHEDNSNRRRQARDRPQVVGAIAGPSLGEAAHRLIKNTL- 762
Query: 757 HMK---------VDRNGY 765
+MK +D NGY
Sbjct: 763 NMKSSTGAASGLIDPNGY 780
>gi|356573066|ref|XP_003554686.1| PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max]
Length = 957
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 220/325 (67%), Positives = 253/325 (77%), Gaps = 8/325 (2%)
Query: 1 MNQQRSRRFRASKDAADSAAEE-----ERLRQEFEREGRKLPPKSDSQVFDSNVITPGTE 55
MNQQRSRRFRA+KDAA+ A E ERLR+EFE E + L K + +DSNVITPGT
Sbjct: 106 MNQQRSRRFRAAKDAAEKDAAEAEAEIERLREEFEGEMKLLSSKDKPETYDSNVITPGTP 165
Query: 56 FMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNT 115
FM VLS+ALQYYI RLN +PGW KVILSD+NVPGEGEHKIM Y+RLQRNLPG++PNT
Sbjct: 166 FMGVLSVALQYYIQTRLNYNPGWWNTKVILSDSNVPGEGEHKIMDYIRLQRNLPGFNPNT 225
Query: 116 RHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKA 175
RHCLYGLDADLIML+LATHEVHFSILREV+ PGQQ+KCF CGQ GH AA C GK KA
Sbjct: 226 RHCLYGLDADLIMLSLATHEVHFSILREVITFPGQQEKCFQCGQLGHFAAECRGKPGEKA 285
Query: 176 GEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGN 235
+++ D+ + KK YQFL+IW LREYL YE IPNPPFEID E IVDDF+F+CFFVGN
Sbjct: 286 EDWNPV-DDTPIHKKKYQFLNIWVLREYLQYEMEIPNPPFEIDFERIVDDFVFLCFFVGN 344
Query: 236 DFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 295
DFLPHMPTLEIREGA+NLLM +Y+KEF A+GGYLT+ + L RVEHFIQ+V +ED+IF
Sbjct: 345 DFLPHMPTLEIREGALNLLMHIYRKEFTAMGGYLTEAGEVFLERVEHFIQSVAVHEDQIF 404
Query: 296 QKRARLHQRHAERIKREKAQARRGD 320
QKR R+ Q A I E RGD
Sbjct: 405 QKRVRIQQ--ATEINEEMKARARGD 427
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/341 (55%), Positives = 241/341 (70%), Gaps = 6/341 (1%)
Query: 427 DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFY 486
DKVKLGEPG+KERYY EKF A PE+ ++ +KD VL+Y EGLCWV YYY+GVCSWQW+Y
Sbjct: 438 DKVKLGEPGYKERYYAEKFGALDPEKIDKIKKDTVLKYVEGLCWVCRYYYQGVCSWQWYY 497
Query: 487 PYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPI 546
PYHYAPFASDLKDL I+F LG PFKPF+QL+G P++SS ALP+ YR LM DP+S I
Sbjct: 498 PYHYAPFASDLKDLADLEITFFLGEPFKPFDQLMGTLPASSSSALPKKYRDLMIDPSSSI 557
Query: 547 SDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 606
FYP DFE+DMNGKR++WQG+AKLPFIDE +LL K+E TLTEEE RNS M D+L+
Sbjct: 558 LQFYPADFEIDMNGKRFAWQGVAKLPFIDEKKLLSATSKLEATLTEEEQLRNSKMLDLLY 617
Query: 607 VLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSP 666
V +H L+ I + ++ QL + ER + ++P +SDGMNGY+ + + SP
Sbjct: 618 VSSAHNLAPHILSYYQYSCQLPLHER--PAQPIDPRVSDGMNGYLWLYERNVLRTIVSSP 675
Query: 667 VASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKPAPVLWHED-SGRR 725
+ ++DI NQVL Y P H+H+ + P GV+ PKKI++ D+KP PVLWHE+ SGRR
Sbjct: 676 IKGLQDIEFNQVLNITYLNPRKHRHIPKAPDGVLMPKKILKAIDIKPFPVLWHEENSGRR 735
Query: 726 PHENGRHNPHGTISGRQLGEAAHRLVANSLQHMKVDRNGYG 766
+ HG ++G QLGEAAHRLV NSL ++K + YG
Sbjct: 736 --QGRERQVHGAMAGPQLGEAAHRLVKNSL-NIKSNNMPYG 773
>gi|50310793|ref|XP_455419.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74605300|sp|Q6CKX0.3|XRN2_KLULA RecName: Full=5'-3' exoribonuclease 2
gi|49644555|emb|CAG98127.1| KLLA0F07469p [Kluyveromyces lactis]
Length = 992
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 251/670 (37%), Positives = 360/670 (53%), Gaps = 77/670 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQ-VFDSNVITPGTEFMAV 59
MNQQR+RRFR+++DA E++ +E E G + S+ +DSN ITPGT FM
Sbjct: 110 MNQQRARRFRSARDAKLQNEAREQVLREREDYGETIDENVKSKKTWDSNAITPGTPFMDK 169
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
L+ AL+Y+ +L DPGW+ +++I+SDA VPGEGEHKIM+++R QR Y+PNT HC+
Sbjct: 170 LATALRYWTSFKLATDPGWKNLQIIISDATVPGEGEHKIMNFIRSQRADTQYNPNTTHCI 229
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
YGLDADLI L LATHE HF ILRE VF K +P + N + K++ + D
Sbjct: 230 YGLDADLIFLGLATHEPHFKILREDVFANNNYKK----PKPQDMI-NLSEEEKQQLIQQD 284
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
+ KP+ +LHI LREYL E IP+ F+ D E +DD++FMCFF GNDFLP
Sbjct: 285 SE--------KPFLWLHISVLREYLSAELAIPHLSFQFDFERAIDDWVFMCFFCGNDFLP 336
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR- 298
H+P L++RE +I++L+ ++K YLT +L VE ++ +G E +F+K+
Sbjct: 337 HLPCLDVRENSIDILVDIWKTVLPKTKTYLTCDGTLNLEPVEALLEQLGDRETDLFKKKY 396
Query: 299 ---ARLHQRHAERIK-REKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQS 354
R + H R K + +G P +PV G+ + S +
Sbjct: 397 IQEVRKQEAHDRRKKLKSNPNVSQGKVDRNFMIPLENMPVYDVDGNAAEGSLNLSNKDFA 456
Query: 355 EC---VGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQEN-------KEEF 404
+ + G G + + K+ + + + E +NS + N +E+
Sbjct: 457 NMRKEINLANEGDGEAAKALKLKSEKNSGVVEFSSEELKNSVQLSKTANYDAATSLQEKL 516
Query: 405 KAKLKEL----------LRDKSDAFNSDNPE----------------------------- 425
AK + L+ KS+ +S E
Sbjct: 517 IAKKMAMRDEENAEELSLKRKSEDVDSAEKETSNEPEDDEADYDEDEGSTVPPAVIHTGI 576
Query: 426 --------EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYE 477
++ V+L EPG+ +RYY+ KF+ ++ +KDV+ Y EG+ WV+ YYY+
Sbjct: 577 VKSGFIDTDESVRLYEPGYHDRYYQHKFHVPA-KDIPALQKDVIRCYVEGISWVLLYYYQ 635
Query: 478 GVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRK 537
G SW W+YPYHYAPFA D K++ +I F+LG PF P+ QL+ V P+AS HALPE +R
Sbjct: 636 GCASWTWYYPYHYAPFAQDFKNIKNLDIHFDLGEPFLPYEQLMSVLPAASGHALPEIFRP 695
Query: 538 LMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARR 597
LM+DPNS I DFYP +F VDMNGK+ +WQGIA LPFIDE RLL V++ L++ E R
Sbjct: 696 LMSDPNSEIIDFYPEEFPVDMNGKKMAWQGIALLPFIDETRLLKTVREQYSKLSDSEKAR 755
Query: 598 NSIMADMLFV 607
N D L +
Sbjct: 756 NVRKKDALLI 765
>gi|108711532|gb|ABF99327.1| 5'-3' exoribonuclease, putative, expressed [Oryza sativa Japonica
Group]
Length = 682
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 218/321 (67%), Positives = 260/321 (80%), Gaps = 5/321 (1%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+KDAAD+AAEEERLR+EFE EGR L K S+ DSNVITPGT FM VL
Sbjct: 112 MNQQRSRRFRAAKDAADAAAEEERLRKEFEAEGRTLVAKEKSEAIDSNVITPGTPFMFVL 171
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S ALQYYI LRLN+ PGW+ +KV+LSD+NVPGEGEHKIMSY+RLQRNLPG+DPNTRHCLY
Sbjct: 172 SSALQYYIQLRLNHTPGWQSVKVMLSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLY 231
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML+LATHEVHFSILREV+ PGQ +KCFLCGQ GHLAA C G +G+ D+
Sbjct: 232 GLDADLIMLSLATHEVHFSILREVITMPGQHEKCFLCGQVGHLAAECRG-----SGQADK 286
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
+ + KK YQFL+IW LREYL+ + I +PPF+I+ E +VDDF+FMCFFVGNDFLPH
Sbjct: 287 TVELPPIHKKKYQFLNIWVLREYLEKDLEIVDPPFKINFERVVDDFVFMCFFVGNDFLPH 346
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
MPTLEIREGAINLLM +Y++EF ++GGYLTDG + L RVEHFIQ+V +E++IFQKRAR
Sbjct: 347 MPTLEIREGAINLLMNIYRREFTSMGGYLTDGGEVLLDRVEHFIQSVAVHEEQIFQKRAR 406
Query: 301 LHQRHAERIKREKAQARRGDD 321
+ + +R + Q +D
Sbjct: 407 IQKAIQNNEERNRVQTENSED 427
Score = 295 bits (754), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 146/269 (54%), Positives = 185/269 (68%), Gaps = 5/269 (1%)
Query: 413 RDKSDAFNS-DNPEEDKVKLGEPGWKERYYEEKFNAKTPEE-REETRKDVVLRYTEGLCW 470
R++ NS DN DKVKLGEPG++ RYY EKF + + ++ ++DVV +Y EGLCW
Sbjct: 417 RNRVQTENSEDNQYVDKVKLGEPGYRVRYYAEKFKEEAELKPIDQVQRDVVQKYVEGLCW 476
Query: 471 VMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHA 530
VM YYY+GVCSWQWFYPYHYAPFASDLK L + I+F LG PFKPF+QL+G P+ASS+A
Sbjct: 477 VMRYYYQGVCSWQWFYPYHYAPFASDLKCLAELEITFFLGQPFKPFDQLMGTLPAASSNA 536
Query: 531 LPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTL 590
LP++Y LM DPNSP+ FYP DFE+DMNGKR++WQGIAKLPFIDE RLL E +K+E TL
Sbjct: 537 LPKYYGDLMNDPNSPLKSFYPKDFEIDMNGKRFAWQGIAKLPFIDERRLLAETQKLEETL 596
Query: 591 TEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGY 650
T+EE RN M D+L+V +HPL+A I L + C Q ++P S GMNG+
Sbjct: 597 TDEERFRNRTMFDILYVRETHPLAAQIAFLYQMCSQ---SPNASYIIPIDPAASGGMNGF 653
Query: 651 ISPCAGDPHPPVFRSPVASMEDIMGNQVL 679
+ + + V SPV I N+VL
Sbjct: 654 LCLSERNCYSIVVTSPVKGFNGIAQNRVL 682
>gi|108711533|gb|ABF99328.1| 5'-3' exoribonuclease, putative, expressed [Oryza sativa Japonica
Group]
Length = 718
Score = 434 bits (1117), Expect = e-118, Method: Compositional matrix adjust.
Identities = 218/321 (67%), Positives = 260/321 (80%), Gaps = 5/321 (1%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+KDAAD+AAEEERLR+EFE EGR L K S+ DSNVITPGT FM VL
Sbjct: 112 MNQQRSRRFRAAKDAADAAAEEERLRKEFEAEGRTLVAKEKSEAIDSNVITPGTPFMFVL 171
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S ALQYYI LRLN+ PGW+ +KV+LSD+NVPGEGEHKIMSY+RLQRNLPG+DPNTRHCLY
Sbjct: 172 SSALQYYIQLRLNHTPGWQSVKVMLSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLY 231
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML+LATHEVHFSILREV+ PGQ +KCFLCGQ GHLAA C G +G+ D+
Sbjct: 232 GLDADLIMLSLATHEVHFSILREVITMPGQHEKCFLCGQVGHLAAECRG-----SGQADK 286
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
+ + KK YQFL+IW LREYL+ + I +PPF+I+ E +VDDF+FMCFFVGNDFLPH
Sbjct: 287 TVELPPIHKKKYQFLNIWVLREYLEKDLEIVDPPFKINFERVVDDFVFMCFFVGNDFLPH 346
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
MPTLEIREGAINLLM +Y++EF ++GGYLTDG + L RVEHFIQ+V +E++IFQKRAR
Sbjct: 347 MPTLEIREGAINLLMNIYRREFTSMGGYLTDGGEVLLDRVEHFIQSVAVHEEQIFQKRAR 406
Query: 301 LHQRHAERIKREKAQARRGDD 321
+ + +R + Q +D
Sbjct: 407 IQKAIQNNEERNRVQTENSED 427
Score = 320 bits (819), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 159/295 (53%), Positives = 200/295 (67%), Gaps = 5/295 (1%)
Query: 413 RDKSDAFNS-DNPEEDKVKLGEPGWKERYYEEKFNAKTP-EEREETRKDVVLRYTEGLCW 470
R++ NS DN DKVKLGEPG++ RYY EKF + + ++ ++DVV +Y EGLCW
Sbjct: 417 RNRVQTENSEDNQYVDKVKLGEPGYRVRYYAEKFKEEAELKPIDQVQRDVVQKYVEGLCW 476
Query: 471 VMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHA 530
VM YYY+GVCSWQWFYPYHYAPFASDLK L + I+F LG PFKPF+QL+G P+ASS+A
Sbjct: 477 VMRYYYQGVCSWQWFYPYHYAPFASDLKCLAELEITFFLGQPFKPFDQLMGTLPAASSNA 536
Query: 531 LPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTL 590
LP++Y LM DPNSP+ FYP DFE+DMNGKR++WQGIAKLPFIDE RLL E +K+E TL
Sbjct: 537 LPKYYGDLMNDPNSPLKSFYPKDFEIDMNGKRFAWQGIAKLPFIDERRLLAETQKLEETL 596
Query: 591 TEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGY 650
T+EE RN M D+L+V +HPL+A I L + C Q ++P S GMNG+
Sbjct: 597 TDEERFRNRTMFDILYVRETHPLAAQIAFLYQMCSQ---SPNASYIIPIDPAASGGMNGF 653
Query: 651 ISPCAGDPHPPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKI 705
+ + + V SPV I N+VL A Y P HKH+ PP GVI P K+
Sbjct: 654 LCLSERNCYSIVVTSPVKGFNGIAQNRVLNATYLNPQYHKHIPEPPEGVIIPAKV 708
>gi|4585991|gb|AAD25627.1|AC005287_29 Dhm1- and Dhm2-like protein [Arabidopsis thaliana]
Length = 965
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 214/308 (69%), Positives = 253/308 (82%), Gaps = 7/308 (2%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+KDAA++ AEEERLR++FE EG+ L K ++ DSNVITPGT FMA+L
Sbjct: 112 MNQQRSRRFRAAKDAAEAEAEEERLRKDFEMEGQILSAKEKAETCDSNVITPGTPFMAIL 171
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S+ALQYYI RLN++PGW +KVILSD+NVPGEGEHKIMSY+RLQRNLPG+DPNTRHCLY
Sbjct: 172 SVALQYYIQSRLNHNPGWRYVKVILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLY 231
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML+LATHEVHFSILREV+ PGQQ+KCF+CGQ GH A++C GK+ D
Sbjct: 232 GLDADLIMLSLATHEVHFSILREVITYPGQQEKCFVCGQTGHFASDCPGKSGSNNAAAD- 290
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
+ + KK YQFL+IW LREYL YE IP+PPF I+ E I+DDF+F+CFFVGNDFLPH
Sbjct: 291 ----IPIHKKKYQFLNIWVLREYLQYELAIPDPPFMINFERIIDDFVFLCFFVGNDFLPH 346
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
MPTLEIREGAINLLM VY+KEF A+GGYLTD + + RVEHFIQAV ED+IFQKR R
Sbjct: 347 MPTLEIREGAINLLMHVYRKEFTAMGGYLTDSGE--VNRVEHFIQAVAVNEDKIFQKRTR 404
Query: 301 LHQRHAER 308
+ Q+ + R
Sbjct: 405 IKQQRSRR 412
Score = 353 bits (906), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 187/381 (49%), Positives = 235/381 (61%), Gaps = 42/381 (11%)
Query: 424 PEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQ 483
P +DK+KLGEPG+KERYY EKF+ PEE E+ ++D+VL+Y EGLCWV YYY+GVCSWQ
Sbjct: 421 PIDDKIKLGEPGYKERYYAEKFSTTNPEETEQIKQDMVLKYVEGLCWVCRYYYQGVCSWQ 480
Query: 484 WFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPN 543
WFYPYHYAPFASDLK+L I+F +G PFKPF+QL+G P+ASS+ALP YRKLMTDP+
Sbjct: 481 WFYPYHYAPFASDLKNLPDLEITFFIGEPFKPFDQLMGTLPAASSNALPGEYRKLMTDPS 540
Query: 544 SPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMAD 603
SPI FYP DFE+DMNGKR++WQGIAKLPFI+E LL +K+E TLT EE +RNS+M D
Sbjct: 541 SPILKFYPADFELDMNGKRFAWQGIAKLPFIEEKLLLAATRKLEETLTVEEQQRNSVMLD 600
Query: 604 MLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVF 663
+L+V +HPL I + + E + ++P S GMNG++ +
Sbjct: 601 LLYVHPAHPLGQRILQYYHFYQHMPPHEC--LPWMIDPNSSQGMNGFLWFSERNGFQTRV 658
Query: 664 RSPVASMEDIMGNQVLCA---------------IYKL--------------PDAHKHVTR 694
SPV + I N+ LC IY L P H H++
Sbjct: 659 DSPVNGLPCIEQNRALCVSCTSQVSVHEIDEVLIYSLIFSSTFSRNVTYLCPAKHSHISE 718
Query: 695 PPAGVIFPKKIVQLEDLKPAPVLWHED-SGRRPHENGRHNPHGTISGRQLGEAAHRLVAN 753
PP G I P KI+ D+KP P LWHED S RR R G I+G LGEAAHRL+ N
Sbjct: 719 PPRGAIIPDKILTSVDIKPFPPLWHEDNSNRRRQARDRPQVVGAIAGPSLGEAAHRLIKN 778
Query: 754 SLQHMK---------VDRNGY 765
+L +MK +D NGY
Sbjct: 779 TL-NMKSSTGAASGLIDPNGY 798
>gi|156034478|ref|XP_001585658.1| hypothetical protein SS1G_13542 [Sclerotinia sclerotiorum 1980]
gi|154698945|gb|EDN98683.1| hypothetical protein SS1G_13542 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 931
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 272/769 (35%), Positives = 393/769 (51%), Gaps = 124/769 (16%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+++A + A ++ L + + +G + + +DSN ITPGT FM +L
Sbjct: 111 MNQQRSRRFRAAQEAKEKAEDKAELLKMLKSQGTQAEETEVKKAWDSNEITPGTPFMDIL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ +L+Y+I +LN DP W K+KVI+SD+ VPGEGEHKIM +VR QR+ P +DPNTRH +Y
Sbjct: 171 AASLRYWIAYKLNTDPAWAKMKVIISDSTVPGEGEHKIMEFVRSQRSSPDHDPNTRHVMY 230
Query: 121 GLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADLIML LATHE HF ILRE V F G+ C LCGQ GH A C+G K K GEFD
Sbjct: 231 GLDADLIMLGLATHEPHFRILREDVFFNDGKPRTCKLCGQHGHEARECKGMYKIKDGEFD 290
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
EK + KP+ +LH+ LREYL E
Sbjct: 291 EKASAPTL--KPFIWLHVSILREYLAAEI------------------------------- 317
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
LEIRE IN L+A+++ +GGYLT L R + + + ED IF++R
Sbjct: 318 ----LEIREDGINTLIAIWRDNIPYMGGYLTKDGHVDLERAQFILDGLAKQEDAIFRRRR 373
Query: 300 RLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGR 359
+ + ++ K + R R G+ + SPS +Q
Sbjct: 374 KAEENFQKKRKLNNERNER---------------YGRGRGNNAGAQDSPSNGRQPP---- 414
Query: 360 LDNGKGTSGRPHKVPRLS-----------------------SGATIGAAIVEAENSFETD 396
G +G P P ++ + + AA+ E N TD
Sbjct: 415 --GGAAPTGLPLFTPGMANKEAKAISHDMVMNRGAAYKASIANKSAAAALKEMMNGKSTD 472
Query: 397 -----PQENKEEFKAKLKELLRDKSDAFNSDNPEE-----------------------DK 428
P+ + + L + K++ D+ D
Sbjct: 473 DDNGEPRADDTSAELPATALGKRKAELIEDDDSSTPGRNSPIPGTPGTPTTPGDDLPPDT 532
Query: 429 VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPY 488
V+L E G+ +RYYE+KFN + P++ E R V Y EGL WV+ YY++G SW W+YPY
Sbjct: 533 VRLWEDGYADRYYEQKFN-RDPKDI-EFRHQVGKAYVEGLAWVLLYYFQGCPSWDWYYPY 590
Query: 489 HYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISD 548
HYAPFA+D +L I+F+ G F+PF QL+GV P+AS A+PE + LMT+ +S I D
Sbjct: 591 HYAPFAADFANLKDMKINFQKGRIFRPFEQLMGVLPAASRQAIPEQFHHLMTNEDSEIID 650
Query: 549 FYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVL 608
FYP DF VD+NGK+++WQG+A LPFID RLLD + K+ TL + + RN + D+L V
Sbjct: 651 FYPEDFIVDLNGKKFAWQGVALLPFIDSERLLDAMAKVYPTLPVDVSARNGLGKDVLLVS 710
Query: 609 LSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPP----VFR 664
SH ++Y DE + K++ +LNP++S+G+ G + + + P VF
Sbjct: 711 ESH---HALY--DEITSKFYSKKQGSPHMKLNPKVSEGLTGRVE--KNEDYLPYSSLVFP 763
Query: 665 SPVASMEDIMGNQVLCAIYKLPDA-HKHVTRPPAGVIFPKKIVQLEDLK 712
+M + ++ + Y++P + H H + GV F + + D++
Sbjct: 764 LESGAMPGLDEDRSIRVHYEMPKSNHIHKSMLLVGVDFGQPALNQSDIE 812
>gi|356505926|ref|XP_003521740.1| PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max]
Length = 960
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 218/325 (67%), Positives = 252/325 (77%), Gaps = 8/325 (2%)
Query: 1 MNQQRSRRFRASKDAADSAAEE-----ERLRQEFEREGRKLPPKSDSQVFDSNVITPGTE 55
MNQQRSRRFRA+KDAA+ A E ERLR+EFE E + L K + +DSNVITPGT
Sbjct: 108 MNQQRSRRFRAAKDAAEKDAAEAEAEIERLREEFEGEMKLLSSKVKPETYDSNVITPGTP 167
Query: 56 FMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNT 115
FM VLS+ALQYYI RLN +PGW KVILSD+NVPGEGEHKIM Y+RLQRNLPG++PNT
Sbjct: 168 FMGVLSVALQYYIQTRLNYNPGWRNTKVILSDSNVPGEGEHKIMDYIRLQRNLPGFNPNT 227
Query: 116 RHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKA 175
RHCLYGLDADLIML+LATHEVHFSILREV+ PGQQ+KCF CGQ GH AA C GK KA
Sbjct: 228 RHCLYGLDADLIMLSLATHEVHFSILREVITFPGQQEKCFQCGQVGHFAAECRGKPGEKA 287
Query: 176 GEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGN 235
+++ D+ + KK YQFL+IW LREYL YE IPNPPFEID E IVDDF+F+CFFVGN
Sbjct: 288 EDWNPV-DDTPIHKKKYQFLNIWVLREYLQYEMEIPNPPFEIDFERIVDDFVFLCFFVGN 346
Query: 236 DFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 295
DFLPHMPTLEIREGA+NLLM +Y+KEF A+GGYLT+ + L RVEHFIQ+V +ED+IF
Sbjct: 347 DFLPHMPTLEIREGAVNLLMHIYRKEFTAMGGYLTEAGEVFLERVEHFIQSVAVHEDQIF 406
Query: 296 QKRARLHQRHAERIKREKAQARRGD 320
KR R+ Q A I E RG+
Sbjct: 407 LKRVRIQQ--ATEINEEMKARARGE 429
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 190/340 (55%), Positives = 238/340 (70%), Gaps = 3/340 (0%)
Query: 427 DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFY 486
DKVKLGEPG+KERYY EKF A E+ E+ +KD VL+Y EGLCWV YYY+GVCSWQW+Y
Sbjct: 440 DKVKLGEPGYKERYYAEKFGALDLEKIEKIKKDTVLKYVEGLCWVCRYYYQGVCSWQWYY 499
Query: 487 PYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPI 546
PYHYAPFASDLKDL I+F LG PFKPF+QL+G P++SS ALPE YR LM DP+SPI
Sbjct: 500 PYHYAPFASDLKDLADLEITFFLGEPFKPFDQLMGTLPASSSSALPEKYRDLMIDPSSPI 559
Query: 547 SDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 606
FYP DFE+DMNGKR++WQG+AKLPFIDE +LL K+E TLTEEE RNS M D+L+
Sbjct: 560 LQFYPADFEIDMNGKRFAWQGVAKLPFIDEKKLLSATSKLEATLTEEEQLRNSKMLDLLY 619
Query: 607 VLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSP 666
V +H L+ I + ++ QL + ER + ++P SDGMNGY+ + SP
Sbjct: 620 VSSAHNLAPHILSYHQYSCQLPLHERPALP--IDPRASDGMNGYLWLYERNVLRTTVSSP 677
Query: 667 VASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKPAPVLWHEDSGRRP 726
+ ++DI NQVL Y P H+H+ +PP GV+ PKKI++ D+KP PVLWHED+ R
Sbjct: 678 IKGLQDIEFNQVLNITYLNPRKHRHIPKPPDGVLMPKKILKAIDIKPFPVLWHEDNSGRR 737
Query: 727 HENGRHNPHGTISGRQLGEAAHRLVANSLQHMKVDRNGYG 766
R HG ++G QLGEAAHRLV NSL ++K + YG
Sbjct: 738 QGRERQQVHGAMAGPQLGEAAHRLVKNSL-NIKSNNMPYG 776
>gi|357441511|ref|XP_003591033.1| 5'-3' exoribonuclease [Medicago truncatula]
gi|355480081|gb|AES61284.1| 5'-3' exoribonuclease [Medicago truncatula]
Length = 1029
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 221/326 (67%), Positives = 260/326 (79%), Gaps = 3/326 (0%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+KDAA++ AEEERLR+EF EG L K + DSNVITPGT+FMA L
Sbjct: 106 MNQQRSRRFRAAKDAAEAEAEEERLRKEFVEEGALLSSKDKPETSDSNVITPGTKFMASL 165
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S+ALQYY+ RLN++P W+ IKVILSD+NVPGEGEHKIM Y+RLQRN+PG++PNTRHCLY
Sbjct: 166 SVALQYYVQTRLNHNPAWKNIKVILSDSNVPGEGEHKIMEYIRLQRNIPGFNPNTRHCLY 225
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML+LATHEVHFSILREV+ PG QDKCF+CGQ GH AA+C GK + KA E
Sbjct: 226 GLDADLIMLSLATHEVHFSILREVITLPG-QDKCFVCGQAGHFAADCHGKPETKA-EDGN 283
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
DE+ + KK YQFL+IW LREYL YE IPNPPFEID E +VDDF+F+CFFVGNDFLPH
Sbjct: 284 PADEIPIHKKKYQFLNIWVLREYLQYELEIPNPPFEIDFERVVDDFVFLCFFVGNDFLPH 343
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
MPTLEIREGAINLLM +Y+KEF A+GGYLT + L RVE+FIQ+V +ED+IFQKR R
Sbjct: 344 MPTLEIREGAINLLMHIYRKEFTAMGGYLTYAGEVFLDRVEYFIQSVAVHEDQIFQKRVR 403
Query: 301 LHQRHAERIKREKAQARRGDDVEPLA 326
+ Q AE + +A+ R EP A
Sbjct: 404 VQQV-AENNEEMRARVRGVILQEPRA 428
Score = 355 bits (911), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 225/527 (42%), Positives = 300/527 (56%), Gaps = 46/527 (8%)
Query: 399 ENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRK 458
EN EE +A+++ ++ + A SD KVKLGEPG+KERYY EKF A + EE ++ +K
Sbjct: 409 ENNEEMRARVRGVILQEPRASFSD-----KVKLGEPGYKERYYAEKFGASSLEEIDKVKK 463
Query: 459 DVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQ 518
D+VL+Y EGLCWV YYY GVCSW+W+YPYHYAPFASDLKDL I F G PFKPF+Q
Sbjct: 464 DIVLKYVEGLCWVCQYYYNGVCSWKWYYPYHYAPFASDLKDLPNLEIIFSPGEPFKPFDQ 523
Query: 519 LLGVFP-----------SASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQG 567
L+GV P S S+ALP+ YR LMTDP+SPI FYP DFE+DMNGKR++WQG
Sbjct: 524 LMGVLPASRFFLYHVLRSILSNALPDKYRDLMTDPSSPIFHFYPADFEIDMNGKRFAWQG 583
Query: 568 IAKLPFIDEARLLDEVKKIEHTLT--EEEARRNSIMADMLFVLLSHPLSASIYTLDEHCK 625
+AKLPFIDE +LL +K+E TLT EEE RRNS+M D+L+V +H L++ I +
Sbjct: 584 VAKLPFIDEKKLLAATRKLEDTLTMQEEEQRRNSVMLDLLYVNRAHDLASHILLYYQVFG 643
Query: 626 QLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSPVASMEDIMGNQVLCAIYKL 685
+L ER +N S GMNGY+ C + + SP+ + DI NQVL Y
Sbjct: 644 RLATHER--CVSPINANASGGMNGYLWACERNVLSSIAPSPIDGLPDIESNQVLNITYLN 701
Query: 686 PDAHKHVTRPPAGVIFPKKIVQLEDLKPAPVLWHEDS-GRRPHENGRHNPHGTISGRQLG 744
P H H+ +PP GV+ PKKI++ D+KP+PVLWHED+ GR R G I+G QLG
Sbjct: 702 PCRHGHIPKPPDGVVIPKKIIKDIDIKPSPVLWHEDNVGRGQQGRERSQVPGAITGSQLG 761
Query: 745 EAAHRLVANSLQHMKVDRNGYGDRMHGSPLPYAAAPYVPPVPSYQEYGVYDQGYNRFSQP 804
EAAHRLV N+L ++K + +G + P+ + + PS Y ++S
Sbjct: 762 EAAHRLVKNTL-NIKWNNTSHG-VLEQPPVRHTTNRFQSAGPS---------RYGKYSGE 810
Query: 805 RTDSYPAGHS-QSSISAAQPPYDGGYSQHYASNTSHHPNRRYHPQYDRNSSGEHPTHLYN 863
T+SY H+ +++ + P Q N R+ Q+ +G + L N
Sbjct: 811 NTNSYYGEHNHHGAMTRHRYPVSSNAGQVDRQNFRTQDRPRHQEQFQNVKTGF--SALTN 868
Query: 864 -----PSGIHQNGGPRYPPRPMGSTSSGANLYPPQGGYSGYQSPAAG 905
I N GP P RP+ + P G Y Q A+G
Sbjct: 869 GGRIETCTIEANSGP--PVRPLKWNTKA----PINGVYPRRQEAASG 909
>gi|242037819|ref|XP_002466304.1| hypothetical protein SORBIDRAFT_01g005340 [Sorghum bicolor]
gi|241920158|gb|EER93302.1| hypothetical protein SORBIDRAFT_01g005340 [Sorghum bicolor]
Length = 990
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 221/333 (66%), Positives = 262/333 (78%), Gaps = 10/333 (3%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+KDAAD+AAEEERLR+EFE EGR L K S+ DSNVITPGT+FM VL
Sbjct: 112 MNQQRSRRFRAAKDAADAAAEEERLRKEFEAEGRTLAQKEKSEAIDSNVITPGTQFMFVL 171
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S ALQYYI LRLN+ GW+ +K+ILSD+NVPGEGEHKIMSY+RLQRNLPG+DPNTRHCLY
Sbjct: 172 STALQYYIQLRLNHTLGWQSVKIILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLY 231
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIMLALATHEVHFSILREV+ PGQQ+KCFLCGQ GHLAA C G ++ D
Sbjct: 232 GLDADLIMLALATHEVHFSILREVISMPGQQEKCFLCGQAGHLAAECRGPSQP-----DN 286
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
+ + KK YQFL+IW LREYL + I + PF+I+ E ++DDF+FMCFFVGNDFLPH
Sbjct: 287 SVELPPIHKKKYQFLNIWVLREYLAKDLEIVDAPFKINFERLIDDFVFMCFFVGNDFLPH 346
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
MPTLEIREGAINLLM++Y+ EF ++GGYLTDG + L RVEHFIQ+V E++IFQKRAR
Sbjct: 347 MPTLEIREGAINLLMSIYRSEFTSMGGYLTDGGEVILDRVEHFIQSVAVNEEQIFQKRAR 406
Query: 301 LHQ-----RHAERIKREKAQARRGDDVEPLAQP 328
+ Q RI+RE ++ + D L +P
Sbjct: 407 IQQARENNEEKHRIQRENSEENQYVDKVKLGEP 439
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/411 (48%), Positives = 260/411 (63%), Gaps = 19/411 (4%)
Query: 383 GAAIVEAENSFETDPQENKEEF---KAKLKELLRDKSDA--FNSDNPEE----DKVKLGE 433
G I++ F N+E+ +A++++ + + +N EE DKVKLGE
Sbjct: 379 GEVILDRVEHFIQSVAVNEEQIFQKRARIQQARENNEEKHRIQRENSEENQYVDKVKLGE 438
Query: 434 PGWKERYYEEKFNAKTPEE-REETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAP 492
PG++ERYY EKF + + ++ R+DVV +Y EGLCWVM YYY+GVCSWQWFYPYHYAP
Sbjct: 439 PGYRERYYAEKFKEEAESKPIDQVRRDVVQKYVEGLCWVMRYYYQGVCSWQWFYPYHYAP 498
Query: 493 FASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPT 552
FASDLK L + I+F LG PFKPF+QL+G P+ASS+ALP++Y LMTDP+SP+ FYP
Sbjct: 499 FASDLKGLAELEITFFLGQPFKPFDQLMGTLPAASSNALPKYYGDLMTDPDSPLKSFYPK 558
Query: 553 DFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHP 612
DFE+DMNGKR++WQGIAKLPFIDE RLL E +K+E +LTEEE RN M D+++V +HP
Sbjct: 559 DFEIDMNGKRFAWQGIAKLPFIDEMRLLAETRKLEDSLTEEERFRNRTMFDIIYVRDTHP 618
Query: 613 LSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSPVASMED 672
LS+ I L ++ L + + + P +S GMNG++ + + SPV
Sbjct: 619 LSSQIMFLYQNYYHLSRTDPYVIP--IQPAVSGGMNGFLCLSERNWYIVTVTSPVRGFNG 676
Query: 673 IMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKPAPVLWHEDSGRRPHENGRH 732
I N+VL A Y P HKH+ PPAGVI P KI++ D KP PVLWHED+ RR R
Sbjct: 677 IAQNRVLNATYLNPQYHKHIPEPPAGVIIPAKILKPSDFKPFPVLWHEDNSRR-QTRERP 735
Query: 733 NPHGTISGRQLGEAAHRLVANSLQHMKVDRNGYGDRMHGSPLPYAAAPYVP 783
G +SG LG AAHRLV NSLQ + G D +PY APY P
Sbjct: 736 QVSGALSGSLLGAAAHRLVKNSLQIKSGNAAGLID------MPYRGAPYSP 780
>gi|298204908|emb|CBI34215.3| unnamed protein product [Vitis vinifera]
Length = 1083
Score = 431 bits (1108), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/304 (70%), Positives = 249/304 (81%), Gaps = 9/304 (2%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+KDAA++ AEEERLR+EFE EG+ L PK + DSNVITPGT+FMAVL
Sbjct: 108 MNQQRSRRFRAAKDAAEAEAEEERLRKEFEVEGKMLSPKEKPETSDSNVITPGTKFMAVL 167
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S+ALQYYIH RLN +PGW KVILSD+NVPGEGEHKIMSY+R QRNL G++PNTRHCLY
Sbjct: 168 SVALQYYIHSRLNRNPGWCSTKVILSDSNVPGEGEHKIMSYIRSQRNLLGFNPNTRHCLY 227
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML+LATHEVHFSILRE++ PGQQ+KC+LCGQ GHLAA C G E
Sbjct: 228 GLDADLIMLSLATHEVHFSILREMITPPGQQEKCYLCGQVGHLAAECRGI---------E 278
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D+ + KK YQFL+IW LREYL Y+ I NPPFEI+ E ++DDF+F+CFFVGNDFLPH
Sbjct: 279 VVDDTPIHKKKYQFLNIWVLREYLQYDLEILNPPFEINFERLLDDFVFLCFFVGNDFLPH 338
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
MPTLEIREGAINLLM VY++EF A+GGYLTD + L RVEHFI++V YED+IFQKR R
Sbjct: 339 MPTLEIREGAINLLMHVYRREFSAMGGYLTDAGEVLLDRVEHFIESVAVYEDQIFQKRTR 398
Query: 301 LHQR 304
+ QR
Sbjct: 399 IQQR 402
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/376 (51%), Positives = 250/376 (66%), Gaps = 11/376 (2%)
Query: 428 KVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYP 487
+VKLGEPG+KERYY EKFN PEE ++ RK++V++Y EGLCWV YYY+GVCSWQW+YP
Sbjct: 670 QVKLGEPGYKERYYTEKFNLSNPEEIDKVRKEIVMKYVEGLCWVCRYYYQGVCSWQWYYP 729
Query: 488 YHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPIS 547
+HYAPFASDLKDL I+F LG PFKPF+QL+G P+AS+ +LPE+YRKLMTD +SPI
Sbjct: 730 FHYAPFASDLKDLVDLEITFFLGEPFKPFDQLMGTLPAASASSLPENYRKLMTDQSSPIL 789
Query: 548 DFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
DFYP+DFE+DMNGKRY+WQG+AKLPFIDE +LL E KK+E TLT EE RNS+M D+L+V
Sbjct: 790 DFYPSDFEIDMNGKRYAWQGVAKLPFIDEEKLLAETKKLEVTLTVEEQVRNSVMFDLLYV 849
Query: 608 LLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSPV 667
HPL+ I + RV +N S GMNGY+ C + F S +
Sbjct: 850 HAVHPLATQIIYYYHFYQSSPPLARVIWPIDINA--SGGMNGYLWLCERNGWRSEFPSSI 907
Query: 668 ASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKPAPVLWHEDSGRRPH 727
+ +++I NQV Y P HKH+ PP GV+ P+K+++ D+KP PVLWHED+G R
Sbjct: 908 SGLQNIEHNQVFNVTYVNPPHHKHIPEPPMGVVMPEKVLRPFDIKPLPVLWHEDNGGR-R 966
Query: 728 ENGRHNPHG--TISGRQLGEAAHRLVANSLQHMKVDRNGYGDRMHGSPLPYAAAP--YVP 783
+ GR P ISG LGEAAHRL+ N+L ++K + G + PY P YV
Sbjct: 967 QQGRERPQVPRAISGPLLGEAAHRLLKNTL-NIKPNNTSSGMLLQT---PYRNMPSNYVV 1022
Query: 784 PVPSYQEYGVYDQGYN 799
P Y++G+N
Sbjct: 1023 NRPRPAGPSGYEKGFN 1038
>gi|359487905|ref|XP_002271987.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vitis vinifera]
Length = 950
Score = 431 bits (1107), Expect = e-117, Method: Compositional matrix adjust.
Identities = 219/326 (67%), Positives = 258/326 (79%), Gaps = 10/326 (3%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+KDAA++ AEEERLR+EFE EG+ L PK + DSNVITPGT+FMAVL
Sbjct: 108 MNQQRSRRFRAAKDAAEAEAEEERLRKEFEVEGKMLSPKEKPETSDSNVITPGTKFMAVL 167
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S+ALQYYIH RLN +PGW KVILSD+NVPGEGEHKIMSY+R QRNL G++PNTRHCLY
Sbjct: 168 SVALQYYIHSRLNRNPGWCSTKVILSDSNVPGEGEHKIMSYIRSQRNLLGFNPNTRHCLY 227
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML+LATHEVHFSILRE++ PGQQ+KC+LCGQ GHLAA C G E
Sbjct: 228 GLDADLIMLSLATHEVHFSILREMITPPGQQEKCYLCGQVGHLAAECRGI---------E 278
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D+ + KK YQFL+IW LREYL Y+ I NPPFEI+ E ++DDF+F+CFFVGNDFLPH
Sbjct: 279 VVDDTPIHKKKYQFLNIWVLREYLQYDLEILNPPFEINFERLLDDFVFLCFFVGNDFLPH 338
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
MPTLEIREGAINLLM VY++EF A+GGYLTD + L RVEHFI++V YED+IFQKR R
Sbjct: 339 MPTLEIREGAINLLMHVYRREFSAMGGYLTDAGEVLLDRVEHFIESVAVYEDQIFQKRTR 398
Query: 301 LHQRHAERIKREKAQARRGDDVEPLA 326
+ Q+ E + K + +R EP A
Sbjct: 399 I-QQALENNEEMKLRTKREASEEPRA 423
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 194/359 (54%), Positives = 245/359 (68%), Gaps = 10/359 (2%)
Query: 399 ENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRK 458
EN EE K + K ++ A P EDKVKLGEPG+KERYY EKFN PEE ++ RK
Sbjct: 404 ENNEEMKLRTKREASEEPRA-----PVEDKVKLGEPGYKERYYTEKFNLSNPEEIDKVRK 458
Query: 459 DVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQ 518
++V++Y EGLCWV YYY+GVCSWQW+YP+HYAPFASDLKDL I+F LG PFKPF+Q
Sbjct: 459 EIVMKYVEGLCWVCRYYYQGVCSWQWYYPFHYAPFASDLKDLVDLEITFFLGEPFKPFDQ 518
Query: 519 LLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEAR 578
L+G P+AS+ +LPE+YRKLMTD +SPI DFYP+DFE+DMNGKRY+WQG+AKLPFIDE +
Sbjct: 519 LMGTLPAASASSLPENYRKLMTDQSSPILDFYPSDFEIDMNGKRYAWQGVAKLPFIDEEK 578
Query: 579 LLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKER 638
LL E KK+E TLT EE RNS+M D+L+V HPL+ I + RV
Sbjct: 579 LLAETKKLEVTLTVEEQVRNSVMFDLLYVHAVHPLATQIIYYYHFYQSSPPLARVIWPID 638
Query: 639 LNPELSDGMNGYISPCAGDPHPPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAG 698
+N S GMNGY+ C + F S ++ +++I NQV Y P HKH+ PP G
Sbjct: 639 INA--SGGMNGYLWLCERNGWRSEFPSSISGLQNIEHNQVFNVTYVNPPHHKHIPEPPMG 696
Query: 699 VIFPKKIVQLEDLKPAPVLWHEDSGRRPHENGRHNPHG--TISGRQLGEAAHRLVANSL 755
V+ P+K+++ D+KP PVLWHED+G R + GR P ISG LGEAAHRL+ N+L
Sbjct: 697 VVMPEKVLRPFDIKPLPVLWHEDNGGR-RQQGRERPQVPRAISGPLLGEAAHRLLKNTL 754
>gi|363753664|ref|XP_003647048.1| hypothetical protein Ecym_5486 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890684|gb|AET40231.1| hypothetical protein Ecym_5486 [Eremothecium cymbalariae
DBVPG#7215]
Length = 1002
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 245/664 (36%), Positives = 358/664 (53%), Gaps = 71/664 (10%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQV-FDSNVITPGTEFMAV 59
MNQQRSRRFR+++DA + E+ R+ E E G + ++ +DSN ITPGT FM
Sbjct: 110 MNQQRSRRFRSARDAKFANEEKARVLAEREAYGELIDDSVKAKTTWDSNAITPGTPFMDK 169
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
L+ AL+Y+ +L DPGW+ ++VI+SDA VPGEGEHKIM+++R QR Y+PNT HC+
Sbjct: 170 LAAALRYWTSFKLATDPGWKHLQVIISDATVPGEGEHKIMNFIRSQRVDSQYNPNTTHCI 229
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
YGLDADLI L LATHE HF ILRE VF + + N + K+ E D
Sbjct: 230 YGLDADLIFLGLATHEPHFKILREDVFAQDNRRR-----PRAQEMINMSEEDKQHLIEQD 284
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
+KP+ +LH+ LREYL E + F DLE +DD++FMCFF GNDFLP
Sbjct: 285 --------AEKPFLWLHVSVLREYLAAELHVQRLSFPFDLERAIDDWVFMCFFCGNDFLP 336
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P L++RE +I++L+ ++K +L YLT + +L V+ ++ +GS E +F+++
Sbjct: 337 HLPCLDVRENSIDILVEIWKTVLPSLKTYLTCDGELNLAGVQKVLEQLGSREPELFKRKH 396
Query: 300 RLHQRHAERIKREKA-----QARRGDDVEPLAQPDSLVPVSRFHGS-------------- 340
R E +R K +G P +PV +G
Sbjct: 397 EQESRKKEAQERRKMLKNNPNVTKGAVDRNFTVPLESMPVYDVNGKAADESLNLTNKDFA 456
Query: 341 ------RLASGPSPSPYQQSECVGRLDNGKGTSGRP-------------HKVPRLSSGAT 381
LA+ + + +NG + P +V LS+ A+
Sbjct: 457 NMRKEINLANEGDKTALGALQKRSEENNGTIKTDAPDFSQEELRNAVEVSRVGNLSAAAS 516
Query: 382 IGAAIVEAENSFETDPQENKEEFKAKLKEL------------------LRDKSDAFNSDN 423
+ I+ + ++ +E A+L + K +
Sbjct: 517 LKERILAKKRKLAAQEEDGRESKAARLTTDAGAHQAGSDHQESQLDVPIMSKETPISGFI 576
Query: 424 PEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQ 483
+ +V L EPG+ +RYY+ KF+A T ++ + R D+ Y EG+ WV+ YYY+G SW
Sbjct: 577 DTDKEVHLYEPGYHDRYYQAKFHAPT-KDIDSLRSDLARCYIEGIAWVLLYYYQGCPSWT 635
Query: 484 WFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPN 543
W+YPYHYAPFA+D ++ +SF+LG PF PF QL+GV P+AS H LP+ +R LM+DP+
Sbjct: 636 WYYPYHYAPFAADFVNISDLVVSFDLGQPFLPFEQLMGVLPAASGHNLPDVFRPLMSDPD 695
Query: 544 SPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMAD 603
S I DF+P +F +DMNG++ +W+GIA LPFIDE RL V+K H L++EE RN D
Sbjct: 696 SEIIDFFPEEFAIDMNGEKMAWKGIALLPFIDEQRLRTAVRKQYHLLSDEEKARNVQRND 755
Query: 604 MLFV 607
+L +
Sbjct: 756 VLII 759
>gi|357512203|ref|XP_003626390.1| 5'-3' exoribonuclease [Medicago truncatula]
gi|355501405|gb|AES82608.1| 5'-3' exoribonuclease [Medicago truncatula]
Length = 956
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/303 (69%), Positives = 245/303 (80%), Gaps = 2/303 (0%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+KDAA++ AEEERLR EF + L K ++ DSNVITPGT FMAVL
Sbjct: 113 MNQQRSRRFRAAKDAAEAEAEEERLRNEFADQIELLTSKEKTETHDSNVITPGTPFMAVL 172
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S+ALQYYI RLN +PGW KV+LSD+NVPGEGEHKIM Y+RLQRNLPG+DPNTRHCLY
Sbjct: 173 SVALQYYIQTRLNYNPGWRNTKVMLSDSNVPGEGEHKIMDYIRLQRNLPGFDPNTRHCLY 232
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML+LATHE+HFSILREV+ PGQQ+KC++CGQ GHLAA C GK A D
Sbjct: 233 GLDADLIMLSLATHEIHFSILREVITFPGQQEKCYMCGQVGHLAAECRGKPGDNA--LDW 290
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D+ + KK YQFLHIW LREYL YE IP+PPFEID E IVDDF+F+CFFVGNDFLPH
Sbjct: 291 PVDDTPIHKKKYQFLHIWVLREYLQYELLIPDPPFEIDFERIVDDFVFLCFFVGNDFLPH 350
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
MPTLEIREGA+NLLM +Y+KEF A+GGYLTD + L RVE+FIQ V +E++IFQKR R
Sbjct: 351 MPTLEIREGAVNLLMHIYRKEFTAMGGYLTDAGEVFLERVENFIQCVAVHEEQIFQKRVR 410
Query: 301 LHQ 303
+ Q
Sbjct: 411 IQQ 413
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/330 (55%), Positives = 231/330 (70%), Gaps = 3/330 (0%)
Query: 427 DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFY 486
DKVKLG+PG+ ERYY EKF A PE E +KD+VL+Y EGLCWV YYY+GVCSWQW+Y
Sbjct: 439 DKVKLGQPGYTERYYAEKFGASDPE-IERIKKDIVLKYVEGLCWVCRYYYQGVCSWQWYY 497
Query: 487 PYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPI 546
PYHYAPFASDLKDL I+F +G PF+PF+QL+G PS+SS ALPE YR LM +P+SPI
Sbjct: 498 PYHYAPFASDLKDLADLEITFFMGEPFRPFDQLMGTLPSSSSSALPERYRDLMINPSSPI 557
Query: 547 SDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 606
FYP+DFE+DMNGK+YSWQG+AKLPFIDE +LL + +E TLTEEE RNS M D+L+
Sbjct: 558 LQFYPSDFEIDMNGKKYSWQGVAKLPFIDEKKLLSATRTLEGTLTEEEQLRNSKMLDLLY 617
Query: 607 VLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSP 666
V +H L I ++ L ++R + ++P SDGMNG++ + V SP
Sbjct: 618 VSRAHKLVPHILFYYQNYSHLPHQQRPVLP--IDPSASDGMNGFLWSYERNVFRTVVSSP 675
Query: 667 VASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKPAPVLWHEDSGRRP 726
+ ++DI NQVL Y P H+H+ +PP GV+ P+KI++ D+KP PVLWHED+ RR
Sbjct: 676 IKGLQDIACNQVLNITYLNPRTHRHIPKPPDGVVMPQKILRALDIKPLPVLWHEDNSRRH 735
Query: 727 HENGRHNPHGTISGRQLGEAAHRLVANSLQ 756
R G I+G QLGEAAHRLV NSLQ
Sbjct: 736 QARERQQVPGAIAGPQLGEAAHRLVRNSLQ 765
>gi|307183882|gb|EFN70493.1| 5'-3' exoribonuclease 2-like protein [Camponotus floridanus]
Length = 630
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 244/544 (44%), Positives = 317/544 (58%), Gaps = 32/544 (5%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAV 59
MNQQRSRRFRASK+ + E +R+R E +G LPP K + FDSN ITPGT FMA
Sbjct: 111 MNQQRSRRFRASKETTEKINEIQRIRSELANKGAPLPPEKPKEEHFDSNCITPGTPFMAR 170
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
LS L YYIH RLN DPGW IKVILSDANVPGEGEHKIM ++R QR+ P +DPNT+H L
Sbjct: 171 LSACLHYYIHERLNKDPGWRNIKVILSDANVPGEGEHKIMDFIRRQRSQPDHDPNTQHVL 230
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
G DADLIML LATHE +F+I+RE F P + C +CGQ GH C G + E +
Sbjct: 231 CGADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCDICGQLGHEMRECTGAEPNQGQEEN 289
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
G E Y F+ + LREYL+ E +PN PF+ D E VDD++FMCFFVGNDFLP
Sbjct: 290 AFGSEC-----QYIFVRLNILREYLERELYMPNLPFKYDFERAVDDWVFMCFFVGNDFLP 344
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIREGAI+ L+A+YKK GG+LTD +L RV+ + +G ED IF+KR
Sbjct: 345 HLPSLEIREGAIDRLVALYKKAVYKTGGFLTDSGDVNLDRVQLIMSDLGDVEDEIFKKR- 403
Query: 300 RLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGR 359
Q +REK + RR + + +P +F + L P + E
Sbjct: 404 --QQNELAFKQREKDKKRRQEIISNFKP--KWIPAGQFAPTALGQTVKPIENARYEAYQM 459
Query: 360 LDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAF 419
G+ + T A ++ E + K K++E S
Sbjct: 460 RVQGRNYN-------------TNAGENTNANHALEIMLRPEIPGQKRKIEE----TSVDD 502
Query: 420 NSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGV 479
+ D D+V+L E G+K+RYYE KF+ + R +V L+Y GLCWV+ YYY+G
Sbjct: 503 DDDEQSHDEVRLWEDGFKDRYYESKFDVSP--DNLAFRNNVALQYVRGLCWVLRYYYQGC 560
Query: 480 CSWQWFYPYHYAPFASDLKDLDQFNISFELGH-PFKPFNQLLGVFPSASSHALPEHYRKL 538
SW+W++PYHYAPFASD ++ + FE PF+P QL+GVFP+AS +P + KL
Sbjct: 561 ASWRWYFPYHYAPFASDFINIGGLSTEFEKDTVPFRPLEQLMGVFPAASKKHVPAPWAKL 620
Query: 539 MTDP 542
MTDP
Sbjct: 621 MTDP 624
>gi|356576739|ref|XP_003556487.1| PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max]
Length = 931
Score = 427 bits (1098), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/317 (68%), Positives = 254/317 (80%), Gaps = 8/317 (2%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+KDAA++ AEEERLR+EF+ EG+ L K + DSNVITPGT+FM L
Sbjct: 112 MNQQRSRRFRAAKDAAEAEAEEERLRKEFQSEGKVLSSKDKPETSDSNVITPGTQFMVAL 171
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S++LQYYI RLN++P W KVILSD+N PGEGEHKIM Y+RLQRNLPG++PNTRHCLY
Sbjct: 172 SVSLQYYIQTRLNHNPSWRNTKVILSDSNAPGEGEHKIMEYIRLQRNLPGFNPNTRHCLY 231
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML+LATHEVHFSILREVV PGQQDKCFLCGQ GH AA+C+ A +FD
Sbjct: 232 GLDADLIMLSLATHEVHFSILREVVTLPGQQDKCFLCGQAGHFAADCQ------AEDFDT 285
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D+ + KK YQFL+IW LREYL +E IPNPPFEID E +VDDF+F+CFFVGNDFLPH
Sbjct: 286 P-DDSPIHKKKYQFLNIWVLREYLQFELEIPNPPFEIDFERVVDDFVFLCFFVGNDFLPH 344
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
MPTLEIREGAINLLM +Y+KEF A+GGYLTD + L RV+ FIQ V +ED+IFQKR R
Sbjct: 345 MPTLEIREGAINLLMHIYRKEFTAIGGYLTDAGEVFLDRVQRFIQFVTVHEDQIFQKRVR 404
Query: 301 LHQRHAERIKREKAQAR 317
+ Q AE + +A+AR
Sbjct: 405 I-QLAAENNEEMRARAR 420
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/341 (53%), Positives = 239/341 (70%), Gaps = 4/341 (1%)
Query: 427 DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFY 486
DKVKLGEPG+KERYY EKF EE ++ +KD+VL+Y EGLCWV YYY+GVCSW+W+Y
Sbjct: 433 DKVKLGEPGYKERYYVEKFGVSNLEEIDKIKKDIVLKYVEGLCWVCRYYYQGVCSWKWYY 492
Query: 487 PYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPI 546
PYHYAPFASD KDL I+F G PFKPF+QL+G P++SS ALP+ YR LM+DP+SPI
Sbjct: 493 PYHYAPFASDFKDLPDLEINFFPGEPFKPFDQLMGTLPASSSSALPKKYRDLMSDPSSPI 552
Query: 547 SDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 606
FYP DFE+DMNGKR++WQG+AKLPFIDE +LL ++IE TLTEEE RNS+M D+L+
Sbjct: 553 FHFYPADFEIDMNGKRFAWQGVAKLPFIDEKKLLAATRRIEDTLTEEEQLRNSVMLDLLY 612
Query: 607 VLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSP 666
V +H L+A I + C QL ER + ++ S GMNGY+ C + V SP
Sbjct: 613 VNRAHNLAAHILSYYHVCSQLPPHER--CVQPIDTNASGGMNGYLWLCERNVFSSVISSP 670
Query: 667 VASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKPAPVLWHEDS-GRR 725
++ ++DI NQVL + P H H+ +PP GV+ PKK+++ D+KP PVLWHED+ G+R
Sbjct: 671 ISGLQDIEYNQVLNITFLNPRRHDHIPKPPDGVVIPKKVLKAIDIKPFPVLWHEDNIGQR 730
Query: 726 PHENGRHNPHGTISGRQLGEAAHRLVANSLQHMKVDRNGYG 766
R G I+G QLGEAAHRLV N+L ++K + +G
Sbjct: 731 QQARERLQVPGAIAGSQLGEAAHRLVKNTL-NIKSNNTSHG 770
>gi|357512205|ref|XP_003626391.1| 5'-3' exoribonuclease [Medicago truncatula]
gi|355501406|gb|AES82609.1| 5'-3' exoribonuclease [Medicago truncatula]
Length = 629
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 212/303 (69%), Positives = 245/303 (80%), Gaps = 2/303 (0%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+KDAA++ AEEERLR EF + L K ++ DSNVITPGT FMAVL
Sbjct: 113 MNQQRSRRFRAAKDAAEAEAEEERLRNEFADQIELLTSKEKTETHDSNVITPGTPFMAVL 172
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S+ALQYYI RLN +PGW KV+LSD+NVPGEGEHKIM Y+RLQRNLPG+DPNTRHCLY
Sbjct: 173 SVALQYYIQTRLNYNPGWRNTKVMLSDSNVPGEGEHKIMDYIRLQRNLPGFDPNTRHCLY 232
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML+LATHE+HFSILREV+ PGQQ+KC++CGQ GHLAA C GK A D
Sbjct: 233 GLDADLIMLSLATHEIHFSILREVITFPGQQEKCYMCGQVGHLAAECRGKPGDNA--LDW 290
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D+ + KK YQFLHIW LREYL YE IP+PPFEID E IVDDF+F+CFFVGNDFLPH
Sbjct: 291 PVDDTPIHKKKYQFLHIWVLREYLQYELLIPDPPFEIDFERIVDDFVFLCFFVGNDFLPH 350
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
MPTLEIREGA+NLLM +Y+KEF A+GGYLTD + L RVE+FIQ V +E++IFQKR R
Sbjct: 351 MPTLEIREGAVNLLMHIYRKEFTAMGGYLTDAGEVFLERVENFIQCVAVHEEQIFQKRVR 410
Query: 301 LHQ 303
+ Q
Sbjct: 411 IQQ 413
Score = 244 bits (623), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 111/165 (67%), Positives = 133/165 (80%), Gaps = 1/165 (0%)
Query: 427 DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFY 486
DKVKLG+PG+ ERYY EKF A PE E +KD+VL+Y EGLCWV YYY+GVCSWQW+Y
Sbjct: 439 DKVKLGQPGYTERYYAEKFGASDPE-IERIKKDIVLKYVEGLCWVCRYYYQGVCSWQWYY 497
Query: 487 PYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPI 546
PYHYAPFASDLKDL I+F +G PF+PF+QL+G PS+SS ALPE YR LM +P+SPI
Sbjct: 498 PYHYAPFASDLKDLADLEITFFMGEPFRPFDQLMGTLPSSSSSALPERYRDLMINPSSPI 557
Query: 547 SDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLT 591
FYP+DFE+DMNGK+YSWQG+AKLPFIDE +LL + +E TLT
Sbjct: 558 LQFYPSDFEIDMNGKKYSWQGVAKLPFIDEKKLLSATRTLEGTLT 602
>gi|326498799|dbj|BAK02385.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 895
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 259/737 (35%), Positives = 374/737 (50%), Gaps = 128/737 (17%)
Query: 2 NQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLS 61
N+ R F+++K D+ AE L + F +G+++ P+ + D V PGTEFM +S
Sbjct: 123 NKLRQGYFKSTKQGTDAEAEAVLLTEIFRVQGKEVLPRDTYEFEDRTVKMPGTEFMETIS 182
Query: 62 IALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYG 121
+ L+++I RLN DP W+ IKVILSDANVPGEGEHKIMS++R QR+ YDPNTRHCLYG
Sbjct: 183 VVLEWFIRERLNTDPEWKDIKVILSDANVPGEGEHKIMSFIRAQRSRENYDPNTRHCLYG 242
Query: 122 LDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEK 181
DADLIMLALA+HEVH SILREV N G+
Sbjct: 243 HDADLIMLALASHEVHISILREV---------------------NPNGR----------- 270
Query: 182 GDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHM 241
+P + YQF++IW LREYL+ E + P + D E ++DDFI +C +GNDF+P +
Sbjct: 271 -----IPARLYQFVNIWVLREYLELEMKTPGC--KQDTERLIDDFICICCLMGNDFIPRI 323
Query: 242 PTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPS--------LRRVEHFIQAVGSYEDR 293
P+LEI E A++LL+ YK F +GGY+ + +K + R+E F + E++
Sbjct: 324 PSLEIHEFAVDLLIETYKTAFNRMGGYIVNTNKIKDKHGVYLEVSRLEKFFHELSLCEEK 383
Query: 294 IFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQ 353
I KR L ++ +I+RE A D GS L S +
Sbjct: 384 ILLKRYELQEKLLCKIQREAAGNEESSD-----------------GSDLISKSFVTQRST 426
Query: 354 SECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLR 413
S C +S E + ++N E + ++
Sbjct: 427 STC----------------------------------SSNEYNVRKNTRELWRAVNDICC 452
Query: 414 DKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMH 473
K D F + ++D + PGWK R+Y EKF A+T E + ++V +Y EGLCW++
Sbjct: 453 SKDDLFKNRACKQDHIG---PGWKFRFYREKFGAQTSNEVGRLQTEMVQKYLEGLCWMLQ 509
Query: 474 YYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFP---SASSHA 530
Y+ V SW W YP++YAPFASD L QFNISF + P +PF+QL+ V P S A
Sbjct: 510 CYFSEVPSWTWCYPFYYAPFASDFNCLPQFNISFTMDKPLRPFDQLMAVLPPEVHVLSSA 569
Query: 531 LPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTL 590
LP+ Y L+ S I FYP++FE+D GKR+ QG+AKLPFID LL K +E L
Sbjct: 570 LPKCYSTLIGCEESTIQMFYPSEFEIDTYGKRFLSQGVAKLPFIDNKLLLSATKMVEKDL 629
Query: 591 TEEEARRNSIMADMLFVLLSHPLS---ASIYTLDEHCKQLKIKERVEVKERLNPELSDGM 647
T +E RRN++ + +F+ SH L+ A + + + ++ + + E+
Sbjct: 630 TYDEMRRNNVRQERIFLRNSHSLTNNEAFVALFNGYPQKKLLIDTSEI------------ 677
Query: 648 NGYISPCAGDPHPPVFRSPVAS-----MEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFP 702
G+ SP D S + M + + A + P+A K ++R V+ P
Sbjct: 678 GGWFSP---DEECESLASRIDKEQWFYMLISEPDMTVSATFFNPEAVKPISRLLDNVMVP 734
Query: 703 KKIVQLEDLKPAPVLWH 719
K V D++ P +WH
Sbjct: 735 DKTVTEADIRKRP-MWH 750
>gi|413932825|gb|AFW67376.1| hypothetical protein ZEAMMB73_239358 [Zea mays]
Length = 990
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/315 (68%), Positives = 252/315 (80%), Gaps = 5/315 (1%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+KDAAD+AAEEERLR+EFE EGR L K S+ DSNVITPGTEFM VL
Sbjct: 112 MNQQRSRRFRAAKDAADAAAEEERLRKEFEAEGRTLAQKEKSEAIDSNVITPGTEFMFVL 171
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S ALQYYI LRLN+ GW+ +K+ILSD+NVPGEGEHKIMSY+RLQRNLPG+DPNTRHCLY
Sbjct: 172 STALQYYIQLRLNHTLGWQSVKIILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLY 231
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIMLALATHEVHFSILREV+ PGQ +KCFLCGQ GHLAA C G ++ D
Sbjct: 232 GLDADLIMLALATHEVHFSILREVISMPGQHEKCFLCGQVGHLAAECRGPSQP-----DN 286
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
+ + KK YQFL+IW LREYL + I + PF+I+ E ++DDF+FMCFFVGNDFLPH
Sbjct: 287 SVELPPIHKKKYQFLNIWVLREYLAKDLEIIDAPFKINFERLIDDFVFMCFFVGNDFLPH 346
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
MPTLEIREGAINLLM++Y+ EF ++GGYLTD + L RVEHFIQ+V E++IFQKRAR
Sbjct: 347 MPTLEIREGAINLLMSIYRSEFTSMGGYLTDVGEVILDRVEHFIQSVAVNEEQIFQKRAR 406
Query: 301 LHQRHAERIKREKAQ 315
+ Q ++ K Q
Sbjct: 407 IQQARENNEEKHKMQ 421
Score = 369 bits (947), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 196/412 (47%), Positives = 257/412 (62%), Gaps = 19/412 (4%)
Query: 382 IGAAIVEAENSFETDPQENKEEF---KAKLKELLRDKSDA--FNSDNPEED----KVKLG 432
+G I++ F N+E+ +A++++ + + +N EED KVKLG
Sbjct: 378 VGEVILDRVEHFIQSVAVNEEQIFQKRARIQQARENNEEKHKMQRENSEEDQYVDKVKLG 437
Query: 433 EPGWKERYYEEKFNAKTPEE-REETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYA 491
EPG++ERYY +KF + + + R+DVV +Y EGLCWVM YYY+GVCSWQWFYPYHYA
Sbjct: 438 EPGYRERYYADKFKEEAESKPIVQVRRDVVQKYVEGLCWVMRYYYQGVCSWQWFYPYHYA 497
Query: 492 PFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYP 551
PFASDLK L + I+F LG PFKPF+QL+G P+ASS+ALP++Y LM+DP+SP+ FYP
Sbjct: 498 PFASDLKGLAELEITFFLGQPFKPFDQLMGTLPAASSNALPKYYGDLMSDPDSPLKSFYP 557
Query: 552 TDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSH 611
DFE+DMNGKR++WQG+AKLPFIDE RLL E +K+E TLTEEE RN M D+++V +H
Sbjct: 558 KDFEIDMNGKRFAWQGVAKLPFIDERRLLAETRKLEDTLTEEEKFRNRTMLDIIYVRDTH 617
Query: 612 PLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSPVASME 671
PL I L ++ L + + + P S GMNG++ + + SPV
Sbjct: 618 PLITQIIFLYQNYYHLSRTDPYVIP--IEPAASGGMNGFLCLSERNWYSVTVTSPVKGFN 675
Query: 672 DIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKPAPVLWHEDSGRRPHENGR 731
I N+VL A Y P HKH+ PPAGVI P KI++ D KP PVLWH+D+ RR R
Sbjct: 676 GIAQNRVLNAAYLNPQYHKHIPEPPAGVIIPAKILKPSDFKPFPVLWHQDNSRR-QVRER 734
Query: 732 HNPHGTISGRQLGEAAHRLVANSLQHMKVDRNGYGDRMHGSPLPYAAAPYVP 783
G +SG LGEAAHRLV NSLQ + G +PY APY P
Sbjct: 735 PQVSGALSGSLLGEAAHRLVKNSLQIRSGNAAGL------LYMPYRGAPYGP 780
>gi|224123332|ref|XP_002319052.1| predicted protein [Populus trichocarpa]
gi|222857428|gb|EEE94975.1| predicted protein [Populus trichocarpa]
Length = 965
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/318 (67%), Positives = 250/318 (78%), Gaps = 2/318 (0%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+KDAA + AEEERLR+EFE EG L K + FDSNVITPGT+FMA L
Sbjct: 112 MNQQRSRRFRAAKDAAQAEAEEERLRKEFEAEGELLSVKEKPETFDSNVITPGTQFMAAL 171
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S ALQYYI RLN++ GW+ KVILSD+NVPGEGEHKIMSY+RLQRNL G++PNTRHCLY
Sbjct: 172 STALQYYIQSRLNHNLGWQNTKVILSDSNVPGEGEHKIMSYIRLQRNLSGFNPNTRHCLY 231
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
LDADLIML+LAT EVHFSILRE+V PGQQDKCFLCGQ GHLAA C GK A ++
Sbjct: 232 SLDADLIMLSLATREVHFSILREIVTLPGQQDKCFLCGQAGHLAAECRGKQGDDALDW-H 290
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D+ + KK YQFL+IW LREYL Y+ I NPPF ID E IVDDF+F+CFFVGNDFLPH
Sbjct: 291 VVDDTPIHKKKYQFLNIWVLREYLQYDLDILNPPFAIDFERIVDDFVFLCFFVGNDFLPH 350
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
MPTLEIREGAI+LLM +Y++EF A+GGYLT + L +VEHFIQ V YE++IFQKR R
Sbjct: 351 MPTLEIREGAISLLMHIYRREFSAMGGYLTLAGEVFLDKVEHFIQCVAVYEEQIFQKRTR 410
Query: 301 LHQRHAERIKREKAQARR 318
+ Q + + K +ARR
Sbjct: 411 IQQAF-DNNEEMKLKARR 427
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 188/376 (50%), Positives = 247/376 (65%), Gaps = 10/376 (2%)
Query: 399 ENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRK 458
+N EE K K + R+ S+ + P DKVKLGEPG+KERYY EKF EE ++ RK
Sbjct: 416 DNNEEMKLKAR---RESSEVIQA--PVVDKVKLGEPGYKERYYAEKFELSNQEEIDKVRK 470
Query: 459 DVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQ 518
+VVL+Y EGLCWV HYY++GVCSWQWFYP+HYAPFASDLKDL + ++F +G PFKPF+Q
Sbjct: 471 EVVLKYVEGLCWVCHYYFQGVCSWQWFYPFHYAPFASDLKDLGEVELNFFIGEPFKPFDQ 530
Query: 519 LLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEAR 578
L+G P+ASS+ALP+ YRKLMT+P+SPI F+P+DFE+DMNGKR++WQGIAKLPFIDE +
Sbjct: 531 LMGTLPAASSNALPKEYRKLMTNPSSPIHRFFPSDFEIDMNGKRFAWQGIAKLPFIDERK 590
Query: 579 LLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKER 638
LL + KK+E TLTEEE RN +M D+L++ HPL+ + + + L ER +
Sbjct: 591 LLAQTKKLESTLTEEEQIRNRVMLDLLYIHPVHPLAQLVISYYQQNDHLSEGERFAWE-- 648
Query: 639 LNPELSDGMNGYISPCAGDPHPPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAG 698
++ S GMNG + + V SP+ + + GNQVL + P H+ P G
Sbjct: 649 IDTRASGGMNGCLWLYERNVRRSVVPSPILGLPVLEGNQVLNITFLNPKNRGHIPEIPEG 708
Query: 699 VIFPKKIVQLEDLKPAPVLWHEDSGRRPHENGRHNPHGTISGRQLGEAAHRLVANSLQHM 758
V+ P+KIV+ DLKP P LWHED+GRR R I+G LG+AAHRLV N+L
Sbjct: 709 VVMPEKIVKPVDLKPFPTLWHEDNGRRQQGRERPQVQRAIAGPFLGDAAHRLVKNTL--- 765
Query: 759 KVDRNGYGDRMHGSPL 774
+ NG R+ L
Sbjct: 766 NIKPNGSSSRVFDQQL 781
>gi|413932824|gb|AFW67375.1| hypothetical protein ZEAMMB73_239358 [Zea mays]
Length = 652
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 218/333 (65%), Positives = 260/333 (78%), Gaps = 10/333 (3%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+KDAAD+AAEEERLR+EFE EGR L K S+ DSNVITPGTEFM VL
Sbjct: 112 MNQQRSRRFRAAKDAADAAAEEERLRKEFEAEGRTLAQKEKSEAIDSNVITPGTEFMFVL 171
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S ALQYYI LRLN+ GW+ +K+ILSD+NVPGEGEHKIMSY+RLQRNLPG+DPNTRHCLY
Sbjct: 172 STALQYYIQLRLNHTLGWQSVKIILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLY 231
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIMLALATHEVHFSILREV+ PGQ +KCFLCGQ GHLAA C G ++ D
Sbjct: 232 GLDADLIMLALATHEVHFSILREVISMPGQHEKCFLCGQVGHLAAECRGPSQP-----DN 286
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
+ + KK YQFL+IW LREYL + I + PF+I+ E ++DDF+FMCFFVGNDFLPH
Sbjct: 287 SVELPPIHKKKYQFLNIWVLREYLAKDLEIIDAPFKINFERLIDDFVFMCFFVGNDFLPH 346
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
MPTLEIREGAINLLM++Y+ EF ++GGYLTD + L RVEHFIQ+V E++IFQKRAR
Sbjct: 347 MPTLEIREGAINLLMSIYRSEFTSMGGYLTDVGEVILDRVEHFIQSVAVNEEQIFQKRAR 406
Query: 301 LHQ-----RHAERIKREKAQARRGDDVEPLAQP 328
+ Q +++RE ++ + D L +P
Sbjct: 407 IQQARENNEEKHKMQRENSEEDQYVDKVKLGEP 439
Score = 273 bits (699), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 132/249 (53%), Positives = 175/249 (70%), Gaps = 10/249 (4%)
Query: 382 IGAAIVEAENSFETDPQENKEEF---KAKLKELLRDKSDA--FNSDNPEED----KVKLG 432
+G I++ F N+E+ +A++++ + + +N EED KVKLG
Sbjct: 378 VGEVILDRVEHFIQSVAVNEEQIFQKRARIQQARENNEEKHKMQRENSEEDQYVDKVKLG 437
Query: 433 EPGWKERYYEEKFNAKTPEE-REETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYA 491
EPG++ERYY +KF + + + R+DVV +Y EGLCWVM YYY+GVCSWQWFYPYHYA
Sbjct: 438 EPGYRERYYADKFKEEAESKPIVQVRRDVVQKYVEGLCWVMRYYYQGVCSWQWFYPYHYA 497
Query: 492 PFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYP 551
PFASDLK L + I+F LG PFKPF+QL+G P+ASS+ALP++Y LM+DP+SP+ FYP
Sbjct: 498 PFASDLKGLAELEITFFLGQPFKPFDQLMGTLPAASSNALPKYYGDLMSDPDSPLKSFYP 557
Query: 552 TDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSH 611
DFE+DMNGKR++WQG+AKLPFIDE RLL E +K+E TLTEEE RN M D+++V +H
Sbjct: 558 KDFEIDMNGKRFAWQGVAKLPFIDERRLLAETRKLEDTLTEEEKFRNRTMLDIIYVRDTH 617
Query: 612 PLSASIYTL 620
PL I L
Sbjct: 618 PLITQIIFL 626
>gi|293333211|ref|NP_001170327.1| uncharacterized protein LOC100384297 [Zea mays]
gi|224035107|gb|ACN36629.1| unknown [Zea mays]
gi|413932823|gb|AFW67374.1| hypothetical protein ZEAMMB73_239358 [Zea mays]
Length = 490
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 218/333 (65%), Positives = 260/333 (78%), Gaps = 10/333 (3%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+KDAAD+AAEEERLR+EFE EGR L K S+ DSNVITPGTEFM VL
Sbjct: 112 MNQQRSRRFRAAKDAADAAAEEERLRKEFEAEGRTLAQKEKSEAIDSNVITPGTEFMFVL 171
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S ALQYYI LRLN+ GW+ +K+ILSD+NVPGEGEHKIMSY+RLQRNLPG+DPNTRHCLY
Sbjct: 172 STALQYYIQLRLNHTLGWQSVKIILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLY 231
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIMLALATHEVHFSILREV+ PGQ +KCFLCGQ GHLAA C G ++ D
Sbjct: 232 GLDADLIMLALATHEVHFSILREVISMPGQHEKCFLCGQVGHLAAECRGPSQP-----DN 286
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
+ + KK YQFL+IW LREYL + I + PF+I+ E ++DDF+FMCFFVGNDFLPH
Sbjct: 287 SVELPPIHKKKYQFLNIWVLREYLAKDLEIIDAPFKINFERLIDDFVFMCFFVGNDFLPH 346
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
MPTLEIREGAINLLM++Y+ EF ++GGYLTD + L RVEHFIQ+V E++IFQKRAR
Sbjct: 347 MPTLEIREGAINLLMSIYRSEFTSMGGYLTDVGEVILDRVEHFIQSVAVNEEQIFQKRAR 406
Query: 301 LHQ-----RHAERIKREKAQARRGDDVEPLAQP 328
+ Q +++RE ++ + D L +P
Sbjct: 407 IQQARENNEEKHKMQRENSEEDQYVDKVKLGEP 439
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 68/113 (60%), Gaps = 10/113 (8%)
Query: 382 IGAAIVEAENSFETDPQENKEEF---KAKLKELLRDKSDA--FNSDNPEED----KVKLG 432
+G I++ F N+E+ +A++++ + + +N EED KVKLG
Sbjct: 378 VGEVILDRVEHFIQSVAVNEEQIFQKRARIQQARENNEEKHKMQRENSEEDQYVDKVKLG 437
Query: 433 EPGWKERYYEEKFNAKTPEE-REETRKDVVLRYTEGLCWVMHYYYEGVCSWQW 484
EPG++ERYY +KF + + + R+DVV +Y EGLCWVM YYY+GVCSWQW
Sbjct: 438 EPGYRERYYADKFKEEAESKPIVQVRRDVVQKYVEGLCWVMRYYYQGVCSWQW 490
>gi|118355816|ref|XP_001011167.1| XRN2 [Tetrahymena thermophila]
gi|89292934|gb|EAR90922.1| XRN 5'-3' exonuclease N-terminus family protein [Tetrahymena
thermophila SB210]
Length = 1065
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 254/727 (34%), Positives = 379/727 (52%), Gaps = 103/727 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQV---FDSNVITPGTEFM 57
MNQQR+RRF+ +K+A + ++E L EF RE ++ + V FD+NVITPGT FM
Sbjct: 102 MNQQRARRFKGAKEAVELQQKKEELLNEF-RERSEINDDVLAFVQNRFDTNVITPGTAFM 160
Query: 58 AVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRH 117
LS+ALQ+Y+ R+N P ++ IKVI SDA++PGEGEHKI+ ++R+QR+ YDPNT+H
Sbjct: 161 RDLSMALQHYVIERMNKHPLFKDIKVIFSDASIPGEGEHKILDFIRVQRDQQNYDPNTKH 220
Query: 118 CLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGE 177
CLYG DADLIML L+THE +F I+RE + T ++ +C +C Q GH +C + +AG+
Sbjct: 221 CLYGADADLIMLGLSTHEPYFYIIREQIITQ-EEKRCSICQQTGHFQMDCPNEMAVEAGQ 279
Query: 178 --FDEK---GDEVVVPK---KPYQFLHIWTLREYLDYEFRIPNPPFEIDLEC-------- 221
+K E V K + +QF ++ +R+YL+ R F +LEC
Sbjct: 280 KPISQKILQAQEQKVRKGITQSFQFAKLYVMRQYLN--MRFSKVLFNDNLECKLKMQYDI 337
Query: 222 --IVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRR 279
I+DDF+FMCFFVGNDFLPH+P L IR+G I+ L+ +Y + YLT + +L++
Sbjct: 338 ERIIDDFVFMCFFVGNDFLPHIPNLSIRDGGIDALLTLYDHTITQVDDYLTCNGELNLKQ 397
Query: 280 VEHFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHG 339
V ++ + E+ + + R R + + K + R ++ P
Sbjct: 398 VAKLLENMAIVEEDLMKFRKDKEDRDKKNQEINKEKEARLQELRP--------------- 442
Query: 340 SRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQE 399
S YQ+ RL + K I+
Sbjct: 443 -----HISEEEYQKKRKEWRLKDEKKVE------------------II------------ 467
Query: 400 NKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLG-EPGWKERYYEEKFNAKTPEEREETRK 458
N E + K +L ++S+ + ++ ++ +K YY +KF K PE+ + +
Sbjct: 468 NNESLLQRFKRILSERSNEAKTIKEVKESTQITLNYNYKLSYYNDKFGVK-PEDFIQMQW 526
Query: 459 DVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQ 518
+ Y E LCW YYY+G SW W+YP+HY+PFASDL D+DQ I FE G PFKPF Q
Sbjct: 527 LIKQSYVEALCWNFAYYYKGCISWSWYYPFHYSPFASDLIDIDQHIIEFERGEPFKPFYQ 586
Query: 519 LLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEAR 578
LL VFP AS+ ++PE +R LM +P S I+DFYP DF VD+ GK++ W G LPFI+E R
Sbjct: 587 LLSVFPPASALSVPECFRPLMIEPTSEIADFYPIDFYVDLIGKKFEWLGEVILPFIEEER 646
Query: 579 LLDEVKKIEHTLTEEEARRNSIMADMLF---VLLSHPLSASIYTLDEHCKQLKIKERVEV 635
LL +K EH L+ EE +RN+ +F +++PL + +
Sbjct: 647 LLRAARKYEHLLSPEEKQRNTPGKIQIFYNQTSINYPLELN-----------------QT 689
Query: 636 KERLNPELSDGMNGYISPCAGDPHPPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRP 695
+ ++ L + N I+ P P +++ + N V C P+ KH +
Sbjct: 690 EHKITGVLDNNCNFLING------PINLLDPQLNLKRVTLNNVQCRNITFPEFEKHGIQL 743
Query: 696 PAGVIFP 702
G+I P
Sbjct: 744 LEGLIEP 750
>gi|300176532|emb|CBK24197.2| unnamed protein product [Blastocystis hominis]
Length = 1028
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 250/652 (38%), Positives = 356/652 (54%), Gaps = 54/652 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRF A ++ D E+ +R G+K+PP S FDSN ITPGTE+M +
Sbjct: 112 MNQQRSRRFSAFQERQDRKDAEDEIRSRMLAAGKKVPPPRTSS-FDSNKITPGTEYMMEI 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L++YI R++++P W+ + VILSD +VPGEGEHKIM Y+R +R PGYDPNT+H ++
Sbjct: 171 CDNLRWYIADRMSHNPAWQNVTVILSDGSVPGEGEHKIMDYIRRERAQPGYDPNTKHIIH 230
Query: 121 GLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADLIML LATHE +F ILRE V + Q +C LCG GHLAA C+GK + G
Sbjct: 231 GLDADLIMLGLATHEAYFYILREEVTSSTLQVTRCALCGSDGHLAAQCQGKKPQPRGALT 290
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEF----RIPNPPFEIDLECIVDDFIFMCFFVGN 235
+ + K+P Q L + LREYL EF R+ + P+ D E ++DD + +CF VGN
Sbjct: 291 RESKYM---KQPLQILQLPVLREYLQGEFGLLERVISFPY--DFEHVLDDIVLLCFLVGN 345
Query: 236 DFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLT-DGSKPSLRRVEHFIQAVGSYEDRI 294
DFLP +P L IREGA++LL +YK A GYLT DG K L R+ + + E I
Sbjct: 346 DFLPRLPCLSIREGALDLLFNLYKSILPAERGYLTADGGKIDLPRLHRIFEELAKVEGEI 405
Query: 295 FQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQS 354
++R R R +++A+A R D + L P+ +PV R Q+
Sbjct: 406 LRRR-----RWINRDNQQRARAARTDHL--LKAPEVKLPVKRNREEISLENEDEDDDDQN 458
Query: 355 ECVGRLDNGKGT--SGRPHKVPRLSSGATIG-----AAIVEAENSF----ETDPQE---- 399
+ + S + K L++ T A ++A+ + +T+P +
Sbjct: 459 GGDFDKETAVDSEDSAKEKKAANLAAAVTDALFAEQTAKIDADAAANQNQDTNPSDGNTN 518
Query: 400 ----NKEEFKAKLKELLRDKSDA-------------FNSDNPEEDKVKLGEPGWKERYYE 442
N E + L +DK + N+D+ +D ++LGE GWK+RYY
Sbjct: 519 PSGGNGETASSALSAEEKDKIEMEYFSLEFLKEWKKRNTDDSVQDTIRLGEEGWKQRYYR 578
Query: 443 EKFNAKTPEEREETR--KDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDL 500
EKF + P +R + + + Y EGL W+M YYY+G SW WF+P+H+AP AS L +
Sbjct: 579 EKF-CRKPGDRLDGAFYRSICTSYVEGLRWIMLYYYKGCPSWDWFFPFHFAPCASTLAEF 637
Query: 501 DQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNG 560
F+ G PF+P +QL+ P ++ LP+ +++LMT PNSPI DFYP E D +G
Sbjct: 638 SYEATPFKEGKPFRPLDQLMANQPPGCAYLLPKPFQELMTSPNSPIRDFYPKRIEYDTDG 697
Query: 561 KRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHP 612
+ W A + FID+ RLL + + LT + RN + D+L V S P
Sbjct: 698 LPFRWLWTALISFIDKDRLLAAIDSVMDQLTPADLIRNHVGVDLLCVRRSIP 749
>gi|326494150|dbj|BAJ85609.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1014
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/316 (69%), Positives = 255/316 (80%), Gaps = 5/316 (1%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+KDAAD+AAEEERLR EFE EGR L K S+ DSNVITPGT FM VL
Sbjct: 112 MNQQRSRRFRAAKDAADAAAEEERLRLEFEAEGRNLVRKEKSEAIDSNVITPGTPFMFVL 171
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S ALQYYI LRLN+ PGW+ +KVILSD+NVPGEGEHKIMSY+RLQRNLPG+DPNTRH LY
Sbjct: 172 SSALQYYIQLRLNHSPGWQSVKVILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHVLY 231
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIMLALATHEVHFSILREV+ PGQ +KCFLCGQ GHLAA C+G G D
Sbjct: 232 GLDADLIMLALATHEVHFSILREVITMPGQHEKCFLCGQVGHLAAECQG-----PGPADN 286
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
+ + KK YQFL+IW LREYL+ + I +PPF+I+LE I+DDF+F+CFFVGNDFLPH
Sbjct: 287 VVELPPIHKKKYQFLNIWVLREYLEKDLEIVDPPFKINLERILDDFVFLCFFVGNDFLPH 346
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
MPTLEIREGAINLLM +Y+ EF+ +GGYLTDG + L RVEHFIQAV +E++IF+KRAR
Sbjct: 347 MPTLEIREGAINLLMNIYRAEFKPMGGYLTDGGEVLLERVEHFIQAVAIHEEQIFRKRAR 406
Query: 301 LHQRHAERIKREKAQA 316
+ + + R +AQ
Sbjct: 407 IQKAYENNEDRRRAQG 422
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 194/366 (53%), Positives = 245/366 (66%), Gaps = 9/366 (2%)
Query: 419 FNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEE-REETRKDVVLRYTEGLCWVMHYYYE 477
+ +N D VKLGEPG++ERYY EKF + + ++ ++DVV +Y EGLCWVM YYY+
Sbjct: 424 ISEENQYVDMVKLGEPGFRERYYAEKFREEAESKPIDQVQRDVVQKYVEGLCWVMRYYYQ 483
Query: 478 GVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRK 537
GVCSWQWFYPYHYAPFASDLK L +F I+F LG PFKPF+QL+G P+ASS+ALP+HY
Sbjct: 484 GVCSWQWFYPYHYAPFASDLKSLTEFEITFFLGQPFKPFDQLMGTLPAASSNALPKHYGD 543
Query: 538 LMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARR 597
LMTDPNSP++ FYP DFE+DMNGKR++WQGIAKLPFIDE RLL E +K+E TLTEEE R
Sbjct: 544 LMTDPNSPLNYFYPKDFEIDMNGKRFAWQGIAKLPFIDERRLLAETQKLEDTLTEEERFR 603
Query: 598 NSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGD 657
N+ M D+++V +HPLSA I L + Q I + ++P S GMNG++ +
Sbjct: 604 NTTMFDIIYVRETHPLSAHIALLYQMYSQQMITDPSYCLP-IDPAASGGMNGFLCLSQRN 662
Query: 658 PHPPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKPAPVL 717
+ SPV I N+VL A Y P HKH+ PP GVI P KI++ D KP P+L
Sbjct: 663 WYSISVESPVKGFNGITNNRVLNATYVSPQYHKHIPEPPEGVIIPPKILKPYDFKPFPIL 722
Query: 718 WHEDSGRRPHENGRHNPHGTISGRQLGEAAHRLVANSLQHMKVDRNGYGDRMHGSPLPYA 777
WHED+ RR R HG ++G LGEAAHRL+ NSLQ + +H +PY
Sbjct: 723 WHEDNSRR-QTRDRPQVHGALTGSVLGEAAHRLLKNSLQ---IKSGSSAGLLH---VPYG 775
Query: 778 AAPYVP 783
AAPY P
Sbjct: 776 AAPYGP 781
>gi|429329440|gb|AFZ81199.1| 5'->3' exoribonuclease, putative [Babesia equi]
Length = 828
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 247/630 (39%), Positives = 345/630 (54%), Gaps = 103/630 (16%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
+NQQRSRRF+++ DA +L +EF ++ +P + D +DSNVITPGT FM L
Sbjct: 114 INQQRSRRFKSAADADLEDEVYNKLVEEFGKKKGDIPIRKDK--WDSNVITPGTPFMHEL 171
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S + YI R+ W++I VI SD+ VPGEGEHKIM ++R QR+ P YDPNT+H L+
Sbjct: 172 SKRIVDYIQDRIEKYDAWKRITVIFSDSGVPGEGEHKIMKFIRNQRHAPNYDPNTKHVLH 231
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G+DADLIML LATHEV+F ILRE+V F+ +P AN +AK
Sbjct: 232 GMDADLIMLGLATHEVNFFILREIVTN-------FINFKPEDNVANQIEQAKS------- 277
Query: 181 KGDEVVVPK------------------KPYQFLHIWTLREYLDYEFRIPNPPFE----ID 218
VVPK KP QFL + LREYL Y+ PN + ID
Sbjct: 278 -----VVPKEKPTSSHQQYISLMRQSWKPMQFLQLPVLREYLSYQLHFPNGWRDREGVID 332
Query: 219 LECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLR 278
E VDD + MCFF GNDFLPH+P++ I G+I+ ++ +Y+K LG YL++ ++
Sbjct: 333 FERCVDDLVLMCFFCGNDFLPHLPSISITGGSIDQMILLYQKILPDLGDYLSNEGDLNMP 392
Query: 279 RVEHFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFH 338
+V F+ + E+++F++ Q H ER KR+ Q + +++F
Sbjct: 393 QVGSFVSYLSKIENQVFKQA----QEHKERYKRKMQQNGNSE-------------IAQF- 434
Query: 339 GSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQ 398
G +K +L G+ A++ E +
Sbjct: 435 -----------------------------GNVNKNRKLDDGS---ASVEPKEEGY----- 457
Query: 399 ENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPG-WKERYYEEKFNAKTPEEREETR 457
+ EFK + +E+L+ + D E + L +P WKE YY EKFN ++
Sbjct: 458 -TEAEFKRRQEEILKQERTV--EDPKEPIDLSLNDPKLWKEAYYREKFNLGPNDDVTSLV 514
Query: 458 KDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFN 517
+VV Y EGL WV+ YYY+G SW WFYP+HYAPF SDLK + +I FELG PF F
Sbjct: 515 NNVVFHYVEGLAWVLKYYYQGCVSWGWFYPFHYAPFCSDLK-FEGLDIKFELGKPFTAFQ 573
Query: 518 QLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEA 577
QL+ V P SSH LP+ +R+LMTD NSP++DFYP F+ D NGKRY +Q +A LPFIDE
Sbjct: 574 QLMSVMPIRSSHCLPKEFRELMTDSNSPLADFYPLKFKEDPNGKRYKYQWVALLPFIDEK 633
Query: 578 RLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
RLL+ V+ IE +L++ + RN+I D++F+
Sbjct: 634 RLLNIVEPIEKSLSKVDKDRNAISKDLIFM 663
>gi|440793174|gb|ELR14365.1| Exonuclease ii, putative [Acanthamoeba castellanii str. Neff]
Length = 1421
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 246/614 (40%), Positives = 337/614 (54%), Gaps = 74/614 (12%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RR R ++++ ++ E+ R+ E K +FDSN ITPGTEFMA L
Sbjct: 60 MNQQRQRRLRTAQESKEAL---EKARETGE--------KVQEDMFDSNCITPGTEFMAKL 108
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S L+Y+I ++ D W K++VILS VPGEGEHKIM Y+R Q+ LP +DPNTRHCLY
Sbjct: 109 SDYLKYFIRKKIKEDSAWRKVEVILSGHEVPGEGEHKIMEYIRRQKMLPEHDPNTRHCLY 168
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIMLALA+HE HF++LRE V G+ K+K
Sbjct: 169 GLDADLIMLALASHEPHFALLREEV---------------------TFGRRKKKP----- 202
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
E PK +Q L + LREYLD EFR PF DLE ++DDF+ CFFVGNDFLP+
Sbjct: 203 ---EATPPK--FQLLFVNLLREYLDEEFRT-ELPFGYDLERVIDDFVLFCFFVGNDFLPN 256
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P ++I +GA++ + +Y++ LGGY+T+ + R E F++ + YE +
Sbjct: 257 LPYMDIADGALDKMFDIYRELLPTLGGYITEKGEILWERCEKFLKQIAKYEQEMLSTMPP 316
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRL 360
LH E Q+ + D+ E +PD S+F+ +L +
Sbjct: 317 LHLEVLE-------QSLQSDNEEEEDRPDE-ADRSKFNAWQLK-------------MKEK 355
Query: 361 DNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLK---ELLRDKSD 417
N SG H V G + AE ET E + K+ + + S+
Sbjct: 356 QNTLRASGEKHPVANDEGGNSNEVEDALAELDEETVVFEGGLKAKSDSEYDFAAMAAASE 415
Query: 418 AFNSDN----PEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMH 473
FN EE++ + + WK YY +KF + E EE K + Y EGL WV+
Sbjct: 416 KFNEQRNRPRDEEEEEEYDDDSWKNWYYRDKF--RIGLENEEYHKHLRTSYLEGLVWVLR 473
Query: 474 YYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPE 533
YYY G CSW WF+P+HYAP SDL +L + + F+LG PF PF QL+GV P+AS LP
Sbjct: 474 YYYRGCCSWNWFFPFHYAPLCSDLVNLTSYKLKFDLGTPFYPFQQLMGVLPAASKTLLPV 533
Query: 534 HYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHT-LTE 592
Y++LMT SPI DFYP +F+VDMNGKR +W+ IA +PFIDE RLLD + ++ L+E
Sbjct: 534 PYQELMTRATSPIIDFYPEEFKVDMNGKRNAWEAIALIPFIDEKRLLDAMDTVDKNRLSE 593
Query: 593 EEARRNSIMADMLF 606
+E +R+S +F
Sbjct: 594 KERKRDSFGVAYVF 607
>gi|426199678|gb|EKV49603.1| hypothetical protein AGABI2DRAFT_184268 [Agaricus bisporus var.
bisporus H97]
Length = 1454
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 273/738 (36%), Positives = 366/738 (49%), Gaps = 141/738 (19%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR +K+A D +R++ E++G KLP D + FDSN ITPGT FMA L
Sbjct: 99 MNQQRSRRFRTAKEAKD-------VREKAEKKGEKLP---DEKAFDSNCITPGTLFMARL 148
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S L+Y+++ +++ D W I+V+LS VPGEGEHKIM Y+RL R P Y+PN RHCLY
Sbjct: 149 SEQLRYFVNKKISEDANWRDIEVVLSGHEVPGEGEHKIMEYIRLSRAQPDYNPNIRHCLY 208
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE
Sbjct: 209 GLDADLIMLGLLSHDPHFCLLRE------------------------------------- 231
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFL 238
EV + + LH+ +REYLD EFR PF LE ++DDFI + FVGNDFL
Sbjct: 232 ---EVNLESVNFYLLHLCLMREYLDLEFRDIESTLPFGYSLERVIDDFILLAVFVGNDFL 288
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ-- 296
P++P L I E + L VYKK L GY+ +G +++R++ + + +E +F+
Sbjct: 289 PNLPDLHIHENGLEKLFEVYKKVLPGLEGYINEGGVINVKRLQVILDEMARWEQDVFEKE 348
Query: 297 ----------------------KRARLHQRHAER-----IKREKAQARRGDDVEPLAQPD 329
KR+ L +R +K +R+G PL++
Sbjct: 349 YADLNWFKGKQAKHVKEMEMGRKRSSLALTKPQRDIFAKVKGYILASRKG----PLSKAG 404
Query: 330 SLVPVSRFHGS------RLA--------------------SGPSPSPYQQSECVGRLDN- 362
L ++ F S RLA + P + E G N
Sbjct: 405 KLTMLNTFPASERAFVTRLAEELHLSLRFDEFDENDNNILTLTLPGVQEDDEDGGVSKNE 464
Query: 363 ----GKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLR--DKS 416
GTS +V SSG G + E++ D + EE + + +L DK+
Sbjct: 465 EEKEANGTSSSDAEVVEESSG---GPPDSDWEDTSGDDDDADNEESRIAVDRVLNKYDKA 521
Query: 417 DAFNS------DNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCW 470
AF+ D E ++ WK YY+ K + + D+V RY EGL W
Sbjct: 522 PAFDDEEGGGFDARHERSIREKMDEWKRGYYQGKMEISYDDPK--GMGDLVYRYVEGLQW 579
Query: 471 VMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHA 530
VMHYYY GV SW WFY YHYAP SDL+ +D+ +FELG PFKPF QL+GV PSAS
Sbjct: 580 VMHYYYSGVASWGWFYNYHYAPRISDLRGVDKMTFNFELGTPFKPFQQLMGVLPSASMEL 639
Query: 531 LPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTL 590
+PE YR+LM DPNSPI DFYP +FE D+NGK+ W+ I K+PFIDE RLL + EH L
Sbjct: 640 IPEPYRELMYDPNSPILDFYPVEFESDLNGKKAEWEAIVKIPFIDEVRLLKAMATREHRL 699
Query: 591 TEEEARRNSIMADMLFVLLSHPLSASIY---------TLDE-HCKQLKIKERVEVKERLN 640
T EE +RNS F+ +P +++Y TL HC+ L
Sbjct: 700 TTEERKRNSWGTSTKFIY--NPGESTVYPSSLPGFFPTLQRCHCRMEDFDLPTLDGLHLV 757
Query: 641 PELSDGMNGYISPCAGDP 658
P L DG++ I AG P
Sbjct: 758 PGLLDGVSLGIESLAGFP 775
>gi|299749174|ref|XP_001838563.2| exonuclease II [Coprinopsis cinerea okayama7#130]
gi|298408317|gb|EAU83256.2| exonuclease II [Coprinopsis cinerea okayama7#130]
Length = 1468
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 249/635 (39%), Positives = 337/635 (53%), Gaps = 80/635 (12%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR +K+A + +R++ ER G KLP + + FDSN ITPGT FMA L
Sbjct: 121 MNQQRSRRFRTAKEAKE-------VREKAERRGEKLP---EEKAFDSNCITPGTPFMARL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S L+Y+I+ ++ D W ++V+LS VPGEGEHKIM Y+RL R P Y+PN RHCLY
Sbjct: 171 SAQLRYFINKKITEDSNWRSVEVVLSGHEVPGEGEHKIMEYIRLSRAQPDYNPNVRHCLY 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V K G +
Sbjct: 231 GLDADLIMLGLLSHDPHFCLLREEV----------------------------KFGPQRK 262
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPN--PPFEIDLECIVDDFIFMCFFVGNDFL 238
KG++ + Y LH+ +REYLD EFR PF +LE ++DDFI + FVGNDFL
Sbjct: 263 KGNQSLESTNFY-LLHLSLMREYLDLEFRDIEHVLPFPYNLERVIDDFILLAVFVGNDFL 321
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK- 297
P++P L I E + L VYKK L GY+ + +++R++ + + +E IF+K
Sbjct: 322 PNLPDLHIHENGLEKLFDVYKKALPGLNGYINESGTINVQRLQVVLDEMAVWEREIFEKE 381
Query: 298 ----------RARLHQRHAE------RIKREKAQARRGDDVEPLAQPDSLVP-VSRFHGS 340
+AR H + E ++ K Q D V+ + P + F +
Sbjct: 382 YADMNWFKGKQAR-HVKEMEMGRKRSKLVLTKRQREIFDKVKAFVLENRKAPSLEHFKAA 440
Query: 341 RLASGPSPSPYQQSECVGRLDNGKGTSGRPHK---------VPRLSSGATIGAAIVEAEN 391
RL + P ++ + +L S R + R + + E
Sbjct: 441 RLEM-VNDFPARERAFITQLSQDLHLSLRWDEYDEEDNNVVTWRFPRALEVSEDAEDEEG 499
Query: 392 SFETDPQENKEEFKAKLKEL-------LRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEK 444
+E D QE++E A + L + D + D E +K WK YY EK
Sbjct: 500 EWE-DMQEDEENVIAVDRVLNKYEKAPVEDPDAEGDFDARYERSIKEKMDEWKRSYYREK 558
Query: 445 FNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFN 504
+ +E D+V RY EGL WVMHYYY GV SW WFY YHYAP SDL+++DQ
Sbjct: 559 LEISYDDPKE--MGDLVYRYVEGLQWVMHYYYSGVASWGWFYNYHYAPRISDLRNVDQMT 616
Query: 505 ISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYS 564
+FELG PFKP+ QL+GV P AS +P Y+ LM DPNSPI DFYP +FE D+NGK+
Sbjct: 617 FNFELGKPFKPYEQLMGVLPVASKDHIPLAYQDLMYDPNSPILDFYPLEFESDLNGKKQD 676
Query: 565 WQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 599
W+ + K+PFIDE RLL + EH LT EE +RN+
Sbjct: 677 WEAVVKIPFIDEERLLKAMASREHRLTPEERQRNT 711
>gi|449442897|ref|XP_004139217.1| PREDICTED: 5'-3' exoribonuclease 4-like [Cucumis sativus]
Length = 934
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/275 (73%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+KDAA++ AEEERLR+EFE EG+ L PK + DSNVITPGTEFM VL
Sbjct: 112 MNQQRSRRFRAAKDAAEAEAEEERLRKEFEAEGQTLLPKEKPETCDSNVITPGTEFMGVL 171
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S+ALQYY RLN++PGW KVILSD+NVPGEGEHKIM Y+RLQRNLPG+DPNTRHCLY
Sbjct: 172 SVALQYYAQSRLNHNPGWRFTKVILSDSNVPGEGEHKIMQYIRLQRNLPGFDPNTRHCLY 231
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML+LATHEVHFSILREV+ PGQQ+KC+ CG+ GHLAA C GK+ G D
Sbjct: 232 GLDADLIMLSLATHEVHFSILREVIMLPGQQEKCYNCGKVGHLAAECRGKSD---GPEDW 288
Query: 181 KG-DEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
G DE + KK YQFL+IW LREYL YE IPNPPFEI+ E IVDDF+F+CFFVGNDFLP
Sbjct: 289 NGADETPIHKKKYQFLNIWVLREYLQYELDIPNPPFEINFERIVDDFVFLCFFVGNDFLP 348
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSK 274
HMPTLEIREGAINLLM +Y+KEF A+GGYLTD +
Sbjct: 349 HMPTLEIREGAINLLMHIYRKEFPAIGGYLTDAGE 383
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/376 (51%), Positives = 248/376 (65%), Gaps = 14/376 (3%)
Query: 381 TIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERY 440
IG + +A + QEN EE + + + + + P DK+KLGEPG+KERY
Sbjct: 373 AIGGYLTDAGEA-----QENNEEMRGRAR-----RENGPPPPPPTVDKIKLGEPGYKERY 422
Query: 441 YEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDL 500
Y EKFNA P E ++DVVL+Y EGLCWV YYY GVCSWQW+YPYHY+PFASDLK+L
Sbjct: 423 YAEKFNA-NPANIAEIKQDVVLKYVEGLCWVCRYYYSGVCSWQWYYPYHYSPFASDLKNL 481
Query: 501 DQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNG 560
I+F +G PFKPF+QL+G P+ASS ALPE YR LMTDP+SPI +FYP+DFE+DMNG
Sbjct: 482 ADLEITFFIGEPFKPFDQLMGTLPAASSTALPEKYRNLMTDPSSPILEFYPSDFEIDMNG 541
Query: 561 KRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTL 620
KR+ WQG+AKLPFIDE +LL + +++E +LT+EE RNS+M DML+ +HPLSA I++
Sbjct: 542 KRFQWQGVAKLPFIDERKLLAQTRRLEWSLTDEEKNRNSVMLDMLYTHCTHPLSAQIFSY 601
Query: 621 DEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSPVASMEDIMGNQVLC 680
+ QL R ++ S GMNGY+ C + V +SP+ S+ DI NQVL
Sbjct: 602 YQVASQLPPHAR--TCWVIDTNASGGMNGYLWLCERNVIRNVVQSPINSLPDIQCNQVLN 659
Query: 681 AIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKPAPVLWHED-SGRRPHENGRHNPHGTIS 739
Y P HKH+ PP G I PKK++ D+KP P LWHED S RR H R G I+
Sbjct: 660 VTYLNPQKHKHIPEPPKGAIIPKKVLSSLDIKPFPTLWHEDNSSRRSHGRDRPRVPGAIA 719
Query: 740 GRQLGEAAHRLVANSL 755
G LGEAAHRLV N+L
Sbjct: 720 GPLLGEAAHRLVKNTL 735
>gi|307136058|gb|ADN33909.1| 5'-3' exoribonuclease [Cucumis melo subsp. melo]
Length = 934
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/275 (73%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+KDAA++ AEEERLR+EFE EG+ L PK + DSNVITPGTEFM VL
Sbjct: 112 MNQQRSRRFRAAKDAAEAEAEEERLRKEFEAEGQTLLPKEKPETCDSNVITPGTEFMGVL 171
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S+ALQYY RLN++PGW KVILSD+NVPGEGEHKIM Y+RLQRNLPG+DPNTRHCLY
Sbjct: 172 SVALQYYAQSRLNHNPGWRFTKVILSDSNVPGEGEHKIMQYIRLQRNLPGFDPNTRHCLY 231
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML+LATHEVHFSILREV+ PGQQ+KC+ CG+ GHLAA C GK+ G D
Sbjct: 232 GLDADLIMLSLATHEVHFSILREVIMLPGQQEKCYNCGKVGHLAAECRGKSD---GPEDW 288
Query: 181 KG-DEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
G DE + KK YQFL+IW LREYL YE IPNPPFEI+ E IVDDF+F+CFFVGNDFLP
Sbjct: 289 NGADETPIHKKKYQFLNIWVLREYLQYELDIPNPPFEINFERIVDDFVFLCFFVGNDFLP 348
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSK 274
HMPTLEIREGAINLLM +Y+KEF A+GGYLTD +
Sbjct: 349 HMPTLEIREGAINLLMHIYRKEFPAIGGYLTDAGE 383
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/376 (52%), Positives = 245/376 (65%), Gaps = 14/376 (3%)
Query: 381 TIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERY 440
IG + +A + QEN EE + + + + P DK+KLGEPG+KERY
Sbjct: 373 AIGGYLTDAGEA-----QENNEEMRGRAR-----RESGPPPPPPTVDKIKLGEPGYKERY 422
Query: 441 YEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDL 500
Y EKFNA P E R+DVVL+Y EGLCWV YYY GVCSWQW+YPYHY+PFASDLK+L
Sbjct: 423 YAEKFNA-NPANIAEIRQDVVLKYVEGLCWVCRYYYSGVCSWQWYYPYHYSPFASDLKNL 481
Query: 501 DQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNG 560
I+F LG PFKPF+QL+G P+ASS ALPE YR LMTDP+SPI +FYP+DFE+DMNG
Sbjct: 482 ADLEITFFLGEPFKPFDQLMGTLPAASSTALPEKYRNLMTDPSSPILEFYPSDFEIDMNG 541
Query: 561 KRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTL 620
KR+ WQG+AKLPFIDE +LL + +++E +LT+EE RNSIM D+L+ +HPLSA I++
Sbjct: 542 KRFLWQGVAKLPFIDERKLLAQTRRLEWSLTDEEKNRNSIMLDLLYTHCTHPLSAQIFSY 601
Query: 621 DEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSPVASMEDIMGNQVLC 680
+ QL R ++ S GMNGY+ C + V SP+ + DI NQVL
Sbjct: 602 YQVASQLPPHAR--TCWVIDTNASGGMNGYLWLCERNVIRNVVPSPIIGLPDIQCNQVLN 659
Query: 681 AIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKPAPVLWHED-SGRRPHENGRHNPHGTIS 739
Y P HKH+ PP G I PKK++ D+KP P LWHED S RR H R G I+
Sbjct: 660 VTYLNPQKHKHIPEPPKGAIIPKKVLSSLDIKPFPTLWHEDNSSRRSHGRERPRVPGAIA 719
Query: 740 GRQLGEAAHRLVANSL 755
G LGEAAHRLV N+L
Sbjct: 720 GPLLGEAAHRLVKNTL 735
>gi|183235666|ref|XP_657072.2| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
gi|169800426|gb|EAL51687.2| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
gi|449701673|gb|EMD42445.1| 5'3' exonuclease domain containing protein [Entamoeba histolytica
KU27]
Length = 937
Score = 401 bits (1030), Expect = e-108, Method: Compositional matrix adjust.
Identities = 236/608 (38%), Positives = 335/608 (55%), Gaps = 80/608 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRF+++KDA ++ + + R G LP + DSN ITPGTEFM+V+
Sbjct: 135 MNQQRSRRFKSAKDAENAELKHAEENRNKVRNG--LPEVPYIKPLDSNCITPGTEFMSVV 192
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S L+ YI R++ W K+ VILSD+ VPGEGEHKIM ++R Q+ P Y+PN HC+Y
Sbjct: 193 SKTLKKYIKERMSQSSYWNKLVVILSDSGVPGEGEHKIMDFIRRQKESPDYNPNIHHCMY 252
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML+LATHE FSI+RE VF +Q++C++C H C +++ G D
Sbjct: 253 GLDADLIMLSLATHERFFSIIREKVFF--EQEQCYICNNI-HSPDKC--PHRKEVGAMD- 306
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
KP+QFLH LR YL ++ FE C VDDFIF CF VGNDFLPH
Sbjct: 307 ------TITKPFQFLHCHILRGYLQITLKVEGFEFE---RC-VDDFIFFCFLVGNDFLPH 356
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+L+IR+GA++LLM VY +EF GGY+T+ ++ ++F+Q VG E I +K+ +
Sbjct: 357 IPSLDIRDGAVDLLMKVY-REFLPHGGYITESGSLNVTNAKNFLQEVGKEEPAILEKKCQ 415
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRL 360
+ +A+R RL
Sbjct: 416 KEKNYAKR--------------------------------------------------RL 425
Query: 361 DNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFN 420
DN R ++ + + E+ N+ + QE + +A++K+ + D+
Sbjct: 426 DN----QIRELEIKKANVYENSTLKSTESINTLTPEQQEQLKTQEAEIKK-IEDEERKLR 480
Query: 421 SDNPEE---DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYE 477
+D ++ D+VKLGEPG+ +RYY KF P++ + +D+V Y EG+ WV+ YYY+
Sbjct: 481 ADFEQKELTDEVKLGEPGYTQRYYSVKFKID-PQKDTQKIRDIVHSYFEGMNWVLGYYYK 539
Query: 478 GVCSWQWFYPYHYAPFASDLKDLDQFN--ISFELGHPFKPFNQLLGVFPSASSHALPEHY 535
G SW W+YPY YAPFA D+ + +N I ++ PF+PF QL+ V P S LP +
Sbjct: 540 GCQSWDWYYPYLYAPFAEDMGEYVDYNFEIKYKESIPFRPFEQLMSVLPPRSKSCLPYQF 599
Query: 536 RKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEA 595
LM SPISDFYP FE+D NG++ ++ I L FID+ +LL V+ IE LT E
Sbjct: 600 HDLMKSKGSPISDFYPDTFELDFNGEKVDYKAIVVLTFIDQEKLLHYVEPIEMGLTGELR 659
Query: 596 RRNSIMAD 603
+RN D
Sbjct: 660 QRNRRYGD 667
>gi|167383239|ref|XP_001736453.1| 5'-3' exoribonuclease [Entamoeba dispar SAW760]
gi|165901153|gb|EDR27303.1| 5'-3' exoribonuclease, putative [Entamoeba dispar SAW760]
Length = 858
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 253/675 (37%), Positives = 362/675 (53%), Gaps = 93/675 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRF+++KDA + AE ++ + R LP + FDSN ITPGTEFM+V+
Sbjct: 105 MNQQRSRRFKSAKDAEN--AELKQAEENRNRAKNGLPEIPYVRPFDSNCITPGTEFMSVV 162
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S L+ YI R++ W K+ VILSD+ VPGEGEHKIM ++R Q+ P Y+PN HC+Y
Sbjct: 163 SKTLKKYIKERMSQSSYWNKLVVILSDSGVPGEGEHKIMDFIRRQKESPDYNPNIHHCMY 222
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML+LATHE FSI+RE VF +QD+C++C + H C +++ G D
Sbjct: 223 GLDADLIMLSLATHERFFSIVREKVFF--EQDQCYICNKI-HPPDKCP--HRKEVGALD- 276
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
++ KP+QFLH LR YL ++ FE C VDDFIF CF VGNDFLP
Sbjct: 277 ----TII--KPFQFLHCHILRGYLQITLKVEGFEFE---RC-VDDFIFFCFLVGNDFLPR 326
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+L+IR+G ++LLM VY +EF GGY+T+ ++ ++F++ VG E I +K
Sbjct: 327 IPSLDIRDGGVDLLMKVY-REFLPHGGYITESGSLNVTNAKNFLREVGKEEPAILEK--- 382
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRL 360
+ ++EK A++ D + + Q + SR AS S + +E + L
Sbjct: 383 -------KYQKEKMNAKKNFDNQ-MKQLE----------SRKASIYENSTLKSTESINSL 424
Query: 361 DNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFN 420
P + +L +I + EN KE FK
Sbjct: 425 T--------PEQQEQLKIQEAEIKSIEQRENRL-------KERFKKA------------- 456
Query: 421 SDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVC 480
E+D +K+GE G+ +RYY KF P++ + +D+V Y EG+ WV+ YYY+G
Sbjct: 457 ---EEKDLLKMGESGYTQRYYNVKFKI-NPKKDTQKVRDIVHSYFEGMNWVLGYYYKGCQ 512
Query: 481 SWQWFYPYHYAPFASDLKDLDQFNISFELGH--PFKPFNQLLGVFPSASSHALPEHYRKL 538
SW W+YPY YAPFA D+ + +N F+ PF+PF QL+ V P S LPE + L
Sbjct: 513 SWDWYYPYLYAPFAEDMGEYVDYNFEFKYKKSIPFRPFEQLMSVLPPRSKSCLPEQFHDL 572
Query: 539 MTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
M SPIS+FYP F++D NG++ ++ I L FID+ +LL VK IE L + RRN
Sbjct: 573 MKSKGSPISEFYPDTFKLDFNGEKVDYKAIVVLTFIDQEKLLHYVKPIEKKLKGDAKRRN 632
Query: 599 SIMADMLFVL------------LSHPLSASIY-----TLDEHCKQLKIKERVEVKERLNP 641
D + +SI+ T+D+ K+ K + KE L P
Sbjct: 633 RRYGDSYIFIGKDNVKYFTTIQTFKTACSSIWGLIKPTIDKLNKKDKKVPLSDYKELLTP 692
Query: 642 ELSD--GMNGYISPC 654
++ G++G+I P
Sbjct: 693 IVNSQQGLSGFIIPV 707
>gi|167376304|ref|XP_001733946.1| 5'-3' exoribonuclease [Entamoeba dispar SAW760]
gi|165904779|gb|EDR29935.1| 5'-3' exoribonuclease, putative [Entamoeba dispar SAW760]
Length = 889
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 261/679 (38%), Positives = 368/679 (54%), Gaps = 101/679 (14%)
Query: 1 MNQQRSRRFRASKDAADSA---AEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFM 57
MNQQRSRRF+++K+ D+ AEE R R LP + DSN ITPGTEFM
Sbjct: 105 MNQQRSRRFKSAKEVDDNERKQAEENR-----NRVMNGLPEIPYVRPLDSNCITPGTEFM 159
Query: 58 AVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRH 117
+ +S AL+ YI R++ W K+ VILSD+ VPGEGEHKIM ++R Q+ P Y+PN H
Sbjct: 160 SAVSKALKKYIKERMSQSSYWNKLVVILSDSGVPGEGEHKIMDFIRRQKESPDYNPNIHH 219
Query: 118 CLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGE 177
C+YGLDADLIML+LATHE FSI+RE VF +Q++C++C H C +++ G
Sbjct: 220 CMYGLDADLIMLSLATHERFFSIIREKVFF--EQEQCYICNGI-HSPDKC--PHRKEVGA 274
Query: 178 FDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDF 237
D ++ KP+QFLH LR YL ++ FE C VDDFIF CF VGNDF
Sbjct: 275 LD-----TII--KPFQFLHCHILRGYLQITLKVEGFEFE---RC-VDDFIFFCFLVGNDF 323
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
LPH+P+L+IR+GA++LLM VY +EF GGY+T+ ++ ++F++ VG E I +
Sbjct: 324 LPHIPSLDIRDGAVDLLMKVY-REFLPHGGYITESGSLNVTNAKNFLREVGKEEPAILET 382
Query: 298 RARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECV 357
R + + +A+R R Q R D+E L + + S L S +E +
Sbjct: 383 RNKKEKNYAKR--RLDNQIR---DLE-------LKKANIYENSTLKS---------TESI 421
Query: 358 GRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAE-NSFETDPQENKEEFKAKLKELLRDKS 416
L P + +L I EAE S E + ++ +EEF+ KEL
Sbjct: 422 NSL--------TPEQQEQLK--------IQEAEIKSIENEERKLREEFEK--KEL----- 458
Query: 417 DAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYY 476
D++KLGEPG+ +RYY KF P++ + +D+V Y EG+ WV+ YYY
Sbjct: 459 ---------SDELKLGEPGYIQRYYNVKFKI-NPKKDTQKVRDIVHSYFEGMNWVLGYYY 508
Query: 477 EGVCSWQWFYPYHYAPFASDLKDLDQFN--ISFELGHPFKPFNQLLGVFPSASSHALPEH 534
+G SW W+YPY YAPFA D+ + +N I ++ PF+PF QL+ V P S LP
Sbjct: 509 KGCQSWDWYYPYLYAPFAEDMGEYVDYNFTIKYKESIPFRPFEQLMSVLPPKSKSCLPYQ 568
Query: 535 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 594
+ LM SPIS+FYP FE+D NG++ ++ IA L FID+ +LL V+ IE LT E
Sbjct: 569 FHDLMKSKGSPISEFYPDTFELDFNGEKVDYKAIAVLNFIDQEKLLHYVEPIEMELTGEL 628
Query: 595 ARRNSIMADMLFVLLSHPLS--ASIYTLDEHCKQL--KIKERV-------------EVKE 637
+RN D + + +I T C + IK + + KE
Sbjct: 629 RQRNRRYGDSYIFIGKDNVKYFTTIQTFKTTCSSIWGLIKPTIDKLNGEDKKVPLSDYKE 688
Query: 638 RLNPELSD--GMNGYISPC 654
L P ++ G++G+I P
Sbjct: 689 LLTPIVNSQQGLSGFIIPV 707
>gi|62701868|gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group]
gi|77548751|gb|ABA91548.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2340
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 253/682 (37%), Positives = 348/682 (51%), Gaps = 95/682 (13%)
Query: 83 VILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILR 142
VILSDANVPGEGEHKIMS++R QR GYDPNTRHCLYGLDADLIMLALA+HEVHFSILR
Sbjct: 1535 VILSDANVPGEGEHKIMSFIRAQRGREGYDPNTRHCLYGLDADLIMLALASHEVHFSILR 1594
Query: 143 EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAG--EFDEKGDEVVVPKKPYQFLHIWTL 200
E V Q+ P + K K +A E E + KKPYQFL+IW L
Sbjct: 1595 EEVLHQNNQENTIPI-TPKTFTSQEAEKFKCRAWFPRITEARPEGKLTKKPYQFLNIWVL 1653
Query: 201 REYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKK 260
REYL+ + +IPNP +D+E ++DDF+F+CF GNDF+PH+P+LEI EGAI+LL+ VYK
Sbjct: 1654 REYLELDMKIPNPIQTLDVERMIDDFVFICFLTGNDFIPHIPSLEIHEGAIDLLIEVYKT 1713
Query: 261 EFRALGGYLTDGSKP--------SLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIKRE 312
F +GGY+ D K + R+E F + YE++IF K L R E R+
Sbjct: 1714 SFNKMGGYIVDTDKVKDKHAAYLKVSRLEKFFHELSLYEEKIFLKCYDL-ARGFEDFGRK 1772
Query: 313 KAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLD----------- 361
+ + P G+ +A P + EC R++
Sbjct: 1773 VGEEAEEQQEQGSWVAHPFGPSEPDIGAPVACNTWAVPDRVGEC--RINFQRKIERQAAE 1830
Query: 362 ---NGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDA 418
N + T + + ++ + + S E D N E + LK++L +K D
Sbjct: 1831 NTWNERNTENVEENLD--DQCIMVKSSQTDGQVSDEQDITMNTLELRKNLKDILHNKQDL 1888
Query: 419 FNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVL---------------- 462
+ + DK+KLG PGWK R+++EKF+A+T +E + + ++V
Sbjct: 1889 IKTGACKHDKIKLGSPGWKSRFFKEKFDAETKDEIAKLQNEMVTISCFLNYANGILYLTV 1948
Query: 463 -RYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLG 521
+Y EGLCWV+ YY+ V SW W+YP++YAPFASD++ L +
Sbjct: 1949 QKYLEGLCWVLCYYFADVPSWSWYYPFYYAPFASDVRGLSR------------------- 1989
Query: 522 VFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLD 581
S ALP Y KLM S I FYP++ ++D +GKRY WQGIAKLPFI++ LL
Sbjct: 1990 ------SFALPGCYSKLMDCDESAIQAFYPSELDIDTDGKRYLWQGIAKLPFIEDKLLLS 2043
Query: 582 EVKKIEHTLTEEEARRNSIMADMLFVLLSHPLS---ASIYTLDEHCKQLKIK-ERVEVKE 637
K E L E RRN++ + +F+ S+ L+ A T D ++L I E+
Sbjct: 2044 VTKTAEKDLAVHELRRNTVRQEKIFLRNSNALAKNEAFAQTSDCSLQKLPIDPATSEIGG 2103
Query: 638 RLNPELSDGMNGYISPCAGDPHPPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPA 697
L+P+ D NG+ G P I + + A + P+A K TR
Sbjct: 2104 WLSPDDDDFSNGF----CGSP--------------IENDLSISAKFFNPEAVKPATRLLQ 2145
Query: 698 GVIFPKKIVQLEDLKPAPVLWH 719
V P K V D+ P LWH
Sbjct: 2146 NVTVPYKTVTEADICARP-LWH 2166
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 58/86 (67%), Gaps = 3/86 (3%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPK---SDSQVFDSNVITPGTEFM 57
MNQQR+RRF+++ A + EE LR F EG+K+ P+ S S+V D NVIT GTEFM
Sbjct: 109 MNQQRARRFKSAMAAKQAEVEENILRDRFRAEGKKVLPRETSSSSEVSDPNVITLGTEFM 168
Query: 58 AVLSIALQYYIHLRLNNDPGWEKIKV 83
LS AL+YYI RLN+DP W+ I V
Sbjct: 169 DKLSDALKYYIRARLNSDPLWKDINV 194
>gi|403331887|gb|EJY64917.1| 5'-3' exonuclease [Oxytricha trifallax]
Length = 1130
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 260/751 (34%), Positives = 368/751 (49%), Gaps = 102/751 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSD-----SQVFDSNVITPGTE 55
MNQQRSRRFR + D + EE +R ++ +EG K K D S FD NVITPGTE
Sbjct: 132 MNQQRSRRFRGALDTEEREQREEEIRGKWSKEGIKFSQKKDEEDGDSDKFDQNVITPGTE 191
Query: 56 FMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNT 115
FM LS ALQYY+ RL D W+ IKVI SDA+ PGEGEHKI+ ++R QR GY+PNT
Sbjct: 192 FMFRLSKALQYYVMERLQTDSLWKDIKVIFSDASNPGEGEHKILDFIRSQRLQAGYNPNT 251
Query: 116 RHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKA 175
RHC+YG DADLIML L+THE HF+ILRE V + KC CGQ GHL + C+
Sbjct: 252 RHCIYGADADLIMLGLSTHEPHFAILREAVLMDSDK-KCTYCGQNGHLNSECKSNPDIAG 310
Query: 176 GEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGN 235
G P ++ +DF+
Sbjct: 311 G------------------------------------PKVQLSRS---NDFL-------- 323
Query: 236 DFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 295
PH+P+L IREGA++ ++ +YK +LG YLT + +V+ + E+ F
Sbjct: 324 ---PHLPSLHIREGALDAILVIYKNLLPSLGDYLTKNGEIDFGKVDIIFNDIAKIEEESF 380
Query: 296 QKRARLHQRHAERIKREKAQA----------------------RRGDDVEPLAQ-PDSLV 332
+ + +R+AER+ R+ +R + V+ Q P +
Sbjct: 381 KMKKENEERYAERLLRDAQGGNTRGGFRGGRGRGGQRGGYNNQQRPEHVKFDQQLPKTDT 440
Query: 333 PVSRFHGSRLASGPSPSPYQQSEC-------VGRLDNGKGTSGRPHKVPRLSSGATIGAA 385
V L +G + + E LD T V +
Sbjct: 441 EVVLASKVSLTAGAPDAILDKEEIKVEAQEQAKLLDQASVTKPAADSVEEFEKSQIQELS 500
Query: 386 IVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKF 445
++ E E + ++ K +K++L +K+ + DKVK G GWK RYY++KF
Sbjct: 501 KLKQELDEEELNKLASDKMKEIVKKMLSEKNKQMA--DSYIDKVKFGTEGWKLRYYQDKF 558
Query: 446 NAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNI 505
+ + +E T K + Y EGL WV YYY+G SW WFYPYHYAPFASDL + D+ I
Sbjct: 559 HIDVNDFQEFTDK-IKQAYIEGLQWVYSYYYKGCVSWYWFYPYHYAPFASDLVNCDRVKI 617
Query: 506 SFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSW 565
FE+G P +PF QL+GV P S+H +P YR L++ P S I DFYP DF +D+NG RY+W
Sbjct: 618 KFEMGVPAQPFEQLMGVMPKQSAHCIPPCYRHLLSSPKSEIIDFYPIDFRLDINGARYAW 677
Query: 566 QGIAKLPFIDEARLLDEVKKIEH---TLTEEEARRNSIMADMLFVLLSHPLSASI-YTLD 621
G+ LPFID RL+ ++K + LT E RN MLF + +++ TLD
Sbjct: 678 MGVNLLPFIDRQRLIKAMRKADQDGAKLTPIEQDRNRTGTVMLFFARNEKSESALQQTLD 737
Query: 622 EHCK-QLKIKERVEVKERLNPELSDGMNGY-ISPCAGDPHPPVFRSPVASMEDIMGNQVL 679
+ L++ + K++++ + N + I PH + M DI NQV
Sbjct: 738 KKLNGNLELFASFQRKDQISGTVKVLKNAHQIGQKISRPHVKL------QMSDITDNQVY 791
Query: 680 CAIYKLPDAHKHVTRPPAGVIF-PKKIVQLE 709
Y+ P +H+T+ G+ PK++ + E
Sbjct: 792 QINYEHPTYDQHLTKLLDGLKHEPKEVEEFE 822
>gi|222447124|pdb|3FQD|A Chain A, Crystal Structure Of The S. Pombe Rat1-Rai1 Complex
Length = 899
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 278/777 (35%), Positives = 400/777 (51%), Gaps = 89/777 (11%)
Query: 2 NQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPK-SDSQVFDSNVITPGTEFMAVL 60
NQQRSRRFR+S++AA E + +E +++G + + + +DSN ITPGT F L
Sbjct: 116 NQQRSRRFRSSREAALKEEELQAFIEEAKQQGIPIDENATKKKSWDSNCITPGTPFXDTL 175
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ +L+YYI +LN+DP W ++ ILSDA+VPGEGEHKI ++R QR P YDPNT H +Y
Sbjct: 176 AKSLRYYIINKLNSDPCWRNVRFILSDASVPGEGEHKIXEFIRSQRVKPEYDPNTHHVVY 235
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLI L LATHE HF +LRE VF Q G E + K D+
Sbjct: 236 GLDADLIXLGLATHEPHFRVLREDVFF-----------QQGSTKKTKEERLGIK--RLDD 282
Query: 181 KGDEVVVP-KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
+ VP KKP+ +L++ LREYL+ E +PN PF DLE +DD++F FFVGNDFLP
Sbjct: 283 VSETNKVPVKKPFIWLNVSILREYLEVELYVPNLPFPFDLERAIDDWVFFIFFVGNDFLP 342
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF---- 295
H+P+L+IR+GA+ L +++ GGYLT +L R E + AVG+ ED IF
Sbjct: 343 HLPSLDIRDGAVERLTEIWRASLPHXGGYLTLDGSVNLARAEVILSAVGNQEDDIFKRLK 402
Query: 296 QKRARLHQRHAERIKREKAQARRG--DDV--EPLAQPDSLVPVSRFHGSRLASGP----- 346
Q+ R ++ + R +RE Q D+V + + S V+ + + + P
Sbjct: 403 QQEDRRNENYRRRQQRESNQESESYVDNVVIQRSVETQSTEVVTSSKSTSVDTKPPKKTQ 462
Query: 347 ---SPSPYQQSECVGRLDN-GKGTSGRPHKVPRLSS--GATIGAAIVEAENSFETDPQEN 400
+P+P + N G + R R ++ G + AA V + N +
Sbjct: 463 KIDAPAPVDLVNLSEKTSNRSLGATNRELINNRAANRLGLSREAAAVSSVNKLAASALKA 522
Query: 401 KEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEP-----GWKERYYEEKFNAKTPEEREE 455
+ L+ + + S A +S + D ++ P K +K A E E
Sbjct: 523 QLVSNETLQNVPLEDSIASSSAYEDTDSIESSTPVVHPIDTKVSNVGQKRKAPDSTEENE 582
Query: 456 TRKDVVL-------RY-----------TEGLCWVMHYYYEGVC-----------SWQWFY 486
V L RY E + + +Y G+C SW W+Y
Sbjct: 583 NTDTVRLYEPGYRERYYEQKFHISPDEPEKIREAVKHYVHGLCWVLLYYYQGCPSWTWYY 642
Query: 487 PYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPI 546
PYHYAPFA+D KDL ++ FEL PFKP+ QLLGV P+AS + LPE + L TD NS I
Sbjct: 643 PYHYAPFAADFKDLASIDVKFELNQPFKPYEQLLGVLPAASKNNLPEKLQTLXTDENSEI 702
Query: 547 SDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 606
DFYP +F +D+NGK++ WQG+A LPFIDE RLL+ V KI LTEEE++RN + +LF
Sbjct: 703 IDFYPENFTIDLNGKKFEWQGVALLPFIDENRLLNAVSKIYPQLTEEESKRNEDGSTLLF 762
Query: 607 VLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISP-----------CA 655
+ HP E KQL K+R +L+ + + G+ G ++ C
Sbjct: 763 ISEHHP------XFSELVKQLYSKKRQGKPLKLSGKXAHGLFGKVNTNDSVIPNVSVQCP 816
Query: 656 GDPHPPVFRSPVASMEDIMGNQVLCAIYKLPDAH-KHVTRPPAGVIFPKKIVQLEDL 711
D S++D NQ + ++++P +H H + GV P +++ ED+
Sbjct: 817 IDVTSADALQKYGSIDD---NQSISLVFEVPKSHFVHKSXLLRGVKXPNRVLTPEDI 870
>gi|183233323|ref|XP_001913842.1| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
gi|169801637|gb|EDS89385.1| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
Length = 869
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 236/607 (38%), Positives = 335/607 (55%), Gaps = 78/607 (12%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRF+++KDA + AE + +R LP + DSN ITPGTEFM+V+
Sbjct: 105 MNQQRSRRFKSAKDAEN--AELRQAEDNKKRLMNGLPEVPYIKPLDSNCITPGTEFMSVV 162
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S L+ YI R++ W K+ VILSD+ VPGEGEHKIM ++R Q+ P Y+PN HC+Y
Sbjct: 163 SKTLKRYIKERMSQSSYWNKLVVILSDSGVPGEGEHKIMDFIRRQKESPDYNPNIHHCMY 222
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML+LATHE FSI+RE VF + D+C++C H C+ +++ G D
Sbjct: 223 GLDADLIMLSLATHERFFSIVREKVFF--EDDRCYICNGV-HPPDKCQ--RRKEVGAMD- 276
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
++ KP+QFLH LR YL ++ FE C VDDFIF CF VGNDFLPH
Sbjct: 277 ----TII--KPFQFLHCHILRGYLQITLKVEGFEFE---RC-VDDFIFFCFLVGNDFLPH 326
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+L+IR+GA++LLM VY +EF GGY+T+ ++ ++F+Q VG E I +K+
Sbjct: 327 IPSLDIRDGAVDLLMKVY-REFLPHGGYITESGSLNVTNAKNFLQEVGKEEPAILEKKC- 384
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRL 360
++EK A++ D + + +L
Sbjct: 385 ---------QKEKMNAKKNFDNQ---------------------------------MKQL 402
Query: 361 DNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENK--EEFKAKLKELLRDKSDA 418
+ K T +K+ L S + E + +T E K E+ + +LKE L+
Sbjct: 403 EMRKATI---YKINTLKSTEGMNELTPEQQEQLKTQEAEIKLIEQKENRLKERLKKAE-- 457
Query: 419 FNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEG 478
+D +K+GE G+ +RYY KF ++ ++ R D+V Y EG+ WV+ YYY+G
Sbjct: 458 ------TKDLLKMGEVGYTQRYYSVKFKIDPKKDTQKIR-DIVHSYFEGMNWVLGYYYKG 510
Query: 479 VCSWQWFYPYHYAPFASDLKDL--DQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYR 536
SW W+YPY YAPFA D+ + D F ++ PF+PF QL+ V P S LP+ +
Sbjct: 511 CQSWDWYYPYLYAPFAEDMGEYVDDNFEFKYKKSIPFRPFEQLMSVLPPRSKSCLPQQFH 570
Query: 537 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 596
LM SPIS+FYP F++D NG++ ++ I L FID+ +LL VK IE L + R
Sbjct: 571 DLMKSKGSPISEFYPDTFKLDFNGEKVDYKAIVVLTFIDQEKLLHYVKPIEKKLKGDAKR 630
Query: 597 RNSIMAD 603
RN D
Sbjct: 631 RNRRYGD 637
>gi|449709403|gb|EMD48677.1| 5'3' exonuclease domain containing protein [Entamoeba histolytica
KU27]
Length = 869
Score = 394 bits (1012), Expect = e-106, Method: Compositional matrix adjust.
Identities = 238/610 (39%), Positives = 335/610 (54%), Gaps = 84/610 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRK---LPPKSDSQVFDSNVITPGTEFM 57
MNQQRSRRF+++KDA E LRQ + + R LP + DSN ITPGTEFM
Sbjct: 105 MNQQRSRRFKSAKDA-----ENAELRQAEDNKKRLMNGLPEVPYIKPLDSNCITPGTEFM 159
Query: 58 AVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRH 117
+V+S L+ YI R++ W K+ VILSD+ VPGEGEHKIM ++R Q+ P Y+PN H
Sbjct: 160 SVVSKTLKRYIKERMSQSSYWNKLVVILSDSGVPGEGEHKIMDFIRRQKESPDYNPNIHH 219
Query: 118 CLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGE 177
C+YGLDADLIML+LATHE FSI+RE VF + D+C++C H C+ +++ G
Sbjct: 220 CMYGLDADLIMLSLATHERFFSIVREKVFF--EDDRCYICNGV-HPPDKCQ--RRKEVGA 274
Query: 178 FDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDF 237
D ++ KP+QFLH LR YL ++ FE C VDDFIF CF VGNDF
Sbjct: 275 MD-----TII--KPFQFLHCHILRGYLQITLKVEGFEFE---RC-VDDFIFFCFLVGNDF 323
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
LPH+P+L+IR+GA++LLM VY +EF GGY+T+ ++ ++F+Q VG E I +K
Sbjct: 324 LPHIPSLDIRDGAVDLLMKVY-REFLPHGGYITESGSLNVTNAKNFLQEVGKEEPAILEK 382
Query: 298 RARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECV 357
+ ++EK A++ D + +
Sbjct: 383 KC----------QKEKMNAKKNFDNQ---------------------------------M 399
Query: 358 GRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENK--EEFKAKLKELLRDK 415
+L+ K T +K+ L S + E + +T E K E+ + +LKE L+
Sbjct: 400 KQLEMRKATI---YKINTLKSTEGMNELTPEQQEQLKTQEAEIKLIEQKENRLKERLKKA 456
Query: 416 SDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYY 475
+D +K+GE G+ +RYY KF ++ ++ R D+V Y EG+ WV+ YY
Sbjct: 457 E--------TKDLLKMGEVGYTQRYYSVKFKIDPKKDTQKIR-DIVHSYFEGMNWVLGYY 507
Query: 476 YEGVCSWQWFYPYHYAPFASDLKDL--DQFNISFELGHPFKPFNQLLGVFPSASSHALPE 533
Y+G SW W+YPY YAPFA D+ + D F ++ PF+PF QL+ V P S LP
Sbjct: 508 YKGCQSWDWYYPYLYAPFAEDMGEYVDDNFEFKYKKSIPFRPFEQLMSVLPPRSKSCLPY 567
Query: 534 HYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEE 593
+ LM SPIS+FYP F++D NG++ ++ I L FID+ +LL VK IE L +
Sbjct: 568 QFHDLMKSKGSPISEFYPDTFKLDFNGEKVDYKAIVVLTFIDQEKLLHYVKPIEKKLKGD 627
Query: 594 EARRNSIMAD 603
RRN D
Sbjct: 628 AKRRNRRYGD 637
>gi|169776419|ref|XP_001822676.1| exonuclease Kem1 [Aspergillus oryzae RIB40]
gi|83771411|dbj|BAE61543.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1409
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 239/645 (37%), Positives = 337/645 (52%), Gaps = 98/645 (15%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA A+E+ + Q E PK D+ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRARRFRTALDA--EVAKEKAISQGIEM------PKEDA--FDSNCITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+I+ +++ D W+ ++++LS VPGEGEHKIM Y+R + PGYDPN RHCLY
Sbjct: 144 TEQLKYFINKKISEDKDWQGVEIVLSGHEVPGEGEHKIMEYIRHAKAQPGYDPNVRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+Q ++K E +
Sbjct: 204 GLDADLIMLGLLSHDPHFCLLREEV-TFGRQ-------------------VQKKPKELEH 243
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEF----RIPNPPFEIDLECIVDDFIFMCFFVGND 236
+ + LH+ +REYL+ EF R F D+E ++DDFI M FFVGND
Sbjct: 244 QN---------FYLLHLCMVREYLELEFQELERTDVLSFSFDMERVIDDFILMAFFVGND 294
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP++P L I EGA+ L VYK+ +GGY+ + ++ R+ + + E R F+
Sbjct: 295 FLPNLPNLHINEGALAFLFKVYKEILPKMGGYINEQGVINMERLGMLLDGLSDVEFRFFE 354
Query: 297 -----KRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPY 351
+R +++ E + + + P AQ + L V ++ +R P P
Sbjct: 355 AEYSGERWIQAKKNGGENNSESQERPKSFTITP-AQKNLLKEVKKYVLNRPEKAADPQP- 412
Query: 352 QQSECVGRLDNGKGTSGRPHK-VPRLSSGATIGAAIVEAENSFETDPQENKEEF------ 404
LD R K + +L+ + + T+P E+ E F
Sbjct: 413 --------LDFPPTLPARDRKFLEQLADDLRL---------PWTTEPDEHGERFIRFKLP 455
Query: 405 ---------------KAKLKELLRDKSDAFNSDNPEEDKVKLGEPG-------WKERYYE 442
++ ++R +A + ED K E WK +YY
Sbjct: 456 AKQNDDSDDEEDEEASMAVQRIIRKYENAKVQELSAEDAQKAAEKKYEEKFQEWKSKYYT 515
Query: 443 EKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQ 502
KF + EE RK + Y +GL WV++YYY G+ SW WF+ YHYAP SD+K +
Sbjct: 516 GKFEWGL-DNHEEMRK-LTENYVQGLQWVLYYYYRGIASWPWFFQYHYAPMISDVKKGLK 573
Query: 503 FNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKR 562
+ +F+LG PF+P++QL+GV P S +P YR LMT P SPI DFYP DFE+DMNGK+
Sbjct: 574 ADTNFQLGQPFRPYDQLMGVLPDRSKKIVPAAYRDLMTSPESPIVDFYPRDFELDMNGKK 633
Query: 563 YSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
W+ + K+PFI+E RLLD +K EH LT EE RN A + F
Sbjct: 634 MEWEAVVKIPFIEEKRLLDALKTKEHLLTPEEKARNGFGASLKFT 678
>gi|238503103|ref|XP_002382785.1| exonuclease Kem1, putative [Aspergillus flavus NRRL3357]
gi|220691595|gb|EED47943.1| exonuclease Kem1, putative [Aspergillus flavus NRRL3357]
gi|391870653|gb|EIT79830.1| 5'-3' exonuclease XRN1/KEM1/SEP1 involved in DNA strand exchange
and mRNA turnover [Aspergillus oryzae 3.042]
Length = 1409
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 239/645 (37%), Positives = 337/645 (52%), Gaps = 98/645 (15%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA A+E+ + Q E PK D+ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRARRFRTALDA--EVAKEKAISQGIEM------PKEDA--FDSNCITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+I+ +++ D W+ ++++LS VPGEGEHKIM Y+R + PGYDPN RHCLY
Sbjct: 144 TEQLKYFINKKISEDKDWQGVEIVLSGHEVPGEGEHKIMEYIRHAKAQPGYDPNVRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+Q ++K E +
Sbjct: 204 GLDADLIMLGLLSHDPHFCLLREEV-TFGRQ-------------------VQKKPKELEH 243
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEF----RIPNPPFEIDLECIVDDFIFMCFFVGND 236
+ + LH+ +REYL+ EF R F D+E ++DDFI M FFVGND
Sbjct: 244 QN---------FYLLHLCMVREYLELEFQELERTDVLSFSFDMERVIDDFILMAFFVGND 294
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP++P L I EGA+ L VYK+ +GGY+ + ++ R+ + + E R F+
Sbjct: 295 FLPNLPNLHINEGALAFLFKVYKEILPKMGGYINEQGVINMERLGMLLDGLSDVEFRFFE 354
Query: 297 -----KRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPY 351
+R +++ E + + + P AQ + L V ++ +R P P
Sbjct: 355 AEYSGERWIQAKKNGGENNSESQERPKSFTITP-AQKNLLKEVKKYVLNRPEKAADPQP- 412
Query: 352 QQSECVGRLDNGKGTSGRPHK-VPRLSSGATIGAAIVEAENSFETDPQENKEEF------ 404
LD R K + +L+ + + T+P E+ E F
Sbjct: 413 --------LDFPPTLPARDRKFLEQLADDLRL---------PWTTEPDEHGERFIRFKLP 455
Query: 405 ---------------KAKLKELLRDKSDAFNSDNPEEDKVKLGEPG-------WKERYYE 442
++ ++R +A + ED K E WK +YY
Sbjct: 456 AKQNDDSDDEEDEEASMAVQRIIRKYENAKVQELSAEDAQKAAEKKYEEKFQEWKSKYYT 515
Query: 443 EKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQ 502
KF + EE RK + Y +GL WV++YYY G+ SW WF+ YHYAP SD+K +
Sbjct: 516 GKFEWGL-DNHEEMRK-LTENYVQGLQWVLYYYYRGIASWPWFFQYHYAPMISDVKKGLK 573
Query: 503 FNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKR 562
+ +F+LG PF+P++QL+GV P S +P YR LMT P SPI DFYP DFE+DMNGK+
Sbjct: 574 ADTNFQLGQPFRPYDQLMGVLPDRSKKIVPAAYRDLMTSPESPIVDFYPRDFELDMNGKK 633
Query: 563 YSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
W+ + K+PFI+E RLLD +K EH LT EE RN A + F
Sbjct: 634 MEWEAVVKIPFIEEKRLLDALKTKEHLLTPEEKARNGFGASLKFT 678
>gi|320586314|gb|EFW98993.1| RasGAP [Grosmannia clavigera kw1407]
Length = 3016
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 268/772 (34%), Positives = 381/772 (49%), Gaps = 136/772 (17%)
Query: 1 MNQQRSRRFRASKDA-ADSAAEEERLRQEFEREGRKLPPKS----DSQVFDSNVITPGTE 55
MNQQRSRRFR++++A ++E L+ ++ G LP ++ + FDSN ITPGT
Sbjct: 112 MNQQRSRRFRSAQEAQEKEEDKKELLKLLKQQNGGVLPTETLETAAKKAFDSNSITPGTP 171
Query: 56 FMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNT 115
FM +L+ +L+Y+
Sbjct: 172 FMDILAASLRYW------------------------------------------------ 183
Query: 116 RHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRK 174
H +YGLDADLIML+LATHE +F +LRE V F + C LCGQ GH A+ C+G+ K K
Sbjct: 184 -HVIYGLDADLIMLSLATHEPYFRVLREDVFFQDSKARTCRLCGQKGHEASACKGEVKEK 242
Query: 175 AGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVG 234
GEFDEK E P KP+ +LH+ LREYL E +P PF DLE +DD+IF+C FVG
Sbjct: 243 DGEFDEKDKEH--PLKPFIWLHVSVLREYLAVELDVPGLPFRWDLERAIDDWIFLCCFVG 300
Query: 235 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI 294
NDFLPH+P LEIRE IN L ++K + + GY+T L R ++ + + ED I
Sbjct: 301 NDFLPHLPALEIRENGINTLTGLWKDNLQYMNGYVTKDGHVDLERAQYIMSGLAKQEDGI 360
Query: 295 FQKRARLHQRHAERIKREK----------------------AQARRGDDVEPLA----QP 328
F++R + R E KR + A++ G + P+A +P
Sbjct: 361 FRRRKQQEDRREENAKRRRLQEKNGRGNPRNSDKPGGDRRFAESTAGLHLHPIANFPQKP 420
Query: 329 ------DSLVPVSRFHGSRLAS---------------GPSPSPYQQSECVGRLDNGKGTS 367
D +V S + +A+ G S S +E N K +
Sbjct: 421 TPSVTYDMVVNRSAVQEANVANKSAAAVLRDRILAAQGESKSETPSTETDSPTANDKVEA 480
Query: 368 GRPHKVPRLSSGATIG---AAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNP 424
G SS A +G AA++EAE E+ P KA S+
Sbjct: 481 GTATTAEG-SSLAALGKRKAALMEAEGGGESTPASGASTPKA------------VASEEG 527
Query: 425 EEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQW 484
D V++ + G+ RYYE+KF+ P + E R V Y EGL WV+ YY++G SW+W
Sbjct: 528 PVDTVRMWDEGYANRYYEQKFHVD-PRD-VEFRHGVARSYVEGLAWVLLYYFQGCPSWEW 585
Query: 485 FYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNS 544
+YPYHYAPFA+D DL + ++ F+ G +PF QL+ V P+AS HA+PE + LMT+ +S
Sbjct: 586 YYPYHYAPFAADFVDLGKMDLVFQKGRISRPFEQLMSVLPAASRHAIPEIFHDLMTNEDS 645
Query: 545 PISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADM 604
I DFYP DF++D+NGK+++WQG+A LPFID RLL V+K L+ E+ RN +
Sbjct: 646 EIIDFYPVDFDIDLNGKKFAWQGVALLPFIDMKRLLAAVEKKYPLLSPEDQVRNGV--GK 703
Query: 605 LFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCA-----GDPH 659
+ +LLS A+ DE K + +LNP +S G+ G + G
Sbjct: 704 VVMLLS---DANTELYDEITGHFYSKRQGTTNFKLNPRISAGLAGMVEKMEDYIPHGSLV 760
Query: 660 PPVFRSPVASMEDIMGNQVLCAIYKLP-DAHKHVTRPPAGVIFPKKIVQLED 710
P+ RS + DI ++ L IY P +H H + G P ++ D
Sbjct: 761 YPLDRS---AFPDIEYDRSLTVIYDFPATSHSHKSMLLRGAKLPSPVLTRND 809
>gi|156084528|ref|XP_001609747.1| XRN 5'-3' exonuclease protein [Babesia bovis T2Bo]
gi|154796999|gb|EDO06179.1| XRN 5'-3' exonuclease protein, putative [Babesia bovis]
Length = 988
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 239/617 (38%), Positives = 334/617 (54%), Gaps = 72/617 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRF+++ +A A ++ EF + ++PPK +DSNVITPGT FM L
Sbjct: 114 MNQQRSRRFKSAAEADLEAEIYSKVAAEFAQRNVRIPPKESR--WDSNVITPGTPFMHEL 171
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S + YI R + W +I VI SDAN PGEGEHKIM+++R QR+ YDPNT+H L+
Sbjct: 172 SKRVVAYIKERRDMYEAWSRIHVIYSDANSPGEGEHKIMNFIRNQRHSDQYDPNTKHVLH 231
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G+DADLIML LATHEV+F I+RE+V K + + + D
Sbjct: 232 GMDADLIMLGLATHEVNFYIIREIVSNLNPTKKA-----EDEIRKSIAVAQTSRPQLKDI 286
Query: 181 KGDEVVVPK--KPYQFLHIWTLREYLDYEFRIPNPPFE-----IDLECIVDDFIFMCFFV 233
K ++ + KP QFL + LREYL ++ P ID E +DD + MCFF
Sbjct: 287 KSYRSMLRQNWKPLQFLRLPVLREYLSHQLYFPRGWSRGNSGPIDFERCIDDLVLMCFFC 346
Query: 234 GNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDR 293
GNDFLPH+P++ I+ G+I+ ++ +Y+ LG YLT+ + + ++ F+ + + ED+
Sbjct: 347 GNDFLPHLPSISIQGGSIDQMILLYQSLLPDLGDYLTNEGEINFPQLGAFVSYIANVEDQ 406
Query: 294 IFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQ 353
+F+ QR ++++R + GD+ E Q VSR P+ +
Sbjct: 407 VFKAEQEFKQR--QKMRRLQHS---GDNTENKDQ------VSR-----------PTDF-- 442
Query: 354 SECVGRLDNGKG-TSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELL 412
DN G T + L++G I EFK + ELL
Sbjct: 443 -------DNAGGETVLKNQDSSTLNNGLEI--------------------EFKKRCAELL 475
Query: 413 RDKSDAFNSDNPEE-DKVKLGEP-GWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCW 470
+ + + D+P E + L +P WKE YY +KF ++ E V Y +G+CW
Sbjct: 476 KQEREV---DDPVEPIDLSLNDPVRWKETYYRKKFGLCESQDVWEFASQVANHYIKGMCW 532
Query: 471 VMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHA 530
V+ YYY+G SW W+YP+HYAPF SDL + + +F+ G PF PF QL+ V P SSH
Sbjct: 533 VLRYYYQGCTSWGWYYPFHYAPFCSDL-NFEGLEFTFDYGKPFTPFQQLMSVMPIRSSHC 591
Query: 531 LPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTL 590
LPE R LMTD +SPI+DFYP F+ D NGKRY +Q +A LPFIDE +LL+ V IE L
Sbjct: 592 LPEQLRHLMTDTDSPIADFYPIKFDEDPNGKRYKYQWVALLPFIDEKKLLNLVIPIEAIL 651
Query: 591 TEEEARRNSIMADMLFV 607
+E RNS DMLF
Sbjct: 652 PKELQDRNSEKKDMLFA 668
>gi|440632608|gb|ELR02527.1| 5'-3' exoribonuclease 1 [Geomyces destructans 20631-21]
Length = 1388
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 240/642 (37%), Positives = 341/642 (53%), Gaps = 94/642 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + D E R++ REG+++P + + FDSN ITPGTEFMA L
Sbjct: 94 MNQQRARRFRTALDV-------ENAREKAIREGKEMPKE---EAFDSNCITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+I+ +++ D W+ ++++LS VPGEGEHKIM Y+RL + P YD N RHCLY
Sbjct: 144 TEQLKYFINKKVSEDTDWQGVEIVLSGHEVPGEGEHKIMEYIRLSKAQPDYDHNVRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+Q K K+ E +
Sbjct: 204 GLDADLIMLGLLSHDPHFCLLREEV-TFGRQSKA-------------------KSKELEH 243
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGND 236
+ + +H+ +REYL+ EF+ P F DLE ++DDFI M FFVGND
Sbjct: 244 QN---------FYLMHLCIVREYLEIEFQELKEPGIMGFAFDLERVIDDFILMAFFVGND 294
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP++P L I EGA+ L+ +YK GGYL +G ++ R+ ++ + E R F+
Sbjct: 295 FLPNLPNLHINEGALALMFKIYKSVLPKAGGYLNEGGVINMPRLAILLEELSHVEYRFFE 354
Query: 297 KR---ARLHQ--RHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPY 351
A+ + + A+ EK R+G V AQ D V F +R SP P
Sbjct: 355 SENSDAKWFKGKQMAKVDVMEKGSRRKGKVVMTSAQKDVWKLVKIFVNNR-----SPEP- 408
Query: 352 QQSECVGRLDNGKGTSGRPHK-VPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKE 410
LD + K V L+ + VE EN + + F AKL++
Sbjct: 409 --------LDLPSSLPAKDRKFVEDLADSLHLDWKTVEDENG----DRHLQISFPAKLEQ 456
Query: 411 ---------------LLRDKSDAFNSD----NPEEDKVKLGEP------GWKERYYEEKF 445
+LR N++ + EE + ++ + WK++YY+ KF
Sbjct: 457 DDDEEEEQDEESQLAILRVVKQYDNANIVDVSAEEAQAEMDKKYEEKFQEWKDKYYDGKF 516
Query: 446 NAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNI 505
K E E T+ + Y +GL WV++YYY+GV SW W+Y YHY+P SD+ + +I
Sbjct: 517 EWKRDNETELTK--LAENYVQGLQWVLYYYYQGVVSWPWYYAYHYSPMISDVIKGLKADI 574
Query: 506 SFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSW 565
+F+LG PF P+ QL+GV P S +P Y +LMTDP SPI DFYP DFE+DMNGK+ W
Sbjct: 575 NFKLGQPFHPYEQLMGVLPDRSKKIVPTVYHELMTDPKSPIIDFYPRDFELDMNGKKMEW 634
Query: 566 QGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
+ + K+PFIDE RLL + L++ E RN + F
Sbjct: 635 EAVVKIPFIDEKRLLSAMAPKNDMLSDAEKARNEFGVSLKFT 676
>gi|406702486|gb|EKD05502.1| hypothetical protein A1Q2_00263 [Trichosporon asahii var. asahii
CBS 8904]
Length = 1568
Score = 388 bits (996), Expect = e-104, Method: Compositional matrix adjust.
Identities = 249/650 (38%), Positives = 337/650 (51%), Gaps = 101/650 (15%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR ++DA + R+E R+G LP + + FDSN ITPGT FMA L
Sbjct: 35 MNQQRSRRFRTARDAREK-------REEALRKGETLP---EEKAFDSNCITPGTPFMARL 84
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S L+YY+ R++ D W +KVILS VPGEGEHKIM ++R + PGY+PNTRHCLY
Sbjct: 85 SEHLKYYVRKRISEDAEWRGVKVILSGHEVPGEGEHKIMDFIRKTKAQPGYNPNTRHCLY 144
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADL+ML L +H+ HFS+LRE V T G+ KAK+
Sbjct: 145 GLDADLVMLGLISHDPHFSLLREEV-TFGR-------------------KAKKN------ 178
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFL 238
V + LH+ LREYLD EF+ + FE DLE I+DD+I M FFVGNDFL
Sbjct: 179 ----VSLANSNMFLLHLSLLREYLDMEFQSVAESISFEYDLERIIDDWILMGFFVGNDFL 234
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 298
PH+P L I EGA+ + +YK+ GGYL D SL R++ + + YE + F++
Sbjct: 235 PHLPGLHINEGALETIWKIYKEILPQAGGYLNDKGTISLPRLQLLLDKLSEYEKQRFEEE 294
Query: 299 ---ARLHQ--RHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPS---- 349
A + R E EKA+ ++G + Q L + F ++ S PS
Sbjct: 295 YMDANWFKGSREKEIAALEKAK-KKGKLIITKDQAKILKQIQTFV-TKYQSRPSSKDRLE 352
Query: 350 -----PYQQSECVGRLDNGKGTSGR-----PHKVPRLSSGATIGAAIVEAENSFETDPQE 399
P + + V L + + P + G + A E + +T+ QE
Sbjct: 353 IVNTLPERDRKFVQELADNLNLRCTWDEEDSYGQPLIVLGFNVDPADDRPEKTEKTEGQE 412
Query: 400 NKE---------------EFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEK 444
+ E E +A + + A DN ED E YE+K
Sbjct: 413 DGEDAEESEGEWESEEDLESQAAIARVFNKYDKAKVVDNDIEDF---------ETSYEDK 463
Query: 445 FNAKTPE--------------EREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHY 490
N K E + +E +V RY EGL W+++YYY+GV +W WFY YHY
Sbjct: 464 LNEKLVETKKKYYKEKLDINWDNKEELHPIVYRYIEGLQWILYYYYKGVPAWGWFYNYHY 523
Query: 491 APFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFY 550
AP SDLKD+ F F++G PF PF QL+GV P+ S +P+ YR LM + SPI DFY
Sbjct: 524 APMISDLKDIASFKFDFDIGKPFLPFQQLMGVLPADSQEHVPQAYRDLMYEDTSPIIDFY 583
Query: 551 PTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSI 600
P F++DMNGK+ W+ + K+PFI+E RLL + + E LT EE RN +
Sbjct: 584 PKIFDLDMNGKKQDWEAVVKIPFINEDRLLRTMAQREQRLTPEEKGRNRV 633
>gi|378727731|gb|EHY54190.1| phosphodiesterase/alkaline phosphatase D [Exophiala dermatitidis
NIH/UT8656]
Length = 1413
Score = 388 bits (996), Expect = e-104, Method: Compositional matrix adjust.
Identities = 242/648 (37%), Positives = 346/648 (53%), Gaps = 100/648 (15%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA E+ R++ +EG ++P K D FDSN ITPGTEFMA L
Sbjct: 94 MNQQRARRFRTALDA-------EKAREKAIKEGLEMP-KEDP--FDSNCITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+I +++ D W+ ++V+LS VPGEGEHKIM Y+R + PGYDPN RHCLY
Sbjct: 144 TKQLKYFISKKVSEDVDWQGVEVVLSGHEVPGEGEHKIMEYIRQAKAQPGYDPNVRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+Q A +K+ E +
Sbjct: 204 GLDADLIMLGLLSHDPHFCLLREEV-TFGRQ-------------------ATKKSKELEH 243
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGND 236
+ + LH+ +REYL+ EF+ P F D+E I+DDFI M FFVGND
Sbjct: 244 QN---------FYLLHLCIVREYLELEFQELEQPGALSFPFDMERIIDDFILMAFFVGND 294
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP++P L I EGA+ L+ YK+ +GGY+ + +L R+ + A+ E R F+
Sbjct: 295 FLPNLPNLHINEGALALMFQKYKEVLPKMGGYINEQGVINLERLGVLLDALSEVEYRFFE 354
Query: 297 KRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSEC 356
+E + A+R + D+L P + GP +Q +
Sbjct: 355 ---------SEYADAKWINAKRNAQLNDENGEDTLKP---------SRGPVRISPEQKKL 396
Query: 357 VGRLD-------NGKGTSGRPHKVP------------RLSSGATIGAAIVEAE--NSF-- 393
+ N + +P K+P +L++ + + E E N F
Sbjct: 397 FKEVKKYFIAPANKDPATWQPLKLPPTLPARDRKFIEQLATDLNLRWSTQEDEEGNRFIQ 456
Query: 394 --------ETDPQENKEEFKAKLKELLR---DKSDAFNSDNPEEDKVKLGEPG---WKER 439
+ D +E++E A + L R K + + ++D K + WK++
Sbjct: 457 LEFPPTDKDADSEEDEEAQLAVTRVLKRYENAKVEDVTDEQTQQDMKKKYDAKFLEWKDK 516
Query: 440 YYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKD 499
YY EKF+ + EE RK + Y +GL WV+ YYY G+ SW WFY YHY+P SD+K
Sbjct: 517 YYREKFDWGL-DNDEELRK-LAENYVQGLQWVLFYYYRGIASWPWFYQYHYSPMISDIKK 574
Query: 500 LDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMN 559
+++F+LG PFKPF QL+GV P S +PE Y +LMT +SPI DFYP DFE+DMN
Sbjct: 575 GLGADLNFQLGQPFKPFQQLMGVLPDRSKKIVPEVYHELMTSKDSPIIDFYPRDFELDMN 634
Query: 560 GKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
GK+ W+ + K+PFIDE RLL ++ + L+E+E RN + FV
Sbjct: 635 GKKMEWEAVVKIPFIDEKRLLKAMEPKDALLSEDERVRNDFGVSLKFV 682
>gi|449482933|ref|XP_004156447.1| PREDICTED: 5'-3' exoribonuclease 4-like, partial [Cucumis sativus]
Length = 685
Score = 388 bits (996), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/376 (51%), Positives = 248/376 (65%), Gaps = 14/376 (3%)
Query: 381 TIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERY 440
IG + +A + QEN EE + + + + + P DK+KLGEPG+KERY
Sbjct: 124 AIGGYLTDA-----GEAQENNEEMRGRAR-----RENGPPPPPPTVDKIKLGEPGYKERY 173
Query: 441 YEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDL 500
Y EKFNA P E ++DVVL+Y EGLCWV YYY GVCSWQW+YPYHY+PFASDLK+L
Sbjct: 174 YAEKFNA-NPANIAEIKQDVVLKYVEGLCWVCRYYYSGVCSWQWYYPYHYSPFASDLKNL 232
Query: 501 DQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNG 560
I+F +G PFKPF+QL+G P+ASS ALPE YR LMTDP+SPI +FYP+DFE+DMNG
Sbjct: 233 ADLEITFFIGEPFKPFDQLMGTLPAASSTALPEKYRNLMTDPSSPILEFYPSDFEIDMNG 292
Query: 561 KRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTL 620
KR+ WQG+AKLPFIDE +LL + +++E +LT+EE RNS+M DML+ +HPLSA I++
Sbjct: 293 KRFQWQGVAKLPFIDERKLLAQTRRLEWSLTDEEKNRNSVMLDMLYTHCTHPLSAQIFSY 352
Query: 621 DEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSPVASMEDIMGNQVLC 680
+ QL R ++ S GMNGY+ C + V +SP+ S+ DI NQVL
Sbjct: 353 YQVASQLPPHAR--TCWVIDTNASGGMNGYLWLCERNVIRNVVQSPINSLPDIQCNQVLN 410
Query: 681 AIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKPAPVLWHED-SGRRPHENGRHNPHGTIS 739
Y P HKH+ PP G I PKK++ D+KP P LWHED S RR H R G I+
Sbjct: 411 VTYLNPQKHKHIPEPPKGAIIPKKVLSSLDIKPFPTLWHEDNSSRRSHGRDRPRVPGAIA 470
Query: 740 GRQLGEAAHRLVANSL 755
G LGEAAHRLV N+L
Sbjct: 471 GPLLGEAAHRLVKNTL 486
Score = 192 bits (487), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 89/137 (64%), Positives = 107/137 (78%), Gaps = 4/137 (2%)
Query: 139 SILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKG-DEVVVPKKPYQFLHI 197
+++ +V+ PGQQ+KC+ CG+ GHLAA C GK+ G D G DE + KK YQFL+I
Sbjct: 1 TLVVQVIMLPGQQEKCYNCGKVGHLAAECRGKSD---GPEDWNGADETPIHKKKYQFLNI 57
Query: 198 WTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAV 257
W LREYL YE IPNPPFEI+ E IVDDF+F+CFFVGNDFLPHMPTLEIREGAINLLM +
Sbjct: 58 WVLREYLQYELDIPNPPFEINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHI 117
Query: 258 YKKEFRALGGYLTDGSK 274
Y+KEF A+GGYLTD +
Sbjct: 118 YRKEFPAIGGYLTDAGE 134
>gi|50550657|ref|XP_502801.1| YALI0D13750p [Yarrowia lipolytica]
gi|74634562|sp|Q6C961.3|XRN2_YARLI RecName: Full=5'-3' exoribonuclease 2
gi|49648669|emb|CAG80989.1| YALI0D13750p [Yarrowia lipolytica CLIB122]
Length = 1010
Score = 387 bits (995), Expect = e-104, Method: Compositional matrix adjust.
Identities = 240/668 (35%), Positives = 349/668 (52%), Gaps = 94/668 (14%)
Query: 1 MNQQRSRRFRASKDAA---DSAAEEERLRQEFEREGRKLPPKSDSQV------------- 44
MNQQR+RRFR++KDAA +S E E + E + KS +
Sbjct: 111 MNQQRARRFRSAKDAAIEAESTLESELKAKTIELQSSGEKGKSLETILDEFKQGLVNKPG 170
Query: 45 -FDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVR 103
+DSN ITPGT FM L+ AL+Y++ +LN +PGW +KV++SDA VPGEGEHKIM ++R
Sbjct: 171 KWDSNAITPGTPFMEKLAAALRYWVGYKLNTEPGWRDLKVVISDATVPGEGEHKIMEFIR 230
Query: 104 LQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHL 163
QR P Y+ NT HC+YGLDADLI L LATHE F +LRE VF +Q+K GH
Sbjct: 231 SQRGDPTYNANTSHCIYGLDADLIFLGLATHEPKFKLLREDVF---RQNKT-----AGH- 281
Query: 164 AANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEI--DLEC 221
KKP+ +L+I LREYL + R +P +I DLE
Sbjct: 282 ------------------------QKKPFIWLNIDILREYLREDLRFTHPQTKIPFDLER 317
Query: 222 IVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVE 281
+DD++F+CFFVGNDFLPH+P ++R+G+IN+L+ +K Y+T +L + +
Sbjct: 318 AIDDWVFLCFFVGNDFLPHLPACDVRDGSINVLVNQWKNGMTRWKDYITCDGHVNLAQAQ 377
Query: 282 HFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSR 341
++ + E RI +HQ +R++ EK+QA + + L R G +
Sbjct: 378 DLLKNFATQEQRIL-----VHQEQ-DRVEYEKSQANKAAKQQAHRDSKKL----RQQGEQ 427
Query: 342 LASGPSPSPYQQSECVGRLD-NGKGTSGRPHKVP---------------RLSSGATIGAA 385
A P + E VG + + G+ + + L G+ GA
Sbjct: 428 AALESMPLYDTKGESVGDVQLTNRELVGQRNDITLANLANQDAADKLRFMLKRGSDTGAE 487
Query: 386 IVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSD--NPE---------EDKVKLGEP 434
E +P+E E ++ + S A ++D NP D V+ +
Sbjct: 488 EPAKRAKIEEEPKE-AESNSSEATPPTANPSIANDADLSNPNVTVHETTGYADHVQFHKS 546
Query: 435 GWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA 494
G+ ERYY KF+AK +E + R+ V Y +G+CWV+ YYY G SW WFYPYHYAP A
Sbjct: 547 GYTERYYMNKFHAKE-DEVDNLRRQVAEEYMKGVCWVLMYYYHGCQSWSWFYPYHYAPLA 605
Query: 495 SDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDF 554
D + + F PF+P+ QL+ V P+AS H LP +R LM++ NSPI D+YP +F
Sbjct: 606 GDFDQISNMKVEFGESAPFRPYEQLMSVLPAASGHNLPAVFRPLMSEENSPIIDYYPENF 665
Query: 555 EVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLS 614
++D+NGK+ W+ + LPFI+ LL+ V+ LT EE RN++ + +++ H L
Sbjct: 666 QLDLNGKKQEWKAVVLLPFINADHLLEHVQAKYTELTPEEKDRNTLREE---IVIFHRLG 722
Query: 615 ASIYTLDE 622
TL++
Sbjct: 723 KYAKTLEK 730
>gi|401883118|gb|EJT47352.1| hypothetical protein A1Q1_03823 [Trichosporon asahii var. asahii
CBS 2479]
Length = 1499
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 249/650 (38%), Positives = 337/650 (51%), Gaps = 101/650 (15%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR ++DA + R+E R+G LP + + FDSN ITPGT FMA L
Sbjct: 35 MNQQRSRRFRTARDAREK-------REEALRKGETLP---EEKAFDSNCITPGTPFMARL 84
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S L+YY+ R++ D W +KVILS VPGEGEHKIM ++R + PGY+PNTRHCLY
Sbjct: 85 SEHLKYYVRKRISEDAEWRGVKVILSGHEVPGEGEHKIMDFIRKTKAQPGYNPNTRHCLY 144
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADL+ML L +H+ HFS+LRE V T G+ KAK+
Sbjct: 145 GLDADLVMLGLISHDPHFSLLREEV-TFGR-------------------KAKKN------ 178
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFL 238
V + LH+ LREYLD EF+ + FE DLE I+DD+I M FFVGNDFL
Sbjct: 179 ----VSLANSNMFLLHLSLLREYLDMEFQSVAESISFEYDLERIIDDWILMGFFVGNDFL 234
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 298
PH+P L I EGA+ + +YK+ GGYL D SL R++ + + YE + F++
Sbjct: 235 PHLPGLHINEGALETIWKIYKEILPQAGGYLNDKGTISLPRLQLLLDKLSEYEKQRFEEE 294
Query: 299 ---ARLHQ--RHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPS---- 349
A + R E EKA+ ++G + Q L + F ++ S PS
Sbjct: 295 YMDANWFKGSREKEIAALEKAK-KKGKLIITKDQAKILKQIQTF-VTKYQSRPSSKDRLE 352
Query: 350 -----PYQQSECVGRLDNGKGTSGR-----PHKVPRLSSGATIGAAIVEAENSFETDPQE 399
P + + V L + + P + G + A E + +T+ QE
Sbjct: 353 IVNTLPERDRKFVQELADNLNLRCTWDEEDSYGQPLIVLGFNVDPADDRPEKTEKTEGQE 412
Query: 400 NKE---------------EFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEK 444
+ E E +A + + A DN ED E YE+K
Sbjct: 413 DGEDAEESEGEWESEEDLESQAAIARVFNKYDKAKVVDNDIEDF---------ETSYEDK 463
Query: 445 FNAKTPE--------------EREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHY 490
N K E + +E +V RY EGL W+++YYY+GV +W WFY YHY
Sbjct: 464 LNEKLVETKKKYYKEKLDINWDNKEELHPIVYRYIEGLQWILYYYYKGVPAWGWFYNYHY 523
Query: 491 APFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFY 550
AP SDLKD+ F F++G PF PF QL+GV P+ S +P+ YR LM + SPI DFY
Sbjct: 524 APMISDLKDIASFKFDFDIGKPFLPFQQLMGVLPADSQEHVPQAYRDLMYEDTSPIIDFY 583
Query: 551 PTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSI 600
P F++DMNGK+ W+ + K+PFI+E RLL + + E LT EE RN +
Sbjct: 584 PKIFDLDMNGKKQDWEAVVKIPFINEDRLLRTMAQREQRLTPEEKGRNRV 633
>gi|213407328|ref|XP_002174435.1| 5'-3' exoribonuclease [Schizosaccharomyces japonicus yFS275]
gi|212002482|gb|EEB08142.1| 5'-3' exoribonuclease [Schizosaccharomyces japonicus yFS275]
Length = 1322
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 227/614 (36%), Positives = 328/614 (53%), Gaps = 51/614 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR +KDA D+ R++ ER G + FDSN ITPGT FM +
Sbjct: 94 MNQQRSRRFRTAKDAYDA-------RRKAERNGEVIAEDP----FDSNCITPGTVFMQRI 142
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S L Y+I +++ D W +++ILS + PGEGEHKIM Y+R Q+ P Y+PNTRHCLY
Sbjct: 143 SEQLHYFIQKKVSEDSDWSGVQIILSGHDCPGEGEHKIMEYIRTQKAQPNYNPNTRHCLY 202
Query: 121 GLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADLIML L +H+ HF +LRE V F P ++ +A+ E
Sbjct: 203 GLDADLIMLGLLSHDPHFCLLREEVTFGPARK------------SASKE----------- 239
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDF 237
+ + + LH+ LREYL+ EF N PF DLE I+DDFI + FFVGNDF
Sbjct: 240 -------LANQKFYLLHLSLLREYLEAEFEECRDNLPFAYDLERIIDDFILLAFFVGNDF 292
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
LP++P L I EGA+ L+ VYK + GY+ + ++ R++ + + +E +F++
Sbjct: 293 LPNLPGLHINEGALALMFNVYKSVLPLMEGYINEAGVINMDRLDLVLLELEKFEKAVFKE 352
Query: 298 RARLHQRHAERIKREKAQARRGDDVEP----LAQPDSLVPVSRFHGSRLASGPSPSPYQQ 353
E + Q R ++ +P + Q + + +F SR +
Sbjct: 353 ECYSSNADGEAPAFDFNQFLRNNNKDPSYLTVKQKELYCLLKKFLYSR-EQYLDITDKLS 411
Query: 354 SECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLR 413
SE L G + G++ + N +++ + +++ ++ E
Sbjct: 412 SEDTRFLRRLASKLGLMASTVVFADGSSCLRVAFKNLNFSDSEEDDEEQDEIGEVLEKFD 471
Query: 414 DKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMH 473
+ N+ E+K + G WK+ YY K +E+E + + RY EGL WV+
Sbjct: 472 KLNIIDNTTKDSEEKFEKGFEMWKDNYYRSKVGFSYYDEKE--LEQMAKRYVEGLQWVLF 529
Query: 474 YYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPE 533
YYY G SW WFY YHY+P SD++ +F I+F++G PF+PF QL+ V P+ S +P
Sbjct: 530 YYYRGCQSWGWFYDYHYSPKISDVRRGLRFGITFDMGKPFRPFEQLMAVLPARSKSLVPP 589
Query: 534 HYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEE 593
YR LMTDPNSPI DFYP +FE+D N K+ SW+ + K+PFI+E RL D +K EH LT
Sbjct: 590 CYRDLMTDPNSPIIDFYPENFELDQNEKKASWEAVVKIPFIEETRLQDALKSREHLLTAA 649
Query: 594 EARRNSIMADMLFV 607
E RN +LF+
Sbjct: 650 ELHRNEFHPPVLFI 663
>gi|407925965|gb|EKG18938.1| Putative 5-3 exonuclease [Macrophomina phaseolina MS6]
Length = 1429
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 232/628 (36%), Positives = 344/628 (54%), Gaps = 63/628 (10%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR ++DA E R++ REG ++P + FDSN ITPGTEFMA L
Sbjct: 94 MNQQRARRFRTARDA-------EEAREKAIREGVEMPAEP---AFDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+I+ +++ D W+ ++++LS VPGEGEHKIM Y+R ++ PGYDPN RHCLY
Sbjct: 144 TQHLKYFINKKVSEDVDWQGVEIVLSGHEVPGEGEHKIMEYIRQAKSQPGYDPNVRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+Q +++K+ E +
Sbjct: 204 GLDADLIMLGLLSHDPHFCLLREEV-TFGRQ-------------------SQKKSKELEH 243
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGND 236
+ + +H+ +REYL+ EF+ P F D+E ++DDFI M FFVGND
Sbjct: 244 QN---------FYLMHLCIVREYLELEFQELEQPGALDFPFDMERVIDDFILMAFFVGND 294
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP++P L I EGA+ L+ VYKK GY+ +G +L R+ + + E R F+
Sbjct: 295 FLPNLPHLHINEGALALMFGVYKKVLPKAKGYINEGGVINLERLALLLDELSHVEYRFFE 354
Query: 297 -KRARLHQRHAERIKREKAQAR---RGDDVEPLAQPDSLVPVSRFHGSRLASG------- 345
+ A +++ RE R RG V Q D + ++ +R +SG
Sbjct: 355 SENADASWFKGKQMGREDVMERTKKRGKIVMTTGQKDIYKRIRQYVNNRPSSGEGEPLDL 414
Query: 346 PSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFK 405
P P + V L + + + + + A ++ + + +E++E
Sbjct: 415 PPTLPASDRKFVEDLADSLHLQWKTVEDDQGERHLQV-AFPPSLKDDDDGEEEEDEEAQN 473
Query: 406 AKLKELLRDKSDAFNSDNPEEDKVKLGEP------GWKERYYEEKFNAKTPEEREETRKD 459
A L+ L R + +P+E + ++ + WK+ YY+ K ++EE RK
Sbjct: 474 AILRVLKRYDNAQIEDISPDEAQAEMKKKYDEKFNSWKDNYYKSKLEWGL-NDKEELRK- 531
Query: 460 VVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQL 519
+ Y +GL WV+ YYY GV SW W+Y YHYAP SD+K+ + +++F+LG PF+P+ QL
Sbjct: 532 MTENYVQGLQWVLFYYYRGVASWPWYYGYHYAPMISDVKEGLKADLNFKLGQPFRPYQQL 591
Query: 520 LGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARL 579
+GV P S +P Y +LMT SPI DFYP DFE+DMNGK+ W+ + K+PFIDE RL
Sbjct: 592 MGVLPDRSKSIVPAAYHELMTQKESPIIDFYPRDFELDMNGKKMDWEAVVKIPFIDEKRL 651
Query: 580 LDEVKKIEHTLTEEEARRNSIMADMLFV 607
L + +H LT+ E RN + F
Sbjct: 652 LPAMATKDHLLTQGERDRNEFGVTLKFT 679
>gi|397628044|gb|EJK68715.1| hypothetical protein THAOC_10078 [Thalassiosira oceanica]
Length = 1579
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 234/609 (38%), Positives = 314/609 (51%), Gaps = 107/609 (17%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
+NQQRSRRFR++KD A++ E +RLR +G P + FDSN ITPGTEF+ +
Sbjct: 153 LNQQRSRRFRSAKDLAEATKEAQRLR---PIDGAD--PDPYAGAFDSNCITPGTEFLLRI 207
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S ++Y+I ++ DP W + VI S VPGEGEHKIM ++R RN GY PNTRHC+Y
Sbjct: 208 SNCIRYFIRKKIKEDPLWRNLSVIFSGPEVPGEGEHKIMQHIRDMRNQLGYRPNTRHCMY 267
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML L +HE HF++LRE++ G + A ++ +F +
Sbjct: 268 GQDADLIMLGLVSHEPHFTLLREIIDFSGGFGR--------------NDNALKEVKKFTK 313
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
+ D +Q LH+ LREYL+ EF + DLE I+DDF+FM F VGNDFLPH
Sbjct: 314 QSD--------FQLLHLSILREYLEIEFAYQHDQSTYDLERIIDDFVFMTFLVGNDFLPH 365
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGG--YLTD-GSKPSLRRVEHFIQAVGSYEDRIFQK 297
MPTL+I +GA LL Y+++ G YLTD G P+ R+E F++ +G+ E IF++
Sbjct: 366 MPTLDIGDGAFTLLFDTYREQRARWGNGQYLTDSGEIPNPARLEAFLKVIGAAETEIFEE 425
Query: 298 RARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECV 357
RA+ E + R+K +
Sbjct: 426 RAK-----NEVVMRKKQR------------------------------------------ 438
Query: 358 GRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSD 417
R D G S P + I E E S ++D + A ++ ++ D S
Sbjct: 439 -RWDKRDGKSSMPSDL-----------EIAEVEASKQSD-------YNAMVRSMMADVSS 479
Query: 418 AFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLR--YTEGLCWVMHYY 475
+ +V E K RYY EK K + + LR Y EGL W + YY
Sbjct: 480 GTQVVEGWK-QVGESEKDHKGRYYYEKLQLKP----VDIAGHLALRKSYIEGLIWCLAYY 534
Query: 476 YEGVCSWQWFYPYHYAPFASDLKDLDQF--NISFELGHPFKPFNQLLGVFPSASSHALPE 533
Y G SW WF+PYHY P SDL +L +I FE+G P KPF QL+G P ASS +P
Sbjct: 535 YRGCISWGWFFPYHYGPMISDLTNLPAVFQSIRFEIGQPLKPFEQLMGCLPPASSALVPR 594
Query: 534 HYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKI--EHTLT 591
YR+LM+ P SPI +YP F VDMNGKR W+G+ LPFID RL D +K + LT
Sbjct: 595 IYRQLMSSPESPIKQYYPNSFVVDMNGKRNPWEGVNILPFIDANRLKDAIKDNCPDRLLT 654
Query: 592 EEEARRNSI 600
EE RN +
Sbjct: 655 AEERNRNRV 663
>gi|384488412|gb|EIE80592.1| 5'-3' exoribonuclease 1 [Rhizopus delemar RA 99-880]
Length = 1739
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 236/639 (36%), Positives = 347/639 (54%), Gaps = 95/639 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR +KDA D+ RQ+ +G +LP + FD+N ITPGTEFM L
Sbjct: 570 MNQQRSRRFRTAKDAEDA-------RQKALAKGEELPEQDP---FDTNCITPGTEFMIKL 619
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+I +++ D W +++ILS VPGEGEHKIM Y+RL + P Y+PNTRHCLY
Sbjct: 620 TQQLRYFISKKVSEDADWRNVQIILSGPEVPGEGEHKIMEYIRLAKAQPDYNPNTRHCLY 679
Query: 121 GLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADL+ML L +H+ HF++LRE V F Q+ K L Q +L
Sbjct: 680 GLDADLLMLGLLSHDPHFALLREEVTFGRNQKKKIGLDNQNFYL---------------- 723
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
LH+ +REYLD EF PF D E +VDDFI + F+GNDF
Sbjct: 724 ---------------LHLCLIREYLDMEFSALKTTLPFPYDFERVVDDFILLALFIGNDF 768
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGS-YEDRIFQ 296
LPH+P + I EGA+ L+ +YK+ GYL DG + + R++ + + + E F+
Sbjct: 769 LPHLPNIHINEGALGLMFKIYKETLPTCEGYLQDGGRVDMTRLQKVLDQISTVVEKEAFE 828
Query: 297 ----------------KRAR--LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFH 338
+RAR +HQ ++R+KA+ + E Q + V F
Sbjct: 829 AEGIDALYLAGKQPDGERAREIVHQ-----LERKKAKENKTSMTE--HQAEIFRAVRDFL 881
Query: 339 G---SRLASGPS-----PSPYQQSECVGRLDNGKGTSGRP--HKVPRLSSGATIGAAIVE 388
LA+G P + + +L + H+ +++ I + ++
Sbjct: 882 TGPPKLLATGSVLRFSFPFKNRDKNFIKKLAKELNMNHMVTWHQAQKMTELELIFSHQLD 941
Query: 389 AEN-SFETDPQE---NKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEE- 443
A++ + +T +E ++E A+ + L + ++ ++ + ++++ E E +E+
Sbjct: 942 ADDQTSDTTSEESEIDEEAIAARDRVLKKYENADIVPEDIDREQIEKEEKAQFEAAFEQW 1001
Query: 444 -------KFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASD 496
K N + +E + ++ Y G+ WV+ YYY GV SW WFYPYHYAP SD
Sbjct: 1002 KAEYYKDKMNIDINDSQEMEK--LIGSYVIGIQWVLQYYYNGVASWGWFYPYHYAPKISD 1059
Query: 497 LKDLDQF-NISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 555
L ++ +F + +F LG PFKP+ QL+GV P S LP Y++LMTDP+SPI DFYPTDF+
Sbjct: 1060 LTNIVRFQDHTFTLGQPFKPYEQLMGVLPMLSKKLLPAAYQELMTDPSSPIIDFYPTDFD 1119
Query: 556 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 594
+DMNGK+ SW+ I K+PFIDE RLLD +K EH LT++E
Sbjct: 1120 MDMNGKKQSWEAIVKIPFIDEKRLLDAMKSREHRLTKDE 1158
>gi|303319605|ref|XP_003069802.1| exonuclease, putative [Coccidioides posadasii C735 delta SOWgp]
gi|240109488|gb|EER27657.1| exonuclease, putative [Coccidioides posadasii C735 delta SOWgp]
gi|320040722|gb|EFW22655.1| exonuclease [Coccidioides posadasii str. Silveira]
Length = 1445
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 238/635 (37%), Positives = 340/635 (53%), Gaps = 73/635 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA A+E+ +R+ E PK D FDSN ITPGTEFMA L
Sbjct: 94 MNQQRARRFRTALDA--EIAKEKAIREGIEM------PKEDP--FDSNCITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+I+ +++ D W+ ++VILS VPGEGEHKIM Y+R + P YDPN RHCLY
Sbjct: 144 TKQLKYFINKKVSEDAKWQGVEVILSGHEVPGEGEHKIMEYIRQAKAQPDYDPNVRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+Q++ +K E +
Sbjct: 204 GLDADLIMLGLLSHDPHFCLLREEV-TFGRQNQ-------------------KKVKELEH 243
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGND 236
+ + LH+ +REYL+ EF+ FE D+E ++DDFI M FFVGND
Sbjct: 244 QN---------FYLLHLCIVREYLELEFQELEQEGALQFEFDMERVIDDFILMAFFVGND 294
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP++P L I EGA+ + VYK+ L GY+ + + +L R+ + ++G E R F+
Sbjct: 295 FLPNLPNLHINEGALAWMFKVYKEVLPKLDGYINERGRINLNRLGVLLDSLGDVEFRFFE 354
Query: 297 KRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSEC 356
+ ++ R + + DD + L ++ P + S++ S P
Sbjct: 355 AEYSDSRWLKSKLSRGEEKPEILDDPKAL----TISPAQKHILSKVKKYISHRPVNDDGY 410
Query: 357 VGRLDNGKGTSGRPHK-VPRLSSGATIGAAIVEAEN----------------SFETDPQE 399
LD R K V +L+ I + V E+ + ++ ++
Sbjct: 411 PVPLDLSPSLPARDRKFVEQLADDLRISWSSVSNEHGDRFLRLQLPSKQQLANGDSASED 470
Query: 400 NKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPG-------WKERYYEEKFNAKTPEE 452
EE + + +L+ +A + E+ ++ E WK +YYE KF T +
Sbjct: 471 EDEEAQIAVLRVLKKYENAKVKETTAEEAQQIAEKKYEQKFQEWKNKYYEGKFGWGTDND 530
Query: 453 REETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHP 512
EE RK + Y +GL WV++YYY GV SW WFY YHY+P SD+K ++ F+LG P
Sbjct: 531 -EEMRK-LTENYVQGLQWVLYYYYRGVASWPWFYRYHYSPMISDVKRGLAADMDFKLGQP 588
Query: 513 FKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLP 572
F PF QL+GV P S +P+ Y +LM P+SPI DFYP DFE+DMNGK+ W+ + K+P
Sbjct: 589 FFPFQQLMGVLPDRSKKIVPQAYHELMISPDSPIIDFYPRDFELDMNGKKMEWEAVVKIP 648
Query: 573 FIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
FIDE RLL + EH LT EE RN+ + F
Sbjct: 649 FIDEDRLLKAMASKEHLLTPEEKARNNFGVTLKFT 683
>gi|430814593|emb|CCJ28201.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1318
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 235/614 (38%), Positives = 324/614 (52%), Gaps = 82/614 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRF+A+K+A + L QE +G +P FDSN ITPGT FM L
Sbjct: 92 MNQQRSRRFKAAKEAYE-------LYQEKISKGEDVPKDP----FDSNCITPGTLFMKRL 140
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S L+Y+I+ +++ D W+ I++I S VPGEGEHKIM Y+RL + P Y+PN RHCLY
Sbjct: 141 SEQLKYFINRKVSEDTNWKGIEIIFSGHEVPGEGEHKIMEYIRLSKAQPDYEPNLRHCLY 200
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V G K+K E +E
Sbjct: 201 GLDADLIMLGLLSHDPHFCLLREEVLF---------------------GSVKKKKQELEE 239
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFR----IPNPPFEIDLECIVDDFIFMCFFVGND 236
+ + +H+ LREYL+ EF+ IPN P+ + E I+DDFI + FFVGND
Sbjct: 240 QN---------FYLMHLCLLREYLEMEFQELTNIPNFPY--NFEKIIDDFILLAFFVGND 288
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLPH+P L I EGA+ L+ +YKK GY+ + +L R+ ++ + +
Sbjct: 289 FLPHLPKLHINEGALALVFKIYKKVIPKARGYINNAGVINLERLALVLEEL--------E 340
Query: 297 KRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSEC 356
K+ R R+ K ++G Q + + RF L + PS ++
Sbjct: 341 KQEREDFRNELEDKNWVGSKKKGLLTMTSNQKKLFLEMERFVSGNLETLVLPSTLSATD- 399
Query: 357 VGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENS----FETDPQ-ENKEEFKAKL-KE 410
V +++ + EN FE D + EN E K + +E
Sbjct: 400 -------------RSFVFKMADDFYVKCTKYTIENEKYLRFEKDNKVENGNEIKDIIDRE 446
Query: 411 LLRDKS----DAFNSDNPEEDKV-KLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYT 465
L R K+ D D+ +ED + + WK+ YY EK + ++ K++ Y
Sbjct: 447 LSRYKNAIILDIEKDDSHKEDAIFEEKWIKWKDSYYIEKLGFSINDTKK--LKEMAENYI 504
Query: 466 EGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPS 525
EGL WV+ YYY GV SW WFY YHY+P SD+K N+SF LG PFKPF QL+ V P
Sbjct: 505 EGLQWVLFYYYRGVSSWSWFYKYHYSPKVSDIKKGFAANLSFTLGTPFKPFEQLMAVLPE 564
Query: 526 ASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKK 585
S +P+ + LM + SPI DFYP DFE+DMN K+ SW+ IAK+PFI+E LL +K
Sbjct: 565 RSKKLVPKPFADLMVNETSPIRDFYPEDFELDMNDKKASWEAIAKIPFINEELLLSVIKA 624
Query: 586 IEHTLTEEEARRNS 599
EH LT+EE RN+
Sbjct: 625 KEHLLTDEEKNRNT 638
>gi|321259283|ref|XP_003194362.1| 5'-3' exonuclease involved in mRNA decay; Kem1p [Cryptococcus
gattii WM276]
gi|317460833|gb|ADV22575.1| 5'-3' exonuclease involved in mRNA decay, putative; Kem1p
[Cryptococcus gattii WM276]
Length = 1456
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 237/636 (37%), Positives = 323/636 (50%), Gaps = 87/636 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA KDA D R++ E+ G KLP D + FDSN ITPGT FMA L
Sbjct: 96 MNQQRSRRFRAGKDARDQ-------REKAEKNGEKLP---DEKAFDSNAITPGTPFMARL 145
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S L+YY+ R++ D W I+VILS +VPGEGEHKI ++RL + P Y+PNTRHCLY
Sbjct: 146 SQHLKYYVRKRISEDADWRNIRVILSGHDVPGEGEHKIQEFIRLNKAQPDYNPNTRHCLY 205
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V G+ R+ E
Sbjct: 206 GLDADLIMLGLLSHDPHFCLLREEV---------------------TFGRKSRQNTELAN 244
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFL 238
+ LH+ +REYLD EF FE DLE I+DDFI M FVGNDFL
Sbjct: 245 TN---------FFLLHLSLMREYLDLEFSSLQTQISFEYDLERIIDDFILMAIFVGNDFL 295
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK- 297
PH+P L I EGA+ + +YK + GYL + SL R++ + + +E + F+
Sbjct: 296 PHLPDLHINEGALERIWGMYKDILPTIDGYLNEHGTISLPRLQLLLDKLAEFEVKRFEDD 355
Query: 298 ---RARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQS 354
+ H + + ++G V Q L + F + P+P +
Sbjct: 356 LVDQVHFSGNHTKDTMVIEKARKKGRKVITKYQQKVLNQLRSFIEKQ---QNQPNPTHRL 412
Query: 355 ECVG---RLDNG--KGTSGRPHKVPRLSSGATIGAAIV------------------EAEN 391
E + + DN + + H G +++ E +
Sbjct: 413 ELINTQDKRDNAFVQELADELHLHTTWDEVDDYGQSLIVCTFNMEGVSQDGSADGNEEDE 472
Query: 392 SFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEED-------KVKLGEPGWKERYYEEK 444
+E+D E +E K ++ + R+ S A D ED K+K G K +YY +K
Sbjct: 473 DWESDGME--DEGKLAVQRVFRNWSKAAVVDTYPEDVEKSMDEKLKEAMDGIKRQYYHDK 530
Query: 445 F--NAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQ 502
N P + + D+V Y EGL W+++YYY+GV SW WFY YHY+P +DLK +
Sbjct: 531 LEINYNDPAQMQ----DLVHHYIEGLQWILNYYYKGVSSWGWFYKYHYSPRITDLKGVAD 586
Query: 503 FNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKR 562
F+ G PF PF QL+GV P S +P YR LM + SPI DFYP +FE+DMNGK+
Sbjct: 587 MKFEFDYGKPFTPFQQLMGVLPVDSMEHVPLAYRDLMYEETSPIIDFYPRNFELDMNGKK 646
Query: 563 YSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
W+ + K+PFID+ RLL + + LT EE RN
Sbjct: 647 QDWEAVVKIPFIDQNRLLKAMAARDVRLTPEERERN 682
>gi|281202869|gb|EFA77071.1| 5'-3' exoribonuclease [Polysphondylium pallidum PN500]
Length = 1091
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 243/687 (35%), Positives = 354/687 (51%), Gaps = 115/687 (16%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQE-------FEREGRKLPPKSDSQV-FDSNVITP 52
MNQQRSRRFR++ DA + +E + E E E L D + FDSN ITP
Sbjct: 108 MNQQRSRRFRSALDARLTREKEAKELMENIANGKMSESEVEALQKAKDEKFHFDSNCITP 167
Query: 53 GTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYD 112
GT FM ++++ L+ Y+ +++ DP W+ +KVI+SDA++PGEGEHKIM Y+R QR Y+
Sbjct: 168 GTMFMDLVALTLRSYVAEKVSTDPAWKNLKVIISDASIPGEGEHKIMDYIRKQRAQKDYN 227
Query: 113 PNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAK 172
PN ++ +YGLDADLIMLALATHE +F ILRE V T G++ + P + +G+
Sbjct: 228 PNQKNVIYGLDADLIMLALATHEPNFEILREFVQTKGRKQQ----STPKEMQGGDDGE-- 281
Query: 173 RKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFF 232
+EK D + K YQ L + R+YLD E + +P F D+E ++DDFI +CFF
Sbjct: 282 ------EEKKDFLT---KDYQLLSLNLFRDYLDSELKC-SPAFGFDIERVIDDFILICFF 331
Query: 233 VGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYED 292
VGNDFLPH+P+L+I EGAI+ +M +YK YLT+ + S+ RV + E+
Sbjct: 332 VGNDFLPHLPSLQINEGAIDRIMKIYKDLLPTFDDYLTEDGEFSIDRVGKIFAKLAMVEE 391
Query: 293 RIFQKRARLHQRHAERIKREKAQARRGDDVEPLAQ-PDSLVPVSRFHGSRLASGPSPSPY 351
I +R + R +AR + + L + P SL L SG +
Sbjct: 392 DIMMRRKSKEEAMIRR------KARMDGNFQQLQEDPQSL---------NLNSGTTK--- 433
Query: 352 QQSECVGRLDNGKGT----SGRPHKVPRLSSGATIGAA---------------------- 385
Q E L N T + RP+K R+ GA +A
Sbjct: 434 QHQEAAKNLLNEIFTETDDTQRPNKKLRVEDGAANKSAAAKIREELLAQKKGTTSNKDAA 493
Query: 386 ------IVEAENSFETDPQENKEEFKAKLKELLR--------------------DKSDAF 419
IVE + D ++ E+ AK+ E++ ++ +
Sbjct: 494 KQLQQSIVEQSTTAPADGKKKGEKRGAKVIEIMEVPVEEKKLPSGNKKRKHGEEEEEEQS 553
Query: 420 NSDNPEEDKV------------KLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEG 467
NS+ E + K+G GW+ERYY F ++ E+ + V Y +G
Sbjct: 554 NSNGGEGQSLESSTFIDRMKDVKIGTKGWRERYYNHHFESEAKED-DNVVLHVCQSYIDG 612
Query: 468 LCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFN--ISFELGHPFKPFNQLLGVFPS 525
L WV+ YYY+G SW W+YPYHYAPF D+ + + +F+LG PF+PF QL+ V P
Sbjct: 613 LAWVLKYYYKGCASWGWYYPYHYAPFIIDISENIELIKPATFDLGSPFRPFEQLMSVLPK 672
Query: 526 ASSHALPEHYRKLM-----TDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLL 580
S +P+ Y+K+M + SPI FYP++F +D+ + W+G+ LPFIDE LL
Sbjct: 673 ESGQFVPKPYQKMMGIDDGSGDVSPIIHFYPSNFMIDVQPSQPIWKGVCLLPFIDEKELL 732
Query: 581 DEVKKIEHTLTEEEARRNSIMADMLFV 607
+K +E+ LT+EE RNS A++L V
Sbjct: 733 SSLKSLENKLTDEEKFRNSQGAELLIV 759
>gi|119183089|ref|XP_001242618.1| hypothetical protein CIMG_06514 [Coccidioides immitis RS]
gi|392865522|gb|EAS31317.2| exonuclease Kem1 [Coccidioides immitis RS]
Length = 1445
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 237/635 (37%), Positives = 340/635 (53%), Gaps = 73/635 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA A+E+ +R+ E PK D FDSN ITPGTEFMA L
Sbjct: 94 MNQQRARRFRTALDA--EIAKEKAIREGIEM------PKEDP--FDSNCITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+I+ +++ D W+ ++VILS VPGEGEHKIM Y+R + P YDPN RHCLY
Sbjct: 144 TKQLKYFINKKVSEDAEWQGVEVILSGHEVPGEGEHKIMEYIRQAKAQPDYDPNVRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+Q++ +K E +
Sbjct: 204 GLDADLIMLGLLSHDPHFCLLREEV-TFGRQNQ-------------------KKVKELEH 243
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGND 236
+ + LH+ +REYL+ EF+ FE D+E ++DDFI M FFVGND
Sbjct: 244 QN---------FYLLHLCIVREYLELEFQELEQEGALQFEFDMERVIDDFILMAFFVGND 294
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP++P L I EGA+ + VYK+ L GY+ + + +L R+ + ++G E R F+
Sbjct: 295 FLPNLPNLHINEGALAWMFKVYKEVLPKLDGYINERGRINLNRLGVLLDSLGDVEFRFFE 354
Query: 297 KRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSEC 356
+ ++ R + + DD + L ++ P + S++ S P
Sbjct: 355 AEYSDSRWLKSKLSRGEEKPEILDDPKAL----TISPAQKHILSKVKKYISHRPVNDDGY 410
Query: 357 VGRLDNGKGTSGRPHK-VPRLSSGATIGAAIVEAEN----------------SFETDPQE 399
LD R K V +L+ I + V E+ + ++ ++
Sbjct: 411 PVPLDLSPSLPARDRKFVEQLADDLRISWSSVSNEHGDRFLRLQLPSKQQLANGDSASED 470
Query: 400 NKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPG-------WKERYYEEKFNAKTPEE 452
EE + + +L+ +A + E+ ++ E WK +YYE KF T +
Sbjct: 471 EDEEAQIAVLRVLKKYENAKVKETTAEEAQQIAEKKYEQKFQEWKNKYYEGKFGWGTDND 530
Query: 453 REETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHP 512
EE RK + Y +GL WV++YYY GV SW WFY YHY+P SD+K ++ F+LG P
Sbjct: 531 -EEMRK-LTENYVQGLQWVLYYYYRGVASWPWFYRYHYSPMISDVKRGLGADMDFKLGQP 588
Query: 513 FKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLP 572
F PF QL+GV P S +P+ Y +LM P+SPI DFYP DFE+DMNGK+ W+ + K+P
Sbjct: 589 FFPFQQLMGVLPDRSKKIVPQAYHELMISPDSPIIDFYPRDFELDMNGKKMEWEAVVKIP 648
Query: 573 FIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
FI+E RLL + EH LT EE RN+ + F
Sbjct: 649 FINEDRLLKAMASKEHLLTPEEKARNNFGVTLKFT 683
>gi|403163584|ref|XP_003323653.2| hypothetical protein PGTG_05555 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375164365|gb|EFP79234.2| hypothetical protein PGTG_05555 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1452
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 241/645 (37%), Positives = 334/645 (51%), Gaps = 98/645 (15%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRF+ +K E + L ++ R G KLP DS FDSN ITPGT FMA L
Sbjct: 94 MNQQRSRRFKTAK-------ENQELIEKAIRRGEKLP---DSTGFDSNCITPGTPFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S L+Y+I+ +++ D W+ ++VI S +VPGEGEHKIM Y+RL + Y+PN RHC+Y
Sbjct: 144 SEQLKYFINKKVSEDSAWQSVQVIFSGHDVPGEGEHKIMEYIRLSKAQEDYNPNIRHCVY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V K A +
Sbjct: 204 GLDADLIMLGLLSHDPHFCLLREEV--------------------------KFSAQKSSS 237
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEF----RIPNPPFEIDLECIVDDFIFMCFFVGND 236
KG E + + LHI +R+YLD+EF ++ + E DLE I+DDFI +C FVGND
Sbjct: 238 KGLE----NQRFYLLHISLVRDYLDWEFASLRKVKD--LEYDLERIIDDFILLCIFVGND 291
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLPH+P L I EGA+ LL +YK+ GGYL + R++ + + YE F+
Sbjct: 292 FLPHLPNLHINEGALGLLFDIYKRVLPKAGGYLNEFGTLHTERLQLVLNELIVYERENFE 351
Query: 297 KRARLHQRHAERIKREKAQARRGDDVEPLAQPDS----LVPVSRFHGSRLASGPSPSPYQ 352
E + ++++ PL ++ L + +F S L SPS Y+
Sbjct: 352 HICA-DSSWIESKRSSHGKSKKKATNNPLVLSETQRTLLSKIEQFVQSNLN---SPSKYE 407
Query: 353 QSECVGRLDNGKGTSGRPHKVPR-LSSGATIGAAIVE-AEN-----SFETDPQENKEEFK 405
+ + K K R L++ + + E EN + DP ++ E
Sbjct: 408 ATLALPACYPAKD-----RKFLRDLAAELNLCISFDEFNENDEPLITLAFDPDQSPPEDS 462
Query: 406 A--KLKELLRD------KSDAFNSDNPEEDKV------KLGEPGWKERYY----EEKFNA 447
A ++++L D N+ + D+V EP W E + E+KF
Sbjct: 463 AINAVQDMLEDFQLGQPAKPETNTAQSKVDEVFHKYTQAAKEPEWNEDDFDQEQEQKFQK 522
Query: 448 KTPEEREE--------------TRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPF 493
E + + ++ YTEGL WV+HYYY+GV SW WFYPYHY+P
Sbjct: 523 ALSEWKSQYYHEKMNLDFANPDQLHELTYAYTEGLQWVLHYYYDGVASWSWFYPYHYSPM 582
Query: 494 ASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTD 553
SDL ++ + SF LG PFKPF QL+GV P SS +P +R LM + SPI D YP
Sbjct: 583 ISDLSNVAPYKFSFNLGKPFKPFEQLMGVLPELSSSHVPPAFRDLMVNSESPIIDLYPRQ 642
Query: 554 FEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
FE D+NGK++ W+ I K+PFID+ RLL +K EH L +EE RRN
Sbjct: 643 FETDLNGKKHDWEAIVKIPFIDQDRLLKAMKAHEHKLLDEERRRN 687
>gi|389635811|ref|XP_003715558.1| 5'-3' exoribonuclease 1 [Magnaporthe oryzae 70-15]
gi|351647891|gb|EHA55751.1| 5'-3' exoribonuclease 1 [Magnaporthe oryzae 70-15]
gi|440470232|gb|ELQ39313.1| 5'-3' exoribonuclease 1 [Magnaporthe oryzae Y34]
gi|440485056|gb|ELQ65052.1| 5'-3' exoribonuclease 1 [Magnaporthe oryzae P131]
Length = 1435
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 232/633 (36%), Positives = 335/633 (52%), Gaps = 71/633 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA E R + REG++LP + + FDSN ITPGTEFMA L
Sbjct: 94 MNQQRARRFRTALDA-------EVARDKAVREGQELPKE---EPFDSNCITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S L+Y+++ +++ D W+ +++LS VPGEGEHKIM Y+R + P Y+ N RHCLY
Sbjct: 144 SEQLKYFVNKKVSEDTEWQGCEIVLSGHEVPGEGEHKIMEYIRNAKAQPDYNHNVRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+Q +K ++ E +
Sbjct: 204 GLDADLIMLGLLSHDPHFCLLREEV-TFGRQ-------------------SKSQSKELEH 243
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNP----PFEIDLECIVDDFIFMCFFVGND 236
+ + LH+ +REYL+ EF+ F D+E ++DDFI M FFVGND
Sbjct: 244 QN---------FYLLHLCIVREYLELEFQDLKKDGRMTFPFDMERVIDDFILMAFFVGND 294
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP++P L I EGA+ L+ +YK+ GY+ +G + +L+R+ ++ +G E R F+
Sbjct: 295 FLPNLPHLHINEGALALMFRLYKEILPKCDGYINEGGRVNLQRLGLLLEGLGEAERRFFE 354
Query: 297 KRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSEC 356
E R K Q + ++P + V+ + P ++S+
Sbjct: 355 V-----DMQNEHWFRSKQQMENSEAAPVKSRPKGQLQVTTSQKNLWKHKIKPFITKRSQT 409
Query: 357 VGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAEN------SFETDPQEN---------- 400
L G + R S +V+ E SF P +
Sbjct: 410 PLNLGTGLNAADRKFAQEIADSFRLTYETLVDDEGNRAIVLSFPKLPDASGNDDDDDGFE 469
Query: 401 KEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGE------PGWKERYYEEKFNAKTPEERE 454
+E A +E+L+ A +PEE K + WK++YY EKF T E +E
Sbjct: 470 EEGDAAAHREMLKYDRAAVVDTSPEEAKAAMEVLYQQKFQEWKDKYYSEKFEW-TAETKE 528
Query: 455 ETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFK 514
+ +++ Y +GL WV++YYY G+ SW WFY +HY+P SD+ +++F LG PFK
Sbjct: 529 QGLRELAENYVQGLQWVLYYYYRGIRSWPWFYKFHYSPMISDVMKGLNADMNFTLGQPFK 588
Query: 515 PFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFI 574
P+ QL+GV P S +P Y +LMTDPNSPI DFYP DFE+DMNGK+ W+ + K+PFI
Sbjct: 589 PYEQLMGVLPDRSKKIVPTVYWELMTDPNSPIIDFYPRDFELDMNGKKQEWEAVVKIPFI 648
Query: 575 DEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
DE RLLD + H L++ E RN + F
Sbjct: 649 DEKRLLDGMATKNHLLSDVEKSRNGFGVALKFT 681
>gi|326480075|gb|EGE04085.1| 5'-3' exoribonuclease [Trichophyton equinum CBS 127.97]
Length = 1424
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 237/633 (37%), Positives = 336/633 (53%), Gaps = 75/633 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA E ++ +EG ++P K D+ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRARRFRTALDA-------ELAKERAIKEGVEMP-KEDA--FDSNCITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+I+ +++ D W+ ++V+LS VPGEGEHKIM Y+R + P YDPN RHCLY
Sbjct: 144 TKQLKYFINKKVSEDAEWQGVEVVLSGHEVPGEGEHKIMEYIRQAKAQPEYDPNMRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+Q +++K+ E +
Sbjct: 204 GLDADLIMLGLLSHDPHFCLLREEV-TFGRQ-------------------SQKKSKELEH 243
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGND 236
+ + LH+ +REYL+ EF+ F D+E I+DDFI M FFVGND
Sbjct: 244 QN---------FYLLHLCIVREYLELEFQELKLDGALQFPFDMERIIDDFILMAFFVGND 294
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP++P L I EGA+ + VYK+ LGGY+ + ++ R+ + A+ E R F+
Sbjct: 295 FLPNLPNLHINEGALAWMFKVYKEILPKLGGYVNEHGTINMGRLRTLLAALSDVEFRFFE 354
Query: 297 KRARLHQRHAERIKREKAQARRGDDVEPL-AQPD--SLVPVSRFHGSRLASGPSPSPYQQ 353
+ K++ GD L +P+ ++ P + +R+ + P +
Sbjct: 355 A-------EYSDARWLKSKTLDGDQTPTLPEKPNVLTITPAQKHIFNRIKKYVTHRPMDE 407
Query: 354 SECVGRLDNGKGTSGRPHK-VPRLSSGATIGAAIVEAE------------NSFETDPQEN 400
+ LD R K V +L+ + + V + N + D ++
Sbjct: 408 AGQPIPLDLSPSLPARDRKFVEQLADSLHLKWSSVLNQHEERFLRVQLPANDDDDDEDDD 467
Query: 401 KEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEP-------GWKERYYEEKFNAKTPEER 453
+E + + +L+ +A D ED E WK++YY+ KF E
Sbjct: 468 DDESQIAILRVLKKYENAKVKDVTAEDAQMAAEKKYEKKFQDWKDKYYKGKFGWGL-ENA 526
Query: 454 EETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPF 513
EE RK + Y +GL WV+ YYY GV SW WFY YHYAP SD+ ++ F+LG PF
Sbjct: 527 EEMRK-LTENYVQGLQWVLFYYYRGVASWPWFYRYHYAPMISDIHLGLGADVDFKLGQPF 585
Query: 514 KPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPF 573
PF QL+GV P S +P + LMT P+SPI DFYP DFE+DMNGK+ W+ + K+PF
Sbjct: 586 FPFQQLMGVLPDRSKKIVPVAFHSLMTSPDSPIIDFYPRDFELDMNGKKMEWEAVVKIPF 645
Query: 574 IDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 606
IDE RLL + EH LT EE RNS + F
Sbjct: 646 IDEERLLKAMATKEHLLTPEEKARNSFGVTLKF 678
>gi|326468946|gb|EGD92955.1| exonuclease [Trichophyton tonsurans CBS 112818]
Length = 1424
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 237/633 (37%), Positives = 336/633 (53%), Gaps = 75/633 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA E ++ +EG ++P K D+ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRARRFRTALDA-------ELAKERAIKEGVEMP-KEDA--FDSNCITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+I+ +++ D W+ ++V+LS VPGEGEHKIM Y+R + P YDPN RHCLY
Sbjct: 144 TKQLKYFINKKVSEDAEWQGVEVVLSGHEVPGEGEHKIMEYIRQAKAQPEYDPNMRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+Q +++K+ E +
Sbjct: 204 GLDADLIMLGLLSHDPHFCLLREEV-TFGRQ-------------------SQKKSKELEH 243
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGND 236
+ + LH+ +REYL+ EF+ F D+E I+DDFI M FFVGND
Sbjct: 244 QN---------FYLLHLCIVREYLELEFQELKLDGALQFPFDMERIIDDFILMAFFVGND 294
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP++P L I EGA+ + VYK+ LGGY+ + ++ R+ + A+ E R F+
Sbjct: 295 FLPNLPNLHINEGALAWMFKVYKEILPKLGGYVNEHGTINMGRLRTLLAALSDVEFRFFE 354
Query: 297 KRARLHQRHAERIKREKAQARRGDDVEPL-AQPD--SLVPVSRFHGSRLASGPSPSPYQQ 353
+ K++ GD L +P+ ++ P + +R+ + P +
Sbjct: 355 A-------EYSDARWLKSKTLDGDQTPTLPEKPNVLTITPAQKHIFNRIKKYVTHRPMDE 407
Query: 354 SECVGRLDNGKGTSGRPHK-VPRLSSGATIGAAIVEAE------------NSFETDPQEN 400
+ LD R K V +L+ + + V + N + D ++
Sbjct: 408 AGQPIPLDLSPSLPARDRKFVEQLADSLHLKWSSVLNQHEERFLRVQLPANDDDDDEDDD 467
Query: 401 KEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEP-------GWKERYYEEKFNAKTPEER 453
+E + + +L+ +A D ED E WK++YY+ KF E
Sbjct: 468 DDESQIAILRVLKKYENAKVKDVTAEDAQMAAEKKYEKKFQDWKDKYYKGKFGWGL-ENA 526
Query: 454 EETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPF 513
EE RK + Y +GL WV+ YYY GV SW WFY YHYAP SD+ ++ F+LG PF
Sbjct: 527 EEMRK-LTENYVQGLQWVLFYYYRGVASWPWFYRYHYAPMISDIHLGLGADVDFKLGQPF 585
Query: 514 KPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPF 573
PF QL+GV P S +P + LMT P+SPI DFYP DFE+DMNGK+ W+ + K+PF
Sbjct: 586 FPFQQLMGVLPDRSKKIVPVAFHSLMTSPDSPIIDFYPRDFELDMNGKKMEWEAVVKIPF 645
Query: 574 IDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 606
IDE RLL + EH LT EE RNS + F
Sbjct: 646 IDEERLLKAMATKEHLLTPEEKARNSFGVTLKF 678
>gi|346974250|gb|EGY17702.1| 5'-3' exoribonuclease [Verticillium dahliae VdLs.17]
Length = 1404
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 228/637 (35%), Positives = 340/637 (53%), Gaps = 84/637 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR + DA E R++ ++G ++P ++ FDSN ITPGTEFMA L
Sbjct: 95 MNQQRSRRFRTALDA-------ENAREKAIKDGVEMPKEAP---FDSNCITPGTEFMAKL 144
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S L+Y+++ ++ D W++ +++LS VPGEGEHKIM Y+R + P YD N RHCLY
Sbjct: 145 SRQLKYFVNKKVTEDADWQECEIVLSGHEVPGEGEHKIMEYIRNAKAQPDYDTNVRHCLY 204
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+ +K K+ E +
Sbjct: 205 GLDADLIMLGLLSHDPHFCLLREEV-TFGR-------------------ASKTKSKELEH 244
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFR------IPNPPFEIDLECIVDDFIFMCFFVG 234
+ + LH+ +REYLD EF+ I N P+ DLE ++DDFI M FF+G
Sbjct: 245 QN---------FYLLHLCIVREYLDLEFQELKQDGILNFPY--DLERVIDDFILMGFFIG 293
Query: 235 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGS----- 289
NDFLPH+P L I EGA+ + +YK GY+ +G +L+R++ + +
Sbjct: 294 NDFLPHLPRLHINEGALASMFRIYKSILPECDGYINEGGVINLQRLQRLLTELAKDETDQ 353
Query: 290 YEDRIFQKRARLHQRHAERIKREKAQAR-RGDDVEPL-AQPDSLVPVSRFHGSRLASGPS 347
+E + +R ++ +E+ ++ Q++ RG V AQ D + + + + P+
Sbjct: 354 FEHDVSDERWFQSKQISEQQQKNAVQSKQRGKGVVMTSAQKD----LWKNNIKPYLTKPT 409
Query: 348 PSPYQQSECVGRLDNGKGTSGRPHK-VPRLSSGATIGAAIVEAENS----FETDPQENKE 402
P P LD G + K V L+ + + E ++ T PQ
Sbjct: 410 PEP---------LDLGTELNAADRKFVQDLADAVHVDWSTKEDDDGHRHLILTSPQSEDN 460
Query: 403 EFKAKLKELLR-------DKSDA--FNSDNPEE---DKVKLGEPGWKERYYEEKFNAKTP 450
+ + L DK+ +D+ ++ D K GWK +YY +KF +P
Sbjct: 461 NDEEEEGTLALFRVMKNYDKATVVDITADDAKQHYADLYKQKYQGWKTKYYLQKFEDWSP 520
Query: 451 EEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG 510
+ ++ + Y +GL WV++YYY G+ SW WFY YHY+P SD+ +++F+LG
Sbjct: 521 DNYDKELTALCENYVQGLQWVLYYYYRGIASWPWFYAYHYSPLTSDVIKGLGADLNFKLG 580
Query: 511 HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAK 570
PF+P+ QL+GV P S +P Y LMT+P SPI DFYP DFE+DMNGK+ W+ + K
Sbjct: 581 QPFRPYEQLMGVLPDRSKSIVPTVYWDLMTNPKSPIVDFYPRDFELDMNGKKMEWEAVVK 640
Query: 571 LPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
+PFIDE RLLD + + L+++E RN + F
Sbjct: 641 IPFIDEKRLLDAMGPVNEKLSDDEKSRNQFGVSLKFT 677
>gi|121718863|ref|XP_001276218.1| exonuclease Kem1, putative [Aspergillus clavatus NRRL 1]
gi|119404416|gb|EAW14792.1| exonuclease Kem1, putative [Aspergillus clavatus NRRL 1]
Length = 1408
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 237/643 (36%), Positives = 337/643 (52%), Gaps = 94/643 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA A+E+ + Q E PK D+ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRARRFRTALDA--EVAKEKAIAQGIEM------PKEDA--FDSNCITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+I +++ D W+ ++++LS VPGEGEHKIM Y+R + P YD N RHCLY
Sbjct: 144 TQQLKYFISKKISEDKDWQGVEIVLSGHEVPGEGEHKIMEYIRHAKAQPDYDSNIRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+Q ++K E +
Sbjct: 204 GLDADLIMLGLLSHDPHFCLLREEV-TFGRQ-------------------VQKKPKELEH 243
Query: 181 KGDEVVVPKKPYQFLHIWTLRE-------------YLDYEFRIPNPPFEIDLECIVDDFI 227
+ + LH+ +RE LD+ F D+E ++DDFI
Sbjct: 244 QN---------FFLLHLCMVREYLELEFQELEQEGVLDFPF---------DMERVIDDFI 285
Query: 228 FMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAV 287
M FFVGNDFLP++P L I EGA+ L+ +YK+ +GGY+ +G +L+R+ ++A+
Sbjct: 286 LMAFFVGNDFLPNLPNLHINEGALALMFKIYKEVLPKMGGYVNEGGVINLKRLGMLVEAL 345
Query: 288 GSYEDRIFQ-----KRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRF----- 337
E R F+ + +R A E + +RG V P AQ + V ++
Sbjct: 346 SDVEFRFFEVEYSDAKWITAKRKAIENDFEPPEKQRGLTVTP-AQKELFKEVKKYVLNRP 404
Query: 338 ---HGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAE---N 391
GS+ PS P + + V +L N VP + G + + N
Sbjct: 405 EKETGSKPLDLPSALPARDRKFVEQLAND-------LHVPWTTVADEHGDRFIRLQLPTN 457
Query: 392 SFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPG-------WKERYYEEK 444
+ +E EE ++ ++R +A + E+ K E WK++YY K
Sbjct: 458 DDDDSEEEEDEEASMAVRRVIRRYENAKVQEISPEEAQKAAEQKYEEKFQEWKDKYYMSK 517
Query: 445 FNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFN 504
F + EE RK + Y +GL WV++YYY G+ SW WF+ YHYAP SD+ + +
Sbjct: 518 FGWGL-DNHEEMRK-LTENYVQGLQWVLYYYYRGIASWPWFFKYHYAPMISDVTKGLKAD 575
Query: 505 ISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYS 564
++F+LG PFKP+ QL+GV P S +P YR LMT P+SPI DFYP DFE+DMNGK+
Sbjct: 576 MNFQLGQPFKPYEQLMGVLPDRSKKIVPAAYRDLMTSPDSPIIDFYPRDFELDMNGKKME 635
Query: 565 WQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
W+ + K+PFI+E RLLD + H LT EE RN + F
Sbjct: 636 WEAVVKIPFIEERRLLDALATKSHLLTPEEKVRNDFGVSLKFT 678
>gi|405120875|gb|AFR95645.1| exonuclease II Exo2 [Cryptococcus neoformans var. grubii H99]
Length = 1448
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 238/636 (37%), Positives = 327/636 (51%), Gaps = 87/636 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA KDA D R++ E+ G KLP D + FDSN ITPGT FMA L
Sbjct: 85 MNQQRSRRFRAGKDARDQ-------REKAEKNGEKLP---DEKAFDSNAITPGTPFMARL 134
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S L+YY+ R++ D W I+VILS +VPGEGEHKI ++RL + P Y+PNTRHCLY
Sbjct: 135 SQHLKYYVRKRISEDADWRNIRVILSGHDVPGEGEHKIQEFIRLNKAQPDYNPNTRHCLY 194
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V G+ R+ E
Sbjct: 195 GLDADLIMLGLLSHDPHFCLLREEV---------------------TFGRKSRQNTELAN 233
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFL 238
+ LH+ +REYLD EF FE DLE I+DDFI M FVGNDFL
Sbjct: 234 TN---------FFLLHLSLMREYLDLEFSSLQTQISFEYDLERIIDDFILMAIFVGNDFL 284
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 298
PH+P L I EGA+ + +YK + GY+ + SL R++ + + +E + F+
Sbjct: 285 PHLPDLHINEGALERIWGMYKDILPTIDGYINEHGTISLPRLQLLLDKLAEFEVKRFEDD 344
Query: 299 ARLHQRH------AERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQ 352
L Q H + + EKA+ ++G V Q L + F + P+P
Sbjct: 345 L-LDQVHFSGNHTRDTMMIEKAR-KKGRKVITKYQQKVLNQLRSFIEKQ---QNQPNPTH 399
Query: 353 QSECVG---RLDNG--KGTSGRPHKVPRLSSGATIGAAIV------------------EA 389
+ E + + DN + + H G +++ E
Sbjct: 400 RLELINTQDKRDNAFVQELADELHLHTTWDEVDDYGQSLIVCTFNMEGVSQDGSADGNEE 459
Query: 390 ENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEED-------KVKLGEPGWKERYYE 442
+ +E+D E ++E K ++ + R+ S A D ED K+K K +YY
Sbjct: 460 DGDWESD--EMEDEGKLAVQRVFRNWSKAAVVDTYPEDVEKSMDEKLKEAMDDIKRQYYH 517
Query: 443 EKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQ 502
+K + + +D+V Y EGL W+++YYY+GV SW WFY YHY+P +DLK +
Sbjct: 518 DKLEINYSDPAQ--MQDLVHHYIEGLQWILNYYYKGVSSWGWFYKYHYSPRITDLKGVSD 575
Query: 503 FNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKR 562
F+ G PF PF QL+GV P S +P YR LM + SPI DFYP +FE+DMNGK+
Sbjct: 576 MKFEFDYGKPFTPFQQLMGVLPVDSMDHVPLAYRDLMYEETSPIIDFYPRNFELDMNGKK 635
Query: 563 YSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
W+ + K+PFID+ RLL + + LT EE RN
Sbjct: 636 QDWEAVVKIPFIDQNRLLKAMAARDIRLTPEERERN 671
>gi|340959829|gb|EGS21010.1| 5'-3' exoribonuclease 1-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1461
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 237/631 (37%), Positives = 337/631 (53%), Gaps = 73/631 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA ER R++ REG++LP + + FDSN ITPGTEFMA L
Sbjct: 94 MNQQRARRFRTALDA-------ERAREKALREGKELPKE---EPFDSNCITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S+ L+Y+I+ +++ D W+ +++LS VPGEGEHKIM Y+R R P Y+PNTRHCLY
Sbjct: 144 SLQLKYFINKKVSEDRDWQGPEIVLSGHEVPGEGEHKIMEYIRNARAQPDYNPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+Q AK K+ E +
Sbjct: 204 GLDADLIMLGLLSHDPHFCLLREEV-TFGRQ-------------------AKHKSKELEH 243
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFR-IPNP---PFEIDLECIVDDFIFMCFFVGND 236
+ + LH+ +REYL+ EF+ + P PF D+E ++DDFI M FFVGND
Sbjct: 244 QN---------FYLLHLCIVREYLELEFQELKEPGAIPFPFDMERVIDDFILMAFFVGND 294
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP++P L I EGA+ L+ +YKK GY+ + K +L R++ ++ + E R F+
Sbjct: 295 FLPNLPRLHINEGALALMFKIYKKVLPKCDGYINENGKVNLDRLKILLEELEQEEYRFFE 354
Query: 297 KR---ARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQ 353
+ + Q E QA+ + + P + L + SP+
Sbjct: 355 QEHEDTKWLQGKKMLENNEAEQAKAKAKGKLIISPSQKALWKQKIRKWLLNSTSPT---- 410
Query: 354 SECVGRLDNGKGTSGRPHK-VPRLSSGATIGAAIVEAENSFE---------TDPQENKEE 403
LD G + K V L+ A I A ++ + E EE
Sbjct: 411 ------LDLGADLNAADRKFVEDLAEAAHIEWATKPDDDGIRHLVLSRPVMDEDDEEDEE 464
Query: 404 FKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERY-------YEEKFNAKTPEEREET 456
A L + + +A D E+ + +K+++ Y K + TP+ E+
Sbjct: 465 AHAALYRIAKRYDNAQVLDLSSEEAKAAVQEKYKQKFQEWKDKYYLSKMDGWTPQNLEQE 524
Query: 457 RKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPF 516
K + Y +GL WV++YYY G+ SW WFY YHYAP SD+ +++F+LG PF+P
Sbjct: 525 LKKMAENYVQGLQWVLYYYYRGIASWPWFYGYHYAPMISDVVKGLGADLNFKLGQPFRPN 584
Query: 517 NQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDE 576
QL+GV P S +P+ Y LMTDPNSPI DFYP +FE+D+NGK+ W+ + K+PFIDE
Sbjct: 585 EQLMGVLPDRSKKIVPKVYWDLMTDPNSPIIDFYPREFELDLNGKKMDWEAVVKIPFIDE 644
Query: 577 ARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
RLL+ + LTEEE RN + F
Sbjct: 645 KRLLEAMAPRNALLTEEEKARNEFGVPLKFT 675
>gi|156050179|ref|XP_001591051.1| hypothetical protein SS1G_07676 [Sclerotinia sclerotiorum 1980]
gi|154692077|gb|EDN91815.1| hypothetical protein SS1G_07676 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1390
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 239/656 (36%), Positives = 348/656 (53%), Gaps = 82/656 (12%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + D E R++ REG+++P + + FDSN ITPGTEFM L
Sbjct: 94 MNQQRARRFRTALDV-------ENAREKAIREGKEMPKE---EAFDSNSITPGTEFMQKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
++ L+Y+I +++ D W+ +++LS VPGEGEHKIM Y+RL++ P YDPN RHCLY
Sbjct: 144 TLQLKYFIAKKISEDVDWQGTEIVLSGHEVPGEGEHKIMEYIRLKKAQPDYDPNRRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+Q K K+ E +
Sbjct: 204 GLDADLIMLGLLSHDPHFCLLREEV-TFGRQSKA-------------------KSKELEH 243
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFR------IPNPPFEIDLECIVDDFIFMCFFVG 234
+ + +H+ +REYL+ EF+ + PF DLE ++DDFI M FFVG
Sbjct: 244 QN---------FYLMHLCIVREYLELEFQELKGDGVLGFPF--DLERVIDDFILMAFFVG 292
Query: 235 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI 294
NDFLP++P L I EGA+ L+ VYK GGY+ +G ++ R+ + + E R
Sbjct: 293 NDFLPNLPNLHINEGALALMFKVYKTILPKGGGYINEGGVINMSRLAILLDELSHVEYRF 352
Query: 295 FQKRARLHQR-HAERIKREKAQAR---RGDDVEPLAQPDSLVPVSRF---HGSRLASGPS 347
F+ + A+++ +E + +G V AQ V + G+
Sbjct: 353 FESESSDSSWFKAKQMSKEDVMVKGKNKGKLVMTTAQQQIWKQVKSYVQKRGTEALDLSE 412
Query: 348 PSPYQQSECVGRLDNG--------KGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQE 399
P + L + G H +LS A +GA E ++ E + Q
Sbjct: 413 KLPAADRKFAQDLAESLHLEWKTVQSDDGERHM--QLSFPAKLGADDDEEDDDEEEESQL 470
Query: 400 N-----KEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEERE 454
K+ KA++ ++ R+++ A D E+K + WK++YY+ KF E E
Sbjct: 471 AIMRIVKQYDKAEVLDVTREQAQA-EMDRKYEEKFQ----EWKDKYYDGKFEWDRKNETE 525
Query: 455 ETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFK 514
T ++ Y +GL WV++YYY GV SW W+Y YHY+P SD+ + +++F+LG PF
Sbjct: 526 LT--NLCENYVQGLQWVLYYYYRGVVSWPWYYQYHYSPMISDVIKGLKADVNFKLGQPFH 583
Query: 515 PFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFI 574
PF QL+GV P S +P Y LMT+P SPI DFYP DFE+DMNGK+ W+ + K+PFI
Sbjct: 584 PFEQLMGVLPDRSKKIVPTVYHDLMTNPASPIIDFYPRDFELDMNGKKMEWEAVVKIPFI 643
Query: 575 DEARLLDEVKKIEHTLTEEEARRNSIMADMLF-----VLLSHPLS-ASIYTLDEHC 624
DE RLLD + + L++ E RN + F V ++P S I+ HC
Sbjct: 644 DEKRLLDAMATKNNLLSDAEKARNEFGVSLKFTYDPDVDFTYPSSLVGIFPDIAHC 699
>gi|115437844|ref|XP_001217914.1| hypothetical protein ATEG_09292 [Aspergillus terreus NIH2624]
gi|114188729|gb|EAU30429.1| hypothetical protein ATEG_09292 [Aspergillus terreus NIH2624]
Length = 1413
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 243/635 (38%), Positives = 337/635 (53%), Gaps = 79/635 (12%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA A+E+ + Q E PK D+ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRARRFRTALDA--EVAKEKAIAQGVEM------PKEDA--FDSNCITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+I +++ D W+ ++++LS VPGEGEHKIM Y+R + PGYDPN RHCLY
Sbjct: 144 TEQLKYFISKKISEDKDWQGVEIVLSGHEVPGEGEHKIMEYIRHAKAQPGYDPNVRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+Q ++K E +
Sbjct: 204 GLDADLIMLGLLSHDPHFCLLREEV-TFGRQ-------------------VQKKPKELEH 243
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNP----PFEIDLECIVDDFIFMCFFVGND 236
+ + LH+ +REYL+ EF+ F D+E ++DDFI M FFVGND
Sbjct: 244 QN---------FYLLHLSMVREYLELEFQELEQEGALKFPFDMERVIDDFILMAFFVGND 294
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP++P L I EGA+ L+ +YK+ +GGY+ + +L R+ + + E R F+
Sbjct: 295 FLPNLPNLHINEGALALMFKIYKEILPKMGGYINEQGVINLERLGVLLDGLSDVEFRFFE 354
Query: 297 KR---ARLHQRHAERIKREKAQAR-RGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQ 352
AR + + + Q + +G V P AQ D V ++ +R P
Sbjct: 355 AEYSDARWIKAKKNGTETMELQEKPKGLTVTP-AQKDLFKDVKKYVLNRPGKAADTKP-- 411
Query: 353 QSECVGRLDNGKGTSGRPHK-VPRLSSGATIGAAIVEAENS-------FETDP-----QE 399
LD R K V +L+ + V E+ F P +E
Sbjct: 412 -------LDFPSSLPARDRKFVEQLADDLRLPWTTVSDEHGERFIRLQFPEIPGDDSDEE 464
Query: 400 NKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPG-------WKERYYEEKFNAKTPEE 452
EE ++ ++R +A + E+ K E WK++YY KF+ E
Sbjct: 465 EDEEASMAVQRVIRKYDNAKVQEVSAEEAQKAAEKKYEEKFQEWKDKYYTSKFDWGL-EN 523
Query: 453 REETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHP 512
EE RK + Y +GL WV+ YYY G+ SW WF+ YHYAP SD+K + +++F LG P
Sbjct: 524 AEEMRK-LTENYVQGLQWVLFYYYRGIASWPWFFGYHYAPMISDVKKGLKADMNFRLGQP 582
Query: 513 FKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLP 572
F+P+ QL+GV P S +P YR LMT P SPI DFYP DFE+DMNGK+ W+ + K+P
Sbjct: 583 FRPYEQLMGVLPDRSKKIVPPAYRDLMTSPESPIIDFYPRDFELDMNGKKMEWEAVVKIP 642
Query: 573 FIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
FIDE RLLD +K EH LT +E RN A + F
Sbjct: 643 FIDEKRLLDALKTREHLLTPDEKARNGFGASLKFT 677
>gi|71028722|ref|XP_764004.1| exoribonuclease [Theileria parva strain Muguga]
gi|68350958|gb|EAN31721.1| exoribonuclease, putative [Theileria parva]
Length = 958
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 240/658 (36%), Positives = 335/658 (50%), Gaps = 127/658 (19%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
+NQQRSRRF+++ A + L +++E+ K +DSNVITPGTEFM L
Sbjct: 125 INQQRSRRFKSAALADLEDETYDTLIRDYEKRYGKTDLIVRKSKWDSNVITPGTEFMYKL 184
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S L YI R W++I VI SD+NVPGEGEHKIM ++R QR+ P YDPNTRH L+
Sbjct: 185 SEKLMEYIEDRAERYDAWKRIVVIFSDSNVPGEGEHKIMKFIRNQRHCPDYDPNTRHVLH 244
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQ----------DKCFLCGQPGHLAANCEGK 170
G+DADLIML LATHE +F ILRE+V + + +P + EG
Sbjct: 245 GMDADLIMLGLATHEPNFFILREIVTFFTNPTTNNTENAIANTLNIVSKPFKNTESAEGV 304
Query: 171 AKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFE----IDLECIVDDF 226
K + KP QFL + LREYL ++ R P FE +D E VDD
Sbjct: 305 QKYLKMMRENW--------KPLQFLQLPVLREYLSHQLRFP-LGFENGEMVDFERCVDDL 355
Query: 227 IFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQA 286
+ M FF GNDFLP++P++ I G+I+ ++ +Y+K AL YL+D K + + F +
Sbjct: 356 VLMIFFCGNDFLPNLPSISITGGSIDQMLLLYQKVLPALNDYLSDEGKLNFHAITSFFEL 415
Query: 287 VGSYEDRIFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGP 346
+ ED F+ +H+ + KAQ+R+ ++
Sbjct: 416 LSKIEDETFKN---IHEF------KMKAQSRKQNN------------------------- 441
Query: 347 SPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKA 406
L++ T+ S+G + G S +++ + ++ FK
Sbjct: 442 ------------ELNSADATND--------SNGHSEGTG------SDKSEEERIEDRFKK 475
Query: 407 KLKELLRDKSDAFNSDNPEED-----KVKLGEPG-WKERYYEEKFNA--KTPEEREETRK 458
+LKE + NS N ++D V L +P WKE YY EKFN K EE ++ +
Sbjct: 476 ELKERI-------NSCNVKDDVKLPVDVTLNDPKLWKEAYYREKFNLGDKNQEEIDKFVQ 528
Query: 459 DVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDL-----KDLDQFN--------- 504
+ Y +G+CWV+ YYY+G SW W+Y YHY+PF SDL + L+ +
Sbjct: 529 KLSFDYIKGICWVLQYYYQGCPSWSWYYRYHYSPFCSDLHFSGLQSLEDYKSESQSEGEA 588
Query: 505 ---------------ISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDF 549
I F+LG P PF QL+GV P SSH LPE R LMTDP+SP+ +F
Sbjct: 589 NLKRRHDSLEMGVKMIKFDLGVPLTPFQQLMGVMPIRSSHCLPEKLRTLMTDPDSPLREF 648
Query: 550 YPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
YPT F D NGKRY +Q +A LPFIDE +LL VK IE L+EEE RN +++ +
Sbjct: 649 YPTKFREDPNGKRYKYQWVALLPFIDEKKLLTHVKPIEDELSEEEKIRNRTSNNLIIL 706
>gi|320580141|gb|EFW94364.1| 5'-3' exoribonuclease, putative [Ogataea parapolymorpha DL-1]
Length = 1369
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 235/671 (35%), Positives = 353/671 (52%), Gaps = 97/671 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR SA E E+ ++ +EG+++P + FDSN ITPGTEFMA L
Sbjct: 40 MNQQRARRFR-------SAIEAEQNLEKAIKEGKEIPKEPP---FDSNAITPGTEFMAKL 89
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L++YI+ + ++D W+ +++ILS VPGEGEHKIM ++R Q+ P YDPNTRHC+Y
Sbjct: 90 TQNLKFYINQKASSDSRWQNMRIILSGHEVPGEGEHKIMDFIRTQKAQPDYDPNTRHCVY 149
Query: 121 GLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADLIML L HE HF++LRE V F P AN
Sbjct: 150 GLDADLIMLGLVAHEPHFALLREEVTFGP---------------KANSHS---------- 184
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDF 237
D++ ++ + LHI +REY++ EF+ FE D E I+DDFI + + +GNDF
Sbjct: 185 --DDDLT--QQTFFLLHISLVREYMELEFQELQDQLSFEYDFERIIDDFILIMYVIGNDF 240
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
LP++P L + +GA LL+ +K+ R + GY+ + +L+R +++ + +E F+K
Sbjct: 241 LPNLPDLHLNKGAFPLLIETFKEAIRDMDGYINEFGTINLQRFGKWLEYLSVFELENFEK 300
Query: 298 ---RARLHQRHAERIKRE--KAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQ 352
+ + I ++ K + R+G ++ L Q V + R R+ S +
Sbjct: 301 GEVDVEWFNKQLDNISKQGMKKRLRQGKEL-LLKQQKKFVGLVREWIYRVYS-------E 352
Query: 353 QSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFE------------------ 394
+ + L++ P +PR + + I ++ A+ FE
Sbjct: 353 KFDVKAMLEDESKVPELP--LPREAFDSEINRDVI-AKFLFELGVVVIHSKSQDTYTARL 409
Query: 395 ----TDPQENKEEFKAK---LKELLRDKSDAFNSDNPE-----EDKVKLGEPGWKERYYE 442
+P E EEF + ++ +++ A ++ E +D WK YY+
Sbjct: 410 DVDGINPDETDEEFNERVEGIRRVIKKYQTAIVVEDEETLESQKDLYDARFVKWKNEYYK 469
Query: 443 EKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQ 502
+K +E + +D+ Y EGL WV++YYY+G+ SW W+Y YHYAP SD+
Sbjct: 470 KKVGFSLNDE--DKIRDMAENYIEGLQWVLNYYYKGISSWPWYYRYHYAPRISDVSKGLN 527
Query: 503 FNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKR 562
I+FE GHPFKPF QL+ V P+ S +P YR LMTD NSPI DFYP D EVDMNGK+
Sbjct: 528 VKINFEKGHPFKPFQQLMAVLPARSKELIPTVYRPLMTDSNSPIIDFYPDDCEVDMNGKK 587
Query: 563 YSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF-------VLLSHPLSA 615
W+ + L F+DE RL++ + + L+ EE +RNS D+ F L+ PL A
Sbjct: 588 APWEAVVLLSFVDEKRLIEAMAPFDSKLSPEEKQRNSFGTDLQFHFNPQIKHLIKSPLPA 647
Query: 616 SIYTLDEHCKQ 626
S + HC +
Sbjct: 648 SFSDFESHCTE 658
>gi|19114394|ref|NP_593482.1| exonuclease II Exo2 [Schizosaccharomyces pombe 972h-]
gi|729456|sp|P40383.1|XRN1_SCHPO RecName: Full=5'-3' exoribonuclease 1; AltName: Full=Exonuclease 2;
AltName: Full=Exonuclease II; Short=Exo II; AltName:
Full=p140
gi|531022|gb|AAB42181.1| deoxyribonuclease [Schizosaccharomyces pombe]
gi|2370486|emb|CAB11514.1| exonuclease II Exo2 [Schizosaccharomyces pombe]
Length = 1328
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 236/625 (37%), Positives = 336/625 (53%), Gaps = 69/625 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR +KDA D+ R + ER G P + FDSN ITPGT FM +
Sbjct: 94 MNQQRSRRFRTAKDAHDA-------RLKAERNGEDFPEEQ----FDSNCITPGTTFMERV 142
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S L Y+IH ++ ND W+ I+VI S + PGEGEHKIM Y+R Q+ P Y+PNTRHCLY
Sbjct: 143 SRQLYYFIHKKVTNDSQWQNIEVIFSGHDCPGEGEHKIMEYIRTQKAQPSYNPNTRHCLY 202
Query: 121 GLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADLIML L +H+ HF +LRE V F P +++ +K A +
Sbjct: 203 GLDADLIMLGLLSHDPHFCLLREEVTFGPASRNR-----------------SKELAHQ-- 243
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEI--DLECIVDDFIFMCFFVGNDF 237
+ LH+ LREYL++EF+ F DLE I+DDFI + FFVGNDF
Sbjct: 244 -----------KFYLLHLSLLREYLEFEFQECRSTFTFKYDLEKILDDFILLAFFVGNDF 292
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
LPH+P L I EGA+ L+ ++YKK + GGY+ + ++ R+E + + ++E IF+
Sbjct: 293 LPHLPGLHINEGALALMFSIYKKVMPSAGGYINEKGVINMARLELILLELENFEKEIFKA 352
Query: 298 RARLHQRHAERIKRE----KAQARRGDDVEPLA--QPDSLVPVSRFHGSR---LASGPSP 348
+ + K K +D++ + Q + + + +F SR + +
Sbjct: 353 EVSETKNNGNSDKPSFDFLKYITESTNDIKAMTGEQKNYFLQIKKFLSSREPFIDFSANI 412
Query: 349 SPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKL 408
S Q + RL N S K+ ++ + + E + E + + ++E + L
Sbjct: 413 SSVDQ-RFLRRLCNDLHLSFS--KIIKVDGTHLLRITFRDLEFNDEDEDEIEQDEIERVL 469
Query: 409 KEL----LRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRY 464
++ L ++ A N E+D ++ WK+ YY K +E E K + RY
Sbjct: 470 QKYDNIPLLNEEQALKEKNVEKDFIQ-----WKDDYYRSKVGFSYYDE--EALKAMAERY 522
Query: 465 TEGLCWVMHYYYEGVCSWQWFYPYHYAPFASD-LKDLDQFNISFELGHPFKPFNQLLGVF 523
EGL WV+ YYY G SW W+Y YH+AP SD LK LD I F++G PF+PF QL+ V
Sbjct: 523 VEGLQWVLFYYYRGCQSWGWYYNYHFAPKISDVLKGLD-VKIDFKMGTPFRPFEQLMAVL 581
Query: 524 PSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEV 583
P+ S +P +R LM + SPI DFYP +F +D NGK SW+ + +PFIDE RL+D +
Sbjct: 582 PARSQALVPPCFRDLMVNSESPIIDFYPENFALDQNGKTASWEAVVIIPFIDETRLIDAL 641
Query: 584 KKIEHTLTEEEARRNSIMADMLFVL 608
+ LTEEE +RNS A +F L
Sbjct: 642 ASKDKFLTEEERKRNSFNAPTVFSL 666
>gi|322696208|gb|EFY88004.1| exonuclease [Metarhizium acridum CQMa 102]
Length = 1386
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 226/634 (35%), Positives = 333/634 (52%), Gaps = 70/634 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA E+ R++ +EG ++P + + FDSN ITPGTEFMA L
Sbjct: 60 MNQQRARRFRTALDA-------EKAREKAIKEGVEMPKE---EPFDSNCITPGTEFMAKL 109
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S L+Y+++ +++ D W+ +++LS VPGEGEHKIM Y+R + P Y+PN RHCLY
Sbjct: 110 SQQLRYFVNKKVSEDADWQGCEIVLSGHEVPGEGEHKIMEYIRNAKAQPNYNPNVRHCLY 169
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+ +K K+ E +
Sbjct: 170 GLDADLIMLGLLSHDPHFCLLREEV-TFGR-------------------ASKTKSKELEH 209
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIP----NPPFEIDLECIVDDFIFMCFFVGND 236
+ + LH+ +REYL+ EF+ F DLE ++DDFI M FFVGND
Sbjct: 210 QN---------FYLLHLCIVREYLEMEFQELHQEGTLSFPFDLERVIDDFILMAFFVGND 260
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP++P L I EGA+ + +YK GY+ + ++ R++ + + E F+
Sbjct: 261 FLPNLPGLHINEGALANMFKIYKAVLPTCDGYINENGVINMARLDKLLTELSKLELVSFE 320
Query: 297 KRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSEC 356
+ A + +K +A+ G + A+ LV S R P+
Sbjct: 321 NDISDEKWFASKQMEKKLEAKTGGSNKN-AKTGQLVITSL---QRDLWKQKIRPFVSKRS 376
Query: 357 VGRLDNGKGTSGRPHKVPR-LSSGATIGAAIVEAEN-------SFETDPQENKEEFKAKL 408
V LD G K + ++ + + E EN SF P +++E + +
Sbjct: 377 VDALDLGITLKAADRKFAQDIADAMHLDWSTKENENGDRHLVLSFPARPGGDEDEDENEE 436
Query: 409 K--------ELLRDKSDAFNSDNPEEDKVKLGE-------PGWKERYYEEKFNAKTPEER 453
+ +++ A D E+ + E GWK +YY +KF PE+
Sbjct: 437 EEEGNLAAFRVIKSYDKALVVDVTSEEAQQQYEKLYNEKYAGWKTKYYLQKFPEWDPEKY 496
Query: 454 EETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPF 513
E+ + D+ Y +GL WV+ YYY+G+ SW WFY YHYAP SD+ +++F+ G PF
Sbjct: 497 EKEQIDLCQNYVQGLQWVLFYYYKGIASWPWFYGYHYAPLISDVAKGLNADLNFKKGQPF 556
Query: 514 KPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPF 573
KP+ QL+GV P S +P+ Y LMT+PNSPI DFYP DFE+DMNGK+ W+ + K+PF
Sbjct: 557 KPYEQLMGVLPDRSKKIVPKVYHDLMTNPNSPIIDFYPRDFELDMNGKKMDWEAVVKIPF 616
Query: 574 IDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
I+E RLLD + L ++E RN + F
Sbjct: 617 IEEKRLLDAMATKNDLLEDDEKSRNGFGVPIKFT 650
>gi|116199173|ref|XP_001225398.1| hypothetical protein CHGG_07742 [Chaetomium globosum CBS 148.51]
gi|88179021|gb|EAQ86489.1| hypothetical protein CHGG_07742 [Chaetomium globosum CBS 148.51]
Length = 1420
Score = 374 bits (960), Expect = e-100, Method: Compositional matrix adjust.
Identities = 229/644 (35%), Positives = 341/644 (52%), Gaps = 99/644 (15%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR +A E E+ R + +EG++LP + + FDSN ITPGTEFMA L
Sbjct: 94 MNQQRARRFR-------TALEAEKARDKAIKEGKELPKE---EPFDSNCITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+I+ +++ D W++ +++LS VPGEGEHKIM Y+R R P Y+PN RHCLY
Sbjct: 144 TQQLKYFINKKVSEDRDWQQPEIVLSGHEVPGEGEHKIMEYIRNARAQPEYNPNVRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+Q AK K+ E +
Sbjct: 204 GLDADLIMLGLLSHDPHFCLLREEV-TFGRQ-------------------AKHKSKELEH 243
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNP----PFEIDLECIVDDFIFMCFFVGND 236
+ + +H+ +REYL+ EF+ F D+E ++DDFI M FFVGND
Sbjct: 244 QN---------FYLMHLCIVREYLELEFQDLKKEGAMSFPFDMEKVIDDFILMAFFVGND 294
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP++P L I EGA+ + +YK GY+ + K +L+R+ + +G E R F+
Sbjct: 295 FLPNLPHLHINEGALATMFRIYKSVLPKCDGYINENGKVNLQRLSRLLDELGKEEYRFFE 354
Query: 297 KRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSEC 356
H+ E R K + D+ E L ++ G + S + ++++
Sbjct: 355 -----HENEDESWLRGK-RMLENDETEKLR--------AKAKGKLIVSSEQKALWKRT-- 398
Query: 357 VGRLDNGKGTSGRPHKVPRLSSGATIGAA-------IVEAEN-SFETDPQEN-------- 400
+ + +G+ L GA + AA + EA + + T P +
Sbjct: 399 IRKFLTNRGSR-------TLDLGAGLNAADRKFVQDLAEAAHLEWATKPDDEGHRHLILS 451
Query: 401 ----------KEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKER-------YYEE 443
EE ++ + +++ +A D D E +KE+ YY++
Sbjct: 452 YPAGDEEDEEDEEAQSAVLRIVKRYDNAQTLDLTSADAQAAMEAKYKEKFQEWKDEYYDQ 511
Query: 444 KFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQF 503
KF TP+ REE + + Y +GL WV++YYY G+ SW WFY YHY+P SD+
Sbjct: 512 KFEDWTPDNREEELRKLTENYVQGLQWVLYYYYRGIASWPWFYAYHYSPMISDVVKGLNA 571
Query: 504 NISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRY 563
+++F+LG PF+P QL+GV P S +P+ Y +LMTDP SPI DFYP DFE+DMNGK+
Sbjct: 572 DLNFKLGQPFRPNEQLMGVLPDRSKKIVPKVYWELMTDPKSPIIDFYPRDFELDMNGKKM 631
Query: 564 SWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
W+ + K+PFI+E RLL + + L++ E RN + F
Sbjct: 632 DWEAVIKIPFIEEKRLLSAMAPKDALLSDAEKARNDFGVALKFT 675
>gi|58267550|ref|XP_570931.1| Exonuclease II [Cryptococcus neoformans var. neoformans JEC21]
gi|57227165|gb|AAW43624.1| Exonuclease II, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 1457
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 236/637 (37%), Positives = 323/637 (50%), Gaps = 89/637 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA KDA D R++ E+ G KLP D + FDSN ITPGT FMA L
Sbjct: 96 MNQQRSRRFRAGKDARDQ-------REKAEKNGEKLP---DEKAFDSNAITPGTPFMARL 145
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S L+YY+ R++ D W I+VILS +VPGEGEHKI ++RL + P Y+PNTRHCLY
Sbjct: 146 SQHLKYYVRKRISEDADWRSIRVILSGHDVPGEGEHKIQEFIRLNKAQPDYNPNTRHCLY 205
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V G+ R+ E
Sbjct: 206 GLDADLIMLGLLSHDPHFCLLREEV---------------------TFGRKSRQNTELAN 244
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFL 238
+ LH+ +REYLD EF FE DLE I+DDFI M FVGNDFL
Sbjct: 245 TN---------FFLLHLSLMREYLDLEFSSLQTQISFEYDLERIIDDFILMAIFVGNDFL 295
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 298
PH+P L I EGA+ + +YK + GY+ + SL R++ + + +E + F+
Sbjct: 296 PHLPDLHINEGALERIWGMYKDILPTIDGYINEHGTISLPRLQLLLDKLAEFEVKRFEDD 355
Query: 299 -------ARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPY 351
+ H R I++ + + R+ V Q L + F + P+P
Sbjct: 356 LLDQVHFSGNHTRDTMVIEKARKKNRK---VITKYQQKVLNQLRSFIEKQ---QNQPNPT 409
Query: 352 QQSECVG---RLDNG--KGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQ-------- 398
+ E + + DN + + H G +++ + E Q
Sbjct: 410 HRLELINTQDKRDNAFVQELADELHLHTTWDEVDDYGQSLIVCTFNMEGVSQDGSADGKE 469
Query: 399 --------ENKEEFKAKLKELLRDKSDAFNSDNPEED-------KVKLGEPGWKERYYEE 443
E ++E K ++ + R+ S A D ED K+K K +YY +
Sbjct: 470 EDGDWESDEMEDEGKLAVQRVFRNWSKAAVVDTYPEDVEKSMDEKLKEAMDDIKRQYYHD 529
Query: 444 KF--NAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLD 501
K N P + + D+V Y EGL W+++YYY+GV SW WFY YHY+P +DLK +
Sbjct: 530 KLEINYNDPAQMQ----DLVHHYIEGLQWILNYYYKGVSSWGWFYKYHYSPRITDLKGVA 585
Query: 502 QFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGK 561
F+ G PF PF QL+GV P S +P YR LM + SPI DFYP +FE+DMNGK
Sbjct: 586 DMKFEFDYGKPFTPFQQLMGVLPVDSMDHVPLAYRDLMYEETSPIIDFYPRNFELDMNGK 645
Query: 562 RYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
+ W+ + K+PFID+ RLL + + LT EE RN
Sbjct: 646 KQDWEAVVKIPFIDQNRLLKAMAARDVRLTPEERERN 682
>gi|134112225|ref|XP_775088.1| hypothetical protein CNBE3620 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257740|gb|EAL20441.1| hypothetical protein CNBE3620 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1473
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 236/637 (37%), Positives = 323/637 (50%), Gaps = 89/637 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA KDA D R++ E+ G KLP D + FDSN ITPGT FMA L
Sbjct: 96 MNQQRSRRFRAGKDARDQ-------REKAEKNGEKLP---DEKAFDSNAITPGTPFMARL 145
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S L+YY+ R++ D W I+VILS +VPGEGEHKI ++RL + P Y+PNTRHCLY
Sbjct: 146 SQHLKYYVRKRISEDADWRSIRVILSGHDVPGEGEHKIQEFIRLNKAQPDYNPNTRHCLY 205
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V G+ R+ E
Sbjct: 206 GLDADLIMLGLLSHDPHFCLLREEV---------------------TFGRKSRQNTELAN 244
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFL 238
+ LH+ +REYLD EF FE DLE I+DDFI M FVGNDFL
Sbjct: 245 TN---------FFLLHLSLMREYLDLEFSSLQTQISFEYDLERIIDDFILMAIFVGNDFL 295
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 298
PH+P L I EGA+ + +YK + GY+ + SL R++ + + +E + F+
Sbjct: 296 PHLPDLHINEGALERIWGMYKDILPTIDGYINEHGTISLPRLQLLLDKLAEFEVKRFEDD 355
Query: 299 -------ARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPY 351
+ H R I++ + + R+ V Q L + F + P+P
Sbjct: 356 LLDQVHFSGNHTRDTMVIEKARKKNRK---VITKYQQKVLNQLRSFIEKQ---QNQPNPT 409
Query: 352 QQSECVG---RLDNG--KGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQ-------- 398
+ E + + DN + + H G +++ + E Q
Sbjct: 410 HRLELINTQDKRDNAFVQELADELHLHTTWDEVDDYGQSLIVCTFNMEGVSQDGSADGKE 469
Query: 399 --------ENKEEFKAKLKELLRDKSDAFNSDNPEED-------KVKLGEPGWKERYYEE 443
E ++E K ++ + R+ S A D ED K+K K +YY +
Sbjct: 470 EDGDWESDEMEDEGKLAVQRVFRNWSKAAVVDTYPEDVEKSMDEKLKEAMDDIKRQYYHD 529
Query: 444 KF--NAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLD 501
K N P + + D+V Y EGL W+++YYY+GV SW WFY YHY+P +DLK +
Sbjct: 530 KLEINYNDPAQMQ----DLVHHYIEGLQWILNYYYKGVSSWGWFYKYHYSPRITDLKGVA 585
Query: 502 QFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGK 561
F+ G PF PF QL+GV P S +P YR LM + SPI DFYP +FE+DMNGK
Sbjct: 586 DMKFEFDYGKPFTPFQQLMGVLPVDSMDHVPLAYRDLMYEETSPIIDFYPRNFELDMNGK 645
Query: 562 RYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
+ W+ + K+PFID+ RLL + + LT EE RN
Sbjct: 646 KQDWEAVVKIPFIDQNRLLKAMAARDVRLTPEERERN 682
>gi|406601833|emb|CCH46556.1| 5'-3' exoribonuclease 1 [Wickerhamomyces ciferrii]
Length = 1519
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 233/641 (36%), Positives = 340/641 (53%), Gaps = 85/641 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA E+ L + +EG ++P + FDSN ITPGTEFMA L
Sbjct: 94 MNQQRARRFRTAVDA------EKNLEKAI-KEGTEIPK---DEPFDSNSITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+IH +++ D W+ +++ILS VPGEGEHKIM ++R ++ Y+PN RHC+Y
Sbjct: 144 TRYLKYFIHKKVSTDSRWQNVQIILSGHEVPGEGEHKIMEFIRTKKASKDYNPNLRHCIY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HF++LRE V T G++ QP
Sbjct: 204 GLDADLIMLGLVSHEPHFALLREEV-TFGRRQ-----TQPK------------------- 238
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFL 238
V ++ + LH+ +REYL+ EF+ F+ D E ++DDFI + + +GNDFL
Sbjct: 239 -----TVEEQKFYLLHLSLVREYLELEFQDLKETISFDYDFERVLDDFILIMYVIGNDFL 293
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK- 297
P++P L + +GA LL+ +K+ R L GY+ + K +L+R+ ++ + +E F++
Sbjct: 294 PNLPDLHLNKGAFPLLIETFKEALRNLDGYINEFGKINLKRLGSWLDILSKFEVENFEQV 353
Query: 298 --RARLHQRHAERIKR--EKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQ 353
+ E I EK + R+G + + Q LV + + + S P +
Sbjct: 354 EVDLEWFNKQLENISLTGEKKRQRQGK-LLIMKQQKKLVGIIKPWLIKTVSVKPNGPVED 412
Query: 354 SEC------VGRLDNGKGTSGRPHKVPRLSSGA-TIGAAIVEA--ENSFET-------DP 397
+ V ++N + L A G I+ + EN++ DP
Sbjct: 413 EQIPSINLPVDVVENN---------LDFLKDFAFDTGLIIIHSKNENTYSVKLDIDGIDP 463
Query: 398 QENKEEFKAKLKELLRDKS--------DAFNSDNPEEDKVKLGEP--GWKERYYEEKFNA 447
E +EEF ++ + R DA D EE +V E WK+ YY+EK
Sbjct: 464 HETEEEFNERVNDTRRIIKRYEAAIILDAEGEDVAEERQVIYNEKFENWKDNYYKEKLEF 523
Query: 448 KTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISF 507
+E + +++ Y EGL WV+ YYY+GV SW W+Y YHYAP SD+K I+
Sbjct: 524 SIKDE--DKLRELTENYVEGLQWVLFYYYKGVQSWPWYYRYHYAPRISDIKKGLDVIINL 581
Query: 508 ELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQG 567
E G PF+PF QL+ V P+ S +P YR LMT+PNSPI DFYP+D E DMNGK W+
Sbjct: 582 EKGTPFRPFEQLMAVLPARSRQLVPAVYRPLMTEPNSPIIDFYPSDVETDMNGKTAEWEA 641
Query: 568 IAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVL 608
+ KL F+D RL D +K LT EE +RNS +D+LF
Sbjct: 642 VVKLSFVDPDRLKDAMKPHNAELTPEEKQRNSFGSDILFTF 682
>gi|84996629|ref|XP_953036.1| exoribonuclease (XRN family member) [Theileria annulata strain
Ankara]
gi|65304032|emb|CAI76411.1| exoribonuclease (XRN family member), putative [Theileria annulata]
Length = 937
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 243/652 (37%), Positives = 334/652 (51%), Gaps = 116/652 (17%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
+NQQRSRRF+++ A + L +++E+ K +DSNVITPGTEFM L
Sbjct: 125 INQQRSRRFKSAALADLEDETYDTLIKDYEKRYGKTNLIVRKSKWDSNVITPGTEFMYKL 184
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S L YI R+ W+ I VI SD+NVPGEGEHKIM ++R QR+ P YDPNTRH L+
Sbjct: 185 SEKLIEYIEDRIEKYDAWKIIVVIFSDSNVPGEGEHKIMKFIRNQRHCPDYDPNTRHVLH 244
Query: 121 GLDADLIMLALATHEVHFSILREVVF---TPGQQDKCFLCGQPGHLAANCEGKAKRKAGE 177
G+DADLIML LATHE +F ILRE+V P + + + + +G+
Sbjct: 245 GMDADLIMLGLATHEPNFFILREIVTFFSNPTTNNSEKAIANTIDTVSKTQNTTQ-SSGD 303
Query: 178 FDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFE----IDLECIVDDFIFMCFFV 233
++ + KP QFL + LREYL ++ R P FE +D E +DD + M FF
Sbjct: 304 VEKYMKMMRENWKPLQFLQLPVLREYLSHQLRFP-LGFENGEMVDFERCIDDLVLMIFFC 362
Query: 234 GNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDR 293
GNDFLP++P++ I G+I+ ++ +Y+K L YL+D + + + F + + ED
Sbjct: 363 GNDFLPNLPSISITGGSIDQMLLLYQKILPTLEDYLSDEGRLNFHTITQFFELLSKIEDE 422
Query: 294 IFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQ 353
F+ H +I K+Q RR +D DS
Sbjct: 423 TFK------NIHEFKI---KSQNRRQND-------DS----------------------- 443
Query: 354 SECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLR 413
N K T+ S G + EA +S + + +++F +LKE
Sbjct: 444 --------NSKVTND--------SGGNS------EANSSDKGGEERIEDKFMKELKE--- 478
Query: 414 DKSDAFNSDNPEED-----KVKLGEPG-WKERYYEEKFNA--KTPEEREETRKDVVLRYT 465
NS N ++D V L +P WKE YY EKFN KTPEE E+ + + Y
Sbjct: 479 ----KMNSSNVKDDVKLPVDVTLNDPKLWKEAYYREKFNLGDKTPEEIEKFVQKLSFDYI 534
Query: 466 EGLCWVMHYYYEGVCSWQWFYPYHYAPFASDL----------------KDLDQFN----- 504
+G+CWV+ YYY+G SW W+Y YHY+PF SDL KD D+ N
Sbjct: 535 KGICWVLQYYYQGCPSWSWYYRYHYSPFCSDLNFSGIQSPEDYSCESVKD-DESNLKRRH 593
Query: 505 ---------ISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 555
I F+L P PF QL+GV P SSH +PE R LMTD +SP+ +FYPT F
Sbjct: 594 NTLETGVKMIKFDLDVPLTPFQQLMGVMPIRSSHCIPEKLRTLMTDVDSPLREFYPTKFR 653
Query: 556 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
D NGKRY +Q +A LPFIDE +LL VK IE L+EEE RN +++ +
Sbjct: 654 EDPNGKRYKYQWVALLPFIDEKKLLKHVKPIEDELSEEEKVRNRTSNNLIKI 705
>gi|164424738|ref|XP_960925.2| hypothetical protein NCU06678 [Neurospora crassa OR74A]
gi|157070639|gb|EAA31689.2| hypothetical protein NCU06678 [Neurospora crassa OR74A]
Length = 1415
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 231/628 (36%), Positives = 337/628 (53%), Gaps = 66/628 (10%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR +A + E+ R + REG++LP + + FDSN ITPGTEFMA L
Sbjct: 59 MNQQRARRFR-------TALDNEKARDKAIREGKELPKE---EPFDSNCITPGTEFMAKL 108
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S L+Y+IH +++ D W++ +++LS VPGEGEHKIM Y+R R YD N RHCLY
Sbjct: 109 SQQLRYFIHKKVSEDRDWQQPEIVLSGHEVPGEGEHKIMEYIRNARAQLDYDANVRHCLY 168
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+ G +K KA +E
Sbjct: 169 GLDADLIMLGLLSHDPHFCLLREEV-TFGR------------------GPSKHKAKGLEE 209
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGND 236
+ + +H+ +REYL+ EF+ P F D+E ++DDFI M FFVGND
Sbjct: 210 QN---------FYLMHLCIVREYLELEFQDLKKPGAMSFPFDMEKVIDDFILMAFFVGND 260
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP++P L I EGA++L+ +YK+ GY+ +G K +L+R+ ++ +G E R F+
Sbjct: 261 FLPNLPRLHINEGALSLMFRIYKEILPRGDGYINEGGKVNLQRLGLLLEELGKEEYRFFE 320
Query: 297 KRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSEC 356
H+ + R K + A+ + V+ + + +
Sbjct: 321 -----HEHEDQSWLRAKKMLEDNEAETAKAKTKGKLIVTTNQKNLWKQ--KIRKFLMNRS 373
Query: 357 VGRLDNGKGTSGRPHK-VPRLSSGATIGAAIVEAEN-------SFETDPQENKEEFKAK- 407
LD G K V L+ A I A E + SF E++E+ +A+
Sbjct: 374 TNTLDLGTELKAEDRKFVQDLADTAHIPWATKEDDEGHRHLILSFPERDDESEEDEEAQS 433
Query: 408 -LKELLRDKSDAFNSDNPEEDKVKLGEPGWKERY-------YEEKFNAKTPEEREETRKD 459
+ +++ +A D D E +++++ Y EKF TPE +E+ +
Sbjct: 434 AVLRIIKKYDNAQVLDLTAADSKAAMEVKYQQKFQEWKDKYYAEKFEDWTPENKEDELRK 493
Query: 460 VVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQL 519
+ Y +GL WV++YYY G+ SW WFY YHYAP SD+ + +++F++G PFKP+ QL
Sbjct: 494 LTENYVQGLQWVLYYYYRGIASWPWFYRYHYAPLISDVMKGLKADLNFKMGQPFKPYEQL 553
Query: 520 LGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARL 579
+GV P S +P Y LMT+PNSPI DFYP DFE+DMNGK+ W+ + K+PFIDE RL
Sbjct: 554 MGVLPDRSKKIVPTAYWDLMTNPNSPIIDFYPRDFELDMNGKKMDWEAVVKIPFIDEKRL 613
Query: 580 LDEVKKIEHTLTEEEARRNSIMADMLFV 607
L + L++ E RN + F
Sbjct: 614 LAAMGPKNELLSDVEKSRNDFGVALKFT 641
>gi|169615619|ref|XP_001801225.1| hypothetical protein SNOG_10969 [Phaeosphaeria nodorum SN15]
gi|111060348|gb|EAT81468.1| hypothetical protein SNOG_10969 [Phaeosphaeria nodorum SN15]
Length = 1439
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 230/635 (36%), Positives = 330/635 (51%), Gaps = 75/635 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA E+ R + REG ++P + + FDSN ITPGT FMA L
Sbjct: 94 MNQQRARRFRTALDA-------EKARDKAIREGVEMPKE---EAFDSNCITPGTAFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+I+ +++ D W+ ++V+LS VPGEGEHK+M Y+R + PGYDPN RHCLY
Sbjct: 144 TQQLKYFINKKVSEDMDWQGVEVVLSGHEVPGEGEHKVMEYIRQAKAQPGYDPNRRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+Q ++ K+ E +
Sbjct: 204 GLDADLIMLGLLSHDPHFCLLREEV-TFGRQ-------------------SQTKSKELEH 243
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGND 236
+ + +H+ +REYL+ EF+ P F D+E ++DDFI M FFVGND
Sbjct: 244 QN---------FYLMHLCIVREYLELEFQELAEPGALGFPFDMERVIDDFILMAFFVGND 294
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP++P L I EGA+ L+ VYK GY+ + ++ R+ + + E R F+
Sbjct: 295 FLPNLPHLHINEGALALMFNVYKTVLPKGKGYINEEGVINMERLVLLLDELSQIEYRHFE 354
Query: 297 -KRARLHQRHAERIKREKAQ---ARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQ 352
+ A +R+++E ARRG + Q + + G L P+P
Sbjct: 355 SENADAAWFKGKRLEKEDVMQKTARRGTVIMSTQQKQLFSKIKSWLGHYLEK-KEPAPLD 413
Query: 353 QSECVGRLDNG--KGTSGRPHKV------------------PRLSSGATIGAAIVEAENS 392
+ D + + + H V P+L + S
Sbjct: 414 LPVELNAEDRKFVQELADKLHLVWKTVQNDDGDRHIQVSAPPKLVEDDEDDEDDNMDDES 473
Query: 393 FETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEE 452
+ + ++ AK+ ++ A ++ N + K WK YY+ KF E
Sbjct: 474 TKAITRVIQKYEAAKIVDI-----SAEDAQNEMQKKYDEKFDAWKNDYYKSKFEWDRSNE 528
Query: 453 REETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHP 512
EE RK + Y +GL WV++YYY GV SW W+Y YHY+P SD+K + NI F+LG P
Sbjct: 529 -EELRK-LTENYVQGLQWVLYYYYRGVASWPWYYGYHYSPMISDVKRGIKANIDFKLGQP 586
Query: 513 FKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLP 572
FKPF QL+GV P S +P+ Y LMT +SPI DFYP DF +DMNGK+ W+ + K+P
Sbjct: 587 FKPFQQLMGVLPDRSKSIVPKAYHPLMTSEDSPIIDFYPRDFTLDMNGKKQDWEAVVKIP 646
Query: 573 FIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
FI+E RLL + E LT +E RNS + F
Sbjct: 647 FIEEDRLLKAMATKEDDLTADEKSRNSFGVSLKFT 681
>gi|302416751|ref|XP_003006207.1| 5'-3' exoribonuclease [Verticillium albo-atrum VaMs.102]
gi|261355623|gb|EEY18051.1| 5'-3' exoribonuclease [Verticillium albo-atrum VaMs.102]
Length = 1383
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 225/631 (35%), Positives = 329/631 (52%), Gaps = 93/631 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR + DA E R++ ++G ++P ++ FDSN ITPGTEFMA L
Sbjct: 95 MNQQRSRRFRTALDA-------ENAREKAIKDGVEMPKEAP---FDSNCITPGTEFMAKL 144
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S L+Y+++ ++ D W++ +++LS VPGEGEHKIM Y+R + P YD N RHCLY
Sbjct: 145 SRQLKYFVNKKVTEDADWQECEIVLSGHEVPGEGEHKIMEYIRNAKAQPDYDTNVRHCLY 204
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+ +K K+ E +
Sbjct: 205 GLDADLIMLGLLSHDPHFCLLREEV-TFGR-------------------ASKTKSKELEH 244
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFR------IPNPPFEIDLECIVDDFIFMCFFVG 234
+ + LH+ +REYLD EF+ I N P+ DLE ++DDFI M FF+G
Sbjct: 245 QN---------FYLLHLCIVREYLDLEFQELKQDGILNFPY--DLERVIDDFILMGFFIG 293
Query: 235 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI 294
NDFLPH+P L I EGA+ + +YK GY+ +G +L+R++ + E +
Sbjct: 294 NDFLPHLPRLHINEGALAYMFRIYKSILPECDGYINEGGVINLQRLQPMVPIEAISEQQ- 352
Query: 295 FQKRARLHQRHAERIKREKAQARRGDD-VEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQ 353
QK A ++ + + AQ + ++P + P+P P
Sbjct: 353 -QKNAAQSKQRGKGVVMTSAQRDLWKNYIKP-----------------YLTKPTPEP--- 391
Query: 354 SECVGRLDNGKGTSGRPHK-VPRLSSGATIGAAIVEAENS----FETDPQENKEEFKAKL 408
LD G + K V L+ + + E ++ T PQ + +
Sbjct: 392 ------LDLGTELNAADRKFVQDLADAVHVDWSTKEDDDGHRHLILTSPQSEDNNEEEEE 445
Query: 409 KELLR-------DKSDA--FNSDNPEE---DKVKLGEPGWKERYYEEKFNAKTPEEREET 456
L DK+ +D+ ++ D K GWK +YY +KF P+ ++
Sbjct: 446 GTLALFRVMKNYDKATVVDITADDAKQHYADLYKQKYQGWKTKYYLQKFEDWAPDNYDKE 505
Query: 457 RKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPF 516
+ Y +GL WV++YYY G+ SW WFY YHY+P SD+ +++F+LG PF+P+
Sbjct: 506 LTALCENYVQGLQWVLYYYYRGIASWPWFYAYHYSPLTSDVIKGLGADLNFKLGQPFRPY 565
Query: 517 NQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDE 576
QL+GV P S +P Y LMT+P SPI DFYP DFE+DMNGK+ W+ + K+PFIDE
Sbjct: 566 EQLMGVLPDRSKSIVPTVYWDLMTNPKSPIIDFYPRDFELDMNGKKMEWEAVVKIPFIDE 625
Query: 577 ARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
RLLD + + L+++E RN + F
Sbjct: 626 KRLLDAMGPVNEELSDDEKSRNQFGVSLKFT 656
>gi|254571103|ref|XP_002492661.1| Evolutionarily-conserved 5'-3' exonuclease component of cytoplasmic
processing (P) bodies [Komagataella pastoris GS115]
gi|238032459|emb|CAY70482.1| Evolutionarily-conserved 5'-3' exonuclease component of cytoplasmic
processing (P) bodies [Komagataella pastoris GS115]
gi|328353336|emb|CCA39734.1| 5'-3' exoribonuclease 1 [Komagataella pastoris CBS 7435]
Length = 1451
Score = 371 bits (952), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 238/641 (37%), Positives = 342/641 (53%), Gaps = 85/641 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR + +A S E ++ + K ++ FDSN ITPGTEFMA +
Sbjct: 93 MNQQRSRRFRTAIEAEKSV--------EIAQKNGLITSKDEN--FDSNCITPGTEFMAKV 142
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+++IH ++++D W+K++VILS VPGEGEHKIM Y+R + GYDPNTRHC+Y
Sbjct: 143 TTNLKFFIHQKISSDAKWQKVQVILSGHEVPGEGEHKIMDYIRFLKAQEGYDPNTRHCIY 202
Query: 121 GLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADLIML L H+ HF+ILRE VVF G KA D
Sbjct: 203 GLDADLIMLGLVIHDPHFAILREEVVFGRGS-----------------------KASSTD 239
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
V ++ + LH+ LREYL EF+ F+ DLE I+DDFIF+ + +GNDF
Sbjct: 240 -------VSEQQFYLLHLSLLREYLALEFKDLEDQIKFDYDLERILDDFIFIMYVIGNDF 292
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
LP++P L I +GA L+A K+ GYL +G ++ R ++ + +E + F++
Sbjct: 293 LPNLPDLHINKGAFPRLLATIKETMIDSDGYLQEGGVINMERFGLWLDHLSQFELQNFEQ 352
Query: 298 R---ARLHQRHAERI------KREKA----QARRGDDVEPLAQPDSLVPVSRFHGSRLAS 344
+ E I KRE+A RR ++ +P L F+ SR
Sbjct: 353 VDVDVEWFNKQLENISLDGERKRERAGRKLLLRRQQELISKLRPWIL----EFYSSR--- 405
Query: 345 GPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGAT-IGAAIV--EAENSFE------- 394
S + + L K+P + A +G IV +++N++
Sbjct: 406 DNIYSAHDDDSLIPTLQLDTELMEEEIKLPFIKQFALDVGFFIVHSKSQNTYHAKIDIDG 465
Query: 395 TDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGE---------PGWKERYYEEKF 445
+ E+ EEF+A++ +R K + + ED+ L E WK +YY+EKF
Sbjct: 466 INVNESDEEFEARVL-YIRKKIKEYENSIFVEDENTLEEQKNIYDTKFVNWKNKYYKEKF 524
Query: 446 NAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNI 505
T + E+ K + Y +GL WV+ YYY GV SWQW+YPY+YAP SD+K + +
Sbjct: 525 GF-TLSDTEDILK-LTESYIQGLQWVLFYYYRGVPSWQWYYPYYYAPRISDIKLGIKACL 582
Query: 506 SFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSW 565
F+ G PFKPF QL+ V P+ S +P YR LMTDPNSPI +FYP + E+D NGK SW
Sbjct: 583 EFDKGTPFKPFEQLMAVLPARSKQLVPACYRPLMTDPNSPIIEFYPDEVEIDKNGKTASW 642
Query: 566 QGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 606
+ + K+ F+DE RLL+ ++ L EE +RNS+ ++ F
Sbjct: 643 EAVVKINFVDEKRLLEALEPYNSKLNAEERQRNSLGTNIEF 683
>gi|429857774|gb|ELA32622.1| exonuclease kem1 [Colletotrichum gloeosporioides Nara gc5]
Length = 1398
Score = 370 bits (951), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 232/630 (36%), Positives = 322/630 (51%), Gaps = 70/630 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA E+ R + EG ++P + FDSN ITPGTEFMA L
Sbjct: 95 MNQQRARRFRTALDA-------EKARDKAISEGVEMPKEPP---FDSNCITPGTEFMAKL 144
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+++ +++ D W+ +++LS VPGEGEHKIM Y+R + P YDPN RHCLY
Sbjct: 145 TQQLKYFVNKKVSEDADWQGCEIVLSGHEVPGEGEHKIMEYIRNAKAQPEYDPNVRHCLY 204
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+ + K KA E +
Sbjct: 205 GLDADLIMLGLLSHDPHFCLLREEV-TFGRHN-------------------KNKARELEH 244
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGND 236
+ + +H+ +REYL+ EF+ P F DLE ++DDFI M FFVGND
Sbjct: 245 QN---------FYLMHLCIVREYLELEFQELQEPGKLGFPFDLERVIDDFILMAFFVGND 295
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP++P L I EGA+ + +YK GY+ +G +L R++ ++ +G E F+
Sbjct: 296 FLPNLPRLHINEGALAAMFRIYKDILPKGDGYINEGGIINLPRLQKLLEELGKDEIESFE 355
Query: 297 KRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSEC 356
A E+ + K A ++ LV S R PY
Sbjct: 356 NDAS-----NEKWFQSKRSAEPNGVDNKKSKAKGLVLTS---SQRDLWKQKIRPYVNKPS 407
Query: 357 VGRLDNGKGTSGRPHK-VPRLSSGATIGAAIVEAEN-------SFETDPQEN----KEEF 404
LD G + K V L+ I + E ++ SF E+ +EE
Sbjct: 408 SEPLDLGTSLNAADRKFVQDLADTLHIEWSTKEDDDGHRHLLLSFPEGAVESLNDEEEEG 467
Query: 405 KAKLKELLRDKSDAFNSDNPEEDKVK-------LGEPGWKERYYEEKFNAKTPEEREETR 457
L ++R+ A D ED + WK +YY EKF E ++
Sbjct: 468 TLALYRVVRNYDKALVVDITPEDAQRHYQELYDTKYQAWKTKYYLEKFPEWPQESYDKEL 527
Query: 458 KDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFN 517
+ Y +GL WV+HYYY G+ SW WFY YHY+P SD+ ++ F LG PF+P+
Sbjct: 528 VKLCENYVQGLQWVLHYYYHGIASWPWFYQYHYSPLTSDVVKGLGADLKFTLGQPFRPYE 587
Query: 518 QLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEA 577
QL+GV P S +PE Y LMT+PNSPI DFYP DFE+DMNGK+ W+ I K+PFIDE
Sbjct: 588 QLMGVLPDRSKSIVPEVYWDLMTNPNSPIYDFYPRDFELDMNGKKMEWEAIVKIPFIDEK 647
Query: 578 RLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
RLL + L+++E RN + F
Sbjct: 648 RLLSAMATKNDQLSQQEKSRNGFGVALKFT 677
>gi|169606446|ref|XP_001796643.1| hypothetical protein SNOG_06264 [Phaeosphaeria nodorum SN15]
gi|160706992|gb|EAT86095.2| hypothetical protein SNOG_06264 [Phaeosphaeria nodorum SN15]
Length = 1021
Score = 370 bits (951), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 238/611 (38%), Positives = 330/611 (54%), Gaps = 49/611 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDS------QVFDSNVITPGT 54
MNQQRSRRFRA+++A + E + + +S + +DSN ITPGT
Sbjct: 111 MNQQRSRRFRAAREAKEKDEERAEFLKMLNSQKASRGEDINSLEEVVEKTWDSNAITPGT 170
Query: 55 EFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPN 114
FM +L+ +LQY+ + DP W+ +KVI+SDA+VPGEGEHKIM++VR QR +P +DPN
Sbjct: 171 PFMHLLAESLQYWCAYKFTTDPSWKDMKVIISDASVPGEGEHKIMNFVRSQRAIPTHDPN 230
Query: 115 TRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCE----G 169
TRH +YGLDADLIML+LATHE HF +LRE VF +DK C CG+ GH+ NCE G
Sbjct: 231 TRHVIYGLDADLIMLSLATHEPHFRVLREDVFFDSGKDKACTRCGRKGHIRNNCEFPDDG 290
Query: 170 KAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFM 229
K K E E+ P KPY +LH LREYL E P F+ DLE +DD++FM
Sbjct: 291 K-KLTEEEAAEEWAASEHPPKPYIWLHTNILREYLAVEMETPKRRFKYDLERSLDDWVFM 349
Query: 230 CFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGS 289
CFFVGNDFLPH+P+LEIR+ I+LL+++++ + Y+T P +RRV+ + A+ S
Sbjct: 350 CFFVGNDFLPHLPSLEIRDQGIDLLISIWRDLAAEMDDYVTKDGFPDMRRVQQILGALAS 409
Query: 290 YEDRIFQKRARLHQRHAERIKREKAQAR-----RGDDVEPLAQPDSLVPVSRFHGSRLAS 344
E IF+KR + R A R +AQ RGDD P V S + L S
Sbjct: 410 READIFKKRKEVSDRQAANRARREAQQNGRGRGRGDDTYSSGPPQKRVKEST--DTYLNS 467
Query: 345 GP---SPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENK 401
G P Q ++ R D+ S P + + G + D E+
Sbjct: 468 GTIFFDPKDAQSNDT--RRDHAAMRSPMPEAEGTQETDSATGVEAPVELGKRKADELEDA 525
Query: 402 EEFKAKLKELLRDKSDAFNS----DNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETR 457
+ + S A + D ED +KL E G++ERYYE+KF+ P++ R
Sbjct: 526 DNGTPGRNTPVVPASPAAETPKKEDGTPEDTIKLWEDGYEERYYEQKFHV-APDDI-AFR 583
Query: 458 KDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASD---LKDLDQFNISFELGHPFK 514
V +Y EGLCWV+ YY +G SW W++P+HYAPFA+D L+D+D + FE G PF
Sbjct: 584 NKVARQYAEGLCWVLAYYMQGCPSWTWYFPHHYAPFAADFVGLEDMDPRKL-FEKGTPFH 642
Query: 515 PFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFI 574
P+ QL+ V P S L + ++ YP E+ + ++ + G L F
Sbjct: 643 PYEQLM-VLPFIDSKRLLD-----------AMATKYP---ELSDDERKRNEFGKETLMFS 687
Query: 575 DEARLLDEVKK 585
E L D+V+K
Sbjct: 688 QEGGLFDDVEK 698
>gi|260949235|ref|XP_002618914.1| hypothetical protein CLUG_00073 [Clavispora lusitaniae ATCC 42720]
gi|238846486|gb|EEQ35950.1| hypothetical protein CLUG_00073 [Clavispora lusitaniae ATCC 42720]
Length = 1430
Score = 370 bits (950), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 238/646 (36%), Positives = 344/646 (53%), Gaps = 88/646 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR + +A EE LR+ + ++ PK D FDSN ITPGTEFMA L
Sbjct: 58 MNQQRSRRFRTAYEA------EENLRKAISQ--GEVIPKEDP--FDSNAITPGTEFMAKL 107
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+IH ++ D W IKVILS VPGEGEHKIM ++R ++ Y+PN RHC+Y
Sbjct: 108 TNNLKYFIHKKITEDNRWANIKVILSGHEVPGEGEHKIMQFIRSMKSQDDYNPNLRHCIY 167
Query: 121 GLDADLIMLALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADLIML L TH+ HFS+LR EVVF P ++ K+G+
Sbjct: 168 GLDADLIMLGLVTHDPHFSLLREEVVFGPS---------------------SRNKSGDIH 206
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIP--NPPFEIDLECIVDDFIFMCFFVGNDF 237
E+ + LH+ LREY+ EF+ PFE E ++DDFI + + +GNDF
Sbjct: 207 EQN---------FYLLHLSLLREYMGLEFQDLEGELPFEYSFERVLDDFILIMYVIGNDF 257
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
LP++P L I +GA L+ +K+ + + GYL +G K + +R +++ + +E F+K
Sbjct: 258 LPNLPDLHINKGAFPFLIGAFKESLKHMDGYLNEGGKINFKRFGTWLEYLSEFELENFEK 317
Query: 298 R---ARLHQRHAE--RIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQ 352
+ A + E I EK + R G + L D VS L +G P Q
Sbjct: 318 QNVDAEWFNKRLELISISGEKKRERSG---KLLMLKDEKKLVSILKPWLLETGVLPIS-Q 373
Query: 353 QSECVGRLDNGKGTSGRPHKVPRL------SSGATIGAAIVEA------ENSFETD---P 397
++ + + T P + + + G IV + E + + D P
Sbjct: 374 LTDLANK--DALPTCSLPSDLAKAHMEFLKTFALETGILIVHSRSNDTYEATIDVDGISP 431
Query: 398 QENKEEFKAKLKELLRDKSDAFNSDN--PEEDKVKLGEPGWKER-------YYEEKFNAK 448
E ++EF ++ LR + S N E+ +K + + E+ YY++K +
Sbjct: 432 YETEDEFNERVVN-LRKTIKNYQSSNLVATEETMKEAKDLYDEKFVRAKDEYYKKKLHFS 490
Query: 449 TPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASD----LKDL---D 501
+ EE + Y EGL WV++YYY+G SW W++ YHYAP SD +KD+ +
Sbjct: 491 IHD--EEKMIEFTRHYLEGLQWVLYYYYKGCASWNWYFRYHYAPRISDVAMGVKDMLEKN 548
Query: 502 QFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGK 561
Q I F+L PFKPF QL+ V P+ S +P+ YR LMTD +SPI DFYP + E+D+NGK
Sbjct: 549 QDEIHFDLATPFKPFEQLMAVLPARSRKLMPDVYRSLMTDEHSPIIDFYPHEVEIDLNGK 608
Query: 562 RYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
SW+ + L F+DE RLL+ +K IE LT E +RNS D++F+
Sbjct: 609 TASWEAVVLLSFVDEKRLLEALKPIEAKLTPAETKRNSYGQDVIFI 654
>gi|327301545|ref|XP_003235465.1| exonuclease [Trichophyton rubrum CBS 118892]
gi|326462817|gb|EGD88270.1| exonuclease [Trichophyton rubrum CBS 118892]
Length = 1424
Score = 370 bits (949), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 233/634 (36%), Positives = 337/634 (53%), Gaps = 75/634 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA E +++ +EG ++P K D+ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRARRFRTALDA-------ELAKEKAIKEGVEMP-KEDA--FDSNCITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+I+ +++ D W+ ++V+LS VPGEGEHKIM Y+R + P YDPN RHCLY
Sbjct: 144 TKQLKYFINKKVSEDAEWQGVEVVLSGHEVPGEGEHKIMEYIRQAKAQPEYDPNMRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+Q +++K+ E +
Sbjct: 204 GLDADLIMLGLLSHDPHFCLLREEV-TFGRQ-------------------SQKKSKELEH 243
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGND 236
+ + LH+ +REYL+ EF+ F D+E I+DDFI M FFVGND
Sbjct: 244 QN---------FYLLHLCIVREYLELEFQELKLDGALQFPFDMERIIDDFILMAFFVGND 294
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP++P L I EGA+ + VYK LGGY+ + ++ R+ + A+ E R F+
Sbjct: 295 FLPNLPNLHINEGALAWMFKVYKDVLPKLGGYVNEHGTINMERLRTLLAALSDVEFRFFE 354
Query: 297 KRARLHQRHAERIKREKAQARRGDDVEPL-AQPD--SLVPVSRFHGSRLASGPSPSPYQQ 353
+ K++ GD L +P+ ++ P + +R+ + P +
Sbjct: 355 A-------EYSDARWLKSKTLDGDQTPTLPEKPNVFTITPAQKHIFNRIKKYVTHRPMDE 407
Query: 354 SECVGRLDNGKGTSGRPHK-VPRLSSGATIGAAIVEAE------------NSFETDPQEN 400
+ LD R K V +L+ + + V + N+ + D ++
Sbjct: 408 AGQPVPLDLSPSLPARDRKFVEQLADSLHLKWSSVLNQHEERFLRVQLPTNNDDDDEDDD 467
Query: 401 KEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKE-------RYYEEKFNAKTPEER 453
+E + + +L+ +A + ED E +++ +YY+ KF E
Sbjct: 468 DDESQIAILRVLKKYENAKVKEVTAEDAQMAAEKKYEKKFQDWKDKYYKGKFGWGL-ENT 526
Query: 454 EETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPF 513
EE RK + Y +GL WV+ YYY GV SW WFY YHYAP SD+ ++ F+LG PF
Sbjct: 527 EEMRK-LTENYVQGLQWVLFYYYRGVASWPWFYRYHYAPMISDIHLGLGADVDFKLGQPF 585
Query: 514 KPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPF 573
PF QL+GV P S +P + LMT P+SPI DFYP DFE+DMNGK+ W+ + K+PF
Sbjct: 586 FPFQQLMGVLPDRSKKIVPVAFHGLMTTPDSPIIDFYPRDFELDMNGKKMEWEAVVKIPF 645
Query: 574 IDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
IDE RLL + EH LT EE RN+ + F
Sbjct: 646 IDEERLLKAMATKEHLLTPEEKARNTFGVTLKFT 679
>gi|345569898|gb|EGX52724.1| hypothetical protein AOL_s00007g507 [Arthrobotrys oligospora ATCC
24927]
Length = 1409
Score = 370 bits (949), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 230/639 (35%), Positives = 342/639 (53%), Gaps = 89/639 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR +A + E+ Q+ ++G ++P K D FDSN ITPGT FMA L
Sbjct: 94 MNQQRARRFR-------TALDNEKAYQKAVKDGVEMP-KEDP--FDSNCITPGTGFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S L+Y+I+ ++++D W+ +++ILS VPGEGEHKIM Y+RL + PGY+PN RHCLY
Sbjct: 144 SEQLKYFINKKVSDDAEWQGLEIILSGHEVPGEGEHKIMEYIRLTKAQPGYNPNLRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+ ++ +K+ E +
Sbjct: 204 GLDADLIMLGLLSHDPHFCLLREEV-TFGRNNQ-------------------KKSKELEH 243
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEI----DLECIVDDFIFMCFFVGND 236
+ + +H+ +REYL+ EF+ P + D E ++DDF+ + FFVGND
Sbjct: 244 QN---------FYLMHLSIVREYLELEFQELKEPGLLSVPYDFERVLDDFVLLAFFVGND 294
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLPH+P L I EGA++L+ +YKK GY+ D + +L + + + +E ++F+
Sbjct: 295 FLPHLPGLHINEGALSLMFKIYKKVLTKAKGYINDHGQVNLETLGLVLDEMEEFEYKVFE 354
Query: 297 KRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQ---- 352
E + ++ D+E A+P HG + + Y+
Sbjct: 355 ---------TETADASWLRGKQMKDLEAAAKPKK-------HGKVVMTTNQKGLYKLVRE 398
Query: 353 --QSECVGRLD---NGKGTSGRPHK-VPRLSSGATIGAAIVEAEN-----------SFET 395
++ G +D + KG + K V L+ + + EN S +
Sbjct: 399 FIENRKKGEIDKYLDIKGLNAADRKFVEDLAQSLRLQYITITDENVEKFARLSFYPSLDG 458
Query: 396 DPQENKEEFKAKLKELLRDKSDA----FNSDNPEEDKVKLGEP---GWKERYYEEKFNAK 448
D + EE +A L + + A ++D + + +L + W++ YY+ KF
Sbjct: 459 DEEFEDEEGRAALDRVFKAFEKASIVDISADEAKAEMERLYQEKFRAWRDGYYKAKFGFG 518
Query: 449 TPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFE 508
++ EE R + Y EG+ WV+ YYY GV SW WF+ YHYAP SD+K N++F
Sbjct: 519 L-DDTEEMR-GLAENYIEGIQWVLFYYYRGVASWGWFFRYHYAPKISDVKKGLGANLNFR 576
Query: 509 LGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGI 568
LG PF+PF QL+GV P S +PE Y LMT P+SPI DFYP DFE+DMNGK+ W+ +
Sbjct: 577 LGSPFRPFEQLMGVLPDRSKKIVPEPYHVLMTSPDSPILDFYPRDFELDMNGKKQDWEAV 636
Query: 569 AKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
K+PFI E RLL ++ EH LT++E RN + F
Sbjct: 637 VKIPFIQEDRLLAAMRTREHLLTKDEISRNGFGITLKFT 675
>gi|324500092|gb|ADY40054.1| 5'-3' exoribonuclease 1 [Ascaris suum]
Length = 1700
Score = 369 bits (948), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 233/622 (37%), Positives = 323/622 (51%), Gaps = 70/622 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRF ++K+A + E QE +E R FD N ITPGTEFMA L
Sbjct: 94 MNQQRARRFMSAKNAELALKIAESKGQEIPKEKR----------FDPNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
LQY+I ++++ D W+ I+V LS N PGEGEHKIM ++R +R+ P YD NTRHCLY
Sbjct: 144 HEQLQYFIKMKISTDTAWQGIRVYLSGHNCPGEGEHKIMDFIRSERSQPDYDANTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+P + K+ K G
Sbjct: 204 GLDADLIMLGLCSHEPHFSLLREEV----------KFGRP----PKHKHKSTPKTG---- 245
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFL 238
V + LH+ LREYL +EFR F D+E ++DD++ M F VGNDF+
Sbjct: 246 ------VDGITFHLLHLSLLREYLSWEFRPIQDKLSFPYDMESVIDDWVLMGFLVGNDFI 299
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 298
PH+P + I E A+ L + Y + L GYL + +L+R E F++A + + F +R
Sbjct: 300 PHLPHVHIHEDALPALYSTYVQVLPQLDGYLNEAGILNLKRFEKFLKAFSKIDRQSFMQR 359
Query: 299 --------ARLHQRHAERIKREKAQAR--RGDDVEPLAQPDSLVPVSRFHGSRLASGPSP 348
++ Q ++R +EKA+ DD E QP + S +G
Sbjct: 360 MEDEDYLASKRTQPSSKREPKEKAKVIGPHDDDEEEELQP--------YSDSESENGDEE 411
Query: 349 SPYQQSECVGRLDNGKGTSGRPHKVPR---LSSGATIGAAIVEAENSFETDPQENKEEFK 405
S +++ G D+ P P S+ + I E+ E P
Sbjct: 412 SS-EENVHRGAFDSDSENEDLPEVEPTPEVPSAWELLKDGIPPLEDESEERP-------- 462
Query: 406 AKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYT 465
L ++ +++ + D V K YY +K N K +EE R+ Y
Sbjct: 463 --LVGIIDEENYENDCDVVWTHSVNRAFKDHKRNYYNDKMNYKNI-SKEELREQAE-GYI 518
Query: 466 EGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPS 525
+ W +HYYY G CSW WFYP+HYAP+ SD+ D I+FEL PF PF QL+ V P+
Sbjct: 519 RAIQWNLHYYYHGCCSWNWFYPHHYAPYISDVTDFADMEINFELSAPFHPFEQLMAVLPA 578
Query: 526 ASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKK 585
AS+ LP ++LM D +SPI +FYP DFE D+NGK+ W+ + +PFI+E RLLD +
Sbjct: 579 ASADCLPVPLQELMFDESSPILEFYPRDFETDLNGKKNDWEAVVLIPFINEKRLLDAIAS 638
Query: 586 IEHTLTEEEARRNSIMADMLFV 607
E LT+EE RRNS +LF
Sbjct: 639 KEARLTDEERRRNSHGPHLLFT 660
>gi|310794358|gb|EFQ29819.1| XRN 5'-3' exonuclease [Glomerella graminicola M1.001]
Length = 1407
Score = 369 bits (947), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 229/632 (36%), Positives = 325/632 (51%), Gaps = 75/632 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + D E+ R + EG ++P + FDSN ITPGTEFMA L
Sbjct: 95 MNQQRARRFRTALDT-------EKARDKAISEGVEMPKEPP---FDSNCITPGTEFMAKL 144
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+++ +++ D W+ +++LS VPGEGEHKIM Y+R + P YD N RHCLY
Sbjct: 145 TQQLKYFVNKKVSEDADWQGCEIVLSGHEVPGEGEHKIMEYIRNAKAQPDYDSNVRHCLY 204
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+ K K E +
Sbjct: 205 GLDADLIMLGLLSHDPHFCLLREEV-TFGRVSKA-------------------KTRELEH 244
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGND 236
+ + LH+ +REYL+ EF+ P F DLE ++DDFI M FFVGND
Sbjct: 245 QN---------FYLLHLCIVREYLELEFQELKEPGRLSFPFDLERVIDDFILMAFFVGND 295
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP++P L I EGA+ + +YK GY+ +G +L R++ + + E F+
Sbjct: 296 FLPNLPRLHINEGALAAMFRIYKSVLPLGDGYINEGGVINLPRLQRLLNELAKDETNQFE 355
Query: 297 KRARLHQRHAERIKREK--AQARRGDDVEPLAQPDSLVPVSR-FHGSRLASGPSPSPYQQ 353
H E+ + K ++ D+ +P + L R R+ PY +
Sbjct: 356 -----HDVSDEKWFQSKKLLESNGADNKKPKGKGLVLTSSQRDLWKQRI------RPYVK 404
Query: 354 SECVGRLDNGKGTSGRPHK-VPRLSSGATIGAAIVEAEN-------SF---ETDPQENKE 402
LD G + K V L+ I + E + SF + + +E
Sbjct: 405 KPSSEPLDLGTSLNAADRKFVQDLADTLHIEWSTKEDDEGHRHLLLSFPKGAENVNDEEE 464
Query: 403 EFKAKLKELLRDKSDAFNSDNPEEDKVKLGEP-------GWKERYYEEKFNAKTPEEREE 455
E L ++R+ A D ED + + GWK +YY +KF PE+ E
Sbjct: 465 EGTLALYRVMRNYDKATVVDVGGEDAQRQYKELYDQKYQGWKTKYYLQKFPEWAPEQYET 524
Query: 456 TRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKP 515
+ Y +GL WV++YYY G+ SW WFY YHY+P SD+ +++F+LG PF+P
Sbjct: 525 ELTKLCENYVQGLQWVLYYYYRGIASWPWFYQYHYSPLTSDVTRGLGADLNFKLGQPFRP 584
Query: 516 FNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFID 575
F QL+GV P S +PE Y LMT+PNSPI DFYP DFE+DMNGK+ W+ + K+PFID
Sbjct: 585 FEQLMGVLPDRSKSIVPEVYWDLMTNPNSPIYDFYPRDFELDMNGKKMEWEAVVKIPFID 644
Query: 576 EARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
E RLL ++ L+E + RN + F
Sbjct: 645 EKRLLSAMEPKNKLLSEGQKERNGFGVALKFT 676
>gi|119498925|ref|XP_001266220.1| exonuclease Kem1, putative [Neosartorya fischeri NRRL 181]
gi|119414384|gb|EAW24323.1| exonuclease Kem1, putative [Neosartorya fischeri NRRL 181]
Length = 1414
Score = 369 bits (946), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 238/647 (36%), Positives = 335/647 (51%), Gaps = 102/647 (15%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA A+E+ + Q E PK D FDSN ITPGTEFMA L
Sbjct: 94 MNQQRARRFRTALDA--EVAKEKAIAQGIEM------PKEDP--FDSNCITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+I+ +++ D W+ + ++LS VPGEGEHKIM Y+R + PGYDPN RHCLY
Sbjct: 144 TQQLKYFINKKISEDKDWQGVDIVLSGHEVPGEGEHKIMEYIRHAKAQPGYDPNIRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+Q ++K E +
Sbjct: 204 GLDADLIMLGLLSHDPHFCLLREEV-TFGRQ-------------------VQKKPKELEH 243
Query: 181 KGDEVVVPKKPYQFLHIWTLRE-------------YLDYEFRIPNPPFEIDLECIVDDFI 227
+ + LH+ +RE LD+ F D+E ++DDFI
Sbjct: 244 QN---------FYLLHLCMVREYLELEFQELEQEGVLDFPF---------DMERVIDDFI 285
Query: 228 FMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAV 287
M FFVGNDFLP++P L I EGA++L+ +YK +GGY+ +G +L+R+ I+A+
Sbjct: 286 LMAFFVGNDFLPNLPNLHINEGALSLMFKIYKDVLPKMGGYVNEGGVINLKRLGMLIEAL 345
Query: 288 GSYEDRIFQ-----KRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSR- 341
E R F+ R +R+ E + +G + P AQ + + ++ +R
Sbjct: 346 SDVEFRFFEAEYSDARWINAKRNGVENGSEFQEKPKGLTLTP-AQKELFKEIKKYVLNRP 404
Query: 342 -LASGPSPSPYQQSECVGRLDNGKGTSGRPHK-VPRLSSGATIGAAIVEAE--------- 390
ASG P LD R K V +L+ + V E
Sbjct: 405 EKASGSKP-----------LDLSPTLPARDRKFVEQLADDLRLPWTTVADEHGDRFIRLQ 453
Query: 391 ---NSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGW-------KERY 440
N + +E EE ++ ++R +A + E+ K E + K++Y
Sbjct: 454 LPANEDDDSEEEEDEEASMAVQRVIRRYDNAKVQEISPEEAQKAAEKKYEEKFQDWKDKY 513
Query: 441 YEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDL 500
Y KF + EE RK + Y +GL WV++YYY G+ SW WF+ YHYAP SD+
Sbjct: 514 YMSKFGWGL-DNHEEMRK-LTENYVQGLQWVLYYYYRGIASWPWFFKYHYAPMISDVIKG 571
Query: 501 DQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNG 560
+++F+LG PFKP+ QL+GV P S +P +R LMT P SPI DFYP DFE+DMNG
Sbjct: 572 LNADMNFKLGQPFKPYEQLMGVLPDRSKQIVPAAFRDLMTSPESPIIDFYPRDFELDMNG 631
Query: 561 KRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
K+ W+ + K+PFIDE RLL+ + EH LT EE RN + F
Sbjct: 632 KKMEWEAVVKIPFIDERRLLEALATREHLLTPEEKARNGFGVSLKFT 678
>gi|255728793|ref|XP_002549322.1| 5'-3' exoribonuclease 1 [Candida tropicalis MYA-3404]
gi|240133638|gb|EER33194.1| 5'-3' exoribonuclease 1 [Candida tropicalis MYA-3404]
Length = 1513
Score = 368 bits (945), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 239/647 (36%), Positives = 350/647 (54%), Gaps = 89/647 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + +A EE L++ ++ PK D FDSN ITPGTEFM+ L
Sbjct: 93 MNQQRARRFRTAYEA------EENLKKAIA--NGEVIPKEDP--FDSNSITPGTEFMSKL 142
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
++ L+Y+IH ++ D W I +ILS VPGEGEHKIM Y+R R+ P Y+PN RHC+Y
Sbjct: 143 TVNLKYFIHKKITEDSNWANIDIILSGHEVPGEGEHKIMEYIRAIRSQPEYNPNLRHCIY 202
Query: 121 GLDADLIMLALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADLIML+L TH+ HF++LR EV F P +K+ G+ D
Sbjct: 203 GLDADLIMLSLVTHDPHFALLREEVTFGP----------------------SKKSLGDKD 240
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFR-IPNP-PFEIDLECIVDDFIFMCFFVGNDF 237
+ + + LHI LREYL EF+ + N FE + E I+DDFI + + +GNDF
Sbjct: 241 -------LSDQKFFLLHISLLREYLSLEFQDLENQLTFEYNFERILDDFILIMYVIGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
LP++P L I +GA LL+AV K+ GY+ + K +L+R+ + + + ++E F+K
Sbjct: 294 LPNLPDLFINKGAFPLLIAVIKQALLDSDGYINENGKINLKRLNIYFKKLSNFEFENFEK 353
Query: 298 RARLHQRHAER-----IKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQ 352
+ + ++ I EK + + G + L LV + AS P
Sbjct: 354 KEVDVEWFNKKLNDVSISGEKKRQQLGKLI-ILKDQKKLVGSIKPWLMEWASQP------ 406
Query: 353 QSECVGRLDN-GKGTSGRPHK---------VPRLSSGATIGAAIVEAENSFETD------ 396
E + L+N GK + + +K + + A ++ +++E
Sbjct: 407 -IETLLSLENEGKLPTLKLNKDDVENNLDFIKEFALQAGFLIIHSKSNDTYEAKIDVDGI 465
Query: 397 -PQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEP---------GWKERYYEEKFN 446
P E++EE ++ EL + + +++ E ++V L E WK+ YY+ K +
Sbjct: 466 IPTESEEERNDRINELRKTIKEYQSAELIESEEV-LNETKSVYSHKFEDWKDNYYKSKLH 524
Query: 447 AKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASD----LKDLDQ 502
E++EE K + Y EGL WV++YYY GV SW WFY YHYAP SD L+ L +
Sbjct: 525 FSIKEDKEELLK-LTTHYVEGLQWVLYYYYRGVPSWNWFYKYHYAPRISDISLGLEYLIE 583
Query: 503 FNI--SFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNG 560
NI +FE HPFKPF QL+ V P+ S +P YR LMTD SPI +FYP + ++DMNG
Sbjct: 584 NNIELTFEKSHPFKPFEQLMAVLPARSRKLMPLVYRPLMTDEKSPIINFYPHEVDIDMNG 643
Query: 561 KRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
K SW+ + L F+DE +L+D +K IE LT +E RNS + + F+
Sbjct: 644 KTASWEAVVLLDFVDEKKLIDVLKPIEEKLTPDETARNSYGSPIKFI 690
>gi|336262386|ref|XP_003345977.1| hypothetical protein SMAC_06532 [Sordaria macrospora k-hell]
gi|380089569|emb|CCC12451.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1428
Score = 368 bits (945), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 231/635 (36%), Positives = 338/635 (53%), Gaps = 80/635 (12%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR +A + E+ R + REG++LP + + FDSN ITPGTEFMA L
Sbjct: 94 MNQQRARRFR-------TALDNEKARDKAIREGKELPKE---EPFDSNCITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S L+Y+I+ +++ D W++ +++LS VPGEGEHKIM Y+R R P Y N RHCLY
Sbjct: 144 SQQLRYFINKKVSEDKDWQQPEIVLSGHEVPGEGEHKIMEYIRNARAQPDYSANVRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+ G AK K +E
Sbjct: 204 GLDADLIMLGLLSHDPHFCLLREEV-TFGR------------------GPAKHKTKGLEE 244
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGND 236
+ + +H+ +REYL+ EF+ P F D+E ++DDFI M FFVGND
Sbjct: 245 QN---------FYLMHLCIVREYLELEFQDLKKPGAMSFPFDMEKVIDDFILMAFFVGND 295
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP++P L I EGA++L+ +YK+ GY+ +G K +L+R+ ++ +G E R F+
Sbjct: 296 FLPNLPRLHINEGALSLMFRIYKEILPRGDGYINEGGKVNLQRLGLLLEELGKEEYRFFE 355
Query: 297 KRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQ--- 353
H+ + R K +D E A+ ++ G + + + ++Q
Sbjct: 356 -----HEHEDQGWLRAKKMLE--NDEEETAK-------AKIKGKLIVTTNQKNLWKQKIR 401
Query: 354 ----SECVGRLDNGKGTSGRPHKVPR-LSSGATIGAAIVEAENS---------FETDPQE 399
+ LD G K + L+ A I A E + D E
Sbjct: 402 KFLTNRSTNTLDLGTELKAEDRKFAQDLADTAHIPWATKEDDEGHRHLILQFPERDDESE 461
Query: 400 NKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERY-------YEEKFNAKTPEE 452
EE ++ + +++ +A D D E +++++ Y EKF TPE
Sbjct: 462 EDEEAQSAVLRIIKKYDNAQVVDLTAADSKAAMEAKYQQKFQEWKDKYYAEKFEEWTPEN 521
Query: 453 REETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHP 512
+EE + + Y +GL WV++YYY G+ SW WFY YHYAP SD+ + +++F++G P
Sbjct: 522 KEEELRHLTENYVQGLQWVLYYYYRGIASWPWFYRYHYAPMISDVVKGLKADLNFKMGQP 581
Query: 513 FKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLP 572
FKP+ QL+GV P S +P Y LMT+P+SPI DFYP DFE+DMNGK+ W+ + K+P
Sbjct: 582 FKPYEQLMGVLPDRSKKIVPTVYWDLMTNPDSPIIDFYPRDFELDMNGKKMDWEAVVKIP 641
Query: 573 FIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
FIDE RLL + L++ E RN + F
Sbjct: 642 FIDEKRLLAAMGPKNELLSDVEKSRNDFGVALKFT 676
>gi|448107259|ref|XP_004205309.1| Piso0_003552 [Millerozyma farinosa CBS 7064]
gi|448110212|ref|XP_004201573.1| Piso0_003552 [Millerozyma farinosa CBS 7064]
gi|359382364|emb|CCE81201.1| Piso0_003552 [Millerozyma farinosa CBS 7064]
gi|359383129|emb|CCE80436.1| Piso0_003552 [Millerozyma farinosa CBS 7064]
Length = 1508
Score = 368 bits (944), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 231/654 (35%), Positives = 347/654 (53%), Gaps = 103/654 (15%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + +A E L++ + +G ++P K D FDSN ITPGTEFMA L
Sbjct: 93 MNQQRARRFRTAYEA------ELNLKKAIQ-DGAEIP-KEDP--FDSNAITPGTEFMAKL 142
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+IH ++ D W +++ILS VPGEGEHKIM Y+R +N P +PN RHC+Y
Sbjct: 143 TDNLKYFIHKKITEDSRWANVQIILSGHEVPGEGEHKIMEYIRTMKNQPDAEPNLRHCIY 202
Query: 121 GLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADLIML L +H HF++LRE V F P ++++K+ + +
Sbjct: 203 GLDADLIMLGLVSHYPHFALLREEVTFGP---------------------RSQKKSSDIN 241
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPP--FEIDLECIVDDFIFMCFFVGNDF 237
++ + LH+ LREYL EFR + FE + E ++DDFI + + +GNDF
Sbjct: 242 DQK---------FYLLHLSLLREYLSLEFRDLDTELNFEYNFERVLDDFILIMYVIGNDF 292
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
LP++P L + +GA L++ +K+ R GYL + +L+R++ ++ + +E F+K
Sbjct: 293 LPNLPDLHLNKGAFPLILETFKQALRQCDGYLNENGTINLKRLDIWLHILSEFELENFEK 352
Query: 298 RARLHQRHAER-----IKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQ 352
+ + +R I EK + R G + L LV + + P+
Sbjct: 353 QDIDVEWFNKRLEDISITGEKRRERMG-KLLILKDQKKLVGMIK-------------PWL 398
Query: 353 QSECVGRLDNGKGTSGRPH----KVPRLSS----------GATIGAAIV--EAENSFE-- 394
C ++ + + ++PR S +G IV +++++E
Sbjct: 399 LEICNTKISDLIKLANEDKLPTLELPREESEKHIEFLKMFALDVGILIVHSRSKDTYEVR 458
Query: 395 -----TDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEP---------GWKERY 440
T P E+ EE + +L +R + S N E + L E WK++Y
Sbjct: 459 LDVDGTPPDESDEEHEERLAN-IRKIIKRYQSANLVETEDLLKESKDVYDSKFMNWKDQY 517
Query: 441 YEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDL-KD 499
Y+EK + + +E D+ Y EGL WV++YYY+G SW WFY YHYAP SD+
Sbjct: 518 YKEKVHFSIND--KENLVDMTQNYVEGLQWVLYYYYKGCPSWNWFYRYHYAPRISDIHVG 575
Query: 500 LDQF-----NISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDF 554
++++ I FE PFKPF QL+ V P+ S +P YR+LMTDP SP+ DFYP +
Sbjct: 576 VEEYVKTNHKIKFEKSTPFKPFEQLMAVLPARSRKLMPIVYRQLMTDPASPLIDFYPAEV 635
Query: 555 EVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVL 608
++DMNGK+ SW+ + L F+DE RLLD +K E LT EE RRNS D+ F+
Sbjct: 636 DIDMNGKKASWEAVVLLSFVDEKRLLDALKPFEQKLTIEEKRRNSFGTDLRFIF 689
>gi|145242532|ref|XP_001393839.1| exonuclease Kem1 [Aspergillus niger CBS 513.88]
gi|134078390|emb|CAK40380.1| unnamed protein product [Aspergillus niger]
Length = 1406
Score = 367 bits (943), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 229/630 (36%), Positives = 337/630 (53%), Gaps = 72/630 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA A+E+ + Q E PK ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRARRFRTALDA--ETAKEKAIAQGIEM------PKEEA--FDSNCITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+I+ +++ D W+ ++++LS VPGEGEHKIM Y+R + P YDPN RHCLY
Sbjct: 144 TEQLKYFINKKISEDKDWQGVEIVLSGHEVPGEGEHKIMEYIRHAKAQPLYDPNVRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HFS+LRE V T G+Q ++K+ E +
Sbjct: 204 GLDADLIMLGLLSHDPHFSLLREEV-TFGRQ-------------------VQKKSKELEH 243
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNP----PFEIDLECIVDDFIFMCFFVGND 236
+ + LH+ +REYL+ EF+ F D+E ++DDFI M FFVGND
Sbjct: 244 QN---------FYLLHLCMVREYLELEFQELEQEGVLSFPFDMEKVIDDFILMAFFVGND 294
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP++P L I EGA+ + +YK+ +GGY+ + + R+ + A+ E R F+
Sbjct: 295 FLPNLPNLHINEGALAFMFKIYKESLPKMGGYINEQGVIKMDRLGILLDALSDVEFRFFE 354
Query: 297 KRARLHQRHAERIKREKAQARRGDDVEPLAQPD--SLVPVSRFHGSRLASGPSPSPYQQS 354
E + +A++G+ EP ++P ++ P + ++ P + +
Sbjct: 355 H---------EYSDAQWIRAKKGEVTEPQSKPKGLTITPAQKELFKQVKKYVLNRPEKAA 405
Query: 355 ECVGRLDNGKGTSGRPHK-VPRLSSGATIGAAIVEAENS-----------FETDPQENKE 402
E LD R K V +L+ + V E+ D + E
Sbjct: 406 ET-KPLDFASSLPARDRKFVEQLADDLRLPWTTVADEHGDRFIRVQLPGNDNEDSDDEDE 464
Query: 403 EFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPE-----EREETR 457
E ++ ++R +A + E+ + E ++E++ E K N + + E
Sbjct: 465 EASVAVQRIIRRYDNAKVQELSAEEAQQAAEKKYEEKFQEWKNNYYVGKFGWGLDSHEEM 524
Query: 458 KDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFN 517
K++ Y +GL WV++YYY G+ SW WF+ YHYAP SD+K + +F LG PF+P+
Sbjct: 525 KELTENYVQGLQWVLYYYYRGIASWPWFFKYHYAPMISDVKKGLNADTNFRLGKPFRPYE 584
Query: 518 QLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEA 577
QL+GV P S +P YR LMT P+SPI DFYP DFE+DMNGK+ W+ + K+PFI+E
Sbjct: 585 QLMGVLPDRSKKTVPAAYRDLMTSPDSPIIDFYPRDFELDMNGKKMEWEAVVKIPFIEER 644
Query: 578 RLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
RLLD + EH LT EE RN A + F
Sbjct: 645 RLLDALATREHLLTPEEKARNGFGASLKFT 674
>gi|67466694|ref|XP_649490.1| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
gi|56465942|gb|EAL44104.1| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
Length = 779
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 222/601 (36%), Positives = 341/601 (56%), Gaps = 82/601 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRF+ +++ + + EE++ + DSN ITPGTEFM +
Sbjct: 105 MNQQRSRRFKTAQNMVNQSFEEKK-------------SVFKEKPIDSNCITPGTEFMEAV 151
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S ++ YI R+N+ W I VI SD++VPGEGEHKI+ ++R Q++ Y+P RHC+Y
Sbjct: 152 SKVIKAYIKERMNSSKYWNSIIVIFSDSSVPGEGEHKIIDFIRRQKDCKNYNPYIRHCMY 211
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIMLALATHE +FSI+R+ + G DKC++CG+ H + +C K + D
Sbjct: 212 GLDADLIMLALATHERYFSIIRDKPYNKG--DKCYICGE-YHSSDSC--KNYNRVAPLDP 266
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
KP+ F+ LR+YL+ ++ + D E +DDFIF CF VGNDFLPH
Sbjct: 267 -------ITKPFIFVDCHVLRQYLNNTIKVE----KYDFERCLDDFIFFCFLVGNDFLPH 315
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+L+I+EGAI++L+ +Y K F GY+T+ + + V+ F+ VG E ++ R
Sbjct: 316 IPSLDIQEGAIDILIKIYLK-FLPENGYITENGTINFKIVKRFLHLVGKEEKQLLVNR-- 372
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRL 360
R+++EK D + + + D + QS
Sbjct: 373 -------RLRKEKEDQLYFD--KKMRELDYQI--------------------QS------ 397
Query: 361 DNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFN 420
R +P+ + + +I E E + E + Q +E + K +E++R +
Sbjct: 398 ----AFENRTEALPQRKTEIKV-KSIKEVELAKE-ESQLIRESLEKKKQEVVRQMEEL-- 449
Query: 421 SDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVC 480
+ D+++LGE G++ERYY++KF+ +E+ ++V Y EGL WV YYYEG
Sbjct: 450 ----KHDEIQLGEQGYEERYYQQKFHVDYKKEKNNII-EIVDSYVEGLNWVFSYYYEGCQ 504
Query: 481 SWQWFYPYHYAPFASDL-KDLD-QFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKL 538
SW W+YPY+YAPFA D+ K LD +F + + G PF+PF QL+ V P S H LP+ +++L
Sbjct: 505 SWDWYYPYYYAPFAKDIGKLLDPEFEVQYTQGKPFRPFEQLMSVLPPQSKHCLPKEFQQL 564
Query: 539 MTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
M +SP+S FYP DF++DMNG+R ++ IA + FI++ +LL+ V+ IE L +++ +RN
Sbjct: 565 MNSTSSPLSSFYPEDFKIDMNGERSFYKAIALIGFINQKKLLNVVEPIEKELGKKDQQRN 624
Query: 599 S 599
S
Sbjct: 625 S 625
>gi|322703736|gb|EFY95340.1| exonuclease Kem1 [Metarhizium anisopliae ARSEF 23]
Length = 1404
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 225/639 (35%), Positives = 330/639 (51%), Gaps = 80/639 (12%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA E+ R++ +EG ++P + + FDSN ITPGTEFMA L
Sbjct: 80 MNQQRARRFRTALDA-------EKAREKAIKEGVEMPKE---EPFDSNCITPGTEFMAKL 129
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S L+Y+++ +++ D W+ +++LS VPGEGEHKIM Y+R + P Y+PN RHCLY
Sbjct: 130 SQQLRYFVNKKVSEDADWQGCEIVLSGHEVPGEGEHKIMEYIRNAKAQPNYNPNVRHCLY 189
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+ K K+ E +
Sbjct: 190 GLDADLIMLGLLSHDPHFCLLREEV-TFGRASKA-------------------KSKELEH 229
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIP----NPPFEIDLECIVDDFIFMCFFVGND 236
+ + LH+ +REYL+ EF+ F DLE ++DDFI M FFVGND
Sbjct: 230 QN---------FYLLHLCIVREYLEMEFQELHQEGTLSFSFDLERVIDDFILMAFFVGND 280
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP++P L I EGA+ + +YK GY+ + ++ R++ + + E F+
Sbjct: 281 FLPNLPGLHINEGALANMFKIYKAVLPTCDGYINENGVINMARLDKLLTELSKLELVSFE 340
Query: 297 KRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSEC 356
+ A + +K +A+ G + A+ L+ ++ F R P+
Sbjct: 341 HDISDEKWFASKQMEKKLEAKNGGSNKN-AKTGQLI-ITSFQ--RDLWKQKIRPFVSKRS 396
Query: 357 VGRLDNGKGTSGRPHKVPR-LSSGATIGAAIVEAEN-------SF-------------ET 395
LD G K + ++ + + E EN SF E
Sbjct: 397 ADALDLGITLKAADRKFAQDIADAMHLDWSTKENENGDRHLVLSFPARRGGGEDEDEDEE 456
Query: 396 DPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERY-------YEEKFNAK 448
+ + N F+ +++ A D E+ + E + E+Y Y +KF
Sbjct: 457 EEEGNLAAFR-----VIKSYDKALVVDVTSEEAQQQYEKLYNEKYAGWKTKYYLQKFPEW 511
Query: 449 TPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFE 508
PE+ E+ + D+ Y +GL WV+ YYY+G+ SW WFY YHYAP SD+ ++SF+
Sbjct: 512 APEKYEKEQIDLCQNYVQGLQWVLFYYYKGIASWPWFYGYHYAPLISDVAKGLNADLSFK 571
Query: 509 LGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGI 568
G PFKP+ QL+GV P S +P+ Y LMT+PNSPI DFYP DFE+DMNGK+ W+ +
Sbjct: 572 KGQPFKPYEQLMGVLPDRSKKIVPKVYHDLMTNPNSPIIDFYPRDFELDMNGKKMEWEAV 631
Query: 569 AKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
K+PFIDE RLLD + L ++E RN + F
Sbjct: 632 VKIPFIDEKRLLDAMAPKNDLLEDDEKSRNGFGVPIKFT 670
>gi|302506324|ref|XP_003015119.1| hypothetical protein ARB_06879 [Arthroderma benhamiae CBS 112371]
gi|291178690|gb|EFE34479.1| hypothetical protein ARB_06879 [Arthroderma benhamiae CBS 112371]
Length = 1302
Score = 366 bits (940), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 232/634 (36%), Positives = 336/634 (52%), Gaps = 75/634 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA E +++ +EG ++P K D+ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRARRFRTALDA-------ELAKEKAIKEGVEMP-KEDA--FDSNCITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+I+ +++ D W+ ++V+LS VPGEGEHKIM Y+R + P YDPN RHCLY
Sbjct: 144 TKQLKYFINKKVSEDAEWQGVEVVLSGHEVPGEGEHKIMEYIRQAKAQPEYDPNMRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+Q +++K+ E +
Sbjct: 204 GLDADLIMLGLLSHDPHFCLLREEV-TFGRQ-------------------SQKKSKELEH 243
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGND 236
+ + LH+ +REYL+ EF+ F D+E I+DDFI M FFVGND
Sbjct: 244 QN---------FYLLHLCIVREYLELEFQELKLDGALQFPFDMERIIDDFILMAFFVGND 294
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP++P L I EGA+ + VYK LGGY+ + ++ R+ + A+ E R F+
Sbjct: 295 FLPNLPNLHINEGALAWMFKVYKDVLPKLGGYVNEHGTINMERLRTLLTALSDVEFRFFE 354
Query: 297 KRARLHQRHAERIKREKAQARRGDDVEPL-AQPD--SLVPVSRFHGSRLASGPSPSPYQQ 353
+ K++ GD L +P+ ++ P + +R+ + P +
Sbjct: 355 A-------EYSDARWLKSKTLDGDQTPTLPEKPNVLTITPAQKHIFNRIKKYVTHRPMDE 407
Query: 354 SECVGRLDNGKGTSGRPHK-VPRLSSGATIGAAIVEAE------------NSFETDPQEN 400
+ LD R K V +L+ + + V + N + D ++
Sbjct: 408 AGQPVPLDLSPSLPARDRKFVEQLADSLHLKWSSVLNQHEERFLRVQLPTNDDDDDEDDD 467
Query: 401 KEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKER-------YYEEKFNAKTPEER 453
+E + + +L+ +A + ED E ++++ YY+ KF E
Sbjct: 468 DDESQIAILRVLKKYENAKVKEVTAEDAQMAAEKKYEKKFQDWKDKYYKGKFGWGL-ENT 526
Query: 454 EETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPF 513
EE RK + Y +GL WV+ YYY GV SW WFY YHYAP SD+ ++ F+LG PF
Sbjct: 527 EEMRK-LTENYVQGLQWVLFYYYRGVASWPWFYRYHYAPMISDIHLGLGADVDFKLGQPF 585
Query: 514 KPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPF 573
PF QL+GV P S +P + LMT P+SPI DFYP DFE+DMNGK+ W+ + K+PF
Sbjct: 586 FPFQQLMGVLPDRSKKIVPVAFHGLMTSPDSPIIDFYPRDFELDMNGKKMEWEAVVKIPF 645
Query: 574 IDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
I+E RLL + EH LT EE RN+ + F
Sbjct: 646 IEEERLLKAMATKEHLLTPEEKARNTFGVTLKFT 679
>gi|407036110|gb|EKE38009.1| 5'-3' exonuclease domain containing protein [Entamoeba nuttalli
P19]
Length = 779
Score = 366 bits (940), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 223/601 (37%), Positives = 340/601 (56%), Gaps = 82/601 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRF+ ++ + + EE++ + DSN ITPGTEFM +
Sbjct: 105 MNQQRSRRFKTAQSMVNQSFEEKK-------------SVFKEKPIDSNCITPGTEFMEAV 151
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S ++ YI R+N+ W I VI SD++VPGEGEHKI+ ++R Q++ Y+P RHC+Y
Sbjct: 152 SKVIKAYIKERMNSSKYWNSIIVIFSDSSVPGEGEHKIIDFIRRQKDCKNYNPYIRHCMY 211
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIMLALATHE +FSI+R+ + G DKC++CG+ H + +C K + D
Sbjct: 212 GLDADLIMLALATHERYFSIIRDKPYNKG--DKCYICGE-YHSSDSC--KNYNRVAPLDP 266
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
KP+ F+ LR+YL+ R+ + D E +DDFIF CF VGNDFLPH
Sbjct: 267 -------ITKPFIFVDCHVLRQYLNNTIRVE----KYDFERCLDDFIFFCFLVGNDFLPH 315
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+L+I+EGAI++L+ +Y K F GY+T+ + + V+ F+ VG E ++ R
Sbjct: 316 IPSLDIQEGAIDILIKIYLK-FLPENGYITENGTINFKIVKRFLHLVGKEEKQLLVNR-- 372
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRL 360
R+++EK D + + + D + QS
Sbjct: 373 -------RLRKEKEDQLYFD--KKMRELDYQI--------------------QS------ 397
Query: 361 DNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFN 420
R +P+ + + +I E E + E + Q +E + K +E++R +
Sbjct: 398 ----AFENRTEALPQRKTEIKV-KSIKEVELAKE-ESQLIRESLEKKKQEVVRQMEEL-- 449
Query: 421 SDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVC 480
+ D+++LGE G++ERYY++KF+ +E+ ++V Y EGL WV YYYEG
Sbjct: 450 ----KHDEIQLGEQGYEERYYQQKFHVDYKKEK-NIIIEIVDSYVEGLNWVFSYYYEGCQ 504
Query: 481 SWQWFYPYHYAPFASDL-KDLD-QFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKL 538
SW W+YPY+YAPFA D+ K LD +F + + G PF+PF QL+ V P S H LP+ +++L
Sbjct: 505 SWDWYYPYYYAPFAKDIGKLLDPEFEVQYTQGKPFRPFEQLMSVLPPQSKHCLPKEFQQL 564
Query: 539 MTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
M +SP+S+FYP DF++DMNG+R ++ IA + FI++ LL+ V+ IE L +++ +RN
Sbjct: 565 MNSTSSPLSNFYPEDFKIDMNGERSFYKAIALIGFINQKELLNVVEPIEKELGKKDQQRN 624
Query: 599 S 599
S
Sbjct: 625 S 625
>gi|425772513|gb|EKV10914.1| Exonuclease Kem1, putative [Penicillium digitatum PHI26]
Length = 1393
Score = 366 bits (940), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 228/647 (35%), Positives = 333/647 (51%), Gaps = 105/647 (16%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA + A+E+ ++Q E PK D+ FDSN ITPGTEFM L
Sbjct: 94 MNQQRARRFRTALDAEN--AKEKAIQQGLEM------PKEDA--FDSNCITPGTEFMQKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+I+ +++ D W+ ++++LS VPGEGEHKIM Y+R + P Y+ N RHCLY
Sbjct: 144 TKQLKYFINKKISEDTDWQGVEIVLSGHEVPGEGEHKIMEYIRCSKAQPDYESNVRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+Q +K+ E +
Sbjct: 204 GLDADLIMLGLLSHDPHFCLLREEV-TFGRQ-------------------VSKKSKELEH 243
Query: 181 KGDEVVVPKKPYQFLHIWTLRE-------------YLDYEFRIPNPPFEIDLECIVDDFI 227
+ + LH+ +RE LD+ F DLE ++DDFI
Sbjct: 244 QN---------FYLLHLSVVREYLELEFQELEQEGVLDFPF---------DLERVIDDFI 285
Query: 228 FMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAV 287
M FFVGNDFLP++P L I EGA+ L+ +YK+ +GGY+ + +++R+ + A+
Sbjct: 286 LMAFFVGNDFLPNLPNLHINEGALALMFKLYKEVLPKMGGYINEQGVINVQRLGMLVTAL 345
Query: 288 GSYEDRIF-----------------------QKRARL----HQRHAERIKREKAQARRGD 320
+ E R F Q++ L Q+ +I ++ R
Sbjct: 346 SAVEYRFFEAENSDAQWIKSKKDSNVTLSSSQQKKELTLTPSQKEILKIVKKYVLNRPDK 405
Query: 321 DVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGA 380
EPL P +L R RLA + +DN G +P +
Sbjct: 406 ASEPLDLPPTLPARDRTFVERLAD-------ELRLSWSSIDNENGDRFMRLLLPPTQGDS 458
Query: 381 TIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERY 440
EA + + ++ + KAK++++ A + ++K WK++Y
Sbjct: 459 DDDEEDEEASMAVQRIIRKYE---KAKVQDM-----TAEEAQKAAQEKYDAKFLEWKDKY 510
Query: 441 YEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDL 500
Y KF + +EE +K + Y +GL WV+ YYY G+ SW WF+ YHYAP SD+ D
Sbjct: 511 YRTKFGWGL-DNKEEMKK-LTQNYVQGLQWVLFYYYRGIASWPWFFQYHYAPMISDVNDG 568
Query: 501 DQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNG 560
++ F+LG PF+PF+QL+GV P S +P Y LMT P+SPI DFYP DF++DMNG
Sbjct: 569 LGADMDFKLGQPFRPFDQLMGVLPDRSKKIVPTAYWDLMTSPDSPIYDFYPRDFDLDMNG 628
Query: 561 KRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
K+ W+ + K+PFIDE RLLD +K E L+ +E RN A + F
Sbjct: 629 KKMEWEAVVKIPFIDEKRLLDALKTKETQLSADEKARNDFGACLKFT 675
>gi|325093685|gb|EGC46995.1| exonuclease II Exo2 [Ajellomyces capsulatus H88]
Length = 1451
Score = 366 bits (940), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 233/638 (36%), Positives = 334/638 (52%), Gaps = 77/638 (12%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA A+E+ ++Q E PK ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRARRFRTALDA--ELAKEKAIKQGIEM------PKEEA--FDSNCITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+I+ +++ D W+ ++++LS VPGEGEHKIM Y+R + PGY P+ RHCLY
Sbjct: 144 TQQLKYFINKKVSEDVEWQGVEIVLSGHEVPGEGEHKIMEYIRQSKAQPGYQPDIRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+Q +++K+ E +
Sbjct: 204 GLDADLIMLGLLSHDPHFCLLREEV-TFGRQ-------------------SQKKSKELEH 243
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGND 236
+ + +H+ +REYL+ EF+ F DLE ++DDFI M FFVGND
Sbjct: 244 QN---------FYLMHLCMVREYLELEFQELEEENALQFPFDLERVIDDFILMAFFVGND 294
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP++P L I EGA+ + VYK+ LGGY+ + +L R+ + ++ E R F+
Sbjct: 295 FLPNLPNLHINEGALAWMFKVYKQVLPKLGGYINEQGTINLERLGVLLDSLSDVEFRFFE 354
Query: 297 KRARLHQRHAERIKREKAQARRGDDVEPLAQPD--SLVPVSRFHGSRLASGPSPSPYQQS 354
+ R + K + + EP A ++ P + SR+ + P
Sbjct: 355 A-----EFSDARWIKSKMKGEELESSEPPANAKDFAISPAQKHIFSRIKKYVTHRPVNDQ 409
Query: 355 ECVGRLDNGKGTSGRPHK-VPRLSSGATIGAAIVEAENS-----FETDPQENKEEFKAKL 408
LD R K V +L+ + V E+ + +E + A
Sbjct: 410 GQFVPLDLSPNLPARDRKFVEQLADDLHLAWTTVSNEHGDRFLRVQLPSKETQTSGSAGD 469
Query: 409 KE---------LLR----------DKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKT 449
+ LLR ++ A + E K +L WK+ YY+ KF
Sbjct: 470 DDGDDEEGQIALLRVMKRYENAKVKETTAEEAQQAAEKKYELKFQEWKDNYYKSKFGWGM 529
Query: 450 PEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFEL 509
+ EE R+ + Y +GL WV++YYY GV SW WFY YHY+P SD+K + +++F+L
Sbjct: 530 -DNHEEMRQ-LTENYVQGLQWVLYYYYRGVASWPWFYQYHYSPMISDVKLGLEADMNFDL 587
Query: 510 GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIA 569
G PF PF QL+GV P S +P Y +LMT P SPI DFYP DFE+DMNGK+ W+ +
Sbjct: 588 GQPFHPFEQLMGVLPDRSKQIVPSAYHELMTSPESPIIDFYPRDFELDMNGKKMEWEAVV 647
Query: 570 KLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
K+PFIDE RLL + +H LT EE RN + F
Sbjct: 648 KIPFIDEKRLLSAMATKKHLLTPEENARNEFGVTLKFT 685
>gi|425774945|gb|EKV13236.1| Exonuclease Kem1, putative [Penicillium digitatum Pd1]
Length = 1393
Score = 366 bits (940), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 228/647 (35%), Positives = 333/647 (51%), Gaps = 105/647 (16%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA + A+E+ ++Q E PK D+ FDSN ITPGTEFM L
Sbjct: 94 MNQQRARRFRTALDAEN--AKEKAIQQGLEM------PKEDA--FDSNCITPGTEFMQKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+I+ +++ D W+ ++++LS VPGEGEHKIM Y+R + P Y+ N RHCLY
Sbjct: 144 TKQLKYFINKKISEDTDWQGVEIVLSGHEVPGEGEHKIMEYIRCSKAQPDYESNVRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+Q +K+ E +
Sbjct: 204 GLDADLIMLGLLSHDPHFCLLREEV-TFGRQ-------------------VSKKSKELEH 243
Query: 181 KGDEVVVPKKPYQFLHIWTLRE-------------YLDYEFRIPNPPFEIDLECIVDDFI 227
+ + LH+ +RE LD+ F DLE ++DDFI
Sbjct: 244 QN---------FYLLHLSVVREYLELEFQELEQEGVLDFPF---------DLERVIDDFI 285
Query: 228 FMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAV 287
M FFVGNDFLP++P L I EGA+ L+ +YK+ +GGY+ + +++R+ + A+
Sbjct: 286 LMAFFVGNDFLPNLPNLHINEGALALMFKLYKEVLPKMGGYINEQGVINVQRLGMLVTAL 345
Query: 288 GSYEDRIF-----------------------QKRARL----HQRHAERIKREKAQARRGD 320
+ E R F Q++ L Q+ +I ++ R
Sbjct: 346 SAVEYRFFEAENSDAQWIKSKKDSNVTLSSSQQKKELTLTPSQKEILKIVKKYVLNRPDK 405
Query: 321 DVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGA 380
EPL P +L R RLA + +DN G +P +
Sbjct: 406 ASEPLDLPPTLPARDRTFVERLAD-------ELRLSWSSIDNENGDRFMRLLLPPTQGDS 458
Query: 381 TIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERY 440
EA + + ++ + KAK++++ A + ++K WK++Y
Sbjct: 459 DDDEEDEEASMAVQRIIRKYE---KAKVQDM-----TAEEAQKAAQEKYDAKFLEWKDKY 510
Query: 441 YEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDL 500
Y KF + +EE +K + Y +GL WV+ YYY G+ SW WF+ YHYAP SD+ D
Sbjct: 511 YRTKFGWGL-DNKEEMKK-LTQNYVQGLQWVLFYYYRGIASWPWFFQYHYAPMISDVNDG 568
Query: 501 DQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNG 560
++ F+LG PF+PF+QL+GV P S +P Y LMT P+SPI DFYP DF++DMNG
Sbjct: 569 LGADMDFKLGQPFRPFDQLMGVLPDRSKKIVPTAYWDLMTSPDSPIYDFYPRDFDLDMNG 628
Query: 561 KRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
K+ W+ + K+PFIDE RLLD +K E L+ +E RN A + F
Sbjct: 629 KKMEWEAVVKIPFIDEKRLLDALKTKETQLSADEKARNDFGACLKFT 675
>gi|358371673|dbj|GAA88280.1| exonuclease Kem1 [Aspergillus kawachii IFO 4308]
Length = 1405
Score = 366 bits (940), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 233/632 (36%), Positives = 334/632 (52%), Gaps = 76/632 (12%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA A+E+ + Q E PK ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRARRFRTALDA--ETAKEKAIAQGIEM------PKEEA--FDSNCITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+I+ +++ D W+ ++++LS VPGEGEHKIM Y+R + P YDPN RHCLY
Sbjct: 144 TEQLKYFINKKISEDKDWQGVEIVLSGHEVPGEGEHKIMEYIRHAKAQPLYDPNVRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HFS+LRE V T G+Q ++K+ E +
Sbjct: 204 GLDADLIMLGLLSHDPHFSLLREEV-TFGRQ-------------------VQKKSKELEH 243
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNP----PFEIDLECIVDDFIFMCFFVGND 236
+ + LH+ +REYL+ EF+ F D+E ++DDFI M FFVGND
Sbjct: 244 QN---------FFLLHLCMVREYLELEFQELEQEGVLSFPFDMEKVIDDFILMAFFVGND 294
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP++P L I EGA+ + +YK+ +GGY+ + + R+ + A+ E R F+
Sbjct: 295 FLPNLPNLHINEGALAFMFKIYKESLPKMGGYINEQGVIKMDRLGILLDALSDVEFRFFE 354
Query: 297 KRARLHQRHAERIKREKAQARRGDDVEPLAQPD--SLVPVSRFHGSRLASGPSPSPYQQS 354
E + +A++GD EP +P ++ P + ++ P + +
Sbjct: 355 H---------EYSDAQWIRAKKGDVTEPQEKPKGFTITPAQKELFKQVKKYVLNRPGKAA 405
Query: 355 ECVGRLDNGKGTSGRPHK-VPRLSSGATIGAAIVEAENS-----------FETDPQENKE 402
E LD R K V +L+ + V E+ D + E
Sbjct: 406 ET-KPLDFASSLPARDRKFVEQLADDLRLPWTTVADEHGDRFIRVQLPGNDNDDSDDEDE 464
Query: 403 EFKAKLKELLRDKSDA-FNSDNPE------EDKVKLGEPGWKERYYEEKFNAKTPEEREE 455
E ++ ++R +A +PE E K + WK YY KF + E
Sbjct: 465 EASVAVQRIIRRYDNAKVQELSPEEAQQAAEKKYEAKFQEWKNNYYVGKFGWGL--DSHE 522
Query: 456 TRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKP 515
+++ Y +GL WV++YYY G+ SW WF+ YHYAP SD+K + +F LG PF+P
Sbjct: 523 EMRELTENYVQGLQWVLYYYYRGIASWPWFFKYHYAPMISDVKKGLNADTNFRLGKPFRP 582
Query: 516 FNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFID 575
+ QL+GV P S +P YR LMT P+SPI DFYP DFE+DMNGK+ W+ + K+PFI+
Sbjct: 583 YEQLMGVLPDRSKKTVPAAYRDLMTSPDSPIIDFYPRDFELDMNGKKMEWEAVVKIPFIE 642
Query: 576 EARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
E RLLD + EH LT EE RN A + F
Sbjct: 643 ERRLLDALATREHLLTPEEKARNGFGASLKFT 674
>gi|70985050|ref|XP_748031.1| exonuclease Kem1 [Aspergillus fumigatus Af293]
gi|66845659|gb|EAL85993.1| exonuclease Kem1, putative [Aspergillus fumigatus Af293]
gi|159126045|gb|EDP51161.1| exonuclease Kem1, putative [Aspergillus fumigatus A1163]
Length = 1418
Score = 366 bits (940), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 237/647 (36%), Positives = 335/647 (51%), Gaps = 102/647 (15%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA A+E+ + Q E PK D FDSN ITPGTEFMA L
Sbjct: 94 MNQQRARRFRTALDA--EVAKEKAIAQGIEM------PKEDP--FDSNCITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+I+ +++ D W+ + ++LS VPGEGEHKIM Y+R + PGYDPN RHCLY
Sbjct: 144 TQQLKYFINKKISEDKDWQGVDIVLSGHEVPGEGEHKIMEYIRHAKAQPGYDPNIRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+Q ++K E +
Sbjct: 204 GLDADLIMLGLLSHDPHFCLLREEV-TFGRQ-------------------VQKKPKELEH 243
Query: 181 KGDEVVVPKKPYQFLHIWTLRE-------------YLDYEFRIPNPPFEIDLECIVDDFI 227
+ + LH+ +RE LD+ F D+E ++DDFI
Sbjct: 244 QN---------FYLLHLCMVREYLELEFQELEQEGVLDFPF---------DMERVIDDFI 285
Query: 228 FMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAV 287
M FFVGNDFLP++P L I EGA++L+ +YK +GGY+ +G +L+R+ I+A+
Sbjct: 286 LMAFFVGNDFLPNLPNLHINEGALSLMFKIYKDVLPKMGGYVNEGGVINLKRLGMLIEAL 345
Query: 288 GSYEDRIFQ-----KRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSR- 341
E R F+ R +R+ E + +G + P AQ + + ++ +R
Sbjct: 346 SDVEFRFFEAEYSDARWINAKRNGVANGSEFQEKPKGLTLTP-AQKELFKEIKKYVLNRP 404
Query: 342 -LASGPSPSPYQQSECVGRLDNGKGTSGRPHK-VPRLSSGATIGAAIVEAE--------- 390
ASG P LD R K V +L+ + V E
Sbjct: 405 EKASGSKP-----------LDLSPTLPARDRKFVEQLADDLRLPWTTVADEHGDRFIRLQ 453
Query: 391 ---NSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGW-------KERY 440
N + +E EE ++ ++R +A + E+ K E + K++Y
Sbjct: 454 LPVNEDDDSEEEEDEEASMAVQRVIRRYDNAKVQEISPEEAQKAAEKKYEEKFQDWKDKY 513
Query: 441 YEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDL 500
Y KF + EE RK + Y +GL WV++YYY G+ SW WF+ YHYAP SD+
Sbjct: 514 YMSKFGWGL-DNHEELRK-LTENYVQGLQWVLYYYYRGIASWPWFFKYHYAPMISDVIKG 571
Query: 501 DQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNG 560
+++F+LG PFKP+ QL+GV P S +P +R LMT P SPI DFYP +FE+DMNG
Sbjct: 572 LNADMNFKLGQPFKPYEQLMGVLPDRSKQIVPAAFRDLMTSPESPIIDFYPREFELDMNG 631
Query: 561 KRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
K+ W+ + K+PFIDE RLL+ + EH LT EE RN + F
Sbjct: 632 KKMEWEAVVKIPFIDERRLLEALATREHLLTPEEKARNGFGVSLKFT 678
>gi|225557050|gb|EEH05337.1| exonuclease [Ajellomyces capsulatus G186AR]
Length = 1454
Score = 365 bits (938), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 232/638 (36%), Positives = 336/638 (52%), Gaps = 77/638 (12%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA A+E+ ++Q E PK ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRARRFRTALDA--ELAKEKAIKQGIEM------PKEEA--FDSNCITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+I+ +++ D W+ ++++LS VPGEGEHKIM Y+R + PGY P+ RHCLY
Sbjct: 144 TQQLKYFINKKVSEDVEWQGVEIVLSGHEVPGEGEHKIMEYIRQSKAQPGYQPDIRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+Q +++K+ E +
Sbjct: 204 GLDADLIMLGLLSHDPHFCLLREEV-TFGRQ-------------------SQKKSKELEH 243
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGND 236
+ + +H+ +REYL+ EF+ F DLE ++DDFI M FFVGND
Sbjct: 244 QN---------FYLMHLCMVREYLELEFQELEEENALQFPFDLERVIDDFILMAFFVGND 294
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP++P L I EGA+ + VYK+ LGGY+ + +L R+ + ++ E R F+
Sbjct: 295 FLPNLPNLHINEGALAWMFKVYKQVLPKLGGYINEQGTINLERLGVLLDSLSDVEFRFFE 354
Query: 297 KRARLHQRHAERIKREKAQARRGDDVEPLAQPD--SLVPVSRFHGSRLASGPSPSPYQQS 354
+ R + K + + EP A ++ P + +R+ + P
Sbjct: 355 A-----EFSDARWIKSKMKGEELESSEPPANAKDFAISPAQKHIFNRIKKYVTHRPVNDQ 409
Query: 355 ECVGRLDNGKGTSGRPHK-VPRLSSGATIGAAIVEAEN----------SFETDP------ 397
LD R K V +L+ + V E+ S ET
Sbjct: 410 GQSVPLDLSPNLPARDRKFVEQLADDLHLAWTTVSNEHGDRFLRVQLPSKETQTSGSSGD 469
Query: 398 -QENKEEFKAKLKELLR-------DKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKT 449
+ EE + L +++ ++ A + E K +L WK+ YY+ KF
Sbjct: 470 DDGDDEEGQIALLRVMKRYENAKVKETTAEEAQQAAEKKYELKFQEWKDNYYKSKFGWGM 529
Query: 450 PEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFEL 509
+ EE R+ + Y +GL WV++YYY GV SW WFY YHY+P SD+K + +++F+L
Sbjct: 530 -DNHEEMRQ-LTENYVQGLQWVLYYYYRGVASWPWFYQYHYSPMISDVKLGLEADMNFDL 587
Query: 510 GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIA 569
G PF PF QL+GV P S +P + +LMT P SPI DFYP DFE+DMNGK+ W+ +
Sbjct: 588 GQPFHPFEQLMGVLPDRSKQIVPSAFHELMTSPESPIIDFYPRDFELDMNGKKMEWEAVV 647
Query: 570 KLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
K+PFIDE RLL + +H LT EE RN + F
Sbjct: 648 KIPFIDEKRLLSAMATKKHLLTPEENARNEFGVTLKFT 685
>gi|302656474|ref|XP_003019990.1| hypothetical protein TRV_05959 [Trichophyton verrucosum HKI 0517]
gi|291183768|gb|EFE39366.1| hypothetical protein TRV_05959 [Trichophyton verrucosum HKI 0517]
Length = 1303
Score = 365 bits (938), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 231/634 (36%), Positives = 336/634 (52%), Gaps = 75/634 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA E +++ +EG ++P K D+ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRARRFRTALDA-------ELAKEKAIKEGVEMP-KEDA--FDSNCITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+I+ +++ D W+ ++V+LS VPGEGEHKIM Y+R + P YDPN RHCLY
Sbjct: 144 TKQLKYFINKKVSEDAEWQGVEVVLSGHEVPGEGEHKIMEYIRQAKAQPEYDPNMRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+Q +++K+ E +
Sbjct: 204 GLDADLIMLGLLSHDPHFCLLREEV-TFGRQ-------------------SQKKSKELEH 243
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGND 236
+ + LH+ +REYL+ EF+ F D+E I+DDFI M FFVGND
Sbjct: 244 QN---------FYLLHLCIVREYLELEFQELKLDGALQFPFDMERIIDDFILMAFFVGND 294
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP++P L I EGA+ + VYK LGGY+ + ++ R+ + A+ E R F+
Sbjct: 295 FLPNLPNLHINEGALAWMFKVYKDVLPKLGGYVNEHGTINMERLRTLLAALSDVEFRFFE 354
Query: 297 KRARLHQRHAERIKREKAQARRGDDVEPL-AQPD--SLVPVSRFHGSRLASGPSPSPYQQ 353
+ K++ GD L +P+ ++ P + +R+ + P +
Sbjct: 355 A-------EYSDARWLKSKTLDGDQTPTLPEKPNVLTITPAQKHIFNRIKKYVTHRPMDE 407
Query: 354 SECVGRLDNGKGTSGRPHK-VPRLSSGATIGAAIVEAE------------NSFETDPQEN 400
+ LD R K V +L+ + + V + N + D ++
Sbjct: 408 AGQPVPLDLSPSLPARDRKFVEQLADSLHLKWSSVLNQHEERFLRVQLPTNDDDDDEDDD 467
Query: 401 KEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKER-------YYEEKFNAKTPEER 453
+E + + +L+ +A + ED E ++++ YY+ KF E
Sbjct: 468 DDESQIAILRVLKKYENAKVKEVTAEDAQMAAEKKYEKKFQDWKDKYYKGKFGWGL-ENT 526
Query: 454 EETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPF 513
EE RK + Y +GL WV+ YYY GV SW WFY YHYAP SD+ ++ F+LG PF
Sbjct: 527 EEMRK-LTENYVQGLQWVLFYYYRGVASWPWFYRYHYAPMISDIHLGLGADVDFKLGQPF 585
Query: 514 KPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPF 573
PF QL+GV P S +P + LMT P+SPI DFYP DFE+DMNGK+ W+ + K+PF
Sbjct: 586 FPFQQLMGVLPDRSKKIVPVAFHSLMTSPDSPIIDFYPRDFELDMNGKKMEWEAVVKIPF 645
Query: 574 IDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
I+E RLL + EH LT +E RN+ + F
Sbjct: 646 IEEERLLKAMATKEHLLTPDEKARNTFGVTLKFT 679
>gi|255955773|ref|XP_002568639.1| Pc21g16320 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211590350|emb|CAP96529.1| Pc21g16320 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1390
Score = 365 bits (937), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 239/700 (34%), Positives = 361/700 (51%), Gaps = 101/700 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA + A+E+ ++Q E PK D FDSN ITPGTEFM L
Sbjct: 94 MNQQRARRFRTALDAEN--AKEKAIQQGLEM------PKEDP--FDSNCITPGTEFMQKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+I+ +++ D W+ ++++LS VPGEGEHKIM Y+R + P Y+ N RHCLY
Sbjct: 144 TKQLKYFINKKISEDTDWQGVEIVLSGHEVPGEGEHKIMEYIRCSKAQPDYESNVRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+Q +K E +
Sbjct: 204 GLDADLIMLGLLSHDPHFCLLREEV-TFGRQ-------------------VSKKPKELEH 243
Query: 181 KGDEVVVPKKPYQFLHIWTLRE-------------YLDYEFRIPNPPFEIDLECIVDDFI 227
+ + LH+ +RE LD+ F D+E ++DDFI
Sbjct: 244 QN---------FYLLHLSVVREYLELEFQELEQEGVLDFPF---------DMERVIDDFI 285
Query: 228 FMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAV 287
M FFVGNDFLP++P L I EGA+ L+ +YK+ +GGY+ + +++R+ + A+
Sbjct: 286 LMAFFVGNDFLPNLPNLHINEGALALMFKLYKEVLPKMGGYINEQGVINVQRLGMLVTAL 345
Query: 288 GSYEDRIFQKRAR----LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLA 343
+ E R F+ + + I +Q ++ + P +Q + L V ++ +R
Sbjct: 346 SAVEYRFFEAENSDAQWIKSKKDSNIDYSSSQQKKELTLTP-SQKEILKTVKKYVLNRSE 404
Query: 344 SGPSP------SPYQQSECVGR-----------LDNGKGTSGRPHKVPRLSSGATIGAAI 386
P P + V R LDN G +P + +
Sbjct: 405 KASEPLDLPPTLPARDRTFVERLADELRLSWSSLDNENGDRFMRLSLPPTQADSDDDEED 464
Query: 387 VEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFN 446
EA + + ++ + KAK++E+ ++ + ++K WK+ YY KF
Sbjct: 465 EEASMAVQRIIRKYE---KAKVQEMTPEE-----AQKAAQEKYDAKFLQWKDNYYRTKFG 516
Query: 447 AKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNIS 506
+ +EE +K + Y +GL WV+ YYY G+ SW WF+ YHYAP SD+ D +++
Sbjct: 517 WGL-DNKEEMKK-LARNYVQGLQWVLFYYYRGIASWPWFFQYHYAPMISDVNDGLDADMN 574
Query: 507 FELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQ 566
F+LG PF+PF+QL+GV P S +P Y LMT P+SPI DFYP DF++DMNGK+ W+
Sbjct: 575 FKLGQPFRPFDQLMGVLPDRSKKIVPTAYWDLMTSPDSPIYDFYPRDFDLDMNGKKMEWE 634
Query: 567 GIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF-----VLLSHPLSA-SIYTL 620
+ K+PFIDE RLLD +K E+ L+ +E RN A + F V +P S ++
Sbjct: 635 AVVKIPFIDEKRLLDALKTKENQLSADEKARNDFGACLKFTYSPDVNFVYPSSMPGVFPD 694
Query: 621 DEHCKQLKIKERVEVKERLNP--ELSDGMNGYISPCAGDP 658
C+ ++ + V + L P L DG++ I+ AG P
Sbjct: 695 LPSCRCIENMFDLPVMDGLEPYAGLMDGVHLGIAALAGFP 734
>gi|449708316|gb|EMD47799.1| 5'3' exonuclease domain containing protein [Entamoeba histolytica
KU27]
Length = 779
Score = 365 bits (936), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 222/601 (36%), Positives = 340/601 (56%), Gaps = 82/601 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRF+ +++ + + EE++ + DSN ITPGTEFM +
Sbjct: 105 MNQQRSRRFKTAQNMVNQSFEEKK-------------SVFKEKPIDSNCITPGTEFMEAV 151
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S ++ YI R+N+ W I VI SD++VPGEGEHKI+ ++R Q++ Y+P RHC+Y
Sbjct: 152 SKVIKAYIKERMNSSKYWNSIIVIFSDSSVPGEGEHKIIDFIRRQKDCKNYNPYIRHCMY 211
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIMLALATHE +FSI+R+ + G DKC++CG+ H + +C K + D
Sbjct: 212 GLDADLIMLALATHERYFSIIRDKPYNKG--DKCYICGE-YHSSDSC--KNYNRVAPLDP 266
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
KP+ F+ LR+YL+ ++ + D E +DDFIF CF VGNDFLPH
Sbjct: 267 -------ITKPFIFVDCHVLRQYLNNTIKVE----KYDFERCLDDFIFFCFLVGNDFLPH 315
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+L+I+EGAI++L+ +Y K F GY+T+ + + V+ F+ VG E ++ R
Sbjct: 316 IPSLDIQEGAIDILIKIYLK-FLPENGYITENGTINFKIVKRFLHLVGKEEKQLLVNR-- 372
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRL 360
R+++EK D + + + D + QS
Sbjct: 373 -------RLRKEKEDQLYFD--KKMRELDYQI--------------------QS------ 397
Query: 361 DNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFN 420
R +P+ + + +I E E + E + Q +E + K +E++R +
Sbjct: 398 ----AFENRTEALPQRKTEIKV-KSIKEVELAKE-ESQLIRESLEKKKQEVVRQMEEL-- 449
Query: 421 SDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVC 480
+ D+++LGE G++ERYY++KF+ +E+ ++V Y EGL WV YYYEG
Sbjct: 450 ----KHDEIQLGEQGYEERYYQQKFHVDYKKEKNNII-EIVDSYVEGLNWVFSYYYEGCQ 504
Query: 481 SWQWFYPYHYAPFASDL-KDLD-QFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKL 538
SW W+YPY+YAPFA D+ K LD +F + G PF+PF QL+ V P S H LP+ +++L
Sbjct: 505 SWDWYYPYYYAPFAKDIGKLLDPEFEVQHTQGKPFRPFEQLMSVLPPQSKHCLPKEFQQL 564
Query: 539 MTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
M +SP+S FYP DF++DMNG+R ++ IA + FI++ +LL+ V+ IE L +++ +RN
Sbjct: 565 MNSTSSPLSSFYPEDFKIDMNGERSFYKAIALIGFINQKKLLNVVEPIEKELGKKDQQRN 624
Query: 599 S 599
S
Sbjct: 625 S 625
>gi|240277600|gb|EER41108.1| exonuclease II Exo2 [Ajellomyces capsulatus H143]
Length = 1138
Score = 364 bits (934), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 234/638 (36%), Positives = 335/638 (52%), Gaps = 77/638 (12%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA A+E+ ++Q E PK ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRARRFRTALDA--ELAKEKAIKQGIEM------PKEEA--FDSNCITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+I+ +++ D W+ ++++LS VPGEGEHKIM Y+R + PGY P+ RHCLY
Sbjct: 144 TQQLKYFINKKVSEDVEWQGVEIVLSGHEVPGEGEHKIMEYIRQSKAQPGYQPDIRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+Q +++K+ E +
Sbjct: 204 GLDADLIMLGLLSHDPHFCLLREEV-TFGRQ-------------------SQKKSKELEH 243
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGND 236
+ + +H+ +REYL+ EF+ F DLE ++DDFI M FFVGND
Sbjct: 244 QN---------FYLMHLCMVREYLELEFQELEEENALQFPFDLERVIDDFILMAFFVGND 294
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP++P L I EGA+ + VYK+ LGGY+ + +L R+ + ++ E R F+
Sbjct: 295 FLPNLPNLHINEGALAWMFKVYKQVLPKLGGYINEQGTINLERLGVLLDSLSDVEFRFFE 354
Query: 297 KRARLHQRHAERIKREKAQARRGDDVEPLAQPD--SLVPVSRFHGSRLASGPSPSPYQQS 354
+ R + K + + EP A ++ P + SR+ + P
Sbjct: 355 A-----EFSDARWIKSKMKGEELESSEPPANAKDFAISPAQKHIFSRIKKYVTHRPVNDQ 409
Query: 355 ECVGRLDNGKGTSGRPHK-VPRLSSGATIGAAIVEAEN----------SFETDPQENKEE 403
LD R K V +L+ + V E+ S ET + +
Sbjct: 410 GQSVPLDLSPNLPARDRKFVEQLADDLHLAWTTVSNEHGDRFLRVQLPSKETQTSGSAGD 469
Query: 404 FK--------AKLKELLR------DKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKT 449
A L+ + R ++ A + E K +L WK+ YY+ KF
Sbjct: 470 DDGDDEEGQIALLRVMKRYENAKVKETTAEEAQQAAEKKYELKFQEWKDNYYKSKFGWAM 529
Query: 450 PEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFEL 509
+ EE R+ + Y +GL WV++YYY GV SW WFY YHY+P SD+K + +++F+L
Sbjct: 530 -DNHEEMRQ-LTENYVQGLQWVLYYYYRGVASWPWFYQYHYSPMISDVKLGLEADMNFDL 587
Query: 510 GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIA 569
G PF PF QL+GV P S +P Y +LMT P SPI DFYP DFE+DMNGK+ W+ +
Sbjct: 588 GQPFHPFEQLMGVLPDRSKQIVPSAYHELMTSPESPIIDFYPRDFELDMNGKKMEWEAVV 647
Query: 570 KLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
K+PFIDE RLL + +H LT EE RN + F
Sbjct: 648 KIPFIDEKRLLSAMATKKHLLTPEENARNEFGVTLKFT 685
>gi|167539832|ref|XP_001741374.1| 5'-3' exoribonuclease [Entamoeba dispar SAW760]
gi|165894075|gb|EDR22159.1| 5'-3' exoribonuclease, putative [Entamoeba dispar SAW760]
Length = 779
Score = 363 bits (933), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 225/602 (37%), Positives = 336/602 (55%), Gaps = 84/602 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRF+ + + + + EE++ + DSN ITPGTEFM +
Sbjct: 105 MNQQRSRRFKTAYNMENQSFEEKK-------------SIFKEKPVDSNCITPGTEFMEAV 151
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S ++ YI R+N+ W I VI SD++VPGEGEHKI+ ++R Q++ Y+P RHC+Y
Sbjct: 152 SKVIKAYIKERMNSSKYWNSIIVIFSDSSVPGEGEHKIIDFIRRQKDCKNYNPYIRHCMY 211
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIMLALATHE +FSI+R+ + G DKC++CG H +C K + D
Sbjct: 212 GLDADLIMLALATHERYFSIIRDKPYNKG--DKCYICGD-YHSPDHC--KNYNRIAPLDP 266
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
KP+ F+ LR+YL+ ++ + D E +DDFIF CF VGNDFLP
Sbjct: 267 -------ITKPFIFVDCHVLRQYLNKTIKVE----KYDFERCLDDFIFFCFLVGNDFLPR 315
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+L+I+EGAI++L+ +Y K F GY+T+ +++ V+ F+ VG E ++ R R
Sbjct: 316 IPSLDIQEGAIDILIKIYLK-FLPENGYITENGTINIKIVKKFLHLVGKEEKQLLVNR-R 373
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQ-QSECVGR 359
L + ++I +K + R D YQ QS R
Sbjct: 374 LRKEKEDQIYFDK-RMRELD------------------------------YQIQSAFENR 402
Query: 360 LDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAF 419
T P + + + + + E+ Q KE + K +EL +
Sbjct: 403 ------TEALPQRKTEIKVKSIKEVQLAKEES------QLIKESLEKKKQELFHQIEELK 450
Query: 420 NSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGV 479
N D+++LGEPG++ERYY++KF+ + +E+ +++ Y EGL WV YYYEG
Sbjct: 451 N------DEIQLGEPGYEERYYQQKFHVEYKKEKSLVI-EIIESYVEGLNWVFSYYYEGC 503
Query: 480 CSWQWFYPYHYAPFASDL-KDLD-QFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRK 537
SW W+YPY+YAPFA D+ K LD +F + + G PF+PF QLL V P S H LP+ +R+
Sbjct: 504 QSWDWYYPYYYAPFAKDIGKLLDPEFEVQYTQGKPFRPFEQLLSVLPPQSKHCLPKEFRQ 563
Query: 538 LMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARR 597
LM +SP+S+FYP +F++DMNG+R ++ IA + FI++ +LL V+ IE L +++ +R
Sbjct: 564 LMNSTSSPLSNFYPEEFKIDMNGERSFYKAIALIGFINQKKLLSVVEPIEKDLGKKDQQR 623
Query: 598 NS 599
NS
Sbjct: 624 NS 625
>gi|195457130|ref|XP_002075439.1| GK17975 [Drosophila willistoni]
gi|194171524|gb|EDW86425.1| GK17975 [Drosophila willistoni]
Length = 1638
Score = 363 bits (931), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 211/599 (35%), Positives = 307/599 (51%), Gaps = 101/599 (16%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR +++A ++ E + + K + FDSN ITPGT FM L
Sbjct: 94 MNQQRSRRFRTAREA-----------EQLETKASQRGEKRQHERFDSNCITPGTVFMERL 142
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+AL+ ++ +++ DP W+K +VILS PGEGEHKIM Y+R ++ P +DPNTRHCLY
Sbjct: 143 QLALRSFLRTKISLDPLWQKCRVILSGEETPGEGEHKIMDYIRYLKSQPNFDPNTRHCLY 202
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLI+L L THE+HF +LRE V +F
Sbjct: 203 GLDADLIILGLCTHELHFVVLREEV-------------------------------KFGR 231
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEF-RIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
+ + + LH+ LREYL+ EF + ++D+ ++DD++ M F VGNDF+P
Sbjct: 232 NVKRATLEETRFYLLHLGLLREYLELEFNELSTKEKKLDVAQLIDDWVLMGFMVGNDFIP 291
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
++P L I A+ LL Y + + LGG + + K +LRR++ F+ A+ E + F+
Sbjct: 292 NLPCLHISSNALPLLYKTYIQVYPQLGGNINERGKLNLRRLQIFMTALSEVELQQFED-- 349
Query: 300 RLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGR 359
H + +K A+ D V VS + A+G S + S+ V
Sbjct: 350 -----HFDDLKYMNAKTEAFD-----------VDVSEIQSAS-ANGESFN----SDLVAL 388
Query: 360 LDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAF 419
+DN S E D F L + D + F
Sbjct: 389 IDNSMKASS-------------------------EID-------FIITLYDYDSDDEEHF 416
Query: 420 NSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGV 479
E ++ +K YY KF E + + +++ Y L W++ YYY GV
Sbjct: 417 EDLTDEASSLRHEFQNYKRNYYRNKFKR---EMKGDLVEELTHHYITALQWILDYYYRGV 473
Query: 480 CSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLM 539
SW W+YP+HYAPF SDLK+++ I F+LG PF PF QLL V P+ASS LP Y LM
Sbjct: 474 QSWDWYYPFHYAPFISDLKNIENVKIHFQLGRPFLPFQQLLAVLPAASSKLLPIAYHDLM 533
Query: 540 TDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
+P+S +++FYPT+FE D+NGK++ W+ + +PFIDE RLL+ ++ E+ LT E RN
Sbjct: 534 LNPDSALAEFYPTEFESDLNGKKHDWEAVVLIPFIDERRLLEAMRPCENCLTTAERSRN 592
>gi|295657260|ref|XP_002789200.1| 5'-3' exoribonuclease [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284447|gb|EEH40013.1| 5'-3' exoribonuclease [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1445
Score = 361 bits (926), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 236/640 (36%), Positives = 339/640 (52%), Gaps = 78/640 (12%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA A+E+ ++Q E PK ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRARRFRTAYDA--EVAKEKAIKQGIEM------PKEEA--FDSNCITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+I+ +++ D W+ ++++LS VPGEGEHKIM Y+R + PGY P+ RHCLY
Sbjct: 144 TQQLKYFINKKVSEDVEWQGVEIVLSGHEVPGEGEHKIMEYIRQTKAQPGYHPDVRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+Q +++K+ E +
Sbjct: 204 GLDADLIMLGLLSHDPHFCLLREEV-TFGRQ-------------------SQKKSKELEH 243
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGND 236
+ + +H+ +REYL+ EF+ F DLE I+DDFI M FFVGND
Sbjct: 244 QN---------FYLMHLCMVREYLELEFQELEEEDALQFPFDLERIIDDFILMAFFVGND 294
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP++P L I EGA+ + +YK+ LGGY+ + +L R+ + ++ E R F+
Sbjct: 295 FLPNLPNLHINEGALAWMFKIYKQVLPKLGGYINEQGTINLERLGILLDSLSDVEFRFFE 354
Query: 297 KRARLHQRHAERIK-REKAQARRGDDVEP--LAQPDSLVPVSRFHGSRLASGPSPSPYQQ 353
A IK + K ++ EP +++ ++ P + +R+ S P
Sbjct: 355 A----EYSDARWIKSKVKGGGLEKENPEPSQISKEFTISPAQKHIFNRIRKYVSHHPVND 410
Query: 354 SECVGRLDNGKGTSGRPHK-VPRLSSGATIGAAIVE------------------AENSFE 394
LD R K V +L+ + V A +F
Sbjct: 411 QGKPVPLDLSSNLPARDRKFVEQLADDLHLQWTTVSNEHGDRFLRVQLPSREDPANGNFG 470
Query: 395 TDPQENKEEFKAKLKELLRDKSDAFNSDNPEED-------KVKLGEPGWKERYYEEKFNA 447
D EN+E+ + L ++R +A + E+ K +L WK YY+ KF
Sbjct: 471 EDDDENEEDGQIALLRVMRRYENAKVKETTAEEAQQAAEKKYELKFQEWKNNYYKSKFRW 530
Query: 448 KTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISF 507
+ EE RK + Y +GL WV++YYY GV SW WFY YHY+P SD+K + +++F
Sbjct: 531 GM-DNHEEMRK-LTENYVQGLQWVLYYYYRGVASWPWFYQYHYSPMISDVKLGLKADMNF 588
Query: 508 ELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQG 567
+LG PF PF QL+GV P S +P + +LMT P SPI DFYP DFE+DMNGK+ W+
Sbjct: 589 DLGQPFHPFQQLMGVLPDRSKQIVPAAFHELMTSPESPIIDFYPRDFELDMNGKKMDWEA 648
Query: 568 IAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
+ K+PFI+E RLL + EH LT EE RN + F
Sbjct: 649 VVKIPFIEEKRLLKAMATKEHLLTPEEKARNEFGVTLKFT 688
>gi|402082044|gb|EJT77189.1| 5'-3' exoribonuclease 1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1452
Score = 361 bits (926), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 227/632 (35%), Positives = 325/632 (51%), Gaps = 71/632 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA E+ R + EG++LP + + FDSN ITPGT FMA L
Sbjct: 94 MNQQRARRFRTALDA-------EQARDKAISEGKELPKE---EPFDSNCITPGTAFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S L+Y+++ +++ D W+ +++LS VPGEGEHKIM Y+R + P Y+ N RHCLY
Sbjct: 144 SEQLKYFVNKKVSEDKEWQGCEIVLSGHEVPGEGEHKIMEYIRNAKAQPDYNDNVRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+Q + K+ E +
Sbjct: 204 GLDADLIMLGLLSHDPHFCLLREEV-TFGRQSQA-------------------KSKELEH 243
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNP----PFEIDLECIVDDFIFMCFFVGND 236
+ + LH+ +REYL+ EF+ F D+E ++DDFI M FFVGND
Sbjct: 244 QN---------FYLLHLCIVREYLELEFQELKKEGAMSFPFDMERVIDDFILMAFFVGND 294
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP++P L I EGA+ L+ +YK+ GY+ +G +L R+ ++ + E R F
Sbjct: 295 FLPNLPHLHINEGALALMFKLYKQILPKCDGYINEGGTVNLHRLGLLLEGLSEAEHRFFD 354
Query: 297 KRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSEC 356
E R K Q + ++P + V+ + S P+
Sbjct: 355 V-----DMQNENWYRAKQQMDNPETAMAKSRPKGQLQVTTSQKNIWKH--SLRPFINKRA 407
Query: 357 VGRLDNGKGTSGRPHKVP-------RLSSGATIG-----AAIVEAENSFETDPQENKEE- 403
L+ G G + K RL + + ++ S E + EE
Sbjct: 408 TKTLNLGSGLNAADRKFAQEVADSFRLKWESPADEEGNRSLVITLPQSPEASDDDGFEEE 467
Query: 404 -FKAKLKELLRDKSDAFNSDNPEEDKVKLGE------PGWKERYYEEKFNA-KTPEEREE 455
A +E+L+ A +PEE K + WK++YY EKF TPE +EE
Sbjct: 468 GNAAAHREMLKYDRAAVVDTSPEEAKEAMERLYQQKFQEWKDKYYSEKFEEWSTPELKEE 527
Query: 456 TRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKP 515
+ + Y +GL WV++YYY G+ SW WFY YHY+P SD+ +++F+LG PF+P
Sbjct: 528 GLRQLCENYVQGLQWVLYYYYRGIRSWPWFYKYHYSPMISDVMKGLNADMNFKLGQPFRP 587
Query: 516 FNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFID 575
F QL+GV P S +P Y LMT +SPI DFYP DF +DMNGK+ W+ + K+PFID
Sbjct: 588 FEQLMGVLPDRSKKIVPTVYWPLMTQADSPIIDFYPRDFVLDMNGKKQDWEAVVKIPFID 647
Query: 576 EARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
E RLLD + L ++E RN + F
Sbjct: 648 ERRLLDAMATKNDLLADDEKARNGFGVALKFT 679
>gi|396497754|ref|XP_003845052.1| similar to 5'-3' exoribonuclease [Leptosphaeria maculans JN3]
gi|312221633|emb|CBY01573.1| similar to 5'-3' exoribonuclease [Leptosphaeria maculans JN3]
Length = 1425
Score = 360 bits (925), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 232/634 (36%), Positives = 331/634 (52%), Gaps = 73/634 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA E+ R++ REG ++P + + FDSN ITPGT FMA L
Sbjct: 94 MNQQRARRFRTALDA-------EKAREKAIREGVEMPTE---EAFDSNCITPGTAFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+I+ +++ D W+ ++V+LS VPGEGEHKIM Y+R + P YDPN RHCLY
Sbjct: 144 TQQLKYFINKKISEDLDWQGVEVVLSGHEVPGEGEHKIMEYIRQAKAQPDYDPNRRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HFS+LRE V T G+Q ++ K+ E +
Sbjct: 204 GLDADLIMLGLLSHDPHFSLLREEV-TFGRQ-------------------SQTKSKELEH 243
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGND 236
+ + +H+ +REYL+ EF+ P F D+E ++DDFI M FFVGND
Sbjct: 244 QN---------FYLMHLCIVREYLELEFQELEEPGALSFPFDMERVIDDFILMAFFVGND 294
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP++P L I EGA+ L+ VYK GY+ + ++ R+ + + E R F+
Sbjct: 295 FLPNLPHLHINEGALALMFNVYKTVLPKAKGYINEEGVINMERLALLLDELSQIEYRHFE 354
Query: 297 -KRARLHQRHAERIKREKAQ---ARRGDDVEPLAQPDSLVPVSRFHGSRLAS---GPSPS 349
+ A +R+ +E A+RG V Q + V + + L P
Sbjct: 355 SENADAAWFKGKRLGKEDVMVKTAKRGTVVMSTQQKELFSKVKSWLSTYLEKKEQAPLDI 414
Query: 350 PYQQS--------ECVGRL----DNGKGTSGRPH----KVPRLSSGATIGAAIVEAENSF 393
P + E +L G H P+L + S
Sbjct: 415 PVSLNAEDRKFVQELADKLHLPWKTVTNDEGERHLQITTPPKLVEDVDDDEEEEMDDEST 474
Query: 394 ETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEER 453
+ + ++ +AK+ ++ D++ A +E WK YY+ KF+ E
Sbjct: 475 KAIARVVQKYEQAKIVDISPDEAQAAMQKKYDEKF-----DAWKNDYYKSKFDWDRSNE- 528
Query: 454 EETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPF 513
EE RK + Y +GL WV++YYY GV SW W+Y YHY+P SD+K + +I+F+LG PF
Sbjct: 529 EELRK-LTENYVQGLQWVLYYYYRGVASWPWYYGYHYSPMISDVKRGLKADINFKLGQPF 587
Query: 514 KPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPF 573
KPF QL+GV P S +PE Y LMT +SPI DFYP DF +DMNGK+ W+ + K+PF
Sbjct: 588 KPFQQLMGVLPDRSKSIVPEAYHPLMTSEDSPIIDFYPRDFTLDMNGKKQDWEAVVKIPF 647
Query: 574 IDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
I E RLL + EH LT +E RN + F
Sbjct: 648 IQEDRLLSAMATKEHNLTADEKSRNGFGVSLKFT 681
>gi|156537119|ref|XP_001603129.1| PREDICTED: 5'-3' exoribonuclease 1-like isoform 1 [Nasonia
vitripennis]
Length = 1739
Score = 360 bits (925), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 213/602 (35%), Positives = 299/602 (49%), Gaps = 109/602 (18%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
+NQQR RRFRA+K+A A+ QE +E R FDSN ITPGT FM+ L
Sbjct: 94 INQQRGRRFRAAKEAEVLEAKARAKGQEIPKEAR----------FDSNCITPGTVFMSKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+I +++ D W+K K+ILS + VPGEGEHKIM Y+R + P Y+ NTRHCLY
Sbjct: 144 NEQLKYFITYKISTDKLWQKCKIILSGSEVPGEGEHKIMDYIRYMKAQPDYEGNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V +F +
Sbjct: 204 GLDADLIMLGLCSHEPHFSLLREEV-------------------------------KFGK 232
Query: 181 KGDEVVVPKKP-YQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDF 237
+++ P++ + LH+ +REYL++EF F+ D+E I+DD++ M F VGNDF
Sbjct: 233 TQKKILTPEETNFCLLHLSLMREYLEHEFSPVKDKLTFKFDIEKIIDDWVLMGFLVGNDF 292
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I GA+ LL Y L GY+ + +L R E F++ +G Y+ F
Sbjct: 293 IPHLPNLHIENGALPLLYNAYMDVLPTLDGYINEAGTLNLERFEKFMEKLGKYDLEQFD- 351
Query: 298 RARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECV 357
+ +A+ E RR ++ E ++
Sbjct: 352 -----EIYADLKFFEAKTGRRLNESERNSK------------------------------ 376
Query: 358 GRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSD 417
N + P K + + A I+ EN D E+ L +SD
Sbjct: 377 ----NSPDENASPKK-----TNKALNALIMATENELGADSDED-----------LEGESD 416
Query: 418 AFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYE 477
+ + +++L K YY K + ET + Y + W +HYYY
Sbjct: 417 S-------DTEMQLEFVQHKRDYYMNKMEYANVD--AETMRSQAEGYIRAIQWNLHYYYN 467
Query: 478 GVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRK 537
G CSW W+YP+HYAPF SD+K+ + F+LG PFKPF QLL V P+AS LP Y
Sbjct: 468 GCCSWSWYYPHHYAPFISDIKNFKDLKLEFDLGEPFKPFEQLLAVLPAASKSLLPTAYHG 527
Query: 538 LMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARR 597
LMT+ SPI +YP DF+ D+NGK+ W+ + +P IDE LL +K LT EE +R
Sbjct: 528 LMTEEKSPIIKYYPLDFKTDLNGKKQEWEAVVLIPLIDEKSLLKAMKPCNAKLTPEERKR 587
Query: 598 NS 599
NS
Sbjct: 588 NS 589
>gi|345479163|ref|XP_003423891.1| PREDICTED: 5'-3' exoribonuclease 1-like isoform 2 [Nasonia
vitripennis]
Length = 1682
Score = 360 bits (924), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 213/602 (35%), Positives = 299/602 (49%), Gaps = 109/602 (18%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
+NQQR RRFRA+K+A A+ QE +E R FDSN ITPGT FM+ L
Sbjct: 94 INQQRGRRFRAAKEAEVLEAKARAKGQEIPKEAR----------FDSNCITPGTVFMSKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+I +++ D W+K K+ILS + VPGEGEHKIM Y+R + P Y+ NTRHCLY
Sbjct: 144 NEQLKYFITYKISTDKLWQKCKIILSGSEVPGEGEHKIMDYIRYMKAQPDYEGNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V +F +
Sbjct: 204 GLDADLIMLGLCSHEPHFSLLREEV-------------------------------KFGK 232
Query: 181 KGDEVVVPKKP-YQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDF 237
+++ P++ + LH+ +REYL++EF F+ D+E I+DD++ M F VGNDF
Sbjct: 233 TQKKILTPEETNFCLLHLSLMREYLEHEFSPVKDKLTFKFDIEKIIDDWVLMGFLVGNDF 292
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I GA+ LL Y L GY+ + +L R E F++ +G Y+ F
Sbjct: 293 IPHLPNLHIENGALPLLYNAYMDVLPTLDGYINEAGTLNLERFEKFMEKLGKYDLEQFD- 351
Query: 298 RARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECV 357
+ +A+ E RR ++ E ++
Sbjct: 352 -----EIYADLKFFEAKTGRRLNESERNSK------------------------------ 376
Query: 358 GRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSD 417
N + P K + + A I+ EN D E+ L +SD
Sbjct: 377 ----NSPDENASPKK-----TNKALNALIMATENELGADSDED-----------LEGESD 416
Query: 418 AFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYE 477
+ + +++L K YY K + ET + Y + W +HYYY
Sbjct: 417 S-------DTEMQLEFVQHKRDYYMNKMEYANVD--AETMRSQAEGYIRAIQWNLHYYYN 467
Query: 478 GVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRK 537
G CSW W+YP+HYAPF SD+K+ + F+LG PFKPF QLL V P+AS LP Y
Sbjct: 468 GCCSWSWYYPHHYAPFISDIKNFKDLKLEFDLGEPFKPFEQLLAVLPAASKSLLPTAYHG 527
Query: 538 LMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARR 597
LMT+ SPI +YP DF+ D+NGK+ W+ + +P IDE LL +K LT EE +R
Sbjct: 528 LMTEEKSPIIKYYPLDFKTDLNGKKQEWEAVVLIPLIDEKSLLKAMKPCNAKLTPEERKR 587
Query: 598 NS 599
NS
Sbjct: 588 NS 589
>gi|225684905|gb|EEH23189.1| 5'-3' exoribonuclease [Paracoccidioides brasiliensis Pb03]
Length = 1445
Score = 360 bits (924), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 232/639 (36%), Positives = 339/639 (53%), Gaps = 76/639 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA A+E+ ++Q G ++P ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRARRFRTAYDA--EVAKEKAIKQ-----GIEMPKEA---AFDSNCITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+I+ +++ D W+ ++++LS VPGEGEHKIM Y+R + PGY P+ RHCLY
Sbjct: 144 TQQLKYFINKKVSEDVEWQGVEIVLSGHEVPGEGEHKIMEYIRQTKAQPGYHPDVRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+Q +++K+ E +
Sbjct: 204 GLDADLIMLGLLSHDPHFCLLREEV-TFGRQ-------------------SQKKSKELEH 243
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGND 236
+ + +H+ +REYL+ EF+ F DLE I+DDFI M FFVGND
Sbjct: 244 QN---------FYLMHLCMVREYLELEFQELEEEDALQFPFDLERIIDDFILMAFFVGND 294
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP++P L I EGA+ + +YK+ LGGY+ + +L R+ + ++ E R F+
Sbjct: 295 FLPNLPNLHINEGALAWMFKIYKQVLPKLGGYINEQGTINLERLGILLDSLSDVEFRFFE 354
Query: 297 KRARLHQRHAERIKREKAQARRGDDVEP--LAQPDSLVPVSRFHGSRLASGPSPSPYQQS 354
+ +IK ++ RG+ EP +++ ++ P + +R+ S P
Sbjct: 355 AEYSDARWIKSKIK--CGESERGNP-EPSQISKEFTISPAQKQIFNRIKKYVSHHPVNDQ 411
Query: 355 ECVGRLDNGKGTSGRPHK-VPRLSSGATIGAAIVEAE--NSFETDPQENKEE-------- 403
LD R K V +L+ + V E + F +KE+
Sbjct: 412 GKPVPLDLSSNLPARDRKFVEQLADDLHLQWTTVSNEHGDRFLRVQLPSKEDPANGNSGE 471
Query: 404 --------FKAKLKELLRDKSDAFNSDNPEEDKVKLGEPG-------WKERYYEEKFNAK 448
+ L ++R +A + E+ + E WK YY+ KF
Sbjct: 472 DDDENEEEGQIALLRVMRRYENAKVKETTAEEAQQAAEKKYERKFQEWKNNYYKSKFRWG 531
Query: 449 TPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFE 508
+ EE RK + Y +GL WV++YYY GV SW WFY YHY+P SD+K + +++F+
Sbjct: 532 M-DNHEEMRK-LTENYVQGLQWVLYYYYRGVASWPWFYQYHYSPMISDVKLGLKADMNFD 589
Query: 509 LGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGI 568
LG PF PF QL+GV P S +P + +LMT P SPI DFYP DFE+DMNGK+ W+ +
Sbjct: 590 LGQPFHPFQQLMGVLPDRSKQIVPAAFHELMTSPESPIIDFYPRDFELDMNGKKMDWEAV 649
Query: 569 AKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
K+PFI+E RLL + EH LT EE RN + F
Sbjct: 650 VKIPFIEEKRLLKAMATKEHLLTPEEKARNEFGVTLKFT 688
>gi|427788379|gb|JAA59641.1| Putative 5'-3' exonuclease hke1/rat1 [Rhipicephalus pulchellus]
Length = 1628
Score = 360 bits (924), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 220/615 (35%), Positives = 315/615 (51%), Gaps = 111/615 (18%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRF+++K+A A+E+ R G LP + FDSN I+PGTEFMA L
Sbjct: 21 MNQQRGRRFKSAKEAQ---AQEKEARDR----GEVLP---TEERFDSNCISPGTEFMARL 70
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
LQ ++ +++ DP W +KV LS PGEGEHK+M ++R +R+ PGYDPNTRHCLY
Sbjct: 71 QDQLQQFVATKVSTDPLWRGVKVYLSGHQTPGEGEHKVMDFIRTERSQPGYDPNTRHCLY 130
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML + +HE HF++LRE + +Q++ KR
Sbjct: 131 GLDADLIMLGMCSHEPHFALLREEIVYGKRQNQ------------------KR------- 165
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDF 237
+ VP++ + LH+ LREYL+ EF+ PFE ++ I+DD++ MCF VGNDF
Sbjct: 166 ----LNVPEEITFHLLHLSLLREYLELEFQELKKTIPFEFKMDNIIDDWVLMCFLVGNDF 221
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
LPH+P L I A+ +L Y +LGGY+ + K +L R E F+
Sbjct: 222 LPHLPNLHIAHNALPVLYQAYIDVMPSLGGYINEYGKLNLERFEKFL------------- 268
Query: 298 RARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECV 357
RL Q E+ +A +F S+ A +P+ Q
Sbjct: 269 -TRLSQFDYEKFTDVQAD-------------------QKFLASKRAYAEAPNGIVQ---- 304
Query: 358 GRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSD 417
NG SG+ E + + D + E+F D D
Sbjct: 305 ---QNGSPPSGK--------------------EKTKDPDEKRLLEKFSH------LDIPD 335
Query: 418 AFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYE 477
F+SD +E +++ K YY K + + +E ++ Y + W +HYYY
Sbjct: 336 -FDSDEDQEGLLEMEFRQHKRDYYVNKL--EYADVNKEVMQEQAHGYVRAIQWNLHYYYN 392
Query: 478 GVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRK 537
GV SW W+YP+HY+P+ SD+KD +++FELG PF PF QL+ + PSAS +P Y+
Sbjct: 393 GVQSWNWYYPHHYSPYISDIKDFQNLDMTFELGKPFLPFQQLMAILPSASKKLVPSAYQD 452
Query: 538 LMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARR 597
LM + SPI D+YP DF D+NGK++ W+ + +PFI+E RLL +++ LTEEE R
Sbjct: 453 LMENEESPILDYYPKDFNTDLNGKQHDWEAVVLIPFIEEGRLLPAMEERFEKLTEEEKSR 512
Query: 598 NSIMADMLFVLLSHP 612
N +LFV P
Sbjct: 513 NGHSGHLLFVYSEEP 527
>gi|327353279|gb|EGE82136.1| exonuclease [Ajellomyces dermatitidis ATCC 18188]
Length = 1440
Score = 359 bits (922), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 232/638 (36%), Positives = 333/638 (52%), Gaps = 76/638 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA A+E+ ++Q E PK ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRARRFRTALDA--EVAKEKAIKQGIEM------PKEEA--FDSNCITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+I+ +++ D W+ ++++LS VPGEGEHKIM Y+R + PGY P+ RHCLY
Sbjct: 144 TQQLKYFINKKVSEDVEWQGVEIVLSGHEVPGEGEHKIMEYIRQSKAQPGYHPDVRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+Q +++K+ E +
Sbjct: 204 GLDADLIMLGLLSHDPHFCLLREEV-TFGRQ-------------------SQKKSKELEH 243
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGND 236
+ + +H+ +REYL+ EF+ F DLE ++DDFI M FFVGND
Sbjct: 244 QN---------FYLMHLCMVREYLELEFQELEEADALQFPFDLERVIDDFILMAFFVGND 294
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP++P L I EGA+ + +YK+ LGGY+ + +L R+ + ++ E R F+
Sbjct: 295 FLPNLPNLHINEGALAWMFKIYKQVLPKLGGYINEQGTINLERLGVLLDSLSDVEFRFFE 354
Query: 297 KRARLHQRHAERIK-REKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSE 355
A IK + K Q + A+ ++ P + +R+ + P
Sbjct: 355 A----EYSDARWIKSKMKGQEPENSESPANAKDFTISPAQKHIFNRIKKYVTHRPVNDEG 410
Query: 356 CVGRLDNGKGTSGRPHK-VPRLSSGATIGAAIVEAEN----------SFETDPQENKEEF 404
LD R K V +L+ + V E+ S ET + +
Sbjct: 411 QPIPLDLSSSLPARDRKFVEQLADDLHLAWTTVSNEHGDRFLRVQLPSKETQSSGSSGDE 470
Query: 405 K---------AKLKELLRDKSDAFNSDNPEE------DKVKLGEPGWKERYYEEKFNAKT 449
A L+ + R ++ EE K +L WK YY+ KF
Sbjct: 471 DDGDDEEGQIALLRVMKRYENAKVKETTAEEAQQAAEKKYELKFQEWKNDYYKSKFGWGL 530
Query: 450 PEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFEL 509
+ EE RK + Y +GL WV++YYY GV SW WFY YHY+P SD+K + +++F+L
Sbjct: 531 -DNHEEMRK-LTENYVQGLQWVLYYYYRGVASWPWFYQYHYSPMISDVKFGLKADMNFDL 588
Query: 510 GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIA 569
G PF+PF QL+GV P S +P + +LMT P SPI DFYP DFE+DMNGK+ W+ +
Sbjct: 589 GQPFRPFEQLMGVLPDRSKQIVPAAFHELMTSPESPIIDFYPRDFELDMNGKKMEWEAVV 648
Query: 570 KLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
K+PFIDE RLL + +H LT E RN + F
Sbjct: 649 KIPFIDEKRLLGAMATKQHLLTPAERARNEFGVTLKFT 686
>gi|261202580|ref|XP_002628504.1| exonuclease Kem1 [Ajellomyces dermatitidis SLH14081]
gi|239590601|gb|EEQ73182.1| exonuclease Kem1 [Ajellomyces dermatitidis SLH14081]
Length = 1440
Score = 359 bits (922), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 232/638 (36%), Positives = 333/638 (52%), Gaps = 76/638 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA A+E+ ++Q E PK ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRARRFRTALDA--EVAKEKAIKQGIEM------PKEEA--FDSNCITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+I+ +++ D W+ ++++LS VPGEGEHKIM Y+R + PGY P+ RHCLY
Sbjct: 144 TQQLKYFINKKVSEDVEWQGVEIVLSGHEVPGEGEHKIMEYIRQSKAQPGYHPDVRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+Q +++K+ E +
Sbjct: 204 GLDADLIMLGLLSHDPHFCLLREEV-TFGRQ-------------------SQKKSKELEH 243
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGND 236
+ + +H+ +REYL+ EF+ F DLE ++DDFI M FFVGND
Sbjct: 244 QN---------FYLMHLCMVREYLELEFQELEEADALQFPFDLERVIDDFILMAFFVGND 294
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP++P L I EGA+ + +YK+ LGGY+ + +L R+ + ++ E R F+
Sbjct: 295 FLPNLPNLHINEGALAWMFKIYKQVLPKLGGYINEQGTINLERLGVLLDSLSDVEFRFFE 354
Query: 297 KRARLHQRHAERIK-REKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSE 355
A IK + K Q + A+ ++ P + +R+ + P
Sbjct: 355 A----EYSDARWIKSKMKGQEPENSESPANAKDFTISPAQKHIFNRIKKYVTHRPVNDEG 410
Query: 356 CVGRLDNGKGTSGRPHK-VPRLSSGATIGAAIVEAEN----------SFETDPQENKEEF 404
LD R K V +L+ + V E+ S ET + +
Sbjct: 411 QPIPLDLSSSLPARDRKFVEQLADDLHLAWTTVSNEHGDRFLRVQLPSKETQSSGSSGDE 470
Query: 405 K---------AKLKELLRDKSDAFNSDNPEE------DKVKLGEPGWKERYYEEKFNAKT 449
A L+ + R ++ EE K +L WK YY+ KF
Sbjct: 471 DDGDDEEGQIALLRVMKRYENAKVKETTAEEAQQAAEKKYELKFQEWKNDYYKSKFGWGL 530
Query: 450 PEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFEL 509
+ EE RK + Y +GL WV++YYY GV SW WFY YHY+P SD+K + +++F+L
Sbjct: 531 -DNHEEMRK-LTENYVQGLQWVLYYYYRGVASWPWFYQYHYSPMISDVKFGLKADMNFDL 588
Query: 510 GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIA 569
G PF+PF QL+GV P S +P + +LMT P SPI DFYP DFE+DMNGK+ W+ +
Sbjct: 589 GQPFRPFEQLMGVLPDRSKQIVPAAFHELMTSPESPIIDFYPRDFELDMNGKKMEWEAVV 648
Query: 570 KLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
K+PFIDE RLL + +H LT E RN + F
Sbjct: 649 KIPFIDEKRLLGAMATKQHLLTPAERARNEFGVTLKFT 686
>gi|62321273|dbj|BAD94484.1| hypothetical protein [Arabidopsis thaliana]
Length = 447
Score = 359 bits (921), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 167/291 (57%), Positives = 210/291 (72%), Gaps = 7/291 (2%)
Query: 472 MHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHAL 531
MHYYY GVCSW WFYPYHYAPFASDLK L++ +I FELG PFKPFNQLL V PSAS+HAL
Sbjct: 1 MHYYYHGVCSWNWFYPYHYAPFASDLKGLEKLDIKFELGSPFKPFNQLLAVLPSASAHAL 60
Query: 532 PEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLT 591
PE YR LMT+P+SPI+DFYP DFE+DMNGKRYSWQGI+KLPF++E RLL+ ++E +LT
Sbjct: 61 PECYRSLMTNPDSPIADFYPADFEIDMNGKRYSWQGISKLPFVEEKRLLEAAAQVEKSLT 120
Query: 592 EEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI 651
EE RRNS + DMLFV+ SHPL I +L+ L +ER + E+++P LSDGMNGYI
Sbjct: 121 NEEIRRNSALFDMLFVVASHPLGELIRSLNSRTNNLSNEERATIIEKIDPGLSDGMNGYI 180
Query: 652 SPCAGDPHPPVFRSPVASMEDIMGNQVLCAIYKLPDAHK--HVTRPPAGVIFPKKIVQLE 709
+ C GD P F S V MED++ NQV+CA YKLP+ + +T + PKK + L
Sbjct: 181 ASCGGDSQPSCFCSTVEGMEDVLTNQVICATYKLPEDIRGSEITHQIPRLAIPKKTISLV 240
Query: 710 DLKPAPVLWHEDSGRRPH-----ENGRHNPHGTISGRQLGEAAHRLVANSL 755
DLK +LWHED +R + R+NP G+ISG +LG+A+HRLV ++
Sbjct: 241 DLKSGGLLWHEDGDKRRAPPKVIKIKRYNPEGSISGGRLGKASHRLVLQTI 291
>gi|427780147|gb|JAA55525.1| Putative 5'-3' exonuclease hke1/rat1 [Rhipicephalus pulchellus]
Length = 1163
Score = 357 bits (917), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 221/615 (35%), Positives = 314/615 (51%), Gaps = 111/615 (18%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRF+++K+A A+E+ R G LP + + FDSN I+PGTEFMA L
Sbjct: 21 MNQQRGRRFKSAKEAQ---AQEKEARDR----GEVLPTE---ERFDSNCISPGTEFMARL 70
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
LQ ++ +++ DP W +KV LS PGEGEHK+M ++R +R+ PGYDPNTRHCLY
Sbjct: 71 QDQLQQFVATKVSTDPLWRGVKVYLSGHQTPGEGEHKVMDFIRTERSQPGYDPNTRHCLY 130
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML + +HE HF++LRE + +Q++ KR
Sbjct: 131 GLDADLIMLGMCSHEPHFALLREEIVYGKRQNQ------------------KR------- 165
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDF 237
+ VP++ + LH+ LREYL+ EF+ PFE ++ I+DD++ MCF VGNDF
Sbjct: 166 ----LNVPEEITFHLLHLSLLREYLELEFQELKKTIPFEFKMDNIIDDWVLMCFLVGNDF 221
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
LPH+P L I A+ +L Y +LGGY+ + K +L R E F+
Sbjct: 222 LPHLPNLHIAHNALPVLYQAYIDVMPSLGGYINEYGKLNLERFEKFL------------- 268
Query: 298 RARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECV 357
RL Q E+ +A +F S+ A +P+ Q
Sbjct: 269 -TRLSQFDYEKFTDVQAD-------------------QKFLASKRAYAEAPNGIVQQ--- 305
Query: 358 GRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSD 417
NG SG+ DP E + K L D D
Sbjct: 306 ----NGSPPSGKEKT----------------------KDPDEKR--LLEKFSHL--DIPD 335
Query: 418 AFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYE 477
F+SD +E +++ K YY K + + +E ++ Y + W +HYYY
Sbjct: 336 -FDSDEDQEGLLEMEFRQHKRDYYVNKL--EYADVNKEVMQEQAHGYVRAIQWNLHYYYN 392
Query: 478 GVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRK 537
GV SW W+YP+HY+P+ SD+KD +++FELG PF PF QL+ + PSAS +P Y+
Sbjct: 393 GVQSWNWYYPHHYSPYISDIKDFQNLDMTFELGKPFLPFQQLMAILPSASKKLVPSAYQD 452
Query: 538 LMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARR 597
LM + SPI D+YP DF D+NGK++ W+ + +PFI+E RLL +++ LTEEE R
Sbjct: 453 LMENEESPILDYYPKDFNTDLNGKQHDWEAVVLIPFIEEGRLLPAMEERFEKLTEEEKSR 512
Query: 598 NSIMADMLFVLLSHP 612
N +LFV P
Sbjct: 513 NGHSGHLLFVYSKEP 527
>gi|171694057|ref|XP_001911953.1| hypothetical protein [Podospora anserina S mat+]
gi|170946977|emb|CAP73781.1| unnamed protein product [Podospora anserina S mat+]
Length = 1419
Score = 357 bits (916), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 224/635 (35%), Positives = 332/635 (52%), Gaps = 80/635 (12%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA ER R + +EG++LP + FDSN ITPG +
Sbjct: 93 MNQQRARRFRTALDA-------ERARDKAIQEGKELPKEPP---FDSNCITPGMLLPPDV 142
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+L+Y+I+ +++ D W+ +++LS VPGEGEHKIM Y+R R P Y+PN RHCLY
Sbjct: 143 WFSLKYFINKKVSEDKDWQGPEIVLSGHEVPGEGEHKIMEYIRNARAQPDYNPNVRHCLY 202
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V Q G + K + K E +
Sbjct: 203 GLDADLIMLGLLSHDPHFCLLREEV-------------QFGRV------KDQHKVKELEH 243
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEF---RIPNP-PFEIDLECIVDDFIFMCFFVGND 236
+ + +H+ +REYL+ EF ++P P D+E ++DDFI M FFVGND
Sbjct: 244 QN---------FYLMHLCIVREYLELEFQELKVPGAIPMPFDMEKVIDDFILMAFFVGND 294
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP++P I EGA+ + +YK+ R GY+ + + +L+R+ ++ +G E R F+
Sbjct: 295 FLPNLPRFHINEGALATMFKIYKEVLRKCDGYINENGRVNLKRLAILLEELGREEYRFFE 354
Query: 297 KRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQ--- 353
+ E A RG + L ++ + +R G + S + ++
Sbjct: 355 H------------ENEDAGWLRGKKM--LEHDEAEIARARVKGKLIISSDQKTLWKTKIR 400
Query: 354 ----SECVGRLDNGKGTSGRPHK-VPRLSSGATIGAAIVEAEN-------SFETDPQENK 401
+ LD G G + K V L+ A I A E ++ +F E++
Sbjct: 401 KFLTNRNSQTLDLGTGLNAADRKFVQDLADAAHIEWATKEDDDGRRHLILTFPVRDDEDE 460
Query: 402 EEFKAKLKEL-LRDKSDAF--------NSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEE 452
E+ +A+ L + K D+ ++ + E K K WK+ YY++KF +
Sbjct: 461 EDEEAQSASLRIVKKYDSAQVLDLTGADAQSAMEAKYKQKFQEWKDGYYKDKFPEWAEGK 520
Query: 453 REETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHP 512
E+ + + Y +GL WV+ YYY G+ SW WFY YHY+P SD+ +++F LG P
Sbjct: 521 HEDELRKLAENYVQGLQWVLFYYYRGIASWPWFYRYHYSPLVSDVVKGLGADLNFTLGQP 580
Query: 513 FKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLP 572
F+P QL+GV P S +P Y LMTD +SPI DFYP DFE+DMNGK+ W+ + K+P
Sbjct: 581 FRPNEQLMGVLPDRSKSIVPTVYWPLMTDKDSPIIDFYPRDFELDMNGKKMDWEAVVKIP 640
Query: 573 FIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
FIDE RLLD + L++EE RN + F
Sbjct: 641 FIDEKRLLDAMAPKNDLLSDEEKARNDFGVALKFT 675
>gi|291220730|ref|XP_002730377.1| PREDICTED: rCG25308-like [Saccoglossus kowalevskii]
Length = 2104
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 212/641 (33%), Positives = 320/641 (49%), Gaps = 97/641 (15%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR+++ AAEE+ ++ +G LP + + FDSN ITPGTEFM L
Sbjct: 94 MNQQRGRRFRSAR-----AAEEQE--KKALSKGETLPTE---KRFDSNCITPGTEFMVKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+++ ++ D W +++ LS PGEGEHK+M ++R ++ P YDPNTRHCLY
Sbjct: 144 NEQLKYFVNKKITEDEMWRGLRIYLSGHETPGEGEHKVMEFIRAEKADPKYDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADL+ML L +HE HFS+LRE V F +
Sbjct: 204 GLDADLMMLGLTSHEPHFSLLREEV-------------------------------RFGK 232
Query: 181 KGDEVVVP---KKPYQFLHIWTLREYLDYEFRIPN--PPFEIDLECIVDDFIFMCFFVGN 235
K + P + + LH+ REYL++EF+ F+ DLE I+DD++ M F VGN
Sbjct: 233 KSQQKRTPTPEETTFHLLHLSLFREYLEFEFQDVKGKISFDYDLERIIDDWVLMGFLVGN 292
Query: 236 DFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 295
DF+PH+P L I A+ LL Y + + GYL + +L+R E +++ + ++ F
Sbjct: 293 DFIPHLPDLHINHDALPLLYKTYIEVLPLVDGYLNEDGILNLKRFEVYLKKLSEFDRNKF 352
Query: 296 QKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSE 355
+ + V + F G + ++
Sbjct: 353 SETS--------------------------------VDLKYFEGKKGSTE---------- 370
Query: 356 CVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDK 415
G G+ R K L + + A + S + +++ + E L D+
Sbjct: 371 --GSAWKGQRIKKREEKKEALRAAKNLAQASMFQVLSTTEESEDSSDNGNKNSVETLFDE 428
Query: 416 SDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYY 475
++D E + ++ K YY+ K + EE KD L Y G+ W++HYY
Sbjct: 429 ETKLDADVDEAEIFEMEFRQHKRNYYQTKLGYEN--VTEEVLKDQALCYVTGIQWILHYY 486
Query: 476 YEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHY 535
Y GV SW W+YP+HYAPF SD+ + +++G PFKPF QLL V P+AS LP+ +
Sbjct: 487 YNGVQSWGWYYPHHYAPFMSDVCGFSDCELKYDIGRPFKPFEQLLAVLPAASGELLPKPF 546
Query: 536 RKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEA 595
+ LM NSPI ++YP DF+ D+NGK+ W+ + +PFIDE LLD + + + LT+EE
Sbjct: 547 QSLMIMDNSPIIEYYPVDFDTDLNGKQQDWEAVVLIPFIDEKCLLDAMAPLNNILTDEEK 606
Query: 596 RRNSIMADMLF-----VLLSHPLSASIYTLDEHCKQLKIKE 631
RRNS +L+ + +P S D +C K +E
Sbjct: 607 RRNSHGPHLLYTYDKELSFCYPSSLPGVFTDINCSHAKCEE 647
>gi|400601005|gb|EJP68673.1| XRN 5'-3' exonuclease [Beauveria bassiana ARSEF 2860]
Length = 1398
Score = 356 bits (914), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 222/634 (35%), Positives = 322/634 (50%), Gaps = 69/634 (10%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR +A E E+ R++ +EG ++P + + FDSN ITPGTEFMA L
Sbjct: 95 MNQQRARRFR-------TALEVEKAREKAIKEGVEMPKE---EPFDSNCITPGTEFMAKL 144
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S LQY+++ +++ D W+ +++LS VPGEGEHKIM Y+R ++ PGY+ N RHCLY
Sbjct: 145 SRQLQYFVNKKVSEDTDWQGCEIVLSGHEVPGEGEHKIMEYIRNAKSQPGYNSNVRHCLY 204
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HFS+LRE V T G+ +K K+ E +
Sbjct: 205 GLDADLIMLGLLSHDPHFSLLREEV-TFGR-------------------ASKNKSKELEH 244
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFR----IPNPPFEIDLECIVDDFIFMCFFVGND 236
+ + LH+ +REYL+ EF+ + FE DLE ++DDFI M FFVGND
Sbjct: 245 QN---------FFLLHLCMVREYLEMEFQELKHQQDLGFEFDLERVIDDFILMAFFVGND 295
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP++P L I EGA+ + +YK+ GGYL + +++R I + E + F+
Sbjct: 296 FLPNLPGLHINEGALADMFEIYKRVLPEEGGYLHENGVLNIKRALRMIAELSKVELKQFE 355
Query: 297 KRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSEC 356
+ A + +K Q ++ + + R PY
Sbjct: 356 HDIADEKWFASKQMEKKLQNTTAASKAKTSKSGQRIITTT---QRDLWKQKIRPYVSKRS 412
Query: 357 VGRLDNGKGTSGRPHKVPR-LSSGATIGAAIVEAENSFE---------------TDPQEN 400
LD G S K + ++ + + E +N F D +
Sbjct: 413 NDALDLGVELSAADKKFAQEIADAMHLDWSTKEDDNGFRHLIISYPPKSAGDHHDDEEGE 472
Query: 401 KEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERY-------YEEKFNAKTPEER 453
+EE ++R A ++ E + E ++E+Y Y +KF
Sbjct: 473 EEEGNLAAYRVIRTYDKAVVVNDSSEASQEEYEKLYQEKYQAWKTKYYLQKFPEWESTAY 532
Query: 454 EETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPF 513
E + ++ Y EGL WV+ YYY G+ SW WFY YHYAP SD+ + FE G PF
Sbjct: 533 AEEQTNLCENYVEGLQWVLFYYYRGIASWPWFYKYHYAPLISDVVKGSNAKLVFEKGQPF 592
Query: 514 KPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPF 573
KP+ QL+GV P S +P Y LMT+ +SPI DFYP DFE+DMNGK+ W+ + K+PF
Sbjct: 593 KPYEQLMGVLPDRSKKIVPTAYHDLMTNSSSPIIDFYPRDFELDMNGKKMDWEAVVKIPF 652
Query: 574 IDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
IDE RLL ++ L+++E RN + F
Sbjct: 653 IDEKRLLAAMETKNALLSDDEKSRNGFGVPLKFT 686
>gi|194892948|ref|XP_001977773.1| GG18055 [Drosophila erecta]
gi|190649422|gb|EDV46700.1| GG18055 [Drosophila erecta]
Length = 1583
Score = 356 bits (914), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 207/602 (34%), Positives = 302/602 (50%), Gaps = 126/602 (20%)
Query: 1 MNQQRSRRFRASKDA--ADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMA 58
MNQQRSRRFR++++A ++ A + R+E ER FDSN ITPGTEFM
Sbjct: 94 MNQQRSRRFRSAREAEQLEAKAAQRGERREHER-------------FDSNCITPGTEFMV 140
Query: 59 VLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHC 118
L L+ ++ +++ DP W++ VILS PGEGEHKIM Y+R + P +DPNTRHC
Sbjct: 141 RLQEGLRAFLKTKISTDPLWQQCSVILSGQETPGEGEHKIMDYIRYMKAQPDFDPNTRHC 200
Query: 119 LYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEF 178
LYGLDADLI+L L THE+HF +LRE V +F
Sbjct: 201 LYGLDADLIILGLCTHELHFVVLREEV-------------------------------KF 229
Query: 179 DEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPP-FEIDLECIVDDFIFMCFFVGNDF 237
V + + LH+ LREYL+ EF N ++D+ ++DD++ M F VGNDF
Sbjct: 230 GRNVKRTSVEETRFFLLHLGLLREYLELEFDALNTAERKLDVSQLIDDWVLMGFMVGNDF 289
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P + I A+ LL Y + LGG + + K +LRR++ F+ A+ E +F++
Sbjct: 290 IPHLPCMHISSNALPLLYRTYISIYPTLGGNINENGKLNLRRLQIFLSALAEVELELFKE 349
Query: 298 RARLHQRHAERIKREKAQARRGD-DVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSEC 356
HA+ +K A+ D DV + + +
Sbjct: 350 -------HADDLKYMNAKTEAFDVDVAEITESQDI------------------------- 377
Query: 357 VGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKS 416
+ +GA I E+ +E +E+ + +A L L++
Sbjct: 378 ----------------------DSDLGALISESMKLYEDGSEEDWSDEEAVLMNELKN-- 413
Query: 417 DAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYY 476
+K YY KFN + + + +++ Y L WV+ YYY
Sbjct: 414 -------------------YKRNYYRNKFNR---DPQSDLLEELGHHYVNALQWVLDYYY 451
Query: 477 EGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYR 536
GV SW W+YP+HYAPF SDL++++Q I F++G PF PF QLL V P+AS LP Y
Sbjct: 452 RGVQSWDWYYPFHYAPFISDLRNIEQVQIDFQMGTPFLPFQQLLAVLPTASCKLLPAAYH 511
Query: 537 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 596
LM P+SP+++FYP +FE D+NGK++ W+ + +PFIDE RLL + E L+ E
Sbjct: 512 DLMVLPSSPLAEFYPLEFESDLNGKKHDWEAVVLIPFIDEGRLLAAMLPCEEQLSLAERE 571
Query: 597 RN 598
RN
Sbjct: 572 RN 573
>gi|190345127|gb|EDK36952.2| hypothetical protein PGUG_01050 [Meyerozyma guilliermondii ATCC
6260]
Length = 1378
Score = 356 bits (914), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 235/653 (35%), Positives = 342/653 (52%), Gaps = 103/653 (15%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + +A EE L++ +G ++P K D FDSN ITPGTEFMA L
Sbjct: 58 MNQQRARRFRTAYEA------EENLKKAIS-QGLEIP-KDDP--FDSNAITPGTEFMAKL 107
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+IH +++ D W + +ILS VPGEGEHKIM+Y+R ++ P Y+ N+RHC+Y
Sbjct: 108 TENLKYFIHKKISTDSRWAETVIILSGHEVPGEGEHKIMNYIRTMKSQPNYNSNSRHCIY 167
Query: 121 GLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEF- 178
GLDADLIML L +H+ HF +LRE V F P ++ K+ +
Sbjct: 168 GLDADLIMLGLVSHDPHFCLLREEVTFGP---------------------RSGNKSNDLH 206
Query: 179 DEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPN--PPFEIDLECIVDDFIFMCFFVGND 236
D+K + LHI LREY+ EF+ + FE D E ++DD I + + +GND
Sbjct: 207 DQK----------FFLLHISLLREYISLEFQDMDNDVSFEFDFERVLDDLILIMYVIGND 256
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP +P L I +GA LL+ +K+ GY+ + +L+R+ +++ + +E F+
Sbjct: 257 FLPSLPDLYINKGAFPLLLETFKQALAESDGYINENGTINLKRLAIWLRHLSEFELENFE 316
Query: 297 K--------RARLHQ------RHAERIKRE---KAQARRGDDVEPLAQPDSLVPVSRFHG 339
K RL + ER+ + K Q + ++P S + V+
Sbjct: 317 KSNVDVDWFNQRLEDISITGGKRRERMGKLLILKDQKKLVGMIKPWLMEYSTMKVADLVQ 376
Query: 340 SRLASGPSPSPYQQSECVGR-LDNGKGTSGRPHKVPRLSSGATIGAAIVEA------ENS 392
G PS +E V + LD K +G IV + E
Sbjct: 377 LE-GEGKLPSLSLPAEEVSKHLDFIK------------QFALEVGLIIVHSRSKDTYEAK 423
Query: 393 FETD---PQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEP---------GWKERY 440
+ D P E EE + ++ E+ R + S N E + L E WK++Y
Sbjct: 424 LDIDGMSPYETDEEHEDRINEI-RKSVKKYQSANLFETEDLLKESRDIYDAKFMKWKDQY 482
Query: 441 YEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASD---- 496
Y+EKF ++ E ++ Y EGL WV++YYY+G SW W+Y YHYAP SD
Sbjct: 483 YQEKFKFSIHDKEEMV--NLTEHYIEGLQWVLYYYYQGCPSWSWYYRYHYAPRISDISIG 540
Query: 497 LKDLDQFN--ISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDF 554
L+++ + N I+FELG PFKPF QL+ V P+ S +P YR LMT+ +SPI DFYP
Sbjct: 541 LENMLENNKKITFELGTPFKPFEQLMAVLPARSRKLMPLEYRPLMTESHSPIIDFYPDKV 600
Query: 555 EVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
++DMNGK SW+ + L F+DE RL++ +K IE LT EE +RNS D+ F+
Sbjct: 601 DIDMNGKTASWEAVVLLSFVDEKRLIETLKPIEAKLTPEETKRNSFGTDIEFI 653
>gi|226294212|gb|EEH49632.1| 5'-3' exoribonuclease [Paracoccidioides brasiliensis Pb18]
Length = 1445
Score = 356 bits (913), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 231/639 (36%), Positives = 338/639 (52%), Gaps = 76/639 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA A+E+ ++Q G ++P ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRARRFRTAYDA--EVAKEKAIKQ-----GIEMPKEA---AFDSNCITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+I+ +++ D W+ ++++LS VPGEGEHKIM Y+R + PGY P+ RHCLY
Sbjct: 144 TQQLKYFINKKVSEDVEWQGVEIVLSGHEVPGEGEHKIMEYIRQTKAQPGYHPDVRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+Q +++K+ E +
Sbjct: 204 GLDADLIMLGLLSHDPHFCLLREEV-TFGRQ-------------------SQKKSKELEH 243
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGND 236
+ + +H+ +REYL+ EF+ F DLE I+DDFI M FFVGND
Sbjct: 244 QN---------FYLMHLCMVREYLELEFQELEEEDALQFPFDLERIIDDFILMAFFVGND 294
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP++P L I EGA+ + +YK+ LGGY+ + +L R+ + ++ E R F+
Sbjct: 295 FLPNLPNLHINEGALAWMFKIYKQVLPKLGGYINEQGTINLERLGILLDSLSDVEFRFFE 354
Query: 297 KRARLHQRHAERIKREKAQARRGDDVEP--LAQPDSLVPVSRFHGSRLASGPSPSPYQQS 354
+ +IK + RG+ EP +++ ++ P + +R+ S P
Sbjct: 355 AEYSDARWIKSKIK--CGELERGNP-EPSQISKEFTISPAQKQIFNRIKKYVSHHPVNDQ 411
Query: 355 ECVGRLDNGKGTSGRPHK-VPRLSSGATIGAAIVEAE--NSFETDPQENKEE-------- 403
LD R K V +L+ + V E + F +KE+
Sbjct: 412 GKPVPLDLSSNLPARDRKFVEQLADDLHLQWTTVSNEHGDRFLRVQLPSKEDPANGNSGE 471
Query: 404 --------FKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGW-------KERYYEEKFNAK 448
+ L ++R +A + E+ + E + K YY+ KF
Sbjct: 472 DDDENEEEGQIALLRVMRRYENAKVKETTAEEAQQAAEKKYERKFQEWKNNYYKSKFRWG 531
Query: 449 TPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFE 508
+ EE RK + Y +GL WV++YYY GV SW WFY YHY+P SD+K + +++F+
Sbjct: 532 M-DNHEEMRK-LTENYVQGLQWVLYYYYRGVASWPWFYQYHYSPMISDVKLGLKADMNFD 589
Query: 509 LGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGI 568
LG PF PF QL+GV P S +P + +LMT P SPI DFYP DFE+DMNGK+ W+ +
Sbjct: 590 LGQPFHPFQQLMGVLPDRSKQIVPAAFHELMTSPESPIIDFYPRDFELDMNGKKMDWEAV 649
Query: 569 AKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
K+PFI+E RLL + EH LT EE RN + F
Sbjct: 650 VKIPFIEEKRLLKAMATKEHLLTPEEKARNEFGVTLKFT 688
>gi|330916279|ref|XP_003297360.1| hypothetical protein PTT_07733 [Pyrenophora teres f. teres 0-1]
gi|311330012|gb|EFQ94550.1| hypothetical protein PTT_07733 [Pyrenophora teres f. teres 0-1]
Length = 1394
Score = 355 bits (912), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 229/629 (36%), Positives = 328/629 (52%), Gaps = 63/629 (10%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR +A + E+ R++ REG ++P + + FDSN ITPGT FMA L
Sbjct: 94 MNQQRARRFR-------TALDTEKAREKAIREGVEMPTE---EAFDSNCITPGTAFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+I+ +++ D W+ ++V+LS VPGEGEHK+M Y+R + PGYDPN RHCLY
Sbjct: 144 TQQLKYFINKKVSEDIDWQGVEVVLSGHEVPGEGEHKVMEYIRQAKAQPGYDPNRRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HFS+LRE V T G+Q + K+ E +
Sbjct: 204 GLDADLIMLGLLSHDPHFSLLREEV-TFGRQSQA-------------------KSKELEH 243
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGND 236
+ + +H+ +REYL+ EF+ P F D+E ++DDFI M FFVGND
Sbjct: 244 QN---------FYLMHLCIVREYLELEFQELEEPGALSFPFDMERVIDDFILMAFFVGND 294
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP++P L I EGA+ L+ VYK GY+ + ++ R+ + + E R F+
Sbjct: 295 FLPNLPHLHINEGALALMFNVYKTVLPKGKGYINEEGVINMERLATLLDELADIEYRHFE 354
Query: 297 KR----ARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLAS---GPSPS 349
A + + K ARRG V Q V + L GP
Sbjct: 355 SENSDAAWFKGKSLGKEDVMKKTARRGTVVMTTQQQALFAQVKSWLNDYLGKKEQGPLDF 414
Query: 350 PYQQSECVGRLDNGKGTSGR-PHKVPRLSSG---ATIGAAIVEAENSFETDPQENKEEFK 405
P + R P K + G + A E + + ++ +E K
Sbjct: 415 PVSLRAEDRKFVQELAEKLRLPWKTVQNDDGDRHIQVTAPPKLVEGDSDEEEEDTDDESK 474
Query: 406 AKLKELLRDKSDAFNSD-NPEEDKVKLGEP------GWKERYYEEKFNAKTPEEREETRK 458
+ +++ A D +PE+ + ++ + WK YY+ KF E E R
Sbjct: 475 KAIARIVQKYEQAKVVDVSPEDAQSEMQKKYDEKFEAWKNDYYKSKFEWDRSNEEELRR- 533
Query: 459 DVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQ 518
+ Y +GL WV++YYY GV SW W+Y YHY+P SD+K + +I+F+LG PFKPF Q
Sbjct: 534 -LTENYVQGLQWVLYYYYRGVASWPWYYQYHYSPMISDVKRGLKADINFKLGQPFKPFQQ 592
Query: 519 LLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEAR 578
L+GV P S +P+ Y LMT+ +SPI DFYP DF +DMNGK+ W+ + K+PFI E R
Sbjct: 593 LMGVLPDRSKSIVPKAYWPLMTNEDSPIIDFYPRDFTLDMNGKKQDWEAVVKIPFIQEDR 652
Query: 579 LLDEVKKIEHTLTEEEARRNSIMADMLFV 607
LL + E LT +E RNS + F
Sbjct: 653 LLKAMATKEQDLTPDEKARNSFGVSLKFT 681
>gi|189237444|ref|XP_974750.2| PREDICTED: similar to 5-3 exoribonuclease 1 [Tribolium castaneum]
Length = 1485
Score = 355 bits (910), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 220/606 (36%), Positives = 309/606 (50%), Gaps = 116/606 (19%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++KDA E++ E +++G KLP D + FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKDA-------EKMELEAKKKGEKLP---DVERFDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y++ +++ D W+K K+ILS PGEGEHKIM Y+R R+ PGYDPNTRHCLY
Sbjct: 144 HEQLKYFVVSKVSTDNMWKKCKIILSGHETPGEGEHKIMDYIRYIRSQPGYDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L TH+ HFS+LRE V +F +
Sbjct: 204 GLDADLIMLGLCTHDPHFSLLREEV-------------------------------KFGK 232
Query: 181 KGDEVVVPKKP-YQFLHIWTLREYLDYEFR------IPNPPFEIDLECIVDDFIFMCFFV 233
K VP++ + LH+ +REYL+ EF + + D+E I+DD+I M F V
Sbjct: 233 KAKRSNVPEEIRFYLLHLSLMREYLEMEFSPLKEALKDSDKIKFDIENIIDDWILMGFLV 292
Query: 234 GNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDR 293
GNDF+P++P L I GA+ +L Y + L GY+ + +L R E F++ + + +
Sbjct: 293 GNDFIPNLPNLHISNGALPVLYKAYIEVLPTLDGYINEAGTLNLERFEKFMKKLADVDIK 352
Query: 294 IFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQ 353
F++ + + ER KA A P S PV +G P+
Sbjct: 353 NFEE-IQDDLTYFERKTGRKATAHL---------PVSSKPVK--NGEEKKIDPA-----L 395
Query: 354 SECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLR 413
+E + D+ +S ++I + EA S++ + NK EF+ +E++R
Sbjct: 396 AELIAATDSLAVSSD------EEDFESSISSEEDEAFKSYKDEYYRNKLEFQEVTREVMR 449
Query: 414 DKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMH 473
++++ + + W YY
Sbjct: 450 EQAEGY-----------VRAIQWNLNYY-------------------------------- 466
Query: 474 YYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPE 533
Y GVCSW WFYP+HY+P+ SD+K I FELG PFKP+ QLL V P AS LPE
Sbjct: 467 --YNGVCSWSWFYPHHYSPYISDIKGFSDLKIDFELGKPFKPYEQLLAVLPPASKKLLPE 524
Query: 534 HYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEE 593
Y LMTD NS I +YP +F+ D+NGKR W+ + +PFIDE LL+ +K LT E
Sbjct: 525 CYHSLMTDDNSLIKSYYPEEFQTDLNGKRQEWEAVVLVPFIDEKNLLNAMKPCNELLTPE 584
Query: 594 EARRNS 599
EA+RN+
Sbjct: 585 EAKRNN 590
>gi|270007014|gb|EFA03462.1| hypothetical protein TcasGA2_TC013457 [Tribolium castaneum]
Length = 1531
Score = 355 bits (910), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 220/606 (36%), Positives = 309/606 (50%), Gaps = 116/606 (19%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++KDA E++ E +++G KLP D + FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKDA-------EKMELEAKKKGEKLP---DVERFDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y++ +++ D W+K K+ILS PGEGEHKIM Y+R R+ PGYDPNTRHCLY
Sbjct: 144 HEQLKYFVVSKVSTDNMWKKCKIILSGHETPGEGEHKIMDYIRYIRSQPGYDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L TH+ HFS+LRE V +F +
Sbjct: 204 GLDADLIMLGLCTHDPHFSLLREEV-------------------------------KFGK 232
Query: 181 KGDEVVVPKKP-YQFLHIWTLREYLDYEFR------IPNPPFEIDLECIVDDFIFMCFFV 233
K VP++ + LH+ +REYL+ EF + + D+E I+DD+I M F V
Sbjct: 233 KAKRSNVPEEIRFYLLHLSLMREYLEMEFSPLKEALKDSDKIKFDIENIIDDWILMGFLV 292
Query: 234 GNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDR 293
GNDF+P++P L I GA+ +L Y + L GY+ + +L R E F++ + + +
Sbjct: 293 GNDFIPNLPNLHISNGALPVLYKAYIEVLPTLDGYINEAGTLNLERFEKFMKKLADVDIK 352
Query: 294 IFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQ 353
F++ + + ER KA A P S PV +G P+
Sbjct: 353 NFEE-IQDDLTYFERKTGRKATAHL---------PVSSKPVK--NGEEKKIDPA-----L 395
Query: 354 SECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLR 413
+E + D+ +S ++I + EA S++ + NK EF+ +E++R
Sbjct: 396 AELIAATDSLAVSSD------EEDFESSISSEEDEAFKSYKDEYYRNKLEFQEVTREVMR 449
Query: 414 DKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMH 473
++++ + + W YY
Sbjct: 450 EQAEGY-----------VRAIQWNLNYY-------------------------------- 466
Query: 474 YYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPE 533
Y GVCSW WFYP+HY+P+ SD+K I FELG PFKP+ QLL V P AS LPE
Sbjct: 467 --YNGVCSWSWFYPHHYSPYISDIKGFSDLKIDFELGKPFKPYEQLLAVLPPASKKLLPE 524
Query: 534 HYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEE 593
Y LMTD NS I +YP +F+ D+NGKR W+ + +PFIDE LL+ +K LT E
Sbjct: 525 CYHSLMTDDNSLIKSYYPEEFQTDLNGKRQEWEAVVLVPFIDEKNLLNAMKPCNELLTPE 584
Query: 594 EARRNS 599
EA+RN+
Sbjct: 585 EAKRNN 590
>gi|146423491|ref|XP_001487673.1| hypothetical protein PGUG_01050 [Meyerozyma guilliermondii ATCC
6260]
Length = 1378
Score = 353 bits (907), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 233/651 (35%), Positives = 339/651 (52%), Gaps = 99/651 (15%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + +A EE L++ +G ++P K D FDSN ITPGTEFMA L
Sbjct: 58 MNQQRARRFRTAYEA------EENLKKAI-LQGLEIP-KDDP--FDSNAITPGTEFMAKL 107
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+IH +++ D W + +ILS VPGEGEHKIM+Y+R ++ P Y+ N+RHC+Y
Sbjct: 108 TENLKYFIHKKISTDSRWAETVIILSGHEVPGEGEHKIMNYIRTMKSQPNYNSNSRHCIY 167
Query: 121 GLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEF- 178
GLDADLIML L +H+ HF +LRE V F P ++ K+ +
Sbjct: 168 GLDADLIMLGLVSHDPHFCLLREEVTFGP---------------------RSGNKSNDLH 206
Query: 179 DEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPN--PPFEIDLECIVDDFIFMCFFVGND 236
D+K + LHI LREY+ EF+ + FE D E ++DD I + + +GND
Sbjct: 207 DQK----------FFLLHISLLREYISLEFQDMDNDVSFEFDFERVLDDLILIMYVIGND 256
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP +P L I +GA LL+ +K+ GY+ + +L+R+ +++ + +E F+
Sbjct: 257 FLPSLPDLYINKGAFPLLLETFKQALAESDGYINENGTINLKRLAIWLRHLSEFELENFE 316
Query: 297 KRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSEC 356
K +R+ E G E + + L + G P Y +
Sbjct: 317 KLNVDVDWFNQRL--EDISITGGKRRERMGKLLILKDQKKLVG---MIKPWLMEYSTMKV 371
Query: 357 VGRLD-NGKGTSGRPHKVPRLSSGAT---------------IGAAIVEA------ENSFE 394
+ G+G K+P LS A +G IV + E +
Sbjct: 372 ADLVQLEGEG------KLPLLSLPAEEVSKHLDFIKQFALEVGLIIVHSRSKDTYEAKLD 425
Query: 395 TD---PQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEP---------GWKERYYE 442
D P E EE + ++ E+ R + S N E + L E WK++YY+
Sbjct: 426 IDGMSPYETDEEHEDRINEI-RKSVKKYQSANLFETEDLLKESRDIYDAKFMKWKDQYYQ 484
Query: 443 EKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASD----LK 498
EKF ++ E ++ Y EGL WV++YYY+G SW W+Y YHYAP SD L+
Sbjct: 485 EKFKFSIHDKEEMV--NLTEHYIEGLQWVLYYYYQGCPSWSWYYRYHYAPRISDISIGLE 542
Query: 499 DLDQFN--ISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEV 556
++ + N I+FELG PFKPF QL+ V P+ S +P YR LMT+ +SPI DFYP ++
Sbjct: 543 NMLENNKKITFELGTPFKPFEQLMAVLPARSRKLMPLEYRPLMTESHSPIIDFYPDKVDI 602
Query: 557 DMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
DMNGK SW+ + L F+DE RL++ +K IE LT EE +RNS D+ F+
Sbjct: 603 DMNGKTASWEAVVLLSFVDEKRLIETLKPIEAKLTPEETKRNSFGTDIEFI 653
>gi|452818702|gb|EME25927.1| 5'-3' exoribonuclease [Galdieria sulphuraria]
Length = 645
Score = 352 bits (904), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 217/536 (40%), Positives = 300/536 (55%), Gaps = 51/536 (9%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKS-DSQVFDSNVITPGTEFMAV 59
+NQQRSRRFRA+K+A + E R+R E++++G ++P + + FDSNVITPGT FM
Sbjct: 113 INQQRSRRFRAAKEAEEKQKELLRVRDEWKKKGLRVPEYDPNRKPFDSNVITPGTPFMTN 172
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
LS+AL+ +I R+ +DP + KI VI SD++VPGEGEHKI ++R QR GYDPNT H L
Sbjct: 173 LSVALKQFIADRVAHDPAYNKISVIYSDSSVPGEGEHKIAEFIRTQRAQEGYDPNTSHVL 232
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
YGLDADLIMLALATHE++F +LRE VF QQ + QP E + + D
Sbjct: 233 YGLDADLIMLALATHELNFYVLRERVFPSPQQSEQ--KRQPQ------EAQDSKIQDSSD 284
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIP------------NPPFEIDLECIVDDFI 227
+ + + +Q L I LRE L+ EF P + E DLE ++DDF+
Sbjct: 285 IQNAAAIGARNSFQLLSIDILRECLEAEFMEPLEIGFEMESSSRHQRLEFDLERVIDDFV 344
Query: 228 FMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAV 287
F+CFFVGNDFLPH+P+L+IREGAI+ L+ +YKK G D + RV F+ +
Sbjct: 345 FLCFFVGNDFLPHLPSLDIREGAIDYLIELYKKLVPRFGYLSDDKGEIHFGRVRLFLNEL 404
Query: 288 GSYEDRIFQKRA----RLHQRHAERI-----------------KREKAQARRGDDVEPLA 326
+ ED IFQKR + ++ AER RE + R+ +D L
Sbjct: 405 ATTEDYIFQKRKLEEEKKQKQQAERATENKQSEVQNDRTKLSRTREDYENRKAEDDANLK 464
Query: 327 QP-DSL-VPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRP--HKVPRLSSGATI 382
+ DSL V+ RL + S ++ + + + TS + + V
Sbjct: 465 ETRDSLNFAVAESLKKRLKTQDSSEQASSNKQMDVANMEQSTSEQIVLNDVDVEEEEEEE 524
Query: 383 GAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYE 442
+ + E E Q+ KE+F+ +LKE L K + ED V+LGE GWKERYYE
Sbjct: 525 EEELSQVEYMLELSDQQVKEQFEKELKERLYKKRVV----DSVEDVVRLGEQGWKERYYE 580
Query: 443 EKFN-AKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDL 497
+KF+ + E + R+++ +Y EGL WVM YYY G SW W++PYHYAPFASDL
Sbjct: 581 KKFHWSPQSETSQRKREELAYKYFEGLLWVMRYYYRGCVSWTWYFPYHYAPFASDL 636
>gi|412993039|emb|CCO16572.1| 5'-3' exoribonuclease [Bathycoccus prasinos]
Length = 1513
Score = 351 bits (900), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 231/635 (36%), Positives = 318/635 (50%), Gaps = 123/635 (19%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR++K+A ++ AE + P++ + FDSN ITPGTEFMA L
Sbjct: 59 MNQQRSRRFRSAKEAEEAKAEALAKGE----------PEAQGEPFDSNCITPGTEFMARL 108
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L++Y+ + D W +KVILS V GEGEHKIM Y+R +R P YD N HCLY
Sbjct: 109 TEHLKFYVRKKQTEDVAWRNVKVILSGHEVRGEGEHKIMEYIRWERLKPDYDANMSHCLY 168
Query: 121 GLDADLIMLALATHEVHFSILREVV-FTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADLIMLAL THE HF +LREVV F G++ GQP E
Sbjct: 169 GLDADLIMLALVTHEPHFCLLREVVKFGGGER------GQPSR--------------EIL 208
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIP---NPPFEIDLECIVDDFIFMCFFVGND 236
E+ + + L + LREYLD EF+ F D+E ++DD +F+C VGND
Sbjct: 209 ERPSD-----DGFLMLQVGLLREYLDLEFQRSVKGACGFAYDVERVIDDIVFLCMLVGND 263
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLT---DGSKPSLRRVEHFIQAVGSYEDR 293
FLP +PTL+I EGA+N L Y+ +LGGY++ G + R+E + + +E
Sbjct: 264 FLPPLPTLDIAEGALNTLFDTYRDMLPSLGGYISGDEGGGTFNAPRLEKILTRMAGFERD 323
Query: 294 IFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQ 353
+ ++RA Q E+ QA+R +
Sbjct: 324 VLEQRAMDVQEFDEK------QAKRNN--------------------------------- 344
Query: 354 SECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLR 413
NGK +G P + + A FE + + KEE K + +
Sbjct: 345 -------KNGK-RNGHPSDSESFTD--------LTAMEQFEAELLKAKEEGKPEPTMMSV 388
Query: 414 DKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEER--EETRKDVVLRYTEGLCWV 471
K +A + G +K+ YY EK K E+ +E R+ Y EGL WV
Sbjct: 389 AKRNAILEGGAD------GLQQYKDMYYREKLELKVGEKAPVDELRQ----AYFEGLNWV 438
Query: 472 MHYYYEGVCSWQWFYPYHYAPFASDL-KDLDQFNISFELGHPFKPFNQLLGVFPSASSHA 530
+ YYY GV SW W+YPYHYAP ASDL L Q + F G PF PF QL+ V P ASSH
Sbjct: 439 LRYYYRGVASWTWYYPYHYAPMASDLCAGLGQLTVKFNYGRPFYPFEQLMAVQPPASSHL 498
Query: 531 LPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKI-EHT 589
LPE +R MT+ +SP+ F+P + ++D GKR SW+G+ LPF+DE L D + + +
Sbjct: 499 LPELFRHFMTEESSPLKPFFPDEIKIDFEGKRNSWEGVVLLPFLDEKVLKDAIASVSKEK 558
Query: 590 LTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHC 624
LT+ + +RN+ P ++ DE+C
Sbjct: 559 LTDAQNKRNA------------PGECIVFERDENC 581
>gi|357624452|gb|EHJ75231.1| putative 5-3 exoribonuclease 1 [Danaus plexippus]
Length = 730
Score = 350 bits (897), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 220/601 (36%), Positives = 302/601 (50%), Gaps = 97/601 (16%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR SA E E+L + + +G LP + + FDSN ITPGT FMA L
Sbjct: 94 MNQQRGRRFR-------SAREAEKLEETAKEKGEALPTE---KRFDSNCITPGTVFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+I +++ DP W K+KVILS PGEGEHKIM Y+R R+ P YDP+TRHCLY
Sbjct: 144 HEQLKYFIKEKISTDPLWSKVKVILSGHETPGEGEHKIMDYIRWARSQPDYDPSTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML + THE HF++LRE V GK ++A +E
Sbjct: 204 GLDADLIMLGVCTHEPHFALLREEVKF---------------------GKTTQRATSPEE 242
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFL 238
+ LH+ LREYL+ EF N PF D+E I+DD++ M F VGNDF+
Sbjct: 243 TN---------FYLLHLSLLREYLEQEFISIKDNLPFPYDIENIIDDWVLMGFLVGNDFI 293
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 298
P++P + I A+ LL Y L GY+ + +L R E F+Q +
Sbjct: 294 PNLPNMHISNDALPLLYKTYMTVLPTLDGYINESGDLNLGRFEVFMQELA---------- 343
Query: 299 ARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVG 358
+I +EK Q D+ + F +G P+ ++ +
Sbjct: 344 ---------KIDKEKFQ-------------DTYADLKYFEAK---TGRRPNANERRDYKP 378
Query: 359 RLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDA 418
D+ + K + A+++A D ++ E+++ + SD
Sbjct: 379 NNDDTFNVNLDDIKANKPDDEL---QALIDATQEMFMDDMKSDEDYE--------ETSD- 426
Query: 419 FNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEG 478
EE +++ K+ YY K + + +E D Y + W + YYY G
Sbjct: 427 ------EEANMEMEFILHKKDYYMNKLDYS--KVTDEVLSDQAECYVRAIQWNLWYYYRG 478
Query: 479 VCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKL 538
SW W+YP+HYAP+ SD+KD N+ FELG PFKPF QLL V P AS H LP + L
Sbjct: 479 CPSWCWYYPHHYAPYISDIKDFGNMNMEFELGEPFKPFEQLLAVLPGASKHLLPTPFHDL 538
Query: 539 MTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
MTD +SPI +YP FE D+NGK+ W+ + LPFIDE LL + LTEEE +RN
Sbjct: 539 MTDEDSPIVHYYPVSFETDLNGKKNDWEAVVLLPFIDETNLLSAMSPCYQRLTEEELKRN 598
Query: 599 S 599
S
Sbjct: 599 S 599
>gi|238878282|gb|EEQ41920.1| 5'-3' exoribonuclease 1 [Candida albicans WO-1]
Length = 1422
Score = 350 bits (897), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 238/646 (36%), Positives = 334/646 (51%), Gaps = 102/646 (15%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + +A E L++ E G ++P K D FDSN ITPGTEFMA L
Sbjct: 12 MNQQRARRFRTAYEA------EINLKKAIEN-GEEIP-KEDP--FDSNSITPGTEFMAKL 61
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+IH ++ D W I++ILS VPGEGEHKIM Y+R R+ Y+PN RHC+Y
Sbjct: 62 TNNLKYFIHKKITEDSSWANIEIILSGHEVPGEGEHKIMEYIRSIRSQDDYNPNLRHCIY 121
Query: 121 GLDADLIMLALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADLIML L TH+ HF++LR EV F P +RK G D
Sbjct: 122 GLDADLIMLGLVTHDPHFALLREEVTFGP-----------------------QRKVGPKD 158
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFR-IPNP-PFEIDLECIVDDFIFMCFFVGNDF 237
+ + + LH+ LREYL EF+ I N FE D + I+DDFI + + +GNDF
Sbjct: 159 -------LHDQKFYLLHLSLLREYLSLEFQEIENQLNFEYDFDRILDDFILIMYVIGNDF 211
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
LP++P L I +GA LL+A +K+ GY+ + K +L R+ +I+ + +E F+K
Sbjct: 212 LPNLPDLFINKGAFPLLIAAFKQTLLESDGYINENGKINLVRLNIYIKILSKFEFENFEK 271
Query: 298 RARLHQRHAE---------RIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSP 348
H+ E I EK + R G + L + LV + AS P
Sbjct: 272 ----HEVDVEWFNKKLDDISISGEKKRQRIG-KLLILKEQKKLVGFIKPWLMEWASQPI- 325
Query: 349 SPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKL 408
+E + GK + +K + I +EA F ++ + ++AKL
Sbjct: 326 -----NEILNLDQQGKLPTLHLNKDDVEKNLEFIKEFAIEA--GFLIIHSQSNDTYEAKL 378
Query: 409 K-----------------ELLRDKSDAFNSDNPEEDKVKLGEP---------GWKERYYE 442
LR + S N E + L E WK YY+
Sbjct: 379 DIDGISPTESEEEHEERITELRKTIKQYQSANLIESEEVLNETKEVYSEKFQSWKNDYYQ 438
Query: 443 EKFNAKTPEEREETRKDVV---LRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASD--- 496
K + + EE + D++ Y EGL WV++YYY G SW W+Y YHYAP SD
Sbjct: 439 SKLHFSI--DTEEGKGDLIEMTKHYIEGLQWVLYYYYRGCPSWNWYYRYHYAPRISDISL 496
Query: 497 -LKDL--DQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTD 553
L++L ++ ++ FEL HPFKPF QL+ V P+ S +P YR LM+D SPI +FYP +
Sbjct: 497 GLEELINEKTDLKFELSHPFKPFEQLMAVLPARSKKLMPVVYRPLMSDEKSPIINFYPHE 556
Query: 554 FEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 599
++DMNGK SW+ + L F+DE +L++ +K IE LT EE +RNS
Sbjct: 557 VDIDMNGKTASWEAVVLLDFVDEKKLIEALKPIESKLTPEEKQRNS 602
>gi|308081609|ref|NP_001182843.1| uncharacterized protein LOC100501093 [Zea mays]
gi|238007642|gb|ACR34856.1| unknown [Zea mays]
Length = 435
Score = 349 bits (895), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 168/245 (68%), Positives = 192/245 (78%), Gaps = 9/245 (3%)
Query: 520 LGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARL 579
+GVFP+AS+HALP YR+LMTDPNSPI DFYPTDFEVDMNGKR+SWQGIAKLPFI+E RL
Sbjct: 1 MGVFPAASAHALPLKYRQLMTDPNSPIIDFYPTDFEVDMNGKRFSWQGIAKLPFIEEDRL 60
Query: 580 LDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERL 639
L E+KK+E TLT EEARRNS M +MLFV +H LS IY+L+ L K+R +KE+L
Sbjct: 61 LAEIKKVEDTLTPEEARRNSTMCNMLFVNGAHSLSPYIYSLNSKFGHLPDKDRGAIKEKL 120
Query: 640 NPELSDGMNGYISPCAGDPHPPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGV 699
+P S GMNGYI+ C GDP PPVFRSPV +EDIM NQV+C+IYKLPD HKH+ RPPAGV
Sbjct: 121 DPSASGGMNGYIALCGGDPSPPVFRSPVDGLEDIMDNQVICSIYKLPDPHKHIARPPAGV 180
Query: 700 IFPKKIVQLEDLKPAPVLWHEDSGRRPHEN---------GRHNPHGTISGRQLGEAAHRL 750
I PKK V+ DLKP PVLWHEDSGRRPH+N R NP G +SGRQLGEAAHRL
Sbjct: 181 IIPKKSVEAGDLKPPPVLWHEDSGRRPHDNNHRRPYDNSNRQNPSGALSGRQLGEAAHRL 240
Query: 751 VANSL 755
V NSL
Sbjct: 241 VVNSL 245
>gi|68467259|ref|XP_722291.1| hypothetical protein CaO19.12434 [Candida albicans SC5314]
gi|46444252|gb|EAL03528.1| hypothetical protein CaO19.12434 [Candida albicans SC5314]
Length = 1469
Score = 348 bits (894), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 238/646 (36%), Positives = 334/646 (51%), Gaps = 102/646 (15%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + +A E L++ E G ++P K D FDSN ITPGTEFMA L
Sbjct: 58 MNQQRARRFRTAYEA------EINLKKAIEN-GEEIP-KEDP--FDSNSITPGTEFMANL 107
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+IH ++ D W I++ILS VPGEGEHKIM Y+R R+ Y+PN RHC+Y
Sbjct: 108 TNNLKYFIHKKITEDSSWANIEIILSGHEVPGEGEHKIMEYIRSIRSQDDYNPNLRHCIY 167
Query: 121 GLDADLIMLALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADLIML L TH+ HF++LR EV F P +RK G D
Sbjct: 168 GLDADLIMLGLVTHDPHFALLREEVTFGP-----------------------QRKVGPKD 204
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFR-IPNP-PFEIDLECIVDDFIFMCFFVGNDF 237
+ + + LH+ LREYL EF+ I N FE D + I+DDFI + + +GNDF
Sbjct: 205 -------LHDQKFYLLHLSLLREYLSLEFQEIENQLNFEYDFDRILDDFILIMYVIGNDF 257
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
LP++P L I +GA LL+A +K+ GY+ + K +L R+ +I+ + +E F+K
Sbjct: 258 LPNLPDLFINKGAFPLLIAAFKQTLLESDGYINENGKINLVRLNIYIKILSKFEFENFEK 317
Query: 298 RARLHQRHAE---------RIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSP 348
H+ E I EK + R G + L + LV + AS P
Sbjct: 318 ----HEVDVEWFNKKLDDISISGEKKRQRIG-KLLILKEQKKLVGFIKPWLMEWASQPI- 371
Query: 349 SPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKL 408
+E + GK + +K + I +EA F ++ + ++AKL
Sbjct: 372 -----NEILNLDQQGKLPTLHLNKDDVEKNLEFIKEFAIEA--GFLIIHSQSNDTYEAKL 424
Query: 409 K-----------------ELLRDKSDAFNSDNPEEDKVKLGEP---------GWKERYYE 442
LR + S N E + L E WK YY+
Sbjct: 425 DIDGISPTESEEEHEERITELRKTIKQYQSANLIESEEVLNETKEVYSEKFQSWKNDYYQ 484
Query: 443 EKFNAKTPEEREETRKDVV---LRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASD--- 496
K + + EE + D++ Y EGL WV++YYY G SW W+Y YHYAP SD
Sbjct: 485 PKLHFSI--DTEEGKGDLIEMTKHYIEGLQWVLYYYYRGCPSWNWYYRYHYAPRISDISL 542
Query: 497 -LKDL--DQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTD 553
L++L ++ ++ FEL HPFKPF QL+ V P+ S +P YR LM+D SPI +FYP +
Sbjct: 543 GLEELINEKTDLKFELSHPFKPFEQLMAVLPARSKKLMPVVYRPLMSDEKSPIINFYPHE 602
Query: 554 FEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 599
++DMNGK SW+ + L F+DE +L++ +K IE LT EE +RNS
Sbjct: 603 VDIDMNGKTASWEAVVLLDFVDEKKLIEALKPIESKLTPEEKQRNS 648
>gi|68467492|ref|XP_722179.1| hypothetical protein CaO19.4969 [Candida albicans SC5314]
gi|46444129|gb|EAL03406.1| hypothetical protein CaO19.4969 [Candida albicans SC5314]
Length = 1422
Score = 348 bits (893), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 238/646 (36%), Positives = 334/646 (51%), Gaps = 102/646 (15%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + +A E L++ E G ++P K D FDSN ITPGTEFMA L
Sbjct: 12 MNQQRARRFRTAYEA------EINLKKAIEN-GEEIP-KEDP--FDSNSITPGTEFMANL 61
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+IH ++ D W I++ILS VPGEGEHKIM Y+R R+ Y+PN RHC+Y
Sbjct: 62 TNNLKYFIHKKITEDSSWANIEIILSGHEVPGEGEHKIMEYIRSIRSQDDYNPNLRHCIY 121
Query: 121 GLDADLIMLALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADLIML L TH+ HF++LR EV F P +RK G D
Sbjct: 122 GLDADLIMLGLVTHDPHFALLREEVTFGP-----------------------QRKVGPKD 158
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFR-IPNP-PFEIDLECIVDDFIFMCFFVGNDF 237
+ + + LH+ LREYL EF+ I N FE D + I+DDFI + + +GNDF
Sbjct: 159 -------LHDQKFYLLHLSLLREYLSLEFQEIENQLNFEYDFDRILDDFILIMYVIGNDF 211
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
LP++P L I +GA LL+A +K+ GY+ + K +L R+ +I+ + +E F+K
Sbjct: 212 LPNLPDLFINKGAFPLLIAAFKQTLLESDGYINENGKINLVRLNIYIKILSKFEFENFEK 271
Query: 298 RARLHQRHAE---------RIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSP 348
H+ E I EK + R G + L + LV + AS P
Sbjct: 272 ----HEVDVEWFNKKLDDISISGEKKRQRIG-KLLILKEQKKLVGFIKPWLMEWASQPI- 325
Query: 349 SPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKL 408
+E + GK + +K + I +EA F ++ + ++AKL
Sbjct: 326 -----NEILNLDQQGKLPTLHLNKDDVEKNLEFIKEFAIEA--GFLIIHSQSNDTYEAKL 378
Query: 409 K-----------------ELLRDKSDAFNSDNPEEDKVKLGEP---------GWKERYYE 442
LR + S N E + L E WK YY+
Sbjct: 379 DIDGISPTESEEEHEERITELRKTIKQYQSANLIESEEVLNETKEVYSEKFQSWKNDYYQ 438
Query: 443 EKFNAKTPEEREETRKDVV---LRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASD--- 496
K + + EE + D++ Y EGL WV++YYY G SW W+Y YHYAP SD
Sbjct: 439 PKLHFSI--DTEEGKGDLIEMTKHYIEGLQWVLYYYYRGCPSWNWYYRYHYAPRISDISL 496
Query: 497 -LKDL--DQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTD 553
L++L ++ ++ FEL HPFKPF QL+ V P+ S +P YR LM+D SPI +FYP +
Sbjct: 497 GLEELINEKTDLKFELSHPFKPFEQLMAVLPARSKKLMPVVYRPLMSDEKSPIINFYPHE 556
Query: 554 FEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 599
++DMNGK SW+ + L F+DE +L++ +K IE LT EE +RNS
Sbjct: 557 VDIDMNGKTASWEAVVLLDFVDEKKLIEALKPIESKLTPEEKQRNS 602
>gi|189209730|ref|XP_001941197.1| 5'-3' exoribonuclease 2 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187977290|gb|EDU43916.1| 5'-3' exoribonuclease 2 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 1391
Score = 348 bits (893), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 231/631 (36%), Positives = 329/631 (52%), Gaps = 68/631 (10%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + D E+ R++ REG ++P + + FDSN ITPGT FMA L
Sbjct: 59 MNQQRARRFRTALDT-------EKAREKAIREGVEMPTE---EAFDSNCITPGTAFMAKL 108
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+I+ +++ D W+ ++V+LS VPGEGEHK+M Y+R + PGYDPN RHCLY
Sbjct: 109 TQQLKYFINKKVSEDIDWQGVEVVLSGHEVPGEGEHKVMEYIRQAKAQPGYDPNRRHCLY 168
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HFS+LRE V T G+Q ++ K+ E +
Sbjct: 169 GLDADLIMLGLLSHDPHFSLLREEV-TFGRQ-------------------SQTKSKELEH 208
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGND 236
+ + +H+ +REYL+ EF+ P F D+E ++DDFI M FFVGND
Sbjct: 209 QN---------FYLMHLCIVREYLELEFQELEEPGALSFPFDMERVIDDFILMAFFVGND 259
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP++P L I EGA+ L+ VYK GY+ + ++ R+ + + + E R F+
Sbjct: 260 FLPNLPHLHINEGALALMFNVYKTVLPKGKGYINEEGVINMERLAILLDELANIEYRHFE 319
Query: 297 KR----ARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLAS---GPSPS 349
A + + K ARRG V Q V + L GP
Sbjct: 320 SENSDAAWFKGKSLGKEDVMKKTARRGTVVMTTQQQALFAQVKSWLNDYLGKKEQGPLDF 379
Query: 350 PYQ-QSECVGRLDNGKGTSGRPHKVPRLSSG-----ATIGAAIVEAENSFETDPQENKEE 403
P ++E + P K + G T +VE ++ E D +
Sbjct: 380 PVSLRAEDRKFVQELAEKLRLPWKTVQNEDGDRHIQVTAPPKLVEGDSDEEEDTDDES-- 437
Query: 404 FKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERY-------YEEKFNAKTPEEREET 456
K + +++ A D ED + + E++ Y+ KF E EE
Sbjct: 438 -KKAIARIVQKYEQAKVVDVSPEDAQSEMQKKYDEKFEAWKNDYYKSKFEWDRSNE-EEL 495
Query: 457 RKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPF 516
RK + Y +GL WV++YYY GV SW W+Y YHY+P SD+K + +I+F+LG PFKPF
Sbjct: 496 RK-LTENYVQGLQWVLYYYYRGVASWPWYYQYHYSPMISDVKRGLKADINFKLGQPFKPF 554
Query: 517 NQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDE 576
QL+GV P S +P+ Y LMT+ +SPI DFYP DF +DMNGK+ W+ + K+PFI E
Sbjct: 555 QQLMGVLPDRSKSIVPKAYWPLMTNEDSPIIDFYPRDFTLDMNGKKQDWEAVVKIPFIQE 614
Query: 577 ARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
RLL + E LT +E RNS + F
Sbjct: 615 DRLLKAMATKEQDLTPDEKARNSFGVSLKFT 645
>gi|198417497|ref|XP_002120271.1| PREDICTED: similar to 5-3 exoribonuclease 1 [Ciona intestinalis]
Length = 665
Score = 348 bits (892), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 207/611 (33%), Positives = 302/611 (49%), Gaps = 128/611 (20%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E ++Q ++ G LP + + FDSN ITPGT FM L
Sbjct: 94 MNQQRGRRFRSAKEA------ENNIKQALQK-GEVLPTE---KRFDSNCITPGTSFMEKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y++ ++ DP W+ IKV LS PGEGEHKIM ++R +R+ P YDPNTRHCLY
Sbjct: 144 QAQLEYFVQNKITTDPSWQGIKVYLSGHQTPGEGEHKIMEFIRYERSQPEYDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADL+ML L THE HF++LRE V Q+ K + A
Sbjct: 204 GLDADLLMLGLCTHEPHFALLREEVKFTRQKS----------------SKTQNAA----- 242
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
+ + LHI LREY+++EF PN PFE ++E I+DD++ M F VGNDF+PH
Sbjct: 243 --------QTTFHLLHISLLREYIEHEFEAPNLPFEFNIESIIDDWVLMGFLVGNDFIPH 294
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P L I A+ L Y + LGGYL +G +L R+E +++A+ S++
Sbjct: 295 LPDLHISTSALPFLYQTYIQVLPTLGGYLNEGGVINLGRLEVYLKAISSFD--------- 345
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRL 360
H E + + A S P ++C+ L
Sbjct: 346 --MDHFEEVYSDYKWLE-------------------------AKSKSKKP---TDCL--L 373
Query: 361 DNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFN 420
G+ T + K+ + I +EA + + + +EFK + + K FN
Sbjct: 374 VGGEVTEDKSLKIVK---DLAIKQGTIEATETVDEEHSTFDQEFKLHKRAYYQTK---FN 427
Query: 421 SDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVC 480
+ E++ + Y G+ W+ HYYY GV
Sbjct: 428 IEGTEDEI-----------------------------STIAYEYILGIQWICHYYYNGVQ 458
Query: 481 SWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMT 540
SW WFYPYHY+P+ SDL ++ ++++ + PF PF QLL V P+AS +PE Y LM
Sbjct: 459 SWDWFYPYHYSPYMSDLCNISTLHLTYNMNQPFLPFQQLLAVLPAASKDCIPEPYWNLM- 517
Query: 541 DPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEA------------RLLDEVKKIEH 588
D +S I DFYP++F D+NGK+ W+ + ++PFI+E RLL ++
Sbjct: 518 DESSIIGDFYPSNFSTDLNGKQQEWEAVVQIPFIEEVTTNNSGCGVMEERLLSAMESCNS 577
Query: 589 TLTEEEARRNS 599
L+ + RRN+
Sbjct: 578 RLSASDKRRNT 588
>gi|154285288|ref|XP_001543439.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150407080|gb|EDN02621.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 1327
Score = 347 bits (890), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 217/596 (36%), Positives = 311/596 (52%), Gaps = 67/596 (11%)
Query: 43 QVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYV 102
+ FDSN ITPGTEFMA L+ L+Y+I+ +++ D W+ ++++LS VPGEGEHKIM Y+
Sbjct: 5 EAFDSNCITPGTEFMAKLTQQLKYFINKKVSEDVEWQGVEIVLSGHEVPGEGEHKIMEYI 64
Query: 103 RLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGH 162
R + PGY P+ RHCLYGLDADLIML L +H+ HF +LRE V T G+Q
Sbjct: 65 RQSKAQPGYQPDIRHCLYGLDADLIMLGLLSHDPHFCLLREEV-TFGRQ----------- 112
Query: 163 LAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPP----FEID 218
+++K+ E + + + +H+ +REYL+ EF+ F D
Sbjct: 113 --------SQKKSKELEHQN---------FYLMHLCMVREYLELEFQELEEENALQFPFD 155
Query: 219 LECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLR 278
LE ++DDFI M FFVGNDFLP++P L I EGA+ + VYK+ LGGY+ + +L
Sbjct: 156 LERVIDDFILMAFFVGNDFLPNLPNLHINEGALAWMFKVYKQVLPKLGGYINEQGTINLE 215
Query: 279 RVEHFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPD--SLVPVSR 336
R+ + ++ E R F+ + R + K + + EP A ++ P +
Sbjct: 216 RLGVLLDSLSDVEFRFFEA-----EFSDARWIKSKMKGEELESSEPPANAKDFAISPAQK 270
Query: 337 FHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHK-VPRLSSGATIGAAIVEAEN---- 391
+R+ + P LD R K V +L+ + V E+
Sbjct: 271 HVFNRIKKYVTHRPVNDQGQFVPLDLSPNLPARDRKFVEQLADDLHLAWTTVSNEHGDRF 330
Query: 392 ------SFETDP--------QENKEEFKAKLKELLR------DKSDAFNSDNPEEDKVKL 431
S ET +N+E A L + R ++ A + E K +L
Sbjct: 331 LRVQLPSKETQTSGSSGDDDGDNEEGQIALLLVMKRYENAKVKETTAEEAQQAAEKKYEL 390
Query: 432 GEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYA 491
WK YY+ KF + EE R+ + Y +GL WV++YYY GV SW WFY YHY+
Sbjct: 391 KFQEWKNNYYKSKFGWDM-DNHEEMRQ-LTENYVQGLQWVLYYYYRGVASWPWFYQYHYS 448
Query: 492 PFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYP 551
P SD+K + +++F+LG PF PF QL+GV P S +P + +LMT P SPI DFYP
Sbjct: 449 PMISDVKLGLEADMNFDLGQPFHPFEQLMGVLPDRSKQIVPSAFHELMTSPESPIIDFYP 508
Query: 552 TDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
DFE+DMNGK+ W+ + K+PFIDE RLL + +H LT EE RN + F
Sbjct: 509 RDFELDMNGKKMEWEAVVKIPFIDEKRLLSAMATKKHLLTPEENARNEFGVTLKFT 564
>gi|383853936|ref|XP_003702478.1| PREDICTED: 5'-3' exoribonuclease 1-like [Megachile rotundata]
Length = 1665
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 208/601 (34%), Positives = 286/601 (47%), Gaps = 106/601 (17%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
+NQQR RRFRA+KDA A+ E +E R FDSN ITPGT FM +
Sbjct: 94 INQQRGRRFRAAKDAEIQEAKARAEGIEIPKEKR----------FDSNAITPGTAFMYKV 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y++ ++++D W+K KVI S + VPGEGEHKIM Y+R + P YD +T+HCLY
Sbjct: 144 NEHLRYFVTYKISSDKLWQKCKVIFSGSEVPGEGEHKIMDYIRYMKAQPDYDIHTKHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L THE+HF++LRE V +D+
Sbjct: 204 GLDADLIMLGLCTHELHFTLLREEV-------------------------------TYDK 232
Query: 181 KGDEVVVPKKP-YQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K +++ P+K + HI LREY+++EF F DLE I+DD+I M F VGNDF
Sbjct: 233 KQTKILTPEKTKFCLFHISLLREYINHEFSQLREKLSFSYDLEKIIDDWILMGFLVGNDF 292
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I GA+++L VY L GY+ + L R E F+
Sbjct: 293 IPHLPNLHITHGALSILYEVYIDVLPTLEGYINEAGTLKLDRFEKFM------------- 339
Query: 298 RARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECV 357
E L+ D L + + G P ++E
Sbjct: 340 -------------------------ERLSSFDILKFSEHYADLKYLEGKMGRPLTETE-- 372
Query: 358 GRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSD 417
++++ K S + P+ + A F + E+ D
Sbjct: 373 -KVNHRKSESSEQNSSPKKAQDKRFNA-------------------FIKAVDEMSIGTED 412
Query: 418 AFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYE 477
D + + + K YY K K E E+ + Y L W +HYYY
Sbjct: 413 ELRDDESDSETYTMEFVQHKRDYYINKL--KYEEIDEDFLRSQAEGYVTALQWNLHYYYN 470
Query: 478 GVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRK 537
G CSW W+YP+HYAP+ SD+KD + FELG PF PF QLL V P S LP ++
Sbjct: 471 GCCSWTWYYPHHYAPYISDIKDFKNLKLEFELGEPFLPFEQLLAVLPPYSKELLPSAFQP 530
Query: 538 LMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARR 597
L+T+ SPI D+YP DFE D+NGK W+ + +PFID RL+D + LT EE R
Sbjct: 531 LLTEEQSPIIDYYPMDFETDLNGKTLEWEAVILIPFIDATRLVDAMAPHYDKLTPEEKAR 590
Query: 598 N 598
N
Sbjct: 591 N 591
>gi|195479788|ref|XP_002101029.1| GE17387 [Drosophila yakuba]
gi|194188553|gb|EDX02137.1| GE17387 [Drosophila yakuba]
Length = 1581
Score = 347 bits (889), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 207/603 (34%), Positives = 301/603 (49%), Gaps = 128/603 (21%)
Query: 1 MNQQRSRRFRASKDA--ADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMA 58
MNQQRSRRFR++++A ++ A + R+E ER FDSN ITPGTEFM
Sbjct: 94 MNQQRSRRFRSAREAEQLEAKAAQRGERREHER-------------FDSNCITPGTEFMV 140
Query: 59 VLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHC 118
L L+ ++ +++ DP W++ VILS PGEGEHKIM Y+R + P +DPNTRHC
Sbjct: 141 RLQEGLRAFLKTKISTDPLWQRCSVILSGQETPGEGEHKIMDYIRYMKAQPDFDPNTRHC 200
Query: 119 LYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEF 178
LYGLDADLI+L L THE+HF +LRE V +F
Sbjct: 201 LYGLDADLIILGLCTHELHFVVLREEV-------------------------------KF 229
Query: 179 DEKGDEVVVPKKPYQFLHIWTLREYLDYEF-RIPNPPFEIDLECIVDDFIFMCFFVGNDF 237
V + + LH+ LREYL+ EF + ++D+ ++DD++ M F VGNDF
Sbjct: 230 GRNVKRTSVEETRFFLLHLGLLREYLELEFDALSTAERKLDVAQLIDDWVLMGFMVGNDF 289
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y + + LGG + + K +L R++ F+ A+ E F++
Sbjct: 290 IPHLPCLHISSNALPLLYRTYIRIYPTLGGNINENGKLNLHRLQIFMSALTEVELEQFKE 349
Query: 298 RARLHQRHAERIKREKAQARRGD-DVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSEC 356
HA+ +K A+ D DV + + ++
Sbjct: 350 -------HADDLKYMNAKTEAFDIDVAEITESQNI------------------------- 377
Query: 357 VGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKS 416
+ +GA I E+ +E D +E
Sbjct: 378 ----------------------DSDLGALINESMKLYEDDSEE----------------- 398
Query: 417 DAFNSDNPEEDKVKLGE-PGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYY 475
D +E+ V + E +K +Y KF + + E +++ Y L WV+ YY
Sbjct: 399 -----DWSDEEAVLMNEFKNYKRNFYRNKFKR---DPQGELIEELGHHYVNALQWVLDYY 450
Query: 476 YEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHY 535
Y GV SW W+YP+HYAPF SDL++++Q I F++G PF PF QLL V P+ASS LP Y
Sbjct: 451 YRGVQSWDWYYPFHYAPFISDLRNIEQVQIDFQMGTPFLPFQQLLAVLPAASSKLLPVAY 510
Query: 536 RKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEA 595
LM +SP+++FYP +FE D+NGK++ W+ + +PFIDE RLL + E L+ E
Sbjct: 511 HDLMLLASSPLAEFYPLEFESDLNGKKHDWEAVVLIPFIDERRLLAAMLPCEAQLSLAER 570
Query: 596 RRN 598
RN
Sbjct: 571 ERN 573
>gi|149239226|ref|XP_001525489.1| 5'-3' exoribonuclease 1 [Lodderomyces elongisporus NRRL YB-4239]
gi|146450982|gb|EDK45238.1| 5'-3' exoribonuclease 1 [Lodderomyces elongisporus NRRL YB-4239]
Length = 1512
Score = 346 bits (888), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 226/639 (35%), Positives = 326/639 (51%), Gaps = 89/639 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + +A EE L++ E G +P K D FDSN ITPGTEFMA L
Sbjct: 58 MNQQRARRFRTAYEA------EENLKKAIEN-GEDIP-KEDP--FDSNSITPGTEFMAKL 107
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+IH ++ D W +++ILS VPGEGEHKIM Y+R R P YDPN RHC+Y
Sbjct: 108 TDNLKYFIHKKITEDSRWANVEIILSGHEVPGEGEHKIMEYIRAVRAQPEYDPNLRHCIY 167
Query: 121 GLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADLIML L +H+ HF++LRE V F P + N G
Sbjct: 168 GLDADLIMLGLVSHDPHFALLREEVTFGPRR--------------GNSSGPKD------- 206
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
V ++ + LH+ LREYL+ EF+ FE D E I+DDFI + + +GNDF
Sbjct: 207 -------VTEQKFYLLHLSVLREYLELEFKEIEEQISFEFDFERILDDFILIMYVIGNDF 259
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGS-------- 289
LPH+P L + +GA LL++ +K+ GY+ + K +L+R+ ++ +
Sbjct: 260 LPHLPDLHLNKGAFPLLLSTFKQTLLQSDGYINEDGKINLKRLNIWVHHLSEFEFENFEE 319
Query: 290 --YEDRIFQKRARLHQRHAERIKRE-------KAQARRGDDVEPLAQPDSLVPVSRFHGS 340
+ F K+ E+ +++ K Q + ++P S PVS
Sbjct: 320 KEVDIEWFNKKLDDVSISGEKKRKKIGKMLILKEQKKLVGYIKPWLMEVSSQPVSTLIDW 379
Query: 341 RLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQ-- 398
P ++ + LD K + L +G I + E + + D
Sbjct: 380 ANEDKLPLLPLRKEDVENNLDFLKEFA--------LHAGFLIVHSKSEDNYTAKFDVDGL 431
Query: 399 ---ENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEP---------GWKERYYEEKFN 446
E +++F+ ++ EL R + + N E + L E WK YY+EK +
Sbjct: 432 PSFETRDDFEERINEL-RRTVKQYQAANLVESESYLNETKEVYQTKFKNWKNDYYKEKLH 490
Query: 447 AKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLK-DLDQF-- 503
+++E+ K + Y EGL WV++YYY G SW ++Y YHYAP SD+ L+
Sbjct: 491 FSI-DDKEDLLK-ITEHYVEGLQWVLYYYYRGCPSWNFYYRYHYAPRISDISLGLEALIE 548
Query: 504 ---NISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNG 560
++ FE HPFKPF QL+ V P+ S +P YR LM D SPI FYP + +VDMNG
Sbjct: 549 KGEDLKFEQSHPFKPFEQLMAVLPARSRKLMPAVYRPLMIDEKSPIIQFYPHEVDVDMNG 608
Query: 561 KRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 599
K +W+ + L F+DE +L+ +K IE LT EE +RNS
Sbjct: 609 KTATWEAVVLLDFVDEKKLIAALKPIEEKLTPEEKKRNS 647
>gi|367015260|ref|XP_003682129.1| hypothetical protein TDEL_0F01070 [Torulaspora delbrueckii]
gi|359749791|emb|CCE92918.1| hypothetical protein TDEL_0F01070 [Torulaspora delbrueckii]
Length = 1471
Score = 345 bits (884), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 231/665 (34%), Positives = 335/665 (50%), Gaps = 95/665 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA E+ ++ G ++P + FDSN ITPGTEFMA L
Sbjct: 94 MNQQRARRFRTAMDA-------EKAFEKAVANGEEIP---KGEPFDSNSITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ LQY+IH ++ ND W I VI S VPGEGEHKIM ++R R +D NTRHC+Y
Sbjct: 144 TKNLQYFIHDKITNDSKWRDIDVIFSGHEVPGEGEHKIMDFIRNLRAQKDFDSNTRHCIY 203
Query: 121 GLDADLIMLALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADLIML L+ H+ HF++LR EVVF G+ A + E +
Sbjct: 204 GLDADLIMLGLSVHDPHFALLREEVVF-----------GRRSSTAKSLENQN-------- 244
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDF 237
+ LHI LREY+ EF+ F+ D E I+DDFI + F +GNDF
Sbjct: 245 ------------FYLLHISILREYMQLEFQEIADELQFDYDFERILDDFILVMFVIGNDF 292
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
LP++P L + +GA +L+ +K+ + GY+ + + +L R+ +++ + +E F++
Sbjct: 293 LPNLPDLHLNKGAFPVLLQTFKEALLHVDGYINEHGQINLERLGVWLEYLSKFEQMNFER 352
Query: 298 R---ARLHQRHAERIKR--EKAQARRG--------DDVEPLAQPDSL-VPVSRFHGSRLA 343
+ E I EK +AR G + L +P + V RFH
Sbjct: 353 SDVDVDWFNQQLENISLEGEKERARTGKKLLLKQQKKIVGLVKPWVIDVMSQRFH----- 407
Query: 344 SGPSPSPYQQSECVGRLDNGKGTSGRPH-KVPRLSSGATIGAAIVEAENSFETD-----P 397
P+ ++ LD+ + T K G + + + S + D P
Sbjct: 408 ----PNLAEEDVPTLSLDDDRITENLEFLKEFAFQLGLFVTHSRSKDTYSLKVDVDAINP 463
Query: 398 QENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGE---------PGWKERYYEEKFNAK 448
+E EEF+ + K +R + ED+ +L WK++YY++K
Sbjct: 464 EETDEEFEQRQKS-IRKTLKRYQQAILVEDQEELDNEREVYDERFAQWKDKYYKDKLGFS 522
Query: 449 TPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLK-DLDQFNISF 507
E + T+ + Y EGL WV++YYY G SW W+Y +HY+P SDLK LDQ ISF
Sbjct: 523 FNETEKLTK--LCQNYVEGLQWVLYYYYRGCQSWGWYYRHHYSPRISDLKLGLDQV-ISF 579
Query: 508 ELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQG 567
E GHPF PF QL+ V P S + +P R LM + NSPI DFYP + ++D NGK W+
Sbjct: 580 EKGHPFTPFQQLMAVLPERSKNLIPTALRPLMFNENSPIRDFYPKEVDLDKNGKTADWEA 639
Query: 568 IAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF-------VLLSHPLSASIYTL 620
+ L F+DE RL+D + L+ EE RN + D+++ VL PLS +
Sbjct: 640 VVLLSFVDEHRLIDAMAPYLPRLSPEEKVRNGVGKDLIYYFNPQVDVLYKSPLSGIFSDI 699
Query: 621 D-EHC 624
+ +HC
Sbjct: 700 EHDHC 704
>gi|6321265|ref|NP_011342.1| Xrn1p [Saccharomyces cerevisiae S288c]
gi|125342|sp|P22147.1|XRN1_YEAST RecName: Full=5'-3' exoribonuclease 1; AltName: Full=DNA strand
transfer protein beta; Short=STP-beta; AltName:
Full=KAR(-)-enhancing mutation protein; AltName:
Full=Strand exchange protein 1; AltName: Full=p175
gi|3847|emb|CAA38520.1| KEM1 protein [Saccharomyces cerevisiae]
gi|4413|emb|CAA43487.1| RAR5 [Saccharomyces cerevisiae]
gi|172580|gb|AAA35036.1| strand exchange protein 1 [Saccharomyces cerevisiae]
gi|172775|gb|AAA35125.1| DNA strand transferase beta [Saccharomyces cerevisiae]
gi|173192|gb|AAA35219.1| 5'-3' exoribonuclease [Saccharomyces cerevisiae]
gi|695728|emb|CAA59180.1| DNA strand transferase, exoribonuclease [Saccharomyces cerevisiae]
gi|1322778|emb|CAA96885.1| KEM1 [Saccharomyces cerevisiae]
gi|285812040|tpg|DAA07940.1| TPA: Xrn1p [Saccharomyces cerevisiae S288c]
gi|392299577|gb|EIW10671.1| Kem1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1528
Score = 344 bits (883), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 219/631 (34%), Positives = 336/631 (53%), Gaps = 70/631 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA E+ L++ E G ++P + FDSN ITPGTEFMA L
Sbjct: 94 MNQQRARRFRTAMDA------EKALKKAIEN-GDEIP---KGEPFDSNSITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ LQY+IH +++ND W ++++I S VPGEGEHKIM+++R ++ ++ NTRHC+Y
Sbjct: 144 TKNLQYFIHDKISNDSKWREVQIIFSGHEVPGEGEHKIMNFIRHLKSQKDFNQNTRHCIY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L+TH HF++LRE V T G++ N E K+
Sbjct: 204 GLDADLIMLGLSTHGPHFALLREEV-TFGRR--------------NSEKKS--------- 239
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFL 238
+ + + LH+ LREY++ EF+ FE + E I+DDFI + F +GNDFL
Sbjct: 240 ------LEHQNFYLLHLSLLREYMELEFKEIADEMQFEYNFERILDDFILVMFVIGNDFL 293
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 298
P++P L + +GA +L+ +K+ GY+ + K +L+R+ ++ + +E F+K
Sbjct: 294 PNLPDLHLNKGAFPVLLQTFKEALLHTDGYINEHGKINLKRLGVWLNYLSQFELLNFEKD 353
Query: 299 ---ARLHQRHAERIKRE--KAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQ 353
+ E I E + + R G + Q + + + +L SP
Sbjct: 354 DIDVEWFNKQLENISLEGERKRQRVGKKLLVKQQKKLIGSIKPWLMEQLQEKLSPD--LP 411
Query: 354 SECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAEN----SFETD-----PQENKEEF 404
E + L+ K + H +G I +++ S + D P E +EEF
Sbjct: 412 DEEIPTLELPKDLDMKDHLEFLKEFAFDLGLFITHSKSKGSYSLKMDLDSINPDETEEEF 471
Query: 405 KAK---LKELLRDKSDAFNSDNPEE---DKVKLGE--PGWKERYYEEKFNAKTPEEREET 456
+ + +++ ++ +A ++ EE +K E WK YY +K T + EE
Sbjct: 472 QNRVNSIRKTIKKYQNAIIVEDKEELETEKTIYNERFERWKHEYYHDKLKFTT--DSEEK 529
Query: 457 RKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDL-KDLDQFNISFELGHPFKP 515
+D+ Y EGL WV++YYY G SW W+YP+HYAP SDL K LDQ +I F+L PF P
Sbjct: 530 VRDLAKDYVEGLQWVLYYYYRGCPSWSWYYPHHYAPRISDLAKGLDQ-DIEFDLSKPFTP 588
Query: 516 FNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFID 575
F QL+ V P S + +P +R LM D SPI DFYP + ++D NGK W+ + + F+D
Sbjct: 589 FQQLMAVLPERSKNLIPPAFRPLMYDEQSPIHDFYPAEVQLDKNGKTADWEAVVLISFVD 648
Query: 576 EARLLDEVKKIEHTLTEEEARRNSIMADMLF 606
E RL++ ++ L+ EE RN D+++
Sbjct: 649 EKRLIEAMQPYLRKLSPEEKTRNQFGKDLIY 679
>gi|410077707|ref|XP_003956435.1| hypothetical protein KAFR_0C03080 [Kazachstania africana CBS 2517]
gi|372463019|emb|CCF57300.1| hypothetical protein KAFR_0C03080 [Kazachstania africana CBS 2517]
Length = 1499
Score = 344 bits (883), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 232/659 (35%), Positives = 335/659 (50%), Gaps = 79/659 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR + DA E L++ E+ G ++P + FDSN ITPGTEFMA L
Sbjct: 94 MNQQRSRRFRTAMDA------EAALKKAIEK-GEEIP---KGEPFDSNAITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+IH +++ND W ++ VI S VPGEGEHKIM ++R R+ Y+ NTRHC+Y
Sbjct: 144 TKNLKYFIHDKISNDSKWREVDVIFSGHEVPGEGEHKIMDFIRNIRSQKDYNNNTRHCIY 203
Query: 121 GLDADLIMLALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADLIML L+TH HF++LR EVVF G+ K +
Sbjct: 204 GLDADLIMLGLSTHAPHFALLREEVVF----------------------GRRSSKPAPLE 241
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDF 237
+ + LH+ LREY++ EF + F+ D E I+DDFI + F +GNDF
Sbjct: 242 HQN---------FYLLHLSLLREYMELEFNEIADDLKFDYDFERILDDFILVMFVIGNDF 292
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
LP++P L + +GA +L+ +K+ L GY+ + + +L R+ ++ + +E F+K
Sbjct: 293 LPNLPDLHLNKGAFPVLLQTFKEALLHLDGYINENGQINLERLRVWLNYLSQFELMNFEK 352
Query: 298 R---ARLHQRHAERIKREKAQAR-RGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQ 353
+ E I E + R R L Q +V + LA+ PS
Sbjct: 353 NDIDVEWFNQQLENISLEGERKRARSGKKLLLKQQKKIVGKVKPWIMHLANEKFPSDLPD 412
Query: 354 SEC-VGRLDNGKGTSGRPHKVPRLSSGA-TIGAAIVEAEN----SFETD-----PQENKE 402
+ L++ K + L A +G IV +++ S + D P E E
Sbjct: 413 DQIPTLLLNDDKSEFNVAENLAFLKEFAHDLGVFIVHSKSKDTYSLKLDIDGINPSETDE 472
Query: 403 EFKAK---LKELLRDKSDAFNSDNPEE---DKVKLGEP--GWKERYYEEKFNAKTPEERE 454
E + ++ +++ A ++ EE ++ E WK+ YY++K +
Sbjct: 473 EHNERVGAIRRVIKRYQQAVLVEDAEELEREQTLYNEKFQNWKQEYYKDKLGF--AQNDS 530
Query: 455 ETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDL-KDLDQFNISFELGHPF 513
ET + Y EGL WV++YYY G SW W+Y HYAP SDL K LDQ I F+ G PF
Sbjct: 531 ETVTTLAKNYVEGLQWVLYYYYRGCPSWGWYYRDHYAPRISDLEKGLDQI-IKFDKGRPF 589
Query: 514 KPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPF 573
PF QL+ V P S + +P +R LM D NSPI DFYP+ ++D NGK W+ + L F
Sbjct: 590 TPFEQLMAVLPERSKNLIPAAFRPLMYDTNSPILDFYPSQVKLDKNGKTADWEAVVLLTF 649
Query: 574 IDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV-------LLSHPLSASIYTLD-EHC 624
+DE RL+D +K + L+ EE RN D+ F+ L PLS L+ HC
Sbjct: 650 VDENRLVDAMKPLLSKLSPEEKVRNQFGTDLKFIFSPQVDNLYKSPLSGIFSDLENNHC 708
>gi|148696568|gb|EDL28515.1| 5'-3' exoribonuclease 2, isoform CRA_c [Mus musculus]
Length = 725
Score = 344 bits (883), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 216/558 (38%), Positives = 300/558 (53%), Gaps = 60/558 (10%)
Query: 161 GHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLE 220
GH +CEG + K G+ DE D + + + FL + LREYL+ E + + PF D+E
Sbjct: 44 GHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREYLERELTMASLPFPFDVE 103
Query: 221 CIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRV 280
+DD++FMCFFVGNDFLPH+P+LEIREGAI+ L+ +YK GGYLT+ +L+RV
Sbjct: 104 RSIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRV 163
Query: 281 EHFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFH-- 338
+ + AVG ED IF+KR R K ++ + +R +P P ++
Sbjct: 164 QMIMLAVGEVEDSIFKKRKDDEDSFRRRQKEKRKRMKRD---QPAFTPSGILTPHALGSR 220
Query: 339 ---GSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFET 395
G ++AS P + Y+ R+ S P+ SF +
Sbjct: 221 NSPGCQVASNPRQAAYEM-----RMQRNSSPSISPN-------------------TSFAS 256
Query: 396 DPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREE 455
D + L + R D+ + P ED V+L E GWK+RYY+ KF+ +E+
Sbjct: 257 DGS------PSPLGGIKRKAEDSDSEPEP-EDNVRLWEAGWKQRYYKNKFDVDAADEK-- 307
Query: 456 TRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFK 514
R+ VV Y EGLCWV+ YYY+G SW+W+YP+HYAPFASD + + + FE G PFK
Sbjct: 308 FRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMSSEFEKGTKPFK 367
Query: 515 PFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFI 574
P QL+GVFP+AS + LP +RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+
Sbjct: 368 PLEQLMGVFPAASGNFLPPTWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFV 427
Query: 575 DEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVE 634
DE RL ++++ LT EE RRNS+ D+LFV HPL I L Q E V+
Sbjct: 428 DERRLRAALEEVYPDLTPEENRRNSLGGDVLFVGKLHPLRDFILEL----YQTGSTEPVD 483
Query: 635 VKERLNPELSDGMNGYISPCAGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHV 692
V PEL G+ G S P SPV + D+ N + +K P A +V
Sbjct: 484 VP----PELCHGIQGTFSLDEEAILPDQTVCSPVPMLRDLTQNTAVSINFKDPQFAEDYV 539
Query: 693 --------TRPPAGVIFP 702
R PA V+ P
Sbjct: 540 FKAAMLPGARKPATVLKP 557
>gi|410730385|ref|XP_003671372.2| hypothetical protein NDAI_0G03520 [Naumovozyma dairenensis CBS 421]
gi|401780190|emb|CCD26129.2| hypothetical protein NDAI_0G03520 [Naumovozyma dairenensis CBS 421]
Length = 1548
Score = 344 bits (882), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 227/672 (33%), Positives = 329/672 (48%), Gaps = 108/672 (16%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR + DA E L++ E G ++P + FDSN ITPGTEFMA L
Sbjct: 94 MNQQRSRRFRTAMDA------ENALQKALEN-GEEIP---KGEPFDSNSITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+IH +++ND W ++++I S PGEGEHKIM ++R R G+D NTRHC+Y
Sbjct: 144 TKNLKYFIHEKISNDAQWREVEIIFSGHEAPGEGEHKIMDFIRTLRAQKGFDHNTRHCIY 203
Query: 121 GLDADLIMLALATHEVHFSILR-EVVF---TPGQQDKCFLCGQPGHLAANCEGKAKRKAG 176
GLDADLI+L L+TH HF++LR EVVF P Q A E +
Sbjct: 204 GLDADLIILGLSTHAPHFALLREEVVFGRRNPNQ-------------AKTLENQN----- 245
Query: 177 EFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVG 234
+ LH+ LREY++ EF+ FE D E ++DDF+ + F +G
Sbjct: 246 ---------------FYLLHLSLLREYMELEFKEIADEMQFEFDFERVLDDFVLVMFVIG 290
Query: 235 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI 294
NDFLP++P L + +GA +L+ +K+ GY+ + K +L R+ ++Q + +E
Sbjct: 291 NDFLPNLPDLHLNKGAFVVLLQTFKEALLHSDGYINEHGKINLERLRVWLQYLSQFELMN 350
Query: 295 FQKR---ARLHQRHAERIKR--EKAQARRG-----------------------DDVEPLA 326
F+K + E I E+ +AR G + P+
Sbjct: 351 FEKNDIDVEWFNQQLENISLEGERKRARIGKKLLIKQQKKIVGMVKPWIIKEMSEKIPIG 410
Query: 327 QPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAI 386
PD +P P V LD K + + S +
Sbjct: 411 TPDEQIPT--------------LPLTNENIVENLDFLKKFAFDLGLIVVHSKSKDTYSLR 456
Query: 387 VEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNP-----EEDKVKLGEPGWKERYY 441
++ + ++ +E + + L++ ++ A ++ E+D WK+ YY
Sbjct: 457 IDLDGFDASESEEEHVKRLSSLRKTIKSYQQAVLVEDADELQREQDLYNTRFESWKKDYY 516
Query: 442 EEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDL-KDL 500
++K K + EE + Y EGL WV++YYY G SW W+Y YHYAP SDL K L
Sbjct: 517 KDKLGFKA--DIEENITKLTKNYVEGLQWVLYYYYRGCPSWGWYYRYHYAPRISDLEKGL 574
Query: 501 DQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNG 560
DQ I F +PFKPF QL+ V P S + +P R LM DP SPI DFYPT+ ++D NG
Sbjct: 575 DQV-IEFAKDNPFKPFEQLMSVLPERSKNLIPPVLRPLMYDPKSPILDFYPTEVKLDKNG 633
Query: 561 KRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF-------VLLSHPL 613
K W+ + LPF+DE RL+D +K L+ EE RNS + F ++ PL
Sbjct: 634 KTADWEAVVLLPFVDETRLIDAMKPYLSKLSPEEKARNSFGKPLTFTFNPQVDLVYKSPL 693
Query: 614 SASIYTLD-EHC 624
S L+ +HC
Sbjct: 694 SGLFSDLEHDHC 705
>gi|365765775|gb|EHN07281.1| Kem1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1528
Score = 344 bits (882), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 219/631 (34%), Positives = 336/631 (53%), Gaps = 70/631 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA E+ L++ E G ++P + FDSN ITPGTEFMA L
Sbjct: 94 MNQQRARRFRTAMDA------EKALKKAIEN-GDEIP---KGEPFDSNSITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ LQY+IH +++ND W ++++I S VPGEGEHKIM+++R ++ ++ NTRHC+Y
Sbjct: 144 TKNLQYFIHDKISNDSKWREVQIIFSGHEVPGEGEHKIMNFIRHLKSQKDFNQNTRHCIY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L+TH HF++LRE V T G++ N E K+
Sbjct: 204 GLDADLIMLGLSTHGPHFALLREEV-TFGRR--------------NSEKKS--------- 239
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFL 238
+ + + LH+ LREY++ EF+ FE + E I+DDFI + F +GNDFL
Sbjct: 240 ------LEHQNFYLLHLSLLREYMELEFKEIADEMQFEYNFERILDDFILVMFVIGNDFL 293
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 298
P++P L + +GA +L+ +K+ GY+ + K +L+R+ ++ + +E F+K
Sbjct: 294 PNLPDLHLNKGAFPVLLQTFKEALLHTDGYINEHGKINLKRLGVWLNYLSQFELLNFEKD 353
Query: 299 ---ARLHQRHAERIKRE--KAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQ 353
+ E I E + + R G + Q + + + +L SP
Sbjct: 354 DIDVEWFNKQLENISLEGERKRQRVGKKLLVKQQKKLIGSIKPWLMEQLQEKLSPD--LP 411
Query: 354 SECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAEN----SFETD-----PQENKEEF 404
E + L+ K + H +G I +++ S + D P E +EEF
Sbjct: 412 DEEIPTLELPKDLDMKDHLEFLKEFAFDLGLFITHSKSKGSYSLKMDLDSINPDETEEEF 471
Query: 405 KAK---LKELLRDKSDAFNSDNPEE---DKVKLGE--PGWKERYYEEKFNAKTPEEREET 456
+ + +++ ++ +A ++ EE +K E WK YY +K T + EE
Sbjct: 472 QNRVNSIRKTIKKYQNAIIVEDKEELETEKTIYNERFERWKHEYYHDKLKFTT--DSEEK 529
Query: 457 RKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDL-KDLDQFNISFELGHPFKP 515
+D+ Y EGL WV++YYY G SW W+YP+HYAP SDL K LDQ +I F+L PF P
Sbjct: 530 VRDLAKDYVEGLQWVLYYYYRGCPSWSWYYPHHYAPRISDLVKGLDQ-DIEFDLSKPFTP 588
Query: 516 FNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFID 575
F QL+ V P S + +P +R LM D SPI DFYP + ++D NGK W+ + + F+D
Sbjct: 589 FQQLMAVLPERSKNLIPPAFRPLMYDEQSPIHDFYPAEVQLDKNGKTADWEAVVLISFVD 648
Query: 576 EARLLDEVKKIEHTLTEEEARRNSIMADMLF 606
E RL++ ++ L+ EE RN D+++
Sbjct: 649 EKRLIEAMQPYLCKLSPEEKTRNQFGKDLIY 679
>gi|151943641|gb|EDN61951.1| 5'-3'-exonuclease [Saccharomyces cerevisiae YJM789]
Length = 1528
Score = 344 bits (882), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 219/631 (34%), Positives = 336/631 (53%), Gaps = 70/631 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA E+ L++ E G ++P + FDSN ITPGTEFMA L
Sbjct: 94 MNQQRARRFRTAMDA------EKALKKAIEN-GDEIP---KGEPFDSNSITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ LQY+IH +++ND W ++++I S VPGEGEHKIM+++R ++ ++ NTRHC+Y
Sbjct: 144 TKNLQYFIHDKISNDSKWREVQIIFSGHEVPGEGEHKIMNFIRHLKSQKDFNQNTRHCIY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L+TH HF++LRE V T G++ N E K+
Sbjct: 204 GLDADLIMLGLSTHGPHFALLREEV-TFGRR--------------NSEKKS--------- 239
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFL 238
+ + + LH+ LREY++ EF+ FE + E I+DDFI + F +GNDFL
Sbjct: 240 ------LEHQNFYLLHLSLLREYMELEFKEIADEMQFEYNFERILDDFILVMFVIGNDFL 293
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 298
P++P L + +GA +L+ +K+ GY+ + K +L+R+ ++ + +E F+K
Sbjct: 294 PNLPDLHLNKGAFPVLLQTFKEALLHTDGYINEHGKINLKRLGVWLNYLSQFELLNFEKD 353
Query: 299 ---ARLHQRHAERIKRE--KAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQ 353
+ E I E + + R G + Q + + + +L SP
Sbjct: 354 DIDVEWFNKQLENISLEGERKRQRVGKKLLVKQQKKLIGSIKPWLMEQLQEKLSPD--LP 411
Query: 354 SECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAEN----SFETD-----PQENKEEF 404
E + L+ K + H +G I +++ S + D P E +EEF
Sbjct: 412 DEEIPTLELPKDLDMKDHLEFLKEFAFDLGLFITHSKSKGSYSLKMDLDSINPDETEEEF 471
Query: 405 KAK---LKELLRDKSDAFNSDNPEE---DKVKLGE--PGWKERYYEEKFNAKTPEEREET 456
+ + +++ ++ +A ++ EE +K E WK YY +K T + EE
Sbjct: 472 QNRVNSIRKTIKKYQNAIIVEDKEELETEKTIYNERFERWKHEYYHDKLKFTT--DSEEK 529
Query: 457 RKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDL-KDLDQFNISFELGHPFKP 515
+D+ Y EGL WV++YYY G SW W+YP+HYAP SDL K LDQ +I F+L PF P
Sbjct: 530 VRDLAKDYVEGLQWVLYYYYRGCPSWSWYYPHHYAPRISDLVKGLDQ-DIEFDLSKPFTP 588
Query: 516 FNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFID 575
F QL+ V P S + +P +R LM D SPI DFYP + ++D NGK W+ + + F+D
Sbjct: 589 FQQLMAVLPERSKNLIPPTFRPLMYDEQSPIHDFYPAEVQLDKNGKTADWEAVVLISFVD 648
Query: 576 EARLLDEVKKIEHTLTEEEARRNSIMADMLF 606
E RL++ ++ L+ EE RN D+++
Sbjct: 649 EKRLIEAMQPYLCKLSPEEKTRNQFGKDLIY 679
>gi|341892378|gb|EGT48313.1| CBN-XRN-1 protein [Caenorhabditis brenneri]
Length = 1684
Score = 343 bits (881), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 224/607 (36%), Positives = 311/607 (51%), Gaps = 50/607 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRF +++ A + +L + E+ G +P + + FDSN ITPGT FM L
Sbjct: 94 MNQQRARRFMSARTA------QTQLDKAIEK-GEVIPTE---KRFDSNCITPGTYFMTRL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L +I + +D W+ K+ILS NVPGEGEHKIM Y+R +R YDPNTRHC+Y
Sbjct: 144 HDQLDEWIKKKSESDSHWQGRKIILSGHNVPGEGEHKIMDYIRTERAKSDYDPNTRHCMY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML + +HE HFS+LRE V N + + + +
Sbjct: 204 GLDADLIMLGIVSHEPHFSLLREEV------------------TFNTRPRKNEQKNKKPK 245
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFL 238
+ D V K + LH+ LREYL +EF + PF D+E +VDD+I M VGNDFL
Sbjct: 246 RTDSDV---KTFHLLHLSLLREYLAWEFADVKESLPFAYDMERVVDDWIMMGLLVGNDFL 302
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 298
PH+P++ I + A+ LL + YKK L GY+ + +L R E F+ + + F +
Sbjct: 303 PHLPSIHIHDDALPLLYSTYKKVLPTLDGYINESGYLNLARFEKFLAQLALNDKNSFMDK 362
Query: 299 ARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVG 358
Q A KR ++ GD E + + LVP F+ S + E G
Sbjct: 363 LEDEQFMAS--KRLPRTSQPGDSSEEASGEEELVP---FNSSDIEDNDEDDEKGTDESDG 417
Query: 359 RLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKEL-LRDKSD 417
D+ + H+ G + G + + D +EEF +L L L D
Sbjct: 418 NGDDDEAAFVSDHEEEDEVEGKSSGEELSPS----NLDALLLEEEFNDELATLALSGMDD 473
Query: 418 AFNSDNPEEDKVKLGEPGW---KERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 474
A ++N E K + + K+ YY +K K + E + Y + W +HY
Sbjct: 474 ADFANNVEACWTKTLDNQFKRHKKSYYADKLRYKNISKSE--LRAQAEGYVRAIQWNLHY 531
Query: 475 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEH 534
YY G SW WFYP+HYAPF SD++ I FEL PF PF QLL V P AS+ LP
Sbjct: 532 YYHGCVSWSWFYPHHYAPFISDVQGFADMKIEFELSKPFHPFEQLLAVLPEASADCLPRP 591
Query: 535 YRKLM-TDP-NSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTE 592
++LM +DP S I DFYP+ FE D+NGKR W+ + +PFI E RLL+ ++ LT
Sbjct: 592 LQELMSSDPAKSVIYDFYPSKFETDLNGKRNDWEAVVLIPFIAENRLLEAIESKRSRLTN 651
Query: 593 EEARRNS 599
EE RN+
Sbjct: 652 EENMRNT 658
>gi|359479538|ref|XP_002272207.2| PREDICTED: 5'-3' exoribonuclease 3-like [Vitis vinifera]
Length = 1072
Score = 343 bits (881), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 212/542 (39%), Positives = 294/542 (54%), Gaps = 43/542 (7%)
Query: 247 REGAINLLMAVYKKEFRALGGYLTD--------GSKPSLRRVEHFIQAVGSYEDRIFQKR 298
R GAI+LLM VYKKEF+ +GGY+ D GS L+RVE FI VG+YE++IF+KR
Sbjct: 405 RMGAIDLLMTVYKKEFKNIGGYMVDMERIEEKKGSFVKLKRVEKFILLVGTYEEKIFKKR 464
Query: 299 ARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVG 358
L + E + D+ + D + +R + PS + S V
Sbjct: 465 MALRDSKLRWLLCENS------DIFTNNEEDQSCNLEIGSTNRGCTSPSGKA-RSSSSVE 517
Query: 359 RLDNGKGT----SGRPHKVPRL----SSGATIGAAIVEAE-NSFETDPQENKEEFKAKLK 409
L GT + + L SS ++ +V A +F T +E K +LK
Sbjct: 518 NLGTSSGTEYLITDKSEMFALLFLKHSSARSLDLLLVNATLATFYT------KEMKKRLK 571
Query: 410 ELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLC 469
E +R KSD + S + D+V+LG PGWKERYY+EK + T + E TRK++V +YTEGL
Sbjct: 572 ENIRAKSDLWRSGSLGIDRVRLGHPGWKERYYKEKCSCDTSQGIESTRKELVQKYTEGLL 631
Query: 470 WVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSH 529
WV+ YY+ GV SW WFYPYHY PFASD K L + FE G PFKPF+QL+GV P +S+H
Sbjct: 632 WVLQYYFSGVPSWTWFYPYHYGPFASDFKGLSRVKGKFERGSPFKPFDQLMGVLPPSSAH 691
Query: 530 ALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHT 589
ALP+ Y+ LM D +S I DFY T+FEVD +GKR+ WQGI KLPFIDEARLL E +K+E
Sbjct: 692 ALPKAYQPLMIDEDSNIIDFYNTNFEVDTDGKRFIWQGICKLPFIDEARLLAETRKLEKE 751
Query: 590 LTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNG 649
L ++EA RN+ D LF+ S L YT C+ + +++ S G+NG
Sbjct: 752 LEDQEAVRNARSFDQLFLRFSDKLRL-FYTEQVSCR------KPNKTAKIDSNFSLGING 804
Query: 650 YISPCAGDPHPPVFRSPVA--SMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQ 707
YI C + + S ++E+I + V+ +Y++P+ H+ RP G IFP K +
Sbjct: 805 YI--CFDNNGLNMMNSTCLDKNLENIQEDDVISMLYEVPNGCLHIPRPLEGTIFPFKTIT 862
Query: 708 LEDLKPAPVLWHEDSGRRPHENGR-HNPHGTISGRQLGEAAHRLVANSLQHMKVDRNGYG 766
D++ +LWHE G +P R H G R +A ++ + V R G
Sbjct: 863 EADIEET-LLWHEYKGSKPPVKFRGHEGFGPAINRLKSKACGSSTISAASGLNVARAGSS 921
Query: 767 DR 768
R
Sbjct: 922 TR 923
Score = 256 bits (655), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 133/238 (55%), Positives = 164/238 (68%), Gaps = 27/238 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRF+ +KD + AEE+RLR++FE EG+ L PK +SQV D N+ITPGT FM +
Sbjct: 102 MNQQRRRRFQTAKDNEIAEAEEQRLRRQFEMEGKPLVPKQESQVSDPNIITPGTVFMHEV 161
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S ALQ YI R+ ++ GW+ +KVILSD+NVPGEGEHKIMS++RLQR+LP Y+PNT HCLY
Sbjct: 162 SKALQQYICSRMKHEAGWKDLKVILSDSNVPGEGEHKIMSFIRLQRSLPDYNPNTLHCLY 221
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIMLALATHEVHFSILRE V T Q+ +CE + K
Sbjct: 222 GLDADLIMLALATHEVHFSILREDVLTLEQR-------------GSCESAVETKTSP--- 265
Query: 181 KGDEVVVPK-KPYQFLHIWTLREYLDYEFRIPNPP---FEIDLECIVDDFIFMCFFVG 234
PK FLH+W LREYL+ + +I +PP EI+ E IVDDFIF+CFF+G
Sbjct: 266 -------PKANSSLFLHVWILREYLELDMKISDPPEKLKEINFERIVDDFIFLCFFLG 316
>gi|349578059|dbj|GAA23225.1| K7_Kem1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1528
Score = 343 bits (881), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 219/631 (34%), Positives = 336/631 (53%), Gaps = 70/631 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA E+ L++ E G ++P + FDSN ITPGTEFMA L
Sbjct: 94 MNQQRARRFRTAMDA------EKALKKAIEN-GDEIP---KGEPFDSNSITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ LQY+IH +++ND W ++++I S VPGEGEHKIM+++R ++ ++ NTRHC+Y
Sbjct: 144 TKNLQYFIHDKISNDSKWREVQIIFSGHEVPGEGEHKIMNFIRHLKSQKDFNQNTRHCIY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L+TH HF++LRE V T G++ N E K+
Sbjct: 204 GLDADLIMLGLSTHGPHFALLREEV-TFGRR--------------NSEKKS--------- 239
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFL 238
+ + + LH+ LREY++ EF+ FE + E I+DDFI + F +GNDFL
Sbjct: 240 ------LEHQNFYLLHLSLLREYMELEFKEIADEMQFEYNFERILDDFILVMFVIGNDFL 293
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 298
P++P L + +GA +L+ +K+ GY+ + K +L+R+ ++ + +E F+K
Sbjct: 294 PNLPDLHLNKGAFPVLLQTFKEALLHTDGYINEHGKINLKRLGVWLNYLSQFELLNFEKD 353
Query: 299 ---ARLHQRHAERIKRE--KAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQ 353
+ E I E + + R G + Q + + + +L SP
Sbjct: 354 DIDVEWFNKQLENISLEGERKRQRVGKKLLVKQQKKLIGSIKPWLMEQLQEKLSPD--LP 411
Query: 354 SECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAEN----SFETD-----PQENKEEF 404
E + L+ K + H +G I +++ S + D P E +EEF
Sbjct: 412 DEEIPTLELPKDLDMKDHLEFLKEFAFDLGLFITHSKSKGSYSLKMDLDSINPDETEEEF 471
Query: 405 KAK---LKELLRDKSDAFNSDNPEE---DKVKLGE--PGWKERYYEEKFNAKTPEEREET 456
+ + +++ ++ +A ++ EE +K E WK YY +K T + EE
Sbjct: 472 QNRVNSIRKTIKKYQNAIIVEDKEELETEKTIYNERFERWKHEYYHDKLKFTT--DSEEK 529
Query: 457 RKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDL-KDLDQFNISFELGHPFKP 515
+D+ Y EGL WV++YYY G SW W+YP+HYAP SDL K LDQ +I F+L PF P
Sbjct: 530 VRDLAKDYVEGLQWVLYYYYRGCPSWSWYYPHHYAPRISDLAKGLDQ-DIEFDLSKPFTP 588
Query: 516 FNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFID 575
F QL+ V P S + +P +R LM D SPI DFYP + ++D NGK W+ + + F+D
Sbjct: 589 FQQLMAVLPERSKNLIPPAFRPLMYDEQSPIHDFYPAEVQLDKNGKTADWEAVVLISFVD 648
Query: 576 EARLLDEVKKIEHTLTEEEARRNSIMADMLF 606
E RL++ ++ L+ EE RN D+++
Sbjct: 649 EKRLIEAMQPYLCKLSPEEKTRNQFGKDLIY 679
>gi|256272237|gb|EEU07228.1| Kem1p [Saccharomyces cerevisiae JAY291]
Length = 1528
Score = 343 bits (881), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 219/631 (34%), Positives = 336/631 (53%), Gaps = 70/631 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA E+ L++ E G ++P + FDSN ITPGTEFMA L
Sbjct: 94 MNQQRARRFRTAMDA------EKALKKAIEN-GDEIP---KGEPFDSNSITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ LQY+IH +++ND W ++++I S VPGEGEHKIM+++R ++ ++ NTRHC+Y
Sbjct: 144 TKNLQYFIHDKISNDSKWREVQIIFSGHEVPGEGEHKIMNFIRHLKSQKDFNQNTRHCIY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L+TH HF++LRE V T G++ N E K+
Sbjct: 204 GLDADLIMLGLSTHGPHFALLREEV-TFGRR--------------NSEKKS--------- 239
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFL 238
+ + + LH+ LREY++ EF+ FE + E I+DDFI + F +GNDFL
Sbjct: 240 ------LEHQNFYLLHLSLLREYMELEFKEIADEMQFEYNFERILDDFILVMFVIGNDFL 293
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 298
P++P L + +GA +L+ +K+ GY+ + K +L+R+ ++ + +E F+K
Sbjct: 294 PNLPDLHLNKGAFPVLLQTFKEALLHTDGYINEHGKINLKRLGVWLNYLSQFELLNFEKD 353
Query: 299 ---ARLHQRHAERIKRE--KAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQ 353
+ E I E + + R G + Q + + + +L SP
Sbjct: 354 DIDVEWFNKQLENISLEGERKRQRVGKKLLVKQQKKLIGSIKPWLMEQLQEKLSPD--LP 411
Query: 354 SECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAEN----SFETD-----PQENKEEF 404
E + L+ K + H +G I +++ S + D P E +EEF
Sbjct: 412 DEEIPTLELPKDLDMKDHLEFLKEFAFDLGLFITHSKSKGSYSLKMDLDSINPDETEEEF 471
Query: 405 KAK---LKELLRDKSDAFNSDNPEE---DKVKLGE--PGWKERYYEEKFNAKTPEEREET 456
+ + +++ ++ +A ++ EE +K E WK YY +K T + EE
Sbjct: 472 QNRVNSIRKTIKKYQNAIIVEDKEELETEKTIYNERFERWKHEYYHDKLKFTT--DSEEK 529
Query: 457 RKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDL-KDLDQFNISFELGHPFKP 515
+D+ Y EGL WV++YYY G SW W+YP+HYAP SDL K LDQ +I F+L PF P
Sbjct: 530 VRDLAKDYVEGLQWVLYYYYRGCPSWSWYYPHHYAPRISDLVKGLDQ-DIEFDLSKPFTP 588
Query: 516 FNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFID 575
F QL+ V P S + +P +R LM D SPI DFYP + ++D NGK W+ + + F+D
Sbjct: 589 FQQLMAVLPERSKNLIPPTFRPLMYDEQSPIHDFYPAEVQLDKNGKTADWEAVVLISFVD 648
Query: 576 EARLLDEVKKIEHTLTEEEARRNSIMADMLF 606
E RL++ ++ L+ EE RN D+++
Sbjct: 649 EKRLIEAMQPYLCKLSPEEKTRNQFGKDLIY 679
>gi|190407116|gb|EDV10383.1| 5'-3' exonuclease [Saccharomyces cerevisiae RM11-1a]
gi|259146337|emb|CAY79594.1| Kem1p [Saccharomyces cerevisiae EC1118]
Length = 1528
Score = 343 bits (881), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 219/631 (34%), Positives = 336/631 (53%), Gaps = 70/631 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA E+ L++ E G ++P + FDSN ITPGTEFMA L
Sbjct: 94 MNQQRARRFRTAMDA------EKALKKAIEN-GDEIP---KGEPFDSNSITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ LQY+IH +++ND W ++++I S VPGEGEHKIM+++R ++ ++ NTRHC+Y
Sbjct: 144 TKNLQYFIHDKISNDSKWREVQIIFSGHEVPGEGEHKIMNFIRHLKSQKDFNQNTRHCIY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L+TH HF++LRE V T G++ N E K+
Sbjct: 204 GLDADLIMLGLSTHGPHFALLREEV-TFGRR--------------NSEKKS--------- 239
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFL 238
+ + + LH+ LREY++ EF+ FE + E I+DDFI + F +GNDFL
Sbjct: 240 ------LEHQNFYLLHLSLLREYMELEFKEIADEMQFEYNFERILDDFILVMFVIGNDFL 293
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 298
P++P L + +GA +L+ +K+ GY+ + K +L+R+ ++ + +E F+K
Sbjct: 294 PNLPDLHLNKGAFPVLLQTFKEALLHTDGYINEHGKINLKRLGVWLNYLSQFELLNFEKD 353
Query: 299 ---ARLHQRHAERIKRE--KAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQ 353
+ E I E + + R G + Q + + + +L SP
Sbjct: 354 DIDVEWFNKQLENISLEGERKRQRVGKKLLVKQQKKLIGSIKPWLMEQLQEKLSPD--LP 411
Query: 354 SECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAEN----SFETD-----PQENKEEF 404
E + L+ K + H +G I +++ S + D P E +EEF
Sbjct: 412 DEEIPTLELPKDLDMKDHLEFLKEFAFDLGLFITHSKSKGSYSLKMDLDSINPDETEEEF 471
Query: 405 KAK---LKELLRDKSDAFNSDNPEE---DKVKLGE--PGWKERYYEEKFNAKTPEEREET 456
+ + +++ ++ +A ++ EE +K E WK YY +K T + EE
Sbjct: 472 QNRVNSIRKTIKKYQNAIIVEDKEELETEKTIYNERFERWKHEYYHDKLKFTT--DSEEK 529
Query: 457 RKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDL-KDLDQFNISFELGHPFKP 515
+D+ Y EGL WV++YYY G SW W+YP+HYAP SDL K LDQ +I F+L PF P
Sbjct: 530 VRDLAKDYVEGLQWVLYYYYRGCPSWSWYYPHHYAPRISDLVKGLDQ-DIEFDLSKPFTP 588
Query: 516 FNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFID 575
F QL+ V P S + +P +R LM D SPI DFYP + ++D NGK W+ + + F+D
Sbjct: 589 FQQLMAVLPERSKNLIPPAFRPLMYDEQSPIHDFYPAEVQLDKNGKTADWEAVVLISFVD 648
Query: 576 EARLLDEVKKIEHTLTEEEARRNSIMADMLF 606
E RL++ ++ L+ EE RN D+++
Sbjct: 649 EKRLIEAMQPYLCKLSPEEKTRNQFGKDLIY 679
>gi|449532153|ref|XP_004173047.1| PREDICTED: 5'-3' exoribonuclease 3-like, partial [Cucumis sativus]
Length = 249
Score = 343 bits (880), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 179/251 (71%), Positives = 203/251 (80%), Gaps = 18/251 (7%)
Query: 249 GAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAER 308
GAINLL+AVYKKEFRALGGYLTDGSKP+L+RVEHFIQAVGSYED+IFQKRARLHQ+ A+R
Sbjct: 1 GAINLLLAVYKKEFRALGGYLTDGSKPNLQRVEHFIQAVGSYEDKIFQKRARLHQKQADR 60
Query: 309 IKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDN------ 362
IKREK Q RRGDD EP QP SLV V+RFH SRLASGP PSPY++S VG+ +
Sbjct: 61 IKREKGQTRRGDDAEPQVQP-SLVAVARFHESRLASGPCPSPYERS-GVGKATSRFSGMN 118
Query: 363 ----------GKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELL 412
G GTS R +KV RLSSGA+IGAAIVEAENS E D +NK+E K+KLKE+L
Sbjct: 119 IKNKQSLESHGSGTSVRQNKVARLSSGASIGAAIVEAENSLEIDIDDNKKELKSKLKEVL 178
Query: 413 RDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVM 472
R+KSD FNS+ EEDK+KLG PGW+ERYY EKF+A TPEE ++ R DVVLRYTEGLCWVM
Sbjct: 179 REKSDVFNSNKSEEDKIKLGVPGWRERYYNEKFSANTPEELDDIRNDVVLRYTEGLCWVM 238
Query: 473 HYYYEGVCSWQ 483
HYYYEGVCSWQ
Sbjct: 239 HYYYEGVCSWQ 249
>gi|366992011|ref|XP_003675771.1| hypothetical protein NCAS_0C04170 [Naumovozyma castellii CBS 4309]
gi|342301636|emb|CCC69407.1| hypothetical protein NCAS_0C04170 [Naumovozyma castellii CBS 4309]
Length = 1488
Score = 343 bits (880), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 227/663 (34%), Positives = 336/663 (50%), Gaps = 74/663 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR + DA E Q+ G ++P + FDSN ITPGTEFMA L
Sbjct: 94 MNQQRSRRFRTAMDA-------EHALQKAIDHGEEIPK---GEPFDSNSITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+IH +++ND W +I +I S VPGEGEHKIM ++R +D NTRHC+Y
Sbjct: 144 TKNLKYFIHDKISNDAKWREIDIIFSGHEVPGEGEHKIMDFIRRITAEKDFDENTRHCIY 203
Query: 121 GLDADLIMLALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADLI+L L+TH HF++LR EVVF +K
Sbjct: 204 GLDADLIILGLSTHAPHFALLREEVVFGRRNSNKV------------------------- 238
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDF 237
+ + + LH+ LREY++ EF F D E ++DDFI + F +GNDF
Sbjct: 239 -----KTLENQNFYLLHLSLLREYMELEFSEIADEMQFPFDFERVLDDFILVMFVIGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
LP++P L + +GA +++ +K+ L GY+ + K +L R+ + Q + +E F+K
Sbjct: 294 LPNLPDLHLNKGAFPVILQTFKEALLHLDGYINEHGKINLERLRVWFQYLSQFELLNFEK 353
Query: 298 R---ARLHQRHAERIKR--EKAQARRGDDVEP--------LAQPDSLVPVSRFHGSRLAS 344
+ E I E+ +AR G + + +P + +S + L
Sbjct: 354 SDIDVEWFNQQLENISLEGERKRARMGKKLLIKQQKKIVGMVKPWIMKELSVKIPTDLPE 413
Query: 345 GPSPS-PYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEE 403
PS +Q V LD K + S + V+ ++ ++ +E +++
Sbjct: 414 DQVPSLTIKQENIVENLDFLKKFAFDLGLFVVHSKSKDTYSLRVDLDSINPSETEEERQK 473
Query: 404 FKAKLKELLRDKSDAF---NSDNPEEDKVKLGE--PGWKERYYEEKFNAKTPEEREETRK 458
A L+++++ A ++D E++K E WK YY++K KT +EE+
Sbjct: 474 RVAGLRKIIKSYQQAVLVEDADELEKEKGLYDERFENWKHDYYKDKLGFKT--NQEESVV 531
Query: 459 DVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDL-KDLDQFNISFELGHPFKPFN 517
+ Y EGL WV++YYY G SW W+Y YHYAP SDL K LDQ I F+ G PF PF
Sbjct: 532 SLTNNYVEGLQWVLYYYYRGCPSWGWYYHYHYAPRISDLEKGLDQI-IKFDKGRPFTPFE 590
Query: 518 QLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEA 577
QL+ V P S + +P R LM D SPI DFYP++ ++DMNGK W+ + L F+DE
Sbjct: 591 QLMAVLPERSKNLIPPALRPLMYDEKSPIIDFYPSEVKLDMNGKTADWEAVVLLSFVDEK 650
Query: 578 RLLDEVKKIEHTLTEEEARRNSIMADMLFV-------LLSHPLSASIYTLD-EHCKQLKI 629
RL++ +K T EE RNS + F+ + PLS L+ +HC + +
Sbjct: 651 RLVEAMKPYLSKFTPEEKLRNSFGTSLKFIFNQQVDTIYKSPLSGIFSDLEHDHCVEREF 710
Query: 630 KER 632
E+
Sbjct: 711 VEK 713
>gi|367000872|ref|XP_003685171.1| hypothetical protein TPHA_0D00960 [Tetrapisispora phaffii CBS 4417]
gi|357523469|emb|CCE62737.1| hypothetical protein TPHA_0D00960 [Tetrapisispora phaffii CBS 4417]
Length = 1313
Score = 343 bits (880), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 213/619 (34%), Positives = 315/619 (50%), Gaps = 62/619 (10%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRR R + DA + + E E + P FD N ITPGTEFMA L
Sbjct: 96 MNQQRSRRIRTAMDAEKAIDAMKNAIGE-ENWDSSMEP------FDKNSITPGTEFMAQL 148
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+I L+Y+IH + ND W ++VI S VPGEGEHKIM Y+R ++ YDPN+RHC+Y
Sbjct: 149 TINLKYFIHEKKTNDSNWRDVQVIFSGHEVPGEGEHKIMDYIRKLKSQRDYDPNSRHCIY 208
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLI+L L+TH H ++LRE + + G+ + A E +
Sbjct: 209 GSDADLIILGLSTHIPHLAVLREEM----------IFGRKKDIRAGLEAQN--------- 249
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFL 238
+ LH+ LREYL+ EF F+ D E I+DDF+ + F +GNDFL
Sbjct: 250 -----------FLLLHMSILREYLELEFEDLKTKLSFKYDFERIIDDFVLILFVIGNDFL 298
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 298
P++P L + +GA +++ +KK +L Y+ +L R+ ++ + +E F+++
Sbjct: 299 PNLPDLHLNKGAFPVILETFKKALMSLDSYINFNGTINLERLGVWLDYLSHFEFMNFKQK 358
Query: 299 ARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVG 358
Q E++ + + +D L + +L+ S H SP S +
Sbjct: 359 VFTVQWFNEQLNKIPTINKNVNDQNDLQKKLNLIN-SMLHWVTKMDTEILSP--SSFAIN 415
Query: 359 RLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEE--FKAKLKELL---- 412
R + H +LS G + ++EN + Q + K+ L ELL
Sbjct: 416 R----EQIKDIYHFFNKLSEGYGFEISKDQSENYIISKTQNANDVNYIKSSLTELLICYE 471
Query: 413 -----RDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEG 467
++K+ + D EDK K WK+ YY+ K E+ R ++ Y EG
Sbjct: 472 DLIKDQNKTKSNVQDIYNEDKFK----SWKQNYYKSKLEFSETSYGEDLR-NLTANYVEG 526
Query: 468 LCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSAS 527
L WV+ YYY+ SW W+Y YHYAP SDL+D + I F+ PF PF QL+ V PS S
Sbjct: 527 LQWVLDYYYKECPSWSWYYKYHYAPRISDLRDGLKQRIVFDQDEPFTPFQQLMAVLPSRS 586
Query: 528 SHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIE 587
S +P +R LM DP+SPI DFYPT + D NGK W+ + + F+D+ RL++ +K
Sbjct: 587 SKLIPSIFRPLMLDPSSPIIDFYPTTVKFDKNGKAADWEAVVLISFVDQDRLINAMKPFL 646
Query: 588 HTLTEEEARRNSIMADMLF 606
+ LT EEA RN+ ++++F
Sbjct: 647 NLLTPEEASRNAHGSNIMF 665
>gi|241950323|ref|XP_002417884.1| 5'-3' exoribonuclease, DNA strand transfer protein beta, putative
[Candida dubliniensis CD36]
gi|223641222|emb|CAX45602.1| 5'-3' exoribonuclease, DNA strand transfer protein beta, putative
[Candida dubliniensis CD36]
Length = 1487
Score = 343 bits (879), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 236/643 (36%), Positives = 332/643 (51%), Gaps = 96/643 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + +A E L++ E G ++P K D FDSN ITPGTEFMA L
Sbjct: 58 MNQQRARRFRTAYEA------EINLKKAIEN-GEEIP-KEDP--FDSNSITPGTEFMAKL 107
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+IH ++ D W I+++LS VPGEGEHKIM Y+R R+ Y+PN RHC+Y
Sbjct: 108 TNNLKYFIHKKITEDSSWANIEIVLSGHEVPGEGEHKIMEYIRSIRSQDDYNPNLRHCIY 167
Query: 121 GLDADLIMLALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADLIML L TH+ HF++LR EV F P +RK G D
Sbjct: 168 GLDADLIMLGLVTHDPHFALLREEVTFGP-----------------------QRKIGPKD 204
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFR-IPNP-PFEIDLECIVDDFIFMCFFVGNDF 237
+ + + LH+ LREYL EF+ I N FE D + I+DDFI + + +GNDF
Sbjct: 205 -------LHDQKFYLLHLSLLREYLSLEFQEIENQLNFEYDFDKILDDFILIMYVIGNDF 257
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
LP++P L I +GA LL+A +K+ GY+ + K +L R+ +I+ + +E F+K
Sbjct: 258 LPNLPDLFINKGAFPLLIAAFKQTLLDSDGYINENGKINLVRLNIYIKFLSKFEFENFEK 317
Query: 298 RARLHQRHAER-----IKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQ 352
+ ++ I EK + R G + L + LV F L S S
Sbjct: 318 YEVDVEWFNKKLDDISISGEKKRQRIG-KLLILKEQKKLVG---FIKPWLMEWASQSI-- 371
Query: 353 QSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKL---- 408
+E + GK + +K + I +EA F + + ++AKL
Sbjct: 372 -NEILNLDQQGKLPTLHLNKEDVEKNLDFIKEFAIEA--GFLIIHHQTNDIYEAKLDIDG 428
Query: 409 -------------KELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFN--------- 446
LR + S N E++ L E ++ Y EKF
Sbjct: 429 ISPNETEEEHEERITELRKTIKQYQSANLIENEEVLNET---KQVYSEKFQSWKNDYYQS 485
Query: 447 ----AKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASD----LK 498
+ EE + ++ Y EGL WV++YYY G SW W+Y YHYAP SD L+
Sbjct: 486 KLHFSIDTEEGKNKLIELTKHYIEGLQWVLYYYYRGCPSWNWYYKYHYAPRISDISLGLE 545
Query: 499 DL--DQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEV 556
+L ++ ++FEL HPFKPF QL+ V P+ S +P YR LMTD SPI +FYP + E+
Sbjct: 546 ELINEKIELNFELSHPFKPFEQLMAVLPARSKKLMPVVYRPLMTDEKSPIINFYPHEVEI 605
Query: 557 DMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 599
DMNGK SW+ + L F+DE +L++ +K IE LT EE +RNS
Sbjct: 606 DMNGKTASWEAVVLLDFVDEKKLIEALKPIESKLTFEEKQRNS 648
>gi|194762996|ref|XP_001963620.1| GF20490 [Drosophila ananassae]
gi|190629279|gb|EDV44696.1| GF20490 [Drosophila ananassae]
Length = 1605
Score = 342 bits (878), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 209/601 (34%), Positives = 304/601 (50%), Gaps = 124/601 (20%)
Query: 1 MNQQRSRRFRASKDA--ADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMA 58
MNQQRSRRFR+S++A +S A + R+E ER FDSN ITPGTEFM
Sbjct: 94 MNQQRSRRFRSSREAEQMESKALQRGERREHER-------------FDSNCITPGTEFMQ 140
Query: 59 VLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHC 118
L + L+ ++ +++ DP W++ VILS PGEGEHKIM Y+R + P +DPNTRHC
Sbjct: 141 RLQVRLRAFLQTKISTDPLWQRCSVILSGQETPGEGEHKIMDYIRFMKAQPDFDPNTRHC 200
Query: 119 LYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEF 178
LYGLDADLI+L L THE+HF +LRE V +F
Sbjct: 201 LYGLDADLIILGLCTHELHFVVLREEV-------------------------------KF 229
Query: 179 DEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNP-PFEIDLECIVDDFIFMCFFVGNDF 237
V + + LH+ LREYL+ EF N ++D+ ++DD++ M F VGNDF
Sbjct: 230 GRNVKRTSVEETRFFLLHLGLLREYLELEFDDLNTDEHKLDVAQLIDDWVLMGFMVGNDF 289
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL + Y K + LGG + + K +L+R++ F+ A+ E F++
Sbjct: 290 IPHLPCLHISSNALPLLYSTYIKIYPKLGGNINENGKLNLQRLQVFLTALTEVELEQFKE 349
Query: 298 RARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECV 357
HA+ +K A+ D V VS G+
Sbjct: 350 -------HADDLKYMNAKTEAFD-----------VDVSEITGTE---------------- 375
Query: 358 GRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSD 417
S + + A I + +E D E+ + A L ++
Sbjct: 376 -------------------SYDSDLAALIDNSMKLYEGDSDEDLCDEAASLMHEFQN--- 413
Query: 418 AFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYE 477
+K YY KF + +P++ E ++ Y L W++ YYY
Sbjct: 414 ------------------YKRNYYCTKFKSDSPDQLIE---ELSYHYVTALQWILDYYYR 452
Query: 478 GVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRK 537
GV SW W+YP+HYAPF SD++++++ ++F LG PF PF QLL V PSAS +P +
Sbjct: 453 GVQSWDWYYPFHYAPFISDIRNVEKVKVNFHLGEPFFPFQQLLAVLPSASFKLMPTAFHD 512
Query: 538 LMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARR 597
LM +P SP+++F+P DFE D+NGK++ W+ + +PFIDE RLL+ + E L+E E R
Sbjct: 513 LMLNPESPLAEFFPVDFESDLNGKKHDWEAVVLIPFIDEKRLLNAMVPCELRLSEAEKER 572
Query: 598 N 598
N
Sbjct: 573 N 573
>gi|308480687|ref|XP_003102550.1| CRE-XRN-1 protein [Caenorhabditis remanei]
gi|308261282|gb|EFP05235.1| CRE-XRN-1 protein [Caenorhabditis remanei]
Length = 1668
Score = 342 bits (877), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 225/612 (36%), Positives = 316/612 (51%), Gaps = 63/612 (10%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRF +++ A+S E+ G LP + + FDSN ITPGT FM L
Sbjct: 94 MNQQRARRFMSAR-TANSQMEKAIAN------GEILPTE---KRFDSNCITPGTYFMTRL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L +I + +D W+ K+ILS NVPGEGEHKIM ++R +R GYDPNTRHC+Y
Sbjct: 144 HNKLDEWIKKKSASDSHWQGRKIILSGHNVPGEGEHKIMDFIRTERAKSGYDPNTRHCMY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML + +HE HFS+LRE V N + + + +
Sbjct: 204 GLDADLIMLGIVSHEPHFSLLREEV------------------TFNSRPRKNEQKNKKPK 245
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFL 238
+ D V K + LH+ LREYL +EF + PF D+E IVDD+I M VGNDFL
Sbjct: 246 RTDSDV---KTFHLLHLSLLREYLAWEFADVKESLPFAYDMERIVDDWIMMGLLVGNDFL 302
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 298
PH+P++ I + A+ LL + YKK L GY+ + +L R E F++ + + F +
Sbjct: 303 PHLPSIHIHDDALPLLYSTYKKVLPTLDGYINESGYLNLARFEKFLEQLSLNDKNSFMDK 362
Query: 299 ARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVG 358
Q ++ +K + + D + + + LV F S + S +++E
Sbjct: 363 LEDEQ----FMESKKLRPSQNDIFQEASVEEELVA---FESSDIESDAEDKDDEKNETDE 415
Query: 359 RLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKEL-LRDKSD 417
D+ H+ S G + +ENS D +EEF +L L L D
Sbjct: 416 NGDDDAAFVS-DHEEENESEDKLSGKEL-SSENS---DDVLLEEEFNDELATLALSGMDD 470
Query: 418 AFNSDNPEEDKVKLGEPGW---KERYYEEKFNAKTPEEREETRKDVVLR-----YTEGLC 469
A ++N E K + + K+ YY K K + E LR Y +
Sbjct: 471 ADFANNVEACWTKTLDNQFKRHKKSYYSNKLRYKNISKTE-------LRAQAEGYVRAIQ 523
Query: 470 WVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSH 529
W +HYYY G SW WFYP+HYAPF SD++ I FEL PF PF QLL V P AS+
Sbjct: 524 WNLHYYYHGCVSWSWFYPHHYAPFISDVRGFANMKIEFELSQPFHPFEQLLAVLPEASAD 583
Query: 530 ALPEHYRKLM-TDPN-SPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIE 587
LP+ ++LM +DP S I DFYP +FE D+NGKR W+ + +PFI+E RLL+ ++
Sbjct: 584 CLPKPLQELMSSDPTKSMIHDFYPANFETDLNGKRNDWEAVVLIPFIEEKRLLEAIESKR 643
Query: 588 HTLTEEEARRNS 599
+ L+ EE RN+
Sbjct: 644 NRLSREENMRNT 655
>gi|401842124|gb|EJT44395.1| XRN1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 1526
Score = 341 bits (875), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 226/668 (33%), Positives = 348/668 (52%), Gaps = 81/668 (12%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA E+ +++ E G ++P + FDSN ITPGTEFMA L
Sbjct: 94 MNQQRARRFRTAMDA------EKAMKKAIEN-GDEIP---KGEPFDSNSITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ LQY+IH +++ND W ++++I S VPGEGEHKIM+++R ++ ++ NTRHC+Y
Sbjct: 144 TKNLQYFIHDKISNDSKWREVQIIFSGHEVPGEGEHKIMNFIRHLKSQKDFNQNTRHCIY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L+TH HF++LRE V T G++ N E K+
Sbjct: 204 GLDADLIMLGLSTHGPHFALLREEV-TFGRR--------------NSEKKS--------- 239
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFL 238
+ + + LH+ LREY++ EF+ FE D E I+DDFI + F +GNDFL
Sbjct: 240 ------LEHQNFYLLHLSLLREYMELEFKEIADEMRFEYDFERILDDFILVMFVIGNDFL 293
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 298
P++P L + +GA +L+ +K+ GY+ + K +L+R+ ++ + +E F+K
Sbjct: 294 PNLPDLHLNKGAFPVLLQTFKEALLHTDGYINEHGKINLKRLGVWLDYLSQFELLNFEKE 353
Query: 299 ---ARLHQRHAERIKR--EKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQ 353
+ E I E+ + R G + Q + + + +L SP
Sbjct: 354 DIDVEWFNKQLENISLDGERKRQRVGKKLLVKQQKKLIGSIKPWLMEQLQGKISPD--LP 411
Query: 354 SECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIV--EAENSF-------ETDPQENKEEF 404
E + L+ + + H +G I +++N++ +P E EEF
Sbjct: 412 DEKIPTLELPRDLDIKDHLEFLKEFAFDLGLFITHSKSKNTYSLKLDLDSINPDETDEEF 471
Query: 405 KAKL---KELLRDKSDAFNSDNPEE---DKVKLGE--PGWKERYYEEKFNAKTPEEREET 456
+ ++ ++ ++ +A ++ EE +K E WK YY +K K + EE
Sbjct: 472 QNRVNSTRKTIKKYQNAIIVEDKEELETEKTIYNERFEHWKHEYYRDKL--KYASDCEER 529
Query: 457 RKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDL-KDLDQFNISFELGHPFKP 515
D+ Y EGL WV++YYY G SW W+YP+HYAP SDL K LDQ +I F+L PF P
Sbjct: 530 VTDLSKDYVEGLQWVLYYYYRGCPSWSWYYPHHYAPRISDLVKGLDQ-DIEFDLSKPFTP 588
Query: 516 FNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFID 575
F QL+ V P S + +P +R LM D SPI DFYP + ++D NGK W+ + + F+D
Sbjct: 589 FQQLMAVLPERSKNLIPPAFRPLMYDEQSPIHDFYPAEVQLDKNGKTADWEAVVLISFVD 648
Query: 576 EARLLDEVKKIEHTLTEEEARRNSIMADMLF-------VLLSHPLSASIYTLD-EHCKQL 627
E RL++ ++ L+ EE RN D+++ V+ PL ++ HC +
Sbjct: 649 EKRLIEAMQPYLSKLSPEEKTRNQFGKDLIYSFNPQVDVIYKSPLGGIFSDIEHNHCVE- 707
Query: 628 KIKERVEV 635
KE V V
Sbjct: 708 --KEYVTV 713
>gi|388851631|emb|CCF54627.1| probable KEM1-multifunctional nuclease [Ustilago hordei]
Length = 1481
Score = 341 bits (875), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 231/658 (35%), Positives = 322/658 (48%), Gaps = 106/658 (16%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR +K+A + ++++ ER G LP + + FDSN ITPGT FMA L
Sbjct: 94 MNQQRSRRFRTAKEA-------KEIKEKAERRGEVLP---EEEAFDSNCITPGTPFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S L+Y+I ++ D W ++VILS +VPGEGEHKIM Y+RL + P Y+PN RHCLY
Sbjct: 144 SQQLEYFIAKKITEDADWRNVQVILSAHDVPGEGEHKIMEYIRLCKAQPDYNPNVRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADLIML L +H+ HF +LRE V F P ++ K L Q
Sbjct: 204 GLDADLIMLGLLSHDPHFCLLREEVQFGPRRKSKGSLESQN------------------- 244
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
+ LH+ REYLD EF+ + PF D E I+DDFI + FVGNDF
Sbjct: 245 ------------FFLLHLSLFREYLDLEFQDLRSSLPFTYDFERIIDDFILLDIFVGNDF 292
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
LPH+P L I EGAI+LL ++YK+ GGYL + R+E + + +E F++
Sbjct: 293 LPHLPGLHINEGAIDLLFSIYKQILPVAGGYLNESGNLRTDRLELVLAELCKFEMEQFER 352
Query: 298 RARLHQRHAERIKREK---AQAR-RGDDVEPLAQPDSLVPVSRFHGSRL---------AS 344
H +I + K QA+ +G V +Q D V F +R
Sbjct: 353 DYGDTATHKAKISKNKKAITQAKAKGGLVLTKSQRDLFNKVHAFVMARRHDPAGAPEELL 412
Query: 345 GPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLS-------SGATIGAAIVEAENSFETDP 397
P+ P + + L + +K+ +S S I A ++++ +
Sbjct: 413 VPADLPNKDKRFLEDLASSLKLRASFNKIDPISQQPAITLSFPAIAAEDDDSDDGPSDED 472
Query: 398 QENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKT-----PEE 452
++ EE A N P + + + RY + K + + PEE
Sbjct: 473 GDDSEEDSDDESPSPSADEGARNKSIPAQSEANVAVDRVLNRYLKAKVDNASDDEADPEE 532
Query: 453 REETRKDVVLRYTEGLCWVMHYYYEG------------------VCSWQWFYPYH----- 489
+ R DV + W YY E + QW Y+
Sbjct: 533 DYKKRLDVQMT-----AWKKDYYKEKLEIDYSDDEAMGKLAFRYIEGLQWVLHYYYDGVA 587
Query: 490 ---------YAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMT 540
YAP SDLK++ + FELG PF+PF+QL+GV P+ S+ +P +R LMT
Sbjct: 588 SWGWFYDYHYAPKISDLKNVGEMKFEFELGKPFRPFDQLMGVLPALSNQHIPFAFRDLMT 647
Query: 541 DPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
DPNSPI DFYP++FE D+NGK+ W+ + K+PFIDE RLLD + K E L EE +RN
Sbjct: 648 DPNSPIIDFYPSNFEADLNGKKQDWEAVVKIPFIDEKRLLDALNKREIYLGIEERKRN 705
>gi|328865681|gb|EGG14067.1| 5'-3' exoribonuclease [Dictyostelium fasciculatum]
Length = 1157
Score = 341 bits (875), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 251/732 (34%), Positives = 363/732 (49%), Gaps = 111/732 (15%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQV----------FDSNVI 50
MNQQR+RRFRA+ D+ +E+ R ER + D FDSN I
Sbjct: 108 MNQQRARRFRAALDS--RITKEQAARDLIERLNNGSLSQEDYDAIQKDGAEKYHFDSNCI 165
Query: 51 TPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPG 110
TPGTEFMA++++ L+ Y+ +++ DP W+ +KVI+SDA+VPGEGEHKIM Y+R QR+ P
Sbjct: 166 TPGTEFMALVALTLRQYVAEKISTDPAWKDVKVIISDASVPGEGEHKIMEYIRHQRSQPD 225
Query: 111 YDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGK 170
Y+PN +H +YGLDADLIMLAL+THEV+F ILRE + P K G P +
Sbjct: 226 YNPNLKHVMYGLDADLIMLALSTHEVNFDILREFIAPP----KGNRFGTPAPTPS----- 276
Query: 171 AKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMC 230
K + DE D +V K YQ L++ LREYLD E + NPPFE ++E I+DDFIF+C
Sbjct: 277 ---KDVDEDEVKDFLV---KDYQLLNLAILREYLDTELKC-NPPFEYNVERIIDDFIFIC 329
Query: 231 FFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSY 290
FFVGNDFLPH+P+L+I EGAI+ LM +YK+ GYLTD + L R+ +
Sbjct: 330 FFVGNDFLPHLPSLQINEGAIDRLMRIYKELLPTFEGYLTDNGEIDLDRLRKVFVRLSRE 389
Query: 291 EDRIFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSP 350
E+ I +R + +R A+ Q R D + VS H AS S
Sbjct: 390 EEDILLRRKKKEERFAQGRNNRFQQTARTDITGTASSQQLNTQVSERHKQAAASILS-DI 448
Query: 351 YQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKE 410
+Q +N P K + + AA EN + + K++ A +E
Sbjct: 449 FQPVAADTEENN-------PKKKVKTDHLSNKDAAQQLRENLAKATSKGTKDQLDATNRE 501
Query: 411 ---LLRDKSDAFNS-----------DNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREET 456
LL+ K +N PE + K +++ E +A ++
Sbjct: 502 AAALLQQKMSKYNEKKRVVKVIDIQQTPEAAETKDDNTKKRKKKETEDKSAAEDQDDSLE 561
Query: 457 RKDVVLRY------TEGLCWVMHYY-------------YEGVC-------SWQWFYPYH- 489
+K + + +EG W YY +C +W Y +H
Sbjct: 562 KKLFIHKMKDVNIGSEG--WRTRYYEHHFETEQPQNELVRAICQSYVDGLAWVLRYYFHG 619
Query: 490 -----------YAPFASDLKDLDQFNIS--FELGHPFKPFNQLLGVFPSASSHALPEHYR 536
YAPF DL + + FELG PF+PF QL+ V P AS +P+ YR
Sbjct: 620 CCSWGWYYPYHYAPFILDLAENGSMIVEPQFELGAPFRPFQQLMSVLPKASGQFVPKPYR 679
Query: 537 KLM------TDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTL 590
+M D N I FYP +F +D+ + +W+G+ +LPFIDE LL +K ++++L
Sbjct: 680 TMMGISIDGEDRNDVILHFYPNEFLIDVAPGQPTWKGVCQLPFIDENELLSALKPLDNSL 739
Query: 591 TEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVE---------VKERLNP 641
TE+EA RNS D+ ++SH S SI + + + L+ +++ V++RL P
Sbjct: 740 TEDEAFRNSHGTDL---IISHN-STSIGSTTDLPRNLEKPDQILGTISPVIPGVEKRLPP 795
Query: 642 ELSDGMNGYISP 653
LS + Y +P
Sbjct: 796 LLSAKVFTYKNP 807
>gi|363756508|ref|XP_003648470.1| hypothetical protein Ecym_8383 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891670|gb|AET41653.1| Hypothetical protein Ecym_8383 [Eremothecium cymbalariae
DBVPG#7215]
Length = 1479
Score = 339 bits (870), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 221/635 (34%), Positives = 319/635 (50%), Gaps = 75/635 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR + DA E+ L++ E G ++P + FDSN ITPGTEFMA L
Sbjct: 94 MNQQRSRRFRTAMDA------EKALKKAIE-NGEEIP---SGEPFDSNCITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+IH ++++D W + VILS VPGEGEHKIM ++R+ R+ Y+PNTRHC+Y
Sbjct: 144 TKNLKYFIHEKISSDSLWRQANVILSGHEVPGEGEHKIMEHIRILRSQKDYNPNTRHCIY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLI+L L+ H+ HF++LRE V F +
Sbjct: 204 GLDADLIILGLSVHDSHFALLREEVL-------------------------------FGK 232
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEF-RIPNP-PFEIDLECIVDDFIFMCFFVGNDFL 238
+ + ++ + LHI LREYL+ EF + N FE D E ++DDFI + F +GNDFL
Sbjct: 233 NHNSKPLEQQNFFLLHISILREYLELEFAELENELMFEYDFERLLDDFILVLFVIGNDFL 292
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 298
P++P L + +GA +L+ +K+ R + GY+ + + R +++ + +E F++
Sbjct: 293 PNLPDLHLNKGAFPVLLQTFKEALRHMDGYMNECGTINFSRFSIWLEYLSKFEKANFERS 352
Query: 299 ---ARLHQRHAERIKREKAQAR----------RGDDVEPLAQPDSLVPVSRFHGSRLASG 345
+ E I E A+ R R + +P L V + ++
Sbjct: 353 DIDIEWFNQQLENISLEGARKRVKSGKKLLLKRQRQIVGAVKPWLLKTVEEKLSANVSDA 412
Query: 346 P---SPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKE 402
SP P +D K + + V S V+ + SF + E E
Sbjct: 413 DITLSP-PLAGHLVANNIDFLKELAFELYLVVVHSQSQDTYTFKVDLD-SFNLNASE--E 468
Query: 403 EFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPG---------WKERYYEEKFNAKTPEER 453
E K++L L R F +D+ +L E WK+ YY+EK ++
Sbjct: 469 EHKSRLSNL-RRSIKIFEQATIVDDEEELEEKMEIYDDRFNQWKDAYYKEKLGFSYYDD- 526
Query: 454 EETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPF 513
E K+ Y EGL WV++YYY+G SW W+Y YHYAP SD+ ISFE PF
Sbjct: 527 -EKLKEQTENYVEGLQWVLYYYYQGCPSWSWYYKYHYAPRISDIIKGINKKISFEKNRPF 585
Query: 514 KPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPF 573
PF QL+ V P S + +P YR LM D SPI DFYP D E+D NGK W+ + K+ F
Sbjct: 586 TPFQQLMSVLPKRSKNLIPPVYRPLMYDEKSPILDFYPNDVELDKNGKTADWEAVVKISF 645
Query: 574 IDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVL 608
+D RL+ + + L +EE RN D+LF
Sbjct: 646 VDAERLIKVMAPYDEKLNQEEKDRNRFGTDILFCF 680
>gi|156845531|ref|XP_001645656.1| hypothetical protein Kpol_541p40 [Vanderwaltozyma polyspora DSM
70294]
gi|156116322|gb|EDO17798.1| hypothetical protein Kpol_541p40 [Vanderwaltozyma polyspora DSM
70294]
Length = 1521
Score = 338 bits (868), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 226/668 (33%), Positives = 342/668 (51%), Gaps = 98/668 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR++ DA E +++ E G +LP + FD+N ITPGTEFMA L
Sbjct: 95 MNQQRSRRFRSAMDA------ENAMKKAIEN-GDELP---KGEPFDTNSITPGTEFMAKL 144
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ ++Y+IH ++++D W I++I S VPGEGEHKIM ++R R+L YDPNTRHC+Y
Sbjct: 145 TKNIKYFIHNKISSDSNWRNIEIIFSGHEVPGEGEHKIMDFIRSIRSLDTYDPNTRHCIY 204
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L+TH+ HF++LRE V Q++ L+A
Sbjct: 205 GLDADLIMLGLSTHDPHFALLREEVRFGNQRN----SSNNSTLSA--------------- 245
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFL 238
+ K+ + LH+ LR+YL+ EF+ F+ D E ++DDFI + F +GNDFL
Sbjct: 246 ------LDKQNFYLLHLSLLRQYLNLEFKEVADGINFKYDFEKVLDDFILIMFVIGNDFL 299
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK- 297
P++P L + +GA +++ +K+ L G++ + K +L+R+ ++ + +E F+K
Sbjct: 300 PNLPDLHLNKGAFPVILQTFKEALLHLDGHINENGKINLQRLSVWLNYLSQFELMNFEKD 359
Query: 298 --RARLHQRHAERIKREKAQAR-RGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQS 354
+ E I E + R R V L Q +V + + +L + P +
Sbjct: 360 DIDVEWFNKQLENISLEGERKRIRQGKVLLLKQQKKIVGLVKPWLLKLNAKPISDLSKVD 419
Query: 355 ECVGRLD-NGKGTSGRPHKVPRLSSGATIGAAIVEAEN----SFETD-----PQENKEEF 404
E L+ N + + S +G I+ +++ S + D P E +EE
Sbjct: 420 EKALVLELNDQPIVENLDFLKEFS--FELGLFIIHSKSKDTYSLKLDIDSINPSETEEEH 477
Query: 405 KAKLKEL---LRDKSDAFNSDNPEE---DKVKLGE--PGWKERYYEEKFN---------- 446
++K + + S+A ++ EE ++ E WK YY+EKFN
Sbjct: 478 IERIKSMKVTFKKFSNAILVEDQEELDTEQEIYNERFENWKTDYYKEKFNFFQKERVLKP 537
Query: 447 ----AKTPEEREETRK---------------------DVVLRYTEGLCWVMHYYYEGVCS 481
++T E+ E + + ++ Y EGL WV++YYY G S
Sbjct: 538 FSDSSETNEQEEHSIESEFIDRPKFEYIITDDENKLTELCKNYVEGLQWVLYYYYRGCPS 597
Query: 482 WQWFYPYHYAPFASDL-KDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMT 540
W W+Y YHYAP SDL + LDQ SF+L +PF PF QL+ V P S + +P R LM
Sbjct: 598 WNWYYKYHYAPRISDLTRGLDQ-TTSFDLSNPFTPFEQLMAVLPERSKNLIPPVLRPLMY 656
Query: 541 DPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSI 600
+ SPI D YP + E+D NGK W+ + LPF+DE RL+D +K L+ EE RN
Sbjct: 657 EEISPILDLYPNEVELDKNGKTADWEAVVLLPFVDENRLIDAMKPHLAKLSPEEKERNQF 716
Query: 601 MADMLFVL 608
D+ F+
Sbjct: 717 GKDLTFMF 724
>gi|308805434|ref|XP_003080029.1| putative 5-3 exoribonuclease (ISS) [Ostreococcus tauri]
gi|116058488|emb|CAL53677.1| putative 5-3 exoribonuclease (ISS) [Ostreococcus tauri]
Length = 1057
Score = 338 bits (868), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 211/452 (46%), Positives = 269/452 (59%), Gaps = 39/452 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+++A + A EEE+LR++ REG K+ PK +S VFDSNVITPGT FM L
Sbjct: 111 MNQQRSRRFRAAQEAKEKAMEEEKLREKLTREGVKVQPKVESGVFDSNVITPGTPFMGRL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S AL+YY+H RLNNDPGW I+VI SDA+VPGEGEHK M Y+R QR LPG +PNTRH +Y
Sbjct: 171 SEALKYYVHDRLNNDPGWRGIEVIFSDASVPGEGEHKAMHYIRQQRGLPGANPNTRHVVY 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML LATHE HF ILRE+VF ++D P L E K+
Sbjct: 231 GLDADLIMLGLATHEPHFWILRELVFQ--KKD----TNAPQTLGMGTEETKKK------- 277
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNP-PFEIDLECIVDDFIFMCFFVGNDFLP 239
V + +KPYQ L + LREYL E R P PF++D E + DDFIFMCFFVGNDFLP
Sbjct: 278 ----VAIARKPYQLLSVSVLREYLALELRPVAPTPFKLDPERLFDDFIFMCFFVGNDFLP 333
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H PTLEIREGAI+LLM +Y+ LGGYL +P+L VE+F+Q V +ED IFQKRA
Sbjct: 334 HSPTLEIREGAIDLLMTLYRNLLPTLGGYLCADGRPNLPVVENFVQVVAQHEDAIFQKRA 393
Query: 300 RLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFH--GSRLASGPSPSPYQQSECV 357
+ + R REK +A+ D + A ++ P + + GS+LAS +P+ Q +
Sbjct: 394 KKEAQMRSRRHREKQKAKDYYDRQRQAS-GTVGPSNSYALGGSKLASDRAPAAPDQLVAL 452
Query: 358 GRL--------------DNGKGTSGRPHKVPRLSSGATIGAAIVEAENS----FETDPQE 399
GR +N ++ A A V E++ +T E
Sbjct: 453 GRGRAPPPPPAKNKTAEENKSAADALRERLKARGKRAAEATADVTTEDADAKKAKTAEGE 512
Query: 400 NKEEFKAKLKELLRDKSDAFNSDNPEEDKVKL 431
+KE+ KAK KE + A E+ + L
Sbjct: 513 DKEDAKAKAKEFWSELEQATTEAEKEDSESTL 544
Score = 296 bits (757), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 152/343 (44%), Positives = 211/343 (61%), Gaps = 16/343 (4%)
Query: 393 FETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEE 452
F+ + + + F +L+ ++++ D + D ++LGE GWK+RYYE K A TP+
Sbjct: 600 FKAGEEMDSKSFLKQLEGIVKNLGD---REGESPDTIRLGESGWKDRYYEAKMKA-TPQT 655
Query: 453 REETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHP 512
RE+ + +V+ Y GL WV YY+EG CSW WFYPYHYAPFASDL +L + FELG P
Sbjct: 656 REQIARGMVVEYVRGLIWVCRYYFEGCCSWGWFYPYHYAPFASDLTNLAGISTDFELGKP 715
Query: 513 FKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLP 572
FKPF+QL+GV P+ASSHALP Y LM+D +SPI DFYP DF++DMNGKR++WQ +A LP
Sbjct: 716 FKPFSQLMGVLPAASSHALPAAYAPLMSDKDSPIIDFYPEDFDLDMNGKRFTWQAVALLP 775
Query: 573 FIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKER 632
+ID RLL++ +E+TLT EE RRNSI + ++V +HPL+ LDE + E
Sbjct: 776 WIDSRRLLEQTDMLEYTLTAEEKRRNSINEEEIYVNTAHPLAKQFVKLDE-----REDED 830
Query: 633 VEVKERLNPELSDGMNGYISPCAGDPHPPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHV 692
E ++P+LSDGMN + + P SP++ DI NQV+ A +LP + V
Sbjct: 831 AEKTLPMDPKLSDGMNATLVSVKREAKPSTIPSPISCRPDIQNNQVIVASLRLP-TDRFV 889
Query: 693 TRPPA---GVIFPKKIVQLEDLKPAPV-LWHEDSGRRPHENGR 731
PP G + P V +DL P P+ + E+ RRP G+
Sbjct: 890 --PPVLMPGTVLPTPSVTEQDLPPPPMTILGENFDRRPRGGGQ 930
>gi|407036374|gb|EKE38129.1| 5'-3' exonuclease domain containing protein [Entamoeba nuttalli
P19]
Length = 572
Score = 338 bits (868), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 206/539 (38%), Positives = 294/539 (54%), Gaps = 86/539 (15%)
Query: 1 MNQQRSRRFRASKDAADSA---AEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFM 57
MNQQRSRRF+++KDA ++ AEE R + LP + DSN ITPGTEFM
Sbjct: 105 MNQQRSRRFKSAKDAENAELKHAEENR-----NKVMNGLPEVPYIKPLDSNCITPGTEFM 159
Query: 58 AVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRH 117
+V+S L+ YI R++ W K+ VILSD+ VPGEGEHKIM ++R Q+ P Y+PNT H
Sbjct: 160 SVVSKTLKKYIKERMSQSSYWNKLVVILSDSGVPGEGEHKIMDFIRRQKESPDYNPNTHH 219
Query: 118 CLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGE 177
C+YGLDADLIML+LATHE FSI+RE VF +Q++C++C H C ++ G
Sbjct: 220 CMYGLDADLIMLSLATHERFFSIIREKVFF--EQEQCYICNDI-HSPDKC--PHRKDIGA 274
Query: 178 FDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDF 237
D KP+QFLH LR YL ++ FE C VDDFIF CF VGNDF
Sbjct: 275 MD-------TITKPFQFLHCHILRGYLQITLKVEGFEFE---RC-VDDFIFFCFLVGNDF 323
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
LPH+P+L+IR+GA++LLM VY +EF GGY+T+ ++ ++F+Q VG E I +K
Sbjct: 324 LPHIPSLDIRDGAVDLLMKVY-REFLPHGGYITESGSLNVTNAKNFLQEVGKEEPAILEK 382
Query: 298 RARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECV 357
+ + + +A+R
Sbjct: 383 KCQKEKNYAKR------------------------------------------------- 393
Query: 358 GRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSD 417
RLDN R ++ + + E+ N+ + QE + +A++K+ + D+
Sbjct: 394 -RLDN----QIRDLEIKKANVYENSTLKSTESINTLTPEQQEQLKTQEAEIKK-IEDEER 447
Query: 418 AFNSDNPEE---DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 474
+D ++ D+VKLGEPG+ +RYY KF P++ + +D+V Y EG+ WV+ Y
Sbjct: 448 KLRADFEQKELTDEVKLGEPGYTQRYYSVKFKI-NPKQDTQKIRDIVHSYFEGMNWVLGY 506
Query: 475 YYEGVCSWQWFYPYHYAPFASDLKDLDQFN--ISFELGHPFKPFNQLLGVFPSASSHAL 531
YY+G SW W+YPY YAPFA D+ + +N I ++ PF+PF QL+ V P S +
Sbjct: 507 YYKGCQSWDWYYPYLYAPFAEDMGEYVDYNFEIKYKESTPFRPFEQLMSVLPPRSKSLI 565
>gi|358055903|dbj|GAA98248.1| hypothetical protein E5Q_04931 [Mixia osmundae IAM 14324]
Length = 1271
Score = 338 bits (867), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 160/323 (49%), Positives = 222/323 (68%), Gaps = 4/323 (1%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPK-SDSQVFDSNVITPGTEFMAV 59
MNQQRSRRFRAS++A A E+E +E+E G+++ + D + +D N ITPGT FM +
Sbjct: 137 MNQQRSRRFRASQEAKTKAEEKEAAIREWEAMGKEVSDEYKDKKAWDQNAITPGTPFMDL 196
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
L+ +L+Y++ +LN+DPGW K++V++SDA+VPGEGEHKIM Y+R QR+ GYDPNTRH +
Sbjct: 197 LAASLRYWVASKLNSDPGWSKLQVVISDASVPGEGEHKIMDYIRRQRSHAGYDPNTRHVI 256
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKRKAGEF 178
YGLDADLIML+LATHE +F +LRE VF ++ + C CGQPGH ++NC G K K GEF
Sbjct: 257 YGLDADLIMLSLATHEPYFKVLREDVFAQDRKPRGCHRCGQPGHHSSNCTGAPKEKQGEF 316
Query: 179 DEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFL 238
DEK + +KP+ FL + LREYL+ E +P PF DLE +DD++F+ FFVGNDFL
Sbjct: 317 DEKNK--ITERKPFIFLDVSVLREYLEIELNVPGVPFPFDLERAIDDWVFLIFFVGNDFL 374
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 298
PH+P+LEIREGAI+ L+A+++ +G YLT K +++ + + + ED IFQ+R
Sbjct: 375 PHLPSLEIREGAIDTLLAIWRTSLPQMGDYLTSHGKVNMKSAQFILDGLARREDEIFQRR 434
Query: 299 ARLHQRHAERIKREKAQARRGDD 321
+R KR + DD
Sbjct: 435 RDAEERQDRNEKRRRLGNGASDD 457
Score = 232 bits (592), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 130/319 (40%), Positives = 182/319 (57%), Gaps = 27/319 (8%)
Query: 425 EEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQW 484
++D VKL EPG+KERYY++KF P E + R +V Y EGL WV+ YYY+G SWQW
Sbjct: 717 QDDTVKLWEPGYKERYYQQKFG--VPLEDKAFRDQIVKNYMEGLSWVLAYYYQGCPSWQW 774
Query: 485 FYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNS 544
FYP+H+APFASD DL++ +I FELG PF+PF QL+GVFP+AS +P + LMT +S
Sbjct: 775 FYPWHFAPFASDFTDLEKLDIQFELGAPFRPFEQLMGVFPAASRKHIPAPFHDLMTSEDS 834
Query: 545 PISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADM 604
PI DFYP +F +DMNGK+ WQG+A LPFID +RLL + H L+E+E RRN + +D+
Sbjct: 835 PIIDFYPEEFMIDMNGKKMLWQGVALLPFIDSSRLLAALDLHYHELSEDEERRNGLGSDV 894
Query: 605 LFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFR 664
+FV +H L E L K+ + + + SDG+ G +P F
Sbjct: 895 VFVNDNH-------GLYEALTNLYGKKPSTIPVAFDSKSSDGLAGLAAPDPDCVPGTTFF 947
Query: 665 SPVAS---MEDIMGNQVLCAIYKLP---DAHKHVTRPPAGVIFPKKIVQLEDLKPAPVLW 718
SP + I ++ + A+Y P H+ + P GV K+++ D
Sbjct: 948 SPFDDSFGLPHINNDRSVSAVYHFPPQLKPHRSMLLP--GVQIAKRVLTARD-------- 997
Query: 719 HEDSGRRPHENGRHNPHGT 737
+DS RR NG+ G+
Sbjct: 998 -KDSVRR-GTNGQQQSQGS 1014
>gi|443899706|dbj|GAC77035.1| multidrug resistance-associated protein [Pseudozyma antarctica
T-34]
Length = 1165
Score = 337 bits (865), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 168/328 (51%), Positives = 229/328 (69%), Gaps = 6/328 (1%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKL---PPKSDSQVFDSNVITPGTEFM 57
MNQQRSRRFRA+K+A + E + E+ +G + PK + +DSN ITPGT FM
Sbjct: 116 MNQQRSRRFRAAKEAREKHEETQAALAEWRAKGLAVTEDAPKESKKAWDSNAITPGTPFM 175
Query: 58 AVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRH 117
+L+ +L+Y++ ++N DPGW+ I+VI+SDA+VPGEGEHKIM ++R QR+ P +DPNT+H
Sbjct: 176 DLLAASLRYWVAHKINTDPGWKDIQVIISDASVPGEGEHKIMEHIRRQRSHPEHDPNTKH 235
Query: 118 CLYGLDADLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKRKAG 176
+YGLDADLIML+LATHE +F +LRE VF + K C LCGQPGH AA+C G A++K+G
Sbjct: 236 VIYGLDADLIMLSLATHEPYFKVLREDVFASDNKPKTCNLCGQPGHFAASCTGAARKKSG 295
Query: 177 EFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGND 236
E DEK + KKP+ FL + TLREYL+ E +PN PF DLE +DD++F+ FFVGND
Sbjct: 296 EHDEKA-QTPPEKKPFIFLDVATLREYLEVELNMPNLPFAFDLERAIDDWVFLIFFVGND 354
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLPH+P+LEIR+GAI+ L+ ++KKE A+GGYLT+ K L R + + + S ED IF+
Sbjct: 355 FLPHLPSLEIRDGAIDTLLKIWKKELPAMGGYLTNHGKVELARAQLILNGLASQEDEIFR 414
Query: 297 KRARLHQRHAERIK-REKAQARRGDDVE 323
+R R K RE Q RR +++
Sbjct: 415 RRKEEEDRRENNKKRREDMQKRREKELD 442
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 123/294 (41%), Positives = 176/294 (59%), Gaps = 22/294 (7%)
Query: 426 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 485
ED VK+ EPG++ERYY EKF + + R+ VV Y EGL WV+ YYY+GV SWQW+
Sbjct: 653 EDTVKMWEPGYRERYYREKFGVDLSDT--DFRRQVVKSYIEGLSWVLAYYYQGVPSWQWY 710
Query: 486 YPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 545
YP+H++PFA+D +DL+ +I FELG PFKPF QL+GV P+ S ++P + LMT+ +S
Sbjct: 711 YPFHFSPFAADFEDLESLDIKFELGAPFKPFEQLMGVLPADSRASIPPAFHPLMTESDSD 770
Query: 546 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 605
I DFYP++FE+DMNGK+ +WQG+A LPFIDE RLLD + LT++E RRN + L
Sbjct: 771 IIDFYPSEFEIDMNGKKMAWQGVALLPFIDEKRLLDALSDKYPLLTDDEVRRNGFGNNTL 830
Query: 606 FVLLSHPLSASIYTLDEHCKQLKIKERVEVKE-----RLNPELSDGMNGYISPCAGDPHP 660
FV L + C+Q+ K+R + +NP LS G+ G + P
Sbjct: 831 FVGDESRLYEFL------CEQIYAKKRDGDDKPFEPVPMNPALSGGITGSVKPDPVCVPG 884
Query: 661 PVFRSPVAS--MEDIMGNQVLCAIYKLPDA---HKHV----TRPPAGVIFPKKI 705
F SP+ S ++DI ++ + +Y P+ H+ V +PP V+ +I
Sbjct: 885 STFNSPLTSQDLKDIHNDRSISVLYDFPEQKTPHRSVLLKGLKPPKRVLSAAEI 938
>gi|212645611|ref|NP_496945.3| Protein XRN-1 [Caenorhabditis elegans]
gi|194680614|emb|CAC35856.3| Protein XRN-1 [Caenorhabditis elegans]
Length = 1591
Score = 337 bits (864), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 224/615 (36%), Positives = 314/615 (51%), Gaps = 66/615 (10%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRF +++ A +L + E G +P ++ FDSN ITPGT FM L
Sbjct: 94 MNQQRARRFMSARTA------HTQLAKALEN-GEIMPSEAR---FDSNCITPGTYFMTRL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L +I + D W+ K+ILS NVPGEGEHKIM ++R +R YDPNTRHC+Y
Sbjct: 144 HQKLDDWIKTKSATDSRWQGRKIILSGHNVPGEGEHKIMDFIRTERAGSSYDPNTRHCMY 203
Query: 121 GLDADLIMLALATHEVHFSILR-EVVFT--PGQQDKCFLCGQPGHLAANCEGKAKRKAGE 177
GLDADLIML + +HE HFS+LR EV F P + D KA +K
Sbjct: 204 GLDADLIMLGIVSHEPHFSLLREEVTFNTRPRKND----------------NKATKKPKR 247
Query: 178 FDEKGDEVVVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGN 235
D K + LH+ LREYL +EF + PFE ++E IVDD+I + VGN
Sbjct: 248 TDSD-------VKKFHLLHLSLLREYLAWEFADVKDSLPFEYEMERIVDDWILLGLLVGN 300
Query: 236 DFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 295
DFLPH+P + I + A+ LL + YKK L GY+ + +L R E F+ + + F
Sbjct: 301 DFLPHLPNIHIHDDALPLLYSTYKKVLPTLDGYINEAGYLNLSRFEAFLAELALNDKTSF 360
Query: 296 QKRARLHQRHAERIKREK-AQARRGDDVEP----LAQPDSLVPVSRFHGSRLASGPSPSP 350
ER++ E+ +++R V+P LA+P+ + S + S
Sbjct: 361 M----------ERLEDEQFMESKRIRVVDPEQQELAEPELVAFESSDVEDEAGAEESKDE 410
Query: 351 YQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKE 410
+ D+ S L G+ ++ D Q ++EF +L
Sbjct: 411 AGGAGAEDDEDDAAFVSDHEEDGDDLEPGSGSDELLLS-----NLDAQLLEDEFNDELAT 465
Query: 411 L-LRDKSDAFNSDNPEEDKVKLGEPGW---KERYYEEKFNAKTPEEREETRKDVVLRYTE 466
L L +DA +++ E K + K+ YY +K K +++ ++ Y
Sbjct: 466 LALSGMNDADFANDVEACWTKTINNQFKRHKKTYYSDKLRYKNISKQQ--LREQAEGYVR 523
Query: 467 GLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSA 526
+ W +HYYY G SW WFYP+HYAPF SD++ + FEL PF PF QLL V P A
Sbjct: 524 AIQWNLHYYYHGCVSWSWFYPHHYAPFISDVRGFVGMRMEFELSEPFHPFEQLLAVLPEA 583
Query: 527 SSHALPEHYRKLM-TDP-NSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVK 584
S+ LP R+LM +DP SPI DFYP +FE D+NGKR W+ + +PFI+E RLL+ ++
Sbjct: 584 SADCLPRPLRELMSSDPAKSPICDFYPANFETDLNGKRNEWEAVVLIPFIEEKRLLEAIE 643
Query: 585 KIEHTLTEEEARRNS 599
LT EE RNS
Sbjct: 644 AKRSRLTSEENARNS 658
>gi|147771605|emb|CAN69284.1| hypothetical protein VITISV_028679 [Vitis vinifera]
Length = 321
Score = 336 bits (862), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 175/274 (63%), Positives = 205/274 (74%), Gaps = 30/274 (10%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+KDAA++ AEEERLR+EFE EG+ L PK + DSNVITPGT+FMAVL
Sbjct: 66 MNQQRSRRFRAAKDAAEAEAEEERLRKEFEVEGKMLSPKEKPETSDSNVITPGTKFMAVL 125
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S+ALQYYIH RLN +PGW KVILSD+NVPGEGEHKIMSY+R QRNL G++PNTRHCLY
Sbjct: 126 SVALQYYIHSRLNRNPGWCSTKVILSDSNVPGEGEHKIMSYIRSQRNLLGFNPNTRHCLY 185
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GL ++ PGQQ+KC+LCGQ GHLAA C G E
Sbjct: 186 GL---------------------MITPPGQQEKCYLCGQVGHLAAECRGI---------E 215
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D+ + KK YQFL+IW LREYL Y+ I NPPFEI+ E ++DDF+F+CFFVGNDFLPH
Sbjct: 216 VVDDTPIHKKKYQFLNIWVLREYLQYDLEILNPPFEINFERLLDDFVFLCFFVGNDFLPH 275
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSK 274
MPTLEIREGAINLLM VY++EF A+GGYLTD +
Sbjct: 276 MPTLEIREGAINLLMHVYRREFSAMGGYLTDAGE 309
>gi|413932822|gb|AFW67373.1| hypothetical protein ZEAMMB73_239358 [Zea mays]
Length = 541
Score = 335 bits (858), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 169/323 (52%), Positives = 210/323 (65%), Gaps = 9/323 (2%)
Query: 461 VLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLL 520
V +Y EGLCWVM YYY+GVCSWQWFYPYHYAPFASDLK L + I+F LG PFKPF+QL+
Sbjct: 18 VQKYVEGLCWVMRYYYQGVCSWQWFYPYHYAPFASDLKGLAELEITFFLGQPFKPFDQLM 77
Query: 521 GVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLL 580
G P+ASS+ALP++Y LM+DP+SP+ FYP DFE+DMNGKR++WQG+AKLPFIDE RLL
Sbjct: 78 GTLPAASSNALPKYYGDLMSDPDSPLKSFYPKDFEIDMNGKRFAWQGVAKLPFIDERRLL 137
Query: 581 DEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLN 640
E +K+E TLTEEE RN M D+++V +HPL I L ++ L + + +
Sbjct: 138 AETRKLEDTLTEEEKFRNRTMLDIIYVRDTHPLITQIIFLYQNYYHLSRTDPYVIP--IE 195
Query: 641 PELSDGMNGYISPCAGDPHPPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVI 700
P S GMNG++ + + SPV I N+VL A Y P HKH+ PPAGVI
Sbjct: 196 PAASGGMNGFLCLSERNWYSVTVTSPVKGFNGIAQNRVLNAAYLNPQYHKHIPEPPAGVI 255
Query: 701 FPKKIVQLEDLKPAPVLWHEDSGRRPHENGRHNPHGTISGRQLGEAAHRLVANSLQHMKV 760
P KI++ D KP PVLWH+D+ RR R G +SG LGEAAHRLV NSLQ
Sbjct: 256 IPAKILKPSDFKPFPVLWHQDNSRR-QVRERPQVSGALSGSLLGEAAHRLVKNSLQIRSG 314
Query: 761 DRNGYGDRMHGSPLPYAAAPYVP 783
+ G +PY APY P
Sbjct: 315 NAAGLLY------MPYRGAPYGP 331
>gi|361125661|gb|EHK97694.1| putative 5'-3' exoribonuclease 2 [Glarea lozoyensis 74030]
Length = 1008
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 158/317 (49%), Positives = 215/317 (67%), Gaps = 3/317 (0%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR++++A + A++ L + + +G + + + FDSN ITPGT FM +L
Sbjct: 108 MNQQRSRRFRSAQEAKEKEADKAELAKMLKSQGGRTEDAAVKKAFDSNEITPGTPFMDIL 167
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ +L+Y+I L+LN DP W K+KVI+SD+ VPGEGEHKIM ++R QR+ P +DPNTRH +Y
Sbjct: 168 ASSLRYWIALKLNTDPAWAKMKVIISDSTVPGEGEHKIMEFIRSQRSSPDHDPNTRHVIY 227
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADLIML LATHE HF +LRE VF + + C +CGQ GH A C G+AK K G+FD
Sbjct: 228 GLDADLIMLGLATHEPHFRVLREDVFAQDSKPRTCHMCGQAGHEARECTGQAKVKDGDFD 287
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
EK + KP+ +LH+ LREYL+ E +P+ PF DLE +DD++FMCFFVGNDFLP
Sbjct: 288 EKDSAPAL--KPFIWLHVSILREYLEAELYVPSQPFRFDLERALDDWVFMCFFVGNDFLP 345
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIRE I+ L+A+++ +GGYLT L R + ++ + ED IF++R
Sbjct: 346 HLPSLEIRENGIDTLIAIWRDNIPFMGGYLTKDGHVDLERAQLILEGLAKQEDAIFRRRK 405
Query: 300 RLHQRHAERIKREKAQA 316
R KR K QA
Sbjct: 406 ETEDRREAGAKRRKLQA 422
Score = 207 bits (526), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 110/294 (37%), Positives = 167/294 (56%), Gaps = 9/294 (3%)
Query: 421 SDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVC 480
+D P D V+L + G+ +RYY +KF+ + E R V Y EGL WV+ YY++G
Sbjct: 561 TDEPPVDNVRLWDEGYADRYYSQKFDVHPSDI--EFRHKVARAYVEGLAWVLLYYFQGCP 618
Query: 481 SWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMT 540
SW W+YPYHYAPFA+D DL ISF G F+P+ QL+GV P+AS A+P + +LMT
Sbjct: 619 SWDWYYPYHYAPFAADFVDLKDMTISFNKGRIFRPYEQLMGVLPAASRQAIPPAFHELMT 678
Query: 541 DPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSI 600
+P+S I DFYP DF VD+NGK+++WQG+A LPFID RLL + K+ TL + A RN +
Sbjct: 679 NPDSEIIDFYPEDFVVDLNGKKFAWQGVALLPFIDSERLLQAMAKVYPTLAPDVAARNVV 738
Query: 601 MADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPC-AGDPH 659
D L + +H +Y+ + K++ + +L+P S+G+ G + A PH
Sbjct: 739 GKDALLIAEAH---EELYS--HVAAKFYSKKQGDSVVKLDPRASEGLTGIVEKNEAHIPH 793
Query: 660 PPVFRSPVASMEDIMGNQVLCAIYKLPDA-HKHVTRPPAGVIFPKKIVQLEDLK 712
+ +M + ++ + Y++P + H H + GV F + D++
Sbjct: 794 SSLSFPLSDAMPSLDDDRSISVHYEMPKSKHVHKSMLLRGVQFKPPALNASDIE 847
>gi|367003924|ref|XP_003686695.1| hypothetical protein TPHA_0H00510 [Tetrapisispora phaffii CBS 4417]
gi|357524997|emb|CCE64261.1| hypothetical protein TPHA_0H00510 [Tetrapisispora phaffii CBS 4417]
Length = 1492
Score = 333 bits (854), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 245/724 (33%), Positives = 353/724 (48%), Gaps = 126/724 (17%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR + DA E L++ G +LP + FDSN ITPGTEFMA L
Sbjct: 95 MNQQRSRRFRTAMDA------ETALKKAIAN-GDELPK---GEPFDSNSITPGTEFMAKL 144
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+IH +++ND W+ I+V+ S VPGEGEHKIM ++R R+ Y+ NTRHC+Y
Sbjct: 145 TRNLKYFIHDKISNDLNWQNIEVVFSGHEVPGEGEHKIMDFIRNLRSQKDYEQNTRHCIY 204
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L+TH+ HFS+LRE V G+++ G L
Sbjct: 205 GLDADLIMLGLSTHDPHFSLLREEVKFGGRRNNS------GSLP---------------- 242
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFL 238
+ K+ + LH+ LREY++ EF N F+ + + I+DDFI + F +GNDFL
Sbjct: 243 ------LEKQNFYLLHLSLLREYMNLEFIEISTNLQFKYEFDRILDDFILIMFVIGNDFL 296
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 298
P++P L + +GA +++ +K+ L GY+ + K +L+R+ ++ + +E F+K
Sbjct: 297 PNLPDLHLNKGAFPVILQTFKEALLHLDGYINENGKINLKRLGVWLNYLSQFELMNFEKD 356
Query: 299 ---ARLHQRHAERIKREKAQARRGDD--------------VEP----LAQP--DSLVPVS 335
+ E I E + R ++P LAQ L +S
Sbjct: 357 DIDVDWFNKQLENISLEGEKKRLRQGKKLLLKQQKKIVGAIKPWLLNLAQKPIKELSNLS 416
Query: 336 RFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGR--PHKVPRLSSGATIGAAIVEAENSF 393
+ + S L+ S S E + L N G H + S + +++ N
Sbjct: 417 KDNESALSLELSDS--NIVENLEFLKNFAFDLGLFVSHSKSKDSYSLNLD---IDSINPV 471
Query: 394 ETDP--QENKEEFKAKLKE-----LLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFN 446
ET+ QE + K+ LK+ L+ DK + N E++ WK YY++KFN
Sbjct: 472 ETEEEHQERIKSIKSNLKKYQNAILVEDKEELDN----EQEIYDARFEAWKREYYQDKFN 527
Query: 447 ------AKTPEE-------------------------REETRKDVVLRYTEGLCWVMHYY 475
T EE EE ++ Y EGL WV++YY
Sbjct: 528 LFGSEKVVTEEEIKFDENDDTTNNTEIKRTVEYVNINSEEDVAEIARNYVEGLQWVLYYY 587
Query: 476 YEGVCSWQWFYPYHYAPFASDL-KDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEH 534
Y G SW W+Y HYAP SDL K LDQ FE HPF PF QL+ V P S + +P
Sbjct: 588 YRGCPSWSWYYKGHYAPRISDLAKGLDQ-TFVFEKRHPFTPFQQLMAVLPERSKNLIPAV 646
Query: 535 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 594
R LM D SPI DFYP + ++D NGK W+ + L F+DE RL+ ++ LT EE
Sbjct: 647 LRPLMFDEKSPILDFYPNEVQLDKNGKSADWEAVVLLSFVDEDRLVTAMQPYLEKLTPEE 706
Query: 595 ARRNSIMADMLF-------VLLSHPLSASIYTLD-EHCKQLKIK-ERV---EVKERLNPE 642
RNS D+ F + PL+ + HC ++K + E++ E++ L PE
Sbjct: 707 KERNSFGIDLTFRFNPQVDEVYKSPLNGVFSDIKHNHCMEIKFEMEKLDLHEIRYGLLPE 766
Query: 643 LSDG 646
DG
Sbjct: 767 AKDG 770
>gi|347971872|ref|XP_313715.5| AGAP004430-PA [Anopheles gambiae str. PEST]
gi|333469066|gb|EAA09254.6| AGAP004430-PA [Anopheles gambiae str. PEST]
Length = 1705
Score = 332 bits (852), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 208/600 (34%), Positives = 282/600 (47%), Gaps = 106/600 (17%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR SAAE + L ++ + +G ++ +S FDSN ITPGT FM L
Sbjct: 94 MNQQRGRRFR-------SAAEAQDLLEKAKAKGEEISSESP---FDSNCITPGTSFMVRL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
ALQ++I +++ D W+ VILS PGEGEHKIM Y+R + PG++PNTRHCLY
Sbjct: 144 QNALQHFIQVKIATDRLWKACTVILSGHETPGEGEHKIMEYIRHAKAQPGFNPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L THE +FS+LRE V K G+ D+
Sbjct: 204 GLDADLIMLGLCTHERYFSLLREEV----------------------------KFGKNDK 235
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPP--FEIDLECIVDDFIFMCFFVGNDFL 238
K + + + LH+ L EYL+ EF F D+ ++DD+I + + VGNDF+
Sbjct: 236 KTSNL--KEIRFYLLHLTLLSEYLELEFASVRDRLRFPFDIHKLIDDWILLVYLVGNDFI 293
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 298
PHMP L I E A+ L Y + GY+ + +L R
Sbjct: 294 PHMPHLHINENALPTLYEAYMDVLPNMDGYINEAGILNL-------------------PR 334
Query: 299 ARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVG 358
++ R R+ R D + G + +E +G
Sbjct: 335 LQMLMRRLANFDRDMFLDRYTD-------------LKYLEGKCGKNNLDAFDVDANEIIG 381
Query: 359 RLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDA 418
+ K L S AA V E DP+ ++EFK
Sbjct: 382 ASEMDKDLMALIMSSEMLDSEGEDNAAPVTL-GDIENDPELFEQEFK------------- 427
Query: 419 FNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEG 478
+K YY K + EE R + Y L W +HYYY G
Sbjct: 428 ----------------NYKRNYYMSKMGYA--DFTEEVRAEQAECYIRALQWTLHYYYRG 469
Query: 479 VCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKL 538
V SW W+YP+HYAPF SD+ + + +EL PF PF QLL V P+AS LP Y +L
Sbjct: 470 VVSWSWYYPHHYAPFISDVDNFAHLKLDYELARPFLPFQQLLSVLPAASKQHLPSAYHQL 529
Query: 539 MTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
MTDPNS + DFYP +F D+NGK+ +W+ + +PFIDE RLL + + LT+EE +RN
Sbjct: 530 MTDPNSSVYDFYPVNFATDLNGKQQAWEAVVLIPFIDEKRLLKAMGPCDAFLTDEEKQRN 589
>gi|71024163|ref|XP_762311.1| hypothetical protein UM06164.1 [Ustilago maydis 521]
gi|74698979|sp|Q4P149.3|XRN2_USTMA RecName: Full=5'-3' exoribonuclease 2
gi|46101835|gb|EAK87068.1| hypothetical protein UM06164.1 [Ustilago maydis 521]
Length = 1233
Score = 332 bits (852), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 166/331 (50%), Positives = 232/331 (70%), Gaps = 13/331 (3%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLP--PKSDSQVFDSNVITPGTEFMA 58
MNQQRSRRFRA+K+A + EE+ E++ +G K + +DSN ITPGT FM
Sbjct: 116 MNQQRSRRFRAAKEAREKHEEEQAALAEWKAKGLGATDDEKKSKRAWDSNAITPGTPFMD 175
Query: 59 VLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHC 118
+L+ +L+Y++ ++N+DPGW+ I+VI+SDA+VPGEGEHKIM ++R QR+ P +DPNT+H
Sbjct: 176 LLAASLRYWVAQKINSDPGWKDIQVIISDASVPGEGEHKIMEHIRRQRSHPEHDPNTKHV 235
Query: 119 LYGLDADLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKRKAGE 177
+YGLDADLIML+LATHE +F +LRE VF + K C LCGQPGH AA+C G AK+K+G+
Sbjct: 236 IYGLDADLIMLSLATHEPYFKVLREDVFAADNKPKTCNLCGQPGHFAASCTGAAKKKSGQ 295
Query: 178 FDEKGDEVVVP----KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFV 233
DE + P KKP+ FL + TLREYL+ E IP PF DLE +DD++F+ FFV
Sbjct: 296 HDE-----IAPTPPEKKPFIFLDVATLREYLEVELNIPQLPFAFDLERAIDDWVFLIFFV 350
Query: 234 GNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDR 293
GNDFLPH+P+LEIR+GAI+ L+ ++KKE A+GGYLT+ + L R + + + S ED
Sbjct: 351 GNDFLPHLPSLEIRDGAIDTLLRIWKKELPAMGGYLTNHGRVELGRAQLILSGLASEEDE 410
Query: 294 IF-QKRARLHQRHAERIKREKAQARRGDDVE 323
IF +++ +R R +RE+ Q RR +++
Sbjct: 411 IFRRRKEDEDRRETNRKRREEMQQRRDKELD 441
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 125/293 (42%), Positives = 179/293 (61%), Gaps = 13/293 (4%)
Query: 426 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 485
ED VK+ EPG++ERYY+EKF + + R+ VV Y EGLCWV+ YYY+GV SWQW+
Sbjct: 660 EDTVKMWEPGYRERYYKEKFGVDLSDT--DFRRSVVKSYIEGLCWVLAYYYQGVPSWQWY 717
Query: 486 YPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 545
YP+H++PFA+D +DL+ +I F+LG PFKPF QL+GV P+ S ++P + LMT+ +S
Sbjct: 718 YPFHFSPFAADFEDLESLDIQFQLGSPFKPFEQLMGVLPADSRASIPPAFHPLMTESDSD 777
Query: 546 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 605
I DFYP++FE+DMNGK+ +WQG+A LPFIDE RLLD +K+ L+E+E RRN + L
Sbjct: 778 IIDFYPSEFEIDMNGKKMAWQGVALLPFIDEKRLLDALKERYPLLSEDEVRRNGFGNNTL 837
Query: 606 FV----LLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPP 661
FV L L IY + +RV V NP LS G+ G++ P
Sbjct: 838 FVGNESRLYDFLCEEIYAKKRTTDDGETPKRVAV----NPALSGGITGFVKPDPVCVPGS 893
Query: 662 VFRSPVAS--MEDIMGNQVLCAIYKLPDAHK-HVTRPPAGVIFPKKIVQLEDL 711
F SP+ S + DI ++ + +Y P+ H + G+ PK+I+ ++
Sbjct: 894 TFNSPLTSQALHDIHNDRSISVLYDFPEQKTPHRSVLLKGLKPPKRILSAAEI 946
>gi|343427909|emb|CBQ71434.1| related to dna exoribonuclease Dhp1p [Sporisorium reilianum SRZ2]
Length = 1251
Score = 331 bits (849), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 169/328 (51%), Positives = 230/328 (70%), Gaps = 17/328 (5%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDS----QVFDSNVITPGTEF 56
MNQQRSRRFRA+K+A + E+E E++ +G LP D+ + +DSN ITPGT F
Sbjct: 116 MNQQRSRRFRAAKEAREKHEEKEAALAEWKAKG--LPVTDDALQSKKAWDSNAITPGTPF 173
Query: 57 MAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTR 116
M +L+ +L+Y++ ++N+DPGW+ ++VI+SDA+VPGEGEHKIM ++R QR+ P +DPNT+
Sbjct: 174 MDLLAASLRYWVAQKINSDPGWKDVQVIISDASVPGEGEHKIMEHIRRQRSHPEHDPNTK 233
Query: 117 HCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKRKA 175
H +YGLDADLIML+LATHE +F +LRE VF + K C LCGQPGH AA+C G AK+K+
Sbjct: 234 HVIYGLDADLIMLSLATHEPYFKVLREDVFAADNKPKTCNLCGQPGHFAASCTGAAKKKS 293
Query: 176 GEFDEKGDEVVVP----KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCF 231
GE DE + P KKP+ FL + TLREYL+ E IP PF DLE +DD++F+ F
Sbjct: 294 GEHDE-----IAPTPPEKKPFIFLDVATLREYLEVELNIPQLPFAFDLERAIDDWVFLIF 348
Query: 232 FVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYE 291
FVGNDFLPH+P+LEIR+GAI+ L+ ++KKE A+GGYLT+ + L R + + + S E
Sbjct: 349 FVGNDFLPHLPSLEIRDGAIDTLLRIWKKELPAMGGYLTNHGRVELGRAQIILSGLASEE 408
Query: 292 DRIFQKRARLHQRHAERIK-REKAQARR 318
D IF++R R K RE+ Q RR
Sbjct: 409 DDIFRRRKEDEDRRENNKKRREEMQKRR 436
Score = 235 bits (600), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 120/293 (40%), Positives = 177/293 (60%), Gaps = 14/293 (4%)
Query: 426 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 485
ED VK+ EPG++ERYY+EKF + + R+ VV Y EGLCWV+ YYY+GV SWQW+
Sbjct: 648 EDTVKMWEPGYRERYYKEKFGVDLSDT--DFRRQVVKSYIEGLCWVLAYYYQGVPSWQWY 705
Query: 486 YPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 545
YP+H++PFA+D +DL+ +I FELG PFKPF QL+GV P+ S ++P + LMT+ +S
Sbjct: 706 YPFHFSPFAADFEDLESLDIKFELGAPFKPFEQLMGVLPADSRASIPPAFHPLMTESDSE 765
Query: 546 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 605
I DFYP++FE+DMNGK+ +WQG+A LPFIDE RLLD + + L+++E RRN + L
Sbjct: 766 IIDFYPSEFEIDMNGKKMAWQGVALLPFIDEKRLLDALNEKYPLLSDDEVRRNGFGNNTL 825
Query: 606 FV----LLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPP 661
FV L L IY K+ + + +N L+ G+ GY+ P
Sbjct: 826 FVGSESRLYDFLCEEIY-----AKKPSTDDGTPKRIAVNSALTGGVTGYVKPDPVCVPGS 880
Query: 662 VFRSPVAS--MEDIMGNQVLCAIYKLPDAHK-HVTRPPAGVIFPKKIVQLEDL 711
F SP+ S + DI ++ + +Y P+ H + G+ PK+++ ++
Sbjct: 881 TFNSPLTSQDLHDIHNDRSISVLYDFPEQKTPHRSVLLKGLKLPKRVLSAAEI 933
>gi|28503006|gb|AAH47182.1| 5'-3' exoribonuclease 2 [Danio rerio]
gi|182889854|gb|AAI65726.1| Xrn2 protein [Danio rerio]
Length = 540
Score = 331 bits (848), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 163/298 (54%), Positives = 205/298 (68%), Gaps = 1/298 (0%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ + A E++++R+E G LPP+ + FDSN ITPGTEFM L
Sbjct: 111 MNQQRSRRFRASKEGVELAEEKQKMREEVIERGGYLPPEEIKERFDSNCITPGTEFMDNL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YY+ RL NDPGW I V LSDA+VPGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 171 AKCLRYYVADRLTNDPGWRNITVFLSDASVPGEGEHKIMDYIRRQRGQPNHDPNTHHCLC 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +C+G + K GE DE
Sbjct: 231 GADADLIMLGLATHEPNFTIIRE-EFKPNKPRPCALCSQMGHEIKDCQGLPREKQGEHDE 289
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + V ++ + F+ + LREYL+ E + + PF E VDD++FMCFFVGNDFLPH
Sbjct: 290 FADTIPVSEQEFIFIRLAVLREYLERELTMASLPFPFSFERSVDDWVFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 298
+P+LEIREGAI+ L+ +YK GGYLT+ +L RVE +QAVG ED IF+KR
Sbjct: 350 LPSLEIREGAIDRLVGIYKDVVHKTGGYLTENGFVNLERVELIMQAVGVAEDNIFKKR 407
>gi|224123990|ref|XP_002319214.1| predicted protein [Populus trichocarpa]
gi|222857590|gb|EEE95137.1| predicted protein [Populus trichocarpa]
Length = 692
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 157/308 (50%), Positives = 205/308 (66%), Gaps = 1/308 (0%)
Query: 398 QENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETR 457
Q + + + + + + + + +S + +D +KLG+ GWKERYY EKF AK+ +ER+ R
Sbjct: 386 QVSLNDLEIRFQRISKRQQAFHSSKSLFDDGIKLGDEGWKERYYAEKFEAKSEDERDTIR 445
Query: 458 KDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFN 517
+ V +Y EG+CWVM YYYEGVCSWQWFYPYHYAPFASD DQ I F LG PFKPF+
Sbjct: 446 RHAVFKYVEGICWVMRYYYEGVCSWQWFYPYHYAPFASDFYGCDQLEIHFTLGEPFKPFD 505
Query: 518 QLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEA 577
QL+ V P+AS+HALP YRKLM D +SPI DFYPTDFE+D NGKR+SWQ I KLPFI+E+
Sbjct: 506 QLMAVLPAASAHALPLFYRKLMIDASSPILDFYPTDFELDNNGKRFSWQAICKLPFIEES 565
Query: 578 RLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKE 637
RL+ E+ K+EHTLT+EE RRN + D+L V +SHPL+ + +L E CK K
Sbjct: 566 RLVSEITKVEHTLTDEERRRNRLGYDVLCVHVSHPLAVKVISLFE-CKDQSALPTANGKL 624
Query: 638 RLNPELSDGMNGYISPCAGDPHPPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPA 697
+++P++S GMNGYI P SP+ M I QV+ Y+ P H H+ R P
Sbjct: 625 KIDPKISGGMNGYIYISEKPEWPLGIFSPIDGMLMIASEQVISVFYEYPPFHSHIPRLPE 684
Query: 698 GVIFPKKI 705
GVI P K+
Sbjct: 685 GVILPNKV 692
Score = 318 bits (815), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 178/323 (55%), Positives = 219/323 (67%), Gaps = 35/323 (10%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQV-----FDSNVITPGTE 55
MNQQRSRRFRA++DAAD A E +G +P + + DSNVITPGTE
Sbjct: 111 MNQQRSRRFRAARDAADQALS-------IETDGGIVPESEEGNLEQVKKLDSNVITPGTE 163
Query: 56 FMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNT 115
FM +LS AL YYI LR+ D GW IKVILSDANV GEGEHKIMSY+RLQRNLPG+DPNT
Sbjct: 164 FMDLLSSALHYYIRLRMKEDLGWRGIKVILSDANVAGEGEHKIMSYIRLQRNLPGFDPNT 223
Query: 116 RHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKA 175
RHCLYGLDADLIMLALA+HE+HFSILRE G D Q G A N E
Sbjct: 224 RHCLYGLDADLIMLALASHEIHFSILRERRKLNGDSD------QVGKFAENIENH----- 272
Query: 176 GEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGN 235
+ +QFL++W LREYL Y+ RIP+ ++DLE ++DDF+FMC FVGN
Sbjct: 273 -----------ISGMKFQFLNVWILREYLAYDLRIPDTTLKVDLERVIDDFVFMCLFVGN 321
Query: 236 DFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 295
DFLPH+P+LEI EGAI+LLM VYKKEF +GGYLT+ + +L RVEHF+QA+GS+E IF
Sbjct: 322 DFLPHIPSLEISEGAIDLLMTVYKKEFAQMGGYLTNSFEINLIRVEHFVQALGSHESAIF 381
Query: 296 QKRARLHQRHAERIKREKAQARR 318
++R ++ E I+ ++ R+
Sbjct: 382 RRRNQVSLNDLE-IRFQRISKRQ 403
>gi|349604825|gb|AEQ00267.1| 5'-3' exoribonuclease 2-like protein, partial [Equus caballus]
Length = 417
Score = 330 bits (845), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 163/298 (54%), Positives = 209/298 (70%), Gaps = 1/298 (0%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 111 MNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 171 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 231 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDE 289
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 290 LADSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 298
+P+LEIREGAI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 350 LPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKR 407
>gi|355729473|gb|AES09879.1| 5'-3' exoribonuclease 2 [Mustela putorius furo]
Length = 412
Score = 330 bits (845), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 163/298 (54%), Positives = 209/298 (70%), Gaps = 1/298 (0%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 111 MNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 171 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 231 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDE 289
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 290 LADSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 298
+P+LEIREGAI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 350 LPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKR 407
>gi|74227371|dbj|BAE21766.1| unnamed protein product [Mus musculus]
Length = 417
Score = 330 bits (845), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 163/298 (54%), Positives = 209/298 (70%), Gaps = 1/298 (0%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 111 MNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 171 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 231 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCALCNQFGHEVKDCEGLPREKKGKHDE 289
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 290 LADSLPCAEGEFIFLRLNVLREYLERELTMASLPFPFDVERSIDDWVFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 298
+P+LEIREGAI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 350 LPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKR 407
>gi|169763218|ref|XP_001727509.1| 5'-3' exoribonuclease 2 [Aspergillus oryzae RIB40]
gi|238489103|ref|XP_002375789.1| 5'->3' exoribonculease Dhp1 [Aspergillus flavus NRRL3357]
gi|115311954|sp|Q2UCP5.3|XRN2_ASPOR RecName: Full=5'-3' exoribonuclease 2
gi|83770537|dbj|BAE60670.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220698177|gb|EED54517.1| 5'->3' exoribonculease Dhp1 [Aspergillus flavus NRRL3357]
Length = 1035
Score = 329 bits (844), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 154/319 (48%), Positives = 220/319 (68%), Gaps = 6/319 (1%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGR---KLPPKSDSQVFDSNVITPGTEFM 57
MNQQR+RRFR++++A ++ ++E R++F ++ + ++ + + +DSNVITPGT FM
Sbjct: 111 MNQQRARRFRSAQEAKEADEKKEEFRKQFLKKSKGDQEIHEEVIQKTWDSNVITPGTPFM 170
Query: 58 AVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRH 117
+L+ +L+Y+I +LN DP WEK+K+I+SDA VPGEGEHKIM +VR QR P +DPNTRH
Sbjct: 171 DILAASLRYWIAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFVRSQRAAPEHDPNTRH 230
Query: 118 CLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAG 176
+YGLDADLIML LATHE HF +LRE V F + C LCGQ GH A C G+AK K G
Sbjct: 231 VIYGLDADLIMLGLATHEPHFRVLREDVFFQESKARTCHLCGQAGHKAEECRGQAKEKNG 290
Query: 177 EFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGND 236
+FDEKG + KP+ +L++ LREYL E +P+ PF DLE +DD++FMCFFVGND
Sbjct: 291 QFDEKGKGTSL--KPFIWLNVSILREYLAVELYVPHQPFPFDLERALDDWVFMCFFVGND 348
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLPH+P+L+IRE I+ L+A+++ +GGYLT ++ + +Q + ED IF+
Sbjct: 349 FLPHLPSLDIRENGIDTLIAIWRDNIPVMGGYLTKDGHVEFKKAQLILQGLAKQEDAIFR 408
Query: 297 KRARLHQRHAERIKREKAQ 315
+R ++ ++ KR K +
Sbjct: 409 RRRQVEEKKLANEKRRKEE 427
Score = 214 bits (546), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 118/293 (40%), Positives = 173/293 (59%), Gaps = 19/293 (6%)
Query: 427 DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFY 486
D V+L E G+ +RYYE+KF P+++E R V Y EGL WV+ YY++G SW W+Y
Sbjct: 583 DTVRLWEEGYADRYYEQKFGVD-PQDKE-FRHKVARAYAEGLAWVLLYYFQGCPSWNWYY 640
Query: 487 PYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPI 546
PYHYAPFA+D D+ +SFE G PFKPF QL+GV P++S+HA+PE + LM DP S I
Sbjct: 641 PYHYAPFAADFVDIGDMELSFEKGTPFKPFEQLMGVLPASSNHAIPEVFHDLMQDPESEI 700
Query: 547 SDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 606
DFYP DF VD+NGK+++WQG+ LPFIDE RLL ++K L+++E RN++ ++L
Sbjct: 701 IDFYPEDFAVDLNGKKFAWQGVILLPFIDEKRLLAAMEKKYPLLSDDERHRNTVGREVLL 760
Query: 607 VLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAG-DPHPPVFRS 665
+ HPL + K++ K LN +S+G+ G + PH S
Sbjct: 761 LSDGHPLYQDL------VANFYSKKQGAPKYTLNMRVSEGLAGRVERNETYIPH----SS 810
Query: 666 PVASMED-----IMGNQVLCAIYKLPDA-HKHVTRPPAGVIFPKKIVQLEDLK 712
V+S+E+ + ++ L Y++P + H H + GV FP + D++
Sbjct: 811 LVSSLEEYGMPTLEDDRSLTVNYEIPKSNHIHKSMLLRGVKFPPPALDNADIQ 863
>gi|171690192|ref|XP_001910021.1| hypothetical protein [Podospora anserina S mat+]
gi|170945044|emb|CAP71155.1| unnamed protein product [Podospora anserina S mat+]
Length = 1078
Score = 329 bits (844), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 165/324 (50%), Positives = 212/324 (65%), Gaps = 8/324 (2%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDS-----QVFDSNVITPGTE 55
MNQQRSRRFRA++DA + ++E+L + +++ + + FDSN ITPGT
Sbjct: 129 MNQQRSRRFRAARDAKEKEEDKEKLLKMLQKDKKSTVQVQPVEEVVQKAFDSNSITPGTP 188
Query: 56 FMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNT 115
FM +L+ +L+Y+ +LN DP W KIKVI+SDA +PGEGEHKIM YVR QRN PG+DPNT
Sbjct: 189 FMDILAASLRYWCSYKLNTDPAWAKIKVIISDATIPGEGEHKIMEYVRSQRNSPGHDPNT 248
Query: 116 RHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKRK 174
RH +YGLDADLIML LATHE HF +LRE VF + + C LCGQ GH AANC G+AK K
Sbjct: 249 RHVIYGLDADLIMLGLATHEPHFRVLREDVFAQDARPRLCKLCGQKGHDAANCRGEAKEK 308
Query: 175 AGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVG 234
GEF EK + P KP+ +LH+ REYL E +P PF DLE +DD++FMCFFVG
Sbjct: 309 EGEFGEK--DRAAPLKPFIWLHVNIFREYLAVELNVPGLPFAFDLERAIDDWVFMCFFVG 366
Query: 235 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI 294
NDFLPH+P LEIRE I+ L+A++K ++GGYLT L R + + + ED I
Sbjct: 367 NDFLPHLPALEIRENGIDTLVAIWKDNLPSMGGYLTKDGHVDLERAQLIMAGLAKQEDAI 426
Query: 295 FQKRARLHQRHAERIKREKAQARR 318
F++R R KR K Q +
Sbjct: 427 FRRRKETEDRREAGFKRRKLQQEK 450
Score = 206 bits (524), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 115/290 (39%), Positives = 173/290 (59%), Gaps = 13/290 (4%)
Query: 427 DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFY 486
D V+L E G+ +RYYE+KF K + E R V Y EGL WV+ YY++G SW+WFY
Sbjct: 596 DTVRLWEEGYADRYYEQKF--KVDPKDIEFRHKVARAYVEGLAWVLMYYFQGCPSWEWFY 653
Query: 487 PYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPI 546
PYHYAPFA+D DL + I+F+ G +PF QL+ V P+AS HA+PE + LMT+ +S I
Sbjct: 654 PYHYAPFAADFVDLGKMTINFDKGRISRPFEQLMSVLPAASRHAIPEVFHDLMTNEDSEI 713
Query: 547 SDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 606
DFYP +F++D+NGK+ SWQGIA LPFI+ RLL ++ + L+EE+ RN ++L
Sbjct: 714 IDFYPEEFDIDLNGKKMSWQGIALLPFIEMPRLLKAMEPKQKLLSEEDRARNEPGKEVLI 773
Query: 607 VLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAG-DPHPPVFRS 665
+ +HP+ D+ ++ K+ V K ++ LS+G++G I G PH + R
Sbjct: 774 ISDAHPV------YDDITQKFYSKKPVGDKVEIDSALSEGLSGKIEKIEGYVPHGEL-RY 826
Query: 666 PVA--SMEDIMGNQVLCAIYKLP-DAHKHVTRPPAGVIFPKKIVQLEDLK 712
P+ + D+ ++ L Y+LP +H H + GV P ++ D++
Sbjct: 827 PLERHTFPDVDFDRTLSVHYELPSSSHIHKSILLRGVKLPPPVLDRSDIE 876
>gi|391869656|gb|EIT78851.1| 5'-3' exonuclease [Aspergillus oryzae 3.042]
Length = 1035
Score = 329 bits (843), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 154/319 (48%), Positives = 220/319 (68%), Gaps = 6/319 (1%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGR---KLPPKSDSQVFDSNVITPGTEFM 57
MNQQR+RRFR++++A ++ ++E R++F ++ + ++ + + +DSNVITPGT FM
Sbjct: 111 MNQQRARRFRSAQEAKEADEKKEEFRKQFLKKSKGDQEIHEEVIQKTWDSNVITPGTPFM 170
Query: 58 AVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRH 117
+L+ +L+Y+I +LN DP WEK+K+I+SDA VPGEGEHKIM +VR QR P +DPNTRH
Sbjct: 171 DILAASLRYWIAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFVRSQRAAPEHDPNTRH 230
Query: 118 CLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAG 176
+YGLDADLIML LATHE HF +LRE V F + C LCGQ GH A C G+AK K G
Sbjct: 231 VIYGLDADLIMLGLATHEPHFRVLREDVFFQESKARTCHLCGQAGHKAEECRGQAKEKNG 290
Query: 177 EFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGND 236
+FDEKG + KP+ +L++ LREYL E +P+ PF DLE +DD++FMCFFVGND
Sbjct: 291 QFDEKGKGTSL--KPFIWLNVSILREYLAVELYVPHQPFPFDLERALDDWVFMCFFVGND 348
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLPH+P+L+IRE I+ L+A+++ +GGYLT ++ + +Q + ED IF+
Sbjct: 349 FLPHLPSLDIRENGIDTLIAIWRDNIPVMGGYLTKDGHVEFKKAQLILQGLAKQEDAIFR 408
Query: 297 KRARLHQRHAERIKREKAQ 315
+R ++ ++ KR K +
Sbjct: 409 RRRQVEEKKLANEKRRKEE 427
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 118/293 (40%), Positives = 173/293 (59%), Gaps = 19/293 (6%)
Query: 427 DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFY 486
D V+L E G+ +RYYE+KF P+++E R V Y EGL WV+ YY++G SW W+Y
Sbjct: 583 DTVRLWEEGYADRYYEQKFGVD-PQDKE-FRHKVARAYAEGLAWVLLYYFQGCPSWNWYY 640
Query: 487 PYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPI 546
PYHYAPFA+D D+ +SFE G PFKPF QL+GV P++S+HA+PE + LM DP S I
Sbjct: 641 PYHYAPFAADFVDIGDMELSFEKGTPFKPFEQLMGVLPASSNHAIPEVFHDLMQDPESEI 700
Query: 547 SDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 606
DFYP DF VD+NGK+++WQG+ LPFIDE RLL ++K L+++E RN++ ++L
Sbjct: 701 IDFYPEDFAVDLNGKKFAWQGVILLPFIDEKRLLAAMEKKYPLLSDDERHRNTVGREVLL 760
Query: 607 VLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAG-DPHPPVFRS 665
+ HPL + K++ K LN +S+G+ G + PH S
Sbjct: 761 LSDGHPLYQDL------VANFYSKKQGAPKYTLNMRVSEGLAGRVERNETYIPH----SS 810
Query: 666 PVASMED-----IMGNQVLCAIYKLPDA-HKHVTRPPAGVIFPKKIVQLEDLK 712
V+S+E+ + ++ L Y++P + H H + GV FP + D++
Sbjct: 811 LVSSLEEYGMPTLEDDRSLTVNYEIPKSNHIHKSMLLRGVKFPPPALDNADIQ 863
>gi|268533038|ref|XP_002631647.1| C. briggsae CBR-XRN-1 protein [Caenorhabditis briggsae]
Length = 1183
Score = 329 bits (843), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 226/618 (36%), Positives = 315/618 (50%), Gaps = 84/618 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRF +++ A + ++ Q + G LP + + FDSN ITPGT FM L
Sbjct: 94 MNQQRARRFMSARTA------QTQMDQAIAK-GEVLPSE---KRFDSNCITPGTYFMTRL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L ++ + +D W+ K+ILS NVPGEGEHKIM ++R +R GYDPNTRHC+Y
Sbjct: 144 HEKLDAWVREKSVSDTRWQGRKIILSGHNVPGEGEHKIMDFIRSERAGTGYDPNTRHCMY 203
Query: 121 GLDADLIMLALATHEVHFSILR-EVVFT--PGQQDKCFLCGQPGHLAANCEGKAKRKAGE 177
GLDADLIML + +HE HFS+LR EV F P + D+ + K KR E
Sbjct: 204 GLDADLIMLGIVSHEPHFSLLREEVTFNTRPRKNDQ--------------KKKPKRTDSE 249
Query: 178 FDEKGDEVVVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGN 235
K + LH+ LREYL +EF + PFE D+E IVDD+I M VGN
Sbjct: 250 V-----------KTFHLLHLSLLREYLAWEFADVKESLPFEYDMERIVDDWIMMGLLVGN 298
Query: 236 DFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 295
DFLPH+P++ I + A+ LL + YKK +L Y+ + +L R E F+ + + F
Sbjct: 299 DFLPHLPSIHIHDDALPLLYSTYKKVLPSL-DYINESGYLNLARFEKFLAQLSLNDKNCF 357
Query: 296 QKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSE 355
+ + ++ K R G S L + S S + E
Sbjct: 358 -----MDKLEDDQFMESKKLPRNG---------------SGEEEEELVAFES-SDIEDEE 396
Query: 356 CVGRLDNGKGTSGRPHKVPRLSS---GATIGAAIVEAENSFETDPQENKEEFKAKLKEL- 411
G ++ + H +S G AE S + D Q +EEF +L L
Sbjct: 397 ADGEKEDS-SRNNDDHDAAFVSDHEEDKNNGTGKTSAEESPDYDAQFLEEEFNDELATLA 455
Query: 412 LRDKSDAFNSDNPEEDKVKLGEPGW---KERYYEEKFNAKTPEEREETRKDVVLR----- 463
L DA ++N E K + + K+ YY +K K + E LR
Sbjct: 456 LSGMDDADFANNVEACWTKAIDNQFKRHKKYYYSDKLRYKNISKAE-------LRAQAEG 508
Query: 464 YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVF 523
Y + W +HYYY G SW WFYP+HYAPF SD++ I FEL PF+PF QLL V
Sbjct: 509 YVRAIQWNLHYYYHGCVSWSWFYPHHYAPFISDVQGFADMKIEFELSKPFQPFEQLLAVL 568
Query: 524 PSASSHALPEHYRKLM-TDP-NSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLD 581
P AS LP ++LM +DP S I DFYP+ FE D+NGK+ W+ + +PFI+E RLL+
Sbjct: 569 PEASRDCLPRPLQELMSSDPAQSAIHDFYPSKFETDLNGKKNDWEAVVLIPFIEEKRLLE 628
Query: 582 EVKKIEHTLTEEEARRNS 599
++ ++ L++EE RN+
Sbjct: 629 AIESKQNRLSQEEKMRNT 646
>gi|83759101|gb|AAI10279.1| XRN2 protein [Bos taurus]
Length = 422
Score = 328 bits (841), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 164/313 (52%), Positives = 213/313 (68%), Gaps = 1/313 (0%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++ E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 111 MNQQRSRRFRASKEGMEAEIEKQRVREEILAKGGYLPPEEIKERFDSNCITPGTEFMDNL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 171 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 231 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHDVKDCEGLPREKKGKHDE 289
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + F+ + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 290 LADSLPCAEGEFIFIRLSVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+LEIREGAI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 350 LPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKD 409
Query: 301 LHQRHAERIKREK 313
R K++K
Sbjct: 410 DEDSFRRRQKKKK 422
>gi|403163709|ref|XP_003323763.2| hypothetical protein PGTG_05665 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375164418|gb|EFP79344.2| hypothetical protein PGTG_05665 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1203
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 160/316 (50%), Positives = 222/316 (70%), Gaps = 5/316 (1%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPP--KSDSQVFDSNVITPGTEFMA 58
MNQQRSRRFRA+++A E++ L +E++++G++LP K+D + +DSN ITPGT FM
Sbjct: 115 MNQQRSRRFRAAQEAKVKEEEKQALIEEYKQQGKELPEDYKTDKKAWDSNAITPGTPFMT 174
Query: 59 VLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHC 118
+L+ +L+Y+I ++N D GW +I+VILSDA+VPGEGEHKIM +VR QR P YDPNT+H
Sbjct: 175 LLTESLRYWIVYKMNTDKGWSQIQVILSDASVPGEGEHKIMDFVRRQRTQPSYDPNTKHV 234
Query: 119 LYGLDADLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKRKAGE 177
+YGLDADLIML+LATHE HF +LRE VF ++ K C+ CGQ GH ++ C+GK K K E
Sbjct: 235 IYGLDADLIMLSLATHEPHFKVLREDVFADQKKGKGCYTCGQLGHHSSQCQGKPKEKVDE 294
Query: 178 FDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDF 237
D K + V +KP+ FL + LREYL E I PF D+E +DD++ + FFVGNDF
Sbjct: 295 HDTK--QKPVERKPFIFLDVGILREYLAIELNIGGLPFPFDIERAIDDWVLLIFFVGNDF 352
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
LPH+P+LEIREGAI+ L+ ++K +GG+LTD +L+R E ++ + S ED IF++
Sbjct: 353 LPHLPSLEIREGAIDTLLKIWKTNLGRMGGFLTDCGALNLKRTEIILEGLASREDEIFRR 412
Query: 298 RARLHQRHAERIKREK 313
R +R + KR K
Sbjct: 413 RREAEERQDQSAKRRK 428
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 111/264 (42%), Positives = 163/264 (61%), Gaps = 11/264 (4%)
Query: 425 EEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQW 484
++D VKL EPG++ERY+ +KF + +E E ++ +V Y EGL WV+ YYY+G SWQW
Sbjct: 692 QDDTVKLWEPGYRERYFRQKFGIELNDEVE--KRKIVKHYVEGLAWVLAYYYQGCQSWQW 749
Query: 485 FYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNS 544
FYPYHY+PFASD +L++F I F LG PFKP+ QL+GVFP+AS +P+ Y LM + +S
Sbjct: 750 FYPYHYSPFASDFTNLEEFEIKFNLGQPFKPYEQLMGVFPAASRCHIPDVYHDLMMNDDS 809
Query: 545 PISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADM 604
PI DFYP +FE+DMNGK+ WQG+A LPFI++ RLL+ +K E L E+ RN +
Sbjct: 810 PIKDFYPEEFEIDMNGKKMLWQGVALLPFIEQDRLLNSMKDCEDRLAPEDKIRNEPGHVV 869
Query: 605 LFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFR 664
+F +HP + CK + ++ E L+P ++G+ G P F
Sbjct: 870 MFCGEAHP------QYENFCKIYQKRDNKEAV-TLDPAHANGVFGSALPDPDCIPGSTFY 922
Query: 665 SPVAS--MEDIMGNQVLCAIYKLP 686
SP+ + + DI ++ + A + +P
Sbjct: 923 SPLPTVGLPDISNDKSIFARFFVP 946
>gi|156839563|ref|XP_001643471.1| hypothetical protein Kpol_1006p9 [Vanderwaltozyma polyspora DSM
70294]
gi|156114083|gb|EDO15613.1| hypothetical protein Kpol_1006p9 [Vanderwaltozyma polyspora DSM
70294]
Length = 1292
Score = 327 bits (839), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 212/640 (33%), Positives = 330/640 (51%), Gaps = 86/640 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR +A E E+ + G + + + FD N ITPGT FM L
Sbjct: 97 MNQQRSRRFR-------TAMENEKAMNKIIENGGVIS--EEIKPFDPNAITPGTTFMEKL 147
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+IH +++ND W I++ILS VPGEGEHKIM Y+R +R+ GY+PN RHC+Y
Sbjct: 148 TKYLKYFIHDKISNDINWANIEIILSGHEVPGEGEHKIMDYIRKKRSQKGYNPNLRHCIY 207
Query: 121 GLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADLI+L L+TH HF+ILRE V FT ++K K G
Sbjct: 208 GLDADLIILGLSTHAPHFAILREEVTFTKTLKNK--------------------KTG--- 244
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFR-IPNP-PFEIDLECIVDDFIFMCFFVGNDF 237
+ + + FL + LREYL+ EF+ I N ++ D E I+DDFI + F +GNDF
Sbjct: 245 -------LELQRFYFLQLSLLREYLELEFKDIANKLKYKYDFERILDDFILILFVIGNDF 297
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
LP++P L + +GA +++ +K + GY+ + L+R+ +I + +E F++
Sbjct: 298 LPNLPDLHLNKGAFPVILETFKLSLLSSEGYINENGTIDLKRLSTWIDYLSKFELMNFKQ 357
Query: 298 RA---RLHQRHAERIKREKAQARRGDDV------EPLAQPDSLVPVSRFHGSRLASGPSP 348
+ + + +EK +G+ + + L++ ++ + F ++L +
Sbjct: 358 KEFNEEWFNKQLIALAKEKQADSKGNKLLINNRRKILSKIENWINEEVF-ANQLINENVE 416
Query: 349 SPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDP--QENKEEFKA 406
+++ +G D K L ++ + +N + P +EN+ E +
Sbjct: 417 LRLKRNVIIGNSDFFKA----------LCKDLSLEIVKDKKKNEYLIHPIFKENQGEVET 466
Query: 407 --------KLKELLRDKSDAFNSDNPEEDKV----KLGE------PGWKERYYEEKFNAK 448
++K +L+ D++ + DK+ KL E K YY K +
Sbjct: 467 TELGLQYEEMKNVLKKHKDSYKEFHSTPDKLPKLDKLDEFNNESFTKMKSSYYLRKLSID 526
Query: 449 TPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDL-KDLDQFNISF 507
+E + T D+ Y EGL WVM+YYY G SW WFY YHYAP SD+ L+Q I F
Sbjct: 527 ITDEEKVT--DLAKNYVEGLQWVMYYYYRGCASWGWFYRYHYAPRISDIYLGLNQ-KIQF 583
Query: 508 ELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQG 567
E PF PF QL+ V P S +P +R LM + +SPI DFYP++ ++D NGK W+
Sbjct: 584 EKDDPFTPFQQLMAVLPERSKELIPTIFRPLMYNQDSPILDFYPSEVKLDRNGKSADWEA 643
Query: 568 IAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
+ + F+D+ RL+ ++ + L ++ARRN D+LF+
Sbjct: 644 VVLISFVDQERLVAAMEPLLKDLEPKDARRNKFGTDILFL 683
>gi|345326399|ref|XP_003431040.1| PREDICTED: LOW QUALITY PROTEIN: 5'-3' exoribonuclease 1-like
[Ornithorhynchus anatinus]
Length = 1614
Score = 327 bits (838), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 187/560 (33%), Positives = 281/560 (50%), Gaps = 95/560 (16%)
Query: 42 SQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSY 101
S F+ ++ GTEFMA L L+Y+++++++ D W+ + + LS PGEGEHKIM +
Sbjct: 26 SHQFNLTLLGWGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYLSGHETPGEGEHKIMEF 85
Query: 102 VRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPG 161
+R ++ +DPNTRHCLYGLDADLIML L +HE HFS+LRE V G+
Sbjct: 86 IRSEKAKKDHDPNTRHCLYGLDADLIMLGLTSHESHFSLLREEVRFSGK----------- 134
Query: 162 HLAANCEGKAKRKAGEFDEKGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEID 218
K V P++ + LH+ +REY+DYEF + F+ D
Sbjct: 135 -------------------KTQRVCAPEETTFHLLHLSLMREYIDYEFSVLKSKISFKYD 175
Query: 219 LECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLR 278
+E I+DD+I M F VGNDF+PH+P L I A+ LL Y LGGY+ + +L
Sbjct: 176 IERIIDDWILMGFLVGNDFIPHLPHLHINHDALPLLYRTYMTTLPELGGYINENGHLNLP 235
Query: 279 RVEHFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFH 338
R E ++ + ++ F + + + +++ G+ A + +
Sbjct: 236 RFEKYLVKLSDFDREHFNEVF---------VDLKWFESKVGNKYLNEAAGIAAEEAKNYK 286
Query: 339 GSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQ 398
+L S + S C+ L+ +G AT +++E D
Sbjct: 287 QKKLKS------QENSICLAALNKTEGE-------------ATTSKSVLE-------DEP 320
Query: 399 ENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRK 458
E+ + F+ + ++ +K YY K + +E
Sbjct: 321 EDDDLFETEFRQ-------------------------YKRTYYMTKMGVEVVS--DEFLA 353
Query: 459 DVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQ 518
D Y + + W++HYYY GV SW WFYPYHYAP+ SD++++ +F I FELG PF PF Q
Sbjct: 354 DQAECYIQAIQWILHYYYHGVQSWSWFYPYHYAPYLSDIRNIKEFKIQFELGKPFMPFEQ 413
Query: 519 LLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEAR 578
LL V P+AS LP Y+ LMT +SPI ++YPTDF+ D+NGK+ W+ + +PFIDE R
Sbjct: 414 LLAVLPAASKDLLPVCYQHLMTSEDSPIIEYYPTDFKTDLNGKQQEWEAVVLIPFIDENR 473
Query: 579 LLDEVKKIEHTLTEEEARRN 598
LL ++ L +EE RN
Sbjct: 474 LLQAMEPCNKNLKKEEETRN 493
>gi|207345483|gb|EDZ72294.1| YGL173Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 1409
Score = 327 bits (837), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 203/587 (34%), Positives = 312/587 (53%), Gaps = 60/587 (10%)
Query: 45 FDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRL 104
FDSN ITPGTEFMA L+ LQY+IH +++ND W ++++I S VPGEGEHKIM+++R
Sbjct: 9 FDSNSITPGTEFMAKLTKNLQYFIHDKISNDSKWREVQIIFSGHEVPGEGEHKIMNFIRH 68
Query: 105 QRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLA 164
++ ++ NTRHC+YGLDADLIML L+TH HF++LRE V T G++
Sbjct: 69 LKSQKDFNQNTRHCIYGLDADLIMLGLSTHGPHFALLREEV-TFGRR------------- 114
Query: 165 ANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECI 222
N E K+ + + + LH+ LREY++ EF+ FE + E I
Sbjct: 115 -NSEKKS---------------LEHQNFYLLHLSLLREYMELEFKEIADEMQFEYNFERI 158
Query: 223 VDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEH 282
+DDFI + F +GNDFLP++P L + +GA +L+ +K+ GY+ + K +L+R+
Sbjct: 159 LDDFILVMFVIGNDFLPNLPDLHLNKGAFPVLLQTFKEALLHTDGYINEHGKINLKRLGV 218
Query: 283 FIQAVGSYEDRIFQKR---ARLHQRHAERIKRE--KAQARRGDDVEPLAQPDSLVPVSRF 337
++ + +E F+K + E I E + + R G + Q + + +
Sbjct: 219 WLNYLSQFELLNFEKDDIDVEWFNKQLENISLEGERKRQRVGKKLLVKQQKKLIGSIKPW 278
Query: 338 HGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAEN----SF 393
+L SP E + L+ K + H +G I +++ S
Sbjct: 279 LMEQLQEKLSPD--LPDEEIPTLELPKDLDMKDHLEFLKEFAFDLGLFITHSKSKGSYSL 336
Query: 394 ETD-----PQENKEEFKAK---LKELLRDKSDAFNSDNPEE---DKVKLGE--PGWKERY 440
+ D P E +EEF+ + +++ ++ +A ++ EE +K E WK Y
Sbjct: 337 KMDLDSINPDETEEEFQNRVNSIRKTIKKYQNAIIVEDKEELETEKTIYNERFERWKHEY 396
Query: 441 YEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDL-KD 499
Y +K T + EE +D+ Y EGL WV++YYY G SW W+YP+HYAP SDL K
Sbjct: 397 YHDKLKFTT--DSEEKVRDLAKDYVEGLQWVLYYYYRGCPSWSWYYPHHYAPRISDLVKG 454
Query: 500 LDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMN 559
LDQ +I F+L PF PF QL+ V P S + +P +R LM D SPI DFYP + ++D N
Sbjct: 455 LDQ-DIEFDLSKPFTPFQQLMAVLPERSKNLIPPTFRPLMYDEQSPIHDFYPAEVQLDKN 513
Query: 560 GKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 606
GK W+ + + F+DE RL++ ++ L+ EE RN D+++
Sbjct: 514 GKTADWEAVVLISFVDEKRLIEAMQPYLCKLSPEEKTRNQFGKDLIY 560
>gi|340520299|gb|EGR50535.1| exoribonuclease [Trichoderma reesei QM6a]
Length = 1029
Score = 327 bits (837), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 158/322 (49%), Positives = 208/322 (64%), Gaps = 7/322 (2%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQV-----FDSNVITPGTE 55
MNQQRSRRFR++++A + +++ L + +R+ + +DS+ FDSN ITPGT
Sbjct: 112 MNQQRSRRFRSAREAKEKEEDKQALIELLKRQNGGVFEAADSEAVVKKAFDSNSITPGTP 171
Query: 56 FMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNT 115
FM +L+++L+Y+ +LN DP W K+K+I+SDA VPGEGEHKIMS++R QR P YDPNT
Sbjct: 172 FMDILAVSLRYWCQYKLNTDPAWAKLKIIISDATVPGEGEHKIMSFIRSQRASPNYDPNT 231
Query: 116 RHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAK-R 173
RH +YGLDADLIML LATHE HF +LRE V F G+ C LCGQ GH A NC G AK
Sbjct: 232 RHVIYGLDADLIMLGLATHEPHFRVLREDVFFNEGKNRACKLCGQKGHEANNCRGTAKPN 291
Query: 174 KAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFV 233
E DE+ V P KP+ +LH+ LREYL E +P+ PF DLE +DD+IFMC FV
Sbjct: 292 DMAEGDEQAKAVQAPLKPFIWLHVSVLREYLAIELSVPDLPFRFDLERAIDDWIFMCCFV 351
Query: 234 GNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDR 293
GNDFLPH+P LEIRE I+ L +++ ++GGY+T L R + + + S E
Sbjct: 352 GNDFLPHLPALEIREHGIDTLTTIWRNSLPSMGGYVTKDGHIDLERAQVILDGLASQESA 411
Query: 294 IFQKRARLHQRHAERIKREKAQ 315
IF++R R KR K Q
Sbjct: 412 IFKRRKEQEDRREASFKRRKLQ 433
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 123/323 (38%), Positives = 182/323 (56%), Gaps = 20/323 (6%)
Query: 427 DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFY 486
D V+L E G+++RYY++KF K P++ E R V Y EGL WV+ YY++G SW+W+Y
Sbjct: 590 DNVRLWEDGYEDRYYQQKF-GKDPQDIE-FRHKVAHAYVEGLAWVLLYYFQGCPSWEWYY 647
Query: 487 PYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPI 546
PYHYAPFA+D KDL + ISFE G +PF QL+ V P+AS HALPE + +LMT+ +S I
Sbjct: 648 PYHYAPFAADFKDLAKMEISFEKGRVSRPFEQLMSVLPAASRHALPEVFHELMTEKDSEI 707
Query: 547 SDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 606
DFYP +FE+D+NGK+ +WQG+A LPFID RLL V+ L+ ++ RN+I D+L
Sbjct: 708 IDFYPEEFEIDLNGKKMAWQGVALLPFIDMKRLLKAVQSKYPLLSPDDIARNTIGKDVLI 767
Query: 607 VLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSP 666
+ +H +Y D+ K++ + +NP S+G+ G I R P
Sbjct: 768 LSDNH---EGLY--DDILTTFYSKKQDRSRLTINPANSNGLAGEIEKQEDSVPHGALRYP 822
Query: 667 VA--SMEDIMGNQVLCAIYKLPD-AHKHVTRPPAGVIFPKKIVQLEDLKPAPVLWHEDSG 723
+ SM D+ + + Y +P + H + GV P + D+ E+
Sbjct: 823 LERRSMPDLDYDHSISVYYDMPQVSQTHKSMLLRGVRMPPPALTRSDI--------EEIR 874
Query: 724 RRPHENGRH--NPHGTISGRQLG 744
+ + GR+ P+G +GRQ G
Sbjct: 875 GKANRGGRNYGRPYGNNNGRQRG 897
>gi|388857586|emb|CCF48735.1| related to dna exoribonuclease Dhp1p [Ustilago hordei]
Length = 1245
Score = 326 bits (836), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 164/327 (50%), Positives = 227/327 (69%), Gaps = 5/327 (1%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKS--DSQVFDSNVITPGTEFMA 58
MNQQRSRRFRA+K+A + E E E++ +G + + + +DSN ITPGT FM
Sbjct: 116 MNQQRSRRFRAAKEAREKHQENESALAEWKAKGLPITDHALQSKKAWDSNAITPGTPFMD 175
Query: 59 VLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHC 118
+L+ +L+Y++ ++N DPGW+ ++VI+SDA+VPGEGEHKIM ++R QR+ P +DPNT+H
Sbjct: 176 LLAASLRYWVAQKINTDPGWKDVQVIISDASVPGEGEHKIMEHIRRQRSHPEHDPNTKHV 235
Query: 119 LYGLDADLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKRKAGE 177
+YGLDADLIML+LATHE +F +LRE VF + K C +CGQPGH AA+C+G K K+GE
Sbjct: 236 IYGLDADLIMLSLATHEPYFKVLREDVFASDNKPKTCNICGQPGHFAASCKGSPKNKSGE 295
Query: 178 FDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDF 237
DEK + KKP+ FL + TLREYL E IP PF DLE +DD++F+ FFVGNDF
Sbjct: 296 HDEKA-QTPPDKKPFIFLDLPTLREYLQVELNIPQLPFAFDLERAIDDWVFLIFFVGNDF 354
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
LPH+P+LEIR+GAI+ L+ ++KKE ++GGYLT+ K L R + + + S ED IF++
Sbjct: 355 LPHLPSLEIRDGAIDTLLRIWKKELPSMGGYLTNHGKVELSRAQLILNGLASEEDDIFRR 414
Query: 298 RARLHQRHAERIKREKA-QARRGDDVE 323
R R KR +A Q RR +++
Sbjct: 415 RKEDEDRRENNKKRREAIQQRREKELD 441
Score = 236 bits (601), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 123/293 (41%), Positives = 179/293 (61%), Gaps = 21/293 (7%)
Query: 426 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 485
+D VK+ EPG++ERYY EKF + + R+ VV Y EGL WV+ YYY+GV SWQW+
Sbjct: 640 QDTVKMWEPGYRERYYREKFGVDLSDT--DFRRQVVKSYIEGLSWVLAYYYQGVPSWQWY 697
Query: 486 YPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 545
YP+H++PFA+D +DL +I FELG PFKPF QL+GV P+ S ++PE + LMT+ +S
Sbjct: 698 YPFHFSPFAADFEDLASLDIKFELGAPFKPFEQLMGVLPADSRASIPEPFHPLMTESDSE 757
Query: 546 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 605
I DFYP++FE+DMNGK+ +WQG+A LPFIDE RLLD +K L+E+E RRN + L
Sbjct: 758 IIDFYPSEFEIDMNGKKMAWQGVALLPFIDEKRLLDALKDKYPLLSEDEVRRNGFGNNTL 817
Query: 606 FVLLSHPLSASIYTLDEHCKQLKIKERVEVKER----LNPELSDGMNGYISPCAGDPHPP 661
FV L D C+++ K+ + +++ +NP L+ G+ GY+ P
Sbjct: 818 FVGNESRL------YDFLCEEIYSKKASDEEKKKAIPINPALTRGITGYVKPDPVCVPGS 871
Query: 662 VFRSPVAS--MEDIMGNQVLCAIYKLPDA---HKHV----TRPPAGVIFPKKI 705
F SP+ S ++DI + + +Y P+ H+ V +PP + P +I
Sbjct: 872 TFNSPLTSQNLQDIHNDCSISVLYDFPEQKTPHRSVLLKGLKPPKPTLSPAEI 924
>gi|427778459|gb|JAA54681.1| Putative 5'-3' exonuclease xrn1/kem1/sep1 involved in dna strand
exchange and mrna turnover, partial [Rhipicephalus
pulchellus]
Length = 856
Score = 324 bits (831), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 171/324 (52%), Positives = 213/324 (65%), Gaps = 27/324 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSD-SQVFDSNVITPGTEFMAV 59
MNQQRSRRFRASK++A+ E R+R E G LPP+ D S+ FDSN ITPGT FM
Sbjct: 111 MNQQRSRRFRASKESAEKVEEMSRIRAELRDRGVPLPPEKDKSEHFDSNCITPGTPFMDR 170
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
L+ L YYIH RLNNDPGW+ I+VILSDANVPGEGEHKIM ++R QR P +DPNT HCL
Sbjct: 171 LAKCLHYYIHDRLNNDPGWKNIQVILSDANVPGEGEHKIMDFIRRQRANPKHDPNTHHCL 230
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
G DADLIML LATHE +F+I+RE F P Q C LCGQ GH +C+G K K GEFD
Sbjct: 231 CGADADLIMLGLATHEPNFTIIRE-EFKPNQPRPCELCGQLGHEMKDCQGLPKEKTGEFD 289
Query: 180 E----------------------KGDEVVVP---KKPYQFLHIWTLREYLDYEFRIPNPP 214
E + DE+ P + + FL + L EYL+ E R+ N P
Sbjct: 290 ELEKPIGSETEFIFLXXPKEKTGEFDELEKPIGSETEFIFLRLNVLHEYLERELRMDNLP 349
Query: 215 FEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSK 274
F+ ++E +DD++FMCFFVGNDFLPH+P+LEIREGAI+ L+ +YKK GGYLT+
Sbjct: 350 FDFNIERAIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNLYKKAVYRTGGYLTENGF 409
Query: 275 PSLRRVEHFIQAVGSYEDRIFQKR 298
+L RV+ + +G ED IF++R
Sbjct: 410 VALNRVQLIMSELGDAEDEIFKRR 433
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 98/162 (60%), Gaps = 8/162 (4%)
Query: 492 PFASDLKDLDQF-NISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDF 549
PF + + L+ + E G PFKP QL+ VFP+AS LP + LM DP+SPI DF
Sbjct: 690 PFVDEKRLLETVQTVXXERGTQPFKPMEQLMSVFPAASKQHLPLPWADLMDDPDSPIIDF 749
Query: 550 YPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLL 609
YPTDF++D+NGK+Y+WQG+A LPF+DE RLL+ V+ + LTE+E +RN+ D+ +V
Sbjct: 750 YPTDFKIDLNGKKYAWQGVALLPFVDEKRLLETVQTVYPHLTEDERKRNTRGDDVFYVRK 809
Query: 610 SHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI 651
H + + L E CK ++ +E P+ G+ G I
Sbjct: 810 GHRGYSYLVGLYEACKDYNMEFDLE------PKYFSGIGGKI 845
>gi|295660622|ref|XP_002790867.1| 5'-3' exoribonuclease [Paracoccidioides sp. 'lutzii' Pb01]
gi|226281119|gb|EEH36685.1| 5'-3' exoribonuclease [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1053
Score = 324 bits (831), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 155/312 (49%), Positives = 215/312 (68%), Gaps = 12/312 (3%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERL-------RQEFEREGRKLPPKSDSQVFDSNVITPG 53
MNQQRSRRFR++++A + A+E+++ +Q ++ ++ + + +DSNVITPG
Sbjct: 132 MNQQRSRRFRSAQEAKE--ADEKKVEFAKLLRKQNGKKSCEEIVEEVIVKTWDSNVITPG 189
Query: 54 TEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDP 113
T FM +L+ AL+Y++ +LN DP WEK+K+I+SDA VPGEGEHKIM ++R QR+ P ++P
Sbjct: 190 TPFMDILAAALRYWVAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFIRSQRSCPEHNP 249
Query: 114 NTRHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAK 172
NTRH +YGLDADLIML LATHE HF +LRE V F + C LCGQ GH+A C+G AK
Sbjct: 250 NTRHVIYGLDADLIMLGLATHEPHFRVLREDVFFQESKGRTCHLCGQTGHIAEACKGTAK 309
Query: 173 RKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFF 232
K GEFDEKG + KP+ +LH+ LREYL E +P PF DLE +DD++FMCFF
Sbjct: 310 EKNGEFDEKGKGSSL--KPFIWLHVSVLREYLAVEMHVPQQPFPFDLERALDDWVFMCFF 367
Query: 233 VGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYED 292
VGNDFLPH+P+L+IRE I+ L+A+++ +GGYLT L R + +Q + ED
Sbjct: 368 VGNDFLPHLPSLDIRENGIDTLIAIWRDNIPVMGGYLTKDGHVDLNRAQLILQGLAKQED 427
Query: 293 RIFQKRARLHQR 304
IF++R + +R
Sbjct: 428 AIFRRRRQTEER 439
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 110/218 (50%), Positives = 147/218 (67%), Gaps = 6/218 (2%)
Query: 420 NSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGV 479
N D+ D V+L E G+ +RYYE+KF P++ E R V Y EGL WV+ YY++G
Sbjct: 583 NDDDLPPDTVRLWEEGYADRYYEQKFQVH-PKDIE-FRHKVARAYVEGLAWVLLYYFQGC 640
Query: 480 CSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLM 539
SW W+YPYHYAPFA+D DL + NI F G PFKPF QL+GV P+AS+HA+PE + LM
Sbjct: 641 PSWTWYYPYHYAPFAADFVDLGKMNIEFNRGAPFKPFEQLMGVLPAASNHAIPEVFHDLM 700
Query: 540 TDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 599
+DPNS I DFYP +F +D+NGK+++WQG+A LPFIDE RLL ++K H L+ EE RNS
Sbjct: 701 SDPNSEIIDFYPEEFPIDLNGKKFAWQGVALLPFIDEKRLLVAMEKRYHLLSSEEHARNS 760
Query: 600 IMADMLFVLLSHP----LSASIYTLDEHCKQLKIKERV 633
+ D+L V HP L+A+ Y+ + +LK+ RV
Sbjct: 761 MGRDVLLVSDRHPLYDNLTANFYSKKQGLPKLKLNMRV 798
>gi|147899710|ref|NP_001091411.1| 5'-3' exoribonuclease 2 [Xenopus laevis]
gi|126631948|gb|AAI33744.1| LOC100049102 protein [Xenopus laevis]
Length = 457
Score = 324 bits (830), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 165/298 (55%), Positives = 205/298 (68%), Gaps = 1/298 (0%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ +S E+ R+R+E +G LP + + FDSN ITPGTEFM L
Sbjct: 111 MNQQRSRRFRASKEGVESVEEKNRIREEVLSKGGYLPKEEMKERFDSNCITPGTEFMDNL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+VPGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 171 AKCLRYYIADRLNNDPGWKNLTVILSDASVPGEGEHKIMDYIRRQRAQPHHDPNTHHCLC 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P Q C LCGQ GH C+G + K GE DE
Sbjct: 231 GADADLIMLGLATHEPYFTIIRE-EFKPNQPRPCGLCGQFGHEIKECQGMPREKKGEHDE 289
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
++ + F+ + LREYL+ E + + PFE D E VDD++FMCFFVGNDFLPH
Sbjct: 290 FAGAPPGCEQEFIFIRLNILREYLEKELTMASLPFEFDFERSVDDWVFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 298
+P+LEIREGAI+ L+ +YK GGYLT+ +L RV+ + AVG ED IF+KR
Sbjct: 350 LPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGFVNLERVQMIMLAVGEVEDNIFKKR 407
>gi|154276492|ref|XP_001539091.1| hypothetical protein HCAG_06696 [Ajellomyces capsulatus NAm1]
gi|150414164|gb|EDN09529.1| hypothetical protein HCAG_06696 [Ajellomyces capsulatus NAm1]
Length = 475
Score = 324 bits (830), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 157/310 (50%), Positives = 211/310 (68%), Gaps = 8/310 (2%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERL-----RQEFEREGRKLPPKSDSQVFDSNVITPGTE 55
MNQQRSRRFR++++A ++ ++E +Q + G L + ++ +DSNVITPGT
Sbjct: 111 MNQQRSRRFRSAQEAKEADEKKEEFAKLLRKQNGSKGGEGLVEEVITKTWDSNVITPGTP 170
Query: 56 FMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNT 115
FM VL+ AL+Y++ +LN DP WE +K+I+SDA VPGEGEHKIM ++R QR+ +DPNT
Sbjct: 171 FMDVLAAALRYWVAYKLNTDPAWENLKIIISDATVPGEGEHKIMEFIRSQRSCAEHDPNT 230
Query: 116 RHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRK 174
RH +YGLDADLIML LATHE HF +LRE V F + C LCGQ GH+A C+G AK K
Sbjct: 231 RHVIYGLDADLIMLGLATHEPHFRVLREDVFFQESKGRTCHLCGQTGHIAEACKGTAKEK 290
Query: 175 AGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVG 234
GEFDEKG P KP+ +LH+ LREYL E +P PF DLE +DD++FMCFFVG
Sbjct: 291 NGEFDEKGKG--SPLKPFIWLHVSVLREYLAVEMHVPQQPFPFDLERALDDWVFMCFFVG 348
Query: 235 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI 294
NDFLPH+P+L+IRE I+ L+A+++ A+ GYLT L R + +Q + ED I
Sbjct: 349 NDFLPHLPSLDIRENGIDTLIAIWRDNIPAMNGYLTKDGHVDLGRAQLILQGLAKQEDAI 408
Query: 295 FQKRARLHQR 304
F++R + +R
Sbjct: 409 FRRRRQTEER 418
>gi|327302674|ref|XP_003236029.1| 5'-3' exoribonuclease [Trichophyton rubrum CBS 118892]
gi|326461371|gb|EGD86824.1| 5'-3' exoribonuclease [Trichophyton rubrum CBS 118892]
Length = 1034
Score = 323 bits (829), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 159/305 (52%), Positives = 212/305 (69%), Gaps = 16/305 (5%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEF------EREGRK---LPPKSDSQVFDSNVIT 51
MNQQRSRRFR+++DA AE+E+ + EF ++ G+K + + ++ +D+NVIT
Sbjct: 111 MNQQRSRRFRSAQDAK---AEDEK-KVEFAKLLKKQKRGKKDVTVAEEVITKTWDTNVIT 166
Query: 52 PGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGY 111
PGT FM +L++AL+Y++ +L+ DPGWEK+KVI+SDA VPGEGEHKIM ++R QR P Y
Sbjct: 167 PGTPFMDILALALRYWVAYKLSTDPGWEKLKVIISDATVPGEGEHKIMEFIRSQRACPEY 226
Query: 112 DPNTRHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGK 170
DPNTRH +YGLDADLIML L THE HF +LRE V F + C LCGQ GH+ C GK
Sbjct: 227 DPNTRHVIYGLDADLIMLGLGTHEPHFRVLREDVFFQESKARTCKLCGQAGHVEEACTGK 286
Query: 171 AKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMC 230
AK K GEFDEK + P KP+ +LH+ LREYL E ++P PF DLE +DD++FMC
Sbjct: 287 AKEKRGEFDEK--QKGNPLKPFIWLHVSVLREYLAVEMQVPQQPFPFDLERALDDWVFMC 344
Query: 231 FFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSY 290
FFVGNDFLPH+P+LEIRE I+ L+A+++ +GGYLT + L + + +Q +
Sbjct: 345 FFVGNDFLPHLPSLEIRENGIDTLIAIWRDNIPQMGGYLTKDGRVDLAKAQLILQGLAKQ 404
Query: 291 EDRIF 295
ED IF
Sbjct: 405 EDAIF 409
>gi|315040952|ref|XP_003169853.1| 5'-3' exoribonuclease 2 [Arthroderma gypseum CBS 118893]
gi|311345815|gb|EFR05018.1| 5'-3' exoribonuclease 2 [Arthroderma gypseum CBS 118893]
Length = 1038
Score = 323 bits (827), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 161/305 (52%), Positives = 210/305 (68%), Gaps = 16/305 (5%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLP-PKSDSQV--------FDSNVIT 51
MNQQRSRRFR+++DA AE+E+ + EF + +K KSD + +D+NVIT
Sbjct: 111 MNQQRSRRFRSAQDAK---AEDEK-KVEFAKLLKKQKRGKSDVTIAEEVIKKTWDTNVIT 166
Query: 52 PGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGY 111
PGT FM +L++AL+Y++ +L+ DPGWEK+K+I+SDA VPGEGEHKIM +VR QR P Y
Sbjct: 167 PGTPFMDILALALRYWVAYKLSTDPGWEKLKIIISDATVPGEGEHKIMEFVRSQRACPEY 226
Query: 112 DPNTRHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGK 170
DPNTRH +YGLDADLIML L THE HF +LRE V F + C LCGQ GH+ C GK
Sbjct: 227 DPNTRHVIYGLDADLIMLGLGTHEPHFRVLREDVFFQESKARTCKLCGQAGHVEEACTGK 286
Query: 171 AKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMC 230
AK K GEFDEK + P KP+ +LH+ LREYL E ++P PF DLE +DD++FMC
Sbjct: 287 AKEKQGEFDEK--QKGSPLKPFIWLHVSILREYLAVEMQVPQQPFPFDLERALDDWVFMC 344
Query: 231 FFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSY 290
FFVGNDFLPH+P+LEIRE I+ L+A+++ +GGYLT + L + + +Q +
Sbjct: 345 FFVGNDFLPHLPSLEIRENGIDTLIAIWRDNIPQMGGYLTKDGRVDLAKAQLILQGLAKQ 404
Query: 291 EDRIF 295
ED IF
Sbjct: 405 EDAIF 409
>gi|268533146|ref|XP_002631701.1| C. briggsae CBR-XRN-2 protein [Caenorhabditis briggsae]
Length = 901
Score = 323 bits (827), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 170/324 (52%), Positives = 215/324 (66%), Gaps = 12/324 (3%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQV---FDSNVITPGTEFM 57
MNQQRSRRFRASK+ A+ AA E R+ EG +P K + FDSN ITPGT FM
Sbjct: 111 MNQQRSRRFRASKEMAEKAASIEEQRRRLIAEGIAVPQKKKDEEEAHFDSNCITPGTPFM 170
Query: 58 AVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRH 117
A L+ AL+YYIH R+ NDP W I++ILSDANVPGEGEHKIM Y+R QR P +DPNT H
Sbjct: 171 ARLADALRYYIHDRVTNDPAWANIEIILSDANVPGEGEHKIMDYIRKQRGNPAHDPNTVH 230
Query: 118 CLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGE 177
CL G DADLIML +ATHE +F+I+RE F P Q C LCGQ GH C G A
Sbjct: 231 CLCGADADLIMLGIATHEANFNIIRE-EFVPNQPRACELCGQYGHELKECRG-----AEN 284
Query: 178 FDEKGDEVVVP---KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVG 234
+ GDE P +K + FL I LREYL+ E +PN PF+ +LE +DD++F+CFFVG
Sbjct: 285 DTDLGDEYCKPEQREKNFIFLRIPVLREYLEKEMAMPNLPFQFNLERALDDWVFLCFFVG 344
Query: 235 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI 294
NDFLPH+P+LEIREGAI+ L+ +YK+ + GYLT P L RVE ++ +G ED I
Sbjct: 345 NDFLPHLPSLEIREGAIDRLIKLYKEMVYEMKGYLTKDGIPELDRVEMIMRGLGKVEDEI 404
Query: 295 FQKRARLHQRHAERIKREKAQARR 318
F++R + +R E K +KA+ ++
Sbjct: 405 FKRRQQDEERFKENQKNKKARMQQ 428
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 142/380 (37%), Positives = 207/380 (54%), Gaps = 40/380 (10%)
Query: 373 VPRLSSGATIGAAIVEAENSFETDPQENKEEFK-------AKLKELLRDKSD---AFNSD 422
+P L I + + E+ Q+++E FK A++++ R + +D
Sbjct: 384 IPELDRVEMIMRGLGKVEDEIFKRRQQDEERFKENQKNKKARMQQYGRKRKAEQPIIITD 443
Query: 423 NPEE--DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVC 480
EE D ++L E GWKERYY KF+ + + + R V Y EGLCWV+ YYY+G
Sbjct: 444 EDEEPKDDIRLYESGWKERYYRAKFDVGSDDV--DFRHRVAWAYVEGLCWVLRYYYQGCS 501
Query: 481 SWQWFYPYHYAPFASDLKDLDQFNISFEL-GHPFKPFNQLLGVFPSASSHALPEHYRKLM 539
SW W++PYHYAPFASD + + +F F PF P QL+ VFP+AS LP ++KLM
Sbjct: 502 SWDWYFPYHYAPFASDFETVGEFKPDFTRPTKPFNPLEQLMSVFPAASKQHLPVEWQKLM 561
Query: 540 TDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 599
T+ SPI D YP DF +D+NGK+Y+WQG+A LPF+DE RLL+ +K + TLT+EE RN+
Sbjct: 562 TEDESPIIDLYPADFRIDLNGKKYAWQGVALLPFVDEQRLLETLKSVYPTLTDEEKYRNT 621
Query: 600 IMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYIS--PCAGD 657
+ +F+ +H + + + K + V+ L+P L +G++G IS A
Sbjct: 622 RGPNRIFIGRNH----KSFAFFQQVAESKSNDLVD----LDPSLLNGVSGKISYDSTATA 673
Query: 658 PHPPVFRSPVASME--DIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKPA- 714
P P F SPV+ E D+ N +C +Y+ P+ PA +FP V+L+ K A
Sbjct: 674 PGLP-FPSPVSHEECQDLPTNCGICVLYEDPEY-------PANYVFPA--VRLDGAKEAE 723
Query: 715 PVLWHEDSGRRPHENGRHNP 734
L ED R +GR NP
Sbjct: 724 KTLRPEDWNER--RDGRFNP 741
>gi|270010451|gb|EFA06899.1| hypothetical protein TcasGA2_TC009846 [Tribolium castaneum]
Length = 975
Score = 322 bits (826), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 167/321 (52%), Positives = 214/321 (66%), Gaps = 10/321 (3%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLP-PKSDSQVFDSNVITPGTEFMAV 59
MNQQRSRRFRA+K+ + E +R+R E G KLP K + FDSN ITPGT FMA
Sbjct: 111 MNQQRSRRFRAAKETVEKINEIKRIRAELLLRGAKLPDEKPKEEHFDSNCITPGTPFMAR 170
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
LS L YYIH RLNNDPGW+ IKVILSDANVPGEGEHKIM ++R QR P +DPNT+HCL
Sbjct: 171 LSNCLHYYIHERLNNDPGWQGIKVILSDANVPGEGEHKIMDFIRRQRAQPDHDPNTQHCL 230
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
G DADLIML LATHE +F+I+RE F P + C +CGQ GH +C G A
Sbjct: 231 CGADADLIMLGLATHEPNFTIIRE-EFKPNKPRPCDICGQLGHEMKDCIGGAASA----- 284
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
E + V + Y F+ + L+EYL+ E ++PN PF+ + E ++DD++FMCFFVGNDFLP
Sbjct: 285 ESDTQKVFAETDYIFVRLNVLKEYLERELQMPNLPFKYEFERVLDDWVFMCFFVGNDFLP 344
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIREGAI+ L+ +YK GG+LT+ +L RV+ + +G ED IF+ R
Sbjct: 345 HLPSLEIREGAIDRLIRLYKDCVYKTGGWLTNSGDVNLERVQLIMSELGKAEDEIFKTR- 403
Query: 300 RLHQRHAERIKREKAQARRGD 320
Q+ + REKA+ RR +
Sbjct: 404 --QQKELQFKAREKAKRRRSE 422
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 129/334 (38%), Positives = 185/334 (55%), Gaps = 31/334 (9%)
Query: 427 DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFY 486
D+V+L E G+K+RYYE KF+ + + + R +V L Y GLCWV+ YYY+G SW+W+Y
Sbjct: 496 DEVRLWEDGFKDRYYESKFDVNS--DNLDFRNNVALHYVRGLCWVLRYYYQGCASWKWYY 553
Query: 487 PYHYAPFASDLKDLDQFNISFEL-GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 545
PYHYAPFASD + + FE PF+P QL+GVFP+ASS +P+ + KLM+DP SP
Sbjct: 554 PYHYAPFASDFVHIAGLSTEFEEDSDPFRPLEQLMGVFPAASSKHVPQPWAKLMSDPESP 613
Query: 546 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 605
I DFYP DF++D+NGK+++WQG+A LPF++E RL + L+ EE RRN D L
Sbjct: 614 IIDFYPEDFKIDLNGKKFAWQGVALLPFVNEDRLFKALAPYYKELSPEEIRRNVRGDDRL 673
Query: 606 FVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI---SPCAGDPHPPV 662
+V + I KQL + +++ VK ++ + +GM G + C +
Sbjct: 674 YVGAKNAGYNQI-------KQLYV-QKISVKMEVHVSI-EGMQGTVLLSDECVD--YGGY 722
Query: 663 FRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPP---AGVIFPKKIVQLEDLKP-APVLW 718
SP+ ++DIM N V C Y+ P P G I P ++++ DL P A W
Sbjct: 723 LDSPIRGLDDIMNNMVSCVKYRDPKYASGFVFPAKKLKGAIDPPRVLKPTDLDPVASRNW 782
Query: 719 HEDSGRRPHENGRHNPHGTISGRQLGEAAHRLVA 752
G P + + LGEA HR+V
Sbjct: 783 RPIIGMVP----------STTRATLGEAGHRMVG 806
>gi|412993025|emb|CCO16558.1| predicted protein [Bathycoccus prasinos]
Length = 1062
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 185/354 (52%), Positives = 235/354 (66%), Gaps = 24/354 (6%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+++A + EEE+LR++ R+G ++PPK +S VFDSNVITPGT FM L
Sbjct: 111 MNQQRSRRFRAAQEAEEKKIEEEKLREKLRRDGIEVPPKIESGVFDSNVITPGTPFMGRL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQR---NLPGYDPNTRH 117
+ AL++Y+ + N D GW+ IKVI+SDA+VPGEGEHK M Y+R QR N GYDPNTRH
Sbjct: 171 AEALKFYVRKKQNTDKGWKNIKVIVSDASVPGEGEHKAMHYIRQQRACANGGGYDPNTRH 230
Query: 118 CLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGE 177
+YGLDADLIMLALATHE HF ILREVVF QQ +P A N AG
Sbjct: 231 VVYGLDADLIMLALATHEPHFHILREVVF---QQ-------KPNESAQNG------GAGA 274
Query: 178 FDEKGDEVVVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGN 235
D+ ++ + +KP+Q L + LREYL + + F ID E + DDF+FMCFFVGN
Sbjct: 275 IDKNAKQIAIARKPFQLLSVTILREYLALDLSPHVLPQTFTIDRERLFDDFVFMCFFVGN 334
Query: 236 DFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 295
DFLPH PTLEIREGAI+LLM +YK+E LGG+L + P+LRRV F++AV +E++IF
Sbjct: 335 DFLPHSPTLEIREGAIDLLMTIYKQELGNLGGHLVEDGTPNLRRVGQFVRAVAQFEEQIF 394
Query: 296 QKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPS 349
QKRA+ + R KREK +R+ SLV S GS AS +P+
Sbjct: 395 QKRAKREAQMRSRRKREKDMSRQ---FYKKNNQGSLVGKSALGGSINASDRAPA 445
Score = 279 bits (714), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 157/394 (39%), Positives = 221/394 (56%), Gaps = 33/394 (8%)
Query: 369 RPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDK 428
+P ++PRL G + A+ F +L ELL K+D D E D
Sbjct: 613 KPSEIPRLKKGDAMEKAV-----------------FLKQLDELLEKKND--REDEMEADN 653
Query: 429 VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPY 488
++LGE GWKERYY+ K + R + + +V + GL WV YYYEG CSW WFYPY
Sbjct: 654 IRLGEIGWKERYYDAKMGSHDLNSRRKVVRGMVEEFIRGLLWVCKYYYEGCCSWGWFYPY 713
Query: 489 HYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISD 548
HYAPFA+D+ DL+ + FELG PFKPF+QL+GV P+AS+HALP + LMTD +SPI D
Sbjct: 714 HYAPFATDMVDLELISTEFELGKPFKPFDQLMGVLPAASAHALPPAFYPLMTDEDSPIID 773
Query: 549 FYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVL 608
FYP F++DMNGKR++WQ +A LP+ID RLL E + ++ TLT EEA RN+I ++L+
Sbjct: 774 FYPKHFDLDMNGKRFAWQAVALLPWIDADRLLTETRNLDCTLTPEEANRNTINIELLYAH 833
Query: 609 LSHPLSASIYTLDEHCKQL---KIKERVEVKERLNPELSDGMNGYISPCA---GDPHPPV 662
+S + + ++ I+E+ +K + +DG G + P GD P
Sbjct: 834 EQLSISKCMLKIANVASKIDDEDIREKCALK--IPAADADGACGEVLPLKTLDGDCCPKQ 891
Query: 663 FRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKPAPVLWHEDS 722
SP+ E+I N+V+CA Y+L K R G + PK I+ D+ P P L+ EDS
Sbjct: 892 IESPMMREENINENRVVCARYRL-GTTKVPPRLLEGTVLPKPILDQSDVPPPPKLFIEDS 950
Query: 723 GRRPHENGRHNPHGTISGRQLGEAAHRLVANSLQ 756
R + +G +G L +A R++ SLQ
Sbjct: 951 RLRVNV---VRTNGNSAG--LNDAGKRILMQSLQ 979
>gi|296817211|ref|XP_002848942.1| exonuclease II Exo2 [Arthroderma otae CBS 113480]
gi|238839395|gb|EEQ29057.1| exonuclease II Exo2 [Arthroderma otae CBS 113480]
Length = 1412
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 217/638 (34%), Positives = 313/638 (49%), Gaps = 99/638 (15%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA E +++ REG ++P K D+ FDSN ITPGTEFM L
Sbjct: 94 MNQQRARRFRTALDA-------ELAKEKAIREGVEMP-KEDA--FDSNCITPGTEFMTKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+I+ +++ D W+ ++V+LS VPGEGEHKIM Y+R + P YDPN RHC
Sbjct: 144 TKQLRYFINKKVSEDAEWQGVEVVLSGHEVPGEGEHKIMEYIRQAKAQPEYDPNMRHC-- 201
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
F+I LC R++ +
Sbjct: 202 -----------------FTI--------------SLCS--------------RESDVWTA 216
Query: 181 KGDEVV-VPKKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGN 235
+ +E+ + + + LH+ +REYL+ EF+ F D+E ++DDFI M FFVGN
Sbjct: 217 EPEEIKELEHQNFYLLHLCIVREYLELEFQELKLDGALQFPFDMERVIDDFILMAFFVGN 276
Query: 236 DFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 295
DFLP++P L I EGA+ + VYK+ LGGY+ + K ++ E + + D F
Sbjct: 277 DFLPNLPNLHINEGALAWMFKVYKEVLPKLGGYVNEHGKINM---ERLRTLLAALSDVEF 333
Query: 296 QKRARLHQRHAERIKREKAQARRGDDVEPLAQPD-----SLVPVSRFHGSRLASGPSPSP 350
R + + K++ GD L PD ++ P + +R+ + P
Sbjct: 334 ----RFFEAEYSDARWLKSKTLGGDQTPTL--PDKPNVLTVTPAQKHIFNRIKKYVTHRP 387
Query: 351 YQQSECVGRLDNGKGTSGRPHK-VPRLSSGATIGAAIV-------------EAENSFETD 396
+S LD + K V +L+ + + V + + D
Sbjct: 388 MDESGHPVPLDLSPSLPAKDRKFVEQLADSLHLKWSSVLDNHDERFLRLQLPVNSDDDDD 447
Query: 397 PQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPG-------WKERYYEEKFNAKT 449
++ E + + +L+ +A + ED E WK++YY+EKF
Sbjct: 448 DDDDDGESQIAILRVLKKYENAKVQETTAEDAQLTAEKKYEKKFQEWKDKYYKEKFGWGL 507
Query: 450 PEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFEL 509
E EE RK + Y +GL WV+ YYY GV SW WFY YHYAP SD+ ++ F+L
Sbjct: 508 -ENTEEMRK-LTENYVQGLQWVLFYYYRGVASWPWFYRYHYAPMISDIHLGLGADVEFKL 565
Query: 510 GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIA 569
G PF PF QL+GV P S +P Y LMT P SPI DFYP DFE+DMNGK+ W+ +
Sbjct: 566 GQPFFPFQQLMGVLPDRSKKIVPVAYHSLMTTPESPIIDFYPRDFELDMNGKKMEWEAVV 625
Query: 570 KLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
K+PFIDE RLL + EH LT +E RN+ + F
Sbjct: 626 KIPFIDEERLLKAMATKEHLLTPDEKARNTFGVTLKFT 663
>gi|440639205|gb|ELR09124.1| hypothetical protein GMDG_03704 [Geomyces destructans 20631-21]
Length = 1005
Score = 320 bits (821), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 160/321 (49%), Positives = 211/321 (65%), Gaps = 8/321 (2%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQ-----VFDSNVITPGTE 55
MNQQRSRRFR++++A + ++ L + + +S S+ +DSN ITPGT
Sbjct: 111 MNQQRSRRFRSAQEAKEKDEDKAELLKMLRSQAGGQVEESTSEAMVTKTWDSNAITPGTP 170
Query: 56 FMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNT 115
FM +L+ +L+Y+ +LN DP W K+KVILSDA VPGEGEHKIM ++R QR+ P +DPNT
Sbjct: 171 FMDILAASLRYWTAYKLNTDPAWAKVKVILSDATVPGEGEHKIMQFIRSQRSSPDHDPNT 230
Query: 116 RHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRK 174
RH +YGLDADLIML LATHE HF +LRE V F + C LC Q GH A C G+AK K
Sbjct: 231 RHVIYGLDADLIMLGLATHEPHFRVLREDVFFQDSKGRTCRLCNQKGHEARECRGQAKEK 290
Query: 175 AGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVG 234
GEFDEK + V P KP+ +LH+ LREYL+ E +PN PF DLE +DD++FMCFFVG
Sbjct: 291 DGEFDEK--DSVQPLKPFIWLHVSVLREYLEAELYVPNQPFRFDLERAIDDWVFMCFFVG 348
Query: 235 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI 294
NDFLPH+P+LEIRE I+ LMA+++ +GGY+T L R + + + ED I
Sbjct: 349 NDFLPHLPSLEIRENGIDTLMAIWRDNIPHMGGYVTKDGHVDLERAQFILDGLAKQEDAI 408
Query: 295 FQKRARLHQRHAERIKREKAQ 315
F++R + +R KR K Q
Sbjct: 409 FRRRRQTEERRDANAKRRKLQ 429
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 116/296 (39%), Positives = 168/296 (56%), Gaps = 14/296 (4%)
Query: 422 DNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCS 481
D D V+L E G+ +RYYE+KF K E R V Y EGL WV+ YY++G S
Sbjct: 574 DEAAVDNVRLWEDGYADRYYEQKF--KVDPRDTEFRHKVAKAYVEGLAWVLLYYFQGCPS 631
Query: 482 WQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTD 541
W+W+YPYHYAPFA+D L I FE G FKPF QL+GV P+AS H +P+ + LMT+
Sbjct: 632 WEWYYPYHYAPFAADFVGLADMKIGFEKGRIFKPFEQLMGVMPAASRHTIPDVFHDLMTN 691
Query: 542 PNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIM 601
+S I +FYP DF +D+NGK+++WQG+A LPFID RLL +++ L E A RN++
Sbjct: 692 EDSEIIEFYPPDFPIDLNGKKFAWQGVALLPFIDAKRLLAAMEQRYPLLPPEVAARNTVG 751
Query: 602 ADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPP 661
D+L V +H S+Y D+ K++ + +LNP +SDG+ G + D + P
Sbjct: 752 NDVLLVSEAH---QSLY--DDIATHFYSKKQGSPQYQLNPRISDGLAGKVE--KNDVYLP 804
Query: 662 --VFRSPV--ASMEDIMGNQVLCAIYKLP-DAHKHVTRPPAGVIFPKKIVQLEDLK 712
P+ SM + ++ + Y +P H H + GV FP + +D++
Sbjct: 805 HGSLTYPLDGDSMPSLDEDRSISVHYDMPRSTHVHKSMLLRGVKFPTPALNQDDIQ 860
>gi|320163497|gb|EFW40396.1| 5'-3' exoribonuclease 2 [Capsaspora owczarzaki ATCC 30864]
Length = 1196
Score = 320 bits (819), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 165/355 (46%), Positives = 224/355 (63%), Gaps = 13/355 (3%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA ++AA+SA + LR + E +G +LP K + FDSN ITPGTEFM L
Sbjct: 111 MNQQRSRRFRAVREAAESATKLAELRAKLEADGVRLPQKKGHK-FDSNCITPGTEFMEQL 169
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
++ L+Y+IH +L DPGW+ IKVILSDANVPGEGEHKIM Y+R QR P YDPN +H +Y
Sbjct: 170 AVCLRYFIHRKLMEDPGWQNIKVILSDANVPGEGEHKIMDYIRHQRAHPEYDPNIKHVMY 229
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE+ F+I+RE F P C +C Q GH + C G+A +
Sbjct: 230 GADADLIMLGLATHEISFTIIRE-EFVPNTPKPCSICNQMGHESTECRGEASVPDSTVEA 288
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNP-PFEIDLECIVDDFIFMCFFVGNDFLP 239
PK + F+ I LREYL +E I PFE D+E +DD++FMCFFVGNDFLP
Sbjct: 289 A--PASGPKN-FIFISIPILREYLSHELLISERLPFEFDIERAIDDWVFMCFFVGNDFLP 345
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIREGA+ L+++Y++ ++GG++TD + + R ++ +G+ ED IFQ+R
Sbjct: 346 HLPSLEIREGALETLLSIYRRRLPSMGGFITDSGQVVVERALEILREIGTMEDSIFQRRH 405
Query: 300 RLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQS 354
+R +R + +R + E P + S+L S SP Q++
Sbjct: 406 SEDERQKRNEQRREQDRKRREQSERTWSPSMQL-------SQLGGPSSSSPAQRA 453
Score = 208 bits (529), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 117/297 (39%), Positives = 164/297 (55%), Gaps = 21/297 (7%)
Query: 429 VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPY 488
V+L E GWKERYY+ KF+ + + R + Y EGLCWV+ YYY+GV SW+W+YPY
Sbjct: 626 VRLWEQGWKERYYQNKFHVSA--DDNDFRSKLAAAYLEGLCWVLQYYYQGVPSWKWYYPY 683
Query: 489 HYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPIS 547
HYAPFASDL N F+ G PF+P QL+GV P+AS + +P+ + KLM+D SPI
Sbjct: 684 HYAPFASDLPAATNVNTKFDKGPRPFRPLEQLMGVLPAASGNFVPKTWAKLMSDDESPIL 743
Query: 548 DFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
DFYPT+FEVDMNGK+ +W G+ LPFI+E RLLD +K + L EE RN + ++++V
Sbjct: 744 DFYPTEFEVDMNGKKAAWMGVVLLPFIEEKRLLDTLKTVYDDLRPEEVERNKLGYEVVYV 803
Query: 608 LLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHP-PVFRSP 666
H S+ T+ + + + P+L M G + P F SP
Sbjct: 804 GHKHAGFDSMCTIYSNSAP-------PLPTEIEPKLFQQMAGKLDHDDAVCLPGSTFISP 856
Query: 667 VASM--EDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKPAPVLWHED 721
+ E + NQ + A Y +P+ P IF K + +P P+L +D
Sbjct: 857 LLEFGQESLDNNQAISAKYFMPEY-------PRDFIF-KATIHPAATRPPPLLTPQD 905
>gi|452983794|gb|EME83552.1| hypothetical protein MYCFIDRAFT_196796 [Pseudocercospora fijiensis
CIRAD86]
Length = 823
Score = 318 bits (816), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 161/326 (49%), Positives = 214/326 (65%), Gaps = 19/326 (5%)
Query: 1 MNQQRSRRFRASKDAA--DSAAEE--ERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEF 56
MNQQRSRRFR++++AA D+ A E R+ E G + +DSN ITPGT F
Sbjct: 116 MNQQRSRRFRSAQEAAEKDAMAAEFHARMVAAGEAGGDDEKNSKPKKTWDSNSITPGTPF 175
Query: 57 MAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTR 116
M +L+ +L+Y+I +L DP WEK+KVI+SDA VPGEGEHKIM++VR QR+ P +DPNTR
Sbjct: 176 MDLLAASLRYWISYKLTTDPAWEKLKVIISDATVPGEGEHKIMNFVRSQRSSPDHDPNTR 235
Query: 117 HCLYGLDADLIMLALATHEVHFSILREVVFT----PGQQDKCFLCGQPGHLAANCEGKAK 172
H +YGLDADLIML LATHE HF +LRE VF PG C C QPGH+AANC GK K
Sbjct: 236 HVIYGLDADLIMLGLATHEPHFRVLREDVFANDTKPGH---CRKCNQPGHIAANCTGKPK 292
Query: 173 RKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFF 232
+ ++VV P KP+ +LH+ LREYL E +PN F DLE +DD++FMCFF
Sbjct: 293 EE--------EDVVKPLKPFIWLHVGILREYLAVEMCVPNQGFRFDLERALDDWVFMCFF 344
Query: 233 VGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYED 292
VGNDFLPH+P+L+IRE I+ L+A+++ +GGY+T L R + ++ + ED
Sbjct: 345 VGNDFLPHLPSLDIREDGIDTLIAIWRDNLPLMGGYVTKDGHVDLARAQMILEGLAKQED 404
Query: 293 RIFQKRARLHQRHAERIKREKAQARR 318
IF++R + AER K+ + + RR
Sbjct: 405 AIFKRRRETEVKAAERQKQREDRERR 430
>gi|255715011|ref|XP_002553787.1| KLTH0E07062p [Lachancea thermotolerans]
gi|238935169|emb|CAR23350.1| KLTH0E07062p [Lachancea thermotolerans CBS 6340]
Length = 1496
Score = 318 bits (816), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 233/676 (34%), Positives = 332/676 (49%), Gaps = 113/676 (16%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA E+ ++ R+G ++P + FDSN ITPGTEFMA L
Sbjct: 94 MNQQRARRFRTAMDA-------EKALEKAIRDGEEIP---KGEPFDSNSITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+IH +++ND W +ILS VPGEGEHKIM Y+R R P Y+ NTRHC+Y
Sbjct: 144 TENLKYFIHDKISNDSAWSSTSIILSGHEVPGEGEHKIMEYIRRMRAQPDYNANTRHCIY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L+TH+ HF++LRE V T G++ K AA E
Sbjct: 204 GLDADLIMLGLSTHDPHFALLREEV-TFGRRQK----------AAPLE------------ 240
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFL 238
+ + LHI LREYL+ EFR + FE D E I+DDFI + F +GNDFL
Sbjct: 241 --------YQNFYLLHISMLREYLELEFREIADDLQFEYDFERILDDFILVMFVIGNDFL 292
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 298
P++P L + +GA +L+ +K+ + GY+ + +L R + ++Q + +E F++
Sbjct: 293 PNLPDLHLNKGAFPVLLQTFKEALKHTDGYINEQGTINLSRFQVWLQYLSEFEMMNFERE 352
Query: 299 ---ARLHQRHAERIKREKAQAR-RGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQS 354
+ E I E + R R L Q +V + + + AS P
Sbjct: 353 DIDVEWFNKQLENISLEGERKRARVGKKLLLKQQKKIVGMIKPWLLKTASHP-------- 404
Query: 355 ECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKA----KLKE 410
LD + ++P L T+G I++ SF + + F A K
Sbjct: 405 -----LDVNNISE---DQIPTL----TLGDEIIKENLSFLKEVAFDLGLFVAHSQSKDNY 452
Query: 411 LLRDKSDAFN-SDNPEEDKVKLGEPGWKERYYEEKF----------NAKTPEEREETRKD 459
L+ D N ++ EE ++ + YE+ K ER E +D
Sbjct: 453 FLQLDVDGINPHESQEERDQRIMSLRKSIKKYEQAILVEDSEELEEEQKIYNERFEKWRD 512
Query: 460 VVLRYTEGLCW--------VMHYYYEGVCSWQWFY------------PYHYAPFASDL-K 498
R G + + Y EG+ W FY YHYAP SD+ K
Sbjct: 513 QYYREKLGFSYYDEDKLRELTETYVEGL-QWVLFYYYRGCQSWSWYYKYHYAPRISDVYK 571
Query: 499 DLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDM 558
L+Q +I F LG PF+PF QL+ V P S + +P YR LM DP SPI+DFYP++ E+D
Sbjct: 572 GLNQ-SIKFNLGKPFRPFQQLMAVLPERSKNLIPTVYRPLMYDPKSPIADFYPSEVELDK 630
Query: 559 NGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV-------LLSH 611
NGK W+ + KL F+DE RL++ + + LT EE RRNS D+ FV +
Sbjct: 631 NGKTADWEAVVKLSFVDENRLIEAMAPYDEKLTPEEKRRNSFGTDLAFVFNPQVDDVYKS 690
Query: 612 PLSASIYTLD-EHCKQ 626
PLS ++ HC +
Sbjct: 691 PLSGIFSDIEHNHCTE 706
>gi|332029616|gb|EGI69505.1| 5'-3' exoribonuclease 1 [Acromyrmex echinatior]
Length = 1679
Score = 318 bits (815), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 201/605 (33%), Positives = 303/605 (50%), Gaps = 104/605 (17%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
+NQQR RRFRA+KDA QE + + +P + + FDSN ITPGT FMA L
Sbjct: 93 INQQRGRRFRAAKDAE---------VQEAKAIAKGIPIPKEKR-FDSNCITPGTLFMAKL 142
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+ ++ +++ D W+K K++ S + VPGEGEHKIM Y+R + Y+ ++ HCLY
Sbjct: 143 GEQLKCFVEHKVSTDDAWKKCKILFSGSEVPGEGEHKIMDYIRYMKASKEYNSDSSHCLY 202
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE +FS+LRE V +F +
Sbjct: 203 GLDADLIMLGLCSHEPNFSLLREEV-------------------------------KFGK 231
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFR-IPNP-PFEIDLECIVDDFIFMCFFVGNDFL 238
+ ++ + + LH+ LREY+++EF I + F D+E I+DD++ M F VGNDF+
Sbjct: 232 QQVKMTPEETKFCLLHLSLLREYIEHEFSPIKDKLSFSFDIEKIIDDWVLMGFLVGNDFI 291
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 298
PH+P L I GA+ +L Y + L GY+ + +L R E F++
Sbjct: 292 PHLPNLHIANGALPILYRAYMEVLPTLEGYINEAGTLNLDRFEKFME------------- 338
Query: 299 ARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSP---YQQSE 355
RL + E+ + A + F S+ P+ S Y+++E
Sbjct: 339 -RLSRLDVEQFNEQYADIK-------------------FFESKTGRRPNESERHIYKKTE 378
Query: 356 CVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDK 415
DN S P K A I + + +F+ D + E++ + ++ D+
Sbjct: 379 -----DN---ESASPKKTQNKDLDALIKSTREMSLGNFDDD--DIFIEYR-NMDLIVDDE 427
Query: 416 SDA--FNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMH 473
SD+ +N + + K+ YY K + +E E + Y + W +H
Sbjct: 428 SDSEIYNMEFVQH----------KKDYYMNKLEYENVDE--EVLRSQAEGYVRAIQWNLH 475
Query: 474 YYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPE 533
YYY G CSW W+YP+HYAP+ SD+KD + F+LG PF PF QLL V P+ S LP
Sbjct: 476 YYYHGCCSWSWYYPHHYAPYISDIKDFKDLKLEFDLGQPFLPFQQLLAVLPAFSKDLLPM 535
Query: 534 HYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEE 593
++ L+T+ SPI ++YP +F+ D+NGKR W+ + +PFIDE LL ++ LT E
Sbjct: 536 AFQSLLTEETSPIINYYPHNFKTDLNGKRQEWEAVVLIPFIDEKLLLAAMQPHLSRLTLE 595
Query: 594 EARRN 598
E RN
Sbjct: 596 EQARN 600
>gi|321260270|ref|XP_003194855.1| strand exchange protein (5'-3' exoribonuclease) [Cryptococcus
gattii WM276]
gi|317461327|gb|ADV23068.1| Strand exchange protein (5'-3' exoribonuclease), putative
[Cryptococcus gattii WM276]
Length = 1129
Score = 318 bits (814), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 159/328 (48%), Positives = 222/328 (67%), Gaps = 11/328 (3%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKS-DSQVFDSNVITPGTEFMAV 59
MNQQRSRRFRA+++AAD E + + FE G + ++ + + +D+N ITPGT FM +
Sbjct: 116 MNQQRSRRFRAAQEAADKEEERKEAVKLFEAMGHTVSEETANRKSWDTNAITPGTPFMDL 175
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
LSI+L+Y++ +L DPGW+ +K+ILSD++VPGEGEHKIM ++R QR+ P +D NT H +
Sbjct: 176 LSISLKYWVSYKLTTDPGWKDLKIILSDSSVPGEGEHKIMDWIRRQRSYPTWDANTSHVI 235
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQD--KCFLCGQPGHLAANCEGKAKRKAGE 177
YGLDADLIML+LATHE HF +LRE VF + C CG+ GH+AANC+G K K
Sbjct: 236 YGLDADLIMLSLATHEPHFRVLREDVFAQSSKGPPACKNCGKVGHIAANCKGDKKVK--- 292
Query: 178 FDEKGDEVVVPK--KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGN 235
D EV + KP+ FL + LREYL E +P PF DLE +DD+IFM FFVGN
Sbjct: 293 -DPNVVEVAKTEDPKPFIFLDVACLREYLAIELVVPGVPFPFDLELAIDDWIFMIFFVGN 351
Query: 236 DFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 295
DFLPH+P+LEIREGAI++L+ +++ E +GGYLT+ K +L R + ++ + ED IF
Sbjct: 352 DFLPHLPSLEIREGAIDVLLKIWRAELPRMGGYLTNHGKVNLDRAQVILEGLAKSEDEIF 411
Query: 296 QKRARLHQR--HAERIKREKAQARRGDD 321
QKR +R H+++ +R + R+ +D
Sbjct: 412 QKRKDDEERQEHSQKRRRIEEHKRQDED 439
Score = 231 bits (590), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 125/273 (45%), Positives = 164/273 (60%), Gaps = 19/273 (6%)
Query: 426 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 485
ED +KL EPG++ERYYE+KF K ERE K V Y EGLCWV+ YYY+GV +W WF
Sbjct: 688 EDDIKLWEPGYRERYYEKKFGVKL-SEREFIDK-VTKSYMEGLCWVLEYYYQGVPAWDWF 745
Query: 486 YPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 545
YPYHYAPFA D + + +I FE PFKPF QLLGVFP+AS LPE + LM D +SP
Sbjct: 746 YPYHYAPFAQDFRSVGSMDIKFETSMPFKPFAQLLGVFPAASRIHLPEPLQTLMIDEDSP 805
Query: 546 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 605
I DFYP DFE+DMNGK+ +WQG+A LPFID+ RLL +K E L+++E RRNS +++
Sbjct: 806 ILDFYPPDFEIDMNGKKMAWQGVALLPFIDQNRLLTALKSKEELLSDDEKRRNSWGDNVM 865
Query: 606 FVLLSHPLSASIYTLDEHCKQ---LKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPV 662
F+ +PL D C + L+ K+ + + + S GM G + P
Sbjct: 866 FIANENPL------YDLFCDKLYGLRAKDPIPIDTK----ASYGMTGSVLPDPNCVPAST 915
Query: 663 FRSPVASME---DIMGNQVLCAIYKLP-DAHKH 691
F +P+ S+ D+ N + Y P AH H
Sbjct: 916 FDTPIPSISECPDLNPNDSISVRYYFPRQAHPH 948
>gi|242070073|ref|XP_002450313.1| hypothetical protein SORBIDRAFT_05g003583 [Sorghum bicolor]
gi|241936156|gb|EES09301.1| hypothetical protein SORBIDRAFT_05g003583 [Sorghum bicolor]
Length = 555
Score = 317 bits (813), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 213/634 (33%), Positives = 299/634 (47%), Gaps = 145/634 (22%)
Query: 117 HCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAG 176
HCLYGLDADLIMLALA+HE+HFSILRE V Q + C + E +++ G
Sbjct: 2 HCLYGLDADLIMLALASHELHFSILREDVLRSTQPENCIPLSKE---LFKTEDSSRKCRG 58
Query: 177 EFDEKGDEVVV----PKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFF 232
F + PKKPYQFL+IW LREYL+ + +IPNP + D+E ++DDFIF+CF
Sbjct: 59 WFPRMTETTASRDRSPKKPYQFLNIWVLREYLELDLKIPNPVVKTDIERLIDDFIFICFL 118
Query: 233 VGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYED 292
GNDF+PH+P++EI EGAI+LL+ VYK+ F +GGY+ S E
Sbjct: 119 TGNDFIPHIPSVEIHEGAIDLLLEVYKQAFNKMGGYIV------------------STEK 160
Query: 293 RIFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQ 352
R+ QR+ R E+ + R D++E PD GP +
Sbjct: 161 RL--------QRNLVRRAAEEWKERNYDNME--ENPD---------------GPDLTVKS 195
Query: 353 QSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELL 412
S G N + T+ N E + LK+ L
Sbjct: 196 SSTNGGICTNSQVTA--------------------------------NTLELRRNLKDTL 223
Query: 413 RDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVL---------- 462
R+K D S + D ++LG GWK R++ EKF + E + + D+V+
Sbjct: 224 RNKQDLVKSGACKHDAIRLGFAGWKSRFFREKFGVEKSNEVGKLKNDMVMIFSCLCANKI 283
Query: 463 ------RYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPF 516
+Y EGLCWV+ YY+ V SW W+YP++YAPF SD + L
Sbjct: 284 LIPVVQKYLEGLCWVLRYYFADVPSWSWYYPFYYAPFTSDFEGL---------------- 327
Query: 517 NQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDE 576
+ S ALP+ YR+LM + S I FYP+D ++D +GKR+ WQGIA LPFIDE
Sbjct: 328 ---------SHSCALPKCYRELMENEESLIKKFYPSDLQIDTHGKRFLWQGIAMLPFIDE 378
Query: 577 ARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPL---SASIYTLDEHCKQLKIKERV 633
L K +E L E RN++ D +F+ S+ SA + T D K L
Sbjct: 379 KLLTSATKTVEDKLAVHEINRNTVRQDKIFLRNSNTTPNGSAFVETSDCSSKML------ 432
Query: 634 EVKERLNPELSDGMNGYISPCAGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPDAHKHV 692
L+P S+ + G +SP + FRSP+ ++DI ++ P+ K +
Sbjct: 433 ----LLDPSTSE-LGGRLSPVDDNSISCGFFRSPIRDLQDI------SFLFSNPEPVKII 481
Query: 693 TRPPAGVIFPKKIVQLEDLKPAPVLWHEDSGRRP 726
R V P+K V ++ P LWH G P
Sbjct: 482 PRLLDNVKKPEKNVTETEISKRP-LWHTYPGSWP 514
>gi|189239340|ref|XP_973739.2| PREDICTED: similar to CG10354 CG10354-PA [Tribolium castaneum]
Length = 867
Score = 316 bits (810), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 164/316 (51%), Positives = 210/316 (66%), Gaps = 10/316 (3%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLP-PKSDSQVFDSNVITPGTEFMAV 59
MNQQRSRRFRA+K+ + E +R+R E G KLP K + FDSN ITPGT FMA
Sbjct: 111 MNQQRSRRFRAAKETVEKINEIKRIRAELLLRGAKLPDEKPKEEHFDSNCITPGTPFMAR 170
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
LS L YYIH RLNNDPGW+ IKVILSDANVPGEGEHKIM ++R QR P +DPNT+HCL
Sbjct: 171 LSNCLHYYIHERLNNDPGWQGIKVILSDANVPGEGEHKIMDFIRRQRAQPDHDPNTQHCL 230
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
G DADLIML LATHE +F+I+RE F P + C +CGQ GH +C G A
Sbjct: 231 CGADADLIMLGLATHEPNFTIIRE-EFKPNKPRPCDICGQLGHEMKDCIGGAASA----- 284
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
E + V + Y F+ + L+EYL+ E ++PN PF+ + E ++DD++FMCFFVGNDFLP
Sbjct: 285 ESDTQKVFAETDYIFVRLNVLKEYLERELQMPNLPFKYEFERVLDDWVFMCFFVGNDFLP 344
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIREGAI+ L+ +YK GG+LT+ +L RV+ + +G ED IF+ R
Sbjct: 345 HLPSLEIREGAIDRLIRLYKDCVYKTGGWLTNSGDVNLERVQLIMSELGKAEDEIFKTR- 403
Query: 300 RLHQRHAERIKREKAQ 315
Q+ + REK+
Sbjct: 404 --QQKELQFKAREKSM 417
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 165/492 (33%), Positives = 240/492 (48%), Gaps = 87/492 (17%)
Query: 382 IGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEE--------------- 426
I + + +AE+ Q+ + +FKA+ K +L D+ +S+ ++
Sbjct: 388 IMSELGKAEDEIFKTRQQKELQFKAREKSML-TPVDSQSSNRGQKRHHEDDDESDDDQAH 446
Query: 427 DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFY 486
D+V+L E G+K+RYYE KF+ + + + R +V L Y GLCWV+ YYY+G SW+W+Y
Sbjct: 447 DEVRLWEDGFKDRYYESKFDVNS--DNLDFRNNVALHYVRGLCWVLRYYYQGCASWKWYY 504
Query: 487 PYHYAPFASDLKDLDQFNISFEL-GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 545
PYHYAPFASD + + FE PF+P QL+GVFP+ASS +P+ + KLM+DP SP
Sbjct: 505 PYHYAPFASDFVHIAGLSTEFEEDSDPFRPLEQLMGVFPAASSKHVPQPWAKLMSDPESP 564
Query: 546 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 605
I DFYP DF++D+NGK+++WQG+A LPF++E RL + L+ EE RRN D L
Sbjct: 565 IIDFYPEDFKIDLNGKKFAWQGVALLPFVNEDRLFKALAPYYKELSPEEIRRNVRGDDRL 624
Query: 606 FVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI---SPCAGDPHPPV 662
+V + I L + +++ +K V V +GM G + C +
Sbjct: 625 YVGAKNAGYNQIKQL--YVQKISVKMEVHVS-------IEGMQGTVLLSDECVD--YGGY 673
Query: 663 FRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPP---AGVIFPKKIVQLEDLKP-APVLW 718
SP+ ++DIM N V C Y+ P P G I P ++++ DL P A W
Sbjct: 674 LDSPIRGLDDIMNNMVSCVKYRDPKYASGFVFPAKKLKGAIDPPRVLKPTDLDPVASRNW 733
Query: 719 HEDSGRRPHENGRHNPHGTISGRQLGEAAHRLVANSLQHMKVDRNGYGDRMHGSPLPYAA 778
G P + + LGEA HR+V + P PY+
Sbjct: 734 RPIIGMVP----------STTRATLGEAGHRMVGHHFP-------------KSGPGPYS- 769
Query: 779 APYVPPVPSYQEYGVYDQGYNRFSQPRTDSYPAGHSQSSISAAQPPYDGGYSQHYASNTS 838
+VPP PS + N + Q R +Y GHSQ GGYS S
Sbjct: 770 --HVPP-PSNMDR------RNNYHQNRGSNY--GHSQ-----------GGYS----SYNQ 803
Query: 839 HHPNRRYHPQYD 850
H +R Y YD
Sbjct: 804 GHNSRGYQSGYD 815
>gi|358253113|dbj|GAA52094.1| 5'-3' exoribonuclease 2 [Clonorchis sinensis]
Length = 1234
Score = 315 bits (807), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 201/576 (34%), Positives = 303/576 (52%), Gaps = 62/576 (10%)
Query: 192 YQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAI 251
+ F+H+ LREYL + ++ FE DLE ++DD++FMCFFVGNDFLPH+P+LEIREGAI
Sbjct: 249 FIFIHLNVLREYLAQDLKLTGLTFEWDLERVIDDWVFMCFFVGNDFLPHLPSLEIREGAI 308
Query: 252 NLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR--ARLHQRHAERI 309
+ L+ +YK + GG+LT K + RV+ + +G ED IF+ R + L+ R +R
Sbjct: 309 DRLIEIYKSAVQTTGGWLTHSGKVHMDRVQLIMVELGKMEDEIFKNRRQSELNFRKRKRD 368
Query: 310 KREK---------------AQARRGDDVEPL---AQPDSLVPVSRFHGSRLASGPSPSPY 351
+ + A RG +EP+ + P R+ G +++
Sbjct: 369 NQSRDSSPSPQRMGQRPSWNTAPRGGILEPVPLGGRYGVAHPQGRYRGPSVSAAEIHQAR 428
Query: 352 Q-------QSECVGR-LDNGKGTSG-----RPHKVPRLSS-GATIGAAIVEAEN--SFET 395
Q + V R L+N + + RP + S+ G G+A+ A++ S
Sbjct: 429 QYHSNGSHNVDWVDRNLNNLEAATAMKAMLRPRRPGEKSTQGGPEGSALTSADDGPSPSR 488
Query: 396 DPQENKEEFK---------AKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFN 446
P+ + E+ + A +K L +D + D+V+L E GW+ RYY+ KF
Sbjct: 489 KPRLSIEQKRGLLGGVGADAVMKSLPKDSDYDQDDVADANDEVRLWEDGWRTRYYQSKFG 548
Query: 447 AKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNIS 506
P + E V Y +GLCWV+ YYY+G SW W++PYHYAPFASD +DQ +
Sbjct: 549 VD-PADAPEFCIQVGKEYAKGLCWVLAYYYQGCASWDWYFPYHYAPFASDFIGIDQLDPG 607
Query: 507 FEL--GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYS 564
F+ PF+P QL+GVFP+ S +P ++ LMTDP+SPI DFYPTDF+VD+NGKRY
Sbjct: 608 FDKVKTQPFRPLEQLMGVFPADSRSHVPPAWQTLMTDPDSPIIDFYPTDFKVDLNGKRYL 667
Query: 565 WQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSA---SIYTLD 621
W G+A LPF+DE RLL + + H L++EE RN D LF +HPL++ ++Y+ +
Sbjct: 668 WMGVALLPFVDEVRLLKALDERRHLLSDEEVARNIRGPDRLFCRDTHPLASALEALYSKN 727
Query: 622 EHCKQLKIKERV-EVKERLNPELSDGMNGYISPCAGDPHPPVFRSPV---ASMEDIMGNQ 677
E + V L+P L+ G++G++ P + P R P A + D+ +
Sbjct: 728 ETDLNTNSGKLVPNSASVLDPRLTHGVSGHVWPDRQYAYLPGTRVPSGVPALLPDLKTSH 787
Query: 678 VLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKP 713
+ Y P P G IFP ++++ L P
Sbjct: 788 TVSVCYADPSY-------PDGFIFPAELLKSVKLPP 816
>gi|322801303|gb|EFZ21990.1| hypothetical protein SINV_11797 [Solenopsis invicta]
Length = 1572
Score = 314 bits (804), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 199/600 (33%), Positives = 291/600 (48%), Gaps = 107/600 (17%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
+NQQR RRFR++KDA A+ + E R FDSN ITPGT FMA L
Sbjct: 93 INQQRGRRFRSAKDAEIQEAKAIAKGVQIPTEKR----------FDSNCITPGTLFMAKL 142
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+ ++ +++ D GW+K K++ S A VPGEGEHKIM Y+R + YD N+RHCLY
Sbjct: 143 GDLLKRFVEYKISVDEGWKKCKILFSGAEVPGEGEHKIMDYIRYMKASEDYDSNSRHCLY 202
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE +FS+LRE V +F +
Sbjct: 203 GLDADLIMLGLCSHEPNFSLLREEV-------------------------------KFGK 231
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFR-IPNP-PFEIDLECIVDDFIFMCFFVGNDFL 238
+ + + + LH+ LR+Y+++EF I + F D+E I+DD++ M F VGNDF+
Sbjct: 232 QQVKTTPEETKFCLLHLSLLRKYIEHEFSPIKDKLSFPFDIEKIIDDWVLMGFLVGNDFI 291
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 298
PH+P L I GA+ +L Y + L +E +I G+ + F+K
Sbjct: 292 PHLPNLHIANGALPILYRAYME---------------VLPTLEGYINEAGTLQLDRFEK- 335
Query: 299 ARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVG 358
E++ R DVE + + + +F ++ P+ S +
Sbjct: 336 ------FMEKLSRL--------DVEQFNEHYADI---KFFEAKTGRRPNES---ERHVYK 375
Query: 359 RLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDA 418
+L++ S P+ + + A I E+ RD D
Sbjct: 376 KLEDSNSVS------PKKTQNKDLDALI-------------------KSTTEMYRD-MDL 409
Query: 419 FNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEG 478
D + D + K+ YY K + +E E + Y + W +HYYY G
Sbjct: 410 MIDDESDSDIYNMEFVQHKKDYYMNKLEYENVDE--EVLRSQAEGYVRAIQWNLHYYYHG 467
Query: 479 VCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKL 538
CSW W+YP+HYAP+ SD+KD + FELG PF PF QLL V P+ S LP+ ++ L
Sbjct: 468 CCSWSWYYPHHYAPYISDIKDFKDLKLEFELGEPFLPFQQLLAVLPAYSKALLPDAFQSL 527
Query: 539 MTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
+T+ +SPI +YP +F+ D+NGKR W+ + +PFIDE LL ++ LT EE RN
Sbjct: 528 LTEESSPIISYYPHNFKTDLNGKRQEWEAVVLIPFIDEKLLLSAMQPHLSRLTMEEQARN 587
>gi|405121347|gb|AFR96116.1| 5'-3' exoribonuclease 2 [Cryptococcus neoformans var. grubii H99]
Length = 1129
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 158/328 (48%), Positives = 221/328 (67%), Gaps = 11/328 (3%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKS-DSQVFDSNVITPGTEFMAV 59
MNQQRSRRFRA+++AAD E + + FE G + ++ + + +D+N ITPGT FM +
Sbjct: 116 MNQQRSRRFRAAQEAADKEEERKEAIKLFEAMGHAVSEETANHKSWDTNAITPGTPFMDL 175
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
LSI+L+Y++ +L DPGW+ +K+ILSD++VPGEGEHKIM ++R QR+ P +D NT H +
Sbjct: 176 LSISLKYWVSHKLTTDPGWKDLKIILSDSSVPGEGEHKIMDWIRRQRSYPTWDANTSHVI 235
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQD--KCFLCGQPGHLAANCEGKAKRKAGE 177
YGLDADLIML+LATHE HF +LRE VF + C CG+ GH+AANC+ K K
Sbjct: 236 YGLDADLIMLSLATHEPHFRVLREDVFAQSSKGPPACKNCGKVGHIAANCKSDKKVK--- 292
Query: 178 FDEKGDEVVVPK--KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGN 235
D EV + KP+ FL + LREYL E +P PF DLE +DD+IFM FFVGN
Sbjct: 293 -DPNVVEVAKTEDPKPFIFLDVACLREYLAIELVVPGVPFPFDLELAIDDWIFMIFFVGN 351
Query: 236 DFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 295
DFLPH+P+LEIREGAI++L+ +++ E +GGYLT+ K +L R + ++ + ED IF
Sbjct: 352 DFLPHLPSLEIREGAIDVLLKIWRAELPRMGGYLTNHGKVNLDRAQVILEGLAKSEDEIF 411
Query: 296 QKRARLHQR--HAERIKREKAQARRGDD 321
QKR +R H+++ +R + R+ +D
Sbjct: 412 QKRKDDEERQEHSQKRRRLEEHKRQDED 439
Score = 231 bits (590), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 126/272 (46%), Positives = 165/272 (60%), Gaps = 14/272 (5%)
Query: 426 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 485
ED VKL EPG++ERYYE+KF K ERE K V Y EGLCWV+ YYY+GV +W WF
Sbjct: 685 EDDVKLWEPGYRERYYEKKFGVKL-SEREFIDK-VTKSYMEGLCWVLEYYYQGVPAWDWF 742
Query: 486 YPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 545
YPYHYAPFA D +D+ +I FE PFKPF QLLGVFP+AS LPE + LM D +SP
Sbjct: 743 YPYHYAPFAQDFRDVGSMDIKFETSIPFKPFAQLLGVFPAASRIHLPEPLQTLMIDEDSP 802
Query: 546 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 605
I DFYP DFE+DMNGK+ +WQG+A LPFID+ RLL +K E L+++E RRNS +++
Sbjct: 803 ILDFYPPDFEIDMNGKKMAWQGVALLPFIDQNRLLTALKSKEELLSDDEKRRNSWGDNVM 862
Query: 606 FVLLSHPLSASIYTLDEHCKQLKIKERVEVKE--RLNPELSDGMNGYISPCAGDPHPPVF 663
F+ +PL D C +L +V + ++ + S G+ G + P F
Sbjct: 863 FIANENPL------YDLFCDKLYGLRAKDVNKPIPIDTKASYGITGSVLPDPNCVPASTF 916
Query: 664 RSPVASME---DIMGNQVLCAIYKLP-DAHKH 691
+P+ S+ D+ N + Y P AH H
Sbjct: 917 DTPIPSISECPDLNPNDSISVRYYFPRQAHPH 948
>gi|58268722|ref|XP_571517.1| 5'-3' exoribonuclease [Cryptococcus neoformans var. neoformans
JEC21]
gi|338819739|sp|P0CL88.1|XRN2_CRYNJ RecName: Full=5'-3' exoribonuclease 2
gi|57227752|gb|AAW44210.1| 5'-3' exoribonuclease, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1127
Score = 313 bits (801), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 158/328 (48%), Positives = 220/328 (67%), Gaps = 11/328 (3%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKS-DSQVFDSNVITPGTEFMAV 59
MNQQRSRRFRA+++AAD E + FE G + ++ + + +D+N ITPGT FM +
Sbjct: 116 MNQQRSRRFRAAQEAADKEEERREAIKLFEAMGHAVSEETANHKSWDTNAITPGTPFMDL 175
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
LSI+L+Y++ +L DPGW+ +K+ILSD++VPGEGEHKIM ++R QR+ P +D NT H +
Sbjct: 176 LSISLKYWVSHKLTTDPGWKDLKIILSDSSVPGEGEHKIMDWIRRQRSYPTWDANTSHVI 235
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQD--KCFLCGQPGHLAANCEGKAKRKAGE 177
YGLDADLIML+LATHE HF +LRE VF + C CG+ GH+AANC+ K K
Sbjct: 236 YGLDADLIMLSLATHEPHFRVLREDVFAQSSKGPHACKNCGKVGHIAANCKSDKKFK--- 292
Query: 178 FDEKGDEVVVPK--KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGN 235
D EV + KP+ FL + LREYL E +P PF DLE +DD+IFM FFVGN
Sbjct: 293 -DPNVAEVAKTEDPKPFIFLDVACLREYLAVELVVPGMPFPFDLELAIDDWIFMIFFVGN 351
Query: 236 DFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 295
DFLPH+P+LEIREGAI++L+ +++ E +GGYLT+ K +L R + ++ + ED IF
Sbjct: 352 DFLPHLPSLEIREGAIDVLLKIWRAELPRMGGYLTNHGKVNLDRAQVILEGLAKSEDEIF 411
Query: 296 QKRARLHQR--HAERIKREKAQARRGDD 321
QKR +R H+++ +R + R+ +D
Sbjct: 412 QKRKDDEERQEHSQKRRRIEEHKRQDED 439
Score = 231 bits (590), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 126/273 (46%), Positives = 165/273 (60%), Gaps = 19/273 (6%)
Query: 426 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 485
ED VKL EPG++ERYYE+KF K ERE K V Y EGLCWV+ YYY+GV +W WF
Sbjct: 686 EDDVKLWEPGYRERYYEKKFGVKL-SEREFIDK-VTKSYMEGLCWVLEYYYQGVPAWDWF 743
Query: 486 YPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 545
YPYHYAPFA D +D+ +I FE PFKPF QLLGVFP+AS LPE + LM D +SP
Sbjct: 744 YPYHYAPFAQDFRDVGSMDIKFETSIPFKPFAQLLGVFPAASRIHLPEPLQTLMIDEDSP 803
Query: 546 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 605
I DFYP DFE+DMNGK+ +WQG+A LPFID+ RLL +K E L+++E RRNS +++
Sbjct: 804 ILDFYPPDFEIDMNGKKMAWQGVALLPFIDQNRLLTALKSKEELLSDDEKRRNSWGDNVM 863
Query: 606 FVLLSHPLSASIYTLDEHCKQ---LKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPV 662
F+ +PL D C + L+ K+ + + + S G+ G + P
Sbjct: 864 FIANENPL------YDLFCDKLYGLRAKDPIPIDTK----ASYGITGSVLPDPNCVPAST 913
Query: 663 FRSPVASME---DIMGNQVLCAIYKLP-DAHKH 691
F +P+ S+ D+ N + Y P AH H
Sbjct: 914 FDTPIPSISECPDLNPNDSISVRYYFPRQAHPH 946
>gi|134113168|ref|XP_774609.1| hypothetical protein CNBF2890 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338819738|sp|P0CL89.1|XRN2_CRYNB RecName: Full=5'-3' exoribonuclease 2
gi|50257253|gb|EAL19962.1| hypothetical protein CNBF2890 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1130
Score = 313 bits (801), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 158/328 (48%), Positives = 220/328 (67%), Gaps = 11/328 (3%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKS-DSQVFDSNVITPGTEFMAV 59
MNQQRSRRFRA+++AAD E + FE G + ++ + + +D+N ITPGT FM +
Sbjct: 116 MNQQRSRRFRAAQEAADKEEERREAIKLFEAMGHAVSEETANHKSWDTNAITPGTPFMDL 175
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
LSI+L+Y++ +L DPGW+ +K+ILSD++VPGEGEHKIM ++R QR+ P +D NT H +
Sbjct: 176 LSISLKYWVSHKLTTDPGWKDLKIILSDSSVPGEGEHKIMDWIRRQRSYPTWDANTSHVI 235
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQD--KCFLCGQPGHLAANCEGKAKRKAGE 177
YGLDADLIML+LATHE HF +LRE VF + C CG+ GH+AANC+ K K
Sbjct: 236 YGLDADLIMLSLATHEPHFRVLREDVFAQSSKGPHACKNCGKVGHIAANCKSDKKFK--- 292
Query: 178 FDEKGDEVVVPK--KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGN 235
D EV + KP+ FL + LREYL E +P PF DLE +DD+IFM FFVGN
Sbjct: 293 -DPNVAEVAKTEDPKPFIFLDVACLREYLAVELVVPGMPFPFDLELAIDDWIFMIFFVGN 351
Query: 236 DFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 295
DFLPH+P+LEIREGAI++L+ +++ E +GGYLT+ K +L R + ++ + ED IF
Sbjct: 352 DFLPHLPSLEIREGAIDVLLKIWRAELPRMGGYLTNHGKVNLDRAQVILEGLAKSEDEIF 411
Query: 296 QKRARLHQR--HAERIKREKAQARRGDD 321
QKR +R H+++ +R + R+ +D
Sbjct: 412 QKRKDDEERQEHSQKRRRIEEHKRQDED 439
Score = 231 bits (590), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 126/272 (46%), Positives = 165/272 (60%), Gaps = 14/272 (5%)
Query: 426 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 485
ED VKL EPG++ERYYE+KF K ERE K V Y EGLCWV+ YYY+GV +W WF
Sbjct: 686 EDDVKLWEPGYRERYYEKKFGVKL-SEREFIDK-VTKSYMEGLCWVLEYYYQGVPAWDWF 743
Query: 486 YPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 545
YPYHYAPFA D +D+ +I FE PFKPF QLLGVFP+AS LPE + LM D +SP
Sbjct: 744 YPYHYAPFAQDFRDVGSMDIKFETSIPFKPFAQLLGVFPAASRIHLPEPLQTLMIDEDSP 803
Query: 546 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 605
I DFYP DFE+DMNGK+ +WQG+A LPFID+ RLL +K E L+++E RRNS +++
Sbjct: 804 ILDFYPPDFEIDMNGKKMAWQGVALLPFIDQNRLLTALKSKEELLSDDEKRRNSWGDNVM 863
Query: 606 FVLLSHPLSASIYTLDEHCKQLKIKERVEVKE--RLNPELSDGMNGYISPCAGDPHPPVF 663
F+ +PL D C +L +V + ++ + S G+ G + P F
Sbjct: 864 FIANENPL------YDLFCDKLYGLRAKDVSKPIPIDTKASYGITGSVLPDPNCVPASTF 917
Query: 664 RSPVASME---DIMGNQVLCAIYKLP-DAHKH 691
+P+ S+ D+ N + Y P AH H
Sbjct: 918 DTPIPSISECPDLNPNDSISVRYYFPRQAHPH 949
>gi|241786594|ref|XP_002414458.1| 5'->3' exoribonuclease, putative [Ixodes scapularis]
gi|215508669|gb|EEC18123.1| 5'->3' exoribonuclease, putative [Ixodes scapularis]
Length = 759
Score = 313 bits (801), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 165/323 (51%), Positives = 213/323 (65%), Gaps = 10/323 (3%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAV 59
MNQQRSRRFRASK+ A+ E R+R E +G LPP K S+ FDSN ITPGT FMA
Sbjct: 109 MNQQRSRRFRASKETAEKVEEMSRIRTELRDKGIPLPPEKPKSEHFDSNCITPGTPFMAR 168
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
L+ L YY+H R+NNDPGW+ I+VILSDANVPGEGEHKIM ++R QR P +DPNT HCL
Sbjct: 169 LAKCLHYYVHDRMNNDPGWKNIEVILSDANVPGEGEHKIMDFIRRQRANPKHDPNTHHCL 228
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
G DADLIML LATHE +F+I+RE F P Q C LCGQ GH +C+G AK K GE +
Sbjct: 229 CGADADLIMLGLATHEPNFTIIRE-EFKPNQPRPCELCGQLGHEMKDCQGLAKEKTGELE 287
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
+ + + + FL + LREYL + + N PF ++E +DD++FMCFFVGNDFLP
Sbjct: 288 KP----IGCETEFIFLRLNVLREYLTRDLHMDNLPFTFNIERAIDDWVFMCFFVGNDFLP 343
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIREGAI+ L+ +YKK GGYLT+ +L RV+ + + + +A
Sbjct: 344 HLPSLEIREGAIDRLITLYKKAVYKTGGYLTENGFVALERVQLIMSGKCGFSLLLAVGQA 403
Query: 300 RLHQRHAER----IKREKAQARR 318
++A R ++RE + RR
Sbjct: 404 VGATQNARREAYDMRREGMEHRR 426
Score = 220 bits (560), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 124/302 (41%), Positives = 174/302 (57%), Gaps = 21/302 (6%)
Query: 420 NSDNPEE--DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYE 477
+S + EE D+V+L E GWKERYY KF+ + + R +V Y EGLCWV+ YYY+
Sbjct: 466 DSSDEEEPHDEVRLWEDGWKERYYVSKFDINS--DNVAFRHEVATAYVEGLCWVLRYYYQ 523
Query: 478 GVCSWQWFYPYHYAPFASDLKDLDQFNISFEL-GHPFKPFNQLLGVFPSASSHALPEHYR 536
G SW+WF+PYHYAPFASD ++ I+FE PFKP QL+ VFP+AS LP +
Sbjct: 524 GCASWKWFFPYHYAPFASDFINVGDIKINFERDTQPFKPMEQLMSVFPAASKQHLPPAFG 583
Query: 537 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 596
LM DP+SPI DFYP DF++D+NGK+Y+WQG+A LPF+DE RLL+ VK + TLTE+E +
Sbjct: 584 DLMDDPDSPIIDFYPIDFKIDLNGKKYAWQGVALLPFVDERRLLETVKTVYPTLTEDEVK 643
Query: 597 RNSIMADMLFVLLSHPLSASIYTLDEHCKQL-KIKERVEVKERLNPELSDGMNGYISPCA 655
RN D+ +V H + + L E CK ++ + R + E S +
Sbjct: 644 RNIRGDDVFYVRKGHRGYSYLLGLYEACKDFNRVSTLIPAHLRCSEEFL-----CFSIFS 698
Query: 656 GDPHPPVFRSPVASMEDIMGNQVLCAIYKLP----DAHKHVTRPPAGVIFPKKIVQLEDL 711
D H S + +++I N V+C ++ P D R P G P ++++ DL
Sbjct: 699 SDVH-----SVIRGLDNIPDNSVVCVRFRDPKYGNDYVFKAERLP-GAKDPDRVLKPGDL 752
Query: 712 KP 713
P
Sbjct: 753 TP 754
>gi|164658822|ref|XP_001730536.1| hypothetical protein MGL_2332 [Malassezia globosa CBS 7966]
gi|159104432|gb|EDP43322.1| hypothetical protein MGL_2332 [Malassezia globosa CBS 7966]
Length = 1133
Score = 312 bits (800), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 155/325 (47%), Positives = 216/325 (66%), Gaps = 14/325 (4%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR+++DA + E+ +E +R+G + + +DSN ITPGT FM +L
Sbjct: 88 MNQQRSRRFRSAQDAKILHQQREQELEERKRKGLAGENERIEKSWDSNAITPGTPFMDLL 147
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ +L+Y+I +LN DPGW+ + V+LSDA+VPGEGEHKIM Y+R +R+ P +DPN RH +Y
Sbjct: 148 ASSLRYWIAHKLNTDPGWKNLCVVLSDASVPGEGEHKIMDYIRRKRSDPNHDPNMRHVIY 207
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADLIML+LATHE HF +LRE VF+ + + C CGQ GH+AANC G+A+ +A F
Sbjct: 208 GLDADLIMLSLATHEPHFKVLREDVFSQDAKHRGCHRCGQEGHVAANCRGEARNEAKPFQ 267
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
KKP+ FL + TLREYL E R P F DLE +DD++F+ FFVGNDFLP
Sbjct: 268 ---------KKPFIFLDVPTLREYLQVELRTPGTSFPFDLERAIDDWVFLIFFVGNDFLP 318
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIREGAI+ L+ ++K+E + GY+T+ K L ++ + + ED IF+KR
Sbjct: 319 HLPSLEIREGAIDTLLRIWKRELPNMSGYVTNNGKVELANAQYILDGLAEVEDDIFRKRK 378
Query: 300 RLHQRHAERIKREKA----QARRGD 320
+R +R + +A+ GD
Sbjct: 379 ETEERQEANKRRHASSNHQEAQHGD 403
Score = 216 bits (551), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 112/264 (42%), Positives = 156/264 (59%), Gaps = 12/264 (4%)
Query: 426 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 485
ED VKL EPG++ERYY +KF + + + R+ VV Y EGLCWV+ YYY+G SW+WF
Sbjct: 652 EDTVKLWEPGYRERYYRQKFGVELSDTK--FRRSVVQAYVEGLCWVLAYYYQGCPSWKWF 709
Query: 486 YPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 545
YPYHYAPFA+D D+ +I F PF+PF QL+GV P+AS LP +++LMT+ S
Sbjct: 710 YPYHYAPFAADFTDVQDMHIDFGESEPFRPFEQLMGVLPAASKSNLPVPFQQLMTNEESE 769
Query: 546 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 605
I DFYP +F +DMNGK+ +WQG+A LPFIDE RLL + K LT++E RRNS ++L
Sbjct: 770 IIDFYPNEFSIDMNGKKMAWQGVALLPFIDENRLLHALHKRYAQLTDDEVRRNSFGRNVL 829
Query: 606 FVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRS 665
FV A ++ + + R +V ++ + G I+P F S
Sbjct: 830 FV----SEDADLFPVMSRLYTKRSDGRADV---IDTARHAQIAGTIAPDTSCVPGSTFYS 882
Query: 666 P---VASMEDIMGNQVLCAIYKLP 686
P V+ M+DI ++ + Y P
Sbjct: 883 PLPSVSGMQDIQNDRSIWTYYDFP 906
>gi|222615546|gb|EEE51678.1| hypothetical protein OsJ_33030 [Oryza sativa Japonica Group]
Length = 954
Score = 312 bits (799), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 158/279 (56%), Positives = 194/279 (69%), Gaps = 6/279 (2%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPK---SDSQVFDSNVITPGTEFM 57
MNQQR+RRF+++ A + EE LR F EG+K+ P+ S S+V D NVIT GTEFM
Sbjct: 109 MNQQRARRFKSAMAAKQAEVEENILRDRFRAEGKKVLPRETSSSSEVSDPNVITLGTEFM 168
Query: 58 AVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRH 117
LS AL+YYI RLN+DP W+ I VILSDANVPGEGEHKIMS++R QR GYDPNTRH
Sbjct: 169 DKLSDALKYYIRARLNSDPLWKDINVILSDANVPGEGEHKIMSFIRAQRGREGYDPNTRH 228
Query: 118 CLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAG- 176
CLYGLDADLIMLALA+HEVHFSILRE V Q+ P + K K +A
Sbjct: 229 CLYGLDADLIMLALASHEVHFSILREEVLHQNNQENTIPI-TPKTFTSQEAEKFKCRAWF 287
Query: 177 -EFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGN 235
E E + KKPYQFL+IW LREYL+ + +IPNP +D+E ++DDF+F+CF GN
Sbjct: 288 PRITEARPEGKLTKKPYQFLNIWVLREYLELDMKIPNPIQTLDVERMIDDFVFICFLTGN 347
Query: 236 DFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSK 274
DF+PH+P+LEI EGAI+LL+ VYK F +GGY+ D K
Sbjct: 348 DFIPHIPSLEIHEGAIDLLIEVYKTSFNKMGGYIVDTDK 386
Score = 193 bits (490), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 119/342 (34%), Positives = 175/342 (51%), Gaps = 48/342 (14%)
Query: 382 IGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYY 441
+ ++ + + S E D N E + LK++L +K D + + DK+KLG PGWK R++
Sbjct: 483 VKSSQTDGQVSDEQDITMNTLELRKNLKDILHNKQDLIKTGACKHDKIKLGSPGWKSRFF 542
Query: 442 EEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLD 501
+EKF+A+T +E + + ++V +Y EGLCWV+ YY+ V SW W+YP++YAPFASD++ L
Sbjct: 543 KEKFDAETKDEIAKLQNEMVQKYLEGLCWVLCYYFADVPSWSWYYPFYYAPFASDVRGLS 602
Query: 502 QFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGK 561
+ S ALP Y KLM S I FYP++ ++D +GK
Sbjct: 603 R-------------------------SFALPGCYSKLMDCDESAIQAFYPSELDIDTDGK 637
Query: 562 RYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLS---ASIY 618
RY WQGIAKLPFI++ LL K E L E RRN++ + +F+ S+ L+ A
Sbjct: 638 RYLWQGIAKLPFIEDKLLLSVTKTAEKDLAVHELRRNTVRQEKIFLRNSNALAKNEAFAQ 697
Query: 619 TLDEHCKQLKIKERV-EVKERLNPELSDGMNGYISPCAGDPHPPVFRSPVASMEDIMGNQ 677
T D ++L I E+ L+P+ D NG+ G P I +
Sbjct: 698 TSDCSLQKLPIDPATSEIGGWLSPDDDDFSNGF----CGSP--------------IENDL 739
Query: 678 VLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKPAPVLWH 719
+ A + P+A K TR V P K V D+ P LWH
Sbjct: 740 SISAKFFNPEAVKPATRLLQNVTVPYKTVTEADICARP-LWH 780
>gi|224587591|gb|ACN58687.1| 5-3 exoribonuclease 2 [Salmo salar]
Length = 713
Score = 311 bits (797), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 229/634 (36%), Positives = 316/634 (49%), Gaps = 66/634 (10%)
Query: 131 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 190
LATHE +F+I+RE F P Q C +CGQ GH +C+G A+ K GE DE D + ++
Sbjct: 1 LATHEPNFTIIREE-FKPNQPRPCAMCGQKGHELKDCQGVAREKQGEHDEFADAMPASEQ 59
Query: 191 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 250
+ F+ + LREYL+ E + + PF D E VDD++FMCFFVGNDFLPH+P+LEIREGA
Sbjct: 60 EFIFIRLCVLREYLERELTMASLPFPFDFERTVDDWVFMCFFVGNDFLPHLPSLEIREGA 119
Query: 251 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 310
I+ L+ +YK GGY+T+ L VE +QA+G ED IF+KR + E K
Sbjct: 120 IDRLVGIYKDVVHKTGGYITENGFVKLESVELIMQAIGVAEDNIFKKR----KEDDEGFK 175
Query: 311 REKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRP 370
R + ++ + Q S + +F L P Q + +G
Sbjct: 176 RRNKEKKKRMKAQ--QQGPSFLTSGQFAPQALGGRGRPEVVQNARHQAFDMRMQGRD--Q 231
Query: 371 HKVPRLSSGATIGAAIVEAENS-FETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKV 429
H S G +AE+S E DP++N ++ K+ R F+ D ++D
Sbjct: 232 HNRAGTSDGQDGRGVKRKAEDSDSEPDPEDNVRLWEDGWKQ--RYYKTKFDVDATDDD-- 287
Query: 430 KLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYH 489
F K E V+ Y +G C +Y +P+H
Sbjct: 288 ---------------FRKKVVMSYVEGLCWVLRYYYQG-CASWKWY----------FPFH 321
Query: 490 YAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISD 548
YAPFASD KD+ FELG PFKP QL+GVFP+AS + LPE +R LM++P S I D
Sbjct: 322 YAPFASDFKDIKGMFTDFELGTKPFKPLEQLMGVFPAASGNFLPETWRSLMSNPESSIID 381
Query: 549 FYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVL 608
FYP DF +D+NGK+Y+WQG+A LPF+DE RL + ++ L+ EE +RNS+ +DMLFV
Sbjct: 382 FYPDDFAIDLNGKKYAWQGVALLPFVDERRLRAALAEVYPNLSPEENKRNSLGSDMLFVG 441
Query: 609 LSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPP--VFRSP 666
SH + I ++L E E E + EL G+ G ++ GDP P SP
Sbjct: 442 KSHSICDFI-------QELYRGESHEGTE-MPAELCHGIQGTLN-LDGDPILPDKPVESP 492
Query: 667 VASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLK-PAPVLWHEDSGRR 725
+ + DI N + YK P G F K V L K PA VL D R
Sbjct: 493 IPMLRDIAQNSAIGVKYK---------DPQFGETFVFKAVILHGAKIPAKVLKPGDWERG 543
Query: 726 PHENGRHNPH-GTISGRQ---LGEAAHRLVANSL 755
G P G S RQ L ++A R + +S+
Sbjct: 544 NRGRGNWRPQLGFNSNRQQVHLDQSAFRALGHSV 577
>gi|443927373|gb|ELU45871.1| 5'-3' exoribonculease Dhp1 [Rhizoctonia solani AG-1 IA]
Length = 1086
Score = 309 bits (792), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 151/298 (50%), Positives = 205/298 (68%), Gaps = 7/298 (2%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+++A + E + + FE G + ++ + +DSN ITPGT FM +L
Sbjct: 109 MNQQRSRRFRAAQEAKEKEEERKEAIKMFEALGHSVSEETTKKAWDSNAITPGTPFMDLL 168
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ +L+Y++ + N+DPGW+ ++VI+SDA+VPGEGEHKIM ++R QR PG+DPNTRH +Y
Sbjct: 169 AQSLRYWVVQKQNSDPGWKNLQVIISDASVPGEGEHKIMDFIRRQRVNPGHDPNTRHVIY 228
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIMLALATHE HF +LRE VF ++ C +CGQ GH AA C GK K E
Sbjct: 229 GLDADLIMLALATHEPHFRVLREDVFADSNKNSCRICGQEGHFAAQCTGKPK-------E 281
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
K KKP+ FL + LREYL E +PN PF DLE +DD++F+ FFVGNDFLPH
Sbjct: 282 KDTSKPPEKKPFIFLDVAVLREYLAIELNVPNIPFAFDLERAIDDWVFLIFFVGNDFLPH 341
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 298
+P+LEIREGAI+ L+ ++K E +GGYL + + + V+ ++ + ED IF+KR
Sbjct: 342 LPSLEIREGAIDTLLKIWKDELPRMGGYLAEHGQANKANVQIMLEGLAKREDEIFRKR 399
Score = 233 bits (594), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 134/324 (41%), Positives = 188/324 (58%), Gaps = 26/324 (8%)
Query: 382 IGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYY 441
I ++ E E P E++E +K+ L+ D +ED +KL EPG+KERYY
Sbjct: 609 IKRSVEEIEKDETDTPAEDEE---PTVKKALKVNPDGTVE---QEDTIKLWEPGYKERYY 662
Query: 442 EEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLD 501
KF A+ + E RK + Y EGLCWV+ YYY+G SW WFYPYH+APFA+D +D++
Sbjct: 663 RSKFGAELNDT--ELRKQITTSYMEGLCWVLQYYYQGAPSWTWFYPYHFAPFAADFEDVE 720
Query: 502 QFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGK 561
+I F LG PFKP+ QL+GVFP+AS +P ++ LMTD +SPI DFYPT+FE+DMNGK
Sbjct: 721 HMDIKFNLGQPFKPYEQLMGVFPAASRVHIPTPFQSLMTDEDSPIIDFYPTEFEIDMNGK 780
Query: 562 RYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLD 621
+ SWQG+A LPFIDE RLL + + L+++E RRN ++ ++V + L D
Sbjct: 781 KMSWQGVALLPFIDEKRLLGAMAERYPELSDDEVRRNKWGSNHIYVSDGNDL------YD 834
Query: 622 EHCKQLKIKERVEVKERLNPELSDGMNGYI---SPCAGDPHPPVFRSPV--ASMEDIMGN 676
C L K+R E L+ LS G++G + C D P SP+ + DI+ N
Sbjct: 835 FFCG-LYTKQRSEKPIPLDTRLSRGISGTVLHDPACVPDSSYP---SPLTRVGLPDIVAN 890
Query: 677 QVLCAIYKLP---DAHKHVTRPPA 697
+ L A + P H+ + P A
Sbjct: 891 RTLSAQFYYPRQITPHRSILLPGA 914
>gi|195388580|ref|XP_002052957.1| GJ23613 [Drosophila virilis]
gi|194151043|gb|EDW66477.1| GJ23613 [Drosophila virilis]
Length = 774
Score = 307 bits (787), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 160/319 (50%), Positives = 208/319 (65%), Gaps = 3/319 (0%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAV 59
MNQQRSRRFRA+K+ + E ER+R E G KLPP K + FDSN ITPGT FM
Sbjct: 112 MNQQRSRRFRAAKETIEKRLEIERIRNELLTRGCKLPPEKEKGEHFDSNCITPGTPFMDR 171
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
LS L YYIH RLNN+P W+ I+VILSDANVPGEGEHKIM Y+R QR P ++PNT H L
Sbjct: 172 LSKCLHYYIHDRLNNNPAWKGIQVILSDANVPGEGEHKIMDYIRKQRAQPDHNPNTHHVL 231
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
G DADLIML LATHE +F+I+RE F P + C +C Q GH C G +
Sbjct: 232 CGADADLIMLGLATHEPNFTIIRE-EFLPNKPRPCDICNQFGHEMDKCVGLGAAGTSNNN 290
Query: 180 EKGDEVVV-PKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFL 238
+V + + + F+ + LREYL ++PN PF D E ++DD++FMCFFVGNDFL
Sbjct: 291 HFSPDVPIGAEVKFIFVRLSVLREYLKKTLQMPNLPFTYDFERVLDDWVFMCFFVGNDFL 350
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 298
PH+P+LEIREGAI+ L+ +YKK GYLTD + +L RV+ + +G+ ED+IF+ R
Sbjct: 351 PHLPSLEIREGAIDRLVELYKKCVYKTKGYLTDSGEVNLDRVQLIMTDLGNVEDQIFKDR 410
Query: 299 ARLHQRHAERIKREKAQAR 317
R Q++ R +R+ ++
Sbjct: 411 QRREQQYKARQQRDNNNSK 429
Score = 212 bits (540), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 118/298 (39%), Positives = 178/298 (59%), Gaps = 24/298 (8%)
Query: 429 VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPY 488
V+L E G+K RYYE KF+ P + + R V L+Y GLCWV+ YYY+G SW W++PY
Sbjct: 488 VRLWEEGFKNRYYESKFDV--PPDNLQFRYAVALQYVRGLCWVLKYYYQGCASWNWYFPY 545
Query: 489 HYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPIS 547
HYAPFASD ++ + FE G PF P QL+GVFP+ASS +PE + +LM+ P+S I
Sbjct: 546 HYAPFASDFVNIQGLSTIFEKGTKPFNPLEQLMGVFPAASSSHVPEPWAQLMSRPDSTII 605
Query: 548 DFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
DFYP DF++D+NGK+++WQG+A LPF+DE RL + + LT+EE +RN + L+V
Sbjct: 606 DFYPDDFKIDLNGKKFAWQGVALLPFVDENRLFKALIPLHSHLTDEEVKRNKRGENNLYV 665
Query: 608 LLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELS-DGMNGYISPCAGDPHPPV---F 663
P H K ++ + K +L+ +S +GM G IS D + +
Sbjct: 666 SKFSP----------HFKTVQKLYQPAYKSQLDCPISFNGMCGTIS--ISDLNTALNDQL 713
Query: 664 RSPVASMEDIMGNQVLCAIYKLPDAHKHVT----RPPAGVIFPKKIVQLEDLKPAPVL 717
+SP+ + DI+ N+V+ A++K P ++ T R P V P +++Q ++ K P++
Sbjct: 714 KSPIPGLPDIIKNEVVTAVFKDPKYDENFTFLAKRLPNAVD-PPQVIQSDNNKNGPII 770
>gi|403416696|emb|CCM03396.1| predicted protein [Fibroporia radiculosa]
Length = 1140
Score = 307 bits (787), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 153/317 (48%), Positives = 213/317 (67%), Gaps = 10/317 (3%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPK-SDSQVFDSNVITPGTEFMAV 59
MNQQRSRRFR+S++A D + +E G+ L + + + +DSN ITPGT FM +
Sbjct: 123 MNQQRSRRFRSSQEAKDKEEAHKEAIAMWEAMGKTLSEEEKNKKSWDSNAITPGTPFMDL 182
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
L+ +L+Y++ ++N DPGW +++VI+SDANVPGEGEHKIM ++R QR+ PG+DPNTRH +
Sbjct: 183 LASSLRYWVAHKMNTDPGWSQLQVIISDANVPGEGEHKIMEFIRRQRSNPGHDPNTRHVI 242
Query: 120 YGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEF 178
YGLDADLIML+LATHE +F +LRE V F G + C +CGQ GH AA C G + E
Sbjct: 243 YGLDADLIMLSLATHEPYFRVLREDVFFQEGSRTACRICGQEGHYAAQCTG----QKAEI 298
Query: 179 DEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFL 238
+ E KKPY FL + LREYL+ E +P+ PF +LE +DD++F+ FFVGNDFL
Sbjct: 299 SKPPPE----KKPYVFLDVAILREYLEAELNLPHAPFPFNLEQAIDDWVFLIFFVGNDFL 354
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 298
PH+P+LEIREGAI+ L+ ++++E +GGYLT+ + L R ++ + ED IF++R
Sbjct: 355 PHLPSLEIREGAIDTLLRIWREELPRMGGYLTNHGQVELSRAHIILEGLAQREDDIFRRR 414
Query: 299 ARLHQRHAERIKREKAQ 315
+R KR K Q
Sbjct: 415 REAEERQDHEAKRRKIQ 431
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 125/291 (42%), Positives = 175/291 (60%), Gaps = 16/291 (5%)
Query: 425 EEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQW 484
+ED VKL EPG++ERYY +KF + + E RK V Y EG+ WV+ YYY+G SWQW
Sbjct: 669 QEDFVKLWEPGYQERYYRQKFGVEYGDV--EFRKKVAKHYIEGMAWVLQYYYQGTPSWQW 726
Query: 485 FYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNS 544
+YPYH+APFASD K +I F+ G PFKPF QL+ VFP+AS H +P+ + +LMT+ +S
Sbjct: 727 YYPYHFAPFASDFKTAQNMSIKFDPGQPFKPFEQLMSVFPAASRHLIPKVFHELMTEESS 786
Query: 545 PISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADM 604
PI DFYP+ F++DMNGK+ +WQG+A LPFIDE RLLD + LT+EE RRN ++
Sbjct: 787 PIIDFYPSTFQIDMNGKKMAWQGVALLPFIDERRLLDAMTPRYSNLTDEEKRRNKWGNNV 846
Query: 605 LFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFR 664
L+V H L S+ + L K + + ++P+ S G+NG + P +
Sbjct: 847 LYVFEEHSLYPSL-------EALYGKRKTDEPMPVDPKASKGINGSLLPNPDCIPGSTYY 899
Query: 665 SPV--ASMEDIMGNQVLCAIYKLP---DAHKHVTRPPAGVIFPKKIVQLED 710
SP+ ++ DI ++ L A Y P H+ V P GV PK ++ D
Sbjct: 900 SPLNGQNLADIRNDRSLSAWYLPPKQLTPHRSVLLP--GVRRPKPVLSQND 948
>gi|20129299|ref|NP_609082.1| Rat1, isoform A [Drosophila melanogaster]
gi|442626452|ref|NP_001260166.1| Rat1, isoform B [Drosophila melanogaster]
gi|74869864|sp|Q9VM71.2|XRN2_DROME RecName: Full=5'-3' exoribonuclease 2 homolog; AltName:
Full=Ribonucleic acid-trafficking protein 1; Short=dRAT1
gi|10728625|gb|AAF52452.2| Rat1, isoform A [Drosophila melanogaster]
gi|219990665|gb|ACL68706.1| FI04660p [Drosophila melanogaster]
gi|440213467|gb|AGB92702.1| Rat1, isoform B [Drosophila melanogaster]
Length = 908
Score = 306 bits (783), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 160/321 (49%), Positives = 203/321 (63%), Gaps = 2/321 (0%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAV 59
MNQQRSRRFRA+K+ + E R+R+E G KLPP K + FDSN ITPGT FM
Sbjct: 112 MNQQRSRRFRAAKETTEKRLEIARIREELLSRGCKLPPEKEKGEHFDSNCITPGTPFMDR 171
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
LS L Y++H R NN+P W+ IKVILSDANVPGEGEHKIM Y+R QR P +DPNT+H L
Sbjct: 172 LSKCLHYFVHDRQNNNPAWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHVL 231
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
G DADLIML LATHE +F+I+RE F P + C +C GH C G +
Sbjct: 232 CGADADLIMLGLATHEPNFTIIRE-EFLPNKPRPCDICNGFGHEMDKCVGLGATAPTSAN 290
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
K D + + + F+ + LREYL +PN PFE E +DD++FMCFFVGNDFLP
Sbjct: 291 FKPDVPIGAEVKFIFVRLSVLREYLKQTLEMPNLPFEYSFERALDDWVFMCFFVGNDFLP 350
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIREGA++ L+ +YKK GYLTD +L RV+ + +G+ ED+IF+ R
Sbjct: 351 HLPSLEIREGAVDRLVELYKKCVYKTRGYLTDSGDVNLDRVQLIMTDLGNAEDQIFKSRQ 410
Query: 300 RLHQRHAERIKREKAQARRGD 320
R ++ R K K Q R D
Sbjct: 411 RREEQFKARDKARKRQERNQD 431
Score = 207 bits (526), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 125/334 (37%), Positives = 188/334 (56%), Gaps = 30/334 (8%)
Query: 429 VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPY 488
V+L E G+K+RYYE KF+ + + R V L+Y GLCWV+ YYY+G SW W++PY
Sbjct: 488 VRLWEDGFKDRYYESKFDVAPGNQ--QFRYAVALQYVRGLCWVLKYYYQGCASWNWYFPY 545
Query: 489 HYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPIS 547
HYAPFASD ++ + FE G PF P QL+GVFP+ASS +PE + KLM+DP SPI
Sbjct: 546 HYAPFASDFVNIQGLSTMFEKGTKPFNPLEQLMGVFPAASSSHVPEPWAKLMSDPESPII 605
Query: 548 DFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
DFYP DF++D+NGK+++WQG+A LPF+DE RL + LT EE +RN + L++
Sbjct: 606 DFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALVPYYDQLTGEEVKRNKRGDNYLYI 665
Query: 608 LLSHPLSASIYTLDEHCKQL-KIKERVEVKERLNPELS-DGMNGYISPCAGDPHPP-VFR 664
P H K++ KI E+ + E + +S DGM G + + V +
Sbjct: 666 SNQSP----------HYKKVKKISEKDD--ESVCKAISFDGMRGTLGKTELNTAISGVLK 713
Query: 665 SPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLED-LKPAPVLWHEDSG 723
SP++ + DI N + ++ P+ + IF K +LE+ + P VL +E SG
Sbjct: 714 SPISGLSDINDNITVTTTFRDPEYDED-------YIFEAK--RLENAVDPPQVLPNEQSG 764
Query: 724 RRPHENGRHNPHGTISGRQLGEAAHRLVANSLQH 757
+ N H T + + ++ HR++ +++
Sbjct: 765 NKHRPVIGFNSHLTRA--YVPDSGHRMLNAGIRN 796
>gi|50312097|ref|XP_456080.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49645216|emb|CAG98788.1| KLLA0F22385p [Kluyveromyces lactis]
Length = 1453
Score = 306 bits (783), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 213/640 (33%), Positives = 321/640 (50%), Gaps = 84/640 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA E+ Q+ G +LP + FDSN ITPGTEFMA L
Sbjct: 94 MNQQRARRFRTAMDA-------EKALQKAIENGDELPK---GEPFDSNAITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+IH ++ ND W+ +KVI S VPGEGEHKIM Y+R R Y+PNTRHC+Y
Sbjct: 144 TENLKYFIHDKITNDTRWQNVKVIFSGHEVPGEGEHKIMDYIRAIRAQEDYNPNTRHCIY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLI+L L+TH+ HF +LRE V F +
Sbjct: 204 GLDADLIILGLSTHDHHFCLLREEV-------------------------------TFGK 232
Query: 181 KGDEV-VVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDF 237
+ V + + + LH+ LREYL EF + FE D E ++DDFIF+ F +GNDF
Sbjct: 233 RSSSVKTLETQNFFLLHLSILREYLALEFEEITDSVQFEYDFERVLDDFIFVLFTIGNDF 292
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
LP++P L +++GA +L+ +K+ + + GY+ + K +L R +++ + +E F+K
Sbjct: 293 LPNLPDLHLKKGAFPVLLQTFKEALQHMDGYINEQGKINLARFSIWLKYLSDFEYLNFEK 352
Query: 298 R---ARLHQRHAERIKR--EKAQARRGDDVEPL--------AQPDSLVPVSRFHGSRLAS 344
+ + E I E+ + R G + +P L V R S L
Sbjct: 353 KDIDVEWFNQQLENISLEGERKRTRMGKKLLMKQQKKLIGAVKPWLLKTVQRKVTSELQD 412
Query: 345 GP-SPSPYQQSECV-GRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKE 402
P + E V LD K + + S + ++ ++ + QE E
Sbjct: 413 ADFEIFPLEDKELVRANLDFLKEFAFDLGLILAHSKSKDLYYFKLDLDS---INVQETDE 469
Query: 403 EFKAKLKELLRD-KSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVV 461
E +A++ E R K E++++ + ER+ E K ++ + + D
Sbjct: 470 EHEARIHETRRSIKKYEQGIIIASEEELEEEREIYSERFVEWK------DQYYKDKLDFS 523
Query: 462 LRYTEGLCWVMHYYYEGVCSWQWFY------------PYHYAPFASD-LKDLDQFNISFE 508
+ T+ L + Y G+ W +Y YHYAP SD +K +DQ NI F
Sbjct: 524 INDTDSLKEMTENYVGGL-QWVLYYYYRGCPSWSWYYRYHYAPRISDVIKGIDQ-NIEFH 581
Query: 509 LGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGI 568
G PFKPF QL+ V P S + +P YR LM D +SPI DFYP + E+D+NGK W+ +
Sbjct: 582 KGQPFKPFQQLMAVLPERSKNLIPVVYRPLMYDEHSPILDFYPNEVELDLNGKTADWEAV 641
Query: 569 AKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVL 608
K+ F+D+ RL++ + + L+ +E +RNS D++F+
Sbjct: 642 VKISFVDQKRLVEAMAPYDAKLSPDEKKRNSFGTDLIFIF 681
>gi|325185573|emb|CCA20056.1| 5'3' exoribonuclease 1 putative [Albugo laibachii Nc14]
Length = 1515
Score = 305 bits (781), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 214/639 (33%), Positives = 313/639 (48%), Gaps = 121/639 (18%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
+NQQRSRRF A + E L E E+ G + +FDS+ ITPGTEF+ +
Sbjct: 97 LNQQRSRRFSAGLVRQEKVKE---LALEMEKNGTT----CEKDLFDSSCITPGTEFLERI 149
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S L Y+I ++ NDP W +++V S + VPGEGEHKIM ++R ++ YD N RHC+Y
Sbjct: 150 SEQLVYFIRHKIKNDPLWSRLEVYFSGSEVPGEGEHKIMDFIRQRKMSARYDANVRHCMY 209
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEG-KAKRKAGEFD 179
G DADL++L+L HE HF+++RE H+ G K+K K +
Sbjct: 210 GSDADLMLLSLMAHEPHFTLIRE------------------HVDWGSGGFKSKGKLSGSE 251
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNP-------PFEIDLECIVDDFIFMCFF 232
+K + + +Q +H+ REYL E R+ P +D E ++DDFIF+ F
Sbjct: 252 KKK----IQEDQWQLVHLSLFREYLMMEMRVKYPLGGQVQIDERLDGERMIDDFIFLTFL 307
Query: 233 VGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGG--YLTDGSK-PSLRRVEHFIQAVGS 289
GNDF+PH PTLEIRE AI +L+ VY++ YLTD K ++ ++ +GS
Sbjct: 308 FGNDFIPHSPTLEIRENAIPILLKVYRELLDEQKSVQYLTDSGKLVNVELLQALFLKIGS 367
Query: 290 YEDRIFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPS 349
E+ I KRA + ER KR + R D P A PD +
Sbjct: 368 MEEEILSKRAEV-----ERKKRNRKHYR--SDKRP-AIPDEI------------------ 401
Query: 350 PYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQ-ENKEEFKAKL 408
++C+ +L P + AA +E + + + + ++++E++ +
Sbjct: 402 ---DTKCMPQL-------------PVVDELDEDEAAEIEFALALDQEAEFDSQDEYEDDV 445
Query: 409 KELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPE------EREETRKDVVL 462
ELL D K YYE KF + + + +E RK
Sbjct: 446 SELLTLSGTESFQDT-------------KWTYYERKFGLQRGDGDAGNSDLQEIRK---- 488
Query: 463 RYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQF--NISF----ELGH---PF 513
+ E L W + YY++G SW W+YP+HY+P SDL + I+F E G P
Sbjct: 489 HFLEALVWCLAYYFQGPPSWSWYYPHHYSPMISDLTGIADILKEITFPSVSETGAVDGPL 548
Query: 514 KPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPF 573
PF QLL PS+S+H LP+ ++ LM P SPI FYP F+VDM GKR W+G+ LPF
Sbjct: 549 LPFEQLLANLPSSSAHLLPKPFQFLMQSPLSPIKHFYPATFQVDMEGKRNDWEGVTVLPF 608
Query: 574 IDEARLLDEVKKIEHT----LTEEEARRNSIMADMLFVL 608
ID +L + +EH LTE E +RN + L ++
Sbjct: 609 IDIEQLRAAI--LEHCPMDQLTEAECKRNRLQLHALKIV 645
>gi|238593916|ref|XP_002393329.1| hypothetical protein MPER_06950 [Moniliophthora perniciosa FA553]
gi|215460659|gb|EEB94259.1| hypothetical protein MPER_06950 [Moniliophthora perniciosa FA553]
Length = 332
Score = 305 bits (781), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 147/301 (48%), Positives = 207/301 (68%), Gaps = 9/301 (2%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLR--QEFEREGRKLPP-KSDSQVFDSNVITPGTEFM 57
MNQQRSRRFRA+++A + EE RL + +E G+ + + + + +DSN ITPGT FM
Sbjct: 21 MNQQRSRRFRAAQEAKEK--EEARLESVRLWEEMGKTISEDEKNKKAWDSNAITPGTPFM 78
Query: 58 AVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRH 117
+L+ +L+Y++ ++N+DPGW+ ++VI+SDA+VPGEGEHKIM Y+R QR PG+DPNTRH
Sbjct: 79 TLLAASLRYWVVQKMNSDPGWKNLQVIISDASVPGEGEHKIMDYIRRQRTNPGHDPNTRH 138
Query: 118 CLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGE 177
+YGLDADLIMLALATHE +F +LRE VF+ C +CGQ GH AA C E
Sbjct: 139 VIYGLDADLIMLALATHEPYFRVLREDVFSDSSNMACRMCGQEGHYAAQCTA----TPAE 194
Query: 178 FDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDF 237
E+ + V +KP+ FL + LREYL+ E +P PF +LE +DD++ + FFVGN F
Sbjct: 195 VQERAKKKVTERKPFIFLDVSILREYLEAELNVPQTPFPFNLEQAIDDWVLLIFFVGNAF 254
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
LPH+P+LEIREGAI+ L+ ++K E +GGYLT+ + L R + ++ + ED IF++
Sbjct: 255 LPHLPSLEIREGAIDTLLRIWKMELPRMGGYLTNHGRLELARAQIILEGLAKREDDIFKR 314
Query: 298 R 298
R
Sbjct: 315 R 315
>gi|209877046|ref|XP_002139965.1| 5'-3' exoribonuclease [Cryptosporidium muris RN66]
gi|209555571|gb|EEA05616.1| 5'-3' exoribonuclease, putative [Cryptosporidium muris RN66]
Length = 1148
Score = 305 bits (780), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 207/697 (29%), Positives = 314/697 (45%), Gaps = 140/697 (20%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRR++ S + + +QEFE+ G K PP + +DSN+ITPGT FM L
Sbjct: 108 MNQQRSRRYKTSMEIENLMQAYSEAKQEFEKLGYKCPPYKEK--WDSNLITPGTPFMERL 165
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S LQ YI + ++P W+ + VI SDAN+PGEGEHKI+ ++R QR YDPNTRH LY
Sbjct: 166 SACLQVYIRQKYESEPAWKTLSVIFSDANIPGEGEHKILDFIRKQRCNSNYDPNTRHVLY 225
Query: 121 GLDADLIMLALATHEVHFSILREVVFT-PGQQDKCFLCGQ---PGHLAANCEGKAKRKAG 176
G DADLIML L+THE +F I+RE + G C L + + + + + G
Sbjct: 226 GADADLIMLGLSTHEQNFFIVRESITNDDGASQICHLYNKLLTENSIDKSVNANNRIRFG 285
Query: 177 EFDEKGDEVVVPKKPYQFLHIWTLREYLDYEF---------------------------- 208
+ + K + + + LREYL YEF
Sbjct: 286 PNNSSNLRIYSWWKDLEMIDLSVLREYLAYEFKELEEKLSINREKYIENSNNPECTISTE 345
Query: 209 ---------------RIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINL 253
++ N F DLE +DDF+F+CFFVGNDFLP++P I +G+++
Sbjct: 346 IHEQDNNMKYSKINEKLYNSKFYYDLERCIDDFVFLCFFVGNDFLPNLPAFGIHKGSLDQ 405
Query: 254 LMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIKREK 313
L+A+Y K LG Y+T +++ + F + E + ++ R + R+ K +K
Sbjct: 406 LLAIYIKVLPTLGDYITWEGNINVKSIGLFFFYLKDLELDVLKEDTRFNNRNNISNKDQK 465
Query: 314 AQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKV 373
+ ++P V +F+G ++ V R+ K + +
Sbjct: 466 ---------DIFSKPKIDVNKVKFNGIDAYF---------NDHVNRILQFKDNNCETYMT 507
Query: 374 PRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGE 433
++ G G + + K KL L+ + D N D E+ + +
Sbjct: 508 DKVRLGD--GDVDIWRLRYY---------SIKFKLDLLVLNLKD-INQDETIENNLDID- 554
Query: 434 PGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPF 493
+E + ++ E ++V Y GL WV+ YYY GV SW WFYPYHYAP
Sbjct: 555 --------KETIDNNLYQKLSEFSREVGYHYIRGLSWVLKYYYHGVPSWDWFYPYHYAPL 606
Query: 494 ASDLKDL-------------------------------------------DQFNIS---- 506
DL ++ + FN S
Sbjct: 607 VVDLANMAASDLRKIGIKDVSIPDTIIKSVNICDGDSNNICNENELSVNSNTFNFSIENA 666
Query: 507 ----FELGHPFKPFNQLLGVF-PSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGK 561
F G PF P+ QL+ V P++ LP ++M+D SP+ +FYP F+ D NG
Sbjct: 667 ILAPFSQGVPFSPYQQLMAVLPPNSGKKCLPFKLYQMMSDEKSPLKEFYPDKFKEDPNGN 726
Query: 562 RYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
+ W+ I LPFI++ +LL+ VK +E +++ + RN
Sbjct: 727 KQRWKWIVLLPFINQEKLLEHVKPLEVHISDIDKIRN 763
>gi|299747213|ref|XP_001836883.2| 5'-3' exoribonuclease 2 [Coprinopsis cinerea okayama7#130]
gi|298407417|gb|EAU84500.2| 5'-3' exoribonuclease 2 [Coprinopsis cinerea okayama7#130]
Length = 1156
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 153/328 (46%), Positives = 213/328 (64%), Gaps = 8/328 (2%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDS-QVFDSNVITPGTEFMAV 59
MNQQRSRRFR++++A + + +E G+K+ + + Q +DSN ITPGT FM +
Sbjct: 122 MNQQRSRRFRSAQEAKEKEEARKEALALWEAMGKKVSDEEKTKQAWDSNAITPGTPFMDL 181
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
L+ +L+Y++ ++N DPGW+ I+VI+SDA+V GEGEHKIM Y+R QR+ PGYDPNT+H +
Sbjct: 182 LAASLRYWVVQKMNTDPGWKNIQVIISDASVAGEGEHKIMDYIRRQRSNPGYDPNTKHVI 241
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
YGLDADLIMLALATHE HF +LRE VF + C +CGQ GH AA C G +
Sbjct: 242 YGLDADLIMLALATHEPHFRVLREDVFAQDKSTACRICGQEGHYAAQCTGTKAEIEKKPP 301
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
+ + FL + LREYL+ E +P+ PF DLE +DD++ + FFVGNDFLP
Sbjct: 302 PPEKKPFI------FLDVAVLREYLEVELDVPSSPFRFDLEKAIDDWVLLIFFVGNDFLP 355
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIREGAI+ L+ ++K+E +GGYL+D +L R + ++ + ED IF++R
Sbjct: 356 HLPSLEIREGAIDTLLKIWKQELPRMGGYLSDNGTLNLARAQIILEGLAKREDEIFRRRR 415
Query: 300 RLHQRHAERIKREKA-QARRGDDVEPLA 326
+R A+ KR K QA R P A
Sbjct: 416 EAEERQAQNAKRRKLEQAHRQGGTGPAA 443
Score = 227 bits (578), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 122/293 (41%), Positives = 175/293 (59%), Gaps = 14/293 (4%)
Query: 425 EEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQW 484
+ED VKL EPG+KERYY++KF + P + E R V Y +GL WV+ YYY+G SWQW
Sbjct: 639 QEDTVKLWEPGYKERYYKQKFGVE-PHDIE-FRHKVAEAYVQGLAWVLQYYYQGTPSWQW 696
Query: 485 FYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNS 544
+YPYH+APFA+D D+++ +I F LG PFKP+ QL+GVFP+AS +P ++K M D +S
Sbjct: 697 YYPYHFAPFAADFVDVEKMDIKFNLGQPFKPYEQLMGVFPAASRKHIPAVFQKFMVDEDS 756
Query: 545 PISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADM 604
PI DFYP FE+DMNGK+ +WQG+A LPFIDE RLLD + LTE+E +RN ++
Sbjct: 757 PIIDFYPPTFEIDMNGKKMAWQGVALLPFIDETRLLDAMALEYPNLTEDEVKRNQPGHNV 816
Query: 605 LFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFR 664
LF HP +Y E K+K+ + ++ LS G++G + P +
Sbjct: 817 LFAADEHP----VYPFYEALYGKKMKKNAD-PVAIDTALSKGISGQVLPNPDCLPGSTYY 871
Query: 665 SPVAS--MEDIMGNQVLCAIYKLP---DAHKHVTRPPAGVIFPKKIVQLEDLK 712
P+ + + DI ++ L +Y P HK P G P +++ +DL+
Sbjct: 872 CPLTTVGLPDIRNDRSLSVLYFFPPQRTPHKSAMLP--GARKPPRVLSAQDLE 922
>gi|60677951|gb|AAX33482.1| RE02462p [Drosophila melanogaster]
Length = 519
Score = 304 bits (778), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 160/321 (49%), Positives = 203/321 (63%), Gaps = 2/321 (0%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAV 59
MNQQRSRRFRA+K+ + E R+R+E G KLPP K + FDSN ITPGT FM
Sbjct: 112 MNQQRSRRFRAAKETTEKRLEIARIREELLSRGCKLPPEKEKGEHFDSNCITPGTPFMDR 171
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
LS L Y++H R NN+P W+ IKVILSDANVPGEGEHKIM Y+R QR P +DPNT+H L
Sbjct: 172 LSKCLHYFVHDRQNNNPAWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHVL 231
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
G DADLIML LATHE +F+I+RE F P + C +C GH C G +
Sbjct: 232 CGADADLIMLGLATHEPNFTIIRE-EFLPNKPRPCDICNGFGHEMDKCVGLGATAPTSAN 290
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
K D + + + F+ + LREYL +PN PFE E +DD++FMCFFVGNDFLP
Sbjct: 291 FKPDVPIGAEVKFIFVRLSVLREYLKQTLEMPNLPFEYSFERALDDWVFMCFFVGNDFLP 350
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIREGA++ L+ +YKK GYLTD +L RV+ + +G+ ED+IF+ R
Sbjct: 351 HLPSLEIREGAVDRLVELYKKCVYKTRGYLTDSGDVNLDRVQLIMTDLGNAEDQIFKSRQ 410
Query: 300 RLHQRHAERIKREKAQARRGD 320
R ++ R K K Q R D
Sbjct: 411 RREEQFKARDKARKRQERNQD 431
>gi|358392275|gb|EHK41679.1| hypothetical protein TRIATDRAFT_228664 [Trichoderma atroviride IMI
206040]
Length = 1391
Score = 304 bits (778), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 212/632 (33%), Positives = 308/632 (48%), Gaps = 103/632 (16%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + D E+ R + REG +LP + + FDSN ITPGTEFMA L
Sbjct: 101 MNQQRARRFRTALDV-------EKARDKAIREGVELPKE---EPFDSNCITPGTEFMAKL 150
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S L+Y+++ +++ D W+ V+LS VPGEGEHKIM Y+R + P YDPN RHCLY
Sbjct: 151 SQQLRYFVNKKISEDTDWQGCDVVLSGHEVPGEGEHKIMEYIRNAKAQPNYDPNVRHCLY 210
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+ +K K+ E +
Sbjct: 211 GLDADLIMLGLLSHDPHFCLLREEV-TFGR-------------------ASKTKSKELEH 250
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFR-IPNP---PFEIDLECIVDDFIFMCFFVGND 236
+ + LH+ +REYL+ EF+ + N F+ DLE ++DDFI M FFVGND
Sbjct: 251 QN---------FYLLHLCIVREYLEMEFQELQNKGALKFQFDLERVIDDFILMAFFVGND 301
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP++P L I EGA+ + +YK GY+ + L R++ + + E F+
Sbjct: 302 FLPNLPGLHINEGALANMFRIYKSVLPQCEGYINENGVIHLDRLQRLLDELSKTELDNFE 361
Query: 297 KRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSEC 356
Q A + K + + G +P ++ ++ + ++ F R P+ +
Sbjct: 362 YEVSDQQWFASKQMENKLEQKNG--AKPRSKKNNQLIMTSFQ--RDLWKQKIRPFISNRS 417
Query: 357 VGRLDNGKGTSGRPHKVPR-LSSGATIGAAIVEAEN-------SF----ETDPQENKEEF 404
LD G K + L+ + + E E +F ET E+ +E
Sbjct: 418 QQPLDLGSDLKAADRKFAQDLAESMHLQWSTKEDEEGNRRLVIAFPPKKETSDGEDDDEE 477
Query: 405 KAKLK--ELLRDKSDAFNSDNPEEDKVKLGEP-------GWKERYYEEKFNAKTPEEREE 455
+ L +++ A +D ED K E GWK +YY +KF ++ EE
Sbjct: 478 EGNLAAYRVMKSYDKATIADVSPEDAQKQYEELYQQKYQGWKTKYYLQKFEEWPQDKYEE 537
Query: 456 TRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKP 515
+K + Y G +++F+LG PFKP
Sbjct: 538 EQKRLCENYGLGA-----------------------------------DLNFKLGQPFKP 562
Query: 516 FNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFID 575
QL+GV P S +P Y LMT+ NSPI DFYP DFE+DMNGK+ W+ + K+PFID
Sbjct: 563 NEQLMGVLPDRSKKIVPAVYHDLMTNANSPIIDFYPRDFELDMNGKKMEWEAVVKIPFID 622
Query: 576 EARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
EARLL + L++++ RN + F
Sbjct: 623 EARLLAAMAPQNELLSDDQKARNGFGVPLKFT 654
>gi|256074378|ref|XP_002573502.1| 5'-3' exoribonuclease [Schistosoma mansoni]
gi|350644806|emb|CCD60472.1| 5'-3' exoribonuclease, putative [Schistosoma mansoni]
Length = 928
Score = 303 bits (776), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 152/298 (51%), Positives = 200/298 (67%), Gaps = 4/298 (1%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+++A + ERLR E G LPP + FDSN ITPGT FM+ L
Sbjct: 113 MNQQRSRRFRAAQEAKEKQITIERLRNELIARGAHLPPPKEEH-FDSNCITPGTPFMSRL 171
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
++AL+ YI+ RL DPGW+ + V LSDANVPGEGEHKIM ++R QRN P +D NT+HCL
Sbjct: 172 AVALRGYIYTRLTKDPGWKNLMVFLSDANVPGEGEHKIMDFIRRQRNNPTHDANTKHCLC 231
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P Q C LCGQ GH +C G K + + +E
Sbjct: 232 GADADLIMLGLATHEPYFTIIRE-EFKPNQPKPCDLCGQMGHEMEDCVGAPKEE--DSNE 288
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
+ + F+ + LR+YL + ++ FE DLE ++DD++FMCFFVGNDFLPH
Sbjct: 289 GPPPLPSGDVDFIFIRLNVLRQYLAEDLKLAGITFEWDLERVIDDWVFMCFFVGNDFLPH 348
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 298
+P+LEIREGAI+ L+ +YK + GG+LTD + +L RV+ + +G ED IF+ R
Sbjct: 349 LPSLEIREGAIDRLIDIYKSTVQKTGGWLTDSGRVNLERVQLIMVDLGKMEDEIFKNR 406
Score = 204 bits (518), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 126/376 (33%), Positives = 189/376 (50%), Gaps = 47/376 (12%)
Query: 427 DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFY 486
D+V+ E GW+ RYY+ KF P + V Y GLCWV+ YYY+G SW W++
Sbjct: 482 DEVRFWEDGWRSRYYQSKFGVD-PTDAPGFCIKVGQEYALGLCWVLAYYYQGCASWDWYF 540
Query: 487 PYHYAPFASDLKDLDQFNISF--ELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNS 544
PYHYAPFASD + + ++ F + PF+P QL+ VFP+ S +P ++ LMTDP+S
Sbjct: 541 PYHYAPFASDFSKISELDVDFSKKETKPFRPLEQLMSVFPADSRSHVPPAWQDLMTDPDS 600
Query: 545 PISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADM 604
PI DFYPTDF++D+NGKRY W G+A LPF+DE RLL + + LT+EE RN +D
Sbjct: 601 PIIDFYPTDFKIDLNGKRYLWMGVALLPFVDEVRLLKALDARRNLLTKEEVERNVRGSDQ 660
Query: 605 LFVLLSHPLSASIYTLDEHCKQLKIKERVE------VKERLNPELSDGMNGYISPCAGDP 658
LF HP +++L + + K+ E ++P ++ G++G I P
Sbjct: 661 LFCRADHPAGPLLHSLYKVSTEKAEKDDSEEHIIPSWASAIDPRVTFGISGLIWPNKTT- 719
Query: 659 HPPVFRSPVAS---MEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKPAP 715
+ P R P A + D+ ++ + + P P G +FP K+ LE +K P
Sbjct: 720 YLPGSRVPSAVPGHVPDLKVSEAVSIYFSDPQY-------PKGFVFPSKL--LESVKMPP 770
Query: 716 VLWHE----------DSGRRPHENGRHNPHGTI-------------SGRQL--GEAAHRL 750
++ + S R GR N + + +GR + +R+
Sbjct: 771 PVYLQPPQRGRGRGRGSFRTDEHRGRFNANAAMQYYARDSSSDRENTGRDVYSNSPMNRM 830
Query: 751 VANSLQHMKVDRNGYG 766
V NSL + R G+
Sbjct: 831 VMNSLPRYQRSRGGHS 846
>gi|147866227|emb|CAN79939.1| hypothetical protein VITISV_027778 [Vitis vinifera]
Length = 918
Score = 303 bits (775), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 155/267 (58%), Positives = 189/267 (70%), Gaps = 15/267 (5%)
Query: 20 AEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWE 79
AEE+RLR+++E E + L PK +SQV D N+ITPGT FM +S ALQ YI R+ ++ GW+
Sbjct: 84 AEEQRLRRQYEMEXKPLVPKQESQVSDPNIITPGTVFMHEVSKALQQYICSRMKHEAGWK 143
Query: 80 KIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFS 139
+KVILSD+NVPGEGEHKIMS+ RLQR+LP Y+PNT HCLYGLDADLIMLALATHEVHFS
Sbjct: 144 DLKVILSDSNVPGEGEHKIMSFXRLQRSLPDYNPNTLHCLYGLDADLIMLALATHEVHFS 203
Query: 140 ILREVVFTPGQQDKC--FLCGQPGHLAANCEGKAKR----------KAGEFDEKGDEVVV 187
ILRE V T Q+ C + + AN R K F + +
Sbjct: 204 ILREDVLTLEQRGSCESAVETKTSPPKANSSLVKSRGWFKQVLTVDKTNSFIKNLESKSS 263
Query: 188 PKKPYQFLHIWTLREYLDYEFRIPNPP---FEIDLECIVDDFIFMCFFVGNDFLPHMPTL 244
K PYQFLH+W LREYL+ + +I +PP EI+ E IVDDFIF+CFF+GNDFLPHMPTL
Sbjct: 264 IKMPYQFLHVWILREYLELDMKISDPPEKLKEINFERIVDDFIFLCFFLGNDFLPHMPTL 323
Query: 245 EIREGAINLLMAVYKKEFRALGGYLTD 271
EI EGAI+LLM VYKKEF+ +GGY+ D
Sbjct: 324 EIHEGAIDLLMTVYKKEFKNIGGYMVD 350
Score = 280 bits (715), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 160/370 (43%), Positives = 219/370 (59%), Gaps = 13/370 (3%)
Query: 402 EEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVV 461
+E K +LKE +R KSD + S + D+V+LG PGWKERYY+EK + T + E TRK++V
Sbjct: 410 KEMKKRLKENIRAKSDLWRSGSLGIDRVRLGHPGWKERYYKEKCSCDTSQGIESTRKELV 469
Query: 462 LRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLG 521
+YTEGL WV+ YY+ GV SW WFYPYHY PFASD K L + E G PFKPF+QL+G
Sbjct: 470 QKYTEGLLWVLQYYFSGVPSWTWFYPYHYGPFASDFKGLSRVKAKXEKGSPFKPFDQLMG 529
Query: 522 VFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLD 581
V P +S+HALP+ Y+ LM D +S I DFY T+FEVD +GKR+ WQGI KLPFIDEARLL
Sbjct: 530 VLPPSSAHALPKAYQPLMIDEDSNIIDFYNTNFEVDTDGKRFIWQGICKLPFIDEARLLA 589
Query: 582 EVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNP 641
E +K+E L E+EA RN+ D LF+ S L S Y C+ + +++
Sbjct: 590 ETRKLEKELEEQEAVRNARSFDHLFLRFSDKLR-SFYXEQVSCR------KPNKTAKIDS 642
Query: 642 ELSDGMNGYISPCAGDPHPPVFRSPV--ASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGV 699
S G+NGYI C + + S ++E+I + V+ +Y++P+ H+ RP G
Sbjct: 643 NFSLGINGYI--CFDNNGLNMMNSTCLDKNLENIQEDDVISMLYEVPNGCLHIPRPLEGT 700
Query: 700 IFPKKIVQLEDLKPAPVLWHEDSGRRPHENGR-HNPHGTISGRQLGEAAHRLVANSLQHM 758
IFP K + D++ +LWHE G +P R H G R +A ++ +
Sbjct: 701 IFPFKTITEADIEET-LLWHEYKGSKPPVKFRGHEGFGPAINRLKSKACGSSTISAAGGL 759
Query: 759 KVDRNGYGDR 768
V R G+ R
Sbjct: 760 NVARAGWSTR 769
>gi|148696566|gb|EDL28513.1| 5'-3' exoribonuclease 2, isoform CRA_a [Mus musculus]
Length = 915
Score = 301 bits (772), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 147/266 (55%), Positives = 187/266 (70%), Gaps = 1/266 (0%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 111 MNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 171 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 231 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCALCNQFGHEVKDCEGLPREKKGKHDE 289
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 290 LADSLPCAEGEFIFLRLNVLREYLERELTMASLPFPFDVERSIDDWVFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALG 266
+P+LEIREGAI+ L+ +YK G
Sbjct: 350 LPSLEIREGAIDRLVNIYKNVVHKTG 375
Score = 234 bits (596), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 132/302 (43%), Positives = 179/302 (59%), Gaps = 21/302 (6%)
Query: 412 LRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWV 471
++ K++ +S+ ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV
Sbjct: 456 IKRKAEDSDSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWV 513
Query: 472 MHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHA 530
+ YYY+G SW+W+YP+HYAPFASD + + + FE G PFKP QL+GVFP+AS +
Sbjct: 514 LRYYYQGCASWKWYYPFHYAPFASDFEGIADMSSEFEKGTKPFKPLEQLMGVFPAASGNF 573
Query: 531 LPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTL 590
LP +RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ L
Sbjct: 574 LPPTWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDL 633
Query: 591 TEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGY 650
T EE RRNS+ D+LFV HPL I L Q E V+V PEL G+ G
Sbjct: 634 TPEENRRNSLGGDVLFVGKLHPLRDFILEL----YQTGSTEPVDVP----PELCHGIQGT 685
Query: 651 ISPCAGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHV--------TRPPAGVI 700
S P SPV + D+ N + +K P A +V R PA V+
Sbjct: 686 FSLDEEAILPDQTVCSPVPMLRDLTQNTAVSINFKDPQFAEDYVFKAAMLPGARKPATVL 745
Query: 701 FP 702
P
Sbjct: 746 KP 747
>gi|403368617|gb|EJY84145.1| 5'-3' exoribonuclease 2 [Oxytricha trifallax]
Length = 1735
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 210/706 (29%), Positives = 332/706 (47%), Gaps = 138/706 (19%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR +KD+ + L+ +F++EG++ P +FDSN I+PGT+FM L
Sbjct: 99 MNQQRARRFRTAKDS-------QLLKDKFQKEGKEAPT-----LFDSNAISPGTKFMEEL 146
Query: 61 SIALQYYIHLRLNNDPGWEKI-KVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
S L +++ + N DP ++ + KVILSDA VPGEGEHK+M ++R ++ YDPNTRHC
Sbjct: 147 SKQLDFFVQYKQNTDPVYQNLEKVILSDAFVPGEGEHKMMDFIRQAKHDENYDPNTRHCF 206
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANC-EGKAKRKAGEF 178
YG DADLIML+L THE +F ILRE H+ +G +R
Sbjct: 207 YGADADLIMLSLLTHEPNFIILRE-----------------EHVVRKIKQGGVQR----L 245
Query: 179 DEKGDEVVVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGND 236
D K YQ + I LREY E+R P + DLE I+DDF+F CFF+GND
Sbjct: 246 DLKR------TNNYQVMFINLLREYFLLEYRAVAPQMKMKFDLERIIDDFVFFCFFIGND 299
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP + L+I EG+++ ++ +YK+ ++ Y+T+ + R E FI+ +G +E F+
Sbjct: 300 FLPSLSALDIGEGSLDSIIDLYKRLLPSMENYITEEGRIYWDRAEPFIKMLGEHEHDSFK 359
Query: 297 KRA-RLHQRHAERI-----------------------KREKAQARRGDDVEPLA------ 326
R ++ ERI REK ++ + ++
Sbjct: 360 NRVNKIGAMRNERIISFDPEFNQASTTSNRTQLIQQRIREKLNDKKRKKILGISQKKKDK 419
Query: 327 QPDSLVPVSRFHGSRLASGPSPSPYQ---------------QSECVGRLDNGKGTSGRPH 371
Q + + RF + + Q Q++ + G+ S
Sbjct: 420 QTKKFLLLKRFEEDEINQSLTMKQRQIRDYALIKYKKLWERQTQELNSQSEGQPLSEESK 479
Query: 372 KVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKL 431
KV L I E + + ++ E + E+ D N + E+KVK+
Sbjct: 480 KVESLKE--IISNLKEEYFSDLNIEDIDDDEVSEISESEINMDDIQDVNLNQELENKVKV 537
Query: 432 GEPGWKERYYEEKF---------------NAKTPEEREETRKDV------------VLRY 464
+++Y ++ F NAK R + + DV +++Y
Sbjct: 538 S-MDLQDKYEQQNFEFMQEFIKLYQNEPENAKAMYYRAKVKFDVTTIEGRSLKKKMLMKY 596
Query: 465 TEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKD------------LDQFNISF---EL 509
EGL WV++YYY G W+W+YPYHYAP SDL + +D+F I ++
Sbjct: 597 LEGLQWVLYYYYRGAQHWRWYYPYHYAPMISDLDENIVNNFLGGKRYIDEFEIDHNCADI 656
Query: 510 GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIA 569
P+ PF QLL + P+ S H LP Y K++ + ++P +F++D+NG+ +++
Sbjct: 657 NEPYTPFQQLLSILPAKSLHLLPSQYAKIVL---GELRQYFPDEFDIDLNGRTLAYEAAC 713
Query: 570 KLPFIDEARLLDEVKKI--EHTLTEEEARRNSIMADMLFVLLSHPL 613
+PF DE + + + ++ L + + RN + D H L
Sbjct: 714 LIPFCDEKLFIGQETSLLRDNPLNDHDDSRNIVAFDYKVYTYDHLL 759
>gi|149041186|gb|EDL95119.1| 5'-3' exoribonuclease 2 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 915
Score = 301 bits (770), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 147/266 (55%), Positives = 187/266 (70%), Gaps = 1/266 (0%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L
Sbjct: 111 MNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNL 170
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL
Sbjct: 171 AKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLC 230
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE
Sbjct: 231 GADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCALCNQFGHEVKDCEGLPREKKGKHDE 289
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH
Sbjct: 290 LADSLPCAEGEFIFLRLNVLREYLERELTMASLPFPFDVERSIDDWVFMCFFVGNDFLPH 349
Query: 241 MPTLEIREGAINLLMAVYKKEFRALG 266
+P+LEIREGAI+ L+ +YK G
Sbjct: 350 LPSLEIREGAIDRLVNIYKNVVHKTG 375
Score = 234 bits (596), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 133/302 (44%), Positives = 179/302 (59%), Gaps = 21/302 (6%)
Query: 412 LRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWV 471
L+ K++ +S+ ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV
Sbjct: 456 LKRKAEDSDSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWV 513
Query: 472 MHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHA 530
+ YYY+G SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS +
Sbjct: 514 LRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSEFEKGTKPFKPLEQLMGVFPAASGNF 573
Query: 531 LPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTL 590
LP +RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ L
Sbjct: 574 LPPTWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDL 633
Query: 591 TEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGY 650
T EE RRNS+ +D+LFV HPL I L Q E V+V PEL G+ G
Sbjct: 634 TPEENRRNSLGSDVLFVGKVHPLHDFILEL----YQTGSTEPVDVP----PELCHGIQGK 685
Query: 651 ISPCAGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHV--------TRPPAGVI 700
S P SPV + D+ N + +K P A +V R PA V+
Sbjct: 686 FSLDEEAILPDQTVCSPVPMLRDLTQNTAISINFKDPQFAEDYVFKAIMLPGARKPAAVL 745
Query: 701 FP 702
P
Sbjct: 746 KP 747
>gi|397607914|gb|EJK59848.1| hypothetical protein THAOC_19883 [Thalassiosira oceanica]
Length = 773
Score = 300 bits (767), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 218/640 (34%), Positives = 304/640 (47%), Gaps = 120/640 (18%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR+SK+A AA R+G LP + FDSN ITPGT+FM L
Sbjct: 155 MNQQRSRRFRSSKEAEKLAA------TILARDG-SLPER---DAFDSNCITPGTDFMLKL 204
Query: 61 SIALQYYIHLRLNNDPGWEK-IKVILSDANVPGEGEHKIMSYVRLQRNL---------PG 110
+A++ +I + DP W+ V++S +VPGEGEHK+M ++R + L P
Sbjct: 205 GLAMRKWIEYKQQTDPAWKNGCDVVVSGPDVPGEGEHKVMDFIRDTKALYDPDDLEKSPH 264
Query: 111 YDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGK 170
+ P+ H LYGLDADLIML LATHE HF +LRE ++ G+
Sbjct: 265 WQPSLTHVLYGLDADLIMLGLATHEPHFLLLRE------------------KMSVVMAGR 306
Query: 171 AKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFR----IPNPPFEIDLECIVDDF 226
+ K +K D + + + L + +LRE +FR + D+ ++DDF
Sbjct: 307 GRHK---HRKKKDMLEYTRNDFDLLELSSLREMFKIQFRKFADSDRLKVQYDVCRVIDDF 363
Query: 227 IFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQA 286
IFMC FVGNDFLPH+P LEI GA++L++ Y GGYLTD K R+E F
Sbjct: 364 IFMCMFVGNDFLPHVPHLEIDNGALSLMLNNYIDLLPEWGGYLTDKGKIHPARLEQF--- 420
Query: 287 VGSYEDRIFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGP 346
F A + H R E+ + G E Q D F+G P
Sbjct: 421 --------FYNLAVFEEEHFRRRAYEENEPGWGLGTEN-EQDDE-----DFYGEWYGGTP 466
Query: 347 SPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKA 406
+P +++ G +++ G E+E+ ET + + K
Sbjct: 467 TPLVAKEA--------NDGLVVETNRIDIDGGG--------ESESQAETTAPDTAPKTKV 510
Query: 407 KLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFN----AKTPEEREETRKDVVL 462
+ K DA S ++E YYE K E + R+ +
Sbjct: 511 EKKFKKLHPRDASRS--------------YREFYYESKLGISPLVTNRAEAQRDRRAIAR 556
Query: 463 RYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQF----NIS---------FEL 509
Y EGL W ++YY+ G CSW WF+P+ YAP ++D+ +L +F +IS F+
Sbjct: 557 DYLEGLHWNLNYYHSGCCSWSWFFPHLYAPLSTDMVNLSEFYGDEDISPTDNDGFREFKF 616
Query: 510 GH--PFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQG 567
G+ PF P QLL V P S+ LP +LMT+P+SP++ FYP DF+ D NGKR W+
Sbjct: 617 GNTEPFPPLAQLLSVLPPQSASLLPPSLGELMTEPSSPLAPFYPNDFDSDPNGKRQPWEA 676
Query: 568 IAKLPFIDEARLLDEVKKIEHT---------LTEEEARRN 598
I K+PFID +LLD V I LT E RRN
Sbjct: 677 IVKIPFIDGDQLLDVVNGILEADEKPLTGELLTNAERRRN 716
>gi|449687936|ref|XP_002167193.2| PREDICTED: 5'-3' exoribonuclease 1, partial [Hydra magnipapillata]
Length = 487
Score = 300 bits (767), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 198/553 (35%), Positives = 284/553 (51%), Gaps = 86/553 (15%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR +K+A EE +R+ ++ G+ LPP FDSN ITPGTEFM L
Sbjct: 12 MNQQRSRRFRTAKEA------EEAIRKAIQK-GQTLPPDDR---FDSNCITPGTEFMWRL 61
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++ ++++DP W++ + LS +VPGEGEHK+M ++R ++ P YDPNTRHCLY
Sbjct: 62 QHQLKYFVNQKISSDPLWQECTIYLSGHDVPGEGEHKVMDFIRYCKSKPDYDPNTRHCLY 121
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L+THE HFS+LRE + G+Q K L
Sbjct: 122 GLDADLIMLGLSTHEPHFSLLREEI-RYGKQSKRLL------------------------ 156
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPP--FEIDLECIVDDFIFMCFFVGNDFL 238
+ DE + + LH+ LREYL+ EF I F D E I+DD+IF+ F VGNDF+
Sbjct: 157 RPDE-----QTFHLLHLSLLREYLEMEFIIVKDLLHFRFDTERIIDDWIFLGFLVGNDFV 211
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 298
PH+P + I A+ + +YK+ GYL DG +L R++ F + + ++ R
Sbjct: 212 PHLPHMHINHDALPYIFKIYKEFLPTTDGYLNDGGMINLCRLKKFFEFLSKFD------R 265
Query: 299 ARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVG 358
R H+ +A D++ L S G L + +
Sbjct: 266 ERFHEVYA--------------DLKWLESKGS--------GKLLENSAGKKKFADVMREL 303
Query: 359 RLDNGKGTSGRPHKVPRLSSGATIGAAIVEA--ENSFETDPQENKEEFKAKLKELLRDKS 416
L+ K S +I A I A E S P++ KLK L +
Sbjct: 304 ALEELNEDLEEIRKSKLFDSQYSINANISGAFDELSLNLTPEK-----PGKLKTL----N 354
Query: 417 DAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYY 476
D ++ E +++ + K YY EKF+ + E + + Y L W+ HYY+
Sbjct: 355 DDIEVEDDETFELEFQQH--KRHYYMEKFDMDIAD--NEHIQTICTEYVIALQWISHYYF 410
Query: 477 EGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYR 536
G+ SW W+YPYHY+P+ SD+ + + I+FE+GHPF PF QLL V P+AS LPE Y
Sbjct: 411 NGLQSWSWYYPYHYSPYISDVANFELKEINFEMGHPFLPFEQLLAVLPAASRKLLPEAY- 469
Query: 537 KLMTDPNSPISDF 549
++M ISD+
Sbjct: 470 QVMISFYDYISDY 482
>gi|395330505|gb|EJF62888.1| 5'-3' exoribonuclease 2 [Dichomitus squalens LYAD-421 SS1]
Length = 1182
Score = 299 bits (766), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 151/327 (46%), Positives = 216/327 (66%), Gaps = 18/327 (5%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQE----FEREGRKLPPK-SDSQVFDSNVITPGTE 55
MNQQRSRRFR++++A E+E R+E +E G+ L + + + +DSN ITPGT
Sbjct: 116 MNQQRSRRFRSAQEAK----EKEEARKESIAMWEAMGKTLSEEEKNKKAWDSNAITPGTP 171
Query: 56 FMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNT 115
FM +L+ +L+Y++ ++N DPGW+ ++VI+SDA+VPGEGEHKIM ++R QR+ PG+DPNT
Sbjct: 172 FMDLLASSLRYWVVYKMNTDPGWKDVQVIISDASVPGEGEHKIMDFIRRQRSNPGHDPNT 231
Query: 116 RHCLYGLDADLIMLALATHEVHFSILREVVF-TPGQQDKCFLCGQPGHLAANCEGKAKRK 174
H +YGLDADLIML+LATHE HF +LRE VF G + C +CGQ GH AA C G
Sbjct: 232 HHVIYGLDADLIMLSLATHEPHFRVLREDVFHQEGSRTACRICGQEGHYAAQCTG----T 287
Query: 175 AGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVG 234
E + E KKP+ FL + LREYL+ E +PN PF + E +DD++ + FFVG
Sbjct: 288 KAEIKKTPPE----KKPFIFLDVAILREYLEAELNVPNVPFPFNFEQAIDDWVLLIFFVG 343
Query: 235 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI 294
NDFLPH+P+LEIREGAI+ L+ +++ E +GGY+T+ + L R + ++ + ED I
Sbjct: 344 NDFLPHLPSLEIREGAIDTLLKIWRTELPRMGGYITNHGQLELSRAQIILEGLARREDEI 403
Query: 295 FQKRARLHQRHAERIKREKAQARRGDD 321
F++R +R + KR K + G +
Sbjct: 404 FRRRREAEERQDQNAKRRKIEKETGSN 430
Score = 240 bits (612), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 128/298 (42%), Positives = 184/298 (61%), Gaps = 22/298 (7%)
Query: 425 EEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQW 484
+ED+VKL EPG++ERYY +KF A+ ++ E RK V Y EG+ WV+ YYY+G SW W
Sbjct: 677 QEDQVKLWEPGYRERYYSQKFGAEYSDK--EFRKQVTKSYIEGMAWVLQYYYQGTPSWHW 734
Query: 485 FYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNS 544
+YP+H+APFA+D +DLD+ +I F LG PFKPF QL+GVFP++S +P + LMT+ S
Sbjct: 735 YYPFHFAPFAADFEDLDKMDIDFTLGQPFKPFEQLMGVFPASSRSHIPATFHDLMTEDTS 794
Query: 545 PISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADM 604
PI DFYP+ F++DMNGKR +WQG+A LPFIDE RLLD + L+++E RRN +
Sbjct: 795 PIIDFYPSTFQIDMNGKRMAWQGVALLPFIDEKRLLDAMGPRYPNLSDDEKRRNQWGNNF 854
Query: 605 LFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISP---CAGDPHPP 661
LFV +H L ++ + L K + + +NP+LS G+NG + P C D
Sbjct: 855 LFVYEAHALYPTL-------EALYGKRKKDEPLPINPKLSKGINGSLLPNPDCIPD---S 904
Query: 662 VFRSPVAS--MEDIMGNQVLCAIYKLP---DAHKHVTRPPAGVIFPKKIVQLEDLKPA 714
+ SP+ S + +I ++ L A Y P H+ + P GV P+ ++ DL+ A
Sbjct: 905 TYFSPLPSQDLPNIKNDRSLSAFYFFPKQLTPHRSILLP--GVRRPQPVLNAHDLEVA 960
>gi|189191016|ref|XP_001931847.1| 5'-3' exoribonuclease 2 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187973453|gb|EDU40952.1| 5'-3' exoribonuclease 2 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 1104
Score = 290 bits (741), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 151/330 (45%), Positives = 208/330 (63%), Gaps = 18/330 (5%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFER----------EGRKLPPKSDSQVFDSNVI 50
MNQQRSRRFRA+++A E++ R EF++ E + + +DSN I
Sbjct: 111 MNQQRSRRFRAAREAK----EKDEERAEFQKILNSQKASRGEDINTLEEVVEKTWDSNAI 166
Query: 51 TPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPG 110
TPGT FM +L+ +LQY+ + DP W+ +KVI+SDA+VPGEGEHKIM+++R QR +P
Sbjct: 167 TPGTPFMHLLAESLQYWCAYKFTTDPSWKDMKVIISDASVPGEGEHKIMNFIRSQRAMPT 226
Query: 111 YDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEG 169
+DPNT H +YGLDADLIML+LATHE HF +LRE VF +DK C CG+ GH+ NCE
Sbjct: 227 HDPNTSHVIYGLDADLIMLSLATHEPHFKVLREDVFYDSGKDKVCTRCGRKGHIRTNCEF 286
Query: 170 KAKRKAGEFDEKGDEVVVPK---KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDF 226
K +E +E + KPY +LH LREYL E P F+ DLE +DD+
Sbjct: 287 PEDEKKLTEEEAAEEWATSEHQLKPYIWLHTNVLREYLAVEMDTPKRTFKYDLERSLDDW 346
Query: 227 IFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQA 286
+FMCFFVGNDFLPH+P+LEIR+ I+LL+++++ + Y+T P +RRV+ + A
Sbjct: 347 VFMCFFVGNDFLPHLPSLEIRDQGIDLLISIWRDLAAEMDDYVTKDGYPDMRRVQQIMSA 406
Query: 287 VGSYEDRIFQKRARLHQRHAERIKREKAQA 316
+ S E IF+KR + R A R +AQ+
Sbjct: 407 LASREAGIFKKRKEVADRQAANRARREAQS 436
Score = 200 bits (508), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 119/298 (39%), Positives = 171/298 (57%), Gaps = 25/298 (8%)
Query: 422 DNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCS 481
D+P ED + L E G++ERYYE+KF+ P + R V +Y EGLCWV+ YY +G S
Sbjct: 581 DSPPEDTIMLWEDGYEERYYEQKFHV-APNDIA-FRNKVARQYAEGLCWVLAYYMQGCPS 638
Query: 482 WQWFYPYHYAPFASD---LKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKL 538
W W++P+HYAPFA+D L+D+D + FE G PF P+ QL+GV P+AS+HA+PE +R L
Sbjct: 639 WTWYFPHHYAPFAADFVGLEDMDPRKL-FEKGVPFHPYEQLMGVLPAASNHAIPEPFRVL 697
Query: 539 MTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
M DPNS I DFYP DF +D+NGK+++WQG+A LPFIDE RLL+ + L+++E +RN
Sbjct: 698 MEDPNSSIVDFYPEDFPIDLNGKKFAWQGVAVLPFIDEKRLLEAMATKYPELSDDERKRN 757
Query: 599 SIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISP----C 654
+ L S D+ K L K + K +++P S ++G I P
Sbjct: 758 EFGKETLM------FSQESGLFDDVEKALYRKG--QQKHKIDPAKSRALHGDIEPHDLFV 809
Query: 655 AGDPHPPVFRSPVASMEDIMGNQVLCAIYKLPD-----AHKHVTRPPAGVIFPKKIVQ 707
P F + + +I ++ + Y++P AHK V GV PK +Q
Sbjct: 810 MDSQLVPPFDADGTTDFEITQDRSMRVYYEMPSISSSRAHKSVLL--EGVKLPKPALQ 865
>gi|7509723|pir||T26774 hypothetical protein Y39G8C.b - Caenorhabditis elegans
Length = 1801
Score = 288 bits (738), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 190/526 (36%), Positives = 267/526 (50%), Gaps = 56/526 (10%)
Query: 90 VPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILRE-VVFT- 147
VPGEGEHKIM ++R +R YDPNTRHC+YGLDADLIML + +HE HFS+LRE V F
Sbjct: 269 VPGEGEHKIMDFIRTERAGSSYDPNTRHCMYGLDADLIMLGIVSHEPHFSLLREEVTFNT 328
Query: 148 -PGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDY 206
P + D KA +K D K + LH+ LREYL +
Sbjct: 329 RPRKND----------------NKATKKPKRTDSDV-------KKFHLLHLSLLREYLAW 365
Query: 207 EFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRA 264
EF + PFE ++E IVDD+I + VGNDFLPH+P + I + A+ LL + YKK
Sbjct: 366 EFADVKDSLPFEYEMERIVDDWILLGLLVGNDFLPHLPNIHIHDDALPLLYSTYKKVLPT 425
Query: 265 LGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIKREK-AQARRGDDVE 323
L GY+ + +L R E F+ + + F ER++ E+ +++R V+
Sbjct: 426 LDGYINEAGYLNLSRFEAFLAELALNDKTSFM----------ERLEDEQFMESKRIRVVD 475
Query: 324 P----LAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSG 379
P LA+P+ + S + S + D+ S L G
Sbjct: 476 PEQQELAEPELVAFESSDVEDEAGAEESKDEAGGAGAEDDEDDAAFVSDHEEDGDDLEPG 535
Query: 380 ATIGAAIVEAENSFETDPQENKEEFKAKLKEL-LRDKSDAFNSDNPEEDKVKLGEPGWK- 437
+ ++ D Q ++EF +L L L +DA +++ E K +K
Sbjct: 536 SGSDELLLS-----NLDAQLLEDEFNDELATLALSGMNDADFANDVEACWTKTINNQFKR 590
Query: 438 --ERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 495
+ YY +K K +++ ++ Y + W +HYYY G SW WFYP+HYAPF S
Sbjct: 591 HKKTYYSDKLRYKNISKQQ--LREQAEGYVRAIQWNLHYYYHGCVSWSWFYPHHYAPFIS 648
Query: 496 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLM-TDP-NSPISDFYPTD 553
D++ + FEL PF PF QLL V P AS+ LP R+LM +DP SPI DFYP +
Sbjct: 649 DVRGFVGMRMEFELSEPFHPFEQLLAVLPEASADCLPRPLRELMSSDPAKSPICDFYPAN 708
Query: 554 FEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 599
FE D+NGKR W+ + +PFI+E RLL+ ++ LT EE RNS
Sbjct: 709 FETDLNGKRNEWEAVVLIPFIEEKRLLEAIEAKRSRLTSEENARNS 754
Score = 47.8 bits (112), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 47/102 (46%), Gaps = 12/102 (11%)
Query: 1 MNQQRSRRFR--------ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITP 52
MNQQR+RRF K+ + +L + E G +P ++ FDSN ITP
Sbjct: 94 MNQQRARRFMYVEELLLAGKKEIWSARTAHTQLAKALEN-GEIMPSEAR---FDSNCITP 149
Query: 53 GTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEG 94
GT FM L L +I + D W+ K+ILS N G
Sbjct: 150 GTYFMTRLHQKLDDWIKTKSATDSRWQGRKIILSGHNQKKSG 191
>gi|406701694|gb|EKD04809.1| strand exchange protein (5'-3' exoribonuclease) [Trichosporon
asahii var. asahii CBS 8904]
Length = 1632
Score = 288 bits (737), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 154/332 (46%), Positives = 214/332 (64%), Gaps = 20/332 (6%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKS-DSQVFDSNVITPGTEFMAV 59
MNQQRSRRFRAS++AA+ E ++ FE G+ + ++ + + +DSN ITPGT FM +
Sbjct: 57 MNQQRSRRFRASQEAAEKEEERKQQIAMFEAMGQTVSDETKNKKSWDSNAITPGTPFMDL 116
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
LS +L+Y++ +L+ DPGW+ VI+SDA+VPGEGEHKI+ ++R +R P +DPNT H +
Sbjct: 117 LSASLKYWVSHKLSTDPGWKD--VIISDASVPGEGEHKIVDWIRRERTYPEWDPNTSHAI 174
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDK--CFLCGQPGHLAANCEGKAKRKAGE 177
YGLDADLIMLALATHE +F +LRE VF + C CG+ GH+ ANC+G+ K
Sbjct: 175 YGLDADLIMLALATHEPNFRVLREDVFAQSSRGPRVCDNCGKEGHIKANCKGEKKMP--- 231
Query: 178 FDEKGDEVVVPK------KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCF 231
D VV K KP+ +L + LR+YL E +P F D E +DD+IFM F
Sbjct: 232 -----DPNVVAKAKPEDPKPFIWLDVACLRDYLAVELNVPTS-FPFDQELAIDDWIFMIF 285
Query: 232 FVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYE 291
FVGNDFLPH+P+LEIREGAI+ L+ ++K+E +GGYLT+ K +L R + + + + E
Sbjct: 286 FVGNDFLPHLPSLEIREGAIDTLLEIWKRELDRMGGYLTNHGKVNLGRAQIILDGIAARE 345
Query: 292 DRIFQKRARLHQRHAERIKREKAQARRGDDVE 323
D IFQ+R R KR + + R D+E
Sbjct: 346 DNIFQQRKEQEDRQERNAKRRRKEDHRRQDME 377
Score = 213 bits (541), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 95/182 (52%), Positives = 128/182 (70%), Gaps = 2/182 (1%)
Query: 426 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 485
ED V+L EPG++ERYY +KF + +++ ++ Y EGLCWV+ YYY+GV +W W+
Sbjct: 575 EDTVRLWEPGYRERYYRQKFGVELSDKK--FMSEITRSYMEGLCWVLEYYYQGVPAWDWY 632
Query: 486 YPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 545
YPYHYAPFA D D+ +I F G+PF PF QLLGVFP+AS LPE + LM + +SP
Sbjct: 633 YPYHYAPFAQDFHDVGSLDIKFRKGNPFTPFGQLLGVFPAASRIHLPEPLQTLMIEEDSP 692
Query: 546 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 605
I DFYP+DFE+DMNGK+ +WQG+A LPFID+ RLL +K E L+++E RRN+ +
Sbjct: 693 IIDFYPSDFEIDMNGKKMAWQGVALLPFIDQHRLLAALKSKEPELSQDEKRRNTWGEPRM 752
Query: 606 FV 607
FV
Sbjct: 753 FV 754
>gi|195338777|ref|XP_002036000.1| GM16241 [Drosophila sechellia]
gi|194129880|gb|EDW51923.1| GM16241 [Drosophila sechellia]
Length = 464
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 157/321 (48%), Positives = 198/321 (61%), Gaps = 3/321 (0%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAV 59
MNQQRSRRFRA+K+ + E R+R+E G KLPP K FDSN ITPGT FM
Sbjct: 112 MNQQRSRRFRAAKETTEKRLEVARIREELLSRGCKLPPEKEKGDHFDSNCITPGTPFMDR 171
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
LS L Y++H RLNN+P W+ IKVILSDANVPGEGEHKIM Y+R QR P +DPNT+H L
Sbjct: 172 LSKCLHYFVHDRLNNNPAWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHVL 231
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
G DADLIML LATHE +F+I+RE F P + C +C GH C G +
Sbjct: 232 CGADADLIMLGLATHEPNFTIIRE-EFLPNKPRPCDICNGFGHEMDKCVGLGATAPTSAN 290
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
K D + + + F+ + LREYL +PN PFE E +DD++FMCFFVGNDFLP
Sbjct: 291 FKPDVPIGAEVKFIFVRLSVLREYLKQTLEMPNLPFEYSFERALDDWVFMCFFVGNDFLP 350
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIREG ++ L+ +YKK G G S RV+ + +G+ ED+IF+ R
Sbjct: 351 HLPSLEIREGTVDRLVELYKKCVYRQGLSHRLGRCKS-DRVQLIMTDLGNAEDQIFKSRQ 409
Query: 300 RLHQRHAERIKREKAQARRGD 320
R ++ R K K Q R D
Sbjct: 410 RREEQFKARDKARKRQERNQD 430
>gi|340057226|emb|CCC51568.1| putative exoribonuclease 2 [Trypanosoma vivax Y486]
Length = 783
Score = 286 bits (731), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 212/700 (30%), Positives = 316/700 (45%), Gaps = 133/700 (19%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+++ A+S + E G LP S +D NVITP T FM L
Sbjct: 109 MNQQRSRRFRAAEERAESDQLAMQCADELVEMG--LPRPSPKSRWDHNVITPSTPFMERL 166
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+A++++I ++N DP W+K+ V+ SD++VPGEGEHKIM ++R R+ PGY+P T H +Y
Sbjct: 167 GVAVEWFIGKKVNEDPAWQKVAVVFSDSHVPGEGEHKIMQFIRGLRSQPGYNPQTSHVIY 226
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G+DADLI L L+THE + +ILR + Q G P
Sbjct: 227 GMDADLICLGLSTHEENVTILRNQLSETFQ-------GTPN------------------- 260
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFR-IPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
+ + ++ R++L +F+ I N +D E ++DDF+F+CFFVGNDFLP
Sbjct: 261 ----------TFCYFSLFKYRQFLKRDFKNIAN----MDFERVIDDFVFLCFFVGNDFLP 306
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQ-AVGSYEDRIFQKR 298
H+P L I+ I L+ Y ++F+ YLT+ + + F++ V Y + Q+
Sbjct: 307 HVPLLSIKTKGIESLLDHYVRDFQN-HSYLTEKGEVKFGVLSSFLRHFVVDYLCALRQEY 365
Query: 299 ARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVG 358
L R+ + R + R
Sbjct: 366 LEL--RNVTKRARANVEQRL---------------------------------------- 383
Query: 359 RLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDA 418
GKG + + L + A + EA + + + + F A + + +D
Sbjct: 384 ----GKGENELKEVLDSLKEDGSNAAEVSEAAHGIKLSLAKERARFVADRESMGFSYTD- 438
Query: 419 FNSDNPEEDKVKLGEPGWKERYYEEKF--NAKTPEEREETRKDVVLRYTEGLCWVMHYYY 476
P +++ YYE+KF +A E+ K + Y G WVM YY
Sbjct: 439 ---------------PDYRDAYYEKKFGWSASNRTRFEKQIKRLCGEYLRGTQWVMRYYT 483
Query: 477 EGVCSWQWFYPYHYAPFASDLKDLD-QFNISFELGHPFKPFNQLLGVFPSASSHALPEHY 535
G +W+W+YPYHYAP DL + N+ ELG P P QLL V P S HALP
Sbjct: 484 SGCPAWEWYYPYHYAPLLEDLAAFNGNVNVKMELGAPRHPIVQLLAVQPRLSLHALPVEL 543
Query: 536 RKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEA 595
+ DP+S + FYP EVD + +S+QGI +LPFID LL + TL E E
Sbjct: 544 HSAVMDPHSVLGKFYPDSVEVDYSEANFSYQGIMRLPFIDCQELLRACE----TLVELEP 599
Query: 596 RRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDG--MNGYISP 653
R S +LF +S + + L L + + + P ++ ++G+I P
Sbjct: 600 DRGST---LLFCHMSSRIGKLLRAL------LDNGDANSTMQSITPNVASKFPISGFIGP 650
Query: 654 C-AGDPHPPVFRSPVASM-------EDIMGNQVLCAIYKL 685
G P + P A + I N + C Y+L
Sbjct: 651 SEEGWPLHAKLKCPDAGVARNTSYGRSIRNNCMCCFAYEL 690
>gi|395510147|ref|XP_003759342.1| PREDICTED: 5'-3' exoribonuclease 2-like, partial [Sarcophilus
harrisii]
Length = 273
Score = 285 bits (729), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 140/263 (53%), Positives = 182/263 (69%), Gaps = 1/263 (0%)
Query: 36 LPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGE 95
LPP+ + FDSN ITPGTEFM L+ L+YYI RLNNDPGW+ + VILSDA+ PGEGE
Sbjct: 3 LPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGE 62
Query: 96 HKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCF 155
HKIM Y+R QR P +DPNT HCL G DADLIML LATHE +F+I+RE F P + C
Sbjct: 63 HKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCG 121
Query: 156 LCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPF 215
LC Q GH +C+G + K GE D+ + + + + ++ + LREYL+ E + + PF
Sbjct: 122 LCNQLGHEVKDCQGLPREKQGEHDQFEESLPASEGEFIYIRLNVLREYLERELTMASLPF 181
Query: 216 EIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKP 275
D+E +DD++FMCFFVGNDFLPH+P+LEIREGAI+ L+ +YK GGYLT+
Sbjct: 182 TFDIERSIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGYV 241
Query: 276 SLRRVEHFIQAVGSYEDRIFQKR 298
+L+RV+ + AVG ED IF+KR
Sbjct: 242 NLQRVQMIMLAVGEVEDSIFKKR 264
>gi|154413474|ref|XP_001579767.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
gi|121913977|gb|EAY18781.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
Length = 710
Score = 284 bits (727), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 210/614 (34%), Positives = 285/614 (46%), Gaps = 135/614 (21%)
Query: 1 MNQQRSRRFRASKDAADSAAE--EERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMA 58
MNQQRSRRFRA+KD+ + + +E + ++E K+ + Q DSN+ITPGT+FM
Sbjct: 106 MNQQRSRRFRAAKDSEYNRNKNFQELITLGKQKEAEKIMKEQYIQDHDSNIITPGTKFMC 165
Query: 59 VLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHC 118
LS L+ +I N P W I +ILSDA+VPGEGEHKIM ++R+QR GY+PNTRH
Sbjct: 166 DLSQILRSFISEMQNTSPAWSNIAIILSDASVPGEGEHKIMEFIRIQRLTDGYNPNTRHV 225
Query: 119 LYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEF 178
+YGLDADLI LALA+HEV+FSILRE +F + DK
Sbjct: 226 MYGLDADLIFLALASHEVYFSILRENIFDKKENDK------------------------- 260
Query: 179 DEKGDEVVVPKKPYQFL--HIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGND 236
P P F+ +I+ LR+YLD E +I + F DLE ++DD +F+CF GND
Sbjct: 261 ---------PIGPSSFIFANIFVLRQYLDRELQI-DVKFGWDLERVIDDIVFLCFAAGND 310
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP +P EI G ++ L YKK L Y+T+ ++ + F+ E
Sbjct: 311 FLPQIPGFEIPRGFVDQLFERYKKLLPQLSSYITNTGDVEMKNLLPFMLGFDYLE----- 365
Query: 297 KRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSEC 356
P+S+ H PS SE
Sbjct: 366 -------------------------------PESV------HN---IVSPSERSISVSEY 385
Query: 357 VGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKS 416
V L N T +P +L + F+ + Q N E + K RDK
Sbjct: 386 VNNLCNDVKTEYKPENDKKLVTA------------KFQKN-QNNLEIYDTK-----RDKK 427
Query: 417 DAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLR-YTEGLC-WVMHY 474
+ S K G +E++ N K + VL+ YT+G+ W Y
Sbjct: 428 FYYQS--------KFG--------FEDEENIKNVVHEYCKGMEWVLKYYTKGVASWSWFY 471
Query: 475 YYEGVCSWQWFYPYHYAPFASD--LKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALP 532
Y H AP SD L D D N F LGHPF P QL+ V P SS LP
Sbjct: 472 PY------------HSAPLVSDFVLLDCDVKN-EFVLGHPFTPLQQLMAVLPPQSSWCLP 518
Query: 533 EHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTE 592
+ LM +SPI DFYP F+VD+ G +W+G +PFID +L ++ + +L E
Sbjct: 519 KMMCDLMNSDDSPILDFYPKKFKVDLEGGTTAWKGHVLIPFIDAHKLKKCLRNVNDSLNE 578
Query: 593 EEARRNSIMADMLF 606
EE +RNS L+
Sbjct: 579 EEKQRNSFGVTFLY 592
>gi|413921161|gb|AFW61093.1| hypothetical protein ZEAMMB73_651968 [Zea mays]
Length = 480
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 137/207 (66%), Positives = 157/207 (75%), Gaps = 9/207 (4%)
Query: 558 MNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASI 617
MNGKR+SWQGIAKLPFI+E RLL E+KK+E TLT EEARRNS M +MLFV +H LS I
Sbjct: 1 MNGKRFSWQGIAKLPFIEEDRLLAEIKKVEDTLTPEEARRNSTMCNMLFVNGAHSLSPYI 60
Query: 618 YTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSPVASMEDIMGNQ 677
Y+L+ L K+R +KE+L+P S GMNGYI+ C GDP PPVFRSPV +EDIM NQ
Sbjct: 61 YSLNSKFGHLPDKDRGAIKEKLDPSASGGMNGYIALCGGDPSPPVFRSPVDGLEDIMDNQ 120
Query: 678 VLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKPAPVLWHEDSGRRPHEN-------- 729
V+C+IYKLPD HKH+ RPPAGVI PKK V+ DLKP PVLWHEDSGRRPH+N
Sbjct: 121 VICSIYKLPDPHKHIARPPAGVIIPKKSVEAGDLKPPPVLWHEDSGRRPHDNNHRRPYDN 180
Query: 730 -GRHNPHGTISGRQLGEAAHRLVANSL 755
R NP G +SGRQLGEAAHRLV NSL
Sbjct: 181 SNRQNPSGALSGRQLGEAAHRLVVNSL 207
>gi|358340790|dbj|GAA27297.2| 5'-3' exoribonuclease 1 [Clonorchis sinensis]
Length = 1804
Score = 283 bits (724), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 190/626 (30%), Positives = 293/626 (46%), Gaps = 76/626 (12%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
M QQR+RRF+++++A + A+ ++ Q + ++FD VI+PGTEFM L
Sbjct: 32 MTQQRARRFQSAQEARKTKADAQKRGQ-----------ATSVELFDPCVISPGTEFMERL 80
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+ ++ + N + W+ + +ILS + PGEGEHKI Y+ +R+ P Y PN R+C+Y
Sbjct: 81 HNVLKEFVKEQANQNEAWKHVDIILSGHDCPGEGEHKIREYMSFKRHQPDYCPNERYCIY 140
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G+DADLI L L THE++ ILRE V
Sbjct: 141 GMDADLIFLGLTTHELNMCILRENVV---------------------------------- 166
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFR-IPNP-PFEIDLECIVDDFIFMCFFVGNDFL 238
K V + P+ ++ LREY+D EF + N PF DLE IVDD+IFM F +GNDF+
Sbjct: 167 KTKTCVAEQLPFCVTYLSVLREYIDCEFEALKNSLPFPYDLERIVDDWIFMAFLLGNDFI 226
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 298
PH+P L I ++ +L Y L GYL + + +L+R +I+ + +E F++R
Sbjct: 227 PHIPNLHIHAESLLVLWDTYHVVLPQLDGYLVEYGRLNLQRFHRYIEELSKFEQSWFEER 286
Query: 299 ARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSE--- 355
H+ R KR AR + A V+ + P P P + E
Sbjct: 287 EADHRWM--RGKRGAQMARELATLGDGAGSTEQHQVNNTSKEPPSGSPDPKPRKSIENEL 344
Query: 356 -CVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVE-AENSFETDPQENKEEFKAKLKELLR 413
+ L + H + I ++ ++ ET PQ + + + L
Sbjct: 345 SSLTALTSLFAADDLFHGEFLDETEELIAEGVISHIPSAQETKPQNDLIASQLVDADQLL 404
Query: 414 DKSDAFNSDNP-EEDKVKLGEPGWKERYYEEKFNAKTPEEREETRK--DVVLRYTEGLCW 470
S +F D D+ +L + YY K + E E R+ +V Y L W
Sbjct: 405 SSSSSFEDDAELLSDEDELVYRMHRRDYYWTKLSIPVGSEEELKRRLMPLVTDYVRMLQW 464
Query: 471 VMHYYYEGVCSWQWFYPYHYAPFASDL------------------KDLDQFNISFELGHP 512
++ YY+ V W ++Y YHYAPFA DL +DL F+ P
Sbjct: 465 ILSYYFLRVADWNFYYAYHYAPFACDLMLYTAQFANSQLGSSSDNEDLSWTKFDFD-SQP 523
Query: 513 FKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLP 572
PF Q + + P+ ++ +P+ +R LMT +SP++ F+P F D+NGK SW+ + +P
Sbjct: 524 VLPFVQQMMIMPADGAYIVPQVFRSLMTSSDSPLAPFFPETFATDINGKIASWEAVVLIP 583
Query: 573 FIDEARLLDEVKKIEHTLTEEEARRN 598
FIDE LL ++ + LT E +RN
Sbjct: 584 FIDETILLKAMEPLNKGLTAAEQKRN 609
>gi|298713655|emb|CBJ33698.1| putative 5\'-3\' exoribonuclease (XRN3) [Ectocarpus siliculosus]
Length = 708
Score = 282 bits (722), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 161/309 (52%), Positives = 205/309 (66%), Gaps = 16/309 (5%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR++++A ++A E RQ + G K+PPK+ +DSN+ITPGTEFM L
Sbjct: 111 MNQQRSRRFRSAQEAEEAAELMEETRQAMKEMGVKVPPKA-KPAWDSNIITPGTEFMHKL 169
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S L++Y+ R+N D W+ IKVILSDA+ PGEGEHKIM +VR QR PGYDPN H L+
Sbjct: 170 SRYLRFYVQDRVNRDKAWQNIKVILSDASEPGEGEHKIMDFVRRQRTQPGYDPNQHHILH 229
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQD-----KCFLCGQPGHLAANCEGKAKR-K 174
GLDADLIML LATHE F+ILRE V QQ K A KAKR +
Sbjct: 230 GLDADLIMLGLATHERSFTILREQVLFGRQQKEASERKAAAMNAARDALAGVGQKAKRGE 289
Query: 175 AGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFR-IPNP---PFEIDLECIVDDFIFMC 230
GE D GD V P KP Q L +WTLREYL+ EF+ + P PF D E +VDDF+F+C
Sbjct: 290 HGEHD--GD--VSPHKPLQMLQLWTLREYLENEFKELEAPGRVPFGYDFERVVDDFVFLC 345
Query: 231 FFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLT-DGSKPSLRRVEHFIQAVGS 289
FFVGNDFLPH+P+L IR+GA++ L VYK+ +LG YLT G + +L++V+ + VG
Sbjct: 346 FFVGNDFLPHLPSLGIRDGALDYLFNVYKRVISSLGDYLTASGGRVNLKQVDVIMSEVGE 405
Query: 290 YEDRIFQKR 298
ED +F++R
Sbjct: 406 IEDEVFKRR 414
Score = 90.5 bits (223), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 63/102 (61%), Gaps = 7/102 (6%)
Query: 401 KEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDV 460
K++ K + + LL + D+ N D V+L E GWK+RYY +K + E R+ +
Sbjct: 614 KDKVKDQTQVLLDEARDSVN------DTVRLWEDGWKDRYYHDKCKLEDIEG-GGGRERL 666
Query: 461 VLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQ 502
Y EGLCWVM YYY+G SW W++P+HYAPFASDL + D+
Sbjct: 667 FQTYVEGLCWVMLYYYQGCPSWTWYFPFHYAPFASDLINCDR 708
>gi|365987598|ref|XP_003670630.1| hypothetical protein NDAI_0F00680 [Naumovozyma dairenensis CBS 421]
gi|343769401|emb|CCD25387.1| hypothetical protein NDAI_0F00680 [Naumovozyma dairenensis CBS 421]
Length = 1034
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 148/322 (45%), Positives = 202/322 (62%), Gaps = 13/322 (4%)
Query: 1 MNQQRSRRFRASKDA-ADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAV 59
MNQQR+RRFR+++DA ++ A EE LRQ+ E + + +DSN ITPGT FM
Sbjct: 110 MNQQRARRFRSARDAQIENEAREEILRQKEEIGEMIDDAVKNKKTWDSNAITPGTPFMDK 169
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
L+ AL+Y+ +L DPGW+ ++VI+SDA VPGEGEHKIM+++R QR P Y+PNT HC+
Sbjct: 170 LAAALRYWTAFKLATDPGWKSLQVIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCI 229
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
YGLDADLI L LATHE HF ILRE VF + + G + N + KR E D
Sbjct: 230 YGLDADLIFLGLATHEPHFKILREDVFAQDNRRR----GNTLADSINMSEEEKRLIQEQD 285
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
+KP+ +LHI TLR+YL E IP PF DLE +DD++FMCFF GNDFLP
Sbjct: 286 --------AQKPFLWLHISTLRDYLSAELWIPRLPFPFDLERAIDDWVFMCFFCGNDFLP 337
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P L++RE +I++L+ ++K L Y+T + +L VE ++ +GS E IF+ R
Sbjct: 338 HLPCLDVRENSIDILLDIWKVVLPNLKTYMTCDGELNLESVEMLLKQLGSRESDIFKTRH 397
Query: 300 RLHQRHAERIKREKAQARRGDD 321
R E I+R K Q + G++
Sbjct: 398 IQEIRKQESIQRRKLQRQNGNN 419
Score = 209 bits (531), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 121/305 (39%), Positives = 171/305 (56%), Gaps = 21/305 (6%)
Query: 415 KSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 474
KS ++D + V+L EPG++ERYY+ K + E+ E RK +V Y EG+ WV+ Y
Sbjct: 587 KSGVIDTD----EAVRLFEPGYRERYYKAKCYV-SDEDIESLRKGMVKSYIEGVSWVLLY 641
Query: 475 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEH 534
YY+G SW W+YPYHYAPFA D + ++ FELG PF PF QL+ V P+AS H LP
Sbjct: 642 YYQGCASWNWYYPYHYAPFAQDFFGITDMDVKFELGEPFLPFEQLMSVLPAASGHTLPSI 701
Query: 535 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 594
+R LM++P+SPI DFYP +F +DMNGK+ SWQGI+ LPFIDE RLL V++ LT+ E
Sbjct: 702 FRPLMSEPDSPIIDFYPAEFPIDMNGKKMSWQGISLLPFIDEKRLLKTVREQYPKLTDYE 761
Query: 595 ARRNSIMADMLFVLLSHPLSASIYTLDEHCKQL--KIKERVEVKERLNPELSDGMNGYI- 651
RN +L + S ++ K+L + ++E E L G++G +
Sbjct: 762 KSRNVRKEAVLLI------SNKNANYEKFTKKLYKSVDGKIETAELLFHHFKSGLSGIVC 815
Query: 652 SPCAGDPHPPVFRSPV--ASMEDIMGNQVLCAIYK---LPDAHKHVTRPPAGVIFPKKIV 706
+ G PV S+ D+ N +L YK LP +K V G I P++++
Sbjct: 816 TDSEGFTLGSKILCPVQGGSLPDLSTNSLLKMTYKLLPLPSRNKSVIL--NGYIPPERVL 873
Query: 707 QLEDL 711
DL
Sbjct: 874 NQYDL 878
>gi|449019490|dbj|BAM82892.1| 5'->3' exoribonuclease [Cyanidioschyzon merolae strain 10D]
Length = 1363
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 187/452 (41%), Positives = 252/452 (55%), Gaps = 35/452 (7%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
+NQQR+RRFRA+K+A + EEE+LR + +G ++PPK + FDSNVITPGT FM L
Sbjct: 122 INQQRTRRFRAAKEAREKTEEEEKLRALWREQGLRVPPKP-KKPFDSNVITPGTLFMERL 180
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
++AL+ YI R+ + P W + VILSDA+VPGEGEHKI ++R QR PGYDP TRH LY
Sbjct: 181 AVALRRYIRERIRSCPAWRSLVVILSDASVPGEGEHKIAEFIRTQRAQPGYDPETRHVLY 240
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEG-KAKRKAGEFD 179
GLDADLIMLALATHE HF ILRE ++ + DK + + G + K G
Sbjct: 241 GLDADLIMLALATHEPHFFILRERIYFDSRADKAIQAVKAMNAQQTPAGDRIDHKTGT-- 298
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFR-------IPNPPFEIDLECIVDDFIFMCFF 232
G + +P++P+ F I LREYL EFR + P +D+E +DDF+F+CFF
Sbjct: 299 SAGPGLPLPERPFDFFRIDRLREYLQAEFRDALQHDAVRQPREPLDVEIALDDFVFLCFF 358
Query: 233 VGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDG-SKPSLRRVEHFIQAVGSYE 291
VGNDFLPH+P+LEIREGAI+ L+ VYK +F+ + G+LTDG RV ++ V E
Sbjct: 359 VGNDFLPHLPSLEIREGAIDFLLEVYKYKFQRI-GHLTDGHGGIHFDRVRELLRDVAHVE 417
Query: 292 DRIFQKRARLH-------QRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLAS 344
D +F++RAR +HA + A R V ++ V S A
Sbjct: 418 DSVFRERARAAGEPPTPVSQHAAVVSGASTAAARTHTVPEVSAKKESVSASTLSIKADAE 477
Query: 345 GPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDP------Q 398
P PSP V LD G PH+ R +S A EA+ P +
Sbjct: 478 TP-PSPGVH---VDELDAGVSA---PHRQKRHASEQHQKRAATEADPGLGLVPLPRKHVK 530
Query: 399 ENKEEFKAKLKELLRDKSDAFNSDNPEEDKVK 430
EN+ K+L +S+A S+ E DK++
Sbjct: 531 ENRATSLRDWKQLEHHRSEAAVSN--EIDKIE 560
Score = 176 bits (445), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 86/187 (45%), Positives = 118/187 (63%), Gaps = 7/187 (3%)
Query: 407 KLKELLRDKSDAFNSDNP-EEDKVKLGEPGWKERYYEEKFNAKTPEERE---ETRKDVVL 462
+ + +LR++ + P EED V+ PGW+ERYY+ KF P + E + + +
Sbjct: 783 QFEHILRERLKQRQTRPPTEEDPVRFHLPGWRERYYQSKFPHWPPLDTEAGAQALQRLCR 842
Query: 463 RYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKD--LDQFNISFELGHPFKPFNQLL 520
Y EGL WV YYY G SW WFYPYHYAP ASDL +DQ +I FE G PF P QL+
Sbjct: 843 AYYEGLLWVYRYYYAGCPSWGWFYPYHYAPLASDLAQCCVDQKDIVFERGAPFTPLEQLM 902
Query: 521 GVFPSAS-SHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARL 579
V P++S + LP +LM +P+SPI ++YPTDF +D NGKR++WQG+A LPF+DE RL
Sbjct: 903 AVLPASSGAQCLPRILYELMINPHSPIIEYYPTDFAIDYNGKRFAWQGVALLPFVDEQRL 962
Query: 580 LDEVKKI 586
++ +
Sbjct: 963 RLAIQSV 969
>gi|242067311|ref|XP_002448932.1| hypothetical protein SORBIDRAFT_05g001880 [Sorghum bicolor]
gi|241934775|gb|EES07920.1| hypothetical protein SORBIDRAFT_05g001880 [Sorghum bicolor]
Length = 712
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 149/330 (45%), Positives = 197/330 (59%), Gaps = 62/330 (18%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MN+ R RF +++ A E+ +R+E +G++ P+ S+V D NVITPGTEFM L
Sbjct: 67 MNRVRRGRFHSARMATSEEIEDYEMRKELRAQGKEETPQEISEVSDPNVITPGTEFMEKL 126
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S AL+YYI R N+DP W I VILSDANVPGEGEHKIMS+VR Q N+ GYDPNTRHCL+
Sbjct: 127 SQALEYYIRGRFNSDPWWRDIMVILSDANVPGEGEHKIMSFVRAQGNMEGYDPNTRHCLF 186
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIMLALA+HEVHFSILRE
Sbjct: 187 GHDADLIMLALASHEVHFSILRE------------------------------------- 209
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
FL+IW LREYL+ EF+I +P E D+E ++DDFIF+CF +GNDF+PH
Sbjct: 210 -------------FLNIWVLREYLEIEFKILDPVCEPDIERLIDDFIFICFLMGNDFIPH 256
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLT--------DGSKPSLRRVEHFIQAVGSYED 292
+P+LE EGA++LL+ VYK F +GGY+ +G+ + R+E F + YE+
Sbjct: 257 IPSLETHEGAVDLLIEVYKTTFNKMGGYIINTDKVKDKNGAYLEVSRLEIFFHELSMYEE 316
Query: 293 RIFQKRARLHQ----RHAERIKREKAQARR 318
+IF KR +L Q + + RE +++ R
Sbjct: 317 KIFLKRYKLEQDLLLKTYHEMLREASESER 346
Score = 165 bits (418), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/330 (31%), Positives = 154/330 (46%), Gaps = 64/330 (19%)
Query: 398 QENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETR 457
+ + E + KL +LL FN + P D+++LG PGWK R++ E F A+T E + +
Sbjct: 343 ESERPELRQKLDDLL------FNEERPY-DRIRLGLPGWKSRFFREYFGAETSNEIGKLQ 395
Query: 458 KDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFN 517
D+ +Y EGLCWV+ Y+ V SW W+YP++ APF SDLK L + +ISF + P +PF+
Sbjct: 396 NDMAQKYLEGLCWVLQCYFADVPSWSWYYPFYVAPFVSDLKGLSRVDISFTVDKPLRPFD 455
Query: 518 QLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEA 577
QL+ V P S ALP+ Y+++M +F E D G+ + W GI+ E
Sbjct: 456 QLMAVLPMQSWCALPKCYKEMMGR-----KEFDYPRLEHDTKGRHFLWNGIS------EE 504
Query: 578 RLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKE 637
LL K ++ LT E+RRN+
Sbjct: 505 LLLSATKVVDKKLTTHESRRNT-------------------------------------- 526
Query: 638 RLNPELSDGMNGYISPCAGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPP 696
+ G+ G+I+P D F SP +++DI +Q + + P+A V R
Sbjct: 527 ------TSGIGGWIAPDDNDGFSDGSFHSPTTNLQDITSDQTISGTFFNPEAANPVPRLL 580
Query: 697 AGVIFPKKIVQLEDLKPAPVLWHEDSGRRP 726
V P K V D+ P LWH G RP
Sbjct: 581 RNVSVPDKTVTGADISKRP-LWHTYPGSRP 609
>gi|396493104|ref|XP_003843954.1| hypothetical protein LEMA_P016050.1 [Leptosphaeria maculans JN3]
gi|312220534|emb|CBY00475.1| hypothetical protein LEMA_P016050.1 [Leptosphaeria maculans JN3]
Length = 1096
Score = 279 bits (714), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 143/320 (44%), Positives = 202/320 (63%), Gaps = 28/320 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEF--EREGRKLPPKSDSQV----FDSNVITPGT 54
MNQQRSRRFR++++AA+ E ++ ++ R S QV +DSN ITPGT
Sbjct: 111 MNQQRSRRFRSAREAAEKDVERAEFQKVLTAQKASRGEDVTSLEQVVEKTWDSNAITPGT 170
Query: 55 EFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPN 114
FM +L+ +LQY+ + DP W+ +KVI+SD++VPGEGEHKIM+++R QR++P +DPN
Sbjct: 171 PFMHLLAESLQYWCAYKFTTDPSWKDMKVIISDSSVPGEGEHKIMNFIRSQRSMPTHDPN 230
Query: 115 TRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKR 173
T H +YGLDADLIML+LATHE HF +LRE VF +DK C CG+ GH+ NC
Sbjct: 231 TSHVIYGLDADLIMLSLATHEPHFRVLREDVFYDSGKDKTCTRCGRKGHIRNNC------ 284
Query: 174 KAGEFDEKGDEVVVPK------------KPYQFLHIWTLREYLDYEFRIPNPPFEIDLEC 221
EF + G ++ + KP+ +LH LREYL E P F+ DLE
Sbjct: 285 ---EFPDDGKKLTEEEAAEEWANSEHQLKPFIWLHTNILREYLAVEMDTPKRKFKYDLER 341
Query: 222 IVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVE 281
+DD++FMCFFVGNDFLPH+P+LEIR+ I+LL+++++ + Y+T P +RRV+
Sbjct: 342 SLDDWVFMCFFVGNDFLPHLPSLEIRDQGIDLLISIWRDLAAEMDDYVTKDGFPDMRRVQ 401
Query: 282 HFIQAVGSYEDRIFQKRARL 301
+ A+ S E IF+KR +
Sbjct: 402 QILSALASREADIFKKRKEV 421
Score = 197 bits (501), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 94/190 (49%), Positives = 130/190 (68%), Gaps = 6/190 (3%)
Query: 420 NSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGV 479
N+D ED +KL EPG++ERYYE+KF+ + R V +Y EGLCWV+ YY +G
Sbjct: 575 NADETPEDTIKLWEPGYEERYYEQKFHVDPNDI--AFRNKVARQYAEGLCWVLAYYMQGC 632
Query: 480 CSWQWFYPYHYAPFASD---LKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYR 536
SW W++P+HYAPFA+D L+D+D + FE G F P+ QL+GV P+AS+HA+PE +R
Sbjct: 633 PSWTWYFPHHYAPFAADFVGLEDMDPRKL-FEKGTVFHPYEQLMGVLPAASNHAIPEPFR 691
Query: 537 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 596
LM+D +SPI DFYP DF +D+NGK+++WQG+A LPFIDE RLL + LT++E +
Sbjct: 692 PLMSDADSPIIDFYPVDFPIDLNGKKFAWQGVAILPFIDEKRLLAAMATKYPELTDDERK 751
Query: 597 RNSIMADMLF 606
RN + L
Sbjct: 752 RNEFGKETLM 761
>gi|430813360|emb|CCJ29283.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 741
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 140/300 (46%), Positives = 186/300 (62%), Gaps = 38/300 (12%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQ-VFDSNVITPGTEFMAV 59
MNQQRSRRFRA++DA A++ E + + G+ + + + +DSNVITPGT FM
Sbjct: 88 MNQQRSRRFRAAQDAEKKASDLEEFLKLLKASGKSIDETLEKKKAWDSNVITPGTPFMDA 147
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
L+ +L+Y+I ++N+D W+ +KVI+SDA+VPGEGEHKIM ++R QR PGYDPNT+H +
Sbjct: 148 LAKSLRYWIIYKINSDVAWKNLKVIVSDASVPGEGEHKIMEFIRSQRCSPGYDPNTQHVI 207
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKRKAGEF 178
YGLDADLIML LATHE HF +LRE VF K C +CGQ GH A C
Sbjct: 208 YGLDADLIMLGLATHEPHFRVLREDVFFQDANSKGCHICGQIGHFAKECT---------- 257
Query: 179 DEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFL 238
+ E IPN F+ DLE +DD++ +CFFVGNDFL
Sbjct: 258 --------------------------EAELNIPNTSFQFDLERAIDDWVCLCFFVGNDFL 291
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 298
PH+P+L+I EGAI L ++K++ +GGYLT K L+R E +QA+G ED IF+KR
Sbjct: 292 PHLPSLDIHEGAIETLGNIWKEKLHEMGGYLTMDGKIDLKRAEIILQALGQQEDHIFRKR 351
Score = 173 bits (439), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 98/239 (41%), Positives = 144/239 (60%), Gaps = 13/239 (5%)
Query: 478 GVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRK 537
G SW+W+YPYHYAPFASD K++ NI FELG PF P+ QL+GV PSAS LP +
Sbjct: 469 GCPSWKWYYPYHYAPFASDFKNISSLNIQFELGKPFLPYEQLMGVLPSAS---LPRPLQS 525
Query: 538 LMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARR 597
LM + +S I DFYP +F +DMNGK++SWQG+ LPFIDE RLL ++K+ L+EEE R
Sbjct: 526 LMIEEHSEIIDFYPKEFPIDMNGKKFSWQGVVLLPFIDEKRLLKAIEKVYPQLSEEEKSR 585
Query: 598 NSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAG- 656
N+I D LF+ + L ++ C + K E+ +LN +LS+G++G +
Sbjct: 586 NTIGNDTLFISEGNALYDNLIL--SLCSKKKDSEK---SIKLNTKLSNGLSGIVLQDENW 640
Query: 657 DPHPPVFRSPV--ASMEDIMGNQVLCAIYKLP-DAHKHVTRPPAGVIFPKKIVQLEDLK 712
P+ +F SP+ S D+ ++ L IYK+ ++ H + GV K+ + + D++
Sbjct: 641 IPNSTIF-SPLTKVSFPDVENDRSLSLIYKISKSSNIHKSMLLRGVKLNKRHLDINDIR 698
>gi|254579256|ref|XP_002495614.1| ZYRO0B15642p [Zygosaccharomyces rouxii]
gi|238938504|emb|CAR26681.1| ZYRO0B15642p [Zygosaccharomyces rouxii]
Length = 1012
Score = 277 bits (708), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 146/327 (44%), Positives = 199/327 (60%), Gaps = 16/327 (4%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQ-VFDSNVITPGTEFMAV 59
MNQQR+RRFR++KDA ER+ QE E+ G + ++ +DSN ITPGT FM
Sbjct: 110 MNQQRARRFRSAKDAQIENENRERIMQEREQLGEIIDGAVKTKKTWDSNAITPGTPFMDK 169
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
L+ AL+Y+ +L DPGW+ ++VI+SDA VPGEGEHKIM++VR QR Y+PNT HC+
Sbjct: 170 LAAALRYWCSFKLATDPGWKNLQVIISDATVPGEGEHKIMNFVRSQRADAQYNPNTTHCI 229
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
YGLDADLI L LATHE HF +LRE VF G + L + N + K+ + D
Sbjct: 230 YGLDADLIFLGLATHEPHFKVLREDVFAQGNNKRHNLKD-----SLNMSEEEKQMIAKQD 284
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
+KP+ +LHI LREYL E +P PF DLE +DD++FMCFF GNDFLP
Sbjct: 285 S--------EKPFLWLHISVLREYLSAELWVPRMPFPFDLERAIDDWVFMCFFCGNDFLP 336
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P L++RE +I++L+ ++K + Y+T + +L VE + +GS E IF+ R
Sbjct: 337 HLPCLDVRENSIDILLDIWKVVLPTMKTYITCDGELNLESVEKLLSQLGSREADIFKTRH 396
Query: 300 RLHQRHAERIKREKAQ--ARRGDDVEP 324
R E +R+KAQ +G D P
Sbjct: 397 IQEVRKQENFERKKAQRNVSKGQDRHP 423
Score = 199 bits (505), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 94/179 (52%), Positives = 117/179 (65%), Gaps = 1/179 (0%)
Query: 429 VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPY 488
VKL EPG+ ERYY EKF+ +P + RKD+V Y EG+ WV+ YYY+G SW W+YPY
Sbjct: 609 VKLHEPGYHERYYTEKFHI-SPNHIDALRKDLVKCYIEGVSWVLLYYYQGCASWTWYYPY 667
Query: 489 HYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISD 548
HYAP A+D + F G PF P+ QL+ V P+AS H LP +R LM+ P+S I D
Sbjct: 668 HYAPLAADFFGFSDIKVEFPPGKPFLPYEQLMSVLPAASGHTLPPIFRPLMSSPDSEIID 727
Query: 549 FYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
FYPT+F VDMNGK+ WQGIA LPFIDE RLL V+ LTEEE RN + +L +
Sbjct: 728 FYPTEFPVDMNGKKMPWQGIALLPFIDEKRLLQVVRAQYSKLTEEEKSRNVVRNPILLI 786
>gi|403367227|gb|EJY83428.1| 5'-3' exonuclease [Oxytricha trifallax]
Length = 1484
Score = 276 bits (706), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 185/633 (29%), Positives = 312/633 (49%), Gaps = 97/633 (15%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR++K+A +S E+LRQE G++ P ++FD+N I+PGT+FM L
Sbjct: 99 MNQQRARRFRSAKEAFES---REQLRQE----GKEAP-----ELFDTNAISPGTQFMFEL 146
Query: 61 SIALQYYIHLRLNNDPGWEKI-KVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
L +++ + N DP ++ + +VI+SD ++PGEGEHK+M ++R + P YDPNTRHC
Sbjct: 147 CKQLHFFVQYKTNVDPLYQNLAQVIVSDGSIPGEGEHKMMDFIRQAKQSPQYDPNTRHCF 206
Query: 120 YGLDADLIMLALATHEVHFSILREV-VFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEF 178
YG DADLIML+L THE HF I+RE +F +Q G +R
Sbjct: 207 YGADADLIMLSLLTHEPHFIIIREEHIFKKSKQ-----------------GGVQR----I 245
Query: 179 DEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEI--DLECIVDDFIFMCFFVGND 236
D+K + +Q ++I LREY + E++ +I DLE I+DDF+F CFF+GND
Sbjct: 246 DKKK------QVNFQIVYINLLREYFELEYKPLQSQMKIQFDLERIIDDFVFFCFFIGND 299
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP + L+I EG+++ L+ +Y+K + Y+T+ R + FI+ +G +E F
Sbjct: 300 FLPSLSALDISEGSLDQLIKLYRKLLPQMDNYITESGTIYWDRAQPFIKMLGEHEHESFI 359
Query: 297 KRARLHQRHAERIKREKA------------QARRGDD--VEPLAQPDSLVPVSRFHGSRL 342
+R ++ E++ Q G D ++ + L+ V R+
Sbjct: 360 ERVNQMRQRGGGRGGEQSIVSSSVREVQTTQTFIGKDGKIDRKREIQRLIQVKIQDKKRM 419
Query: 343 ASGPSPSPYQQSECVGRLDNGKGTSGRPH-KVPRLSSGATIGAAIVEAENSFETDPQE-- 399
+ + K + ++ +L + E N E D +E
Sbjct: 420 KIVSMIEKKKDKSYKKYITIKKYQEDKDQDEIEKLKVLEKYQRKLWEQNNGSEEDKEEFQ 479
Query: 400 -NKEEFKAKLKELLRDKSDAFNSDNPE----EDKVKLGEPGWKERYYEEKFNAKTPEERE 454
++++ +L L++D D+F+ +P +D + E + +EK + + +
Sbjct: 480 FDRDQDIIQLLNLIKD--DSFSELDPNDILTDDISDVDESQINLQQLDEKIQKQNAQINK 537
Query: 455 ETRKDVVLRYTEGLCWVMHYYYE------------GVCSWQWFYPYHYAPFASDL----- 497
++D++ +Y E M + + G W+W+YPYHYAP SD+
Sbjct: 538 APQQDLIEKYMEMNMEFMKKFIKLYKIDPFSAKAIGAQHWRWYYPYHYAPMISDIDEDIV 597
Query: 498 -------KDLDQFNISFELGH---PFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPIS 547
K + F I H P++PF QLL + P+ S LP+ Y +++ +
Sbjct: 598 ENYLKGSKVIGDFEIDENCSHINEPYRPFFQLLCILPAKSVKLLPQQYSEIIL---GVLR 654
Query: 548 DFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLL 580
++P DF +D+NG+ W+ + +PF++E+ +
Sbjct: 655 KYFPDDFTIDLNGRSLPWEAVCLIPFVEESLFI 687
>gi|393910356|gb|EFO19268.2| hypothetical protein LOAG_09226 [Loa loa]
Length = 1318
Score = 276 bits (706), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 179/522 (34%), Positives = 253/522 (48%), Gaps = 69/522 (13%)
Query: 99 MSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCG 158
M ++R +R+ YD NTRHCLYGLDADLIML + +HE HF++LRE V Q+
Sbjct: 1 MDFIRSERSRSDYDANTRHCLYGLDADLIMLGICSHEPHFALLREEVKFGRQR------- 53
Query: 159 QPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNP--PFE 216
N GK K E + LH+ LREYL +EF PFE
Sbjct: 54 -------NHNGKHKTGVNEI------------TFHLLHLSLLREYLSWEFHSLKEKLPFE 94
Query: 217 IDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPS 276
DLE ++DD++ M F VGNDF+PH+P + I E A+ LL A Y + L GY+ + +
Sbjct: 95 YDLESVIDDWVLMGFLVGNDFIPHLPHVHIHEDALPLLYATYNEVLPQLDGYINEAGVLN 154
Query: 277 LRRVEHFIQAVGSYEDRIFQKR----ARLHQRHAERIKRE--KAQARRGDDVEPLAQPDS 330
L+R E F++ + + F ++ A L + ++ Q +D+EP
Sbjct: 155 LKRFEIFLKNFAKNDRKNFIEQMDDEAYLSSKRISNAWKKGPNDQQNCDEDLEPFD---- 210
Query: 331 LVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKV--PRLSSGATIGAAIVE 388
L+ ++ G D+ S ++ PR+ + AA
Sbjct: 211 -----------LSDAEKTEITEKDSRKGAFDSDSNASDECEEIAGPRI-----LTAAKRM 254
Query: 389 AENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEED-KVKLGEPGWKERYYEEKF-- 445
F D + + A LL D+S + D V K YY +K
Sbjct: 255 THGYFGLDKDSDNDLPIA----LLDDESYENDYDQSSWTPVVSRAFKNHKRDYYNDKMKY 310
Query: 446 -NAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFN 504
N E RE+ Y + W +HYYY G CSW WFYP+HYAP+ SD+ D +
Sbjct: 311 SNISKEELREQAEG-----YIRAIQWNLHYYYHGCCSWSWFYPHHYAPYISDVSDFAEME 365
Query: 505 ISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYS 564
++F+L PFKPF QLL V P+AS+ LP YR+LM+DP SPI DFYP F+ D+NGK+
Sbjct: 366 MNFDLSEPFKPFEQLLAVLPAASADCLPLPYRELMSDPKSPIIDFYPEQFDTDLNGKKND 425
Query: 565 WQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 606
W+ + +PFI E RLL + + LT+EE +RN +LF
Sbjct: 426 WEAVVLIPFIREDRLLQAMAIKDPLLTDEERKRNLHGPHLLF 467
>gi|444322153|ref|XP_004181732.1| hypothetical protein TBLA_0G02750 [Tetrapisispora blattae CBS 6284]
gi|387514777|emb|CCH62213.1| hypothetical protein TBLA_0G02750 [Tetrapisispora blattae CBS 6284]
Length = 1546
Score = 276 bits (706), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 214/692 (30%), Positives = 323/692 (46%), Gaps = 117/692 (16%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA E+ Q+ EG ++P + FDSN ITPGTEFMA L
Sbjct: 96 MNQQRARRFRTAMDA-------EKALQKAIEEGTEIPK---GEPFDSNSITPGTEFMAKL 145
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+IH +++ND W ++++ S VPGEGEHKIM Y+R R+ GY+PNTRHC+Y
Sbjct: 146 TKNLKYFIHDKISNDSNWRNVEIVFSGHEVPGEGEHKIMDYIRTIRSQEGYNPNTRHCIY 205
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLI+L L+TH HF++LRE E K R++G+
Sbjct: 206 GLDADLIILGLSTHAPHFALLRE------------------------EVKFGRRSGQ--- 238
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFL 238
+ + + LH+ LREYL+ EF FE + E ++DDFI + F +GNDFL
Sbjct: 239 ---TPALENQNFFLLHLSLLREYLELEFENIADELQFEYNFERVLDDFILILFVIGNDFL 295
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 298
P++P L + +GA +L+ +K+ L GY+ + K +L+R++ +++ + +E F+++
Sbjct: 296 PNLPDLHLNKGAFPVLLQTFKEALLHLDGYINEFGKINLQRLKIWLEYLTQFELMNFEQK 355
Query: 299 AR-----LHQRHAERIKREKAQARRGDDVEP--------LAQPDSLVPVSRFHGSRLASG 345
Q I+ E+ +AR G + + +P L + +A
Sbjct: 356 DIDVDWFNQQLENISIEGERKRARIGKKLILKQQKKIIGMIKPWILKEMQLKFAPDIADE 415
Query: 346 PSPSPYQQSECV-------GRLDNGKGTSGRPHK----------VPRLSSGATIGAAIVE 388
PS S V D+ + +K + L A IV
Sbjct: 416 EIPSLSLNSSIVLHDLDSDSEEDSENANTKNIYKEKQNEVINQNIDFLKKAAFDLGLIVV 475
Query: 389 AENSFET----------DPQENKEEFKAKLKELLRD----KSDAFNSDNPEEDKVKLGEP 434
NS +T +P E +EE + +L+ + R +S D E D+
Sbjct: 476 HSNSTDTYSLRIDVDAINPNETEEEHEERLQSIRRMLKTYQSSILVDDQSELDR------ 529
Query: 435 GWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHY---- 490
+++ YE++F K E + + EG + + V QW Y+Y
Sbjct: 530 --EQQVYEDRF-KKWKNEYYKDKLQFTTNTDEGKQQLKKLSCDYVEGLQWVLFYYYKGCQ 586
Query: 491 ----------APFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMT 540
+P SDL I FE PF PF QL+ V P S + +P R LM
Sbjct: 587 SWSWYYPHHYSPRISDLILGLHQVIDFEKSVPFTPFQQLMAVLPERSKNLIPVCLRPLMY 646
Query: 541 DPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSI 600
+ NS I DFYP + ++D NGK W+ + L FIDE RL+D ++ L+ EE RNS
Sbjct: 647 EENSKIIDFYPHEVKLDKNGKTAEWEAVVLLSFIDEKRLIDAMEPYLSKLSPEEKIRNSF 706
Query: 601 MADMLFV-------LLSHPLSASIYTLD-EHC 624
++ F + PLS L+ HC
Sbjct: 707 GRNLTFTFNPQIDEVYKSPLSGIFKDLEHNHC 738
>gi|413918977|gb|AFW58909.1| hypothetical protein ZEAMMB73_438738 [Zea mays]
Length = 795
Score = 275 bits (704), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 147/311 (47%), Positives = 194/311 (62%), Gaps = 56/311 (18%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MN+ R RF ++ ERL +E PP+ S+V D NVI+PGTEFM +
Sbjct: 105 MNRIRRGRFHSAM---------ERLAEE--------PPREISEVSDPNVISPGTEFMEKV 147
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S AL+YYI R N+DP W I VILSDA+VPGEGEHKIMS++R Q ++ GYDPNTRHCL+
Sbjct: 148 SEALEYYIRARFNSDPWWRDIMVILSDASVPGEGEHKIMSFIRAQCSMEGYDPNTRHCLF 207
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLIMLALA+HEV+FSILRE V Q++ EG
Sbjct: 208 GHDADLIMLALASHEVYFSILREDVLYQNQEET--------------EGN---------- 243
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
PKK + FL++W LREYL+ EF+I +P E D+E ++DDFIF+CF +GNDF+PH
Sbjct: 244 -------PKKSFLFLNMWVLREYLEIEFKILDPVCETDIERLIDDFIFICFLMGNDFIPH 296
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTD--------GSKPSLRRVEHFIQAVGSYED 292
+P+L+ +EGA++LL+ VYK F +GGY+T+ G+ + R+E F + YED
Sbjct: 297 IPSLKTQEGAVDLLIEVYKTTFNKMGGYITNTDKVKDKYGAYLEVSRLETFFHELSMYED 356
Query: 293 RIFQKRARLHQ 303
+IF KR L Q
Sbjct: 357 KIFLKRYDLKQ 367
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/331 (34%), Positives = 167/331 (50%), Gaps = 33/331 (9%)
Query: 397 PQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREET 456
P+ + E + KL +LL FN +NP D ++LG PGWK R++ E F AKT E +
Sbjct: 382 PESERPELRQKLDDLL------FNEENPY-DSIRLGLPGWKSRFFREHFGAKTSSEIGKL 434
Query: 457 RKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPF 516
+ D+ +Y EGLCWV+ Y+ V SW W+YP++ APF SDLK L + ISF + P +PF
Sbjct: 435 QNDMAQKYLEGLCWVLQCYFADVPSWSWYYPFYVAPFVSDLKGLSRIEISFTVDKPLRPF 494
Query: 517 NQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDE 576
+QL+ V P S ALP+ Y K P FY +GK + W+GI+ +E
Sbjct: 495 DQLMAVLPMQSWGALPKCYEKKRDTP------FYYPRLVHAKDGKYFLWRGIS-----EE 543
Query: 577 ARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVK 636
RL + ++ LT E+RRN+ + +F+ H S S+ H EV
Sbjct: 544 LRL-SASEMVDRKLTTLESRRNTTRKEKVFL---HRSSNSV----PHNGGSSSLPHNEVT 595
Query: 637 ERLNPELSDGMNGYISPCAGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRP 695
E+ + G+ G+I+P D F SP +++DI +Q + ++ P+A V R
Sbjct: 596 EQ-----ASGIGGWIAPAYNDGFCDGFFPSPTPNLQDITSDQTISGMFFNPEAANPVPRL 650
Query: 696 PAGVIFPKKIVQLEDLKPAPVLWHEDSGRRP 726
V P K V D+ P LWH G RP
Sbjct: 651 LGNVRVPDKTVTGADISKRP-LWHTYPGSRP 680
>gi|403224058|dbj|BAM42188.1| exoribonuclease [Theileria orientalis strain Shintoku]
Length = 1230
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 174/514 (33%), Positives = 265/514 (51%), Gaps = 76/514 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
+NQQRSRRF+++ A E++ +E+ + + +DSNVITPGTEFM L
Sbjct: 114 INQQRSRRFKSAALADLEDETYEKMLKEYLEKKNDMEIPVRKNKWDSNVITPGTEFMYKL 173
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S + YI R+ W +I VI SD+NVPGEGEHKIM ++R QR+ P YDPNT+H L+
Sbjct: 174 SNKIVEYIKERVEKYDAWRRIVVIFSDSNVPGEGEHKIMEFIRSQRHCPDYDPNTKHVLH 233
Query: 121 GLDADLIMLALATHEVHFSILREVV-FTPGQQDKC----FLCGQP---GHLAANCEGKAK 172
G+DADLIML L THE +F ILRE+V F +K F +P LA + +K
Sbjct: 234 GMDADLIMLGLTTHEPNFYILREIVTFYVHPSNKIAPKEFELEEPEGRSALAPKADNMSK 293
Query: 173 RKAGEFDEKGDEVVVPK-KPYQFLHIWTLREYLDYEFRIP---NPPFEIDLECIVDDFIF 228
+EK +++ KP Q L + LREYL ++ R + ID E VDD +
Sbjct: 294 ------EEKYMKMMRENWKPLQLLQLAVLREYLSHQLRFVTGFDNGSSIDFERCVDDLVL 347
Query: 229 MCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVG 288
M FF GNDFLP++P++ I G+I+ ++ +Y+K +L YL++ + + F +
Sbjct: 348 MIFFCGNDFLPNLPSISITGGSIDQMILLYQKLLPSLNDYLSNEGNLNFHSISTFFHYLS 407
Query: 289 SYEDRIFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSP 348
E+ F K+ +++ +E + ++Q
Sbjct: 408 KIENETF-KQIYEYKKKSEEYHKNRSQV-------------------------------- 434
Query: 349 SPYQQSECVGRLDNGKGTSGRP-HKVPRLSSGATIGAAIVEAEN-SFETDPQEN-KEEFK 405
N +GT+ RP ++V +++ G G + EN S D +E+ + ++
Sbjct: 435 -------------NPRGTTHRPENEVTKVTDGGKEG--VFGGENGSVNKDAEEDFMKRYE 479
Query: 406 AKLKELLRDKSDAFNSDNPEEDKVKLGEPG-WKERYYEEKFNAKTPEEREETRKDVVLRY 464
+L +L + D V L +P WKE YY EKF+ ++ +E ++V Y
Sbjct: 480 EELNKLKSVDEVKLSVD------VTLNDPRLWKEAYYREKFHLTEEDDMKEFVQEVSFHY 533
Query: 465 TEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLK 498
+G+CWV+ YYY+G SW W+YPYHY+PF SDL+
Sbjct: 534 IKGICWVLRYYYQGCPSWSWYYPYHYSPFCSDLE 567
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/103 (54%), Positives = 69/103 (66%)
Query: 505 ISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYS 564
I F+ G P PF QL+GV P SSH +PE R LMTDP SP+ DFYP F+ D NGKRY
Sbjct: 728 IKFDYGTPLTPFQQLMGVMPIRSSHCIPESLRGLMTDPESPLRDFYPVKFQEDPNGKRYK 787
Query: 565 WQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
+Q +A LPFIDE +LL VK IE L EEE RN + +++F+
Sbjct: 788 YQWVALLPFIDEEKLLHYVKPIEEKLNEEEKYRNRVSKNIIFL 830
>gi|444315189|ref|XP_004178252.1| hypothetical protein TBLA_0A09480 [Tetrapisispora blattae CBS 6284]
gi|387511291|emb|CCH58733.1| hypothetical protein TBLA_0A09480 [Tetrapisispora blattae CBS 6284]
Length = 1063
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 153/354 (43%), Positives = 212/354 (59%), Gaps = 27/354 (7%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQ-VFDSNVITPGTEFMAV 59
MNQQR+RRFR+++DA+ E + E E+ G + S+ +DSN ITPGT FM
Sbjct: 110 MNQQRARRFRSARDASIENQAREAILNEREKIGEIIDESLKSKKTWDSNAITPGTPFMDK 169
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
L+ AL+Y+I +L D GW+ ++VI+SDA VPGEGEHKIM++VR QR P Y+PNT HC+
Sbjct: 170 LAAALRYWISFKLATDLGWKNLQVIISDATVPGEGEHKIMNFVRAQRGDPEYNPNTTHCI 229
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
YGLDADLI L LATHE HF ILRE VF + K L N + K+ + D
Sbjct: 230 YGLDADLIFLGLATHEPHFKILREDVFAQDNRKKHKLKD-----TMNMTEEEKQLISKQD 284
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
+KP+ +LH+ LREYL E +P PF DLE +DD++FMCFF GNDFLP
Sbjct: 285 S--------EKPFLWLHLSVLREYLSAELFVPRLPFPFDLERAIDDWVFMCFFCGNDFLP 336
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+L++RE +I++L+ ++K L Y+T + L+ VE +Q VGS E IF+ +
Sbjct: 337 HLPSLDVRENSIDILLDIWKTLLPQLKTYMTCDGRLDLKAVELLLQQVGSRESDIFRTKH 396
Query: 300 RLHQRHAERIKRE---KAQARRGDDVEPLAQPDSLVPVSRF-----HGSRLASG 345
R E ++R+ K++ R D + QP L+P + HG+ LA G
Sbjct: 397 IQQVRKKESLQRKNIRKSERRTAKDQD--KQP--LIPTEQLQLYDTHGN-LAKG 445
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/193 (49%), Positives = 120/193 (62%), Gaps = 5/193 (2%)
Query: 415 KSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 474
KS ++D P KL EPG+KERYY KF+ K+ +E E RKD+V Y EG+ WV+ Y
Sbjct: 609 KSGVIDTDKP----TKLYEPGYKERYYVNKFHIKS-DEIEALRKDMVKSYIEGVAWVLLY 663
Query: 475 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEH 534
YY+G SW+WFYPYHYAP SD N+ F PF PF QL+ V P+AS H LP
Sbjct: 664 YYQGCASWEWFYPYHYAPLPSDFYGFSNMNVEFGESEPFLPFEQLMSVLPAASGHTLPAI 723
Query: 535 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 594
+R LM+ P+S I DFYP +F +DMNGK+ +W GIA LPFID RLL V+ LT+ E
Sbjct: 724 FRPLMSSPDSEIIDFYPEEFPIDMNGKKMAWHGIALLPFIDATRLLKVVRDQYPKLTDAE 783
Query: 595 ARRNSIMADMLFV 607
RN +L +
Sbjct: 784 RSRNVRNKPILLI 796
>gi|50293593|ref|XP_449208.1| hypothetical protein [Candida glabrata CBS 138]
gi|74608566|sp|Q6FKN6.3|XRN2_CANGA RecName: Full=5'-3' exoribonuclease 2
gi|49528521|emb|CAG62182.1| unnamed protein product [Candida glabrata]
Length = 1018
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 145/322 (45%), Positives = 202/322 (62%), Gaps = 26/322 (8%)
Query: 1 MNQQRSRRFRASKDA-ADSAAEEERLRQEFEREGRKLPPK-SDSQVFDSNVITPGTEFMA 58
MNQQRSRRFR+++DA ++ A EE +RQ+ E+ G+ + + + +DSN ITPGT FM
Sbjct: 110 MNQQRSRRFRSARDAEIENEAREEIMRQK-EQLGQIIDDSVKNKKTWDSNAITPGTPFMD 168
Query: 59 VLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHC 118
L+IAL+Y+ +L DPGW+ ++VI+SDA VPGEGEHKIM+++R QR P Y+PNT HC
Sbjct: 169 KLAIALRYWTAFKLATDPGWKNLQVIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHC 228
Query: 119 LYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEF 178
+YGLDADLI L LATHE HF ILRE VF + + K
Sbjct: 229 IYGLDADLIFLGLATHEPHFKILREDVFAQDNRKR---------------NNVKDTIDMT 273
Query: 179 DEKGDEVVV--PKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGND 236
DE+ D + +KP+ +LHI LREYL E P PF DLE +DD++FMCFF GND
Sbjct: 274 DEEKDLIRKQDSEKPFLWLHISVLREYLSAELWTPKLPFPFDLERAIDDWVFMCFFCGND 333
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLPH+P L++RE +I++L+ ++K L Y+T K +L VE ++ +G+ E IF+
Sbjct: 334 FLPHLPCLDVRENSIDILLDIWKSILPRLKTYMTCDGKLNLESVEMVLKELGNREGDIFK 393
Query: 297 KRARLHQRHAERIKREKAQARR 318
RH + I++++A RR
Sbjct: 394 T------RHIQEIRKKEANERR 409
Score = 197 bits (502), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/182 (51%), Positives = 121/182 (66%), Gaps = 1/182 (0%)
Query: 426 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 485
++ VKL EPG+ +RYY EKF+ + P + K +V Y EG+ WV+ YYY+G SW W+
Sbjct: 594 DEAVKLFEPGYHDRYYIEKFHIE-PNQIPALSKHMVKCYIEGVSWVLMYYYQGCASWTWY 652
Query: 486 YPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 545
YPYHYAP A D D +I FELG PF P+ QL+ V P+AS H LPE +R LM+ +S
Sbjct: 653 YPYHYAPLAEDFVDFHDLDIKFELGEPFLPYEQLMSVLPAASGHNLPEVFRPLMSSEDSE 712
Query: 546 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 605
I DFYPT+F +DMNGK+ SWQGIA LPFIDE RLL + L+E+E RRN+ +L
Sbjct: 713 IIDFYPTEFPIDMNGKKMSWQGIALLPFIDETRLLTATRNQYKFLSEDEKRRNTRNDPVL 772
Query: 606 FV 607
+
Sbjct: 773 LI 774
>gi|349581214|dbj|GAA26372.1| K7_Rat1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1006
Score = 273 bits (697), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 146/334 (43%), Positives = 201/334 (60%), Gaps = 16/334 (4%)
Query: 1 MNQQRSRRFRASKDA-ADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAV 59
MNQQR+RRFR+++DA ++ A EE +RQ E + + +DSN ITPGT FM
Sbjct: 110 MNQQRARRFRSARDAQIENEAREEIMRQREEVGEIIDDAVRNKKTWDSNAITPGTPFMDK 169
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
L+ AL+Y+ +L DPGW+ ++VI+SDA VPGEGEHKIM+++R QR P Y+PNT HC+
Sbjct: 170 LAAALRYWTAFKLATDPGWKNLQVIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCI 229
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
YGLDADLI L LATHE HF ILRE VF + + L K E +
Sbjct: 230 YGLDADLIFLGLATHEPHFKILREDVFAQDNRKRNNL-------------KDTINMTEEE 276
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
++ + + ++P+ +LHI LREYL E +P PF DLE +DD++FMCFF GNDFLP
Sbjct: 277 KQFLQKQISEQPFLWLHINVLREYLSAELWVPGLPFTFDLERAIDDWVFMCFFCGNDFLP 336
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P L++RE +I++L+ ++K L Y+T +L VE +Q +GS E IF+ R
Sbjct: 337 HLPCLDVRENSIDILLDIWKVVLPKLKTYMTCDGVLNLPSVETLLQHLGSREGDIFKTRH 396
Query: 300 RLHQRHAERIKREKAQAR--RGDDVEPLAQPDSL 331
R E +R KAQ +G D P + L
Sbjct: 397 IQEARKKEAFERRKAQKNMSKGQDRHPTVATEQL 430
Score = 202 bits (514), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 96/184 (52%), Positives = 125/184 (67%), Gaps = 5/184 (2%)
Query: 415 KSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 474
K+ F++D + VKL EPG+ ERYY KF+ TP++ E+ RKD+V Y EG+ WV+ Y
Sbjct: 587 KNGVFDTD----EFVKLFEPGYHERYYTAKFHV-TPQDIEQLRKDMVKCYIEGVAWVLMY 641
Query: 475 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEH 534
YY+G SW WFYPYHYAP A+D I FE G PF P+ QL+ V P+AS HALP+
Sbjct: 642 YYQGCASWNWFYPYHYAPLATDFHGFSHLEIKFEEGTPFLPYEQLMSVLPAASGHALPKI 701
Query: 535 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 594
+R LM++P+S I DFYP +F +DMNGK+ SWQGIA LPFID+ RLL V+ L++ E
Sbjct: 702 FRSLMSEPDSEIIDFYPEEFPIDMNGKKMSWQGIALLPFIDQDRLLTAVRAQYPLLSDAE 761
Query: 595 ARRN 598
RN
Sbjct: 762 RARN 765
>gi|6324622|ref|NP_014691.1| Rat1p [Saccharomyces cerevisiae S288c]
gi|417592|sp|Q02792.3|XRN2_YEAST RecName: Full=5'-3' exoribonuclease 2; AltName: Full=Ribonucleic
acid-trafficking protein 1; AltName: Full=p116
gi|172365|gb|AAA34960.1| Rat1p [Saccharomyces cerevisiae]
gi|386005|gb|AAB26818.1| transcription activator [Saccharomyces cerevisiae]
gi|1420179|emb|CAA99240.1| RAT1 [Saccharomyces cerevisiae]
gi|285814937|tpg|DAA10830.1| TPA: Rat1p [Saccharomyces cerevisiae S288c]
Length = 1006
Score = 271 bits (694), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 147/334 (44%), Positives = 202/334 (60%), Gaps = 16/334 (4%)
Query: 1 MNQQRSRRFRASKDA-ADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAV 59
MNQQR+RRFR+++DA ++ A EE +RQ E + + +DSN ITPGT FM
Sbjct: 110 MNQQRARRFRSARDAQIENEAREEIMRQREEVGEIIDDAVRNKKTWDSNAITPGTPFMDK 169
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
L+ AL+Y+ +L DPGW+ ++VI+SDA VPGEGEHKIM+++R QR P Y+PNT HC+
Sbjct: 170 LAAALRYWTAFKLATDPGWKNLQVIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCI 229
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
YGLDADLI L LATHE HF ILRE VF + + +L + K +F
Sbjct: 230 YGLDADLIFLGLATHEPHFKILREDVFAQDNRKR-------NNLKDTINMTEEEK--QFL 280
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
+K + ++P+ +LHI LREYL E +P PF DLE +DD++FMCFF GNDFLP
Sbjct: 281 QKQNS----EQPFLWLHINVLREYLSAELWVPGLPFTFDLERAIDDWVFMCFFCGNDFLP 336
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P L++RE +I++L+ ++K L Y+T +L VE +Q +GS E IF+ R
Sbjct: 337 HLPCLDVRENSIDILLDIWKVVLPKLKTYMTCDGVLNLPSVETLLQHLGSREGDIFKTRH 396
Query: 300 RLHQRHAERIKREKAQAR--RGDDVEPLAQPDSL 331
R E +R KAQ +G D P + L
Sbjct: 397 IQEARKKEAFERRKAQKNMSKGQDRHPTVATEQL 430
Score = 202 bits (514), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 96/184 (52%), Positives = 125/184 (67%), Gaps = 5/184 (2%)
Query: 415 KSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 474
K+ F++D + VKL EPG+ ERYY KF+ TP++ E+ RKD+V Y EG+ WV+ Y
Sbjct: 587 KNGVFDTD----EFVKLFEPGYHERYYTAKFHV-TPQDIEQLRKDMVKCYIEGVAWVLMY 641
Query: 475 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEH 534
YY+G SW WFYPYHYAP A+D I FE G PF P+ QL+ V P+AS HALP+
Sbjct: 642 YYQGCASWNWFYPYHYAPLATDFHGFSHLEIKFEEGTPFLPYEQLMSVLPAASGHALPKI 701
Query: 535 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 594
+R LM++P+S I DFYP +F +DMNGK+ SWQGIA LPFID+ RLL V+ L++ E
Sbjct: 702 FRSLMSEPDSEIIDFYPEEFPIDMNGKKMSWQGIALLPFIDQDRLLTAVRAQYPLLSDAE 761
Query: 595 ARRN 598
RN
Sbjct: 762 RARN 765
>gi|151945677|gb|EDN63918.1| 5'-3'-exoribonuclease [Saccharomyces cerevisiae YJM789]
gi|190407386|gb|EDV10653.1| 5'-3' exoribonuclease [Saccharomyces cerevisiae RM11-1a]
gi|259149530|emb|CAY86334.1| Rat1p [Saccharomyces cerevisiae EC1118]
gi|323346498|gb|EGA80785.1| Rat1p [Saccharomyces cerevisiae Lalvin QA23]
gi|365763283|gb|EHN04813.1| Rat1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1006
Score = 271 bits (694), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 147/334 (44%), Positives = 202/334 (60%), Gaps = 16/334 (4%)
Query: 1 MNQQRSRRFRASKDA-ADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAV 59
MNQQR+RRFR+++DA ++ A EE +RQ E + + +DSN ITPGT FM
Sbjct: 110 MNQQRARRFRSARDAQIENEAREEIMRQREEVGEIIDDAVRNKKTWDSNAITPGTPFMDK 169
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
L+ AL+Y+ +L DPGW+ ++VI+SDA VPGEGEHKIM+++R QR P Y+PNT HC+
Sbjct: 170 LAAALRYWTAFKLATDPGWKNLQVIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCI 229
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
YGLDADLI L LATHE HF ILRE VF + + +L + K +F
Sbjct: 230 YGLDADLIFLGLATHEPHFKILREDVFAQDNRKR-------NNLKDTINMTEEEK--QFL 280
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
+K + ++P+ +LHI LREYL E +P PF DLE +DD++FMCFF GNDFLP
Sbjct: 281 QKQNS----EQPFLWLHINVLREYLSAELWVPGLPFTFDLERAIDDWVFMCFFCGNDFLP 336
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P L++RE +I++L+ ++K L Y+T +L VE +Q +GS E IF+ R
Sbjct: 337 HLPCLDVRENSIDILLDIWKVVLPKLKTYMTCDGVLNLPSVETLLQHLGSREGDIFKTRH 396
Query: 300 RLHQRHAERIKREKAQAR--RGDDVEPLAQPDSL 331
R E +R KAQ +G D P + L
Sbjct: 397 IQEARKKEAFERRKAQKNMSKGQDRHPTVATEQL 430
Score = 202 bits (514), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 96/184 (52%), Positives = 125/184 (67%), Gaps = 5/184 (2%)
Query: 415 KSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 474
K+ F++D + VKL EPG+ ERYY KF+ TP++ E+ RKD+V Y EG+ WV+ Y
Sbjct: 587 KNGVFDTD----EFVKLFEPGYHERYYTAKFHV-TPQDIEQLRKDMVKCYIEGVAWVLMY 641
Query: 475 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEH 534
YY+G SW WFYPYHYAP A+D I FE G PF P+ QL+ V P+AS HALP+
Sbjct: 642 YYQGCASWNWFYPYHYAPLATDFHGFSHLEIKFEEGTPFLPYEQLMSVLPAASGHALPKI 701
Query: 535 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 594
+R LM++P+S I DFYP +F +DMNGK+ SWQGIA LPFID+ RLL V+ L++ E
Sbjct: 702 FRSLMSEPDSEIIDFYPEEFPIDMNGKKMSWQGIALLPFIDQDRLLTAVRAQYPLLSDAE 761
Query: 595 ARRN 598
RN
Sbjct: 762 RARN 765
>gi|392296379|gb|EIW07481.1| Rat1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1006
Score = 271 bits (694), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 147/334 (44%), Positives = 202/334 (60%), Gaps = 16/334 (4%)
Query: 1 MNQQRSRRFRASKDA-ADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAV 59
MNQQR+RRFR+++DA ++ A EE +RQ E + + +DSN ITPGT FM
Sbjct: 110 MNQQRARRFRSARDAQIENEAREEIMRQREEVGEIIDDAVRNKKTWDSNAITPGTPFMDK 169
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
L+ AL+Y+ +L DPGW+ ++VI+SDA VPGEGEHKIM+++R QR P Y+PNT HC+
Sbjct: 170 LAAALRYWTAFKLATDPGWKNLQVIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCI 229
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
YGLDADLI L LATHE HF ILRE VF + + +L + K +F
Sbjct: 230 YGLDADLIFLGLATHEPHFKILREDVFAQDNRKR-------NNLKDTINMTEEEK--QFL 280
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
+K + ++P+ +LHI LREYL E +P PF DLE +DD++FMCFF GNDFLP
Sbjct: 281 QKQNS----EQPFLWLHINVLREYLSAELWVPGLPFTFDLERAIDDWVFMCFFCGNDFLP 336
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P L++RE +I++L+ ++K L Y+T +L VE +Q +GS E IF+ R
Sbjct: 337 HLPCLDVRENSIDILLDIWKVVLPKLKTYMTCDGVLNLPSVETLLQHLGSREGDIFKTRH 396
Query: 300 RLHQRHAERIKREKAQAR--RGDDVEPLAQPDSL 331
R E +R KAQ +G D P + L
Sbjct: 397 IQEARKKEAFERRKAQKNMSKGQDRHPTVATEQL 430
Score = 202 bits (514), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 96/184 (52%), Positives = 125/184 (67%), Gaps = 5/184 (2%)
Query: 415 KSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 474
K+ F++D + VKL EPG+ ERYY KF+ TP++ E+ RKD+V Y EG+ WV+ Y
Sbjct: 587 KNGVFDTD----EFVKLFEPGYHERYYTAKFHV-TPQDIEQLRKDMVKCYIEGVAWVLMY 641
Query: 475 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEH 534
YY+G SW WFYPYHYAP A+D I FE G PF P+ QL+ V P+AS HALP+
Sbjct: 642 YYQGCASWNWFYPYHYAPLATDFHGFSHLEIKFEEGTPFLPYEQLMSVLPAASGHALPKI 701
Query: 535 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 594
+R LM++P+S I DFYP +F +DMNGK+ SWQGIA LPFID+ RLL V+ L++ E
Sbjct: 702 FRSLMSEPDSEIIDFYPEEFPIDMNGKKMSWQGIALLPFIDQDRLLTAVRAQYPLLSDAE 761
Query: 595 ARRN 598
RN
Sbjct: 762 RARN 765
>gi|312085747|ref|XP_003144802.1| hypothetical protein LOAG_09226 [Loa loa]
Length = 1443
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 179/527 (33%), Positives = 253/527 (48%), Gaps = 74/527 (14%)
Query: 99 MSYVRLQRNLPGYDPNTRHCLYGLDADL-----IMLALATHEVHFSILREVVFTPGQQDK 153
M ++R +R+ YD NTRHCLYGLDADL IML + +HE HF++LRE V Q+
Sbjct: 1 MDFIRSERSRSDYDANTRHCLYGLDADLASFLQIMLGICSHEPHFALLREEVKFGRQR-- 58
Query: 154 CFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNP 213
N GK K E + LH+ LREYL +EF
Sbjct: 59 ------------NHNGKHKTGVNEI------------TFHLLHLSLLREYLSWEFHSLKE 94
Query: 214 --PFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTD 271
PFE DLE ++DD++ M F VGNDF+PH+P + I E A+ LL A Y + L GY+ +
Sbjct: 95 KLPFEYDLESVIDDWVLMGFLVGNDFIPHLPHVHIHEDALPLLYATYNEVLPQLDGYINE 154
Query: 272 GSKPSLRRVEHFIQAVGSYEDRIFQKR----ARLHQRHAERIKRE--KAQARRGDDVEPL 325
+L+R E F++ + + F ++ A L + ++ Q +D+EP
Sbjct: 155 AGVLNLKRFEIFLKNFAKNDRKNFIEQMDDEAYLSSKRISNAWKKGPNDQQNCDEDLEPF 214
Query: 326 AQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKV--PRLSSGATIG 383
L+ ++ G D+ S ++ PR+ +
Sbjct: 215 D---------------LSDAEKTEITEKDSRKGAFDSDSNASDECEEIAGPRI-----LT 254
Query: 384 AAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEED-KVKLGEPGWKERYYE 442
AA F D + + A LL D+S + D V K YY
Sbjct: 255 AAKRMTHGYFGLDKDSDNDLPIA----LLDDESYENDYDQSSWTPVVSRAFKNHKRDYYN 310
Query: 443 EKF---NAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKD 499
+K N E RE+ Y + W +HYYY G CSW WFYP+HYAP+ SD+ D
Sbjct: 311 DKMKYSNISKEELREQAEG-----YIRAIQWNLHYYYHGCCSWSWFYPHHYAPYISDVSD 365
Query: 500 LDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMN 559
+ ++F+L PFKPF QLL V P+AS+ LP YR+LM+DP SPI DFYP F+ D+N
Sbjct: 366 FAEMEMNFDLSEPFKPFEQLLAVLPAASADCLPLPYRELMSDPKSPIIDFYPEQFDTDLN 425
Query: 560 GKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 606
GK+ W+ + +PFI E RLL + + LT+EE +RN +LF
Sbjct: 426 GKKNDWEAVVLIPFIREDRLLQAMAIKDPLLTDEERKRNLHGPHLLF 472
>gi|367010234|ref|XP_003679618.1| hypothetical protein TDEL_0B02780 [Torulaspora delbrueckii]
gi|359747276|emb|CCE90407.1| hypothetical protein TDEL_0B02780 [Torulaspora delbrueckii]
Length = 1030
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 143/334 (42%), Positives = 203/334 (60%), Gaps = 16/334 (4%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPK-SDSQVFDSNVITPGTEFMAV 59
MNQQRSRRFR+++DA E++ +E E+ G + + + +DSN ITPGT FM
Sbjct: 110 MNQQRSRRFRSARDAQVENEAREQVMREREQVGEFIDDSVKNKKTWDSNAITPGTPFMDK 169
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
L+ AL+Y+I +L+ DPGW+ ++VI+SDA VPGEGEHKIM++VR QR P Y+PNT HC+
Sbjct: 170 LAAALRYWISFKLSTDPGWKNLQVIISDATVPGEGEHKIMNFVRSQRADPQYNPNTTHCI 229
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
YGLDADLI L LATHE HF ILRE VF + + + N + K+ + D
Sbjct: 230 YGLDADLIFLGLATHEPHFKILREDVFAQNNRKRHNFTD-----SLNMTEEEKQLIAKQD 284
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
+KP+ +LHI LREYL E +P +LE +DD++FMCFF GNDFLP
Sbjct: 285 S--------EKPFLWLHISVLREYLAAELWVPKLSMPFNLERAIDDWVFMCFFCGNDFLP 336
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+L++RE +I++L+ ++K +L Y+T + +L+ VE + +G+ E IF+ R
Sbjct: 337 HLPSLDVRENSIDILLDIWKVVLPSLKSYMTCDGELNLQSVEMLLGQLGAREGDIFKTRH 396
Query: 300 RLHQRHAERIKREKAQ--ARRGDDVEPLAQPDSL 331
R E I+R K Q +G D P + L
Sbjct: 397 IQEVRKQEAIQRRKLQRNVSKGQDRHPTVPSEQL 430
Score = 205 bits (522), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 99/193 (51%), Positives = 127/193 (65%), Gaps = 5/193 (2%)
Query: 415 KSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 474
+S F+SD +VKL EPG++ERYY KFN K E E RKD+V RY EG+ WV+ Y
Sbjct: 595 RSGVFDSD----VEVKLYEPGYRERYYVAKFNIKE-SEIEALRKDLVRRYVEGVSWVLAY 649
Query: 475 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEH 534
YY+G SW W+YPYHYAPFASD + + FE G P P+ QL+ V P+AS+H LP
Sbjct: 650 YYQGCASWDWYYPYHYAPFASDFFGIADMKVEFEEGEPILPYEQLMSVLPAASAHTLPSI 709
Query: 535 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 594
++ LM++P+S I DFYPT+F +DMNGK+ SWQGIA LPFI+ RLL V+ LTE E
Sbjct: 710 FKPLMSEPDSEIIDFYPTEFPIDMNGKKMSWQGIALLPFIEAKRLLRVVRNQYSRLTEYE 769
Query: 595 ARRNSIMADMLFV 607
RN +L +
Sbjct: 770 RSRNVCKEPVLLI 782
>gi|256273435|gb|EEU08371.1| Rat1p [Saccharomyces cerevisiae JAY291]
Length = 1006
Score = 270 bits (689), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 143/316 (45%), Positives = 196/316 (62%), Gaps = 14/316 (4%)
Query: 1 MNQQRSRRFRASKDA-ADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAV 59
MNQQR+RRFR+++DA ++ A EE +RQ E + + +DSN ITPGT FM
Sbjct: 110 MNQQRARRFRSARDAQIENEAREEIMRQREEVGEIIDDAVRNKKTWDSNAITPGTPFMDK 169
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
L+ AL+Y+ +L DPGW+ ++VI+SDA VPGEGEHKIM+++R QR P Y+PNT HC+
Sbjct: 170 LAAALRYWTAFKLATDPGWKNLQVIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCI 229
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
YGLDADLI L LATHE HF ILRE VF + + +L + K +F
Sbjct: 230 YGLDADLIFLGLATHEPHFKILREDVFAQDNRKR-------NNLKDTINMTEEEK--QFL 280
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
+K + ++P+ +LHI LREYL E +P PF DLE +DD++FMCFF GNDFLP
Sbjct: 281 QKQNS----EQPFLWLHINVLREYLSAELWVPGLPFTFDLERAIDDWVFMCFFCGNDFLP 336
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P L++RE +I++L+ ++K L Y+T +L VE +Q +GS E IF+ R
Sbjct: 337 HLPCLDVRENSIDILLDIWKVVLPKLKTYMTCDGVLNLPSVETLLQHLGSREGDIFKTRH 396
Query: 300 RLHQRHAERIKREKAQ 315
R E +R KAQ
Sbjct: 397 IQEARKKEAFERRKAQ 412
Score = 202 bits (514), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 96/184 (52%), Positives = 125/184 (67%), Gaps = 5/184 (2%)
Query: 415 KSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 474
K+ F++D + VKL EPG+ ERYY KF+ TP++ E+ RKD+V Y EG+ WV+ Y
Sbjct: 587 KNGVFDTD----EFVKLFEPGYHERYYTAKFHV-TPQDIEQLRKDMVKCYIEGVAWVLMY 641
Query: 475 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEH 534
YY+G SW WFYPYHYAP A+D I FE G PF P+ QL+ V P+AS HALP+
Sbjct: 642 YYQGCASWNWFYPYHYAPLATDFHGFSHLEIKFEEGTPFLPYEQLMSVLPAASGHALPKI 701
Query: 535 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 594
+R LM++P+S I DFYP +F +DMNGK+ SWQGIA LPFID+ RLL V+ L++ E
Sbjct: 702 FRSLMSEPDSEIIDFYPEEFPIDMNGKKMSWQGIALLPFIDQDRLLTAVRAQYPLLSDAE 761
Query: 595 ARRN 598
RN
Sbjct: 762 RARN 765
>gi|294899194|ref|XP_002776531.1| 5'-3' exoribonuclease, putative [Perkinsus marinus ATCC 50983]
gi|239883563|gb|EER08347.1| 5'-3' exoribonuclease, putative [Perkinsus marinus ATCC 50983]
Length = 421
Score = 270 bits (689), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 137/280 (48%), Positives = 191/280 (68%), Gaps = 12/280 (4%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRF+A+++A + EEE+LR++ +EGR+ PP +DSNVITPGT F+ +
Sbjct: 119 MNQQRARRFKAAQEATEQMKEEEKLRRQMVKEGRE-PPSKKGVPWDSNVITPGTPFLDKV 177
Query: 61 SIALQYYIHLRLNNDPGWEKI--KVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHC 118
+ L +YI R+ NDP W+ + + ILSDA PGEGEHKIM ++R QR + GY+PNT H
Sbjct: 178 AHMLHWYISDRMTNDPLWQLLGFRCILSDAGSPGEGEHKIMDFIRKQRMMEGYNPNTTHM 237
Query: 119 LYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEF 178
LYG DADLIML LATHE+ F I+REVV P ++ KC+LCG+ GHL + C G ++
Sbjct: 238 LYGADADLIMLGLATHEISFYIIREVVLKP-EERKCYLCGKVGHLPSECTGDDQQPDLGD 296
Query: 179 DEKGDEVVVPKKPYQFLHIWTLREYLDYEFRI----PNP----PFEIDLECIVDDFIFMC 230
+ + DE ++ KP+Q + + LREYL +F PN PF D+E ++DDF+FMC
Sbjct: 297 ESEEDEDMLEMKPFQIISLPVLREYLVEQFTTAFCPPNQKCILPFPFDVERVIDDFVFMC 356
Query: 231 FFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLT 270
FFVGNDFLPH+P+L IR+G+I+ ++ +Y + L YLT
Sbjct: 357 FFVGNDFLPHLPSLNIRDGSIDQMICLYVEILPTLTDYLT 396
>gi|302309530|ref|NP_986969.2| AGR303Wp [Ashbya gossypii ATCC 10895]
gi|442570294|sp|Q74ZA0.4|XRN2_ASHGO RecName: Full=5'-3' exoribonuclease 2
gi|299788402|gb|AAS54793.2| AGR303Wp [Ashbya gossypii ATCC 10895]
gi|374110220|gb|AEY99125.1| FAGR303Wp [Ashbya gossypii FDAG1]
Length = 945
Score = 269 bits (687), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 142/319 (44%), Positives = 202/319 (63%), Gaps = 20/319 (6%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQ-VFDSNVITPGTEFMAV 59
MNQQRSRRFR+++DA + E+ R+ E E G + ++ +D+N ITPGT FM
Sbjct: 110 MNQQRSRRFRSARDAKLANEEKARVLAEREAYGEMIDDAVKAKKSWDTNAITPGTPFMDK 169
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
L+ AL+Y+ +L DPGW+ ++VI+SDA VPGEGEHKIM+++R QR Y+PNT HC+
Sbjct: 170 LAAALRYWTSFKLATDPGWKNLQVIISDATVPGEGEHKIMNFIRSQRADVQYNPNTTHCI 229
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
YGLDADLI L LATHE HF ILRE VF QD Q H + + K+ E D
Sbjct: 230 YGLDADLIFLGLATHEPHFKILREDVFA---QDNRRRPRQ--HDMMDMSAEEKQALIEQD 284
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
+ KP+ +LH+ LREYL E +P PF DLE +DD++FMCFF GNDFLP
Sbjct: 285 AE--------KPFLWLHVSVLREYLSAELLVPRLPFHFDLERAIDDWVFMCFFCGNDFLP 336
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+L++RE +I++L+ ++K +L YLT K +L+ VE + +G+ E IF+K
Sbjct: 337 HLPSLDVRENSIDILVDIWKAVLPSLKTYLTCDGKLNLKGVEKVLAQLGNRESDIFKK-- 394
Query: 300 RLHQRHAERIKREKAQARR 318
++ + +++++AQ RR
Sbjct: 395 ----KYEQELRKKEAQERR 409
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 87/179 (48%), Positives = 121/179 (67%), Gaps = 1/179 (0%)
Query: 429 VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPY 488
V+L EPG+ +RYY+ KF+ T + RK VV Y EG+ WV+ YYY+G SW W+YPY
Sbjct: 583 VRLFEPGYHDRYYQAKFHVPT-GSIDALRKKVVRSYVEGISWVLLYYYQGCPSWTWYYPY 641
Query: 489 HYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISD 548
HYAPFASD + +++F+LG PF P+ QL+ V P+ASSH LP+ +R LM+DP S I D
Sbjct: 642 HYAPFASDFTGISDLSVTFDLGEPFLPYEQLMSVLPAASSHNLPDVFRSLMSDPESEIYD 701
Query: 549 FYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
FYP +F +DMNG++ +W+ + LPFIDE RLL V++ L+E E RN ++L +
Sbjct: 702 FYPEEFPIDMNGEKMAWKALVLLPFIDETRLLAAVRQKYPLLSEAERARNVRRDEVLLI 760
>gi|255717294|ref|XP_002554928.1| KLTH0F17116p [Lachancea thermotolerans]
gi|238936311|emb|CAR24491.1| KLTH0F17116p [Lachancea thermotolerans CBS 6340]
Length = 982
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 142/314 (45%), Positives = 193/314 (61%), Gaps = 14/314 (4%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKS-DSQVFDSNVITPGTEFMAV 59
MNQQR+RRFR+++DA E ER+ E E G + + + +DSN ITPGT FM
Sbjct: 110 MNQQRARRFRSARDAQIQNEERERVLLEKEDMGEIIDDSVRNKKTWDSNAITPGTPFMDK 169
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
L+ AL+Y+ +L DPGW+ ++VI+SDA VPGEGEHKIM++VR QR P Y+PNT HC+
Sbjct: 170 LAAALRYWTSFKLATDPGWKNLQVIISDATVPGEGEHKIMNFVRSQRADPQYNPNTSHCI 229
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
YGLDADLI L LATHE HF ILRE VF + + Q N + K + D
Sbjct: 230 YGLDADLIFLGLATHEPHFKILREDVFAQDNRRR-----QRVQDTINMSEEDKAALLQQD 284
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
+KP+ +LHI LREYL E +P FE D E VDD++FMCFF GNDFLP
Sbjct: 285 S--------QKPFLWLHISVLREYLAVELFVPRLSFEFDTERAVDDWVFMCFFCGNDFLP 336
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+L++RE +I++L+ ++K L Y+T + +L VE +Q +G+ E ++F+ R
Sbjct: 337 HLPSLDVRENSIDILVEIWKTILPRLKTYMTCDGELNLDSVELLLQHLGAREPQMFKDRF 396
Query: 300 RLHQRHAERIKREK 313
+ R E KR K
Sbjct: 397 QQEIRKQEAAKRRK 410
Score = 206 bits (523), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 95/182 (52%), Positives = 125/182 (68%), Gaps = 1/182 (0%)
Query: 426 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 485
+++VKL EPG+ +RYY KF+ + ++ RK+VV Y EG+ WV+ YYY+G SW W+
Sbjct: 588 DEEVKLFEPGYHDRYYTAKFHIDE-RDIDQLRKEVVRSYVEGVSWVLLYYYQGCASWNWY 646
Query: 486 YPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 545
YPYHYAPFASD KD+ I+FE G PF PF QL+ V P+AS H LP +R LM++P+S
Sbjct: 647 YPYHYAPFASDFKDIKDLKITFEKGEPFLPFEQLMSVLPAASGHNLPSIFRPLMSEPDSE 706
Query: 546 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 605
I DFYP +F +DMNGK+ SWQGIA LPFIDE RLL V+ L+ EE RN ++L
Sbjct: 707 IIDFYPEEFPIDMNGKKMSWQGIALLPFIDEKRLLRVVRDQYERLSPEEKARNVRKQEVL 766
Query: 606 FV 607
+
Sbjct: 767 LI 768
>gi|366995071|ref|XP_003677299.1| hypothetical protein NCAS_0G00590 [Naumovozyma castellii CBS 4309]
gi|342303168|emb|CCC70946.1| hypothetical protein NCAS_0G00590 [Naumovozyma castellii CBS 4309]
Length = 1012
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 142/319 (44%), Positives = 197/319 (61%), Gaps = 20/319 (6%)
Query: 1 MNQQRSRRFRASKDAA-DSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAV 59
MNQQR+RRFR+++DAA ++ A EE LRQ+ E + + +DSN ITPGT FM
Sbjct: 110 MNQQRARRFRSARDAAIENEAREEILRQKEEIGEVIDEAVKNKKTWDSNAITPGTPFMDK 169
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
L+ +L+Y+ +L DPGW+ +++I+SDA VPGEGEHKIM+++R QR P Y+PNT HC+
Sbjct: 170 LAASLRYWTAFKLATDPGWKNLQIIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCI 229
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
YGLDADLI L LATHE HF ILRE VF N + +
Sbjct: 230 YGLDADLIFLGLATHEPHFRILREDVFAQN----------------NNKRRNFDDTLNMS 273
Query: 180 EKGDEVVVPK---KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGND 236
E+ ++++ K KP+ +LHI LREYL E IP F DLE +DD++FMCFF GND
Sbjct: 274 EEEKQLLLAKDSEKPFLWLHINVLREYLGAELFIPRLSFPFDLERAIDDWVFMCFFCGND 333
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLPH+P+L++RE +I++L+ ++K L Y+T + +L VE +Q +GS E IF+
Sbjct: 334 FLPHLPSLDVRENSIDILLDIWKIVLPNLKTYMTCDGELNLESVEMLLQQLGSREGDIFK 393
Query: 297 KRARLHQRHAERIKREKAQ 315
R R E +R+K Q
Sbjct: 394 SRHIQEVRKQEAYQRKKLQ 412
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 117/275 (42%), Positives = 155/275 (56%), Gaps = 15/275 (5%)
Query: 415 KSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 474
KS ++D + VKL EPG++ERYY+ K + E E RK +V Y EG+ WV+ Y
Sbjct: 584 KSGVIDTD----EAVKLYEPGFRERYYKAKCYV-SDAEIEPLRKGMVRSYVEGVSWVLLY 638
Query: 475 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEH 534
YY+G SW W+YPYHYAPFASD D+ + FELG PF P+ QL+ V P+AS H LP
Sbjct: 639 YYQGCASWDWYYPYHYAPFASDFFDITNIKVEFELGKPFLPYEQLMSVLPAASGHTLPAI 698
Query: 535 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 594
+R LM++P+SPI DFYPT+F +DMNGK+ SWQGI+ LPFIDE RLL+ V+ LT E
Sbjct: 699 FRPLMSEPDSPIIDFYPTEFPIDMNGKKMSWQGISLLPFIDEKRLLETVRDQYPKLTPAE 758
Query: 595 ARRNSIMADMLFVLLSHPLSASIYTLDEHCKQL-KIKERVEVKERLNPELSDGMNGYISP 653
RN +L + S + K+ K + EV E G++G +S
Sbjct: 759 RSRNVCNDPVLLI------SNKNANFERFTKKFYKTENEDEVSEFTFHHFKSGLSGVVSA 812
Query: 654 -CAGDPHPPVFRSPV--ASMEDIMGNQVLCAIYKL 685
G SPV + D+ N +L YKL
Sbjct: 813 DKEGFKLGSKIVSPVQGGGLPDLSTNLLLKLCYKL 847
>gi|156839637|ref|XP_001643507.1| hypothetical protein Kpol_473p8 [Vanderwaltozyma polyspora DSM
70294]
gi|156114121|gb|EDO15649.1| hypothetical protein Kpol_473p8 [Vanderwaltozyma polyspora DSM
70294]
Length = 1057
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 139/319 (43%), Positives = 193/319 (60%), Gaps = 19/319 (5%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKS-DSQVFDSNVITPGTEFMAV 59
MNQQR+RRFR+++DA E + +E E G + + + +DSN ITPGT FM
Sbjct: 110 MNQQRARRFRSARDAKIQDEAREEIMREKEEIGEHIDESVRNKKTWDSNAITPGTPFMDK 169
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
L+ AL+Y+ +L DPGW+ +++I+SDA VPGEGEHKIM+++R QR P Y+PNT HC+
Sbjct: 170 LAAALRYWTAFKLATDPGWKNLQIIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCI 229
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
YGLDADLI L LATHE HF ILRE VF G K + N + K
Sbjct: 230 YGLDADLIFLGLATHEPHFKILREDVFAQGNNRK------RHNFKDNINMTEEEKQIIMK 283
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
E +KP+ +LHI LREYL E + PF DLE +DD++FMCFF GNDFLP
Sbjct: 284 EDS------QKPFLWLHISVLREYLSAELWVQRLPFPFDLERAIDDWVFMCFFCGNDFLP 337
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+L++RE +I++L+ ++K L Y+T + +L VE + +GS E IF+
Sbjct: 338 HLPSLDVRENSIDILLDIWKVVLPNLKDYMTCDGELNLASVEKLLYQLGSREGDIFKT-- 395
Query: 300 RLHQRHAERIKREKAQARR 318
RH + I++++A RR
Sbjct: 396 ----RHIQEIRKQEALQRR 410
Score = 196 bits (498), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 120/182 (65%), Gaps = 1/182 (0%)
Query: 426 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 485
++ V+L EPG+ RYY KFN +RK VV Y EG+ WV+ YYY+G SW W+
Sbjct: 603 DESVRLYEPGYHSRYYTSKFNIAEENITPLSRK-VVRSYIEGVSWVLLYYYQGCASWNWY 661
Query: 486 YPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 545
YPYHYAPFASD ++ I+FELG PF P+ QL+ V P+AS + LP+ ++ LM +P+S
Sbjct: 662 YPYHYAPFASDFTNIADMEINFELGEPFLPYEQLMSVLPAASGNMLPKVFQSLMRNPDSE 721
Query: 546 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 605
I DFYP +F +DMNGK+ SWQGIA LPFIDE RLL V+ LT+ E RN +++
Sbjct: 722 IVDFYPVEFLIDMNGKKMSWQGIALLPFIDEERLLKSVRSQYKVLTDSEKSRNVRNQEIV 781
Query: 606 FV 607
+
Sbjct: 782 LI 783
>gi|367005296|ref|XP_003687380.1| hypothetical protein TPHA_0J01240 [Tetrapisispora phaffii CBS 4417]
gi|357525684|emb|CCE64946.1| hypothetical protein TPHA_0J01240 [Tetrapisispora phaffii CBS 4417]
Length = 1113
Score = 267 bits (682), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 138/320 (43%), Positives = 197/320 (61%), Gaps = 21/320 (6%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPK-SDSQVFDSNVITPGTEFMAV 59
MNQQR+RRFR+++DA E + ++ E G+ + + +DSN ITPGT FM
Sbjct: 110 MNQQRARRFRSARDAKFENEAREEILKDKEAAGQVIDEAVKQKKTWDSNAITPGTPFMDK 169
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
L+ AL+Y+ +L+ DPGW+ ++VI+SDA VPGEGEHK+M+++R QR P Y+PNT HC+
Sbjct: 170 LAAALRYWTAFKLSTDPGWKNLQVIISDATVPGEGEHKLMNFIRAQRADPEYNPNTTHCI 229
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAG-EF 178
YGLDADLI L LATHE HF ILRE VF G + K K K G +
Sbjct: 230 YGLDADLIFLGLATHEPHFKILREDVFAQGSKPK----------------KHNFKDGLDM 273
Query: 179 DEKGDEVVV---PKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGN 235
E+ +++ +KP+ +LHI LREYL E +P F D+E +DD++FMCFF GN
Sbjct: 274 TEEEKQLITKEDSQKPFLWLHINVLREYLSAELWVPRLSFPFDIERAIDDWVFMCFFCGN 333
Query: 236 DFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 295
DFLPH+P L++RE +I++L+ ++K+ L Y+T + +L VE + +GS E IF
Sbjct: 334 DFLPHLPCLDVRENSIDILLDIWKRILPNLKTYMTCDGELNLESVELLLSQLGSREADIF 393
Query: 296 QKRARLHQRHAERIKREKAQ 315
+ R R E ++R+K Q
Sbjct: 394 KTRHLQEVRKKESMERKKQQ 413
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 107/237 (45%), Positives = 143/237 (60%), Gaps = 7/237 (2%)
Query: 416 SDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYY 475
SD + +D VKL EPG++ERYY KFN + ++ +KDVV Y EG+ WV+ YY
Sbjct: 608 SDTVSGVIDTDDYVKLYEPGFRERYYASKFNVDE-HDIDQLKKDVVRYYIEGVSWVLLYY 666
Query: 476 YEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHY 535
Y+G SW W+YPYHYAPFA+D +L +I F+LG PF PF QL+ V P+AS H LPE +
Sbjct: 667 YQGCASWNWYYPYHYAPFAADFTNLTDISIKFDLGEPFLPFEQLMSVMPAASGHTLPEIF 726
Query: 536 RKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEA 595
R LM+DP S I DFYP F +DMNGK+ SWQGIA LPFIDE RLL V+ L+++E
Sbjct: 727 RPLMSDPKSEIIDFYPEQFPIDMNGKKMSWQGIALLPFIDETRLLKAVRSKYEFLSDQEK 786
Query: 596 RRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYIS 652
RN +L + S D+ K + ++ KE G++G++S
Sbjct: 787 SRNVRKKAILVI------SNKNANYDQFVKDMYTEKVDAEKEFFFSHFKSGLSGFVS 837
>gi|402582266|gb|EJW76212.1| hypothetical protein WUBG_12878 [Wuchereria bancrofti]
Length = 410
Score = 266 bits (680), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 165/398 (41%), Positives = 220/398 (55%), Gaps = 29/398 (7%)
Query: 80 KIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFS 139
K KVILSDANVPGEGEHKIM ++R QR P +DPNT HCL G DADLIML LATHE +F+
Sbjct: 3 KFKVILSDANVPGEGEHKIMDFIRRQRASPSHDPNTVHCLCGADADLIMLGLATHEPNFN 62
Query: 140 ILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWT 199
I+RE F P QQ C LCGQ GH +C+G A E + + + F+ +
Sbjct: 63 IIREE-FVPNQQRPCDLCGQYGHDLNDCKGLASDDNSECQSSP---LQKETNFIFIRLPV 118
Query: 200 LREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYK 259
LREYL+ E IPN DLE +DD++FMCFFVGNDFLPH+P+LEIRE AI+ L+ +YK
Sbjct: 119 LREYLERELHIPNCSIPFDLERAIDDWVFMCFFVGNDFLPHLPSLEIRENAIDRLVKLYK 178
Query: 260 KEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARRG 319
+ G+LTD + RV+ + +G ED IF+ R Q+ R K +K + R
Sbjct: 179 DMVCEMKGHLTDSGIVHIERVQIILDKLGEVEDEIFKSRQEREQQFKRRNKEKKWRER-- 236
Query: 320 DDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSG 379
A P S +P SR GS L+ + Y + R ++ L
Sbjct: 237 ----TFATP-SYIP-SR--GSLLSPQTNGPMYLSG-------SNTRAMARTARLEALDFT 281
Query: 380 ATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKER 439
T+ + +N+ P N E + +EL + S S++ D+V+L E GWK+R
Sbjct: 282 GTVHTRTM--DNTAFHVPAINISENNDRKQELKNNSS----SEDEAFDEVRLWEDGWKDR 335
Query: 440 YYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYE 477
YY+ KF + R+ V L Y EGLCWV+HYYY+
Sbjct: 336 YYKSKFQVDGKD--IVFRRKVALAYVEGLCWVLHYYYQ 371
>gi|207341239|gb|EDZ69347.1| YOR048Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 1006
Score = 265 bits (678), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 144/334 (43%), Positives = 199/334 (59%), Gaps = 16/334 (4%)
Query: 1 MNQQRSRRFRASKDA-ADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAV 59
MNQQR+RRFR+++DA ++ A EE +RQ E + + +DSN ITPGT FM
Sbjct: 110 MNQQRARRFRSARDAQIENEAREEIMRQREEVGEIIDDAVRNKKTWDSNAITPGTPFMDK 169
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
L+ AL+Y+ +L DPGW+ ++VI+SDA VPGEGEHKIM+++R QR P Y+PNT HC+
Sbjct: 170 LAAALRYWTAFKLATDPGWKNLQVIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCI 229
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
YGLDAD L L THE HF ILRE VF + + +L + K +F
Sbjct: 230 YGLDADFNFLGLTTHEPHFKILREDVFAQDNRKR-------NNLKDTINMTEEEK--QFL 280
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
+K + ++P+ +LHI LREYL E +P PF DLE +DD++FMCFF GNDFLP
Sbjct: 281 QKQNS----EQPFLWLHINVLREYLSAELWVPGLPFTFDLERAIDDWVFMCFFCGNDFLP 336
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P L++RE +I++L+ ++K L Y+T +L VE +Q +GS E IF+ R
Sbjct: 337 HLPCLDVRENSIDILLDIWKVVLPKLKTYMTCDGVLNLPSVETLLQHLGSREGDIFKTRH 396
Query: 300 RLHQRHAERIKREKAQAR--RGDDVEPLAQPDSL 331
R E +R KAQ +G D P + L
Sbjct: 397 IQEARKKEAFERRKAQKNMSKGQDRHPTVATEQL 430
Score = 202 bits (514), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 96/184 (52%), Positives = 125/184 (67%), Gaps = 5/184 (2%)
Query: 415 KSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 474
K+ F++D + VKL EPG+ ERYY KF+ TP++ E+ RKD+V Y EG+ WV+ Y
Sbjct: 587 KNGVFDTD----EFVKLFEPGYHERYYTAKFHV-TPQDIEQLRKDMVKCYIEGVAWVLMY 641
Query: 475 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEH 534
YY+G SW WFYPYHYAP A+D I FE G PF P+ QL+ V P+AS HALP+
Sbjct: 642 YYQGCASWNWFYPYHYAPLATDFHGFSHLEIKFEEGTPFLPYEQLMSVLPAASGHALPKI 701
Query: 535 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 594
+R LM++P+S I DFYP +F +DMNGK+ SWQGIA LPFID+ RLL V+ L++ E
Sbjct: 702 FRSLMSEPDSEIIDFYPEEFPIDMNGKKMSWQGIALLPFIDQDRLLTAVRAQYPLLSDAE 761
Query: 595 ARRN 598
RN
Sbjct: 762 RARN 765
>gi|66826105|ref|XP_646407.1| 5'-3' exoribonuclease [Dictyostelium discoideum AX4]
gi|60474374|gb|EAL72311.1| 5'-3' exoribonuclease [Dictyostelium discoideum AX4]
Length = 1190
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 143/322 (44%), Positives = 203/322 (63%), Gaps = 28/322 (8%)
Query: 1 MNQQRSRRFRASKDA-----ADSAAEEERL------RQEFEREGRKLPPKSDSQVFDSNV 49
MNQQR+RRFRA+ D+ ++A ER+ +QE+E+ + K + FDSN
Sbjct: 108 MNQQRTRRFRAALDSRLDKDKEAALWRERIYDGLATQQEYEQ---YMEEKKNKFKFDSNC 164
Query: 50 ITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLP 109
ITPGT FM ++ +L+ Y+ +L DP W+ +K+I+SDA+VPGEGEHKIM YVR QR P
Sbjct: 165 ITPGTLFMDRVAESLRTYVAEKLTTDPAWKDVKIIISDASVPGEGEHKIMDYVRHQRAQP 224
Query: 110 GYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEG 169
YDPN +H +YGLDADLIML LATHEV+F ILRE + P + C C + GHLA C+
Sbjct: 225 DYDPNLKHIIYGLDADLIMLGLATHEVNFDILREFI-QPIARGVCHKCHKKGHLAIECK- 282
Query: 170 KAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFM 229
E D+ + +V K YQ LH+ L+EYL+ E ++ + PF D++ IVDDFIF+
Sbjct: 283 ------EEVDDSVKDFLV--KNYQILHLHLLKEYLELETKV-STPFGFDIDRIVDDFIFL 333
Query: 230 CFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGS 289
CFFVGNDFLPH+P LEI++GAI+ ++ YK+ + YL + + R+ A+
Sbjct: 334 CFFVGNDFLPHLPNLEIKDGAIDRVIKCYKELLPSFDDYLVSNGEVNFPRLSQIFVALTK 393
Query: 290 YEDRIFQKRARLHQRHAERIKR 311
E+ FQ++ Q+ A+ +K+
Sbjct: 394 GEEESFQRKI---QKDAQILKK 412
Score = 160 bits (406), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/188 (42%), Positives = 113/188 (60%), Gaps = 13/188 (6%)
Query: 429 VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPY 488
+K E GW++RYY+ F E E+ K + Y EGL WV+ YY++G SW W+YPY
Sbjct: 607 IKYSEEGWRDRYYQSCFQV----ENEDDIKQICKSYVEGLVWVLKYYFKGCSSWGWYYPY 662
Query: 489 HYAPFASDL-KDLDQFNI-SFELGHPFKPFNQLLGVFPSASSHALPEHYRKLM-----TD 541
HY+P+ +D+ K DQF +E+G PFKPFNQL+ V P AS +P+ Y+KLM +
Sbjct: 663 HYSPYITDISKFFDQFEYPQYEMGEPFKPFNQLMSVLPPASCQFVPKPYQKLMGISVDGE 722
Query: 542 P--NSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 599
P SPI +FYP F +D ++G+ LPFI+ +LL + K E LTEEE RN+
Sbjct: 723 PVEESPIIEFYPRAFRIDRGPTEPLYKGVCLLPFINSIKLLKTISKTEPLLTEEEVDRNT 782
Query: 600 IMADMLFV 607
+ D++F
Sbjct: 783 LGHDLMFC 790
>gi|218190750|gb|EEC73177.1| hypothetical protein OsI_07223 [Oryza sativa Indica Group]
Length = 790
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 144/309 (46%), Positives = 189/309 (61%), Gaps = 56/309 (18%)
Query: 31 REGRKLPPKSDSQ--------VFDSNVITPGTEFMAVLSIALQYYIHLRLNN-DPGWEKI 81
R GR+ S+ + V D NVITPGTEFM +S AL YYI RLN+ DPGW+ I
Sbjct: 107 RRGRRFAWASEEEEMQKISEGVSDPNVITPGTEFMEKISQALTYYIRARLNSSDPGWKHI 166
Query: 82 KVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSIL 141
VILSDANVPGEGEHKIMS++R QR++ GYDPNTRHCL+G DADLIMLALA+HEVHFSIL
Sbjct: 167 MVILSDANVPGEGEHKIMSFIRAQRSMEGYDPNTRHCLFGHDADLIMLALASHEVHFSIL 226
Query: 142 REVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLR 201
RE + E D P+K Y FL+IW LR
Sbjct: 227 RE---------------------------DNSQLTEAD--------PEKQYLFLNIWVLR 251
Query: 202 EYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKE 261
EYL+ E +I +P E D+E ++DDFIF+CF +GNDF+PH+P+LE++E A++LL+ VYK
Sbjct: 252 EYLEIELKILDPVCEPDIERLIDDFIFICFLMGNDFIPHIPSLEMKEYALDLLIEVYKTT 311
Query: 262 FRALGGYLTDGSKPS--------LRRVEHFIQAVGSYEDRIFQKRARLHQRHAER----I 309
F +GGY+ + K + R+E F + YE++IF KR L Q ++ +
Sbjct: 312 FNKMGGYIVNIEKVKDKHAAYLEVSRLEIFFHQLSMYEEKIFLKRYELEQESLKKSCRDV 371
Query: 310 KREKAQARR 318
RE +++ R
Sbjct: 372 LREASESER 380
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/274 (33%), Positives = 142/274 (51%), Gaps = 20/274 (7%)
Query: 454 EETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPF 513
EE D +Y EGLCW++ YY V SW W+YP++ APF SDLK +F ISF + P
Sbjct: 394 EERPYDKAQKYLEGLCWMLQYYLADVPSWSWYYPFYVAPFVSDLKSHCRFEISFTVDKPL 453
Query: 514 KPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPF 573
+PF+QL+ V P SS ALPE YRK+M +F + D GKR+ W+ I+
Sbjct: 454 RPFDQLMAVLPLRSSCALPECYRKVMGR-----KEFDHPKLQADTIGKRFLWKCIS---- 504
Query: 574 IDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERV 633
E LL K+++ L+ E RRN+ + +F+ +++ L + QL+
Sbjct: 505 --EEELLQATKELDKELSMHEMRRNTPRQEKIFL----QRNSNAQALAKVIVQLQTSSCS 558
Query: 634 -EVKERLNPELSDGMNGYISPCAGDPHPPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHV 692
E K ++ +S G+ G++SP F SP+ +++DI +Q + A++ P+A +
Sbjct: 559 PEQKLPIDSAIS-GLGGWLSP--DGLSNGFFCSPLQNLQDITNDQAISAMFFNPEAGNPI 615
Query: 693 TRPPAGVIFPKKIVQLEDLKPAPVLWHEDSGRRP 726
R + V P K V D+ +LWH G RP
Sbjct: 616 PRLLSNVKVPDKTVTEADIS-RRLLWHTYPGSRP 648
>gi|115446147|ref|NP_001046853.1| Os02g0481900 [Oryza sativa Japonica Group]
gi|47848619|dbj|BAD22468.1| putative 5'-3' exoribonuclease [Oryza sativa Japonica Group]
gi|113536384|dbj|BAF08767.1| Os02g0481900 [Oryza sativa Japonica Group]
Length = 822
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 144/309 (46%), Positives = 189/309 (61%), Gaps = 56/309 (18%)
Query: 31 REGRKLPPKSDSQ--------VFDSNVITPGTEFMAVLSIALQYYIHLRLNN-DPGWEKI 81
R GR+ S+ + V D NVITPGTEFM +S AL YYI RLN+ DPGW+ I
Sbjct: 107 RRGRRFAWASEEEEMQKISEGVSDPNVITPGTEFMEKISQALTYYIRARLNSSDPGWKHI 166
Query: 82 KVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSIL 141
VILSDANVPGEGEHKIMS++R QR++ GYDPNTRHCL+G DADLIMLALA+HEVHFSIL
Sbjct: 167 MVILSDANVPGEGEHKIMSFIRAQRSMEGYDPNTRHCLFGHDADLIMLALASHEVHFSIL 226
Query: 142 REVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLR 201
RE + E D P+K Y FL+IW LR
Sbjct: 227 RE---------------------------DNSQLTEAD--------PEKQYLFLNIWVLR 251
Query: 202 EYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKE 261
EYL+ E +I +P E D+E ++DDFIF+CF +GNDF+PH+P+LE++E A++LL+ VYK
Sbjct: 252 EYLEIELKILDPVCEPDIERLIDDFIFICFLMGNDFIPHIPSLEMKEYALDLLIEVYKTT 311
Query: 262 FRALGGYLTDGSKPS--------LRRVEHFIQAVGSYEDRIFQKRARLHQRHAER----I 309
F +GGY+ + K + R+E F + YE++IF KR L Q ++ +
Sbjct: 312 FNKMGGYIVNIEKVKDKHAAYLEVSRLEIFFHQLSMYEEKIFLKRYELEQESLKKSCRDV 371
Query: 310 KREKAQARR 318
RE +++ R
Sbjct: 372 LREASESER 380
Score = 175 bits (444), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 113/340 (33%), Positives = 176/340 (51%), Gaps = 34/340 (10%)
Query: 401 KEEFKAKLKELLRDKSDA-------------FNSDNPEEDKVKLGEPGWKERYYEEKFNA 447
+E K +++LR+ S++ FN + P DK++LG PGWK R+Y E F
Sbjct: 361 QESLKKSCRDVLREASESERLELSRKLEDRFFNEERPY-DKLRLGLPGWKSRFYREYFGI 419
Query: 448 KTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISF 507
+T E + D+ +Y EGLCW++ YY V SW W+YP++ APF SDLK +F ISF
Sbjct: 420 ETSNEIGNLQNDMAQKYLEGLCWMLQYYLADVPSWSWYYPFYVAPFVSDLKSNCRFEISF 479
Query: 508 ELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQG 567
+ P +PF+QL+ V P SS ALPE YRK+M +F + D GKR+ W+
Sbjct: 480 TVDKPLRPFDQLMAVLPLRSSCALPECYRKVMGR-----KEFDHPKLQADTIGKRFLWKC 534
Query: 568 IAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQL 627
I+ E LL K+++ L+ E RRN+ + +F+ +++ L + QL
Sbjct: 535 IS------EEELLQATKELDKELSMHEMRRNTPRQEKIFL----QRNSNAQALAKVIVQL 584
Query: 628 KIKERV-EVKERLNPELSDGMNGYISPCAGDPHPPVFRSPVASMEDIMGNQVLCAIYKLP 686
+ E K ++ +S G+ G++SP F SP+ +++DI +Q + A++ P
Sbjct: 585 QTSSCSPEQKLPIDSAIS-GLGGWLSP--DGLSNGFFCSPLQNLQDITNDQAISAMFFNP 641
Query: 687 DAHKHVTRPPAGVIFPKKIVQLEDLKPAPVLWHEDSGRRP 726
+A + R + V P K V D+ +LWH G RP
Sbjct: 642 EAGNPIPRLLSNVKVPDKTVTEADIS-RRLLWHTYPGSRP 680
>gi|444520441|gb|ELV12993.1| 5'-3' exoribonuclease 2 [Tupaia chinensis]
Length = 669
Score = 262 bits (670), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 178/478 (37%), Positives = 256/478 (53%), Gaps = 46/478 (9%)
Query: 179 DEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFL 238
DE D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFL
Sbjct: 69 DELADSLPSAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFL 128
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 298
PH+P+LEIREGAI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 129 PHLPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKR 188
Query: 299 ARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASG--PSPSPYQQSEC 356
R K ++ + +R +P P ++ GSR + G + +P Q +
Sbjct: 189 KDDEDSFRRRQKEKRKRMKRD---QPAFTPGGIL-TPHALGSRNSPGCQVANNPRQAAYE 244
Query: 357 VGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENS-FETDPQENKEEFKAKLKELLRDK 415
+ +N + S + +G +A++S E +P++N ++A K+ R
Sbjct: 245 MRMQNNSSPSVSPNVSFSSDGSPSPLGGIKRKADDSDSEPEPEDNVRLWEAGWKQ--RYY 302
Query: 416 SDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYY 475
+ F+ D + EKF K + E V+ Y +G
Sbjct: 303 KNKFDVDAAD-----------------EKFRRKVVQSYVEGLCWVLRYYYQG-------- 337
Query: 476 YEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEH 534
SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP
Sbjct: 338 ---CASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPS 394
Query: 535 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 594
+RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE
Sbjct: 395 WRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEE 454
Query: 595 ARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYIS 652
RRNS+ D+LFV HPL I L Q E V+V PEL G+ G S
Sbjct: 455 TRRNSLGGDVLFVGKHHPLHDFISEL----YQTGSTEPVDVP----PELCHGIQGKFS 504
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Query: 17 DSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDP 76
++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L+ L+YYI RLNNDP
Sbjct: 2 EAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP 61
Query: 77 GWEKIK-VILSDANVPGEGEHKIMSYVRLQRNL 108
GW+ + L+D+ EGE + L+ L
Sbjct: 62 GWKNLTHDELADSLPSAEGEFIFLRLNVLREYL 94
>gi|407040013|gb|EKE39937.1| 5'-3' exonuclease domain containing protein [Entamoeba nuttalli
P19]
Length = 560
Score = 262 bits (669), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 145/311 (46%), Positives = 197/311 (63%), Gaps = 25/311 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRK---LPPKSDSQVFDSNVITPGTEFM 57
MNQQRSRRF+++KDA E LRQ + + R LP + DSN ITPGTEFM
Sbjct: 105 MNQQRSRRFKSAKDA-----ENAELRQAEDNKKRLMNGLPEVPYVKPLDSNCITPGTEFM 159
Query: 58 AVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRH 117
+V+S L+ YI R++ W K+ VILSD+ VPGEGEHKIM ++R Q+ P Y+PNT H
Sbjct: 160 SVVSKTLKKYIKERMSQSSYWNKLVVILSDSGVPGEGEHKIMDFIRRQKESPDYNPNTHH 219
Query: 118 CLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGE 177
C+YGLDADLIML+LATHE FSI+RE VF + D+C++C H C+ +++ G
Sbjct: 220 CMYGLDADLIMLSLATHERFFSIIREKVFF--EDDRCYICNGV-HPPDKCQ--RRKEVGA 274
Query: 178 FDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDF 237
D KP+QFLH LR YL ++ FE C VDDFIF CF VGNDF
Sbjct: 275 MD-------TIIKPFQFLHCHILRGYLQITLKVEGFEFE---RC-VDDFIFFCFLVGNDF 323
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
LPH+P+L+IR+GA++LLM VY +EF GGY+T+ ++ ++F+Q VG E I +K
Sbjct: 324 LPHIPSLDIRDGAVDLLMKVY-REFLPHGGYITESGSLNVTNAKNFLQEVGKEEPAILEK 382
Query: 298 RARLHQRHAER 308
+ + + +A++
Sbjct: 383 KCQKEKMNAKK 393
>gi|403218305|emb|CCK72796.1| hypothetical protein KNAG_0L01770 [Kazachstania naganishii CBS
8797]
Length = 1003
Score = 260 bits (665), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 143/333 (42%), Positives = 201/333 (60%), Gaps = 26/333 (7%)
Query: 1 MNQQRSRRFRASKDA-ADSAAEEERLRQEFEREGRKLPPKSDSQ-VFDSNVITPGTEFMA 58
MNQQR+RR +KDA + +EE LR+ E G + ++ +DSN ITPGT FM
Sbjct: 110 MNQQRARRLGLAKDAELQNEKKEEELRKR-EHYGEVIDDSVKAKKTWDSNAITPGTPFMD 168
Query: 59 VLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHC 118
L++AL+Y+ +L DPGW+ ++V++SDA VPGEGEHKIM+++R QR P Y+PNT HC
Sbjct: 169 KLALALRYWTAFKLATDPGWKNLQVVISDATVPGEGEHKIMNFIRSQRADPEYNPNTSHC 228
Query: 119 LYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEF 178
+YGLDADLI L LATHE HF ILRE VF Q+ K K A
Sbjct: 229 IYGLDADLIFLGLATHEPHFKILREDVF--AQEYKS--------------SKRDIDANNM 272
Query: 179 DEKGDEVVVPK---KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGN 235
E+ ++++ + KP+ +LHI LREYL E +P PF DLE +DD++FMCFF GN
Sbjct: 273 TEEERQILLKRDAEKPFLWLHIGILREYLAAELFVPRLPFAFDLERAIDDWVFMCFFCGN 332
Query: 236 DFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 295
DFLPH+P L++RE +I++L+ ++KK ++ Y+T + +L VE ++ +G+ E IF
Sbjct: 333 DFLPHLPCLDVRENSIDILLDIWKKVLPSMKTYMTCDGQLNLASVEVVLRQLGAREPDIF 392
Query: 296 QKRARLHQRHAERI----KREKAQARRGDDVEP 324
Q + QR+ R KR +G D P
Sbjct: 393 QTKYIQTQRNEARYRQNNKRNGKNVSKGQDRHP 425
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 96/182 (52%), Positives = 127/182 (69%), Gaps = 1/182 (0%)
Query: 426 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 485
+D V+L E G+KERYY KFN + ++ E RKD+V Y EG+ WV+ YYY+G SW W+
Sbjct: 591 DDTVRLHESGYKERYYTGKFNI-SKDQIEPLRKDMVKSYIEGVSWVLLYYYQGCPSWNWY 649
Query: 486 YPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 545
YPYHYAPFA+D D++ + F+ G PF P+ QL+ V P+AS H LP +R LM+D +SP
Sbjct: 650 YPYHYAPFAADFFDINDIKVEFKQGEPFLPYEQLMSVLPAASGHTLPPIFRPLMSDVDSP 709
Query: 546 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 605
I DFYP +F++DMNGK+ SWQGIA LPFIDE RLL+ V+ L+EEE RN D+L
Sbjct: 710 IIDFYPQEFKIDMNGKKMSWQGIALLPFIDEKRLLETVRAQYPKLSEEERARNCRNEDIL 769
Query: 606 FV 607
+
Sbjct: 770 LI 771
>gi|342184282|emb|CCC93763.1| putative 5'-3' exoribonuclease 2 [Trypanosoma congolense IL3000]
Length = 785
Score = 258 bits (660), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 193/627 (30%), Positives = 283/627 (45%), Gaps = 120/627 (19%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA++++ +S E ++G LP +D NVITP T FM L
Sbjct: 109 MNQQRSRRFRAAEESVESGRLSAECLAELRKKG--LPEPDIRPRWDHNVITPATPFMERL 166
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+A++++I +LN DP W KI V+ SDA+V GEGEHKIM Y+R R PGYDPNT H +Y
Sbjct: 167 GLAVEWFILKKLNEDPAWGKIVVVFSDAHVAGEGEHKIMQYIRGLRVQPGYDPNTSHVIY 226
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G+DADLI L L THE + +ILR ++
Sbjct: 227 GMDADLICLGLITHERNVTILR------------------------------------NQ 250
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + + HI RE L F + ++LE I+DDF+F+CFFVGNDFLPH
Sbjct: 251 LTDSFQAAHNAFCYFHIAEYRECLRKSFLALS---GMNLERIIDDFVFLCFFVGNDFLPH 307
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQA-VGSYEDRIFQKRA 299
+P + ++ + +L+ Y +E YLT+ + + + F++ V +Y +++ ++ A
Sbjct: 308 IPLISLKAKGLEMLLNHYVEEL-CNTSYLTNKGEVNFAVLPGFLERFVANYMNQLKREYA 366
Query: 300 RLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGR 359
+ R +A+ R + +E Q ++ V +
Sbjct: 367 IMWG------MRSRAKCRVKESLE---QCNAGVKAA------------------------ 393
Query: 360 LDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAF 419
L + K K+ + G + AA + + F + L SD
Sbjct: 394 LGDLKPDRSNAQKISNVVYGLLLSAA-------------KERARFVGGKEPLGFSYSDEN 440
Query: 420 NSDNPEEDKVKLGEPGW---KERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYY 476
D E K GW R +E+K E T+ V+RY Y
Sbjct: 441 FRDKYYETKF-----GWDPSNRRKFEKKIARCCAEYYRGTQW--VMRY----------YT 483
Query: 477 EGVCSWQWFYPYHYAPFASDLKDLD-QFNISFELGHPFKPFNQLLGVFPSASSHALPEHY 535
G SW+WFYPY+YAP DL N+ LG P P QLL V P S LPE
Sbjct: 484 VGCPSWEWFYPYYYAPLLEDLAAFSGTVNVEMHLGVPRHPVVQLLAVLPRLSVKGLPEPL 543
Query: 536 RKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEA 595
+ DP+S + +FYP +VD + +S+QG+ KLPFID +L + TL E
Sbjct: 544 HNAVLDPDSVLGEFYPDTIDVDHSEANFSYQGVLKLPFIDSEKL----QAACQTLVELVP 599
Query: 596 RRNSIMADMLFVLLSHPLSASIYTLDE 622
R + +++ H +S L+E
Sbjct: 600 DRGVV------IVMCHKMSELSLYLEE 620
>gi|410078313|ref|XP_003956738.1| hypothetical protein KAFR_0C06110 [Kazachstania africana CBS 2517]
gi|372463322|emb|CCF57603.1| hypothetical protein KAFR_0C06110 [Kazachstania africana CBS 2517]
Length = 1039
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 137/319 (42%), Positives = 190/319 (59%), Gaps = 22/319 (6%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPK-SDSQVFDSNVITPGTEFMAV 59
MNQQR+RRFR+++DA + E +E E G + + +DSN ITPGT FM
Sbjct: 110 MNQQRARRFRSARDAQIANEAREEELRERENYGEIIDDALKKKKTWDSNAITPGTPFMDK 169
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
L+ AL+Y+ +L DPGW+ ++VI+SDA VPGEGEHKIM+++R QR P Y+PNT HC+
Sbjct: 170 LAAALRYWTAFKLATDPGWKNLQVIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCI 229
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
YGLDADLI L LATHE HF ILRE VF + + +
Sbjct: 230 YGLDADLIFLGLATHEPHFKILREDVFAQDNRKRTTF------------------SDNMS 271
Query: 180 EKGDEVVVPK---KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGND 236
E+ E+++ K KP+ +LHI LREYL E IP F DLE +DD++FMCFF GND
Sbjct: 272 EEEKELIMKKDAEKPFLWLHISVLREYLAAELWIPRLSFNFDLERAIDDWVFMCFFCGND 331
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLPH+P+L++RE +I++L+ ++K +L Y+T +L VE ++ +G E IF+
Sbjct: 332 FLPHLPSLDVRENSIDILLDIWKVILPSLKTYMTCDGFLNLESVEILLKQLGDREPDIFK 391
Query: 297 KRARLHQRHAERIKREKAQ 315
R R E +R + Q
Sbjct: 392 TRYIQEVRKQEAFERRRLQ 410
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 112/278 (40%), Positives = 159/278 (57%), Gaps = 20/278 (7%)
Query: 426 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 485
+D VKL E G++ERYY EKF+ + +E E R+D+V Y EG+ WV+ YYY+G SW W+
Sbjct: 604 DDNVKLYESGYRERYYTEKFHI-SKDEIEIVRRDMVRSYVEGVSWVLRYYYQGCASWNWY 662
Query: 486 YPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 545
YP+HYAPFASD D+ + F+LG PF P+ QL+ V P+AS H LP +R LM++ +SP
Sbjct: 663 YPFHYAPFASDFFDIKDIKVEFDLGEPFLPYEQLMSVLPAASGHTLPPIFRPLMSEADSP 722
Query: 546 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 605
I DFYP +F +DMNGK+ SWQGIA LPFIDE RLL+ V+ L++ E RN +L
Sbjct: 723 IIDFYPPEFPIDMNGKKMSWQGIALLPFIDEKRLLEVVRAQYPKLSDAERSRNVRKEAIL 782
Query: 606 FV----LLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYIS-PCAGDPHP 660
+ + S +Y ++ +IK R G++G +S G
Sbjct: 783 LISNKNVNYEKFSKKLYQSEDLADDFEIKFR---------HFKSGLSGIVSIDEEGFKLN 833
Query: 661 PVFRSPV--ASMEDIMGNQVLCAIYK---LPDAHKHVT 693
P+ S+ ++ N L A++K LP +K V
Sbjct: 834 SKLLCPLESTSLPELSTNLFLKALFKFTPLPANNKSVI 871
>gi|157876822|ref|XP_001686753.1| putative exoribonuclease 2 [Leishmania major strain Friedlin]
gi|68129828|emb|CAJ09134.1| putative exoribonuclease 2 [Leishmania major strain Friedlin]
Length = 895
Score = 256 bits (655), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 183/603 (30%), Positives = 264/603 (43%), Gaps = 132/603 (21%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+ + +S A E LP + +D NVITP T FM +
Sbjct: 109 MNQQRSRRFRAADERLESDAISNACADSIVSE-YHLPRPRVRERWDHNVITPSTAFMERV 167
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
++AL++YI +LN D W + V+ SDA+VPGEGEHKIM Y+R R+ PGYD NT H ++
Sbjct: 168 ALALEWYIMKKLNEDAAWRHLTVVFSDAHVPGEGEHKIMQYIRGLRSQPGYDYNTSHVIH 227
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G+DADLI L L+THE H ILR + Q D C
Sbjct: 228 GMDADLICLGLSTHEKHVCILRNQLTETFQPDHNRFC----------------------- 264
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEF-RIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
+ ++ T RE L +F I FE +VDDFIF+CFFVGNDFLP
Sbjct: 265 -------------YFNLSTYREKLMQDFANIEGMQFER----VVDDFIFLCFFVGNDFLP 307
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDR------ 293
H+P + I+ I +L+ Y ++F AL GYLT + + F+ S
Sbjct: 308 HVPLVSIKTRGIEMLLDHYVRDF-ALHGYLTQLGEVDYAHLHIFLMNFTSKCMMKLTKEY 366
Query: 294 --IFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPY 351
+ + + R Q ER+ + +AQ VS G+ L P S
Sbjct: 367 YGVVRAKERAKQHVEERVTKTEAQ------------------VSEVLGTLL---PDRSNA 405
Query: 352 QQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEA-------ENSFETDPQENKEEF 404
Q+ V G +S R + + +G + ++ ++ F DP N+ F
Sbjct: 406 QE---VSDALLGLMSSARKERTRFVVDKQPLGFSYLDKTYRDAYYQHKFGWDPSTNRAAF 462
Query: 405 KAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRY 464
+++++ + L W RYY
Sbjct: 463 ESQIRLCCAE---------------YLRGMQWVMRYYT---------------------- 485
Query: 465 TEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLD-QFNISFELGHPFKPFNQLLGVF 523
+G SW+W++PYHYAP DL N+ + P P QLL V
Sbjct: 486 ------------KGCPSWEWYFPYHYAPLLQDLAAFTATVNVEMRMSAPLHPVEQLLAVL 533
Query: 524 PSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEV 583
P S HALPE + + DP S + FYP +VD + +S+QG+ ++PFI+ L
Sbjct: 534 PRLSVHALPEELHEAVNDPKSVLGKFYPAIVDVDFSEANFSYQGVLRIPFINCEALSKAC 593
Query: 584 KKI 586
+++
Sbjct: 594 RQL 596
>gi|213405427|ref|XP_002173485.1| 5'-3' exoribonuclease [Schizosaccharomyces japonicus yFS275]
gi|212001532|gb|EEB07192.1| 5'-3' exoribonuclease [Schizosaccharomyces japonicus yFS275]
Length = 963
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 143/314 (45%), Positives = 195/314 (62%), Gaps = 13/314 (4%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKS-DSQVFDSNVITPGTEFMAV 59
MNQQRSRRFR++++AA AA E +E + +G + + + +DSN ITPGT FM +
Sbjct: 111 MNQQRSRRFRSAREAAQKAAALEECVREAKEKGIPVDENAAKKKAWDSNCITPGTPFMDI 170
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
L+ AL+YYI +LN +P ++ ++ +LSDA+VPGEGEHKIM ++R QR P YDPNTRH +
Sbjct: 171 LAKALRYYITHKLNTEPAFKNLRFLLSDASVPGEGEHKIMEFIRSQRVNPEYDPNTRHVI 230
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
YGLDADLIML LATHE HF +LRE VF + Q G L E KA
Sbjct: 231 YGLDADLIMLGLATHEPHFRVLREDVFFQQGSTRRSKKEQLG-LVPKIEATEAPKAPV-- 287
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
KKP+ +L++ LREYL+ E ++PN PF DLE +DD++F FFVGNDFLP
Sbjct: 288 ---------KKPFIWLNVDILREYLEIELQVPNLPFPFDLERAIDDWVFFIFFVGNDFLP 338
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+L+IR+GA+ L ++ +GGYLT +L R E + +G ED IF++
Sbjct: 339 HLPSLDIRDGALERLTEAWRLCLPHMGGYLTLDGSVNLSRAEVILSVIGDQEDEIFRRLK 398
Query: 300 RLHQRHAERIKREK 313
+ R E KR +
Sbjct: 399 QNEDRRNENQKRRR 412
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 128/296 (43%), Positives = 183/296 (61%), Gaps = 17/296 (5%)
Query: 425 EEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQW 484
E D V+L EPG++ERYY +KF+ + E EE ++ V Y +GLCWV+ YYY+G SW W
Sbjct: 579 EGDTVRLWEPGYRERYYTQKFHFE--ENNEEQIREAVYHYVKGLCWVLLYYYQGCPSWTW 636
Query: 485 FYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNS 544
+YP+HYAPFA+D K+L ISF+L PFKP+ QLLGV P+AS LPE +KLMTDP+S
Sbjct: 637 YYPFHYAPFAADFKNLSSLKISFDLNQPFKPYEQLLGVLPAASKENLPEKLQKLMTDPDS 696
Query: 545 PISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADM 604
I DFYP +F +D+NGK++ WQG+A LPFIDE RLLD V K+ LTEEE+RRN+ +
Sbjct: 697 EIIDFYPENFVIDLNGKKFEWQGVALLPFIDEKRLLDAVAKVYPELTEEESRRNTQGPPL 756
Query: 605 LFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYIS------PCAGDP 658
LF HP+ +E K L K+R +L+ + + G+ G +S P P
Sbjct: 757 LFFSEKHPM------YNEVVKHLYSKKRQGKPVKLSGKRAHGIFGKVSSNPAVVPNVSVP 810
Query: 659 HPPVFRSPVASME--DIMGNQVLCAIYKLPDAH-KHVTRPPAGVIFPKKIVQLEDL 711
P + A + ++ + +C +Y+LP +H H + GV P +++ ++D+
Sbjct: 811 CPLELKDESARNKYGEVQNDTSMCVLYQLPRSHYVHKSMLLRGVNMPPRVLTMDDV 866
>gi|296084855|emb|CBI28264.3| unnamed protein product [Vitis vinifera]
Length = 525
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 148/316 (46%), Positives = 190/316 (60%), Gaps = 47/316 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRF+ +KD + AEE+RLR++FE EG+ L PK +SQV D N+ITPGT FM +
Sbjct: 102 MNQQRRRRFQTAKDNEIAEAEEQRLRRQFEMEGKPLVPKQESQVSDPNIITPGTVFMHEV 161
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S ALQ YI R+ ++ GW+ +KVILSD+NVPGEGEHKIMS++RLQR+LP Y+PNT HCLY
Sbjct: 162 SKALQQYICSRMKHEAGWKDLKVILSDSNVPGEGEHKIMSFIRLQRSLPDYNPNTLHCLY 221
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKC--FLCGQPGHLAANCEGKAKR----- 173
GLDADLIMLALATHEVHFSILRE V T Q+ C + + AN R
Sbjct: 222 GLDADLIMLALATHEVHFSILREDVLTLEQRGSCESAVETKTSPPKANSSLVKSRGWFKQ 281
Query: 174 -----KAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPP---FEIDLECIVDD 225
K F + + K PYQFLH+W LREYL+ + +I +PP EI+ E I
Sbjct: 282 VLTVDKTNSFIKNLESKSSIKMPYQFLHVWILREYLELDMKISDPPEKLKEINFERIR-- 339
Query: 226 FIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQ 285
+ C+ V M +E ++G+ L+RVE FI
Sbjct: 340 -CYECYMVD------MERIEEKKGSF-----------------------VKLKRVEKFIL 369
Query: 286 AVGSYEDRIFQKRARL 301
VG+YE++IF+KR L
Sbjct: 370 LVGTYEEKIFKKRMAL 385
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/123 (56%), Positives = 88/123 (71%)
Query: 402 EEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVV 461
+E K +LKE +R KSD + S + D+V+LG PGWKERYY+EK + T + E TRK++V
Sbjct: 400 KEMKKRLKENIRAKSDLWRSGSLGIDRVRLGHPGWKERYYKEKCSCDTSQGIESTRKELV 459
Query: 462 LRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLG 521
+YTEGL WV+ YY+ GV SW WFYPYHY PFASD K L + FE G PFKPF+QL+G
Sbjct: 460 QKYTEGLLWVLQYYFSGVPSWTWFYPYHYGPFASDFKGLSRVKGKFERGSPFKPFDQLMG 519
Query: 522 VFP 524
V P
Sbjct: 520 VLP 522
>gi|296423651|ref|XP_002841367.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637604|emb|CAZ85558.1| unnamed protein product [Tuber melanosporum]
Length = 883
Score = 253 bits (645), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 139/324 (42%), Positives = 187/324 (57%), Gaps = 52/324 (16%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPK-SDSQVFDSNVITPGTEFMAV 59
MNQQRSRRFR++++A + E +L ++ E+ G K + +++DSN ITPGT FM +
Sbjct: 110 MNQQRSRRFRSAQEAKEKEDETAQLIEQMEKHGSKFDDVIKNKKIWDSNAITPGTPFMDI 169
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
L+ +L+Y+I +LN+DP W K+K+I+SD+ VPGEGEHKIM ++R QR P YDPNTRH +
Sbjct: 170 LAASLKYWIAKKLNDDPAWAKLKIIISDSTVPGEGEHKIMEFIRSQRLSPEYDPNTRHVI 229
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
YGLDADLIML L THE HF +LRE VF E +AK
Sbjct: 230 YGLDADLIMLGLGTHEPHFKVLREDVFAK-------------------EARAK------- 263
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
T R Y P PF +LE +DD+IFMCFFVGNDFLP
Sbjct: 264 -------------------TCRIY----NASPLKPF-FELERALDDWIFMCFFVGNDFLP 299
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIRE I+ L+AV+K +GGY+T L+RV++ + + ED+IF+ R
Sbjct: 300 HLPSLEIRENGIDTLIAVWKDNIPLMGGYVTKDGTVDLKRVQYILDGLAKQEDQIFRNRK 359
Query: 300 RLHQRHAERIK-REKAQARRGDDV 322
R A I + KA GD+
Sbjct: 360 RTISTTAPAISHKRKADMVWGDET 383
Score = 242 bits (617), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 124/277 (44%), Positives = 175/277 (63%), Gaps = 13/277 (4%)
Query: 421 SDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVC 480
+D+P+ D V+L EPG++ERYYE+KF+ + E R V Y EGLCWV+ YY++G
Sbjct: 393 ADDPDRDPVRLWEPGYRERYYEQKFHVSP--DNVEFRNKVAASYVEGLCWVLLYYFQGCP 450
Query: 481 SWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMT 540
SW W+YPYHYAPFA D D+ + +I F+ G PFKPF QL+GV P+AS HALPE ++KLMT
Sbjct: 451 SWTWYYPYHYAPFAQDFNDVGKLDIQFKKGKPFKPFEQLMGVLPAASKHALPEPFQKLMT 510
Query: 541 DPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSI 600
+ +S I DFYP F +D+NGK+++WQG+A LPFIDE RLLD V K+ TLT E+ RN++
Sbjct: 511 EEDSEIIDFYPESFPIDLNGKKFAWQGVALLPFIDEKRLLDAVSKVYPTLTPEDDARNAM 570
Query: 601 MADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNG-YISPCAGDPH 659
D+LF + + + D+ + K R + + L+P S G++G I A P
Sbjct: 571 GHDLLFCSVENDM------YDDVAIRFYYKGRSDDEYDLDPTKSQGLSGKVIKDPAFIPQ 624
Query: 660 PPV-FRSPVASMEDIMGNQVLCAIYKLP---DAHKHV 692
+ F + M I G++ LC Y+ P +AHK +
Sbjct: 625 GTIPFPLSLEDMPKIEGDKSLCVFYEFPKTKNAHKSM 661
>gi|62913987|gb|AAH06417.2| XRN2 protein, partial [Homo sapiens]
Length = 580
Score = 250 bits (639), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 170/453 (37%), Positives = 235/453 (51%), Gaps = 60/453 (13%)
Query: 266 GGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARRGDDVEPL 325
GGYLT+ +L+RV+ + AVG ED IF+KR R K ++ + +R +P
Sbjct: 5 GGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQKEKRKRMKRD---QPA 61
Query: 326 AQPDSLVPVSRFH-----GSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGA 380
P ++ GS++AS P + Y+ R+ N S P+
Sbjct: 62 FTPSGILTPHALGSRNSPGSQVASNPRQAAYEM-----RMQNNSSPSISPN--------- 107
Query: 381 TIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERY 440
SF +D + L + R D+ + PE D V+L E GWK+RY
Sbjct: 108 ----------TSFTSDGS------PSPLGGIKRKAEDSDSEPEPE-DNVRLWEAGWKQRY 150
Query: 441 YEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDL 500
Y+ KF+ +E+ R+ VV Y EGLCWV+ YYY+G SW+W+YP+HYAPFASD + +
Sbjct: 151 YKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGI 208
Query: 501 DQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMN 559
FE G PFKP QL+GVFP+AS + LP +RKLM+DP+S I DFYP DF +D+N
Sbjct: 209 ADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLN 268
Query: 560 GKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYT 619
GK+Y+WQG+A LPF+DE RL ++++ LT EE RRNS+ D+LFV HPL I
Sbjct: 269 GKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFVGKHHPLHDFILE 328
Query: 620 LDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPP-VFRSPVASMEDIMGNQV 678
L Q E VEV PEL G+ G S P + SPV + D+ N V
Sbjct: 329 L----YQTGSTEPVEVP----PELCHGIQGKFSLDEEAILPDQIVCSPVPMLRDLTQNTV 380
Query: 679 LCAIYKLPD-AHKHV--------TRPPAGVIFP 702
+ +K P A ++ R PA V+ P
Sbjct: 381 VSINFKDPQFAEDYIFKAVMLPGARKPAAVLKP 413
>gi|308805328|ref|XP_003079976.1| 5'-3' exoribonuclease 1 (ISS) [Ostreococcus tauri]
gi|116058433|emb|CAL53622.1| 5'-3' exoribonuclease 1 (ISS) [Ostreococcus tauri]
Length = 1418
Score = 248 bits (634), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 144/325 (44%), Positives = 185/325 (56%), Gaps = 43/325 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR SA+E + R+E R G P+ + + FDSN ITPGTEFMA L
Sbjct: 167 MNQQRSRRFR-------SASEAAKDREEARRRGE---PEPEGEPFDSNCITPGTEFMARL 216
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L++Y+ + DP W K+ VILS V GEGEHKIM ++R R PG++PN HCLY
Sbjct: 217 TEHLKFYVRKKQTEDPLWAKVTVILSGHEVRGEGEHKIMEHIRWARTQPGWEPNQTHCLY 276
Query: 121 GLDADLIMLALATHEVHFSILREVV-FTPGQQDKCFLCGQPG-HLAANCEGKAKRKAGEF 178
GLDADLIMLAL THE HF +LREVV F G++ GQP + +N
Sbjct: 277 GLDADLIMLALVTHEPHFCLLREVVKFGGGEK------GQPSREILSNPTDDG------- 323
Query: 179 DEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFL 238
+ LHI LREYLD EFR N F DLE ++DDFI +C VGNDFL
Sbjct: 324 -------------FILLHIGLLREYLDLEFREKNLSFGYDLERVIDDFILLCMLVGNDFL 370
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLT---DGSKPSLRRVEHFIQAVGSYEDRIF 295
P +PTL I EGA+N L VY LGGY+T G + R+E + + ++E ++
Sbjct: 371 PALPTLNIAEGALNTLFKVYHDTLPMLGGYITGDEGGGTFNAERLEKIMSIMSTFERQVL 430
Query: 296 QKRARLHQRHAERIKREKAQARRGD 320
+ RA ++ E K+ + R GD
Sbjct: 431 EDRALDVEKEEE--KKARRNKRFGD 453
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/171 (46%), Positives = 102/171 (59%), Gaps = 8/171 (4%)
Query: 432 GEPGWKERYYEEKFNAKTPEER--EETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYH 489
G WK++YY EK K E E R+ Y +GL WV+ YYY GV SW W+YPYH
Sbjct: 503 GLQAWKDQYYREKLGLKMGEAAPLAEIRQ----AYFDGLNWVLRYYYRGVASWTWYYPYH 558
Query: 490 YAPFASDL-KDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISD 548
YAP ASDL +++ F+ G PF+PF QL+ V P +SS LPE +R M DP SP+++
Sbjct: 559 YAPMASDLCAGMEKLTSEFDYGEPFRPFEQLMAVQPPSSSKLLPEPFRHFMEDPRSPLAE 618
Query: 549 FYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHT-LTEEEARRN 598
F+P D VD GKR W+G+ LPF+D RL V +E + LT E RN
Sbjct: 619 FFPEDIPVDFEGKRNDWEGVVLLPFLDADRLKAAVASVEDSQLTAGEIARN 669
>gi|145505349|ref|XP_001438641.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405813|emb|CAK71244.1| unnamed protein product [Paramecium tetraurelia]
Length = 773
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 134/337 (39%), Positives = 204/337 (60%), Gaps = 17/337 (5%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSD--SQVFDSNVITPGTEFMA 58
+NQQRSRRFRA++++ E+ERLR + +G + + FDSN ITPGTEFM
Sbjct: 101 LNQQRSRRFRAAQESIRIQKEKERLRDYWRTQGLNSDALNTYIEKNFDSNQITPGTEFMQ 160
Query: 59 VLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHC 118
L+IALQYYI+ R+NN+P + + +I +D+++PGEGEHKI+ +VR QR Y RHC
Sbjct: 161 KLNIALQYYIYDRMNNNPLFRNVLIIFNDSSIPGEGEHKILQFVRDQRRQMNY-KTVRHC 219
Query: 119 LYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEF 178
LYG DADLIML L+THE +F ++RE + +C +C Q GH +C+ + K+
Sbjct: 220 LYGADADLIMLGLSTHEPYFYVIRETIMA-NDDKQCSICQQKGHFFTDCKKREKQYNQIQ 278
Query: 179 DEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPF--EIDLECIVDDFIFMCFFVGND 236
++ ++++ + +Q L + +RE+L +E R + DLE I+DDF+FMCF VGND
Sbjct: 279 QQQKNKLI--QVDFQILQLNIVREFLYFETRDLQASLKGQYDLERIIDDFVFMCFLVGND 336
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLPH+P L+I EG I+ L+ +YK +G YLT+ + +L+++ F+ VG ED + +
Sbjct: 337 FLPHIPCLKITEGGIDCLLIIYKTILSQIGDYLTNCGELNLQQMNQFLFHVGLIEDELIK 396
Query: 297 KRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVP 333
+ + K+E + RR + E Q + P
Sbjct: 397 GQEK---------KKEIVKNRRERNAEMKEQKVLMAP 424
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 101/280 (36%), Positives = 148/280 (52%), Gaps = 28/280 (10%)
Query: 401 KEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDV 460
K K KL E+ + + D S ++ K +K+RYY+EKF K P + E + +
Sbjct: 440 KSALKDKLTEINQQEIDQAQSAKSSQELKKWKAVSYKQRYYQEKFGIK-PAQFNEFQHRI 498
Query: 461 VLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLL 520
+ Y E L W + YYY+G W WFYPYHYAPFA DL +LDQ F L PFKP+ QLL
Sbjct: 499 KISYLEALAWTLKYYYQGCVDWGWFYPYHYAPFAQDLTNLDQCLFEFSLNTPFKPYQQLL 558
Query: 521 GVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLL 580
V P S+ LP Y++LM + +SPI+DFYPTDF VD+ GK+++W G LPF+D RL+
Sbjct: 559 AVLPPQSAQFLPRPYQQLMLETSSPIADFYPTDFVVDLKGKKFAWLGEVVLPFVDADRLI 618
Query: 581 DEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLN 640
+ I +L++ E R+ + ++F L H + +Q I+ +V+ R
Sbjct: 619 -KASNIGVSLSKLEQERDRLGQTLIFSLKKHE--------SFNFQQCHIQVQVDWLPRF- 668
Query: 641 PELSDGMNGYISPCAGDPHPPVFRSPVASMEDIMGNQVLC 680
P +SP+ +M +I NQ++C
Sbjct: 669 -----------------PVGSEIKSPIPTMGNIFNNQIIC 691
>gi|221482303|gb|EEE20658.1| 5'->3' exoribonuclease, putative [Toxoplasma gondii GT1]
Length = 1239
Score = 246 bits (628), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 143/345 (41%), Positives = 192/345 (55%), Gaps = 32/345 (9%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRF+A+KD + LR +FE EGR++PPK +DSNVITPGT FM L
Sbjct: 133 MNQQRSRRFKAAKDIQEEEKAYAELRAQFESEGREVPPKK--MRWDSNVITPGTPFMHRL 190
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ AL YYI RL + W+ ++VI SDA VPGEGEHKIM ++R QR + PN RH L+
Sbjct: 191 ADALTYYIQDRLATNENWKGLRVIFSDATVPGEGEHKIMDFIRQQRKSGEFCPNLRHVLH 250
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKA----- 175
G DADLIML LATHE +FSILRE V + C CG GH A NC + +A
Sbjct: 251 GADADLIMLGLATHEANFSILREAVVDRTPEQVCSACGAVGHSAENCPASSSVQAPDDRA 310
Query: 176 ---GEFDEKGDEVVVPK--------------------KPYQFLHIWTLREYLDYEFRIPN 212
E D++G + + KP Q L + LREYL YEF
Sbjct: 311 FRVFEQDKRGLKRHLEARGVELREDWATGLESHRRAWKPLQMLQLPVLREYLAYEFITSQ 370
Query: 213 PPFE-IDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVY-KKEFRALGGYLT 270
+ DLE +DDF+F+CF GNDFLPH+P I+ G+I+ L+ +Y + + L YLT
Sbjct: 371 EEGQSFDLERCIDDFVFLCFLCGNDFLPHLPHQSIQRGSIDALVQLYLQLRPQVLTDYLT 430
Query: 271 DGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQ 315
+ +L + F+ + E + ++ + R ER +++K Q
Sbjct: 431 REGRVNLPELYTFLHHLAIVEKEVVRRDLQRKSRMRERTEQQKQQ 475
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/263 (38%), Positives = 134/263 (50%), Gaps = 52/263 (19%)
Query: 404 FKAKLKELLRDKSDAFNSDNPEEDKVKLG-----EPGWKERYYEEKFNAKTPEER---EE 455
FKAKL + L + D D +D+V G W+++YY +KF+ +R E+
Sbjct: 643 FKAKLSQKLNREIDG---DTLLKDEVDGGVGCPDRATWRQKYYRQKFHLPAESDRKDVEQ 699
Query: 456 TRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKD-------LD------- 501
DV L Y GL WV+ YYY+G S+ WF+P+HYAP A DL D LD
Sbjct: 700 LASDVALAYIVGLQWVLLYYYQGCNSFDWFFPFHYAPLAVDLADELQRRLKLDDQKEERE 759
Query: 502 ---------------------------QFNISFELGHPFKPFNQLLGVFPSASSHALPEH 534
F ISF LG PF+ F QL+ V P S+ LP
Sbjct: 760 RRGSALGSVQGLPRCGHSRGVSLGQDGNFEISFTLGTPFRAFEQLMAVLPPYSASCLPRE 819
Query: 535 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 594
+ +M +P S I+DFYP+D ++D NGKR+ WQ + LPFIDE RLL K +E LT EE
Sbjct: 820 HAAVMMNPRSAIADFYPSDVKMDPNGKRHQWQWVVLLPFIDENRLLRTCKPLEKFLTLEE 879
Query: 595 ARRNSIMADMLFVLLSHPLSASI 617
RN +D L+V SHPL+ ++
Sbjct: 880 RERNRRGSDRLYVHRSHPLARTL 902
>gi|221502801|gb|EEE28515.1| 5'->3' exoribonuclease, putative [Toxoplasma gondii VEG]
Length = 1239
Score = 246 bits (628), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 143/345 (41%), Positives = 192/345 (55%), Gaps = 32/345 (9%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRF+A+KD + LR +FE EGR++PPK +DSNVITPGT FM L
Sbjct: 133 MNQQRSRRFKAAKDIQEEEKAYAELRAQFESEGREVPPKK--MRWDSNVITPGTPFMHRL 190
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ AL YYI RL + W+ ++VI SDA VPGEGEHKIM ++R QR + PN RH L+
Sbjct: 191 ADALTYYIQDRLATNENWKGLRVIFSDATVPGEGEHKIMDFIRQQRKSGEFCPNLRHVLH 250
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKA----- 175
G DADLIML LATHE +FSILRE V + C CG GH A NC + +A
Sbjct: 251 GADADLIMLGLATHEANFSILREAVVDRTPEQVCSACGAVGHSAENCPASSSVQAPDDRA 310
Query: 176 ---GEFDEKGDEVVVPK--------------------KPYQFLHIWTLREYLDYEFRIPN 212
E D++G + + KP Q L + LREYL YEF
Sbjct: 311 FRVFEQDKRGLKRHLEARGVELREDWDTGLESHRRAWKPLQMLQLPVLREYLAYEFITSQ 370
Query: 213 PPFE-IDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVY-KKEFRALGGYLT 270
+ DLE +DDF+F+CF GNDFLPH+P I+ G+I+ L+ +Y + + L YLT
Sbjct: 371 EEGQSFDLERCIDDFVFLCFLCGNDFLPHLPHQSIQRGSIDALVQLYLQLRPQVLTDYLT 430
Query: 271 DGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQ 315
+ +L + F+ + E + ++ + R ER +++K Q
Sbjct: 431 REGRVNLPELYTFLHHLAIVEKEVVRRDLQRKSRMRERTEQQKQQ 475
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/276 (36%), Positives = 140/276 (50%), Gaps = 53/276 (19%)
Query: 404 FKAKLKELLRDKSDAFNSDNPEEDKVKLG-----EPGWKERYYEEKFNAKTPEER---EE 455
FKAKL + L + D D +D+V G W+++YY +KF+ +R E+
Sbjct: 643 FKAKLSQKLNREIDG---DTLLKDEVDGGVGCPDRATWRQKYYRQKFHLPAESDRKDVEQ 699
Query: 456 TRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKD-------LD------- 501
DV L Y GL WV+ YYY+G S+ WF+P+HYAP A DL D LD
Sbjct: 700 LASDVALAYIVGLQWVLLYYYQGCNSFDWFFPFHYAPLAVDLADELQRRLKLDDQKEERE 759
Query: 502 ---------------------------QFNISFELGHPFKPFNQLLGVFPSASSHALPEH 534
F ISF LG PF+ F QL+ V P S+ LP
Sbjct: 760 RRGSALGSVQGLPRCGHSRGVSLGQDGNFEISFTLGTPFRAFEQLMAVLPPYSASCLPRE 819
Query: 535 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 594
+ +M +P S I+DFYP+D ++D NGKR+ WQ + LPFIDE RLL K +E LT EE
Sbjct: 820 HAAVMMNPRSAIADFYPSDVKMDPNGKRHQWQWVVLLPFIDENRLLRTCKPLEKFLTLEE 879
Query: 595 ARRNSIMADMLFVLLSHPLSASIYTLD-EHCKQLKI 629
RN +D L+V SHPL+ ++ + EH + + +
Sbjct: 880 RERNRRGSDRLYVHRSHPLARTLAEVSPEHGQGVTV 915
>gi|237842105|ref|XP_002370350.1| exoribonuclease, putative [Toxoplasma gondii ME49]
gi|211968014|gb|EEB03210.1| exoribonuclease, putative [Toxoplasma gondii ME49]
Length = 1239
Score = 246 bits (627), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 143/345 (41%), Positives = 192/345 (55%), Gaps = 32/345 (9%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRF+A+KD + LR +FE EGR++PPK +DSNVITPGT FM L
Sbjct: 133 MNQQRSRRFKAAKDIQEEEKAYAELRAQFESEGREVPPKK--MRWDSNVITPGTPFMHRL 190
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ AL YYI RL + W+ ++VI SDA VPGEGEHKIM ++R QR + PN RH L+
Sbjct: 191 ADALTYYIQDRLATNENWKGLRVIFSDATVPGEGEHKIMDFIRQQRKSGEFCPNLRHVLH 250
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKA----- 175
G DADLIML LATHE +FSILRE V + C CG GH A NC + +A
Sbjct: 251 GADADLIMLGLATHEANFSILREAVVDRTPEQVCSACGAVGHSAENCPASSSVQAPDDRA 310
Query: 176 ---GEFDEKGDEVVVPK--------------------KPYQFLHIWTLREYLDYEFRIPN 212
E D++G + + KP Q L + LREYL YEF
Sbjct: 311 FRVFEQDKRGLKRHLEARGVELREDWATGLESHRRAWKPLQMLQLPVLREYLAYEFITSQ 370
Query: 213 PPFE-IDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVY-KKEFRALGGYLT 270
+ DLE +DDF+F+CF GNDFLPH+P I+ G+I+ L+ +Y + + L YLT
Sbjct: 371 EEGQSFDLERCIDDFVFLCFLCGNDFLPHLPHQSIQRGSIDALVQLYLQLRPQVLTDYLT 430
Query: 271 DGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQ 315
+ +L + F+ + E + ++ + R ER +++K Q
Sbjct: 431 REGRVNLPELYTFLHHLAIVEKEVVRRDLQRKSRMRERTEQQKQQ 475
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/276 (36%), Positives = 140/276 (50%), Gaps = 53/276 (19%)
Query: 404 FKAKLKELLRDKSDAFNSDNPEEDKVKLG-----EPGWKERYYEEKFNAKTPEER---EE 455
FKAKL + L + D D +D+V G W+++YY +KF+ +R E+
Sbjct: 643 FKAKLSQKLNREIDG---DTLLKDEVDGGVGCPDRATWRQKYYRQKFHLPAESDRKDVEQ 699
Query: 456 TRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKD-------LD------- 501
DV L Y GL WV+ YYY+G S+ WF+P+HYAP A DL D LD
Sbjct: 700 LASDVALAYIVGLQWVLLYYYQGCNSFDWFFPFHYAPLAVDLADELQRRLKLDDQKEERE 759
Query: 502 ---------------------------QFNISFELGHPFKPFNQLLGVFPSASSHALPEH 534
F ISF LG PF+ F QL+ V P S+ LP
Sbjct: 760 RRGSALGSVQGLPRCGHSRGVSLGQDGNFEISFTLGTPFRAFEQLMAVLPPYSASCLPRE 819
Query: 535 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 594
+ +M +P S I+DFYP+D ++D NGKR+ WQ + LPFIDE RLL K +E LT EE
Sbjct: 820 HAAVMMNPRSAIADFYPSDVKMDPNGKRHQWQWVVLLPFIDENRLLRTCKPLEKFLTLEE 879
Query: 595 ARRNSIMADMLFVLLSHPLSASIYTLD-EHCKQLKI 629
RN +D L+V SHPL+ ++ + EH + + +
Sbjct: 880 RERNRRGSDRLYVHRSHPLARTLAEVSPEHGQGVTV 915
>gi|327408309|emb|CCA30120.1| GF20490, related [Neospora caninum Liverpool]
Length = 1253
Score = 245 bits (625), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 146/355 (41%), Positives = 192/355 (54%), Gaps = 40/355 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRF+A+KD + E L+ +FE EGR++PPK +DSNVITPGT FM L
Sbjct: 140 MNQQRSRRFKAAKDIQEEEKAYEELKAQFESEGREVPPKKIR--WDSNVITPGTPFMHRL 197
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+IA+ YYI RL W+ +KVI SDA VPGEGEHKIM ++R QR + PN RH L+
Sbjct: 198 AIAITYYIQDRLATRSSWQGLKVIFSDATVPGEGEHKIMDFIRQQRKSGEFRPNLRHVLH 257
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANC------------- 167
G DADLIML LATHE +FSILRE V + C C GH A NC
Sbjct: 258 GADADLIMLGLATHEANFSILREAVVDRTPEQVCSTCNAVGHSAENCKGGFAAGAPAATP 317
Query: 168 ---------EGKAKRKAGEFDEKGDEVVV-----------PKKPYQFLHIWTLREYLDYE 207
E + +E+G E+ KP Q L + LREYL YE
Sbjct: 318 EEERAFQVLEQDKRGLKRHLEERGVELREDWAAGLESHRRAWKPLQMLQLPVLREYLTYE 377
Query: 208 FRIPNPP-FEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVY-KKEFRAL 265
F DLE +DDF+F+CF GNDFLPH+P I+ G+I+ L+ +Y + L
Sbjct: 378 FITQQAEGHSYDLERCIDDFVFLCFLCGNDFLPHLPHQSIQRGSIDALVHLYLHLRPQVL 437
Query: 266 GGYLTDGSKPSLRRVEHFIQAVGSYEDRIF---QKRARLHQRHAERIKREKAQAR 317
YLT + +LR++ F+ + E + Q +A L +A R+ + + +AR
Sbjct: 438 TDYLTHEGRVNLRQLYTFLHHLAIVEKEVKDAEQGKAELSNENAARLLKHQLEAR 492
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/299 (35%), Positives = 145/299 (48%), Gaps = 59/299 (19%)
Query: 370 PHKVPRLSSGATIGAA---IVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEE 426
PHK R S+G GA+ I+ +E+ + FKAKL + L + D D +
Sbjct: 598 PHKRRRGSAGDLSGASPGGILSVPAGKRR--EEDFDMFKAKLSQKLNREIDG---DTLLK 652
Query: 427 DKVKLG-----EPGWKERYYEEKFNAKTPEER---EETRKDVVLRYTEGLCWVMHYYYEG 478
D+V G W+++YY +KF+ +R E DV L Y GL WV+ YYY+G
Sbjct: 653 DEVDGGVGCPDRSTWRQKYYRQKFHLPEESDRRDVETLASDVALAYIVGLQWVLLYYYQG 712
Query: 479 VCSWQWFYPYHYAPFASDLKD--------------------------------------- 499
S+ WF+P+HYAP A DL D
Sbjct: 713 CNSFDWFFPFHYAPLAVDLADELQRRLKLDASKEETQRRDSSIGNARAAHSLKCTTSRGV 772
Query: 500 -LDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDM 558
++ ISF LG PF+ F QL+ V P S+ LP + +MT+P S I+DFYP D ++D
Sbjct: 773 SIEGKQISFTLGMPFRAFEQLMAVLPPYSASCLPREHAAVMTNPRSAIADFYPADVKMDP 832
Query: 559 NGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASI 617
N + WQ + LPFIDE RLL K +E LT EE RN +D LFV SHPL+ ++
Sbjct: 833 N---HQWQWVVLLPFIDENRLLRVCKPLEQFLTLEERERNRRGSDRLFVHRSHPLAETL 888
>gi|224587081|gb|ACN58600.1| 5-3 exoribonuclease 2 [Salmo salar]
Length = 575
Score = 245 bits (625), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 146/352 (41%), Positives = 203/352 (57%), Gaps = 28/352 (7%)
Query: 412 LRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWV 471
++ K++ +S+ ED V+L E GWK+RYY+ KF+ ++ + RK VV+ Y EGLCWV
Sbjct: 108 VKRKAEDSDSEPDPEDNVRLWEDGWKQRYYKTKFDVDATDD--DFRKKVVMSYVEGLCWV 165
Query: 472 MHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHA 530
+ YYY+G SW+W++P+HYAPFASD KD+ FELG PFKP QL+GVFP+AS +
Sbjct: 166 LRYYYQGCASWKWYFPFHYAPFASDFKDIKGMFTDFELGTKPFKPLEQLMGVFPAASGNF 225
Query: 531 LPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTL 590
LPE +R LM++P S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL + ++ L
Sbjct: 226 LPETWRSLMSNPESSIIDFYPDDFAIDLNGKKYAWQGVALLPFVDERRLRAALAEVYPNL 285
Query: 591 TEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGY 650
+ EE +RNS+ +DMLFV SH ++ + ++L E E E + EL G+ G
Sbjct: 286 SPEENKRNSLGSDMLFVGKSH-------SICDFIQELYRGESHEGTE-MPAELCHGIQGT 337
Query: 651 ISPCAGDPHPP--VFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQL 708
++ GDP P SP+ + DI N + YK P G F K V L
Sbjct: 338 LN-LDGDPILPDKPVESPIPMLRDIAQNSAIGVKYK---------DPQFGETFVFKAVIL 387
Query: 709 EDLK-PAPVLWHEDSGRRPHENGRHNPH-GTISGRQ---LGEAAHRLVANSL 755
K PA VL D R G P G S RQ L ++A R + +S+
Sbjct: 388 HGAKIPAKVLKPGDWERGNRGRGNWRPQLGFNSNRQQVHLDQSAFRALGHSV 439
>gi|403414808|emb|CCM01508.1| predicted protein [Fibroporia radiculosa]
Length = 1961
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 134/301 (44%), Positives = 177/301 (58%), Gaps = 41/301 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR +K+A + +R++ E +G KLP D++ FDSN ITPGTEFMA L
Sbjct: 108 MNQQRSRRFRTAKEARE-------VREKAESKGEKLP---DTKAFDSNCITPGTEFMAKL 157
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S LQY+++ +++ D W + V+LS +VPGEGEHKIM Y+RL R P YDPN RHCLY
Sbjct: 158 SAQLQYFVNKKISEDANWSDVTVVLSGHDVPGEGEHKIMEYIRLSRAQPDYDPNVRHCLY 217
Query: 121 GLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADLIML L +H+ HF +LRE V F P + K G +A+ E
Sbjct: 218 GLDADLIMLGLLSHDPHFCLLREEVKFGPASRSK-------GSKSASLESIN-------- 262
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEF---RIPNPPFEIDLECIVDDFIFMCFFVGND 236
+ LH+ +REYLD EF P PF LE I+DDFI + FVGND
Sbjct: 263 ------------FYLLHLTLMREYLDLEFFHDIEPVLPFSYSLEHIIDDFILLAVFVGND 310
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP++P L I E + L VYKK +L GYL + + +R++ + + +E IF+
Sbjct: 311 FLPNLPDLHIHENGLEKLFDVYKKSLPSLDGYLNESGVINTKRLQVILDEMAEWEREIFE 370
Query: 297 K 297
K
Sbjct: 371 K 371
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/206 (46%), Positives = 124/206 (60%), Gaps = 20/206 (9%)
Query: 405 KAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRY 464
KAK+ E DK F++ K K+ E WK YY+ +A D+ ++
Sbjct: 528 KAKVAE--DDKEGDFDARYEMSIKDKMDE--WKRNYYKACPSAS----------DIWMQ- 572
Query: 465 TEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFP 524
WVMHYYY GV SW WFY YHYAP SDLK +DQ + F+LG PF+PF QL+GV P
Sbjct: 573 -----WVMHYYYSGVASWSWFYNYHYAPRISDLKGVDQMSFQFDLGTPFRPFEQLMGVLP 627
Query: 525 SASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVK 584
AS +P YR+LM D NSPI DFYP +FE+D+NGK+ W+ I K+PFID+ RLL ++
Sbjct: 628 EASKELIPPAYRELMFDVNSPILDFYPQEFELDLNGKKQDWEAIVKIPFIDQDRLLSAMR 687
Query: 585 KIEHTLTEEEARRNSIMADMLFVLLS 610
EH LT++E RN+ + M F S
Sbjct: 688 SREHRLTKDERHRNAFGSSMKFFFHS 713
>gi|297611272|ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa Japonica Group]
Length = 1601
Score = 242 bits (618), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 125/250 (50%), Positives = 161/250 (64%), Gaps = 12/250 (4%)
Query: 59 VLSIALQYYIHLRLNNDPG-WEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRH 117
+++ AL + N +P + + VILSDANVPGEGEHKIMS++R QR GYDPNTRH
Sbjct: 799 IVAYALSVAEEIEGNAEPSTYSEAIVILSDANVPGEGEHKIMSFIRAQRGREGYDPNTRH 858
Query: 118 CLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAG- 176
CLYGLDADLIMLALA+HEVHFSILRE V Q+ P + K K +A
Sbjct: 859 CLYGLDADLIMLALASHEVHFSILREEVLHQNNQENTIPI-TPKTFTSQEAEKFKCRAWF 917
Query: 177 -EFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGN 235
E E + KKPYQFL+IW LREYL+ + +IPNP +D+E ++DDF+F+CF GN
Sbjct: 918 PRITEARPEGKLTKKPYQFLNIWVLREYLELDMKIPNPIQTLDVERMIDDFVFICFLTGN 977
Query: 236 DFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKP--------SLRRVEHFIQAV 287
DF+PH+P+LEI EGAI+LL+ VYK F +GGY+ D K + R+E F +
Sbjct: 978 DFIPHIPSLEIHEGAIDLLIEVYKTSFNKMGGYIVDTDKVKDKHAAYLKVSRLEKFFHEL 1037
Query: 288 GSYEDRIFQK 297
YE++IF K
Sbjct: 1038 SLYEEKIFLK 1047
Score = 122 bits (307), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 150/342 (43%), Gaps = 76/342 (22%)
Query: 382 IGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYY 441
+ ++ + + S E D N E + LK++L +K D + + DK+KLG PGWK R++
Sbjct: 1158 VKSSQTDGQVSDEQDITMNTLELRKNLKDILHNKQDLIKTGACKHDKIKLGSPGWKSRFF 1217
Query: 442 EEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLD 501
+EKF+A+T +E + + ++V
Sbjct: 1218 KEKFDAETKDEIAKLQNEMV---------------------------------------- 1237
Query: 502 QFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGK 561
IS L + N +L S ALP Y KLM S I FYP++ ++D +GK
Sbjct: 1238 --TISCFLNYA----NGIL-------SFALPGCYSKLMDCDESAIQAFYPSELDIDTDGK 1284
Query: 562 RYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLS---ASIY 618
RY WQGIAKLPFI++ LL K E L E RRN++ + +F+ S+ L+ A
Sbjct: 1285 RYLWQGIAKLPFIEDKLLLSVTKTAEKDLAVHELRRNTVRQEKIFLRNSNALAKNEAFAQ 1344
Query: 619 TLDEHCKQLKIK-ERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSPVASMEDIMGNQ 677
T D ++L I E+ L+P+ D NG+ G P I +
Sbjct: 1345 TSDCSLQKLPIDPATSEIGGWLSPDDDDFSNGF----CGSP--------------IENDL 1386
Query: 678 VLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKPAPVLWH 719
+ A + P+A K TR V P K V D+ P LWH
Sbjct: 1387 SISAKFFNPEAVKPATRLLQNVTVPYKTVTEADICARP-LWH 1427
>gi|222622867|gb|EEE56999.1| hypothetical protein OsJ_06746 [Oryza sativa Japonica Group]
Length = 391
Score = 242 bits (618), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 131/276 (47%), Positives = 167/276 (60%), Gaps = 63/276 (22%)
Query: 5 RSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIAL 64
RSR+ + A+EEE ++ K V D NVITPGTEFM +S AL
Sbjct: 117 RSRKRHPCFGSILQASEEEEMQ------------KISEGVSDPNVITPGTEFMEKISQAL 164
Query: 65 QYYIHLRLNN-DPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLD 123
YYI RLN+ DPGW+ I VILSDANVPGEGEHKIMS++R QR++ GYDPNTRHCL+G D
Sbjct: 165 TYYIRARLNSSDPGWKHIMVILSDANVPGEGEHKIMSFIRAQRSMEGYDPNTRHCLFGHD 224
Query: 124 ADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGD 183
ADLIMLALA+HEVHFSILRE
Sbjct: 225 ADLIMLALASHEVHFSILRE---------------------------------------- 244
Query: 184 EVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPT 243
FL+IW LREYL+ E +I +P E D+E ++DDFIF+CF +GNDF+PH+P+
Sbjct: 245 ----------FLNIWVLREYLEIELKILDPVCEPDIERLIDDFIFICFLMGNDFIPHIPS 294
Query: 244 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRR 279
LE++E A++LL+ VYK F +GGY+ + K SL++
Sbjct: 295 LEMKEYALDLLIEVYKTTFNKMGGYIVNIEKESLKK 330
>gi|440293117|gb|ELP86279.1| 5'->3' exoribonuclease, putative [Entamoeba invadens IP1]
Length = 881
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 149/321 (46%), Positives = 192/321 (59%), Gaps = 20/321 (6%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRF+A++DA +E+ ++G P + DSN ITPGT FM +
Sbjct: 105 MNQQRARRFKAARDAQSKEEYDEQKNITLIQQGHS--PIAIKPTLDSNCITPGTVFMERV 162
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+ Y+ R++ W+K+ VI+SDA+VPGEGEHKIM Y+R Q++ P Y+PN HC+Y
Sbjct: 163 TETLKEYVKERISTSAYWKKLVVIISDASVPGEGEHKIMEYIRKQKDQPNYNPNIHHCIY 222
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML LATHE FSI+RE VF + C++CGQ GH C K + G D
Sbjct: 223 GLDADLIMLTLATHERKFSIIREQVFF--EHVPCYICGQQGHAPDRCSHKG--EIGAMDP 278
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
+KP+ FLH LREYL RI D E I+DDFIF CFFVGNDFLPH
Sbjct: 279 -------IRKPFLFLHCHILREYLSKTIRIEG----FDFERIIDDFIFFCFFVGNDFLPH 327
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
P+LEIREG+I++LM VY K F GYLTD + ++F+ VG E RI Q ++
Sbjct: 328 SPSLEIREGSIDMLMEVYMK-FLPENGYLTDSGTLNATHAKNFMSLVGQREQRILQSKSE 386
Query: 301 LHQRHAERIKREKAQARRGDD 321
R RI R+ R DD
Sbjct: 387 KESRF--RINRKGKMIREFDD 405
Score = 136 bits (343), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 95/176 (53%), Gaps = 5/176 (2%)
Query: 425 EEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQW 484
E + + G++ +YY K + P E +V Y GL WV+ YYY+G W W
Sbjct: 442 ESEDINYSMNGYQAKYYASKLKIEYPSE---AMTQLVNEYFIGLSWVLKYYYQGCQCWDW 498
Query: 485 FYPYHYAPFASDLKDL--DQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDP 542
++PY YAPF +D+ + FELG PFKP QL+ V P S +P +R +M
Sbjct: 499 YFPYLYAPFIADVATYLDNTLEPKFELGIPFKPVEQLMSVLPPRSKECVPMLFRDIMNST 558
Query: 543 NSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
SPI +FYP F +DMNGK + + L FID+ +LL+ +K +E L +E +RN
Sbjct: 559 TSPIKEFYPEKFAIDMNGKTQEYLAVILLSFIDQNKLLEVLKPLEKQLQGQEFKRN 614
>gi|146104232|ref|XP_001469769.1| putative exoribonuclease 2 [Leishmania infantum JPCM5]
gi|134074139|emb|CAM72881.1| putative exoribonuclease 2 [Leishmania infantum JPCM5]
Length = 879
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 185/607 (30%), Positives = 267/607 (43%), Gaps = 140/607 (23%)
Query: 1 MNQQRSRRFRASKDA----ADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEF 56
MNQQRSRRFRA+ + A S A +R+ E+ LP + +D NVITP T F
Sbjct: 109 MNQQRSRRFRAADERLESDAISNACADRIVSEYH-----LPRPRVRERWDHNVITPSTAF 163
Query: 57 MAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTR 116
M +++AL++YI +LN D W + V+ SDA+VPGEGEHKIM Y+R R+ PGYD NT
Sbjct: 164 MERVALALEWYIMKKLNEDAAWRHLTVVFSDAHVPGEGEHKIMQYIRGLRSQPGYDYNTS 223
Query: 117 HCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAG 176
H ++G+DADLI L L+THE H ILR Q + F QP H
Sbjct: 224 HVIHGMDADLICLGLSTHEKHVCILR------NQLTETF---QPDH-------------- 260
Query: 177 EFDEKGDEVVVPKKPYQFLHIWTLREYLDYEF-RIPNPPFEIDLECIVDDFIFMCFFVGN 235
+ + ++ T RE L +F I FE +VDDFIF+CFFVGN
Sbjct: 261 -------------NRFCYFNLSTYREKLMQDFSNIEGMQFER----VVDDFIFLCFFVGN 303
Query: 236 DFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDR-- 293
DFLPH+P + I+ I +L+ Y ++F AL GYLT + + F+ S
Sbjct: 304 DFLPHVPLVSIKTRGIEMLLDHYVRDF-ALHGYLTQLGEVDYAHLHIFLMNFTSKCMMKL 362
Query: 294 ------IFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPS 347
+ + + R Q ER+ + +AQ VS G+ L P
Sbjct: 363 TKEYYGVVRAKERAKQHVEERVTKTEAQ------------------VSEVLGTLL---PD 401
Query: 348 PSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEA-------ENSFETDPQEN 400
S Q+ V +S R + + +G + ++ ++ F DP N
Sbjct: 402 RSNAQE---VSDALLALMSSARKERTRLVVDKQPLGFSYLDKAYRDAYYQHKFGWDPSAN 458
Query: 401 KEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDV 460
+ F++ ++ + W RY
Sbjct: 459 RAAFESHIRLCCAEYLRGLQ---------------WVMRY-------------------- 483
Query: 461 VLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLD-QFNISFELGHPFKPFNQL 519
YT+G C +Y+ PYHYAP DL N+ + P P QL
Sbjct: 484 ---YTKG-CPSWEWYF----------PYHYAPLLQDLAAFTATVNVEMRMSAPLHPVEQL 529
Query: 520 LGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARL 579
L V P S HALPE + + DP S + FYP +VD + +S+QG+ ++PFI+ L
Sbjct: 530 LAVLPRLSVHALPEELHEAVNDPKSVLGKFYPAIVDVDFSEANFSYQGVLRIPFINCEAL 589
Query: 580 LDEVKKI 586
+++
Sbjct: 590 SKACRQL 596
>gi|398024282|ref|XP_003865302.1| exoribonuclease 2, putative [Leishmania donovani]
gi|322503539|emb|CBZ38625.1| exoribonuclease 2, putative [Leishmania donovani]
Length = 879
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 185/607 (30%), Positives = 267/607 (43%), Gaps = 140/607 (23%)
Query: 1 MNQQRSRRFRASKDA----ADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEF 56
MNQQRSRRFRA+ + A S A +R+ E+ LP + +D NVITP T F
Sbjct: 109 MNQQRSRRFRAADERLESDAISNACADRIVSEYH-----LPRPRVRERWDHNVITPSTAF 163
Query: 57 MAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTR 116
M +++AL++YI +LN D W + V+ SDA+VPGEGEHKIM Y+R R+ PGYD NT
Sbjct: 164 MERVALALEWYIMKKLNEDAAWRHLTVVFSDAHVPGEGEHKIMQYIRGLRSQPGYDYNTS 223
Query: 117 HCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAG 176
H ++G+DADLI L L+THE H ILR Q + F QP H
Sbjct: 224 HVIHGMDADLICLGLSTHEKHVCILR------NQLTETF---QPDH-------------- 260
Query: 177 EFDEKGDEVVVPKKPYQFLHIWTLREYLDYEF-RIPNPPFEIDLECIVDDFIFMCFFVGN 235
+ + ++ T RE L +F I FE +VDDFIF+CFFVGN
Sbjct: 261 -------------NRFCYFNLSTYREKLMQDFSNIEGMQFER----VVDDFIFLCFFVGN 303
Query: 236 DFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDR-- 293
DFLPH+P + I+ I +L+ Y ++F AL GYLT + + F+ S
Sbjct: 304 DFLPHVPLVSIKTRGIEMLLDHYVRDF-ALHGYLTQLGEVDYAHLHIFLMNFTSKCMMKL 362
Query: 294 ------IFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPS 347
+ + + R Q ER+ + +AQ VS G+ L P
Sbjct: 363 TKEYYGVVRAKERAKQHVEERVTKTEAQ------------------VSEVLGTLL---PD 401
Query: 348 PSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEA-------ENSFETDPQEN 400
S Q+ V +S R + + +G + ++ ++ F DP N
Sbjct: 402 RSNAQE---VSDALLALMSSARKERTRLVVDKQPLGFSYLDKAYRDAYYQHKFGWDPSAN 458
Query: 401 KEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDV 460
+ F++ ++ + W RY
Sbjct: 459 RAAFESHIRLCCAEYLRGLQ---------------WVMRY-------------------- 483
Query: 461 VLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLD-QFNISFELGHPFKPFNQL 519
YT+G C +Y+ PYHYAP DL N+ + P P QL
Sbjct: 484 ---YTKG-CPSWEWYF----------PYHYAPLLQDLAAFTATVNVEMRMSAPLHPVEQL 529
Query: 520 LGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARL 579
L V P S HALPE + + DP S + FYP +VD + +S+QG+ ++PFI+ L
Sbjct: 530 LAVLPRLSVHALPEELHEAVNDPKSVLGKFYPAIVDVDFSEANFSYQGVLRIPFINCEAL 589
Query: 580 LDEVKKI 586
+++
Sbjct: 590 SKACRQL 596
>gi|7019942|dbj|BAA90934.1| unnamed protein product [Homo sapiens]
Length = 560
Score = 238 bits (608), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 133/302 (44%), Positives = 180/302 (59%), Gaps = 21/302 (6%)
Query: 412 LRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWV 471
++ K++ +S+ ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV
Sbjct: 102 IKRKAEDSDSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWV 159
Query: 472 MHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHA 530
+ YYY+G SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS +
Sbjct: 160 LRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNF 219
Query: 531 LPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTL 590
LP +RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ L
Sbjct: 220 LPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDL 279
Query: 591 TEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGY 650
T EE RRNS+ D+LFV HPL I L Q E VEV PEL G+ G
Sbjct: 280 TPEETRRNSLGGDVLFVGKHHPLHDFILEL----YQTGSTEPVEVP----PELCHGIQGK 331
Query: 651 ISPCAGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHV--------TRPPAGVI 700
S P + SPV + D+ N V+ +K P A ++ R PA V+
Sbjct: 332 FSLDEEAILPDQIVCSPVPMLRDLTQNTVVSINFKDPQFAEDYIFKAVMLPGARKPAAVL 391
Query: 701 FP 702
P
Sbjct: 392 KP 393
>gi|440792890|gb|ELR14098.1| zinc knuckle domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 862
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 137/319 (42%), Positives = 190/319 (59%), Gaps = 15/319 (4%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRF A+K + EE + + E +G K P K +FD NVITPGTEFMA
Sbjct: 108 MNQQRSRRFLAAKHRLE---EEAKAKAE-PADGGKQPAKP---IFDHNVITPGTEFMARA 160
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ AL+ + +++ DP W + VILSD+ VPGEGEHKIM ++R QR GY+PN +Y
Sbjct: 161 AEALRAHFARKISADPNWSPLAVILSDSCVPGEGEHKIMEFIRHQRIQEGYNPNAHMAVY 220
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANC-EGKAKRKAGEFD 179
GLDADLI L LA HE FSILRE V CF+C + GH++ +C + + + D
Sbjct: 221 GLDADLIFLTLAQHEPRFSILREEV----SSVTCFVCHKVGHISTDCPQLHPEEHKHDDD 276
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
++ ++ P+ +Q++H LREYLD EFR + F LE ++DDFI +CF GNDFLP
Sbjct: 277 DEENDEQPPELRFQWVHTQVLREYLDREFRHLSLSFPYSLERVIDDFIVICFLAGNDFLP 336
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
+P++ I EGAI+ L+ YK L GY+ RR+EH + V + E+ + ++R
Sbjct: 337 RLPSVAIHEGAIDTLIGAYKHHLPQLDGYICTNGNIDFRRLEHVVAMVAASEEAVLKERK 396
Query: 300 ---RLHQRHAERIKREKAQ 315
R Q + + RE AQ
Sbjct: 397 KNFRRRQLQEKALLRELAQ 415
Score = 185 bits (470), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 90/192 (46%), Positives = 120/192 (62%), Gaps = 9/192 (4%)
Query: 429 VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPY 488
V++GE GW++RY +KF P E + VV Y EGL WV YY++G SW+WFYPY
Sbjct: 478 VRIGERGWRDRYVMQKFG--VPSANREFYQGVVRAYVEGLQWVARYYWQGCVSWKWFYPY 535
Query: 489 HYAPFASDLKDLDQFN-----ISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPN 543
HY P A+ L+D+ +F SF+L PF PF QL+ V P+AS+HALP + LMT
Sbjct: 536 HYPPMATMLEDIGRFRSAEVVASFQLAEPFHPFAQLMAVLPAASAHALPPPCQALMTSAQ 595
Query: 544 SPISDFYPTDFEVDMNGKRYS--WQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIM 601
SPI+D+YPT E+DM+G ++ W G+ KLPF+DE RLL +K +E LT EE RNS
Sbjct: 596 SPIADYYPTKIEIDMDGVSHNLEWAGVVKLPFVDENRLLAVIKPLESQLTAEEVHRNSFG 655
Query: 602 ADMLFVLLSHPL 613
L + + PL
Sbjct: 656 LPRLLIGPASPL 667
>gi|452820477|gb|EME27519.1| 5'-3' exoribonuclease [Galdieria sulphuraria]
Length = 1343
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 140/324 (43%), Positives = 183/324 (56%), Gaps = 42/324 (12%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR +KD A E R++Q G+ +P + FDSN ITPGT FMA
Sbjct: 97 MNQQRARRFRTAKDRAQEM--ENRIKQ-----GKPVPQR----FFDSNCITPGTHFMASF 145
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S AL+Y +H ++ D W ++VILS NVPGEGEHKI+ Y+R ++ ++ N HCLY
Sbjct: 146 SEALEYLVHKKITEDKSWATVEVILSTTNVPGEGEHKIIEYIRRKKLSGEWEANLSHCLY 205
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQD--KCFLCGQPGHLAANCEGKAKRKAGEF 178
GLDADLIML+L THE HF +LRE Q D K F+ + G+LA + +GEF
Sbjct: 206 GLDADLIMLSLVTHEPHFILLRE------QTDLSKLFV-SKKGNLAVEATPLDRCISGEF 258
Query: 179 DEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFL 238
+F I LREYLD EF P +LE + DFIFMCF VGNDFL
Sbjct: 259 --------------EFFSIGVLREYLDSEF-CTLPITFYNLENCIHDFIFMCFLVGNDFL 303
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 298
P +PTL I EGA++ ++ +YKK GGYL + L R+E F+ +G E I +R
Sbjct: 304 PQLPTLNIAEGALDTMLTLYKKLLPLFGGYLIENGNIVLERLEIFLSKLGLLERLIVNRR 363
Query: 299 ARLHQRHAERIKREKAQARRGDDV 322
E I + K +A R D+
Sbjct: 364 -------LEAIAQSKGRAPRMVDI 380
Score = 159 bits (403), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 82/173 (47%), Positives = 107/173 (61%), Gaps = 5/173 (2%)
Query: 437 KERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASD 496
K+ YY +K N E +++ + + Y +GL W YYY G SW+WFYPYHYAP ASD
Sbjct: 431 KKSYYRDKLNMDL--EDKDSLEKLKFTYLKGLLWTWKYYYSGCPSWRWFYPYHYAPMASD 488
Query: 497 LKDLDQF-NIS-FELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDF 554
L L NI F PF PF QLL V P S+ LP +KLM D +SPI FYP+DF
Sbjct: 489 LVGLTGVTNICDFSASEPFLPFQQLLAVLPPQSAWCLPTALQKLMNDKSSPIFRFYPSDF 548
Query: 555 EVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTL-TEEEARRNSIMADMLF 606
EVDM+GKR +W+G+ KLPF+DE+ LL+ I + L +EEE RN+ M++
Sbjct: 549 EVDMDGKRNAWEGVIKLPFVDESLLLEAYHSIPNELFSEEERNRNACRQTMIY 601
>gi|324502945|gb|ADY41287.1| 5'-3' exoribonuclease 2 [Ascaris suum]
Length = 578
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 181/540 (33%), Positives = 252/540 (46%), Gaps = 82/540 (15%)
Query: 268 YLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARRGDDVEPLAQ 327
YLT+ + RV+ + +G ED IF+ R Q+ + +R KA+ RR E A
Sbjct: 19 YLTNQGDVYMDRVQKILNGLGEVEDEIFKSR---QQKELQFRERNKAKRRR----ERAAT 71
Query: 328 PDSLVPVSRFHGSRLA-SGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAI 386
+ +PV GS LA P + ++ RL ++ SS A
Sbjct: 72 TPAYIPV---RGSLLAPQANGPVSFSGAD-TRRLARDARVQAMEYQ--NASSKANTVVTT 125
Query: 387 VEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEE--DKVKLGEPGWKERYYEEK 444
V+A + P++ K E +SD+ EE D+V+L E GWKERYY K
Sbjct: 126 VQA-----SGPRKRKME----------------DSDSEEEVYDEVRLWETGWKERYYRSK 164
Query: 445 FNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFN 504
F + R V Y EGLCWV+ YYY+G SW W++PYHYAPFASD + QF
Sbjct: 165 FEVDGND--IAFRHKVAWAYVEGLCWVLKYYYQGCVSWNWYFPYHYAPFASDFDTISQFK 222
Query: 505 ISFEL-GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRY 563
F PFKP QL+ VFP+AS LPE ++ LMT SPI DFYP DF+VD+NGK+Y
Sbjct: 223 PDFSAHTEPFKPLEQLMAVFPAASKKHLPESWQDLMTSEESPIIDFYPEDFQVDLNGKKY 282
Query: 564 SWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEH 623
+WQG+A LPF+DE RLL+ + + L + E RNS D +FV HP S + L E
Sbjct: 283 AWQGVALLPFVDEHRLLETLATVYDKLDDFERERNSRGPDRIFVGRKHPFSKFLQQLYEG 342
Query: 624 CKQLKIKERVEVKERLNPELSDGMNGYISP------CAGDPHPPVFRSPVASMEDIMGNQ 677
E ++P ++G+ G + H P+ P+ DI N
Sbjct: 343 S----CPENEGTLIAIDPSFTNGLAGSVGVDSKVVRIGERYHSPI---PLDCCPDIPSNS 395
Query: 678 VLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKPAPVLWHEDSGRRPHEN-GRHNPHG 736
+ AIY+ P K P + K++ + LKP+ W+ + RP R P G
Sbjct: 396 AIMAIYQDPQFEKSFIFPAKRLAGAKEVPRT--LKPSD--WNSNEAYRPQIGFTRDVPRG 451
Query: 737 TISGRQLGEAAHRLVANSLQHMKVDRNGYGD------------RMHGSPLPYAAAPYVPP 784
+L +A HR++A H R G G R + P+PY P +PP
Sbjct: 452 -----RLSDAGHRMIA----HEMASRYGPGGFQTSESRWQVERRRYDFPVPY---PLLPP 499
>gi|340506425|gb|EGR32559.1| hypothetical protein IMG5_077960 [Ichthyophthirius multifiliis]
Length = 1187
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 166/599 (27%), Positives = 287/599 (47%), Gaps = 113/599 (18%)
Query: 2 NQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLS 61
NQQR+RRF ++K D L + G +++Q +N I+ GT FM L+
Sbjct: 99 NQQRTRRFLSAKSHKD-------LNNSLKNCG----ILAENQTMQNNAISTGTTFMHELN 147
Query: 62 IALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYG 121
+Q+YI + DP W+ ++V S +NVPGEGEHKI++++ + YDP+T HC+YG
Sbjct: 148 QQIQFYIKNKFKQDPQWKNLEVFFSGSNVPGEGEHKIINFMHQYCSSDNYDPSTTHCIYG 207
Query: 122 LDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEK 181
+DADLIML L+TH + SILRE + H+ N AKR+
Sbjct: 208 VDADLIMLGLSTHIKYVSILRE---------------EMRHI-PNISKAAKRE------- 244
Query: 182 GDEVVVPKKPYQFLHIWTLREYLDYEFR-----IPNPPFEIDLECIVDDFIFMCFFVGND 236
+ +Q +++ +REYLD E++ + N + D+E I+DDF+ +CFF+GND
Sbjct: 245 -----IQINQFQIIYLNIVREYLDLEYKQLQGEMKNLKY--DIENIIDDFLLICFFIGND 297
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
F+P + IREG +L+ +YK + YL + + + + I+ + +YE
Sbjct: 298 FIPRLYCFNIREGQFEILIQIYKNYIKEAKEYLNNMGYINWKGMYELIKQISNYEKEFIG 357
Query: 297 KRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSEC 356
+A + R + + + G+D F+ + + +Q+E
Sbjct: 358 DKADECTKEYNR----QLKGQEGED--------------NFNVDDINKDKESNNNKQNE- 398
Query: 357 VGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKS 416
T + + I + +N F+ +E K F ++ L ++
Sbjct: 399 --------NTFQQEYD----------NIIIDQQKNVFKEINKEKK--FLEDIQILYNTEA 438
Query: 417 DAFNSDNPEEDKVKLGEPGWKERYYEEKFNAK-TPEEREETRKDVVLRYTEGLCWVMHYY 475
D F + + YY+EK + + + +++ +Y EGL +V+ YY
Sbjct: 439 DGFQA---------------RTYYYKEKLQLDFSNSQHFKVLDNLITKYIEGLQFVLLYY 483
Query: 476 YEGVCSWQWFYPYHYAPFASDLKDLDQF-------NISFELGHPFKPFNQLLGVFPSASS 528
Y+GV SW W+YP++YAP ++D+ ++ I F+L P++P QL+ + ++
Sbjct: 484 YKGVPSWSWYYPFYYAPMSADISLYIEYKQSILSQTIKFDLSQPYQPMKQLMCIIHPENA 543
Query: 529 HALPEHYRKLMTD-PNSPIS---DFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEV 583
LP +L+TD NSP+ D+YP ++ +D G ++ + I LPF+ E L+++V
Sbjct: 544 SLLPPKIAQLLTDQTNSPLRNPIDYYPEEYRIDPYGGVFAHEYIVVLPFM-EQELIEKV 601
>gi|156085645|ref|XP_001610232.1| 5'-3' exoribonuclease (XRN2) [Babesia bovis T2Bo]
gi|154797484|gb|EDO06664.1| 5'-3' exoribonuclease (XRN2), putative [Babesia bovis]
Length = 1388
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 181/631 (28%), Positives = 262/631 (41%), Gaps = 163/631 (25%)
Query: 3 QQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQV---FDSNVITPGTEFMAV 59
QQR RRFR+++D+ + + +++ E K P D V FD ITPGT FM
Sbjct: 121 QQRDRRFRSARDSNKNEVVFQTIQENNGIE--KEPSDGDGDVNFKFDPIQITPGTPFMER 178
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRN-------LPGYD 112
LS+ L+++ H+ ++ + W+ +K+++S ++VPGEGEHKIM Y+R ++ G
Sbjct: 179 LSVRLRFFAHMMIHENKAWKNLKIVVSGSDVPGEGEHKIMEYIRNDKSNRHDAARAGGTP 238
Query: 113 PNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAK 172
HC+YGLDADLIML+LATHE + +LRE V+ +Q
Sbjct: 239 QYISHCIYGLDADLIMLSLATHEPYVCLLREQVYFFNKQ--------------------- 277
Query: 173 RKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIP----NPPFEIDLECIVDDFIF 228
+++ Y FLHI LREY+ ++ I P ID +VDDF+
Sbjct: 278 --------TNSRMMMNMNDYIFLHIGILREYILHDMVISPELRRQPRTIDR--VVDDFVL 327
Query: 229 MCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVG 288
M F+GNDFLPH +I +G +N + +Y + YL + + S + G
Sbjct: 328 MSMFMGNDFLPHGKFAKITDGGLNTYITLYSR-------YLEERYRSSPNGHIWLVTGCG 380
Query: 289 SYE-DRIFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPS 347
+ L +R + RI E L GP
Sbjct: 381 EINCTNLLHFLNMLVKRESSRITDE-----------------------------LHCGP- 410
Query: 348 PSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAK 407
D G+G + R K SG T I A TDP E + +++ K
Sbjct: 411 -------------DAGRGEAKRNGK-----SGKTEITVIDVANCCIMTDPSEFRAKYEGK 452
Query: 408 LKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKT------------PEEREE 455
K W+ RYY K + E
Sbjct: 453 PKSFAE----------------------WRSRYYMAKMGIASDVIVHKSTKSSDTESSPC 490
Query: 456 TRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQ------------- 502
T +VV Y EG+ WVM+YYY GV SW W+ YAP SD++ Q
Sbjct: 491 TIPEVVRDYLEGIQWVMYYYYRGVPSWNWYLRCKYAPLLSDVRFFIQRMKQSYDRGGNRP 550
Query: 503 -------------FNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDF 549
+ FE+ P PF QL+ V P A++H LP + LMTD SP+ +
Sbjct: 551 RDCPANATTLSQVMQLKFEISEPVTPFQQLMMVMPPAAAHFLPTVFGNLMTDTESPLRKY 610
Query: 550 YPTDFEVDMNGKRYSWQGIAKLPFIDEARLL 580
YP F++DM+ W G+ LP + LL
Sbjct: 611 YPEHFDIDMDDTNVQWGGVTLLPIVPPNLLL 641
>gi|353234672|emb|CCA66695.1| probable KEM1-5`-3` exonuclease component of cytoplasmic processing
(P) bodies [Piriformospora indica DSM 11827]
Length = 1438
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 131/315 (41%), Positives = 180/315 (57%), Gaps = 58/315 (18%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR +K+ D L ++ R+G KLP D + FDSN ITPGT FMA L
Sbjct: 74 MNQQRSRRFRTAKETKD-------LVEKALRKGEKLP---DEKAFDSNCITPGTPFMARL 123
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S+ LQY+++ ++ D W ++VILS VPGEGEHKIM Y+RL + Y+PNTRHCLY
Sbjct: 124 SLQLQYFVNKKITEDSNWRDVQVILSGHEVPGEGEHKIMEYIRLSKAQKDYNPNTRHCLY 183
Query: 121 GLDADLIMLALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADLIML L +H+ HF++LR EV F P +AK+K+G +
Sbjct: 184 GLDADLIMLGLLSHDPHFALLREEVKFGP---------------------QAKKKSGTLE 222
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFR---------IPNP--------PFEIDLECI 222
+ + LH+ REYL+ EF+ I +P PFE LE I
Sbjct: 223 TQS---------FFLLHLCLFREYLNLEFQPLWDPKAINIADPSASSKPILPFEYSLERI 273
Query: 223 VDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEH 282
+DDFI + FVGNDFLPH+P L I + A+ +L Y++ GGYL + + R++
Sbjct: 274 IDDFILLAVFVGNDFLPHLPDLHIHDNALEVLFEKYRETLPKAGGYLNESGVINTERLQM 333
Query: 283 FIQAVGSYEDRIFQK 297
+ A+ ++E + F+K
Sbjct: 334 VLDALATFEQQAFEK 348
Score = 206 bits (524), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 126/202 (62%), Gaps = 4/202 (1%)
Query: 408 LKELLRDK--SDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYT 465
LK+ R K D D E +K WK +YY+EK K ++ E +V RY
Sbjct: 482 LKKYARAKILEDEGTFDERYETTLKARMDNWKRQYYQEKLEIKYDDK--EAMDKLVYRYI 539
Query: 466 EGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPS 525
EGL WVMHYYY GV SW WFY YHYAP SDLK +D+ F+LG PF+P+ QL+GV P+
Sbjct: 540 EGLQWVMHYYYSGVASWGWFYDYHYAPRISDLKGVDKMKFDFKLGIPFRPYEQLMGVLPA 599
Query: 526 ASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKK 585
AS +P+ YR LM DP SPI DFYPTDFE D+NGK+ W+ I K+PFI+E RLL +
Sbjct: 600 ASQEHIPQAYRDLMYDPTSPILDFYPTDFESDLNGKKQEWEAIVKIPFINEQRLLQAMAS 659
Query: 586 IEHTLTEEEARRNSIMADMLFV 607
EH LT+EE RN++ + F
Sbjct: 660 REHRLTKEEKERNTVGTSLTFT 681
>gi|290978067|ref|XP_002671758.1| predicted protein [Naegleria gruberi]
gi|284085329|gb|EFC39014.1| predicted protein [Naegleria gruberi]
Length = 1261
Score = 235 bits (600), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 144/307 (46%), Positives = 190/307 (61%), Gaps = 41/307 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR D E++LR++ E++G K+P + + +FDSN ITPGTEFMA L
Sbjct: 93 MNQQRSRRFRKVFD-------EQQLRKKLEQKGEKVPERDN--LFDSNCITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S+ L+Y+IH ++ D W++ KVILS VPGEGEHKIM+++R ++ GY PN RHCLY
Sbjct: 144 SMHLKYFIHSKMQTDIKWQQCKVILSGHEVPGEGEHKIMNFIRGRKMEAGYQPNERHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLI L L THE HF +LRE VF + N + K K F E
Sbjct: 204 GLDADLICLGLVTHEPHFMLLREDVFEQYR---------------NNDSKEKSSNKPFAE 248
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIP----NPPFEIDLECIVDDFIFMCFFVGND 236
K + LH+ LR+YLD+EFR FE DLE I+DDF+F FF GND
Sbjct: 249 K----------FHLLHLCALRQYLDFEFRQALLEQKLSFEYDLERIIDDFVFFIFFTGND 298
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLPHMPTL+I+EG+IN ++ +Y K+ GYLT+ L RV+ F++A+ S E + +
Sbjct: 299 FLPHMPTLDIKEGSINTMIDIY-KQILPKSGYLTELGDVHLERVQDFVRALASQESSMME 357
Query: 297 KR--ARL 301
+R ARL
Sbjct: 358 QRYTARL 364
>gi|157817638|ref|NP_001102066.1| 5'-3' exoribonuclease 2 [Rattus norvegicus]
gi|149041187|gb|EDL95120.1| 5'-3' exoribonuclease 2 (predicted), isoform CRA_c [Rattus
norvegicus]
Length = 561
Score = 235 bits (599), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 133/302 (44%), Positives = 179/302 (59%), Gaps = 21/302 (6%)
Query: 412 LRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWV 471
L+ K++ +S+ ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV
Sbjct: 102 LKRKAEDSDSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWV 159
Query: 472 MHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHA 530
+ YYY+G SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS +
Sbjct: 160 LRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSEFEKGTKPFKPLEQLMGVFPAASGNF 219
Query: 531 LPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTL 590
LP +RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ L
Sbjct: 220 LPPTWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDL 279
Query: 591 TEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGY 650
T EE RRNS+ +D+LFV HPL I L Q E V+V PEL G+ G
Sbjct: 280 TPEENRRNSLGSDVLFVGKVHPLHDFILEL----YQTGSTEPVDVP----PELCHGIQGK 331
Query: 651 ISPCAGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHV--------TRPPAGVI 700
S P SPV + D+ N + +K P A +V R PA V+
Sbjct: 332 FSLDEEAILPDQTVCSPVPMLRDLTQNTAISINFKDPQFAEDYVFKAIMLPGARKPAAVL 391
Query: 701 FP 702
P
Sbjct: 392 KP 393
>gi|326436856|gb|EGD82426.1| hypothetical protein PTSG_11962 [Salpingoeca sp. ATCC 50818]
Length = 1282
Score = 235 bits (599), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 114/221 (51%), Positives = 144/221 (65%), Gaps = 8/221 (3%)
Query: 401 KEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDV 460
++ KA +KE LR+ +D + E++V LG G+ ERYY+ KF +DV
Sbjct: 603 RDALKAAVKERLRNMNDKRVEQH--EEQVNLGLHGYHERYYKLKFGDSV------QPRDV 654
Query: 461 VLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLL 520
Y EGLCWVM YYYEG SW WFYPYHYAPFA D D+ +I F+ G PF PF QL+
Sbjct: 655 ARAYVEGLCWVMKYYYEGCPSWNWFYPYHYAPFAQDFVDVAGMSIRFDGGSPFTPFQQLM 714
Query: 521 GVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLL 580
VFP ASSHALP+ YR LM DP SPI+DFYP +FE+D +G R++WQ +A LPFIDE RLL
Sbjct: 715 AVFPPASSHALPQAYRNLMLDPKSPIADFYPREFELDFDGARFAWQAVALLPFIDETRLL 774
Query: 581 DEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLD 621
+ +E TLTEEE RRN+ ++L V HPL+ + LD
Sbjct: 775 TAIAPLESTLTEEERRRNARGVNLLHVHQRHPLALQVVPLD 815
Score = 221 bits (563), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 140/312 (44%), Positives = 190/312 (60%), Gaps = 32/312 (10%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRF+++K ++ + FDSNVITPGT FM L
Sbjct: 154 MNQQRSRRFKSAKVCLNAVLWWGCVVGGGGVCISV----CVCVTFDSNVITPGTPFMDKL 209
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+ +IH ++++DPGW IKVILSDA VPGEGEHKIM ++R QR P YD NT H ++
Sbjct: 210 AEYLRCFIHEKVSSDPGWTGIKVILSDATVPGEGEHKIMDFIRRQRAHPEYDANTSHVIH 269
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLI+LALATHE HF+ILRE V TP ++K Q +AA A R+
Sbjct: 270 GLDADLILLALATHEPHFTILREEV-TPRNREK---SAQEKAMAA----LAVRR------ 315
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFE----IDLECIVDDFIFMCFFVGND 236
V + + FL + LREYL+ E R+ + F DLE ++DDF+FMC FVGND
Sbjct: 316 ----VCI----WIFLQVNVLREYLEKEMRVAD--FSAAGGFDLERVIDDFVFMCCFVGND 365
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLPH+P+L+I EGAI+ ++ +Y+K+F A GGYLT S+ +L RV+ + + E++I
Sbjct: 366 FLPHLPSLKINEGAIDTILDLYRKDFPAFGGYLTQSSEVNLERVQLLLHGLAEVENKILS 425
Query: 297 KRARLHQRHAER 308
R QR ++
Sbjct: 426 DRRFKEQRRKQK 437
>gi|258571185|ref|XP_002544396.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237904666|gb|EEP79067.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 1372
Score = 235 bits (599), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 167/488 (34%), Positives = 243/488 (49%), Gaps = 70/488 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA E +++ REG ++P K D+ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRARRFRTALDA-------EMAKEKAIREGVEMP-KEDA--FDSNCITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+I+ +++ D W+ ++VILS VPGEGEHKIM Y+R + PGYDPN RHCLY
Sbjct: 144 TKQLKYFINKKVSEDAEWQGVEVILSGHEVPGEGEHKIMEYIRQSKAQPGYDPNVRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+Q +++K E +
Sbjct: 204 GLDADLIMLGLLSHDPHFCLLREEV-TFGRQ-------------------SQKKVKELEH 243
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNP----PFEIDLECIVDDFIFMCFFVGND 236
+ + LH+ +REYL+ EF+ F+ D+E I+DDFI M FFVGND
Sbjct: 244 QN---------FYLLHLCIVREYLELEFQELEVEGALKFDFDMERIIDDFILMAFFVGND 294
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP++P L I EGA+ + VYK+ L GY+ + + +L R+ + ++G E R F+
Sbjct: 295 FLPNLPNLHINEGALAWMFKVYKEVLPKLDGYINERGRINLDRLGVLLDSLGDVEFRFFE 354
Query: 297 KRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSEC 356
A IK ++ D+ + ++ P + S++ S P
Sbjct: 355 A----EYSDARWIKSKQNVGEEVQDISRDPKTLTISPAQKHILSKVKKYISHCPVNDDGQ 410
Query: 357 VGRLDNGKGTSGRPHK-VPRLSSGATIGAAIVEAE---------------NSFETDPQEN 400
LD R K V +L+ I A V + + + D +
Sbjct: 411 SIPLDLSPSLPARDRKFVEQLADDLRIPWASVANDHGDRFLRLQLPSNQRTANDDDSGDE 470
Query: 401 KEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPG-------WKERYYEEKFNAKTPEER 453
EE + + +L+ +A + ED + E WK +YY+EKF T E
Sbjct: 471 DEEAQIAVLRVLKKYDNATVKETTAEDAQQAAEKKYEQKFQEWKNKYYQEKFEWGTDNEE 530
Query: 454 EETRKDVV 461
E K +V
Sbjct: 531 EMRNKKIV 538
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 73/136 (53%), Gaps = 8/136 (5%)
Query: 531 LPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTL 590
+PE Y LMT P+SPI DFYP DFE+DMNGK+ W+ + K+PFI+E RLL+ + EH L
Sbjct: 538 VPEAYHSLMTSPDSPIIDFYPRDFELDMNGKKMEWEAVVKIPFINETRLLNAMATKEHLL 597
Query: 591 TEEEARRNSIMADMLF-----VLLSHPLS-ASIYTLDEHCKQLKIKERVEVKERLNP--E 642
T EE RNS + F + ++P S I+ C ++ + E L P
Sbjct: 598 TPEEKSRNSFGVTLKFTHSPDIEFTYPSSLVGIFPDIPKCHCIENVYELPTMEGLEPYVG 657
Query: 643 LSDGMNGYISPCAGDP 658
L DG + AG P
Sbjct: 658 LVDGAKVGVEALAGFP 673
>gi|358055066|dbj|GAA98835.1| hypothetical protein E5Q_05523 [Mixia osmundae IAM 14324]
Length = 1437
Score = 235 bits (599), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 131/302 (43%), Positives = 177/302 (58%), Gaps = 46/302 (15%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR +K+A ++ R R+G +LP K D FDSN ITPGT FM L
Sbjct: 94 MNQQRSRRFRTAKEAKEA-------RDAAIRKGEELP-KEDP--FDSNAITPGTPFMTRL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S L+Y+++ +++ D W+ I+VILS VPGEGEHKIM ++R + PGY+PN RHCLY
Sbjct: 144 SAQLRYFVNKKVSEDADWQGIQVILSGHEVPGEGEHKIMQFIRHSKAQPGYNPNVRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADLIML L +H+ HF +LR EVVF GKA++ + +
Sbjct: 204 GLDADLIMLGLLSHDPHFCLLREEVVF----------------------GKARKTSQSLE 241
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRI----PNPPFEIDLECIVDDFIFMCFFVGN 235
K + LH+ REYLD EF+ P F+ DLE I+DDFI + FVGN
Sbjct: 242 TKN---------FYLLHLSLFREYLDLEFQSLAADPTLGFQYDLERIIDDFILLAIFVGN 292
Query: 236 DFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 295
DFLPH+P L I EGA+ LL +YK+ GGY+ + + + R+ ++ + S+E F
Sbjct: 293 DFLPHLPGLHINEGALTLLFEIYKRVLPKAGGYINEHGQLNTHRLSLILEELQSFESDNF 352
Query: 296 QK 297
+K
Sbjct: 353 EK 354
Score = 186 bits (473), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/225 (43%), Positives = 134/225 (59%), Gaps = 19/225 (8%)
Query: 395 TDPQENKEEFKAKLKELLR--DKSDA---FNSDNPEED---KVKLGEPGWKERYYEEKFN 446
+ P E+ +E+K + +L DK+ FN + E+ K++ WK YY +K
Sbjct: 493 SSPHED-DEWKEAISRILAKYDKAQTLPDFNEADFEDSYAQKLEQKMSAWKTDYYRDKL- 550
Query: 447 AKTPEEREETRK----DVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQ 502
E E T K + RY EGL WV+HYYY+GV SW WFY YHYAP SDL+++D
Sbjct: 551 -----EFEFTDKPALHQLAFRYIEGLQWVLHYYYDGVASWGWFYDYHYAPKISDLQNVDH 605
Query: 503 FNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKR 562
F+LG PFKPF QL+GV P S+ LPE YR L+T P SPI DFYP DF++D+NGK+
Sbjct: 606 MEFVFDLGRPFKPFEQLMGVLPDLSATILPEAYRDLLTSPESPIKDFYPRDFKLDLNGKK 665
Query: 563 YSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
W+ + K+PFID+ARLL ++ LT +E +RN+ +F
Sbjct: 666 QDWEAVVKIPFIDQARLLHAMEGRSARLTPDEQQRNTWGDSYIFT 710
>gi|13278447|gb|AAH04028.1| Xrn2 protein [Mus musculus]
gi|148696567|gb|EDL28514.1| 5'-3' exoribonuclease 2, isoform CRA_b [Mus musculus]
Length = 561
Score = 235 bits (599), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 132/302 (43%), Positives = 179/302 (59%), Gaps = 21/302 (6%)
Query: 412 LRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWV 471
++ K++ +S+ ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV
Sbjct: 102 IKRKAEDSDSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWV 159
Query: 472 MHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHA 530
+ YYY+G SW+W+YP+HYAPFASD + + + FE G PFKP QL+GVFP+AS +
Sbjct: 160 LRYYYQGCASWKWYYPFHYAPFASDFEGIADMSSEFEKGTKPFKPLEQLMGVFPAASGNF 219
Query: 531 LPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTL 590
LP +RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ L
Sbjct: 220 LPPTWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDL 279
Query: 591 TEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGY 650
T EE RRNS+ D+LFV HPL I L Q E V+V PEL G+ G
Sbjct: 280 TPEENRRNSLGGDVLFVGKLHPLRDFILEL----YQTGSTEPVDVP----PELCHGIQGT 331
Query: 651 ISPCAGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLPD-AHKHV--------TRPPAGVI 700
S P SPV + D+ N + +K P A +V R PA V+
Sbjct: 332 FSLDEEAILPDQTVCSPVPMLRDLTQNTAVSINFKDPQFAEDYVFKAAMLPGARKPATVL 391
Query: 701 FP 702
P
Sbjct: 392 KP 393
>gi|443895364|dbj|GAC72710.1| predicted hydrolases or acyltransferases [Pseudozyma antarctica
T-34]
Length = 1939
Score = 234 bits (598), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 130/300 (43%), Positives = 173/300 (57%), Gaps = 44/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR +K+A + ++++ ER G LP D + FDSN ITPGT FMA L
Sbjct: 243 MNQQRSRRFRTAKEA-------KEIKEKAERRGEILP---DEEAFDSNCITPGTPFMAKL 292
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S L+Y+I ++ D W ++VILS +VPGEGEHKIM Y+RL + PGY+PN RHCLY
Sbjct: 293 SQQLEYFIAKKITEDADWRNVQVILSGHDVPGEGEHKIMEYIRLCKAQPGYNPNVRHCLY 352
Query: 121 GLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADLIML L +H+ HF +LRE V F P ++ K L Q
Sbjct: 353 GLDADLIMLGLLSHDPHFCLLREEVQFGPRRKSKGSLESQN------------------- 393
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
+ LH+ REYLD EF+ + PF + E I+DDFI + FVGNDF
Sbjct: 394 ------------FFLLHLSLFREYLDLEFQDLRSSLPFPYEFERIIDDFILLNIFVGNDF 441
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
LPH+P L I EGA++LL +YK+ GGYL + R+E + + ++E F++
Sbjct: 442 LPHLPGLHINEGAMDLLFGIYKQILPVAGGYLNESGHLRTDRLELVLAELRNFEMEQFER 501
Score = 199 bits (507), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 95/196 (48%), Positives = 127/196 (64%), Gaps = 7/196 (3%)
Query: 408 LKELLRDKSDAFNSDN--PEED---KVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVL 462
L L+ K D + D+ PEED ++ WK+ YY++K + +E +
Sbjct: 666 LGRYLKAKVDTASDDDVDPEEDYRKRLDAQMTEWKKDYYKQKL--EFDYSNDEAMSKLAF 723
Query: 463 RYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGV 522
RY EGL WV+HYYY+GV SW WFY YHYAP SDLK++ Q FELG PF+PF+QL+GV
Sbjct: 724 RYIEGLQWVLHYYYDGVASWGWFYDYHYAPKISDLKNVGQMKFEFELGKPFRPFDQLMGV 783
Query: 523 FPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDE 582
P+ S+ +P +R LMTDPNSPI DFYP++FE D+NGK+ W+ + K+PFIDE RLL+
Sbjct: 784 LPALSNQHIPTAFRDLMTDPNSPIIDFYPSNFEADLNGKKQDWEAVVKIPFIDEKRLLEA 843
Query: 583 VKKIEHTLTEEEARRN 598
+ K E L EE +RN
Sbjct: 844 LDKREVYLGIEERKRN 859
>gi|443920066|gb|ELU40060.1| exonuclease Kem1, putative [Rhizoctonia solani AG-1 IA]
Length = 1536
Score = 234 bits (597), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 131/333 (39%), Positives = 188/333 (56%), Gaps = 46/333 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPG-----TE 55
MNQQR+RRFR +KDA ++ R++ E++G KLP + + FDSN ITPG T
Sbjct: 422 MNQQRARRFRTAKDAKEA-------REKAEKKGEKLP---EEKAFDSNCITPGMHPLGTV 471
Query: 56 FMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNT 115
FM LS L+Y+++ +++ D W +++V+LS VPGEGEHKIM Y+RL + P YDPN
Sbjct: 472 FMKKLSEQLKYFVNKKISEDANWREVQVVLSGHEVPGEGEHKIMEYIRLSKAQPDYDPNV 531
Query: 116 RHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKA 175
RHCLYGLDADLIML L +H+ HF +LRE V Q++K
Sbjct: 532 RHCLYGLDADLIMLGLLSHDPHFCLLREEVKFGPQKNKS--------------------- 570
Query: 176 GEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFV 233
KG + + + LHI LREYLD EF+ PF+ DLE I+DDF+ + F+
Sbjct: 571 -----KGS---LETQSFYLLHISLLREYLDLEFQSLTSTLPFQYDLERIIDDFVLIAVFI 622
Query: 234 GNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDR 293
GNDFLPH+P L I E A+ L +YK GGYL + + R++ + + ++E
Sbjct: 623 GNDFLPHLPDLHIHENALERLFEIYKAVLPNAGGYLNESGEIHRGRLQLILDELATWEVD 682
Query: 294 IFQKRARLHQRHAERIKREKAQARRGDDVEPLA 326
+F+K Q + + ++ + QA +PL+
Sbjct: 683 VFEKETSDSQWYKGKQRKHQQQAAEKSKSKPLS 715
Score = 206 bits (523), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 94/178 (52%), Positives = 123/178 (69%), Gaps = 3/178 (1%)
Query: 422 DNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCS 481
D E+D++K WKE YY+EK K + E+ +V RY EGL WVM+YYY GV S
Sbjct: 816 DEREDDRLKAALKKWKEDYYKEKLEFK---DIEKGVDQLVYRYIEGLQWVMYYYYRGVAS 872
Query: 482 WQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTD 541
W WFY YHYAP SD+K+++ F ++ELG PFKPF QL+GV P AS +PE YR+LM
Sbjct: 873 WGWFYDYHYAPRISDIKNIELFEFNYELGKPFKPFEQLMGVLPYASHELIPEAYRELMHS 932
Query: 542 PNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 599
+SPI DFYP +F++DMNGK+ W+ + K+PFID+ RLL + +EH LTEEE RRN+
Sbjct: 933 EHSPILDFYPENFDLDMNGKKQEWEAVVKVPFIDQKRLLSSMATLEHRLTEEEKRRNT 990
>gi|380483599|emb|CCF40522.1| 5'-3' exoribonuclease, partial [Colletotrichum higginsianum]
Length = 553
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 167/505 (33%), Positives = 242/505 (47%), Gaps = 71/505 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + D E+ R + EG ++P + FDSN ITPGTEFMA L
Sbjct: 95 MNQQRARRFRTALDT-------EKARDKAISEGVEMPKEPP---FDSNCITPGTEFMAKL 144
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+++ +++ D W+ +++LS VPGEGEHKIM Y+R + P YDPN RHCLY
Sbjct: 145 TQQLKYFVNKKVSEDADWQGCEIVLSGHEVPGEGEHKIMEYIRNAKAQPDYDPNVRHCLY 204
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+ +K K E +
Sbjct: 205 GLDADLIMLGLLSHDPHFCLLREEV-TFGRVNKA-------------------KTRELEH 244
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGND 236
+ + LH+ +REYL+ EF+ P F DLE ++DDFI M FFVGND
Sbjct: 245 QN---------FYLLHLCIVREYLELEFQELQQPGRLSFPFDLERVIDDFILMAFFVGND 295
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP++P L I EGA+ + +YK GY+ +G +L R++ + + E F+
Sbjct: 296 FLPNLPRLHINEGALAAMFRIYKSVLPQGDGYINEGGVINLPRLQRLLNELAKDETNQFE 355
Query: 297 KRARLHQR-HAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSE 355
+ ++++ R + L S + + + PSP P
Sbjct: 356 NDVSDEKWFQSKKLTEPNGADNRRPKGKGLVLTSSQRDLWKQQIRPYVNKPSPEP----- 410
Query: 356 CVGRLDNGKGTSGRPHK-VPRLSSGATIGAAIVEAEN-------SFETDPQENKEEF--- 404
LD G G + K V L+ I + E + SF + EE
Sbjct: 411 ----LDLGTGLNAADRKFVQDLADTLHIEWSTKEDDEGHRHLLLSFPKGAENVNEEEEEG 466
Query: 405 KAKLKELLRDKSDAFNSDNPEEDKVKLGEP-------GWKERYYEEKFNAKTPEEREETR 457
L ++R A D ED + + GWK +YY +KF PE+ +
Sbjct: 467 TLALYRVMRTYDKATVVDVSGEDAQRQYKELYDQKYLGWKTKYYLQKFPEWAPEQYDAEL 526
Query: 458 KDVVLRYTEGLCWVMHYYYEGVCSW 482
+ Y +GL WV++YYY G+ SW
Sbjct: 527 TKLCENYVQGLQWVLYYYYRGIASW 551
>gi|307106569|gb|EFN54814.1| hypothetical protein CHLNCDRAFT_24310, partial [Chlorella
variabilis]
Length = 326
Score = 234 bits (596), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 137/227 (60%), Positives = 161/227 (70%), Gaps = 12/227 (5%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+++A + EEE+LR EF ++G K+P K +S VFDSNVITPGT FM L
Sbjct: 111 MNQQRSRRFRAAQEAEEREKEEEKLRDEFAKQGIKVP-KKESAVFDSNVITPGTPFMHRL 169
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S+ALQYYIHLRLN DPGW IKVILSDAN PGEGEHKIM+Y+R QR LPGY PNTRHC+Y
Sbjct: 170 SVALQYYIHLRLNADPGWRGIKVILSDANSPGEGEHKIMAYIREQRGLPGYSPNTRHCIY 229
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEG-KAKRKAGEFD 179
GLDADLIMLALATHE F+ILREV C+ G C G +A R G
Sbjct: 230 GLDADLIMLALATHEPRFAILREV--------GCWQGWGAGRGGVGCWGARAGRDGGAGM 281
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDF 226
+ G + V KKPYQFL + LREYL+ + R+ + PF D E + DDF
Sbjct: 282 QVGG-MWVAKKPYQFLLVGVLREYLERDLRV-HTPFPWDKERVYDDF 326
>gi|159115185|ref|XP_001707816.1| 5'-3' exoribonuclease 2 [Giardia lamblia ATCC 50803]
gi|157435923|gb|EDO80142.1| 5'-3' exoribonuclease 2 [Giardia lamblia ATCC 50803]
Length = 902
Score = 232 bits (592), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 143/338 (42%), Positives = 196/338 (57%), Gaps = 40/338 (11%)
Query: 1 MNQQRSRRFRASKD-AADSAAEEERL-------------RQEFEREGRKLPPKSDSQVFD 46
+NQQRSRRF A+ + A+E RL + FE EG + +++ V D
Sbjct: 107 LNQQRSRRFMAAYERQIKQRAQERRLMNMNLGDAEPSLKKLSFE-EGNAMDTSTEN-VLD 164
Query: 47 SNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQR 106
SN ITPGT FM+ LS+AL+YY+ R N W + V+ +DA PGEGEHKIMS+VR+QR
Sbjct: 165 SNAITPGTPFMSRLSVALKYYVANRQANSKLWRHLTVLYADAWSPGEGEHKIMSFVRIQR 224
Query: 107 NLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAAN 166
+ PGYDP T HC+YGLDADLIMLAL THE +F ILR+VV T + C C GHL +
Sbjct: 225 SQPGYDPCTVHCIYGLDADLIMLALGTHEPNFLILRDVVDTDNLKRTCTRC---GHLRVS 281
Query: 167 CEGKAKR----KAGEFDEKGDEV----------VVPKKPYQFLHIWTLREYLDYEFRIPN 212
E + D+ G + V + P+QFLH+ LREYL EF +
Sbjct: 282 SEYRTGTVDPFTTRHEDQGGIDCPFYPGSSLRPVAFRSPFQFLHVSRLREYLQREFDAAD 341
Query: 213 PPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALG-GYLTD 271
FE +DDF+F+ F VGNDFLPH+ L+IRE A+ ++ YK+ R+ G+LT
Sbjct: 342 VIFER----AIDDFVFLTFLVGNDFLPHIQCLDIREDAVIRMIYFYKQLKRSRKIGFLTT 397
Query: 272 GSKPSLRRVEHFIQAVGSYEDRIFQKRA--RLHQRHAE 307
GS ++ + F++ + E RIF+ RA +L+ RH++
Sbjct: 398 GSDVNMEDLHIFLKELAEQEARIFRARASGKLNARHSQ 435
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 104/202 (51%), Gaps = 17/202 (8%)
Query: 428 KVKLGEPGWKERYY-----EEKF---NAKTPEEREETRKDV---VLRYTEGLCWVMHYYY 476
K +L +PG+ +RYY + F N ++ + E RK + Y +GL WV YY+
Sbjct: 495 KYELEKPGYAQRYYLGIGLMDDFPETNQESDTFKAELRKRIQTMCYHYIDGLIWVFRYYF 554
Query: 477 E-GVCSWQWFYPYHYAPFASDLKDLDQFNISFELGH-----PFKPFNQLLGVFPSASSHA 530
V W W+YPYH++P +DL Q H PF P+ QLL V P AS+
Sbjct: 555 LPKVEDWGWYYPYHHSPLLADLASASQTYTRTWKQHTVSNRPFNPYEQLLAVMPPASAAL 614
Query: 531 LPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTL 590
LP R LMTDP S ++ FYP+ + D++ K W+G+ LPFI+ + L+ +K L
Sbjct: 615 LPPVMRCLMTDPASILNKFYPSLIKCDLSEKTALWKGVLLLPFINSSELISAAQKSYDQL 674
Query: 591 TEEEARRNSIMADMLFVLLSHP 612
T E +RN + ++ + HP
Sbjct: 675 TPLEQQRNRLSDPIILIHKDHP 696
>gi|221054456|ref|XP_002258367.1| exoribonuclease [Plasmodium knowlesi strain H]
gi|193808436|emb|CAQ39139.1| exoribonuclease, putative [Plasmodium knowlesi strain H]
Length = 1324
Score = 232 bits (591), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 131/349 (37%), Positives = 193/349 (55%), Gaps = 38/349 (10%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRF++ + LR++F E R++P + +DSN+ITPGT+FM L
Sbjct: 137 MNQQRSRRFKSILCSEIERKAYIELREKFLSENREVP--EEFTFWDSNIITPGTQFMYEL 194
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S+AL+Y++ ++ ND W+ I VI SDANV GEGEHKI ++++ QR PGYDPNTRH ++
Sbjct: 195 SVALKYFVEHKITNDDKWKNIVVIFSDANVCGEGEHKIYNFIKSQRGQPGYDPNTRHVIH 254
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQ-----QDKCFLCGQPGHLAAN-----CEGK 170
G+DADLIML+LA+HE +F ILRE++ + QDK F+ G L + C
Sbjct: 255 GMDADLIMLSLASHEPYFYILREIIILDSKGEEKVQDKDFV----GKLKSKQDLPLCTTH 310
Query: 171 AKRKAGEFDEKGD--EVVVPKKP-----------YQFLHIWTLREYLDYEFRIPNPPFEI 217
++ + + D + K P Q L + LREYL EF +
Sbjct: 311 MRKTKKIYTKYNDPHYANINKSPNYSINDENWNELQILDLTILREYLSKEFFFDS---SY 367
Query: 218 DLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSL 277
+LE +DDFIF+CF GNDFLPH+P++ I G+I+ L+ +Y+K LG YL + K +L
Sbjct: 368 NLERCIDDFIFICFLCGNDFLPHLPSISIAAGSIDQLVLLYQKVLPVLGDYLINEGKINL 427
Query: 278 RRVEHFIQAVGSYEDRI------FQKRARLHQRHAERIKREKAQARRGD 320
+ ++ + E F+K+ + + +KR K D
Sbjct: 428 KPFSKYVSFIAEVERETFISQYDFKKKREKRDQQKDSLKRVKCTDEEND 476
Score = 177 bits (448), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 93/229 (40%), Positives = 137/229 (59%), Gaps = 9/229 (3%)
Query: 393 FETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKE----RYYEEKFNAK 448
ET + EF L+E ++ A ++P+ED V+LG E +YY+ KF+
Sbjct: 682 METKRINDINEFNMLLREAVKK---AGKCEHPKED-VELGCDENPEVIRIKYYKAKFHLD 737
Query: 449 TPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFE 508
+ ++ K+VV +Y EGL WV+ YY++ W W+YPY+YAP +SDL +D N F+
Sbjct: 738 ETDYIDDFVKEVVYKYIEGLAWVLSYYFQSCPMWHWYYPYYYAPLSSDLI-IDNVNFIFQ 796
Query: 509 LGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGI 568
P P QLL V PS SSH LP+ YR+LM P+SPI DFYP F+ + NGK+Y +Q +
Sbjct: 797 KDEPILPLEQLLCVLPSNSSHCLPKGYRELMVRPDSPIIDFYPKTFKEEENGKKYKYQWV 856
Query: 569 AKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASI 617
LPF+D+ R++ +++ TLTEEE +RN + +++ SHPLS I
Sbjct: 857 ILLPFVDKERIIKHARELNDTLTEEEKKRNRRGMNKIYMNCSHPLSKQI 905
>gi|145347657|ref|XP_001418279.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578508|gb|ABO96572.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 509
Score = 231 bits (589), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 132/272 (48%), Positives = 161/272 (59%), Gaps = 38/272 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR++ +AA EE R R E P+ + + FDSN ITPGTEFMA L
Sbjct: 94 MNQQRSRRFRSAAEAAKDR-EEARARGE---------PEPEGEPFDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L++Y+ + DP W K+ VILS V GEGEHKIM ++R R P ++PN HCLY
Sbjct: 144 TEHLKFYVRKKQTEDPLWAKVTVILSGHEVRGEGEHKIMEHIRWARTQPDWEPNQTHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVV-FTPGQQDKCFLCGQPG-HLAANCEGKAKRKAGEF 178
GLDADLIMLAL THE HF +LREVV F G++ GQP + +N
Sbjct: 204 GLDADLIMLALVTHEPHFCLLREVVKFGGGEK------GQPSREILSNPTDDG------- 250
Query: 179 DEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFL 238
+ LHI LREYLD EFR N PF +LE ++DDFI +C VGNDFL
Sbjct: 251 -------------FILLHIGLLREYLDLEFREKNLPFGYELERVIDDFILLCMLVGNDFL 297
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLT 270
P +PTL I EGA+N L VY LGGY+T
Sbjct: 298 PALPTLNIAEGALNTLFKVYHDTLPMLGGYIT 329
Score = 149 bits (376), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 71/149 (47%), Positives = 90/149 (60%), Gaps = 3/149 (2%)
Query: 432 GEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYA 491
G WK+ YY EK K E ++ Y +GL WV+ YYY GV SW W+YPYHYA
Sbjct: 363 GLQAWKDTYYREKLGLKIGEA--APLGEIRQAYFDGLNWVLRYYYRGVASWTWYYPYHYA 420
Query: 492 PFASDL-KDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFY 550
P ASDL + F+ G PFKPF QL+ V P +SS LPE +R M DP SP+++F+
Sbjct: 421 PMASDLCAGMGGLTSEFDYGEPFKPFEQLMAVQPPSSSKLLPEPFRHFMEDPQSPLAEFF 480
Query: 551 PTDFEVDMNGKRYSWQGIAKLPFIDEARL 579
P D +VD GKR W+G+ LPF+D RL
Sbjct: 481 PEDIKVDFEGKRNDWEGVVLLPFLDADRL 509
>gi|343426938|emb|CBQ70466.1| probable KEM1-multifunctional nuclease [Sporisorium reilianum SRZ2]
Length = 1481
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 128/300 (42%), Positives = 172/300 (57%), Gaps = 44/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR +K+A + ++++ ER G LP + + FDSN ITPGT FMA L
Sbjct: 94 MNQQRSRRFRTAKEA-------KEIKEKAERRGEVLP---EEEAFDSNCITPGTPFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S L+Y+I ++ D W ++VILS +VPGEGEHKIM Y+RL + P Y+PN RHCLY
Sbjct: 144 SQQLEYFIAKKITEDADWRNVQVILSGHDVPGEGEHKIMEYIRLSKAQPDYNPNVRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADLIML L +H+ HF +LRE V F P ++ K L Q
Sbjct: 204 GLDADLIMLGLLSHDPHFCLLREEVQFGPRRKSKGSLESQN------------------- 244
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
+ LH+ REYLD EF+ + PF + E I+DDFI + FVGNDF
Sbjct: 245 ------------FFLLHLSLFREYLDLEFQDLRSSLPFPYEFERIIDDFILLNIFVGNDF 292
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
LPH+P L I EGA++LL +YK+ GGYL + R+E + + ++E F++
Sbjct: 293 LPHLPGLHINEGAMDLLFTIYKQILPVAGGYLNESGTLRTDRLELVLSELCNFEMEQFER 352
Score = 199 bits (506), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 95/196 (48%), Positives = 126/196 (64%), Gaps = 7/196 (3%)
Query: 408 LKELLRDKSDAFNSD--NPEED---KVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVL 462
L L+ K D + D +PEED ++ WK+ YY+EK + + ++ +
Sbjct: 508 LSRYLKAKVDTASDDEVDPEEDYKQRLATQMAAWKKDYYKEKLEIDYNNDDDMSK--LAF 565
Query: 463 RYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGV 522
RY EGL WV+HYYY+GV SW WFY YHYAP SDLK+ Q FELG PF+PF+QL+GV
Sbjct: 566 RYIEGLQWVLHYYYDGVASWGWFYDYHYAPKISDLKNAGQMKFEFELGKPFRPFDQLMGV 625
Query: 523 FPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDE 582
P+ SS +P +R L+TDPNSPI DFYP +FE D+NGK+ W+ + K+PFIDE RLL+
Sbjct: 626 LPALSSQHIPTAFRDLVTDPNSPIIDFYPNNFEADLNGKKQDWEAVVKIPFIDEKRLLEA 685
Query: 583 VKKIEHTLTEEEARRN 598
+ K E L EE +RN
Sbjct: 686 LDKREVYLGIEERKRN 701
>gi|71005096|ref|XP_757214.1| hypothetical protein UM01067.1 [Ustilago maydis 521]
gi|46096576|gb|EAK81809.1| hypothetical protein UM01067.1 [Ustilago maydis 521]
Length = 1478
Score = 230 bits (587), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 128/300 (42%), Positives = 172/300 (57%), Gaps = 44/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR +K+A + ++++ E G LP + + FDSN ITPGT FMA L
Sbjct: 94 MNQQRSRRFRTAKEA-------KEIKEKAESRGEVLP---EEEAFDSNCITPGTPFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S L+Y+I ++ D W ++VILS +VPGEGEHKIM Y+RL + P Y+PN RHCLY
Sbjct: 144 SQQLEYFIAKKITEDADWRNVQVILSGHDVPGEGEHKIMEYIRLSKAQPDYNPNVRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADLIML L +H+ HF +LR EV F P ++ K L Q
Sbjct: 204 GLDADLIMLGLLSHDPHFCLLREEVQFGPRRKSKGSLEMQ-------------------- 243
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
+ LH+ REYLD EF+ + PF D E I+DDFI + FVGNDF
Sbjct: 244 -----------NFFLLHLSLFREYLDLEFQDLRSSLPFPYDFERIIDDFILLNIFVGNDF 292
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
LPH+P L I +GA++LL +YK+ A GGYL + R+E + + ++E F++
Sbjct: 293 LPHLPGLHINQGAMDLLFNIYKRILPAAGGYLNESGTLRTDRLELVLSELRNFEMEQFER 352
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 99/196 (50%), Positives = 126/196 (64%), Gaps = 7/196 (3%)
Query: 408 LKELLRDKSDAFNSD--NPEEDKVKLGEP---GWKERYYEEKFNAKTPEEREETRKDVVL 462
L L+ K D + D +PEED K E WK+ YY+EK + +E +
Sbjct: 504 LIRYLKAKVDTASDDEADPEEDYKKRLEAQMTAWKQSYYKEKL--EIDYNNDEAMSKLAF 561
Query: 463 RYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGV 522
RY EGL WV+HYYY+GV SW WFY YHYAP SDLK++ Q F LG PF+PF+QL+GV
Sbjct: 562 RYIEGLQWVLHYYYDGVASWGWFYDYHYAPKISDLKNVGQMKFEFTLGKPFRPFDQLMGV 621
Query: 523 FPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDE 582
P+ SS +P +R LMTDPNSPI DFYPT+FE D+NGK+ W+ + K+PFIDE RLL+
Sbjct: 622 LPALSSQHIPSAFRDLMTDPNSPIIDFYPTNFEADLNGKKQDWEAVVKIPFIDEKRLLEA 681
Query: 583 VKKIEHTLTEEEARRN 598
+ K E L EE +RN
Sbjct: 682 LDKREVYLGIEERKRN 697
>gi|156097196|ref|XP_001614631.1| exoribonuclease [Plasmodium vivax Sal-1]
gi|148803505|gb|EDL44904.1| exoribonuclease, putative [Plasmodium vivax]
Length = 1353
Score = 229 bits (585), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 128/345 (37%), Positives = 196/345 (56%), Gaps = 30/345 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRF++ + +LR++F E R +P + +DSN+ITPGT+FM L
Sbjct: 145 MNQQRSRRFKSILCSEIERNAYIQLREKFLSENRVVP--EEFTFWDSNIITPGTQFMYEL 202
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S+AL+Y++ ++ ND W+ I VI SDANV GEGEHKI ++++ QR PGYDPNTRH ++
Sbjct: 203 SVALKYFVEHKITNDEKWKNIVVIFSDANVCGEGEHKIFNFIKSQRAQPGYDPNTRHVIH 262
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQ-----QDKCFL----CGQPGHLAANCEGKA 171
G+DADLIML+LA+HE +F ILRE++ + Q+K F+ Q L K
Sbjct: 263 GMDADLIMLSLASHEPYFYILREIIILDSKGEEKVQNKDFVGMLKSKQDLPLCTTHMRKT 322
Query: 172 KRKAGEFDE-------KGDEVVVPKKPY---QFLHIWTLREYLDYEFRIPNPPFEIDLEC 221
KR ++++ + ++ + + Q L + LREYL +F + +LE
Sbjct: 323 KRMYTKYNDPHYANISRSHNCLINSENWNELQILDLTILREYLSKDFFFDST---YNLER 379
Query: 222 IVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVE 281
+DDFIF+CF GNDFLPH+P++ I G+I+ L+ +Y+K LG YL + K +L+
Sbjct: 380 CIDDFIFICFLCGNDFLPHLPSISIAAGSIDQLVLLYQKVLPVLGDYLINEGKINLKPFS 439
Query: 282 HFIQAVGSYEDRI------FQKRARLHQRHAERIKREKAQARRGD 320
++ + E F+K+ + + +KR K + D
Sbjct: 440 KYVSFIAEVERETFISQYDFKKKREKRDQQKDSLKRVKCTDEQND 484
Score = 178 bits (451), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/240 (39%), Positives = 144/240 (60%), Gaps = 10/240 (4%)
Query: 394 ETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKE----RYYEEKFNAKT 449
ET + EF LKE ++ ++ +NP+ED V+LG E +YY+ KF+
Sbjct: 657 ETKRINDINEFNMLLKEAIKKANEC---ENPKED-VELGGDENPELIRIKYYKSKFHLDE 712
Query: 450 PEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFEL 509
+ ++ K+VV +Y EGL WV+ YY++ W W+YPY+YAP +SDL +D N +F+
Sbjct: 713 TDYVDDFVKEVVYKYIEGLAWVLSYYFQSCPMWHWYYPYYYAPLSSDLI-IDNVNFTFQK 771
Query: 510 GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIA 569
P P QLL V PS SSH LP+ YR+LM +SPI DFYP F+ + NGK+Y +Q +
Sbjct: 772 DEPILPLEQLLCVLPSNSSHCLPKGYRELMVRHDSPIIDFYPKTFKEEENGKKYKYQWVI 831
Query: 570 KLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIY-TLDEHCKQLK 628
LPF+D+ R++ +++ TLTEEE +RN + +++ SH LS I ++ + K++K
Sbjct: 832 LLPFVDKERIIKHARELNDTLTEEEKKRNRRGMNKIYMNCSHALSKQITKSIKAYVKEMK 891
>gi|395510133|ref|XP_003759335.1| PREDICTED: 5'-3' exoribonuclease 2-like, partial [Sarcophilus
harrisii]
Length = 349
Score = 229 bits (585), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 120/277 (43%), Positives = 170/277 (61%), Gaps = 12/277 (4%)
Query: 412 LRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWV 471
++ K++ +S+ ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV
Sbjct: 22 IKRKAEDSDSEPEPEDNVRLWESGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWV 79
Query: 472 MHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHA 530
+ YYY+G SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS +
Sbjct: 80 LRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTRPFKPLEQLMGVFPAASGNF 139
Query: 531 LPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTL 590
LP +RKLM+DP S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ L
Sbjct: 140 LPPSWRKLMSDPESSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDL 199
Query: 591 TEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGY 650
T +E RRNS+ D++FV HPLS + +L E + L PEL G+ G
Sbjct: 200 TPDETRRNSLGGDVMFVGKHHPLS-------DFLSELYKTGSTEAVD-LPPELCHGIQGK 251
Query: 651 ISPCAGDPHPP-VFRSPVASMEDIMGNQVLCAIYKLP 686
++ P + SPV + D+ N + +K P
Sbjct: 252 LTLHEEAILPDQIVYSPVPVLRDLTQNTAISINFKDP 288
>gi|452981894|gb|EME81653.1| hypothetical protein MYCFIDRAFT_215434 [Pseudocercospora fijiensis
CIRAD86]
Length = 1239
Score = 229 bits (584), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 149/356 (41%), Positives = 198/356 (55%), Gaps = 52/356 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR + DA E+ R + EGR+LP K D FDSN ITPGTEFMA L
Sbjct: 95 MNQQRSRRFRTALDA-------EKARDKAIAEGRELP-KEDP--FDSNCITPGTEFMARL 144
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y++ +++ D W+ +++LS VPGEGEHKIM Y+R ++ YDPN RHCLY
Sbjct: 145 TQQLKYFVAKKVSEDGDWQGCEIVLSGHEVPGEGEHKIMEYIRQAKSQLDYDPNVRHCLY 204
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+Q GK+K + E
Sbjct: 205 GLDADLIMLGLLSHDPHFCLLREEV-TFGRQ-----------------GKSKSQDLE--- 243
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFR-------IPNPPFEIDLECIVDDFIFMCFFV 233
+ + LH+ +REYL+ EF+ + N PF D+E I+DDFI M FFV
Sbjct: 244 --------HQNFFLLHLCIVREYLELEFQELKEKGALGNLPF--DMERIIDDFILMAFFV 293
Query: 234 GNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDR 293
GNDFLP++P L I EGA+ L+ AVYKK GGY+ DG +L R+ ++ + E R
Sbjct: 294 GNDFLPNLPYLHINEGALALMFAVYKKILPKAGGYINDGGTINLERLALLLEELSDVEYR 353
Query: 294 IF----QKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASG 345
F Q L + + + ++G V Q + V RF SR ASG
Sbjct: 354 HFEAENQDAGWLKDKSIHKEDVMQKTKKKGVTVMSTNQKELYQKVKRFVNSRPASG 409
>gi|241602466|ref|XP_002405190.1| pacman protein, putative [Ixodes scapularis]
gi|215500574|gb|EEC10068.1| pacman protein, putative [Ixodes scapularis]
Length = 1112
Score = 229 bits (584), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 132/322 (40%), Positives = 187/322 (58%), Gaps = 44/322 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A A E++ L + G LP ++ FDSN I+PGT FMA L
Sbjct: 21 MNQQRGRRFRSAKEAL--ALEKQALSR-----GEVLPTEAR---FDSNCISPGTSFMANL 70
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+ ++ +++++DP W+++KV LS PGEGEHKIM ++R +R+ PGYDPNTRHCLY
Sbjct: 71 QEQLEQFVAMKISSDPLWQEVKVYLSGHQTPGEGEHKIMDFIRTERSKPGYDPNTRHCLY 130
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML +HE HF++LRE + +Q++ KR
Sbjct: 131 GLDADLIMLGTCSHEPHFALLREEIVYGKKQNQ------------------KR------- 165
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRIP--NPPFEIDLECIVDDFIFMCFFVGNDF 237
+ VP++ + LH+ LREYL YEF+ + PFE LE +VDD++ MCF VGNDF
Sbjct: 166 ----LNVPEEITFHLLHLSLLREYLSYEFQAVKDSLPFEFSLESLVDDWVLMCFLVGNDF 221
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
LPH+P L I A+ +L Y + LGGY+ + +L R E F++ + ++ F
Sbjct: 222 LPHLPNLHIAHNALPILYQAYIEVLPTLGGYINEQGTLNLERFEKFLKRLSQFDYEKFTD 281
Query: 298 RARLHQRHAERIKREKAQARRG 319
+ Q+ E KR A A G
Sbjct: 282 -VQADQKFLES-KRTAATAPNG 301
Score = 165 bits (417), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/293 (33%), Positives = 150/293 (51%), Gaps = 33/293 (11%)
Query: 419 FNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEG 478
+ SD E +++ K YY K K + +E ++ Y + W +HYYY G
Sbjct: 343 YESDEESEGTLEMEFRQHKRDYYTTKLEYK--DVNKEVMQEQAHGYVRAIQWNLHYYYNG 400
Query: 479 VCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKL 538
V SW W+YP+HY+P+ SD+KD ++SFELG PF PF QL+ + P+AS +P+ Y+ L
Sbjct: 401 VQSWNWYYPHHYSPYISDIKDFQSIDMSFELGKPFLPFQQLMSILPAASKGLVPKAYQAL 460
Query: 539 MTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
M SP+ D+YP DF D+NGK+ W+ + +PFIDE RLL +++++ LT+EE RN
Sbjct: 461 MEGEESPVLDYYPQDFTTDLNGKQQEWEAVVLIPFIDEDRLLPVMQELDSKLTDEERERN 520
Query: 599 SIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEV----------------KERLNPE 642
+ +LF P+++ CK + +EV KE +
Sbjct: 521 THGGHLLFTYSHEPVTSL------KCKNKGLLPNIEVNHARVEVLDKNIFRLPKEEIKKG 574
Query: 643 LSDGMNGYISPCAGDP---HPP----VFRSPVASMEDIMGNQ-VLCAIYKLPD 687
L DG+ I AG P H P + R+ V + + N+ VL + + PD
Sbjct: 575 LLDGVKTDIY-FAGFPTFRHLPHTAKLERASVKVFQSLSKNESVLLTLTETPD 626
>gi|238579002|ref|XP_002388906.1| hypothetical protein MPER_12027 [Moniliophthora perniciosa FA553]
gi|215450629|gb|EEB89836.1| hypothetical protein MPER_12027 [Moniliophthora perniciosa FA553]
Length = 653
Score = 228 bits (582), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 131/331 (39%), Positives = 186/331 (56%), Gaps = 46/331 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR +K+A + +R++ E +G KLP D + FDSN ITPGT FMA L
Sbjct: 80 MNQQRSRRFRTAKEARE-------VREKAEAKGEKLP---DEKAFDSNCITPGTSFMAKL 129
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S L+Y+++ ++ D W ++V+LS VPGEGEHKIM Y+RL R P Y+PN RHCLY
Sbjct: 130 SEQLRYFVNKKITEDSNWRNVEVVLSGHEVPGEGEHKIMEYIRLSRAQPDYNPNMRHCLY 189
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V G A++K E
Sbjct: 190 GLDADLIMLGLLSHDPHFCLLREEVKF---------------------GPARKKTNNSLE 228
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFL 238
+ + LH+ REYLD EF P PF LE ++DDFI + FVGNDFL
Sbjct: 229 SIN--------FYLLHLSLFREYLDTEFHSIAPALPFPYSLERVIDDFILLAVFVGNDFL 280
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 298
P++P L I E + + VYK+ +L GY+ D ++ R++ + + ++E +F+K
Sbjct: 281 PNLPDLHIHENGLERIFEVYKRVLPSLDGYVNDSGTINMPRLQCILDEMATWEQEVFEKE 340
Query: 299 ----ARLHQRHAERI-KREKAQARRGDDVEP 324
+ + A ++ K E+A+ +G + P
Sbjct: 341 YADMSWFKGKQASQLEKLEQARKNKGLILTP 371
Score = 185 bits (470), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 90/167 (53%), Positives = 109/167 (65%), Gaps = 6/167 (3%)
Query: 436 WKERYYEEKF--NAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPF 493
WK YY K N +PEE + ++ RY EGL WVMHYY+ GV SW WFY YHYAP
Sbjct: 475 WKRDYYRTKLEINFDSPEEMGK----LIRRYAEGLQWVMHYYFSGVASWGWFYDYHYAPR 530
Query: 494 ASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTD 553
SDLK LD+ + FELG PFKPF QL+GV PSAS +P+ Y LM DP SPIS FYP
Sbjct: 531 ISDLKGLDEMSFDFELGKPFKPFEQLMGVLPSASKELVPQAYWPLMIDPVSPISHFYPLT 590
Query: 554 FEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSI 600
FE+D+NGK+ W+ I K+PFI+E LL + E+ L+ EE RNS
Sbjct: 591 FELDLNGKKQDWEAIVKIPFINEKELLAAMSSRENLLSSEECGRNSF 637
>gi|195398773|ref|XP_002057995.1| GJ15840 [Drosophila virilis]
gi|194150419|gb|EDW66103.1| GJ15840 [Drosophila virilis]
Length = 1656
Score = 228 bits (582), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 127/329 (38%), Positives = 184/329 (55%), Gaps = 55/329 (16%)
Query: 1 MNQQRSRRFRASKDA--ADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMA 58
MNQQRSRRFR++++A ++ A + R+E ER FDSN ITPGTEFMA
Sbjct: 94 MNQQRSRRFRSAREAEMLEAKALQRGERREHER-------------FDSNCITPGTEFMA 140
Query: 59 VLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHC 118
L + L+ ++ +++ DP W+K ++ILS PGEGEHKIM Y+R + P +DPNTRHC
Sbjct: 141 RLQLGLRCFLRTKISTDPLWQKCRIILSGQETPGEGEHKIMDYIRYMKAQPNFDPNTRHC 200
Query: 119 LYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEF 178
LYGLDADLI+L L THE+HF +LRE V +F
Sbjct: 201 LYGLDADLIILGLCTHELHFVVLREEV-------------------------------KF 229
Query: 179 DEKGDEVVVPKKPYQFLHIWTLREYLDYEF-RIPNPPFEIDLECIVDDFIFMCFFVGNDF 237
V + + LH+ LREYL+ EF ++ P ++D+ ++DD++ M F VGNDF
Sbjct: 230 GRNVKRTSVEETRFFLLHLGLLREYLELEFHQLSTPEQKLDVAQLIDDWVLMGFMVGNDF 289
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y + +R LGG + + K +L R+E F+ A+ E ++F++
Sbjct: 290 IPHLPCLHISSNALPLLYKTYIRIYRQLGGNINEHGKLNLERLEQFMHALSEVELQLFEE 349
Query: 298 RARLHQRHAERIKREKAQARRGD-DVEPL 325
H++ +K A+ D DV L
Sbjct: 350 -------HSDDLKYMNAKTEAFDVDVAEL 371
Score = 169 bits (427), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 77/168 (45%), Positives = 102/168 (60%), Gaps = 11/168 (6%)
Query: 435 GWKERYYEEKFNAKTPEEREETRKDVVLR----YTEGLCWVMHYYYEGVCSWQWFYPYHY 490
+K YY KF + E D++ Y + WV+ YYY GV SW W+YPYHY
Sbjct: 415 NYKRNYYRNKF-------KNEMHSDLIAELGYHYVTAMQWVLDYYYRGVQSWDWYYPYHY 467
Query: 491 APFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFY 550
APF SDL ++ I+F+LG PF PF QLL V P+AS LP Y LM +PNSP+++FY
Sbjct: 468 APFISDLTNIKDIRINFKLGKPFLPFQQLLAVLPAASVSLLPAAYHDLMLNPNSPLAEFY 527
Query: 551 PTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
PT+FE D+NGK++ W+ + +PFI+E RLL + E L EE RN
Sbjct: 528 PTEFESDLNGKKHDWEAVVLIPFIEEDRLLRAMSACEPLLNSEERNRN 575
>gi|154331043|ref|XP_001561961.1| putative 5'-3' exonuclease [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134059283|emb|CAM36982.1| putative 5'-3' exonuclease [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|449310628|gb|AGE92541.1| 5'-3' exonuclease [Leishmania braziliensis]
gi|449310652|gb|AGE92553.1| 5'-3' exonuclease [Leishmania braziliensis]
Length = 1513
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 134/323 (41%), Positives = 185/323 (57%), Gaps = 35/323 (10%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RR+RA + A EE L G ++P + D +FDSN ITPGT FM +
Sbjct: 94 MNQQRQRRYRAGYEMM--VAREEALAM-----GEEVPEEKD--MFDSNCITPGTPFMVRV 144
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S QY+I ++L+ DP W++ ++I S + PGEGEHKI+ ++R ++ P YDPN HC+Y
Sbjct: 145 STEFQYFITMKLSTDPAWQRCEIIFSGHDCPGEGEHKIVDFIRRRKMQPNYDPNETHCMY 204
Query: 121 GLDADLIMLALATHEVHFSILREVV-FTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADL+MLALATHE HF +LREVV F PG + + + +G K KA
Sbjct: 205 GLDADLVMLALATHEPHFVLLREVVTFGPGSRKE-----RERQEEDEAKGLVKDKAY--- 256
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFR----IPNPPFEIDLECIVDDFIFMCFFVGN 235
K DE V+ LHI R+YL E + +ID E I+DDF+FMCFF+GN
Sbjct: 257 HKADEFVL-------LHISVFRDYLQLEVKDYLAKSKSSTKIDFERIIDDFVFMCFFIGN 309
Query: 236 DFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 295
DFLP +PT+ I +G+I +L+ +Y + YLT + R E ++ VG E F
Sbjct: 310 DFLPTLPTIGINDGSIPVLLRLYVDNLLSKNRYLTHKGEIDWRNAEVWLNEVGKLE---F 366
Query: 296 QKRARLHQRHAERIKREKAQARR 318
+ L +R E + +K +ARR
Sbjct: 367 ET---LRRRQQEEAEYQKNRARR 386
Score = 144 bits (363), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/169 (42%), Positives = 104/169 (61%), Gaps = 9/169 (5%)
Query: 436 WKERYYEEK--FNAKTPEEREETRKDVVLR--YTEGLCWVMHYYYEGVCSWQWFYPYHYA 491
+K+RYY EK F E+ R+ LR Y EGL WVMHYYY+GV SW+WF+P++YA
Sbjct: 406 FKQRYYGEKHGFVGGWDANSEDMRR---LREHYVEGLMWVMHYYYQGVPSWKWFFPHYYA 462
Query: 492 PFASDLKDLDQFN--ISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDF 549
P ASDL +L + ++FE+G PF+P QLL V P S ++P+ Y L+ P+SP++ +
Sbjct: 463 PMASDLVNLPGISARVTFEVGKPFQPHQQLLAVLPPMSYLSMPKAYWSLLRSPSSPLAKY 522
Query: 550 YPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
P +D G R W+GI +PFIDE LL + ++ ++ E+A N
Sbjct: 523 LPEHIVIDREGARAPWEGIVLIPFIDERTLLAAYESVQQNVSPEDAANN 571
>gi|253743695|gb|EET00027.1| 5'-3' exoribonuclease 2 [Giardia intestinalis ATCC 50581]
Length = 900
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 143/359 (39%), Positives = 195/359 (54%), Gaps = 42/359 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEF-------EREGRKLPPKSDSQV---FDSNVI 50
+NQQRSRRF A+ + +ER F ++ G ++ ++S DSN I
Sbjct: 107 LNQQRSRRFMAAYERQIKERVQERRLMSFGDVEPSLKKLGSEMNDATESTAQTNLDSNAI 166
Query: 51 TPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPG 110
TPGT FM+ LS+AL+YY+ R N W + V+ +DA PGEGEHKIMS+VR+QR+ PG
Sbjct: 167 TPGTPFMSRLSVALKYYVANRQANSKLWRHLTVLYADAWSPGEGEHKIMSFVRVQRSQPG 226
Query: 111 YDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGK 170
YDP T HC+YGLDADLIMLAL THE +F ILR+VV T + C CG + + G
Sbjct: 227 YDPCTIHCIYGLDADLIMLALGTHEPNFLILRDVVDTANLKRTCTRCGHLRISSEHNTGT 286
Query: 171 AKRKAGEFDEKGD-----------EVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDL 219
+++G V + P+QFLH+ LREYL EF + F
Sbjct: 287 VDPFTTRHEDQGGMDCPFYPGSSLRPVAFRSPFQFLHVSRLREYLQREFDATDVIF---- 342
Query: 220 ECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALG-GYLTDGSKPSLR 278
E +DDF+F+ F VGNDFLPH+ L+IRE A+ ++ YK+ R+ G+LT GS ++
Sbjct: 343 ERAIDDFVFLTFLVGNDFLPHIQCLDIREDAVIRMIYFYKQLKRSRKIGFLTTGSDVNIG 402
Query: 279 RVEHFIQAVGSYEDRIFQKRA--RLHQRHA--------------ERIKREKAQARRGDD 321
++ + E RIF+ RA + + RHA ER RE Q R DD
Sbjct: 403 DFHVLLRELAEQEARIFKARASGKANARHAQASETPDSKDETPGERAVREYFQFFRKDD 461
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 103/202 (50%), Gaps = 17/202 (8%)
Query: 428 KVKLGEPGWKERYY----------EEKFNA-KTPEEREETRKDVVLRYTEGLCWVMHYYY 476
K +L +PG+ +RYY E+ + + K E ++ + + Y +GL WV YY+
Sbjct: 493 KYELEKPGYAQRYYLGIGLMDDFPEKNYESDKFKAELKQRIQTMCYHYIDGLIWVFRYYF 552
Query: 477 E-GVCSWQWFYPYHYAPFASDLKDLDQFNISFELGH-----PFKPFNQLLGVFPSASSHA 530
V W W+YPYH++P DL Q H PF P+ QLL V P AS+
Sbjct: 553 LPKVEDWGWYYPYHHSPLLVDLAAASQTYTRTWKQHTVSNRPFNPYEQLLAVMPPASAAL 612
Query: 531 LPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTL 590
LP R LMTDP S ++ FYP+ + D++ K W+G+ LPFI+ + L+ +K L
Sbjct: 613 LPPVMRHLMTDPASDLNKFYPSLIKCDLSEKTALWKGVLLLPFINSSELISAAQKSYGQL 672
Query: 591 TEEEARRNSIMADMLFVLLSHP 612
T E +RN + ++ + HP
Sbjct: 673 TPLEQQRNRLSDPVILIHKDHP 694
>gi|406861681|gb|EKD14734.1| exonuclease II Exo2 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 1395
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 124/300 (41%), Positives = 175/300 (58%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA E R + +EG+++P + + FDSN ITPGT FM L
Sbjct: 94 MNQQRARRFRTALDA-------ENARDKAIKEGKEMPKE---EAFDSNAITPGTAFMHKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+I+ +++ D W+ ++V+LS VPGEGEHKIM Y+RL + P YD N RHCLY
Sbjct: 144 TQQLKYFINKKVSEDTDWQGVEVVLSGHEVPGEGEHKIMEYIRLAKAQPDYDANIRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+Q K K+ E +
Sbjct: 204 GLDADLIMLGLLSHDPHFCLLREEV-TFGRQSKA-------------------KSKELEH 243
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGND 236
+ + +H+ +REYL+ EF+ P DLE I+DDFI M FFVGND
Sbjct: 244 QN---------FYLMHLCIVREYLELEFQELKEPGVLSASFDLERIIDDFILMAFFVGND 294
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP++P L I EGA+ L+ VYK GG++ +G +++R+ ++ + E R F+
Sbjct: 295 FLPNLPNLHINEGALALMFKVYKTVLPKAGGFINEGGVINMQRLAMLLEELSHVEYRFFE 354
Score = 173 bits (438), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 80/172 (46%), Positives = 106/172 (61%), Gaps = 2/172 (1%)
Query: 436 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 495
WK+ YY+ KF E E T+ + Y +GL WV+HYYY GV SW W+Y YHY+P S
Sbjct: 506 WKDTYYKGKFEWDRNNETELTK--LCENYVQGLQWVLHYYYRGVVSWPWYYQYHYSPMIS 563
Query: 496 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 555
D+ +++F+LG PF P+ QL+GV P S +P Y LMT+PNSPI DFYP DFE
Sbjct: 564 DVIKGLNADVNFKLGQPFHPYEQLMGVLPDRSKTIVPSVYHDLMTNPNSPIIDFYPRDFE 623
Query: 556 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
+DMNGK+ W+ + K+PFIDE RLL + L+E+E RN + F
Sbjct: 624 LDMNGKKMEWEAVVKIPFIDEKRLLAAMAPKYLLLSEDEKFRNEFGVTVKFT 675
>gi|308160579|gb|EFO63060.1| 5'-3' exoribonuclease 2 [Giardia lamblia P15]
Length = 900
Score = 226 bits (577), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 137/335 (40%), Positives = 192/335 (57%), Gaps = 36/335 (10%)
Query: 1 MNQQRSRRFRASKDAADSAAEEER-----------LRQEFEREGRKLPPKSDSQVFDSNV 49
+NQQRSRRF A+ + +ER L++ E + + +++ + DSN
Sbjct: 107 LNQQRSRRFMAAYERQIKQRAQERRHMNLGDTEPSLKKLGFEENKAMDTFTENAL-DSNA 165
Query: 50 ITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLP 109
ITPGT FM+ LS+AL+YY+ R N W + V+ +DA PGEGEHKIMS+VR+QR+ P
Sbjct: 166 ITPGTPFMSRLSVALKYYVANRQANSKLWRHLTVLYADAWSPGEGEHKIMSFVRIQRSQP 225
Query: 110 GYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEG 169
GYDP T HC+YGLDADLIMLAL THE +F ILR+VV T + C C GHL + E
Sbjct: 226 GYDPCTVHCIYGLDADLIMLALGTHEPNFLILRDVVDTDNLKRTCTRC---GHLRVSSEY 282
Query: 170 KAKR----KAGEFDEKGDEV----------VVPKKPYQFLHIWTLREYLDYEFRIPNPPF 215
+ D+ G + V + P+QFLH+ LREYL EF + F
Sbjct: 283 RTGTVDPFTTRHEDQGGIDCPFYPGSSLRPVAFRSPFQFLHVSRLREYLQREFDAADVVF 342
Query: 216 EIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALG-GYLTDGSK 274
E +DDF+F+ F VGNDFLPH+ L+IRE A+ ++ YK+ R+ G+LT GS
Sbjct: 343 ERS----IDDFVFLTFLVGNDFLPHIQCLDIREDAVIRMIYFYKQLKRSKKIGFLTTGSD 398
Query: 275 PSLRRVEHFIQAVGSYEDRIFQKRA--RLHQRHAE 307
++ ++ + E RIF+ RA +L+ RH++
Sbjct: 399 VNMNDFHILLKELAEQESRIFKARASGKLNTRHSQ 433
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 101/202 (50%), Gaps = 17/202 (8%)
Query: 428 KVKLGEPGWKERYY-----EEKFNAKTPEE---REETRKDV---VLRYTEGLCWVMHYYY 476
K +L +PG+ +RYY + F E + E RK + Y +GL WV YY+
Sbjct: 493 KYELEKPGYAQRYYLGIGLMDDFQETDQESDIFKTELRKRIQTMCYHYIDGLIWVFRYYF 552
Query: 477 E-GVCSWQWFYPYHYAPFASDLKDLDQFNISFELGH-----PFKPFNQLLGVFPSASSHA 530
V W W+YPYH++P DL Q H PF P+ QLL V P AS+
Sbjct: 553 LPKVEDWGWYYPYHHSPLLVDLASASQTYTRTWKQHTMSNRPFNPYEQLLAVMPPASATL 612
Query: 531 LPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTL 590
LP R LMTDP S ++ FYP+ + D++ K W+G+ LPFI+ + L+ +K L
Sbjct: 613 LPPVMRCLMTDPASILNKFYPSLIKCDLSEKTALWKGVLLLPFINSSELVSAAQKSYGQL 672
Query: 591 TEEEARRNSIMADMLFVLLSHP 612
T E +RN + ++ + HP
Sbjct: 673 TPLEQQRNRLSDPVVLIHKDHP 694
>gi|261329673|emb|CBH12655.1| 5'-3' exonuclease XRNA, putative [Trypanosoma brucei gambiense
DAL972]
Length = 1418
Score = 226 bits (577), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 134/325 (41%), Positives = 184/325 (56%), Gaps = 34/325 (10%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RR+R S E R+E G +LP ++D VFDSN ITPGT+FM +
Sbjct: 94 MNQQRQRRYR-------SGYEMMVAREEALSRGEELPEEAD--VFDSNCITPGTDFMVRI 144
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S QY+I ++++ DP W+ VI S + PGEGEHKI+ ++R ++ P Y PN HC+Y
Sbjct: 145 SEHFQYFIMMKMSTDPAWQNCSVIYSGHDHPGEGEHKIVEFIRRRKMQPDYGPNETHCMY 204
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADL+MLALATHE HF +LREVV F GQ E + R+ E DE
Sbjct: 205 GLDADLVMLALATHEPHFVLLREVV--------TFGFGQ--------ESRRAREQREQDE 248
Query: 181 KGDEVVVPK---KPYQFL--HIWTLREYLDYEFRI---PNPPFEIDLECIVDDFIFMCFF 232
D +V K KP +F+ H+ LR+YLD E R P DLE +VDDF+ MCFF
Sbjct: 249 S-DGIVADKSYQKPDEFVLFHVNVLRDYLDLEVRERLGDKLPTNYDLERVVDDFVLMCFF 307
Query: 233 VGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYED 292
+GNDFLP +PTL I +G++ ++ +Y + YLTD + R VE ++Q + E
Sbjct: 308 IGNDFLPSIPTLGIHDGSLVQMLDLYAQRVLLAHTYLTDMGRIDWRAVEGWLQGLADLEF 367
Query: 293 RIFQKRARLHQRHAERIKREKAQAR 317
+ R Q + R+ ++ + R
Sbjct: 368 TTIKAREAQEQEYQRRMAQQCGEHR 392
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 99/174 (56%), Gaps = 3/174 (1%)
Query: 436 WKERYYEEKFN-AKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA 494
+K+RYY +K A + + E + L Y EG+ WV+ YYY+G SW+W++P+HYAP A
Sbjct: 407 YKDRYYRDKHQFAMGWDPQGEDMAKLRLHYIEGIMWVIGYYYQGPPSWKWYFPHHYAPMA 466
Query: 495 SDLKDLDQFN--ISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPT 552
SDL +L + F+ G PF P QLL V P S ++P Y L+ NSP++ ++P
Sbjct: 467 SDLVNLPAVAACVKFDPGKPFLPHQQLLAVLPPMSYRSMPRAYWPLLRSKNSPLARYFPE 526
Query: 553 DFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 606
++D G R W+G+ +PFI+E LL + ++ +T EE N + L+
Sbjct: 527 KLQIDREGTRAPWEGVVLIPFIEERTLLAAYETVQDRVTPEERENNRLGLPTLY 580
>gi|339896661|ref|XP_001463108.2| putative 5'-3' exonuclease [Leishmania infantum JPCM5]
gi|321398929|emb|CAM65457.2| putative 5'-3' exonuclease [Leishmania infantum JPCM5]
Length = 1499
Score = 226 bits (577), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 138/342 (40%), Positives = 192/342 (56%), Gaps = 41/342 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RR+RA + A EE L G ++P + D VFDSN ITPGT FM +
Sbjct: 94 MNQQRQRRYRAGYEMM--IAREEALAM-----GEEVPEEKD--VFDSNCITPGTPFMVRV 144
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S QY+I ++L+ DP W+ ++I S + PGEGEHKI+ ++R ++ P YDPN HC+Y
Sbjct: 145 SKEFQYFITMKLSTDPAWQGCQIIFSGHDCPGEGEHKIVDFIRRRKMQPNYDPNETHCMY 204
Query: 121 GLDADLIMLALATHEVHFSILREVV-FTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADL+MLALATHE HF +LREVV F PG + + + +G K KA
Sbjct: 205 GLDADLVMLALATHEPHFVLLREVVTFGPGSRKE-----RERQEEDEAKGLVKDKAY--- 256
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFR----IPNPPFEIDLECIVDDFIFMCFFVGN 235
K DE V+ LHI R+YL E + ID E ++DDF+FMCFF+GN
Sbjct: 257 HKADEFVL-------LHINVFRDYLQLEVKGYLAKAKSSVSIDFERVIDDFVFMCFFIGN 309
Query: 236 DFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 295
DFLP +PT+ I +G+I L+ +Y + YLT + R E ++ VG E F
Sbjct: 310 DFLPTLPTIGINDGSIPALLRIYVDNMLSKSKYLTHKGEIDWRNAEVWLNEVGKLE---F 366
Query: 296 QKRARLHQRHAERIKREKAQARRGDDVEPLAQPD--SLVPVS 335
+ L +R E + +K +ARR +P + D S++P++
Sbjct: 367 ET---LRRRQQEEAEFQKNRARR----DPTHEVDTASVIPIT 401
Score = 143 bits (361), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/166 (42%), Positives = 101/166 (60%), Gaps = 3/166 (1%)
Query: 436 WKERYYEEKFN-AKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA 494
+K+RYY EK A + E + + Y EGL WVMHYYY+GV SW+WF+P++YAP A
Sbjct: 406 FKQRYYGEKHGFAGGWDANSEDMQRLREHYVEGLMWVMHYYYQGVPSWKWFFPHYYAPMA 465
Query: 495 SDLKDLDQF--NISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPT 552
SD+ +L +SFELG PF+P QLL V P S ++P+ Y L+ P+SP++ + P
Sbjct: 466 SDMVNLPAIAARVSFELGKPFQPHQQLLAVLPPMSYLSMPKAYWPLLRSPSSPLAKYLPE 525
Query: 553 DFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
+D G R W+GI +PFIDE LL + ++ ++ E+A N
Sbjct: 526 HIVIDREGARAPWEGIVLIPFIDERTLLAAYESVQKNVSPEDAANN 571
>gi|72391638|ref|XP_846113.1| 5'-3' exonuclease XRNA [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62175631|gb|AAX69763.1| 5'-3' exonuclease XRNA, putative [Trypanosoma brucei]
gi|70802649|gb|AAZ12554.1| 5'-3' exonuclease XRNA, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 1418
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 134/325 (41%), Positives = 184/325 (56%), Gaps = 34/325 (10%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RR+R S E R+E G +LP ++D VFDSN ITPGT+FM +
Sbjct: 94 MNQQRQRRYR-------SGYEMMVAREEALSRGEELPEEAD--VFDSNCITPGTDFMVRI 144
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S QY+I ++++ DP W+ VI S + PGEGEHKI+ ++R ++ P Y PN HC+Y
Sbjct: 145 SEHFQYFIMMKMSTDPAWQNCSVIYSGHDHPGEGEHKIVEFIRRRKMQPDYGPNETHCMY 204
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADL+MLALATHE HF +LREVV F GQ E + R+ E DE
Sbjct: 205 GLDADLVMLALATHEPHFVLLREVV--------TFGFGQ--------ESRRAREQREQDE 248
Query: 181 KGDEVVVPK---KPYQFL--HIWTLREYLDYEFRI---PNPPFEIDLECIVDDFIFMCFF 232
D +V K KP +F+ H+ LR+YLD E R P DLE +VDDF+ MCFF
Sbjct: 249 S-DGIVADKSYQKPDEFVLFHVNVLRDYLDLEVRERLGDKLPTNYDLERVVDDFVLMCFF 307
Query: 233 VGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYED 292
+GNDFLP +PTL I +G++ ++ +Y + YLTD + R VE ++Q + E
Sbjct: 308 IGNDFLPSIPTLGIHDGSLVQMLDLYAQRVLLAHTYLTDMGRIDWRAVEGWLQGLADLEF 367
Query: 293 RIFQKRARLHQRHAERIKREKAQAR 317
+ R Q + R+ ++ + R
Sbjct: 368 TTIKAREAQEQEYQRRMAQQCGEHR 392
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 100/174 (57%), Gaps = 3/174 (1%)
Query: 436 WKERYYEEKFN-AKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA 494
+K+RYY +K A + + E + L Y EG+ WV+ YYY+G SW+W++P+HYAP A
Sbjct: 407 YKDRYYRDKHQFAMGWDPQGEDMAKLRLHYIEGIMWVIGYYYQGPPSWKWYFPHHYAPMA 466
Query: 495 SDLKDLDQFN--ISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPT 552
SDL +L + F+ G PF P QLL V P S ++P Y L+ NSP++ ++P
Sbjct: 467 SDLVNLPAVAACVKFDPGKPFLPHQQLLAVLPPMSYRSMPRAYWPLLRSKNSPLARYFPE 526
Query: 553 DFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 606
++D G R W+G+ +PFI+E LL + ++ +T EE + N + L+
Sbjct: 527 KLQIDREGTRAPWEGVVLIPFIEERTLLAAYETVQDRVTPEERKNNRLGLPTLY 580
>gi|124506737|ref|XP_001351966.1| exoribonuclease, putative [Plasmodium falciparum 3D7]
gi|23504994|emb|CAD51777.1| exoribonuclease, putative [Plasmodium falciparum 3D7]
Length = 1311
Score = 226 bits (576), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 129/344 (37%), Positives = 194/344 (56%), Gaps = 26/344 (7%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRF++ + L++ F E + +P ++ +DSNVITPGTEFM L
Sbjct: 131 MNQQRSRRFKSISCSEIEKRAYLELKERFIAENKMVP--EETTYWDSNVITPGTEFMHEL 188
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
SIAL+Y+I ++ ND W+ + VI SD+NV GEGEHKI ++++ QR PGYDPNTRH ++
Sbjct: 189 SIALKYFIEHKITNDEKWKNVVVIFSDSNVCGEGEHKIFNFIKSQRAQPGYDPNTRHVIH 248
Query: 121 GLDADLIMLALATHEVHFSILREVV-FTPGQQDKCFLCGQP--GHLAAN-----CEGKAK 172
G+DADLIML+LA+HE +F ILRE++ P ++K + G L + C AK
Sbjct: 249 GMDADLIMLSLASHEPYFYILREIIDLDPKSEEKEKTKKKEYVGMLKSYDDLHFCTRYAK 308
Query: 173 RKAGEFDEKGD----EVVVPKKP---------YQFLHIWTLREYLDYEFRIPNPPFEIDL 219
++ F++ D V + K Q L + LREYL + ++
Sbjct: 309 KEKKLFNKYNDPNYANVTISKNASLNYEYWNELQILDLTILREYLLKDLFFDTS---FNM 365
Query: 220 ECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRR 279
E +DDFIF+CFF GNDFLPH+P++ I G+I+ L+ +Y+K LG YL + +L+
Sbjct: 366 ERCLDDFIFICFFCGNDFLPHLPSISIAGGSIDQLILLYQKVLPTLGDYLINEGSINLKS 425
Query: 280 VEHFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARRGDDVE 323
+I + E F + ++ +R ++K +R V+
Sbjct: 426 FTKYISFIAEVERETFVSQYDFKKKREKRELQQKDSLKRAKCVD 469
Score = 178 bits (452), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/269 (36%), Positives = 162/269 (60%), Gaps = 11/269 (4%)
Query: 377 SSGATIGAAIVEAENSFETDPQ-ENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLG--- 432
S+ T+ V ++S++ + + ++ EF LKE ++ ++ +NP+ED V+LG
Sbjct: 643 SNNDTLSNTEVLPKDSYDENKKLDDINEFNLLLKEAIKKANEC---ENPKED-VELGGDE 698
Query: 433 EPGW-KERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYA 491
P + +YY+ KF+ + E+ KDVV +Y EGL WV+ YY++ W W+YPY+YA
Sbjct: 699 NPDIIRMKYYKSKFHLDDNDAIEDFIKDVVYKYVEGLAWVLAYYFQSCPMWHWYYPYYYA 758
Query: 492 PFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYP 551
P +SDL +D +FE P PF QLL V P+ SSH LP+ Y++LM +SPI DFYP
Sbjct: 759 PLSSDLI-VDNITFNFEKDEPLLPFEQLLCVLPANSSHCLPKMYKQLMLHKDSPIIDFYP 817
Query: 552 TDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSH 611
F+ + NGK+Y +Q I LPF+D+ R++ + + TL +E +RN + ++V +H
Sbjct: 818 HTFKEEQNGKKYKYQWIILLPFVDKERIIKHARPLHDTLNNDEKKRNRRGLNKIYVSSNH 877
Query: 612 PLSASIY-TLDEHCKQLKIKERVEVKERL 639
PLS +I ++ + K++K KE ++ ++ L
Sbjct: 878 PLSKTITKSIKNYLKEVKEKESLKNEDAL 906
>gi|398010273|ref|XP_003858334.1| 5'-3' exonuclease, putative [Leishmania donovani]
gi|322496541|emb|CBZ31610.1| 5'-3' exonuclease, putative [Leishmania donovani]
Length = 1499
Score = 226 bits (576), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 138/342 (40%), Positives = 192/342 (56%), Gaps = 41/342 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RR+RA + A EE L G ++P + D VFDSN ITPGT FM +
Sbjct: 94 MNQQRQRRYRAGYEMM--IAREEALAM-----GEEVPEEKD--VFDSNCITPGTPFMVRV 144
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S QY+I ++L+ DP W+ ++I S + PGEGEHKI+ ++R ++ P YDPN HC+Y
Sbjct: 145 SKEFQYFITMKLSTDPAWQGCQIIFSGHDCPGEGEHKIVDFIRRRKMQPNYDPNETHCMY 204
Query: 121 GLDADLIMLALATHEVHFSILREVV-FTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADL+MLALATHE HF +LREVV F PG + + + +G K KA
Sbjct: 205 GLDADLVMLALATHEPHFVLLREVVTFGPGSRKE-----RERQEEDEAKGLVKDKAY--- 256
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFR----IPNPPFEIDLECIVDDFIFMCFFVGN 235
K DE V+ LHI R+YL E + ID E ++DDF+FMCFF+GN
Sbjct: 257 HKADEFVL-------LHINVFRDYLQLEVKGYLAKAKSSVSIDFERVIDDFVFMCFFIGN 309
Query: 236 DFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 295
DFLP +PT+ I +G+I L+ +Y + YLT + R E ++ VG E F
Sbjct: 310 DFLPTLPTIGINDGSIPALLHIYVDNMLSKSKYLTHKGEIDWRNAEVWLNEVGKLE---F 366
Query: 296 QKRARLHQRHAERIKREKAQARRGDDVEPLAQPD--SLVPVS 335
+ L +R E + +K +ARR +P + D S++P++
Sbjct: 367 ET---LRRRQQEEAEFQKNRARR----DPTHEVDTASVIPIT 401
Score = 143 bits (361), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/166 (42%), Positives = 101/166 (60%), Gaps = 3/166 (1%)
Query: 436 WKERYYEEKFN-AKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA 494
+K+RYY EK A + E + + Y EGL WVMHYYY+GV SW+WF+P++YAP A
Sbjct: 406 FKQRYYGEKHGFAGGWDANSEDMQRLREHYVEGLMWVMHYYYQGVPSWKWFFPHYYAPMA 465
Query: 495 SDLKDLDQF--NISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPT 552
SD+ +L +SFELG PF+P QLL V P S ++P+ Y L+ P+SP++ + P
Sbjct: 466 SDMVNLPAIAARVSFELGKPFQPHQQLLAVLPPMSYLSMPKAYWPLLRSPSSPLAKYLPE 525
Query: 553 DFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
+D G R W+GI +PFIDE LL + ++ ++ E+A N
Sbjct: 526 HIVIDREGARAPWEGIVLIPFIDERTLLAAYESVQKNVSPEDAANN 571
>gi|157864164|ref|XP_001680795.1| putative 5'-3' exonuclease [Leishmania major strain Friedlin]
gi|68124087|emb|CAJ02069.1| putative 5'-3' exonuclease [Leishmania major strain Friedlin]
Length = 1490
Score = 226 bits (575), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 137/342 (40%), Positives = 192/342 (56%), Gaps = 41/342 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RR+RA + A EE L G ++P + D VFDSN ITPGT FM +
Sbjct: 94 MNQQRQRRYRAGYEMM--IAREEALAM-----GEEVPEEKD--VFDSNCITPGTPFMVRV 144
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S QY+I ++L+ DP W+ ++I S + PGEGEHKI+ ++R ++ P YDPN HC+Y
Sbjct: 145 SKEFQYFITMKLSTDPAWQGCQIIFSGHDCPGEGEHKIVDFIRRRKMQPNYDPNETHCMY 204
Query: 121 GLDADLIMLALATHEVHFSILREVV-FTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADL+MLALATHE HF +LREVV F PG + + + +G K KA
Sbjct: 205 GLDADLVMLALATHEPHFVLLREVVAFGPGSRKE-----RERQEEDEAKGLVKDKAY--- 256
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRI----PNPPFEIDLECIVDDFIFMCFFVGN 235
K DE V+ LHI R+YL E + +D E ++DDF+FMCFF+GN
Sbjct: 257 HKADEFVL-------LHINVFRDYLQLEVKSYLAKAKSSVSVDFERVIDDFVFMCFFIGN 309
Query: 236 DFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 295
DFLP +PT+ I +G+I L+ +Y + YLT + R E ++ VG E F
Sbjct: 310 DFLPTLPTIGINDGSIPALLRIYVDNMLSKNKYLTHKGEIDWRSAEVWLNEVGKLE---F 366
Query: 296 QKRARLHQRHAERIKREKAQARRGDDVEPLAQPD--SLVPVS 335
+ L +R E + +K +ARR +P + D S++P++
Sbjct: 367 ET---LRRRQQEEAEFQKNRARR----DPTHEVDTTSVIPIT 401
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 104/169 (61%), Gaps = 9/169 (5%)
Query: 436 WKERYYEEK--FNAKTPEEREETRKDVVLR--YTEGLCWVMHYYYEGVCSWQWFYPYHYA 491
+K+RYY EK F E+ R+ LR Y EGL WVMHYYY+GV SW+WF+P++YA
Sbjct: 406 FKQRYYGEKHGFAGGWDASSEDMRR---LREHYVEGLMWVMHYYYQGVPSWKWFFPHYYA 462
Query: 492 PFASDLKDLDQF--NISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDF 549
P ASD+ +L N+SFELG PF+P QLL V P S ++P+ Y L+ P+SP++ +
Sbjct: 463 PMASDMVNLPAIAANVSFELGKPFQPHQQLLAVLPPMSYLSMPKAYWPLLRSPSSPLAKY 522
Query: 550 YPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
P +D G R W+GI +PFIDE LL + ++ ++ E+A N
Sbjct: 523 LPEHIVIDREGARAPWEGIVLIPFIDERTLLAAYESVQKNVSPEDAANN 571
>gi|147862842|emb|CAN82968.1| hypothetical protein VITISV_021857 [Vitis vinifera]
Length = 1122
Score = 226 bits (575), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 114/173 (65%), Positives = 132/173 (76%), Gaps = 2/173 (1%)
Query: 303 QRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDN 362
+R AERIKREKAQARRGDD +P +P+ LVPVSR+HGSRLAS P+PSPYQQ E +
Sbjct: 927 KRQAERIKREKAQARRGDDADPQVKPEFLVPVSRYHGSRLASAPTPSPYQQHEIKSKQSG 986
Query: 363 GKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSD 422
G+ GR KV R SSGAT+GAAIVEAEN ET+ +NK+E KAKLKELLR+KSD FNS
Sbjct: 987 TSGSQGR--KVARFSSGATVGAAIVEAENDLETELHDNKDELKAKLKELLREKSDLFNSK 1044
Query: 423 NPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYY 475
NPEEDKVKLGE GWKERYYEEKF+ KTPEE+E R DV L C+++ Y
Sbjct: 1045 NPEEDKVKLGEAGWKERYYEEKFSTKTPEEQEAIRNDVFLSLELFDCYLVWLY 1097
>gi|347831559|emb|CCD47256.1| similar to 5'-3' exoribonuclease 1 [Botryotinia fuckeliana]
Length = 1389
Score = 226 bits (575), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 126/299 (42%), Positives = 177/299 (59%), Gaps = 47/299 (15%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + D E R++ +EG+++P K D+ FDSN ITPGTEFM L
Sbjct: 94 MNQQRARRFRTALDV-------ENAREKAIKEGKEMP-KEDA--FDSNSITPGTEFMQKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
++ L+Y+I +++ D W+ +++LS VPGEGEHKIM Y+RL++ P YDPN RHCLY
Sbjct: 144 TLQLKYFIAKKISEDVDWQGTEIVLSGHEVPGEGEHKIMEYIRLKKAQPDYDPNRRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+Q K K+ E +
Sbjct: 204 GLDADLIMLGLLSHDPHFCLLREEV-TFGRQSKA-------------------KSKELEH 243
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFR------IPNPPFEIDLECIVDDFIFMCFFVG 234
+ + +H+ +REYL+ EF+ + PF DLE ++DDFI M FFVG
Sbjct: 244 QN---------FYLMHLCIVREYLELEFQELKEDGVLGFPF--DLERVIDDFILMAFFVG 292
Query: 235 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDR 293
NDFLP++P L I EGA+ L+ VYK GGY+ +G ++ R+ ++ + E R
Sbjct: 293 NDFLPNLPNLHINEGALALMFKVYKTILPKGGGYINEGGVINMSRLAILLEELSHVEYR 351
Score = 177 bits (448), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 80/172 (46%), Positives = 108/172 (62%), Gaps = 2/172 (1%)
Query: 436 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 495
WK++YYE KF E E T+ + Y +GL WV++YYY GV SW W+Y YHY+P S
Sbjct: 506 WKDKYYEGKFEWDRKNEIELTK--LCENYVQGLQWVLYYYYRGVVSWPWYYQYHYSPMIS 563
Query: 496 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 555
D+ + +++F+LG PF PF QL+GV P S +P Y LMT+P SPI DFYP DFE
Sbjct: 564 DVIKGLKADVNFKLGQPFHPFEQLMGVLPDRSKKIVPTVYHDLMTNPASPIIDFYPRDFE 623
Query: 556 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
+DMNGK+ W+ + K+PFIDE RLLD + + L++ E RN + F
Sbjct: 624 LDMNGKKMEWEAVVKIPFIDEKRLLDAMATKNNLLSDAEKFRNEFGVSLKFT 675
>gi|405973506|gb|EKC38214.1| 5'-3' exoribonuclease 1 [Crassostrea gigas]
Length = 1857
Score = 225 bits (573), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 127/322 (39%), Positives = 175/322 (54%), Gaps = 43/322 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR SA E E L ++ G LP + + FDSN ITPGTEFM L
Sbjct: 94 MNQQRGRRFR-------SAREAEALERKARESGETLPTE---KRFDSNCITPGTEFMVKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y++ ++++DP W + V LS PGEGEHK+M ++R Q++ P YD NTRHCLY
Sbjct: 144 HEQLKYFVTSKISSDPLWHGVDVYLSGHETPGEGEHKVMDFIRCQKSKPDYDANTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADL+ML LATHE HFS+LRE V G++D+ KR A
Sbjct: 204 GLDADLMMLGLATHEPHFSLLREEVRFGGKKDR-----------------NKRPA----- 241
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNP--PFEIDLECIVDDFIFMCFFVGNDFL 238
+ + LH+ REYLD+EF PF LE I+DD+I M F VGNDF+
Sbjct: 242 -----TPEETTFHLLHLSLFREYLDFEFSFLKDKLPFGYSLENIIDDWILMGFLVGNDFI 296
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYE----DRI 294
PH+P L I+ A+ LL Y GGY+ +G +L R + +++ + ++ +
Sbjct: 297 PHLPHLHIQHDALPLLWKTYMTILPECGGYMNEGGHLNLERFDRYMKELAKFDLDKFSEV 356
Query: 295 FQKRARLHQRHAERIKREKAQA 316
F + AER ++E+ +
Sbjct: 357 FTDLKWFEGKTAERSEKEQMEG 378
Score = 175 bits (444), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 80/184 (43%), Positives = 111/184 (60%), Gaps = 2/184 (1%)
Query: 437 KERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASD 496
K YY K + ++ + +D Y + W++ YY+EGV SW WFYP+HYAPF SD
Sbjct: 441 KRNYYMTKLEYEDVDK--QVLRDQCEEYVRAIQWILLYYFEGVPSWSWFYPHHYAPFISD 498
Query: 497 LKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEV 556
+ D I FE+G PF PF QL+ V P+AS LPE Y+KLMT SP+ DFYP DF+
Sbjct: 499 VTDFKDMEIKFEMGSPFLPFQQLMAVLPAASKELLPEPYQKLMTQDISPVIDFYPVDFQT 558
Query: 557 DMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSAS 616
D+NGK+ W+ + +PFIDEARLL+ +K +E+ L+ E +RN+ +L+ L
Sbjct: 559 DLNGKQQEWEAVVLIPFIDEARLLEAMKSVENQLSPSEKKRNAHGPCLLYDYTPDTLEPC 618
Query: 617 IYTL 620
TL
Sbjct: 619 TSTL 622
>gi|346325316|gb|EGX94913.1| exonuclease Kem1, putative [Cordyceps militaris CM01]
Length = 1394
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 128/319 (40%), Positives = 183/319 (57%), Gaps = 43/319 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR +A E E R++ +EG ++P + + FDSN ITPGT FMA L
Sbjct: 95 MNQQRARRFR-------TALEVEMAREKAIKEGVEMPKE---EPFDSNCITPGTAFMAKL 144
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S LQY+++ +++ D W+ +++LS VPGEGEHKIM Y+R ++ PGY+PN RHCLY
Sbjct: 145 SRQLQYFVNKKVSEDTDWQGCEIVLSGHEVPGEGEHKIMEYIRNAKSQPGYNPNVRHCLY 204
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HFS+LRE V T G+ +K K+ E +
Sbjct: 205 GLDADLIMLGLLSHDPHFSLLREEV-TFGR-------------------ASKNKSKELEH 244
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEF----RIPNPPFEIDLECIVDDFIFMCFFVGND 236
+ + LH+ +REYL+ EF + + E DLE ++DDFI M FFVGND
Sbjct: 245 QN---------FFLLHLCMVREYLEMEFQELKQTQDSGLEFDLERVIDDFILMAFFVGND 295
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP++P L I EGA+ + +YK+ GGYL + +++R I +G E + F+
Sbjct: 296 FLPNLPGLHINEGALADMFEIYKRILPEEGGYLHENGVLNIKRALRMIAELGKVEIKQFE 355
Query: 297 KRARLHQRHAERIKREKAQ 315
+ A + +K Q
Sbjct: 356 HDVSDEKWFASKQMEKKLQ 374
Score = 173 bits (439), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 101/173 (58%)
Query: 435 GWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA 494
GWK +YY +KF + + + Y EGL WV+ YYY G+ SW WFY YHYAP
Sbjct: 512 GWKTKYYLQKFPEWESTAYADEQTALCENYVEGLQWVLFYYYRGIASWPWFYKYHYAPLI 571
Query: 495 SDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDF 554
SD+ + FE G PFKP+ QL+GV P S +P Y LMT P SPI DFYP DF
Sbjct: 572 SDVAKGANAKLLFEKGQPFKPYEQLMGVLPDRSKKIVPTAYHDLMTSPASPIIDFYPRDF 631
Query: 555 EVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
E+DMNGK+ W+ + K+PFIDE RLL ++ L++EE RN + F
Sbjct: 632 ELDMNGKKMDWEAVVKIPFIDEKRLLAAMETKNVLLSDEEKARNGFGVPLQFT 684
>gi|401415084|ref|XP_003872038.1| putative 5'-3' exonuclease [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322488260|emb|CBZ23505.1| putative 5'-3' exonuclease [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 1527
Score = 224 bits (572), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 132/323 (40%), Positives = 182/323 (56%), Gaps = 35/323 (10%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RR+RA + + RQE G ++P + D VFDSN ITPGT FM +
Sbjct: 94 MNQQRQRRYRAGYEMMIA-------RQEALAMGEEVPEEKD--VFDSNCITPGTPFMVRV 144
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S QY+I ++L+ DP W+ ++I S + PGEGEHKI+ ++R ++ P YDPN HC+Y
Sbjct: 145 SKEFQYFITMKLSTDPAWQGCQIIFSGHDCPGEGEHKIVDFIRRRKMQPNYDPNETHCMY 204
Query: 121 GLDADLIMLALATHEVHFSILREVV-FTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADL+MLALATHE HF +LREVV F PG + + + +G K KA
Sbjct: 205 GLDADLVMLALATHEPHFVLLREVVTFGPGSRKE-----RERQEEDEAKGLVKDKAY--- 256
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFR----IPNPPFEIDLECIVDDFIFMCFFVGN 235
K DE V+ LHI R+YL E + +D E ++DDF+FMCFF+GN
Sbjct: 257 HKADEFVL-------LHINVFRDYLQLEVKGYLAKAKSSASMDFERVIDDFVFMCFFIGN 309
Query: 236 DFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 295
DFLP +PT+ I +G+I L+ +Y + YLT + R E ++ VG E F
Sbjct: 310 DFLPTLPTIGINDGSIPALLRIYVDNMLSKNKYLTHKGEIDWRNAEVWLNEVGKLE---F 366
Query: 296 QKRARLHQRHAERIKREKAQARR 318
+ L +R E + +K +ARR
Sbjct: 367 ET---LRRRQQEEAEFQKNRARR 386
Score = 142 bits (359), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 72/169 (42%), Positives = 102/169 (60%), Gaps = 9/169 (5%)
Query: 436 WKERYYEEK--FNAKTPEEREETRKDVVLR--YTEGLCWVMHYYYEGVCSWQWFYPYHYA 491
+K+RYY EK F + R+ LR Y EGL WVMHYYY+GV SW+WF+P++YA
Sbjct: 406 FKQRYYGEKHGFAGGWDANSADMRR---LREHYVEGLMWVMHYYYQGVPSWKWFFPHYYA 462
Query: 492 PFASDLKDLDQF--NISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDF 549
P ASD+ +L +SFELG PF+P QLL V P S ++P+ Y L+ P+SP++ +
Sbjct: 463 PMASDMVNLPAIAARVSFELGKPFQPHQQLLAVLPPMSYLSMPKAYWPLLRSPSSPLAKY 522
Query: 550 YPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
P +D G R W+GI +PFIDE LL + ++ ++ E+A N
Sbjct: 523 LPEHIVIDREGARAPWEGIVLIPFIDERTLLAAYESVQKNVSPEDAANN 571
>gi|212535156|ref|XP_002147734.1| exonuclease Kem1, putative [Talaromyces marneffei ATCC 18224]
gi|210070133|gb|EEA24223.1| exonuclease Kem1, putative [Talaromyces marneffei ATCC 18224]
Length = 1419
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 123/284 (43%), Positives = 172/284 (60%), Gaps = 43/284 (15%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR++ DA A+E+ + Q E PK D+ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRARRFRSALDA--EVAKEKAIAQGIEM------PKEDA--FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+I +++ D W+ ++++LS VPGEGEHKIM Y+R + PGYDPN RHCLY
Sbjct: 144 TKQLKYFISKKISEDVEWQGVEIVLSGHEVPGEGEHKIMEYIRQAKAQPGYDPNVRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ +F +LRE V T G+Q A++K+ E +
Sbjct: 204 GLDADLIMLGLLSHDPYFCLLREEV-TFGRQ-------------------AQKKSKELEH 243
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFR----IPNPPFEIDLECIVDDFIFMCFFVGND 236
+ + LH+ +REYL+ EF+ F D+E I+DDFI M FFVGND
Sbjct: 244 QN---------FYLLHLCIVREYLELEFQELQLTTKSGFVYDMERIIDDFILMAFFVGND 294
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRV 280
FLP++P + I EGA+ L+ YK+ +GGY+ + +L+R+
Sbjct: 295 FLPNLPHMHINEGALALMFTKYKEALPKMGGYINEYGSINLQRL 338
Score = 185 bits (469), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/172 (50%), Positives = 106/172 (61%), Gaps = 2/172 (1%)
Query: 436 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 495
WK +YY EKF +E T+ + Y +GL WV+ YYY GV SW W++ YHYAP S
Sbjct: 516 WKNKYYMEKFGHGLEDEAAMTK--LTENYVQGLQWVLFYYYRGVVSWPWYFQYHYAPMIS 573
Query: 496 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 555
D+K NI F+LG PF+PF QL+GV P S +P Y LMT P SPI DFYP DFE
Sbjct: 574 DVKKGLGANIDFKLGQPFRPFQQLMGVLPDRSKKIVPTAYWDLMTSPESPIIDFYPRDFE 633
Query: 556 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
+DMNGK+ W+ + K+PFIDEARLL + EH LT EE RN + F
Sbjct: 634 LDMNGKKMEWEAVVKIPFIDEARLLPAMATREHLLTPEERARNEFGVTLKFT 685
>gi|407853365|gb|EKG06397.1| 5'-3' exonuclease XRNA, putative [Trypanosoma cruzi]
Length = 1646
Score = 223 bits (569), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 127/321 (39%), Positives = 182/321 (56%), Gaps = 38/321 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RR+R S E RQE +G ++P + D VFDSN ITPGT FM +
Sbjct: 299 MNQQRQRRYR-------SGYELMVARQEAIAQGEEVPDEKD--VFDSNCITPGTNFMVRV 349
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S QY+I +++ DP W+ +V+ S + PGEGEHKI+ ++R ++ PGY PN HC+Y
Sbjct: 350 SEQFQYFITMKIATDPAWQNCQVVYSGHDNPGEGEHKIVDFIRRRKMQPGYSPNETHCMY 409
Query: 121 GLDADLIMLALATHEVHFSILREVV-FTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADL+ML+LATHE HF +LREVV F PGQ E + R+ E D
Sbjct: 410 GLDADLVMLSLATHEPHFLLLREVVTFGPGQ-----------------ESRRAREQREED 452
Query: 180 EKGDEVVVPKKPYQ------FLHIWTLREYLDYEFRI---PNPPFEIDLECIVDDFIFMC 230
E ++ K Y+ H+ LR+YLD + R P DL+ ++DDF+ MC
Sbjct: 453 EANG--IIADKSYRKADEFVLFHVNVLRDYLDLDVRDKLGAKMPACYDLDRVLDDFVLMC 510
Query: 231 FFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSY 290
FF+GNDFLP +PTL I +G++ ++ +Y K G YLT+ + + R VE ++Q +G
Sbjct: 511 FFIGNDFLPTIPTLGIHDGSLLQMLDLYCKCILVEGMYLTNQGQINWRAVELWLQGIGEL 570
Query: 291 EDRIFQKRARLHQRHAERIKR 311
E + R + + + ++ R
Sbjct: 571 ELTTIKARQQQEEEYQRKVAR 591
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 98/176 (55%), Gaps = 7/176 (3%)
Query: 436 WKERYYEEKF---NAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAP 492
+KER+Y EK N P+ +E D+ L Y EGL WVM YYY+G SW+WF+P+HYAP
Sbjct: 612 YKERFYREKHGFDNGWDPQGKEMA--DLRLHYVEGLTWVMGYYYQGPPSWKWFFPHHYAP 669
Query: 493 FASDLKDLDQF--NISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFY 550
ASDL +L + F+ PF P QLL V P S ++P Y LM SP+ F+
Sbjct: 670 MASDLVNLPAIAARVEFDPSKPFLPHQQLLAVLPPMSYRSMPRAYWPLMLSDKSPLKRFF 729
Query: 551 PTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 606
P ++D G R W+GI +PFI+E LL + +++ L E+ N + LF
Sbjct: 730 PEILKIDREGARAPWEGIVLIPFIEERVLLAAYQSVQNKLGPEDEVHNRLGPATLF 785
>gi|298707210|emb|CBJ29957.1| 5'-3' exoribonuclease 1 [Ectocarpus siliculosus]
Length = 488
Score = 223 bits (569), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 137/300 (45%), Positives = 174/300 (58%), Gaps = 38/300 (12%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA KD +E +L E + E D+ VFDSN ITPGTEFMA +
Sbjct: 96 MNQQRSRRFRARKDM-----QEAKLIAESKGE-----VVDDTAVFDSNCITPGTEFMAKI 145
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S L+Y++ ++ DP W+ + V S VPGEGEHKIM+Y+R +R+ PNTRHC+Y
Sbjct: 146 SRHLRYFVQKKITEDPLWKALTVTFSGHEVPGEGEHKIMAYIRDERSAGRLPPNTRHCMY 205
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADLI+L L THE HF++LREVV GQ G A+ K R A
Sbjct: 206 GQDADLILLGLVTHEPHFTLLREVV-NFGQN------AARGKNASKVVVKTTRDA----- 253
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNP---PFEIDLECIVDDFIFMCFFVGNDF 237
+Q LH+ LREY+ EF P E+D E +VDDF+F+ F VGNDF
Sbjct: 254 ----------QFQLLHLSVLREYVWAEFTRDMPEETAAEMDRERVVDDFVFLTFLVGNDF 303
Query: 238 LPHMPTLEIREGAINLLMAVYK--KEFRALGGYLT-DGSKPSLRRVEHFIQAVGSYEDRI 294
LPHMP+L+I E A +LL +Y+ K GGYLT +G+ R+E F+ VGS ED I
Sbjct: 304 LPHMPSLDIGEEAFSLLFQIYRSLKPGWGSGGYLTREGTIDCADRLEAFLSEVGSREDEI 363
Score = 63.5 bits (153), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 432 GEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYA 491
G +K RYY EKF TP E + Y EGL W + YYY G SW WF+P+HY
Sbjct: 425 GGKDYKGRYYFEKFGI-TPLH-TEIHDRLRAAYVEGLLWCLAYYYRGCVSWGWFFPFHYV 482
Query: 492 PFASDL 497
P SDL
Sbjct: 483 PMISDL 488
>gi|195133694|ref|XP_002011274.1| GI16439 [Drosophila mojavensis]
gi|193907249|gb|EDW06116.1| GI16439 [Drosophila mojavensis]
Length = 1816
Score = 223 bits (569), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 116/298 (38%), Positives = 170/298 (57%), Gaps = 43/298 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR++++A ++ E + R+ K + + FDSN ITPGTEFM L
Sbjct: 94 MNQQRSRRFRSAREA-----------EQLEAKARQRGEKREHERFDSNCITPGTEFMVRL 142
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+ ++ +++ DP W+K +VILS PGEGEHKIM Y+R + P +DPNTRHCLY
Sbjct: 143 QAGLRCFLRTKISQDPLWQKCRVILSGQETPGEGEHKIMDYIRYMKAQPTFDPNTRHCLY 202
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLI+L L THE+HF +LRE V +F
Sbjct: 203 GLDADLIILGLCTHELHFVVLREEV-------------------------------KFGR 231
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEF-RIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
V + + LH+ LREYL+ EF + P ++D+ ++DD++ M F VGNDF+P
Sbjct: 232 NVKRTSVEETRFFLLHLGLLREYLELEFHELSTPEQKLDVAQLIDDWVLMGFMVGNDFIP 291
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
H+P L I A+ LL Y + ++ LGG + + K +L R++ F+ A+ E ++F++
Sbjct: 292 HLPCLHISSNALPLLYKTYIRIYKQLGGNINEHGKLNLDRLQQFLHALSEVELQLFEE 349
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 74/164 (45%), Positives = 103/164 (62%), Gaps = 3/164 (1%)
Query: 435 GWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA 494
+K YY KF E E+ ++ Y + WV+ YYY GV SW W+YP+HYAPF
Sbjct: 416 NYKRNYYRNKFKN---EMHEDLISELSYHYISAIQWVLDYYYRGVQSWDWYYPFHYAPFI 472
Query: 495 SDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDF 554
SDL ++ ++F++G PF PF QLL V P+AS + LP Y LM PNSP+++FYPT+F
Sbjct: 473 SDLNNIKNTKVNFKMGKPFLPFQQLLAVLPAASVNLLPMAYHDLMLKPNSPLAEFYPTEF 532
Query: 555 EVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
E D+NGK++ W+ + +PFI+E RLL + E L+ EE RN
Sbjct: 533 ESDLNGKKHDWEAVVLIPFIEEKRLLSAMADCEPQLSVEERERN 576
>gi|407420481|gb|EKF38586.1| 5'-3' exonuclease XRNA, putative [Trypanosoma cruzi marinkellei]
Length = 1446
Score = 223 bits (569), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 128/321 (39%), Positives = 182/321 (56%), Gaps = 38/321 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RR+R+ D + RQE +G ++P + D VFDSN ITPGT FM +
Sbjct: 94 MNQQRQRRYRSGYDLMVA-------RQEAIAQGEEVPDEKD--VFDSNCITPGTNFMVRV 144
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S LQY+I +++ DP W+ +V+ S + PGEGEHKI+ ++R ++ P Y PN HC+Y
Sbjct: 145 SEQLQYFITMKIAMDPAWQNCQVVYSGHDSPGEGEHKIVDFIRRRKMQPEYSPNETHCMY 204
Query: 121 GLDADLIMLALATHEVHFSILREVV-FTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADL+ML+LATHE HF +LREVV F PGQ E + R+ E D
Sbjct: 205 GLDADLVMLSLATHEPHFLLLREVVTFGPGQ-----------------ESRRAREQREED 247
Query: 180 EKGDEVVVPKKPYQ------FLHIWTLREYLDYEFR---IPNPPFEIDLECIVDDFIFMC 230
E +V K Y+ H+ LR+YLD + R P DLE ++DDF+ MC
Sbjct: 248 EANG--IVADKSYRKADEFVLFHVNVLRDYLDLDVRGKLGAKLPANYDLERVLDDFVLMC 305
Query: 231 FFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSY 290
FFVGNDFLP +PTL I +G++ ++ +Y K G YLT+ + + R VE ++Q +
Sbjct: 306 FFVGNDFLPTIPTLGIHDGSLLQMIDLYCKCILVEGVYLTNQGQINWRAVELWLQGISEL 365
Query: 291 EDRIFQKRARLHQRHAERIKR 311
E + R + + + ++ R
Sbjct: 366 ELTTIKARQQQEEEYQRKMTR 386
Score = 132 bits (333), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/228 (35%), Positives = 120/228 (52%), Gaps = 16/228 (7%)
Query: 386 IVEAENSFETDPQENKEEFKAKLKELLRD---KSDAFNSDNPEEDKVKLGEPGWKERYYE 442
I E E + Q+ +EE++ K+ RD ++ A S + E + +KER+Y
Sbjct: 362 ISELELTTIKARQQQEEEYQRKMTR--RDPTHEAAAITSAHIESIR------DYKERFYR 413
Query: 443 EK--FNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDL 500
EK F+ + +E D+ L Y EGL WVM YYY+G SW+WF+P+HYAP ASDL +L
Sbjct: 414 EKHGFDKGWDPQGKEM-ADLRLHYVEGLMWVMGYYYQGPPSWKWFFPHHYAPMASDLVNL 472
Query: 501 DQF--NISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDM 558
+ F+ G PF P QLL V P S ++P Y LM SP+ F+P ++D
Sbjct: 473 PAIAARVEFDPGKPFLPHQQLLAVLPPMSYRSMPRAYWPLMLSDKSPLKRFFPEILQIDR 532
Query: 559 NGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 606
R W+GI +PFI+E LL + +++ + E+ N + LF
Sbjct: 533 ENARAPWEGIVLIPFIEERVLLAAYQSVQNKVEPEDEVHNRLGPATLF 580
>gi|242792196|ref|XP_002481904.1| exonuclease Kem1, putative [Talaromyces stipitatus ATCC 10500]
gi|218718492|gb|EED17912.1| exonuclease Kem1, putative [Talaromyces stipitatus ATCC 10500]
Length = 1417
Score = 223 bits (567), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 122/284 (42%), Positives = 172/284 (60%), Gaps = 43/284 (15%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR++ DA A+E+ + Q E PK D+ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRARRFRSALDA--EVAKEKAIAQGIEM------PKEDA--FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+I +++ D W+ + ++LS VPGEGEHKIM Y+R + P YDPN RHCLY
Sbjct: 144 TKQLKYFISKKISEDVDWQGVDIVLSGHEVPGEGEHKIMEYIRQAKAQPDYDPNVRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ +F +LRE V T G+Q A++K+ E +
Sbjct: 204 GLDADLIMLGLLSHDPYFCLLREEV-TFGRQ-------------------AQKKSKELEH 243
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFR----IPNPPFEIDLECIVDDFIFMCFFVGND 236
+ + LH+ +REYL+ EF+ I + + D+E I+DDFI M FFVGND
Sbjct: 244 QN---------FYLLHLCIVREYLELEFQELKAIKDSSIDFDMERIIDDFILMAFFVGND 294
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRV 280
FLP++P + I EGA+ L+ YK+ +GGY+ + +L+R+
Sbjct: 295 FLPNLPHMHINEGALALMFTKYKEALPKMGGYINEYGTINLQRL 338
Score = 182 bits (462), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 85/172 (49%), Positives = 106/172 (61%), Gaps = 2/172 (1%)
Query: 436 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 495
WK +YY EKF +E T+ + Y +GL WV+ YYY GV SW W++ YHYAP S
Sbjct: 516 WKNKYYMEKFGHGLEDEAAMTK--LTENYVQGLQWVLFYYYRGVVSWPWYFQYHYAPMIS 573
Query: 496 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 555
D+K NI F+LG PF+PF QL+GV P S +P Y LMT P+SPI DFYP DFE
Sbjct: 574 DVKKGLGANIDFKLGQPFRPFQQLMGVLPDRSKKIVPPAYWDLMTSPDSPIIDFYPRDFE 633
Query: 556 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
+DMNGK+ W+ + K+PFIDE RLL + EH LT EE RN + F
Sbjct: 634 LDMNGKKMEWEAVVKIPFIDEKRLLPAMASREHLLTPEERGRNEFGVTLKFT 685
>gi|164655455|ref|XP_001728857.1| hypothetical protein MGL_4024 [Malassezia globosa CBS 7966]
gi|159102743|gb|EDP41643.1| hypothetical protein MGL_4024 [Malassezia globosa CBS 7966]
Length = 1426
Score = 223 bits (567), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 136/324 (41%), Positives = 180/324 (55%), Gaps = 45/324 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR +++A ++ ++ R G +LP +S FDSN ITPGT FM L
Sbjct: 40 MNQQRSRRFRTAQEAKENV-------EKAIRRGEELP---ESPPFDSNCITPGTSFMRKL 89
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S L+Y++ +++ D W ++VILS GEGEHKIM ++R + PGY+PNTRHCLY
Sbjct: 90 SQQLEYFVAKKVSEDSDWRGVEVILSGHEACGEGEHKIMEFIRTIKAQPGYNPNTRHCLY 149
Query: 121 GLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADLIML L +H+ HF++LRE V F P +A+R G
Sbjct: 150 GLDADLIMLGLLSHDPHFALLREQVTFGP--------------------RRARRSVG--- 186
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
V + + LHI LREYL+ EF PF DLE I+DD+I + FVGNDF
Sbjct: 187 -------VESQTFYLLHISLLREYLELEFASLRDKLPFAFDLEKIIDDYILLHLFVGNDF 239
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYE-DR-IF 295
LPH+P L+I +GAI LL VY+K GGYL + R++ I + E DR +
Sbjct: 240 LPHLPGLQINDGAIELLFRVYEKVLPQAGGYLNEQGVLRPERLQLVINQLFQLERDRFVH 299
Query: 296 QKRARLHQRHAERIKREKAQARRG 319
Q +L Q+ R RE R G
Sbjct: 300 QHMPQLEQKTKARRTRELKNYRVG 323
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/171 (49%), Positives = 109/171 (63%), Gaps = 2/171 (1%)
Query: 436 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 495
WK YY K K + + +D+V Y EG+ WV++YYYEG SW WFY YHYAP S
Sbjct: 485 WKADYYHTKMGIKYNDP--DAIQDIVYNYIEGMQWVLYYYYEGNASWGWFYRYHYAPQVS 542
Query: 496 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 555
DLK++ F F G PF PF QL+GV P S +P ++ LMTDP+SPI DFYPT +E
Sbjct: 543 DLKNISDFTFQFNKGRPFLPFEQLMGVLPPLSKDLIPPAFQPLMTDPSSPILDFYPTKYE 602
Query: 556 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 606
DMNGK+ SW+ + K+PFIDE RLL ++ E LT EE +RN++ + F
Sbjct: 603 SDMNGKKNSWEAVVKIPFIDEERLLHALQLREGGLTAEERQRNTLGVPLRF 653
>gi|224060082|ref|XP_002195477.1| PREDICTED: 5'-3' exoribonuclease 1 [Taeniopygia guttata]
Length = 1699
Score = 223 bits (567), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 121/298 (40%), Positives = 171/298 (57%), Gaps = 43/298 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKALEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+++++++ D W+ I V LS PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 NEHLKYFVNMKISTDKSWQGITVYLSGHETPGEGEHKIMEFIRSEKAKPHHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HF++LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFALLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF FE D+E I+DD+I M F VGNDF
Sbjct: 234 KAQRVCAPEETTFHLLHLSLMREYIDYEFSPVKDKISFEYDIERIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 295
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F
Sbjct: 294 IPHLPHLHINHDALPLLYRTYMAILPELGGYINENGHLNLERFEKYLAKLSDFDREHF 351
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 113/186 (60%), Gaps = 3/186 (1%)
Query: 422 DNPEEDKVKLGE-PGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVC 480
D PE+D + E +K YY K + + D Y + + W++HYYY GV
Sbjct: 418 DEPEDDDLFETEFRQYKRTYYMTKMGVEVVSD--AFLADQAECYVQAIQWILHYYYHGVQ 475
Query: 481 SWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMT 540
SW W+YPYHYAP+ SD+ ++ + I FELG PF PF QLL V P+AS LP+ Y+ LMT
Sbjct: 476 SWSWYYPYHYAPYLSDIHNISELKIKFELGKPFMPFEQLLAVLPAASKDLLPKCYQHLMT 535
Query: 541 DPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSI 600
+SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL ++ L EEE RRN+
Sbjct: 536 SQDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLQAMESCNKGLKEEEKRRNTH 595
Query: 601 MADMLF 606
A +++
Sbjct: 596 SACLMY 601
>gi|66819171|ref|XP_643245.1| 5'-3' exoribonuclease [Dictyostelium discoideum AX4]
gi|60471408|gb|EAL69368.1| 5'-3' exoribonuclease [Dictyostelium discoideum AX4]
Length = 1749
Score = 222 bits (565), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 120/294 (40%), Positives = 165/294 (56%), Gaps = 49/294 (16%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
+NQQR RRF S +E+L+Q+ EG+ +P +F+ ITPGT+FM L
Sbjct: 93 INQQRQRRFL-------SVHRDEKLKQKLISEGKPVP----EVIFNRTAITPGTQFMYNL 141
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S ++Q+YI +++ D W +++VI S PGEGEHKI+ Y+R + P +D N HCLY
Sbjct: 142 SESIQFYIKKKISEDLSWREVRVIFSGPENPGEGEHKIIDYIRKNKASPDWDANQSHCLY 201
Query: 121 GLDADLIMLALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADLI+L L THE +FSILR E+ F P KR+
Sbjct: 202 GLDADLILLGLITHEPNFSILREEISFKP----------------------TKRQLD--- 236
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
+Q LHI LREYLD E R + F DLE I+DDFI + F GNDFLP
Sbjct: 237 ------------FQLLHISLLREYLDLELRNDDLEFGYDLERIIDDFILIMIFFGNDFLP 284
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDR 293
H+P LEI +G +N + +YK +LGGYLT+G+ L R++HF + + +E +
Sbjct: 285 HLPFLEISKGGLNSIFELYKSSLPSLGGYLTEGATIDLERLQHFFKFLQKFEKK 338
Score = 154 bits (388), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 87/216 (40%), Positives = 121/216 (56%), Gaps = 14/216 (6%)
Query: 398 QENKEEFKAKLKELLRDKSDAFNSDNPEED---KVKLGEPGWKERYYEEKFNA--KTPEE 452
+E K+EF+ E L+ +S++ EED ++ + YY + FN T +E
Sbjct: 374 EEAKKEFERLAMERLKSHFPVSDSEDGEEDPDEQLVNELYNVENSYYRQYFNEFPNTLDE 433
Query: 453 REETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHP 512
+ ++ VVL Y EGL WV++YY+ G SW WFYP++YAP A D ++ +I F+ G P
Sbjct: 434 IKAFKEKVVLSYVEGLVWVLNYYHNGCISWVWFYPFYYAPLAIDFNNIPDLHIDFQPGEP 493
Query: 513 FKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLP 572
PF QLL V P S +P+ Y+ LM D SPI DFYP +FE+D Y + GIA+L
Sbjct: 494 ITPFQQLLSVLPPQSVDLIPKSYQTLMLDLFSPIIDFYPVEFEIDTKDPHY-FDGIAELG 552
Query: 573 FIDEARLLDEVKKIEHTL--------TEEEARRNSI 600
FID RLLD I+ +L T+EE RNSI
Sbjct: 553 FIDHQRLLDATASIKKSLAQSGQKVFTDEEEARNSI 588
>gi|380020587|ref|XP_003694164.1| PREDICTED: 5'-3' exoribonuclease 1-like [Apis florea]
Length = 1627
Score = 222 bits (565), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 122/294 (41%), Positives = 165/294 (56%), Gaps = 43/294 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
+NQQRSRRF+A+KDA A+ + +E R FDSN ITPGT FM+ L
Sbjct: 94 INQQRSRRFKAAKDAQIQEAKAKAKGINLPKEKR----------FDSNCITPGTLFMSKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+I +++ D W+K KVILS + VPGEGEHKIM Y+R + P YD NT+HCLY
Sbjct: 144 DEQLKYFITYKISTDKLWQKCKVILSGSQVPGEGEHKIMDYIRHMKAQPNYDVNTKHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADLIML L THE+HF++LRE + F GK +RK
Sbjct: 204 GLDADLIMLGLCTHEIHFTLLREELTF----------------------GKKQRKVCLTP 241
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNP--PFEIDLECIVDDFIFMCFFVGNDF 237
E+ + H+ LREY+++EF PF DLE I+DD+I M F +GNDF
Sbjct: 242 EETK--------FCLFHLSLLREYINHEFSSLKEKLPFSYDLEKIIDDWILMGFLIGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYE 291
+PH+P L I GA+++L VY L GY+ + L R E F++ + ++
Sbjct: 294 IPHLPNLHIIHGALSVLYQVYIDVMPTLDGYINEAGTLRLDRFEKFMERLSRFD 347
Score = 153 bits (387), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 64/135 (47%), Positives = 86/135 (63%)
Query: 464 YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVF 523
Y + W ++YYY G CSW W+YP+HYAP+ SD+KD + FELG PF PF QLL V
Sbjct: 459 YVRAIQWNLNYYYNGCCSWSWYYPHHYAPYISDIKDFKDLKLEFELGEPFLPFEQLLAVL 518
Query: 524 PSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEV 583
PS S LP ++ L+T+ SPI ++YP++FE D+NGK W+ + +PFI+E LLD +
Sbjct: 519 PSYSKELLPSAFQTLLTEEQSPIINYYPSEFETDLNGKEQEWEAVVLIPFINEKDLLDAM 578
Query: 584 KKIEHTLTEEEARRN 598
LT EE RN
Sbjct: 579 APHYSKLTLEEQARN 593
>gi|348531416|ref|XP_003453205.1| PREDICTED: 5'-3' exoribonuclease 1 [Oreochromis niloticus]
Length = 1692
Score = 222 bits (565), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 123/300 (41%), Positives = 174/300 (58%), Gaps = 42/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A EE++++ ++ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EEKIKKALDK-GEVLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y++H +L+ND W+ +KV LS PGEGEHKIM ++R + P +DPNTRHCLY
Sbjct: 144 QEQLKYFVHNKLSNDKLWQNVKVYLSGHETPGEGEHKIMEFIRSENTKPNHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE +FS+LRE V R G+ +
Sbjct: 204 GLDADLIMLGLTSHEPNFSLLREEV---------------------------RFGGKKSQ 236
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRIPNPPF--EIDLECIVDDFIFMCFFVGNDF 237
K + P++ + LH+ +REY+DYEF + DLE ++DD+I M F VGNDF
Sbjct: 237 K--RITAPEETTFHLLHLSLMREYIDYEFSELKNKMGSDYDLERVIDDWILMGFLVGNDF 294
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y +LGGYL + +LR E +++ + ++ F +
Sbjct: 295 IPHLPNLHINHDALPLLYKTYISVLPSLGGYLNENGHLNLRNFEKYLEKLAEFDREHFNE 354
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 101/164 (61%), Gaps = 2/164 (1%)
Query: 436 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 495
+K YY K + E + Y EG+ W++HYYY GV SW W+YPYHYAP+ S
Sbjct: 433 YKRTYYMNKIGVDVVSD--EFLANQAKCYVEGIQWILHYYYHGVQSWSWYYPYHYAPYLS 490
Query: 496 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 555
D++++ ++FELG PF PF QLL V P+AS LPE YR LMT +SPI +YP DF+
Sbjct: 491 DIRNVSGLKLTFELGQPFMPFQQLLAVLPAASMELLPECYRHLMTSESSPIIGYYPLDFK 550
Query: 556 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 599
D+NGK+ W+ + +PFIDE LL ++ LT+EE RN
Sbjct: 551 TDLNGKQQEWEAVVLIPFIDERCLLAAMEPCNSKLTKEEKARNC 594
>gi|66514180|ref|XP_393481.2| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Apis mellifera]
Length = 1633
Score = 222 bits (565), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 124/294 (42%), Positives = 169/294 (57%), Gaps = 43/294 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
+NQQRSRRF+A+KDA +E + R + G LP + + FDSN ITPGT FM+ L
Sbjct: 94 INQQRSRRFKAAKDAQ---IQEAKARAK----GINLPKE---KRFDSNCITPGTLFMSKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+I +++ D W+K KVILS + VPGEGEHKIM Y+R + P YD NT+HCLY
Sbjct: 144 DEQLKYFITYKISTDKLWQKCKVILSGSQVPGEGEHKIMDYIRHMKAQPNYDVNTKHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADLIML L THE+HF++LRE + F GK +RK
Sbjct: 204 GLDADLIMLGLCTHEIHFTLLREELTF----------------------GKKQRKVCLTP 241
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNP--PFEIDLECIVDDFIFMCFFVGNDF 237
E+ + H+ LREY+++EF PF DLE I+DD+I M F +GNDF
Sbjct: 242 EETK--------FCLFHLSLLREYINHEFSSLKEKLPFSYDLEKIIDDWILMGFLIGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYE 291
+PH+P L I GA+++L VY L GY+ + L R E F++ + ++
Sbjct: 294 IPHLPNLHIIHGALSVLYQVYIDVMPTLDGYINEAGTLRLDRFEKFMERLSRFD 347
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 86/135 (63%)
Query: 464 YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVF 523
Y + W ++YYY G CSW W+YP+HYAP+ SD+KD + FELG PF PF QLL V
Sbjct: 459 YVRAIQWNLNYYYNGCCSWSWYYPHHYAPYISDIKDFKDLKLEFELGEPFLPFEQLLAVL 518
Query: 524 PSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEV 583
PS S LP ++ L+T+ SPI ++YP++FE D+NGK W+ + +PFI+E LLD +
Sbjct: 519 PSYSKELLPSAFQTLLTEEQSPIINYYPSEFETDLNGKEQEWEAVVLIPFINEKDLLDAM 578
Query: 584 KKIEHTLTEEEARRN 598
L+ EE RN
Sbjct: 579 APHYSKLSLEEQARN 593
>gi|403304034|ref|XP_003942618.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 1706
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 119/300 (39%), Positives = 172/300 (57%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF + PF+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSVLKEKIPFKYDIERIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 172 bits (437), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 105/163 (64%), Gaps = 2/163 (1%)
Query: 436 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 495
+K YY K + + D Y + + W++HYYY GV SW W+YPYHYAPF S
Sbjct: 433 YKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLS 490
Query: 496 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 555
D++++ I FELG PFKPF QLL V P+AS + LP Y+ LMT +SPI ++YP DF+
Sbjct: 491 DIRNISTLRIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTSEDSPIIEYYPPDFK 550
Query: 556 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +RN
Sbjct: 551 TDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 593
>gi|403304036|ref|XP_003942619.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 1694
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 119/300 (39%), Positives = 172/300 (57%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF + PF+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSVLKEKIPFKYDIERIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 172 bits (437), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 105/163 (64%), Gaps = 2/163 (1%)
Query: 436 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 495
+K YY K + + D Y + + W++HYYY GV SW W+YPYHYAPF S
Sbjct: 433 YKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLS 490
Query: 496 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 555
D++++ I FELG PFKPF QLL V P+AS + LP Y+ LMT +SPI ++YP DF+
Sbjct: 491 DIRNISTLRIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTSEDSPIIEYYPPDFK 550
Query: 556 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +RN
Sbjct: 551 TDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 593
>gi|341884867|gb|EGT40802.1| hypothetical protein CAEBREN_29959 [Caenorhabditis brenneri]
Length = 992
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 134/332 (40%), Positives = 187/332 (56%), Gaps = 30/332 (9%)
Query: 429 VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPY 488
++L E GWK+RYY KF+ + + E R V Y EGLCWV+ YYY+G SW W++PY
Sbjct: 555 IRLFESGWKDRYYRAKFDVGS--DDVEFRHRVAWAYVEGLCWVLRYYYQGCSSWDWYFPY 612
Query: 489 HYAPFASDLKDLDQFNISFEL-GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPIS 547
HYAPFASD + + F F PF P QL+ VFP+AS LP ++KLMT+ SPI
Sbjct: 613 HYAPFASDFETVGDFKPDFSRPTKPFNPLEQLMSVFPAASKQHLPVEWQKLMTEDESPII 672
Query: 548 DFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
D YP DF +D+NGK+Y+WQG+A LPF+DE RLL+ +K + TLT+EE RN+ + +F+
Sbjct: 673 DLYPADFRIDLNGKKYAWQGVALLPFVDEQRLLETLKTVYPTLTDEEKMRNTRGPNRIFI 732
Query: 608 LLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPV-FRSP 666
+H A T+ E K E V+ L+P L +G++G I+ + P + F SP
Sbjct: 733 GRNHKSFAFFNTVAES----KSTELVD----LDPSLLNGVSGKIAADSTATAPGLPFVSP 784
Query: 667 V--ASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLKPA-----PVLWH 719
V A +D+ N +C +Y+ P+ P G IFP V+LE K A P W+
Sbjct: 785 VNHADCQDLPTNCGICVLYEDPEY-------PPGYIFPA--VRLEGAKEAEKTLKPEDWN 835
Query: 720 EDSGRRPHENGRHNPHGTISGRQLGEAAHRLV 751
E R H N + G L +++HR V
Sbjct: 836 ERRDGRFHPQVGFNRNAPRGG--LDQSSHRHV 865
>gi|289577074|ref|NP_957327.2| 5'-3' exoribonuclease 1 [Danio rerio]
Length = 1697
Score = 221 bits (563), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 123/300 (41%), Positives = 173/300 (57%), Gaps = 42/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A EE++++ E+ G LP ++ FDSN ITPGT+FMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EEKIKKALEK-GEVLPTEAR---FDSNCITPGTDFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y++H +L+ D W+ + V LS PGEGEHKIM ++R + PG++PNTRHCLY
Sbjct: 144 QEQLKYFVHNKLSTDKTWQGVNVYLSGHETPGEGEHKIMEFIRSESTKPGHNPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V R G+ +
Sbjct: 204 GLDADLIMLGLTSHEPHFSLLREEV---------------------------RFGGKKSQ 236
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDF 237
K + P++ + LH+ +REY+DYEF FE DLE I+DD++ M F VGNDF
Sbjct: 237 K--RITAPEETTFHLLHLSLMREYIDYEFSELRKKISFEYDLERIIDDWVLMGFLVGNDF 294
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y +LGGYL + +L E +++ + ++ F +
Sbjct: 295 IPHLPHLHINHDALPLLYRTYINVLPSLGGYLNENGHLNLTHFEKYLEKLSDFDREHFSE 354
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 75/184 (40%), Positives = 110/184 (59%), Gaps = 2/184 (1%)
Query: 415 KSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 474
+++ D ++D + +K YY K + + E + Y EG+ W++HY
Sbjct: 414 RAEGAEEDGEDDDMFETEFRQYKRTYYMTKMGVEVVSD--EFLANQAKCYVEGIQWILHY 471
Query: 475 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEH 534
YY GV SW W+YPYHYAPF SD++++ +++F+L PF PF QLL V PSAS LP+
Sbjct: 472 YYHGVQSWSWYYPYHYAPFLSDVRNISGLSLTFDLAKPFMPFEQLLAVLPSASKDLLPQC 531
Query: 535 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 594
Y+ LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE LL ++ H LT E
Sbjct: 532 YQHLMTSLSSPIVEYYPQDFKTDLNGKQQEWEAVVLIPFIDEKCLLAAMEPYTHNLTPSE 591
Query: 595 ARRN 598
RN
Sbjct: 592 KARN 595
>gi|50549393|ref|XP_502167.1| YALI0C23144p [Yarrowia lipolytica]
gi|49648034|emb|CAG82487.1| YALI0C23144p [Yarrowia lipolytica CLIB122]
Length = 1526
Score = 221 bits (563), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 126/302 (41%), Positives = 174/302 (57%), Gaps = 45/302 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR + DA E+ + + EG L K D FDSN ITPGTEFM L
Sbjct: 93 MNQQRSRRFRTALDA-------EKAKAKALEEGTIL--KEDQ--FDSNAITPGTEFMEKL 141
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L Y++H +++ D W+ I ++LS VPGEGEHKI +R+ + P YDPNTRHC+Y
Sbjct: 142 TTQLNYFVHKKVSEDADWQNIDIVLSGHEVPGEGEHKINECIRINKAQPDYDPNTRHCVY 201
Query: 121 GLDADLIMLALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADLIML L +H+ HFS+LR EVVF P R+AG
Sbjct: 202 GLDADLIMLGLGSHDPHFSLLREEVVFGP------------------------RRAG--- 234
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDF 237
+ ++ + LHI LREYL+ EF+ F D E I+DD+I + FFVGNDF
Sbjct: 235 ----PKALEEQNFYLLHISLLREYLELEFQDLADEISFPYDFERILDDYILLFFFVGNDF 290
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
LP++P + I E + L + +YKK + GY+ D +L+R++ F+ + +E IF++
Sbjct: 291 LPNLPQIHINEDSHALFVELYKKVMKISDGYINDRGNINLQRLDLFLAEMEKFEIGIFEE 350
Query: 298 RA 299
+A
Sbjct: 351 QA 352
Score = 186 bits (471), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 113/172 (65%), Gaps = 1/172 (0%)
Query: 436 WKERYYEEKFN-AKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA 494
WK+ YY++KF + T +E + K + Y EGL W++HYYY+GV SW W+Y YHYAP
Sbjct: 504 WKDDYYKKKFGWSTTTDEGKAELKALTENYVEGLQWILHYYYDGVPSWSWYYGYHYAPRV 563
Query: 495 SDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDF 554
SD++ Q N+ F+ G PFKPF QL+GV P S LP+ Y LM D NSPI DFYP DF
Sbjct: 564 SDVRKGLQANLKFKAGQPFKPFQQLMGVLPERSKKLLPQAYWPLMADSNSPIYDFYPNDF 623
Query: 555 EVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 606
E+D NGK+ W+ + K+PF+DE+RLL + E LT E +RN+ ++LF
Sbjct: 624 ELDKNGKKADWEAVVKIPFVDESRLLTAMATKETGLTAGENKRNAFGNNLLF 675
>gi|449278569|gb|EMC86380.1| 5'-3' exoribonuclease 1, partial [Columba livia]
Length = 1710
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 120/297 (40%), Positives = 171/297 (57%), Gaps = 41/297 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 69 MNQQRGRRFRSAKEA------EDKIKKALEK-GETLPTEAR---FDSNCITPGTEFMARL 118
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + V LS PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 119 HEHLKYFVNMKISTDKSWQGVTVYLSGHETPGEGEHKIMEFIRSEKAKPHHDPNTRHCLY 178
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HF++LRE V GK ++A +E
Sbjct: 179 GLDADLIMLGLTSHEAHFALLREEV--------------------RFGGKKSQRACAPEE 218
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFL 238
+ LH+ +REY+DYEF FE D+E I+DD+I M F VGNDF+
Sbjct: 219 TT---------FHLLHLSLMREYIDYEFSPVKDKISFEYDIERIIDDWILMGFLVGNDFI 269
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 295
PH+P L I A+ LL Y LGGY+ + +L+R E ++ + ++ F
Sbjct: 270 PHLPHLHINHDALPLLYRTYMAILPELGGYINENGHLNLKRFEKYLTKLSDFDREHF 326
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 114/186 (61%), Gaps = 3/186 (1%)
Query: 422 DNPEEDKVKLGE-PGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVC 480
D PE+D + E +K YY K + + + D Y + + W++HYYY GV
Sbjct: 391 DEPEDDDLFETEFRQYKRTYYMTKMGVEVVSD--DFLADQAECYVQAIQWILHYYYHGVQ 448
Query: 481 SWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMT 540
SW W+YPYHYAP+ SD++++ + I FELG PF PF QLL V P+AS LP+ Y+ LM
Sbjct: 449 SWSWYYPYHYAPYLSDIRNIGELKIKFELGKPFMPFEQLLAVLPAASKDLLPKCYQHLMI 508
Query: 541 DPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSI 600
+SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL ++ L EEE RRN+
Sbjct: 509 SQDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLQAMESCNKCLKEEEKRRNTH 568
Query: 601 MADMLF 606
A +++
Sbjct: 569 SACLMY 574
>gi|351699398|gb|EHB02317.1| 5'-3' exoribonuclease 1 [Heterocephalus glaber]
Length = 1707
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 119/300 (39%), Positives = 172/300 (57%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNVKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF + N F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSVLKENITFKYDIERIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 76/163 (46%), Positives = 106/163 (65%), Gaps = 2/163 (1%)
Query: 436 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 495
+K YY K + + D + Y + + W++HYYY GV SW W+YPYHYAPF S
Sbjct: 433 YKRTYYMTKMGVDVVSD--DFLADQAVCYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLS 490
Query: 496 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 555
D++++ I FELG PFKPF QLL V P+AS + LP Y+ LMT +SPI ++YP DF+
Sbjct: 491 DIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPVCYQHLMTSEDSPIIEYYPPDFK 550
Query: 556 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
D+NGK+ W+ + +PFIDE RLL+ ++ H+L EEE +RN
Sbjct: 551 TDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKEEERKRN 593
>gi|320590324|gb|EFX02767.1| exonuclease [Grosmannia clavigera kw1407]
Length = 1463
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 125/300 (41%), Positives = 171/300 (57%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR + DA E R++ EG +LP FDSN ITPGTEFMA L
Sbjct: 94 MNQQRSRRFRTALDA-------EVARKKAIAEGAQLPTDDP---FDSNCITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S LQY+++ +++ D W++ V+LS +VPGEGEHKIM Y+R + Y N RHCLY
Sbjct: 144 SKQLQYFVNKKVSEDKEWQQCTVVLSGHDVPGEGEHKIMEYIRNAKAQKDYSANMRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+Q K K+ E +
Sbjct: 204 GLDADLIMLGLLSHDPHFCLLREEV-TFGRQTKT-------------------KSKELEH 243
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFR----IPNPPFEIDLECIVDDFIFMCFFVGND 236
+ + LH+ +REYL+ EF+ PF ++E I+DDFI M FFVGND
Sbjct: 244 QN---------FYLLHLCIVREYLELEFQELKTDKTMPFAFNMERIIDDFILMAFFVGND 294
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP++P L I EGA+ + ++YK+ GY+ +G +L+R+ ++ E R F+
Sbjct: 295 FLPNLPRLHINEGALATMFSIYKRVLPKCEGYINEGGAVNLKRLGLLLEEFSKEEFRFFE 354
Score = 176 bits (445), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 85/183 (46%), Positives = 113/183 (61%), Gaps = 3/183 (1%)
Query: 436 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 495
WK+ YY EKF + EE RK + Y +GL WV++YYY G+ SW WFY YHY+P S
Sbjct: 555 WKDGYYREKFAWTDGQLSEEVRK-LCENYVQGLQWVLYYYYRGIASWPWFYHYHYSPLIS 613
Query: 496 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 555
D+ +++F+LG PFKPF QL+GV P S +P Y LMT+ +SPI DFYP DFE
Sbjct: 614 DVIKGLGADLNFKLGQPFKPFEQLMGVLPDRSKKIVPTVYWGLMTEEDSPIVDFYPRDFE 673
Query: 556 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSA 615
+DMNGK+ W+ + K+PFIDE RLL +K L+ +E RN A + F HP +
Sbjct: 674 LDMNGKKMEWEAVVKIPFIDERRLLTAMKPKNALLSADEQSRNEFGAPIEFTF--HPGTD 731
Query: 616 SIY 618
+Y
Sbjct: 732 FMY 734
>gi|83317292|ref|XP_731098.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23491026|gb|EAA22663.1| Drosophila melanogaster CG10354 gene product-related [Plasmodium
yoelii yoelii]
Length = 1286
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 132/362 (36%), Positives = 191/362 (52%), Gaps = 44/362 (12%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRF++ + LR +F E R +P + +DSN+ITPGT+FM L
Sbjct: 131 MNQQRSRRFKSILASEIEKRAYIELRNKFLSENRNVP--DEFHHWDSNIITPGTQFMHEL 188
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S+AL+Y+I ++ ND W+KI VI SDANV GEGEHKI ++++ QR GYDPNTRH ++
Sbjct: 189 SVALKYFIEHKITNDEKWKKIVVIFSDANVCGEGEHKIYNFIKSQRAQKGYDPNTRHVIH 248
Query: 121 GLDADLIMLALATHEVHFSILREVV-FTPGQQDK-------------------C--FLCG 158
G+DADLIML+LA+HE +F ILRE++ P +++K C FL
Sbjct: 249 GMDADLIMLSLASHEPYFYILREIINLDPKEENKPQVKDKYVGVFKGKGDLQYCTKFLRN 308
Query: 159 QPGHLAANCEGKAKRK-AGEFDEKGDEVVVPKKP----------YQFLHIWTLREYLDYE 207
K K+K ++D++ + Q L + LREYL +
Sbjct: 309 NNSTTIDGNNNKGKKKYCNKYDDRNYANINISSTCSINYENWNELQILDLSILREYLYKD 368
Query: 208 FRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGG 267
F + +LE +DDFIF+CF GNDFLPH+P++ I G+I+ L+ +Y+K LG
Sbjct: 369 FFFDT---KYNLERCIDDFIFICFLCGNDFLPHLPSISIASGSIDQLLLLYQKVLPVLGD 425
Query: 268 YLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARRGDDVEPLAQ 327
YL + + + FI + E F + + KREK + ++ P Q
Sbjct: 426 YLINEGSMNFQSFIKFISFIAEVERETFVSQYDFKK------KREKRELQKDAFKRPKCQ 479
Query: 328 PD 329
D
Sbjct: 480 DD 481
Score = 180 bits (456), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 99/251 (39%), Positives = 151/251 (60%), Gaps = 10/251 (3%)
Query: 387 VEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLG---EPG-WKERYYE 442
+ E S E + EF LKE ++ ++ +NP+ED V+LG +P + RYY+
Sbjct: 651 ISEEESPEMKKLNDITEFNLLLKEAVKKANEC---ENPKED-VELGADDDPNDLRTRYYK 706
Query: 443 EKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQ 502
KF+ + +E ++VV +Y EGL WV+ YY++ W W+YPY+YAP +SDL +
Sbjct: 707 SKFHLDESDNVDEFVQEVVYKYIEGLAWVLCYYFQECPMWHWYYPYYYAPLSSDLL-IKD 765
Query: 503 FNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKR 562
NISFE P PF QLL V PS SSH LP+ YR+LM SPI DFYP F+ + NGK+
Sbjct: 766 INISFEKDEPLLPFEQLLCVLPSNSSHCLPKMYRELMLKNESPIVDFYPKTFKEEENGKK 825
Query: 563 YSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYT-LD 621
+ +Q I LPF+++ R++ + ++ TLT+EE +RN + +++ +H LS I T +
Sbjct: 826 FKYQWIVLLPFVEKERIIRFARNLDDTLTDEEKKRNRRGLNKIYMSSTHTLSKKITTSMR 885
Query: 622 EHCKQLKIKER 632
+ K++K KE+
Sbjct: 886 TYIKEIKDKEK 896
>gi|363737031|ref|XP_422596.3| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Gallus gallus]
Length = 1736
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 121/297 (40%), Positives = 171/297 (57%), Gaps = 41/297 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKALEK-GEILPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ I V LS PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGITVYLSGHETPGEGEHKIMEFIRSEKAKPHHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L THE HF++LRE V GK ++A +E
Sbjct: 204 GLDADLIMLGLTTHEAHFALLREEV--------------------RFGGKKSQRACAPEE 243
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFL 238
+ LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF+
Sbjct: 244 TT---------FHLLHLSLMREYIDYEFSPVKDKISFDYDIEKIIDDWILMGFLVGNDFI 294
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 295
PH+P L I A+ LL Y LGGY+ + +L+R E ++ + ++ F
Sbjct: 295 PHLPHLHINHDALPLLYRTYMAILPELGGYINENGHLNLKRFEKYLTRLSDFDREHF 351
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 86/218 (39%), Positives = 123/218 (56%), Gaps = 11/218 (5%)
Query: 390 ENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGE-PGWKERYYEEKFNAK 448
ENS E E+ K +L D+ PE+D + E +K YY K +
Sbjct: 393 ENSLCLAALEKNEDEVVTSKTVLEDE--------PEDDDLFETEFRQYKRTYYMTKMGIE 444
Query: 449 TPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFE 508
+ + D Y + + W++HYYY GV SW W+YPYHYAP+ SD++++ + I FE
Sbjct: 445 VVSD--DFLADQAECYVQAIQWILHYYYHGVQSWSWYYPYHYAPYLSDIRNISELKIQFE 502
Query: 509 LGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGI 568
LG PF PF QLL V P+AS LP Y+ LM +SPI ++YP DF+ D+NGK+ W+ +
Sbjct: 503 LGKPFMPFEQLLAVLPAASKDLLPRCYQHLMVSQDSPIIEYYPLDFKTDLNGKQQEWEAV 562
Query: 569 AKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 606
+PFIDE RLL+ ++ L EEE RRN A +++
Sbjct: 563 VLIPFIDEKRLLEAMESCNKCLKEEEKRRNVHSACLMY 600
>gi|47216611|emb|CAG10909.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1574
Score = 220 bits (561), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 121/300 (40%), Positives = 176/300 (58%), Gaps = 42/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A EE++++ ++ G LP ++ FDSN ITPGT+FMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EEKIKKALDK-GEVLPTEAR---FDSNCITPGTDFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y++H +L+ D W+ ++V LS PGEGEHKIM ++R + N PG+DPNTRHCLY
Sbjct: 144 QEQLEYFVHSKLSTDKLWQNVRVYLSGHETPGEGEHKIMEFIRSENNGPGHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE +FS+LRE V G++ + KR
Sbjct: 204 GLDADLIMLGLTSHEPNFSLLREEVRFGGKKSQ------------------KR------- 238
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRIPNPPF--EIDLECIVDDFIFMCFFVGNDF 237
+ P++ + LH+ +REY+DYEF + DLE I+DD+I M F +GNDF
Sbjct: 239 ----ITAPEETTFHLLHLSLMREYIDYEFSVLRNHLGSTYDLERIIDDWILMGFLIGNDF 294
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y +LGGYL + +L+ E +++ + ++ F +
Sbjct: 295 IPHLPHLHISHDALPLLYKTYISVLPSLGGYLNENGNLNLKNFEKYLEKLSEFDREHFSE 354
Score = 160 bits (404), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 64/115 (55%), Positives = 84/115 (73%)
Query: 464 YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVF 523
Y EG+ W++HYYY GV SW W+YPYHYAPF SD+K++ + ++F+L PF PF QLL V
Sbjct: 447 YVEGIQWILHYYYHGVQSWSWYYPYHYAPFLSDIKNVAELKLTFDLEKPFMPFQQLLAVL 506
Query: 524 PSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEAR 578
P+AS LPE YR LMT NSPI ++YP DF+ D+NGK+ W+ + +PFIDE R
Sbjct: 507 PAASMELLPEAYRHLMTSENSPIIEYYPHDFKTDLNGKQQEWEAVVLIPFIDEVR 561
>gi|399215845|emb|CCF72533.1| unnamed protein product [Babesia microti strain RI]
Length = 803
Score = 220 bits (561), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 125/306 (40%), Positives = 175/306 (57%), Gaps = 19/306 (6%)
Query: 1 MNQQRSRRFRA--SKDAADSAAEEERLRQE--FEREGRKLPPKSDSQVFDSNVITPGTEF 56
MNQQRSRRF+A ++ A + ++ E + + +P +V+DSNVITPGT F
Sbjct: 107 MNQQRSRRFKAVYEREYAQKQLQNDKSTPETNLSKSRQNIPQNEQQKVWDSNVITPGTPF 166
Query: 57 MAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTR 116
M L + ++ Y+ RL N W + VI+SD+N PGEGEHKI++++R QR YDPNTR
Sbjct: 167 MYQLGLEVEEYVSNRLENSDIWHNLTVIISDSNSPGEGEHKIINFIRTQRQSSNYDPNTR 226
Query: 117 HCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAG 176
H ++G+DADLIMLALATHE +F ILREVV P +Q F ++ E K
Sbjct: 227 HVIHGMDADLIMLALATHEPNFFILREVV--PFKQ---FNSTTQPTISDTSETVPSLKYS 281
Query: 177 EFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGND 236
K K Q + I LREYL Y F+ DLE +DD + MCFF GND
Sbjct: 282 LMLRKS------WKQLQIIQIPVLREYLSYLFK----DCGCDLERCIDDLVLMCFFCGND 331
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLPH+P++ I G+I+ ++ +Y++ F LGGYLTD K ++ ++E F + + E
Sbjct: 332 FLPHLPSMSITLGSIDQMIYLYQQIFPTLGGYLTDCGKINMPQLEMFTSYLTAVEHETLS 391
Query: 297 KRARLH 302
+ H
Sbjct: 392 LKGNNH 397
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/180 (46%), Positives = 116/180 (64%), Gaps = 4/180 (2%)
Query: 429 VKLGEPG-WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYP 487
V LG P +K+ YY +K + + ++ +T + Y +G+ WV+ YYY+G+ SW W+YP
Sbjct: 431 VTLGSPEVYKKSYYIKKLDC-SEDDVAKTASAMAGEYVKGMEWVLEYYYQGIPSWNWYYP 489
Query: 488 YHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPIS 547
YHYAPFASDLK Q N+ F+LG PF P QL+ V P SSH LPE + LM SPI+
Sbjct: 490 YHYAPFASDLKFTTQ-NV-FQLGTPFTPLQQLMSVLPVQSSHCLPEKFADLMRSEVSPIA 547
Query: 548 DFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
++YP ++D NG RY +Q +A LPFIDE LL VK +E L++EE RN + ++ +FV
Sbjct: 548 EYYPRTLKLDPNGSRYRYQWVALLPFIDEQLLLATVKPLEEELSKEEKERNKLKSEKIFV 607
>gi|395833059|ref|XP_003789564.1| PREDICTED: 5'-3' exoribonuclease 1 [Otolemur garnettii]
Length = 1666
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 120/300 (40%), Positives = 174/300 (58%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+ KA+R
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK-------------------KAQR------- 237
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
V P++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF
Sbjct: 238 ----VCAPEETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 56/78 (71%)
Query: 464 YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVF 523
Y + + W++HYYY GV SW W+YPYHYAPF SD++++ I FELG PFKPF QLL V
Sbjct: 459 YVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVL 518
Query: 524 PSASSHALPEHYRKLMTD 541
P+AS + LP Y+K + +
Sbjct: 519 PAASKNLLPTCYQKRLLE 536
>gi|402585499|gb|EJW79439.1| single-stranded RNA 5'-3' exonuclease [Wuchereria bancrofti]
Length = 446
Score = 220 bits (560), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 117/287 (40%), Positives = 170/287 (59%), Gaps = 38/287 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRF ++K+A ++ ++ + +G K+P D + FDSN ITPGTEFMA L
Sbjct: 94 MNQQRARRFMSAKNAREALSKARK-------KGIKIP---DEKPFDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
LQY++ +++ D W+ +++ LS N PGEGEHKIM ++R +R+ YD NTRHCLY
Sbjct: 144 HEQLQYFVQMKITTDSCWQGLRIYLSGHNCPGEGEHKIMDFIRSERSRSDYDANTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML + +HE HF++LRE V G+ K + G+
Sbjct: 204 GLDADLIMLGICSHEPHFALLREEVKF---------------------GRQKNRNGKHRT 242
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEF--RIPNPPFEIDLECIVDDFIFMCFFVGNDFL 238
DE+ + LH+ LREYL +EF PF+ DLE ++DD++ M F +GNDF+
Sbjct: 243 SVDEIT-----FHLLHLSLLREYLSWEFYPLKEKLPFDYDLESVIDDWVLMGFLIGNDFI 297
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQ 285
PH+P + I E A+ LL A Y + L GY+ + +L+R E F++
Sbjct: 298 PHLPHVHIHEDALPLLYATYNEVLPQLDGYINEAGILNLKRFEIFLK 344
>gi|110624792|ref|NP_061874.3| 5'-3' exoribonuclease 1 isoform a [Homo sapiens]
gi|74714582|sp|Q8IZH2.1|XRN1_HUMAN RecName: Full=5'-3' exoribonuclease 1; AltName:
Full=Strand-exchange protein 1 homolog
gi|24474444|gb|AAN11306.1| DNA strand-exchange protein SEP1 [Homo sapiens]
gi|119599377|gb|EAW78971.1| 5'-3' exoribonuclease 1, isoform CRA_a [Homo sapiens]
gi|146327192|gb|AAI41556.1| 5'-3' exoribonuclease 1 [synthetic construct]
gi|261857762|dbj|BAI45403.1| 5'-3' exoribonuclease 1 [synthetic construct]
Length = 1706
Score = 219 bits (558), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 171/300 (57%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 172 bits (436), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 115/189 (60%), Gaps = 3/189 (1%)
Query: 410 ELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLC 469
E++ K D + ++D + +K YY K + + D Y + +
Sbjct: 408 EMITSK-DNLEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQ 464
Query: 470 WVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSH 529
W++HYYY GV SW W+YPYHYAPF SD+ ++ I FELG PFKPF QLL V P+AS +
Sbjct: 465 WILHYYYHGVQSWSWYYPYHYAPFLSDIHNISTLKIHFELGKPFKPFEQLLAVLPAASKN 524
Query: 530 ALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHT 589
LP Y+ LMT+ +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+
Sbjct: 525 LLPACYQHLMTNEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHS 584
Query: 590 LTEEEARRN 598
L +EE +RN
Sbjct: 585 LKKEERKRN 593
>gi|34365218|emb|CAE45950.1| hypothetical protein [Homo sapiens]
Length = 1706
Score = 219 bits (558), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 171/300 (57%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 172 bits (436), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 115/189 (60%), Gaps = 3/189 (1%)
Query: 410 ELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLC 469
E++ K D + ++D + +K YY K + + D Y + +
Sbjct: 408 EMITSK-DNLEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQ 464
Query: 470 WVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSH 529
W++HYYY GV SW W+YPYHYAPF SD+ ++ I FELG PFKPF QLL V P+AS +
Sbjct: 465 WILHYYYHGVQSWSWYYPYHYAPFLSDIHNISTLKIHFELGKPFKPFEQLLAVLPAASKN 524
Query: 530 ALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHT 589
LP Y+ LMT+ +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+
Sbjct: 525 LLPACYQHLMTNEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHS 584
Query: 590 LTEEEARRN 598
L +EE +RN
Sbjct: 585 LKKEERKRN 593
>gi|410266386|gb|JAA21159.1| 5'-3' exoribonuclease 1 [Pan troglodytes]
Length = 1706
Score = 219 bits (558), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 171/300 (57%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAVEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 172 bits (436), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 115/189 (60%), Gaps = 3/189 (1%)
Query: 410 ELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLC 469
E++ K D + ++D + +K YY K + + D Y + +
Sbjct: 408 EMITSK-DNLEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQ 464
Query: 470 WVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSH 529
W++HYYY GV SW W+YPYHYAPF SD+ ++ I FELG PFKPF QLL V P+AS +
Sbjct: 465 WILHYYYHGVQSWSWYYPYHYAPFLSDIHNISTLKIHFELGKPFKPFEQLLAVLPAASKN 524
Query: 530 ALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHT 589
LP Y+ LMT+ +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+
Sbjct: 525 LLPACYQHLMTNEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHS 584
Query: 590 LTEEEARRN 598
L +EE +RN
Sbjct: 585 LKKEERKRN 593
>gi|402861338|ref|XP_003895054.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Papio anubis]
Length = 1706
Score = 219 bits (558), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 171/300 (57%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 172 bits (436), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 115/189 (60%), Gaps = 3/189 (1%)
Query: 410 ELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLC 469
E++ K D + ++D + +K YY K + + D Y + +
Sbjct: 408 EMVTSK-DNLEDETEDDDLFETEFRQYKRTYYMTKMGVDIVSD--DFLADQAACYVQAIQ 464
Query: 470 WVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSH 529
W++HYYY GV SW W+YPYHYAPF SD++++ I FELG PFKPF QLL V P+AS +
Sbjct: 465 WILHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLRIHFELGKPFKPFEQLLAVLPAASKN 524
Query: 530 ALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHT 589
LP Y+ LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+
Sbjct: 525 LLPTCYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHS 584
Query: 590 LTEEEARRN 598
L +EE +RN
Sbjct: 585 LKKEERKRN 593
>gi|380813908|gb|AFE78828.1| 5'-3' exoribonuclease 1 isoform a [Macaca mulatta]
Length = 1707
Score = 219 bits (557), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 171/300 (57%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRYGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 172 bits (436), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 115/189 (60%), Gaps = 3/189 (1%)
Query: 410 ELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLC 469
E++ K D + ++D + +K YY K + + D Y + +
Sbjct: 408 EMVTSK-DNLEDETEDDDLFETEFRQYKRTYYMTKMGVDIVSD--DFLADQAACYVQAIQ 464
Query: 470 WVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSH 529
W++HYYY GV SW W+YPYHYAPF SD++++ I FELG PFKPF QLL V P+AS +
Sbjct: 465 WILHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLRIHFELGKPFKPFEQLLAVLPAASKN 524
Query: 530 ALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHT 589
LP Y+ LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+
Sbjct: 525 LLPTCYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHS 584
Query: 590 LTEEEARRN 598
L +EE +RN
Sbjct: 585 LKKEERKRN 593
>gi|383419335|gb|AFH32881.1| 5'-3' exoribonuclease 1 isoform b [Macaca mulatta]
Length = 1694
Score = 219 bits (557), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 171/300 (57%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 172 bits (436), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 115/189 (60%), Gaps = 3/189 (1%)
Query: 410 ELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLC 469
E++ K D + ++D + +K YY K + + D Y + +
Sbjct: 408 EMVTSK-DNLEDETEDDDLFETEFRQYKRTYYMTKMGVDIVSD--DFLADQAACYVQAIQ 464
Query: 470 WVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSH 529
W++HYYY GV SW W+YPYHYAPF SD++++ I FELG PFKPF QLL V P+AS +
Sbjct: 465 WILHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLRIHFELGKPFKPFEQLLAVLPAASKN 524
Query: 530 ALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHT 589
LP Y+ LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+
Sbjct: 525 LLPTCYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHS 584
Query: 590 LTEEEARRN 598
L +EE +RN
Sbjct: 585 LKKEERKRN 593
>gi|114589588|ref|XP_001161640.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Pan troglodytes]
Length = 1705
Score = 219 bits (557), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 171/300 (57%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAVEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 172 bits (436), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 115/189 (60%), Gaps = 3/189 (1%)
Query: 410 ELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLC 469
E++ K D + ++D + +K YY K + + D Y + +
Sbjct: 408 EMITSK-DNLEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQ 464
Query: 470 WVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSH 529
W++HYYY GV SW W+YPYHYAPF SD+ ++ I FELG PFKPF QLL V P+AS +
Sbjct: 465 WILHYYYHGVQSWSWYYPYHYAPFLSDIHNISTLKIHFELGKPFKPFEQLLAVLPAASKN 524
Query: 530 ALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHT 589
LP Y+ LMT+ +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+
Sbjct: 525 LLPACYQHLMTNEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHS 584
Query: 590 LTEEEARRN 598
L +EE +RN
Sbjct: 585 LKKEERKRN 593
>gi|383419337|gb|AFH32882.1| 5'-3' exoribonuclease 1 isoform a [Macaca mulatta]
Length = 1707
Score = 219 bits (557), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 171/300 (57%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 172 bits (436), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 115/189 (60%), Gaps = 3/189 (1%)
Query: 410 ELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLC 469
E++ K D + ++D + +K YY K + + D Y + +
Sbjct: 408 EMVTSK-DNLEDETEDDDLFETEFRQYKRTYYMTKMGVDIVSD--DFLADQAACYVQAIQ 464
Query: 470 WVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSH 529
W++HYYY GV SW W+YPYHYAPF SD++++ I FELG PFKPF QLL V P+AS +
Sbjct: 465 WILHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLRIHFELGKPFKPFEQLLAVLPAASKN 524
Query: 530 ALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHT 589
LP Y+ LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+
Sbjct: 525 LLPTCYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHS 584
Query: 590 LTEEEARRN 598
L +EE +RN
Sbjct: 585 LKKEERKRN 593
>gi|297286724|ref|XP_001112265.2| PREDICTED: 5'-3' exoribonuclease 1-like isoform 1 [Macaca mulatta]
Length = 1693
Score = 219 bits (557), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 171/300 (57%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 172 bits (436), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 115/189 (60%), Gaps = 3/189 (1%)
Query: 410 ELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLC 469
E++ K D + ++D + +K YY K + + D Y + +
Sbjct: 408 EMVTSK-DNLEDETEDDDLFETEFRQYKRTYYMTKMGVDIVSD--DFLADQAACYVQAIQ 464
Query: 470 WVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSH 529
W++HYYY GV SW W+YPYHYAPF SD++++ I FELG PFKPF QLL V P+AS +
Sbjct: 465 WILHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLRIHFELGKPFKPFEQLLAVLPAASKN 524
Query: 530 ALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHT 589
LP Y+ LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+
Sbjct: 525 LLPTCYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHS 584
Query: 590 LTEEEARRN 598
L +EE +RN
Sbjct: 585 LKKEERKRN 593
>gi|109048976|ref|XP_001112305.1| PREDICTED: 5'-3' exoribonuclease 1-like isoform 2 [Macaca mulatta]
gi|355747003|gb|EHH51617.1| hypothetical protein EGM_11029 [Macaca fascicularis]
Length = 1706
Score = 219 bits (557), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 171/300 (57%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 172 bits (436), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 115/189 (60%), Gaps = 3/189 (1%)
Query: 410 ELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLC 469
E++ K D + ++D + +K YY K + + D Y + +
Sbjct: 408 EMVTSK-DNLEDETEDDDLFETEFRQYKRTYYMTKMGVDIVSD--DFLADQAACYVQAIQ 464
Query: 470 WVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSH 529
W++HYYY GV SW W+YPYHYAPF SD++++ I FELG PFKPF QLL V P+AS +
Sbjct: 465 WILHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLRIHFELGKPFKPFEQLLAVLPAASKN 524
Query: 530 ALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHT 589
LP Y+ LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+
Sbjct: 525 LLPTCYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHS 584
Query: 590 LTEEEARRN 598
L +EE +RN
Sbjct: 585 LKKEERKRN 593
>gi|344288974|ref|XP_003416221.1| PREDICTED: LOW QUALITY PROTEIN: 5'-3' exoribonuclease 1-like
[Loxodonta africana]
Length = 1706
Score = 219 bits (557), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 171/300 (57%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSVLKDKIAFKYDIERIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYVHILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 173 bits (438), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 119/194 (61%), Gaps = 8/194 (4%)
Query: 411 LLRDKSDAFNSDNPEEDKVK---LGEP---GWKERYYEEKFNAKTPEEREETRKDVVLRY 464
L +++SD S + ED+ + L E +K YY K + + D Y
Sbjct: 401 LDKNESDTATSKDNLEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSD--DFLADQAACY 458
Query: 465 TEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFP 524
+ + W++HYYY GV SW W+YPYHYAPF SD++++ I FELG PFKPF QLL V P
Sbjct: 459 VQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLP 518
Query: 525 SASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVK 584
+AS + LP Y+ LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++
Sbjct: 519 AASKNLLPTCYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAME 578
Query: 585 KIEHTLTEEEARRN 598
H+L +EE +RN
Sbjct: 579 SCNHSLKKEERKRN 592
>gi|119599379|gb|EAW78973.1| 5'-3' exoribonuclease 1, isoform CRA_c [Homo sapiens]
Length = 1693
Score = 219 bits (557), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 171/300 (57%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 168 bits (425), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 115/189 (60%), Gaps = 4/189 (2%)
Query: 410 ELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLC 469
E++ K D + ++D + +K YY K + + D Y + +
Sbjct: 408 EMITSK-DNLEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQ 464
Query: 470 WVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSH 529
W++HYYY GV SW W+YPYHYAPF SD+ ++ I FELG PFKPF QLL V P+AS +
Sbjct: 465 WILHYYYHGVQSWSWYYPYHYAPFLSDIHNISTLKIHFELGKPFKPFEQLLAVLPAASKN 524
Query: 530 ALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHT 589
LP Y+ LMT+ +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+
Sbjct: 525 LLPACYQHLMTNEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDE-RLLEAMETCNHS 583
Query: 590 LTEEEARRN 598
L +EE +RN
Sbjct: 584 LKKEERKRN 592
>gi|110624787|ref|NP_001036069.1| 5'-3' exoribonuclease 1 isoform b [Homo sapiens]
Length = 1693
Score = 219 bits (557), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 171/300 (57%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 172 bits (437), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 115/189 (60%), Gaps = 3/189 (1%)
Query: 410 ELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLC 469
E++ K D + ++D + +K YY K + + D Y + +
Sbjct: 408 EMITSK-DNLEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQ 464
Query: 470 WVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSH 529
W++HYYY GV SW W+YPYHYAPF SD+ ++ I FELG PFKPF QLL V P+AS +
Sbjct: 465 WILHYYYHGVQSWSWYYPYHYAPFLSDIHNISTLKIHFELGKPFKPFEQLLAVLPAASKN 524
Query: 530 ALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHT 589
LP Y+ LMT+ +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+
Sbjct: 525 LLPACYQHLMTNEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHS 584
Query: 590 LTEEEARRN 598
L +EE +RN
Sbjct: 585 LKKEERKRN 593
>gi|402861336|ref|XP_003895053.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Papio anubis]
Length = 1694
Score = 219 bits (557), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 171/300 (57%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 172 bits (436), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 115/189 (60%), Gaps = 3/189 (1%)
Query: 410 ELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLC 469
E++ K D + ++D + +K YY K + + D Y + +
Sbjct: 408 EMVTSK-DNLEDETEDDDLFETEFRQYKRTYYMTKMGVDIVSD--DFLADQAACYVQAIQ 464
Query: 470 WVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSH 529
W++HYYY GV SW W+YPYHYAPF SD++++ I FELG PFKPF QLL V P+AS +
Sbjct: 465 WILHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLRIHFELGKPFKPFEQLLAVLPAASKN 524
Query: 530 ALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHT 589
LP Y+ LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+
Sbjct: 525 LLPTCYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHS 584
Query: 590 LTEEEARRN 598
L +EE +RN
Sbjct: 585 LKKEERKRN 593
>gi|380813906|gb|AFE78827.1| 5'-3' exoribonuclease 1 isoform b [Macaca mulatta]
Length = 1694
Score = 219 bits (557), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 171/300 (57%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRYGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 172 bits (436), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 115/189 (60%), Gaps = 3/189 (1%)
Query: 410 ELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLC 469
E++ K D + ++D + +K YY K + + D Y + +
Sbjct: 408 EMVTSK-DNLEDETEDDDLFETEFRQYKRTYYMTKMGVDIVSD--DFLADQAACYVQAIQ 464
Query: 470 WVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSH 529
W++HYYY GV SW W+YPYHYAPF SD++++ I FELG PFKPF QLL V P+AS +
Sbjct: 465 WILHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLRIHFELGKPFKPFEQLLAVLPAASKN 524
Query: 530 ALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHT 589
LP Y+ LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+
Sbjct: 525 LLPTCYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHS 584
Query: 590 LTEEEARRN 598
L +EE +RN
Sbjct: 585 LKKEERKRN 593
>gi|50949885|emb|CAH10490.1| hypothetical protein [Homo sapiens]
gi|119599378|gb|EAW78972.1| 5'-3' exoribonuclease 1, isoform CRA_b [Homo sapiens]
Length = 1694
Score = 219 bits (557), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 171/300 (57%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 172 bits (436), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 115/189 (60%), Gaps = 3/189 (1%)
Query: 410 ELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLC 469
E++ K D + ++D + +K YY K + + D Y + +
Sbjct: 408 EMITSK-DNLEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQ 464
Query: 470 WVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSH 529
W++HYYY GV SW W+YPYHYAPF SD+ ++ I FELG PFKPF QLL V P+AS +
Sbjct: 465 WILHYYYHGVQSWSWYYPYHYAPFLSDIHNISTLKIHFELGKPFKPFEQLLAVLPAASKN 524
Query: 530 ALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHT 589
LP Y+ LMT+ +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+
Sbjct: 525 LLPACYQHLMTNEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHS 584
Query: 590 LTEEEARRN 598
L +EE +RN
Sbjct: 585 LKKEERKRN 593
>gi|410971335|ref|XP_003992125.1| PREDICTED: 5'-3' exoribonuclease 1 [Felis catus]
Length = 1672
Score = 219 bits (557), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 118/298 (39%), Positives = 170/298 (57%), Gaps = 43/298 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKALEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSVLKDKITFKYDIERIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 295
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F
Sbjct: 294 IPHLPHLHINHDALPLLYGTYITILPELGGYINENGHLNLPRFEKYLVKLSDFDREHF 351
Score = 139 bits (350), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 59/114 (51%), Positives = 82/114 (71%)
Query: 485 FYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNS 544
+YPYHYAPF SD++++ I FELG PFKPF QLL V P+AS + LP Y+ LMT +S
Sbjct: 420 YYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTSEDS 479
Query: 545 PISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
PI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +RN
Sbjct: 480 PIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 533
>gi|397512468|ref|XP_003826567.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Pan paniscus]
Length = 1705
Score = 219 bits (557), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 171/300 (57%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAVEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 172 bits (436), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 115/189 (60%), Gaps = 3/189 (1%)
Query: 410 ELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLC 469
E++ K D + ++D + +K YY K + + D Y + +
Sbjct: 408 EMITSK-DNLEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQ 464
Query: 470 WVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSH 529
W++HYYY GV SW W+YPYHYAPF SD+ ++ I FELG PFKPF QLL V P+AS +
Sbjct: 465 WILHYYYHGVQSWSWYYPYHYAPFLSDIHNISTLKIHFELGKPFKPFEQLLAVLPAASKN 524
Query: 530 ALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHT 589
LP Y+ LMT+ +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+
Sbjct: 525 LLPACYQHLMTNEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHS 584
Query: 590 LTEEEARRN 598
L +EE +RN
Sbjct: 585 LKKEERKRN 593
>gi|397512470|ref|XP_003826568.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Pan paniscus]
Length = 1693
Score = 219 bits (557), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 171/300 (57%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAVEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 172 bits (436), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 115/189 (60%), Gaps = 3/189 (1%)
Query: 410 ELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLC 469
E++ K D + ++D + +K YY K + + D Y + +
Sbjct: 408 EMITSK-DNLEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQ 464
Query: 470 WVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSH 529
W++HYYY GV SW W+YPYHYAPF SD+ ++ I FELG PFKPF QLL V P+AS +
Sbjct: 465 WILHYYYHGVQSWSWYYPYHYAPFLSDIHNISTLKIHFELGKPFKPFEQLLAVLPAASKN 524
Query: 530 ALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHT 589
LP Y+ LMT+ +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+
Sbjct: 525 LLPACYQHLMTNEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHS 584
Query: 590 LTEEEARRN 598
L +EE +RN
Sbjct: 585 LKKEERKRN 593
>gi|332818029|ref|XP_516791.3| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Pan troglodytes]
Length = 1692
Score = 219 bits (557), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 171/300 (57%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAVEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 172 bits (436), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 115/189 (60%), Gaps = 3/189 (1%)
Query: 410 ELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLC 469
E++ K D + ++D + +K YY K + + D Y + +
Sbjct: 408 EMITSK-DNLEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQ 464
Query: 470 WVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSH 529
W++HYYY GV SW W+YPYHYAPF SD+ ++ I FELG PFKPF QLL V P+AS +
Sbjct: 465 WILHYYYHGVQSWSWYYPYHYAPFLSDIHNISTLKIHFELGKPFKPFEQLLAVLPAASKN 524
Query: 530 ALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHT 589
LP Y+ LMT+ +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+
Sbjct: 525 LLPACYQHLMTNEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHS 584
Query: 590 LTEEEARRN 598
L +EE +RN
Sbjct: 585 LKKEERKRN 593
>gi|410341471|gb|JAA39682.1| 5'-3' exoribonuclease 1 [Pan troglodytes]
Length = 1693
Score = 219 bits (557), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 171/300 (57%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAVEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 172 bits (436), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 115/189 (60%), Gaps = 3/189 (1%)
Query: 410 ELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLC 469
E++ K D + ++D + +K YY K + + D Y + +
Sbjct: 408 EMITSK-DNLEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQ 464
Query: 470 WVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSH 529
W++HYYY GV SW W+YPYHYAPF SD+ ++ I FELG PFKPF QLL V P+AS +
Sbjct: 465 WILHYYYHGVQSWSWYYPYHYAPFLSDIHNISTLKIHFELGKPFKPFEQLLAVLPAASKN 524
Query: 530 ALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHT 589
LP Y+ LMT+ +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+
Sbjct: 525 LLPACYQHLMTNEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHS 584
Query: 590 LTEEEARRN 598
L +EE +RN
Sbjct: 585 LKKEERKRN 593
>gi|410266384|gb|JAA21158.1| 5'-3' exoribonuclease 1 [Pan troglodytes]
Length = 1693
Score = 219 bits (557), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 171/300 (57%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAVEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 172 bits (436), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 115/189 (60%), Gaps = 3/189 (1%)
Query: 410 ELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLC 469
E++ K D + ++D + +K YY K + + D Y + +
Sbjct: 408 EMITSK-DNLEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQ 464
Query: 470 WVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSH 529
W++HYYY GV SW W+YPYHYAPF SD+ ++ I FELG PFKPF QLL V P+AS +
Sbjct: 465 WILHYYYHGVQSWSWYYPYHYAPFLSDIHNISTLKIHFELGKPFKPFEQLLAVLPAASKN 524
Query: 530 ALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHT 589
LP Y+ LMT+ +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+
Sbjct: 525 LLPACYQHLMTNEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHS 584
Query: 590 LTEEEARRN 598
L +EE +RN
Sbjct: 585 LKKEERKRN 593
>gi|296227918|ref|XP_002759572.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Callithrix jacchus]
Length = 1694
Score = 219 bits (557), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 120/300 (40%), Positives = 174/300 (58%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISMDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+ KA+R
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK-------------------KAQR------- 237
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
V P++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF
Sbjct: 238 ----VCAPEETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 173 bits (438), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 115/189 (60%), Gaps = 3/189 (1%)
Query: 410 ELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLC 469
E++ K D + ++D + +K YY K + + D Y + +
Sbjct: 408 EMVTSK-DNLEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSD--DFLADQATCYVQAIQ 464
Query: 470 WVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSH 529
W++HYYY GV SW W+YPYHYAPF SD++++ I FELG PFKPF QLL V P+AS +
Sbjct: 465 WILHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLRIHFELGKPFKPFEQLLAVLPAASKN 524
Query: 530 ALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHT 589
LP Y+ LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+
Sbjct: 525 LLPTCYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHS 584
Query: 590 LTEEEARRN 598
L +EE +RN
Sbjct: 585 LKKEERKRN 593
>gi|296227920|ref|XP_002759573.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Callithrix jacchus]
Length = 1706
Score = 219 bits (557), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 120/300 (40%), Positives = 174/300 (58%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISMDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+ KA+R
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK-------------------KAQR------- 237
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
V P++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF
Sbjct: 238 ----VCAPEETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 172 bits (437), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 115/189 (60%), Gaps = 3/189 (1%)
Query: 410 ELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLC 469
E++ K D + ++D + +K YY K + + D Y + +
Sbjct: 408 EMVTSK-DNLEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSD--DFLADQATCYVQAIQ 464
Query: 470 WVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSH 529
W++HYYY GV SW W+YPYHYAPF SD++++ I FELG PFKPF QLL V P+AS +
Sbjct: 465 WILHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLRIHFELGKPFKPFEQLLAVLPAASKN 524
Query: 530 ALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHT 589
LP Y+ LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+
Sbjct: 525 LLPTCYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHS 584
Query: 590 LTEEEARRN 598
L +EE +RN
Sbjct: 585 LKKEERKRN 593
>gi|338714846|ref|XP_001917535.2| PREDICTED: 5'-3' exoribonuclease 1 [Equus caballus]
Length = 1726
Score = 218 bits (556), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 171/300 (57%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSVLKDKIAFKYDIERIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 171 bits (432), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 106/163 (65%), Gaps = 2/163 (1%)
Query: 436 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 495
+K YY K + + D Y + + W++HYYY GV SW W+YPYHYAPF S
Sbjct: 433 YKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLS 490
Query: 496 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 555
D++++ +I FELG PFKPF QLL V P+AS + LP Y+ LMT +SPI ++YP DF+
Sbjct: 491 DIRNISALSIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTSEDSPIIEYYPPDFK 550
Query: 556 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
D+NGK+ W+ + +PFIDE RLL+ ++ ++L +EE +RN
Sbjct: 551 TDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNYSLKKEERKRN 593
>gi|329664920|ref|NP_001192964.1| 5'-3' exoribonuclease 1 [Bos taurus]
gi|296491012|tpg|DAA33110.1| TPA: 5'-3' exoribonuclease 1 isoform 2 [Bos taurus]
Length = 1703
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 119/300 (39%), Positives = 170/300 (56%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A EE++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EEKIKKAIEK-GETLPAEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSALKDKITFKYDIERIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 174 bits (440), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 76/163 (46%), Positives = 105/163 (64%), Gaps = 2/163 (1%)
Query: 436 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 495
+K YY K + + D Y + + W++HYYY GV SW WFYPYHYAPF S
Sbjct: 433 YKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQWILHYYYHGVQSWSWFYPYHYAPFLS 490
Query: 496 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 555
D++++ I FELG PFKPF QLL V P+AS + LP Y+ LMT +SPI ++YP DF+
Sbjct: 491 DIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQHLMTSDDSPIIEYYPPDFK 550
Query: 556 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +RN
Sbjct: 551 TDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 593
>gi|300120088|emb|CBK19642.2| unnamed protein product [Blastocystis hominis]
Length = 574
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 121/322 (37%), Positives = 188/322 (58%), Gaps = 13/322 (4%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQV---FDSNVITPGTEFM 57
+ +QR RRFR+ ++ + EE+L++E EG + PP + + F+S I PGT+FM
Sbjct: 114 VKEQRGRRFRSGYESVEIKQLEEQLKKEMIAEGFQFPPDVEEEEEESFNSLNIFPGTDFM 173
Query: 58 AVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRH 117
+ L + L YY+ L ++ + + V++SD++VPGEGEHKIM ++R QR P Y PN H
Sbjct: 174 SELQVFLDYYVTKTLQSNEKLQNLNVLISDSDVPGEGEHKIMEFIRSQRTQPDYLPNQTH 233
Query: 118 CLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGE 177
++GLDADL MLAL++HE F IL E +F +C +CG P H C ++K G
Sbjct: 234 IIHGLDADLSMLALSSHEPLFYILVEQLFI----TRCAICGAPDHSTRECVKLPRKKLGA 289
Query: 178 FDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEI--DLECIVDDFIFMCFFVGN 235
K D+ +P Q + I TLR+YLD E R +I +LE I+DD++F+C FVGN
Sbjct: 290 -STKDDKFY--HRPLQVISIKTLRDYLDLEMRPVASQMKIPYNLERIIDDYVFLCIFVGN 346
Query: 236 DFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTD-GSKPSLRRVEHFIQAVGSYEDRI 294
DFLP +P +IREGA+ +L+ +Y++ Y+ G + + +V+ ++ V + E I
Sbjct: 347 DFLPSLPLFDIREGAVTMLLNLYRRLLPTWTDYIIRPGGEINYLQVQSLMREVYANEGNI 406
Query: 295 FQKRARLHQRHAERIKREKAQA 316
+++ + R+KR QA
Sbjct: 407 LRRKRLFGRYTVGRLKRPAVQA 428
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 425 EEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQW 484
+E+ V G+PGW + YY +KF P +R + V Y GL W+M YY G SW W
Sbjct: 438 DEESVDYGKPGWSDAYYRQKFGLD-PSDRVSIER-VCQEYMLGLAWIMRYYCTGCASWDW 495
Query: 485 FYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGV 522
FYP HYAP DL ++ +SF LG P ++ V
Sbjct: 496 FYPEHYAPLLRDLSAMNNVTVSFSLGQPISKLEAVIAV 533
>gi|440911813|gb|ELR61446.1| 5'-3' exoribonuclease 1 [Bos grunniens mutus]
Length = 1727
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 119/300 (39%), Positives = 170/300 (56%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A EE++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EEKIKKAIEK-GETLPAEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSALKDKITFKYDIERIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 174 bits (440), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 76/163 (46%), Positives = 105/163 (64%), Gaps = 2/163 (1%)
Query: 436 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 495
+K YY K + + D Y + + W++HYYY GV SW WFYPYHYAPF S
Sbjct: 433 YKRTYYMTKMGVDIVSD--DFLADQAACYVQAIQWILHYYYHGVQSWSWFYPYHYAPFLS 490
Query: 496 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 555
D++++ I FELG PFKPF QLL V P+AS + LP Y+ LMT +SPI ++YP DF+
Sbjct: 491 DIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQHLMTSDDSPIIEYYPPDFK 550
Query: 556 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +RN
Sbjct: 551 TDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 593
>gi|293349379|ref|XP_001069029.2| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Rattus norvegicus]
gi|293361286|ref|XP_217233.5| PREDICTED: 5'-3' exoribonuclease 1 isoform 3 [Rattus norvegicus]
Length = 1723
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 170/300 (56%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSALKEKITFKYDIEKIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYIAILPELGGYINESGHLNLPRFERYLVKLSDFDREHFSE 353
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 80/182 (43%), Positives = 111/182 (60%), Gaps = 2/182 (1%)
Query: 417 DAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYY 476
D F + ++D + +K YY K + E D Y + + W++HYYY
Sbjct: 414 DNFEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSD--EFLADQAACYVQAIQWILHYYY 471
Query: 477 EGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYR 536
GV SW W+YPYHYAPF SD++++ I FELG PFKPF QLL V PSAS LP Y+
Sbjct: 472 HGVQSWSWYYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPSASKTLLPTCYQ 531
Query: 537 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 596
LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +
Sbjct: 532 HLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERK 591
Query: 597 RN 598
RN
Sbjct: 592 RN 593
>gi|293349383|ref|XP_002727167.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 3 [Rattus norvegicus]
gi|293361290|ref|XP_002730003.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Rattus norvegicus]
gi|149018866|gb|EDL77507.1| rCG25308 [Rattus norvegicus]
Length = 1685
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 170/300 (56%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSALKEKITFKYDIEKIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYIAILPELGGYINESGHLNLPRFERYLVKLSDFDREHFSE 353
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 80/182 (43%), Positives = 111/182 (60%), Gaps = 2/182 (1%)
Query: 417 DAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYY 476
D F + ++D + +K YY K + E D Y + + W++HYYY
Sbjct: 414 DNFEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSD--EFLADQAACYVQAIQWILHYYY 471
Query: 477 EGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYR 536
GV SW W+YPYHYAPF SD++++ I FELG PFKPF QLL V PSAS LP Y+
Sbjct: 472 HGVQSWSWYYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPSASKTLLPTCYQ 531
Query: 537 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 596
LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +
Sbjct: 532 HLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERK 591
Query: 597 RN 598
RN
Sbjct: 592 RN 593
>gi|297672153|ref|XP_002814174.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Pongo abelii]
Length = 1706
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 171/300 (57%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSLLKEKITFKYDIERIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 174 bits (440), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 106/163 (65%), Gaps = 2/163 (1%)
Query: 436 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 495
+K YY K + + D Y + + W++HYYY GV SW W+YPYHYAPF S
Sbjct: 433 YKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLS 490
Query: 496 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 555
D++++ I FELG PFKPF QLL V P+AS + LP Y+ LMT+ +SPI ++YP DF+
Sbjct: 491 DIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTNEDSPIIEYYPLDFK 550
Query: 556 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +RN
Sbjct: 551 TDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 593
>gi|259480959|tpe|CBF74062.1| TPA: exonuclease II (Eurofung) [Aspergillus nidulans FGSC A4]
Length = 1398
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 136/339 (40%), Positives = 190/339 (56%), Gaps = 52/339 (15%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA A+E+ + Q E PK D FDSN ITPGTEFMA L
Sbjct: 94 MNQQRARRFRTALDA--EQAKEKAIAQGIEM------PKEDP--FDSNCITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+I +++ D W+ ++++LS VPGEGEHKIM Y+R + PGYDPN RHCLY
Sbjct: 144 TEQLKYFISKKISEDKDWQGVEIVLSGHEVPGEGEHKIMEYIRHAKAQPGYDPNVRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+Q ++K E +
Sbjct: 204 GLDADLIMLGLLSHDPHFCLLREEV-TFGRQ-------------------VQKKPKELEH 243
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFR------IPNPPFEIDLECIVDDFIFMCFFVG 234
+ + LH+ +REYL EF+ I + P+E E ++DDFI M FFVG
Sbjct: 244 QN---------FYLLHLCMVREYLQLEFQELEEEGIIDFPYE--FERVIDDFILMAFFVG 292
Query: 235 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI 294
NDFLP++P L I EGA++L+ VYK+ +GGY+ + +L+R+ + A+ E R
Sbjct: 293 NDFLPNLPNLHINEGALSLMFKVYKEVLPKMGGYINEQGTINLQRLGVLLDALSHVEYRF 352
Query: 295 FQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVP 333
F+ + R K A G DV+ + ++ P
Sbjct: 353 FEA-----EYSDATWMRAKQSADNGADVDAKPKTFTVTP 386
Score = 180 bits (457), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 110/172 (63%), Gaps = 2/172 (1%)
Query: 436 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 495
WK++YY EKF + EE RK + Y +GL WV+ YYY G+ SW WF+ HYAP S
Sbjct: 508 WKDKYYMEKFGWGL-DNHEEMRK-LTENYVQGLQWVLFYYYRGIASWPWFFNSHYAPMIS 565
Query: 496 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 555
D+K +++F LG PF+P++QL+GV P S +P+ Y LM+ P+SPI DFYP DFE
Sbjct: 566 DVKKGLNADMNFRLGRPFRPYDQLMGVLPDRSKKIVPKAYHDLMSSPDSPIIDFYPRDFE 625
Query: 556 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
+DMNGK+ W+ + K+PFIDE RLLD + EH LT EE RN + F
Sbjct: 626 LDMNGKKMEWEAVVKIPFIDERRLLDALATREHLLTPEEKARNGFGVSLKFT 677
>gi|67902396|ref|XP_681454.1| hypothetical protein AN8185.2 [Aspergillus nidulans FGSC A4]
gi|40740017|gb|EAA59207.1| hypothetical protein AN8185.2 [Aspergillus nidulans FGSC A4]
Length = 1699
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 136/339 (40%), Positives = 190/339 (56%), Gaps = 52/339 (15%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA A+E+ + Q E PK D FDSN ITPGTEFMA L
Sbjct: 94 MNQQRARRFRTALDA--EQAKEKAIAQGIEM------PKEDP--FDSNCITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+I +++ D W+ ++++LS VPGEGEHKIM Y+R + PGYDPN RHCLY
Sbjct: 144 TEQLKYFISKKISEDKDWQGVEIVLSGHEVPGEGEHKIMEYIRHAKAQPGYDPNVRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+Q ++K E +
Sbjct: 204 GLDADLIMLGLLSHDPHFCLLREEV-TFGRQ-------------------VQKKPKELEH 243
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFR------IPNPPFEIDLECIVDDFIFMCFFVG 234
+ + LH+ +REYL EF+ I + P+E E ++DDFI M FFVG
Sbjct: 244 QN---------FYLLHLCMVREYLQLEFQELEEEGIIDFPYE--FERVIDDFILMAFFVG 292
Query: 235 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI 294
NDFLP++P L I EGA++L+ VYK+ +GGY+ + +L+R+ + A+ E R
Sbjct: 293 NDFLPNLPNLHINEGALSLMFKVYKEVLPKMGGYINEQGTINLQRLGVLLDALSHVEYRF 352
Query: 295 FQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVP 333
F+ + R K A G DV+ + ++ P
Sbjct: 353 FEA-----EYSDATWMRAKQSADNGADVDAKPKTFTVTP 386
Score = 180 bits (457), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 110/172 (63%), Gaps = 2/172 (1%)
Query: 436 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 495
WK++YY EKF + EE RK + Y +GL WV+ YYY G+ SW WF+ HYAP S
Sbjct: 508 WKDKYYMEKFGWGL-DNHEEMRK-LTENYVQGLQWVLFYYYRGIASWPWFFNSHYAPMIS 565
Query: 496 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 555
D+K +++F LG PF+P++QL+GV P S +P+ Y LM+ P+SPI DFYP DFE
Sbjct: 566 DVKKGLNADMNFRLGRPFRPYDQLMGVLPDRSKKIVPKAYHDLMSSPDSPIIDFYPRDFE 625
Query: 556 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
+DMNGK+ W+ + K+PFIDE RLLD + EH LT EE RN + F
Sbjct: 626 LDMNGKKMEWEAVVKIPFIDERRLLDALATREHLLTPEEKARNGFGVSLKFT 677
>gi|332232374|ref|XP_003265381.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Nomascus leucogenys]
Length = 1706
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 171/300 (57%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 172 bits (435), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 114/189 (60%), Gaps = 3/189 (1%)
Query: 410 ELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLC 469
E++ K D + ++D + +K YY K + + D Y + +
Sbjct: 408 EMVTSK-DNLEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQ 464
Query: 470 WVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSH 529
W++HYYY GV SW W+YPYHYAPF SD++++ I FELG PFKPF QLL V P+AS +
Sbjct: 465 WILHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKN 524
Query: 530 ALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHT 589
LP Y+ LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+
Sbjct: 525 LLPTCYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHS 584
Query: 590 LTEEEARRN 598
L EE +RN
Sbjct: 585 LKREERKRN 593
>gi|293349381|ref|XP_002727166.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Rattus norvegicus]
gi|293361288|ref|XP_002730002.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Rattus norvegicus]
Length = 1686
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 170/300 (56%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSALKEKITFKYDIEKIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYIAILPELGGYINESGHLNLPRFERYLVKLSDFDREHFSE 353
Score = 177 bits (449), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 80/182 (43%), Positives = 111/182 (60%), Gaps = 2/182 (1%)
Query: 417 DAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYY 476
D F + ++D + +K YY K + E D Y + + W++HYYY
Sbjct: 414 DNFEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSD--EFLADQAACYVQAIQWILHYYY 471
Query: 477 EGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYR 536
GV SW W+YPYHYAPF SD++++ I FELG PFKPF QLL V PSAS LP Y+
Sbjct: 472 HGVQSWSWYYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPSASKTLLPTCYQ 531
Query: 537 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 596
LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +
Sbjct: 532 HLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERK 591
Query: 597 RN 598
RN
Sbjct: 592 RN 593
>gi|297672155|ref|XP_002814175.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Pongo abelii]
Length = 1693
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 171/300 (57%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSLLKEKITFKYDIERIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 174 bits (440), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 106/163 (65%), Gaps = 2/163 (1%)
Query: 436 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 495
+K YY K + + D Y + + W++HYYY GV SW W+YPYHYAPF S
Sbjct: 433 YKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLS 490
Query: 496 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 555
D++++ I FELG PFKPF QLL V P+AS + LP Y+ LMT+ +SPI ++YP DF+
Sbjct: 491 DIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTNEDSPIIEYYPLDFK 550
Query: 556 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +RN
Sbjct: 551 TDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 593
>gi|332232376|ref|XP_003265382.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Nomascus leucogenys]
Length = 1693
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 171/300 (57%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 172 bits (435), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 114/189 (60%), Gaps = 3/189 (1%)
Query: 410 ELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLC 469
E++ K D + ++D + +K YY K + + D Y + +
Sbjct: 408 EMVTSK-DNLEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQ 464
Query: 470 WVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSH 529
W++HYYY GV SW W+YPYHYAPF SD++++ I FELG PFKPF QLL V P+AS +
Sbjct: 465 WILHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKN 524
Query: 530 ALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHT 589
LP Y+ LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+
Sbjct: 525 LLPTCYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHS 584
Query: 590 LTEEEARRN 598
L EE +RN
Sbjct: 585 LKREERKRN 593
>gi|392342051|ref|XP_003754494.1| PREDICTED: 5'-3' exoribonuclease 1 [Rattus norvegicus]
gi|392350274|ref|XP_003750610.1| PREDICTED: 5'-3' exoribonuclease 1 [Rattus norvegicus]
Length = 1706
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 170/300 (56%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSALKEKITFKYDIEKIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYIAILPELGGYINESGHLNLPRFERYLVKLSDFDREHFSE 353
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 80/182 (43%), Positives = 111/182 (60%), Gaps = 2/182 (1%)
Query: 417 DAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYY 476
D F + ++D + +K YY K + E D Y + + W++HYYY
Sbjct: 414 DNFEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSD--EFLADQAACYVQAIQWILHYYY 471
Query: 477 EGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYR 536
GV SW W+YPYHYAPF SD++++ I FELG PFKPF QLL V PSAS LP Y+
Sbjct: 472 HGVQSWSWYYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPSASKTLLPTCYQ 531
Query: 537 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 596
LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +
Sbjct: 532 HLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERK 591
Query: 597 RN 598
RN
Sbjct: 592 RN 593
>gi|296491011|tpg|DAA33109.1| TPA: 5'-3' exoribonuclease 1 isoform 1 [Bos taurus]
Length = 1690
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 119/300 (39%), Positives = 170/300 (56%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A EE++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EEKIKKAIEK-GETLPAEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSALKDKITFKYDIERIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 174 bits (440), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 76/163 (46%), Positives = 105/163 (64%), Gaps = 2/163 (1%)
Query: 436 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 495
+K YY K + + D Y + + W++HYYY GV SW WFYPYHYAPF S
Sbjct: 433 YKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQWILHYYYHGVQSWSWFYPYHYAPFLS 490
Query: 496 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 555
D++++ I FELG PFKPF QLL V P+AS + LP Y+ LMT +SPI ++YP DF+
Sbjct: 491 DIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQHLMTSDDSPIIEYYPPDFK 550
Query: 556 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +RN
Sbjct: 551 TDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 593
>gi|51476722|emb|CAH18332.1| hypothetical protein [Homo sapiens]
Length = 1694
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 170/300 (56%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++ + E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIEKAIEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLEYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 172 bits (436), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 115/189 (60%), Gaps = 3/189 (1%)
Query: 410 ELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLC 469
E++ K D + ++D + +K YY K + + D Y + +
Sbjct: 408 EMITSK-DNLEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQ 464
Query: 470 WVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSH 529
W++HYYY GV SW W+YPYHYAPF SD+ ++ I FELG PFKPF QLL V P+AS +
Sbjct: 465 WILHYYYHGVQSWSWYYPYHYAPFLSDIHNISTLKIHFELGKPFKPFEQLLAVLPAASKN 524
Query: 530 ALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHT 589
LP Y+ LMT+ +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+
Sbjct: 525 LLPACYQHLMTNEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHS 584
Query: 590 LTEEEARRN 598
L +EE +RN
Sbjct: 585 LKKEERKRN 593
>gi|2281015|dbj|BAA21563.1| Dhm2 protein [Mus musculus]
Length = 1687
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 171/300 (57%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRARRFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSALKEKITFKYDIEKIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYIAILPELGGYINESGHLNLPRFERYLVKLSDFDREHFSE 353
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 79/182 (43%), Positives = 111/182 (60%), Gaps = 2/182 (1%)
Query: 417 DAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYY 476
D F + ++D + +K YY K + E + Y + + W++HYYY
Sbjct: 414 DNFEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSD--EFLANQAACYVQAIQWILHYYY 471
Query: 477 EGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYR 536
GV SW W+YPYHYAPF SD++ + I FELG PFKPF QLL V PSAS + LP Y+
Sbjct: 472 HGVQSWSWYYPYHYAPFLSDIRSISTLKIHFELGKPFKPFEQLLAVLPSASKNLLPTCYQ 531
Query: 537 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 596
LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +
Sbjct: 532 HLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDETRLLEAMETCNHSLKKEERK 591
Query: 597 RN 598
RN
Sbjct: 592 RN 593
>gi|449689746|ref|XP_004212130.1| PREDICTED: 5'-3' exoribonuclease 1-like, partial [Hydra
magnipapillata]
Length = 512
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 128/303 (42%), Positives = 168/303 (55%), Gaps = 44/303 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR +K+ S + +R G LP K DS FDSN ITPGTEFM L
Sbjct: 68 MNQQRSRRFRTAKEVGIS------IENAIQR-GETLP-KGDS--FDSNCITPGTEFMDRL 117
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+I+ +++ DP W+ V S NVPGEGEHKIM Y+R ++ P YDPNTRHCLY
Sbjct: 118 HQQLKYFINYKISTDPLWKHCVVHFSGHNVPGEGEHKIMDYIRYCKSKPDYDPNTRHCLY 177
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L+ HE HF +LRE V F
Sbjct: 178 GLDADLIMLGLSVHEPHFCLLREEV-------------------------------RFGA 206
Query: 181 KGDEVVVP-KKPYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K + V+ P + + LH+ LREYLD EF + FE DLE I+DD+IF+ F VGNDF
Sbjct: 207 KSNIVLSPGDQVFHLLHLSLLREYLDLEFSSMKESLEFEYDLEKIIDDWIFLGFLVGNDF 266
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P + I A+ +VYK GY+ +G +L R++ F V ++ +F +
Sbjct: 267 VPHLPHMHINHDALPYFYSVYKDFLITADGYINEGGVVNLTRLKQFFGCVSDFDYELFAE 326
Query: 298 RAR 300
+
Sbjct: 327 WKK 329
Score = 96.7 bits (239), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 59/100 (59%), Gaps = 2/100 (2%)
Query: 437 KERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASD 496
K+ YY EKF E + + Y L W+ HYY+ G+ SW W+YPYHY+P+ SD
Sbjct: 415 KQNYYAEKFGMNVKNNIE--MQTICSNYVTALQWISHYYFNGLQSWSWYYPYHYSPYMSD 472
Query: 497 LKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYR 536
L + IS +LG PF+PF QLL V P+AS LP+ ++
Sbjct: 473 LASFELEKISMDLGTPFRPFEQLLAVLPAASGKLLPKAFQ 512
>gi|81861755|sp|P97789.1|XRN1_MOUSE RecName: Full=5'-3' exoribonuclease 1; Short=mXRN1; AltName:
Full=Protein Dhm2; AltName: Full=Strand-exchange protein
1 homolog
gi|1894791|emb|CAA62819.1| 5'-3' exonuclease [Mus musculus]
Length = 1719
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 170/300 (56%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSALKEKITFKYDIEKIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYIAILPELGGYINESGHLNLPRFERYLVKLSDFDREHFSE 353
Score = 176 bits (445), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 79/182 (43%), Positives = 111/182 (60%), Gaps = 2/182 (1%)
Query: 417 DAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYY 476
D F + ++D + +K YY K + E + Y + + W++HYYY
Sbjct: 414 DNFEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSD--EFLANQAACYVQAIQWILHYYY 471
Query: 477 EGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYR 536
GV SW W+YPYHYAPF SD++ + I FELG PFKPF QLL V PSAS + LP Y+
Sbjct: 472 HGVQSWSWYYPYHYAPFLSDIRSISTLKIHFELGKPFKPFEQLLAVLPSASKNLLPTCYQ 531
Query: 537 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 596
LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +
Sbjct: 532 HLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDETRLLEAMETCNHSLKKEERK 591
Query: 597 RN 598
RN
Sbjct: 592 RN 593
>gi|115495455|ref|NP_036046.2| 5'-3' exoribonuclease 1 [Mus musculus]
gi|162318350|gb|AAI56977.1| 5'-3' exoribonuclease 1 [synthetic construct]
gi|162319526|gb|AAI56134.1| 5'-3' exoribonuclease 1 [synthetic construct]
Length = 1723
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 170/300 (56%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSALKEKITFKYDIEKIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYIAILPELGGYINESGHLNLPRFERYLVKLSDFDREHFSE 353
Score = 175 bits (444), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 79/182 (43%), Positives = 111/182 (60%), Gaps = 2/182 (1%)
Query: 417 DAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYY 476
D F + ++D + +K YY K + E + Y + + W++HYYY
Sbjct: 414 DNFEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSD--EFLANQAACYVQAIQWILHYYY 471
Query: 477 EGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYR 536
GV SW W+YPYHYAPF SD++ + I FELG PFKPF QLL V PSAS + LP Y+
Sbjct: 472 HGVQSWSWYYPYHYAPFLSDIRSISTLKIHFELGKPFKPFEQLLAVLPSASKNLLPTCYQ 531
Query: 537 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 596
LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +
Sbjct: 532 HLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDETRLLEAMETCNHSLKKEERK 591
Query: 597 RN 598
RN
Sbjct: 592 RN 593
>gi|148688999|gb|EDL20946.1| 5'-3' exoribonuclease 1 [Mus musculus]
Length = 1685
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 170/300 (56%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSALKEKITFKYDIEKIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYIAILPELGGYINESGHLNLPRFERYLVKLSDFDREHFSE 353
Score = 175 bits (444), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 79/182 (43%), Positives = 111/182 (60%), Gaps = 2/182 (1%)
Query: 417 DAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYY 476
D F + ++D + +K YY K + E + Y + + W++HYYY
Sbjct: 414 DNFEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSD--EFLANQAACYVQAIQWILHYYY 471
Query: 477 EGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYR 536
GV SW W+YPYHYAPF SD++ + I FELG PFKPF QLL V PSAS + LP Y+
Sbjct: 472 HGVQSWSWYYPYHYAPFLSDIRSISTLKIHFELGKPFKPFEQLLAVLPSASKNLLPTCYQ 531
Query: 537 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 596
LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +
Sbjct: 532 HLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDETRLLEAMETCNHSLKKEERK 591
Query: 597 RN 598
RN
Sbjct: 592 RN 593
>gi|74210743|dbj|BAE25024.1| unnamed protein product [Mus musculus]
Length = 778
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 170/294 (57%), Gaps = 43/294 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S + PGEGEHKIM ++R ++ PG+DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHDTPGEGEHKIMEFIRSEKAKPGHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSALKEKITFKYDIEKIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYE 291
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++
Sbjct: 294 IPHLPHLHINHDALPLLYGTYIAILPELGGYINESGHLNLPRFERYLVKLSDFD 347
Score = 172 bits (437), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 79/182 (43%), Positives = 111/182 (60%), Gaps = 2/182 (1%)
Query: 417 DAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYY 476
D F + ++D + +K YY K + E + Y + + W++HYYY
Sbjct: 414 DNFEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSD--EFLANQAACYVQAIQWILHYYY 471
Query: 477 EGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYR 536
GV SW W+YPYHYAPF SD++ + I FELG PFKPF QLL V PSAS + LP Y+
Sbjct: 472 HGVQSWSWYYPYHYAPFLSDIRSISTLKIHFELGKPFKPFEQLLAVLPSASKNLLPTCYQ 531
Query: 537 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 596
LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +
Sbjct: 532 HLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDETRLLEAMETCNHSLKKEERK 591
Query: 597 RN 598
RN
Sbjct: 592 RN 593
>gi|1894792|emb|CAA62820.1| 5'-3' exonuclease [Mus musculus]
Length = 1706
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 170/300 (56%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSALKEKITFKYDIEKIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYIAILPELGGYINESGHLNLPRFERYLVKLSDFDREHFSE 353
Score = 175 bits (444), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 79/182 (43%), Positives = 111/182 (60%), Gaps = 2/182 (1%)
Query: 417 DAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYY 476
D F + ++D + +K YY K + E + Y + + W++HYYY
Sbjct: 414 DNFEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSD--EFLANQAACYVQAIQWILHYYY 471
Query: 477 EGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYR 536
GV SW W+YPYHYAPF SD++ + I FELG PFKPF QLL V PSAS + LP Y+
Sbjct: 472 HGVQSWSWYYPYHYAPFLSDIRSISTLKIHFELGKPFKPFEQLLAVLPSASKNLLPTCYQ 531
Query: 537 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 596
LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +
Sbjct: 532 HLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDETRLLEAMETCNHSLKKEERK 591
Query: 597 RN 598
RN
Sbjct: 592 RN 593
>gi|354466144|ref|XP_003495535.1| PREDICTED: 5'-3' exoribonuclease 1 [Cricetulus griseus]
gi|344244388|gb|EGW00492.1| 5'-3' exoribonuclease 1 [Cricetulus griseus]
Length = 1726
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 170/300 (56%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSALKEKITFKYDIEKIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYIAILPELGGYINESGHLNLPRFERYLVKLSDFDREHFSE 353
Score = 177 bits (449), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 80/182 (43%), Positives = 112/182 (61%), Gaps = 2/182 (1%)
Query: 417 DAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYY 476
D F + ++D + +K YY K + E D Y + + W++HYYY
Sbjct: 414 DNFEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSD--EFLADQAACYVQAIQWILHYYY 471
Query: 477 EGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYR 536
GV SW W+YPYHYAPF SD++++ I FELG PFKPF QLL V PSAS + LP Y+
Sbjct: 472 HGVQSWSWYYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPSASKNLLPTCYQ 531
Query: 537 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 596
LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +
Sbjct: 532 HLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERK 591
Query: 597 RN 598
RN
Sbjct: 592 RN 593
>gi|291399907|ref|XP_002716612.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Oryctolagus
cuniculus]
Length = 1702
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 170/300 (56%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAVEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSALKEKITFKYDIERIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 176 bits (445), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 118/201 (58%), Gaps = 2/201 (0%)
Query: 398 QENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETR 457
QEN + A K + D + ++D + +K YY K + +
Sbjct: 393 QENSICWAALDKNEVVTSKDNLEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSD--DFL 450
Query: 458 KDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFN 517
D Y + + W++HYYY GV SW W+YPYHYAPF SD++++ I FELG PFKPF
Sbjct: 451 ADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLKIHFELGKPFKPFE 510
Query: 518 QLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEA 577
QLL V P+AS + LP Y+ LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE
Sbjct: 511 QLLAVLPAASKNLLPACYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEK 570
Query: 578 RLLDEVKKIEHTLTEEEARRN 598
RLL+ ++ H+L +EE +RN
Sbjct: 571 RLLEAMEACNHSLKKEERKRN 591
>gi|432915339|ref|XP_004079186.1| PREDICTED: LOW QUALITY PROTEIN: 5'-3' exoribonuclease 1-like
[Oryzias latipes]
Length = 1689
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 120/300 (40%), Positives = 172/300 (57%), Gaps = 42/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ ++ G LP ++ FDSN ITPGT+FMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKALDK-GEVLPTEAR---FDSNCITPGTDFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y++H +L+ D W +KV LS PGEGEHKIM ++R + + P +DPNTRHCLY
Sbjct: 144 QEQLKYFVHNKLSTDKLWHNVKVYLSGHETPGEGEHKIMEFIRSENSKPSHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V R G+ +
Sbjct: 204 GLDADLIMLGLTSHEPHFSLLREEV---------------------------RXGGKKSQ 236
Query: 181 KGDEVVVPKKP-YQFLHIWTLREYLDYEFRIPNPPF--EIDLECIVDDFIFMCFFVGNDF 237
K + P++ + LH+ +REY+DYEF DLE I+DD+I M F VGNDF
Sbjct: 237 K--RITAPEETTFHLLHLSLMREYIDYEFSWLKNHLGSAYDLERIIDDWILMGFLVGNDF 294
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ +L Y +LGGYL + +L+ E +++ + ++ F +
Sbjct: 295 IPHLPNLHINHDALPMLYKTYISVLPSLGGYLNENGHLNLKNFEKYMEKLSEFDREHFNE 354
Score = 177 bits (449), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 74/135 (54%), Positives = 96/135 (71%)
Query: 464 YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVF 523
Y EG+ W++HYYY GV SW W+YPYHYAPF SD++++ ++FELG PF PF QLL V
Sbjct: 459 YVEGIQWILHYYYHGVQSWSWYYPYHYAPFLSDIRNISDLKLTFELGEPFMPFQQLLAVL 518
Query: 524 PSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEV 583
P+AS LPE YR LMT NSPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL +
Sbjct: 519 PAASMGLLPECYRHLMTSENSPIIEYYPVDFKTDLNGKQQEWEAVVLIPFIDEKRLLAAM 578
Query: 584 KKIEHTLTEEEARRN 598
+ H LT+EE RN
Sbjct: 579 EPYNHKLTKEEKDRN 593
>gi|73990326|ref|XP_852437.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 3 [Canis lupus
familiaris]
Length = 1705
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 170/300 (56%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKALEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHETHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSELKAKITFKYDIERIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 172 bits (437), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 77/182 (42%), Positives = 111/182 (60%), Gaps = 2/182 (1%)
Query: 417 DAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYY 476
D + ++D + +K YY K + + D Y + + W++HYYY
Sbjct: 414 DNLEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQWILHYYY 471
Query: 477 EGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYR 536
GV SW W+YPYHYAPF SD++++ I FELG PFKPF QLL V P+AS + LP Y+
Sbjct: 472 HGVQSWSWYYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQ 531
Query: 537 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 596
LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +
Sbjct: 532 HLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMEACNHSLKKEERK 591
Query: 597 RN 598
RN
Sbjct: 592 RN 593
>gi|345789293|ref|XP_534294.3| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Canis lupus
familiaris]
Length = 1692
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 170/300 (56%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKALEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHETHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSELKAKITFKYDIERIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 172 bits (437), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 77/182 (42%), Positives = 111/182 (60%), Gaps = 2/182 (1%)
Query: 417 DAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYY 476
D + ++D + +K YY K + + D Y + + W++HYYY
Sbjct: 414 DNLEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQWILHYYY 471
Query: 477 EGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYR 536
GV SW W+YPYHYAPF SD++++ I FELG PFKPF QLL V P+AS + LP Y+
Sbjct: 472 HGVQSWSWYYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQ 531
Query: 537 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 596
LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +
Sbjct: 532 HLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMEACNHSLKKEERK 591
Query: 597 RN 598
RN
Sbjct: 592 RN 593
>gi|301615368|ref|XP_002937144.1| PREDICTED: 5'-3' exoribonuclease 1 [Xenopus (Silurana) tropicalis]
Length = 1714
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 120/298 (40%), Positives = 175/298 (58%), Gaps = 42/298 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPG EFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAVEK-GEVLPTEAR---FDSNCITPGNEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + LS PGEGEHKIM ++R Q+ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVAIYLSGHETPGEGEHKIMEFIRSQKTKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HEVHFS+LRE V G++++ KR
Sbjct: 204 GLDADLIMLGLTSHEVHFSLLREEVRFGGKKNQ------------------KR------- 238
Query: 181 KGDEVVVPKKP-YQFLHIWTLREYLDYEFR-IPNP-PFEIDLECIVDDFIFMCFFVGNDF 237
V P++ + LH+ +REY+DYEF + N FE D+E I+DD+I M F VGNDF
Sbjct: 239 ----VTAPEETTFHLLHLSLMREYIDYEFSSLKNKISFEYDVERIIDDWILMGFLVGNDF 294
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 295
+PH+P L I A+ LL Y +GGY+ + +L +++ + ++ F
Sbjct: 295 IPHLPHLHINHDALPLLYRTYISVLPTIGGYINENGYLNLYNFGKYLEKLSDFDREHF 352
Score = 166 bits (420), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 100/163 (61%), Gaps = 2/163 (1%)
Query: 436 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 495
+K YY K + + E D Y + + W++HYYY GV SW W+YPYHYAP+ S
Sbjct: 435 YKRTYYMSKMGVEVVSD--EFLADQAKCYVQAIQWILHYYYHGVQSWSWYYPYHYAPYLS 492
Query: 496 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 555
D+ ++ ++F LG PF PF QLL V P+AS LP Y+ LM +SPI D+YP DF+
Sbjct: 493 DICNISHLKLTFNLGKPFMPFEQLLAVLPAASKDLLPLTYQNLMISSDSPIIDYYPQDFK 552
Query: 556 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
D+NGK+ W+ + +PFIDE RLL+ + +L EEE +RN
Sbjct: 553 TDLNGKQQEWEAVVLIPFIDEKRLLEAMVSCNRSLAEEEKKRN 595
>gi|426219417|ref|XP_004003922.1| PREDICTED: 5'-3' exoribonuclease 1 [Ovis aries]
Length = 1702
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 170/300 (56%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAIEK-GETLPAEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSALKDKITFKYDIERIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 76/163 (46%), Positives = 105/163 (64%), Gaps = 2/163 (1%)
Query: 436 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 495
+K YY K + + D Y + + W++HYYY GV SW WFYPYHYAPF S
Sbjct: 433 YKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQWILHYYYHGVQSWSWFYPYHYAPFLS 490
Query: 496 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 555
D++++ I FELG PFKPF QLL V P+AS + LP Y+ LMT +SPI ++YP DF+
Sbjct: 491 DIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQHLMTSDDSPIIEYYPPDFK 550
Query: 556 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +RN
Sbjct: 551 TDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 593
>gi|350591614|ref|XP_003483306.1| PREDICTED: 5'-3' exoribonuclease 1 [Sus scrofa]
Length = 1704
Score = 217 bits (553), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 170/300 (56%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSALKDKITFKYDIERIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 174 bits (442), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 119/203 (58%), Gaps = 4/203 (1%)
Query: 398 QENKEEFKA--KLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREE 455
QEN + A K E + D + ++D + +K YY K + +
Sbjct: 393 QENSVCWAALDKNGEEVVTSKDNLEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSD--D 450
Query: 456 TRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKP 515
D Y + + W++HYYY GV SW WFYPYHYAPF SD++++ I FELG PFKP
Sbjct: 451 FLADQAACYVQAIQWILHYYYHGVQSWSWFYPYHYAPFLSDIRNISTLKIHFELGKPFKP 510
Query: 516 FNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFID 575
F QLL V P+AS + LP Y+ LMT +SPI ++YP DF+ D+NGK+ W+ + +PFID
Sbjct: 511 FEQLLAVLPAASKNLLPTCYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFID 570
Query: 576 EARLLDEVKKIEHTLTEEEARRN 598
E RLL+ ++ H+L +EE +RN
Sbjct: 571 EKRLLEAMETCNHSLKKEERKRN 593
>gi|350591616|ref|XP_003132505.3| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Sus scrofa]
Length = 1691
Score = 217 bits (553), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 170/300 (56%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSALKDKITFKYDIERIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 174 bits (442), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 119/203 (58%), Gaps = 4/203 (1%)
Query: 398 QENKEEFKA--KLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREE 455
QEN + A K E + D + ++D + +K YY K + +
Sbjct: 393 QENSVCWAALDKNGEEVVTSKDNLEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSD--D 450
Query: 456 TRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKP 515
D Y + + W++HYYY GV SW WFYPYHYAPF SD++++ I FELG PFKP
Sbjct: 451 FLADQAACYVQAIQWILHYYYHGVQSWSWFYPYHYAPFLSDIRNISTLKIHFELGKPFKP 510
Query: 516 FNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFID 575
F QLL V P+AS + LP Y+ LMT +SPI ++YP DF+ D+NGK+ W+ + +PFID
Sbjct: 511 FEQLLAVLPAASKNLLPTCYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFID 570
Query: 576 EARLLDEVKKIEHTLTEEEARRN 598
E RLL+ ++ H+L +EE +RN
Sbjct: 571 EKRLLEAMETCNHSLKKEERKRN 593
>gi|291399909|ref|XP_002716613.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 3 [Oryctolagus
cuniculus]
Length = 1690
Score = 217 bits (552), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 170/300 (56%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAVEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSALKEKITFKYDIERIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 176 bits (445), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 118/201 (58%), Gaps = 2/201 (0%)
Query: 398 QENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETR 457
QEN + A K + D + ++D + +K YY K + +
Sbjct: 393 QENSICWAALDKNEVVTSKDNLEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSD--DFL 450
Query: 458 KDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFN 517
D Y + + W++HYYY GV SW W+YPYHYAPF SD++++ I FELG PFKPF
Sbjct: 451 ADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLKIHFELGKPFKPFE 510
Query: 518 QLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEA 577
QLL V P+AS + LP Y+ LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE
Sbjct: 511 QLLAVLPAASKNLLPACYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEK 570
Query: 578 RLLDEVKKIEHTLTEEEARRN 598
RLL+ ++ H+L +EE +RN
Sbjct: 571 RLLEAMEACNHSLKKEERKRN 591
>gi|350402247|ref|XP_003486419.1| PREDICTED: 5'-3' exoribonuclease 1-like [Bombus impatiens]
Length = 1628
Score = 217 bits (552), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 119/297 (40%), Positives = 168/297 (56%), Gaps = 41/297 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
+NQQRSRRF+ +KDA +E++ + +G LP + + FDSN ITPGT FM+ L
Sbjct: 94 INQQRSRRFKTAKDAK---IQEDKAK----VKGTILPKE---KRFDSNCITPGTVFMSKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+I +++ D W+K KVI S + VPGEGEHKIM Y+R + YD NT+HCLY
Sbjct: 144 DEQLKYFITYKISTDKLWQKCKVIFSGSQVPGEGEHKIMDYIRYMKTQANYDVNTKHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L THE+HF++LRE + +Q K +C P
Sbjct: 204 GLDADLIMLGLCTHEIHFTLLREELTFGKKQKK--VCLTP-------------------- 241
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFL 238
+ + H+ LREY+++EF PF +LE I+DD+I M F +GNDF+
Sbjct: 242 -------EETKFCLFHLSLLREYINHEFSSLKEKLPFPYNLENIIDDWILMGFLIGNDFI 294
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 295
PH+P L I GA+++L VYK L GY+ + L R E F++ + ++ F
Sbjct: 295 PHLPNLHIVHGALSVLYQVYKDVMPTLDGYINETGTLRLDRFEKFMERLSRFDTLQF 351
Score = 147 bits (371), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 89/152 (58%)
Query: 464 YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVF 523
Y + W ++YYY G CSW W+YP+HYAP+ SD+KD + F+LG PF PF QLL V
Sbjct: 460 YVRAIQWNLNYYYNGCCSWSWYYPHHYAPYISDIKDFKDLKLEFDLGEPFLPFEQLLAVL 519
Query: 524 PSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEV 583
PS S LP ++ L+T+ SPI +YPT+FE D+NGK W+ + +PFI+E ++D +
Sbjct: 520 PSYSKDLLPPAFQTLLTEDQSPIIKYYPTNFETDLNGKEQEWEAVVLIPFINEKDIVDAM 579
Query: 584 KKIEHTLTEEEARRNSIMADMLFVLLSHPLSA 615
+T EE RN LF L A
Sbjct: 580 APRYPQITPEERARNKHGPMCLFTYTEENLGA 611
>gi|291399905|ref|XP_002716611.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Oryctolagus
cuniculus]
Length = 1727
Score = 217 bits (552), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 170/300 (56%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAVEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSALKEKITFKYDIERIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 175 bits (444), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 118/201 (58%), Gaps = 2/201 (0%)
Query: 398 QENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETR 457
QEN + A K + D + ++D + +K YY K + +
Sbjct: 393 QENSICWAALDKNEVVTSKDNLEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSD--DFL 450
Query: 458 KDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFN 517
D Y + + W++HYYY GV SW W+YPYHYAPF SD++++ I FELG PFKPF
Sbjct: 451 ADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLKIHFELGKPFKPFE 510
Query: 518 QLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEA 577
QLL V P+AS + LP Y+ LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE
Sbjct: 511 QLLAVLPAASKNLLPACYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEK 570
Query: 578 RLLDEVKKIEHTLTEEEARRN 598
RLL+ ++ H+L +EE +RN
Sbjct: 571 RLLEAMEACNHSLKKEERKRN 591
>gi|431899770|gb|ELK07717.1| 5'-3' exoribonuclease 1 [Pteropus alecto]
Length = 1742
Score = 217 bits (552), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 170/300 (56%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAVEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++L+++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNLKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE FS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAQFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSVLKDKITFQYDIERIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 294 IPHLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 172 bits (435), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 77/182 (42%), Positives = 110/182 (60%), Gaps = 2/182 (1%)
Query: 417 DAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYY 476
D + ++D + +K YY K + + D Y + + W++HYYY
Sbjct: 413 DNLEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQWILHYYY 470
Query: 477 EGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYR 536
GV SW W+YPYHYAPF SD++++ I FELG PFKPF QLL V P+AS + LP Y+
Sbjct: 471 HGVQSWSWYYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQ 530
Query: 537 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 596
LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+L EE +
Sbjct: 531 HLMTREDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKTEERK 590
Query: 597 RN 598
RN
Sbjct: 591 RN 592
>gi|395528095|ref|XP_003766167.1| PREDICTED: 5'-3' exoribonuclease 1 [Sarcophilus harrisii]
Length = 1695
Score = 216 bits (551), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 119/298 (39%), Positives = 170/298 (57%), Gaps = 43/298 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFRA+K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 79 MNQQRGRRFRAAKEA------EDKIKKALEK-GEILPTEAR---FDSNCITPGTEFMARL 128
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y++++++++D W+ + + LS PGEGEHKIM ++R ++ P +DPN RHCLY
Sbjct: 129 HEHLKYFVNMKISSDKSWQGVTIYLSGHETPGEGEHKIMEFIRSEKGKPDHDPNIRHCLY 188
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 189 GLDADLIMLGLTSHESHFSLLREEVRFGGK------------------------------ 218
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF
Sbjct: 219 KTQRVCAPEETTFHLLHLSLMREYIDYEFSALKDKISFKYDIERIIDDWILMGFLVGNDF 278
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 295
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F
Sbjct: 279 IPHLPHLHINHDALPLLYRTYMTVLPELGGYINENGHLNLPRFEKYLIKLSDFDREHF 336
Score = 168 bits (426), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 79/184 (42%), Positives = 111/184 (60%), Gaps = 3/184 (1%)
Query: 416 SDAFNSDNPEEDKVKLGE-PGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 474
S + D PE+D + E +K YY K + + + D Y + + W++HY
Sbjct: 396 SKSVVEDEPEDDDLFETEFRQYKRTYYMTKMGVEIVSD--DFLADQAECYVQAIQWILHY 453
Query: 475 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEH 534
YY GV SW W+YPYHYAP+ SD++++ + I FELG PF PF QLL V P+AS LP
Sbjct: 454 YYHGVQSWSWYYPYHYAPYLSDIRNISELKIQFELGKPFMPFEQLLAVLPAASKDLLPGC 513
Query: 535 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 594
Y+ LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL ++ L EEE
Sbjct: 514 YQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDETRLLQAMESCNKYLKEEE 573
Query: 595 ARRN 598
+RN
Sbjct: 574 KKRN 577
>gi|126338146|ref|XP_001364729.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Monodelphis
domestica]
Length = 1700
Score = 216 bits (551), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 119/298 (39%), Positives = 170/298 (57%), Gaps = 43/298 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFRA+K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRAAKEA------EDKIKKALEK-GEILPSEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y++++++++D W+ + + LS PGEGEHKIM ++R ++ P +DPN RHCLY
Sbjct: 144 HEHLKYFVNMKISSDKSWQGVTIYLSGHETPGEGEHKIMEFIRSEKGKPDHDPNIRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHESHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSALKDKISFKYDIERIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 295
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F
Sbjct: 294 IPHLPHLHINHDALPLLYRTYMTVLPELGGYINENGHLNLPRFEKYLIKLSDFDREHF 351
Score = 167 bits (423), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 79/184 (42%), Positives = 110/184 (59%), Gaps = 3/184 (1%)
Query: 416 SDAFNSDNPEEDKVKLGE-PGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 474
S + D PE+D + E +K YY K + + + D Y + + W++HY
Sbjct: 411 SKSVIEDEPEDDDLFETEFRQYKRTYYMTKMGVEIVSD--DFLADQAECYVQAIQWILHY 468
Query: 475 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEH 534
YY GV SW W+YPYHYAP+ SD++++ + I FELG PF PF QLL V P+AS LP
Sbjct: 469 YYHGVQSWSWYYPYHYAPYLSDIRNISELKIQFELGKPFMPFEQLLAVLPAASKDLLPGC 528
Query: 535 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 594
Y+ LMT SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL ++ L EEE
Sbjct: 529 YQHLMTSEESPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDETRLLQAMESCHKYLREEE 588
Query: 595 ARRN 598
+RN
Sbjct: 589 EKRN 592
>gi|426342416|ref|XP_004037841.1| PREDICTED: 5'-3' exoribonuclease 1-like [Gorilla gorilla gorilla]
Length = 1432
Score = 216 bits (551), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 168/294 (57%), Gaps = 43/294 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKMKKAIEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSALKEKITFKYDIERIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYE 291
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++
Sbjct: 294 IPHLPHLHINHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFD 347
Score = 172 bits (437), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 116/189 (61%), Gaps = 3/189 (1%)
Query: 410 ELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLC 469
E++ K D + ++D + +K YY K + + D Y + +
Sbjct: 408 EMITSK-DNLEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQ 464
Query: 470 WVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSH 529
W++HYYY GV SW W+YPYHYAPF SD++++ I FELG PFKPF QLL V P+AS +
Sbjct: 465 WILHYYYHGVQSWSWYYPYHYAPFLSDIQNISTLKIHFELGKPFKPFEQLLAVLPAASKN 524
Query: 530 ALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHT 589
LP Y+ LMT+ +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+
Sbjct: 525 LLPACYQHLMTNEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHS 584
Query: 590 LTEEEARRN 598
L +EE +RN
Sbjct: 585 LKKEERKRN 593
>gi|334347265|ref|XP_003341907.1| PREDICTED: 5'-3' exoribonuclease 1 [Monodelphis domestica]
Length = 1713
Score = 216 bits (551), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 119/298 (39%), Positives = 170/298 (57%), Gaps = 43/298 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFRA+K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRAAKEA------EDKIKKALEK-GEILPSEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y++++++++D W+ + + LS PGEGEHKIM ++R ++ P +DPN RHCLY
Sbjct: 144 HEHLKYFVNMKISSDKSWQGVTIYLSGHETPGEGEHKIMEFIRSEKGKPDHDPNIRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHESHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSALKDKISFKYDIERIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 295
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F
Sbjct: 294 IPHLPHLHINHDALPLLYRTYMTVLPELGGYINENGHLNLPRFEKYLIKLSDFDREHF 351
Score = 167 bits (423), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 79/184 (42%), Positives = 110/184 (59%), Gaps = 3/184 (1%)
Query: 416 SDAFNSDNPEEDKVKLGE-PGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 474
S + D PE+D + E +K YY K + + + D Y + + W++HY
Sbjct: 411 SKSVIEDEPEDDDLFETEFRQYKRTYYMTKMGVEIVSD--DFLADQAECYVQAIQWILHY 468
Query: 475 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEH 534
YY GV SW W+YPYHYAP+ SD++++ + I FELG PF PF QLL V P+AS LP
Sbjct: 469 YYHGVQSWSWYYPYHYAPYLSDIRNISELKIQFELGKPFMPFEQLLAVLPAASKDLLPGC 528
Query: 535 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 594
Y+ LMT SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL ++ L EEE
Sbjct: 529 YQHLMTSEESPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDETRLLQAMESCHKYLREEE 588
Query: 595 ARRN 598
+RN
Sbjct: 589 EKRN 592
>gi|254582643|ref|XP_002499053.1| ZYRO0E02486p [Zygosaccharomyces rouxii]
gi|238942627|emb|CAR30798.1| ZYRO0E02486p [Zygosaccharomyces rouxii]
Length = 1526
Score = 216 bits (550), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 130/324 (40%), Positives = 177/324 (54%), Gaps = 49/324 (15%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA E+ L++ E G ++P + FDSN ITPGTEFMA L
Sbjct: 94 MNQQRARRFRTAMDA------EKALKKAIEN-GEEIP---KGEPFDSNSITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ LQY+IH ++ ND W +K+I S VPGEGEHKIM ++R R Y+PNTRHC+Y
Sbjct: 144 TKNLQYFIHDKITNDSSWRDVKIIFSGHEVPGEGEHKIMDFIRNIRGQGDYNPNTRHCIY 203
Query: 121 GLDADLIMLALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADLIML L+ H HF++LR EVVF GK +K+ +
Sbjct: 204 GLDADLIMLGLSVHAPHFALLREEVVF----------------------GKRGKKSTALE 241
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDF 237
+ + LHI LREY++ EF FE D E I+DDFI + F +GNDF
Sbjct: 242 HQN---------FYLLHISLLREYMELEFEEIADELQFEYDFERILDDFILIMFVIGNDF 292
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
LP++P L + + A LLM +K+ GY+ + +L+ + ++ + +E IF+K
Sbjct: 293 LPNLPDLHLNKEAFPLLMKTFKEALLHADGYINYNGQINLKTLRLWLHYLSQFELMIFEK 352
Query: 298 R----ARLHQRHAERIKREKAQAR 317
HQR E I E A R
Sbjct: 353 NDIDVQWFHQR-LENISLEGADQR 375
Score = 156 bits (394), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 102/172 (59%), Gaps = 4/172 (2%)
Query: 436 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 495
WK+RYY+EK + + T D+ Y EGL WV++YYY G SW W+Y YHYAP S
Sbjct: 510 WKDRYYKEKLGFSIHDTEKLT--DITENYVEGLQWVLYYYYRGCASWGWYYHYHYAPRIS 567
Query: 496 DLK-DLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDF 554
DL+ LDQ + FE G PF PF QL+ V P S + +P +R LM D SPI DFYP +
Sbjct: 568 DLQLGLDQI-LEFEKGIPFTPFQQLMAVLPERSKNLIPAPFRPLMYDEKSPIIDFYPAEV 626
Query: 555 EVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 606
+ D NGK W+ + + F+DE RL D + + LT +E RN+ D+++
Sbjct: 627 DTDKNGKTADWEAVVLISFVDEKRLQDAMAPLMSKLTPDEKARNTAGTDLIY 678
>gi|449531061|ref|XP_004172506.1| PREDICTED: 5'-3' exoribonuclease 4-like, partial [Cucumis sativus]
Length = 254
Score = 216 bits (550), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 113/143 (79%), Positives = 126/143 (88%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+KDAA++ AEEERLR+EFE EG+ L PK + DSNVITPGTEFM VL
Sbjct: 112 MNQQRSRRFRAAKDAAEAEAEEERLRKEFEAEGQTLLPKEKPETCDSNVITPGTEFMGVL 171
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S+ALQYY RLN++PGW KVILSD+NVPGEGEHKIM Y+RLQRNLPG+DPNTRHCLY
Sbjct: 172 SVALQYYAQSRLNHNPGWRFTKVILSDSNVPGEGEHKIMQYIRLQRNLPGFDPNTRHCLY 231
Query: 121 GLDADLIMLALATHEVHFSILRE 143
GLDADLIML+LATHEVHFSILRE
Sbjct: 232 GLDADLIMLSLATHEVHFSILRE 254
>gi|340729609|ref|XP_003403090.1| PREDICTED: LOW QUALITY PROTEIN: 5'-3' exoribonuclease 1-like
[Bombus terrestris]
Length = 1626
Score = 216 bits (550), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 120/297 (40%), Positives = 167/297 (56%), Gaps = 41/297 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
+NQQRSRRF+ +KDA +E++ + +G LP + + FDSN ITPGT FM+ L
Sbjct: 94 INQQRSRRFKNAKDAK---IQEDKAK----IKGTTLPKE---KRFDSNCITPGTVFMSKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+I +++ D W+K KVI S + VPGEGEHKIM Y+R + YD NT+HCLY
Sbjct: 144 DEQLKYFITYKISTDKLWQKCKVIFSGSQVPGEGEHKIMDYIRYMKTQANYDVNTKHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L THEVHF++LRE V +Q K +C P
Sbjct: 204 GLDADLIMLGLCTHEVHFTLLREEVTFGKKQXK--VCLTP-------------------- 241
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFL 238
+ + H+ LREY+++EF PF +LE I+DD+I M F +GNDF+
Sbjct: 242 -------EETKFCLFHLSLLREYINHEFSSLKEKLPFPYNLENIIDDWILMGFLIGNDFI 294
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 295
PH+P L I GA+++L VY L GY+ + L R E F++ + ++ F
Sbjct: 295 PHLPNLHIVHGALSVLYQVYMDVMPTLDGYINETGTLRLDRFEKFMERLSRFDTLQF 351
Score = 146 bits (369), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 85/135 (62%)
Query: 464 YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVF 523
Y + W ++YYY G CSW W+YP+HYAP+ SD+KD + F+LG PF PF QLL V
Sbjct: 458 YVRAIQWNLNYYYNGCCSWSWYYPHHYAPYISDIKDFKDLKLEFDLGEPFLPFEQLLAVL 517
Query: 524 PSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEV 583
PS S LP ++ L+T+ SPI +YPT+FE D+NGK W+ + +PFI+E ++D +
Sbjct: 518 PSYSKDLLPPAFQTLLTEDQSPIIKYYPTNFETDLNGKEQEWEAVVLIPFINEKDIVDAM 577
Query: 584 KKIEHTLTEEEARRN 598
+T EE RN
Sbjct: 578 APHYPQITPEERARN 592
>gi|402588112|gb|EJW82046.1| hypothetical protein WUBG_07043 [Wuchereria bancrofti]
Length = 442
Score = 216 bits (550), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 123/297 (41%), Positives = 169/297 (56%), Gaps = 16/297 (5%)
Query: 420 NSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGV 479
+S++ D+V+L E GWK+RYY+ KF + R+ V L Y EGLCWV+HYYY+G
Sbjct: 10 SSEDEAFDEVRLWEDGWKDRYYKSKFQVDGKDI--VFRRKVALAYVEGLCWVLHYYYQGC 67
Query: 480 CSWQWFYPYHYAPFASDLKDLDQFNISFE-LGHPFKPFNQLLGVFPSASSHALPEHYRKL 538
SW W+YP+HYAPFASD + QF F PFKP QL+GVFP+AS LPE +++L
Sbjct: 68 ASWDWYYPFHYAPFASDFDAVSQFKPDFSAYTEPFKPLQQLMGVFPAASRMHLPEAWQEL 127
Query: 539 MTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
M P SPI DFYP +F +D+NGK+ +WQG+A LPF+DE RLL+ +K +E L E RN
Sbjct: 128 MISPVSPIIDFYPDNFVIDLNGKKCAWQGVALLPFVDEKRLLEVLKPMEDKLDAFEKERN 187
Query: 599 SIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCA-GD 657
S D LFV SHP Y E + K+ ++ ++ L+ GM G + A
Sbjct: 188 SRGPDRLFVGPSHPF----YNFAEALYESGRKDSTDLA--IDTSLTFGMAGTVGVDAKAI 241
Query: 658 PHPPVFRSPVASME--DIMGNQVLCAIYKLPDAHK----HVTRPPAGVIFPKKIVQL 708
++SP++ E DI N+ + IYK P K R P V P+ + +
Sbjct: 242 MKGQNYKSPLSVDEFTDIAKNKAIMMIYKDPQFEKGYVFAAKRLPGAVDVPRTLKDM 298
>gi|21755602|dbj|BAC04718.1| unnamed protein product [Homo sapiens]
Length = 473
Score = 216 bits (549), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 169/294 (57%), Gaps = 43/294 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYE 291
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++
Sbjct: 294 IPHLPHLHINHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFD 347
>gi|308503096|ref|XP_003113732.1| CRE-XRN-2 protein [Caenorhabditis remanei]
gi|308263691|gb|EFP07644.1| CRE-XRN-2 protein [Caenorhabditis remanei]
Length = 988
Score = 216 bits (549), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 123/318 (38%), Positives = 182/318 (57%), Gaps = 26/318 (8%)
Query: 422 DNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCS 481
D +D ++L E GWK+RYY KF+ + + + R V Y EGLCWV+ YYY+G S
Sbjct: 528 DEEPKDDIRLFESGWKDRYYRAKFDVGS--DDVDFRHRVAWAYVEGLCWVLRYYYQGCSS 585
Query: 482 WQWFYPYHYAPFASDLKDLDQFNISF-ELGHPFKPFNQLLGVFPSASSHALPEHYRKLMT 540
W W++PYHYAPFASD + + +F F + PF P QL+ VFP+AS LP ++KLM
Sbjct: 586 WDWYFPYHYAPFASDFETVGEFKPDFTKPTKPFNPLEQLMSVFPAASKQHLPVEWQKLMI 645
Query: 541 DPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSI 600
+ +SPI D YP DF +D+NGK+Y+WQG+A LPF+DE RLL +K + TLT+EE +RN+
Sbjct: 646 EDDSPIIDLYPADFRIDLNGKKYAWQGVALLPFVDEQRLLATLKSVYPTLTDEEKQRNTR 705
Query: 601 MADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHP 660
+ +F+ +H + + + K + V+ L+P L +G++G I+ + P
Sbjct: 706 GPNRIFIGRNH----KSFAFFQQVAESKSTDMVD----LDPSLLNGVSGKIASDSTATAP 757
Query: 661 PV-FRSPV--ASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLK-PAPV 716
+ F SPV +D+ N +C +Y+ P+ P +FP V+L+ +K P
Sbjct: 758 GLPFVSPVNHEDCQDLPTNCGICVLYEDPEY-------PENYVFPA--VRLDGVKEPEKT 808
Query: 717 LWHEDSGRRPHENGRHNP 734
L ED R GR NP
Sbjct: 809 LKPEDWNER--REGRFNP 824
>gi|29126940|gb|AAH48104.1| XRN1 protein [Homo sapiens]
Length = 459
Score = 215 bits (548), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 169/294 (57%), Gaps = 43/294 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYE 291
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++
Sbjct: 294 IPHLPHLHINHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFD 347
>gi|71052193|gb|AAH39314.1| XRN1 protein [Homo sapiens]
Length = 459
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 169/294 (57%), Gaps = 43/294 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYE 291
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++
Sbjct: 294 IPHLPHLHINHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFD 347
>gi|440293121|gb|ELP86283.1| 5'->3' exoribonuclease, putative [Entamoeba invadens IP1]
Length = 782
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 120/291 (41%), Positives = 171/291 (58%), Gaps = 21/291 (7%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRF+A++D + E + + +G LP + + DSN ITPGT FM +
Sbjct: 86 MNQQRARRFKAARDKKSAMDFEAQQAADALAKGTPLP--ASKKEMDSNCITPGTVFMDRV 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+ Y+ R++ W+K+ VI+SD++VPGEGEHKIM Y+R Q++ P Y+PN HC+Y
Sbjct: 144 IETLKAYVKERISTSAYWKKLVVIISDSSVPGEGEHKIMEYIRKQKDQPNYNPNLNHCIY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML LATHE +F ++RE V KC++CG H A C K +
Sbjct: 204 GLDADLIMLTLATHERNFFVIREDVLNT----KCYICGG-AHPVAFCPKKNEINP----- 253
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
D + KP+ F+ I +R+ + +P D E I+DDFIF+CFF+GNDFLPH
Sbjct: 254 -MDPI---NKPFVFVSILDVRKLIYLLGMVPG----YDFERIIDDFIFLCFFIGNDFLPH 305
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYE 291
P+LEI I+L+M +Y KEF GY+TD + ++ + + E
Sbjct: 306 SPSLEIYHEDISLIMELY-KEFLLKNGYVTDAGNLDMAAFKNLLTFLSRNE 355
Score = 133 bits (335), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 103/325 (31%), Positives = 168/325 (51%), Gaps = 28/325 (8%)
Query: 384 AAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEE 443
+AI EA+ + +T EEF+ KE K FN D V+ +PG++ERYY
Sbjct: 383 SAIAEAKANKQT------EEFEKLTKEFTESKL-KFNEMIFGGD-VEYDKPGYEERYYNS 434
Query: 444 KFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDL-KDLD- 501
K + +E ++ +++V Y +GL WV+ YYY+G W WF+P++YAPF +D+ K D
Sbjct: 435 KLHIDIVKEPKKV-EELVHEYVKGLVWVLKYYYQGCKGWGWFFPHNYAPFITDMAKYFDY 493
Query: 502 QFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGK 561
+NI+F+ P P QL+ V P S +P+ R L+ SP+ +FYP F++D +G
Sbjct: 494 TWNITFDFEEPSTPVEQLMSVLPPFSKKCVPKSCRALLNSETSPLKEFYPETFQIDFDGY 553
Query: 562 RYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN--SIMADMLFVLLSHPLSASI-- 617
+ G+ LPFI+ +LL ++ IE ++ RN S +A + F ++PL +I
Sbjct: 554 AVEYLGVVLLPFIERPKLLKYLRPIEDAFVGDDKERNKASGVAHIYF-YRNNPLFKNIGQ 612
Query: 618 -YTLD--EHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHP---PVFRSPV-ASM 670
YT D +H LK +++ K + + + D + P + + H VF PV +
Sbjct: 613 AYTKDPIKHLNHLKDLDKL-YKGKFSLDKFD--EDEVFPLSCNMHEIAGTVF--PVKTTY 667
Query: 671 EDIMGNQVLCAIYKLPDAHKHVTRP 695
D++G+ V+C KH+ P
Sbjct: 668 NDVIGDCVVCGFENPEYDEKHIFIP 692
>gi|342878482|gb|EGU79819.1| hypothetical protein FOXB_09678 [Fusarium oxysporum Fo5176]
Length = 1380
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 120/326 (36%), Positives = 187/326 (57%), Gaps = 48/326 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR + DA E+ R++ +EG ++P + + FDSN ITPGTEFMA L
Sbjct: 60 MNQQRSRRFRTALDA-------EKAREKAIKEGVEIPKE---EPFDSNCITPGTEFMAKL 109
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S L+Y+++ +++ D W+ +++LS VPGEGEHKIM Y+R + P Y+ N RHCLY
Sbjct: 110 SQQLRYFVNKKVSEDTDWQGCEIVLSGHEVPGEGEHKIMEYIRNAKAQPNYNQNVRHCLY 169
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+ +K K+ E +
Sbjct: 170 GLDADLIMLGLLSHDPHFCLLREEV-TFGR-------------------ASKTKSKELEH 209
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNP----PFEIDLECIVDDFIFMCFFVGND 236
+ + LH+ +REYL+ EF+ F DLE ++DDFI M FFVGND
Sbjct: 210 QN---------FYLLHLCIVREYLEMEFQELQEDGALSFPFDLERVIDDFILMAFFVGND 260
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFI-----QAVGSYE 291
FLP++P+L I EGA+ + +YK GY+ + ++ R++ + + ++E
Sbjct: 261 FLPNLPSLHINEGALAKMFRIYKSILPKCDGYMNENGVINMERLQRLLGELSKTEIDAFE 320
Query: 292 DRIFQKRARLHQRHAERIKREKAQAR 317
+ + ++ ++ ++++ + A+A+
Sbjct: 321 NDVSDEKWFASKQMEKKLENKNAEAK 346
Score = 171 bits (434), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 76/173 (43%), Positives = 106/173 (61%)
Query: 435 GWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA 494
GWK +YY +KF P+ ++ + Y +GL WV++YYY+G+ SW WFY YHYAP
Sbjct: 479 GWKTKYYLQKFEEWAPDNYDKELTALCENYVQGLQWVLYYYYQGIASWPWFYGYHYAPLI 538
Query: 495 SDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDF 554
SD+ +++F+ G PF P+ QL+GV P S +P+ Y LMT+P+SPI DFYP DF
Sbjct: 539 SDVVKGVGADLNFKKGQPFLPYEQLMGVLPDRSKKIVPKVYHDLMTNPDSPIIDFYPRDF 598
Query: 555 EVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
E+DMNGK+ W+ + K+PFIDE RLL + L +E RN + F
Sbjct: 599 ELDMNGKKMDWEAVIKIPFIDEKRLLAAMAPKNELLEPDEKARNGFGVPLKFT 651
>gi|320169726|gb|EFW46625.1| Dhm2 protein [Capsaspora owczarzaki ATCC 30864]
Length = 1615
Score = 214 bits (546), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 123/322 (38%), Positives = 172/322 (53%), Gaps = 63/322 (19%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR++K E E E R G+ +P +++ FDSN ITPGT FM+ L
Sbjct: 59 MNQQRARRFRSAK-------ENESKLAEARRSGKPIP---ETEPFDSNCITPGTAFMSKL 108
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S+ L+Y+I ++ D W ++VILS +PGEGEHKIM YVR Q++LPGYDPNTRHCLY
Sbjct: 109 SVQLKYFISRKITTDRAWRNVEVILSGHEIPGEGEHKIMEYVRTQKSLPGYDPNTRHCLY 168
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADL++L LA+HE F +LRE V +G +K G
Sbjct: 169 GLDADLMILGLASHEPQFCLLREEV----------------KFGGGKKGPQSKKTG---- 208
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEI----------------------- 217
G + + + LH+ LREYL+ EFR P F++
Sbjct: 209 -GADAIT----FFLLHLSLLREYLEVEFR---PAFDMAQAEYKAALAALPAGTPAPPAPL 260
Query: 218 --DLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKP 275
+LE ++DD++ M + +GNDF+PH+P L I GA L VY + YL +
Sbjct: 261 VFNLESVIDDWVLMGYLIGNDFIPHLPHLHIDTGAWEYLYKVYGEIVPKQQSYLNINGRI 320
Query: 276 SLRRVEHFIQAVGSYEDRIFQK 297
L E F++ + ++ IFQ+
Sbjct: 321 HLPTFELFMERLSRFDFDIFQE 342
Score = 147 bits (370), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 64/125 (51%), Positives = 83/125 (66%)
Query: 482 WQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTD 541
W W+YP+HY+P+ASDL+ +I FELG PF+PF QLLGV P+AS H LP Y +LMT
Sbjct: 434 WGWYYPFHYSPYASDLRGFSHLHIEFELGKPFRPFQQLLGVLPAASKHLLPPVYHELMTS 493
Query: 542 PNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIM 601
P SP+ D YP DFE D+NGK+ W+ + +PFIDE RLL +K + L EE RN
Sbjct: 494 PMSPVIDLYPLDFESDLNGKKNEWEAVILIPFIDEKRLLAAMKPFDARLNAEERARNRYG 553
Query: 602 ADMLF 606
++ F
Sbjct: 554 QELSF 558
>gi|313230942|emb|CBY18940.1| unnamed protein product [Oikopleura dioica]
Length = 1623
Score = 214 bits (546), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 134/348 (38%), Positives = 184/348 (52%), Gaps = 56/348 (16%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR++K+A E ER +E +G LP + FDSNVITPGT FM L
Sbjct: 94 MNQQRSRRFRSAKEAE----ENERKAKE---KGESLPTEGK---FDSNVITPGTGFMVRL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+I ++ +D W I V LS PGEGEHKIM Y+R QR L +DP TRHCLY
Sbjct: 144 DKQLRYFIQNKITHDDAWRGITVFLSGHETPGEGEHKIMEYIRYQRTLSDHDPRTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML LATHE +FS+LRE + +DK + P R AG +
Sbjct: 204 GLDADLIMLGLATHEPNFSLLREEIQFTKAKDKMIIVFIP-----------YRSAGRQNR 252
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFR-----------IPNPPFEIDLECIVDDFIFM 229
D + LH+ +R+Y+ +EF+ + E DLE ++DD++ M
Sbjct: 253 PEDIT------FHLLHLSVMRDYIHHEFKDLRTSLASRKSSGDIEIEYDLERLIDDWVLM 306
Query: 230 CFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGS 289
F VGNDF+PH+P ++I++ + +L Y K LG YLT+ K L +E F +
Sbjct: 307 GFLVGNDFVPHLPNMQIKQDHLPVLYKSYSKVVPKLGKYLTERGKIDLDVLEEFFFVLSE 366
Query: 290 YEDRIFQ-----------KRARLHQRHAERIKREKAQARRGDDVEPLA 326
E F+ KR+ + + H ++ A D++E LA
Sbjct: 367 NEREQFENSQADDKYLAGKRSMMKESHGKK-------AAAHDELEALA 407
Score = 155 bits (393), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 101/164 (61%), Gaps = 4/164 (2%)
Query: 436 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 495
++ YY KFN + +E + T K+ Y L W+MHYYY GV SW W++P+HY+PF S
Sbjct: 451 YRNGYYHSKFNKRLTKEFQYTMKN---EYVRALQWIMHYYYNGVQSWGWYFPFHYSPFLS 507
Query: 496 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSH-ALPEHYRKLMTDPNSPISDFYPTDF 554
D+ L + N+ ++ G PF PF QLL V P++S ALPE + LM P S I DFYPT+F
Sbjct: 508 DMVKLKECNLKYDYGKPFLPFEQLLAVLPASSGKVALPEVFHSLMDSPTSSIIDFYPTEF 567
Query: 555 EVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
E D+NGK W+ + +PFIDE RL + ++ L+ + RN
Sbjct: 568 ETDLNGKMQDWEAVVLIPFIDENRLYEAMQPALAKLSPFDKCRN 611
>gi|392350257|ref|XP_003750606.1| PREDICTED: 5'-3' exoribonuclease 1-like, partial [Rattus
norvegicus]
Length = 453
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 168/294 (57%), Gaps = 43/294 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 69 MNQQRGRRFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARL 118
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 119 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 178
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 179 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 208
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF
Sbjct: 209 KTQRVCAPEETTFHLLHLSLMREYIDYEFSALKEKITFKYDIEKIIDDWILMGFLVGNDF 268
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYE 291
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++
Sbjct: 269 IPHLPHLHINHDALPLLYGTYIAILPELGGYINESGHLNLPRFERYLVKLSDFD 322
>gi|322812519|pdb|3PIE|A Chain A, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant
gi|322812520|pdb|3PIE|B Chain B, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant
gi|322812521|pdb|3PIE|C Chain C, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant
gi|322812522|pdb|3PIE|D Chain D, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant
gi|322812523|pdb|3PIF|A Chain A, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant In Complex With Manganese
gi|322812524|pdb|3PIF|B Chain B, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant In Complex With Manganese
gi|322812525|pdb|3PIF|C Chain C, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant In Complex With Manganese
gi|322812526|pdb|3PIF|D Chain D, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant In Complex With Manganese
Length = 1155
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 119/301 (39%), Positives = 172/301 (57%), Gaps = 44/301 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA E+ Q+ G +LP + FDSN ITPGTEFMA L
Sbjct: 94 MNQQRARRFRTAMDA-------EKALQKAIENGDELPK---GEPFDSNAITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+IH ++ ND W+ +KVI S VPGEG+HKIM Y+R R Y+PNTRHC+Y
Sbjct: 144 TENLKYFIHDKITNDTRWQNVKVIFSGHEVPGEGQHKIMDYIRAIRAQEDYNPNTRHCIY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLI+L L+TH+ HF +LRE V F +
Sbjct: 204 GLDADLIILGLSTHDHHFCLLREEV-------------------------------TFGK 232
Query: 181 KGDEV-VVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDF 237
+ V + + + LH+ LREYL EF + FE D E ++DDFIF+ F +GNDF
Sbjct: 233 RSSSVKTLETQNFFLLHLSILREYLALEFEEITDSVQFEYDFERVLDDFIFVLFTIGNDF 292
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
LP++P L +++GA +L+ +K+ + + GY+ + K +L R +++ + +E F+K
Sbjct: 293 LPNLPDLHLKKGAFPVLLQTFKEALQHMDGYINEQGKINLARFSIWLKYLSDFEYLNFEK 352
Query: 298 R 298
+
Sbjct: 353 K 353
Score = 160 bits (404), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 111/174 (63%), Gaps = 4/174 (2%)
Query: 436 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 495
WK++YY++K + + ++ K++ Y GL WV++YYY G SW W+Y YHYAP S
Sbjct: 491 WKDQYYKDKLDFSINDT--DSLKEMTENYVGGLQWVLYYYYRGCPSWSWYYRYHYAPRIS 548
Query: 496 D-LKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDF 554
D +K +DQ NI F G PFKPF QL+ V P S + +P YR LM D +SPI DFYP +
Sbjct: 549 DVIKGIDQ-NIEFHKGQPFKPFQQLMAVLPERSKNLIPVVYRPLMYDEHSPILDFYPNEV 607
Query: 555 EVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVL 608
E+D+NGK W+ + K+ F+D+ RL++ + + L+ +E +RNS D++F+
Sbjct: 608 ELDLNGKTADWEAVVKISFVDQKRLVEAMAPYDAKLSPDEKKRNSFGTDLIFIF 661
>gi|390353506|ref|XP_003728123.1| PREDICTED: 5'-3' exoribonuclease 1-like [Strongylocentrotus
purpuratus]
Length = 1915
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 121/300 (40%), Positives = 163/300 (54%), Gaps = 41/300 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR SA E E +E R+G LP D + FDSN ITPGT+FM L
Sbjct: 94 MNQQRGRRFR-------SALEAEEREKEAVRKGETLP---DEKRFDSNCITPGTDFMVRL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++ ++ D W+ I++ LS PGEGEHKIM ++R ++ +DPNTRHCLY
Sbjct: 144 QRQLKYFVNTKITEDSKWQGIRIFLSGHETPGEGEHKIMDFIRAEKAQKEHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+Q AKR
Sbjct: 204 GLDADLIMLGLISHEPHFSLLREEVRF-GKQ-------------------AKRP------ 237
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFE-IDLECIVDDFIFMCFFVGNDFLP 239
V + + LH+ REYL EF + D ECI+DD++ + F VGNDF+P
Sbjct: 238 ----TTVEETTFHLLHLSLFREYLALEFSAVKDQIDWFDAECIIDDWVLLGFLVGNDFVP 293
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
++P L I A+ LL Y K L GYL +G +L R E F++ + ++ F ++
Sbjct: 294 NLPDLHISHSALPLLYKTYIKVLPTLDGYLNEGGHLNLPRFEKFMKELSKFDYENFDSQS 353
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 129/224 (57%), Gaps = 12/224 (5%)
Query: 390 ENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKT 449
EN++++ E K+ + KL+ + + +N + D++ E G E Y++ KF +T
Sbjct: 365 ENAWKSKKVEMKKAIREKLQAEIPGFMNMEWIENKDIDELSSDEEG--EDYFD-KFRKQT 421
Query: 450 PEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFEL 509
+ +V Y + W++HYYY G+ SW W+YP+HY+P+ SDLKD ++ +
Sbjct: 422 AQ--------IVSDYIYAIQWILHYYYNGIQSWSWYYPHHYSPYMSDLKDFSDLVVTLDK 473
Query: 510 GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIA 569
G PF PF QLL V P AS LP+ Y LM + NSPI ++YP +FE D+NGK +W+ +
Sbjct: 474 GQPFLPFEQLLAVLPPASRDHLPQAYHPLMLNENSPILEYYPLEFEQDLNGKLQAWEAVV 533
Query: 570 KLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVL-LSHP 612
+PFIDE RL +K E LTE E +RN +L+ L++P
Sbjct: 534 LIPFIDENRLWAGMKMYEDKLTEAEKKRNCHSEHLLYTTDLANP 577
>gi|89269888|emb|CAJ83489.1| 5'-3' exoribonuclease 1 [Xenopus (Silurana) tropicalis]
Length = 385
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/294 (40%), Positives = 175/294 (59%), Gaps = 42/294 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAVEK-GEVLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + LS PGEGEHKIM ++R Q+ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVAIYLSGHETPGEGEHKIMEFIRSQKTKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HEVHFS+LRE V G++++ KR
Sbjct: 204 GLDADLIMLGLTSHEVHFSLLREEVRFGGKKNQ------------------KR------- 238
Query: 181 KGDEVVVPKKP-YQFLHIWTLREYLDYEFR-IPNP-PFEIDLECIVDDFIFMCFFVGNDF 237
V P++ + LH+ +REY+DYEF + N FE D+E I+DD+I M F VGNDF
Sbjct: 239 ----VTAPEETTFHLLHLSLMREYIDYEFSSLKNKISFEYDVERIIDDWILMGFLVGNDF 294
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYE 291
+PH+P L I A+ LL Y +GGY+ + +L +++ + ++
Sbjct: 295 IPHLPHLHINHDALPLLYRTYISVLPTIGGYINENGYLNLYNFGKYLEKLSDFD 348
>gi|390354472|ref|XP_786402.3| PREDICTED: 5'-3' exoribonuclease 2-like [Strongylocentrotus
purpuratus]
Length = 803
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 145/391 (37%), Positives = 202/391 (51%), Gaps = 43/391 (10%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
M + RS RF SK ++ +++ R E E GR LPPK PG FM
Sbjct: 152 MKKMRSSRFIGSKIRRENREAQDKKRSEIEDSGRHLPPKRKETY-------PGKGFMFRQ 204
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ +YY+ RLNNDPGW+ IKVILSDAN PGEGEHKIM Y+R QR P Y+P+T HC++
Sbjct: 205 AEYFRYYVTERLNNDPGWQGIKVILSDANTPGEGEHKIMDYIRKQRANPDYNPSTHHCVH 264
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G D +LATHE++F+I+RE F P Q+ C LC Q H +C+G D
Sbjct: 265 GAD------SLATHEMNFTIIRE-QFKPNQRRACELCYQEDHEMTDCQG--------LDA 309
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
+E EYL E + F + E ++DD++F+CFFVGNDFLPH
Sbjct: 310 PPEE--------------RENEYLVNEL-LEGIHFHCNHERVIDDWVFLCFFVGNDFLPH 354
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+L IREGAI++L+ +Y+K YLT+ +L+ V+ + +G ED F K+ R
Sbjct: 355 LPSLNIREGAIDILIRLYRKALHNTKDYLTENGVVNLKLVQQLMTDLGKEEDETF-KKWR 413
Query: 301 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHG-SRLAS--GPSPSPYQQSECV 357
+ + E K A ++V+ SL+ V HG +R+ S + +P E
Sbjct: 414 VDELKNEETKIMPANPADAEEVD-TNDTVSLLLVDHQHGDARMPSRDNANKNPADAEEDT 472
Query: 358 GRL-DNGKGTSGRPHKVPRLSSGATIGAAIV 387
RL + G HK+ SS A V
Sbjct: 473 VRLWEEGWKKRYYQHKLKVASSDHDFRAQFV 503
Score = 179 bits (455), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 106/241 (43%), Positives = 137/241 (56%), Gaps = 20/241 (8%)
Query: 420 NSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGV 479
N + EED V+L E GWK+RYY+ K K + R V RY EGLCW+ YYY+G
Sbjct: 464 NPADAEEDTVRLWEEGWKKRYYQHKL--KVASSDHDFRAQFVRRYIEGLCWLFRYYYQGC 521
Query: 480 CSWQWFYPYHYAPFASDLK-----DLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPE 533
SW+W++PYHYAPFASD D+D +I+FE G P KP Q + V + LPE
Sbjct: 522 ASWKWYFPYHYAPFASDFLASDFPDIDDLSINFEKGTKPLKPLEQQMIV--GFNRRYLPE 579
Query: 534 HYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEE 593
+ + MTD +SPI DFYP DF +D+NG +Y QG+A LPF+DE RLL + + LT E
Sbjct: 580 TWSRKMTDDDSPIIDFYPEDFHIDLNGNKYPSQGVALLPFVDEDRLLRCLADVYPDLTPE 639
Query: 594 EARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKE---RLNPELSDGMNGY 650
E +RNS + LFV H L I KQL K R++ E ++ L D M G
Sbjct: 640 EKKRNSNGPERLFVDKHHRLYNFI-------KQLYKKNRLKKTEPDIDVHSSLDDVMIGK 692
Query: 651 I 651
I
Sbjct: 693 I 693
Score = 41.2 bits (95), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Query: 568 IAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQL 627
+A LPF+DE RLL + + LT E+ +RNS + LFV H L I L +
Sbjct: 713 VALLPFVDEDRLLRSLADVYPDLTPEDMKRNSNGPERLFVGKRHHLYNFINELYQKNSLE 772
Query: 628 KIKERVEVKERLNPELSDGMNGYI 651
K + ++V+ P L D M G I
Sbjct: 773 KTEPDIDVR----PSLVDAMIGKI 792
>gi|4914494|emb|CAB43711.1| pacman protein [Drosophila melanogaster]
Length = 1613
Score = 213 bits (542), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 119/300 (39%), Positives = 162/300 (54%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR +++A A+ + R E R FDSN ITPGTEFM L
Sbjct: 94 MNQQRSRRFRTAREAEQQEAKAAQ-RGELREHER----------FDSNCITPGTEFMVRL 142
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+ ++ +++ DP W++ VILS PGEGEHKIM Y+R + P YDPNTRHCLY
Sbjct: 143 QEGLRAFLKTKISTDPLWQRCTVILSGQEAPGEGEHKIMDYIRYMKTQPDYDPNTRHCLY 202
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLI+L L THE+HF +LRE V +F
Sbjct: 203 GLDADLIILGLCTHELHFVVLREEV-------------------------------KFGR 231
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEF-RIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
V + + LH+ LREYL+ EF + ++D+ ++DD++ M F VGNDF+P
Sbjct: 232 NVKRTSVEETRFFLLHLGLLREYLELEFDALRTDEHKLDIAQLIDDWVLMGFLVGNDFIP 291
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P L I A+ LL Y + LGG + + K +LRR++ FI A+ E F++ A
Sbjct: 292 HLPCLHISSNALPLLYRTYIGIYPTLGGNINENGKLNLRRLQIFISALTEVELDHFKEHA 351
Score = 166 bits (421), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 74/164 (45%), Positives = 103/164 (62%), Gaps = 3/164 (1%)
Query: 435 GWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA 494
+K +Y KF + +E +++ Y L WV+ YYY GV SW W+YP+HY PF
Sbjct: 413 NYKRNFYRNKFKR---DPNDELIEELCHHYVNALQWVLDYYYRGVQSWDWYYPFHYTPFI 469
Query: 495 SDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDF 554
SDLK+++Q I+F +G PF PF QLL V P+AS+ LP Y LM P SP+++FYP +F
Sbjct: 470 SDLKNIEQVEIAFHMGTPFLPFQQLLAVLPAASAKLLPVAYHDLMLLPTSPLAEFYPLEF 529
Query: 555 EVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
E D+NGK++ W+ + +PFIDE RLL + E L+ EE RN
Sbjct: 530 ESDLNGKKHDWEAVVLIPFIDEGRLLAAMLPCEAQLSLEERERN 573
>gi|170043138|ref|XP_001849256.1| 5'-3' exoribonuclease 1 [Culex quinquefasciatus]
gi|167866570|gb|EDS29953.1| 5'-3' exoribonuclease 1 [Culex quinquefasciatus]
Length = 1609
Score = 213 bits (542), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 118/297 (39%), Positives = 168/297 (56%), Gaps = 42/297 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++++A + ++ E++G LP ++ FDSN ITPGT FM L
Sbjct: 94 MNQQRGRRFRSAREAQEQV-------EQAEKKGDVLPLEAR---FDSNCITPGTSFMVRL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
AL+++I ++++ +P W+ KV+LS PGEGEHKIM Y+R + PG+D NTRHCLY
Sbjct: 144 QRALEHFIKVKVSTNPLWKHCKVVLSGHETPGEGEHKIMEYIRHAKASPGFDSNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L THE HFS+LRE V K G+ D+
Sbjct: 204 GLDADLIMLGLCTHERHFSLLREEV----------------------------KFGKNDK 235
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFL 238
K +V + + LH+ LREYL+ EF FE + ++DD++ M + VGNDF+
Sbjct: 236 KSS--IVEETRFYLLHLTLLREYLELEFAPVRDKLKFEFNPYKLIDDWVLMGYMVGNDFI 293
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 295
PH+P L I E A+ L Y L GY+ +G +L R+E ++ + ++ IF
Sbjct: 294 PHLPNLHINENALPTLFQAYMDVLPGLDGYINEGGILNLERLEVLMERLARFDRDIF 350
Score = 171 bits (434), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/257 (37%), Positives = 140/257 (54%), Gaps = 21/257 (8%)
Query: 392 SFETDPQENKEEFKAKLKELLRDKSDAFNSDNPE-----------EDKVKLGE---PGWK 437
+F+ +E K + L L++ D F D+ + E+ +L E +K
Sbjct: 371 AFDVTLEEIKADMDMDLSALIKASEDMFLDDDEDGGGERYSTEDIENDPELFEKEFAAYK 430
Query: 438 ERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDL 497
YY K + EETR + Y L W + YYY GV SW W+YP+HYAPF SD+
Sbjct: 431 RNYYMTKMGYG--DFNEETRAEQAECYIRALQWTLLYYYRGVSSWAWYYPHHYAPFISDV 488
Query: 498 KDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVD 557
++ ++FE+G PF PF QLL V P+AS LP Y KLMTDP+S + D+YP +F D
Sbjct: 489 QNFKNIKLNFEMGKPFLPFQQLLSVLPAASKDHLPTAYHKLMTDPDSSVIDYYPENFGTD 548
Query: 558 MNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASI 617
+NGK+ +W+ + +PFIDE RLL ++ + LT+EE +RN + M+ SA +
Sbjct: 549 LNGKQQAWEAVVLIPFIDEKRLLKAMEPCDAFLTDEEKQRN-VHGPMMLFQYDEQGSAFL 607
Query: 618 ---YTLDEHCKQLKIKE 631
Y LD+ +LK+KE
Sbjct: 608 GANYGLDD-VAELKVKE 623
>gi|24643245|ref|NP_523408.2| pacman, isoform A [Drosophila melanogaster]
gi|7293586|gb|AAF48958.1| pacman, isoform A [Drosophila melanogaster]
gi|15291661|gb|AAK93099.1| LD22664p [Drosophila melanogaster]
Length = 1612
Score = 213 bits (542), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 119/300 (39%), Positives = 162/300 (54%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR +++A A+ + R E R FDSN ITPGTEFM L
Sbjct: 94 MNQQRSRRFRTAREAEQQEAKAAQ-RGELREHER----------FDSNCITPGTEFMVRL 142
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+ ++ +++ DP W++ VILS PGEGEHKIM Y+R + P YDPNTRHCLY
Sbjct: 143 QEGLRAFLKTKISTDPLWQRCTVILSGQEAPGEGEHKIMDYIRYMKTQPDYDPNTRHCLY 202
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLI+L L THE+HF +LRE V +F
Sbjct: 203 GLDADLIILGLCTHELHFVVLREEV-------------------------------KFGR 231
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEF-RIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
V + + LH+ LREYL+ EF + ++D+ ++DD++ M F VGNDF+P
Sbjct: 232 NVKRTSVEETRFFLLHLGLLREYLELEFDALRTDEHKLDIAQLIDDWVLMGFLVGNDFIP 291
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P L I A+ LL Y + LGG + + K +LRR++ FI A+ E F++ A
Sbjct: 292 HLPCLHISSNALPLLYRTYIGIYPTLGGNINENGKLNLRRLQIFISALTEVELDHFKEHA 351
Score = 166 bits (421), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 74/164 (45%), Positives = 103/164 (62%), Gaps = 3/164 (1%)
Query: 435 GWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA 494
+K +Y KF + +E +++ Y L WV+ YYY GV SW W+YP+HY PF
Sbjct: 413 NYKRNFYRNKFKR---DPNDELIEELCHHYVNALQWVLDYYYRGVQSWDWYYPFHYTPFI 469
Query: 495 SDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDF 554
SDLK+++Q I+F +G PF PF QLL V P+AS+ LP Y LM P SP+++FYP +F
Sbjct: 470 SDLKNIEQVEIAFHMGTPFLPFQQLLAVLPAASAKLLPVAYHDLMLLPTSPLAEFYPLEF 529
Query: 555 EVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
E D+NGK++ W+ + +PFIDE RLL + E L+ EE RN
Sbjct: 530 ESDLNGKKHDWEAVVLIPFIDEGRLLAAMLPCEAQLSLEERERN 573
>gi|281361106|ref|NP_001162796.1| pacman, isoform B [Drosophila melanogaster]
gi|272506169|gb|ACZ95330.1| pacman, isoform B [Drosophila melanogaster]
Length = 1613
Score = 213 bits (542), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 119/300 (39%), Positives = 162/300 (54%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR +++A A+ + R E R FDSN ITPGTEFM L
Sbjct: 94 MNQQRSRRFRTAREAEQQEAKAAQ-RGELREHER----------FDSNCITPGTEFMVRL 142
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+ ++ +++ DP W++ VILS PGEGEHKIM Y+R + P YDPNTRHCLY
Sbjct: 143 QEGLRAFLKTKISTDPLWQRCTVILSGQEAPGEGEHKIMDYIRYMKTQPDYDPNTRHCLY 202
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLI+L L THE+HF +LRE V +F
Sbjct: 203 GLDADLIILGLCTHELHFVVLREEV-------------------------------KFGR 231
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEF-RIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
V + + LH+ LREYL+ EF + ++D+ ++DD++ M F VGNDF+P
Sbjct: 232 NVKRTSVEETRFFLLHLGLLREYLELEFDALRTDEHKLDIAQLIDDWVLMGFLVGNDFIP 291
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P L I A+ LL Y + LGG + + K +LRR++ FI A+ E F++ A
Sbjct: 292 HLPCLHISSNALPLLYRTYIGIYPTLGGNINENGKLNLRRLQIFISALTEVELDHFKEHA 351
Score = 166 bits (420), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 74/164 (45%), Positives = 103/164 (62%), Gaps = 3/164 (1%)
Query: 435 GWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA 494
+K +Y KF + +E +++ Y L WV+ YYY GV SW W+YP+HY PF
Sbjct: 413 NYKRNFYRNKFKR---DPNDELIEELCHHYVNALQWVLDYYYRGVQSWDWYYPFHYTPFI 469
Query: 495 SDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDF 554
SDLK+++Q I+F +G PF PF QLL V P+AS+ LP Y LM P SP+++FYP +F
Sbjct: 470 SDLKNIEQVEIAFHMGTPFLPFQQLLAVLPAASAKLLPVAYHDLMLLPTSPLAEFYPLEF 529
Query: 555 EVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
E D+NGK++ W+ + +PFIDE RLL + E L+ EE RN
Sbjct: 530 ESDLNGKKHDWEAVVLIPFIDEGRLLAAMLPCEAQLSLEERERN 573
>gi|410924239|ref|XP_003975589.1| PREDICTED: 5'-3' exoribonuclease 1-like [Takifugu rubripes]
Length = 1673
Score = 213 bits (541), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 117/299 (39%), Positives = 172/299 (57%), Gaps = 40/299 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A EE++++ ++ G LP ++ FDSN ITPGT+FMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EEKIKKALDK-GEVLPTEAR---FDSNCITPGTDFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y++H +++ D W+ ++V LS PGEGEHKIM ++R + P +DPNTRHCLY
Sbjct: 144 QEQLEYFVHNKVSTDKLWQNVRVYLSGHETPGEGEHKIMEFIRSENIKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE +FS+LRE V G+ K++++ +E
Sbjct: 204 GLDADLIMLGLTSHEPNFSLLREEVRFGGK-------------------KSQKRITAPEE 244
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPF--EIDLECIVDDFIFMCFFVGNDFL 238
+ LH+ +REY+DYEF + D E I+DD+I M F VGNDF+
Sbjct: 245 TT---------FHLLHLSLMREYIDYEFSVLRNHLGSNYDFERIIDDWILMGFLVGNDFI 295
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
PH+P L I A+ LL Y +LGGYL + +L+ E +++ + ++ F +
Sbjct: 296 PHLPHLHISHDALPLLYKTYISVLPSLGGYLNENGNLNLKNFEKYMEKLSEFDREHFSE 354
Score = 169 bits (429), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 71/136 (52%), Positives = 95/136 (69%)
Query: 464 YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVF 523
Y EG+ W++HYYY GV SW W+YPYHYAPF SD+K++ + ++F+LG PF PF QLL V
Sbjct: 452 YVEGIQWILHYYYHGVQSWSWYYPYHYAPFLSDIKNVAELKLTFDLGKPFMPFQQLLAVL 511
Query: 524 PSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEV 583
P+AS LPE YR LM NSPI ++YP DF+ D+NGK+ W+ + +PFIDE LL +
Sbjct: 512 PAASMELLPEAYRHLMNSENSPIIEYYPHDFKTDLNGKQQEWEAVVLIPFIDERCLLAAM 571
Query: 584 KKIEHTLTEEEARRNS 599
+ H LT++E RN
Sbjct: 572 EPWNHQLTKQERSRNC 587
>gi|298713577|emb|CBJ27105.1| dhm exonuclease [Ectocarpus siliculosus]
Length = 709
Score = 213 bits (541), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 123/304 (40%), Positives = 173/304 (56%), Gaps = 42/304 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR+SK+A + AE R+G KLP + FDSN ITPGT+FM L
Sbjct: 226 MNQQRSRRFRSSKEAEVNMAEM------VMRDG-KLP---EVTRFDSNCITPGTDFMFKL 275
Query: 61 SIALQYYIHLRLNNDPGWEK-IKVILSDANVPGEGEHKIMSYVRLQRNL-PGYDPNTRHC 118
+ A Q +I +++ DP W++ +V+ S +VPGEGEHK+M Y+R R P + + RHC
Sbjct: 276 TKAFQAWIEYKMDTDPFWQQNARVVFSGPDVPGEGEHKVMDYIREARETEPDWRDDLRHC 335
Query: 119 LYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEF 178
LYGLDADLIML+L THE HFS+LRE K +
Sbjct: 336 LYGLDADLIMLSLVTHEKHFSLLRE--------------------------KMSVRHSRR 369
Query: 179 DEKGDEVVVPKKPYQFLHIWTLREYLDYEFRI----PNPPFEIDLECIVDDFIFMCFFVG 234
+ D + + ++ + + LRE L +F+ P PF+ +LE ++DDF+FMC VG
Sbjct: 370 KKPKDPITYTRNDFELMEVSLLREMLRLQFQSQANDPKLPFKFELERVIDDFVFMCILVG 429
Query: 235 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI 294
NDFLP++P L+I +GA+N +M +YK +GGYLT + R+E F+ V E
Sbjct: 430 NDFLPNVPHLDISDGALNHMMNMYKLLLPKMGGYLTKKDQIHHGRLEMFMHEVSRREAMY 489
Query: 295 FQKR 298
F++R
Sbjct: 490 FRRR 493
Score = 159 bits (403), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 85/194 (43%), Positives = 116/194 (59%), Gaps = 6/194 (3%)
Query: 408 LKELLRDKSDAFNSDNPEEDKVKLGEPG-WKERYYEEKFNAKTPEEREETRKDVVLRYTE 466
+ E+ R ++ F EE + L +PG + +RYY+ K + PE+ EE R VV Y E
Sbjct: 479 MHEVSRREAMYFRRRGVEESDLVLQDPGKYTDRYYKTKLDLD-PEQEEEKRA-VVKHYLE 536
Query: 467 GLCWVMHYYYEGV---CSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVF 523
GL WV+ YY+ GV SW W+YP+ YAP AS +K+L +ISFE G PF QLL V
Sbjct: 537 GLYWVLKYYHVGVDAGGSWSWYYPHLYAPLASSMKNLMDIDISFEKGRPFPNLLQLLSVL 596
Query: 524 PSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEV 583
P S+ LPE Y+ LM +P SPI ++YPT+FE D NGK SW+ + K+PFIDE + +
Sbjct: 597 PPQSADFLPEPYKALMVEPTSPILEYYPTEFECDANGKTASWETVVKIPFIDEKDVFGAL 656
Query: 584 KKIEHTLTEEEARR 597
++HT E R
Sbjct: 657 SNVDHTKDLEAVDR 670
>gi|367035618|ref|XP_003667091.1| hypothetical protein MYCTH_109078 [Myceliophthora thermophila ATCC
42464]
gi|347014364|gb|AEO61846.1| hypothetical protein MYCTH_109078 [Myceliophthora thermophila ATCC
42464]
Length = 561
Score = 213 bits (541), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 109/194 (56%), Positives = 135/194 (69%), Gaps = 11/194 (5%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDS------QVFDSNVITPGT 54
MNQQRSRRFRA++DA + +++L + ++E K +S + FDSN ITPGT
Sbjct: 112 MNQQRSRRFRAAQDAKEKEEGKQQLLKMLKKENGSDATKEESVEAVVKKAFDSNSITPGT 171
Query: 55 EFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPN 114
FM +L+ +L+Y+ +LN DP W K+KVI+SDA VPGEGEHKIM +VR QRN P +DPN
Sbjct: 172 PFMDILAASLRYWCAYKLNTDPAWAKLKVIISDATVPGEGEHKIMEFVRSQRNSPEHDPN 231
Query: 115 TRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDK---CFLCGQPGHLAANCEGKA 171
TRH +YGLDADLIML LATHE HF +LRE VF QQ K C LCGQ GH NC+G+A
Sbjct: 232 TRHVIYGLDADLIMLGLATHEPHFRVLREDVFF--QQSKPRLCKLCGQTGHDERNCKGEA 289
Query: 172 KRKAGEFDEKGDEV 185
K K G+ DEKG V
Sbjct: 290 KEKNGDLDEKGKGV 303
>gi|358342156|dbj|GAA49686.1| 5'-3' exoribonuclease 2 [Clonorchis sinensis]
Length = 314
Score = 213 bits (541), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 128/175 (73%), Gaps = 2/175 (1%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAV 59
MNQQRSRRFRA+K+A + ERLR E + G LPP KS+ + FDSN ITPGT FMA
Sbjct: 113 MNQQRSRRFRAAKEAKEKHMTIERLRNELQARGAHLPPAKSEEEHFDSNCITPGTPFMAR 172
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
L++AL+YYI+ RLN+DPGW+ I V LSDANVPGEGEHKIM ++R QR+ P +D NTRHCL
Sbjct: 173 LAVALRYYIYDRLNSDPGWKNIMVFLSDANVPGEGEHKIMDFIRRQRSAPDHDANTRHCL 232
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRK 174
G DADLIML LATHE +F+I+RE F P Q C LCGQ GH +C G K +
Sbjct: 233 CGADADLIMLGLATHEPYFTIIRE-EFKPNQPKPCDLCGQIGHEMEDCVGAPKEE 286
>gi|328850703|gb|EGF99864.1| hypothetical protein MELLADRAFT_68240 [Melampsora larici-populina
98AG31]
Length = 406
Score = 213 bits (541), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 105/186 (56%), Positives = 139/186 (74%), Gaps = 7/186 (3%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLR--QEFEREGRKLPP--KSDSQVFDSNVITPGTEF 56
MNQQRSRRFRA+++A EE +L +E++ G++L KSD + +DSN ITPGT F
Sbjct: 110 MNQQRSRRFRAAQEA--QTKEEAKLAAIEEWKTMGKELSEEFKSDKKAWDSNAITPGTPF 167
Query: 57 MAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTR 116
M +L+ +L+Y+I ++N DPGW++I+VILSDA+VPGEGEHKIM ++R QR YDPNT
Sbjct: 168 MTLLTESLRYWIVHKMNTDPGWKQIQVILSDASVPGEGEHKIMDFIRRQRTHSSYDPNTS 227
Query: 117 HCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKRKA 175
H +YGLDADLIML+LATHE HF +LRE VF ++ + C+ CGQPGH ++ C+GK K KA
Sbjct: 228 HVIYGLDADLIMLSLATHEPHFKVLREDVFADQKKGRGCYTCGQPGHHSSQCQGKPKEKA 287
Query: 176 GEFDEK 181
EFD K
Sbjct: 288 DEFDIK 293
>gi|50293237|ref|XP_449030.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528343|emb|CAG62000.1| unnamed protein product [Candida glabrata]
Length = 1522
Score = 212 bits (539), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 122/298 (40%), Positives = 173/298 (58%), Gaps = 41/298 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR + D E+ Q+ EG ++P K D+ FDSN ITPGTEFMA L
Sbjct: 95 MNQQRSRRFRTAMDT-------EKALQKAMDEGEEIP-KGDA--FDSNCITPGTEFMAQL 144
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L YYIH ++ ND W I+VILS VPGEGEHKIM ++R YD NTRHC+Y
Sbjct: 145 TRNLNYYIHDKVTNDANWRDIEVILSGHEVPGEGEHKIMDFIRNITAQEDYDVNTRHCIY 204
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L+TH HF++LRE V T G+++ N K
Sbjct: 205 GLDADLIMLGLSTHAPHFALLREEV-TFGRRN-------------NSRNKN--------- 241
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFL 238
+ ++ + LH+ LREYL+ EF+ + FE D E I+DDFI + F +GNDFL
Sbjct: 242 ------LEEQNFYLLHLSLLREYLELEFKEIGDDLQFEFDFENILDDFILVMFVIGNDFL 295
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
P++P L + +GA +L+ +K+ + GY+ + + + +R++ ++ + +E F+
Sbjct: 296 PNLPDLHLNKGAFPVLLQTFKEALLHVDGYINERGQINFKRLKVWLDYLSQFELMNFE 353
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 103/174 (59%), Gaps = 4/174 (2%)
Query: 435 GWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA 494
WK YY KF K E E ++ Y EGL WV++YYY+G SW W+Y +HYAP
Sbjct: 513 NWKAEYYRSKFGIKRDEP--ERIVEIANNYVEGLQWVLYYYYQGCPSWSWYYHFHYAPRI 570
Query: 495 SDL-KDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTD 553
SDL K LDQ I FE G P PF QL+ V P S + LP YR LM DP SPI DFYP++
Sbjct: 571 SDLAKGLDQI-IKFEQGSPLTPFQQLMAVLPERSKNLLPAAYRPLMYDPKSPILDFYPSE 629
Query: 554 FEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
++D NGK W+ + LPF+DE RL++ L+ EE +RNS ++ F+
Sbjct: 630 VQLDKNGKTADWEAVVLLPFVDENRLIEATNHCLAKLSPEEKQRNSFGKNLTFM 683
>gi|448526146|ref|XP_003869280.1| Kem1 5'-->3' exoribonuclease [Candida orthopsilosis Co 90-125]
gi|380353633|emb|CCG23144.1| Kem1 5'-->3' exoribonuclease [Candida orthopsilosis]
Length = 1465
Score = 212 bits (539), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 118/286 (41%), Positives = 166/286 (58%), Gaps = 40/286 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + +A E L++ E G +LP K D FDSN ITPGTEFMA L
Sbjct: 93 MNQQRARRFRTAYEA------EINLKKAIEN-GDELP-KEDP--FDSNSITPGTEFMAKL 142
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y++H ++ D W I+++LS VPGEGEHKI ++R R+ GYDPN RHC+Y
Sbjct: 143 TENLKYFVHKKITEDSRWANIEIVLSGHEVPGEGEHKIQEFIRAVRSQDGYDPNLRHCIY 202
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF++LRE V G K +G D
Sbjct: 203 GLDADLIMLGLVSHDPHFALLREEV---------------------TFGNRKSSSGPKD- 240
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNP--PFEIDLECIVDDFIFMCFFVGNDFL 238
V + + LH+ +REYL+ EF+ FE D E ++DDFI + + +GNDFL
Sbjct: 241 ------VTDQKFFLLHLSLVREYLELEFKEVEEQISFEYDFEKVLDDFILIMYVIGNDFL 294
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFI 284
PH+P L + +GA LL++ +K+ GY+ + K +LRR+ ++
Sbjct: 295 PHLPDLHLNKGAFPLLISTFKQSLLQSDGYINEDGKINLRRLNIWV 340
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/226 (41%), Positives = 131/226 (57%), Gaps = 18/226 (7%)
Query: 397 PQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEP---------GWKERYYEEKFNA 447
P E++E++ ++ EL R ++ + N E + LGE WK YYEEK N
Sbjct: 467 PSESEEDYDERISEL-RKAVKSYQTANLVESQDVLGETKGVYEEKFKSWKNNYYEEKLNF 525
Query: 448 KTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASD----LKDLDQ- 502
+ +E ++ Y EGL WV++YYY G SW ++Y YHYAP SD L++L +
Sbjct: 526 SI--DNKEKLTEMTEHYIEGLQWVLYYYYRGCPSWNFYYRYHYAPRISDISVGLEELIKK 583
Query: 503 -FNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGK 561
+I+FE PFKPF QL+ V P+ S +P YR LMTD SPI FYP + ++DMNGK
Sbjct: 584 GVDITFEKSKPFKPFEQLMAVLPARSKKLMPAVYRPLMTDEKSPIIGFYPHEVDIDMNGK 643
Query: 562 RYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
SW+ + L F+DE +LLD +K IE LT EE +RNS ++ F+
Sbjct: 644 TASWEAVVLLDFVDEKKLLDALKPIESKLTPEETKRNSYGNNIKFI 689
>gi|46124843|ref|XP_386975.1| hypothetical protein FG06799.1 [Gibberella zeae PH-1]
Length = 1370
Score = 212 bits (539), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 125/324 (38%), Positives = 177/324 (54%), Gaps = 56/324 (17%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR + DA E+ R + EG ++P + + FDSN ITPGTEFMA L
Sbjct: 95 MNQQRSRRFRTALDA-------EKARDKAISEGVEIPKE---EPFDSNCITPGTEFMAKL 144
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S L+Y+++ +++ D W+ +++LS VPGEGEHKIM Y+R + P Y+ N RHCLY
Sbjct: 145 SQQLRYFVNKKVSEDTDWQGCEIVLSGHEVPGEGEHKIMEYIRNAKAQPNYNHNVRHCLY 204
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+ +K K+ E +
Sbjct: 205 GLDADLIMLGLLSHDPHFCLLREEV-TFGR-------------------ASKSKSKELEH 244
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNP----PFEIDLECIVDDFIFMCFFVGND 236
+ + LH+ +REYL+ EF+ F DLE ++DDFI M FFVGND
Sbjct: 245 QN---------FYLLHLCIVREYLEMEFQELGEEGALSFPFDLERVIDDFILMAFFVGND 295
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF- 295
FLP++P+L I EGA+ + +YK GY+ + ++ R++ + + + E F
Sbjct: 296 FLPNLPSLHINEGALANMFRIYKSILPKCDGYINENGVINMGRLQRLLGELSNTEIDAFE 355
Query: 296 ------------QKRARLHQRHAE 307
Q RL +HAE
Sbjct: 356 SDVSDEKWYASKQMEKRLENKHAE 379
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 87/173 (50%), Gaps = 35/173 (20%)
Query: 435 GWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA 494
GWK +YY +KF P+ Y + L + Y +GV +
Sbjct: 510 GWKTKYYLQKFEEWAPDS-----------YDKELTAL--YVVKGVGA------------- 543
Query: 495 SDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDF 554
+++F+ G PF P+ QL+GV P S +P+ Y LMT+P+SPI DFYP DF
Sbjct: 544 ---------DLNFKKGQPFLPYEQLMGVLPDRSKKIVPKVYHDLMTNPDSPIVDFYPRDF 594
Query: 555 EVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
E+DMNGK+ W+ + K+PFIDE RLLD ++ L +E RN + F
Sbjct: 595 ELDMNGKKMDWEAVIKIPFIDEKRLLDAMRPKNELLEPDEKARNGFGVPLKFT 647
>gi|408388369|gb|EKJ68055.1| hypothetical protein FPSE_11866 [Fusarium pseudograminearum CS3096]
Length = 1391
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 125/324 (38%), Positives = 177/324 (54%), Gaps = 56/324 (17%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR + DA E+ R + EG ++P + + FDSN ITPGTEFMA L
Sbjct: 95 MNQQRSRRFRTALDA-------EKARDKAISEGVEIPKE---EPFDSNCITPGTEFMAKL 144
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S L+Y+++ +++ D W+ +++LS VPGEGEHKIM Y+R + P Y+ N RHCLY
Sbjct: 145 SQQLRYFVNKKVSEDTDWQGCEIVLSGHEVPGEGEHKIMEYIRNAKAQPNYNHNVRHCLY 204
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+ +K K+ E +
Sbjct: 205 GLDADLIMLGLLSHDPHFCLLREEV-TFGR-------------------ASKSKSKELEH 244
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIP----NPPFEIDLECIVDDFIFMCFFVGND 236
+ + LH+ +REYL+ EF+ F DLE ++DDFI M FFVGND
Sbjct: 245 QN---------FYLLHLCIVREYLEMEFQELGEEGTLSFPFDLERVIDDFILMAFFVGND 295
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF- 295
FLP++P+L I EGA+ + +YK GY+ + ++ R++ + + + E F
Sbjct: 296 FLPNLPSLHINEGALANMFRIYKSILPKCDGYINENGVINMGRLQRLLGELSNTEIDAFE 355
Query: 296 ------------QKRARLHQRHAE 307
Q RL +HAE
Sbjct: 356 NDVSDEKWYASKQMEKRLENKHAE 379
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 94/173 (54%), Gaps = 18/173 (10%)
Query: 435 GWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA 494
GWK +YY +KF P+ ++ + Y +GL WV++YYY V
Sbjct: 511 GWKTKYYLQKFEEWAPDSYDKELTALCENYVQGLQWVLYYYYRDVVK----------GVG 560
Query: 495 SDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDF 554
+DL +F+ G PF P+ QL+GV P S +P+ Y LMT+P+SPI DFYP DF
Sbjct: 561 ADL--------NFKKGQPFLPYEQLMGVLPDRSKKIVPKVYHDLMTNPDSPIVDFYPRDF 612
Query: 555 EVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
E+DMNGK+ W+ + K+PFIDE RLLD ++ L +E RN + F
Sbjct: 613 ELDMNGKKMDWEAVIKIPFIDEKRLLDAMRPKNELLEPDEKARNGFGVPLKFT 665
>gi|239612327|gb|EEQ89314.1| exonuclease Kem1 [Ajellomyces dermatitidis ER-3]
Length = 1440
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 123/300 (41%), Positives = 178/300 (59%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA A+E+ ++Q E PK ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRARRFRTALDA--EVAKEKAIKQGVEM------PKEEA--FDSNCITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+I+ +++ D W+ ++++LS VPGEGEHKIM Y+R + PGY P+ RHCLY
Sbjct: 144 TQQLKYFINKKVSEDVEWQGVEIVLSGHEVPGEGEHKIMEYIRQSKAQPGYHPDVRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+Q +++K+ E +
Sbjct: 204 GLDADLIMLGLLSHDPHFCLLREEV-TFGRQ-------------------SQKKSKELEH 243
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGND 236
+ + +H+ +REYL+ EF+ F DLE ++DDFI M FFVGND
Sbjct: 244 QN---------FYLMHLCMVREYLELEFQELEEADALQFPFDLERVIDDFILMAFFVGND 294
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP++P L I EGA+ + +YK+ LGGY+ + +L R+ + ++ E R F+
Sbjct: 295 FLPNLPNLHINEGALAWMFKIYKQVLPKLGGYINEQGTINLERLGVLLDSLSDVEFRFFE 354
Score = 179 bits (455), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 90/202 (44%), Positives = 120/202 (59%), Gaps = 7/202 (3%)
Query: 406 AKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYT 465
AK+KE + A + E K +L WK YY+ KF + EE RK + Y
Sbjct: 492 AKVKE-----TTAEEAQQAAEKKYELKFQEWKNDYYKSKFGWGL-DNHEEMRK-LTENYV 544
Query: 466 EGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPS 525
+GL WV++YYY GV SW WFY YHY+P SD+K + +++F+LG PF+PF QL+GV P
Sbjct: 545 QGLQWVLYYYYRGVASWPWFYQYHYSPMISDVKFGLKADMNFDLGQPFRPFEQLMGVLPD 604
Query: 526 ASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKK 585
S +P + +LMT P SPI DFYP DFE+DMNGK+ W+ + K+PFIDE RLL +
Sbjct: 605 RSKQIVPAAFHELMTSPESPIIDFYPRDFELDMNGKKMEWEAVVKIPFIDEKRLLGAMAT 664
Query: 586 IEHTLTEEEARRNSIMADMLFV 607
+H LT E RN + F
Sbjct: 665 KQHLLTPAERARNEFGVTLKFT 686
>gi|55726904|emb|CAH90211.1| hypothetical protein [Pongo abelii]
Length = 402
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 116/294 (39%), Positives = 168/294 (57%), Gaps = 43/294 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HF +LRE V G+
Sbjct: 204 GLDADLIMLGLTSHEAHFPLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF
Sbjct: 234 KTQRVCAPEETTFHLLHLSLMREYIDYEFSLLKEKITFKYDIERIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYE 291
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++
Sbjct: 294 IPHLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFD 347
>gi|327267071|ref|XP_003218326.1| PREDICTED: 5'-3' exoribonuclease 1-like [Anolis carolinensis]
Length = 1744
Score = 210 bits (535), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 116/298 (38%), Positives = 168/298 (56%), Gaps = 43/298 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKALEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + V LS PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTVYLSGHETPGEGEHKIMEFIRSEKTKPDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLI+L L +HE HFS+LRE V G+
Sbjct: 204 GLDADLIILGLTSHEPHFSLLREEVRFGGK------------------------------ 233
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF F ++E I+DD+I M F VGNDF
Sbjct: 234 KSQRVCAPEETTFHLLHLSLMREYIDYEFSPVKTKIKFPYEIEKIIDDWILMGFLVGNDF 293
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 295
+PH+P L I A+ +L Y L GY+ + +L R E ++ + ++ F
Sbjct: 294 IPHLPHLHINHDALPMLYRTYMAVLPELEGYINEKGHLNLPRFEKYLAKLSDFDREHF 351
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 108/178 (60%), Gaps = 3/178 (1%)
Query: 422 DNPEEDKVKLGE-PGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVC 480
D PEED + E +K YY K + + + D Y + + W++HYYY GV
Sbjct: 420 DEPEEDDLFETEFRQYKRAYYMTKMGVEVVSD--DFLADQAKCYVQAIQWILHYYYHGVQ 477
Query: 481 SWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMT 540
SW W+YPYHYAP+ SD++ + I +L PF PF QLL V P+AS LP+ Y+ LMT
Sbjct: 478 SWSWYYPYHYAPYLSDIRKIGDLKIYLDLEKPFMPFEQLLAVLPAASKDLLPKCYQHLMT 537
Query: 541 DPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
+SPI D+YPT+F+ D+NGK+ W+ + +PFIDE +LL+ ++ LT EE +RN
Sbjct: 538 SEDSPIIDYYPTEFKTDLNGKQQEWEAVVLIPFIDEKQLLEAMEPCNKLLTTEERQRN 595
>gi|452822189|gb|EME29211.1| 5'-3' exoribonuclease [Galdieria sulphuraria]
Length = 571
Score = 210 bits (535), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 126/303 (41%), Positives = 166/303 (54%), Gaps = 43/303 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR++KDA + AE +E + R FDSN ITPGTEFM VL
Sbjct: 92 MNQQRSRRFRSAKDAEKALAEAIERGEEIKSSSR----------FDSNCITPGTEFMHVL 141
Query: 61 SIALQYYIHLRLNNDPGWEK-IKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
S + +I +DP W++ +I S +VPGEGEHKIM ++R + +HCL
Sbjct: 142 SQRFKDWISFMTTHDPAWQQGCDIIFSGPDVPGEGEHKIMDFIRTHTEDKEW-TERKHCL 200
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
YGLDADLIML L TH HFS+LRE ++ +G+A + F+
Sbjct: 201 YGLDADLIMLGLVTHFPHFSLLRE-----------------KYVIQKKDGEANKPKFFFE 243
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFR---IPNPPFEIDLECIVDDFIFMCFFVGND 236
E + FL + LR+ L EF+ F DLE +VDDF+FMC FVGND
Sbjct: 244 E-----------FHFLQLALLRDMLYLEFKPFGDTELSFAYDLERVVDDFVFMCIFVGND 292
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP++P L+I GA+N++ AVYK +GGYLT+ + +R E F+Q V E FQ
Sbjct: 293 FLPNLPHLDINTGALNVMFAVYKSLLPQMGGYLTERHRIHPKRTEWFLQQVAKAERAYFQ 352
Query: 297 KRA 299
RA
Sbjct: 353 YRA 355
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 112/177 (63%), Gaps = 8/177 (4%)
Query: 429 VKLGEPG-----WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQ 483
V+ EPG +K YY+ K + EE + R ++ +Y EGL +++ YYY+G SW+
Sbjct: 356 VEENEPGFLGDEYKSYYYQSKLGIRMEEEPHKVR-ELCQKYYEGLHFILQYYYQGCPSWK 414
Query: 484 WFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPN 543
WFYP YAP ASD+ L++ + FE GHPF+P QLL V P SS LPE R LM
Sbjct: 415 WFYPSFYAPLASDMVQLEEIRVEFEQGHPFRPLTQLLAVLPPESSSFLPEPLRNLMISDL 474
Query: 544 SPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIE--HTLTEEEARRN 598
SP++++YP DFEVD+NGKR SW+ I +PFIDE RLL+ + ++ LT+EE RN
Sbjct: 475 SPLNEYYPPDFEVDLNGKRNSWEAIVLIPFIDENRLLNALATVDTRTELTDEERCRN 531
>gi|198471055|ref|XP_001355485.2| GA17195 [Drosophila pseudoobscura pseudoobscura]
gi|198145746|gb|EAL32544.2| GA17195 [Drosophila pseudoobscura pseudoobscura]
Length = 1533
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 116/302 (38%), Positives = 169/302 (55%), Gaps = 47/302 (15%)
Query: 1 MNQQRSRRFRASKDA--ADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMA 58
MNQQRSRRFR++++A ++ A + R+E ER FDSN ITPGT+FM
Sbjct: 94 MNQQRSRRFRSAREAEMLEAKALQRGERREHER-------------FDSNCITPGTDFME 140
Query: 59 VLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHC 118
L L+ ++ +++ DP W+K VILS PGEGEHKIM Y+R + P +DPNTRHC
Sbjct: 141 RLQQGLRCFLKTKISTDPLWQKCSVILSGQETPGEGEHKIMDYIRYMKAQPNFDPNTRHC 200
Query: 119 LYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEF 178
LYGLDADLI+L L THE+HF +LRE V +F
Sbjct: 201 LYGLDADLIILGLCTHELHFVVLREEV-------------------------------KF 229
Query: 179 DEKGDEVVVPKKPYQFLHIWTLREYLDYEF-RIPNPPFEIDLECIVDDFIFMCFFVGNDF 237
V + + LH+ LREYL+ EF ++ ++D+ ++DD++ M F VGNDF
Sbjct: 230 GRNVKRASVEETRFFLLHLGLLREYLELEFHQLNTAQHKLDVAQLIDDWVLMGFMVGNDF 289
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y + + +LGG + + K +L+R++ F+ A+ E +++
Sbjct: 290 IPHLPCLHISSNALPLLYKTYIRIYHSLGGNINEHGKLNLQRLQIFMTALSEVELEQYKE 349
Query: 298 RA 299
A
Sbjct: 350 HA 351
Score = 165 bits (418), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 84/207 (40%), Positives = 122/207 (58%), Gaps = 10/207 (4%)
Query: 399 ENKEEFKAKLKELLRDKSDAFNSDNPEEDK-----VKLGEPGWKERYYEEKFN--AKTPE 451
++ +++ + LK L+ D + +N D+ E+ V +K YY KFN ++ P
Sbjct: 372 DSSKDYDSDLKALIDDSTQLYNDDSDEDLSDEEAGVLKDFQNYKRNYYRNKFNLSSRPPN 431
Query: 452 EREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGH 511
+ E ++ Y L W++ YYY GV SW W+YP+HYAPF SDL ++ I F+LG
Sbjct: 432 QLIE---ELGHHYVTALQWILDYYYRGVQSWDWYYPFHYAPFISDLNNIATVQIKFQLGT 488
Query: 512 PFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKL 571
PF PF QLLGV P+AS LP Y LM P SP+++FYPTDF+ D+NGK++ W+ + +
Sbjct: 489 PFLPFEQLLGVLPAASFKLLPNAYHDLMLKPTSPLAEFYPTDFKSDLNGKKHDWEAVVLI 548
Query: 572 PFIDEARLLDEVKKIEHTLTEEEARRN 598
PFIDE LL ++ E L+ E RN
Sbjct: 549 PFIDECLLLSVMRPCEAHLSTAERARN 575
>gi|195345705|ref|XP_002039409.1| GM22742 [Drosophila sechellia]
gi|194134635|gb|EDW56151.1| GM22742 [Drosophila sechellia]
Length = 1585
Score = 209 bits (533), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 119/329 (36%), Positives = 177/329 (53%), Gaps = 51/329 (15%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR++++A ++ E + + + + FDSN ITPGT FM L
Sbjct: 94 MNQQRSRRFRSAREA-----------EQLETKAAQRGEWREHERFDSNCITPGTVFMGRL 142
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+ ++ +++ DP W++ VILS VPGEGEHKIM Y+R + P +DPNTRHC+Y
Sbjct: 143 QKGLRAFLKTKISTDPLWQRCSVILSGQEVPGEGEHKIMDYIRYMKAQPDFDPNTRHCIY 202
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLI+L L THE+HF +LRE V +F
Sbjct: 203 GLDADLIILGLCTHELHFVVLREEV-------------------------------KFGR 231
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEF-RIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
V + + LH+ LREYL+ EF + ++D+ ++DD++ M F VGNDF+P
Sbjct: 232 NVKRTSVEETRFFLLHLGLLREYLELEFDALRTVEHKLDVAQLIDDWVLMGFLVGNDFIP 291
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P L I A+ LL Y + + LGG + + K +LRR++ F+ A+ E F++
Sbjct: 292 HLPCLHISSNALPLLYRTYIRIYPTLGGNINENGKLNLRRLQIFMSALTEVELEHFKE-- 349
Query: 300 RLHQRHAERIKREKAQARRGD-DVEPLAQ 327
HA+ IK ++ D DV+ + +
Sbjct: 350 -----HADEIKYMNSKTDTFDTDVDEITE 373
Score = 167 bits (422), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 106/164 (64%), Gaps = 3/164 (1%)
Query: 435 GWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA 494
+K +Y KF + + + +++ Y L WV+ YYY GV SW W+YP+HY+PF
Sbjct: 412 NYKRNFYRNKFKR---DPQSDLLEELGHHYVNALQWVLDYYYRGVQSWDWYYPFHYSPFI 468
Query: 495 SDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDF 554
SDLK+++Q I+F LG PF PF QLL V P+AS+ LP Y LM P+SP++DFYP +F
Sbjct: 469 SDLKNIEQVEIAFHLGTPFLPFQQLLAVLPAASAKLLPVAYHDLMLLPSSPLADFYPLEF 528
Query: 555 EVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
E D+NGK++ W+ + +PFIDE RLL+ + E L+ EE RN
Sbjct: 529 ESDLNGKKHDWEAVVLIPFIDERRLLNAMLPCEAQLSLEERERN 572
>gi|354545919|emb|CCE42648.1| hypothetical protein CPAR2_202910 [Candida parapsilosis]
Length = 1481
Score = 209 bits (532), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 117/286 (40%), Positives = 165/286 (57%), Gaps = 40/286 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + +A E L++ E G +LP K D FDSN ITPGTEFMA L
Sbjct: 93 MNQQRARRFRTAYEA------EINLKKAIEN-GDELP-KEDP--FDSNSITPGTEFMAKL 142
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y++H ++ D W I+++LS VPGEGEHKI ++R R+ YDPN RHC+Y
Sbjct: 143 TENLKYFVHKKITEDSRWANIEIVLSGHEVPGEGEHKIQEFIRAVRSQDDYDPNLRHCIY 202
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF++LRE V G K +G D
Sbjct: 203 GLDADLIMLGLVSHDPHFALLREEV---------------------TFGNRKTSSGPKD- 240
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFL 238
V + + LH+ +REYL+ EF+ FE D E ++DDFI + + +GNDFL
Sbjct: 241 ------VTDQKFYLLHLSLVREYLELEFKEVEEQVDFEYDFEKVLDDFILIMYVIGNDFL 294
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFI 284
PH+P L + +GA LL++ +K+ GY+ + K +LRR+ ++
Sbjct: 295 PHLPDLHLNKGAFPLLLSTFKQSLLQSDGYINEEGKINLRRLNIWV 340
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/226 (40%), Positives = 132/226 (58%), Gaps = 18/226 (7%)
Query: 397 PQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEP---------GWKERYYEEKFNA 447
P E++E++ ++ EL R ++ + N E + LGE WK YYEEK +
Sbjct: 467 PAESEEDYDERISEL-RKTVKSYQAANLVESQDVLGETKGVYEEKFKTWKNNYYEEKLHF 525
Query: 448 KTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASD----LKDLDQ- 502
P + +E ++ Y EGL WV++YYY G SW ++Y YHYAP SD L++L +
Sbjct: 526 --PIDDKEKLIEMTEHYVEGLQWVLYYYYRGCPSWNFYYKYHYAPRISDVSLGLEELIKK 583
Query: 503 -FNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGK 561
+I+FE PFKPF QL+ V P+ S +P Y LMTD SPI DFYP + ++DMNGK
Sbjct: 584 GVDITFEKSKPFKPFEQLMAVLPARSKKLMPAAYWPLMTDEKSPIIDFYPHEVDIDMNGK 643
Query: 562 RYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
SW+ + L F+DE +LLD +K IE LT +E +RNS ++ F+
Sbjct: 644 TASWEAVVLLDFVDEKKLLDALKPIESKLTPQETKRNSYGHNIKFI 689
>gi|336386148|gb|EGO27294.1| hypothetical protein SERLADRAFT_381861 [Serpula lacrymans var.
lacrymans S7.9]
Length = 318
Score = 209 bits (532), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 103/211 (48%), Positives = 142/211 (67%), Gaps = 9/211 (4%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQV-FDSNVITPGTEFMAV 59
MNQQRSRRFR++++A D E+E G+ + ++V +DSN ITPGT FM +
Sbjct: 116 MNQQRSRRFRSAQEAKDKEEARREAVAEWEAMGKTISDDEKNKVAWDSNAITPGTPFMDL 175
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
L+++L+Y++ ++N DPGW+ ++VI+SDA+VPGEGEHKIM ++R QR G+DPN+RH +
Sbjct: 176 LALSLRYWVVQKMNTDPGWKDLQVIISDASVPGEGEHKIMDFIRRQRTNVGHDPNSRHVI 235
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
YGLDADLIMLALATHE HF +LRE VF+ + C +CG+ GH AA C G E
Sbjct: 236 YGLDADLIMLALATHEPHFKVLREDVFSQDKGTGCRICGEEGHYAAQCTGVKT----EIK 291
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRI 210
+ E KKP+ FL + LREYL+ E +
Sbjct: 292 KPPTE----KKPFIFLDVAILREYLEVELDV 318
>gi|195338779|ref|XP_002036001.1| GM16250 [Drosophila sechellia]
gi|194129881|gb|EDW51924.1| GM16250 [Drosophila sechellia]
Length = 431
Score = 209 bits (531), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 121/326 (37%), Positives = 178/326 (54%), Gaps = 26/326 (7%)
Query: 429 VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPY 488
V+L E G+K+RYYE KF+ + + R V L+Y GLCWV+ YYY+G SW W++PY
Sbjct: 16 VRLWEDGFKDRYYESKFDVAPGNQ--QFRYAVALQYVRGLCWVLKYYYQGCASWNWYFPY 73
Query: 489 HYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPIS 547
HYAPFASD ++ + FE G PF P QL+GVFP+ASS +PE + KLM+DP SPI
Sbjct: 74 HYAPFASDFVNIQGLSTMFEKGTKPFNPLEQLMGVFPAASSSHVPEPWAKLMSDPESPII 133
Query: 548 DFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
DFYP DF++D+NGK+++WQG+A LPF+DE RL + LT EE +RN + L++
Sbjct: 134 DFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALVPYYDQLTGEEVKRNKRGDNYLYI 193
Query: 608 LLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI-SPCAGDPHPPVFRSP 666
P H K++K + + DGM G + S + +SP
Sbjct: 194 SNQSP----------HYKKVKKVSEKDDESVCKAISFDGMRGTLGSTELNTAISGILKSP 243
Query: 667 VASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLED-LKPAPVLWHEDSGRR 725
++ + DI N + +K P+ IF K +LE+ + P VL +E SG +
Sbjct: 244 ISGLSDINDNITVTTTFKDPEYDDD-------YIFEAK--RLENAVDPPQVLPNEQSGNK 294
Query: 726 PHENGRHNPHGTISGRQLGEAAHRLV 751
N H ++ + ++ HR++
Sbjct: 295 HRPVIGFNSH--LTRAYVPDSGHRML 318
>gi|301762972|ref|XP_002916907.1| PREDICTED: LOW QUALITY PROTEIN: 5'-3' exoribonuclease 1-like
[Ailuropoda melanoleuca]
Length = 1703
Score = 209 bits (531), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 117/300 (39%), Positives = 169/300 (56%), Gaps = 46/300 (15%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKALEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ G + + S PGEGEHKIM ++R ++ P +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTXQG---VTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLY 200
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE HFS+LRE V G+
Sbjct: 201 GLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------------ 230
Query: 181 KGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDF 237
K V P++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF
Sbjct: 231 KTQRVCAPEETTFHLLHLSLMREYIDYEFSVLKDKITFKYDIERIIDDWILMGFLVGNDF 290
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 291 IPHLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 350
Score = 173 bits (438), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 77/182 (42%), Positives = 111/182 (60%), Gaps = 2/182 (1%)
Query: 417 DAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYY 476
D + ++D + +K YY K + + D Y + + W++HYYY
Sbjct: 411 DNLEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQWILHYYY 468
Query: 477 EGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYR 536
GV SW W+YPYHYAPF SD++++ I FELG PFKPF QLL V P+AS + LP Y+
Sbjct: 469 HGVQSWSWYYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQ 528
Query: 537 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 596
LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +
Sbjct: 529 HLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERK 588
Query: 597 RN 598
RN
Sbjct: 589 RN 590
>gi|336468281|gb|EGO56444.1| hypothetical protein NEUTE1DRAFT_130400 [Neurospora tetrasperma
FGSC 2508]
Length = 513
Score = 208 bits (530), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 103/189 (54%), Positives = 133/189 (70%), Gaps = 10/189 (5%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQV-------FDSNVITPG 53
MNQQRSRRFRA+++A + ++++ + +++ K P+ + V FDSN ITPG
Sbjct: 112 MNQQRSRRFRAAREAMEKEEDKQKFVELLKKQNGK--PQEEEPVEIVVKKAFDSNSITPG 169
Query: 54 TEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDP 113
T FM +L+ +L+Y+ +LN DP W IKVI+SDA VPGEGEHKIM +VR QR P +DP
Sbjct: 170 TPFMDILAASLRYWCSYKLNTDPAWANIKVIISDATVPGEGEHKIMEFVRSQRGSPNHDP 229
Query: 114 NTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAK 172
NTRH +YGLDADLIML LATHE HF +LRE VF + + C +CGQ GH A NC+G+AK
Sbjct: 230 NTRHVIYGLDADLIMLGLATHEPHFRVLREDVFAQDSRPRLCKICGQKGHDAMNCKGEAK 289
Query: 173 RKAGEFDEK 181
K GEFDEK
Sbjct: 290 EKNGEFDEK 298
>gi|301094845|ref|XP_002896526.1| 5'-3' exoribonuclease 1, putative [Phytophthora infestans T30-4]
gi|262109022|gb|EEY67074.1| 5'-3' exoribonuclease 1, putative [Phytophthora infestans T30-4]
Length = 1480
Score = 208 bits (529), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 113/301 (37%), Positives = 171/301 (56%), Gaps = 33/301 (10%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
+NQQRSRRFRA D + +E ++ + + E KS + FDSN ITPGTEF++ L
Sbjct: 97 LNQQRSRRFRAGLDRQQAMDKERHMQIKLQDEKDGHKAKSVASKFDSNCITPGTEFLSKL 156
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S L Y++ ++ +DP W +++V S + VPGEGEHKI+ ++R ++ Y+ N RHC+Y
Sbjct: 157 SQHLVYFVRQKMKSDPLWARLEVFFSGSEVPGEGEHKIVEFIRHRKMTDDYEANLRHCMY 216
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADL++L L THE HF+++RE V K AK+
Sbjct: 217 GSDADLMLLGLMTHEPHFTLVRETVVWGSHHKKV---------------AAKQ------- 254
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
+ ++ +Q +H+ REYL E R+ +P +D E ++DDFI + F +GNDF+PH
Sbjct: 255 ------IEEQQWQLVHLSLFREYLMMEMRVQSP---LDGERMLDDFILLTFLLGNDFIPH 305
Query: 241 MPTLEIREGAINLLMAVYKKEFRA-LGGYLT-DGSKPSLRRVEHFIQAVGSYEDRIFQKR 298
PTLEI E AI LL+ VY++ G YLT +G +++ ++ +G+ E+ I R
Sbjct: 306 SPTLEISEDAIPLLLKVYRELLETHQGSYLTLNGKITNVKLLQELFHVIGNQEEEILINR 365
Query: 299 A 299
A
Sbjct: 366 A 366
Score = 143 bits (360), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 66/145 (45%), Positives = 89/145 (61%), Gaps = 8/145 (5%)
Query: 464 YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQF--NISFE----LGHPFKPFN 517
Y E L W + YY++G SW W+YPYHYAP SDL D+++ N+ F+ + P PF
Sbjct: 488 YMEALVWCLAYYFQGPQSWAWYYPYHYAPMVSDLTDIEEMIGNVKFDEDPSIAGPLLPFE 547
Query: 518 QLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEA 577
QL+ P++SS+ +PE YR LM P SPI FYP F +DM GKR +W+G+ LPFID A
Sbjct: 548 QLMSNLPASSSNLVPESYRFLMVSPVSPIKHFYPETFAIDMEGKRNAWEGVNLLPFIDVA 607
Query: 578 RLLDEVKKI--EHTLTEEEARRNSI 600
L + + + LTE E RRN +
Sbjct: 608 LLKQAIAQFCPDSQLTEAERRRNKL 632
>gi|32766355|gb|AAH55175.1| Zgc:63635 protein [Danio rerio]
Length = 510
Score = 208 bits (529), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 167/288 (57%), Gaps = 42/288 (14%)
Query: 7 RRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQY 66
RRFR++K+A EE++++ E+ G LP ++ FDSN ITPGT+FMA L L+Y
Sbjct: 11 RRFRSAKEA------EEKIKKALEK-GEVLPTEAR---FDSNCITPGTDFMARLQEQLKY 60
Query: 67 YIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADL 126
++H +L+ D W+ + V LS PGEGEHKIM ++R + PG++PNTRHCLYGLDADL
Sbjct: 61 FVHNKLSTDKTWQGVNVYLSGHETPGEGEHKIMEFIRSESTKPGHNPNTRHCLYGLDADL 120
Query: 127 IMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVV 186
IML L +HE HFS+LRE V G++ + KR +
Sbjct: 121 IMLGLTSHEPHFSLLREEVRFGGKKSQ------------------KR-----------IT 151
Query: 187 VPKK-PYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPT 243
P++ + LH+ +REY+DYEF FE DLE I+DD++ M F VGNDF+PH+P
Sbjct: 152 APEETTFHLLHLSLMREYIDYEFSELRKKISFEYDLERIIDDWVLMGFLVGNDFIPHLPH 211
Query: 244 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYE 291
L I A+ LL Y +LGGYL + +L E +++ + ++
Sbjct: 212 LHINHDALPLLYRTYINVLPSLGGYLNENGHLNLTHFEKYLEKLSDFD 259
Score = 149 bits (376), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 99/161 (61%), Gaps = 2/161 (1%)
Query: 415 KSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 474
+++ D ++D + +K YY K + + E + Y EG+ W++HY
Sbjct: 325 RAEGAEEDGEDDDMFETEFRQYKRTYYMTKMGVEVVSD--EFLANQAKCYVEGIQWILHY 382
Query: 475 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEH 534
YY GV SW W+YPYHYAPF SD++++ +++F+L PF PF QLL V PSAS LP+
Sbjct: 383 YYHGVQSWSWYYPYHYAPFLSDVRNISGLSLTFDLAKPFMPFEQLLAVLPSASKDLLPQC 442
Query: 535 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFID 575
Y+ LMT +SPI ++YP DF+ D+NGK+ W+ + +PFID
Sbjct: 443 YQHLMTSLSSPIVEYYPQDFKTDLNGKQQEWEAVVLIPFID 483
>gi|345495292|ref|XP_001606765.2| PREDICTED: 5'-3' exoribonuclease 1-like [Nasonia vitripennis]
Length = 1200
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 122/328 (37%), Positives = 173/328 (52%), Gaps = 59/328 (17%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+ RFR ++D +S E E L + ++FD+N ITPGT FMA L
Sbjct: 99 MNQQRANRFRVARD--NSILEREILLTD--------------KLFDANSITPGTVFMADL 142
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
++++I +++ DP W+K K+ILS + PGEGEHKIM ++R + Y+ NTRHCLY
Sbjct: 143 IDHMKHFIAYKVSTDPLWQKCKIILSGSEAPGEGEHKIMQFIRYHKAQQNYNSNTRHCLY 202
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
LDADLI+L L THE HFS+LRE N GKAK+ E
Sbjct: 203 SLDADLIVLGLCTHEPHFSLLRE---------------------KNTFGKAKKMLTP--E 239
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFL 238
+ D + LH+ REYL YEF FE DLE I+DD++ + F VGNDF+
Sbjct: 240 ESD--------FHLLHLSLFREYLGYEFAPIKSKLKFEFDLEKIIDDWVLIGFLVGNDFI 291
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 298
P +P L I GA+ LL +VY + L GY+ + + +L R E +I+++ E +IF
Sbjct: 292 PQLPHLNIVNGALPLLYSVYIEVLPTLDGYINEAGELNLSRFEKYIKSLSHVEHKIF--- 348
Query: 299 ARLHQRHAERIKREKAQARRGDDVEPLA 326
A + + + V+P+
Sbjct: 349 -------ASTVSSKICNVKEAKKVDPIT 369
Score = 149 bits (376), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 82/237 (34%), Positives = 121/237 (51%), Gaps = 12/237 (5%)
Query: 364 KGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENK-EEFKAKLKELLRDKSDAFNSD 422
K S HK+ +T+ + I + + + DP E+ + K K DA + D
Sbjct: 338 KSLSHVEHKI----FASTVSSKICNVKEAKKVDPITGHFEQLSIESK-----KDDAKDLD 388
Query: 423 NPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSW 482
+ K + YY K N + + E +V Y + W ++YYY G CSW
Sbjct: 389 QEMKTKEYSNFEVQRRDYYLHKLNFE--DLSESLILPLVHEYIRAIQWTLNYYYHGCCSW 446
Query: 483 QWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDP 542
W++PYHYAPF D+K L+ N+ F++ PF P LL V P A+SH LP+ R L+T+
Sbjct: 447 SWYFPYHYAPFIRDVKGLENINLKFDMAKPFLPLQHLLAVLPPANSHLLPKPLRFLLTNS 506
Query: 543 NSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 599
NSPI FYP +FE+D+N K W+ I +PFI+E L+ + TL +E RN+
Sbjct: 507 NSPIIHFYPNEFEIDLNDKSNDWEAIVLIPFINEKELISAMDSYITTLNPKERHRNT 563
>gi|403171712|ref|XP_003330904.2| hypothetical protein PGTG_12441 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375169305|gb|EFP86485.2| hypothetical protein PGTG_12441 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 751
Score = 206 bits (525), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 120/308 (38%), Positives = 168/308 (54%), Gaps = 47/308 (15%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MN+QRSRRF+A++ A + R F R ++ S FDSN ITPGT FMA L
Sbjct: 95 MNEQRSRRFKAAQ-----ANQTMLQRNAFRRF------QTVSNSFDSNCITPGTPFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+I+ ++ DP W+ ++VI S +VPGEGEHKIM Y+R + Y P+ RHC+Y
Sbjct: 144 HEQLKYFINKKVTEDPAWQAVQVIFSGHDVPGEGEHKIMEYIRRAKTQQDYSPHIRHCIY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIMLAL +HE HF +LRE E +A K
Sbjct: 204 GLDADLIMLALLSHEPHFCLLRE------------------------ENRAPLK------ 233
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFR----IPNPPFEIDLECIVDDFIFMCFFVGND 236
+ + + + + I R+YL++EF I N F+ D+ I+DDFI +C FVGND
Sbjct: 234 RKPTINLKDQQFHLFQISLFRDYLNWEFSSLQLIKN--FKYDIRRIIDDFILLCIFVGND 291
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLPH+P L I +GAI +L +YKK GGYL D R++ + + S+E + F+
Sbjct: 292 FLPHLPNLHIDDGAIGVLFKIYKKILPQAGGYLNDSGTLHTHRLQLLLDELVSHEYQHFE 351
Query: 297 KRARLHQR 304
+Q+
Sbjct: 352 TSTGSNQK 359
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 83/163 (50%), Positives = 106/163 (65%), Gaps = 2/163 (1%)
Query: 436 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 495
WK +YY+ K + + + + + Y EGL W++ YYY GV SW W YPYHYAP S
Sbjct: 521 WKSKYYKNKMELQYNDSVQLHK--LTHAYVEGLQWILQYYYTGVASWSWAYPYHYAPMVS 578
Query: 496 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 555
DL + + SFELG PFKPF QL+GV P SS +P ++ LMT P+SPI D YPT FE
Sbjct: 579 DLNKVASYKFSFELGSPFKPFEQLMGVLPGLSSTHVPSAFQDLMTKPDSPILDLYPTSFE 638
Query: 556 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
D+NGKR+ WQ IAK+PFID RLL+ +K E+ L +EE RN
Sbjct: 639 TDLNGKRHEWQAIAKIPFIDSRRLLEAMKAHEYKLKDEEIERN 681
>gi|328709686|ref|XP_003244039.1| PREDICTED: 5'-3' exoribonuclease 1-like [Acyrthosiphon pisum]
Length = 509
Score = 206 bits (525), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 117/260 (45%), Positives = 152/260 (58%), Gaps = 42/260 (16%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++ AA+ E G LP + + FDSN ITPGT FM L
Sbjct: 94 MNQQRGRRFRSAHTAAEQTKEAIS-------RGETLPSE---ERFDSNCITPGTPFMVRL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y++ +++NDP W K++VILS VPGEGEHKIM Y+R ++ PGY+P+TRHCLY
Sbjct: 144 QSELEYFVADKMSNDPLWTKVQVILSGHQVPGEGEHKIMDYIRYMKSRPGYNPHTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L THE +FS+LRE E K RK +
Sbjct: 204 GLDADLIMLGLCTHEPYFSLLRE------------------------EVKFGRKTKK--- 236
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFL 238
E V + + LH+ +R+YL EF+ PFE DLE I+DD++ M F VGNDF+
Sbjct: 237 ---ETSVDETQFYLLHLSLMRDYLGLEFQELKETLPFEYDLESIIDDWVLMGFLVGNDFI 293
Query: 239 PHMPTLEIREGAINLLMAVY 258
PH+P L I +GA+ +L VY
Sbjct: 294 PHLPDLHISKGALPILYRVY 313
>gi|326327749|pdb|2Y35|A Chain A, Crystal Structure Of Xrn1-Substrate Complex
Length = 1140
Score = 206 bits (524), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 161/300 (53%), Gaps = 43/300 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR +++A A+ + R E R FDSN ITPGTEFM L
Sbjct: 94 MNQQRSRRFRTAREAEQQEAKAAQ-RGELREHER----------FDSNCITPGTEFMVRL 142
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+ ++ +++ DP W++ VILS PGEGEHKIM Y+R + P YDPNTRHCLY
Sbjct: 143 QEGLRAFLKTKISTDPLWQRCTVILSGQEAPGEGEHKIMDYIRYMKTQPDYDPNTRHCLY 202
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDA LI+L L THE+HF +LRE V +F
Sbjct: 203 GLDAALIILGLCTHELHFVVLREEV-------------------------------KFGR 231
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEF-RIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
V + + LH+ LREYL+ EF + ++D+ ++DD++ M F VGNDF+P
Sbjct: 232 NVKRTSVEETRFFLLHLGLLREYLELEFDALRTDEHKLDIAQLIDDWVLMGFLVGNDFIP 291
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P L I A+ LL Y + LGG + + K +LRR++ FI A+ E F++ A
Sbjct: 292 HLPCLHISSNALPLLYRTYIGIYPTLGGNINENGKLNLRRLQIFISALTEVELDHFKEHA 351
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 74/164 (45%), Positives = 103/164 (62%), Gaps = 3/164 (1%)
Query: 435 GWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA 494
+K +Y KF + +E +++ Y L WV+ YYY GV SW W+YP+HY PF
Sbjct: 413 NYKRNFYRNKFKR---DPNDELIEELCHHYVNALQWVLDYYYRGVQSWDWYYPFHYTPFI 469
Query: 495 SDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDF 554
SDLK+++Q I+F +G PF PF QLL V P+AS+ LP Y LM P SP+++FYP +F
Sbjct: 470 SDLKNIEQVEIAFHMGTPFLPFQQLLAVLPAASAKLLPVAYHDLMLLPTSPLAEFYPLEF 529
Query: 555 EVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
E D+NGK++ W+ + +PFIDE RLL + E L+ EE RN
Sbjct: 530 ESDLNGKKHDWEAVVLIPFIDEGRLLAAMLPCEAQLSLEERERN 573
>gi|68068571|ref|XP_676196.1| exoribonuclease [Plasmodium berghei strain ANKA]
gi|56495779|emb|CAH94068.1| exoribonuclease, putative [Plasmodium berghei]
Length = 1136
Score = 206 bits (523), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 126/363 (34%), Positives = 188/363 (51%), Gaps = 46/363 (12%)
Query: 28 EFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSD 87
+F E R +P D +DSN+ITPGT+FM LS+AL+Y+I ++ ND W+KI VI SD
Sbjct: 1 KFLSENRNVP--DDYHHWDSNIITPGTQFMHELSVALKYFIEHKITNDEKWKKIVVIFSD 58
Query: 88 ANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVV-F 146
ANV GEGEHKI ++++ QR GYDPNTRH ++G+DADLIML+LA+HE +F ILRE++
Sbjct: 59 ANVCGEGEHKIYNFIKSQRAQKGYDPNTRHVIHGMDADLIMLSLASHEPYFYILREIINL 118
Query: 147 TPGQQDK-------------------C--FLCGQPGHLAANCEGKAKRK-AGEFDEKGDE 184
P +++K C FL K K+K +++++
Sbjct: 119 DPKEENKPQVKDNYVGVFKGKGDLQYCTKFLRNNNSTTIDGNSNKGKKKYCNKYNDRNYA 178
Query: 185 VVVPKKP----------YQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVG 234
+ Q L + LREYL +F + +LE +DDFIF+CF G
Sbjct: 179 NINISSTCSINYENWNELQILDLTILREYLYKDFFF---DAKYNLERCIDDFIFICFLCG 235
Query: 235 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI 294
NDFLPH+P++ I G+I+ L+ +Y+K F LG YL + + + +I + E
Sbjct: 236 NDFLPHLPSISIASGSIDQLLLLYQKVFPVLGDYLINEGSMNFQSFIKYISFIAEVERET 295
Query: 295 FQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLV--PVSRFHGSRLASGPSPSPYQ 352
F + + KREK + ++ P Q D P+S+ R + SP
Sbjct: 296 FVSQYDFKK------KREKRELQKDAFKRPKCQDDGKKNDPMSQARNDRTSQHEQISPKN 349
Query: 353 QSE 355
++
Sbjct: 350 NTD 352
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/255 (40%), Positives = 153/255 (60%), Gaps = 11/255 (4%)
Query: 384 AAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLG---EPG-WKER 439
AI E E S E + EF LKE ++ ++ +NP+ED V+LG +P + R
Sbjct: 499 GAIFEEE-SPEMKKLNDITEFNLLLKEAVKKANEC---ENPKED-VELGADDDPNDLRAR 553
Query: 440 YYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKD 499
YY+ KF+ + +E ++VV +Y EGL WV+ YY++ W W+YPY+YAP +SDL
Sbjct: 554 YYKSKFHLDENDNVDEFVQEVVYKYIEGLAWVLCYYFQECPMWHWYYPYYYAPLSSDLL- 612
Query: 500 LDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMN 559
+ NISFE P PF QLL V PS SSH LP+ YR+LM SPI DFYP F+ + N
Sbjct: 613 IKDINISFEKDEPLLPFEQLLCVLPSNSSHCLPKMYRELMLKSESPIIDFYPKTFKEEEN 672
Query: 560 GKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYT 619
GK++ +Q I LPF+++ R++ + ++ TLT+EE +RN + +++ +H LS I T
Sbjct: 673 GKKFKYQWIVLLPFVEKERIIRFARNLDDTLTDEEKKRNRRGLNKIYMSSTHTLSKKITT 732
Query: 620 -LDEHCKQLKIKERV 633
+ + K++K KE+
Sbjct: 733 SMRTYIKEIKDKEKT 747
>gi|403216681|emb|CCK71177.1| hypothetical protein KNAG_0G01190 [Kazachstania naganishii CBS
8797]
Length = 1493
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/301 (39%), Positives = 176/301 (58%), Gaps = 42/301 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR + DA E L++ +R G ++P + FDSN ITPGTEFMA L
Sbjct: 94 MNQQRSRRFRTAMDA------ENMLKKALQR-GEEIP---SGEPFDSNSITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWE-KIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
+ L+Y+IH +++ND W +++I S VPG G HKIMS++R R+ G+D NTRHC+
Sbjct: 144 TKNLKYFIHDKISNDSNWSGDVEIIFSGHEVPGRGRHKIMSFIRNLRSQDGFDNNTRHCI 203
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
YGLDADLIML+L+ H HF++LRE V G++ GQ + KA E
Sbjct: 204 YGLDADLIMLSLSAHAPHFALLREEVVFGGRR------GQ------------RPKALE-- 243
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDF 237
++ + LHI LREY+ EF+ F D E ++DDFI + F +GNDF
Sbjct: 244 ---------EQNFFLLHISLLREYMGLEFQEIADELKFTYDFERVLDDFILVMFVIGNDF 294
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
LP++P L + +GA +L+ +K+ L GY+ + + +L R++ ++ + +E F++
Sbjct: 295 LPNLPDLHLNKGAFPVLLQTFKEALLHLDGYINENGQINLHRLKVWLDYLSQFELMNFER 354
Query: 298 R 298
+
Sbjct: 355 K 355
Score = 164 bits (414), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 82/184 (44%), Positives = 111/184 (60%), Gaps = 6/184 (3%)
Query: 436 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 495
WK +YY+EK + ++ + D+ Y EGL WV++YYY G SW W+Y +HYAP S
Sbjct: 515 WKNQYYKEKLGYGSQDDDKIV--DLTKNYVEGLQWVLYYYYRGCPSWGWYYQHHYAPRIS 572
Query: 496 DL-KDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDF 554
DL + LDQ I F+LG PF PF QL+ V P S + +P R LM DPNSPI DFYP
Sbjct: 573 DLARGLDQI-IKFDLGRPFTPFEQLMAVLPERSKNLIPAALRPLMYDPNSPIIDFYPASV 631
Query: 555 EVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLS 614
++DMNGK W+ + L F+DE RL++ +K LT EE RNS D+ F +P +
Sbjct: 632 KLDMNGKTADWEAVVLLSFVDEQRLVEAMKPYLAKLTPEERERNSFGVDLRFAF--NPQT 689
Query: 615 ASIY 618
++Y
Sbjct: 690 DNVY 693
>gi|320169903|gb|EFW46802.1| 5'-3' exoribonuclease 2 [Capsaspora owczarzaki ATCC 30864]
Length = 1548
Score = 204 bits (520), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 119/312 (38%), Positives = 159/312 (50%), Gaps = 67/312 (21%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERL--------RQEFEREGRKLPPKSDSQVFDSNVITP 52
MNQQR RR + ++ A + E + +E E E R LP FD+N ITP
Sbjct: 95 MNQQRQRRLKTARAAEKARTEASAIGDLTGAKPIEEIEAEARALP-------FDANCITP 147
Query: 53 GTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYD 112
GTEFM + L YYI ++ P W ++VILS PGEGEHKI+ ++R Q++ PGY+
Sbjct: 148 GTEFMDRMEAYLSYYIKRKITESPQWSSLQVILSGHRTPGEGEHKIVDWIRAQKSQPGYN 207
Query: 113 PNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAK 172
PNTRHC+YGLDADLIML+LA HE HF+ILRE V ++ A+
Sbjct: 208 PNTRHCMYGLDADLIMLSLAMHEPHFAILREKVLFRSKK-------------ASVNAADA 254
Query: 173 RKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIP----------NPPFE------ 216
R F + DE+ Q L+I LREYLD EF + + P E
Sbjct: 255 RSEVAF-QATDEL-------QLLYIGLLREYLDMEFGLSAGFKRSDGLRHGPLEKLMEQQ 306
Query: 217 ---------------IDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKE 261
+LE +DDFIF+CF +GNDFLPHMP +I G ++ Y++
Sbjct: 307 QKAATPALTSQSVSAWNLERTIDDFIFLCFIIGNDFLPHMPGFDIDSGGLDFAFEAYRQV 366
Query: 262 FRALGGYLTDGS 273
+L YL + S
Sbjct: 367 RNSLNDYLVNAS 378
Score = 126 bits (316), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 99/182 (54%), Gaps = 15/182 (8%)
Query: 433 EPGWKERYYEEKFN---AKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYH 489
E +K YY F+ + TP R+ ++ Y EGL WV+HYY +G+ SW W++PYH
Sbjct: 684 EASYKSSYYATYFDDVVSNTPSLRK-----LIKHYLEGLVWVLHYYTQGLASWSWYFPYH 738
Query: 490 YAPFASDLKDLDQF--NISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPIS 547
+APFASD+ +L + I F P P+ QLL V P AS+ LP R LMT ++
Sbjct: 739 FAPFASDMVNLGELYGQIHFPADSPLNPYEQLLAVLPLASAQFLPAPLRPLMT---GALA 795
Query: 548 DFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKK--IEHTLTEEEARRNSIMADML 605
+FY TD V + K ++ + +PFID RL EV+ +LT EE R S+ L
Sbjct: 796 EFYRTDHRVIPDEKGREYKDVLLIPFIDIERLRAEVRTALASGSLTAEERTRGSLGQAQL 855
Query: 606 FV 607
FV
Sbjct: 856 FV 857
>gi|218185281|gb|EEC67708.1| hypothetical protein OsI_35184 [Oryza sativa Indica Group]
Length = 944
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 157/511 (30%), Positives = 232/511 (45%), Gaps = 84/511 (16%)
Query: 248 EGAINLLMAVYKKEFRALGGYLTDGSKP--------SLRRVEHFIQAVGSYEDRIFQKRA 299
+GAI+LL+ VYK F +GGY+ D K + R+E F + YE++IF K
Sbjct: 305 QGAIDLLIEVYKTSFNKMGGYIVDTDKVKDKHAAYLKVSRLEKFFHKLSLYEEKIFLKCY 364
Query: 300 RLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSEC--- 356
L R E R+ + + P G+ +A P + EC
Sbjct: 365 DL-ARGFEDFGRKVGEEAEEQQEQGSWVAHPFGPSEPDIGAPVACNTWAVPDRVGECRIV 423
Query: 357 -----VGRLDNGKGTSGRPHKVPRLSSGATIGAAIVE--AEN---------SFETDPQEN 400
+ + K+ R ++ T E EN S +TD Q +
Sbjct: 424 SSRRSSRDIKRCQLRENFQRKIERQAAENTWNERNTENVEENLDDQCIMVKSSQTDGQVS 483
Query: 401 KEE--------FKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEE 452
E+ + LK++L +K D + + DK+KLG PGWK R+++EKF+A+T +E
Sbjct: 484 DEQDITMNTLELRKNLKDILHNKQDLIKTGACKHDKIKLGSPGWKSRFFKEKFDAETKDE 543
Query: 453 REETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHP 512
+ + ++V +Y EGLCWV+ YY+ V SW W+YP++YAPFASD++ L +
Sbjct: 544 IAKLQNEMVQKYLEGLCWVLCYYFADVPSWSWYYPFYYAPFASDVRGLSR---------- 593
Query: 513 FKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLP 572
S ALP Y KLM S I FYP++ ++D +GKRY WQGIAKLP
Sbjct: 594 ---------------SFALPGCYSKLMDCDESAIQAFYPSELDIDTDGKRYLWQGIAKLP 638
Query: 573 FIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLS---ASIYTLDEHCKQLKI 629
FI++ LL K E L E RRN++ + +F+ S+ L+ A T D ++L I
Sbjct: 639 FIEDKLLLSVTKTAEKDLAVHELRRNTVRQEKIFLRNSNALAKNEAFAQTSDCSLQKLPI 698
Query: 630 KERV-EVKERLNPELSDGMNGYISPCAGDPHPPVFRSPVASMEDIMGNQVLCAIYKLPDA 688
E+ L+P+ D NG+ G P I + + A + P+A
Sbjct: 699 DPATSEIGGWLSPDDDDFSNGF----CGSP--------------IENDLSISAKFFNPEA 740
Query: 689 HKHVTRPPAGVIFPKKIVQLEDLKPAPVLWH 719
K TR V P K V D+ P LWH
Sbjct: 741 VKPATRLLQNVTVPYKTVTEADICARP-LWH 770
Score = 204 bits (518), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 113/198 (57%), Positives = 131/198 (66%), Gaps = 6/198 (3%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPK---SDSQVFDSNVITPGTEFM 57
MNQQR+RRF+++ A + EE LR F EG+K+ P+ S S+V D NVITPGTEFM
Sbjct: 109 MNQQRARRFKSAMPAKQAEVEENILRDRFRAEGKKVLPQETSSSSEVSDPNVITPGTEFM 168
Query: 58 AVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRH 117
LS AL+YYI LNNDP W+ I VILSDANVPGEGEHKIMS++R QR GYDPNTRH
Sbjct: 169 DKLSDALKYYIRAHLNNDPLWKDINVILSDANVPGEGEHKIMSFIRAQRGREGYDPNTRH 228
Query: 118 CLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAG- 176
CLYGLDADLIMLALA+HEVHFSILRE V Q+ P + K K +A
Sbjct: 229 CLYGLDADLIMLALASHEVHFSILREEVLHQNNQENTIPI-TPKTFTSQEAEKFKCRAWF 287
Query: 177 -EFDEKGDEVVVPKKPYQ 193
E E + KKPYQ
Sbjct: 288 PRITEARPEGKLTKKPYQ 305
>gi|157119783|ref|XP_001659504.1| 5'-3' exoribonuclease, putative [Aedes aegypti]
gi|108875157|gb|EAT39382.1| AAEL008814-PA [Aedes aegypti]
Length = 1668
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 115/297 (38%), Positives = 165/297 (55%), Gaps = 42/297 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++++A + A E ++ + E R FDSN ITPGT FM L
Sbjct: 94 MNQQRGRRFRSAREAQEQAEEAQKKGEVLPTEAR----------FDSNCITPGTSFMVRL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
AL+++I ++++ +P W+ KVILS PGEGEHKIM Y+R ++ P +D NTRHCLY
Sbjct: 144 QKALEHFIKVKVSTNPLWKHCKVILSGHETPGEGEHKIMEYIRYAKSQPDFDSNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADL+ML L THE HFS+LRE V K G+ D+
Sbjct: 204 GLDADLVMLGLCTHEKHFSLLREEV----------------------------KFGKNDK 235
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFL 238
K +V + + LH+ +REYL+ EF FE ++ ++DD++ M + VGNDF+
Sbjct: 236 KSS--IVEETRFYLLHLTLMREYLELEFAPVRDKLKFEFNIYKLIDDWVLMGYMVGNDFI 293
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 295
PH+P L I E A+ L Y L GY+ +G ++ R+E + + ++ IF
Sbjct: 294 PHLPHLHINENALPTLFQAYMDILPTLDGYINEGGILNMPRLEVLMNRLARFDRDIF 350
Score = 174 bits (442), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/266 (36%), Positives = 146/266 (54%), Gaps = 16/266 (6%)
Query: 403 EFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKT----------PEE 452
E L L++ D F+ D E+D G+ ++E++F A +
Sbjct: 384 EMDCDLSALIKASEDMFSDD--EDDAEPPGDIENDPEFFEKEFTAYKRNYYITKLGYQDY 441
Query: 453 REETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHP 512
+ TR + Y L W + YYY GV SW W+YP+HYAPF SDL+++ ++FE G P
Sbjct: 442 NQATRDEQTECYIRALQWTLLYYYRGVPSWAWYYPHHYAPFISDLQNISSLKLNFEPGKP 501
Query: 513 FKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLP 572
F PF QLL V P+AS LP Y KLMTDPNSP+ D+YP +FE D+NGK+ +W+ + +P
Sbjct: 502 FLPFQQLLSVLPTASKDHLPSAYHKLMTDPNSPVVDYYPENFETDLNGKQQAWEAVVLIP 561
Query: 573 FIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSA--SIYTLDEHCKQLKIK 630
FIDE RLL ++ + LT+EE +RN ++F S + Y +E +QLK+K
Sbjct: 562 FIDEKRLLKAMEPCDAFLTDEEKQRNVHGPMLVFQYDSKGTKQLPACYGFEE-IEQLKVK 620
Query: 631 ERVEVKERLNPELSDGMNGYISPCAG 656
E +++++ +L G + P G
Sbjct: 621 ESAIYRDQVSCDLV-GNKLVLGPSKG 645
>gi|358400793|gb|EHK50119.1| hypothetical protein TRIATDRAFT_280608 [Trichoderma atroviride IMI
206040]
Length = 454
Score = 203 bits (516), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 126/178 (70%), Gaps = 6/178 (3%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQV-----FDSNVITPGTE 55
MNQQRSRRFR++++A + +++ L + +R+ +DS+ FDSN ITPGT
Sbjct: 112 MNQQRSRRFRSAQEAKEKEEDKQALIELLKRQNGGTFAAADSETVVKKAFDSNSITPGTP 171
Query: 56 FMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNT 115
FM +L+++L+Y+ +LN DP W K+K+I+SDA VPGEGEHKIM++VR QR P YDPNT
Sbjct: 172 FMDILALSLRYWCQYKLNTDPAWAKLKIIISDATVPGEGEHKIMNFVRSQRASPNYDPNT 231
Query: 116 RHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAK 172
RH +YGLDADLIML LATHE HF +LRE V F G+ C LCGQ GH A NC G AK
Sbjct: 232 RHVIYGLDADLIMLGLATHEPHFRVLREDVFFQDGKNRACKLCGQKGHEANNCRGNAK 289
>gi|294872967|ref|XP_002766468.1| 5'->3' exoribonuclease, putative [Perkinsus marinus ATCC 50983]
gi|239867348|gb|EEQ99185.1| 5'->3' exoribonuclease, putative [Perkinsus marinus ATCC 50983]
Length = 649
Score = 203 bits (516), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 113/261 (43%), Positives = 152/261 (58%), Gaps = 46/261 (17%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR + DA ++ ER + + PKS FDSN ITPGT FM L
Sbjct: 92 MNQQRSRRFRTALDAVEAT---ERAVKNGDH------PKSIDTFFDSNSITPGTAFMERL 142
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
++ L+++ ++ +P W+ ++V++S NVPGEGEHKIM Y+R ++ P YDPNTRHC+Y
Sbjct: 143 TVQLRFFAQKMISENPLWQGVEVVVSGPNVPGEGEHKIMDYIRATKSQPDYDPNTRHCVY 202
Query: 121 GLDADLIMLALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADLIML+LATHE + ++LR EV+F P + D L +P L
Sbjct: 203 GLDADLIMLSLATHEPYVALLREEVIFGPEKTDARALV-RPDRL---------------- 245
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
Q LHI+ LREYL EF E DLE ++DDF+ C VGNDFLP
Sbjct: 246 -------------QLLHIYVLREYLALEFG------EEDLERVIDDFVLFCMLVGNDFLP 286
Query: 240 HMPTLEIREGAINLLMAVYKK 260
H+P + +G + L + YK+
Sbjct: 287 HLPYTGVGDGGLERLFSAYKE 307
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 88/175 (50%), Gaps = 19/175 (10%)
Query: 439 RYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDL- 497
++Y+ K E +E +D Y EGL W YYY G SW W+Y +HYAPF +
Sbjct: 413 QFYKVKGECDDKAEVDELVRD----YLEGLQWSYSYYYRGPPSWHWYYRHHYAPFVCTMV 468
Query: 498 KDLDQF-----NISFELGHPFKPFNQLLGVFPSASSH-ALPEHYRKLMTDPNSPISDFYP 551
D D F I F+ G P PF QL+ V P++S LP+ + KL T +SP+ +YP
Sbjct: 469 NDFDDFVTAGGQIKFDGGGPVTPFQQLMTVLPASSGQRLLPKIFAKLFTSSSSPVKQYYP 528
Query: 552 TDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKI--------EHTLTEEEARRN 598
F++D++G + W G + F+DE L D + + LTE E RN
Sbjct: 529 ERFDIDIDGVKVPWGGTTLINFVDEDVLFDAMNAAIAESERTGQDALTEAEKERN 583
>gi|195059493|ref|XP_001995648.1| GH17871 [Drosophila grimshawi]
gi|193896434|gb|EDV95300.1| GH17871 [Drosophila grimshawi]
Length = 1754
Score = 202 bits (515), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 114/306 (37%), Positives = 168/306 (54%), Gaps = 48/306 (15%)
Query: 1 MNQQRSRRFRASKDA--ADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMA 58
MNQQRSRRFR +++A D+ A + ++ ER FDSN ITPGT FM+
Sbjct: 94 MNQQRSRRFRTAREAEQIDAKALQRGEKRMHER-------------FDSNCITPGTGFMS 140
Query: 59 VLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHC 118
L L+ ++ +++ D W+K VILS PGEGEHKIM Y+R + P +DPN RHC
Sbjct: 141 RLQKGLRCFLRTKVSTDTLWQKCCVILSGVETPGEGEHKIMDYIRYLKAQPDFDPNMRHC 200
Query: 119 LYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEF 178
LYGLDADLI+L L THE+HF +LRE V +F
Sbjct: 201 LYGLDADLIILGLCTHELHFVVLREEV-------------------------------KF 229
Query: 179 DEKGDEVVVPKKPYQFLHIWTLREYLDYEF-RIPNPPFEIDLECIVDDFIFMCFFVGNDF 237
+ V + + LH+ LREYL+ EF + ++D+ ++DD++ M F VGNDF
Sbjct: 230 GKNVKRTAVEETRFFLLHLGLLREYLELEFAELSKSERKLDVAQLIDDWVLMGFLVGNDF 289
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
+P +P L I A++LL Y + + LGG + + + +L+R+ F+ A+ E +IF +
Sbjct: 290 IPSLPLLHIHTNALSLLYKTYIRVYPQLGGNINEQGRLNLQRLAIFMNALSEVEMQIFDE 349
Query: 298 RA-RLH 302
++ +LH
Sbjct: 350 QSDKLH 355
Score = 166 bits (421), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 101/164 (61%), Gaps = 3/164 (1%)
Query: 435 GWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA 494
+K YY KF E + ++ Y L WV+ YYY GV SW W+YPYHYAPF
Sbjct: 410 NFKRNYYRNKFKN---EMHDGLIAELGHHYVTALQWVLDYYYRGVQSWDWYYPYHYAPFI 466
Query: 495 SDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDF 554
SD+ D+ I+F++G PF PF QLL V P ASS LP Y LM +P+S ++DFYP +F
Sbjct: 467 SDITDIPSVKINFQMGKPFMPFEQLLAVLPPASSALLPVAYHDLMLNPSSTLADFYPKEF 526
Query: 555 EVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
E D+NGK + W+ + +PFID+ RLLD + + + LT EE RN
Sbjct: 527 ETDLNGKMHEWEAVVLIPFIDQRRLLDAMSECDSQLTTEERLRN 570
>gi|45187827|ref|NP_984050.1| ADL046Cp [Ashbya gossypii ATCC 10895]
gi|44982611|gb|AAS51874.1| ADL046Cp [Ashbya gossypii ATCC 10895]
gi|374107264|gb|AEY96172.1| FADL046Cp [Ashbya gossypii FDAG1]
Length = 1474
Score = 202 bits (514), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 114/300 (38%), Positives = 173/300 (57%), Gaps = 45/300 (15%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR++ DA E L + ER G ++P + + FDSN ITPGTEFM L
Sbjct: 94 MNQQRARRFRSAMDA------ETSLNRARER-GDEIP---EGEPFDSNSITPGTEFMHKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y+IH ++++D W+ +ILS VPGEGEHKIM Y+R R Y+PNTRHC+Y
Sbjct: 144 TTNLKYFIHEKVSSDSLWQNKNIILSGHEVPGEGEHKIMQYIRTLRAQQDYNPNTRHCIY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKR-KAGEFD 179
GLDADLIML L+ H+ H ++LRE + G+A++ KA E
Sbjct: 204 GLDADLIMLGLSIHDTHVALLREEILY---------------------GRAQKPKALE-- 240
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNP--PFEIDLECIVDDFIFMCFFVGNDF 237
++ + LH+ +REYL+ EF+ + F+ D E ++DDFI + F +GNDF
Sbjct: 241 ---------QQNFYLLHLAIMREYLELEFQEISDELEFKFDFERLLDDFILVMFVIGNDF 291
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
LP++P L + +GA +L+ +K+ + L GY+ + + R ++ + +E F++
Sbjct: 292 LPNLPDLHLNKGAFPVLLQTFKETLKHLDGYINENGTINFARFSVWLDYLSKFELMNFER 351
Score = 170 bits (430), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 106/173 (61%), Gaps = 2/173 (1%)
Query: 436 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 495
WK+ YY+EK +E + K++ Y EGL WV++YYY+G SW W+Y YHYAP S
Sbjct: 510 WKDSYYKEKVGFSIHDE--DKLKEMANNYIEGLQWVLYYYYQGCPSWSWYYRYHYAPRIS 567
Query: 496 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 555
D++ NISF L PFKPF QL+ V P+ S LP YR LM D SPI D YP + E
Sbjct: 568 DIRKGLDVNISFSLDQPFKPFQQLMAVLPARSKELLPPVYRPLMYDDKSPILDLYPAEVE 627
Query: 556 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVL 608
+D NGK W+ + KL F+D+ RLL + ++ LT EE +RN + D++FV
Sbjct: 628 LDKNGKTADWEAVVKLKFVDQDRLLAAMAPLDDLLTPEEKKRNIVGTDLIFVF 680
>gi|294951471|ref|XP_002786997.1| 5'->3' exoribonuclease, putative [Perkinsus marinus ATCC 50983]
gi|239901587|gb|EER18793.1| 5'->3' exoribonuclease, putative [Perkinsus marinus ATCC 50983]
Length = 728
Score = 202 bits (514), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 113/261 (43%), Positives = 151/261 (57%), Gaps = 46/261 (17%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR + DA ++ ER + + PKS FDSN ITPGT FM L
Sbjct: 92 MNQQRSRRFRTALDAVEAT---ERAVKNGDH------PKSIDTFFDSNSITPGTAFMERL 142
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
++ L+++ ++ +P W+ ++V++S NVPGEGEHKIM Y+R ++ P YDPNTRHC+Y
Sbjct: 143 TVQLRFFAQKMISENPLWQGVEVVVSGPNVPGEGEHKIMDYIRATKSQPDYDPNTRHCVY 202
Query: 121 GLDADLIMLALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADLIML+LATHE + ++LR EV+F P + D L +P L
Sbjct: 203 GLDADLIMLSLATHEPYVALLREEVIFGPEKTDARALV-RPDRL---------------- 245
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
Q LHI+ LREYL EF E DLE ++DDF+ C VGNDFLP
Sbjct: 246 -------------QLLHIYVLREYLALEFG------EEDLERVIDDFVLFCMLVGNDFLP 286
Query: 240 HMPTLEIREGAINLLMAVYKK 260
H+P + +G + L YK+
Sbjct: 287 HLPYTGVGDGGLERLFGAYKE 307
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 88/175 (50%), Gaps = 19/175 (10%)
Query: 439 RYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDL- 497
++Y+ K E +E +D Y EGL W YYY G SW W+Y +HYAPF +
Sbjct: 413 QFYKVKGECDDKAEVDELVRD----YLEGLQWSYSYYYRGPPSWHWYYRHHYAPFVCTMV 468
Query: 498 KDLDQF-----NISFELGHPFKPFNQLLGVFPSASSH-ALPEHYRKLMTDPNSPISDFYP 551
D D F I F+ G P PF QL+ V P++S LP+ + KL T +SP+ +YP
Sbjct: 469 NDFDDFVAAGGQIKFDGGGPVTPFQQLMTVLPASSGQRLLPKIFAKLFTSSSSPVKQYYP 528
Query: 552 TDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKI--------EHTLTEEEARRN 598
F++D++G + W G + F+DE L D + + LTE E RN
Sbjct: 529 ERFDIDIDGVKAPWGGTTLINFVDEDVLFDAMNAAIAESERTGQDVLTEAEKERN 583
>gi|409080083|gb|EKM80444.1| hypothetical protein AGABI1DRAFT_113625, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 315
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 105/210 (50%), Positives = 142/210 (67%), Gaps = 16/210 (7%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQE----FEREGRKLPPKSDSQVFDSNVITPGTEF 56
MNQQRSRRFR+S DA E+E RQE ++ G+++ + + +DSN ITPGT F
Sbjct: 116 MNQQRSRRFRSSHDAK----EKEDARQESLKIWKAMGKEITEEEHKEAWDSNAITPGTPF 171
Query: 57 MAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTR 116
M +L+ +L+Y++ ++N DP W+ I+V++SDA VPGEGEHKIM ++R QR+ PG+DPNT+
Sbjct: 172 MDLLATSLRYWVVQKMNTDPAWKNIQVLISDAGVPGEGEHKIMDFIRRQRSNPGHDPNTQ 231
Query: 117 HCLYGLDADLIMLALATHEVHFSILREVVFTPGQQ-DKCFLCGQPGHLAANCEGKAKRKA 175
H +YGLDADLIMLALATHE +F +LRE VF + C +CGQ GH AA C G
Sbjct: 232 HVIYGLDADLIMLALATHEPNFRVLREDVFANDTKPTACRMCGQEGHYAAQCTG----TK 287
Query: 176 GEFDEKGDEVVVPKKPYQFLHIWTLREYLD 205
E ++K KKP+ FL + LREYL+
Sbjct: 288 AEIEKKTPP---DKKPFIFLDVAILREYLE 314
>gi|426198151|gb|EKV48077.1| hypothetical protein AGABI2DRAFT_191725, partial [Agaricus bisporus
var. bisporus H97]
Length = 315
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 105/210 (50%), Positives = 142/210 (67%), Gaps = 16/210 (7%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQE----FEREGRKLPPKSDSQVFDSNVITPGTEF 56
MNQQRSRRFR+S DA E+E RQE ++ G+++ + + +DSN ITPGT F
Sbjct: 116 MNQQRSRRFRSSHDAK----EKEDARQESIKIWKAMGKEITEEEHKEAWDSNAITPGTPF 171
Query: 57 MAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTR 116
M +L+ +L+Y++ ++N DP W+ I+V++SDA VPGEGEHKIM ++R QR+ PG+DPNT+
Sbjct: 172 MDLLATSLRYWVVQKMNTDPAWKNIQVLISDAGVPGEGEHKIMDFIRRQRSNPGHDPNTQ 231
Query: 117 HCLYGLDADLIMLALATHEVHFSILREVVFTPGQQ-DKCFLCGQPGHLAANCEGKAKRKA 175
H +YGLDADLIMLALATHE +F +LRE VF + C +CGQ GH AA C G
Sbjct: 232 HVIYGLDADLIMLALATHEPNFRVLREDVFANDTKPTACRMCGQEGHYAAQCTG----TK 287
Query: 176 GEFDEKGDEVVVPKKPYQFLHIWTLREYLD 205
E ++K KKP+ FL + LREYL+
Sbjct: 288 AEIEKKTPP---DKKPFIFLDVAILREYLE 314
>gi|307180136|gb|EFN68180.1| 5'-3' exoribonuclease 1 [Camponotus floridanus]
Length = 1644
Score = 200 bits (508), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 110/290 (37%), Positives = 157/290 (54%), Gaps = 43/290 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
+NQQR RRFRA+KDA A+ + E +E R FDSN ITPGT FMA L
Sbjct: 93 INQQRGRRFRAAKDAEVQEAKAKAKGLEIPKEKR----------FDSNCITPGTLFMAKL 142
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+ ++ +++ D W+K K++ S + VPGEGEHKIM Y+R + Y+ N+RHCLY
Sbjct: 143 GEQLKLFVEYKVSMDDTWKKCKILFSGSEVPGEGEHKIMDYIRYMKASKDYNCNSRHCLY 202
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE +FS+LRE V +F +
Sbjct: 203 GLDADLIMLGLCSHEPNFSLLREEV-------------------------------KFGK 231
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPP--FEIDLECIVDDFIFMCFFVGNDFL 238
+ ++ + + LH+ LREY+++EF F D+E I+DD++ M F VGNDF+
Sbjct: 232 QQVKMTPEETKFCLLHLSLLREYIEHEFSPIKDKLLFPFDIEKIIDDWVLMGFLVGNDFI 291
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVG 288
PH+P L I GA+ +L Y + L GY+ + L R E F++ +
Sbjct: 292 PHLPNLHIANGALPILYRAYMEVLPTLDGYINEAGTLKLDRFEKFMENLS 341
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/220 (37%), Positives = 118/220 (53%), Gaps = 11/220 (5%)
Query: 437 KERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASD 496
K YY K K + E + Y + W + YYY G CSW W+YP+HYAP+ SD
Sbjct: 442 KRDYYMNKLEYKNVDA--EVLRSQAEGYVRAIQWNLGYYYHGCCSWSWYYPHHYAPYISD 499
Query: 497 LKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEV 556
+KD + FELG PF PF QLL V P+ S LP ++ L+T+ +SPI ++YP DF+
Sbjct: 500 IKDFKDLKLEFELGEPFLPFQQLLAVLPAYSKDLLPMAFQTLLTEESSPIINYYPHDFKT 559
Query: 557 DMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPL--- 613
D+NGK+ W+ + +PFIDE L+ ++ LT +E RN M + S +
Sbjct: 560 DLNGKKQEWEAVVLIPFIDEKLLVAAMQPHLSKLTADEDARNR-HGPMCLYMYSDEIRST 618
Query: 614 -SASIYTLD-EHCKQLKIKERVEV---KERLNPELSDGMN 648
A+IY + +C QL R E+ +E+L LS G N
Sbjct: 619 QKATIYFPEFTNCAQLTSINRDEIFVPREQLIRGLSPGFN 658
>gi|303277183|ref|XP_003057885.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460542|gb|EEH57836.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 398
Score = 199 bits (507), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 106/171 (61%), Positives = 125/171 (73%), Gaps = 8/171 (4%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+++A + EEE+LR+ EG K+P K S+ FDSNVITPGT FM L
Sbjct: 83 MNQQRSRRFRAAQEAQEKEEEEEKLRETLRAEGVKVPDKVKSEAFDSNVITPGTPFMGRL 142
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S ALQYY+H RLN DPGW +KVI+SDA+VPGEGEHK M Y+R QR L G+DPNTRH +Y
Sbjct: 143 SAALQYYVHQRLNTDPGWRGVKVIMSDASVPGEGEHKAMHYIRQQRGLNGFDPNTRHVVY 202
Query: 121 GLDADLIMLALATHEVHFSILREVVF--------TPGQQDKCFLCGQPGHL 163
GLDADLIMLALATHE +F ILREVVF P +D+ G PG +
Sbjct: 203 GLDADLIMLALATHEPNFHILREVVFQKNAPPPDVPSTRDQIMGEGAPGSM 253
>gi|389582934|dbj|GAB65670.1| exoribonuclease [Plasmodium cynomolgi strain B]
Length = 1327
Score = 199 bits (506), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 118/345 (34%), Positives = 183/345 (53%), Gaps = 46/345 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRF++ + LR++F E R +P + +DSN+ITPGT+FM L
Sbjct: 138 MNQQRSRRFKSILCSEIERNAYIELREKFLSENRTVP--EELTFWDSNIITPGTQFMYEL 195
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S+AL+Y++ ++ ND W+ I VI SDAN R+ PGYDPNTRH ++
Sbjct: 196 SVALKYFVEHKITNDEKWKNIVVIFSDAN----------------RSQPGYDPNTRHVIH 239
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQ-----QDKCFL----CGQPGHLAANCEGKA 171
G+DADLIML+LA+HE +F ILRE++ + Q+K F+ Q L K
Sbjct: 240 GMDADLIMLSLASHEPYFYILREIIILDSKGEEKVQNKDFVGVLKSKQDLPLCTTHIRKT 299
Query: 172 KRKAGEFDE-------KGDEVVVPKKPY---QFLHIWTLREYLDYEFRIPNPPFEIDLEC 221
K+ ++++ + ++ + + Q L + LREYL +F + +LE
Sbjct: 300 KKMYTKYNDPHYANINRSHNCMINSENWNELQILDLTILREYLSKDFFFDST---YNLER 356
Query: 222 IVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVE 281
+DDFIF+CF GNDFLPH+P++ I G+I+ L+ +Y+K LG YL + K +L+
Sbjct: 357 CIDDFIFICFLCGNDFLPHLPSISIAAGSIDQLVLLYQKVLPVLGDYLINEGKINLKPFS 416
Query: 282 HFIQAVGSYEDRI------FQKRARLHQRHAERIKREKAQARRGD 320
++ + E F+K+ + + +KR K + D
Sbjct: 417 KYVSFIAEVERETFISQYDFKKKREKRDQQKDSLKRVKCTDEQND 461
Score = 172 bits (436), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 91/228 (39%), Positives = 135/228 (59%), Gaps = 9/228 (3%)
Query: 394 ETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKE----RYYEEKFNAKT 449
ET + EF LKE ++ ++ +NP+ED V+LG E +YY+ KF+
Sbjct: 656 ETKRINDINEFNMLLKEAIKKANEC---ENPKED-VELGGDENPELIRIKYYKSKFHLDE 711
Query: 450 PEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFEL 509
+ ++ K+VV +Y EGL WV+ YY++ W W+YPY+YAP +SDL +D N F
Sbjct: 712 SDHVDDFVKEVVYKYIEGLSWVLLYYFQSCPMWHWYYPYYYAPLSSDLI-IDNVNFIFHK 770
Query: 510 GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIA 569
P P QLL V PS SSH LP+ Y++LM +SPI DFYP F+ + NGK+Y +Q +
Sbjct: 771 DEPILPLEQLLCVLPSNSSHCLPKSYQELMVRYDSPIIDFYPKTFKEEENGKKYKYQWVI 830
Query: 570 KLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASI 617
LPF+D+ R++ +++ TLTEEE +RN + +++ SH LS I
Sbjct: 831 LLPFVDKERIIKHARELNDTLTEEERKRNRRGMNKIYMNCSHSLSKQI 878
>gi|340054861|emb|CCC49169.1| putative 5'-3' exonuclease XRNA [Trypanosoma vivax Y486]
Length = 1411
Score = 199 bits (505), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 124/319 (38%), Positives = 175/319 (54%), Gaps = 35/319 (10%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RR+R S E R+E G ++P + D VFDSN ITPGT+FM +
Sbjct: 94 MNQQRQRRYR-------SGYELMIAREEALARGEEIPEEHD--VFDSNCITPGTDFMVRI 144
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S QY+I ++++ DP W+K +I S + PGEGEHKI+ ++R + PGY PN HC+Y
Sbjct: 145 SEHFQYFITMKVSTDPAWQKCNIIYSGHDHPGEGEHKIVDFIRRNKMQPGYSPNESHCMY 204
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADL+MLALATHE +F +LREVV + E + R+ E D+
Sbjct: 205 GLDADLVMLALATHEPNFVLLREVVSF-----------------GSSESRRLREQKEADK 247
Query: 181 KGDEVV-----VPKKPYQFLHIWTLREYLDYEFRI---PNPPFEIDLECIVDDFIFMCFF 232
VV VP + + H+ LR+YLD + R P D E +VDDF+ MCFF
Sbjct: 248 ANGFVVDKSYHVPDE-FVLFHLNLLRDYLDLDLRDKVGAGLPVSYDFERVVDDFVLMCFF 306
Query: 233 VGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYED 292
VGNDFLP +PTL I +G++ ++ +Y YLT+ + + R VE +IQ + E
Sbjct: 307 VGNDFLPSIPTLSINDGSLVHMLDIYASRVLKANMYLTEEGRINWRTVELWIQGLAELEF 366
Query: 293 RIFQKRARLHQRHAERIKR 311
+ R + + ++ R
Sbjct: 367 STIKAREAKEKEYQRQLAR 385
Score = 137 bits (344), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 98/176 (55%), Gaps = 7/176 (3%)
Query: 436 WKERYYEEKF---NAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAP 492
+K+++Y EK N P+ +E D+ L Y EGL WV YYY G SW+WF+P+HYAP
Sbjct: 406 YKDQFYREKHGFDNGWDPQGKEIA--DLRLHYVEGLVWVYGYYYHGPPSWKWFFPHHYAP 463
Query: 493 FASDLKDLDQF--NISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFY 550
SDL +L +SFE+G PF P QLL V P S LP Y L+ SP++ ++
Sbjct: 464 MVSDLVNLPAVANRVSFEVGEPFLPHQQLLAVLPPMSYRLLPRAYWPLLRSKGSPLARYF 523
Query: 551 PTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 606
P ++D G R SW+GI +PFIDE LL ++ +T E+ N + LF
Sbjct: 524 PEQLKIDREGARASWEGIVLIPFIDERTLLAAFSSVQDRVTPEDRANNRLGKPTLF 579
>gi|326429495|gb|EGD75065.1| hypothetical protein PTSG_06722 [Salpingoeca sp. ATCC 50818]
Length = 1402
Score = 198 bits (504), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 112/299 (37%), Positives = 163/299 (54%), Gaps = 39/299 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR++K+A E RQ+ EREG+ L FDSN ITPGT FM L
Sbjct: 93 MNQQRARRFRSAKEA-------EEARQKAEREGKLLDDPDAPPPFDSNCITPGTPFMHRL 145
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y++ ++ +DP W+ ++V+LS VPGEGEHKIM ++R ++ YD NTRHCLY
Sbjct: 146 HQHLEYFVQAKITSDPAWQGLRVVLSGHQVPGEGEHKIMDFIRSEKLRDDYDANTRHCLY 205
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLI+L L +HE HFS+LRE E + R+ +
Sbjct: 206 GLDADLIILGLVSHEPHFSLLRE------------------------EVRFGRRQKSKKD 241
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNP--PFEIDLECIVDDFIFMCFFVGNDFL 238
D V + L + REYL EF P F D E ++DD++ + F +GNDF+
Sbjct: 242 SQDNV------FHLLSLSLYREYLRMEFFDVKPLLSFPFDFERLLDDWVLLGFLIGNDFI 295
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
PH+P I + + L + YK + L G++TDG ++ R++ ++ + + F +
Sbjct: 296 PHLPHFHISQDIVPTLYSSYKLALQKLDGWITDGGTINMARLQVLLEELSIIDRNAFDE 354
Score = 166 bits (420), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 82/188 (43%), Positives = 107/188 (56%), Gaps = 5/188 (2%)
Query: 436 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 495
+K YY EK + ++ E R Y GL W++ YYY+GV SW WF+P HYAPF S
Sbjct: 463 YKANYYLEKLGVQRYDD--EFRLSQAQEYVRGLQWILFYYYKGVPSWSWFFPSHYAPFVS 520
Query: 496 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 555
D++ ++ F FELG PF PF QL+ V P AS +P Y+ LM D SPI DFYP F+
Sbjct: 521 DIRAIEDFKPEFELGEPFSPFEQLMSVLPPASRDHVPPAYQPLMLDSQSPIIDFYPQTFK 580
Query: 556 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSA 615
D+NGKR +W+ + +PFID+ RLL V + H LT+ E RN FV H SA
Sbjct: 581 TDLNGKRNAWEAVVLIPFIDQDRLLSAVHSLSHLLTDAEKNRNKHSLAKCFV---HSASA 637
Query: 616 SIYTLDEH 623
+ H
Sbjct: 638 RLRVASPH 645
>gi|307194446|gb|EFN76744.1| 5'-3' exoribonuclease 1 [Harpegnathos saltator]
Length = 1642
Score = 197 bits (500), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 114/298 (38%), Positives = 161/298 (54%), Gaps = 44/298 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
+NQQRSRRFR +KDA A + G +P + FDSN ITPGT FMA L
Sbjct: 94 INQQRSRRFRTAKDAEVQEANAKI-------HGLVIPTEKK---FDSNCITPGTFFMAEL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L +I +++ D W+K KV+ S + VPGEGEHKIM ++R + YD N+RHCLY
Sbjct: 144 TRRLNRFIVHKISIDDTWKKCKVLFSGSEVPGEGEHKIMDFIRHMKASKDYDFNSRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +HE +FS+LRE V +F +
Sbjct: 204 GLDADLIMLGLCSHEPNFSLLREEV-------------------------------KFGK 232
Query: 181 KGDEVVVPKKP-YQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDF 237
K ++ P++ + LH+ LREY+D+EF F D+E I+DD++ M F VGNDF
Sbjct: 233 KQKKIQTPEETKFCLLHLSLLREYIDHEFSPVKDKISFPYDIEKIIDDWVLMGFLVGNDF 292
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 295
+PH+P L I GA+ +L Y + GY+ + +L R E F++ + + + F
Sbjct: 293 IPHLPNLHITSGALPILYRAYMEVLPTFEGYINETGTLNLNRFEKFMERLSRLDVKQF 350
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 88/136 (64%)
Query: 464 YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVF 523
Y + W +HYYY G CSW W+YP+HYAP+ SD+KD + FELG PF PF QLL V
Sbjct: 461 YVRAIQWNLHYYYNGCCSWSWYYPHHYAPYISDIKDFKDLKLEFELGEPFLPFEQLLAVL 520
Query: 524 PSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEV 583
P+ S LP ++ L+ + +SPI +YPTDF+ D+NGK+ W+ + +PFIDE LL +
Sbjct: 521 PAYSKDLLPVTFQSLLVEKDSPIISYYPTDFKTDLNGKQQEWEAVVLIPFIDEKLLLAAM 580
Query: 584 KKIEHTLTEEEARRNS 599
+ LT EE +RN+
Sbjct: 581 QPHLSKLTPEEKQRNA 596
>gi|66359900|ref|XP_627128.1| Rat1 Kar1/Rat1 like 5'-3' exonuclease [Cryptosporidium parvum Iowa
II]
gi|46228551|gb|EAK89421.1| Rat1 Kar1/Rat1 like 5'-3' exonuclease [Cryptosporidium parvum Iowa
II]
Length = 1350
Score = 196 bits (499), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 118/349 (33%), Positives = 173/349 (49%), Gaps = 45/349 (12%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRR++ + + + E ++EF + G K P + +DSNVITPGT FM L
Sbjct: 108 MNQQRSRRYKTALEMDYNRRAYEIAQEEFSKIGYKCPEYVEK--WDSNVITPGTPFMERL 165
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
++ L YI + D W I VI SD+N+PGEGEHKI+ ++R QR+ Y+PNTRH LY
Sbjct: 166 TMCLHAYIRRKFETDESWRSISVIFSDSNIPGEGEHKILEFIRNQRSNEDYNPNTRHVLY 225
Query: 121 GLDADLIMLALATHEVHFSILREVVF-----TPGQQDKCFLCG----QPGHLAANCEGKA 171
G DADLIML L+THE +F I+RE V +P + HL ++
Sbjct: 226 GSDADLIMLGLSTHESYFYIIREAVRDFKVESPSSISILYNTWIEKINNNHLGSSFGDNG 285
Query: 172 KRKAGEFDEKGDEVVVPK--KPYQFLHIWT---------LREYLDYEF------------ 208
+ + G P K + W+ LREYL+++F
Sbjct: 286 TNNSSDIILNGIFQNGPNFGKKLRIYSWWSDIEIVDLSMLREYLNFDFGEIRDQIGYINN 345
Query: 209 -----------RIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAV 257
N F+ D E +DDFIF+CFF+GNDFLP++P I +G+++ ++ +
Sbjct: 346 NIGENLVNEYGMKNNSDFQYDFERCIDDFIFLCFFIGNDFLPNLPVFSIYKGSLDQILGI 405
Query: 258 YKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHA 306
Y + +G YLT + F + + E I + +R QR +
Sbjct: 406 YIRVLPRIGDYLTLEGNIIPNSIIQFFKYLRDLEYEIIIQESRFSQRTS 454
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 94/175 (53%), Gaps = 12/175 (6%)
Query: 455 ETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDL-----------DQF 503
E V + Y GL WV+ YYY GV SW W+YPYHYAP+ D+ +L +
Sbjct: 696 EISDQVCIHYLRGLSWVLGYYYHGVPSWDWYYPYHYAPYVMDIVELLSDVKNENKIKESL 755
Query: 504 NISFELGHPFKPFNQLLGVFPSASSH-ALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKR 562
F LG PF F QL+ V P S LP+ + +M D ++P+S+FYP+ F+ D NG +
Sbjct: 756 IGEFNLGKPFTQFEQLMSVLPPKSGKICLPKEFYNMMIDKDNPLSEFYPSKFKQDPNGNK 815
Query: 563 YSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASI 617
W+ +A LPFID+ LL+ V +E+ + RN + D+L+ PL I
Sbjct: 816 QRWKWVALLPFIDQKVLLETVIPLENEMDVLSKYRNKLGCDILYSFKFSPLKNII 870
>gi|452819063|gb|EME26163.1| 5'-3' exoribonuclease, partial [Galdieria sulphuraria]
Length = 537
Score = 196 bits (498), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 99/224 (44%), Positives = 138/224 (61%), Gaps = 8/224 (3%)
Query: 386 IVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKF 445
+ + E E Q+ KE+F+ +LKE L K + ED V+LGE GWKERYYE+KF
Sbjct: 78 LSQVEYMLELSDQQVKEQFEKELKERLYKKRVV----DSVEDVVRLGEQGWKERYYEKKF 133
Query: 446 N-AKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKD--LDQ 502
+ + E + R+++ +Y EGL WVM YYY G SW W++PYHYAPFASDL +
Sbjct: 134 HWSPQSETSQRKREELAYKYFEGLLWVMRYYYRGCVSWTWYFPYHYAPFASDLAACPFEA 193
Query: 503 FNISFELGHPFKPFNQLLGVFP-SASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGK 561
++ +E G PF+P QL+ V P S++ LP+ +LM DP+S + FYP DF +D+ GK
Sbjct: 194 DSVQYERGKPFRPLEQLMAVLPPSSAKEVLPKSLTQLMMDPHSELKPFYPDDFVIDLEGK 253
Query: 562 RYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 605
R+ WQG+A LPF+D L + V+ E + T EE RNSI +L
Sbjct: 254 RFVWQGVALLPFVDAFLLENAVRNAEESFTLEERERNSIGETIL 297
>gi|449018780|dbj|BAM82182.1| exonuclease [Cyanidioschyzon merolae strain 10D]
Length = 829
Score = 194 bits (494), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 127/324 (39%), Positives = 168/324 (51%), Gaps = 36/324 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR++K+A ER+ E G L + FDSN ITPGT FM L
Sbjct: 91 MNQQRSRRFRSAKEA-------ERVLAEAIARG-DLEDGFIEERFDSNCITPGTAFMDRL 142
Query: 61 SIALQYYIHLRLNNDPGWEK-IKVILSDANVPGEGEHKIMSYVRLQRNLPGY--DPNTRH 117
S A + +I ++ ND W+ KV+ S VPGEGEHKIM +R + + D RH
Sbjct: 143 SQAFREWIDYKMRNDRAWQTGCKVVFSGPEVPGEGEHKIMEMIREIKRQHRHRGDMPIRH 202
Query: 118 CLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCF----------------LCGQPG 161
C+YGLDADLIML L THE +F++LRE + G+ + + G
Sbjct: 203 CMYGLDADLIMLGLVTHEPYFALLREKLVYRGRIGERLGAAARSPPITSLSNPAAASESG 262
Query: 162 HLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEF-------RIPNPP 214
+ A R+ G D + + + + L I LR+ L EF R PP
Sbjct: 263 DNSPLARALAARRMGLVDAPAN--LDDFEEFHLLEINLLRDELYKEFAELASRQRSDAPP 320
Query: 215 FEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSK 274
F +DLE IVDDF+FM VGNDFLPH+P L+I +GA+ LL YK+ +GGYLTD +
Sbjct: 321 FHVDLERIVDDFMFMGVLVGNDFLPHLPHLDISDGALELLFGAYKELLPIMGGYLTDKHR 380
Query: 275 PSLRRVEHFIQAVGSYEDRIFQKR 298
R+E F + E F +R
Sbjct: 381 IHPDRLEAFAARLAEEERAYFNRR 404
Score = 174 bits (442), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/202 (44%), Positives = 120/202 (59%), Gaps = 8/202 (3%)
Query: 402 EEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPG-WKERYYEEKF--NAKTPEEREETRK 458
E F A+L E ++ FN +E+ + +P ++ YY +KF N P+ E R
Sbjct: 387 EAFAARLAE---EERAYFNRRGVDENIQEYCDPERYRVAYYRDKFRLNLDAPDGNERLRG 443
Query: 459 DVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQ 518
V+ Y EGL WV+ YY+ G SW W+YPY++AP SDL+DL + + F G PF P Q
Sbjct: 444 QVIQSYLEGLHWVLQYYHHGCPSWTWYYPYYFAPLCSDLRDLGSYKVRFLKGKPFTPLTQ 503
Query: 519 LLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEAR 578
LLGV P SS LP YR+LM D SP+ DFYP +F D+NGKR+ W+ + LPFI+E R
Sbjct: 504 LLGVLPPESSGELPPPYRQLMLDLESPVRDFYPAEFRTDLNGKRFDWEAVVLLPFIEERR 563
Query: 579 LLDEVKKIE--HTLTEEEARRN 598
LL+ V I+ LT EE RR+
Sbjct: 564 LLEAVGSIDPHRELTSEERRRD 585
>gi|261332676|emb|CBH15671.1| 5'-3' exoribonuclease 2, putative [Trypanosoma brucei gambiense
DAL972]
Length = 801
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 115/308 (37%), Positives = 165/308 (53%), Gaps = 42/308 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+++ A+ + +G LP + +D NVITP T FM L
Sbjct: 109 MNQQRSRRFRAAEERAEGEVMSAKCADVLLEKG--LPYPKVRERWDHNVITPSTPFMERL 166
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+A+++++ ++N DP W+K+ V+ SDA+VPGEGEHKIM Y+R R PGYDP+T H +Y
Sbjct: 167 GLAIEWFVVKKVNEDPLWKKVAVVFSDAHVPGEGEHKIMQYIRGLRMQPGYDPDTSHVIY 226
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G+DADLI L L+THE +ILR Q ++ F H GK
Sbjct: 227 GMDADLISLGLSTHEKSVTILR------NQLNETF---NAAH------GK---------- 261
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
+ + + RE L +F + E+ E +VDDFIF+CFFVGNDFLPH
Sbjct: 262 -----------FCYFSLVKFRECLKRDF---DGIKEMSFERVVDDFIFLCFFVGNDFLPH 307
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P + I+ + LL+ Y EF A YLTDG + + + F+ + + + +
Sbjct: 308 VPLISIKTRGVELLLDHYVNEF-ASHSYLTDGGEVRFKALSSFLARFLNDYGSVLRDESS 366
Query: 301 LHQRHAER 308
+R ER
Sbjct: 367 FGERAKER 374
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 102/213 (47%), Gaps = 28/213 (13%)
Query: 403 EFKAKLKELLRDKSDAFN-SDNPEE--------------DKVKLG----EPGWKERYYEE 443
E K L + RDK++A SD + DK LG + ++++YY++
Sbjct: 389 ELKKVLASVKRDKTNAQEVSDTAHKLMVSALKERVSFVGDKGSLGFTYHDEDYRDKYYQK 448
Query: 444 KFNAKTPEEREETRKDV---VLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDL 500
KF PE+R + K V Y G WVM YY G SW WFYPYHYAP DL
Sbjct: 449 KFGWD-PEKRSKFEKRVKRCCAEYLRGTQWVMRYYTSGCPSWNWFYPYHYAPLLDDLARF 507
Query: 501 -DQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMN 559
D ++ FE G P P QLL V P S LP + DPNS FYP +VD +
Sbjct: 508 TDSVDVEFERGTPRHPVVQLLAVLPRMSVGGLPVELHGAVLDPNSVFGPFYPDHVDVDYS 567
Query: 560 GKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTE 592
+++QG+ +LPFID E++ TL E
Sbjct: 568 EAIFAYQGVLRLPFID----CKEIEAACDTLVE 596
>gi|71747618|ref|XP_822864.1| 5'-3' exoribonuclease XRND [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70832532|gb|EAN78036.1| 5'-3' exoribonuclease XRND, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 801
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 115/308 (37%), Positives = 165/308 (53%), Gaps = 42/308 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+++ A+ + +G LP + +D NVITP T FM L
Sbjct: 109 MNQQRSRRFRAAEERAEGEVMSAKCADVLLEKG--LPYPKVRERWDHNVITPSTPFMERL 166
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+A+++++ ++N DP W+K+ V+ SDA+VPGEGEHKIM Y+R R PGYDP+T H +Y
Sbjct: 167 GLAIEWFVVKKVNEDPLWKKVAVVFSDAHVPGEGEHKIMQYIRGLRMQPGYDPDTSHVIY 226
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G+DADLI L L+THE +ILR Q ++ F H GK
Sbjct: 227 GMDADLISLGLSTHEKSVTILR------NQLNETF---NAAH------GK---------- 261
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
+ + + RE L +F + E+ E +VDDFIF+CFFVGNDFLPH
Sbjct: 262 -----------FCYFSLVKFRECLKRDF---DGIKEMSFERVVDDFIFLCFFVGNDFLPH 307
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P + I+ + LL+ Y EF A YLTDG + + + F+ + + + +
Sbjct: 308 VPLISIKTRGVELLLDHYVNEF-ASHSYLTDGGEVRFKALSSFLARFLNDYGSVLRDESS 366
Query: 301 LHQRHAER 308
+R ER
Sbjct: 367 FGERAKER 374
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 103/213 (48%), Gaps = 28/213 (13%)
Query: 403 EFKAKLKELLRDKSDAFN-SDNPEE--------------DKVKLG----EPGWKERYYEE 443
E K L + RDK++A SD + DK LG + ++++YY++
Sbjct: 389 ELKKVLASVKRDKTNAQEVSDTAHKLMVSALKERVSFVGDKGSLGFTYHDEDYRDKYYQK 448
Query: 444 KFNAKTPEEREETRKDV---VLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDL 500
KF PE+R + K V Y G WVM YY G SW WFYPYHYAP DL
Sbjct: 449 KFGWD-PEKRSKFEKRVKRCCAEYLRGTQWVMRYYTSGCPSWNWFYPYHYAPLLDDLARF 507
Query: 501 -DQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMN 559
D ++ FE G P P QLL V P S LP + DPNS FYP +VD +
Sbjct: 508 TDSVDVEFERGTPRHPVVQLLAVLPRMSVGGLPVELHGAVLDPNSVFGPFYPDHVDVDYS 567
Query: 560 GKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTE 592
+++QG+ +LPFID E++ +TL E
Sbjct: 568 EAIFAYQGVLRLPFID----CKEIEAACNTLVE 596
>gi|255072731|ref|XP_002500040.1| predicted protein [Micromonas sp. RCC299]
gi|226515302|gb|ACO61298.1| predicted protein [Micromonas sp. RCC299]
Length = 249
Score = 194 bits (492), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 97/146 (66%), Positives = 118/146 (80%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+++A + E+E+LR++ REG +PP+ S+ FDSNVITPGT FM L
Sbjct: 57 MNQQRSRRFRAAQEAKEKEEEDEKLREKLRREGVNVPPRQKSEAFDSNVITPGTPFMGRL 116
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S ALQYY+H R+N DP W +KVI+SDA+VPGEGEHK M Y+R QR L G+DPNT+H +Y
Sbjct: 117 SAALQYYVHQRMNTDPAWRGVKVIMSDASVPGEGEHKAMHYIRQQRGLKGFDPNTKHVVY 176
Query: 121 GLDADLIMLALATHEVHFSILREVVF 146
GLDADLIMLALATHE +F ILREVVF
Sbjct: 177 GLDADLIMLALATHEPNFWILREVVF 202
>gi|221485905|gb|EEE24175.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 2042
Score = 193 bits (490), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 119/309 (38%), Positives = 161/309 (52%), Gaps = 76/309 (24%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQ-EFEREGRKLPPKSDSQV--------FDSNVIT 51
MNQQR+RR+RA+KDAA+ A ++E R + +R+ K K + + FDSN I+
Sbjct: 93 MNQQRARRYRAAKDAAELARQKEEHRLLKMQRKQDKAAAKQEKNLSAPTPGGHFDSNCIS 152
Query: 52 PGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGY 111
PGTEFMA L+++ +LN D W+ +KV+LS +VPGEGEHKIM ++R ++ P
Sbjct: 153 PGTEFMAKFFRHLRFFCEKKLNEDARWKDLKVVLSGPDVPGEGEHKIMQFIRCAKSDPHT 212
Query: 112 DPNTRHCLYGLDADLIMLALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGK 170
N RHCLYGLDADLIML+LA+HE HF +LR EVVF GK
Sbjct: 213 GRNVRHCLYGLDADLIMLSLASHEPHFCLLREEVVF----------------------GK 250
Query: 171 AKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIP----NPPFEID-------- 218
A + + D ++ ++ Q LHI LREYL EF PP E D
Sbjct: 251 AVSRGPQ-----DRMLTKRENLQLLHISLLREYLFLEFAAAALRSTPPKESDEHPKRSET 305
Query: 219 ---------------------------LECIVDDFIFMCFFVGNDFLPHMPTLEIREGAI 251
E I+DD++ CF VGNDFLPH +I +G +
Sbjct: 306 ASTSEADALDTKAAAIALCPSLLYPRERERIIDDYVLFCFMVGNDFLPHPKATDIADGGL 365
Query: 252 NLLMAVYKK 260
+LLM+ YK+
Sbjct: 366 DLLMSCYKE 374
Score = 139 bits (351), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 118/233 (50%), Gaps = 21/233 (9%)
Query: 391 NSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKF--NAK 448
++ ETD + +K R+KS+ P + L ++E +Y +K +A
Sbjct: 415 DTVETDLLQEWAADSQWMKSKRRNKSEVEEERRPASEDALLA---YRESFYLKKMGMDAS 471
Query: 449 TPEEREETRKDVVLRYTEGLCWVMHYYYEG--VCSWQWFYPYHYAPFASD---------- 496
TPE R++ + + + Y EGL WV++YYY G W WFYP+HYAPF +D
Sbjct: 472 TPEGRKQIDR-LAVDYLEGLQWVLYYYYRGPQYSGWTWFYPHHYAPFMTDVLSCSFFTEG 530
Query: 497 ---LKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTD 553
L DL + I F P+ PF QLL + P S+ LP+ R ++ P + ++P D
Sbjct: 531 VKQLADLRRKEIRFPASKPYAPFMQLLSILPPKSASLLPKALRPILLSPTPELLPYFPDD 590
Query: 554 FEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 606
FEVDM G SW G+ LPFIDE L E + LT EE +RN+ ++L
Sbjct: 591 FEVDMEGCTVSWGGVTLLPFIDEMLLHREALPLFSKLTGEEQQRNTRGKNVLL 643
>gi|237835011|ref|XP_002366803.1| 5'-3' exonuclease, putative [Toxoplasma gondii ME49]
gi|211964467|gb|EEA99662.1| 5'-3' exonuclease, putative [Toxoplasma gondii ME49]
gi|221503733|gb|EEE29417.1| 5'->3' exoribonuclease, putative [Toxoplasma gondii VEG]
Length = 2042
Score = 192 bits (488), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 119/309 (38%), Positives = 161/309 (52%), Gaps = 76/309 (24%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQ-EFEREGRKLPPKSDSQV--------FDSNVIT 51
MNQQR+RR+RA+KDAA+ A ++E R + +R+ K K + + FDSN I+
Sbjct: 93 MNQQRARRYRAAKDAAELARQKEEHRLLKMQRKQDKAAAKQEKNLSAPTPGGHFDSNCIS 152
Query: 52 PGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGY 111
PGTEFMA L+++ +LN D W+ +KV+LS +VPGEGEHKIM ++R ++ P
Sbjct: 153 PGTEFMAKFFRHLRFFCEKKLNEDARWKDLKVVLSGPDVPGEGEHKIMQFIRCAKSDPHT 212
Query: 112 DPNTRHCLYGLDADLIMLALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGK 170
N RHCLYGLDADLIML+LA+HE HF +LR EVVF GK
Sbjct: 213 GRNVRHCLYGLDADLIMLSLASHEPHFCLLREEVVF----------------------GK 250
Query: 171 AKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIP----NPPFEID-------- 218
A + + D ++ ++ Q LHI LREYL EF PP E D
Sbjct: 251 AVSRGPQ-----DRMLTKRENLQLLHISLLREYLFLEFAAAALRSTPPKESDEHPKRSET 305
Query: 219 ---------------------------LECIVDDFIFMCFFVGNDFLPHMPTLEIREGAI 251
E I+DD++ CF VGNDFLPH +I +G +
Sbjct: 306 ASTSEADALDTKAAAIALCPSLLYPRERERIIDDYVLFCFMVGNDFLPHPKATDIADGGL 365
Query: 252 NLLMAVYKK 260
+LLM+ YK+
Sbjct: 366 DLLMSCYKE 374
Score = 139 bits (351), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 118/233 (50%), Gaps = 21/233 (9%)
Query: 391 NSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKF--NAK 448
++ ETD + +K R+KS+ P + L ++E +Y +K +A
Sbjct: 415 DTVETDLLQEWAADSQWMKSKRRNKSEVEEERRPASEDALLA---YRESFYLKKMGMDAS 471
Query: 449 TPEEREETRKDVVLRYTEGLCWVMHYYYEG--VCSWQWFYPYHYAPFASD---------- 496
TPE R++ + + + Y EGL WV++YYY G W WFYP+HYAPF +D
Sbjct: 472 TPEGRKQIDR-LAVDYLEGLQWVLYYYYRGPQYSGWTWFYPHHYAPFMTDVLSCSFFTEG 530
Query: 497 ---LKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTD 553
L DL + I F P+ PF QLL + P S+ LP+ R ++ P + ++P D
Sbjct: 531 VKQLADLRRKEIRFPASKPYAPFMQLLSILPPKSASLLPKALRPILLSPTPELLPYFPDD 590
Query: 554 FEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 606
FEVDM G SW G+ LPFIDE L E + LT EE +RN+ ++L
Sbjct: 591 FEVDMEGCTVSWGGVTLLPFIDEILLHREALPLFSKLTGEEQQRNTRGKNVLL 643
>gi|312371117|gb|EFR19377.1| hypothetical protein AND_22598 [Anopheles darlingi]
Length = 380
Score = 192 bits (488), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 115/297 (38%), Positives = 161/297 (54%), Gaps = 42/297 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++ +A E+L+ + G +P D FDSN ITPGT FM L
Sbjct: 94 MNQQRGRRFRSAHEAG------EQLKAAIAK-GETIP---DEDRFDSNCITPGTAFMVRL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
AL+++I +++ D W+ VILS PGEGEHKIM Y+R + PG++PNTRHCLY
Sbjct: 144 QKALEHFIQVKIATDILWKACTVILSGHETPGEGEHKIMEYIRHAKAQPGFNPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L THE FS+LRE V K G+ D+
Sbjct: 204 GLDADLIMLGLCTHERFFSLLREEV----------------------------KFGKNDK 235
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEF-RIPNPP-FEIDLECIVDDFIFMCFFVGNDFL 238
K V+ + + LH+ L EYL+ EF + N F D+ ++DD+I M + VGNDF+
Sbjct: 236 KA--TVMKEIRFYLLHLTLLSEYLELEFASVRNKLRFPFDIHKLIDDWILMIYLVGNDFI 293
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 295
PH+P L I E A+ L Y + GY+ + +L R++ ++ + ++ F
Sbjct: 294 PHLPNLHINENALPTLYRAYMDVLPEMDGYINESGILNLPRLQLLMRRLAVFDRDTF 350
>gi|401420072|ref|XP_003874525.1| putative exoribonuclease 2 [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322490761|emb|CBZ26025.1| putative exoribonuclease 2 [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 893
Score = 192 bits (488), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 115/275 (41%), Positives = 151/275 (54%), Gaps = 51/275 (18%)
Query: 1 MNQQRSRRFRASKDA----ADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEF 56
MNQQRSRRFRA+ + A S A +R+ E+ LP + +D NVITP T F
Sbjct: 109 MNQQRSRRFRAADERLESDAISNACADRIVSEYH-----LPRPRVRERWDHNVITPSTAF 163
Query: 57 MAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTR 116
M +++AL++YI +LN D GW + V+ SDA+VPGEGEHKIM Y+R R+ PGYD NT
Sbjct: 164 MERVALALEWYIMKKLNEDAGWRHLTVVFSDAHVPGEGEHKIMQYIRGLRSQPGYDYNTS 223
Query: 117 HCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAG 176
H ++G+DADLI L L+THE H ILR + Q D C
Sbjct: 224 HVIHGMDADLICLGLSTHEKHVCILRNQLTETFQPDHNRFC------------------- 264
Query: 177 EFDEKGDEVVVPKKPYQFLHIWTLREYLDYEF-RIPNPPFEIDLECIVDDFIFMCFFVGN 235
+ ++ T RE L +F I FE +VDDFIF+CFFVGN
Sbjct: 265 -----------------YFNLSTYREKLMQDFANIEGMQFER----VVDDFIFLCFFVGN 303
Query: 236 DFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLT 270
DFLPH+P + I+ I +L+ Y ++F AL GYLT
Sbjct: 304 DFLPHVPLVSIKTRGIEMLLDHYVRDF-ALHGYLT 337
Score = 116 bits (290), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 85/168 (50%), Gaps = 8/168 (4%)
Query: 427 DKVKLG----EPGWKERYYEEKFNAKTPEEREETRKDVVL---RYTEGLCWVMHYYYEGV 479
DK LG + +++ YY+ KF R + + L Y G+ WVM YY +G
Sbjct: 429 DKQPLGFSYLDKTYRDAYYQHKFGWDPSTNRAAFERQIRLCCAEYLRGMQWVMRYYTKGC 488
Query: 480 CSWQWFYPYHYAPFASDLKDLD-QFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKL 538
SW+W++PYHYAP DL N+ + P P QLL V P S HALPE +
Sbjct: 489 PSWEWYFPYHYAPLLQDLAAFTATVNVEMRMSAPLHPVEQLLAVLPRLSVHALPEELHEA 548
Query: 539 MTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKI 586
+ DP S + FYP VD + +S+QG+ ++PFI+ L +++
Sbjct: 549 VNDPKSVLGKFYPAIVNVDFSEANFSYQGVLRIPFINCEALSKACRQL 596
>gi|401405148|ref|XP_003882024.1| putative 5'-3' exonuclease [Neospora caninum Liverpool]
gi|325116438|emb|CBZ51991.1| putative 5'-3' exonuclease [Neospora caninum Liverpool]
Length = 2070
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/306 (39%), Positives = 160/306 (52%), Gaps = 73/306 (23%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQ-EFEREGRKLPPKS--DSQVFDSNVITPGTEFM 57
MNQQR+RR+RA+KDAA+ A ++E R + +R+ K P+S FDSN I+PGTEFM
Sbjct: 93 MNQQRARRYRAAKDAAELARQKEEHRLLKMQRKQDKSAPQSPPSGGHFDSNCISPGTEFM 152
Query: 58 AVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRH 117
A L+++ +LN D W+ +KV+LS +VPGEGEHKIM ++R ++ P N RH
Sbjct: 153 AKFFRHLRFFCEKKLNEDARWKHLKVVLSGPDVPGEGEHKIMQFIRCSKSDPHSGRNVRH 212
Query: 118 CLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAG 176
CLYGLDADLIML+LA+HE HF +LRE VVF GKA K
Sbjct: 213 CLYGLDADLIMLSLASHEPHFCLLREEVVF----------------------GKAVTKGP 250
Query: 177 EFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPN-----------------------P 213
+ D ++ ++ Q LHI LREYL EF
Sbjct: 251 Q-----DRLLTKRENLQLLHISLLREYLFLEFAAVALRAAPALKSSSNEKEQPSRADGAA 305
Query: 214 PFEI-------------------DLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLL 254
P EI + E I+DD++ CF VGNDFLPH +I +G ++LL
Sbjct: 306 PAEIVFDASLGSPSLRPSLLYPRERERIIDDYVLFCFMVGNDFLPHPKATDIADGGLDLL 365
Query: 255 MAVYKK 260
M YK+
Sbjct: 366 MTCYKE 371
Score = 130 bits (328), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 104/189 (55%), Gaps = 18/189 (9%)
Query: 435 GWKERYYEEKF--NAKTPEEREETRKDVVLRYTEGLCWVMHYYYEG--VCSWQWFYPYHY 490
+++ +Y +K + TPE R++ + + + Y EGL WV++YY+ G W WFYP+HY
Sbjct: 454 AYRQAFYLKKMGMDGHTPEGRKQIDR-LAVDYLEGLQWVLYYYFRGPHYSGWDWFYPHHY 512
Query: 491 APFASD-------------LKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRK 537
APF +D L DL + I F P+ PF QLL + P S+ LP+ R+
Sbjct: 513 APFMTDVLCCSFFTEGVKDLADLRRKEIRFPASKPYAPFMQLLSILPPKSASLLPKALRQ 572
Query: 538 LMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARR 597
++ P+ + ++PTDFEVDM G W G+ LPFI+E L E + LT EEARR
Sbjct: 573 ILLSPSLELLPYFPTDFEVDMEGCTVPWGGVTLLPFIEEKLLYKEALPLFSKLTGEEARR 632
Query: 598 NSIMADMLF 606
N+ ++L
Sbjct: 633 NTRGKNVLL 641
>gi|123469987|ref|XP_001318202.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
gi|121900955|gb|EAY05979.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
Length = 797
Score = 189 bits (480), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 127/345 (36%), Positives = 182/345 (52%), Gaps = 37/345 (10%)
Query: 1 MNQQRSRRFRASKDAA-DSAAEEERLRQEFERE-GRKLPPKSDSQVFDSNVITPGTEFMA 58
MNQQR RRF A+K AA D + + ++ E E +L + DSNVITPGT F
Sbjct: 111 MNQQRKRRFFAAKQAAHDRWIKYWKAQKSGETELAAELYNPDYLKNHDSNVITPGTLFFE 170
Query: 59 VLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHC 118
LS L +I + DP W KI VILSDA+VPGEGEHKIM +VR QR P YD N H
Sbjct: 171 RLSKHLHGFIQRKQETDPAWGKICVILSDASVPGEGEHKIMDFVRAQRLEPQYDSNRHHV 230
Query: 119 LYGLDADLIMLALATHEVHFSILREVVFTP-------GQQDKCFLCGQPGHLAANCEGKA 171
+YGLDAD+I L LA+HE +++ILRE + QQ K A + K
Sbjct: 231 IYGLDADIIFLGLASHEPYWTILRERINEAKDLPRQNSQQKK----------ATEEDEKM 280
Query: 172 KRKAGEFD---EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPN--PPFEIDLECIVDDF 226
FD EK ++ K + F+ +W LR+YL+ + + N P DLE +DDF
Sbjct: 281 ALHHQIFDAPEEKEKVDLIGPKHFDFVSLWILRQYLERDLKPRNLPPNLPWDLERAIDDF 340
Query: 227 IFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQA 286
IF+C+ GNDF+P +P I EG ++ ++ +YK YLT + R + F++
Sbjct: 341 IFICYGCGNDFIPTLPGFSIAEGTVSDIICLYKNNLPRYNAYLTYNGQVDFPRFKDFMKL 400
Query: 287 V------GSYEDRIFQKRARLH----QRHAERIKREKAQARRGDD 321
+ G Y +F++ + LH ++ +E I+++ + + D
Sbjct: 401 ICDERRTGEY---VFERNSLLHILCPEQRSEEIEKQVNKISQAPD 442
Score = 137 bits (345), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 105/179 (58%), Gaps = 12/179 (6%)
Query: 437 KERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASD 496
K YY++KF+A+T EE + +V +T G+ W ++YY G +W W YPYH AP +SD
Sbjct: 485 KRVYYKQKFHAETKEEIAK----IVTEFTRGMIWTLNYYLHGTHNWDWSYPYHSAPCSSD 540
Query: 497 --LKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDF 554
L D++ F+ G PF P QL+ V P S+HALPE + LMT+ SPI DFYPT F
Sbjct: 541 WDLVDVNPATYQFDRGCPFLPLWQLMAVLPPQSAHALPEKMQFLMTNEKSPIKDFYPTTF 600
Query: 555 EVDMNGKRYSWQGIAKLPFIDEA------RLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
+D+ G + +++G +PFI EA R+ D +K + LT EE +RN +F+
Sbjct: 601 SIDLEGAKQAYKGHVLVPFIGEANTDWDKRISDVMKGTDLRLTYEEEQRNQFSPTYIFL 659
>gi|154345762|ref|XP_001568818.1| putative exoribonuclease 2 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134066160|emb|CAM43950.1| putative exoribonuclease 2 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 899
Score = 189 bits (479), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 124/328 (37%), Positives = 166/328 (50%), Gaps = 57/328 (17%)
Query: 1 MNQQRSRRFRASKDA----ADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEF 56
MNQQRSRRFRA+ + A S A +R+ E+ LP + +D NVITP T F
Sbjct: 109 MNQQRSRRFRAADERLESDAISNACADRIVSEYS-----LPRPRVRERWDHNVITPSTAF 163
Query: 57 MAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTR 116
M +++AL++YI +LN D W + V+ SDA+VPGEGEHKIM Y+R R+ PGYD NT
Sbjct: 164 MERVALALEWYIMKKLNEDAEWRHLTVVFSDAHVPGEGEHKIMQYIRGLRSQPGYDYNTT 223
Query: 117 HCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAG 176
H ++G+DADLI L L+THE H ILR + Q D C
Sbjct: 224 HVIHGMDADLICLGLSTHEKHVCILRNQLTETFQPDHNRFC------------------- 264
Query: 177 EFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGND 236
Y L ++ ++ D+ I FE +VDDFIF+CFFVGND
Sbjct: 265 ---------------YFNLQMYRMKLMKDFA-NIEGMQFER----VVDDFIFLCFFVGND 304
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDR--- 293
FLPH+P + I+ I LL+ Y ++F AL GYLT + + F+ S
Sbjct: 305 FLPHVPLVSIKTRGIELLLDHYVRDF-ALHGYLTHLGEVDYAHLHIFLMNFASKCMIKLT 363
Query: 294 -----IFQKRARLHQRHAERIKREKAQA 316
I + R R Q ERI + +AQ
Sbjct: 364 KEYYGIVRARERAKQHVEERITKTEAQV 391
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 81/155 (52%), Gaps = 4/155 (2%)
Query: 436 WKERYYEEKFNAKTPEEREETRKDVVL---RYTEGLCWVMHYYYEGVCSWQWFYPYHYAP 492
+++ YY++KF R + L Y G+ WVM YY +G SW+W++PYHYAP
Sbjct: 442 YRDAYYQQKFGWDHSINRAAFENQIRLCCAEYLRGMQWVMRYYTKGCPSWEWYFPYHYAP 501
Query: 493 FASDLKDLD-QFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYP 551
DL N+ + P P QLL V P S HALPE + + DP S + FYP
Sbjct: 502 LLQDLAAFTATVNVEMRMSAPLHPVEQLLAVLPRLSVHALPEELHEAVNDPKSLLGKFYP 561
Query: 552 TDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKI 586
+VD + +S+QG+ ++PFI+ L +K+
Sbjct: 562 DMVDVDFSEANFSYQGVLRIPFINCEALSRACRKL 596
>gi|209878396|ref|XP_002140639.1| XRN 5'-3' exonuclease domain-containing protein [Cryptosporidium
muris RN66]
gi|209556245|gb|EEA06290.1| XRN 5'-3' exonuclease domain-containing protein [Cryptosporidium
muris RN66]
Length = 1610
Score = 189 bits (479), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 111/301 (36%), Positives = 155/301 (51%), Gaps = 84/301 (27%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR+++DAA L +E + K+++ FDSN ITPGT FM L
Sbjct: 100 MNQQRSRRFRSARDAA--------LMEELAVRNSEFANKTNT--FDSNCITPGTSFMYEL 149
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L++++H ++ NDP W ++VILS +++PGEGEHKIM Y+R ++ P Y+ NTRHCLY
Sbjct: 150 NRQLKFFVHYQIQNDPIWRNLEVILSGSDIPGEGEHKIMDYIRCIKSQPDYNNNTRHCLY 209
Query: 121 GLDADLIMLALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADLIML+LA+HE HFS+LR E+ F P +
Sbjct: 210 GLDADLIMLSLASHEPHFSLLREEIKFVPSKV---------------------------- 241
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYL---------------------------------DY 206
+ ++ K +QFLHI LREYL D
Sbjct: 242 -LDNRIIFTKDKFQFLHISILREYLVRELNPIYSVSKLDLNVRYMEEMGVQDIVSGCKDE 300
Query: 207 EFRIPNPP-----------FEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLM 255
+ P F++D E ++DDFIF+ + VGNDFLPH+P + G +L
Sbjct: 301 SITVTTPKLVQSSFNINLDFKMDEERLIDDFIFLGYIVGNDFLPHIPFHTVDNGLDRILC 360
Query: 256 A 256
+
Sbjct: 361 S 361
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 95/184 (51%), Gaps = 42/184 (22%)
Query: 447 AKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDL------ 500
+K E ET +D+V Y EGL W+ +YY+ G SW+WFY Y YAP+A D+ +
Sbjct: 494 SKRDELVFETLEDLVFCYLEGLQWISYYYFRGTPSWRWFYSYRYAPYACDIAAILNHWLR 553
Query: 501 ---------DQFNISFE------------------------LGHPFKPFNQLLGVFPSAS 527
+ N+S E LG P +PF QL+GV PS S
Sbjct: 554 LGKITRVNKSEMNLSMESDILNIEKMYKDGIHLNNMVFQYILGTPLQPFEQLMGVLPSRS 613
Query: 528 SHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIE 587
S+ LPE +R+L + SPI D+YP+ F++DM G + W G+ +PFIDE LL K I
Sbjct: 614 SNLLPEPFRRLFMNKKSPIIDYYPSQFDIDMEGIKVPWGGVTLIPFIDEELLL---KSIS 670
Query: 588 HTLT 591
+ L+
Sbjct: 671 YVLS 674
>gi|160331478|ref|XP_001712446.1| dhm [Hemiselmis andersenii]
gi|159765894|gb|ABW98121.1| dhm [Hemiselmis andersenii]
Length = 553
Score = 187 bits (476), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/299 (40%), Positives = 164/299 (54%), Gaps = 35/299 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR+ K E E+++ E KL K++ FDSN ITPGTEFM L
Sbjct: 90 MNQQRSRRFRSVK-------ELEKIKTVV-NETSKLS-KNEISFFDSNCITPGTEFMKNL 140
Query: 61 SIALQYYIHLRLNNDPGWEK-IKVILSDANVPGEGEHKIMSYVR-LQRNLPGYDPNTRHC 118
S + + ++ ++ DP W++ VI S + VPGEGEHKIM+Y+R +Q+ RHC
Sbjct: 141 SFSFKKWLENKIKFDPEWQQGCDVIFSGSEVPGEGEHKIMNYIRKIQKFNQNKSKTLRHC 200
Query: 119 LYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEF 178
LYGLDADLIML L HE F++LRE + G Q ++ K K +
Sbjct: 201 LYGLDADLIMLGLVAHENQFTLLREKLIWKGTQQ---------NIKPIDSLKKKNQPA-- 249
Query: 179 DEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPP--FEIDLECIVDDFIFMCFFVGND 236
GDE + L I LR+ L EF+ P F ++E IVDDFIFMC +GND
Sbjct: 250 ---GDE-------FHLLEISLLRDMLYLEFK-PKESWRFTFNIERIVDDFIFMCMLIGND 298
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 295
FLP +P L I G +NLL+ YK+ + GYLT + + RVE F++ + + + F
Sbjct: 299 FLPSLPHLSIASGGLNLLVRSYKEIQKDSKGYLTKKYQMHMGRVELFLEKISNEAEEFF 357
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/176 (43%), Positives = 109/176 (61%), Gaps = 3/176 (1%)
Query: 436 WKERYYEEKFNAKTPEEREETRKDVVLR-YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA 494
+KE YY K N +++ R + + Y +GL W ++YY++G SW WFYP +YAP
Sbjct: 374 YKESYYSSKLNLDYSSGKDKKRLEKLKSDYIQGLNWCLYYYHKGCPSWNWFYPEYYAPLT 433
Query: 495 SDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDF 554
SDLKDL + I F G PF+P QLL V P SS LP + LMTD +SPI +FYP +F
Sbjct: 434 SDLKDLKKIKIKFTKGRPFEPLIQLLSVLPPKSSIFLPLTFANLMTDKDSPILNFYPNNF 493
Query: 555 EVDMNGKRYSWQGIAKLPFIDEARLLDEVKKI--EHTLTEEEARRNSIMADMLFVL 608
++D+NGK+ W+G+ LPFID+ +L+D V + +L +EE RN D++F L
Sbjct: 494 KLDLNGKKNLWEGVVLLPFIDQKKLIDTVNIYGRKESLCKEEKIRNCFGKDVVFFL 549
>gi|397617693|gb|EJK64564.1| hypothetical protein THAOC_14691, partial [Thalassiosira oceanica]
Length = 1534
Score = 187 bits (475), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 123/322 (38%), Positives = 167/322 (51%), Gaps = 44/322 (13%)
Query: 43 QVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYV 102
Q F SN ITPGT F S + +I +L+ DP W+ + +I S +VPGEGEHKIM ++
Sbjct: 383 QGFHSNAITPGTLFFDRCSSRIIAFIREKLDTDPRWKNLTIIFSGHDVPGEGEHKIMDFI 442
Query: 103 RLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILR-EVVFTPGQQDKCFLCGQPG 161
R +++ P YDPN +HC+YG D DL+ML+LATHE H +LR EVVF ++ +
Sbjct: 443 RHEKHKPEYDPNKKHCIYGQDGDLVMLSLATHEPHMCLLREEVVFDMARRKVLERLAKVE 502
Query: 162 HLAANCEGKAKRKAGEFDE-KGDEVVVPKKP-------YQFLHIWTLREYLDYEFRI--- 210
H A E + GE E K ++ P ++ LH+ LR+YL EF
Sbjct: 503 HEKALDE--RAQDVGESSEGKSLPLLSPSIASYIHNANFELLHVSLLRDYLGLEFETQEF 560
Query: 211 --PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKK-------- 260
N F+ LE +DDF+FM FFVGNDFLPHMP L+I + A +LL YKK
Sbjct: 561 YSKNSRFK--LEPTIDDFVFMTFFVGNDFLPHMPALDIGDEAFDLLFYAYKKNRIKWLKD 618
Query: 261 -EFRALGG----------------YLTD-GSKPSLRRVEHFIQAVGSYEDRIFQKRARLH 302
E+R YLTD G+ S R+E F+ VG YED + R
Sbjct: 619 GEYRRTVKITDKNNKTRNKTMHHPYLTDAGNITSGTRLEAFLSDVGGYEDPYYSNRRESM 678
Query: 303 QRHAERIKREKAQARRGDDVEP 324
+ ERI++ +A R + P
Sbjct: 679 EEENERIRKADRKAGRESVLPP 700
Score = 154 bits (389), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 110/193 (56%), Gaps = 26/193 (13%)
Query: 437 KERYYEEKFNAKTPEEREETRKDVVLR--YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA 494
K RYY EKF TP + E K + LR Y +GL W + YYY+G SW WFYPY+Y P
Sbjct: 756 KGRYYYEKFGI-TPFDAE---KHMTLRKEYVKGLVWTLEYYYKGCVSWDWFYPYNYGPMI 811
Query: 495 SDLKDLDQF--NISF----------------ELGHPFKPFNQLLGVFPSASSHALPEHYR 536
SDL +++ +ISF G P +PF QLLG P +SS+ LP+ YR
Sbjct: 812 SDLTNMNSILNDISFFDKDSETQKKGKGVRRVSGEPLRPFEQLLGCLPPSSSYLLPKPYR 871
Query: 537 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKI--EHTLTEEE 594
LMT P SP+ ++YP F VDMNGKR+ W+ + LPFID +L++ + + E L+EEE
Sbjct: 872 WLMTSPESPLKEYYPESFTVDMNGKRWPWEAVTLLPFIDADKLIEASRTLVDESFLSEEE 931
Query: 595 ARRNSIMADMLFV 607
+ N I +F
Sbjct: 932 KKLNVIGQSRVFT 944
>gi|242023600|ref|XP_002432220.1| 5'-3' exoribonuclease, putative [Pediculus humanus corporis]
gi|212517617|gb|EEB19482.1| 5'-3' exoribonuclease, putative [Pediculus humanus corporis]
Length = 1587
Score = 186 bits (472), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 107/299 (35%), Positives = 158/299 (52%), Gaps = 43/299 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MN QR RRF+A+K E E Q+ EG+ +P ++ F+S I+PGTEFM L
Sbjct: 90 MNNQRGRRFQAAK-------ELENENQKLLAEGKPIPDEN----FNSLCISPGTEFMEEL 138
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L Y+I +++ D W+KI VI S PGEGEHKIM Y+R R +DP RHC+Y
Sbjct: 139 DKHLNYFIRKKISTDSMWQKIVVIYSGYKTPGEGEHKIMDYIRYLRTTSDFDPYIRHCIY 198
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
DADL++L LA HE++ SILR + K K+ +E
Sbjct: 199 SSDADLMLLGLALHEINVSILRR--------------------DPDSSSKEKKSNASKEE 238
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPN--PPFEIDLECIVDDFIFMCFFVGNDFL 238
K F+H+ LR+YLD EF+ PFE DLE ++DD+I M F +GNDF+
Sbjct: 239 KN----------IFVHLSILRDYLDLEFQELKGCLPFEYDLEHLIDDWILMTFLMGNDFI 288
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
P++P ++I + +++ YKK + L GY+ +L R + F+ + ++ F++
Sbjct: 289 PNLPNIQIDTNGVLVVLEAYKKIIQTLDGYINLNGYLNLPRFQKFLNKLSEHDMESFRE 347
Score = 155 bits (393), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 124/215 (57%), Gaps = 11/215 (5%)
Query: 394 ETDPQENKEEFKAKLKELLRDKSDAFNSDNPEED--------KVKLGEPGWKER-YYEEK 444
+ D + ++ K+ L+EL++ +D F + EE+ L E K++ YY +K
Sbjct: 368 DDDLSDESQKRKSDLEELIKSTNDMFEFSDEEENHDDDDDDDDTFLFEFKMKKKNYYSDK 427
Query: 445 FNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFN 504
E E+ K++ Y + + W++ YY+ G SW W+YPYHY+PF SD+K+ + +N
Sbjct: 428 MCF--DEMTEDISKNLTKNYIQTIQWILFYYFHGCASWTWYYPYHYSPFLSDIKNFEDYN 485
Query: 505 ISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYS 564
+ + G P PF+QL+ + P++ + LPE Y LM +SP+ DF+P DF+ D+NGK+
Sbjct: 486 LEYNKGEPLLPFDQLVSILPASGKNYLPEVYHDLMNSTDSPLKDFFPDDFKRDLNGKKAD 545
Query: 565 WQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 599
W+ I +PF+D+ +L + + LTE+E RNS
Sbjct: 546 WESIILIPFVDQDEVLKYTTPLRNKLTEKEKIRNS 580
>gi|397626482|gb|EJK68154.1| hypothetical protein THAOC_10694 [Thalassiosira oceanica]
Length = 759
Score = 186 bits (471), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 129/371 (34%), Positives = 184/371 (49%), Gaps = 49/371 (13%)
Query: 374 PRLSSGATIGAAIVEAENSFETDPQE---NKEEFKAKLKELLRDKSDAFNSDNPEEDKVK 430
P +++ A EAE + E D ++ ++ K K+K+L + K D + + +D V+
Sbjct: 46 PEITASAGADDDDEEAEFAPEIDVEKLDAAAKDMKEKIKKLEQTKLDDYAKN--VKDNVR 103
Query: 431 LGEPGWKERYYEEKFNAKTPEEREETRKDVVLR-YTEGLCWVMHYYYEGVCSWQWFYPYH 489
L EPGWK+RYY +K K + RE ++ + R Y +GLCWVM YYY+G SW+W+YP+H
Sbjct: 104 LHEPGWKDRYYTDK--CKADDVREHGGREHLFRSYVKGLCWVMRYYYDGCPSWKWYYPFH 161
Query: 490 YAPFASDLKDLDQFNIS---FELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPI 546
YAPFASDL+++++F F+ PF P QL+ V P S HA+P+ R LM D SPI
Sbjct: 162 YAPFASDLRNIERFQKDCDIFDKSEPFGPVEQLMAVLPEDSRHAVPKGSRWLMRDSESPI 221
Query: 547 SDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 606
DFYP D D NGK W + LPFIDE RLLD ++ T++E NS D +
Sbjct: 222 IDFYPKDVPCDPNGKAMPWLWVVLLPFIDEGRLLDALRPTMAKWTQKELLCNSRGLDDGY 281
Query: 607 VLL--SHPLSASIYTL---DEHCKQLKIKERVEV----------KERLNPELSDGMNGYI 651
V L +PL+ + + E K+ K+ EV + L+ E+ D + I
Sbjct: 282 VFLHKDNPLADKVSKVLGDRETYKKDKLALGDEVSGPSCFFGALRLPLSNEIHDVEDDSI 341
Query: 652 SPCAGDPHPP------------VFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGV 699
P PP VF SPV N+ LC + P H + G
Sbjct: 342 VPL-----PPSAGKIGARSSNDVFSSPVEP------NRALCVAFTEPSIKAHRSEILPGA 390
Query: 700 IFPKKIVQLED 710
P + ED
Sbjct: 391 SIPPPTLTDED 401
>gi|407409729|gb|EKF32447.1| 5'-3' exonuclease XRNA, putative [Trypanosoma cruzi marinkellei]
Length = 807
Score = 185 bits (470), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/318 (35%), Positives = 165/318 (51%), Gaps = 50/318 (15%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+++ + + ++ ++G LPP +D NVITP T FM +
Sbjct: 109 MNQQRSRRFRAAEERIEGEVFSAQCAEDVVKKG--LPPPQTRSRWDHNVITPSTPFMERV 166
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+A++++I ++N DP W I VI SDA+VPGEGEHKIM Y+R R GY+P T H ++
Sbjct: 167 GLAIEWFIMKKINEDPAWRHIAVIFSDAHVPGEGEHKIMHYIRELRVQLGYNPQTSHVIH 226
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G+DADLI L L+THE H +ILR + Q D C
Sbjct: 227 GMDADLICLGLSTHEEHVTILRNQLTETFQPDHNRFC----------------------- 263
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
Y L+ + LR D+ ++D E ++DDF+F+CFFVGNDFLPH
Sbjct: 264 -----------YFSLYKYRLRLRDDF-----GGIGQMDFERVLDDFVFLCFFVGNDFLPH 307
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQ--AVGSYEDR----- 293
+P + I+ I LL+ Y + F+ YLT G + + + F++ VG E
Sbjct: 308 VPLISIKTKGIELLLDHYVRGFKD-HSYLTHGGEVNYGNLTKFLRFFVVGYMEKLKQEYG 366
Query: 294 -IFQKRARLHQRHAERIK 310
+ + + R + ER+K
Sbjct: 367 GVLRAKQRAKAKVEERVK 384
Score = 116 bits (291), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 84/154 (54%), Gaps = 5/154 (3%)
Query: 437 KERYYEEKFNAKTPEEREETRKDVVL---RYTEGLCWVMHYYYEGVCSWQWFYPYHYAPF 493
+++YYE+KF P +RE K + L Y G WVM YY G SW W+YP++YAP
Sbjct: 442 RDKYYEKKFGWD-PADREAFEKKIQLCCAEYLRGTQWVMRYYTTGCPSWDWYYPFYYAPL 500
Query: 494 ASDLKDL-DQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPT 552
DL + N+ LG P P QLL V P S ALPE + DP+S + FYP
Sbjct: 501 LQDLAHFPGKVNVKMTLGAPRHPVLQLLAVLPRLSVEALPEELHDAVKDPDSVLGVFYPE 560
Query: 553 DFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKI 586
+VD + +S+QG+ +LPF++ + L +K+
Sbjct: 561 KVDVDFSEAHFSYQGVLRLPFVNNSHLQSACQKL 594
>gi|399949668|gb|AFP65326.1| dhm exonuclease [Chroomonas mesostigmatica CCMP1168]
Length = 549
Score = 185 bits (469), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/299 (39%), Positives = 170/299 (56%), Gaps = 35/299 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKS-DSQVFDSNVITPGTEFMAV 59
MNQQRSRRFR+ K+ E+ +L QE + +P ++ + + FDSN ITPGT FM
Sbjct: 90 MNQQRSRRFRSVKEL-----EKTKLTQE-----KNVPLENFEKKYFDSNCITPGTTFMKR 139
Query: 60 LSIALQYYIHLRLNNDPGWEK-IKVILSDANVPGEGEHKIMSYVR-LQRNLPGYDPNTRH 117
LS + + ++ ++ NDP W++ +I S + VPGEGEHKIM+Y+R +Q++ + RH
Sbjct: 140 LSQSFKKWLAKKIRNDPEWQQGCDIIFSGSEVPGEGEHKIMNYIRKIQKSKSRKITSLRH 199
Query: 118 CLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGE 177
CLYGLDADLIML L HE F++LRE K G P ++N ++
Sbjct: 200 CLYGLDADLIMLGLVAHENQFTLLRE---------KLIWKGTP---SSNKSVDFFKRKDN 247
Query: 178 FDEKGDEVVVPKKPYQFLHIWTLREYLDYEFR-IPNPPFEIDLECIVDDFIFMCFFVGND 236
F GDE + L I LR+ L EF+ F+ ++E IVDDFIF+C +GND
Sbjct: 248 F--AGDE-------FHLLEISLLRDMLYLEFKPKERCEFDYNIERIVDDFIFICMLIGND 298
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 295
FLP +P L+I G +NLL+ Y++ GYLT + + RVE F++ + + + F
Sbjct: 299 FLPSLPHLDIASGGLNLLVRSYQEIQLKTKGYLTSKHRMHIGRVELFLEKISNEAEEFF 357
Score = 148 bits (373), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 105/177 (59%), Gaps = 3/177 (1%)
Query: 435 GWKERYYEEKFNAKT-PEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPF 493
+K+ YY K +E ++ ++ Y GL W ++YY+ G SW W+YP +Y P
Sbjct: 372 NYKKDYYSTKLMFDIFSKESDKFLSILITNYIHGLNWCLYYYHLGCPSWNWYYPEYYTPL 431
Query: 494 ASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTD 553
ASDLK+L + I+F G PF+P QLL V P SS LP+ + LM NSPI +FYP +
Sbjct: 432 ASDLKNLYKIKINFTKGRPFEPLMQLLSVLPPNSSSFLPKSFENLMIQKNSPILNFYPLN 491
Query: 554 FEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKI--EHTLTEEEARRNSIMADMLFVL 608
+++D+NGK+ W+GI LPFID+ +L D VK+ + E+E RN D++F L
Sbjct: 492 YKIDLNGKKNLWEGIVVLPFIDQKKLSDAVKRYGKKQNFNEDEKIRNCFGKDVIFFL 548
>gi|238609845|ref|XP_002397575.1| hypothetical protein MPER_01971 [Moniliophthora perniciosa FA553]
gi|215472342|gb|EEB98505.1| hypothetical protein MPER_01971 [Moniliophthora perniciosa FA553]
Length = 150
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 81/146 (55%), Positives = 111/146 (76%), Gaps = 2/146 (1%)
Query: 439 RYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLK 498
RYY++KF + ++ E RK + Y EG+ WV+ YYY+G SWQW+YPYH+APFA+D +
Sbjct: 1 RYYQQKFGVEYTDK--EFRKKLTQSYVEGMSWVLCYYYQGTPSWQWYYPYHFAPFAADFE 58
Query: 499 DLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDM 558
++D+ NI FE+G PFKP+ QL+GVFP+AS +P+ + LMT+ SPI DFYP+ F+VDM
Sbjct: 59 EVDEMNIHFEIGQPFKPYEQLMGVFPAASRKHIPDPFHHLMTEEESPIIDFYPSTFQVDM 118
Query: 559 NGKRYSWQGIAKLPFIDEARLLDEVK 584
NGK+ +WQGIA LPFIDE RLLD ++
Sbjct: 119 NGKKMAWQGIALLPFIDEKRLLDSMR 144
>gi|71665066|ref|XP_819507.1| 5'-3' exonuclease XRND [Trypanosoma cruzi strain CL Brener]
gi|70884811|gb|EAN97656.1| 5'-3' exonuclease XRND, putative [Trypanosoma cruzi]
Length = 807
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 114/318 (35%), Positives = 165/318 (51%), Gaps = 50/318 (15%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+++ +S + ++ ++G LP +D NVITP T FM +
Sbjct: 109 MNQQRSRRFRAAEERIESEVFSAQCAEDVVKKGLPLPQTRSR--WDHNVITPSTPFMERV 166
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+A++++I ++N DP W I VI SDA+VPGEGEHKIM Y+R R GY+P T H ++
Sbjct: 167 GLAIEWFIMKKINEDPAWRHIAVIFSDAHVPGEGEHKIMHYIRELRAQLGYNPQTSHVIH 226
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G+DADLI L L+THE H +ILR + Q D C
Sbjct: 227 GMDADLICLGLSTHEEHVTILRNQLTETFQPDHNRFC----------------------- 263
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
Y L+ + LR D+ ++D E ++DDFIF+CFFVGNDFLPH
Sbjct: 264 -----------YFSLYKYRLRLRDDF-----GGIGQMDFERVLDDFIFLCFFVGNDFLPH 307
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQ--AVGSYEDR----- 293
+P + I+ I LL+ Y + F+ YLT G + + + F++ VG E
Sbjct: 308 VPLISIKTKGIELLLDHYVRGFKD-HSYLTHGGEVNYGNLAKFLRFFLVGYMEKLKQEYG 366
Query: 294 -IFQKRARLHQRHAERIK 310
+ + + R + ER+K
Sbjct: 367 GVLRAKQRAKAKVEERVK 384
Score = 113 bits (283), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 82/154 (53%), Gaps = 5/154 (3%)
Query: 437 KERYYEEKFNAKTPEEREETRKDVVL---RYTEGLCWVMHYYYEGVCSWQWFYPYHYAPF 493
+++YYE+KF P +RE K + L Y G WVM YY G SW W+YP++YAP
Sbjct: 442 RDKYYEKKFGWD-PADREAFEKKIQLCCAEYLRGTQWVMRYYTTGCPSWDWYYPFYYAPL 500
Query: 494 ASDLKDL-DQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPT 552
DL + + LG P P QLL V P S ALPE + DP S + FYP
Sbjct: 501 LQDLAHFPGKVKVKMTLGAPRHPVLQLLAVLPRLSVEALPEELHDAVKDPESVLGVFYPE 560
Query: 553 DFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKI 586
+VD + +S+QG+ +LPF++ + L +K+
Sbjct: 561 KVDVDFSEAHFSYQGVLRLPFVNNSHLQSACQKL 594
>gi|145507550|ref|XP_001439730.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406925|emb|CAK72333.1| unnamed protein product [Paramecium tetraurelia]
Length = 394
Score = 184 bits (466), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/280 (35%), Positives = 147/280 (52%), Gaps = 28/280 (10%)
Query: 401 KEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDV 460
K K KL E+ + + D S ++ K +K+RYY+EKF K P + E + +
Sbjct: 61 KSALKDKLTEINQQEIDQAQSAKSSQELKKWKSVSYKQRYYQEKFGIK-PTQFSEFQHRI 119
Query: 461 VLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLL 520
+ Y E L W + YYY+G W WFYPYHYAPFA DL +LDQ F L PFKP+ QLL
Sbjct: 120 KISYLEALAWTLKYYYQGCVDWGWFYPYHYAPFAQDLTNLDQCMFEFSLNTPFKPYQQLL 179
Query: 521 GVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLL 580
V P S+ LP Y++LM + +S I+DFYPTDF VD+ GK+++W G LPF+D RL+
Sbjct: 180 AVLPPQSAQFLPRPYQQLMLESSSSIADFYPTDFVVDLKGKKFAWLGEVVLPFVDADRLI 239
Query: 581 DEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLN 640
I L++ E R+ + ++F L H + + +Q I+ +V+ R
Sbjct: 240 S-ASNIGVNLSKLEQERDRLGQTLIFSLKKHEIF--------NFQQCHIQAQVDWLPRF- 289
Query: 641 PELSDGMNGYISPCAGDPHPPVFRSPVASMEDIMGNQVLC 680
P +SP+ +M +I+ NQ++C
Sbjct: 290 -----------------PVGSEIKSPIPTMGNILNNQIIC 312
>gi|170119902|ref|XP_001891045.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164633808|gb|EDQ98306.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 345
Score = 182 bits (463), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 111/300 (37%), Positives = 155/300 (51%), Gaps = 53/300 (17%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR +K+A + +R++ E +G KLP + + FDSN I P
Sbjct: 85 MNQQRSRRFRTAKEA-------KVVREKAELKGEKLPME---KAFDSNCIAPVNTIYGTF 134
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+IH +++ D W ++KV+LS VPGEGEHKIM Y+RL R PGY+PN RHCLY
Sbjct: 135 IDQLRYFIHKKISEDSNWREVKVVLSGREVPGEGEHKIMEYIRLSRAQPGYNPNIRHCLY 194
Query: 121 GLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADLIML L +H+ H +LRE V F P + K
Sbjct: 195 GLDADLIMLGLLSHDPHLCLLREEVKFGPASRKKW------------------------- 229
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNP--PFEIDLECIVDDFIFMCFFVGNDF 237
+ + LH+ +REYLD EF PF+ +L+ ++DDF
Sbjct: 230 ----NTSLESVNFYLLHLSLMREYLDLEFHEIQLMLPFDYNLKRVIDDF----------- 274
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
LP +P L I E + L VYKK L GY +G + +R++ + + +E +F+K
Sbjct: 275 LPDLPDLHIHENGLEKLFDVYKKVLPGLDGYTNEGGVINTKRLQVILDEMTPWEQGVFEK 334
>gi|342182115|emb|CCC91594.1| putative exoribonuclease 1 [Trypanosoma congolense IL3000]
Length = 1296
Score = 182 bits (462), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 128/320 (40%), Positives = 179/320 (55%), Gaps = 37/320 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RR+R S E R+ EG +L + VFDSN ITPGTEFM +
Sbjct: 94 MNQQRQRRYR-------SGYEMMVARERAAAEGMEL---LEENVFDSNCITPGTEFMVNV 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S L+Y+I +++++DP W+ KV+ S + PGEGEHKI+ Y+R ++ Y+PN H LY
Sbjct: 144 SEHLKYFIMMKVSSDPAWQSCKVVYSGHDHPGEGEHKIVDYIRRRKMQEDYNPNETHSLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVV-FTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADLI+LALATHE H +LREVV F P Q +A R+ E D
Sbjct: 204 GLDADLILLALATHEPHLVLLREVVSFGPSQGS-----------------RADREQREND 246
Query: 180 EKGDEVVVPK---KPYQFL--HIWTLREYLDYEFRIP---NPPFEIDLECIVDDFIFMCF 231
E + +V K KP +F+ H+ LR YLD E R P DLE ++DDF+FMC
Sbjct: 247 E-ANGIVADKTYNKPDEFVLFHVNILRNYLDLEVRYVLGGKLPAGYDLEHVIDDFVFMCI 305
Query: 232 FVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYE 291
F+GNDFLP +PTL IR+G++ ++ +Y + G LT+ + V+ ++Q + E
Sbjct: 306 FIGNDFLPSIPTLGIRDGSVVKMVEIYATKIVKNGRRLTEDGSINWDAVDTWLQELAKDE 365
Query: 292 DRIFQKRARLHQRHAERIKR 311
+ RA + + R+ R
Sbjct: 366 LPTIKSRALQERAYQSRMAR 385
Score = 136 bits (342), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 99/176 (56%), Gaps = 7/176 (3%)
Query: 436 WKERYYEEKF---NAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAP 492
+KE+YY EK + P+ E + L Y EG+ WV+ YYY+G SW+WFYP+HYAP
Sbjct: 406 YKEKYYREKHGFGDGWNPQG--ENMAKLKLHYVEGIAWVLEYYYQGPPSWKWFYPHHYAP 463
Query: 493 FASDLKDLDQF--NISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFY 550
ASDL DL + F+ G PF P QLL V P S +P Y L+ SP++ ++
Sbjct: 464 MASDLVDLAAVASRVRFDPGEPFLPHQQLLAVLPPMSYRLVPRAYWPLLRSKGSPLAKYF 523
Query: 551 PTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 606
P ++D G R W+G+ +PFIDE LL + ++ +T E+ + NS +LF
Sbjct: 524 PEKLQIDREGARAEWEGVVLIPFIDERVLLAAYESVQSKVTPEDRKNNSPGPPILF 579
>gi|407849157|gb|EKG03993.1| 5'-3' exonuclease XRNA, putative [Trypanosoma cruzi]
Length = 383
Score = 182 bits (461), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/293 (37%), Positives = 156/293 (53%), Gaps = 44/293 (15%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA+++ +S + +E ++G LP +D NVITP T FM +
Sbjct: 109 MNQQRSRRFRAAEERIESEVFSAQCAEEVVKKGLPLPQTRSR--WDHNVITPSTPFMERV 166
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+A++++I ++N DP W I VI SDA+VPGEGEHKIM Y+R R GY+P T H ++
Sbjct: 167 GLAIEWFIMKKINEDPAWRHIAVIFSDAHVPGEGEHKIMHYIRELRAQLGYNPQTSHVIH 226
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G+DADLI L L+THE H +ILR + Q D C
Sbjct: 227 GMDADLICLGLSTHEEHVTILRNQLTETFQPDHNRFC----------------------- 263
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
Y L+ + LR D+ ++D E ++DDFIF+CFFVGNDFLPH
Sbjct: 264 -----------YFSLYKYRLRLRDDF-----GGIGQMDFERVLDDFIFLCFFVGNDFLPH 307
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQ--AVGSYE 291
+P + I+ I LL+ Y + F+ YLT G + + + F++ VG E
Sbjct: 308 VPLISIKTKGIELLLDHYVRGFKD-HSYLTHGGEVNYGNLTKFLRFFVVGYME 359
>gi|162606084|ref|XP_001713557.1| very similar to mouse Dhm1 and Dhm2 [Guillardia theta]
gi|13794477|gb|AAK39852.1|AF165818_60 very similar to mouse Dhm1 and Dhm2 [Guillardia theta]
Length = 542
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 120/302 (39%), Positives = 160/302 (52%), Gaps = 48/302 (15%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFRA KD + + R R DSN ITPGT FMA L
Sbjct: 90 MNQQRSRRFRAIKDNEKKSDFDHRNRLNL--------------TLDSNCITPGTSFMAEL 135
Query: 61 SIALQYYIHLRLNNDPGWEK-IKVILSDANVPGEGEHKIMSYVRLQRNLPGY-DPNTRHC 118
S A + ++ ++ D W+ +I S A VPGEGEHKIM+++R +NL D HC
Sbjct: 136 SYAFKIWLEKKIKTDIEWQTGCDIIFSGAEVPGEGEHKIMNFIRKLKNLKNNPDLILSHC 195
Query: 119 LYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAG-- 176
LYGLDADLIML L +HE +F++LRE LA +G + K G
Sbjct: 196 LYGLDADLIMLGLVSHEKNFTLLRE------------------KLAW--KGTSNVKEGYN 235
Query: 177 -EFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEID--LECIVDDFIFMCFFV 233
EF++ P + L I LRE L EFR P + D +E IVDDF+FMC +
Sbjct: 236 YEFEKS------PSDDFHLLEISLLREMLYLEFR-PREFLDQDYNMERIVDDFVFMCMLI 288
Query: 234 GNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDR 293
GNDFLP +P L+I G +NLL+ YK+ + + GYLT+ SK + R E F + + +
Sbjct: 289 GNDFLPGIPHLDIGYGGLNLLVRSYKEIQKHIHGYLTNKSKIHVGRAELFFEKLSVESEE 348
Query: 294 IF 295
++
Sbjct: 349 LY 350
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 108/179 (60%), Gaps = 5/179 (2%)
Query: 431 LGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHY 490
L +K YY +K N +E D++ Y EGL W ++YY++G SW WFYP +Y
Sbjct: 362 LCSNDYKMEYYVKKLNCSVSNNKERIN-DLIQTYIEGLHWCLYYYHKGCPSWNWFYPEYY 420
Query: 491 APFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFY 550
AP ASDLK L + I F+ G PF+P QLL V P S + LP + +LM +SP+ D+Y
Sbjct: 421 APLASDLKSLKKIKIKFKKGKPFEPLVQLLAVLPPNSRNLLPISFSRLMVKKDSPVIDYY 480
Query: 551 PTDFEVDMNGKRYSWQGIAKLPFIDEARL---LDEVKKIEHTLTEEEARRNSIMADMLF 606
P ++++DMNGK+ W+G+ LPFI+E+ L LD +K TL +EE RNS D+ F
Sbjct: 481 PLEYKIDMNGKKNLWEGVVILPFINESNLVLTLDNMKT-RSTLNDEENTRNSFGKDVTF 538
>gi|70946141|ref|XP_742816.1| exoribonuclease [Plasmodium chabaudi chabaudi]
gi|56522004|emb|CAH76803.1| exoribonuclease, putative [Plasmodium chabaudi chabaudi]
Length = 742
Score = 181 bits (459), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 101/249 (40%), Positives = 152/249 (61%), Gaps = 11/249 (4%)
Query: 403 EFKAKLKELLRDKSDAFNSDNPEEDKVKLG---EPG-WKERYYEEKFNAKTPEEREETRK 458
EF LKE ++ ++ +NP+ED V+LG +P + RYY KF+ + +E K
Sbjct: 123 EFNLLLKEAIKKANEC---ENPKED-VELGADDDPNDLRARYYRSKFHLDETDNVDEFVK 178
Query: 459 DVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQ 518
+VV +Y EGL WV+ YY++ W W+YPY+YAP +SDL + +ISFE P PF Q
Sbjct: 179 EVVYKYIEGLAWVLCYYFQACPMWHWYYPYYYAPLSSDLL-IKDISISFEEDEPLLPFEQ 237
Query: 519 LLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEAR 578
LL V PS SSH LP+ YR+LM SPI DFYP F+ + NGK++ +Q I LPF+++ R
Sbjct: 238 LLCVLPSNSSHCLPKMYRELMLKNESPIVDFYPKTFKEEENGKKFKYQWIVLLPFVEKER 297
Query: 579 LLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYT-LDEHCKQLKIKER-VEVK 636
++ + ++ TLT+EE +RN + +++ +H LS I T + + K++K KE+ VE
Sbjct: 298 IIRFARDLDDTLTDEEKKRNRRGLNKIYMSSTHILSKKITTSMRTYIKEIKDKEKNVEEI 357
Query: 637 ERLNPELSD 645
E N E ++
Sbjct: 358 ENHNAETNE 366
>gi|330040606|ref|XP_003239969.1| dhm exonuclease [Cryptomonas paramecium]
gi|327206895|gb|AEA39071.1| dhm exonuclease [Cryptomonas paramecium]
Length = 541
Score = 180 bits (457), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 115/304 (37%), Positives = 164/304 (53%), Gaps = 40/304 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR +E ++Q K S+ +VFDSN ITPGTEFM L
Sbjct: 88 MNQQRSRRFRT---------KETNMKQN------KNFTHSNEEVFDSNCITPGTEFMKRL 132
Query: 61 SIALQYYIHLRLNNDPGWEK-IKVILSDANVPGEGEHKIMSYVR-LQRNLPGYDPNT-RH 117
S + ++ ++ D W++ VI S + VPGEGEHKIM+Y+R +Q+ Y +T +H
Sbjct: 133 SFFFKKWLKNKVKFDSEWKQGCDVIFSSSEVPGEGEHKIMNYIRKIQKVYFQYKKSTLKH 192
Query: 118 CLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGE 177
CLYGLDADLIML L +HE +F++LRE +F G N E +
Sbjct: 193 CLYGLDADLIMLGLLSHEKNFTLLREKIFHRGTT------------TFNKETCLDKNLN- 239
Query: 178 FDEKGDEVVVPKKPYQFLHIWTLREYLDYEFR-IPNPPFEIDLECIVDDFIFMCFFVGND 236
++ + + L I LR+ + EF+ F+ D+E I+DDFIFMC +GND
Sbjct: 240 --------LLMSEEFHLLEISLLRDMIFLEFKPKKTILFKYDVERIIDDFIFMCMLLGND 291
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
F+P +P L I +G +NLL+ YK+ + L GYLT + R E F + + S + +F
Sbjct: 292 FIPGLPHLNITQGGLNLLVRSYKEIQQKLDGYLTKKHQIHFGRAELFFRKISSEAESLFF 351
Query: 297 KRAR 300
R +
Sbjct: 352 FRRK 355
Score = 142 bits (358), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 101/180 (56%), Gaps = 3/180 (1%)
Query: 430 KLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYH 489
K G +K YY KF T + +++ Y GL W + YY++ SW WFYP +
Sbjct: 358 KTGNETYKSSYYLSKFKF-TYQIEHGFLSNLIKNYIHGLHWCLFYYHKKCPSWNWFYPEY 416
Query: 490 YAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDF 549
Y+P SDL +L F I F G PF P QLL V P SS LP + LM + SP+ F
Sbjct: 417 YSPLCSDLVNLCPFEIFFTKGRPFSPLIQLLAVLPPRSSVFLPSSFANLMLNEKSPVKCF 476
Query: 550 YPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKI--EHTLTEEEARRNSIMADMLFV 607
YP ++++D+NGK+ W+GI LPFIDE +LLD +K + L+ +E RNS D++F
Sbjct: 477 YPYEYKIDLNGKKNVWEGIVLLPFIDENKLLDAIKMFIKKEQLSIQEKERNSFARDIVFT 536
>gi|385303535|gb|EIF47601.1| 5 -3 exoribonuclease 1 [Dekkera bruxellensis AWRI1499]
Length = 646
Score = 178 bits (452), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/224 (39%), Positives = 131/224 (58%), Gaps = 5/224 (2%)
Query: 383 GAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYE 442
G + E++ F+ ++ +FK + ++ D + +K L WK +YY+
Sbjct: 55 GISAXESDEEFKQRAEDIHSQFKRYQRSIVVDSEKTLTEEKDLYNKKFLD---WKNQYYK 111
Query: 443 EKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQ 502
EK + +E + T D+ Y EGL WV++YYY+GVCSW W+Y YHYAP SD+
Sbjct: 112 EKLHFTLDDEDKIT--DLTENYVEGLQWVLNYYYKGVCSWPWYYHYHYAPRISDVSRGLG 169
Query: 503 FNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKR 562
++F++G PFKPF QL+GV P+ S LP Y++LMTD SPI DFYP D E DMNGK
Sbjct: 170 VKLNFKMGQPFKPFQQLMGVLPARSRRLLPACYQELMTDAKSPIIDFYPNDCETDMNGKT 229
Query: 563 YSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 606
W+ + L F+DE RL+ + ++ LT EE +RN+ ++LF
Sbjct: 230 APWEAVVLLSFVDEKRLIKVMTPLDKYLTPEEKQRNTFGRNLLF 273
>gi|326435791|gb|EGD81361.1| hypothetical protein PTSG_11834 [Salpingoeca sp. ATCC 50818]
Length = 1592
Score = 177 bits (450), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 117/192 (60%), Gaps = 12/192 (6%)
Query: 435 GWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA 494
G+KE YY +KF ++ +D+ YTEG+CWVM YY++G SW W+Y YHYAPF
Sbjct: 1218 GFKEMYYRKKF--ESAASGATFLRDLATAYTEGVCWVMLYYFQGCPSWSWYYKYHYAPFC 1275
Query: 495 SDLKDLDQFNISFEL---GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYP 551
SD LD +S PF+P QL+GVFP ASS LP + KLMT S +S FYP
Sbjct: 1276 SDFAALDMDTVSLPFPDDSTPFRPLEQLMGVFPPASSSFLPARWAKLMTG-KSAVSRFYP 1334
Query: 552 TDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSH 611
+ F VD+NGK+Y+WQG+ LPF+DE LL + ++ +LT EEA RN+ D+LF
Sbjct: 1335 SSFRVDLNGKKYAWQGVTLLPFMDEDVLLTALDRVYPSLTGEEAHRNAFGHDLLF----- 1389
Query: 612 PLSASIYTLDEH 623
LS S L +H
Sbjct: 1390 -LSKSSQALQDH 1400
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/175 (52%), Positives = 117/175 (66%), Gaps = 9/175 (5%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQV------FDSNVITPGT 54
MNQQR+RRFR++++A D E+ + E +G + PK QV FDSN ITPGT
Sbjct: 383 MNQQRARRFRSAQEAEDRKRVIEKRVEALEADG--VAPKYYYQVTKKKMSFDSNCITPGT 440
Query: 55 EFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPN 114
FMA L+ L+ YI RL+++ W+ ++VILSDA+VPGEGEHKIM ++R Q++LP YDPN
Sbjct: 441 PFMARLAQRLREYIDDRLHSNAAWKDVQVILSDASVPGEGEHKIMDFIRQQQSLPSYDPN 500
Query: 115 TRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEG 169
RH LYG DADLIML LATHE HF I+RE F P + C +CG GH C G
Sbjct: 501 MRHVLYGADADLIMLGLATHEPHFYIIRE-EFVPPPKKPCPICGFRGHALNECTG 554
Score = 80.9 bits (198), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 52/77 (67%)
Query: 222 IVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVE 281
+VDD++ +C VGNDFLPH+P+L I EGAI+ L +Y R+LGG+L D +L R+
Sbjct: 802 MVDDWVLLCCLVGNDFLPHLPSLSIHEGAIDTLTRLYATMQRSLGGFLHDNGHVNLPRLG 861
Query: 282 HFIQAVGSYEDRIFQKR 298
F+ +G+ ED + ++R
Sbjct: 862 MFLARLGTMEDHVIRQR 878
>gi|154317860|ref|XP_001558249.1| hypothetical protein BC1G_02913 [Botryotinia fuckeliana B05.10]
Length = 945
Score = 177 bits (450), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 80/172 (46%), Positives = 108/172 (62%), Gaps = 2/172 (1%)
Query: 436 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 495
WK++YYE KF E E T+ + Y +GL WV++YYY GV SW W+Y YHY+P S
Sbjct: 62 WKDKYYEGKFEWDRKNEIELTK--LCENYVQGLQWVLYYYYRGVVSWPWYYQYHYSPMIS 119
Query: 496 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 555
D+ + +++F+LG PF PF QL+GV P S +P Y LMT+P SPI DFYP DFE
Sbjct: 120 DVIKGLKADVNFKLGQPFHPFEQLMGVLPDRSKKIVPTVYHDLMTNPASPIIDFYPRDFE 179
Query: 556 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
+DMNGK+ W+ + K+PFIDE RLLD + + L++ E RN + F
Sbjct: 180 LDMNGKKMEWEAVVKIPFIDEKRLLDAMATKNNLLSDAEKFRNEFGVSLKFT 231
>gi|348581618|ref|XP_003476574.1| PREDICTED: 5'-3' exoribonuclease 1-like [Cavia porcellus]
Length = 1639
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 77/163 (47%), Positives = 106/163 (65%), Gaps = 2/163 (1%)
Query: 436 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 495
+K YY K + + D + Y + + W++HYYY GV SW WFYPYHYAPF S
Sbjct: 342 YKRTYYMTKMGVDVVSD--DFLADQAVCYVQAIQWILHYYYHGVQSWSWFYPYHYAPFLS 399
Query: 496 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 555
D++++ I FELG PFKPF QLL V P+AS + LP Y+ LMT +SPI ++YP DF+
Sbjct: 400 DIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPVCYQHLMTSEDSPIIEYYPPDFK 459
Query: 556 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
D+NGK+ W+ + +PFIDE RLL+ ++ H+L EEE +RN
Sbjct: 460 TDLNGKQQEWEAVVLIPFIDEKRLLEAMEACNHSLKEEERKRN 502
Score = 155 bits (393), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 86/194 (44%), Positives = 120/194 (61%), Gaps = 17/194 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAVEK-GETLPTEAR---FDSNCITPGTEFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ +DPNTRHCLY
Sbjct: 144 HEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKQDHDPNTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD- 179
GLDADLIML L +HE HFS+LRE V G++ HL K+ K EFD
Sbjct: 204 GLDADLIMLGLTSHEAHFSLLREEVRFGGKKT------HSAHLNLTRYEKSIVKRSEFDR 257
Query: 180 EKGDEVVVPKKPYQ 193
E EV V K ++
Sbjct: 258 EHFSEVFVDLKWFE 271
>gi|123477106|ref|XP_001321722.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
gi|121904554|gb|EAY09499.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
Length = 702
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 111/297 (37%), Positives = 153/297 (51%), Gaps = 31/297 (10%)
Query: 1 MNQQRSRRFRASKDAA-DSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAV 59
MNQQR RRF A+KD+ + + + L E + P++ Q D+N ITPGTEFM
Sbjct: 106 MNQQRIRRFCAAKDSEYNRYMQCQDLSITKEEIDEIMDPQTIIQS-DTNTITPGTEFMMQ 164
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
LS + I+ + P W I VI SDA+VPGEGEHKIM ++R QR YD + HC+
Sbjct: 165 LSDYITEMINRKQKTSPAWSNIAVIFSDASVPGEGEHKIMEFIRSQRVEFNYDFSRHHCV 224
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
YGLDAD + L L+ HE+ F+ILRE VF N E AG F
Sbjct: 225 YGLDADFLFLGLSCHELFFTILREEVF-------------------NVENLTP-PAGRFG 264
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
P K + F + + R+YL+ + + F+ E +DD IF+C GNDFLP
Sbjct: 265 --------PAK-FLFANGFVFRQYLERDLKPAKMGFDWYFERALDDIIFLCVTAGNDFLP 315
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
+P + I G+I + +YKK LGGY+TD +R F+ ++ E+ Q
Sbjct: 316 QIPGMNILGGSIGKIFELYKKILPELGGYITDNGNVDCKRAAKFLHSLVDSEEIALQ 372
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 95/174 (54%), Gaps = 6/174 (3%)
Query: 437 KERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASD 496
++RYY+EK E+ E KDV + Y +G+ W + YY G SW W+YPY+YAP S
Sbjct: 423 QQRYYKEKHGFD--EKDVEKVKDVCINYLKGMAWTLQYYLHGCTSWSWYYPYYYAPLLSS 480
Query: 497 LKDLDQFNISFEL---GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTD 553
+ L+ +I+ + P P QL+ V P SSH LP++ +LM SP+ +YPT
Sbjct: 481 FELLENLDINLSVLDDSKPIPPLEQLMSVLPPQSSHLLPQNMAELMKK-GSPLEKYYPTT 539
Query: 554 FEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
F +DM G W+GI +P ID L +K + LT+EE +RN +FV
Sbjct: 540 FSIDMMGGHQPWKGITFIPIIDGEFLEKTLKDSKIILTDEEEKRNKTGFVKVFV 593
>gi|315049287|ref|XP_003174018.1| hypothetical protein MGYG_04190 [Arthroderma gypseum CBS 118893]
gi|311341985|gb|EFR01188.1| hypothetical protein MGYG_04190 [Arthroderma gypseum CBS 118893]
Length = 1424
Score = 176 bits (447), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 106/172 (61%), Gaps = 2/172 (1%)
Query: 436 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 495
WK++YY+ KF E EE RK + Y +GL WV+ YYY GV SW WFY YHYAP S
Sbjct: 509 WKDKYYKGKFGWGL-ENAEEMRK-LTENYVQGLQWVLFYYYRGVASWPWFYRYHYAPMIS 566
Query: 496 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 555
D+ ++ F+LG PF PF QL+GV P S +P + LMT P SPI DFYP DFE
Sbjct: 567 DIHLGLGADVDFKLGQPFFPFQQLMGVLPDRSKKIVPVAFHSLMTTPESPIIDFYPRDFE 626
Query: 556 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
+DMNGK+ W+ + K+PFI+E RLL + EH LT +E RNS + F
Sbjct: 627 LDMNGKKMEWEAVVKIPFIEEERLLKAMATKEHLLTPDEKARNSFGVTLKFT 678
>gi|328865598|gb|EGG13984.1| 5'-3' exoribonuclease [Dictyostelium fasciculatum]
Length = 1808
Score = 176 bits (446), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 119/294 (40%), Positives = 163/294 (55%), Gaps = 49/294 (16%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
+NQQR RRF S EE+ ++E +EG++LP +F N ITPGTEFM+ L
Sbjct: 292 LNQQRQRRFL-------SVFREEKEKKELIKEGKELP----EVIFSRNAITPGTEFMSNL 340
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S LQ++I +++ D W +I++I S PGEGEHKI+ Y+R + P +DPN HCLY
Sbjct: 341 SECLQFFIKKKISEDLSWREIEIIFSGPENPGEGEHKIIDYIRKYKASPDWDPNQSHCLY 400
Query: 121 GLDADLIMLALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADLI+LAL THE HFSILR E+ F P Q +K
Sbjct: 401 GLDADLILLALVTHEPHFSILREEIAFRP-QANK-------------------------- 433
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
+ +Q LHI LREY++ E + F LE I+DDF+ + F GNDFLP
Sbjct: 434 ---------QLDFQLLHISLLREYMELELKC-ELDFGYSLERIIDDFVLVMIFFGNDFLP 483
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDR 293
H+P EI G +N ++ +YK LGGYLTD ++ L R+ F+ + +E +
Sbjct: 484 HLPFCEISTGGLNSVLELYKNSLNELGGYLTDEAEIDLDRLAVFLAKIAVFERK 537
Score = 139 bits (350), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 92/229 (40%), Positives = 129/229 (56%), Gaps = 13/229 (5%)
Query: 381 TIGAA----IVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGW 436
T+G A +VE + E D Q+++E+ + + + R K + F E+D V+ W
Sbjct: 541 TVGEAEENEVVE-DMLLENDVQDDEEKKEIERRAFERLK-NHFGEITFEDDDVEDINDYW 598
Query: 437 KERYYEEKFNAKTPEEREETRKD----VVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAP 492
YY KF PEE D +VL+Y EGL WV++YY+ G SW+W+YPY+YAP
Sbjct: 599 INGYYRSKF-PDFPEENRSAIVDYKRHLVLKYVEGLSWVLNYYHNGCISWRWYYPYYYAP 657
Query: 493 FASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPT 552
A D++DL I FE P PF QL+ V P S+H LP Y++LMT SPI DFYPT
Sbjct: 658 LAVDMRDLSSLEIEFESNGPVTPFQQLMSVLPPQSAHLLPAPYQELMTSAASPIIDFYPT 717
Query: 553 DFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEH-TLTEEEARRNSI 600
+FEVD + Y + GIA + F D RLL+ + LT++E RN++
Sbjct: 718 EFEVDTSDSHY-FDGIAVIGFPDLGRLLEATAAEDSWDLTDKERSRNAL 765
>gi|300121215|emb|CBK21596.2| unnamed protein product [Blastocystis hominis]
Length = 938
Score = 176 bits (445), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 107/306 (34%), Positives = 161/306 (52%), Gaps = 48/306 (15%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
+NQQRSRR+R + D E E G K +VFDSN ITPGTEFM +
Sbjct: 94 LNQQRSRRYRTALDRC----------LEVESTGHK------GEVFDSNCITPGTEFMHKV 137
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
++Y+I +++ DP W V+ S + PGEGEHKIM+++R P Y+ RHC+Y
Sbjct: 138 DQLIEYFIRKKISEDPLWRNTMVLYSSHSDPGEGEHKIMNFIRYLCTSPDYNAAERHCIY 197
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAK-RKAGEFD 179
GLDADLI+L+L+ H+V+ +LR ++ + +A RK
Sbjct: 198 GLDADLILLSLSLHDVNVILLRNII----------------------DFRAYFRKVQTTV 235
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEI--DLECIVDDFIFMCFFVGNDF 237
+ + P ++ HI LREYL + + N + D E ++DDF+F+ +GNDF
Sbjct: 236 NRAE----PIHKWEIFHISVLREYLFRDLQPSNASWMSVKDRERLIDDFVFIMILLGNDF 291
Query: 238 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
LP +P+L+I G+I L+A+YK+ +L D +KPSL + F Q + E+ +
Sbjct: 292 LPELPSLDIVNGSIQDLIAIYKEVCLDRHKFLVDDAKPSLSLLRQFFQRLSETEEVMI-- 349
Query: 298 RARLHQ 303
A LH+
Sbjct: 350 -ALLHE 354
Score = 140 bits (353), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 73/157 (46%), Positives = 89/157 (56%), Gaps = 3/157 (1%)
Query: 452 EREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGH 511
E E DV Y EGL WV+ YYY GV SW WFY YHYAP SDL D SF LG
Sbjct: 426 ENEVILDDVCRNYYEGLYWVLLYYYRGVRSWTWFYRYHYAPLPSDLARCDMKYSSFSLGA 485
Query: 512 PFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKL 571
P KPF Q L P S LP YR L++ SP++DFYP F +DMN K+ W+G+ +
Sbjct: 486 PVKPFLQQLSCLPPQSQSILPASYRVLVS-AKSPVADFYPARFSIDMNNKKNPWEGVNLI 544
Query: 572 PFIDEARLLD--EVKKIEHTLTEEEARRNSIMADMLF 606
PFID RL E +++ LT +E +RN+ LF
Sbjct: 545 PFIDIDRLTAAMEALQVDAGLTLDEQKRNAFQGPQLF 581
>gi|339237353|ref|XP_003380231.1| 5'-3' exoribonuclease 1 [Trichinella spiralis]
gi|316976968|gb|EFV60153.1| 5'-3' exoribonuclease 1 [Trichinella spiralis]
Length = 614
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/287 (37%), Positives = 152/287 (52%), Gaps = 40/287 (13%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRF ++K+A DS R + R G +P DS FDSN ITPGTEFM L
Sbjct: 82 MNQQRSRRFMSAKEAEDS-------RLKAIRNGEVIP---DSDPFDSNCITPGTEFMERL 131
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
I L+Y+I+L+L++DP W+ + V S + PGEGEHKI++++R R+ YD NT HC+Y
Sbjct: 132 HIHLKYFINLKLSSDPLWQNVDVYYSGHDCPGEGEHKILAFIRFMRSQADYDSNTTHCIY 191
Query: 121 GLDADLIMLALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
GLDADLI L +A HE +FSILR EVV+ + + C + A +
Sbjct: 192 GLDADLIFLGMAMHEPYFSILREEVVYDSRSKKRYIKCDDDDDNNNLLRFAYGQFA--YG 249
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 239
+ ++V P D E I+DD+IFM FF+GNDF+P
Sbjct: 250 RRSEQV---------------------------KPDVYDEEKIIDDWIFMSFFIGNDFIP 282
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQA 286
++P L E A+ + Y+ F + SK + R HF+ +
Sbjct: 283 NVPMLITNENALPNVWLAYQNAFPNMDACGWLESKRAQRVRFHFLSS 329
Score = 130 bits (327), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 63/114 (55%), Positives = 75/114 (65%)
Query: 485 FYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNS 544
FY +HYAPF SDL D + I+FELG PF PF QLL V P +S LPE Y+ LM +P+S
Sbjct: 452 FYGFHYAPFVSDLCDFNVGEITFELGEPFLPFQQLLAVLPPSSRKLLPEPYQDLMVNPDS 511
Query: 545 PISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
P+S YP D E DMNGK+Y W+ I KLPFIDE L D V L ++E RRN
Sbjct: 512 PLSYAYPEDVERDMNGKKYEWECILKLPFIDEEILFDAVYPFNDALKDDEKRRN 565
>gi|356533625|ref|XP_003535362.1| PREDICTED: 5'-3' exoribonuclease 3-like [Glycine max]
Length = 351
Score = 174 bits (440), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 84/127 (66%), Positives = 98/127 (77%), Gaps = 15/127 (11%)
Query: 122 LDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEK 181
+DADLIML+LATHEVHFS+LRE DKCFLCGQ GH AA+C+ A +FD
Sbjct: 219 MDADLIMLSLATHEVHFSVLRE--------DKCFLCGQVGHFAADCQ------AEDFD-T 263
Query: 182 GDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHM 241
D+ + KK Y+FL+IW LREYL +E IPNPPFEID+E IVDDF+F+CFFVGNDFLPHM
Sbjct: 264 PDDSSIHKKKYEFLNIWVLREYLQFELEIPNPPFEIDIERIVDDFVFLCFFVGNDFLPHM 323
Query: 242 PTLEIRE 248
PTLEIRE
Sbjct: 324 PTLEIRE 330
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 47/69 (68%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR +KD A++ AEEERLR++F EG+ L K + DSNVITPGT+FM
Sbjct: 163 MNQQRSRRFRTAKDVAEAEAEEERLRKKFMSEGKVLSSKDKPETSDSNVITPGTQFMDAD 222
Query: 61 SIALQYYIH 69
I L H
Sbjct: 223 LIMLSLATH 231
>gi|387592987|gb|EIJ88011.1| hypothetical protein NEQG_01455 [Nematocida parisii ERTm3]
Length = 613
Score = 173 bits (438), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 115/327 (35%), Positives = 165/327 (50%), Gaps = 54/327 (16%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR KD +D E FD N ITPGT FM L
Sbjct: 89 MNQQRERRFRP-KDVSDGHVEGG---------------------FDPNTITPGTPFMYRL 126
Query: 61 SIALQYYIHLRLNNDP-GWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
A+ YI R + GW+++ VI S +VPGEGEHK+ +VR + RH +
Sbjct: 127 HCAIIRYIEQRQSAGINGWKQLAVIYSGCDVPGEGEHKVYDFVRSIKG-----TGVRHAI 181
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDK--CFLCGQPGHLAANCEGKAKRKAGE 177
GLDADLI L+LATHE F +LRE VF ++++ C LC + GH NC
Sbjct: 182 CGLDADLIFLSLATHEKSFKVLREDVFFLEKEERSTCKLCKKEGHSTGNCNPNT------ 235
Query: 178 FDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIP-NPPFEIDLECIVDDFIFMCFFVGND 236
PY +L I +R YL +F N F D E I+DD+IF+CFFVGND
Sbjct: 236 -----------FPPYIYLDIDIIRRYLYTDFSTAINARF--DFERILDDWIFVCFFVGND 282
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP +P+++I+ AI + Y YLT+ SK ++ + + +G E+++ +
Sbjct: 283 FLPSIPSMDIKVAAIETITTSYINNLLTRRQYLTEDSKINIAELSVLMDTLGETEEKLLR 342
Query: 297 KRARLHQRHAERIKREKAQARRGDDVE 323
+ + ++A+R + +A R +D++
Sbjct: 343 AKLAGYVKNAKR----RGEAPREEDLK 365
Score = 124 bits (311), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 122/239 (51%), Gaps = 12/239 (5%)
Query: 386 IVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKF 445
I E +T + ++ +AKL +++ + E+ KVKL E + YY K
Sbjct: 323 IAELSVLMDTLGETEEKLLRAKLAGYVKNAKRRGEAPREEDLKVKLYEEKGRLEYYSSKM 382
Query: 446 NAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASD----LKDLD 501
+A +PE+ + + Y GL W++ YYY+G SW W+YP H+AP A D LK +
Sbjct: 383 HANSPEDI----TNGCVEYLRGLSWILQYYYKGCPSWNWYYPLHFAPLAQDIADTLKKMP 438
Query: 502 QFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGK 561
+ F G KP Q++ V P +S+ ++PE + + + + YP + ++DM GK
Sbjct: 439 HLSFDFSKGAARKPLEQVMAVLPPSSASSIPEGLYPIFNE----MPENYPDEVKIDMFGK 494
Query: 562 RYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTL 620
+WQG+A LPF D +L+ V++ L +E RN D+LF+ ++ A+ TL
Sbjct: 495 TQAWQGVALLPFFDCDKLVSLVREHSRNLPLDEIYRNVEGCDLLFLPTANKNYATAETL 553
>gi|378755557|gb|EHY65583.1| hypothetical protein NERG_01190 [Nematocida sp. 1 ERTm2]
Length = 613
Score = 173 bits (438), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 112/301 (37%), Positives = 157/301 (52%), Gaps = 32/301 (10%)
Query: 15 AADSAAEEERLRQEFEREGRKLPPKSDSQV---FDSNVITPGTEFMAVLSIALQYYIHLR 71
A D A ++ Q+ ER R P +D V FD N ITPGT FM L A+ YI R
Sbjct: 79 AVDGVAPRAKMNQQRERRFRPKDP-TDGHVEGGFDPNTITPGTPFMYRLHTAITRYIEQR 137
Query: 72 LNNDP-GWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 130
+ GW+++ VI S +VPGEGEHKI +VR ++ G RH + GLDADLI L+
Sbjct: 138 QSAGVNGWKQLAVIYSGCDVPGEGEHKIYDFVR---SIKG--SGVRHVICGLDADLIFLS 192
Query: 131 LATHEVHFSILREVVFTPGQQDK--CFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 188
LATHE F +LRE VF ++++ C LC + GH NC A
Sbjct: 193 LATHEQSFRVLREDVFFLEREERSSCQLCKKDGHSTGNCNPNAF---------------- 236
Query: 189 KKPYQFLHIWTLREYLDYEFRIP-NPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIR 247
PY +L I +R YL +F N F D E I+DD+IF+CFFVGNDFLP +P+++I+
Sbjct: 237 -PPYIYLDIDIIRRYLYTDFSTAINARF--DFERILDDWIFVCFFVGNDFLPSIPSMDIK 293
Query: 248 EGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAE 307
AI + Y YLT K ++ + ++ +G ED + + + + + A+
Sbjct: 294 VAAIETITGSYLTNLITRRAYLTQDRKINMEELAVLMKTLGEQEDALLRSKLSCYVKAAK 353
Query: 308 R 308
R
Sbjct: 354 R 354
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 126/246 (51%), Gaps = 30/246 (12%)
Query: 396 DPQENKEEFKAKLKEL-------LRDKSDAF--------NSDNPEEDKVKLGEPGWKERY 440
D + N EE +K L LR K + + E+ ++KL E + Y
Sbjct: 318 DRKINMEELAVLMKTLGEQEDALLRSKLSCYVKAAKRRGETPRDEDLRIKLFEEKGRNEY 377
Query: 441 YEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKD- 499
Y+ K +A TPEE + + Y +GL W++ YYY G SW+W+YP H+AP A D+ +
Sbjct: 378 YQMKMHASTPEEITNS----CIEYIKGLSWILEYYYNGCPSWEWYYPMHFAPLARDIAET 433
Query: 500 -LDQFNIS--FELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEV 556
L NIS FE+G KP Q++ V P +SS ++PE + D + + YP ++
Sbjct: 434 LLSHPNISFEFEVGKARKPLEQVMAVLPQSSSSSIPEGLYPIFKD----MPENYPETIKI 489
Query: 557 DMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLL---SHPL 613
DM GK +WQG+ +PF+D +++ V++ L E+ RN D+LF+ ++ L
Sbjct: 490 DMFGKTQAWQGVPLIPFLDCDKMVTLVREYSADLPLEDIYRNVEGQDLLFLPTENKNYTL 549
Query: 614 SASIYT 619
S+YT
Sbjct: 550 GESVYT 555
>gi|118388580|ref|XP_001027386.1| XRN 5'-3' exonuclease N-terminus family protein [Tetrahymena
thermophila]
gi|89309156|gb|EAS07144.1| XRN 5'-3' exonuclease N-terminus family protein [Tetrahymena
thermophila SB210]
Length = 1793
Score = 172 bits (436), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 111/332 (33%), Positives = 166/332 (50%), Gaps = 52/332 (15%)
Query: 2 NQQRSRRFRAS---KDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMA 58
NQQR+RRF+++ KD DS R S+ + +N I+ GTEFM
Sbjct: 98 NQQRTRRFQSAQSWKDLNDSL--------------RNCGFLSEGETMKNNSISTGTEFMH 143
Query: 59 VLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHC 118
L+ L +YI + DP W ++V S +NVPGEGEHKI++++ + YDP T HC
Sbjct: 144 DLNKQLHFYICKKFEQDPRWSNLEVFFSGSNVPGEGEHKIINFMHQYCSSQDYDPTTTHC 203
Query: 119 LYGLDADLIMLALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGE 177
+YG DADLIML L+TH + SILR E+ F P P AA K R++
Sbjct: 204 IYGADADLIMLGLSTHIKYVSILREEMKFQP-----------PVSRAA----KRDRESVT 248
Query: 178 FDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRI---PNPPFEIDLECIVDDFIFMCFFVG 234
F Q +++ +REY++ E+++ E ++E ++DDF+ +C F+G
Sbjct: 249 F--------------QMIYLNIVREYMELEYKMLWKKVKKLEFNIERVIDDFLLICCFIG 294
Query: 235 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYE-DR 293
NDFLP + IREG +L+ +YK YL D + ++ IQ + E D
Sbjct: 295 NDFLPRLYCFNIREGQFEILIQIYKDYLVEADSYLNDNGHINWVGLQQIIQRIAEVELDF 354
Query: 294 IFQKRARLHQRHAERIKREKAQARR-GDDVEP 324
I K + + + RIK + + + GDD P
Sbjct: 355 IGDKATDITKEYKRRIKHQSDKDQEIGDDEVP 386
Score = 107 bits (267), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 96/175 (54%), Gaps = 13/175 (7%)
Query: 437 KERYYEEKFNAKTPEEREETRKDVVL-RYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 495
K YY++K N + D+++ +Y EGL +V+ YYY+G SW W++P++YAP S
Sbjct: 501 KSYYYQQKLNLDFKNFDDIKTLDLLITKYLEGLQFVLLYYYQGCPSWSWYFPFYYAPMTS 560
Query: 496 DLKDLDQFN-------ISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPI-- 546
D+ + I F+L P+ P QL+ + +++ LP+ + +L+TDPNS +
Sbjct: 561 DISLFLNYKAEHLSQEIVFDLSEPYPPMKQLMCIIHPENANLLPKPFAQLLTDPNSKLRS 620
Query: 547 -SDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEH--TLTEEEARRN 598
D+YP F +D G +S + I LPF+D+ + D I+ TLT +E RN
Sbjct: 621 PVDYYPDKFTIDPYGGVFSHEYIVVLPFMDQKLIDDVYSSIDQVKTLTPQERERN 675
>gi|71030174|ref|XP_764729.1| hypothetical protein [Theileria parva strain Muguga]
gi|68351685|gb|EAN32446.1| hypothetical protein TP02_0165 [Theileria parva]
Length = 1726
Score = 172 bits (436), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 153/573 (26%), Positives = 239/573 (41%), Gaps = 143/573 (24%)
Query: 3 QQRSRRFRASKDAADSAAEEERLRQE---FEREGRKLPPKSDSQV--------------- 44
QQR RRFRA+ ++ + L+ E L + D V
Sbjct: 171 QQRERRFRAALESTQQLIISQSLKSTNTHLEPSLHNLQCEPDESVQCEPDESVRDKEEFK 230
Query: 45 FDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRL 104
FD ITPGT FM L++ LQ++ +N + W +K+++S ++VPGEGEHKIM Y+R
Sbjct: 231 FDPIQITPGTAFMERLTVRLQFFALKMINENEQWRNLKIVVSGSDVPGEGEHKIMEYIRN 290
Query: 105 QR------------------------NLPGYDPNTRHCLYGLDADLIMLALATHEVHFSI 140
+ ++ G HC+YGLDADLI+L+LATHE + +
Sbjct: 291 NKAHRHSQFHHPRTQLDNRNNTTQLDSVSGERNCVSHCVYGLDADLIVLSLATHEPYICL 350
Query: 141 LRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWT 199
LRE VVF GH+ + + + ++V Y LH+
Sbjct: 351 LREQVVF--------------GHMKNSSKLR--------------MMVNMNSYILLHVGI 382
Query: 200 LREYLDYEF----RIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLM 255
LREYL + R+ + P ID +VDDF+F+ FVGNDFLPH+ I +G N +
Sbjct: 383 LREYLVTDLVEDPRLRSDPSVIDR--VVDDFVFLTMFVGNDFLPHLLMASIPDGGFNHTL 440
Query: 256 AVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQ 315
+Y++ YL++ SLR+ H + + + LH H+E KR+
Sbjct: 441 QIYRE-------YLSE----SLRK--HNLHS-----------KHNLHNSHSE--KRDVWL 474
Query: 316 ARRGDDVEPLAQPDSLVPV----SRFHGSRLASGPSP-------SPYQQSECVGRLDNGK 364
+V D+LV +R+ L + + +P + V ++ +
Sbjct: 475 TSGCGEV----NYDNLVLFMTRWARYENRTLQNNLTAELDKTTFNPQNNTSKVVNFNSNR 530
Query: 365 GTSGRPHKVPRLSSGA--TIGAAIVEAENS-FETDPQENKEEF----------------- 404
++ ++V S A +++ NS ETD + ++
Sbjct: 531 VSNFNSNRVSNHSDSAKSKCSITVIDVRNSRIETDLSDFSSKYPGEPRTLAEYRNRYYLA 590
Query: 405 KAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRY 464
K + L + NS N + L N+ T +DVV Y
Sbjct: 591 KLGISNQLVKCQRSTNSTNSVNSVISLNSV-----ISLNSVNSLNSVNTVNTVEDVVREY 645
Query: 465 TEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDL 497
G+ W+++YYY GV SW WF P Y PF +D+
Sbjct: 646 LHGIQWILYYYYRGVPSWNWFLPCKYPPFVNDI 678
Score = 68.2 bits (165), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%)
Query: 505 ISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYS 564
I+F G P P+ QL+ V P S+H LP + KL+TD +SP+ +YP F+VDM+
Sbjct: 756 ITFVRGRPITPYEQLMLVLPPQSAHFLPSVFSKLITDQDSPLHQYYPLHFDVDMDNTNVP 815
Query: 565 WQGIAKLPFIDEARLL 580
W GI +P + LL
Sbjct: 816 WGGITLIPHVPYPLLL 831
>gi|326437826|gb|EGD83396.1| single-stranded RNA 5'-3' exonuclease [Salpingoeca sp. ATCC 50818]
Length = 1780
Score = 172 bits (436), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 117/360 (32%), Positives = 175/360 (48%), Gaps = 83/360 (23%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
M QQR RRF+A+ R R++F+++ P D+ FDSN ITPGTEFMA L
Sbjct: 92 MIQQRQRRFKAA-----------RARKQFQQDN---PEHGDA--FDSNCITPGTEFMATL 135
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L Y+I ++ D W ++V+LS VPGEGEHKIM +VR ++ YDPNTRHC++
Sbjct: 136 EEYLIYFIQRKVEEDAAWRDLEVVLSGHRVPGEGEHKIMDFVRRLKSQESYDPNTRHCIH 195
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIMLALATHE HF I+RE V + ++ +
Sbjct: 196 GLDADLIMLALATHEPHFCIVREKVLV--------------------RKRGRKIVNDLTS 235
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPN--PPFE--------------ID------ 218
K V + Q +HI LREYL E + N P F +D
Sbjct: 236 KA-TVFQHTQELQLIHIGLLREYLHLELSLRNIGPDFRQGLVSSAAALRDAMVDAKFRQL 294
Query: 219 ----------------LECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEF 262
+E ++DDF+F+ F +GNDFLPH+ ++ + ++ + + Y++
Sbjct: 295 PEEMQALRTSVVQSRNVERLIDDFVFLTFLLGNDFLPHLVCADLDDDGLDAIFSAYREAI 354
Query: 263 R---ALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARRG 319
YL D K ++ F++AV R ++ +++ A+ K + +++RG
Sbjct: 355 TREDLKTQYLVDAEKATVNLA--FLRAVFEVFSRTEEQG---YKQEAQTEKSKSTKSKRG 409
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 90/176 (51%), Gaps = 10/176 (5%)
Query: 429 VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPY 488
V +G+ + YY KF + E R +V Y EGL W ++YYY+GV SW WFYP+
Sbjct: 971 VGVGDISTVDDYYRVKF--EDVEGHPVDRVVLVKEYLEGLLWTLNYYYQGVASWSWFYPH 1028
Query: 489 HYAPFASD-LKDLDQF-NISFEL-GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 545
+ AP +D L D +I+F+ P PF QLL V P+ SS LP R L D
Sbjct: 1029 YAAPLPTDVLAACDVLPSIAFDAETTPLLPFQQLLTVLPAESSQLLPPSLRPLPLD---Q 1085
Query: 546 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHT--LTEEEARRNS 599
+ +FYP+++ + + W+ I +P ID +L + L++EE RNS
Sbjct: 1086 LKEFYPSEYPCVPDVRGREWRDIVVIPVIDGEKLHSAYTRAIAAAPLSDEETARNS 1141
>gi|350289466|gb|EGZ70691.1| hypothetical protein NEUTE2DRAFT_92294 [Neurospora tetrasperma FGSC
2509]
Length = 531
Score = 172 bits (436), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 109/154 (70%), Gaps = 9/154 (5%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQV-------FDSNVITPG 53
MNQQRSRRFRA+++A + ++++ + +++ K P+ + V FDSN ITPG
Sbjct: 112 MNQQRSRRFRAAREAMEKEEDKQKFVELLKKQNGK--PQEEEPVEIVVKKAFDSNSITPG 169
Query: 54 TEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDP 113
T FM +L+ +L+Y+ +LN DP W IKVI+SDA VPGEGEHKIM +VR QR P +DP
Sbjct: 170 TPFMDILAASLRYWCSYKLNTDPAWANIKVIISDATVPGEGEHKIMEFVRSQRGSPNHDP 229
Query: 114 NTRHCLYGLDADLIMLALATHEVHFSILREVVFT 147
NTRH +YGLDADLIML LATHE HF +LRE VF
Sbjct: 230 NTRHVIYGLDADLIMLGLATHEPHFRVLREDVFA 263
>gi|66475504|ref|XP_627568.1| Kem1p-like 5'-3' exonuclease [Cryptosporidium parvum Iowa II]
gi|46229016|gb|EAK89865.1| Kem1p-like 5'-3' exonuclease [Cryptosporidium parvum Iowa II]
Length = 1588
Score = 172 bits (435), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 110/290 (37%), Positives = 157/290 (54%), Gaps = 72/290 (24%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQ--VFDSNVITPGTEFMA 58
MNQQRSRRFR+++D+ EF ++ K +Q VFDSN ITPGT FM
Sbjct: 100 MNQQRSRRFRSARDS------------EFLKKMEKNNSIDTTQNNVFDSNCITPGTTFMH 147
Query: 59 VLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHC 118
L L+++I+ +++ DP W+ ++V+LS A+VPGEGEHKIM ++R ++ Y+ NT HC
Sbjct: 148 ELRRQLEFFIYHQIHTDPLWKHLEVVLSGADVPGEGEHKIMDFIRCIKSQRDYNNNTTHC 207
Query: 119 LYGLDADLIMLALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGE 177
LYGLDADLIML+LA+HE HFS+LR E+ F+ + N E +
Sbjct: 208 LYGLDADLIMLSLASHEPHFSLLREEIKFSSSR---------------NYESRT------ 246
Query: 178 FDEKGDEVVVPKKPYQFLHIWTLREYL------------------DYEFRIPNPP----- 214
V K+ +QFLHI LR+Y+ Y+F + N
Sbjct: 247 --------VCTKERFQFLHISILRDYIINDLNPRNLSVEELNLCFGYKFGLKNDSQDQIS 298
Query: 215 ----FEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKK 260
ID E ++DDFI + F VGNDFLPH+P + +G ++ + Y+K
Sbjct: 299 IFDNVLIDGERLIDDFIILGFIVGNDFLPHIPFHTVDQGLARIISS-YRK 347
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 91/179 (50%), Gaps = 39/179 (21%)
Query: 444 KFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLK----- 498
K N + + +D+V Y EGL WV +YY+ GV SW+W+YPY YAPFA D+
Sbjct: 476 KSNTNSNRITTNSIEDIVFCYLEGLQWVSYYYFRGVPSWRWYYPYRYAPFACDIAIILSC 535
Query: 499 ----------------------------------DLDQFNISFELGHPFKPFNQLLGVFP 524
+L+ F G+P +PF QL+GV P
Sbjct: 536 WLQNKSISTLSRDDIVKYGSSKLMFVHTMYSEEIELNGLAFRFIKGNPLQPFEQLMGVLP 595
Query: 525 SASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEV 583
S S LP+ +RKL T+PNSP+ FYP +FEVDM G + W G+ +PFIDE LLD +
Sbjct: 596 SNSKDLLPKPFRKLFTNPNSPLLSFYPANFEVDMEGVKVPWGGVTLIPFIDEFLLLDSI 654
>gi|47198701|emb|CAF89019.1| unnamed protein product [Tetraodon nigroviridis]
Length = 220
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/247 (39%), Positives = 138/247 (55%), Gaps = 41/247 (16%)
Query: 53 GTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANV---------PGEGEHKIMSYVR 103
GT+FMA L L+Y++H +L+ D W+ ++V LS V PGEGEHKIM ++R
Sbjct: 1 GTDFMARLQEQLEYFVHSKLSTDKLWQNVRVYLSGHEVRSQSTPTLTPGEGEHKIMEFIR 60
Query: 104 LQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHL 163
+ N PG+DPNTRHCLYGLDADLIML L +HE +FS+LRE V G++ +
Sbjct: 61 SENNGPGHDPNTRHCLYGLDADLIMLGLTSHEPNFSLLREEVRFGGKKSQ---------- 110
Query: 164 AANCEGKAKRKAGEFDEKGDEVVVPKK-PYQFLHIWTLREYLDYEFRIPNPPF--EIDLE 220
KR + P++ + LH+ +REY+DYEF + DLE
Sbjct: 111 --------KR-----------ITAPEETTFHLLHLSLMREYIDYEFSVLRNHLGSTYDLE 151
Query: 221 CIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRV 280
I+DD+I M F +GNDF+PH+P L I A+ LL Y +L GYL + +L+
Sbjct: 152 RIIDDWILMGFLIGNDFIPHLPHLHISHDALPLLYKTYISVLPSLRGYLNENGNLNLKNF 211
Query: 281 EHFIQAV 287
E +++ +
Sbjct: 212 EKYLEKL 218
>gi|32398787|emb|CAD98497.1| exonuclease ii, possible [Cryptosporidium parvum]
Length = 1572
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 110/290 (37%), Positives = 157/290 (54%), Gaps = 72/290 (24%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQ--VFDSNVITPGTEFMA 58
MNQQRSRRFR+++D+ EF ++ K +Q VFDSN ITPGT FM
Sbjct: 100 MNQQRSRRFRSARDS------------EFLKKMEKNNSIDTTQNNVFDSNCITPGTTFMH 147
Query: 59 VLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHC 118
L L+++I+ +++ DP W+ ++V+LS A+VPGEGEHKIM ++R ++ Y+ NT HC
Sbjct: 148 ELRRQLEFFIYHQIHTDPLWKHLEVVLSGADVPGEGEHKIMDFIRCIKSQRDYNNNTTHC 207
Query: 119 LYGLDADLIMLALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGE 177
LYGLDADLIML+LA+HE HFS+LR E+ F+ + N E +
Sbjct: 208 LYGLDADLIMLSLASHEPHFSLLREEIKFSSSR---------------NYESRT------ 246
Query: 178 FDEKGDEVVVPKKPYQFLHIWTLREYL------------------DYEFRIPNPP----- 214
V K+ +QFLHI LR+Y+ Y+F + N
Sbjct: 247 --------VCTKERFQFLHISILRDYIINDLNPRNLSVEELNLCFGYKFGLKNDSQDQIS 298
Query: 215 ----FEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKK 260
ID E ++DDFI + F VGNDFLPH+P + +G ++ + Y+K
Sbjct: 299 IFDNVLIDGERLIDDFIILGFIVGNDFLPHIPFHTVDQGLARIISS-YRK 347
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 91/179 (50%), Gaps = 39/179 (21%)
Query: 444 KFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLK----- 498
K N + + +D+V Y EGL WV +YY+ GV SW+W+YPY YAPFA D+
Sbjct: 476 KSNTNSNRITTNSIEDIVFCYLEGLQWVSYYYFRGVPSWRWYYPYRYAPFACDIAIILSC 535
Query: 499 ----------------------------------DLDQFNISFELGHPFKPFNQLLGVFP 524
+L+ F G+P +PF QL+GV P
Sbjct: 536 WLQNKSISTLSRDDIVKYGSSKLMFVHTMYSEEIELNGLAFRFIKGNPLQPFEQLMGVLP 595
Query: 525 SASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEV 583
S S LP+ +RKL T+PNSP+ FYP +FEVDM G + W G+ +PFIDE LLD +
Sbjct: 596 SNSKDLLPKPFRKLFTNPNSPLLSFYPANFEVDMEGVKVPWGGVTLIPFIDEFLLLDSI 654
>gi|340508935|gb|EGR34531.1| hypothetical protein IMG5_008400 [Ichthyophthirius multifiliis]
Length = 263
Score = 171 bits (434), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 80/162 (49%), Positives = 119/162 (73%), Gaps = 4/162 (2%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQV---FDSNVITPGTEFM 57
MNQQR+RRF+ +K+A + ++ + E ++G +P + V FD+NVITPGT+FM
Sbjct: 102 MNQQRARRFKGAKEAVELQKKKLEIINEQRQQGEDIPEEVMRFVESKFDTNVITPGTQFM 161
Query: 58 AVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRH 117
LSIALQ+Y+ R+NN P W+ +KV+ SDA++PGEGEHKI++++R+QR+ YDPN++H
Sbjct: 162 RDLSIALQHYVLDRVNNHPLWKNLKVVFSDASIPGEGEHKILNFIRIQRSQDQYDPNSKH 221
Query: 118 CLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQ 159
CLYG DADL+ML L+THE +F I+RE + + + +C +CGQ
Sbjct: 222 CLYGADADLLMLGLSTHEPYFYIIREQIIS-NDEKRCSVCGQ 262
>gi|193784826|dbj|BAG53979.1| unnamed protein product [Homo sapiens]
Length = 805
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 131/238 (55%), Gaps = 33/238 (13%)
Query: 57 MAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTR 116
MA L L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTR
Sbjct: 1 MARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTR 60
Query: 117 HCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAG 176
HCLYGLDADLIML L +HE HFS+LRE V G+
Sbjct: 61 HCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGK-------------------------- 94
Query: 177 EFDEKGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFV 233
K V P++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F V
Sbjct: 95 ----KTQRVCAPEETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLV 150
Query: 234 GNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYE 291
GNDF+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++
Sbjct: 151 GNDFIPHLPHLHINHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFD 208
Score = 170 bits (430), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 115/189 (60%), Gaps = 3/189 (1%)
Query: 410 ELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLC 469
E++ K D + ++D + +K YY K + + D Y + +
Sbjct: 269 EMITSK-DNLEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQ 325
Query: 470 WVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSH 529
W++HYYY GV SW W+YPYHYAPF SD+ ++ I FELG PFKPF QLL V P+AS +
Sbjct: 326 WILHYYYHGVQSWSWYYPYHYAPFLSDIHNISTLKIHFELGKPFKPFEQLLAVLPAASKN 385
Query: 530 ALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHT 589
LP Y+ LMT+ +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+
Sbjct: 386 LLPACYQHLMTNEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHS 445
Query: 590 LTEEEARRN 598
L +EE +RN
Sbjct: 446 LKKEERKRN 454
>gi|242218321|ref|XP_002474952.1| predicted protein [Postia placenta Mad-698-R]
gi|220725867|gb|EED79836.1| predicted protein [Postia placenta Mad-698-R]
Length = 253
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/154 (55%), Positives = 109/154 (70%), Gaps = 11/154 (7%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR +K+A + +R++ E++G KLP D + FDSN ITPGTEFMA L
Sbjct: 106 MNQQRSRRFRTAKEARE-------IREKAEQKGEKLP---DQKAFDSNCITPGTEFMAKL 155
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S L+Y+I+ +++ D W I V+LS +VPGEGEHK+M Y+RL R P YDPN RHCLY
Sbjct: 156 SEQLRYFINKKISEDSNWRDITVVLSGHDVPGEGEHKVMEYIRLSRAQPDYDPNVRHCLY 215
Query: 121 GLDADLIMLALATHEVHFSILR-EVVFTPGQQDK 153
GLDADLIML L +H+ HF +LR EV F P + K
Sbjct: 216 GLDADLIMLGLLSHDPHFCLLREEVKFGPASKSK 249
>gi|387596301|gb|EIJ93923.1| hypothetical protein NEPG_01495 [Nematocida parisii ERTm1]
Length = 613
Score = 170 bits (430), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 114/327 (34%), Positives = 164/327 (50%), Gaps = 54/327 (16%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR KD +D E FD N ITPGT FM L
Sbjct: 89 MNQQRERRFRP-KDVSDGHVEGG---------------------FDPNTITPGTPFMYRL 126
Query: 61 SIALQYYIHLRLNNDP-GWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
A+ YI R + GW+++ VI S +VPGEGEHK+ +VR + RH +
Sbjct: 127 HCAIIRYIEQRQSAGINGWKQLAVIYSGCDVPGEGEHKVYDFVRSIKG-----TGVRHAI 181
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDK--CFLCGQPGHLAANCEGKAKRKAGE 177
GLDADLI L+LATHE F +LRE VF ++++ C LC + GH NC
Sbjct: 182 CGLDADLIFLSLATHEKSFKVLREDVFFLEKEERSTCKLCKKEGHSTGNCNPNT------ 235
Query: 178 FDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIP-NPPFEIDLECIVDDFIFMCFFVGND 236
PY +L I +R YL +F N F D E I+DD+IF+CFFVGND
Sbjct: 236 -----------FPPYIYLDIDIIRRYLYTDFSTAINARF--DFERILDDWIFVCFFVGND 282
Query: 237 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
FLP +P+++I+ AI + YLT+ SK ++ + + +G E+++ +
Sbjct: 283 FLPSIPSMDIKVAAIETITTSCINNLLTRRQYLTEDSKINIAELSVLMDTLGETEEKLLR 342
Query: 297 KRARLHQRHAERIKREKAQARRGDDVE 323
+ + ++A+R + +A R +D++
Sbjct: 343 AKLAGYVKNAKR----RGEAPREEDLK 365
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 123/239 (51%), Gaps = 12/239 (5%)
Query: 386 IVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKF 445
I E +T + ++ +AKL +++ + E+ KVKL E + YY K
Sbjct: 323 IAELSVLMDTLGETEEKLLRAKLAGYVKNAKRRGEAPREEDLKVKLYEEKGRLEYYSSKI 382
Query: 446 NAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASD----LKDLD 501
+A +PE+ +V + Y GL W++ YYY+G SW W+YP H+AP A D LK +
Sbjct: 383 HANSPEDI----TNVCVEYLRGLSWILQYYYKGCPSWNWYYPLHFAPLAQDIADTLKKMP 438
Query: 502 QFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGK 561
+ F G KP Q++ V P +S+ ++PE + + + + YP + ++DM GK
Sbjct: 439 HLSFDFSKGAARKPLEQVMAVLPPSSASSIPEGLYPIFNE----MPENYPDEVKIDMFGK 494
Query: 562 RYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTL 620
+WQG+A LPF D +L+ V++ L +E RN D+LF+ ++ A+ TL
Sbjct: 495 TQAWQGVALLPFFDCDKLVSLVREHSRNLPLDEIYRNVEGCDLLFLPTANKNYATAETL 553
>gi|90078106|dbj|BAE88733.1| unnamed protein product [Macaca fascicularis]
Length = 417
Score = 169 bits (429), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 77/182 (42%), Positives = 111/182 (60%), Gaps = 2/182 (1%)
Query: 417 DAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYY 476
D + ++D + +K YY K + + D Y + + W++HYYY
Sbjct: 6 DNLEDETEDDDLFETEFRQYKRTYYMTKMGVDIVSD--DFLADQAACYVQAIQWILHYYY 63
Query: 477 EGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYR 536
GV SW W+YPYHYAPF SD++++ I FELG PFKPF QLL V P+AS + LP Y+
Sbjct: 64 HGVQSWSWYYPYHYAPFLSDIRNISTLRIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQ 123
Query: 537 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 596
LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +
Sbjct: 124 HLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERK 183
Query: 597 RN 598
RN
Sbjct: 184 RN 185
>gi|312371116|gb|EFR19376.1| hypothetical protein AND_22597 [Anopheles darlingi]
Length = 374
Score = 168 bits (426), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 109/191 (57%), Gaps = 14/191 (7%)
Query: 420 NSDNPEEDKVKLGE------------PGWKERYYEEKFNAKTPEEREETRKDVVLRYTEG 467
+ D EE ++ +G+ +K YY K + E+ R + Y
Sbjct: 4 SGDEDEESQISVGDIENDPVLFEKEFKSYKRNYYMTKMG--YADFNEDVRAEQAECYIRA 61
Query: 468 LCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSAS 527
L W +HYYY GV SW W+YP+HYAPF SD+ D + F++ PF PF QLL V P+AS
Sbjct: 62 LQWTLHYYYRGVVSWSWYYPHHYAPFISDVDHFDHLKLEFDMARPFLPFQQLLSVLPAAS 121
Query: 528 SHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIE 587
LP Y +LM DPNSP+ DFYP +F D+NGK+ SW+ + +PFIDE RLL +K +
Sbjct: 122 KSHLPAAYHQLMIDPNSPVYDFYPPEFSTDLNGKQQSWEAVVLIPFIDERRLLKAMKTCD 181
Query: 588 HTLTEEEARRN 598
LT+EE +RN
Sbjct: 182 EYLTDEEKQRN 192
>gi|349604424|gb|AEP99978.1| 5'-3' exoribonuclease 1-like protein, partial [Equus caballus]
Length = 514
Score = 168 bits (426), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 70/135 (51%), Positives = 98/135 (72%)
Query: 464 YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVF 523
Y + + W++HYYY GV SW W+YPYHYAPF SD++++ +I FELG PFKPF QLL V
Sbjct: 202 YVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIRNISALSIHFELGKPFKPFEQLLAVL 261
Query: 524 PSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEV 583
P+AS + LP Y+ LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ +
Sbjct: 262 PAASKNLLPTCYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAM 321
Query: 584 KKIEHTLTEEEARRN 598
+ H+L +EE +RN
Sbjct: 322 ETCNHSLKKEERKRN 336
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 205 DYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKK-E 261
DYEF + F+ D+E I+DD+I M F VGNDF+PH+P L I A+ LL Y
Sbjct: 1 DYEFSVLKDKIAFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDALPLLYGTYILPS 60
Query: 262 FRALGGYLTDGSKPSLRRVEHFIQAVGSYE 291
+ LGGY+ + +L R E ++ + ++
Sbjct: 61 CQNLGGYINESGHLNLPRFEKYLVKLSDFD 90
>gi|302697115|ref|XP_003038236.1| hypothetical protein SCHCODRAFT_255205 [Schizophyllum commune H4-8]
gi|300111933|gb|EFJ03334.1| hypothetical protein SCHCODRAFT_255205 [Schizophyllum commune H4-8]
Length = 1480
Score = 166 bits (420), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 81/148 (54%), Positives = 108/148 (72%), Gaps = 2/148 (1%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPP--KSDSQVFDSNVITPGTEFMA 58
MNQQRSRRFRAS++A + + ++ G++L K+ +DSN ITPGT FM
Sbjct: 119 MNQQRSRRFRASQEAQEKEDARAESLELWKSMGKELTDEMKNPKAAWDSNAITPGTPFMT 178
Query: 59 VLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHC 118
+L+ +L+Y+ ++N DP W+ I+VI+SDA+VPGEGEHKIM ++R QR PG+DPNT H
Sbjct: 179 LLANSLRYWTVQKMNEDPAWKGIQVIISDASVPGEGEHKIMDFIRRQRVNPGHDPNTEHV 238
Query: 119 LYGLDADLIMLALATHEVHFSILREVVF 146
+YGLDADLIML+LATHE HF +LRE VF
Sbjct: 239 IYGLDADLIMLSLATHEPHFRVLREDVF 266
Score = 63.5 bits (153), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 38/54 (70%), Gaps = 2/54 (3%)
Query: 425 EEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEG 478
+ D V+L EPG+KERYY+ KF + + EE RKDV +Y EGL WV+ YYY+G
Sbjct: 553 QADHVQLWEPGYKERYYKNKFGKEYSD--EEFRKDVTTKYMEGLAWVLQYYYQG 604
>gi|195164006|ref|XP_002022840.1| GL14782 [Drosophila persimilis]
gi|194104863|gb|EDW26906.1| GL14782 [Drosophila persimilis]
Length = 1039
Score = 166 bits (419), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 87/216 (40%), Positives = 125/216 (57%), Gaps = 12/216 (5%)
Query: 392 SFETDPQE--NKEEFKAKLKELLRDKSDAFNSDNPEEDK-----VKLGEPGWKERYYEEK 444
+F+ D E + +++ + LK L+ D + +N D+ E+ V +K YY K
Sbjct: 195 AFDIDVGEISSSKDYDSDLKALIDDSTQLYNDDSDEDLSDEEAGVLKDFQNYKRNYYRNK 254
Query: 445 FN--AKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQ 502
FN ++ P + E ++ Y L W++ YYY GV SW W+YP+HYAPF SDL ++
Sbjct: 255 FNLSSRPPNQLIE---ELGHHYVTALQWILDYYYRGVQSWDWYYPFHYAPFISDLNNIAT 311
Query: 503 FNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKR 562
I F+LG PF PF QLLGV P+AS LP Y LM P SP+++FYPTDF+ D+NGK+
Sbjct: 312 VQIKFQLGTPFLPFEQLLGVLPAASFKLLPTAYHDLMLKPTSPLAEFYPTDFKSDLNGKK 371
Query: 563 YSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
W+ + +PFIDE LL ++ E L+ E RN
Sbjct: 372 NDWEAVVLIPFIDECLLLSVMRACEAHLSTAERARN 407
Score = 56.6 bits (135), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%)
Query: 228 FMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAV 287
M F VGNDF+PH+P L I A+ LL Y + + +LGG + + K +L+R++ F+ A+
Sbjct: 112 LMGFMVGNDFIPHLPCLHISSNALPLLYKTYIRIYHSLGGNINEHGKLNLQRLQIFMTAL 171
Query: 288 GSYEDRIFQKRA 299
E +++ A
Sbjct: 172 SEVELEQYKEHA 183
>gi|321466089|gb|EFX77086.1| hypothetical protein DAPPUDRAFT_31800 [Daphnia pulex]
Length = 288
Score = 163 bits (413), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 98/278 (35%), Positives = 140/278 (50%), Gaps = 46/278 (16%)
Query: 15 AADSAA-EEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLN 73
A D A +R +Q R GR P + + FD N ++PGT FM LS L Y+ +L+
Sbjct: 56 ALDGVAPRAKRTQQRIRRFGRSKPNQDE---FDGNCVSPGTSFMCTLSKNLMLYVDRKLS 112
Query: 74 NDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALAT 133
NDP W+ I VI SD+NVPGEGEHKI ++R QR P +DP T+H + G DADLI+L LA+
Sbjct: 113 NDPQWKNISVIFSDSNVPGEGEHKIADFIRQQRTQPCHDPVTKHVICGNDADLILLGLAS 172
Query: 134 HEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQ 193
HE + ++LR G P + +
Sbjct: 173 HETNVTLLR---------------GDPN---------------------------SRKWI 190
Query: 194 FLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINL 253
F+ I LRE L+ EFR + PF+ LE IVDD+IF+C +GNDFLP + + +
Sbjct: 191 FVGIHILRECLNEEFRGSDFPFDYHLERIVDDWIFLCILLGNDFLPSFQIFKNPDRTLTH 250
Query: 254 LMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYE 291
L+ + K + +LT + +V+H + +G E
Sbjct: 251 LVRICKDAYNKNQDWLTHNGSINSVQVKHIMSELGRME 288
>gi|321466088|gb|EFX77085.1| hypothetical protein DAPPUDRAFT_24169 [Daphnia pulex]
Length = 288
Score = 163 bits (413), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 98/278 (35%), Positives = 140/278 (50%), Gaps = 46/278 (16%)
Query: 15 AADSAA-EEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLN 73
A D A +R +Q R GR P + + FD N ++PGT FM LS L Y+ +L+
Sbjct: 56 ALDGVAPRAKRTQQRIRRFGRSKPNQDE---FDGNCVSPGTSFMCTLSKNLMLYVDRKLS 112
Query: 74 NDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALAT 133
NDP W+ I VI SD+NVPGEGEHKI ++R QR P +DP T+H + G DADLI+L LA+
Sbjct: 113 NDPQWKNISVIFSDSNVPGEGEHKIADFIRQQRTQPCHDPVTKHVICGNDADLILLGLAS 172
Query: 134 HEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQ 193
HE + ++LR G P + +
Sbjct: 173 HETNVTLLR---------------GDPN---------------------------SRKWI 190
Query: 194 FLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINL 253
F+ I LRE L+ EFR + PF+ LE IVDD+IF+C +GNDFLP + + +
Sbjct: 191 FVGIHILRECLNEEFRGSDFPFDYHLERIVDDWIFLCILLGNDFLPSFQIFKNPDRTLTH 250
Query: 254 LMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYE 291
L+ + K + +LT + +V+H + +G E
Sbjct: 251 LVRICKDAYNKNQDWLTHNGSINSVQVKHIMSELGRME 288
>gi|260944866|ref|XP_002616731.1| hypothetical protein CLUG_03972 [Clavispora lusitaniae ATCC 42720]
gi|238850380|gb|EEQ39844.1| hypothetical protein CLUG_03972 [Clavispora lusitaniae ATCC 42720]
Length = 327
Score = 163 bits (412), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 119/190 (62%), Gaps = 15/190 (7%)
Query: 21 EEERLRQEFEREGRKLPPK-SDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWE 79
E+ER +EFE G+ + + +D+N ITPGT FM L++AL+Y++ +L +DPGW
Sbjct: 128 EKERQIREFEARGQAIDDAIKGKKSWDTNAITPGTPFMDGLALALRYWVAHKLASDPGWR 187
Query: 80 KIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFS 139
++VI+SDA VPGEGEHK+MS++R QR P YD NTRHC+YGLDADLI L LATHE HF
Sbjct: 188 DLQVIVSDATVPGEGEHKLMSFIRSQRADPQYDANTRHCIYGLDADLIFLGLATHEPHFR 247
Query: 140 ILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWT 199
+LRE VF G + + Q + A++ A KKP+ +LH+
Sbjct: 248 VLREDVFAQG-NGRMRVADQLQITQDQRDAIAEQDA-------------KKPFLWLHVNV 293
Query: 200 LREYLDYEFR 209
LREYL+ E R
Sbjct: 294 LREYLEVELR 303
>gi|367024791|ref|XP_003661680.1| hypothetical protein MYCTH_92876 [Myceliophthora thermophila ATCC
42464]
gi|347008948|gb|AEO56435.1| hypothetical protein MYCTH_92876 [Myceliophthora thermophila ATCC
42464]
Length = 1055
Score = 162 bits (410), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 92/208 (44%), Positives = 126/208 (60%), Gaps = 39/208 (18%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA E+ R++ REG++LP + + FDSN ITPGTEFMA L
Sbjct: 59 MNQQRARRFRTALDA-------EKAREKAIREGKELPKE---EPFDSNCITPGTEFMAKL 108
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S L+Y+I+ +++ D W++ +++LS VPGEGEHKIM Y+R R P Y PN RHCLY
Sbjct: 109 SQQLKYFINKKVSEDRAWQQPEIVLSGHEVPGEGEHKIMEYIRNARAQPDYSPNVRHCLY 168
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+Q AK K+ E +
Sbjct: 169 GLDADLIMLGLLSHDPHFCLLREEV-TFGRQ-------------------AKHKSKELEH 208
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEF 208
+ + LH+ +REYL+ ++
Sbjct: 209 QN---------FYLLHLCIVREYLELDW 227
>gi|328719013|ref|XP_001945621.2| PREDICTED: 5'-3' exoribonuclease 1-like, partial [Acyrthosiphon
pisum]
Length = 1358
Score = 162 bits (410), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 73/168 (43%), Positives = 101/168 (60%), Gaps = 12/168 (7%)
Query: 437 KERYYEEKFNAKTPEEREETRKDVVLR-----YTEGLCWVMHYYYEGVCSWQWFYPYHYA 491
KE YY+ K + D V+R Y L W ++YYY G CSW W+YP+HYA
Sbjct: 99 KENYYKNKLDYNVI-------TDDVMRSQAEGYIRALQWNLNYYYNGCCSWAWYYPHHYA 151
Query: 492 PFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYP 551
P+ SD+K + I F+LG PF P+ QLL V PS S LP+ ++ LMT+ SPI +YP
Sbjct: 152 PYISDIKGFENLKIDFDLGQPFLPYEQLLAVLPSLSKELLPKPFQDLMTEEASPIRLYYP 211
Query: 552 TDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 599
FE D+NGK++ W+ + +PFIDE L+ +K +EH LT +E RN+
Sbjct: 212 EKFETDLNGKQHEWEAVVLIPFIDEETLIKSMKMVEHKLTADEKNRNT 259
>gi|328854884|gb|EGG04014.1| hypothetical protein MELLADRAFT_28527 [Melampsora larici-populina
98AG31]
Length = 206
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/152 (53%), Positives = 106/152 (69%), Gaps = 11/152 (7%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR +KD D + + ER+G LP ++ FDSN ITPGT FMA L
Sbjct: 65 MNQQRSRRFRTAKDRKD-------MIDKAERKGETLP---STEAFDSNCITPGTPFMARL 114
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S L+Y+I+ +++ D W+ ++V+ S +VPGEGEHKIM Y+RL + P Y+PN RHCLY
Sbjct: 115 SEQLKYFINQKVSTDSAWQGVQVVFSGHDVPGEGEHKIMEYIRLAKAQPDYNPNVRHCLY 174
Query: 121 GLDADLIMLALATHEVHFSILR-EVVFTPGQQ 151
GLDADLIMLAL +H+ HF +LR EV F P ++
Sbjct: 175 GLDADLIMLALLSHDPHFCLLREEVKFGPARK 206
>gi|291236957|ref|XP_002738405.1| PREDICTED: C. briggsae CBR-XRN-2 protein-like [Saccoglossus
kowalevskii]
Length = 1810
Score = 161 bits (408), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 71/151 (47%), Positives = 100/151 (66%), Gaps = 4/151 (2%)
Query: 464 YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVF 523
Y +GLCW+ YYY G SWQWFYPYHYAPFA D ++ FE+G P KP QL+ +
Sbjct: 324 YVKGLCWISMYYYHGCPSWQWFYPYHYAPFAMDFINITNLQNDFEVGEPLKPLEQLMAIL 383
Query: 524 PSASSHALPEHYRKLMTDP--NSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLD 581
++ H LP +R LMTD +SPISDFYP DFE D+NG++Y+ +G+A++PF+DE RL +
Sbjct: 384 TPSNDHLLPTTWRPLMTDELGDSPISDFYPDDFETDLNGEKYTSRGVARIPFVDETRLKE 443
Query: 582 EVKKIEHTLTEEEARRNSIMADMLFVLLSHP 612
++ + LT +E RN + +F+ +HP
Sbjct: 444 ALEGLH--LTRDEECRNRFGHNAVFLDATHP 472
Score = 149 bits (375), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 68/137 (49%), Positives = 90/137 (65%), Gaps = 3/137 (2%)
Query: 426 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 485
ED V+LG GWK+RYYE KF+ +P E ++ Y +GLCW+ YY+ G SWQWF
Sbjct: 1341 EDNVRLGMDGWKDRYYEYKFDV-SPSHEPEFINNLADSYVKGLCWISMYYFHGCPSWQWF 1399
Query: 486 YPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMT-DP-N 543
YPYHYAPFA D K++ FE+G P KP QL+ + P ++ H LP +R LM +P +
Sbjct: 1400 YPYHYAPFAMDFKNITHLQNDFEVGEPLKPLEQLMAILPPSNDHLLPITWRPLMIGEPGD 1459
Query: 544 SPISDFYPTDFEVDMNG 560
SPI DFYP DFE+D++G
Sbjct: 1460 SPIRDFYPGDFEIDLSG 1476
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/300 (33%), Positives = 145/300 (48%), Gaps = 67/300 (22%)
Query: 2 NQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLS 61
N +RSRRF + K+ S E + + E + + +D F+ N+I PGT+FM+ L
Sbjct: 83 NSRRSRRFLSDKEERMSDTELDLIWHE--KGFSESESSADELEFNRNLICPGTKFMSRLH 140
Query: 62 IALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYG 121
+ L YI ++N P W IKVILSDA VPGEGEHKIM VR Q+ P +D N+RHC+Y
Sbjct: 141 VHLHEYIANKINTQPSWVGIKVILSDATVPGEGEHKIMEIVRRQKATPTHDINSRHCIYS 200
Query: 122 LDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEK 181
D LATHE + SI+R+ + L C+ K
Sbjct: 201 ND------GLATHEPNLSIIRKEI----------------PLGDWCKDKV---------- 228
Query: 182 GDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEI-DLECIVDDFIFMCFFVGNDFLPH 240
PY F+ T + L+ E + + ++ +DD++F+C +GNDFLP
Sbjct: 229 ---------PYFFI---TKLQCLEKEMYVAGLGSGVHNINRTIDDWVFLCCLLGNDFLPK 276
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
+P+L I E A++ L+ +YK V H + +G ED IF++R R
Sbjct: 277 LPSLNINEKALDRLIRMYKTA------------------VTHTM--LGKEEDVIFRERRR 316
Score = 107 bits (268), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 117/283 (41%), Gaps = 110/283 (38%)
Query: 45 FDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRL 104
FD N + PGT+FM+ L + L+ YI R+ P W IKVILSDA+VPGEGEHKIM
Sbjct: 1121 FDYNSLCPGTDFMSRLHVHLRAYIADRIRTQPRWVGIKVILSDASVPGEGEHKIME---- 1176
Query: 105 QRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLA 164
I+R Q GH+
Sbjct: 1177 -----------------------------------IIR---------------SQRGHIV 1186
Query: 165 ANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVD 224
+CE A R+ E VV ++ F+H+ LR+ +D
Sbjct: 1187 RDCEN-APRQERE--------VVQEEKLIFVHLKVLRKR------------------TID 1219
Query: 225 DFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFR----------------ALGG- 267
D++F+C +GNDFLP +P+L I+EGA++ L+ +YK AL G
Sbjct: 1220 DWVFLCCLLGNDFLPKLPSLNIKEGALDRLVRMYKTAVTHTMINDLKSKIRELSLALDGK 1279
Query: 268 ------------YLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 298
YLTD +L ++ + +G ED IF++R
Sbjct: 1280 SEEIDPDDGDKRYLTDNGIVNLHMLQMILTELGKEEDVIFRER 1322
>gi|70926599|ref|XP_735814.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56509808|emb|CAH84865.1| hypothetical protein PC301271.00.0 [Plasmodium chabaudi chabaudi]
Length = 260
Score = 160 bits (406), Expect = 2e-36, Method: Composition-based stats.
Identities = 79/152 (51%), Positives = 108/152 (71%), Gaps = 2/152 (1%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRF++ + LR +F E R +P + + +DSN+ITPGT+FM L
Sbjct: 34 MNQQRSRRFKSILASEIEKRAYIELRNKFLSENRNVPDEYNH--WDSNIITPGTQFMHEL 91
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
SIAL+Y+I ++ ND W+KI VI SDANV GEGEHKI ++++ QR GYDPNTRH ++
Sbjct: 92 SIALKYFIEHKITNDEKWKKIVVIFSDANVCGEGEHKIYNFIKSQRAQKGYDPNTRHVIH 151
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQD 152
G+DADLIML+LA+HE +F ILRE++ ++D
Sbjct: 152 GMDADLIMLSLASHEPYFYILREIINLDQKED 183
>gi|336472444|gb|EGO60604.1| hypothetical protein NEUTE1DRAFT_127448 [Neurospora tetrasperma
FGSC 2508]
gi|350294329|gb|EGZ75414.1| 5'-3' exoribonuclease 1 [Neurospora tetrasperma FGSC 2509]
Length = 1226
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/209 (44%), Positives = 125/209 (59%), Gaps = 38/209 (18%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR +A + E+ R + REG++LP + + FDSN ITPGTEFMA L
Sbjct: 94 MNQQRARRFR-------TALDNEKARDKAIREGKELPKE---EPFDSNCITPGTEFMAKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S L+Y+IH +++ D W++ +++LS VPGEGEHKIM Y+R R YD N RHCLY
Sbjct: 144 SQQLRYFIHKKVSEDRDWQQPEIVLSGHEVPGEGEHKIMEYIRNARAQLDYDANVRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML L +H+ HF +LRE V T G+ G AK KA +E
Sbjct: 204 GLDADLIMLGLLSHDPHFCLLREEV-TFGR------------------GPAKHKAKGLEE 244
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFR 209
+ + +H+ +REYL+ EF+
Sbjct: 245 QN---------FYLMHLCIVREYLELEFQ 264
>gi|384483989|gb|EIE76169.1| hypothetical protein RO3G_00873 [Rhizopus delemar RA 99-880]
Length = 1163
Score = 160 bits (404), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 159/301 (52%), Gaps = 61/301 (20%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQ+RS++F+++K++ +RE P +D V+ PGT FMA L
Sbjct: 91 MNQERSKQFQSAKESL------------IKRE-----PLAD-------VVLPGTAFMAKL 126
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+Y + +++ D W ++VI+S +VPGE +HKI Y+RL ++ YDPNT+HC+Y
Sbjct: 127 TAQLRYLVAKKISEDIEWRDVEVIVSGPDVPGESKHKIAEYIRLCKSQADYDPNTKHCMY 186
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G+ DL++++LATHE +F+++ CE + A DE
Sbjct: 187 GIRDDLLLVSLATHEPNFALV-------------------------CEQDDAQNA---DE 218
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFL 238
+ K Y LH+ +RE L+ EF + PF+ D E I+DDF+ + ND L
Sbjct: 219 RK------KSQYFLLHLSLIRECLEREFSSLKSSLPFKYDFERILDDFVLLSLITSNDLL 272
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEH-FIQAVGSYEDRIFQK 297
P + L++ G +N+LM +YK+ Y+ +G + +L R+E F +A E ++F++
Sbjct: 273 PRLSGLQVNRGGLNILMKIYKEVLPTCDDYIQNGGQITLTRLEKIFARASTIVESKLFEE 332
Query: 298 R 298
+
Sbjct: 333 Q 333
Score = 119 bits (298), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 87/164 (53%), Gaps = 3/164 (1%)
Query: 436 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 495
WK YY+E + + + V Y + + +YY+G+ SW+WFYPYHYAP S
Sbjct: 500 WKAAYYKEMLDIDFFAS--DLLEHAVASYILSIQLINSFYYQGILSWRWFYPYHYAPKLS 557
Query: 496 DLKDLDQFN-ISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDF 554
DLKDL +F +F PF L+ V P +P Y+ LMTD SPIS FYPT F
Sbjct: 558 DLKDLGRFQGFNFPADQPFTLHEYLMAVLPPCHKRLVPVPYQGLMTDYKSPISLFYPTRF 617
Query: 555 EVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
D N + I K+PF+DE +LL+ ++ + L E E R N
Sbjct: 618 YTDFNKNDLDEECIPKIPFVDEKQLLEAIQSKQGLLREHELRSN 661
>gi|167521441|ref|XP_001745059.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776673|gb|EDQ90292.1| predicted protein [Monosiga brevicollis MX1]
Length = 235
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/147 (54%), Positives = 102/147 (69%), Gaps = 11/147 (7%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPP----KSDSQVFDSNVITPGTEF 56
MNQQR+RRFRA+++ ++ RQ+ + G L + + FDSN ITPGTEF
Sbjct: 96 MNQQRARRFRAAQEGREA-------RQDLQASGDNLSAFRQRRKERMPFDSNCITPGTEF 148
Query: 57 MAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTR 116
M+ LS ALQ+Y+ LRL+ DPGW ++VI SDA+VPGEGEHKI+ ++R RN P YDPN R
Sbjct: 149 MSRLSAALQHYVVLRLSEDPGWANLQVIFSDASVPGEGEHKILDFIRNARNGPNYDPNQR 208
Query: 117 HCLYGLDADLIMLALATHEVHFSILRE 143
H LYG DADLI+L LATHE +LRE
Sbjct: 209 HVLYGADADLILLGLATHEPAIYVLRE 235
>gi|260944868|ref|XP_002616732.1| hypothetical protein CLUG_03973 [Clavispora lusitaniae ATCC 42720]
gi|238850381|gb|EEQ39845.1| hypothetical protein CLUG_03973 [Clavispora lusitaniae ATCC 42720]
Length = 373
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 166/337 (49%), Gaps = 46/337 (13%)
Query: 219 LECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLR 278
LE +DD++FMCFFVGNDFLPH P+L +R+ I++L+ +K+ L Y+T K +
Sbjct: 38 LERAIDDWVFMCFFVGNDFLPHFPSLSVRDNGIDILVGCWKQVIPRLRDYITCDGKLNYE 97
Query: 279 RVEHFIQAVGSYEDRIFQKRARLHQRHAERIKREKA--------------QARRGDDVEP 324
VE + + + ED I +KR +R+A KR K +G + P
Sbjct: 98 GVEQLLAVLATKEDEILRKRHESERRYANNEKRRKVGQAEEKAMRAQFLPNVSKGRERAP 157
Query: 325 LAQPDSLVPVSRFHGSRL---ASGPSPSPYQQSECVGR--LDNGKGTSGRPHKVPRLSSG 379
+ D+ +P+ G+ + A + + + + + N + + +SG
Sbjct: 158 V-HADTNMPLMDTSGNLVEGYAQLSNKDIVHNRDVITKANMANEDAAAALRKLLEAKASG 216
Query: 380 ATIGA---AIVEAENS----------FETDPQENKEEFKAKLKELLR-DKSDAFNSDNPE 425
AT + + V +N ++ E+ + K++ E L+ + SD+ +
Sbjct: 217 ATGKSEETSDVSIKNEEESEFESQEPIDSIKGEDVDSVKSESMESLKTESSDSIKQADSA 276
Query: 426 E--------DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYE 477
E D V+ E G+++RYYE KF A +PEE + RK VV Y EG+ WV+ YYY+
Sbjct: 277 EPPSRKRALDDVRYLEAGYRDRYYEAKFGASSPEEVADIRKKVVRAYLEGISWVLLYYYQ 336
Query: 478 GVCSWQWFYPYHYAPFASDLKDLDQF----NISFELG 510
G SWQW++PYHYAPFA+D +L + I F+ G
Sbjct: 337 GCPSWQWYFPYHYAPFAADFTNLREIVGEEGIKFDFG 373
>gi|290992973|ref|XP_002679108.1| 5'-3' exoribonuclease 1 [Naegleria gruberi]
gi|284092723|gb|EFC46364.1| 5'-3' exoribonuclease 1 [Naegleria gruberi]
Length = 968
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/297 (34%), Positives = 157/297 (52%), Gaps = 23/297 (7%)
Query: 32 EGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIK-VILSDANV 90
E RK K D +FDS IT GT FM LS LQ++I +L +DP W I+ +I SD++V
Sbjct: 167 ENRK--KKEDESLFDSISITSGTSFMKELSEHLQFFIKRKLQDDPNWRNIENIIFSDSSV 224
Query: 91 PGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQ 150
GEGEHKIMS++R + +P + + +YG+D+DLI+L+L THE +LR+ + P
Sbjct: 225 FGEGEHKIMSHIRKVQQIPN-RKSEKFMIYGMDSDLILLSLVTHEEDIYVLRD--WMPSV 281
Query: 151 QDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLD-YEFR 209
D + N + K+ + D+ + + + I +R+ ++ Y +
Sbjct: 282 SDSFNQVYSRWKVRRNFKKKSNSSSRTVDKDRFD-----HKFHLVEISLVRKLIEKYMRQ 336
Query: 210 IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI--REGAINLLMAVYKKEFRAL-- 265
N E DL ++DDFI M F GNDF+ +PTL+I E A+ L VY+ F +
Sbjct: 337 DLNSSIEFDLNRVIDDFILMLFVCGNDFISSLPTLDIGKDENALGYLFKVYRTLFSTVFK 396
Query: 266 GGYLTDGSKPS----LRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARR 318
G Y+T+ S PS L R+E F+Q +G E R+ R + + + I +K+ R
Sbjct: 397 GCYITNSSNPSELINLERLETFMQVIGRLEVRVLTNRLK---KELQLINEKKSIEER 450
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 48/99 (48%), Gaps = 15/99 (15%)
Query: 436 WKERYYEEKFNAKT--------PEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYP 487
WK YY K N P+ RE +V Y + + W +YYY GV SW++ Y
Sbjct: 720 WKVNYYSRKLNITYDSSSKGGGPQVRE-----LVKEYLKAMYWTFYYYYFGVPSWEYSYN 774
Query: 488 YHYAPFASDLKDLDQF--NISFELGHPFKPFNQLLGVFP 524
+HYAP ASD +L + I+F G P P LL V P
Sbjct: 775 FHYAPAASDFVNLKELFTEITFHKGLPLNPIESLLAVIP 813
>gi|449019218|dbj|BAM82620.1| deoxyribonuclease [Cyanidioschyzon merolae strain 10D]
Length = 1527
Score = 156 bits (394), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 96/174 (55%), Gaps = 4/174 (2%)
Query: 436 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 495
+K RYY EK + R+ + Y E + W + YY GV SW+WFYPYHYAPF S
Sbjct: 502 YKRRYYHEKLGIDYDHDAAAVRR-ICRSYLEAIVWTLEYYLNGVASWRWFYPYHYAPFCS 560
Query: 496 DLKDLDQF--NISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTD 553
D+ L I E G PF P QLL V P S+ LP Y KLMTD +SP++D YP+
Sbjct: 561 DMVGLQALAQEIRLEQGTPFLPLQQLLAVLPPRSAWCLPPAYAKLMTDTSSPLADLYPSQ 620
Query: 554 FEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKI-EHTLTEEEARRNSIMADMLF 606
+DM GKR W+GI LPF+DE RL + + LT E RN + + +L
Sbjct: 621 VAIDMQGKRNEWEGIVLLPFMDENRLFAALASVPPDALTPTEQERNHLGSCILL 674
>gi|399216467|emb|CCF73155.1| unnamed protein product [Babesia microti strain RI]
Length = 1209
Score = 155 bits (393), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 100/262 (38%), Positives = 136/262 (51%), Gaps = 34/262 (12%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPK-SDSQVFDSNVITPGTEFMAV 59
MNQQR+RRFR+ ++ A E + F G P + D VFD ITPGT+FM
Sbjct: 108 MNQQRTRRFRSVAESEQRANLNEECAKYFA-NGYDDPVRGKDGFVFDPTCITPGTKFMHE 166
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
+ ++ Y+ + D W K+KVI+S ANVPGEGEHKI Y+ RN G + HC+
Sbjct: 167 FTTQIEKYVAKMIKADTYWSKLKVIVSGANVPGEGEHKIAEYI---RNTKGQSIKS-HCI 222
Query: 120 YGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEF 178
YGLDADLIML+L HE H +LRE ++FT ++ P
Sbjct: 223 YGLDADLIMLSLLFHEPHICLLRESIIFTNMMKNNITYRLLP------------------ 264
Query: 179 DEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFL 238
K D V+ LHI LREYL E + E + +DDFI +C VGNDFL
Sbjct: 265 --KDDNFVL-------LHIRVLREYLARELLPVHMLKEPFISRAIDDFILICLLVGNDFL 315
Query: 239 PHMPTLEIREGAINLLMAVYKK 260
PH+ ++I + +LM +Y++
Sbjct: 316 PHLKFVQIPNRGLTILMKLYRE 337
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 80/154 (51%), Gaps = 18/154 (11%)
Query: 436 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 495
W RYY AK E++R+++V +Y G+ WV++YYY V W W+ P Y P A
Sbjct: 418 WASRYYY----AKMGLTDEQSREEIVKQYLIGIQWVLYYYYRCVPDWNWYLPCPYPPLAQ 473
Query: 496 DLKDL--------------DQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTD 541
D+ + I FELGHP PF QLL V P SS+ LP+ L+TD
Sbjct: 474 DMSKILKRTIQKTECKRLSKALGIKFELGHPCTPFEQLLSVLPPKSSYLLPKQLEALITD 533
Query: 542 PNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFID 575
P S + ++PT F+VDM+ W G+ LP ID
Sbjct: 534 PKSGLESYFPTQFDVDMDDTLVPWGGVTLLPTID 567
>gi|219111223|ref|XP_002177363.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411898|gb|EEC51826.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]
Length = 156
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/145 (52%), Positives = 98/145 (67%), Gaps = 12/145 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
+NQQRSRRFR++ D A++ + L+ E + +VFDSN ITPGTEF+A +
Sbjct: 21 LNQQRSRRFRSAMDMAEATKD---LKDE---------KGNQREVFDSNCITPGTEFLAKV 68
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S +QY+I ++ DP W + VI S +VPGEGEHKIM ++R R P Y PNTRHC+Y
Sbjct: 69 SNTIQYFIRKKIKEDPSWHGLTVIFSGHDVPGEGEHKIMQHIREMRAQPNYAPNTRHCIY 128
Query: 121 GLDADLIMLALATHEVHFSILREVV 145
G DADLIML L THE HF+ILREV+
Sbjct: 129 GQDADLIMLGLVTHEPHFTILREVI 153
>gi|71415930|ref|XP_810014.1| 5'-3' exonuclease XRNA [Trypanosoma cruzi strain CL Brener]
gi|70874484|gb|EAN88163.1| 5'-3' exonuclease XRNA, putative [Trypanosoma cruzi]
Length = 266
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/154 (50%), Positives = 103/154 (66%), Gaps = 10/154 (6%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RR+R S E RQE +G ++P + D VFDSN ITPGT FM +
Sbjct: 94 MNQQRQRRYR-------SGYELMVARQEAIAQGEEVPDEKD--VFDSNCITPGTNFMVRV 144
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S QY+I +++ DP W+ +V+ S + PGEGEHKI+ ++R ++ PGY PN HC+Y
Sbjct: 145 SEQFQYFITMKIATDPAWQNCQVVYSGHDNPGEGEHKIVDFIRRRKMQPGYSPNETHCMY 204
Query: 121 GLDADLIMLALATHEVHFSILREVV-FTPGQQDK 153
GLDADL+ML+LATHE HF +LREVV F PGQ+ +
Sbjct: 205 GLDADLVMLSLATHEPHFLLLREVVTFGPGQESR 238
>gi|429327281|gb|AFZ79041.1| 5'-3' exoribonuclease 2, putative [Babesia equi]
Length = 1356
Score = 153 bits (387), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 147/288 (51%), Gaps = 52/288 (18%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
+NQQR RRFRAS + + + + G + P +D FD ITPGT FM L
Sbjct: 123 INQQRERRFRASAEMENQILVMNSIDIQ---NGVEEKPNTDEYKFDPLQITPGTPFMERL 179
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPN------ 114
++ LQ++ + + W+ ++V++S ++VPGEGEHKIM Y+R + ++ N
Sbjct: 180 TLHLQFFAQKMIAENKSWKNLQVVVSGSDVPGEGEHKIMEYIRNDKARRHFEANNSSEDV 239
Query: 115 -----TRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEG 169
T HC+YGLDADLI+L+L THE +LRE V + GQ +
Sbjct: 240 KECKYTSHCIYGLDADLIILSLITHEPFVCLLRERV----------MFGQ-------MKN 282
Query: 170 KAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLEC---IVDDF 226
K + +++ Y LHI LREY+ + I NP D++ +VDDF
Sbjct: 283 STKMR----------MMINMSNYVLLHIGILREYILNDL-IENPKLRKDVKIMDRVVDDF 331
Query: 227 IFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSK 274
+ + FVGNDFLPH+ I EG ++ ++ +YK GY+T+ K
Sbjct: 332 VLITLFVGNDFLPHLLLANIPEGGLDAVLGIYK-------GYITESIK 372
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 76/172 (44%), Gaps = 26/172 (15%)
Query: 436 WKERYYEEKFNAKTPEEREETRKDV---VLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAP 492
WK RYY K K V V Y G+ W+++YYY V SW W + Y P
Sbjct: 459 WKSRYYFAKLGISDQIGDGTLFKSVSTLVSGYFVGIQWILYYYYRSVPSWSWSLSFKYPP 518
Query: 493 FASDL----------------------KDLDQ-FNISFELGHPFKPFNQLLGVFPSASSH 529
F D+ L Q ++ F++ P P QL+ + P +S+
Sbjct: 519 FVHDMLLFLKNARVEYIRKQRHNMSMYSTLSQVMDMKFDISSPITPLEQLMMILPPKASY 578
Query: 530 ALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLD 581
LP+ K+M DP SP+S +Y T EVDM+ W GIA LP + LL+
Sbjct: 579 LLPDVLGKIMNDPKSPLSRYYLTKIEVDMDNTNVKWGGIALLPAVPHGPLLE 630
>gi|145506154|ref|XP_001439043.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406216|emb|CAK71646.1| unnamed protein product [Paramecium tetraurelia]
Length = 1199
Score = 152 bits (385), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 150/298 (50%), Gaps = 38/298 (12%)
Query: 2 NQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLS 61
NQQR RRF +SK A +++Q ++L + + F +N IT GTEFM L+
Sbjct: 97 NQQRQRRFASSKGDA-------KIKQLL----KQLDLEQQNHTFKNNQITAGTEFMYELN 145
Query: 62 IALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYG 121
++++I+ + D + ++VI S ++VPGEGEHKI+ ++R +N ++P+ HC+Y
Sbjct: 146 EQVKFFINRKFKEDEKYANLQVIFSGSDVPGEGEHKILEFMRGIKNQQNFNPDWTHCIYS 205
Query: 122 LDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEK 181
DADLIML L H + SI+RE Q + KR
Sbjct: 206 ADADLIMLGLGIHLKYVSIIRE---------------QSNMDQIKTQIACKRS------- 243
Query: 182 GDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHM 241
+ ++ +++ ++EYLD E++ +++ ++DDF+ + F +GNDFLP +
Sbjct: 244 -----IETVKFELINLQIVKEYLDLEYKTIQMKIPYNIDRVIDDFLLLFFLIGNDFLPRV 298
Query: 242 PTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
+I++G + LL+ +K Y+T + + + +Q + +E + +KR
Sbjct: 299 YCFDIKQGTVELLIDTFKSFLEQCDEYVTQDGWINWKSMSLLVQVLSKFEIKAIEKRV 356
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 127/254 (50%), Gaps = 42/254 (16%)
Query: 384 AAIVEAENSFETDPQENK-EEFKAKLKELLRDKSDAFNSDNPE--------EDKVKLGEP 434
+ +V+ + FE E + EE K ++K+ +DNPE E ++K+ +
Sbjct: 338 SLLVQVLSKFEIKAIEKRVEELKKQIKD----------TDNPEYQDYKIQWESELKILDA 387
Query: 435 -----------GWKERYYEEK--FNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCS 481
++ +YE K + T E ++E K ++L+Y EG +V+ YYY GV S
Sbjct: 388 LNIQFSNNNSVVARKLFYESKCQIDIDTEEGKKELDK-IILKYLEGFQFVLSYYYHGVPS 446
Query: 482 WQWFYPYHYAPFASDLKDLDQFN----ISFELGHPFKPFNQLLGVFPSASSHALPEHYRK 537
W+W+Y Y+Y+P DL N I F P+ PF QLL + P +++ LP +R
Sbjct: 447 WEWYYSYYYSPMCFDLCVYLSKNQIEKIQFGQSKPYDPFQQLLLILPPHNANLLPAPFRG 506
Query: 538 LMTDPNSPIS---DFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHT-LTEE 593
L D SP+ D+YP ++E+D G + Q I K+PF++ L+ E KKI+ + L E
Sbjct: 507 LY-DLESPLRKPFDYYPDEYEIDPFGAIWEHQFICKVPFMNSDLLISEYKKIDQSQLNEL 565
Query: 594 EARRNSIMADMLFV 607
E R+ LFV
Sbjct: 566 ERERSKFGHAYLFV 579
>gi|303285348|ref|XP_003061964.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456375|gb|EEH53676.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 252
Score = 152 bits (384), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 81/145 (55%), Positives = 97/145 (66%), Gaps = 10/145 (6%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRFR SA E ++ ++E +G P+ + FDSN ITPGT FMA L
Sbjct: 94 MNQQRSRRFR-------SALEAKKAKEEAIAKGE---PEPSGEPFDSNCITPGTPFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S L++Y+ + DP W+K VILS V GEGEHKIM ++R R PG+DPN HCLY
Sbjct: 144 SEHLRFYVMKKQTEDPQWQKATVILSGHEVRGEGEHKIMEHIRWARGEPGWDPNQTHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVV 145
GLDADLIMLAL THE HF +LREVV
Sbjct: 204 GLDADLIMLALVTHEPHFCLLREVV 228
>gi|167516040|ref|XP_001742361.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778985|gb|EDQ92599.1| predicted protein [Monosiga brevicollis MX1]
Length = 290
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/143 (52%), Positives = 96/143 (67%), Gaps = 11/143 (7%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
M QQR RRF+A++D+ + ++ + P + FDSN ITPGTEFM +L
Sbjct: 95 MQQQRQRRFKATRDSEAA-----------QQITAVVAPPMPEEHFDSNCITPGTEFMDLL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L Y+I +L D W K++V+LS VPGEGEHKIM ++R ++ P YDPNTRHCL+
Sbjct: 144 QRHLVYFIQRKLEEDDDWRKVEVVLSGHQVPGEGEHKIMDFIRSLKSQPAYDPNTRHCLH 203
Query: 121 GLDADLIMLALATHEVHFSILRE 143
GLDADLIMLALATHE HF+ILRE
Sbjct: 204 GLDADLIMLALATHEPHFAILRE 226
>gi|84995660|ref|XP_952552.1| 5'-3' exoribonuclease 2 [Theileria annulata strain Ankara]
gi|65302713|emb|CAI74820.1| 5'-3' exoribonuclease 2, putative [Theileria annulata]
Length = 1467
Score = 150 bits (380), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/286 (35%), Positives = 146/286 (51%), Gaps = 50/286 (17%)
Query: 3 QQRSRRFRASKDAADSAAEEERLR-QEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLS 61
QQR RRFRA+ ++ + L+ E E L K + FD ITPGT FM L+
Sbjct: 125 QQRERRFRAAMESTQQQIILDSLKDMENGEESADLNEKEEEFKFDPIQITPGTAFMERLT 184
Query: 62 IALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNL--PGYD------- 112
LQ++ +N + W +K+++S ++VPGEGEHKIM Y+R + + Y+
Sbjct: 185 SRLQFFALKMINENQQWRNLKIVVSGSDVPGEGEHKIMEYIRNDKAIRHAEYEKMIRNGN 244
Query: 113 ------PNTRHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAA 165
P HC+YGLDADLI+L+LATHE + +LRE VVF GH+
Sbjct: 245 KEKKGVPYVSHCVYGLDADLIVLSLATHEPYICLLREQVVF--------------GHMKN 290
Query: 166 NCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLEC---I 222
+ + + ++V Y LHI LREYL + + + DL +
Sbjct: 291 SSKMR--------------MMVNMNNYILLHIGILREYLVADL-VEDLRLRSDLNVMDRV 335
Query: 223 VDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEF-RALGG 267
VDDF+F+ FVGNDFLPH+ I EG N ++ +Y++ +LGG
Sbjct: 336 VDDFVFLTMFVGNDFLPHIHMANIPEGGFNHMLQIYREYLVESLGG 381
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 95/200 (47%), Gaps = 32/200 (16%)
Query: 414 DKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNA-----KTPEEREETRKDVVLRYTEGL 468
D SD FN+ P E + + ++ RYY K K E + +DVV Y G+
Sbjct: 492 DLSD-FNAKYPNEPQTLVD---YRNRYYLAKMGISNQLIKCNEGSVNSVEDVVREYLHGV 547
Query: 469 CWVMHYYYEGVCSWQWFYPYHYAPFASDL-------------KDLDQFN----------I 505
W+++YYY GV SW W P Y PF +D+ D QF+ I
Sbjct: 548 QWILYYYYRGVPSWNWHLPCKYPPFVNDMLLFLKNTKRKLTMTDKAQFSYPLLLSDVLHI 607
Query: 506 SFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSW 565
SF G P PF QL+ V P S+H LP + +L+TD SP+ +YP F+VDM+ W
Sbjct: 608 SFVKGKPITPFEQLMLVLPPQSAHFLPSVFSRLITDQESPLHQYYPLHFDVDMDNTNVPW 667
Query: 566 QGIAKLPFIDEARLLDEVKK 585
GI +P + LL ++ K
Sbjct: 668 GGITLIPLVPYPLLLQQMNK 687
>gi|355729461|gb|AES09875.1| 5'-3' exoribonuclease 1 [Mustela putorius furo]
Length = 190
Score = 150 bits (380), Expect = 3e-33, Method: Composition-based stats.
Identities = 64/121 (52%), Positives = 87/121 (71%)
Query: 478 GVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRK 537
GV SW W+YPYHYAPF SD++++ I FELG PFKPF QLL V P+AS + LP Y+
Sbjct: 1 GVQSWSWYYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQH 60
Query: 538 LMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARR 597
LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +R
Sbjct: 61 LMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKR 120
Query: 598 N 598
N
Sbjct: 121 N 121
>gi|312075567|ref|XP_003140474.1| single-stranded RNA 5'-3' exonuclease [Loa loa]
gi|307764361|gb|EFO23595.1| single-stranded RNA 5'-3' exonuclease [Loa loa]
Length = 258
Score = 150 bits (378), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 72/145 (49%), Positives = 99/145 (68%), Gaps = 10/145 (6%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRF ++K+A ++ + + G K+P D + FDSN ITPGT FMA L
Sbjct: 94 MNQQRARRFMSAKNAQEAMNKARK-------NGVKIP---DEKPFDSNCITPGTHFMARL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
LQY++ +++ D W+ +++ LS N PGEGEHKIM ++R +R+ YD NTRHCLY
Sbjct: 144 HEQLQYFVQMKITTDSCWQGLRIYLSGHNCPGEGEHKIMDFIRSERSRSDYDANTRHCLY 203
Query: 121 GLDADLIMLALATHEVHFSILREVV 145
GLDADLIML + +HE HF++LRE V
Sbjct: 204 GLDADLIMLGICSHEPHFALLREEV 228
>gi|71416427|ref|XP_810246.1| 5'-3' exonuclease XRNA [Trypanosoma cruzi strain CL Brener]
gi|70874749|gb|EAN88395.1| 5'-3' exonuclease XRNA, putative [Trypanosoma cruzi]
Length = 230
Score = 149 bits (375), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 74/145 (51%), Positives = 97/145 (66%), Gaps = 9/145 (6%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RR+R S E RQE +G ++P + D VFDSN ITPGT FM +
Sbjct: 94 MNQQRQRRYR-------SGYELMVARQEAIAQGEEVPDEKD--VFDSNCITPGTNFMVRV 144
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S QY+I +++ DP W+ +V+ S + PGEGEHKI+ ++R ++ PGY PN HC+Y
Sbjct: 145 SEQFQYFITMKIATDPAWQNCQVVYSGHDNPGEGEHKIVDFIRRRKMQPGYSPNETHCMY 204
Query: 121 GLDADLIMLALATHEVHFSILREVV 145
GLDADL+ML+LATHE HF +LREVV
Sbjct: 205 GLDADLVMLSLATHEPHFLLLREVV 229
>gi|341882472|gb|EGT38407.1| hypothetical protein CAEBREN_28761, partial [Caenorhabditis
brenneri]
Length = 274
Score = 145 bits (367), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/208 (41%), Positives = 117/208 (56%), Gaps = 31/208 (14%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRF +++ A + +L + E+ G +P + + FDSN ITPGT FM L
Sbjct: 94 MNQQRARRFMSARTA------QTQLDKAIEK-GEVIPTE---KRFDSNCITPGTYFMTRL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L +I + +D W+ K+ILS NVPGEGEHKIM Y+R +R YDPNTRHC+Y
Sbjct: 144 HDQLDEWIKKKSESDSHWQGRKIILSGHNVPGEGEHKIMDYIRTERAKSDYDPNTRHCMY 203
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
GLDADLIML + +HE HFS+LRE V N + + + +
Sbjct: 204 GLDADLIMLGIVSHEPHFSLLREEV------------------TFNTRPRKNEQKNKKPK 245
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEF 208
+ D V K + LH+ LREYL +EF
Sbjct: 246 RTDSDV---KTFHLLHLSLLREYLAWEF 270
>gi|188501630|gb|ACD54753.1| 5-3 exoribonuclease 2 isoform 9-like protein [Adineta vaga]
Length = 510
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 113/173 (65%), Gaps = 2/173 (1%)
Query: 436 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 495
W+ +YY++KF K + + ++ +VV Y EGLCWV+HYYY+GV SW W+Y Y+Y P AS
Sbjct: 331 WQRQYYKDKFGFKGDQLKTKS-TEVVQHYAEGLCWVLHYYYKGVPSWDWYYSYYYPPLAS 389
Query: 496 DLKDLDQFNISFEL-GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDF 554
+L+ ++F P KP +L +FPS + LP+++++L++D S I DFY +D
Sbjct: 390 TFSNLENIPMNFNRNSKPLKPLEHMLAIFPSKYARYLPKNWQELISDMKSSIIDFYRSDP 449
Query: 555 EVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
+D +GKRY Q I KLPF+DE L + +K I+ TL++EE +RN + D LF+
Sbjct: 450 AIDAHGKRYEEQYIVKLPFVDEKCLFEALKSIDSTLSKEEEKRNRLDDDHLFI 502
Score = 135 bits (341), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 139/293 (47%), Gaps = 58/293 (19%)
Query: 40 SDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIM 99
SD++ F I PGT FM+ LS L+ YIH R+N+ P W+ I VILSDANVPGEGEHK M
Sbjct: 73 SDNEQFTKCDIKPGTMFMSKLSDKLRSYIHDRMNSIPAWKSIIVILSDANVPGEGEHKTM 132
Query: 100 SYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQ 159
++R Q+ + NT H L+ D+D+++L L + I+R
Sbjct: 133 DFIRSQK---FSNSNTNHVLFSGDSDMVLLGLTMPSDNVRIMR----------------- 172
Query: 160 PGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDL 219
RK + + Y F + LRE + EF DL
Sbjct: 173 -------------RKTNKIE-----------VYTFRDLKLLREEIKNEFI-------GDL 201
Query: 220 ECIVDDFIFMCFFVGNDFLPHMPTLEIREGAI-NLLMAVYKKEFRALGGYLTDGSKPSLR 278
+ I+DD+IF+C GNDFLP++P++E + I N++ YK+ R YL + +P+L
Sbjct: 202 KSIIDDWIFLCLLAGNDFLPNLPSIEFNQTEINNVIFDTYKEYIRKKDVYLIENMEPNLE 261
Query: 279 RVEHFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSL 331
+ ++ +G E+ K L +R + R+ EP+ P ++
Sbjct: 262 YFKILLKHIGEIEE---DKVMSLLERSQTATNYSLDEIRKQ---EPITNPSAI 308
>gi|145515211|ref|XP_001443505.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410894|emb|CAK76108.1| unnamed protein product [Paramecium tetraurelia]
Length = 1303
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/281 (33%), Positives = 142/281 (50%), Gaps = 41/281 (14%)
Query: 42 SQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSY 101
++ + +N +PGTEFM L+ +++YI + + DP ++ +K+I S +VPGEGEHK++S+
Sbjct: 125 NETYKNNQFSPGTEFMTQLNQQIKFYIERKYSEDPKFKNLKIIFSGCDVPGEGEHKLLSF 184
Query: 102 VRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPG 161
+ RNL DPN+ H +YG DADLIML L T + I+RE D F Q
Sbjct: 185 I---RNLQC-DPNSVHMIYGADADLIMLGLLTQLKNVLIIRE--------DLKF--KQTA 230
Query: 162 HLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEI--DL 219
AAN VV + ++I +REYLD EF + ++ D+
Sbjct: 231 SAAAN------------------RVVKIPEFLVINISIVREYLDLEFAVLKDKMKVPYDI 272
Query: 220 ECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRR 279
I+DDFI +CFFVGNDFLP + +IR G I L+ ++K YL + +
Sbjct: 273 NRIIDDFILLCFFVGNDFLPRIFCFDIRIGTIEPLVDLFKNHLTNANDYLVHRGDINYKE 332
Query: 280 VEHFIQAVGSYEDRIFQKRAR-----LHQRHAER--IKREK 313
+ + + +E R + L+ +H R I +EK
Sbjct: 333 LISLLDLLQGFEKLCINDRQQEMLNYLNTKHQNRQVIAKEK 373
Score = 99.4 bits (246), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 85/158 (53%), Gaps = 16/158 (10%)
Query: 440 YYEEKFNAKTPEEREETRK-DVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDL- 497
YY+ K +E + + D+ + Y EG+ +V+ YY++GV SW+W+Y Y+YAP DL
Sbjct: 395 YYKAKCQITKDDELDLDKLGDMCVNYMEGIYFVLQYYFKGVPSWEWYYKYYYAPLCGDLV 454
Query: 498 ----KDLDQFN-----ISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPI-- 546
+ Q I G P+ PF QLL + ++ LPE Y +L+TD + I
Sbjct: 455 GVVSNMVKQLQDKEEPILLTKGEPYPPFKQLLSILTPENAQLLPEPYGRLLTDKENSILR 514
Query: 547 --SDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDE 582
D+YP +FE D G Y Q I K+PF+D ++++E
Sbjct: 515 TPIDYYPENFETDSYGTMYEHQHITKIPFLD-CKIVEE 551
>gi|428182412|gb|EKX51273.1| hypothetical protein GUITHDRAFT_157234 [Guillardia theta CCMP2712]
Length = 252
Score = 144 bits (362), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 75/144 (52%), Positives = 97/144 (67%), Gaps = 11/144 (7%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFRA+ + + S L ER G ++P FDSN ITPGT+FMA L
Sbjct: 94 MNQQRQRRFRAASELSKS------LMNARER-GEEIP----QDPFDSNCITPGTQFMARL 142
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L Y+I ++ +DP W K K+ILS A VPGEGEHKIM Y+R +++ + N RHC++
Sbjct: 143 TNFLNYFIQSKIKDDPIWAKAKIILSGAEVPGEGEHKIMEYIRREKSQESWPSNLRHCIF 202
Query: 121 GLDADLIMLALATHEVHFSILREV 144
G DADLIML+LATHE HF++LRE
Sbjct: 203 GNDADLIMLSLATHEPHFALLRET 226
>gi|401828471|ref|XP_003887949.1| 5'-3' exonuclease [Encephalitozoon hellem ATCC 50504]
gi|392998957|gb|AFM98968.1| 5'-3' exonuclease [Encephalitozoon hellem ATCC 50504]
Length = 656
Score = 142 bits (358), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/282 (32%), Positives = 139/282 (49%), Gaps = 25/282 (8%)
Query: 32 EGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVP 91
E L +++ FD N ITPGT FM L L YI +L++DPG +++I S VP
Sbjct: 152 ESSSLAVDVEAEKFDLNCITPGTPFMERLHSVLISYIQYKLSSDPGASHLRIIYSSYLVP 211
Query: 92 GEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQ 151
GEGE KIMS++R Q + N H +Y D DL+ L L+ H I+R+ F+P +
Sbjct: 212 GEGEQKIMSFIRNQESAAR---NDVHMIYSPDGDLMFLGLSLHRSKVLIMRD-YFSPNRA 267
Query: 152 DK---CFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEF 208
K C CG+ GH C V + +++I LR L EF
Sbjct: 268 QKKKVCTKCGRTGHSNEECG-----------------VFTNYHFVYVNISELRTRLIREF 310
Query: 209 RIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGY 268
R E I++D+IF+CF +GNDF+P +P L+IR +I + + K F Y
Sbjct: 311 RRYTAQ-RFSEERILNDWIFLCFLLGNDFVPSIPCLDIRFHSIETITEIMMKNFSETKSY 369
Query: 269 LTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 310
+T S + +++F + S ED ++ ++++ R E +K
Sbjct: 370 ITCNSAIDYQVLKNFYTILASKEDSLYYRKSQSLDRFREELK 411
Score = 117 bits (293), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 102/224 (45%), Gaps = 18/224 (8%)
Query: 384 AAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEE 443
+ E+S ++ + F+ +LK++ N +K+ + K +YY
Sbjct: 386 TILASKEDSLYYRKSQSLDRFREELKDM----------PNITYEKIPIHTKTGKIQYYAS 435
Query: 444 KFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQF 503
K NA T E + V Y +GL WV YY G W W+YPYH+AP A+DL L
Sbjct: 436 KLNASTESEI----RSVCYEYVKGLYWVYSYYILGSTGWDWYYPYHFAPLAADLSKLSIS 491
Query: 504 NISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRY 563
I G P +P QLL V P S +P+ + + + DFYP D + DM K +
Sbjct: 492 EIRINPGLPLRPLEQLLAVLPPMSKSMVPKALQPIFNE----YKDFYPEDVKTDMFDKVF 547
Query: 564 SWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
WQ + LPF+D +L E ++L E+ RN D+ F
Sbjct: 548 LWQEVVILPFVDFRSILSENASKFNSLEYEDLNRNLRSLDLFFT 591
>gi|70933012|ref|XP_737941.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56513750|emb|CAH81056.1| hypothetical protein PC000391.04.0 [Plasmodium chabaudi chabaudi]
Length = 314
Score = 142 bits (358), Expect = 1e-30, Method: Composition-based stats.
Identities = 64/108 (59%), Positives = 86/108 (79%)
Query: 45 FDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRL 104
+DSN+ITPGT+FM LSIAL+Y+I ++ ND W+KI VI SDANV GEGEHKI ++++
Sbjct: 6 WDSNIITPGTQFMHELSIALKYFIEHKITNDEKWKKIVVIFSDANVCGEGEHKIYNFIKS 65
Query: 105 QRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQD 152
QR GYDPNTRH ++G+DADLIML+LA+HE +F ILRE++ ++D
Sbjct: 66 QRAQKGYDPNTRHVIHGMDADLIMLSLASHEPYFYILREIINLDQKED 113
Score = 77.8 bits (190), Expect = 3e-11, Method: Composition-based stats.
Identities = 43/129 (33%), Positives = 66/129 (51%), Gaps = 9/129 (6%)
Query: 193 QFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAIN 252
Q L + LREYL +F + +LE +DDFIF+CF GNDFLPH+P++ I G+I+
Sbjct: 187 QILDLTILREYLYKDFFFDT---KYNLERCIDDFIFICFLCGNDFLPHLPSISIASGSID 243
Query: 253 LLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAER---- 308
L+ +Y+K LG YL + + + +I + E F + ++ +R
Sbjct: 244 QLILLYQKVLPVLGDYLINEGSMNFQAFTKYISFIAEVERETFVSQYDFKKKREKRELQK 303
Query: 309 --IKREKAQ 315
KR K Q
Sbjct: 304 DAFKRPKCQ 312
>gi|343959368|dbj|BAK63541.1| 5'-3' exoribonuclease 2 [Pan troglodytes]
Length = 370
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/222 (41%), Positives = 123/222 (55%), Gaps = 16/222 (7%)
Query: 507 FELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSW 565
FE G PFKP QL+GVFP+AS + LP +RKLM+DP+S I DFYP DF +D+NGK+Y+W
Sbjct: 5 FEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAW 64
Query: 566 QGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCK 625
QG+A LPF+DE RL ++++ LT EE RRNS+ D+LFV HPL I L
Sbjct: 65 QGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFVGKHHPLHDFILEL----Y 120
Query: 626 QLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPP-VFRSPVASMEDIMGNQVLCAIYK 684
Q E V+V PEL G+ G S P + SPV + D+ N V+ +K
Sbjct: 121 QTGSTEPVDVP----PELCHGIQGKFSLDEEAILPDQIVCSPVPMLRDLTQNTVVSINFK 176
Query: 685 LPD-AHKHVTRPPAGVIFPKKIVQLEDLKPAPVLWHEDSGRR 725
P A ++ + V+ P LKP+ W + S R
Sbjct: 177 DPQFAEDYIFK---AVMLPGARKPAAVLKPSD--WEKSSNGR 213
>gi|70925173|ref|XP_735320.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56508876|emb|CAH84746.1| hypothetical protein PC301213.00.0 [Plasmodium chabaudi chabaudi]
Length = 241
Score = 140 bits (353), Expect = 4e-30, Method: Composition-based stats.
Identities = 78/184 (42%), Positives = 109/184 (59%), Gaps = 9/184 (4%)
Query: 387 VEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLG---EPG-WKERYYE 442
+ E S E + EF LKE ++ ++ +NP+ED V+LG +P + RYY
Sbjct: 62 ISEEESPEMKKLNDIIEFNLLLKEAIKKANEC---ENPKED-VELGADDDPNDLRARYYR 117
Query: 443 EKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQ 502
KF+ + +E K+VV +Y EGL WV+ YY++ W W+YPY+YAP +SDL +
Sbjct: 118 SKFHLDETDNVDEFVKEVVYKYIEGLAWVLCYYFQACPMWHWYYPYYYAPLSSDLL-IKD 176
Query: 503 FNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKR 562
+ISFE P PF QLL V PS SSH LP+ YR+LM SPI DFYP F+ + NGK+
Sbjct: 177 ISISFEEDEPLLPFEQLLCVLPSNSSHCLPKMYRELMLKNESPIVDFYPKTFKEEENGKK 236
Query: 563 YSWQ 566
+ +Q
Sbjct: 237 FKYQ 240
>gi|403221749|dbj|BAM39881.1| 5'-3' exoribonuclease 2 [Theileria orientalis strain Shintoku]
Length = 1374
Score = 140 bits (353), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/318 (32%), Positives = 152/318 (47%), Gaps = 89/318 (27%)
Query: 3 QQRSRRFRASKDAADSAAEEERLR----QEFEREGRKLPPKSDSQVFDSNVITPGTEFMA 58
QQR RRFR++ +A E L Q+ + +G + + + FD ITPGT FM
Sbjct: 125 QQRERRFRSASEATIQQLILESLTELGDQDEDTQGEE--TQKEEFKFDPIQITPGTAFME 182
Query: 59 VLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVR-------------LQ 105
L+ LQ++ +N + W +K+++S + VPGEGEHKIM Y+R +
Sbjct: 183 RLTTRLQFFALKMINENELWRNLKIVVSGSEVPGEGEHKIMEYIRNDKARRHAEFESEVH 242
Query: 106 RNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLA 164
R PG P+ HC+YGLDADLI+L+LATHE + +LRE VVF GH+
Sbjct: 243 RREPGDTPHISHCVYGLDADLIVLSLATHEPYICLLREQVVF--------------GHM- 287
Query: 165 ANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVD 224
K + + + Y+ ++ +VD
Sbjct: 288 ------------------------KNSSKLRMMVNMNSYI--------------MDRVVD 309
Query: 225 DFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSK--PSLRRVEH 282
DF+F+ FFVGNDFLPH+ I EG +N L+ +Y++ YL + K PS
Sbjct: 310 DFVFLTFFVGNDFLPHLLLANIPEGGLNELLQIYRE-------YLDESFKSGPS------ 356
Query: 283 FIQAVGSYEDRIFQKRAR 300
AVG++++ + Q+ AR
Sbjct: 357 -STAVGNHQNTLPQRNAR 373
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%)
Query: 503 FNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKR 562
+I F+ G P P+ QL+ V P S+H LP + L+T+ SP+ +YP F+VDM+ +
Sbjct: 529 LDIKFDKGKPITPYEQLMLVLPRQSAHFLPSVFSALITEQESPLHQYYPIHFDVDMDNTK 588
Query: 563 YSWQGIAKLPFIDEARLL 580
W GI LP + + +L
Sbjct: 589 VPWGGITLLPSVPYSLML 606
>gi|396082120|gb|AFN83732.1| 5-3 exoribonuclease [Encephalitozoon romaleae SJ-2008]
Length = 656
Score = 139 bits (349), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 140/282 (49%), Gaps = 25/282 (8%)
Query: 32 EGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVP 91
E L +++ FD N ITPGT FM L L YI +L+NDPG +K+I S VP
Sbjct: 152 ESSSLAVDVETENFDLNCITPGTPFMERLHNVLISYIQYKLSNDPGVSHLKIIYSSYLVP 211
Query: 92 GEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQ- 150
GEGE KIMS++R Q ++ N H +Y D DL+ L L+ H I+R+ F+P +
Sbjct: 212 GEGEQKIMSFIRSQESVAR---NDVHMIYSPDGDLMFLGLSLHRSKVLIMRD-YFSPNKA 267
Query: 151 --QDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEF 208
+ C C + GH C V + +++I LR L EF
Sbjct: 268 RMKKTCAKCKRSGHSDEECG-----------------VFTNYHFVYVNISELRIRLIREF 310
Query: 209 RIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGY 268
R + E I++D+IF+CF +GNDF+P P L+IR +I + + K F Y
Sbjct: 311 RRYTTQ-RFNEERILNDWIFLCFLLGNDFVPPTPCLDIRFHSIETITEIMAKNFSVTKSY 369
Query: 269 LTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 310
+T S + + +++F + + ED ++ ++++ + E +K
Sbjct: 370 ITCSSTINFQALKNFCTILAAKEDGLYHRKSQSLDKFREGLK 411
Score = 117 bits (292), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 89/186 (47%), Gaps = 8/186 (4%)
Query: 423 NPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSW 482
N +K+ + K +YY K NA T E K+V Y +GL WV YY G W
Sbjct: 415 NITYEKIPIHTKTGKIQYYASKLNANT----ESDIKNVCYEYIKGLYWVYSYYILGSTGW 470
Query: 483 QWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDP 542
W+YPYH+AP A DL + I G P +P QLL V P S +P+ + + D
Sbjct: 471 DWYYPYHFAPLAVDLSKISISEIRINPGLPLRPLEQLLAVLPPMSKGMVPKVLQPIFND- 529
Query: 543 NSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMA 602
D YP D + DM K Y WQ + LPF+D +L E ++L E+ RN
Sbjct: 530 ---YKDCYPEDVKTDMFDKVYLWQEVVLLPFVDFRSILSENASRFNSLGYEDLSRNLRSL 586
Query: 603 DMLFVL 608
D+LF +
Sbjct: 587 DLLFTV 592
>gi|145552342|ref|XP_001461847.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429683|emb|CAK94474.1| unnamed protein product [Paramecium tetraurelia]
Length = 351
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 125/231 (54%), Gaps = 34/231 (14%)
Query: 42 SQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSY 101
++ + +N +PGTEFM L+ +++YI + + DP ++ +K+I S +VPGEGEHK++S+
Sbjct: 113 NETYKNNQFSPGTEFMTQLNQQIKFYIERKYSEDPKFKNLKIIFSGCDVPGEGEHKLLSF 172
Query: 102 VRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPG 161
+R + +DPN+ H +YG DADLIML L T + I+RE D F Q
Sbjct: 173 IRNMQ----FDPNSVHMIYGADADLIMLGLLTQLKNVLIIRE--------DLKF--KQTA 218
Query: 162 HLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEI--DL 219
AAN V+ + ++I +REYLD EF + ++ D+
Sbjct: 219 SAAAN------------------RVIKIPEFLVINISIVREYLDLEFAVLKDKMKVAYDI 260
Query: 220 ECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLT 270
I+DDFI +CFFVGNDFLP + +IR G I L+ ++KK Y+
Sbjct: 261 HRIIDDFILLCFFVGNDFLPRIYCFDIRIGTIEPLVDLFKKHLTNANDYIV 311
>gi|432111908|gb|ELK34946.1| 5'-3' exoribonuclease 1 [Myotis davidii]
Length = 1223
Score = 137 bits (345), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/159 (44%), Positives = 96/159 (60%), Gaps = 4/159 (2%)
Query: 442 EEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYE--GVCSWQWFYPYHYAPFASDLKD 499
EE +K E E D L TE + YY GV +YPYHYAPF SD+++
Sbjct: 220 EEAVTSKDHLEDETEEDD--LFETEFRQYKRTYYMTKMGVDIVSEYYPYHYAPFLSDIRN 277
Query: 500 LDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMN 559
+ I FELG PF PF QLL V P+AS + LP Y+ LMT +SPI ++YP DF+ D+N
Sbjct: 278 ISTLKIHFELGKPFMPFEQLLAVLPAASKNLLPTCYQHLMTSEDSPIIEYYPPDFKTDLN 337
Query: 560 GKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
GK+ W+ + +PFIDE RLL+ ++ H+L +EE +RN
Sbjct: 338 GKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 376
Score = 43.1 bits (100), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 22/87 (25%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPG
Sbjct: 94 MNQQRGRRFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGY------ 137
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSD 87
I Y++L P +EK V LSD
Sbjct: 138 -INENGYLNL-----PRFEKYLVKLSD 158
>gi|303390661|ref|XP_003073561.1| 5-3 exoribonuclease [Encephalitozoon intestinalis ATCC 50506]
gi|303302708|gb|ADM12201.1| 5-3 exoribonuclease [Encephalitozoon intestinalis ATCC 50506]
Length = 656
Score = 137 bits (345), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/282 (32%), Positives = 142/282 (50%), Gaps = 25/282 (8%)
Query: 32 EGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVP 91
E L +++ FD N ITPGT FM L L YI +L+ DP +++I S VP
Sbjct: 152 ESSSLAMDVEAEKFDLNCITPGTPFMERLHNVLISYIQYKLSKDPEVSHLRIIYSSYLVP 211
Query: 92 GEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQ 151
GEGE KIMS++R Q +P N H +Y D DLI L L+ ++ I+R+ F+P +
Sbjct: 212 GEGEQKIMSFIRNQ--IPA-AKNDVHMIYSPDGDLIFLGLSLYKSRVLIMRD-YFSPSKA 267
Query: 152 DK---CFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEF 208
K C CG+ GH C G FD + +++I LR L EF
Sbjct: 268 RKKKICTKCGRTGHSNDEC--------GVFDNYH---------FVYVNIAELRSRLIREF 310
Query: 209 RIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGY 268
R + + E ++ D+IF+CF +GNDF+P +P L+IR +I+ L + K F Y
Sbjct: 311 R-KHTTQRFNEERLLSDWIFLCFLLGNDFVPSIPCLDIRFHSIDTLTEIMMKNFSETKSY 369
Query: 269 LTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 310
+T + + + + +F + ED ++ ++++ R E +K
Sbjct: 370 ITCNTSINYQVLRNFYTILARKEDGLYHRKSQSLDRLREELK 411
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 96/202 (47%), Gaps = 14/202 (6%)
Query: 407 KLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTE 466
+L+E L+D N +K+ + K +YY K NAKT + K++ Y +
Sbjct: 405 RLREELKDMP------NIIYEKIPIHTKTGKIQYYTSKLNAKTDSDI----KNICYEYIK 454
Query: 467 GLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSA 526
L WV YY G W W+YP+H+AP A+DL L I G P +P QLL V P
Sbjct: 455 ALYWVYSYYILGYTGWDWYYPHHFAPLAADLSKLSISEIRINSGLPLRPLEQLLVVLPPM 514
Query: 527 SSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKI 586
S +P + + + D+YP D E DM K Y WQ + LPF+D +L E
Sbjct: 515 SKGMVPRELQPIFNN----YKDYYPEDVETDMFDKVYLWQEVVLLPFMDFRSILSENASR 570
Query: 587 EHTLTEEEARRNSIMADMLFVL 608
++L E+ RN D+ F +
Sbjct: 571 FNSLGYEDLSRNLRSLDLFFTV 592
>gi|449330168|gb|AGE96430.1| ribonucleic trafficking protein 1 [Encephalitozoon cuniculi]
Length = 655
Score = 136 bits (343), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 140/282 (49%), Gaps = 25/282 (8%)
Query: 32 EGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVP 91
E L +++ FD N ITPGT FM L L YI +L++DP +++I S VP
Sbjct: 152 ESSSLAIDVETEKFDLNCITPGTPFMERLHKVLISYIQCKLSSDPEVSNLRIIYSSYLVP 211
Query: 92 GEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQ 151
GEGE KIMS++R Q ++ N H +Y D DLI L L+ I+R+ F+P ++
Sbjct: 212 GEGEQKIMSFIRSQGSIAR---NDVHMIYSPDGDLIFLGLSLQRNRVLIMRD-YFSPSKE 267
Query: 152 DK---CFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEF 208
+ C CG+ GH C V + +++I LR L EF
Sbjct: 268 RRKRTCTKCGRTGHSDEECG-----------------VFTNYHFVYVNISELRTRLIREF 310
Query: 209 RIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGY 268
R + E I+DD+IF+CF +GNDF+P +P L+IR +I + + K F + Y
Sbjct: 311 R-RHTAQRFSEERILDDWIFLCFLLGNDFVPPIPCLDIRFHSIETITEIMMKSFSEMKSY 369
Query: 269 LTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 310
+T + + + +F + S ED ++ ++++ + E +K
Sbjct: 370 ITCNKMINYQALRNFYAILASKEDALYHRKSQSLDKFREGLK 411
Score = 123 bits (309), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 91/180 (50%), Gaps = 8/180 (4%)
Query: 427 DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFY 486
+K+ + K +YY K NA T E K++ Y +GL WV YY G W W+Y
Sbjct: 419 EKIPIHTKTGKVQYYTSKLNATT----ESDIKNICYEYVKGLYWVYSYYVLGWTGWDWYY 474
Query: 487 PYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPI 546
PYH+AP A+DL L +I GHP +P QLL V P S +PE + + D
Sbjct: 475 PYHFAPLAADLSKLSINDIQISPGHPLRPLEQLLVVLPPMSRGMVPEGLQPIFDD----Y 530
Query: 547 SDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 606
D+YP D + DM K Y WQ I LPF+D +L E +TL E+ RN D+LF
Sbjct: 531 KDYYPEDVKTDMFDKVYLWQEIVLLPFMDFRPILSENAVKFNTLGYEDLSRNLRSLDLLF 590
>gi|85014269|ref|XP_955630.1| 5-3 exoribonuclease [Encephalitozoon cuniculi GB-M1]
gi|19171324|emb|CAD27049.1| RIBONUCLEIC TRAFFICKING PROTEIN 1 (5'3'exoribonuclease)
[Encephalitozoon cuniculi GB-M1]
Length = 655
Score = 135 bits (341), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 140/282 (49%), Gaps = 25/282 (8%)
Query: 32 EGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVP 91
E L +++ FD N ITPGT FM L L YI +L++DP +++I S VP
Sbjct: 152 ESSSLAIDVETEKFDLNCITPGTPFMERLHKVLISYIQCKLSSDPEVSNLRIIYSSYLVP 211
Query: 92 GEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQ 151
GEGE KIMS++R Q ++ N H +Y D DLI L L+ I+R+ F+P ++
Sbjct: 212 GEGEQKIMSFIRSQGSIAR---NDVHMIYSPDGDLIFLGLSLQRNRVLIMRD-YFSPSKE 267
Query: 152 DK---CFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEF 208
+ C CG+ GH C V + +++I LR L EF
Sbjct: 268 RRKRTCTKCGRTGHSDEECG-----------------VFTNYHFVYVNISELRTRLIREF 310
Query: 209 RIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGY 268
R + E I+DD+IF+CF +GNDF+P +P L+IR +I + + K F + Y
Sbjct: 311 R-RHTAQRFSEERILDDWIFLCFLLGNDFVPPIPCLDIRFHSIETITEIMMKSFSEMKSY 369
Query: 269 LTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 310
+T + + + +F + S ED ++ ++++ + E +K
Sbjct: 370 ITCNKMINYQALRNFYAILASKEDGLYHRKSQSLDKFREGLK 411
Score = 123 bits (309), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 91/180 (50%), Gaps = 8/180 (4%)
Query: 427 DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFY 486
+K+ + K +YY K NA T E K++ Y +GL WV YY G W W+Y
Sbjct: 419 EKIPIHTKTGKVQYYTSKLNATT----ESDIKNICYEYVKGLYWVYSYYVLGWTGWDWYY 474
Query: 487 PYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPI 546
PYH+AP A+DL L +I GHP +P QLL V P S +PE + + D
Sbjct: 475 PYHFAPLAADLSKLSINDIQISPGHPLRPLEQLLVVLPPMSRGMVPEGLQPIFDD----Y 530
Query: 547 SDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 606
D+YP D + DM K Y WQ I LPF+D +L E +TL E+ RN D+LF
Sbjct: 531 KDYYPEDVKTDMFDKVYLWQEIVLLPFMDFRPILSENAVKFNTLGYEDLSRNLRSLDLLF 590
>gi|323456482|gb|EGB12349.1| hypothetical protein AURANDRAFT_20690, partial [Aureococcus
anophagefferens]
Length = 186
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/143 (53%), Positives = 100/143 (69%), Gaps = 1/143 (0%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RR+ A+++ A++AA E+ LR E G+ P K ++ +D NVITPGTEFM L
Sbjct: 35 MNQQRTRRYVAAQERAEAAAAEDALRDELAATGQPAPEKKAAK-WDHNVITPGTEFMRKL 93
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+ Y R + P W+ I +LSDA VPGEGEHKI+SYVR R GYDP T+HC+
Sbjct: 94 ADFLRAYCARRARSHPRWKHISFLLSDATVPGEGEHKIISYVRALRQQEGYDPATQHCIV 153
Query: 121 GLDADLIMLALATHEVHFSILRE 143
G DADLIML+LA HE +F +LR+
Sbjct: 154 GEDADLIMLSLALHEENFLVLRK 176
>gi|296085877|emb|CBI31201.3| unnamed protein product [Vitis vinifera]
Length = 85
Score = 134 bits (337), Expect = 2e-28, Method: Composition-based stats.
Identities = 62/80 (77%), Positives = 68/80 (85%), Gaps = 1/80 (1%)
Query: 189 KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGND-FLPHMPTLEIR 247
KKPY+FL+IWTLREYL+YE RIPN PF ID E +VDDFIFMCFFVGND FLP M L I
Sbjct: 3 KKPYRFLNIWTLREYLEYEMRIPNLPFGIDFEHLVDDFIFMCFFVGNDFFLPRMLALVIC 62
Query: 248 EGAINLLMAVYKKEFRALGG 267
EGAINLLMAVYKKE +A+GG
Sbjct: 63 EGAINLLMAVYKKELKAMGG 82
>gi|118373913|ref|XP_001020149.1| XRN 5'-3' exonuclease N-terminus family protein [Tetrahymena
thermophila]
gi|89301916|gb|EAR99904.1| XRN 5'-3' exonuclease N-terminus family protein [Tetrahymena
thermophila SB210]
Length = 874
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 169/670 (25%), Positives = 277/670 (41%), Gaps = 119/670 (17%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRF A + ++E + F+ + +P +N I PGT FM L
Sbjct: 139 MNQQRQRRFHA--EMHHLTLKDELKKHGFDVKEETVP---------NNSIAPGTPFMYEL 187
Query: 61 SIALQYYIHLRL---------------NNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQ 105
+ L+ YI R+ + ++K++ ILSD+N PGEGEHKI+
Sbjct: 188 NEQLRRYIETRIALSNKAMTDGEADHKEHQVSYKKLQFILSDSNAPGEGEHKILELT--- 244
Query: 106 RNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAA 165
HC+ G DADL++L+LAT ILRE G DK L + L
Sbjct: 245 -----------HCIVGADADLLLLSLATIGKRILILRENSKFKG--DKTDLEKELQKLKE 291
Query: 166 -----NCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLE 220
+ +R+ D G + V+ K Y+ + + L Y NP
Sbjct: 292 ELSHPQLDLHKEREYDLVDINGLKRVILDK-YKKMFDNKQVQNLKY-----NPM------ 339
Query: 221 CIVDDFIFMCFFVGNDFLPHMPTLEIRE------GAINLLMAVYKKEFRALGGYLTDGSK 274
++DDF+F+ F GNDFLP ++I+ ++ L+ Y YL+D
Sbjct: 340 SLMDDFVFLSLFAGNDFLPRQNYMQIKSEKGHKPNILDKLIEKYDSYLETATSYLSDRGF 399
Query: 275 PSLRRVEHFIQAVGSYE-----DRIFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPD 329
++ F + V + E +RIF+ + + + +K ++ ++VE + D
Sbjct: 400 IKYNQIIEFFKQVATIEPKFKNNRIFEAPQKEEKSVFDYVKI--MSQKQINNVEDIKDQD 457
Query: 330 SLVPVSRFHGSRLASGPSPSPYQQSEC------VGRLDNGKGTSGRPHKVPRLSSGATIG 383
L+ F L + S +++E + D + + H
Sbjct: 458 -LIDYD-FKEEDLKLQQTSSVNEETEIPKDIIPISDSDEDQEEQKQSHDKEYHKKNKKEQ 515
Query: 384 AAIVEAENSFETDPQ--ENKEEFKAKLKELLRDKSDAFNSDNPEED---KVKLGEPGWKE 438
N + D Q E+ + K K+ N ++ EED K+ E KE
Sbjct: 516 KK---HHNQHDKDNQLASGTEDEQKKQKQ---------NQEDDEEDEIQKILSDEMNGKE 563
Query: 439 RYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGV--CSWQWFYPYHYAPFASD 496
Y +EK +E + ++++Y EG + + YY+ G+ SW +FYP++YAP D
Sbjct: 564 IYLKEKLKVTNQQEYDL----IIMKYLEGFEFTLLYYFRGIEKASWNYFYPHYYAPLTQD 619
Query: 497 LKDLDQ----FNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPT 552
+ + + F + F PF+P+ QLL + + LP ++ L P F P
Sbjct: 620 VVEFLERNPKFEVKFVKTQPFQPYKQLLAILHPDNEALLPAEFKGLFKKYLQP---FCPQ 676
Query: 553 DFEVDMNGKRYSWQGIAKLPFIDEARLLDEV-----KKIEHTLTEEEARRNSIMADMLFV 607
++D G I KLPFID +L++ K +E + E + RN D +F
Sbjct: 677 ILDIDKYGATMEHMQIIKLPFID-VNVLEQAYQEGEKALEKSKNEYDKNRNIRSQDFIF- 734
Query: 608 LLSHPLSASI 617
+ L++SI
Sbjct: 735 --EYDLNSSI 742
>gi|123469088|ref|XP_001317758.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
gi|121900500|gb|EAY05535.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
Length = 1020
Score = 134 bits (337), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/318 (33%), Positives = 147/318 (46%), Gaps = 75/318 (23%)
Query: 2 NQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLS 61
QQRSRRF A++D+ +A F++ I+ GT FM L
Sbjct: 93 TQQRSRRFVAARDSVGAA-------------------------FNTTAISVGTTFMEDLH 127
Query: 62 IALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYG 121
L Y ++N+D W ++I S PGEGEHK +Y+R R YDPN+ HC+Y
Sbjct: 128 QHLLEYFKRKVNSDRAWSTPQLIYSSHRTPGEGEHKFFNYIREIRKTADYDPNSTHCIYS 187
Query: 122 LDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGK-AKRKAGEFDE 180
DADLI LAL + E + I+RE G P N GK AK K G D
Sbjct: 188 PDADLIFLALQSKEKYIYIMREWDAWVG----------PNENVGN--GKLAKLKTGADD- 234
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
++ LH+ L+EYL Y+F P P L +VDDF F +GNDF+PH
Sbjct: 235 -----------FELLHLPILKEYLSYDF--PGIP----LSNLVDDFAGFSFLIGNDFIPH 277
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYL-TDG--SKPSLRRVEHFIQAVGSYEDRIFQK 297
P + I+ G + ++ Y+K YL DG +KP+L +IF
Sbjct: 278 FPDVIIQHGDFDQVVIAYQKSLLETKQYLIVDGKFNKPAL---------------QIFL- 321
Query: 298 RARLHQRHAERIKREKAQ 315
R+ +HQ + K+EKA+
Sbjct: 322 RSVVHQLKNKSKKQEKAE 339
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 108/227 (47%), Gaps = 20/227 (8%)
Query: 385 AIVEAENSFETDPQENKEEFKAKLKEL---LRDKSDAFNSDNPEEDKVKLGEPGWKERYY 441
+++E + D + NK + L+ + L++KS + E+DK Y
Sbjct: 298 SLLETKQYLIVDGKFNKPALQIFLRSVVHQLKNKSK--KQEKAEQDKQMQNYLKTARTYI 355
Query: 442 EEKFNAKTPEERE---ETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLK 498
EK+ PEE + E K + + WV+ YY EG SW W + Y YAP L
Sbjct: 356 SEKY----PEETKRDPEFEKKLSFSVLDSFDWVLEYYTEGCPSWTWCFQYFYAP---PLI 408
Query: 499 DLDQFNIS----FELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDF 554
+ ++ + FEL P PF QLL + P S++ LP LM P SPIS +YPT F
Sbjct: 409 IVSEYVLEHSSHFELSRPPLPFEQLLCILPPQSANLLPSALSSLMFSP-SPISSYYPTSF 467
Query: 555 EVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIM 601
+D+NG+ +G+ +PF+D ++ + V L E RN+I+
Sbjct: 468 SIDLNGRAVEHEGVVLIPFVDVEKVRELVSSNLSKLGPNETERNTII 514
>gi|440299483|gb|ELP92037.1| 5'->3' exoribonuclease, putative [Entamoeba invadens IP1]
Length = 661
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 150/296 (50%), Gaps = 27/296 (9%)
Query: 15 AADSAAEEERLRQEFEREGRKLPPKSDSQV-FDSNVITPGTEFMAVLSIALQYYIHLRLN 73
A D ++ Q+ R+ R + + +S FDSN ITPGT FM LS+AL Y+ R++
Sbjct: 93 AVDGVCPFAKIVQQ--RKRRYISARGNSGTSFDSNCITPGTPFMERLSVALHAYVTNRMD 150
Query: 74 NDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALAT 133
+ W + VILS+ NVPGEGEHKI ++R + + N +HC+YG+DADLIML LA+
Sbjct: 151 TNLYWSSLSVILSNPNVPGEGEHKIFDFLRKESKNTDF-ANLKHCVYGMDADLIMLTLAS 209
Query: 134 HEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPY 192
+ I+R E+ FT +P + C + ++ G V +
Sbjct: 210 NLPFVYIIREEMEFT-----------KPNIICDVCHLNHRT-----NQHGKPVNLILCDP 253
Query: 193 QFLHIWTLREYL-DYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAI 251
L W + E E ++ +I +++DF+ + F VGNDFLP +P+L+++ G +
Sbjct: 254 NVLSTWLITECAKTCEMKME----DISRVELINDFVLITFLVGNDFLPKIPSLKVQSGGM 309
Query: 252 NLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAE 307
+++ Y F+ G LT+G +L ++ + + E + + R ++ E
Sbjct: 310 EIILKYYWPLFKE-GKRLTNGININLHLLKEMFAKITTEESELLKMVVRTTKKSQE 364
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 109/221 (49%), Gaps = 8/221 (3%)
Query: 427 DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFY 486
D + + G+ RYY+ F E K +V Y EGL WV YY GV SW+WFY
Sbjct: 378 DTIMIHTQGYHTRYYDTHFGK--ANNTENFYKQIVGEYIEGLFWVFQYYTVGVPSWRWFY 435
Query: 487 PYHYAPFASDL---KDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPN 543
P HYAPFA D+ DL+Q + FE P P QL+ V P S + +P L+
Sbjct: 436 PEHYAPFAEDIYKYIDLNQEGL-FEPDEPILPMEQLISVLPPQSFNNIPSTLASLVVSKQ 494
Query: 544 SPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMAD 603
SPI +++ T F D+NG+ ++G+ +L FID +++ + V + L E RRNS +
Sbjct: 495 SPILNYFNTTFRTDINGEAKLFKGVPQLDFIDLSKIEELVAERMAELKGREMRRNSRYGE 554
Query: 604 MLFVLLSHPLSASI--YTLDEHCKQLKIKERVEVKERLNPE 642
L + + I LD K + ++V K NPE
Sbjct: 555 NLLYFTTEGEYSEIMPLFLDIQVKNFETIQKVNEKIESNPE 595
>gi|67596043|ref|XP_666049.1| pacman protein [Cryptosporidium hominis TU502]
gi|54656955|gb|EAL35817.1| pacman protein [Cryptosporidium hominis]
Length = 734
Score = 134 bits (336), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 97/175 (55%), Gaps = 12/175 (6%)
Query: 455 ETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA-------SDLKDLDQFNIS- 506
E V + Y GL WV+ YYY GV SW W+YPYHYAP+ SD+K+ ++ S
Sbjct: 112 EISDQVCIHYLRGLSWVLGYYYHGVPSWDWYYPYHYAPYVMDIVELLSDVKNENKIKESL 171
Query: 507 ---FELGHPFKPFNQLLGVFPSASSH-ALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKR 562
F LG PF F QL+ V P S LP+ + +M D N+P+S+FYP+ F+ D NG +
Sbjct: 172 IGEFNLGKPFTQFEQLMSVLPPKSGKICLPKEFYNMMIDKNNPLSEFYPSKFKQDPNGNK 231
Query: 563 YSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASI 617
W+ +A LPFID+ LL+ V +E+ + RN + D+L+ PL I
Sbjct: 232 QRWKWVALLPFIDQKVLLETVIPLENEMDVLSKYRNKLGCDILYSFKFSPLKNII 286
>gi|300706190|ref|XP_002995390.1| hypothetical protein NCER_101741 [Nosema ceranae BRL01]
gi|239604457|gb|EEQ81719.1| hypothetical protein NCER_101741 [Nosema ceranae BRL01]
Length = 616
Score = 132 bits (333), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 158/321 (49%), Gaps = 37/321 (11%)
Query: 1 MNQQRSRRFRASKDAA------DSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGT 54
+ QR RR++A+ + A D ++ E QE + PP ++ +FDSN ITPGT
Sbjct: 89 LAHQRGRRYKAASEKAGPNGYIDFSSNVEITTQEGALTSK--PPTAN--IFDSNSITPGT 144
Query: 55 EFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPN 114
E M L + + LN +P ++ +K++ S VPGEGE KIM+++R + +L +P
Sbjct: 145 ELMKFLHKNIIDMLIYNLNTNPNYKDLKILYSSYLVPGEGEQKIMAFLR-KYHLS--NPK 201
Query: 115 TRHCLYGLDADLIMLALATHEVHFSILREVVF-TPGQQDKCFLCGQPGHLAANCEGKAKR 173
H +Y D D+I L ++ ++V+ I+RE F + +++ C +C + GH + C
Sbjct: 202 DTHVMYSPDGDIIFLGVSLYDVNLYIMREDTFNSKNKKEICRMCSRMGHFSEQCNRPDLL 261
Query: 174 KAGEFDEKGDEVVVPKKPYQFLHIWTLR-EYLDYEFRIPNPPFEIDLECIVDDFIFMCFF 232
D VPK L I+ ++ EY++ ++ D++ +CF
Sbjct: 262 IYSYID-------VPKFRASLLKIFNIKIEYVEKR--------------MLTDWVLVCFL 300
Query: 233 VGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSK-PSLRRVEHFIQAVGSYE 291
+GNDFLP +P ++I+ G+I L + F Y+T K + + +E F + + E
Sbjct: 301 LGNDFLPGIPCVDIKIGSIENLTSTLCDNFTNCKDYITTEDKNINFKILECFFVLLSTRE 360
Query: 292 DRIFQKRARLHQRHAERIKRE 312
+ + + ++ R I+ E
Sbjct: 361 NDWYNNKTKMLNRSCNFIREE 381
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 95/195 (48%), Gaps = 9/195 (4%)
Query: 414 DKSDAFN-SDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVM 472
+K+ N S N ++++L P +++YY KF A E ++ Y G+ W
Sbjct: 366 NKTKMLNRSCNFIREEIQLNTPQGRQKYYNSKFGAHC----EADFNNISQEYITGILWTF 421
Query: 473 HYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALP 532
+YY G SW W YPYH+APF DL ++ + + + G PF QL+ V P S + +
Sbjct: 422 NYYIGGKTSWDWVYPYHFAPFVRDLVNVVRAHYDLKKGCVLTPFEQLMVVIPPQSKNLVT 481
Query: 533 EHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTE 592
E R + + D YP + DM K W G+ LP + +L+ VK + ++
Sbjct: 482 EKLRYIFDE----YKDLYPLTIKFDMFDKYLLWTGVVLLPPFNSQVVLNAVKGKINEISA 537
Query: 593 EEARRNSIMADMLFV 607
E RN+ +++LFV
Sbjct: 538 SELDRNTEESELLFV 552
>gi|356556078|ref|XP_003546354.1| PREDICTED: 5'-3' exoribonuclease 3-like [Glycine max]
Length = 86
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/86 (73%), Positives = 72/86 (83%), Gaps = 1/86 (1%)
Query: 647 MNGYISPCAGDPHPPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIV 706
MNGYIS G+P PP+FRS +ASMEDIM N V+CAIY+LPDAHKH++RPP GV F KKIV
Sbjct: 1 MNGYISLYGGEPCPPIFRSLIASMEDIMDNHVICAIYRLPDAHKHISRPPQGVKFLKKIV 60
Query: 707 QLEDLKPAPVLWHEDSGRRPH-ENGR 731
++ DLKP PVLWHEDSGRR H ENGR
Sbjct: 61 EIGDLKPEPVLWHEDSGRRHHSENGR 86
>gi|156098318|ref|XP_001615191.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148804065|gb|EDL45464.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 587
Score = 130 bits (327), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 151/353 (42%), Gaps = 78/353 (22%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRF + +D++ + + +F+ N IT GT+FM +
Sbjct: 89 MNQQRKRRFLSLFKVSDNS--------------------NSAHLFNPNCITTGTDFMYKI 128
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
++AL + + G VI S ++VPGEGEHKI+ ++R G N HC+Y
Sbjct: 129 NLALNKWFQIL--KKKGIFPFDVIFSGSDVPGEGEHKILKFIREHCKRDGAFRNYSHCIY 186
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFL---------CGQPGHLAAN----- 166
GLDADLIML+L TH ILR+ L GQPG A N
Sbjct: 187 GLDADLIMLSLVTHLNSIFILRDKYKMANDSHAALLENLEKAQRGVGQPGGDAENTNHGG 246
Query: 167 -----CEGKAKRKAGEFDEKGDEV-------------------------VVPKKPYQF-- 194
+G + + D D + P Y F
Sbjct: 247 NEENPIQGGNAEEPIQSDTAEDTIQPHTAEDAAPPFCRVHRYTQDHYANCEPLNSYDFEI 306
Query: 195 LHIWTLRE--------YLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI 246
L ++ LR Y++ + N F I +VDD +F+ F VGNDFLPH+P ++I
Sbjct: 307 LDVYKLRNSIRTQIATYINKLKKEKNVVFNISR--VVDDIVFLSFLVGNDFLPHIPNVDI 364
Query: 247 REGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
EG++N ++ Y G Y+T K ++R++ ++ + + E F KR
Sbjct: 365 NEGSMNEILNAYIFYIYKYGNYITLKDKVHIQRLKIILKILSAQEFSYFLKRG 417
Score = 114 bits (285), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 83/143 (58%), Gaps = 6/143 (4%)
Query: 433 EPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAP 492
E +K YY +KF + P++ + +V +Y EGL W +HYY+ G SW W YPYHYAP
Sbjct: 428 ERTYKGYYYLQKFGVEDPQQIQL----IVNKYIEGLFWNLHYYHFGCASWCWEYPYHYAP 483
Query: 493 FASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPT 552
SDL ++ + FE G P+ + L+ V P ++ LPE Y+ + ++ + F+P
Sbjct: 484 LCSDLLSFEKSDFFFEKGKPYSAYTHLISVLPQKDNNLLPEAYKNIYSE--DEVKSFFPE 541
Query: 553 DFEVDMNGKRYSWQGIAKLPFID 575
+ +D NGK+ +W+ I LPFI+
Sbjct: 542 NVRIDPNGKKETWEYIVHLPFIN 564
>gi|223993125|ref|XP_002286246.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977561|gb|EED95887.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 182
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 91/159 (57%), Gaps = 25/159 (15%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKS------------DSQVFDSN 48
+NQQRSRR+R+ + +E E L P S ++ F SN
Sbjct: 35 LNQQRSRRYRSGSE------------KEIEMHLMTLQPISINSDESAELSQDENHGFHSN 82
Query: 49 VITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNL 108
ITPGT F+ S + +I +L DP W + +I S +VPGEGEHKIM ++R ++N
Sbjct: 83 CITPGTPFLYKCSQRILEFIRHKLQTDPKWHDLTIIFSGHDVPGEGEHKIMDFMRHEKNK 142
Query: 109 PGYDPNTRHCLYGLDADLIMLALATHEVHFSILR-EVVF 146
PGYDPN RHC+YG D DL+ML LATHE H +LR EVVF
Sbjct: 143 PGYDPNLRHCIYGQDGDLVMLGLATHEPHLCLLREEVVF 181
>gi|429964640|gb|ELA46638.1| hypothetical protein VCUG_01864 [Vavraia culicis 'floridensis']
Length = 707
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 127/264 (48%), Gaps = 25/264 (9%)
Query: 40 SDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIM 99
++ + FD N ITPGT FM L + +I RL NDP ++ + I S+ GEGE KIM
Sbjct: 233 TEDEAFDKNAITPGTRFMYDLEKRMDQFIRNRLVNDPKYKNLCFIYSNGRRAGEGEQKIM 292
Query: 100 SYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQ-QDKCFLC 157
+ +R +N N +H +Y DADLI L + H + I+RE + F Q Q C C
Sbjct: 293 TLIRKMKN-----RNLKHTIYSPDADLIFLGTSLHGRNVKIMREDLEFVHLQRQHYCEKC 347
Query: 158 GQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEI 217
G+ GHL+ C A FD + ++ ++ +H YEF
Sbjct: 348 GKKGHLSTYCNKLALFSCIFFDLIVLKRILSEELSMLVHT-------SYEFNR------- 393
Query: 218 DLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSL 277
+VDD+I M F GNDFLP + ++R AI +L + + F Y+T +
Sbjct: 394 ----MVDDWILMSFLAGNDFLPTLQCFDVRFEAIEILTKLLAENFNQTKKYITYKGEIDF 449
Query: 278 RRVEHFIQAVGSYEDRIFQKRARL 301
+ +F + + +ED ++ K+ +L
Sbjct: 450 SVLRNFFKILSQHEDSLYVKKKKL 473
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 87/180 (48%), Gaps = 13/180 (7%)
Query: 406 AKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYT 465
K K+LL D F E+ + L K RYY+ K + K+ ERE V Y
Sbjct: 468 VKKKKLLADTRRRFQIKGFFEN-IPLETTYGKTRYYDTKLSLKS--EREVI--TVCREYI 522
Query: 466 EGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPS 525
GL WV YY +G +W+WFYPY YAPFA D+ ++ + P Q + V P
Sbjct: 523 LGLSWVFKYYVKGATNWEWFYPYDYAPFACDIANVRSMPYLNKRTEPLDCLQQQMLVMPP 582
Query: 526 ASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKK 585
S +P+ PI + +PT+ ++DM K WQG+A LP ID LL ++K+
Sbjct: 583 QSKGLVPKEMH--------PIFNSFPTEIKIDMFDKLLPWQGVAILPIIDIETLLYQIKE 634
>gi|16768996|gb|AAL28717.1| LD13761p [Drosophila melanogaster]
Length = 346
Score = 126 bits (316), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 83/224 (37%), Positives = 123/224 (54%), Gaps = 26/224 (11%)
Query: 507 FELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSW 565
FE G PF P QL+GVFP+ASS +PE + KLM+DP SPI DFYP DF++D+NGK+++W
Sbjct: 2 FEKGTKPFNPLEQLMGVFPAASSSHVPEPWAKLMSDPESPIIDFYPEDFKIDLNGKKFAW 61
Query: 566 QGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCK 625
QG+A LPF+DE RL + LT EE +RN + L++ P H K
Sbjct: 62 QGVALLPFVDEKRLFKALVPYYDQLTGEEVKRNKRGDNYLYISNQSP----------HYK 111
Query: 626 QL-KIKERVEVKERLNPELS-DGMNGYISPCAGDPHPP-VFRSPVASMEDIMGNQVLCAI 682
++ KI E+ + E + +S DGM G + + V +SP++ + DI N +
Sbjct: 112 KVKKISEKDD--ESVCKAISFDGMRGTLGKTELNTAISGVLKSPISGLSDINDNITVTTT 169
Query: 683 YKLPDAHKHVTRPPAGVIFPKKIVQLED-LKPAPVLWHEDSGRR 725
++ P+ + IF K +LE+ + P VL +E SG +
Sbjct: 170 FRDPEYDED-------YIFEAK--RLENAVDPPQVLPNEQSGNK 204
>gi|407040062|gb|EKE39962.1| 5'-3' exonuclease domain containing protein [Entamoeba nuttalli
P19]
Length = 666
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 139/267 (52%), Gaps = 8/267 (2%)
Query: 30 EREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDAN 89
+R+ R +++ FDSN ITPGT+FM + IAL YI R++ND W +KVILSD+
Sbjct: 106 QRKRRYCSILNNTGGFDSNCITPGTKFMEKIGIALHGYIVNRMDNDLYWSGLKVILSDSK 165
Query: 90 VPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPG 149
V GEGEHKI ++R + RHC+YG+D DLI+L L + + +ILRE
Sbjct: 166 VAGEGEHKIYEFIRKEIEKNKKFKEERHCIYGMDGDLIILTLGINITNMTILREEQEIIK 225
Query: 150 QQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFR 209
+ +KC +CG+ H + GK + + + + ++ + + E
Sbjct: 226 KNNKCDICGKK-HKTKD-HGKETKLIMCYPNELRKWLINEAKKNLIETKKEEGEEYKEED 283
Query: 210 IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYL 269
I EI + I+ F+ VGNDFLP +P+++I+ G + +L+ Y K + G L
Sbjct: 284 IQIIEEEIIKDFILISFL-----VGNDFLPRIPSIKIQTGGMEMLLKNYWKLYVK-GKRL 337
Query: 270 TDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
+ G++ +++ + + +G E I +
Sbjct: 338 SKGTEINIKNFKELFKMIGEEESNILK 364
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 125/254 (49%), Gaps = 14/254 (5%)
Query: 375 RLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEED---KVKL 431
RLS G I I + F+ +E K ++ +DK N D ++KL
Sbjct: 336 RLSKGTEIN--IKNFKELFKMIGEEESNILKGIIQNTKKDKEVKEYDQNIYFDSSKEIKL 393
Query: 432 GEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYA 491
+ G+ +RYY+ FN E +++V Y EG+ WV +YY + SW+W+Y +HYA
Sbjct: 394 NQEGYHDRYYQIHFNTTNIE----FIQNIVHHYFEGISWVFNYYLNTLPSWRWYYKFHYA 449
Query: 492 PFASDLKDLDQFN--ISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDF 549
PFA D N ISF P P QLL V P S LP + P SPI +
Sbjct: 450 PFALDFALYLNENDSISFSSDTPILPLEQLLAVLPPHSFINLPSKLAHFVLSPTSPILHY 509
Query: 550 YPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIM-ADMLFVL 608
+ T F++D+NG+ ++G+ LP ID L V +EH+L + +RN ++ ++L+V
Sbjct: 510 FNTSFKIDINGENKLYKGVPLLPDIDINLLHSFVFNLEHSLPPSDLKRNLLLPFNILYVT 569
Query: 609 --LSHPLSASIYTL 620
S PL + I +L
Sbjct: 570 KNSSLPLFSKIQSL 583
>gi|123410059|ref|XP_001303596.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
gi|121884988|gb|EAX90666.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
Length = 1018
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/260 (32%), Positives = 124/260 (47%), Gaps = 53/260 (20%)
Query: 2 NQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLS 61
+QQRSRR+ A++D + ++ FD I+PGT FM L+
Sbjct: 93 SQQRSRRYLAARDHSMNS-------------------------FDRTQISPGTVFMDKLN 127
Query: 62 IALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYG 121
AL +I + D W + +VI S + V GEGEHKI+ ++R R + +DP+ HCLY
Sbjct: 128 DALMEFIKDKREKDRTWSRPRVIYSSSFVAGEGEHKILDFIREGRAISDWDPDLVHCLYS 187
Query: 122 LDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEK 181
DADLI L L THE + +LRE Q+ + E K FD
Sbjct: 188 TDADLIFLGLQTHEKNILLLREADAANFQKS-----------LSPFEAKTAITNYSFD-- 234
Query: 182 GDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEID-LECIVDDFIFMCFFVGNDFLPH 240
++ +H LREYL +F ID +E ++DDFI + F +GNDF+P
Sbjct: 235 ---------AFELIHFPLLREYLLLDFGCG-----IDEIEKVIDDFIAISFLIGNDFIPS 280
Query: 241 MPTLEIREGAINLLMAVYKK 260
++IR G N ++ Y+K
Sbjct: 281 FTDIDIRSGDYNDVIDQYRK 300
Score = 105 bits (263), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 83/160 (51%), Gaps = 19/160 (11%)
Query: 454 EETRKDVVLRYTEGLC------------WVMHYYYEGVCSWQWFYPYHYAP-FASDLKDL 500
EE++KD + GLC WV+ YY G SW W YPY YAP + +
Sbjct: 364 EESQKDYL-----GLCREMSKSILDAFYWVLRYYNSGCISWTWSYPYLYAPPLEVVIPFI 418
Query: 501 DQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNG 560
D++ FE G P PF Q L +FP S+H +PE LM P SPI+ FYP FE D+NG
Sbjct: 419 DEYKPEFETGKPNLPFLQQLSIFPPQSAHLMPEPLANLMKAP-SPIAKFYPEKFETDLNG 477
Query: 561 KRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSI 600
K+ + + LP +D A + + + + + E+ +RN +
Sbjct: 478 KKAEYHAVVVLPILDYAAIQEAYESVISQVDAEDLKRNRL 517
>gi|440492471|gb|ELQ75035.1| 5'-3' exonuclease HKE1/RAT1 [Trachipleistophora hominis]
Length = 606
Score = 123 bits (308), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 129/264 (48%), Gaps = 25/264 (9%)
Query: 40 SDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIM 99
++ + FD N ITPGT FM L + +I RL N+P ++ + I S+ GEGE KIM
Sbjct: 197 TEDEAFDKNAITPGTRFMYDLEKRMDKFIRERLANNPMYKNLCFIYSNGRRAGEGEQKIM 256
Query: 100 SYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQ-QDKCFLC 157
+ +R +N N +H +Y DADLI L + H + I+RE + F Q Q C C
Sbjct: 257 TLIRKMKN-----RNLKHTIYSPDADLIFLGTSLHGRNVKIMREDLEFVYLQRQHFCEKC 311
Query: 158 GQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEI 217
G+ GHL+ C A FD ++V K+ L E L + +E
Sbjct: 312 GKKGHLSTYCNKLALFSCIFFD-----LIVLKR--------ILSEELSM---LITTSYEF 355
Query: 218 DLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSL 277
+ + DD+I M F GNDFLP + ++R AI +L + + F Y+T +
Sbjct: 356 NR--MADDWILMSFLAGNDFLPTLQCFDVRFEAIEILTKLLAENFNRTKKYITYKGEIDF 413
Query: 278 RRVEHFIQAVGSYEDRIFQKRARL 301
+++F + + YED ++ K+ +L
Sbjct: 414 AVLKNFFRILAHYEDHLYIKKKKL 437
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 81/169 (47%), Gaps = 13/169 (7%)
Query: 407 KLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTE 466
K K+LL D F E+ + L K RYY+ K + K+ ERE V Y
Sbjct: 433 KKKKLLTDTRRRFQIKGFFEN-ISLETTYGKTRYYDTKLHLKS--EREVIT--VCREYIL 487
Query: 467 GLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSA 526
GL WV YY +G +W+WFYPY YAPFA D+ ++ + P Q + V P
Sbjct: 488 GLSWVFKYYVKGATNWEWFYPYDYAPFACDIANVRSMPYLNKRTEPLDCLQQQMLVMPPQ 547
Query: 527 SSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFID 575
S +P+ PI D +PT+ ++DM K WQG+A LP ID
Sbjct: 548 SKGLVPKEMH--------PIFDSFPTEIKIDMFDKLLPWQGVAILPIID 588
>gi|283771378|gb|ADB28925.1| exonuclease XRN1 domain [Zea mays subsp. mays]
Length = 236
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 80/128 (62%), Gaps = 7/128 (5%)
Query: 397 PQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREET 456
P+ + E + KL +LL FN +NP D ++LG PGWK R++ E F AKT E +
Sbjct: 78 PESERPELRQKLDDLL------FNEENPY-DSIRLGLPGWKSRFFREHFGAKTSSEIGKL 130
Query: 457 RKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPF 516
+ D+ +Y EGLCWV+ Y+ V SW W+YP++ APF SDLK L + ISF + P +PF
Sbjct: 131 QNDMAQKYLEGLCWVLQCYFADVPSWSWYYPFYVAPFVSDLKGLSRIEISFTVDKPLRPF 190
Query: 517 NQLLGVFP 524
+QL+ V P
Sbjct: 191 DQLMAVLP 198
Score = 50.1 bits (118), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 8/63 (12%)
Query: 249 GAINLLMAVYKKEFRALGGYLTD--------GSKPSLRRVEHFIQAVGSYEDRIFQKRAR 300
GA++LL+ VYK F +GGY+T+ G+ + R+E F + YED+IF KR
Sbjct: 1 GAVDLLIEVYKTTFNKMGGYITNTDKVKDKYGAYLEVSRLETFFHELSMYEDKIFLKRYD 60
Query: 301 LHQ 303
L Q
Sbjct: 61 LKQ 63
>gi|449703901|gb|EMD44256.1| 5'3' exonuclease domain containing protein [Entamoeba histolytica
KU27]
Length = 670
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 125/254 (49%), Gaps = 14/254 (5%)
Query: 375 RLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEED---KVKL 431
RLS G I I + F+ +E K ++ +DK N D ++KL
Sbjct: 336 RLSKGTEIN--ITNFKELFKMIGEEESNILKGIIQNTKKDKEVKEYDQNIYFDSSKEIKL 393
Query: 432 GEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYA 491
+ G+ +RYY+ FN E +++V Y EG+ W+ +YY + SW+W+Y +HYA
Sbjct: 394 NKEGYHDRYYQIHFNTTNIE----FIQNIVHHYFEGISWIFNYYLNTLPSWRWYYKFHYA 449
Query: 492 PFASDLKDLDQFN--ISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDF 549
PFA D N ISF P P QLL V P S LP + P SPI +
Sbjct: 450 PFALDFALYLNENDSISFSSDTPILPLEQLLAVLPPQSFINLPSKLAHFVLSPTSPILHY 509
Query: 550 YPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIM-ADMLFVL 608
+ T F++D+NG+ ++G+ LP ID L V +EH+L E +RN ++ ++L+V
Sbjct: 510 FNTSFKIDINGENKLYKGVPLLPDIDINLLHSFVFNLEHSLPPSELKRNILLPFNILYVT 569
Query: 609 --LSHPLSASIYTL 620
S PL + I +L
Sbjct: 570 KNSSLPLFSKIQSL 583
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 138/267 (51%), Gaps = 8/267 (2%)
Query: 30 EREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDAN 89
+R+ R +++ FDSN ITPGT+FM + IAL YI R++ND W +KVILSD+
Sbjct: 106 QRKRRYCSVLNNTGGFDSNCITPGTKFMEKIGIALHGYIVNRMDNDLYWSGLKVILSDSK 165
Query: 90 VPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPG 149
V GEGEHKI ++R + RHC+YG+D DLI+L L + + +ILRE
Sbjct: 166 VAGEGEHKIYEFIRKEIKKNERFKEERHCIYGMDGDLIILTLGINIRNMTILREEQEIIK 225
Query: 150 QQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFR 209
+ +KC +CG+ H + GK + + + + ++ + + E
Sbjct: 226 KNNKCDICGKK-HKTKD-HGKETKLIMCYPNELRKWLINEAKKNLIETKKEEGEEYKEED 283
Query: 210 IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYL 269
I EI + I+ F+ VGNDFLP +P+++I+ G + +L+ Y K + G L
Sbjct: 284 IEIIEEEIIKDFILISFL-----VGNDFLPRIPSIKIQTGGMEMLLKNYWKLYVK-GKRL 337
Query: 270 TDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
+ G++ ++ + + +G E I +
Sbjct: 338 SKGTEINITNFKELFKMIGEEESNILK 364
>gi|67480967|ref|XP_655833.1| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
gi|56472997|gb|EAL50447.1| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
Length = 666
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 125/254 (49%), Gaps = 14/254 (5%)
Query: 375 RLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEED---KVKL 431
RLS G I I + F+ +E K ++ +DK N D ++KL
Sbjct: 336 RLSKGTEIN--ITNFKELFKMIGEEESNILKGIIQNTKKDKEVKEYDQNIYFDSSKEIKL 393
Query: 432 GEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYA 491
+ G+ +RYY+ FN E +++V Y EG+ W+ +YY + SW+W+Y +HYA
Sbjct: 394 NKEGYHDRYYQIHFNTTNIE----FIQNIVHHYFEGISWIFNYYLNTLPSWRWYYKFHYA 449
Query: 492 PFASDLKDLDQFN--ISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDF 549
PFA D N ISF P P QLL V P S LP + P SPI +
Sbjct: 450 PFALDFALYLNENDSISFSSDTPILPLEQLLAVLPPQSFINLPSKLAHFVLSPTSPILHY 509
Query: 550 YPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIM-ADMLFVL 608
+ T F++D+NG+ ++G+ LP ID L V +EH+L E +RN ++ ++L+V
Sbjct: 510 FNTSFKIDINGENKLYKGVPLLPDIDINLLHSFVFNLEHSLPPSELKRNILLPFNILYVT 569
Query: 609 --LSHPLSASIYTL 620
S PL + I +L
Sbjct: 570 KNSSLPLFSKIQSL 583
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 138/267 (51%), Gaps = 8/267 (2%)
Query: 30 EREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDAN 89
+R+ R +++ FDSN ITPGT+FM + IAL YI R++ND W +KVILSD+
Sbjct: 106 QRKRRYCSVLNNTGGFDSNCITPGTKFMEKIGIALHGYIVNRMDNDLYWSGLKVILSDSK 165
Query: 90 VPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPG 149
V GEGEHKI ++R + RHC+YG+D DLI+L L + + +ILRE
Sbjct: 166 VAGEGEHKIYEFIRKEIKKNERFKEERHCIYGMDGDLIILTLGINIRNMTILREEQEIIK 225
Query: 150 QQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFR 209
+ +KC +CG+ H + GK + + + + ++ + + E
Sbjct: 226 KNNKCDICGKK-HKTKD-HGKETKLIMCYPNELRKWLINEAKKNLIETKKEEGEEYKEED 283
Query: 210 IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYL 269
I EI + I+ F+ VGNDFLP +P+++I+ G + +L+ Y K + G L
Sbjct: 284 IEIIEEEIIKDFILISFL-----VGNDFLPRIPSIKIQTGGMEMLLKNYWKLYVK-GKRL 337
Query: 270 TDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
+ G++ ++ + + +G E I +
Sbjct: 338 SKGTEINITNFKELFKMIGEEESNILK 364
>gi|310831294|ref|YP_003969937.1| putative 5'-3' exonuclease [Cafeteria roenbergensis virus BV-PW1]
gi|309386478|gb|ADO67338.1| putative 5'-3' exonuclease [Cafeteria roenbergensis virus BV-PW1]
Length = 562
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 97/187 (51%), Gaps = 12/187 (6%)
Query: 427 DKVKLGE---PGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQ 483
D V+LGE + +RYYE F E + Y +GL WV +YY+ GV SW
Sbjct: 379 DPVRLGEGTFDDYSKRYYEHYFYG----SNNENIIKICYEYIKGLTWVTNYYFYGVPSWD 434
Query: 484 WFYPYHYAPFASDLKD----LDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLM 539
++YPY APF DL LD + F+ G P KP QLL V P S + LP ++L
Sbjct: 435 YYYPYDQAPFLKDLSKVINLLDMTHFKFKKGTPLKPLEQLLAVMPPQSKYLLPTKVQRLF 494
Query: 540 TDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 599
+ SP+ YP DF+ D KR WQGI LPF++ + E KIE TLT ++ +N
Sbjct: 495 NE-ESPLGHLYPIDFKQDFIHKRKYWQGIPLLPFLEIDTIQKEFSKIEKTLTPKDLHKNR 553
Query: 600 IMADMLF 606
+ + ++
Sbjct: 554 VDKEFIY 560
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 125/261 (47%), Gaps = 60/261 (22%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
+ QQRSRRF++ D A +RL+ + +P ++ ++++ ITPGT+FM +
Sbjct: 100 IKQQRSRRFKSVSDNA----LYDRLK-----DKHNIPK---NKFWNNSSITPGTDFMMKI 147
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVR-LQRNLPGYDPNTRHCL 119
+ ++ + + K+I S N PGEGEHKI+ ++R Q N + + +
Sbjct: 148 TKYIKEW--------ATKQSYKIIFSSGNTPGEGEHKILDFIRQRQINYTNELNSGPYVI 199
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 179
YGLDADLI L++A + ++ +L + HL
Sbjct: 200 YGLDADLIFLSIALN----------------RNDVYLMREAEHLNKG------------- 230
Query: 180 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEI--DLECIVDDFIFMCFFVGNDF 237
KGD + Q + + ++E ++Y EI +++DFIF+C+F+GNDF
Sbjct: 231 -KGDIL-------QLIDLEVMKESINYTMLQMLEGVEIKPTKTQLINDFIFICYFLGNDF 282
Query: 238 LPHMPTLEIREGAINLLMAVY 258
LPH +L+I + + +L+ Y
Sbjct: 283 LPHYQSLDIYDDGLPILLKTY 303
>gi|167377811|ref|XP_001734553.1| 5'->3' exoribonuclease [Entamoeba dispar SAW760]
gi|165903890|gb|EDR29281.1| 5'->3' exoribonuclease, putative [Entamoeba dispar SAW760]
Length = 662
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 126/254 (49%), Gaps = 14/254 (5%)
Query: 375 RLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEED---KVKL 431
RLS G I I + F+ +E K ++ +DK N D ++KL
Sbjct: 342 RLSKGTEIN--IKNFKELFKMIGEEESNILKEIIQNTKKDKEVKVYDQNIYFDSSKEIKL 399
Query: 432 GEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYA 491
+ G+ +RYY+ FN E +++V Y EG+ WV +YY + SW+W+Y +HYA
Sbjct: 400 NQEGYHDRYYQIHFNTTNIE----FIQNIVHHYFEGISWVFNYYLNKLPSWRWYYKFHYA 455
Query: 492 PFASDLKDLDQFN--ISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDF 549
PFA D N ISF P P QLL V P S + +P + PNSPI +
Sbjct: 456 PFALDFALYLNENDSISFSSDTPILPLEQLLSVLPPHSFNNIPSKLAHFVLSPNSPILHY 515
Query: 550 YPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIM-ADMLFVL 608
+ T F++D+NG+ ++GI LP ID L V +E +L + +RN ++ ++L+V
Sbjct: 516 FNTSFKIDINGENKLYKGIPLLPNIDIDLLHSFVFDLELSLPPSDFKRNILLPFNILYVT 575
Query: 609 L--SHPLSASIYTL 620
S PL + I +L
Sbjct: 576 KNSSLPLFSKIQSL 589
Score = 106 bits (264), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 79/130 (60%)
Query: 30 EREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDAN 89
+R+ R +++ FDSN ITPGT+FM + IAL YI R++ND W ++VILSD+
Sbjct: 106 QRKRRYCSIINNNGGFDSNSITPGTKFMEKIGIALHGYIVNRMDNDIYWSGLRVILSDSK 165
Query: 90 VPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPG 149
V GEGEHKI ++R + RHC+YG+D DLI+L L + + +ILRE
Sbjct: 166 VAGEGEHKIYEFIRKEIEKNCKFKEERHCIYGMDGDLIILTLGINITNMTILREEQEIIK 225
Query: 150 QQDKCFLCGQ 159
+ KC +CG+
Sbjct: 226 KNIKCDICGK 235
>gi|323455278|gb|EGB11147.1| hypothetical protein AURANDRAFT_22633 [Aureococcus anophagefferens]
Length = 356
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/277 (35%), Positives = 144/277 (51%), Gaps = 36/277 (12%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRF ++++A ++AA L R G + P + ++ +D N ITPGTEFMA L
Sbjct: 89 MNQQRTRRFCSAREADEAAAATREL---LARRGHR--PAAKAR-WDHNAITPGTEFMAKL 142
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ + + + P ++ VI+SDA PGEGEHKIM ++R + P RH +
Sbjct: 143 AAFCRRWAESLVARCP---QLSVIVSDAATPGEGEHKIMDWIRRSQADPDRR-GERHAVC 198
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G DADL+ L+LA H +LRE V T + G
Sbjct: 199 GQDADLMFLSLALHAPRVYVLRERVETRRK-------------------PRGGGKGGPPP 239
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNP-----PFEIDLECIVDDFIFMCFFVGN 235
+ + P + Q+L LR L + + PF D E +DDF+ +CFFVGN
Sbjct: 240 EPRKAFGPPR-LQYLSCQRLRRCLIGDASLNAAADGALPFPRDDERFLDDFVLLCFFVGN 298
Query: 236 DFLPHMPTLEIREGAINLLMAVYKKEF-RALGGYLTD 271
DFLP +P+L I +G ++LL+ +Y++ R LGGYLTD
Sbjct: 299 DFLPQLPSLSIPDGGLDLLLLLYRRALPRHLGGYLTD 335
>gi|403221200|dbj|BAM39333.1| 5'-3' exoribonuclease 1 [Theileria orientalis strain Shintoku]
Length = 642
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 156/328 (47%), Gaps = 38/328 (11%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQE--FEREGRKLPPKS-DSQVFDSNVITPGTEFM 57
+NQQR+RRFR K + +E +E +KLP +S D+ FD + I+PGTEFM
Sbjct: 180 INQQRTRRFRLYKSTTKPGFKPYYKSEEGKYEYTVKKLPIQSYDNVSFDPSYISPGTEFM 239
Query: 58 AVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTR- 116
+++ L+ +I L+ + WE ++ S +VPGEGEHKI + R + DP +
Sbjct: 240 SMMDSELRNWIALQ-TYEGTWEDRYIVYSGTDVPGEGEHKIYDAI---RRMAECDPKVKQ 295
Query: 117 --HCLYGLDADLIMLALATHEVHFSILREVV-FTPGQQDKC----FLCGQPGHLAANCEG 169
H +YGLDADL+ML+L T + ILRE P + K + + G L +
Sbjct: 296 ENHLVYGLDADLMMLSLITKMPNMYILREKYDHAPHKLAKIKPNPYYSKETGLLHFHGMD 355
Query: 170 KAKRKAGEFDEKGDEVV--------------VPKKPYQFLHIWTLREYLDYEFRIPNPPF 215
K +++ + V +FL R L +F + +
Sbjct: 356 YIDFKISDYEVLSMRFLRRIMYSRCIRTSEAVSNDANKFLFNQNSRNRLTDDFSLLS-FL 414
Query: 216 EIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKP 275
+D C + VGNDFLPH+PT+E+ + N L+ Y K G+LT+ K
Sbjct: 415 AVDKLCTTN--------VGNDFLPHLPTVELCNSSFNDLVNTYYKMLPKFRGFLTESYKI 466
Query: 276 SLRRVEHFIQAVGSYEDRIFQKRARLHQ 303
++ R++ ++ + E + F++++ L +
Sbjct: 467 NMSRLQQLMKELSKLEIKYFKQKSTLEK 494
>gi|428673024|gb|EKX73937.1| XRN 5'-3' exonuclease family protein [Babesia equi]
Length = 1049
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 156/333 (46%), Gaps = 48/333 (14%)
Query: 1 MNQQRSRRFRASK--DAADSA--AEEERLRQEFEREGRKLPPKS-----------DSQVF 45
+NQQR+RRFR K D S EE+ +E E + L P++ D+ F
Sbjct: 533 INQQRTRRFRLCKVIDKVKSILEPEEDTESEEDSEEPKPLTPENYVLRKSKIDGYDNISF 592
Query: 46 DSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQ 105
+ N I+PGT+FM L ++ +I L+ + W V+ S NVPGEGEHKI +R
Sbjct: 593 NPNYISPGTDFMTRLDNEIKNWIALQTHLGT-WGDCYVVYSGTNVPGEGEHKIYDLIRKV 651
Query: 106 RNLPGYDPNTR---HCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGH 162
L D TR H +YGLDADL++L+L T ILRE ++D H
Sbjct: 652 TTL---DRKTRLESHLVYGLDADLMILSLITKMSKMYILRE------EKD------STPH 696
Query: 163 LAANCEGK---AKRKAGEFDEKGDEVVVPKKPYQFLHIWTLR--------EYLDYEFRIP 211
+ A + AK D + + ++ L + LR Y++ +F+
Sbjct: 697 VLAKIKPDPYYAKDTGLVHFHSKDYIGLKSDNFEVLSMRKLRAGMYNRCVNYVNTKFKPK 756
Query: 212 NPPFEIDLEC---IVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGY 268
+ F + DDF + FF GNDFLPH+P +++++ + L+ Y G+
Sbjct: 757 DSAFLTKKGTPARLTDDFALLSFFAGNDFLPHLPNVDLKDSSFTDLINTYYSLLPKFNGF 816
Query: 269 LTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARL 301
LT G K RR++ ++A+ E + F+ +A +
Sbjct: 817 LTHGLKIHTRRLQSLMKAISPNEAKYFKIKAEV 849
Score = 113 bits (282), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 101/199 (50%), Gaps = 22/199 (11%)
Query: 435 GWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA 494
G+ + YYEEK ++R + + Y EGL W + YY+ G SW W Y YHYAP A
Sbjct: 860 GYAKFYYEEKCGIDYNDKR--AIRKMCEDYIEGLFWNLSYYHSGCPSWDWCYKYHYAPLA 917
Query: 495 SDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYR-----------KLMTDPN 543
SDL + +++F G+P P LL V P + + LP YR +L+++P
Sbjct: 918 SDLARVSSISVTFYKGNPITPLEHLLAVTPPSGNELLPPRYRFVIFHSACSLFRLLSEPK 977
Query: 544 SPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMAD 603
+ +++P DFE+ +GK + W+ KLPF++ +L KI ++ +E R
Sbjct: 978 GELCEYFPEDFEICQDGKEHEWEYTVKLPFLNTRKL----SKIARSVNDELEYRT----- 1028
Query: 604 MLFVLLSHPLSASIYTLDE 622
+ +L + SA +T+ +
Sbjct: 1029 LYRFVLYYLFSALFFTVTQ 1047
>gi|350646476|emb|CCD58875.1| 5'-3' exoribonuclease, putative [Schistosoma mansoni]
Length = 1638
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 129/537 (24%), Positives = 207/537 (38%), Gaps = 126/537 (23%)
Query: 105 QRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLA 164
+ NL P T Y D +I L THE++ ILRE V A
Sbjct: 47 KENLKDNSPET----YSFDPCVISPGLTTHEINICILRENVVK----------------A 86
Query: 165 ANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECI 222
NC KP+ ++ LREY+D EF PF DLE +
Sbjct: 87 QNCSAD------------------NKPFCITYLSVLREYIDLEFTELKKTLPFPYDLERL 128
Query: 223 VDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEH 282
+DD++FM F +GNDF+PH+P L I ++ + Y+ L GYL + +L R
Sbjct: 129 IDDWVFMAFLLGNDFIPHIPNLHIHAESLLTVWDTYQVVLPKLDGYLVELGYLNLPRFHK 188
Query: 283 FIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARRGDDVEP--LAQPDSLVPVSR---F 337
+++ + +E F++R A R R K AR +++E L+ D+ +P +
Sbjct: 189 YLEELSQFERDWFEER-----EAAFRWMRGKQGARMANELEKLGLSSEDNEMPSHKPPSS 243
Query: 338 HGSRLASGPSPSPYQQSECVGRL---------------DN------------GKGTSGRP 370
G R S + + G+L DN G S R
Sbjct: 244 TGKRFPEMNKSSLLDRKDDFGQLTDLIDLFVPQSGCQYDNVMLDEAAELMEEGVVVSLRT 303
Query: 371 H--KVPRLSSGATIGAAIVEAENSFET--DPQENKEEFKAKLKELLRDKSDAFNSDNPEE 426
H KV +L + + + I N++ T D ++++ + +E + D++ + + +
Sbjct: 304 HDDKVKQLCNKSDLSNRI-SHNNAYNTMDDNHDHEDNIDDETEEEVEDENVTYVESDTDL 362
Query: 427 DKVKLGEPGWKERYYEEKFNAKTPEE-----REETRKDVVLRYTEGLCWVMHYYYEGVCS 481
D+ L + YY K + E T ++ Y L W+++YY+ V
Sbjct: 363 DEDLLVYKMHRRDYYSSKLGIQLDEMSGDLGENSTLMSLIQDYIRMLQWILNYYFLNVAD 422
Query: 482 WQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTD 541
W +FY YHYAPF + DL + FE F F + S LP
Sbjct: 423 WDFFYAYHYAPF---VHDLILYTKKFENCQNFNGIKLSWTNFQTNSQPVLP--------- 470
Query: 542 PNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
+PF+D+ L++ +K + LTE+E +RN
Sbjct: 471 ---------------------------FLIPFLDQQLLINAMKDGDTKLTEQEKQRN 500
>gi|256077064|ref|XP_002574828.1| 5'-3' exoribonuclease [Schistosoma mansoni]
Length = 1637
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 129/547 (23%), Positives = 206/547 (37%), Gaps = 147/547 (26%)
Query: 105 QRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLA 164
+ NL P T Y D +I L THE++ ILRE V A
Sbjct: 47 KENLKDNSPET----YSFDPCVISPGLTTHEINICILRENVVK----------------A 86
Query: 165 ANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECI 222
NC KP+ ++ LREY+D EF PF DLE +
Sbjct: 87 QNCSAD------------------NKPFCITYLSVLREYIDLEFTELKKTLPFPYDLERL 128
Query: 223 VDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEH 282
+DD++FM F +GNDF+PH+P L I ++ + Y+ L GYL + +L R
Sbjct: 129 IDDWVFMAFLLGNDFIPHIPNLHIHAESLLTVWDTYQVVLPKLDGYLVELGYLNLPRFHK 188
Query: 283 FIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARRGDDVEP--LAQPDSLVPVSR---F 337
+++ + +E F++R A R R K AR +++E L+ D+ +P +
Sbjct: 189 YLEELSQFERDWFEER-----EAAFRWMRGKQGARMANELEKLGLSSEDNEMPSHKPPSS 243
Query: 338 HGSRLASGPSPSPYQQSECVGRL---------------DN------------GKGTSGRP 370
G R S + + G+L DN G S R
Sbjct: 244 TGKRFPEMNKSSLLDRKDDFGQLTDLIDLFVPQSGCQYDNVMLDEAAELMEEGVVVSLRT 303
Query: 371 H--KVPRLSSGATIGAAIVEAENSFET--DPQENKEEFKAKLKELLRDKSDAFNSDNPEE 426
H KV +L + + + I N++ T D ++++ + +E + D++ + + +
Sbjct: 304 HDDKVKQLCNKSDLSNRI-SHNNAYNTMDDNHDHEDNIDDETEEEVEDENVTYVESDTDL 362
Query: 427 DKVKLGEPGWKERYYEEKFNAKTPEE-----REETRKDVVLRYTEGLCWVMHYYYEGVCS 481
D+ L + YY K + E T ++ Y L W+++YY+ V
Sbjct: 363 DEDLLVYKMHRRDYYSSKLGIQLDEMSGDLGENSTLMSLIQDYIRMLQWILNYYFLNVAD 422
Query: 482 WQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTD 541
W +FY YHYAPF DL
Sbjct: 423 WDFFYAYHYAPFVHDLI------------------------------------------- 439
Query: 542 PNSPISDFYPTDFE--VDMNGKRYSWQG--------IAKLPFIDEARLLDEVKKIEHTLT 591
Y FE + NG + SW +PF+D+ L++ +K + LT
Sbjct: 440 -------LYTKKFENCQNFNGIKLSWTNFQTNSQPVFTLIPFLDQQLLINAMKDGDTKLT 492
Query: 592 EEEARRN 598
E+E +RN
Sbjct: 493 EQEKQRN 499
>gi|260944870|ref|XP_002616733.1| hypothetical protein CLUG_03974 [Clavispora lusitaniae ATCC 42720]
gi|238850382|gb|EEQ39846.1| hypothetical protein CLUG_03974 [Clavispora lusitaniae ATCC 42720]
Length = 483
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 67/99 (67%)
Query: 509 LGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGI 568
LG PF P+ QL+ V P+AS H LPE +R LM+ P+S I DFYP F++DMNG + SWQGI
Sbjct: 87 LGEPFNPYEQLMAVLPAASGHTLPEVFRSLMSHPDSEIIDFYPETFQIDMNGAKMSWQGI 146
Query: 569 AKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 607
A LPFIDE RLL V+ LT++E RN+ LF+
Sbjct: 147 ALLPFIDEKRLLTAVRAKYSLLTDDERERNTNKKAQLFI 185
>gi|281201939|gb|EFA76147.1| hypothetical protein PPL_10728 [Polysphondylium pallidum PN500]
Length = 2230
Score = 116 bits (291), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 99/191 (51%), Gaps = 22/191 (11%)
Query: 3 QQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSI 62
+QR RRFR++KDA D+ + ++LP + FDSN I+P TEFM ++
Sbjct: 127 EQRKRRFRSAKDAKDALS-------------KRLPSDPVFEPFDSNCISPATEFMCKVNE 173
Query: 63 ALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGL 122
+ Y + P + +++SDA+VPGEGEHKI+ ++R R + +T H YG+
Sbjct: 174 WVLTYAQALVKRMPS---VSIVVSDASVPGEGEHKIIDFIRAHRE--HWPSDTSHVFYGM 228
Query: 123 DADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKG 182
DADLI L L+T HF +LR++ G Q C C GHL CE +K E+
Sbjct: 229 DADLIFLGLSTQLSHFFVLRDL----GAQIYCSTCKNNGHLCYECECAVAKKRMNDPERS 284
Query: 183 DEVVVPKKPYQ 193
+ + P Q
Sbjct: 285 SRLSIRNIPIQ 295
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 85/169 (50%), Gaps = 11/169 (6%)
Query: 440 YYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKD 499
YY+ K T ++ EET D+ + +GL WV+ YY G +W W+YPYHYAP SDL
Sbjct: 707 YYKLKIGV-TIDKVEETANDICKAFVDGLAWVLRYYTVGCPAWSWYYPYHYAPLISDLAK 765
Query: 500 L---------DQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFY 550
D +I F+ G P +P+ LL V P SS LP + +P+S +
Sbjct: 766 FVEKQSQVYNDTKHIVFDYGAPLEPYIHLLSVLPHYSSKLLPPKLADSIVREPAPLSRLF 825
Query: 551 PTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVK-KIEHTLTEEEARRN 598
F +D NG+ SW+G+ L FI+ L + I+ L+ EE RN
Sbjct: 826 EERFRIDPNGEEVSWKGVVLLDFINTNVLKEHASPIIKDQLSAEELERN 874
Score = 66.2 bits (160), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 66/128 (51%), Gaps = 10/128 (7%)
Query: 192 YQFLHIWTLREYLDYEFRI---PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIRE 248
+ F+++ L+EY Y + +D +++DF MC +GNDFLPH+PT+ I+E
Sbjct: 557 FDFVNLDYLKEYFRYSVLSGLSESVASRVDCNRMINDFTMMCMLLGNDFLPHLPTMAIKE 616
Query: 249 GAINLLMAVYK------KEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF-QKRARL 301
G+I L+M Y+ K+ + YLTDG + + + + +E F K ++
Sbjct: 617 GSIELMMTWYRDWLSSFKDESSTIQYLTDGPNINYKPFHKLLLMLSKWESLYFPDKLEKM 676
Query: 302 HQRHAERI 309
+++ R+
Sbjct: 677 YKKEIFRL 684
>gi|407849156|gb|EKG03992.1| 5'-3' exonuclease XRNB, putative,exoribonuclease 2, putative
[Trypanosoma cruzi]
Length = 389
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 83/154 (53%), Gaps = 5/154 (3%)
Query: 437 KERYYEEKFNAKTPEEREETRKDVVL---RYTEGLCWVMHYYYEGVCSWQWFYPYHYAPF 493
+++YYE+KF P +RE K + L Y G WVM YY G SW W+YP++YAP
Sbjct: 24 RDKYYEKKFGW-DPADREAFEKKIQLCCAEYLRGTQWVMRYYTTGCPSWDWYYPFYYAPL 82
Query: 494 ASDLKDL-DQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPT 552
DL + N+ LG P P QLL V P S ALPE + DP S + FYP
Sbjct: 83 LQDLAHFPGKVNVKMTLGAPRHPVLQLLAVLPRLSVEALPEELHDAVKDPESVLGVFYPE 142
Query: 553 DFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKI 586
+VD + +S+QG+ +LPF++ + L +K+
Sbjct: 143 KVDVDFSEAHFSYQGVLRLPFVNNSHLQSACQKL 176
>gi|221055850|ref|XP_002259063.1| 5'-3' exoribonuclease [Plasmodium knowlesi strain H]
gi|193809134|emb|CAQ39836.1| 5'-3' exoribonuclease, putative [Plasmodium knowlesi strain H]
Length = 648
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 95/175 (54%), Gaps = 7/175 (4%)
Query: 402 EEFKAKLKELLRDKSDAFNSDNPEEDKVKLG-EPGWKERYYEEKFNAKTPEEREETRKDV 460
+ K LK L + F EE+ ++ E +K YY +KF + P++ + +
Sbjct: 457 QRLKIILKILSAQEFSYFLKRGNEENILEFTDERRYKSYYYLQKFGVEDPKQIQH----I 512
Query: 461 VLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLL 520
V +Y EGL W +HYY+ G SW W YPYHYAP SDL ++ + FE G P+ + L+
Sbjct: 513 VKKYIEGLFWNLHYYHFGCASWCWEYPYHYAPLCSDLLSFEKSDFFFEKGKPYSAYTHLI 572
Query: 521 GVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFID 575
V P ++ LPE Y+ + ++ + F+P + +D NGK+ +W+ I LPFI+
Sbjct: 573 SVLPQKDNNLLPEAYKNIYSE--DEVKSFFPENVRIDPNGKKETWEYIVHLPFIN 625
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 147/348 (42%), Gaps = 74/348 (21%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRF + +D++ + + +F+ N IT GT+FM +
Sbjct: 154 MNQQRKRRFLSLFKVSDNS--------------------NGTNLFNPNCITTGTDFMYKI 193
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+++L + + + VI S ++VPGEGEHKI+ ++R N HC+Y
Sbjct: 194 NLSLNKWFQILKKKEIF--PFDVIFSGSDVPGEGEHKILKFIRENCKRDVAFRNYSHCIY 251
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFL------------------CGQPGH 162
GLDADLIML+L TH + ILR+ L Q G
Sbjct: 252 GLDADLIMLSLVTHLNNIFILRDKYKMTNDSQVTLLENFEKAQRDFDQAKESQNTYQGGD 311
Query: 163 LAANCEGKAKRKAGEFDEKGDEVVVP--KKPYQFLHIWTLREYLD------YEFRI---- 210
+ E E D D + P + P+ +H +T Y++ Y+F I
Sbjct: 312 MDKTNERDNVDNTNEADSSLDSALPPAQRNPFCRIHHYTQDYYVNCEPLNSYDFEILDVY 371
Query: 211 --------------------PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 250
N F I +VDD +F+ F VGNDFLP +P ++I EG+
Sbjct: 372 KLRNSIRTQIATYINKLKKEKNVIFNISR--VVDDIVFLSFLVGNDFLPQIPHIDINEGS 429
Query: 251 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 298
+N ++ Y Y+T K ++R++ ++ + + E F KR
Sbjct: 430 MNEILNAYIYYIYRYNNYITLKDKVHIQRLKIILKILSAQEFSYFLKR 477
>gi|68070139|ref|XP_676981.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56496914|emb|CAH93788.1| conserved hypothetical protein [Plasmodium berghei]
Length = 635
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 144/356 (40%), Gaps = 87/356 (24%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRF + D++ + +F+ N IT GT+FM
Sbjct: 128 MNQQRKRRFLSLFKINDNSKI--------------------TNLFNPNCITTGTDFM--- 164
Query: 61 SIALQYYIHLRLNNDPGWE------KIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPN 114
Y I+L LN +I S ++VPGEGEHKI+ ++R N
Sbjct: 165 -----YKINLSLNKWFKILKKKKVFNFDIIYSGSDVPGEGEHKILKFIRENCKNDSNFKN 219
Query: 115 TRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRK 174
HC+YGLDADLIML+L TH + ILR+ + + + ++
Sbjct: 220 WNHCIYGLDADLIMLSLVTHLNNIFILRDKFKLTNDSMHNNVVNNIEKMQSEFNVNSESD 279
Query: 175 AGEFDEKGDEVVVPK-------------------------KPYQFLHIWTLR--EYLDYE 207
E D E+ + + K +++ H + L E Y+
Sbjct: 280 PNEVDNNEKEISINRELKEIDKSEENKNMGNNESLNNCFNKTHKYTHDYYLHYDELNSYD 339
Query: 208 FRI------------------------PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPT 243
F I N F I+ +VDD +F+ F VGNDFLPH+P
Sbjct: 340 FEILDIYKLRSSIKTQIATYINKLKKEKNIIFSINR--VVDDIVFLSFLVGNDFLPHIPN 397
Query: 244 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
++I EG++N ++ Y Y+T K + R++ ++ + E + F+KR
Sbjct: 398 IDINEGSMNEILNSYIFYIYKYSNYITYKDKVHIERLKIILKILSGQEYQYFKKRG 453
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 81/151 (53%), Gaps = 14/151 (9%)
Query: 433 EPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAP 492
E +K YY KF ++ ++ +V +Y EGL W +HYY+ G SW W YPYHYAP
Sbjct: 464 EKKYKSYYYLHKFGVSDSKQIQQ----IVKKYIEGLFWNLHYYHFGCASWHWEYPYHYAP 519
Query: 493 FASDLKDLDQFNISFE--------LGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNS 544
SDL ++ + FE +G P+ + L+ V P + LP+ Y+ + +
Sbjct: 520 LCSDLLSFEKSDFFFEKVTMPHKIIGKPYSAYTHLISVLPQKDKNLLPDPYKNVYAE--D 577
Query: 545 PISDFYPTDFEVDMNGKRYSWQGIAKLPFID 575
+ F+P + ++D NGK+ +W+ I LPFI+
Sbjct: 578 EVKSFFPDNVKIDPNGKKETWEYIVHLPFIN 608
>gi|429962361|gb|ELA41905.1| hypothetical protein VICG_01089 [Vittaforma corneae ATCC 50505]
Length = 630
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 138/322 (42%), Gaps = 58/322 (18%)
Query: 1 MNQQRSRRFRASK------------DAADSAAEEERLR---QEFEREGRKLPPKSDSQ-- 43
+NQQRSRRF ++ D + A RL QE E ++
Sbjct: 92 LNQQRSRRFVHAREVSEQGNFYFKDDCGNEPAHHSRLTVLDQEIENSAVSKNMSDEATPN 151
Query: 44 ---VFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMS 100
VFD+N I+PGTEFM L LQ I +++ D W VI S VPGEGE KIM
Sbjct: 152 GCGVFDTNAISPGTEFMQRLDAFLQELISFKMSFDQRWTGFNVIYSSYRVPGEGEQKIME 211
Query: 101 YVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQP 160
Y+R +N P ++ DADLI L L+ + +LRE P
Sbjct: 212 YIRKHQN-----PKFSSVIFSPDADLIFLGLSLFDHSVMVLRE--------------EPP 252
Query: 161 GHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLE 220
H +N G + D V+V + L I + Y ++P +
Sbjct: 253 KHGNSN---------GSLSNEKDFVLVDIPRLKHLIIRDFK----YVMKMP-----FNHR 294
Query: 221 CIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRV 280
++D+IF+CF VGNDFLP P EIR A++ L + + + ++TD K + +
Sbjct: 295 KFLEDWIFLCFTVGNDFLPCTPCFEIRTDALDKLTHILQTVYLNTRSFITDNGKINYDVL 354
Query: 281 -EHFIQAVGSYEDRIFQKRARL 301
E FI+ I +KR L
Sbjct: 355 REFFIECARRENTFIVEKRNNL 376
Score = 107 bits (268), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 91/179 (50%), Gaps = 15/179 (8%)
Query: 423 NPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVL---RYTEGLCWVMHYYYEGV 479
+P E+ E G K R+Y EK + KD+++ Y +GL WV +YY+ +
Sbjct: 388 DPSEEFFLETERG-KIRFYVEKMGITS-------EKDLLIACEEYIKGLEWVYNYYFYDM 439
Query: 480 CSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLM 539
SW+W+YPYH+APF +DL + F G P KP QLL V P +S LP +
Sbjct: 440 PSWEWYYPYHFAPFMTDLALVKDVKFKFTTGRPLKPLEQLLTVLPPSSKDLLPSCLHSVF 499
Query: 540 TDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
+ ++YPT+F++DM K WQ + LPFI+ L+ + ++ L E RN
Sbjct: 500 DE----FKEYYPTEFKLDMFQKCMDWQAVPILPFINVQDLIKAFENRQNELKFSECERN 554
>gi|123507009|ref|XP_001329319.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
gi|121912273|gb|EAY17096.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
Length = 1017
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 120/268 (44%), Gaps = 54/268 (20%)
Query: 3 QQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSI 62
QQRSRRF A++D D F + I+ GTEFM L
Sbjct: 94 QQRSRRFVAARDHEDGT-------------------------FSTAAISVGTEFMEELHE 128
Query: 63 ALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGL 122
L +I+ R+ NDP W + KVI S PGEGE+K +Y+R +D HC+Y
Sbjct: 129 HLLKFINSRIENDPIWSQPKVIYSSHRTPGEGENKFFNYMREHMFTEEHDEFATHCIYSP 188
Query: 123 DADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKG 182
DADL+ LAL T + ++RE G P AN GE
Sbjct: 189 DADLVFLALQTGLKNIYLMREWGSWMG----------PNEDVAN---------GEI---- 225
Query: 183 DEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMP 242
D++ V ++ LH+ LR+Y EF E DL +++DF+ + F +GNDF+PH P
Sbjct: 226 DKLRVSPGDFELLHLPLLRDYFQKEFP------ESDLPRLINDFVAISFLIGNDFIPHFP 279
Query: 243 TLEIREGAINLLMAVYKKEFRALGGYLT 270
++I G + ++ Y+ YL
Sbjct: 280 EIDIHNGDFDNILTAYRLSLLDRKKYLI 307
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 107/205 (52%), Gaps = 10/205 (4%)
Query: 400 NKEEFKAKLKELLRD-KSDAFNSDNPEEDK-VKLGEPGWKE---RYYEEKFNAKTPEERE 454
+KE A LK ++ + +S A S P + K K E KE Y + K+ + +E E
Sbjct: 314 DKENLLAFLKAVVANVRSKARPSGKPAKTKHAKSTELHTKEGARSYLKSKYKSGFNKEFE 373
Query: 455 ETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAP-FASDLKDLDQFNISFELGHPF 513
E V+ + WV+ YY+EG + W + Y Y P + + + +FE G P
Sbjct: 374 EELCHSVI---DSFNWVLKYYFEGCPDYTWQFHYFYPPPLVLVAEYVLDYEPNFEQGRPP 430
Query: 514 KPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPF 573
PF QLL + P S+ LP LM P SP++++YP FE+D+NG++Y ++G+ +PF
Sbjct: 431 LPFEQLLSILPPKMSYLLPYPIASLMFSP-SPLAEYYPDKFEIDLNGRKYEYEGVTLIPF 489
Query: 574 IDEARLLDEVKKIEHTLTEEEARRN 598
+D ++ E ++ L+ +E +RN
Sbjct: 490 VDMEKIRTETSRVFGALSPKEKKRN 514
>gi|302828800|ref|XP_002945967.1| hypothetical protein VOLCADRAFT_115887 [Volvox carteri f.
nagariensis]
gi|300268782|gb|EFJ52962.1| hypothetical protein VOLCADRAFT_115887 [Volvox carteri f.
nagariensis]
Length = 229
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 84/161 (52%), Gaps = 43/161 (26%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRF+++ ERL+ FMA L
Sbjct: 94 MNQQRSRRFKSAM---------ERLK-----------------------------FMARL 115
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
L+++I ++ DP W+K V+ S VPGEGEHKIM Y+R + P Y PN RHC+Y
Sbjct: 116 GKHLRFFIRRKMAEDPLWQKPTVVFSGHEVPGEGEHKIMEYIRWDKRQPTYAPNQRHCMY 175
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPG 161
GLDADLIML+L +HE HF +LREVV G GQP
Sbjct: 176 GLDADLIMLSLVSHEPHFCLLREVVSYTGSNR-----GQPA 211
>gi|269861191|ref|XP_002650309.1| 5'-3' exonuclease [Enterocytozoon bieneusi H348]
gi|220066257|gb|EED43747.1| 5'-3' exonuclease [Enterocytozoon bieneusi H348]
Length = 623
Score = 114 bits (285), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 142/331 (42%), Gaps = 60/331 (18%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR +K+ ++ + E K FD N ITPGT FM L
Sbjct: 72 MNQQRTRRFRGAKEVYENNIV-------YLDEHEKYDNPYLEVAFDHNAITPGTIFMEQL 124
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTR--HC 118
+ I +L+ DP W VI S+ VPGEGE KIM Y+R+ + N R H
Sbjct: 125 DEFISNLIQFKLSTDPLWANKTVIYSNYKVPGEGEQKIMEYLRIHK------KNLRESHV 178
Query: 119 LYGLDADLIMLALATHEVHFSILREVVF----TPGQQDKCFLCGQPGHLAANCEGKAKRK 174
+Y DADLI L L + I+RE V T +D+ +L H E K K
Sbjct: 179 IYSPDADLIFLGLTLPNYNIRIMREEVKYKEDTEIPKDRNYL---DNHFVLINENKLKN- 234
Query: 175 AGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVG 234
L I L+ L+ F + E ++ DFIF+CF +G
Sbjct: 235 --------------------LIIDQLKTGLEDNF---------NGERLLFDFIFLCFTIG 265
Query: 235 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTD-GSKPSLRRV-EHFIQAVGSYED 292
NDFLP P EIR A+ + + ++ Y+TD G + + + E FI+
Sbjct: 266 NDFLPSAPCFEIRTNAVEKIAEFLIRAYKRSRTYITDFGGIVNFKALKEFFIECEKDENI 325
Query: 293 RIFQKRARLHQRHAERIKREKAQARRGDDVE 323
+ +KR L + R + +DVE
Sbjct: 326 NLKEKRINLQK------SRNRMDLEFNEDVE 350
Score = 90.5 bits (223), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 102/215 (47%), Gaps = 37/215 (17%)
Query: 425 EEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQW 484
E+ + ++ E K +YY EK + + E+ K+ Y +G+ W+ YY+ SW +
Sbjct: 347 EDVEFEICEEEGKLKYYIEKMDINSEEKLMIACKE----YIKGMVWIYQYYFFNCPSWDY 402
Query: 485 FYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTD--- 541
+YPY++APF DL L+ N+ F P KPF QLL V P+ S H LPE YRK D
Sbjct: 403 YYPYYFAPFMFDLMALEVENLYFTPSKPLKPFEQLLCVLPALSMHLLPEPYRKYYYDNKM 462
Query: 542 ---------------------------PNSPISDFYP---TDFEVDMNGKRYSWQGIAKL 571
N + D + +F++D K +WQ A +
Sbjct: 463 IKLLVPGELTKNGYIKEYNSIYKTNNNENYNLKDIFEFPDLNFKIDSFHKIMNWQYTAII 522
Query: 572 PFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 606
PF++ +L+ +K +++LT EE RN I +LF
Sbjct: 523 PFVNNKNILEYSRKYQNSLTYEEINRNIIGFPVLF 557
>gi|71033443|ref|XP_766363.1| 5'-3' exonuclease [Theileria parva strain Muguga]
gi|68353320|gb|EAN34080.1| 5'-3' exonuclease, putative [Theileria parva]
Length = 534
Score = 114 bits (285), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 140/301 (46%), Gaps = 50/301 (16%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKS-DSQVFDSNVITPGTEFMAV 59
+NQQR+RRFR K ++ + E + + KL + D+ F+ + I+PGT+FM++
Sbjct: 129 INQQRTRRFRLYKSSSSDNEYYKGENGEMKYKVNKLKVGAYDNVTFNPSYISPGTQFMSM 188
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
+ ++ +I L+ N + W ++ S +VPGEGEHKI +R L + H +
Sbjct: 189 MDSEIRNWIALQ-NYEGTWNDCYIVYSGTDVPGEGEHKIYDTIRKMVELDDNVKKSTHLV 247
Query: 120 YGLDADLIMLALATHEVHFSILREV-VFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEF 178
YGLDADL+ML+L T ILRE FTP H+ + ++ F
Sbjct: 248 YGLDADLVMLSLITKLPKMYILREEHNFTP-------------HILS-----KEKPNPYF 289
Query: 179 DEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFL 238
++ D V K Y+ W DF + F GNDFL
Sbjct: 290 SKETDHVF---KVYE--SFWNY------------------------DFSLLSFMAGNDFL 320
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 298
PH+PT+E+ + N L+ +Y K L G+LT K + R++ ++ + E F+ +
Sbjct: 321 PHLPTVELCNSSFNDLINMYYKMLPKLRGFLTQTYKINTSRLQLLMKELCKNEFEYFKMK 380
Query: 299 A 299
A
Sbjct: 381 A 381
>gi|84998436|ref|XP_953939.1| 5'-3' exoribonuclease (XRN2, DHM1 ) [Theileria annulata]
gi|65304937|emb|CAI73262.1| 5'-3' exoribonuclease (XRN2, DHM1 homologue), putative [Theileria
annulata]
Length = 619
Score = 114 bits (285), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 158/308 (51%), Gaps = 16/308 (5%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQ-EFEREGRKLPPKS-DSQVFDSNVITPGTEFMA 58
+NQQR+RRFR K +++S E ++ + + + KL + D+ F+ + I+PGT+FM+
Sbjct: 171 INQQRTRRFRLYK-SSNSDNEYYKVEDGKMKYKVNKLKIGAYDNVSFNPSYISPGTQFMS 229
Query: 59 VLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHC 118
++ ++ +I L+ N + W ++ + +VPGEGEHKI +R L N+ H
Sbjct: 230 MMDSEIRNWIALQ-NYEGTWNDCYIVYNGTDVPGEGEHKIYDTIRKMLELDPDVRNSTHL 288
Query: 119 LYGLDADLIMLALATHEVHFSILR-EVVFTPGQQDKC----FLCGQPGHLAANCEGKAKR 173
+YGLDADL+ML+L T ILR E +TP K + + G L + +
Sbjct: 289 VYGLDADLVMLSLITKLPKMYILREEYSYTPHILSKEKPDPYYSKKTGLLHIHGKDFIDL 348
Query: 174 KAGEFDEKGDEVVVPKKPYQFLHIW-TLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFF 232
K+ ++ ++ + + I +++ L+ IPN + DDF + F
Sbjct: 349 KSNNYEVLSMNLLRKTMYSRCMSISGSVKNDLNRFLFIPNAKNR-----LTDDFSLLSFM 403
Query: 233 VG-NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYE 291
G NDFLPH+P++E+ + N L+ +Y K L G+LT K ++ R++ ++ + E
Sbjct: 404 AGRNDFLPHLPSVELCNSSFNDLINMYYKMLPKLRGFLTLNYKINMSRLQLLMKELCKKE 463
Query: 292 DRIFQKRA 299
F+ ++
Sbjct: 464 FDYFKMKS 471
Score = 80.9 bits (198), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 59/126 (46%), Gaps = 10/126 (7%)
Query: 474 YYYEGVCSWQW---------FYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFP 524
YYYE C + Y YHYAP SDL + I F G P P LL + P
Sbjct: 488 YYYENKCDIDFNNKKAIRKMCYKYHYAPLVSDLAKISGTTIKFYKGEPITPLEHLLAITP 547
Query: 525 SASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVK 584
+S LP YR L + P+ + ++P DFE+ +GK W+ + KLPF+D L +
Sbjct: 548 PNNSQLLPPVYRSL-SGPDGSLCQYFPEDFEICQDGKDNEWEHVVKLPFLDTKHLCQVAR 606
Query: 585 KIEHTL 590
+ L
Sbjct: 607 SVNDEL 612
>gi|147838081|emb|CAN65206.1| hypothetical protein VITISV_016718 [Vitis vinifera]
Length = 389
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 92/165 (55%), Gaps = 5/165 (3%)
Query: 593 EEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYIS 652
EE RNS+M D+L+V HPL+ + + RV +N S GMNGY+
Sbjct: 7 EEQVRNSVMFDLLYVHAVHPLATQVIYYYHFYQSSPPLARVIWPIDIN--ASGGMNGYLW 64
Query: 653 PCAGDPHPPVFRSPVASMEDIMGNQVLCAIYKLPDAHKHVTRPPAGVIFPKKIVQLEDLK 712
C + F S ++ +++I NQV Y P HKH+ PP GV+ P+K+++ D+K
Sbjct: 65 LCERNGWRSEFPSSISGLQNIEHNQVFNVTYINPPHHKHIPEPPMGVVMPEKVLRPFDIK 124
Query: 713 PAPVLWHEDSGRRPHENGRHNPHG--TISGRQLGEAAHRLVANSL 755
P PVLWHED+G R + GR P ISG LGEAAHRL+ N+L
Sbjct: 125 PLPVLWHEDNGGR-RQQGRERPQVPRAISGPLLGEAAHRLLKNTL 168
>gi|156086892|ref|XP_001610853.1| 5'-3' exonuclease [Babesia bovis T2Bo]
gi|154798106|gb|EDO07285.1| 5'-3' exonuclease, putative [Babesia bovis]
Length = 509
Score = 112 bits (281), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 147/314 (46%), Gaps = 22/314 (7%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQE--FEREGRKLP-PKSDSQVFDSNVITPGTEFM 57
+NQQR RRF SK+ A + E + ++LP + D+ F+ N I+PGT+FM
Sbjct: 89 INQQRGRRFLTSKNVDPLADICSAVSAEDGYTYIAKRLPFDEYDNVSFNPNYISPGTDFM 148
Query: 58 AVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRH 117
++ + ++ L+ + + K V + VPGEGEHKI +R + H
Sbjct: 149 KIVDSEISNWLALK-TEEGFFGKCMVTYNGVTVPGEGEHKIFQCIRKMNKVCKRSRKDVH 207
Query: 118 CLYGLDADLIMLALATHEVHFSILRE-------VVFTPGQQDKCFLCGQPGHLAANCEGK 170
+YGLDADL+ML++A + +LRE VV ++ + + G + +
Sbjct: 208 LVYGLDADLMMLSMAVKMPNIKVLREERNYAPHVV--SKKKGEPYFSTDTGIVHLHKWDF 265
Query: 171 AKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREY---LDYEFRIPNPPFEIDLECIVDDFI 227
K F E + K+ Y+ + +R+Y P P+ I DDF+
Sbjct: 266 IDLKKTHF-EVASLHSLRKRMYERCWGYIMRKYGPSSSSFLNRPEAPYR-----ITDDFV 319
Query: 228 FMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAV 287
+ F GNDFLP +PT+++ + ++ Y G+LTDGSK + R++ +++
Sbjct: 320 LLSFLAGNDFLPRLPTVDLANDSFKQMLVTYYGLMHKWQGFLTDGSKIHVPRLQTLFKSL 379
Query: 288 GSYEDRIFQKRARL 301
+E F+++ +
Sbjct: 380 AKHEMEWFKEKGII 393
>gi|358389627|gb|EHK27219.1| hypothetical protein TRIVIDRAFT_207716 [Trichoderma virens Gv29-8]
Length = 904
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 78/117 (66%), Gaps = 10/117 (8%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + DA E+ R++ REG +LP + + FDSN ITPGTEFMA L
Sbjct: 60 MNQQRARRFRTALDA-------EKAREKAIREGIELPKE---EPFDSNCITPGTEFMAKL 109
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRH 117
S L+Y+++ +++ D W+ ++LS VPGEGEHKIM Y+R + P YDPN R+
Sbjct: 110 SQQLRYFVNKKVSEDTDWQGCDIVLSGHEVPGEGEHKIMEYIRNAKAQPNYDPNARN 166
>gi|281206450|gb|EFA80636.1| 5'-3' exoribonuclease [Polysphondylium pallidum PN500]
Length = 538
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/140 (46%), Positives = 90/140 (64%), Gaps = 11/140 (7%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
+NQQR RRF S E++ +Q+ EG+++P +F ITPGTEFM+ L
Sbjct: 354 LNQQRQRRFL-------SVFLEDKAKQKMISEGKEIP----EVIFSRTAITPGTEFMSNL 402
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
S LQ++I ++N D W ++++I S PGEGEHKI+ Y+R + P +DPN HCLY
Sbjct: 403 SDCLQFFIKKKINEDMSWREVEIIFSGPENPGEGEHKIIDYIRKNKASPDWDPNQSHCLY 462
Query: 121 GLDADLIMLALATHEVHFSI 140
GLDADLI+LAL THE HF++
Sbjct: 463 GLDADLILLALVTHEPHFNL 482
>gi|123428648|ref|XP_001307542.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
gi|121889177|gb|EAX94612.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
Length = 498
Score = 110 bits (275), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 131/286 (45%), Gaps = 70/286 (24%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
++QQRSRR+ S + DS+ FD + + PGTEFM L
Sbjct: 91 ISQQRSRRYAYSANYQDSS-------------------------FDLSNVFPGTEFMINL 125
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 120
+ L+ + ++ ND W K K+ SD PGEGEHKI+ ++R N P Y + +Y
Sbjct: 126 NKLLESQLLNKITNDEIWSKAKLYYSDVFCPGEGEHKIVDFIRSISNDPEYSHSEWSYIY 185
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
+D D+I LAL+ H ++S+ +F P +
Sbjct: 186 TVDTDVIFLALSIHNPNYSL----IFEP-------------------------------Q 210
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
G + Y +HI ++REY+ +F P + D E I+DD++F+ F NDF
Sbjct: 211 NGSQ-------YTVIHIDSIREYIFQQFE---PYCKPDFERIIDDYVFLSFLFKNDFFAG 260
Query: 241 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQA 286
LE + + ++ Y+ +ALGG++ +G+ ++ ++ FI++
Sbjct: 261 FKELEFCTQSKDTIITNYRAARKALGGFIVNGNDINIELLKKFIES 306
>gi|258597213|ref|XP_001347750.2| exonuclease, putative [Plasmodium falciparum 3D7]
gi|254832599|gb|AAN35663.2| exonuclease, putative [Plasmodium falciparum 3D7]
Length = 734
Score = 110 bits (274), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 77/132 (58%), Gaps = 6/132 (4%)
Query: 444 KFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQF 503
KF + P+E + ++V +Y EGL W +HYY+ G SW W YPYHYAP SDL ++
Sbjct: 576 KFGLEDPKEIQ----NIVKKYIEGLFWNLHYYHFGCASWYWEYPYHYAPLCSDLLSFEKS 631
Query: 504 NISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRY 563
+ FE G P+ F L+ V P + LP+ Y+ + + + F+P + ++D NGK+
Sbjct: 632 DFFFEKGKPYSAFTHLISVLPQKDKNLLPDAYKNIYVE--DEVKSFFPENVKIDPNGKKE 689
Query: 564 SWQGIAKLPFID 575
+W+ I LPFI+
Sbjct: 690 TWEYIVHLPFIN 701
Score = 82.8 bits (203), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 71/149 (47%), Gaps = 34/149 (22%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRF + D+ + S +F+ N IT GT+FM
Sbjct: 138 MNQQRKRRFLSIFKINDN--------------------DNTSNLFNPNCITTGTDFM--- 174
Query: 61 SIALQYYIHLRLNNDPGWE------KIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPN 114
Y I+L LN + VI S ++V GEGEHKI+ Y+R N
Sbjct: 175 -----YKINLSLNKWFKILKKKKVFEFDVIFSGSDVAGEGEHKILKYIRENCKRDSNFKN 229
Query: 115 TRHCLYGLDADLIMLALATHEVHFSILRE 143
HC+YGLDADLIML+L TH + ILR+
Sbjct: 230 YNHCIYGLDADLIMLSLVTHLNNIFILRD 258
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%)
Query: 222 IVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVE 281
+VDD +F+ F VGNDFLPH+P ++I EG++N ++ Y Y+T K + R++
Sbjct: 477 VVDDIVFLSFLVGNDFLPHIPNIDINEGSMNEILNSYIFYIYKYSNYITYKDKVHIERLK 536
Query: 282 HFIQAVGSYEDRIFQKR 298
++ + + E F+KR
Sbjct: 537 IILKILSAQEFEYFKKR 553
>gi|402589808|gb|EJW83739.1| hypothetical protein WUBG_05350 [Wuchereria bancrofti]
Length = 1134
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 66/97 (68%)
Query: 502 QFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGK 561
+ ++F+L PFKPF QLL V P+AS++ LP YR+LM D SPI DFYP F+ D+NGK
Sbjct: 26 EMEMNFDLNEPFKPFEQLLAVLPAASANCLPPPYRELMNDAKSPIIDFYPEQFDTDLNGK 85
Query: 562 RYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
+ W+ + +PFI+E RLL V + LT+E+ +RN
Sbjct: 86 KNDWEAVILIPFINEDRLLQAVAIKDSLLTDEDRQRN 122
>gi|389583613|dbj|GAB66347.1| 5'-3' exoribonuclease [Plasmodium cynomolgi strain B]
Length = 638
Score = 106 bits (265), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 87/173 (50%), Gaps = 26/173 (15%)
Query: 423 NPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSW 482
N E + E +K YY +KF + P++ + +V +Y EGL W +HYY+ G SW
Sbjct: 440 NAENVREFTDESRYKGYYYLQKFGLEDPKQIQH----IVNKYIEGLFWNLHYYHFGCASW 495
Query: 483 QWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDP 542
W YPYHYAP SDL ++ + FE G P+ + L+ V P ++ LPE Y+ + ++
Sbjct: 496 CWEYPYHYAPLCSDLLSFEKSDFFFEKGKPYSAYTHLISVLPQKDNNLLPEAYKNIYSE- 554
Query: 543 NSPISDFYPTDFEVDMNGKRY--------------------SWQGIAKLPFID 575
+ F+P + +D NGK+Y +W+ I LPFI+
Sbjct: 555 -DEVKSFFPENVRIDPNGKKYVLEEGAILTGLPPAQSPIGETWEYIVHLPFIN 606
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 77/145 (53%), Gaps = 26/145 (17%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRF + +D++ + + +F+ N IT GT+FM +
Sbjct: 89 MNQQRKRRFLSLFKVSDNS--------------------NGANLFNPNCITTGTDFMYKI 128
Query: 61 SIALQYYIHL--RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHC 118
++AL + + + N P VI S ++VPGEGEHKI+ ++R N HC
Sbjct: 129 NLALNKWFQILKKKNIFP----FDVIFSGSDVPGEGEHKILKFIRENCKRDAAFRNYNHC 184
Query: 119 LYGLDADLIMLALATHEVHFSILRE 143
+YGLDADLIML+L TH + ILR+
Sbjct: 185 IYGLDADLIMLSLVTHLNNIFILRD 209
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 222 IVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVE 281
+VDD +F+ F VGNDFLPH+P ++I EG++N ++ Y YLT K ++R++
Sbjct: 362 VVDDIVFLSFLVGNDFLPHIPNIDINEGSMNEILNAYIYYIYRYNNYLTLKDKVHIQRLK 421
Query: 282 HFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQAR 317
++ + + E F KR +AE ++ ++R
Sbjct: 422 IILKILSAQEFSYFLKRG-----NAENVREFTDESR 452
>gi|399218119|emb|CCF75006.1| unnamed protein product [Babesia microti strain RI]
Length = 759
Score = 105 bits (263), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 150/315 (47%), Gaps = 40/315 (12%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPP----KSDSQVFDSNVITPGTEF 56
+NQQR+RR R+S ER ++ L ++ +Q F N+I+PGTEF
Sbjct: 128 INQQRTRRNRSSIGNIQDQINPERFANIQKQLETVLSSCGDNRTSTQPFTPNMISPGTEF 187
Query: 57 MAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTR 116
+ L L+ ++ L++ ++ + V+ S ++VPGEGEHKI ++ L
Sbjct: 188 IVTLENELRKWLFLKV-SEGFFGNCDVVFSGSDVPGEGEHKIFQSIKSASRLSS------ 240
Query: 117 HCLYGLDADLIMLALATHEVHFSILREVV-FTPGQQDKCFLCGQPGHLAA----NCEGKA 171
+YGLDADL++LA T ILRE +TP H+AA N +
Sbjct: 241 -MVYGLDADLMLLASLTQGNKCIILREKRGYTP-------------HVAARRKPNPYYNS 286
Query: 172 KRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEID--------LECIV 223
F K D + + K+ ++ +++ + + Y + +I+ + +
Sbjct: 287 TTGLVHF-HKRDFLTLQKRHFELVNLKAVAMHF-YNRLVTKDKKKINYNGSEDDFVNSLT 344
Query: 224 DDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHF 283
DF+F+ F GNDFLP +P +++ + + + Y K F +GG++T+G S+ R + F
Sbjct: 345 RDFVFLTFLAGNDFLPRVPAVDLADESFTPFILSYFKNFDQIGGFITNGDSYSISRFKKF 404
Query: 284 IQAVGSYEDRIFQKR 298
++ ++E F+ R
Sbjct: 405 LEFPSTFEQNWFRLR 419
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 71/142 (50%), Gaps = 8/142 (5%)
Query: 436 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 495
+ + YY+ KF ++ E K +V Y GL W M YY W W Y +HYAP +
Sbjct: 433 YAKYYYKIKFGVDVTDQPEFI-KGLVNDYLTGLHWNMFYYNRSYSCWNWSYKHHYAPLLT 491
Query: 496 DL-KDLDQFNIS-FELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTD 553
D+ K +FN F+ G P LL V P ++ LPE R + ++ ++P+D
Sbjct: 492 DMCKYKYKFNKQMFKNGKPVSQLTHLLSVCPPEDNYLLPEQLRDI-----DELNQYFPSD 546
Query: 554 FEVDMNGKRYSWQGIAKLPFID 575
EVD +G W+ + K+PFID
Sbjct: 547 VEVDKDGYNNEWEYVVKMPFID 568
>gi|66804489|ref|XP_635977.1| hypothetical protein DDB_G0289921 [Dictyostelium discoideum AX4]
gi|60464324|gb|EAL62473.1| hypothetical protein DDB_G0289921 [Dictyostelium discoideum AX4]
Length = 1235
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 103/207 (49%), Gaps = 23/207 (11%)
Query: 420 NSDNPEEDKVKLGEPGWK---ERYYEEKFN--AKTPEEREETRKDVVLRYTEGLCWVMHY 474
NS + E + + P +K YY KF+ K ++ ++ D+ +YT GL WV+ Y
Sbjct: 748 NSTSNESSSIVMVPPEFKYDDLLYYRVKFDLIGKPDDQVKKLVDDMCYQYTLGLHWVLRY 807
Query: 475 YYEGVCSWQWFYPYHYAPFASDLKDL--------------DQFNISFELGHPFKPFNQLL 520
Y G +W W+YPYHYAP A DL + +QFN F+L P P L
Sbjct: 808 YVSGCQAWDWYYPYHYAPLAKDLLNYQKRLSKIQDREMVNNQFN--FKLSSPLPPLIHLA 865
Query: 521 GVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLL 580
V P S LP+ + ++ + NSP + Y D++ D NG+ +W+ I L F+D +
Sbjct: 866 SVLPRNSVAFLPDSMKHIVNE-NSPFTASYRDDYKYDFNGENVAWKAIVLLDFMDIEKFK 924
Query: 581 DEVKKI-EHTLTEEEARRNSIMADMLF 606
+ + I + LT+ E +RN I D+ F
Sbjct: 925 EYLLPIVNNELTDNEKKRNLIGNDIKF 951
Score = 99.8 bits (247), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 97/193 (50%), Gaps = 14/193 (7%)
Query: 3 QQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSI 62
+QR RRF++SK+ D ++ L+ + + R + S +FDSN I+P TEF+ +
Sbjct: 125 EQRKRRFKSSKETVDVIIKQ--LKSKSKPITRDSIIEQFSLIFDSNSISPATEFIEKVDD 182
Query: 63 ALQYYI-HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYG 121
++ Y L L + + +ILSD+ VPGEGEHKIM Y+R + D HC YG
Sbjct: 183 WIKDYCKQLSLKR----QNLSIILSDSTVPGEGEHKIMDYIRQNHPILKKD-GMSHCFYG 237
Query: 122 LDADLIMLALATHEVHFSILREVVFTPGQQDKCFLC-GQPGHLAANCEGKAKRKAGEFDE 180
+DADLI L L +H +F ILR+ P C C H C K +F +
Sbjct: 238 MDADLIFLGLESHLSNFYILRD----PISLISCSTCKANDDHSNYECRSAIALKK-QFQK 292
Query: 181 KGDEVVVPKKPYQ 193
K V+V P Q
Sbjct: 293 KSTSVIVRGIPNQ 305
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 192 YQFLHIWTLREYLDYEF--RIPNPPFE-IDLECIVDDFIFMCFFVGNDFLPHMPTLEIRE 248
+ +++I + R YL+Y F +I E I+ +++DF +CF++GNDFLPH+P++ I+
Sbjct: 616 FDYVNIDSFRTYLEYYFFEKIEKSKREKINFNRVINDFTVLCFYLGNDFLPHLPSVGIQS 675
Query: 249 GAINLLMAVYKK 260
G+I L+M Y++
Sbjct: 676 GSIELIMCWYRE 687
>gi|290992975|ref|XP_002679109.1| 5'-3' exoribonuclease [Naegleria gruberi]
gi|284092724|gb|EFC46365.1| 5'-3' exoribonuclease [Naegleria gruberi]
Length = 1047
Score = 102 bits (255), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 120/250 (48%), Gaps = 27/250 (10%)
Query: 457 RKDVVLRYTEGLCWVMHYY-YEGVCSWQWFYPYHYAPFASDLKDL-DQFN-------ISF 507
RK +V Y G+ W +YY Y SW W YP HYAP D+ D D+ N +F
Sbjct: 544 RKTLVKEYLRGIVWAFNYYSYNDPPSWYWRYPEHYAPVMCDILDCYDEINDEYIKDITTF 603
Query: 508 ELGHPFKPFNQLLGVFPSASSHA-LPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQ 566
E G P + QL+ + P S A LP+ Y ++ +P + F+P +FE D N ++
Sbjct: 604 EKGEPLTAYQQLISILPKESMEACLPKTYTDILNNPK--LDKFFPKEFEKDGNFSGIVYK 661
Query: 567 GIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQ 626
++ LP ID + + K+I+ L+EEE+R+N D+++ + ++ + TL+
Sbjct: 662 AVSLLPSIDLDLVKNITKEIDPLLSEEESRKNKFGIDVIYTAVDSEVNKKLSTLE----- 716
Query: 627 LKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSPVASME---DIMGNQVLCAIY 683
++VE +E+ + ++G S D + VF S V + E + +
Sbjct: 717 ----DKVEKEEKFKGD-DTLLSGVFSKI--DTNEMVFGSEVVASELKASVAAYKFSTPTV 769
Query: 684 KLPDAHKHVT 693
+ DA+K VT
Sbjct: 770 PIQDAYKFVT 779
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 147/348 (42%), Gaps = 74/348 (21%)
Query: 3 QQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPK-SDSQV----------------- 44
QQR RRF A + R++ E +E +L + +S+V
Sbjct: 112 QQRHRRFVAISENEQKLKFIGRIQSEITKEKDELTKEIKESEVDKIQQREKLLDSAIARM 171
Query: 45 ------FDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKI 98
+D NVI+PGT FM + L P IKVI+SD++VPGEGEHKI
Sbjct: 172 EAKKNHWDHNVISPGTPFMMKCMSTVHQAAKLIATEFPH---IKVIVSDSSVPGEGEHKI 228
Query: 99 MSYVRLQRNLPGYD-PNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLC 157
+SY++ ++ + + H ++GLDADLIML ++ P K F
Sbjct: 229 LSYMKREKAINSKEFSEMLHVVHGLDADLIMLT------------SLIGLP----KIFSY 272
Query: 158 GQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEI 217
++ N K E V+ L + + +D+ N F
Sbjct: 273 RDSENVRMNKRDKELFNISELGRHFARVIYS--SIAELDTSSKSQNIDW----SNANFVS 326
Query: 218 DLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKK------EFRALGG---- 267
D+ + + FVGNDFLP++P+L + A +++M Y K E LG
Sbjct: 327 DV-------VLLLMFVGNDFLPNVPSLVMHNHAASIIMYSYAKYLLQCMEESGLGDNFDP 379
Query: 268 ---YLTDGSKPSLRRVEHFIQAVGSY-EDRIFQKRARLHQ---RHAER 308
YL D + S+ +++ I+A+ S E+ + A+L+ RH +R
Sbjct: 380 RPHYLVDYTNSSMINIKNMIKAMQSIREESVIGMFAKLYHSTIRHYQR 427
>gi|407040580|gb|EKE40208.1| 5'-3' exonuclease domain containing protein [Entamoeba nuttalli
P19]
Length = 628
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 145/290 (50%), Gaps = 39/290 (13%)
Query: 42 SQVFDSNVITPGTEFMAVLSIALQYYIHLRLNND--PGWEKIKVILSDANVPGEGEHKIM 99
+ + N ITPGTE M +S+ ++ +I ++NN W +IKVI+S +VPGEGEHKI+
Sbjct: 106 TDCLEGNAITPGTELMEKISVGIESFILNQMNNKGLDYWRRIKVIVSGVHVPGEGEHKII 165
Query: 100 SYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQ 159
Y+R Q + N H +YG DADL++L+L H ILR+ T DK +
Sbjct: 166 EYIRSQERI-----NESHVIYGEDADLLLLSLVLHYDSIFILRKD--TRQIFDKNKKGSK 218
Query: 160 PGHLAANCEGKAKRKAGE-------------------FDEKGDEVVVPKKPYQFLHIWTL 200
P A N GK+K + F DE ++ P++F +I +
Sbjct: 219 P---ARNGTGKSKVMKDKIKKVENEKIEKEKKELKKVFGSDDDEFLI---PFEFANISLI 272
Query: 201 -REYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYK 259
++ L+ + N ++LE +DFI++ GNDFLP++ ++I GA+N ++ +Y
Sbjct: 273 SKKLLELSSQYENSIERLELE---NDFIYLMSIAGNDFLPNIEGIDIYAGALNTVLNIY- 328
Query: 260 KEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 309
+ + G +T+ K + V F + +E R+ + + + + A+ I
Sbjct: 329 FQLHSKGIKITENGKVNNNGVLAFFTELAQHEQRLIESQMKTRRGSAQPI 378
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 86/182 (47%), Gaps = 10/182 (5%)
Query: 429 VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPY 488
+KLG+ G+KERY + F K EE KD V Y EG+ WV +YY SW+W Y
Sbjct: 390 IKLGQSGYKERYVQTYFMNK-----EEYIKDSVKSYLEGMNWVFNYYCGNAFSWKWGYKC 444
Query: 489 HYAPFASDLKDLDQ---FNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 545
HYAP D Q E P P QL+ V P S H +P+ +++ P
Sbjct: 445 HYAPLLCHFVDYFQPVELTTIAEDDGPIHPIEQLIAVLPPKSIHLIPKQLQEIYNLP--E 502
Query: 546 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 605
P +D +G+ S++GIA + F D + + V+ L + E RN + ++L
Sbjct: 503 FKKTIPEHVIIDAHGQDVSYKGIALVGFPDISLIHQYVEDHIKELNKLEVIRNQLSQEVL 562
Query: 606 FV 607
FV
Sbjct: 563 FV 564
>gi|67466759|ref|XP_649521.1| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
gi|56465985|gb|EAL44135.1| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
gi|449704666|gb|EMD44867.1| 5'3' exonuclease domain containing protein [Entamoeba histolytica
KU27]
Length = 628
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 145/290 (50%), Gaps = 39/290 (13%)
Query: 42 SQVFDSNVITPGTEFMAVLSIALQYYIHLRLNND--PGWEKIKVILSDANVPGEGEHKIM 99
+ + N ITPGTE M +S+ ++ +I ++NN W +IKVI+S +VPGEGEHKI+
Sbjct: 106 TDCLEGNAITPGTELMEKISVGIESFILNQMNNKGLDYWRRIKVIVSGVHVPGEGEHKII 165
Query: 100 SYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQ 159
Y+R Q + N H +YG DADL++L+L H ILR+ T DK +
Sbjct: 166 EYIRSQERI-----NESHVIYGEDADLLLLSLVLHYDSIFILRKD--TRQIFDKNKKGSK 218
Query: 160 PGHLAANCEGKAKRKAGE-------------------FDEKGDEVVVPKKPYQFLHIWTL 200
P A N GK+K + F DE ++ P++F +I +
Sbjct: 219 P---ARNGTGKSKVMKDKIKKVENEKIEKEKKELKKVFGSDDDEFLI---PFEFANISLI 272
Query: 201 -REYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYK 259
++ L+ + N ++LE +DFI++ GNDFLP++ ++I GA+N ++ +Y
Sbjct: 273 SKKLLELSSQYENSIERLELE---NDFIYLMSIAGNDFLPNIEGIDIYAGALNTVLNIY- 328
Query: 260 KEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 309
+ + G +T+ K + V F + +E R+ + + + + A+ I
Sbjct: 329 FQLHSKGIKITENGKVNNNGVLAFFTELAQHEQRLIESQMKTRRGSAQPI 378
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 87/182 (47%), Gaps = 10/182 (5%)
Query: 429 VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPY 488
+KLG+ G+KERY + F K EE KD V Y EG+ WV +YY SW+W Y
Sbjct: 390 IKLGQSGYKERYVQTYFMNK-----EEYIKDSVKSYLEGMNWVFNYYCGNAFSWKWGYKC 444
Query: 489 HYAPFASDLKDLDQ---FNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 545
HYAP D Q F E P P QL+ V P S H +P+ +++ P
Sbjct: 445 HYAPLLCHFVDYFQPVEFTTIAEDDGPIHPIEQLIAVLPPKSIHLIPKQLQEIYNLP--E 502
Query: 546 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 605
P +D +G+ S++GIA + F D + + V+ L + E RN + ++L
Sbjct: 503 FKKTIPEQVIIDAHGQDVSYKGIALVGFPDISLIHQYVESHIKELNKLEVIRNQLSQEVL 562
Query: 606 FV 607
FV
Sbjct: 563 FV 564
>gi|328869830|gb|EGG18205.1| hypothetical protein DFA_03692 [Dictyostelium fasciculatum]
Length = 1061
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 91/182 (50%), Gaps = 17/182 (9%)
Query: 440 YYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDL-- 497
YY+ K A T E E ++ V Y GL WV+ YY G W+W Y +HYAP A+DL
Sbjct: 814 YYKLKLQASTSE-VENVKQWVCQSYVRGLSWVLKYYTVGCPDWKWSYNFHYAPLAADLAA 872
Query: 498 --KDL-------DQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISD 548
K++ D +I F+LG P +P LL V P S LP LM + +S
Sbjct: 873 YCKEMVVGKGFKDTSHIEFKLGAPLQPLAHLLSVLPVYSGKFLPAPLADLM--KSKQLST 930
Query: 549 FYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE---ARRNSIMADML 605
FY + +D+NG+ SW+G+ + FID + L I L++ + A+ N + D+
Sbjct: 931 FYRERYRIDLNGEEVSWKGVVLVNFIDVSALESLANPIAEQLSKNDPHIAQLNKLGNDIY 990
Query: 606 FV 607
++
Sbjct: 991 YL 992
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 76/142 (53%), Gaps = 8/142 (5%)
Query: 43 QVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYV 102
+VFDSN I+P TEFM ++ + YI L + V+LSD VPGEGEHKIM ++
Sbjct: 213 KVFDSNSISPATEFMNKVNHWIGEYISTVLAKSH--PHLAVVLSDTTVPGEGEHKIMDFI 270
Query: 103 RLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGH 162
R N + +T H YG+DADLI L L+ H F +LR+ C +C H
Sbjct: 271 R--GNHKNWSESTSHIFYGMDADLIFLGLSVHLQRFFVLRDF---QSLSYGCSICKSEYH 325
Query: 163 LAANCEGK-AKRKAGEFDEKGD 183
++ C+ A +K +++GD
Sbjct: 326 MSYECKSALAMKKLHASNKEGD 347
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 73/136 (53%), Gaps = 10/136 (7%)
Query: 183 DEVVVPKKPYQFLHIWTLREYLDY--EFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
DE + ++ ++F+++ LR+Y+ Y F + N ++D+ ++D MC +GNDFLPH
Sbjct: 630 DEYLTVERKFEFVNLDNLRQYIKYYLTFGLENES-QLDINNCINDITVMCMLMGNDFLPH 688
Query: 241 MPTLEIREGAINLLMAVYK----KEFRALG--GYLTDGSKPSLRRVEHFIQAVGSYEDRI 294
+P + I++G+I L++ YK ++ G YLT + + +G++E I
Sbjct: 689 LPAVSIKDGSIELILGWYKDWIHNSIKSTGKVNYLTVDTNIIYSNFSELLNVLGNWESVI 748
Query: 295 F-QKRARLHQRHAERI 309
+ K R+ ++ R+
Sbjct: 749 YPDKLERMGKKDLARL 764
>gi|261328233|emb|CBH11210.1| 5'-3' exonuclease, putative [Trypanosoma brucei gambiense DAL972]
Length = 1036
Score = 100 bits (248), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 68/105 (64%), Gaps = 1/105 (0%)
Query: 45 FDSNVITPGTEFMAVLSIALQYYIHLRLN-NDPGWEKIKVILSDANVPGEGEHKIMSYVR 103
FDSN I+PGT+FMA +S A+ ++ +++ NDP W ++ VI S +N PGEGEHKI+ ++R
Sbjct: 226 FDSNCISPGTDFMAKVSDAVLNMLNEKMSGNDPTWTRLCVIFSGSNTPGEGEHKIIDFLR 285
Query: 104 LQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTP 148
Q +L + H + GLDADLI LAL+ H ILR+ P
Sbjct: 286 TQSSLAQFGGKANHVIVGLDADLIFLALSLHITQVFILRDTTRNP 330
Score = 46.2 bits (108), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 3/114 (2%)
Query: 222 IVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDG-SKPSLRRV 280
I+DD I + +GNDFLPH P+ E A++ L+ +Y E G+LT G + +L ++
Sbjct: 510 IIDDIIVLSILLGNDFLPHAPSAFSGESALDNLLELYVSEVLPY-GFLTKGPHEINLPQL 568
Query: 281 EHFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPV 334
+ +A E F +R L + + A+ R+G + + + D V +
Sbjct: 569 QRLFEAYAKIEAVKF-RRFLLFKSTNKENSNSGAEFRKGSNNDNVTVADVAVAL 621
Score = 40.0 bits (92), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 73/189 (38%), Gaps = 18/189 (9%)
Query: 436 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLC--WVMHYYYEGVCSWQWFYPYHYAPF 493
W++ Y + + + +E E +Y EG+C W + W W+YP+++AP
Sbjct: 629 WRDTYLKSTGLSNSVQEACE-------KYVEGVCFVWRYYTTTTTDSDWSWYYPFYHAPP 681
Query: 494 ASDL------KDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDP--NSP 545
DL ++ + + P QLL + P S LP ++M +
Sbjct: 682 VIDLAIYLKEANIKRMPLPVVKSTPPDTLVQLLSILPPTSHALLPMVLGEVMVRSPQQAE 741
Query: 546 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 605
+ +P + VD + LPF D L V LTEEE R + D
Sbjct: 742 LESTFPLQWNVDYHDSNVVHLATVMLPFADMDVLQQVVDAAWPQLTEEERWRTQKL-DFH 800
Query: 606 FVLLSHPLS 614
V+ S+ S
Sbjct: 801 LVITSNKTS 809
>gi|71407725|ref|XP_806311.1| 5'-3' exonuclease XRNB [Trypanosoma cruzi strain CL Brener]
gi|70870021|gb|EAN84460.1| 5'-3' exonuclease XRNB, putative [Trypanosoma cruzi]
Length = 979
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 66/100 (66%), Gaps = 1/100 (1%)
Query: 45 FDSNVITPGTEFMAVLSIALQYYIHLRLNN-DPGWEKIKVILSDANVPGEGEHKIMSYVR 103
FDSN I+PGT FM ++ A+ + +L N DP W ++V+ S AN PGEGEHKI+ ++R
Sbjct: 204 FDSNCISPGTAFMVKVTNAILTMVQDKLTNGDPLWAGLRVVFSGANTPGEGEHKIVDFLR 263
Query: 104 LQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILRE 143
Q + PG++ H + GLDADLI L+L+ H H +LR+
Sbjct: 264 TQSSYPGFNGKGAHVIAGLDADLIFLSLSLHIPHILLLRD 303
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 73/146 (50%), Gaps = 13/146 (8%)
Query: 463 RYTEGLCWVMHYYY--EGVCSWQWFYPYHYAPFASDLKD-LDQFNISFELGHPFKP---- 515
+Y EGL +V YY CSW W+YP+H+APFA D+ D L + +++ P +
Sbjct: 592 KYVEGLRFVWRYYSGNASTCSWSWYYPFHHAPFALDIADYLQRCDLTNLPSPPLETTPPD 651
Query: 516 -FNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMN---GKRYSWQGIAKL 571
F QLL + P S LP +M +P + + +P+ + VD GK Y + + L
Sbjct: 652 MFLQLLCILPPTSHALLPAVLGDVMLNPPEELRETFPSMWRVDYTAAYGKDYLAEVL--L 709
Query: 572 PFIDEARLLDEVKKIEHTLTEEEARR 597
PF + + L + V+ T+EE R
Sbjct: 710 PFANVSELRELVESSRPYFTKEEQER 735
>gi|302853934|ref|XP_002958479.1| hypothetical protein VOLCADRAFT_108142 [Volvox carteri f.
nagariensis]
gi|300256207|gb|EFJ40479.1| hypothetical protein VOLCADRAFT_108142 [Volvox carteri f.
nagariensis]
Length = 1602
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 76/123 (61%), Gaps = 2/123 (1%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFERE--GRKLPPKSDSQVFDSNVITPGTEFMA 58
MNQQR+RRF ++ A + E +R E + G + P + S FD N+I+ GT FM+
Sbjct: 124 MNQQRTRRFLSAHVAEVTDHVEREVRAEMTSQAGGSRTIPDTSSSRFDPNIISIGTVFMS 183
Query: 59 VLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHC 118
++ ++ + ++ DP + +++VI+SD+ P EGEHKIM ++R R P YDPNTRH
Sbjct: 184 RVADRVRAMLRTKVQTDPRFTQLRVIVSDSYEPAEGEHKIMRFIRHLRTRPEYDPNTRHI 243
Query: 119 LYG 121
+YG
Sbjct: 244 IYG 246
Score = 44.7 bits (104), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 234 GNDFLPHMPTLEIRE--GAINLLMAVYKKEFRALGGYLTDG-SKPSLRRVEHFIQAVGSY 290
GNDFLPH+P+++I + + LLM YK+ + G +T G + + R+ +
Sbjct: 471 GNDFLPHVPSIDIYDLPSGLELLMVSYKELLPQMKGCITQGVGQINATRLTQLFNKLARD 530
Query: 291 EDRIFQKRARLHQRHAERIK 310
E+ F +RA L R + + K
Sbjct: 531 EEAAFVRRAALAARGSRKTK 550
>gi|15078725|ref|NP_149475.1| 012L [Invertebrate iridescent virus 6]
gi|82013011|sp|Q9QSK5.1|EXON_IIV6 RecName: Full=Putative exonuclease 012L
gi|5725643|gb|AAD48147.1|AF083915_1 012L [Invertebrate iridescent virus 6]
Length = 624
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 118/305 (38%), Gaps = 99/305 (32%)
Query: 3 QQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSI 62
QQR RRF A+ D E F + K ++ FDSN I+PGTEFM L
Sbjct: 101 QQRQRRFLAAHDRKKPGTE-------FNFDCNK----GNTSKFDSNSISPGTEFMHNLGR 149
Query: 63 ALQYYIHLRLNNDPG------------------------------WEKIKVILSDANVPG 92
+ IH++ P W + V+ ++ V G
Sbjct: 150 YID--IHIKKKQKPAFTGRETTDAPQNNWRNKDQSWRQKVDDTAEWSNLTVVFANDKVSG 207
Query: 93 EGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML---ALATHEV-HFSILREVVFTP 148
EGEHK++ Y+R N +C+YG DADLIML AL T + + +LR+ +P
Sbjct: 208 EGEHKLLDYIRKYGN-----SYYTYCIYGSDADLIMLSMSALTTTAIKNIYVLRDEYKSP 262
Query: 149 GQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEF 208
L P + + + DEK
Sbjct: 263 NY----LLINIPNFVKNLIKDVKSNWTDKLDEKR-------------------------- 292
Query: 209 RIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGY 268
++DFIFMCF VGNDFLPH+P++EI I ++A Y K Y
Sbjct: 293 -------------FINDFIFMCFMVGNDFLPHIPSIEIMTNGIESMLAFYTKN----KNY 335
Query: 269 LTDGS 273
+TD +
Sbjct: 336 ITDNN 340
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 102/256 (39%), Gaps = 65/256 (25%)
Query: 390 ENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKT 449
E S + N E F+ +LL S ++ ++ V + E ++E+Y ++ F
Sbjct: 362 EQSLCNEKVNNSEYFR---DDLLESSSFLVTNEFGQQKCVNINE--YREKYMKKHF---- 412
Query: 450 PEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDL------------ 497
E+ + L Y EG+ WV+ YY V W+W Y Y YAP + +
Sbjct: 413 -----ESSSEASLMYLEGMQWVLSYYTLKVPDWEWSYKYDYAPNLTSIIEAMSFKQIGGT 467
Query: 498 --KDLDQFNI-------SFELGHPFKPFNQLLG-VFPSA--------------SSHALPE 533
K+ +Q+ + S E+ F + VF ++ SS A+P
Sbjct: 468 SKKEKNQYKLFPVNSVNSTEVATSSSGFQKSFSMVFQNSLQNTKDWRDKKTKTSSDAIPP 527
Query: 534 HYRKLMTDP---------------NSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEAR 578
++ L P + + + P + +D GKR W+GI LP +D+
Sbjct: 528 FHQLLFILPPDSSDLLPYPLCEALTNELKIYAPKELIIDRAGKRQEWEGIVLLPKLDQKV 587
Query: 579 LLDEVKKIEHTLTEEE 594
+ + K + +TE++
Sbjct: 588 VTECYLKYKPYVTEKK 603
>gi|71425179|ref|XP_813034.1| 5'-3' exonuclease XRNB [Trypanosoma cruzi strain CL Brener]
gi|70877881|gb|EAN91183.1| 5'-3' exonuclease XRNB, putative [Trypanosoma cruzi]
Length = 1068
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 66/100 (66%), Gaps = 1/100 (1%)
Query: 45 FDSNVITPGTEFMAVLSIALQYYIHLRL-NNDPGWEKIKVILSDANVPGEGEHKIMSYVR 103
FDSN I+PGT FM ++ A+ + +L N DP W ++V+ S AN PGEGEHKI+ ++R
Sbjct: 293 FDSNCISPGTAFMVKVTNAILTMVQDKLANGDPLWAGLRVVFSGANTPGEGEHKIVDFLR 352
Query: 104 LQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILRE 143
Q + PG++ H + GLDADLI L+L+ H H +LR+
Sbjct: 353 TQSSYPGFNGKGAHVIAGLDADLIFLSLSLHIPHILLLRD 392
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 67/146 (45%), Gaps = 13/146 (8%)
Query: 463 RYTEGLCWVMHYYY--EGVCSWQWFYPYHYAPFASDLK------DLDQFNISFELGHPFK 514
+Y EGL +V YY CSW W YP+H+APFA D+ DL P
Sbjct: 681 KYVEGLRFVWRYYSGNASTCSWSWHYPFHHAPFALDIADYLQRCDLTNLPPPPLETTPPD 740
Query: 515 PFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMN---GKRYSWQGIAKL 571
F QLL + P S LP +M +P + + +P+ + VD GK Y + + L
Sbjct: 741 MFLQLLCILPPTSHALLPAVLGDVMLNPPEELRETFPSMWRVDYTAAYGKDYLAEVL--L 798
Query: 572 PFIDEARLLDEVKKIEHTLTEEEARR 597
PF + + L + V+ T+EE R
Sbjct: 799 PFANVSALREVVESSRPYFTKEEQER 824
>gi|167379332|ref|XP_001735097.1| 5'->3' exoribonuclease [Entamoeba dispar SAW760]
gi|165903060|gb|EDR28720.1| 5'->3' exoribonuclease, putative [Entamoeba dispar SAW760]
Length = 628
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 140/287 (48%), Gaps = 33/287 (11%)
Query: 42 SQVFDSNVITPGTEFMAVLSIALQYYIHLRLNND--PGWEKIKVILSDANVPGEGEHKIM 99
+ + N ITPGTE M +S ++ +I ++NN W ++KVI+S +VPGEGEHKI+
Sbjct: 106 TDCLEGNAITPGTELMEKISTGIESFILNQMNNKGLDYWRRVKVIVSGVHVPGEGEHKII 165
Query: 100 SYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQ 159
Y+R Q N H +YG DADL++L+L H ILR+ T DK +
Sbjct: 166 EYIRSQER-----TNESHVIYGEDADLLLLSLVLHYDSIFILRKD--TRQIFDKSKKGSK 218
Query: 160 PGH-------------LAANCEGKAKRK---AGEFDEKGDEVVVPKKPYQFLHIWTLREY 203
P E AK K F DE ++ P++F +I + +
Sbjct: 219 PARNGIGKSKVIKDKIKKIENEKVAKEKKELKKVFGSDDDEFLI---PFEFANISLISKR 275
Query: 204 L-DYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEF 262
L + + NP ++LE +DFI++ GNDFLP++ ++I GA+N +++ Y +
Sbjct: 276 LSELSSQYGNPIERLELE---NDFIYLMSIAGNDFLPNIEGIDIYAGALNTVLSTY-FQL 331
Query: 263 RALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 309
+ G +T+ K + V F + YE ++ + + + + A+ I
Sbjct: 332 HSKGIKITENGKVNNNGVHTFFIELVQYEQKLIENQMKTRRGSAQPI 378
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 90/188 (47%), Gaps = 12/188 (6%)
Query: 429 VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPY 488
+KLG+ G+KERY + F K EE KD V Y EG+ WV +YY SW+W Y
Sbjct: 390 IKLGQSGYKERYVQTYFMNK-----EEYIKDTVKSYLEGMNWVFNYYCGNTFSWKWGYKP 444
Query: 489 HYAPFASDLKD----LDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNS 544
HYAP D ++ I+ + G P P QL+ V P S H +P+ + + P
Sbjct: 445 HYAPLLCHFVDYFQPIEVTTIAEDDG-PVHPIEQLIAVLPPKSIHLIPKPLQAIYNLPE- 502
Query: 545 PISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADM 604
P +D++G+ S++G + F D + + V++ L + E RN + ++
Sbjct: 503 -FKKTIPEHVIIDVHGQDVSYKGTPLVGFPDISLIHQYVEEHIKELNKLELIRNQLSQEV 561
Query: 605 LFVLLSHP 612
LFV P
Sbjct: 562 LFVYYKIP 569
>gi|330804007|ref|XP_003289991.1| hypothetical protein DICPUDRAFT_80750 [Dictyostelium purpureum]
gi|325079889|gb|EGC33468.1| hypothetical protein DICPUDRAFT_80750 [Dictyostelium purpureum]
Length = 1065
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 97/190 (51%), Gaps = 13/190 (6%)
Query: 3 QQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSI 62
+QR RRF++ K++ + E + + + + + S+VFDSN I+P TEF+ ++
Sbjct: 100 EQRRRRFKSVKESKANILTELKKSKPYVSDEE--LSEIQSKVFDSNSISPATEFIEKINQ 157
Query: 63 ALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQ--RNLPGYDPNTRHCLY 120
++ Y P + ++LSD+ VPGEGEHKIM Y+R + + + HC Y
Sbjct: 158 WIKEYCEKLSTERPS---LTIVLSDSTVPGEGEHKIMDYIRSNHSKLIATGEKQLTHCFY 214
Query: 121 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
G+DADLI L L TH +F ILR+ + +C C HL+ C+ K
Sbjct: 215 GMDADLIFLGLETHLPNFYILRDSL----HLLECKTCDSKDHLSYECKSAYAIKKSLI-- 268
Query: 181 KGDEVVVPKK 190
K VVV K+
Sbjct: 269 KKSTVVVLKQ 278
Score = 48.5 bits (114), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 192 YQFLHIWTLREYLDYEFRIPNPPFE----IDLECIVDDFIFMCFFVGNDFLPHMPTLEIR 247
+ F+++ + R YL+Y + + N E +D ++D +C +GNDF+PH+P+ I
Sbjct: 603 FDFVNLDSFRLYLEY-YLLENIDQERREKVDFNRCINDITLLCTLLGNDFVPHLPSFLIS 661
Query: 248 EGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEH 282
G++ L + YK + +T + SL V +
Sbjct: 662 FGSLELTLCWYKDWIQKSIETITKDNSQSLHYVTN 696
>gi|407838780|gb|EKG00159.1| 5'-3' exonuclease XRNB, putative,exoribonuclease 2, putative
[Trypanosoma cruzi]
Length = 1070
Score = 96.7 bits (239), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 64/100 (64%), Gaps = 1/100 (1%)
Query: 45 FDSNVITPGTEFMAVLSIALQYYIHLRL-NNDPGWEKIKVILSDANVPGEGEHKIMSYVR 103
FDSN I+PGT FM + A+ + +L N DP W ++V+ S AN PGEGEHKI+ ++R
Sbjct: 295 FDSNCISPGTAFMVKVKNAILTMVQDKLANGDPLWAGLRVVFSGANTPGEGEHKIIDFLR 354
Query: 104 LQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILRE 143
Q + PG++ H + GLDADLI L L+ H H +LR+
Sbjct: 355 TQSSYPGFNGKGAHVIAGLDADLIFLLLSLHIPHILLLRD 394
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 67/146 (45%), Gaps = 13/146 (8%)
Query: 463 RYTEGLCWVMHYYY--EGVCSWQWFYPYHYAPFASDLK------DLDQFNISFELGHPFK 514
+Y EGL +V YY CSW W YP+H+APFA D+ DL P
Sbjct: 683 KYVEGLRFVWRYYSGNASTCSWSWHYPFHHAPFALDIADYLQRCDLTNLPPPPLETTPPD 742
Query: 515 PFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMN---GKRYSWQGIAKL 571
F QLL + P S LP +M +P + + +P+ + VD GK Y + + L
Sbjct: 743 MFLQLLCILPPTSHALLPAVLGDVMLNPPEELRETFPSMWRVDYTAAYGKDYLAEVL--L 800
Query: 572 PFIDEARLLDEVKKIEHTLTEEEARR 597
PF + + L + V+ T+EE R
Sbjct: 801 PFANVSELRELVESSRPYFTKEEQER 826
>gi|145552344|ref|XP_001461848.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429684|emb|CAK94475.1| unnamed protein product [Paramecium tetraurelia]
Length = 920
Score = 96.7 bits (239), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 83/156 (53%), Gaps = 18/156 (11%)
Query: 437 KERYYEEKFNAKTPEERE-ETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 495
++ YY+ K EE + + +D+ + Y EG+ +V+ YY++GV SW+W+Y Y+YAP
Sbjct: 25 RKLYYKAKCQITQGEELDLQKLEDMCINYMEGIYFVLQYYFKGVPSWEWYYHYYYAPLCG 84
Query: 496 D-----------LKDLDQFNISFELGHPFKPFNQLL-GVFPSASSHALPEHYRKLMTDPN 543
D L D +Q I F P+ PF QLL + ++ LPE Y KL+TD
Sbjct: 85 DIVGVVSQIVQQLSDQEQ-PIIFTKDKPYPPFKQLLPSILTPENAMLLPEPYGKLLTDKE 143
Query: 544 SPI----SDFYPTDFEVDMNGKRYSWQGIAKLPFID 575
+ I D+YP FE D G Y Q I K+PF+D
Sbjct: 144 NSILRTPIDYYPESFETDSYGTMYEHQHITKIPFLD 179
>gi|83317922|ref|XP_731370.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23491393|gb|EAA22935.1| very similar to mouse Dhm1 and Dhm2-related [Plasmodium yoelii
yoelii]
Length = 387
Score = 96.3 bits (238), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 71/130 (54%), Gaps = 6/130 (4%)
Query: 433 EPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAP 492
E +K YY KF +E ++ +V +Y EGL W +HYY+ G SW W YPYHYAP
Sbjct: 264 EKKYKSYYYFHKFGVSDSKEIQQ----IVKKYIEGLFWNLHYYHFGCASWHWEYPYHYAP 319
Query: 493 FASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPT 552
SDL ++ + FE G P+ + L+ V P + LP+ Y+ + + + F+P
Sbjct: 320 LCSDLLSFEKSDFFFEKGKPYSAYTHLISVLPQKDKNLLPDPYKNVYAE--DEVKSFFPD 377
Query: 553 DFEVDMNGKR 562
+ ++D NGK+
Sbjct: 378 NVKIDPNGKK 387
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 69/141 (48%), Gaps = 12/141 (8%)
Query: 166 NCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLRE--------YLDYEFRIPNPPFEI 217
NC K + ++ DE+ ++ L I+ LR Y++ + N F I
Sbjct: 116 NCFNKTHKYTHDYYLHYDEL--NSYDFEILDIYKLRSSIKTQIATYINKLKKEKNIIFSI 173
Query: 218 DLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSL 277
+ +VDD +F+ F VGNDFLPH+P ++I EG++N + Y Y+T K +
Sbjct: 174 NR--VVDDIVFLSFLVGNDFLPHIPNIDINEGSMNEIFNSYIFYIYKYSNYITYKDKVHI 231
Query: 278 RRVEHFIQAVGSYEDRIFQKR 298
R++ ++ + E + F+KR
Sbjct: 232 ERLKIVLKILSGQEFQYFKKR 252
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 35/74 (47%)
Query: 114 NTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKR 173
N HC+YGLDADLIML+L TH + ILR+ + + + ++
Sbjct: 10 NWNHCIYGLDADLIMLSLVTHLNNIFILRDKFKLTNDSIHNNVVDNIEKMQSEFNVNSES 69
Query: 174 KAGEFDEKGDEVVV 187
+GE D EV +
Sbjct: 70 DSGEVDSSEREVTI 83
>gi|407400385|gb|EKF28636.1| 5'-3' exonuclease XRNB, putative,exoribonuclease 2, putative,
partial [Trypanosoma cruzi marinkellei]
Length = 1026
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 67/100 (67%), Gaps = 1/100 (1%)
Query: 45 FDSNVITPGTEFMAVLSIALQYYIHLRL-NNDPGWEKIKVILSDANVPGEGEHKIMSYVR 103
FDS+ I+PGT FMA ++ A+ + +L N +P W ++V+ S A+ PGEGEHKI+ ++R
Sbjct: 251 FDSSCISPGTAFMAKVTNAILTLVQDKLANGEPLWAGLRVVFSGASTPGEGEHKIIDFLR 310
Query: 104 LQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILRE 143
Q + PG++ H + GLDADL+ L+L+ H H ILR+
Sbjct: 311 TQSSYPGFNGKGAHVIVGLDADLVFLSLSLHIPHIFILRD 350
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 76/173 (43%), Gaps = 20/173 (11%)
Query: 436 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYY--EGVCSWQWFYPYHYAPF 493
W+E Y A EE + +Y EGL +V YY CSW W+YP+H+APF
Sbjct: 619 WREPYLTSTGLAGNLEEACK-------KYVEGLRFVWRYYSGNASTCSWSWYYPFHHAPF 671
Query: 494 ASDLK------DLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPIS 547
A D+ DL P F QLL + P S LP +M +P +
Sbjct: 672 ALDIADYLQRCDLTNLPPPPLETTPPDMFLQLLCILPPTSHALLPAVLGDVMLNPPEGLR 731
Query: 548 DFYPTDFEVDMN---GKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARR 597
+ +P+ + VD GK Y + + LPF + + L + V+ T++E R
Sbjct: 732 ETFPSMWRVDYTAAYGKDYLAEVL--LPFANVSELCELVESSRPYFTKDEQER 782
>gi|339906034|ref|YP_004732831.1| hypothetical protein WIV_gp048 [Wiseana iridescent virus]
gi|308051904|gb|ADO00391.1| hypothetical protein [Wiseana iridescent virus]
Length = 566
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 115/249 (46%), Gaps = 45/249 (18%)
Query: 25 LRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVI 84
+ ++ ++ R+ K + FDSN I+PGTEF+ L + L+ I +L D W + I
Sbjct: 121 ISKQIQQRQRRFLSKKTNGGFDSNCISPGTEFLYKLGLYLKSNIEKKLEKD--WLNVTTI 178
Query: 85 -LSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILRE 143
D+ VPGEGEHK+ ++R + N + G DADLIML+L + L+E
Sbjct: 179 YFMDSLVPGEGEHKLFDFLR-SNQAKIINENMGIIVVGNDADLIMLSLLISTI---FLKE 234
Query: 144 VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREY 203
+ ++D + K Y + I L++
Sbjct: 235 NLIYILRED--------------------------------LTSKKLDYLLISITQLKKN 262
Query: 204 LDYEFRIPNPPFE-IDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEF 262
+ F + P F+ D E +V DF+ +CF VGNDFLP +P I +G ++L+M K +
Sbjct: 263 I-LNFAMEKPKFKHYDFEYVVCDFVILCFMVGNDFLPPIPLFNIYDGGLDLMM----KYY 317
Query: 263 RALGGYLTD 271
GYLT+
Sbjct: 318 FTTPGYLTN 326
Score = 63.5 bits (153), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 14/155 (9%)
Query: 455 ETRKDVVLRYTEGLCWVMHYYYEG--VCSWQWFYPYHYAPFASDL-----KDLDQF---- 503
+ K +V Y + + WV +YY G W+ +YP +AP DL QF
Sbjct: 403 KINKKLVQLYVKEIEWVFNYYTYGGFTVDWKMYYPSQFAPTPVDLLHYLKTSKHQFAQSC 462
Query: 504 NISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRY 563
S H PF QLL + P SS LP+ K++ + +S F+P + ++D++GK
Sbjct: 463 GTSIPQTHQIDPFYQLLCILPPHSSDLLPKPLNKVLLEN---LSHFHPKEIDIDLSGKLN 519
Query: 564 SWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
W+GI LP ++ + + ++++ +RN
Sbjct: 520 EWEGIPILPPLNHNEIFNIYTANIKLCSKDDLKRN 554
>gi|117314|sp|P23252.1|CR2_HORVU RecName: Full=Cold-regulated protein 2
gi|167028|gb|AAC98703.1| cold-regulated [Hordeum vulgare]
Length = 202
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 54/75 (72%)
Query: 610 SHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSPVAS 669
+HP+S IY+L L K+R E+KE+L+P S GMNGYIS C GDP P VFRSPV
Sbjct: 2 AHPISPYIYSLSSKFGHLADKDRNEIKEQLDPSASGGMNGYISLCGGDPSPLVFRSPVDG 61
Query: 670 MEDIMGNQVLCAIYK 684
+EDIM NQV+C+IYK
Sbjct: 62 LEDIMDNQVICSIYK 76
>gi|194385576|dbj|BAG65165.1| unnamed protein product [Homo sapiens]
Length = 249
Score = 93.6 bits (231), Expect = 5e-16, Method: Composition-based stats.
Identities = 56/173 (32%), Positives = 82/173 (47%), Gaps = 33/173 (19%)
Query: 128 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 187
ML L +HE HFS+LRE V G+ K V
Sbjct: 1 MLGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCA 30
Query: 188 PKKP-YQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTL 244
P++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 31 PEETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHL 90
Query: 245 EIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 91 HINHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 143
>gi|167377817|ref|XP_001734556.1| 5'->3' exoribonuclease [Entamoeba dispar SAW760]
gi|165903893|gb|EDR29284.1| 5'->3' exoribonuclease, putative [Entamoeba dispar SAW760]
Length = 201
Score = 92.8 bits (229), Expect = 8e-16, Method: Composition-based stats.
Identities = 56/155 (36%), Positives = 84/155 (54%), Gaps = 5/155 (3%)
Query: 471 VMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFN--ISFELGHPFKPFNQLLGVFPSASS 528
V +YY+ + SW+W+Y +HYAPFA D N ISF P P QLL V P S
Sbjct: 1 VFNYYFNKLPSWRWYYKFHYAPFALDFALYLNENDSISFSSDTPILPLEQLLSVLPPHSF 60
Query: 529 HALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEH 588
+ +P + PNSPI ++ T F++D+NG+ ++GI LP ID L V +E
Sbjct: 61 NNIPSKLAHFVLSPNSPILHYFNTSFKIDINGENKLYKGIPLLPNIDIDLLHSFVFDLEL 120
Query: 589 TLTEEEARRNSIMA-DMLFVL--LSHPLSASIYTL 620
+L + +RN ++ ++L+V S PL + I +L
Sbjct: 121 SLPPSDFKRNILLPFNILYVTKNSSLPLFSKIQSL 155
>gi|109287937|ref|YP_654631.1| hypothetical protein MIV059L [Invertebrate iridescent virus 3]
gi|123808652|sp|Q197A1.1|EX0N_IIV3 RecName: Full=Putative exonuclease 059L
gi|106073560|gb|ABF82089.1| hypothetical protein MIV059L [Aedes taeniorhynchus iridescent
virus]
Length = 560
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 114/251 (45%), Gaps = 53/251 (21%)
Query: 26 RQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVI- 84
+Q +R+ R + K+D FDSN I+PGTEF+ L + L+ ++ +L + W + I
Sbjct: 112 KQIQQRQRRFITHKTDGG-FDSNCISPGTEFLFQLGLYLKTHLESKLEKE--WLNVSTIY 168
Query: 85 LSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVH-----FS 139
D+ VPGEGEHK+ ++R + D + G DADLIML+L + S
Sbjct: 169 FMDSLVPGEGEHKLFDFLRTHQT-RIVDTKFNIVVVGNDADLIMLSLLVSVLFIKENPLS 227
Query: 140 ILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWT 199
ILRE + T + D +L L A R F PY
Sbjct: 228 ILREDL-TSKKLD--YLLVDINLLKDTIYQNASRDKPRF-----------TPY------- 266
Query: 200 LREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYK 259
D+EF ++ DF+ MCF +GNDFLP +P I +G +++L+
Sbjct: 267 -----DFEF-------------VICDFVVMCFMIGNDFLPSVPLFNIYDGGLDMLL---- 304
Query: 260 KEFRALGGYLT 270
K + GY+T
Sbjct: 305 KYYFTTAGYIT 315
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 16/155 (10%)
Query: 455 ETRKDVVLRYTEGLCWVMHYY-YEGVC-SWQWFYPYHYAPFASDLKDLDQFNISFELGHP 512
+ K +V Y E + W+ +YY Y VC W +YP +AP A DL ++F
Sbjct: 399 KITKSLVHSYLEEIKWIFNYYAYGAVCIDWNMYYPSQFAPTALDLSFA---TLTFTSQSG 455
Query: 513 FK--------PFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYS 564
K PF QLL + P SS LP+ KL+ + D +P + ++D +GK
Sbjct: 456 LKERKKCLTDPFFQLLCILPPHSSDLLPDPLNKLLV---QKLVDGHPIEIKMDYDGKLNE 512
Query: 565 WQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 599
W+ I LP +D ++L H ++E+ +RN+
Sbjct: 513 WEAIPILPPLDYNKILKMYNDHIHQCSKEDLKRNT 547
>gi|123432925|ref|XP_001308510.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
gi|121890194|gb|EAX95580.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
Length = 966
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 118/267 (44%), Gaps = 33/267 (12%)
Query: 25 LRQEFEREGRKLPPKSDSQV---FDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKI 81
L + E+ R+ + +V F N IT GT+FM L + + Y+ R+N DP W
Sbjct: 89 LAKCIEQRSRRFSGQGKKEVAEGFTKNSITIGTKFMNDLHLKILDYLKERVNRDPIWAMP 148
Query: 82 KVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSIL 141
+I + PGEGEHK+++++R QR ++ + C+Y DAD+ +AL TH +IL
Sbjct: 149 HIIYDSYHTPGEGEHKLINFIRYQRAQGTWNEDYSCCIYSPDADIFFIALNTHMKKIAIL 208
Query: 142 REVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLR 201
++ DK + + AG+F Y +L I LR
Sbjct: 209 KDSSGDLKLADKKY-----------NSASVRFWAGDF------------IYVYLSI--LR 243
Query: 202 EYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKE 261
+ L EF N E + I DDF + +GNDF+P P I N + VY +
Sbjct: 244 QLLAAEFFNSN---EDMVNNITDDFCAISSLLGNDFIPSFPFFNIDN--FNNALEVYFTQ 298
Query: 262 FRALGGYLTDGSKPSLRRVEHFIQAVG 288
+ Y+ + + + + F++ V
Sbjct: 299 YLPKSKYIVENGEFNYSNLSDFLRDVA 325
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 96/215 (44%), Gaps = 27/215 (12%)
Query: 399 ENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKL-GEPGWKERYYEEKFNAKTPEEREETR 457
EN E + L + LRD A+N + E+ K + E+ + KF +E
Sbjct: 308 ENGEFNYSNLSDFLRDV--AYNVGDAEKSVSKQQNLLSYAEKNVQAKFALPEGPGFDEKI 365
Query: 458 KDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYA-PFASDLKDLDQFNISFELGHPFKPF 516
K++V + WV++ Y +G+ SW+W+YPY A P K L + +F G P K
Sbjct: 366 KEIVYHVMDSFVWVLNLYTKGILSWEWYYPYSSAPPLLIISKYLQGYKPNFTQGAPPKSL 425
Query: 517 NQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDE 576
L+ + P+ S++ LP + + +P SP+ D M+G S+
Sbjct: 426 EVLVSLLPANSANLLPSCLQ-FLAEPGSPVYDI--------MSGSARSFT---------- 466
Query: 577 ARLLDEVKKI----EHTLTEEEARRNSIMADMLFV 607
EVKKI E+ +T+EE RN+I L +
Sbjct: 467 REYFAEVKKIIQEKENEMTDEEKIRNTICDPFLIL 501
>gi|343424057|emb|CCD17964.1| 5'-3' exonuclease, putative [Trypanosoma vivax Y486]
Length = 996
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 85/164 (51%), Gaps = 16/164 (9%)
Query: 38 PKSDSQV-------FDSNVITPGTEFMAVLSIALQYYIHLRL-NNDPGWEKIKVILSDAN 89
P+SD+ FDSN I+PGT FM+ ++ + + + ++D W ++ VI SD+
Sbjct: 177 PRSDTSTADISAVEFDSNCISPGTAFMSKVADKVLAMLQRNMTSDDSKWSRLCVIFSDSR 236
Query: 90 VPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTP- 148
PGEGE KI+ ++R Q + PG++ H + GLDADLI LAL+ H +ILR+ P
Sbjct: 237 TPGEGEQKIIDFLRTQSSYPGFNGRGSHVIVGLDADLIFLALSLHIPGVTILRDTTRNPH 296
Query: 149 -----GQQDKCFLCGQPG--HLAANCEGKAKRKAGEFDEKGDEV 185
QQ + G+ H + A + D+ GDEV
Sbjct: 297 KRRAAAQQQRGPRSGKQKKYHFPDDARVMALNRDSSDDDTGDEV 340
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 67/171 (39%), Gaps = 19/171 (11%)
Query: 435 GWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYE--GVCSWQWFYPYHYAP 492
GW+ Y ++ E E Y GL +V YY G C W W+YP+H+ P
Sbjct: 587 GWRNAYLSTTGLSERVHEACEA-------YVNGLRFVWRYYTSSSGTC-WSWYYPFHHGP 638
Query: 493 FASDLKDLDQFN-------ISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTD--PN 543
A D+ Q +S P Q+L VFP S LP M + +
Sbjct: 639 LALDMAAYLQSCDVGRLPPVSNPATEPPNTLLQMLCVFPPTSHALLPAILGSAMLEKYKS 698
Query: 544 SPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 594
+S +P + VD + IA +PF D L V E LTEEE
Sbjct: 699 QQLSSSFPKSWSVDYHDSNEKHLAIAMIPFADVRELQPLVDAAEPHLTEEE 749
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
Query: 222 IVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVE 281
++DD I + +GNDF+PH+P+ E A++ + +Y + G D + SL ++
Sbjct: 468 VIDDIILIAMLMGNDFIPHLPSAFCGESALDNFLELYVTDVLPYGFLTIDSYEISLPQLR 527
Query: 282 HFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARRG 319
+++ E +F +R +L + ++RE+A G
Sbjct: 528 RLLESYAKIEAVLF-RRHKLLADADQNVRREEAGTGTG 564
>gi|284066759|gb|ADB77651.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 2 JKM-2010]
Length = 221
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 109/217 (50%), Gaps = 12/217 (5%)
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIRE AI+ L+ +YKK GG+LTD P L RV+ + +G ED IF+ R
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKTGGWLTDSGVPDLTRVQLIMSDLGEVEDEIFKNRQ 60
Query: 300 RLHQRHAERIKREKAQARRGDDVEPLAQPD-----SLVPVSRFHGSRLASGPSPSPYQQS 354
+ R R+K +K + + +E A + + +P ++ + S PSP P +
Sbjct: 61 QNEIRFKARMKAQKKRKK----MESEANSNCYNRPAYIPHGQYAPVAIGSTPSPVPNARQ 116
Query: 355 ECVGRLDNGKGTSGRPHKV-PRLSSGATIGAAIVEAENSF-ETDPQENKEEFKAKLKELL 412
E + G T+ V + A + + ++EA + ++D ++ E +
Sbjct: 117 ESINMRRAGMHTATDGSVVRSNHDAAAALKSMLIEAPSKLNDSDISDSSEASTPSQSPQV 176
Query: 413 RDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKT 449
+ K D+ + P D+V+L E G+K+RYYE KF+ +
Sbjct: 177 KRKHDSDEEEEP-NDEVRLWEDGFKDRYYESKFDVQA 212
>gi|157867636|ref|XP_001682372.1| putative 5'-3' exonuclease [Leishmania major strain Friedlin]
gi|68125825|emb|CAJ03874.1| putative 5'-3' exonuclease [Leishmania major strain Friedlin]
Length = 1164
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 76/154 (49%), Gaps = 33/154 (21%)
Query: 13 KDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRL 72
KDA +AA+ GR+ + FDSN I+PGT FM ++ A++ YI +L
Sbjct: 195 KDACCAAAQV----------GRQPAAAASPAKFDSNCISPGTAFMDAVATAVRDYIRRKL 244
Query: 73 ---NNDPG--------------------WEKIKVILSDANVPGEGEHKIMSYVRLQRNLP 109
ND G W + VI SD+N GEGEHKI ++R Q P
Sbjct: 245 APKENDAGGKAEAEAGASPAAITATCAHWAGLTVIFSDSNTAGEGEHKISDFLRTQSAFP 304
Query: 110 GYDPNTRHCLYGLDADLIMLALATHEVHFSILRE 143
G++ + H + GLDADLI L+L+ H ILR+
Sbjct: 305 GFNGSGCHVIAGLDADLIFLSLSLHIPRVVILRD 338
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 79/179 (44%), Gaps = 21/179 (11%)
Query: 436 WKERYYEEKFNAKTPEEREETRKDVVLR-YTEGLCWVMHYYYEGV--CSWQWFYPYHYAP 492
W++ Y +T R+E R Y EG+ +V YY SW W+YP+H+AP
Sbjct: 670 WRDVYV------RTTSLRDEAGAQAACRSYVEGMRFVWRYYSSISLQVSWAWYYPFHHAP 723
Query: 493 FASDLKDL-----DQFNISFEL----GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPN 543
A D+ D Q + P PF QLL + P S +P+ R M P
Sbjct: 724 LALDIADFLRAQGPQVQTTLAAPKLEWQPPSPFCQLLCILPPPSRQLVPDALRATMASPP 783
Query: 544 SPISDFYPTDFEVDMNGKRYSWQGIAK--LPFIDEARLLDEVKKIEHTLTEEEARRNSI 600
+ ++D +P + VD G Y + LPF D RL + V T TE E +RN++
Sbjct: 784 AELADTFPHRWVVDRTGA-YGKDHLVTVLLPFADVLRLQELVAAASGTYTEAEQQRNAL 841
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 204 LDYEFRIPNPPF----EIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYK 259
LD + P PPF I+DDFI + +GNDFLPH+P++ E A++ LM VY
Sbjct: 546 LDGRPKAPLPPFHPCTSTSNSKIIDDFIALGVLLGNDFLPHLPSVYCGESAMDTLMDVYV 605
Query: 260 KEFRALGGYLTDG 272
+ GYLT G
Sbjct: 606 RAVLPY-GYLTGG 617
>gi|398013576|ref|XP_003859980.1| 5'-3' exonuclease, putative, partial [Leishmania donovani]
gi|322498198|emb|CBZ33273.1| 5'-3' exonuclease, putative, partial [Leishmania donovani]
Length = 486
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 70/134 (52%), Gaps = 23/134 (17%)
Query: 33 GRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRL----NNDPG----------- 77
GR+ + FDSN I+PGT FM ++ A++ YI +L N+D G
Sbjct: 205 GRQPAAAASPAKFDSNCISPGTAFMDAVAAAVRDYIRHKLAPKKNDDGGKAEAEAGASPA 264
Query: 78 --------WEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 129
W + VI SD+N GEGEHKI ++R Q PG++ + H + GLDADLI L
Sbjct: 265 AINATCAHWAGLTVIFSDSNTAGEGEHKIFDFLRTQSAFPGFNGSGCHVIAGLDADLIFL 324
Query: 130 ALATHEVHFSILRE 143
+L+ H ILR+
Sbjct: 325 SLSLHIPRVVILRD 338
>gi|146083592|ref|XP_001464783.1| putative 5'-3' exonuclease [Leishmania infantum JPCM5]
gi|134068877|emb|CAM59811.1| putative 5'-3' exonuclease [Leishmania infantum JPCM5]
Length = 1158
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 70/134 (52%), Gaps = 23/134 (17%)
Query: 33 GRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRL----NNDPG----------- 77
GR+ + FDSN I+PGT FM ++ A++ YI +L N+D G
Sbjct: 205 GRQPAAAASPAKFDSNCISPGTAFMDAVAAAVRDYIRHKLAPKKNDDGGKAEAEAGASPA 264
Query: 78 --------WEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 129
W + VI SD+N GEGEHKI ++R Q PG++ + H + GLDADLI L
Sbjct: 265 AINATCAHWAGLTVIFSDSNTAGEGEHKIFDFLRTQSAFPGFNGSGCHVIAGLDADLIFL 324
Query: 130 ALATHEVHFSILRE 143
+L+ H ILR+
Sbjct: 325 SLSLHIPRVVILRD 338
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 81/179 (45%), Gaps = 21/179 (11%)
Query: 436 WKERYYEEKFNAKTPEEREETRKDVVLR-YTEGLCWVMHYYYEGV--CSWQWFYPYHYAP 492
W++ Y +T R+E R Y EG+ +V YY SW W+YP+H+AP
Sbjct: 664 WRDVYL------RTTSLRDEAGSQAACRSYVEGMRFVWRYYSSISLQVSWAWYYPFHHAP 717
Query: 493 FASDLKDL-----DQFNISFEL----GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPN 543
A D+ D Q + P PF QLL + P S +P+ R M P
Sbjct: 718 LALDIADFLRAQGPQVQTTLAAPKLEWQPPSPFCQLLCILPPPSRQLVPDALRATMASPP 777
Query: 544 SPISDFYPTDFEVDMNGKRYSWQGIAK--LPFIDEARLLDEVKKIEHTLTEEEARRNSI 600
+ ++D +P + VD G Y +A LPF + +RL + V T TE E +RN++
Sbjct: 778 AELADTFPHRWVVDRTGA-YGKDHLATVLLPFANVSRLQELVAAASGTYTEAEQQRNAL 835
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 222 IVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDG 272
I+DDFI + +GNDFLPH+P++ E A++ LM VY + GYLT G
Sbjct: 562 IIDDFIVLGVLLGNDFLPHLPSVYCGESAMDTLMDVYVRAVLPY-GYLTGG 611
>gi|284066765|gb|ADB77654.1| 5'-3' exoribonuclease II [Pogonognathellus sp. nov. B JKM-2010]
gi|284066767|gb|ADB77655.1| 5'-3' exoribonuclease II [Pogonognathellus sp. nov. B JKM-2010]
gi|284066769|gb|ADB77656.1| 5'-3' exoribonuclease II [Pogonognathellus sp. nov. B JKM-2010]
Length = 221
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 114/219 (52%), Gaps = 16/219 (7%)
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIRE AI+ L+ +YKK GG+LTD P L RV+ + +G ED IF+ R
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKTGGWLTDSGVPDLTRVQLIMSDLGEVEDEIFKNRQ 60
Query: 300 RLHQRHAERIKREKAQAR--RGDDVEPLAQPDSLVPVSRFHGSRLASGPSP--SPYQQSE 355
+ R R+K +K + + G + +P + +P ++ + S PSP + Q+S
Sbjct: 61 QNEIRFKARMKAQKKRKKLESGANSNCYNRP-AYIPHGQYAPVAIGSTPSPVLNARQESI 119
Query: 356 CVGRLDNGKGTSGRPHKVPRLS--SGATIGAAIVEAENSF-ETDPQENKEEFKAKLKELL 412
+ R+ T G V R + + A + + ++EA ++D ++ E +
Sbjct: 120 NMRRMGMHTATDG---SVVRSNHDAAAALKSMLIEAPAKLNDSDISDSSEASTPSQSPQI 176
Query: 413 RDKSDAFNSDNPEE--DKVKLGEPGWKERYYEEKFNAKT 449
+ K F+SD EE D+V+L E G+K+RYYE KF+ +
Sbjct: 177 KRK---FDSDEEEEPNDEVRLWEDGFKDRYYESKFDVQA 212
>gi|355729455|gb|AES09873.1| 5'-3' exoribonuclease 1 [Mustela putorius furo]
Length = 74
Score = 88.6 bits (218), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/70 (50%), Positives = 52/70 (74%)
Query: 64 LQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLD 123
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLD
Sbjct: 5 LKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLD 64
Query: 124 ADLIMLALAT 133
ADLIML L +
Sbjct: 65 ADLIMLGLTS 74
>gi|284066723|gb|ADB77633.1| 5'-3' exoribonuclease II [Pogonognathellus flavescens]
Length = 221
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 113/215 (52%), Gaps = 10/215 (4%)
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIRE AI+ L+ +YKK GG+LTD P L RV+ + +G ED IF+ R
Sbjct: 1 HLPSLEIRENAIDRLVTLYKKTVYKTGGWLTDSGVPDLTRVQLIMSDLGEVEDEIFKNRQ 60
Query: 300 RLHQRHAERI----KREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSE 355
+ +R R+ KR+KA+++ + +P + +P ++ + S PSP + E
Sbjct: 61 QNEERFKARMKANKKRKKAESQANSNC--YNRP-AYIPHGQYAPVAIGSTPSPVQNAREE 117
Query: 356 CVGRLDNGKGTSGRPHKV-PRLSSGATIGAAIVEAENSF-ETDPQENKEEFKAKLKELLR 413
+ +G T+ V + A + + ++EA + +++ ++ E ++
Sbjct: 118 SINMRRSGMHTATDGSLVRSNKDAAAALKSMLIEAPSKLNDSEVSDSSEASTPGQSPQVK 177
Query: 414 DKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAK 448
K D+ + + P D+V+L E G+K+RYYE KF+ +
Sbjct: 178 RKHDSDDEEEP-NDEVRLWEAGFKDRYYESKFDVQ 211
>gi|336373303|gb|EGO01641.1| hypothetical protein SERLA73DRAFT_132070 [Serpula lacrymans var.
lacrymans S7.3]
Length = 75
Score = 88.2 bits (217), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/61 (57%), Positives = 52/61 (85%)
Query: 45 FDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRL 104
+DSN ITPGT FM +L+++L+Y++ ++N DPGW+ ++VI+SDA+VPGEGEHKIM ++R
Sbjct: 15 WDSNAITPGTPFMDLLALSLRYWVVQKMNTDPGWKDLQVIISDASVPGEGEHKIMDFIRR 74
Query: 105 Q 105
Q
Sbjct: 75 Q 75
>gi|284066773|gb|ADB77658.1| 5'-3' exoribonuclease II [Pogonognathellus sp. nov. B JKM-2010]
gi|284066775|gb|ADB77659.1| 5'-3' exoribonuclease II [Pogonognathellus sp. nov. B JKM-2010]
gi|284066777|gb|ADB77660.1| 5'-3' exoribonuclease II [Pogonognathellus sp. nov. B JKM-2010]
Length = 221
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 114/222 (51%), Gaps = 22/222 (9%)
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIRE AI+ L+ +YKK GG+LTD P L RV+ + +G ED IF+ R
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKTGGWLTDSGVPDLTRVQLIMSDLGEVEDEIFKNRQ 60
Query: 300 RLHQRHAERIKREKAQARRGDDVEPLAQPD-----SLVPVSRFHGSRLASGPSP--SPYQ 352
+ R R+K +K + + +E A + + +P ++ + S PSP + Q
Sbjct: 61 QNEIRFKARMKAQKKRKK----LESEANSNCYNRPAYIPHGQYAPQAIGSTPSPVLNARQ 116
Query: 353 QSECVGRLDNGKGTSGRPHKVPRLS--SGATIGAAIVEAENSF-ETDPQENKEEFKAKLK 409
+S + R+ T G V R + + A + + ++EA ++D ++ E
Sbjct: 117 ESINMRRMGMHTATDG---SVVRSNHDAAAALKSMLIEAPAKLNDSDISDSSEASTPSQS 173
Query: 410 ELLRDKSDAFNSDNPEE--DKVKLGEPGWKERYYEEKFNAKT 449
++ K F+SD EE D+V+L E G+K+RYYE KF+ +
Sbjct: 174 PQIKRK---FDSDEEEEPNDEVRLWEDGFKDRYYESKFDVQA 212
>gi|401418979|ref|XP_003873980.1| putative 5'-3' exonuclease [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322490213|emb|CBZ25474.1| putative 5'-3' exonuclease [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 1161
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 69/131 (52%), Gaps = 20/131 (15%)
Query: 33 GRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRL---NNDPG------------ 77
GR+ + FDSN I+PGT FM ++ A++ YI +L +D G
Sbjct: 206 GRQPAAAASPAKFDSNCISPGTAFMDAVATAVRDYIRRKLAPKESDGGGEAVAEAGASPA 265
Query: 78 -----WEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALA 132
W + V+ SD+N GEGEHKI ++R Q PG++ + H + GLDADLI L+L+
Sbjct: 266 ATCAHWAGLTVVFSDSNTAGEGEHKIFDFLRTQSAFPGFNGSGCHVIAGLDADLIFLSLS 325
Query: 133 THEVHFSILRE 143
H ILR+
Sbjct: 326 LHIPRVVILRD 336
Score = 82.8 bits (203), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 79/178 (44%), Gaps = 19/178 (10%)
Query: 436 WKERYYEEKFNAKTPEEREETRKDVVLR-YTEGLCWVMHYYYEGV--CSWQWFYPYHYAP 492
W++ Y +T R+E R Y EG+ +V YY SW W+YP+H+AP
Sbjct: 667 WRDVY------VRTTSLRDEAGAQAACRSYVEGMRFVWRYYSSISLQVSWAWYYPFHHAP 720
Query: 493 FASDLKDL-----DQFNISFEL----GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPN 543
A D+ D Q + P PF QLL + PS S +P+ R M P
Sbjct: 721 LALDIADFLRAQGPQVQTTLAAPKLEWQPPSPFCQLLCILPSPSCQLVPDALRATMASPP 780
Query: 544 SPISDFYPTDFEVDMNGKR-YSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSI 600
+ ++D +P + VD G A LPF + RL + V T TE E +RN++
Sbjct: 781 AELADTFPRRWVVDRTGAYGKDHLATALLPFANVPRLQELVAAASGTYTEAEQQRNAL 838
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 222 IVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGS-KPSLRRV 280
I+DDFI + +GNDFLPH+P++ E A++ LM VY + GYLT G + L ++
Sbjct: 565 IIDDFIVLGVLLGNDFLPHLPSVYCGESAMDTLMDVYVRAVLPY-GYLTGGEYEIQLLQL 623
Query: 281 EHFIQAVGSYEDRIFQK 297
E +A + E F++
Sbjct: 624 ERLFRAYAAVEAARFRQ 640
>gi|389600932|ref|XP_001563893.2| putative 5'-3' exonuclease [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322504577|emb|CAM37939.2| putative 5'-3' exonuclease [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 1108
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 67/125 (53%), Gaps = 26/125 (20%)
Query: 45 FDSNVITPGTEFMAVLSIALQYYIHLRLN---NDPG-----------------------W 78
FDSN I+PGT FM ++ A++ YIH +L ND G W
Sbjct: 217 FDSNCISPGTVFMDAVAAAVRDYIHRKLAPKANDGGDSAEVEAGSSPSSSTTINAPCAHW 276
Query: 79 EKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHF 138
+ V+ SD+N GEGEHK++ ++R Q PG++ + H + GLDADLI L+L+ H
Sbjct: 277 AGLTVVFSDSNTAGEGEHKLVDFLRTQSAFPGFNGSGCHVIAGLDADLIFLSLSLHIPRV 336
Query: 139 SILRE 143
ILR+
Sbjct: 337 VILRD 341
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 80/179 (44%), Gaps = 21/179 (11%)
Query: 436 WKERYYEEKFNAKTPEEREETRKDVVLR-YTEGLCWVMHYYYEGV--CSWQWFYPYHYAP 492
W++ Y +T R+E R Y EGL +V YY +W W+YP+++AP
Sbjct: 623 WRDVY------VRTTSLRDEAGTQAACRSYVEGLQFVWRYYSSVSLQVNWAWYYPFYHAP 676
Query: 493 FASDLKD--------LDQFNISFEL-GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPN 543
A D+ D + + EL G P PF QLL + P S +PE R MT P
Sbjct: 677 LALDIADFLRAQGPQVQTTLAALELEGQPPSPFCQLLCILPPPSRQLVPEALRAAMTSPP 736
Query: 544 SPISDFYPTDFEVDMNGKRYSWQGIAK--LPFIDEARLLDEVKKIEHTLTEEEARRNSI 600
+ + D +P + VD G Y +A LPF + L V T EE +RN++
Sbjct: 737 AELVDTFPHRWVVDRTGA-YGKDHLAAVLLPFANLPPLQGLVAAASGIYTAEEKQRNTL 794
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 222 IVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTD-GSKPSLRRV 280
IVDDFI + +GNDFLPH+P++ E A++ LM VY + GYLT + L ++
Sbjct: 521 IVDDFIVLGMLLGNDFLPHLPSVYCGESAMDTLMDVYTRAVLPY-GYLTGVKCEIQLAQL 579
Query: 281 EHFIQAVGSYEDRIFQKRA 299
E ++A + E F++ A
Sbjct: 580 ERLLRAYAAVEAVRFRQFA 598
>gi|284066761|gb|ADB77652.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 3 JKM-2010]
Length = 221
Score = 86.3 bits (212), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 114/222 (51%), Gaps = 22/222 (9%)
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIRE AI+ L+ +YKK GG+LTD P L RV+ + +G ED IF+ R
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKTGGWLTDSGVPDLTRVQLIMSDLGEVEDEIFKNRQ 60
Query: 300 RLHQRHAERIKREKAQARRGDDVEPLAQPD-----SLVPVSRFHGSRLASGPSP--SPYQ 352
+ R R+K +K + + +E A + + +P + + S PSP + Q
Sbjct: 61 QNEIRFKARMKAQKKRKK----LESEANSNCYNRPAYIPHGQLAPVAIGSTPSPVQNARQ 116
Query: 353 QSECVGRLDNGKGTSGRPHKVPRLS--SGATIGAAIVEAENSF-ETDPQENKEEFKAKLK 409
+S + R+ T G V R + + A + + ++EA + ++D ++ E
Sbjct: 117 ESINMRRMGMHTATDG---SVIRSNHDAAAALKSMLIEAPSKLNDSDKSDSSEASTPSQS 173
Query: 410 ELLRDKSDAFNSDNPEE--DKVKLGEPGWKERYYEEKFNAKT 449
++ K ++SD EE D+V+L E G+K+RYYE KF+ +
Sbjct: 174 PQVKRK---YDSDEEEEPNDEVRLWEDGFKDRYYESKFDVQA 212
>gi|170105585|ref|XP_001884005.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164641185|gb|EDR05447.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 350
Score = 86.3 bits (212), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 68/143 (47%), Gaps = 38/143 (26%)
Query: 478 GVCSWQWFYPYHYAPFAS-----------------DLKDLDQFNISFELGHPFKPFNQLL 520
GV SW WFY YHYAP S DL+ D+ + F+
Sbjct: 144 GVASWGWFYDYHYAPRISGVHRRLGCWTLLVLPIADLRGADEMSFDFQ------------ 191
Query: 521 GVFPSASSHALPEHY----RKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDE 576
P + A+P Y R LM DPNSPI DFYP +F D+NGK+ W+ I FIDE
Sbjct: 192 ---PGNAVEAVPAAYGRVARYLMYDPNSPILDFYPLEFAQDLNGKKQDWEAIVT--FIDE 246
Query: 577 ARLLDEVKKIEHTLTEEEARRNS 599
R L + +H LT EE +RN+
Sbjct: 247 ERPLKAMTARDHCLTPEERKRNA 269
>gi|284066747|gb|ADB77645.1| 5'-3' exoribonuclease II [Pogonognathellus nigritus]
gi|284066749|gb|ADB77646.1| 5'-3' exoribonuclease II [Pogonognathellus nigritus]
gi|284066751|gb|ADB77647.1| 5'-3' exoribonuclease II [Pogonognathellus nigritus]
gi|284066757|gb|ADB77650.1| 5'-3' exoribonuclease II [Pogonognathellus nigritus]
Length = 221
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 109/216 (50%), Gaps = 10/216 (4%)
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIRE AI+ L+ +YKK GG+LTD P L RV+ + +G ED IF+ R
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKTGGWLTDSGVPDLTRVQLIMSDLGEVEDEIFRNRQ 60
Query: 300 RLHQRHAERIKREKAQARRGDDVEP--LAQPDSLVPVSRFHGSRLASGPSPSPYQQSECV 357
+ R R+K +K + + + ++P + +P + + S PSP + E +
Sbjct: 61 QNEVRFKARMKAQKKRKKLESEANSNCYSRP-AYIPHGQLAPVAIGSNPSPVRNAREENI 119
Query: 358 GRLDNGKGTSGRPHKV-PRLSSGATIGAAIVEAENSF-ETDPQENKEEFKAKLKELLRDK 415
G T+ V + A + + ++EA + ++D + + ++ K
Sbjct: 120 NMRRAGMHTATDGSLVRSNKDAAAALKSMLIEAPSKLNDSDTSDASDVSTPGQSPQVKRK 179
Query: 416 SDAFNSDNPEE--DKVKLGEPGWKERYYEEKFNAKT 449
F+SD+ EE D+V+L E G+K+RYYE KF+ +
Sbjct: 180 ---FDSDDEEEPNDEVRLWEAGFKDRYYESKFDVQA 212
>gi|284066745|gb|ADB77644.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 1 JKM-2010]
Length = 221
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 113/219 (51%), Gaps = 16/219 (7%)
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIRE AI+ L+ +YKK GG+LTD P L RV+ + +G ED IF+ R
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKTGGWLTDSGVPDLTRVQLIMSDLGEVEDEIFRNRQ 60
Query: 300 RLHQRHAERIKREKAQARRGDDVEPLAQPDSLV-PVSRFHG--SRLASGPSPSPYQQS-- 354
+ R R+K +K + + +E A + P HG + +ASG +PSP + +
Sbjct: 61 QNEVRFKARMKAQKKRKK----LESEANSNCYSRPAYIPHGQLAPVASGSTPSPVRNARE 116
Query: 355 ECVGRLDNGKGTSGRPHKV-PRLSSGATIGAAIVEAENSF-ETDPQENKEEFKAKLKELL 412
E + G T+ V + A + + ++EA + ++D + + +
Sbjct: 117 ENINMRRAGMHTATDGSLVRSNKDAAAALKSMLIEAPSKLNDSDISDASDVSTPSQSPQV 176
Query: 413 RDKSDAFNSDNPEE--DKVKLGEPGWKERYYEEKFNAKT 449
+ K F+SD+ EE D+V+L E G+K+RYYE KF+ +
Sbjct: 177 KRK---FDSDDEEEPNDEVRLWEAGFKDRYYESKFDVQA 212
>gi|284066797|gb|ADB77670.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 9 JKM-2010]
Length = 221
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 108/214 (50%), Gaps = 6/214 (2%)
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIRE AI+ L+ +YKK GG+LTD P L RV+ + +G ED IF+ R
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKTGGWLTDSGVPDLTRVQLIMSDLGEVEDEIFKNRQ 60
Query: 300 RLHQRHAERIKREKAQAR--RGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECV 357
+ R R+K +K + + G + +P + +P ++ + S PSP + E +
Sbjct: 61 QNEIRFKARMKAQKKRKKLESGANSNCYNRP-AYIPHGQYAPVAIGSTPSPVQNARQESI 119
Query: 358 GRLDNGKGTSGRPHKV-PRLSSGATIGAAIVEAENSF-ETDPQENKEEFKAKLKELLRDK 415
G T+ V + A + + ++EA + +++ ++ E ++ K
Sbjct: 120 NMRRMGMHTATDGSVVRSNHDAAAALRSMLIEAPSKLNDSEISDSSEASTPSQXPQVKRK 179
Query: 416 SDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKT 449
D+ + P D+V+L E G+K+RYYE KF+ +
Sbjct: 180 HDSDEEEEP-NDEVRLWEDGFKDRYYESKFDVQA 212
>gi|284066801|gb|ADB77672.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 9 JKM-2010]
Length = 221
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 108/214 (50%), Gaps = 6/214 (2%)
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIRE AI+ L+ +YKK GG+LTD P L RV+ + +G ED IF+ R
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKTGGWLTDSGVPDLTRVQLIMSDLGEVEDEIFKNRQ 60
Query: 300 RLHQRHAERIKREKAQAR--RGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECV 357
+ R R+K +K + + G + +P + +P ++ + S PSP + E +
Sbjct: 61 QNEIRFKARMKAQKKRKKLESGANSNCYNRP-AYIPHGQYAPVAIGSTPSPVQNARQESI 119
Query: 358 GRLDNGKGTSGRPHKV-PRLSSGATIGAAIVEAENSF-ETDPQENKEEFKAKLKELLRDK 415
G T+ V + A + + ++EA + +++ ++ E ++ K
Sbjct: 120 NMRRMGMHTATDGSVVRSNHDAAAALRSMLIEAPSKLNDSEISDSSEASTPSQSPQVKRK 179
Query: 416 SDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKT 449
D+ + P D+V+L E G+K+RYYE KF+ +
Sbjct: 180 HDSDEEEEP-NDEVRLWEDGFKDRYYESKFDVQA 212
>gi|284066737|gb|ADB77640.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 1 JKM-2010]
gi|284066739|gb|ADB77641.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 1 JKM-2010]
gi|284066741|gb|ADB77642.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 1 JKM-2010]
gi|284066743|gb|ADB77643.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 1 JKM-2010]
Length = 221
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 109/216 (50%), Gaps = 10/216 (4%)
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIRE AI+ L+ +YKK GG+LTD P L RV+ + +G ED IF+ R
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKTGGWLTDSGVPDLTRVQLIMSDLGEVEDEIFRNRQ 60
Query: 300 RLHQRHAERIKREKAQARRGDDVEP--LAQPDSLVPVSRFHGSRLASGPSPSPYQQSECV 357
+ R R+K +K + + + ++P + +P + + S PSP + E +
Sbjct: 61 QNEVRFKARMKAQKKRKKLESEANSNCYSRP-AYIPHGQLAPVAIGSTPSPVRNAREENI 119
Query: 358 GRLDNGKGTSGRPHKV-PRLSSGATIGAAIVEAENSF-ETDPQENKEEFKAKLKELLRDK 415
G T+ V + A + + ++EA + ++D + + ++ K
Sbjct: 120 NMRRAGMHTATDGSLVRSNKDAAAALKSMLIEAPSKLNDSDISDASDVSTPSQSPQVKRK 179
Query: 416 SDAFNSDNPEE--DKVKLGEPGWKERYYEEKFNAKT 449
F+SD+ EE D+V+L E G+K+RYYE KF+ +
Sbjct: 180 ---FDSDDEEEPNDEVRLWEAGFKDRYYESKFDVQA 212
>gi|284066793|gb|ADB77668.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 7 JKM-2010]
Length = 221
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 108/214 (50%), Gaps = 6/214 (2%)
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIRE AI+ L+ +YKK GG+LTD P L RV+ + +G ED IF+ R
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKTGGWLTDSGVPDLTRVQLIMSDLGEVEDEIFKNRQ 60
Query: 300 RLHQRHAERIKREKAQAR--RGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECV 357
+ R R+K +K + + G + +P + +P ++ + S PSP + E +
Sbjct: 61 QNEIRFKARMKAQKKRKKLESGANSNCYNRP-AYIPHGQYAPVAIGSTPSPVHNARQESI 119
Query: 358 GRLDNGKGTSGRPHKV-PRLSSGATIGAAIVEAENSF-ETDPQENKEEFKAKLKELLRDK 415
G T+ V + A + + ++EA + +++ ++ E ++ K
Sbjct: 120 NMRRAGMHTATDGSVVRSNHDAAAALKSMLIEAPSKLNDSEISDSSEGSTPTQSPQVKRK 179
Query: 416 SDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKT 449
D+ + P D+V+L E G+K+RYYE KF+ +
Sbjct: 180 HDSDEEEEP-NDEVRLWEDGFKDRYYESKFDVQA 212
>gi|284066779|gb|ADB77661.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 4 JKM-2010]
gi|284066781|gb|ADB77662.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 4 JKM-2010]
Length = 220
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 110/215 (51%), Gaps = 11/215 (5%)
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIRE AI+ L+ +YKK GG+LTD P L RV+ + +G ED IF+ R
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKTGGWLTDSGVPDLTRVQLIMSDLGEVEDEIFKNRQ 60
Query: 300 RLHQRHAERIKREKAQARRGDDVEP--LAQPDSLVPVSRFHGSRLASGPSPSPYQQSECV 357
+ R R+K +K + + + ++P + +P ++ + S PSP + E +
Sbjct: 61 QNEIRFKARMKAQKKRKKLESEANSNCYSRP-AYIPHGQYAPVAIGSTPSPVQNARQESI 119
Query: 358 GRLDNGKGTSGRPHKV-PRLSSGATIGAAIVEAENSF-ETDPQENKEEFKAKLKELLRDK 415
G T+ V + A + + ++E + ++D ++ ++ ++ R
Sbjct: 120 NMRRAGMHTATDGSVVRSNHDAAAALKSMLIETPSKLNDSDGNSSEASTPSQSPQVKR-- 177
Query: 416 SDAFNSDNPEE--DKVKLGEPGWKERYYEEKFNAK 448
++SD EE D+V+L E G+K+RYYE KF+ +
Sbjct: 178 --KYDSDEEEEPNDEVRLWEDGFKDRYYESKFDVQ 210
>gi|284066795|gb|ADB77669.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 8 JKM-2010]
Length = 221
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 108/217 (49%), Gaps = 12/217 (5%)
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIRE AI+ L+ +YKK GG+LTD P L RV+ + +G ED IF+ R
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKTGGWLTDSGVPDLTRVQLIMSDLGEVEDEIFKNRQ 60
Query: 300 RLHQRHAERIKREKAQARRGDDVEPLAQPD-----SLVPVSRFHGSRLASGPSPSPYQQS 354
+ R R+K +K + + +E A + + +P ++ + S PSP +
Sbjct: 61 QNEIRFKARMKAQKKRKK----LESEANSNCYNRPAYIPHGQYAPVAIGSTPSPVQNARQ 116
Query: 355 ECVGRLDNGKGTSGRPHKV-PRLSSGATIGAAIVEAENSF-ETDPQENKEEFKAKLKELL 412
E + G T+ V + A + + ++EA + +++ ++ E +
Sbjct: 117 ESINMRRMGMHTATDGSVVRSNHDAAAALRSMLIEAPSKLNDSEISDSSEASTPSQSPQV 176
Query: 413 RDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKT 449
+ K D+ + P D+V+L E G+K+RYYE KF+ +
Sbjct: 177 KRKHDSDEEEEP-NDEVRLWEDGFKDRYYESKFDVQA 212
>gi|284066807|gb|ADB77675.1| 5'-3' exoribonuclease II [Pogonognathellus sp. nov. A JKM-2010]
gi|284066809|gb|ADB77676.1| 5'-3' exoribonuclease II [Pogonognathellus sp. nov. A JKM-2010]
gi|284066811|gb|ADB77677.1| 5'-3' exoribonuclease II [Pogonognathellus sp. nov. A JKM-2010]
Length = 221
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 108/216 (50%), Gaps = 12/216 (5%)
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIRE AI+ L+ +YKK GG+LTD P L RV+ + +G ED IF+ R
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKTGGWLTDSGVPDLTRVQLIMSDLGEVEDEIFKNRQ 60
Query: 300 RLHQRHAERIKREKAQARRGDDVEPLAQPD-----SLVPVSRFHGSRLASGPSPSPYQQS 354
+ R R+K +K + + +E A + + +P ++ + S PSP +
Sbjct: 61 QNEIRFKARMKAQKKRKK----LESEANSNCYNRPAYIPHGQYAPVAIGSTPSPVQNARQ 116
Query: 355 ECVGRLDNGKGTSGRPHKV-PRLSSGATIGAAIVEAENSF-ETDPQENKEEFKAKLKELL 412
E + G T+ V + A + + ++E + +++ ++ E +
Sbjct: 117 ESINMRRMGMHTATDGSVVRSNHDAAAALKSMLIETPSKLNDSEISDSSEASTPSQSPQV 176
Query: 413 RDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAK 448
+ K D+ + + P D+V+L E G+K+RYYE KF+ +
Sbjct: 177 KRKHDSDDEEEP-NDEVRLWEDGFKDRYYESKFDVQ 211
>gi|284066789|gb|ADB77666.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 7 JKM-2010]
Length = 224
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 108/220 (49%), Gaps = 15/220 (6%)
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIRE AI+ L+ +YKK GG+LTD P L RV+ + +G ED IF+ R
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKTGGWLTDSGVPDLTRVQLIMSDLGEVEDEIFKNRQ 60
Query: 300 RLHQRHAERIKREKAQARRGDDVEPLAQPD-----SLVPVSRFHGSRLASGPSPSPYQQS 354
+ R R+K +K + + +E A + + +P ++ + S PSP +
Sbjct: 61 QNEIRFKARMKAQKKRKK----LESEANSNCYNRPAYIPHGQYAPVAIGSTPSPVHNARQ 116
Query: 355 ECVGRLDNGKGTSGRPHKV-PRLSSGATIGAAIVEA----ENSFETDPQENKEEFKAKLK 409
E + G T+ V + A + + ++EA +S +D E ++
Sbjct: 117 ESINMRRAGMHTATDGSVVRSNHDAAAALKSMLIEAPSKLNDSEVSDSSEGTTPSQSPQA 176
Query: 410 ELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKT 449
++ K D+ + P D+V+L E G+K+RYYE KF+ +
Sbjct: 177 PQVKRKHDSDEEEEP-NDEVRLWEDGFKDRYYESKFDVQA 215
>gi|284066731|gb|ADB77637.1| 5'-3' exoribonuclease II [Pogonognathellus elongatus]
Length = 221
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 107/217 (49%), Gaps = 12/217 (5%)
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIRE AI+ L+ +YKK GG+LTD P L RV+ + +G ED IF+ R
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKTGGWLTDSGVPDLTRVQLIMSDLGEVEDEIFRNRQ 60
Query: 300 RLHQRHAERIKREKAQARRGDDVEPLAQPD-----SLVPVSRFHGSRLASGPSPSPYQQS 354
+ R R+K +K + + +E A + + +P + + S PSP +
Sbjct: 61 QNEVRFKARMKAQKKRKK----LESQANSNCYSRPAYIPHGQLAPVAIGSTPSPVQNARE 116
Query: 355 ECVGRLDNGKGTSGRPHKV-PRLSSGATIGAAIVEAENSF-ETDPQENKEEFKAKLKELL 412
E + G T+ V + A + + ++EA + ++D + + +
Sbjct: 117 ENINMRRAGMHTATDGSLVRSNKDAAAALKSMLIEAPSKLNDSDISDASDVSTPSQSPQV 176
Query: 413 RDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKT 449
+ K D+ + + P D+V+L E G+K+RYYE KF+ +
Sbjct: 177 KRKLDSDDEEEP-NDEVRLWEAGFKDRYYESKFDVQA 212
>gi|284066719|gb|ADB77631.1| 5'-3' exoribonuclease II [Tomocerus minor]
Length = 223
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 106/222 (47%), Gaps = 22/222 (9%)
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIRE AI+ L+ +YKK GG+LTD P L RV+ + +G ED IF+ R
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKTGGWLTDSGVPDLTRVQLIMSDLGEVEDEIFKNRQ 60
Query: 300 RLHQRHAERIKREKAQARRGDDVEPLAQPDSLV---PVSRFHGSRL--ASGPSPS----P 350
+ R R+K +K + + Q DS P HG A G SPS P
Sbjct: 61 QNEIRFKARMKAQKKRKK------SEMQADSNCYNRPAYLTHGQFAPNAIGSSPSAIQNP 114
Query: 351 YQQSECVGRLDNGKGTSGRPHKVPRLS--SGATIGAAIVEAENSFETDPQENKEEFKAKL 408
Q+ + R+ T G V R + + A + + + EA + + +
Sbjct: 115 RQEGINMRRMGMHTATDG---SVVRSNHDAAAALKSMLYEAPSKLNDSGLSDSSQGSTPG 171
Query: 409 KELLRDKSDAFNSDNPEE--DKVKLGEPGWKERYYEEKFNAK 448
+ + F+SD+ EE D+V+L E G+K+RYYE KF+ +
Sbjct: 172 QSPMGSDKRKFDSDDEEEPNDEVRLWEDGFKDRYYESKFDVQ 213
>gi|322511261|gb|ADX06572.1| putative XRN family 5'-3' exonuclease [Organic Lake phycodnavirus]
Length = 467
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 111/249 (44%), Gaps = 64/249 (25%)
Query: 10 RASKDAADSAAEEERLRQEFEREGRKLPPK---SDSQVFDSNVITPGTEFMAVLSIALQY 66
+ ++ D A ++ Q+ +R + K + S F++N ITPGT FM L++
Sbjct: 64 KQTRICFDGVAPLAKMVQQKQRRYKSHLTKKILNQSSSFNTNCITPGTLFMNGLNV---- 119
Query: 67 YIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADL 126
Y+ +L+ND ++LS ++ PGEGE+KI ++R +N H +YGLDADL
Sbjct: 120 YLKEKLDNDTT-----IVLSGSDEPGEGEYKIFQHIRTCKN-----NQENHIIYGLDADL 169
Query: 127 IMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVV 186
IML+L + RE
Sbjct: 170 IMLSLLQLPKQIYLYRET------------------------------------------ 187
Query: 187 VPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI 246
K +++L+ ++E DY + +I ++++ F+CFF GNDFLPH P++ I
Sbjct: 188 ---KYFKYLN--YIQENQDYLLDVSLLGEQICQSMSIENYCFLCFFCGNDFLPHFPSINI 242
Query: 247 REGAINLLM 255
R I+ L+
Sbjct: 243 RNHGIDHLL 251
>gi|284066783|gb|ADB77663.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 5 JKM-2010]
gi|284066785|gb|ADB77664.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 5 JKM-2010]
gi|284066787|gb|ADB77665.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 6 JKM-2010]
Length = 224
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 108/220 (49%), Gaps = 15/220 (6%)
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIRE AI+ L+ +YKK GG+LTD P L RV+ + +G ED IF+ R
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKTGGWLTDSGVPDLTRVQLIMSDLGEVEDEIFKNRQ 60
Query: 300 RLHQRHAERIKREKAQARRGDDVEPLAQPD-----SLVPVSRFHGSRLASGPSPSPYQQS 354
+ R R+K K + + +E A + + +P ++ + S PSP +
Sbjct: 61 QNEIRFKARMKANKKRKK----LESEANSNCYNRPAYIPHGQYAPVAIGSTPSPVQNARQ 116
Query: 355 ECVGRLDNGKGTSGRPHKV-PRLSSGATIGAAIVEA----ENSFETDPQENKEEFKAKLK 409
E + G T+ V + A + + ++EA +S +D E ++
Sbjct: 117 ESINMRRMGMHTATDGSVVRSNHDAAAALRSMLIEAPSKLNDSEISDSSEASTPSQSPQA 176
Query: 410 ELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKT 449
++ K D+ + + P D+V+L E G+K+RYYE KF+ +
Sbjct: 177 PQVKRKHDSDDEEEP-NDEVRLWEDGFKDRYYESKFDVQA 215
>gi|440298458|gb|ELP91094.1| 5'->3' exoribonuclease, putative [Entamoeba invadens IP1]
Length = 608
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 127/257 (49%), Gaps = 19/257 (7%)
Query: 46 DSNVITPGTEFMAVLSIALQYYIHLRLNND--PGWEKIKVILSDANVPGEGEHKIMSYVR 103
D N ITPGT+FM +S ++ +I ++NN + +IK I+S + PGEGEHKI+ ++R
Sbjct: 110 DGNKITPGTDFMEKISTGVESFILSQMNNVGLDYFRRIKTIVSGVHSPGEGEHKIIEFIR 169
Query: 104 LQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHL 163
Q+ + H + G DADL++L+L H + ILR+ FTP + + GH
Sbjct: 170 SQKRV-----TESHVICGEDADLLLLSLTLHTDNIFILRK--FTPPTKQYS-RPKKNGHG 221
Query: 164 AANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIV 223
A K K E +K D + + F++I L L EI+ +
Sbjct: 222 HAKV-AKDKSAKSEKPQKSD-----VQLFDFVNITLLSNKLVS--MSAEMGKEINRTQLE 273
Query: 224 DDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHF 283
+DF+F+ GNDF+P++P +++ G+ + + Y K + G +LT + + F
Sbjct: 274 NDFVFLMSLAGNDFVPNVPGVDVYSGSFKMALTCYFK-LSSGGVFLTKNDDINFPAFKEF 332
Query: 284 IQAVGSYEDRIFQKRAR 300
++ + E+ + + R
Sbjct: 333 LEKLRENEEMMVKTMVR 349
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 85/183 (46%), Gaps = 11/183 (6%)
Query: 429 VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPY 488
V++GE W+ RY + F + EE K V Y +G+ WV YY SW++ Y
Sbjct: 370 VRIGEANWRSRYEKVLF-----QSNEEYMKRGVKEYIKGIVWVYLYYTGHPISWEFGYRP 424
Query: 489 HYAPFASDLKDLDQFNISFEL--GHPFKPFNQLLGVFPSASSHALPEHYRKLM-TDPNSP 545
YAP + L + +I + P P QL+ V P SS LP + + D S
Sbjct: 425 FYAPTLTMLNTYFEVDIKEVITPTPPLSPLVQLVLVLPPKSSRFLPLPLQTIFEEDWFSE 484
Query: 546 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 605
IS PT +D+NG+ ++GI + F R + V +LT E R+ ++ D+L
Sbjct: 485 ISPKKPT---IDLNGECVGYKGIPLVNFPSIERAKEYVNARISSLTPLEKARDRVLDDIL 541
Query: 606 FVL 608
FV
Sbjct: 542 FVF 544
>gi|284066721|gb|ADB77632.1| 5'-3' exoribonuclease II [Pogonognathellus bidentatus]
Length = 222
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 105/219 (47%), Gaps = 15/219 (6%)
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIRE AI+ L+ +YKK GG+LTD P L RV+ + +G ED IF+ R
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKTGGWLTDSGVPDLTRVQLIMSDLGEVEDEIFRNR- 59
Query: 300 RLHQRHAERIK-REKAQARRGDDVEPLAQPD-----SLVPVSRFHGSRLASGPSPSPYQQ 353
Q++ ER K R KAQ +R +E A + + +P ++ + S PSP +
Sbjct: 60 ---QQNEERFKARMKAQKKRK-KLESEANSNCYNRPAYIPHGQYAPVAIGSTPSPVQNAR 115
Query: 354 SECVGRLDNGKGTSGRPHKV-PRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELL 412
E + G T+ V + A + + ++E + D A
Sbjct: 116 QESINMRRQGMHTAVDGSVVRSNHDAAAALKSMLIETPSKL-NDADVGNSSSDASTPGQS 174
Query: 413 RDKSDAFNSDNPEE--DKVKLGEPGWKERYYEEKFNAKT 449
+SD+ EE D+V+L E G+K+RYYE KF+ +
Sbjct: 175 SQVKRKHDSDDEEEPNDEVRLWEAGFKDRYYESKFDVQA 213
>gi|284066733|gb|ADB77638.1| 5'-3' exoribonuclease II [Pogonognathellus elongatus]
Length = 221
Score = 83.2 bits (204), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 107/214 (50%), Gaps = 6/214 (2%)
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIRE AI+ L+ +YKK GG+LTD P L RV+ + +G ED IF+ R
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKTGGWLTDSGVPDLTRVQLIMSDLGEVEDEIFRNRQ 60
Query: 300 RLHQRHAERIKREKAQARRGDDVEP--LAQPDSLVPVSRFHGSRLASGPSPSPYQQSECV 357
+ R R+K +K + + + ++P + +P + + S PSP + E +
Sbjct: 61 QNEVRFKARMKAQKKRKKLESEANSNCYSRP-AYIPHGQLAPVAIGSTPSPVRNAREENI 119
Query: 358 GRLDNGKGTSGRPHKV-PRLSSGATIGAAIVEAENSF-ETDPQENKEEFKAKLKELLRDK 415
G T+ V + A + + ++EA + ++D + + ++ K
Sbjct: 120 NMRRAGMHTATDGSLVRSNKDAAAALKSMLIEAPSKLNDSDISDASDVSTPGQSPQVKRK 179
Query: 416 SDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKT 449
D+ + + P D+V+L E G+K+RYYE KF+ +
Sbjct: 180 LDSDDEEEP-NDEVRLWEAGFKDRYYESKFDVQA 212
>gi|154422101|ref|XP_001584063.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121918308|gb|EAY23077.1| hypothetical protein TVAG_183130 [Trichomonas vaginalis G3]
Length = 859
Score = 82.8 bits (203), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 117/262 (44%), Gaps = 55/262 (20%)
Query: 64 LQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLD 123
L+ +I ++ ND W++ KVI + + VPGE E KI Y+R + N P +D N RHC++ D
Sbjct: 119 LKSWIQEKIKNDDIWKRPKVIFAGSAVPGEAETKIFDYIRQEMNKPDWDLNKRHCIFTPD 178
Query: 124 ADLIMLALATHEVHFSILRE---VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 180
+DLI++ L +H +F ++ + G + F P L
Sbjct: 179 SDLILMTLRSHIQNFDLIYQNYRFNLVRGTRTPNFPIT-PSSLTV--------------- 222
Query: 181 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 240
+ I LREYL +F I + E I DDF+ +C +G+D+
Sbjct: 223 --------------ISINILREYLKLDFEIAD-------EQIFDDFVTICDILGSDYCAP 261
Query: 241 MPTLEIREGAINL----LMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 296
+ E +NL L+ YK E ++TD + ++ F+ + + I +
Sbjct: 262 L------EDVVNLDLESLIQSYKSEPHC--NFITDCDNFNFDNLKIFLNKILKH---IAE 310
Query: 297 KRARLHQRHAERIKREKAQARR 318
+++ + ++ E+ ++ + R+
Sbjct: 311 RKSTTYTKYVEKQRKNYFETRK 332
Score = 40.0 bits (92), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 7/107 (6%)
Query: 437 KERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYA-PFAS 495
++ Y+E + TPEE E+ V+ + L +++ Y G+ SW W Y YH+A P
Sbjct: 324 RKNYFETR--KVTPEETEKISHCVL----DSLLYIVKSYAIGIPSWSWVYQYHFAPPLCV 377
Query: 496 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDP 542
L ++ F P L+ SS + P + TDP
Sbjct: 378 VLDYIETFKSQLVQDEPTNLLQSLMVSLKGISSLSPPYFVQLRETDP 424
>gi|357289551|gb|AET72864.1| 5'-3' exoribonuclease [Phaeocystis globosa virus 12T]
gi|357292303|gb|AET73639.1| 5'-3' exoribonuclease [Phaeocystis globosa virus 14T]
Length = 526
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 142/329 (43%), Gaps = 81/329 (24%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
+NQQ++RR++ S + + +P +D+ ITPGTEFM L
Sbjct: 91 LNQQKNRRYKTSYQST--------------LFSKNVP-------WDTTAITPGTEFMDKL 129
Query: 61 SIALQYYIHLRLNNDPG--WEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRH- 117
+ L+ N G ++ +ILS ++PGEGEHK+ +VR + N +H
Sbjct: 130 NDTLK--------NHFGDKYKSNNLILSLTDIPGEGEHKLFEFVR--------NNNHKHD 173
Query: 118 --CLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGK---AK 172
+YG+D+DLIML+L + SI +L + H ++ + AK
Sbjct: 174 NTVIYGMDSDLIMLSLNHKKYTNSI--------------YLYRETPHFISSLDSTLDPAK 219
Query: 173 RKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECI---VDDFIFM 229
+ + D++ H+ T + + P + +E + D+I +
Sbjct: 220 EYFIDINHLADQIY---------HLLTDKTF---------DPEKQSIEAYYNKISDYILI 261
Query: 230 CFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGS 289
CF +GNDF H P + +R I +L+ +Y++ F + DG + + + +I + +
Sbjct: 262 CFLLGNDFNEHFPAINLRNNGITILLDLYREIFGVSQNIIKDG-EINWVNFKKYIFKLAN 320
Query: 290 YEDRIFQKRARLHQRHAERIKREKAQARR 318
E + ++ ++ R +++ E +
Sbjct: 321 NEHQFIKENYKIRDRLSKKFYPETTDEEK 349
Score = 57.0 bits (136), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 65/160 (40%), Gaps = 11/160 (6%)
Query: 433 EPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAP 492
E W+ RYY F+ T ++ V Y L W +YY SW+ Y YHY P
Sbjct: 371 EKHWQYRYYHSLFHIDTDKDTN-ALASVCNNYLMTLQWTFYYYSRDCVSWKHSYQYHYPP 429
Query: 493 FASDL-KDLDQFNISFELGHP-----FKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPI 546
DL K++ FN EL P P L V P S + +P N P
Sbjct: 430 LLEDLYKNIPYFNS--ELVIPVDKSIIHPHLLLAYVLPRNSLNLIPNTKISRFLIKNYP- 486
Query: 547 SDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKI 586
D Y DF+ RY W+G P ID + +++ K+
Sbjct: 487 -DHYKEDFKFQYAFCRYFWEGHVMFPEIDFQQFSNDINKL 525
>gi|284066803|gb|ADB77673.1| 5'-3' exoribonuclease II [Pogonognathellus sp. nov. A JKM-2010]
gi|284066805|gb|ADB77674.1| 5'-3' exoribonuclease II [Pogonognathellus sp. nov. A JKM-2010]
Length = 221
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 12/217 (5%)
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIRE AI+ L+ +YKK GG+LTD P L RV+ + +G ED IF+ R
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKTGGWLTDSGVPDLTRVQLIMSDLGEVEDEIFKNRQ 60
Query: 300 RLHQRHAERIKREKAQARRGDDVEPLAQPD-----SLVPVSRFHGSRLASGPSPSPYQQS 354
+ R R+K +K + + +E A + + +P ++ + S PSP +
Sbjct: 61 QNEIRFKARMKAQKKRKK----LESEANSNCYNRPAYIPHGQYAPVAIGSTPSPVQNARQ 116
Query: 355 ECVGRLDNGKGTSGRPHKV-PRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKE-LL 412
E + G T+ V + A + + ++EA + E + +
Sbjct: 117 ESINMRRMGMHTATDGSVVRSNHDAAAALKSMLIEAPSKLNDSEISESSEASTPSQSPQV 176
Query: 413 RDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKT 449
+ K D+ + + P D+V+L E G+K+RYYE KF+ +
Sbjct: 177 KRKHDSDDEEEP-NDEVRLWEDGFKDRYYESKFDVQA 212
>gi|123493433|ref|XP_001326289.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121909201|gb|EAY14066.1| hypothetical protein TVAG_478910 [Trichomonas vaginalis G3]
Length = 868
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 109/222 (49%), Gaps = 37/222 (16%)
Query: 64 LQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLD 123
L+ +I +N D W+K +VI S + VPGE E KI ++R + + P +DPN RHC+ D
Sbjct: 113 LKRWIEELINFDEYWQKPRVIFSGSKVPGEAETKIFDFLRQEIHKPEWDPNKRHCIVTND 172
Query: 124 ADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGD 183
+DLI+++L +H + I ++ Q+K + G L E AG D
Sbjct: 173 SDLILMSLRSHIPNIDIYNDI-----YQNKI----KNGML----EPYISFSAGSVD---- 215
Query: 184 EVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPT 243
++I LREYL ++F I + E I DDF+ + ND+ P +
Sbjct: 216 ----------VININLLREYLFHDFGIND-------ERIFDDFVLLVNLYSNDYRPKFDS 258
Query: 244 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQ 285
++ + +I+ L+ YK E + ++T+ +L +++ FI
Sbjct: 259 -DLSKISIDDLIETYKSEPSCI--FITEKDNVNLEKLKIFIM 297
>gi|284066729|gb|ADB77636.1| 5'-3' exoribonuclease II [Pogonognathellus longicornis]
Length = 221
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 107/214 (50%), Gaps = 6/214 (2%)
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIRE AI+ L+ +YKK GG+LT+ P L RV+ + +G ED IF+ R
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKTGGWLTNSGVPDLTRVQLIMSDLGEVEDEIFKNRQ 60
Query: 300 RLHQRHAERIKREKAQARRGDDVEP--LAQPDSLVPVSRFHGSRLASGPSPSPYQQSECV 357
+ R R+K +K + + + ++P + +P + + S PSP + E +
Sbjct: 61 QNEVRFKARMKAQKKRKKLESEANSNCYSRP-AYIPHGQLAPVAIGSTPSPVRNAREENI 119
Query: 358 GRLDNGKGTSGRPHKV-PRLSSGATIGAAIVEAENSF-ETDPQENKEEFKAKLKELLRDK 415
G T+ V + A + + ++EA + ++D + + ++ K
Sbjct: 120 SMRRAGMHTATXGSLVRSNKDAAAALKSMLIEAPSKLNDSDISDASDVSTPGQSPQVKRK 179
Query: 416 SDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKT 449
D+ + + P D+V+L E G+K+RYYE KF+ +
Sbjct: 180 HDSDDEEEP-NDEVRLWEAGFKDRYYESKFDVQA 212
>gi|340055310|emb|CCC49623.1| putative 5'-3' exonuclease XRNC [Trypanosoma vivax Y486]
Length = 871
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 105/258 (40%), Gaps = 55/258 (21%)
Query: 45 FDSNVITPGTEFMAVLSIALQYYIHLRL----------------NNDPG---WEKIKVIL 85
+DSN IT GT FM+ L+ AL +Y R N PG + ++
Sbjct: 121 WDSNSITVGTPFMSTLTYALHFYCSSRAERINVERLRQYRSTAGGNAPGDTVPVPVTFVV 180
Query: 86 SDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVV 145
D PGEGE KI +R R+ P Y+PNT H + D D+ + +L HE +LR V
Sbjct: 181 DDVWRPGEGESKIADAIRRFRSQPSYNPNTSHVICSSDTDMTVCSLILHEPRMHVLRYVY 240
Query: 146 FTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLD 205
++C+G R + GD F I+ RE L
Sbjct: 241 --------------AAENVSHCDGSGSRH----NHTGD-----SWASTFFSIFAFREELR 277
Query: 206 YEFRIP--NPPFEIDLECI----------VDDFIFMCFFVGNDFLPHMPTLEIREGAINL 253
+ R+P N E+ E + + D +F+ GNDFLP + I EG ++
Sbjct: 278 IKLRLPPCNDDAEMSAEELEQRHQRFERALHDVVFVLQLFGNDFLPSLGC-RIEEGFLDN 336
Query: 254 LMAVYKKEFRALGGYLTD 271
L+ + +F G + D
Sbjct: 337 LLDMLATDFITRGRSIVD 354
>gi|284066727|gb|ADB77635.1| 5'-3' exoribonuclease II [Pogonognathellus longicornis]
Length = 221
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 107/214 (50%), Gaps = 6/214 (2%)
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIRE AI+ L+ +YKK GG+LT+ P L RV+ + +G ED IF+ R
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKTGGWLTNSGVPDLTRVQLIMSDLGEVEDEIFKNRQ 60
Query: 300 RLHQRHAERIKREKAQARRGDDVEP--LAQPDSLVPVSRFHGSRLASGPSPSPYQQSECV 357
+ R R+K +K + + + ++P + +P + + S PSP + E +
Sbjct: 61 QNEVRFKARMKAQKKRKKLESEANSNCYSRP-AYIPHGQLAPVAIGSTPSPVRNAREENI 119
Query: 358 GRLDNGKGTSGRPHKV-PRLSSGATIGAAIVEAENSF-ETDPQENKEEFKAKLKELLRDK 415
G T+ V + A + + ++EA + ++D + + ++ K
Sbjct: 120 SMRRAGMHTATDGSLVRSNKDAAAALKSMLIEAPSKLNDSDISDASDVSTPGQSPQVKRK 179
Query: 416 SDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKT 449
D+ + + P D+V+L E G+K+RYYE KF+ +
Sbjct: 180 HDSDDEEEP-NDEVRLWEAGFKDRYYESKFDVQA 212
>gi|444523968|gb|ELV13670.1| 5'-3' exoribonuclease 1 [Tupaia chinensis]
Length = 592
Score = 81.3 bits (199), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 58/102 (56%), Gaps = 2/102 (1%)
Query: 192 YQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 249
+ LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF+PH+P L I
Sbjct: 112 FHLLHLSLMREYIDYEFSALKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHD 171
Query: 250 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYE 291
A+ LL Y LGGY+ + +L R E ++ + ++
Sbjct: 172 ALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFD 213
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 41/60 (68%)
Query: 478 GVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRK 537
GV FYPYHYAPF SD++++ I FELG PFKPF QLL V P+AS + LP Y++
Sbjct: 309 GVDIVSEFYPYHYAPFLSDIRNISTLEIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQQ 368
>gi|237831033|ref|XP_002364814.1| XRN 5'-3' exonuclease N-terminus domain-containing protein
[Toxoplasma gondii ME49]
gi|211962478|gb|EEA97673.1| XRN 5'-3' exonuclease N-terminus domain-containing protein
[Toxoplasma gondii ME49]
gi|221507695|gb|EEE33299.1| hypothetical protein TGVEG_101580 [Toxoplasma gondii VEG]
Length = 2089
Score = 81.3 bits (199), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 181 KGDEVVVPKKP--YQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFL 238
KG + V PK P F R + D P +D E ++DDF+F+ FFVGNDFL
Sbjct: 1266 KGAQAVEPKAPGVVSFSQGEGRRGFAD--------PRLLDPERLIDDFVFLSFFVGNDFL 1317
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
P +P L+I +G + L+ Y ALGGYLT +K +L R+ Q + YE FQ+
Sbjct: 1318 PGLPHLDIFQGGLATLVRSYTAALPALGGYLTLKTKINLERLRRLFQILALYEGPHFQR 1376
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 12/122 (9%)
Query: 457 RKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHP---- 512
R + L Y GL +++ YY+ W WF+P+ +AP SDL LD ++ + P
Sbjct: 1491 RAQLALDYVTGLFFLLRYYHTSKPCWSWFFPHEFAPLCSDLARLDPQALARAVALPSLRE 1550
Query: 513 ---FKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVD---MNGKRYSWQ 566
F P+ QLL V P++S+ LP YR L + ++D +P F VD + R+ ++
Sbjct: 1551 DFMFSPYAQLLAVLPASSAALLPRIYRHLPQTRD--VADMFPDTFPVDSHPFHALRFDFK 1608
Query: 567 GI 568
I
Sbjct: 1609 NI 1610
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 34 RKLPPKSDSQVF--------DSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIK-VI 84
RKL ++ S +F D+N I+PGT FM + L+ +I +L P W ++ V
Sbjct: 793 RKLCGEASSDLFAAVAPPYLDTNCISPGTTFMTLCEQTLKKFIVHKLRTSPLWRNLQCVC 852
Query: 85 LSDANVPGEGEHKIMSYVRL 104
L+ +VPGEGEHK++ +R
Sbjct: 853 LNTHSVPGEGEHKLLHLLRF 872
Score = 44.7 bits (104), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 26/39 (66%), Gaps = 5/39 (12%)
Query: 105 QRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILRE 143
Q LPG R CLYG+DADL+MLAL+ H + ILRE
Sbjct: 1098 QVALPG-----RICLYGMDADLLMLALSVHRPNLLILRE 1131
>gi|221487913|gb|EEE26145.1| XRN 5'-3' exonuclease N-terminus domain-containing protein, putative
[Toxoplasma gondii GT1]
Length = 2089
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 181 KGDEVVVPKKP--YQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFL 238
KG + V PK P F R + D P +D E ++DDF+F+ FFVGNDFL
Sbjct: 1265 KGAQAVEPKAPGVVSFSQGEGRRGFAD--------PRLLDPERLIDDFVFLSFFVGNDFL 1316
Query: 239 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
P +P L+I +G + L+ Y ALGGYLT +K +L R+ Q + YE FQ+
Sbjct: 1317 PGLPHLDIFQGGLATLVRSYTAALPALGGYLTLKTKINLERLRRLFQILALYEGPHFQR 1375
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 12/122 (9%)
Query: 457 RKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHP---- 512
R + L Y GL +++ YY+ W WF+P+ +AP SDL LD ++ + P
Sbjct: 1490 RAQLALDYVTGLFFLLRYYHTSKPCWSWFFPHEFAPLCSDLARLDPQALARAVALPSLRE 1549
Query: 513 ---FKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVD---MNGKRYSWQ 566
F P+ QLL V P++S+ LP YR L + ++D +P F VD + R+ ++
Sbjct: 1550 DFMFSPYAQLLAVLPASSAALLPRIYRHLPQTRD--VADMFPDTFPVDSHPFHALRFDFK 1607
Query: 567 GI 568
I
Sbjct: 1608 NI 1609
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 34 RKLPPKSDSQVF--------DSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIK-VI 84
RKL ++ S +F D+N I+PGT FM + L+ +I +L P W ++ V
Sbjct: 792 RKLCGEASSDLFAAVAPPYLDTNCISPGTTFMTLCEQTLKKFIVHKLRTSPLWRNLQCVC 851
Query: 85 LSDANVPGEGEHKIMSYVRL 104
L+ +VPGEGEHK++ +R
Sbjct: 852 LNTHSVPGEGEHKLLHLLRF 871
Score = 44.7 bits (104), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 26/39 (66%), Gaps = 5/39 (12%)
Query: 105 QRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILRE 143
Q LPG R CLYG+DADL+MLAL+ H + ILRE
Sbjct: 1097 QVALPG-----RICLYGMDADLLMLALSVHRPNLLILRE 1130
>gi|380470784|emb|CCF47584.1| 5'-3' exoribonuclease, partial [Colletotrichum higginsianum]
Length = 278
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 46/68 (67%)
Query: 539 MTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
MT+PNSPI DFYP DFE+DMNGKR W+ + K+PFIDE RLL ++ L++++ RN
Sbjct: 1 MTNPNSPIYDFYPRDFELDMNGKRMEWEAVVKIPFIDEKRLLSAMEPKNKLLSQDQKERN 60
Query: 599 SIMADMLF 606
+ F
Sbjct: 61 GFGVALKF 68
>gi|355729458|gb|AES09874.1| 5'-3' exoribonuclease 1 [Mustela putorius furo]
Length = 154
Score = 79.0 bits (193), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/100 (38%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
Query: 200 LREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAV 257
+REY+DYEF + F+ D+E I+DD+I M F VGNDF+PH+P L I A+ LL
Sbjct: 4 MREYIDYEFSVLKDKISFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDALPLLYGT 63
Query: 258 YKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 297
Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 64 YITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 103
>gi|284066735|gb|ADB77639.1| 5'-3' exoribonuclease II [Pogonognathellus elongatus]
Length = 221
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 105/214 (49%), Gaps = 6/214 (2%)
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIRE AI+ L+ +YKK GG+LTD P L RV+ + +G ED IF+ R
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKTGGWLTDSGVPDLTRVQLIMSDLGEVEDEIFRNRQ 60
Query: 300 RLHQRHAERIKREKAQARRGDDVEP--LAQPDSLVPVSRFHGSRLASGPSPSPYQQSECV 357
+ R R+K +K + + + ++P + +P + + S P + E +
Sbjct: 61 QNEVRFKARMKAQKKRKKLESEANSNCYSRP-AYIPHGQLAPVAIGSSSVPVRNAREENI 119
Query: 358 GRLDNGKGTSGRPHKV-PRLSSGATIGAAIVEAENSF-ETDPQENKEEFKAKLKELLRDK 415
G T+ V + A + + ++EA + ++D + + ++ K
Sbjct: 120 NMRRAGMHTATDGSLVRSNKDAAAALKSMLIEAPSKLNDSDISDASDVSTPGQSPQVKRK 179
Query: 416 SDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKT 449
D+ + + P D+V+L E G+K+RYYE KF+ +
Sbjct: 180 LDSDDEEEP-NDEVRLWEAGFKDRYYESKFDVQA 212
>gi|401412103|ref|XP_003885499.1| putative XRN 5'-3' exonuclease N-terminus domain-containing protein
[Neospora caninum Liverpool]
gi|325119918|emb|CBZ55471.1| putative XRN 5'-3' exonuclease N-terminus domain-containing protein
[Neospora caninum Liverpool]
Length = 1754
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 50/80 (62%)
Query: 217 IDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPS 276
+D E ++DDF+F+ FFVGNDFLP +P L+I +G + L+ Y ALGGYLT +K +
Sbjct: 979 LDPERLIDDFVFLSFFVGNDFLPGLPHLDIFQGGLATLVRTYTAALPALGGYLTLKTKIN 1038
Query: 277 LRRVEHFIQAVGSYEDRIFQ 296
L R+ Q + YE F+
Sbjct: 1039 LERLRRLFQILALYEGPHFE 1058
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 9/108 (8%)
Query: 457 RKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHP---- 512
R + L Y GL +++ YY+ W WF+P+ +AP SDL LD ++ + P
Sbjct: 1179 RARLALDYVTGLFFLLRYYHTSKPCWSWFFPHEFAPLCSDLARLDPAALARSVALPSVRE 1238
Query: 513 ---FKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVD 557
F P+ QLL V P++S+ LP YR L + ++D +P F VD
Sbjct: 1239 DFKFSPYAQLLAVLPASSAALLPRVYRHLPRERE--LADMFPDGFPVD 1284
>gi|402466304|gb|EJW01825.1| hypothetical protein EDEG_00349 [Edhazardia aedis USNM 41457]
Length = 1356
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 84/185 (45%), Gaps = 24/185 (12%)
Query: 114 NTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKR 173
N + +Y DADL L + + +++RE Q KC C + GHL +C+
Sbjct: 610 NNQITVYSPDADLFFLGMTLENI--TLMRE----NQQLRKCMNCQKKGHLTNDCQN---- 659
Query: 174 KAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFV 233
+ K + F+++ L+ + E PF+ + E I+ D+I +CF
Sbjct: 660 -------------ILKTLFIFVNLNLLKREIVNEI-CEKIPFKAESERIIHDYILICFLC 705
Query: 234 GNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDR 293
GNDFLP + ++R AI +L + + G YL+ + + F+ + +ED
Sbjct: 706 GNDFLPTINCFDVRFNAIEILTNNLIRFYTRFGRYLSKNGNINFKVFNQFLYYLSKHEDN 765
Query: 294 IFQKR 298
+++++
Sbjct: 766 LYRRK 770
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 50/90 (55%)
Query: 14 DAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLN 73
D + S++E+E+L + SD +D+N ITPGT FM + + YI +L
Sbjct: 424 DISSSSSEDEKLIHVLPKIEDLNDESSDYAEWDTNAITPGTYFMEKVDKTIHNYIEEKLR 483
Query: 74 NDPGWEKIKVILSDANVPGEGEHKIMSYVR 103
ND W ++VI S + V GEGE KI+ ++R
Sbjct: 484 NDKEWRNMRVIYSSSKVEGEGEQKILRFIR 513
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 449 TPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDL 497
T E E+ RK + Y +GL W ++ Y + +W +FYPYHY+P D
Sbjct: 891 TKESLEKLRKKCAIEYLKGLQWTLNLYIKKQNNWGYFYPYHYSPLLEDF 939
Score = 43.1 bits (100), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 497 LKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEV 556
LK++ Q +L P F Q + V P S L +++ + + + +P DF+
Sbjct: 1025 LKNIPQLINKNDLNSPLTLFEQSIIVLPPYSKETLHTKVKQIYENNENNLM-IFPKDFKS 1083
Query: 557 DMNGKRYSWQGIAKLPFID 575
DM K SWQ I LPF+D
Sbjct: 1084 DMFDKMLSWQSIPLLPFVD 1102
>gi|284504336|ref|YP_003407051.1| XRN1 5'-3' exonuclease [Marseillevirus]
gi|282935774|gb|ADB04089.1| XRN1 5'-3' exonuclease [Marseillevirus]
Length = 490
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 74/152 (48%), Gaps = 9/152 (5%)
Query: 432 GEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYA 491
G+ G Y+E+F K ++TR+ Y G WV YY +G W Y Y Y
Sbjct: 333 GKSGVDMDKYKEEFGLKKQRSNQQTRE-----YLRGCLWVTLYYTQGCPDNGWSYKYFYP 387
Query: 492 PFASDLKDLDQFNISFE--LGH-PFKPFNQLLGVFPSASSHALPEHYRKL-MTDPNSPIS 547
PF SD++ D + FE L H F QLL V P SSH LP ++K ++
Sbjct: 388 PFLSDIEQEDLVHEPFEQTLAHNQFSQLLQLLCVLPPHSSHLLPRKWKKYACVYQRKELA 447
Query: 548 DFYPTDFEVDMNGKRYSWQGIAKLPFIDEARL 579
+FYP + EVD GK ++ + LP +D +++
Sbjct: 448 EFYPKEIEVDYEGKFRDYESVPLLPHVDVSKV 479
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 126/317 (39%), Gaps = 76/317 (23%)
Query: 6 SRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQ 65
++RF D A++ + +R R L S ++ FD N IT GTEF+ LQ
Sbjct: 90 TKRFYVLFDGVSPVAKQSQ-----QRHRRFLG--SPTEGFDPNSITCGTEFLD----RLQ 138
Query: 66 YYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDAD 125
Y+ L N EK ++I SD ++ GEGEHK + + R P HC Y D D
Sbjct: 139 GYVRRGLENFCSKEKFELIFSDTSIAGEGEHKALFFARQN------GPEESHCFYSPDGD 192
Query: 126 LIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEV 185
L++LA+ +LR +D Q HL + G ++
Sbjct: 193 LVILAMTLEFPKTFLLR--------KDH---IQQWRHLLTDISGISQ------------- 228
Query: 186 VVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 245
++E IP + DF+F+ +GNDFLP + E
Sbjct: 229 -------------------EFEKEIP-----------IKDFVFLSCLLGNDFLPRLGMFE 258
Query: 246 IR-EGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA--RLH 302
+ L+A YK+ + L + K + ++ +G++E +F +R L
Sbjct: 259 GKFSDTAEFLLAKYKQ--KGLHIFSRKTGKFLAKNTFKILKFLGTFEKELFDERCYFELT 316
Query: 303 QRHAERIKREKAQARRG 319
++ ER+ R A G
Sbjct: 317 KQKEERVDRTLLSAYDG 333
>gi|340501949|gb|EGR28676.1| hypothetical protein IMG5_170600 [Ichthyophthirius multifiliis]
Length = 698
Score = 76.3 bits (186), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 79/151 (52%), Gaps = 24/151 (15%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR RRF A K+ + +++F+ +G ++ Q SN ++PGT FM L
Sbjct: 96 MNQQRQRRFHAQKNLNQT-------KEDFKNQGIQIK----EQTVPSNSVSPGTPFMFEL 144
Query: 61 SIALQYYIHLRL--------NNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYD 112
+ ++ + ++ D ++++ +I+SD+N GEGEHKI+ +R +N
Sbjct: 145 NKRIREHFEKKIQEEQPLNEKTDFTYKRLHIIISDSNCQGEGEHKILEVIRKHKNFK--- 201
Query: 113 PNTRHCLYGLDADLIMLALATHEVHFSILRE 143
HC+ DADLI+L+L+ ILRE
Sbjct: 202 --LTHCIVSPDADLILLSLSAIGRKILILRE 230
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 222 IVDDFIFMCFFVGNDFLPHMPTLEIREG------AINLLMAVYKKEFRALGGYLTDGSKP 275
I+DD +F+ F GNDFLP + I++ ++ L+ ++K + YL++
Sbjct: 359 ILDDIVFLSLFAGNDFLPKQNYIYIKKTFYKEQHILDKLLCLHKDYLKTAQNYLSERGII 418
Query: 276 SLRRVEHFIQAVGSYE 291
+ +F Q V + E
Sbjct: 419 QFSNILNFFQIVANLE 434
>gi|154317858|ref|XP_001558248.1| hypothetical protein BC1G_02912 [Botryotinia fuckeliana B05.10]
Length = 185
Score = 75.1 bits (183), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/91 (42%), Positives = 59/91 (64%), Gaps = 10/91 (10%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR + D E R++ +EG+++P K D+ FDSN ITPGTEFM L
Sbjct: 94 MNQQRARRFRTALDV-------ENAREKAIKEGKEMP-KEDA--FDSNSITPGTEFMQKL 143
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANVP 91
++ L+Y+I +++ D W+ +++LS VP
Sbjct: 144 TLQLKYFIAKKISEDVDWQGTEIVLSGHEVP 174
>gi|322510814|gb|ADX06128.1| putative XRNA family 5'-3' exonuclease [Organic Lake phycodnavirus
1]
Length = 465
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 107/262 (40%), Gaps = 67/262 (25%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQV-FDSNVITPGTEFMAV 59
+N Q+ + + D A ++ Q+ +R + L + D+N ITPGT FM
Sbjct: 55 LNLQKLFSPKKTFICFDGVAPLAKMVQQKQRRYKSLLTNTILGTQSDTNKITPGTLFMNE 114
Query: 60 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 119
L+ +LR D ILS + PGEGE+KI ++R + + H +
Sbjct: 115 LNT------YLRDKMDT-----HTILSGTDEPGEGENKIFHFMRRE------SEDEHHII 157
Query: 120 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLA-ANCEGKAKRKAGEF 178
YGLDADLIML+L Q K FL + + N K +
Sbjct: 158 YGLDADLIMLSLL----------------QQNYKIFLYRETKYFEYLNYINKKYDYILDI 201
Query: 179 DEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFL 238
D G ++ E +D V+++ F+CF GNDFL
Sbjct: 202 DLLGKQIC---------------EIVD-----------------VEEYCFLCFLCGNDFL 229
Query: 239 PHMPTLEIREGAINLLMAVYKK 260
PH P++ IR G I ++ +KK
Sbjct: 230 PHFPSINIRNGGIEYILHHHKK 251
>gi|72392625|ref|XP_847113.1| 5'-3' exonuclease XRNC [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62176006|gb|AAX70128.1| 5'-3' exonuclease XRNC, putative [Trypanosoma brucei]
gi|70803143|gb|AAZ13047.1| 5'-3' exonuclease XRNC, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 868
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 99/266 (37%), Gaps = 65/266 (24%)
Query: 45 FDSNVITPGTEFMAVLSIALQYYIHLRLN--------------------------NDPGW 78
+DSN I+ GT FM+ L+ AL +Y R N+
Sbjct: 118 WDSNSISVGTSFMSSLTDALHFYCASRAERINVERLREYKQRDVGKDVASAGFPANEKAA 177
Query: 79 EKIKVILSDANV--PGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEV 136
+ +SD NV PGEGE KI +R R+ P YDPNT H + D D+ + +L HE
Sbjct: 178 PSLITFVSD-NVWRPGEGESKIADAIRRFRSQPSYDPNTAHVICSSDTDVTVCSLILHEP 236
Query: 137 HFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLH 196
+ +LR H++A+ + GD F
Sbjct: 237 NIHVLRY-----------------EHVSASTAKGGNNNWQTY--AGD-----SWASTFFS 272
Query: 197 IWTLREYLDYEFRIPNP-----------PFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 245
I+ RE L RI E + D +F+ GNDFLP +
Sbjct: 273 IYAFREELRLRLRIEQTRSNTMSAEELEKLNKQFEAALHDVVFVLLLFGNDFLPSVGC-R 331
Query: 246 IREGAINLLMAVYKKEFRALGGYLTD 271
I EG ++ L+ + +F G + D
Sbjct: 332 IEEGFLDSLLEMLATDFVTRGRSIVD 357
>gi|261330307|emb|CBH13291.1| 5'-3' exonuclease XRNC, putative [Trypanosoma brucei gambiense
DAL972]
Length = 960
Score = 73.2 bits (178), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 99/266 (37%), Gaps = 65/266 (24%)
Query: 45 FDSNVITPGTEFMAVLSIALQYYIHLRLN--------------------------NDPGW 78
+DSN I+ GT FM+ L+ AL +Y R N+
Sbjct: 210 WDSNSISVGTSFMSSLTDALHFYCASRAERINVERLREYKQRDVGKDVASAGFPANEKAA 269
Query: 79 EKIKVILSDANV--PGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEV 136
+ +SD NV PGEGE KI +R R+ P YDPNT H + D D+ + +L HE
Sbjct: 270 PSLITFVSD-NVWRPGEGESKIADAIRRFRSQPNYDPNTAHVICSSDTDVTVCSLILHEP 328
Query: 137 HFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLH 196
+ +LR H++A+ + GD F
Sbjct: 329 NIHVLRY-----------------EHVSASTAKGGNNNWQTY--AGD-----SWASTFFS 364
Query: 197 IWTLREYLDYEFRIPNP-----------PFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 245
I+ RE L RI E + D +F+ GNDFLP +
Sbjct: 365 IYAFREELRLRLRIEQTCSNTMSAEELEKLNKQFEAALHDVVFVLLLFGNDFLPSVGC-R 423
Query: 246 IREGAINLLMAVYKKEFRALGGYLTD 271
I EG ++ L+ + +F G + D
Sbjct: 424 IEEGFLDSLLEMLATDFVTRGRSIVD 449
>gi|323456483|gb|EGB12350.1| hypothetical protein AURANDRAFT_17211, partial [Aureococcus
anophagefferens]
Length = 99
Score = 72.8 bits (177), Expect = 9e-10, Method: Composition-based stats.
Identities = 39/95 (41%), Positives = 53/95 (55%), Gaps = 5/95 (5%)
Query: 489 HYAPFASDLKDLDQFNISF----ELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNS 544
HYAPFA DL F G PFKP QLL V P S+H LPE R L+ +
Sbjct: 1 HYAPFACDLAAYAPLCPPFWDKKAAGEPFKPLAQLLAVIPPGSAHCLPEACR-LVMGLDR 59
Query: 545 PISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARL 579
+ +PT ++D NG+++ W+ +A LPF+DE +L
Sbjct: 60 GLELMFPTKIKMDPNGRKHQWEWVALLPFLDERKL 94
>gi|157111508|ref|XP_001651597.1| 5'-3' exoribonuclease, putative [Aedes aegypti]
gi|108868328|gb|EAT32553.1| AAEL015316-PA, partial [Aedes aegypti]
Length = 188
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 55/75 (73%), Gaps = 1/75 (1%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQV-FDSNVITPGTEFMAV 59
MNQQRSRRFRASK+AA+ AAE +++R E +G LPP+ + FDSN ITPGT FM
Sbjct: 111 MNQQRSRRFRASKEAAEKAAEVQKIRDELRAKGCILPPEKEKGAHFDSNCITPGTPFMDR 170
Query: 60 LSIALQYYIHLRLNN 74
LS LQYY+H R+NN
Sbjct: 171 LSKCLQYYVHDRMNN 185
>gi|145507546|ref|XP_001439728.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406923|emb|CAK72331.1| unnamed protein product [Paramecium tetraurelia]
Length = 214
Score = 71.6 bits (174), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/70 (48%), Positives = 49/70 (70%)
Query: 28 EFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSD 87
E + + R L + FDSN ITPGTEFM L+IALQYYI+ R+NN+P + + +I +D
Sbjct: 119 ELKAQIRTLQNTYIEKNFDSNQITPGTEFMQKLNIALQYYIYDRMNNNPLFRNVLIIFND 178
Query: 88 ANVPGEGEHK 97
+++PGEGE +
Sbjct: 179 SSIPGEGERQ 188
>gi|327409880|ref|YP_004347300.1| XRN1 5'-3' exoribonuclease [Lausannevirus]
gi|326785054|gb|AEA07188.1| XRN1 5'-3' exoribonuclease [Lausannevirus]
Length = 495
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 74/154 (48%), Gaps = 17/154 (11%)
Query: 441 YEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDL 500
Y+E F +K ++RE+++ Y G WV YY+ G W Y +HY PF SD+K
Sbjct: 352 YKEIFGSK--KQREDSQ---AFDYIRGCIWVTVYYFRGCPDNGWSYKWHYPPFLSDIK-- 404
Query: 501 DQFNISFELGHPFK------PFNQLLGVFPSASSHALPEHYRKL-MTDPNSPISDFYPTD 553
F PFK QLL V P S LP +RK +S+F+P +
Sbjct: 405 ---KEHFTGQKPFKQSVVPNQLLQLLCVLPPHSMDLLPRRWRKYGGITKREELSEFFPKE 461
Query: 554 FEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIE 587
E+D GK ++ + LP +D A + E++KI+
Sbjct: 462 VEIDYEGKFRDYENVPLLPHVDVALIQREIQKIQ 495
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 100/256 (39%), Gaps = 67/256 (26%)
Query: 45 FDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRL 104
FD N IT GTEF+ LQ Y+ L+N EK ++ S ++ GEGEHK +++ R
Sbjct: 132 FDPNSITCGTEFLD----RLQRYVERGLSNFCQKEKFDLVFSSSSEAGEGEHKALAFARN 187
Query: 105 QRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLA 164
N HC Y D DL++L +A S+LR QD Q +L
Sbjct: 188 NGN------GESHCFYSPDGDLVLLTMALGFDKVSLLR--------QDH---IQQWKYLL 230
Query: 165 ANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVD 224
+ G ++ EF + VP K + F L C+
Sbjct: 231 TDISGLSQ----EFQKD-----VPIKDFVF------------------------LSCL-- 255
Query: 225 DFIFMCFFVGNDFLPHMPTLEIR-EGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHF 283
+GNDFLP + E + L+A YK+ R + T P+ R
Sbjct: 256 --------LGNDFLPRLGMFESKFSDTAEFLIAKYKEHGRRIFSEKTGNFIPA--RAFGL 305
Query: 284 IQAVGSYEDRIFQKRA 299
+ ++E +F KR
Sbjct: 306 FSFLSTFEKELFDKRC 321
>gi|342182575|emb|CCC92054.1| putative exoribonuclease 2 [Trypanosoma congolense IL3000]
Length = 867
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 94/261 (36%), Gaps = 59/261 (22%)
Query: 45 FDSNVITPGTEFMAVLSIALQYYIHLRLNN----------------DPGWEK-------I 81
+DSN I+ GT FM+ L+ AL +Y R D G I
Sbjct: 118 WDSNSISVGTSFMSSLANALHFYCVSRTEQVNVERLREHRRRSRPVDIGSSLTEEQPPLI 177
Query: 82 KVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSIL 141
++ PGEGE KI +R R+ P YDPNT H + D D+ + +L HE H +L
Sbjct: 178 TFVVDGVWRPGEGECKITDAIRRFRSQPNYDPNTSHVICSSDTDMTVCSLILHEPHIHVL 237
Query: 142 REVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLR 201
R P + R AG+ F I R
Sbjct: 238 RYE-------------HAPRGTSKGVSDGWTRSAGD-----------SWASTFFSINAFR 273
Query: 202 EYLDYEFRIPNPPFEID-----------LECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 250
E L R+ D E + D +F+ GNDFLP + I EG
Sbjct: 274 EELRSRLRLERCANNTDTAGGVERCDRLFESALHDVVFVLLLFGNDFLPSVGC-RIEEGF 332
Query: 251 INLLMAVYKKEFRALGGYLTD 271
++ L+ + +F G + D
Sbjct: 333 LDSLLEMLATDFVTRGLSIVD 353
>gi|170574442|ref|XP_001892815.1| hypothetical protein Bm1_06725 [Brugia malayi]
gi|158601436|gb|EDP38350.1| hypothetical protein Bm1_06725 [Brugia malayi]
Length = 205
Score = 70.9 bits (172), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 204 LDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFR 263
D+ F+ PF+ +LE ++DD+I M F +GNDF+PH+P + I E A+ LL A Y +
Sbjct: 6 FDFNFQ-EKLPFDYNLESVIDDWILMGFLIGNDFIPHLPHVHIHEDALPLLYATYNEVLP 64
Query: 264 ALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 295
L GY+ + +L+R + F++ + + F
Sbjct: 65 QLDGYINEAGVLNLKRFQIFLKNFAKNDKKNF 96
>gi|71665017|ref|XP_819483.1| 5'-3' exonuclease XRNC [Trypanosoma cruzi strain CL Brener]
gi|70884786|gb|EAN97632.1| 5'-3' exonuclease XRNC, putative [Trypanosoma cruzi]
Length = 880
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 100/255 (39%), Gaps = 64/255 (25%)
Query: 45 FDSNVITPGTEFMAVLSIALQYYIHLRLN-----------------NDPGWEK----IKV 83
+DSN I+ GT FM+ L+ AL +Y R N G + I
Sbjct: 117 WDSNSISVGTPFMSRLTEALHFYCASRAERINGERLRDELQQVARGNTTGGDVPVTPITF 176
Query: 84 ILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILRE 143
I+ D PGEGE KI +R R+ YDPNT H + D D+ + +L HE +LR
Sbjct: 177 IVDDVWRPGEGESKIADAIRRFRSQSTYDPNTSHVICSSDTDVTVCSLILHEPRIHVLR- 235
Query: 144 VVFTPGQQDKCFLCGQPGHLAANCEGKAKR--KAGEF-DEKGDEVVVPKKPYQFLHIWTL 200
+ C H G A R +G + ++ GD F I
Sbjct: 236 -----------YECSPSHH-----SGGASRGGDSGSWRNQVGD-----AWASTFFSIHAF 274
Query: 201 REYLDYEFRIP-------------NPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIR 247
RE L + R+ N FE L D +F+ GNDFLP + I
Sbjct: 275 REELRNKLRLQTSRKDSAEEAERRNRQFERALH----DVVFVLLLFGNDFLPSVGC-RIE 329
Query: 248 EGAINLLMAVYKKEF 262
EG ++ L+ + +F
Sbjct: 330 EGFLDDLLELLATDF 344
>gi|70935382|ref|XP_738783.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56515278|emb|CAH77879.1| hypothetical protein PC000586.02.0 [Plasmodium chabaudi chabaudi]
Length = 117
Score = 69.7 bits (169), Expect = 8e-09, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 487 PYHYAPFASDLKDLDQFNISFE---LGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPN 543
PYHYAP SDL ++ + FE +G P+ + L+ V P + LP+ Y+ + +
Sbjct: 1 PYHYAPLCSDLLSFEKSDFFFEKVRMGKPYSAYTHLISVLPQKDKNLLPDAYKNVYAE-- 58
Query: 544 SPISDFYPTDFEVDMNGKRYSWQGIAKLPFID 575
+ F+P + ++D NGK+ +W+ I LPFI+
Sbjct: 59 DEVKSFFPDNVKIDPNGKKETWEYIVHLPFIN 90
>gi|159110732|ref|XP_001705612.1| 5'-3' exoribonuclease 2 [Giardia lamblia ATCC 50803]
gi|157433699|gb|EDO77938.1| 5'-3' exoribonuclease 2 [Giardia lamblia ATCC 50803]
Length = 1956
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 127/335 (37%), Gaps = 99/335 (29%)
Query: 3 QQRSRRFRASKD-------------AADSAAEEERLRQEFEREG----RKLPPKSDSQVF 45
QQR+RR+ + + A +E E L + G + LPP++
Sbjct: 95 QQRTRRYMGAYEKIGTKIYRDSIAGTATVLSEAELLTSQHIANGNDDDQTLPPQNVKAA- 153
Query: 46 DSNVITPGTEFMAVLSIALQYYIHLRLNND-PGWEKIKVILSDANVPGEGEHKIMSYVRL 104
I+PGT FM L L ++ ++++ PGW + V +S ++ GEGEHKIM+ +R
Sbjct: 154 ----ISPGTLFMDRLHSFLIAFVAKNVDSEAPGWVQPSVTISGWDMCGEGEHKIMAEIRR 209
Query: 105 QRNLPGYDPN----------------TRHCLYGLDADLIMLALA--THEVHFSILREVVF 146
R L + HC+ GLDAD+++L L H V+ L + F
Sbjct: 210 LRQLEELAASRADCSETSFSEFFPHHESHCICGLDADIVLLGLGLHVHNVYVLRLWQPPF 269
Query: 147 TPGQQD------------------KCF---------------------LCGQ--PGHLAA 165
D CF LC Q P
Sbjct: 270 VADTVDILESKRHPTDRELIVVDLSCFRECIVAELISNRFHNPKLLHALCHQSFPHTYMQ 329
Query: 166 NCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDD 225
+ R + E ++ G + Q IW+ P ++ D
Sbjct: 330 RLKNCYPRLSREMNDSGMLSRMSLNVLQEAFIWS--------------PLA---SALIVD 372
Query: 226 FIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKK 260
FI + FVGNDFLP +P + ++ +++ +A+Y++
Sbjct: 373 FIILTLFVGNDFLPEVPGMLVKNNSLDNCIAIYRE 407
>gi|291336200|gb|ADD95773.1| hypothetical protein [uncultured organism MedDCM-OCT-S08-C195]
Length = 231
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 72/159 (45%), Gaps = 16/159 (10%)
Query: 425 EEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQW 484
+ED + +P W+ RYYE F E + KD+ Y EGL WV YY + W+W
Sbjct: 66 KEDYIMPHQPYWENRYYESLFGK---ECGYKDIKDICENYLEGLEWVFKYYTQNCPDWKW 122
Query: 485 FYPYHYAPFASDL-------KDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRK 537
Y YHY P DL KD+ N + E PF P QL V P S + LP H
Sbjct: 123 SYHYHYPPLFKDLCQHLPTSKDVRFINETKETA-PFSPHVQLAYVLPRQSHYLLPPHIET 181
Query: 538 LMTDPNSPISDFYPTDFEV--DMNGKRYSWQGIAKLPFI 574
+++ SDFY E+ + RY W+ LP I
Sbjct: 182 YLSE---NASDFYVNQDELRYEWAFCRYFWESHVLLPSI 217
>gi|321453821|gb|EFX65022.1| hypothetical protein DAPPUDRAFT_265351 [Daphnia pulex]
Length = 125
Score = 68.9 bits (167), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 42/69 (60%)
Query: 539 MTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
M DP SPI FYP +F+VD+ G WQG+ LPF+DE RL + + LTE+E +RN
Sbjct: 1 MLDPESPIIQFYPENFDVDLKGNNKIWQGVFLLPFVDEQRLQKAIGPLLDDLTEDEKQRN 60
Query: 599 SIMADMLFV 607
+ + FV
Sbjct: 61 TFGENQYFV 69
>gi|284066799|gb|ADB77671.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 9 JKM-2010]
Length = 211
Score = 68.9 bits (167), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 12/207 (5%)
Query: 250 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 309
AI+ L+ +YKK GG+LTD P L RV+ + +G ED IF+ R + R R+
Sbjct: 1 AIDRLVNLYKKTVYKTGGWLTDSGVPDLTRVQLIMSDLGEVEDEIFKNRQQNEIRFKARM 60
Query: 310 KREKAQARRGDDVEPLAQPD-----SLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGK 364
K +K + + +E A + + +P ++ + S PSP + E + G
Sbjct: 61 KAQKKRKK----LESXANSNCYNRPAYIPHGQYAPVAIGSTPSPVQNARQESINMRRMGM 116
Query: 365 GTSGRPHKV-PRLSSGATIGAAIVEAENSF-ETDPQENKEEFKAKLKELLRDKSDAFNSD 422
T+ V + A + + ++EA + +++ ++ E ++ K D+ +
Sbjct: 117 HTATDGSVVRSNHDAAAALRSMLIEAPSKLNDSEISDSSEASTPSQSPQVKRKHDSDEEE 176
Query: 423 NPEEDKVKLGEPGWKERYYEEKFNAKT 449
P D+V+L E G+K+RYYE KF+ +
Sbjct: 177 EP-NDEVRLWEDGFKDRYYESKFDVQA 202
>gi|406601834|emb|CCH46557.1| 5'-3' exoribonuclease 1 [Wickerhamomyces ciferrii]
Length = 491
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 10/100 (10%)
Query: 45 FDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEK-IKVILSDANVPGEGEHKIMSYVR 103
D N +TPGTEFM +LS Q+ ++ P +KVI+SD+NVPGEGE KI++++R
Sbjct: 100 IDPNALTPGTEFMNMLS---QFITKCTGSHLPKLSSNVKVIISDSNVPGEGEFKIVNHIR 156
Query: 104 LQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILRE 143
Q D + + +YG+DADLI L+L+ + + R+
Sbjct: 157 EQ------DIDMKVVIYGIDADLIALSLSLKQRQVFLARQ 190
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 4/119 (3%)
Query: 420 NSDNPEEDKVK-LGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEG 478
N++ EE+ VK L + E + ++ + E+ +E +++ +Y +GL WV+ YY
Sbjct: 333 NTEKDEEENVKKLAQMECFEEHKKKVYEQNLCEKYDEL--ELIKQYYKGLHWVLRYYLGK 390
Query: 479 VCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRK 537
S+ + YPY APF SDL ++Q ++ F P +QL V P SS LP Y++
Sbjct: 391 CPSYDYVYPYDNAPFLSDLVKVNQ-DVEFVNTEPINALHQLALVIPKKSSILLPSRYKE 448
>gi|407394522|gb|EKF26964.1| 5'-3' exonuclease XRNC, putative [Trypanosoma cruzi marinkellei]
Length = 367
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 98/239 (41%), Gaps = 58/239 (24%)
Query: 45 FDSNVITPGTEFMAVLSIALQYYI----------------------HLRLNNDPGWEKIK 82
+DSN I+ GT FM+ L+ AL +Y + R +DP I
Sbjct: 117 WDSNSISVGTPFMSRLTEALHFYCASRAERMNGERLRDELQQAARGNTRGGDDPV-TPIT 175
Query: 83 VILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILR 142
I+ D PGEGE KI +R R+ P YDPNT H + D D+ + +L HE +LR
Sbjct: 176 FIVDDVWRPGEGESKIADAIRRFRSQPTYDPNTSHIICSSDTDVTVCSLILHEPRIHVLR 235
Query: 143 EVVFTPGQQDKCFLCGQPGHLAANCEGKAKR--KAGEF-DEKGDEVVVPKKPYQFLHIWT 199
+ C H G A R +G + ++ GD F I+
Sbjct: 236 ------------YECSPSHH-----SGGASRGGDSGSWRNQVGD-----AWASTFFSIYA 273
Query: 200 LREYLDYEFRI----PNPPFEID-----LECIVDDFIFMCFFVGNDFLPHMPTLEIREG 249
RE L + R+ + E++ E + D +F+ GNDFLP + I EG
Sbjct: 274 FREALRNKLRLQTSRKDSTEEVERRNRQFERALHDVVFVLLLFGNDFLPSVGC-RIEEG 331
>gi|409080082|gb|EKM80443.1| hypothetical protein AGABI1DRAFT_106623 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 345
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 70/154 (45%), Gaps = 14/154 (9%)
Query: 564 SWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEH 623
+WQG+A LPFIDE RLLD + LTEEE RN + +F SHP IY E
Sbjct: 2 AWQGVALLPFIDEKRLLDAMAIEYPNLTEEEKHRNKWGENTMFSGESHP----IYPFYE- 56
Query: 624 CKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSPVA--SMEDIMGNQVLCA 681
L K++ L+P S + G + P + SP+ DI ++ L
Sbjct: 57 --SLYGKKKKSEPVPLDPRESKALTGSVLPSPDCVPGSTYFSPLTLEGFPDIKNDRSLSV 114
Query: 682 IYKLP---DAHKHVTRPPAGVIFPKKIVQLEDLK 712
IY P H+ V P G P +++Q DL+
Sbjct: 115 IYYFPKQLTPHRSVLLP--GAKRPVRVLQANDLE 146
>gi|384246301|gb|EIE19792.1| hypothetical protein COCSUDRAFT_58521 [Coccomyxa subellipsoidea
C-169]
Length = 852
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 64/121 (52%), Gaps = 6/121 (4%)
Query: 23 ERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIK 82
+RLR++ E + KS ++ S +TPGT MA++ +L YYI RL W+ +
Sbjct: 86 QRLRRKKEAQKEA---KSGPRLLSSLGLTPGTPLMAMIQESLTYYICRRLQTS-AWQHLH 141
Query: 83 VILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILR 142
LS A V GEGE KI+S RL R P H + D+D++++AL T + +L
Sbjct: 142 FELSGATVKGEGEVKILS--RLLRPWADVQPEDTHVVIANDSDVVLMALVTPARNVFVLA 199
Query: 143 E 143
E
Sbjct: 200 E 200
>gi|159474632|ref|XP_001695429.1| single-stranded RNA 5'->3' exonuclease [Chlamydomonas reinhardtii]
gi|158275912|gb|EDP01687.1| single-stranded RNA 5'->3' exonuclease [Chlamydomonas reinhardtii]
Length = 171
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 51/89 (57%), Gaps = 11/89 (12%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQRSRRF+ SA E + +E R+G +P FDSN ITPGTEFMA L
Sbjct: 94 MNQQRSRRFK-------SAMERLKNEEEQRRKGEVVP----DDAFDSNCITPGTEFMARL 142
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDAN 89
L+++I ++ DP W+K V+ S N
Sbjct: 143 GKHLRFFIRRKMAEDPLWQKPNVVFSGRN 171
>gi|123976904|ref|XP_001314674.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121897268|gb|EAY02394.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 212
Score = 66.6 bits (161), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 51/81 (62%)
Query: 64 LQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLD 123
L+ +I +N D W+K +VI S + VPGE E KI ++R + + P +DPN RHC+ D
Sbjct: 113 LKSWIEELINFDEYWQKPRVIFSGSKVPGEAETKIFDFLRQEIHKPEWDPNKRHCIVTND 172
Query: 124 ADLIMLALATHEVHFSILREV 144
+DLI+++L +H + I ++
Sbjct: 173 SDLILMSLRSHIPNIDIYNDI 193
>gi|440796943|gb|ELR18040.1| 5'3' exoribonuclease, putative [Acanthamoeba castellanii str. Neff]
Length = 1117
Score = 66.2 bits (160), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 111/292 (38%), Gaps = 84/292 (28%)
Query: 1 MNQQRSRRF-RASKDAADSAAEEERLRQEFEREGRK-LPPKSDSQV-----FDSNVITPG 53
+ QR RR ASK + A+ + Q E E + P S +V F+ +T G
Sbjct: 100 LITQRKRRLGAASKQDRQAKAKAQPQPQVAESEAQTGAPAVSKKRVKKKGEFNLLQVTAG 159
Query: 54 TEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNL---PG 110
T FM L AL ++ RL +DP + ++ +S +VPGEGE KIM ++ N P
Sbjct: 160 TPFMYRLKNALCFWACSRLQSDPKYHFTRIYISGPDVPGEGELKIMEFIVSHANADSSPP 219
Query: 111 YDPNTR----------------------HCLYGLDADLIMLALATHEVHFSILREVVFTP 148
+P R H + G DADLI+L L+ S+L+ V
Sbjct: 220 PNPQERVFAYQTGFADQERNAEKFRRDSHLIVGTDADLILLGLS------SMLQNVFILN 273
Query: 149 GQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEF 208
Q+ GQ L IW L++ F
Sbjct: 274 TQR------GQSSKL------------------------------LFSIWEFCRSLEHSF 297
Query: 209 RIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKK 260
PF DF+ + GND+LP ++R +++ L A YKK
Sbjct: 298 -----PFRGHCNMTRLDFVLISLLQGNDYLP-----KLRGASLDRLWARYKK 339
>gi|358378678|gb|EHK16359.1| hypothetical protein TRIVIDRAFT_8924, partial [Trichoderma virens
Gv29-8]
Length = 189
Score = 66.2 bits (160), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 53/78 (67%), Gaps = 5/78 (6%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQV-----FDSNVITPGTE 55
MNQQRSRRFR++++A + +++ L + +R+ + P +DS+ FDSN ITPGT
Sbjct: 112 MNQQRSRRFRSAREAQEKEEDKKALIELLKRQNGGVFPAADSETVVKKAFDSNSITPGTP 171
Query: 56 FMAVLSIALQYYIHLRLN 73
FM +L+++L+Y+ +LN
Sbjct: 172 FMDILALSLRYWCQYKLN 189
>gi|284066791|gb|ADB77667.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 6 JKM-2010]
Length = 161
Score = 66.2 bits (160), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 63/118 (53%), Gaps = 7/118 (5%)
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIRE AI+ L+ +YKK GG+LTD P L RV+ + +G ED IF+ R
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKTGGWLTDSGVPDLTRVQLIMSDLGEVEDEIFKNRQ 60
Query: 300 RLHQRHAERIKREKAQARRGDDVEPLAQPDSL-VPVSRFHG--SRLASGPSPSPYQQS 354
+ R R+K K + + +E A + P HG + +A G +PSP Q +
Sbjct: 61 QNEIRFKARMKANKKRKK----LESEANSNCYNRPAYIPHGQYAPVAIGSTPSPVQNA 114
>gi|407868229|gb|EKG08789.1| 5'-3' exonuclease XRNC, putative [Trypanosoma cruzi]
Length = 879
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 97/252 (38%), Gaps = 58/252 (23%)
Query: 45 FDSNVITPGTEFMAVLSIALQYYIHLRLN-----------------NDPGWEK----IKV 83
+DSN I+ GT FM+ L+ AL +Y R N G + I
Sbjct: 117 WDSNSISVGTPFMSRLTEALHFYCASRAERINGERLRDELQQVARGNTTGGDVPVTPITF 176
Query: 84 ILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILRE 143
I+ D PGEGE KI +R R+ YDPNT H + D D+ + +L HE +LR
Sbjct: 177 IVDDVWRPGEGESKIADAIRRFRSQSTYDPNTSHIICSSDTDVTVCSLILHEPRIHVLR- 235
Query: 144 VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREY 203
+ C P H G + G+ ++ V F I R
Sbjct: 236 -----------YEC-SPSH-----HGGGASRGGDSGSWRNQ-VGDAWASTFFSIHAFRGE 277
Query: 204 LDYEFRIP-------------NPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 250
L + R+ N FE L D +F+ GNDFLP + I EG
Sbjct: 278 LRNKLRLQTSRKDSAEEAERRNRQFERALH----DVVFVLLLFGNDFLPSVGC-RIEEGF 332
Query: 251 INLLMAVYKKEF 262
++ L+ + +F
Sbjct: 333 LDDLLELLATDF 344
>gi|385303536|gb|EIF47602.1| 5 -3 exoribonuclease 1 [Dekkera bruxellensis AWRI1499]
Length = 174
Score = 65.1 bits (157), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/82 (41%), Positives = 55/82 (67%), Gaps = 10/82 (12%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQR+RRFR++ +A E +++ ER G ++P ++ FDSN ITPGT+FMA +
Sbjct: 93 MNQQRARRFRSAVEA------EXNMKKAIER-GDEIPKEAP---FDSNAITPGTDFMAKV 142
Query: 61 SIALQYYIHLRLNNDPGWEKIK 82
+ L+YYI+ +++ D W+ I+
Sbjct: 143 TEHLKYYINQKVSTDSNWQSIQ 164
>gi|302837081|ref|XP_002950100.1| hypothetical protein VOLCADRAFT_104606 [Volvox carteri f.
nagariensis]
gi|300264573|gb|EFJ48768.1| hypothetical protein VOLCADRAFT_104606 [Volvox carteri f.
nagariensis]
Length = 1148
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 3/122 (2%)
Query: 15 AADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNN 74
A D A +L + +R +K + + ITPGT FM L+ +L Y+ +++
Sbjct: 74 AVDGPAPLAKLLTQRDRRKKKGRSVDEGETLTGVAITPGTTFMLDLTHSLTYFCCTKMSG 133
Query: 75 DPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATH 134
+ + LSD+NV GEGE K++ RL R +P H ++G DADLI++AL ++
Sbjct: 134 K-RYRHLLFELSDSNVMGEGEVKVLG--RLARPWHPGNPKDTHVIFGDDADLILMALTSY 190
Query: 135 EV 136
+V
Sbjct: 191 KV 192
>gi|6599262|emb|CAB63749.1| hypothetical protein [Homo sapiens]
Length = 1159
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Query: 540 TDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
T+ +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +RN
Sbjct: 1 TNEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDE-RLLEAMETCNHSLKKEERKRN 58
>gi|351706558|gb|EHB09477.1| 5'-3' exoribonuclease 2 [Heterocephalus glaber]
Length = 176
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 45/66 (68%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
MNQQ SRRFRASK+ ++A E++ +R+E +G LPP+ + FDS TPGTEFM L
Sbjct: 111 MNQQLSRRFRASKEGMEAAMEKQHVREETLAKGGYLPPEQIKERFDSYCTTPGTEFMDNL 170
Query: 61 SIALQY 66
+ +L Y
Sbjct: 171 AKSLCY 176
>gi|224065925|ref|XP_002301984.1| predicted protein [Populus trichocarpa]
gi|222843710|gb|EEE81257.1| predicted protein [Populus trichocarpa]
Length = 158
Score = 64.7 bits (156), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 59/104 (56%), Gaps = 14/104 (13%)
Query: 825 YDGGYSQHYASNTSHHPNRRYHPQYDRNS--SGEHPTHLYNPSGIHQNGGPRYPPRPMGS 882
YD GY +N S+ RR PQ +R + SG HP H+Y+P HQNG PRYP P+
Sbjct: 13 YDHGYGS-AGANPSY---RRSRPQNERENQMSGPHPRHVYHPPEFHQNGRPRYPHGPVEH 68
Query: 883 TSSGANLYPPQGGYSG---YQSPAAGSFNQWGG-----ANQSMP 918
TS+G + Y QGGY YQSP AGS QWGG AN S P
Sbjct: 69 TSTGTSTYAYQGGYDAYQSYQSPGAGSHQQWGGRFPPPANHSNP 112
>gi|449017059|dbj|BAM80461.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 695
Score = 64.3 bits (155), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 45/216 (20%)
Query: 46 DSNVITPGTEFMAVLSIALQYYIHLRLNNDP-GWEKIKVILSDANVPGEGEHKIMSYVRL 104
D ++PGTE M + A+++Y+ RL + ++ ++ ++S VPGEGE KI+ Y+
Sbjct: 115 DVLSLSPGTELMQLTLQAVEFYVCSRLQSKRHLYQNVRFVVSGPTVPGEGEIKIIDYIHR 174
Query: 105 QRNLPGYDPNTRHCLYGLDADLIMLALATHEV-HFSILREVVFTPGQQDKCFLCGQPGHL 163
DP + G DADL++L LAT +V +F + V TP + + P H
Sbjct: 175 Y-----VDPQHSVVVIGSDADLVVLGLATQKVRNFFVF---VITP----RANMQDAPEH- 221
Query: 164 AANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIV 223
G A+++ + +V + +W LD F P +DL
Sbjct: 222 -----GTAQKR------QAISAIV-------ISVWQWIRVLDRFFPGETPSLRLDL---- 259
Query: 224 DDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYK 259
+ M GND+LP ++R + N + YK
Sbjct: 260 ---VVMLMMQGNDYLP-----KLRGTSFNSIWEAYK 287
>gi|281206449|gb|EFA80635.1| 5'-3' exoribonuclease [Polysphondylium pallidum PN500]
Length = 1127
Score = 63.2 bits (152), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 520 LGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARL 579
+ V P S++ LP YR+LM +SPI+DFYP +FEVD + Y + GIA + F D ARL
Sbjct: 1 MSVLPPQSAYLLPAPYRRLMESDDSPIADFYPKEFEVDTSDPHY-FDGIAIIGFPDLARL 59
Query: 580 LDEVKKIE-HTLTEEEARRNSI 600
++ K + + LT E RN++
Sbjct: 60 VEATKDEDSYDLTPRERMRNTL 81
>gi|401422387|ref|XP_003875681.1| putative 5'-3' exonuclease XRNC [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322491920|emb|CBZ27193.1| putative 5'-3' exonuclease XRNC [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 1070
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 30/136 (22%)
Query: 37 PPKSDSQVFDSNVITPGTEFMAVLSIALQYYI---------------HLRLNN------- 74
P + + ++DSN I+ GT FMA ++ AL +Y +R++
Sbjct: 133 PAGNINDLWDSNCISVGTRFMAKVTEALHFYAVSRTERINAKRLREERVRIDKADASVDS 192
Query: 75 ---DPGWEK-----IKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADL 126
D E I +I+ D PGEGE+KI ++R R P Y PNT H + D D+
Sbjct: 193 AAGDSTGESYVFPFISIIVDDVLRPGEGENKIAEFIRRIRADPSYGPNTSHVICSSDTDV 252
Query: 127 IMLALATHEVHFSILR 142
+ +L HE +LR
Sbjct: 253 TVTSLILHEPRIHVLR 268
>gi|157869656|ref|XP_001683379.1| putative 5'-3' exonuclease XRNC [Leishmania major strain Friedlin]
gi|68126444|emb|CAJ04205.1| putative 5'-3' exonuclease XRNC [Leishmania major strain Friedlin]
Length = 1068
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 30/136 (22%)
Query: 37 PPKSDSQVFDSNVITPGTEFMAVLSIALQYYI---------------HLRLNN-DPGWEK 80
P + + ++DSN I+ GT FMA ++ AL +Y +R++ D +
Sbjct: 133 PAGNINDLWDSNCISVGTRFMAKVTEALHFYAVSRTERINAKRLREEQVRIDKADASVDS 192
Query: 81 --------------IKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADL 126
I +I+ D PGEGE+KI ++R R P Y PNT H + D D+
Sbjct: 193 AASDSAGAPYVFPFISIIVDDVLRPGEGENKIAEFIRRIRADPSYGPNTSHVICSSDTDV 252
Query: 127 IMLALATHEVHFSILR 142
+ +L HE +LR
Sbjct: 253 TVTSLILHEPRIHVLR 268
>gi|330800198|ref|XP_003288125.1| hypothetical protein DICPUDRAFT_87898 [Dictyostelium purpureum]
gi|325081816|gb|EGC35318.1| hypothetical protein DICPUDRAFT_87898 [Dictyostelium purpureum]
Length = 171
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 11/90 (12%)
Query: 1 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 60
+NQQR RRF S +E+L+Q+ +G+ +P +F+ ITPGT+FM L
Sbjct: 93 INQQRQRRFL-------SVHRDEKLKQQLIADGKPVP----EVIFNRTAITPGTQFMYNL 141
Query: 61 SIALQYYIHLRLNNDPGWEKIKVILSDANV 90
S ALQ+YI +++ D W +++VI S V
Sbjct: 142 SEALQFYIKKKISEDLSWREVQVIFSGPEV 171
>gi|253744666|gb|EET00835.1| 5'-3' exoribonuclease 2 [Giardia intestinalis ATCC 50581]
Length = 1956
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 78/174 (44%), Gaps = 39/174 (22%)
Query: 3 QQRSRRFRAS-------------KDAADSAAEEERLRQEFEREG----RKLPPKSDSQVF 45
QQR RR+ S A+ +E E L G R LPP++
Sbjct: 95 QQRVRRYMGSYQKEGSTLYKEKIAGTANVLSEAELLASRHIANGNSDDRSLPPQNVK--- 151
Query: 46 DSNVITPGTEFMAVLSIALQYYIHLRLNND-PGWEKIKVILSDANVPGEGEHKIMSYVRL 104
I+PGT FM L L ++ ++++ PGW V +S ++ GEGEHKIM+ ++
Sbjct: 152 --TAISPGTLFMDRLHSFLIAFVAKNVDSEAPGWVHPSVTISGWDMCGEGEHKIMTEIKR 209
Query: 105 QRNLP-----GYDPNTR-----------HCLYGLDADLIMLALATHEVHFSILR 142
+ L G D + + HC+ GLDAD+I+L L H + +LR
Sbjct: 210 IKQLEEQAAIGVDYSEKSFSEFFPYHESHCICGLDADIILLGLGVHVQNVYLLR 263
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 222 IVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVE 281
++ DFI + FVGNDFLP +P + I+ G+++ +A+Y++ YL D +++++
Sbjct: 369 LIVDFIILTLFVGNDFLPEVPGMLIKNGSLDNCIAIYRELLA--DTYLLDDLCKNIKKIY 426
Query: 282 H 282
H
Sbjct: 427 H 427
>gi|146163589|ref|XP_001011880.2| hypothetical protein TTHERM_00393040 [Tetrahymena thermophila]
gi|146145991|gb|EAR91635.2| hypothetical protein TTHERM_00393040 [Tetrahymena thermophila
SB210]
Length = 974
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 1/123 (0%)
Query: 432 GEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYA 491
GE G+K+++Y + R + +Y EG+ W YY +W W Y YH+A
Sbjct: 511 GERGYKDQFYLS-VGKYDQSDLSTLRPSITQKYFEGVVWHFASYYGEYPAWNWEYNYHFA 569
Query: 492 PFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYP 551
PFA D+ L + I F P ++ + + S LP ++ + S ++D +P
Sbjct: 570 PFAEDMNKLSELQIKFFRQPPLTNSQYMIIMSNQSYSSKLPHELKEKIYGEQSNLADLFP 629
Query: 552 TDF 554
F
Sbjct: 630 LSF 632
>gi|398015544|ref|XP_003860961.1| 5'-3' exonuclease XRNC, putative [Leishmania donovani]
gi|322499185|emb|CBZ34256.1| 5'-3' exonuclease XRNC, putative [Leishmania donovani]
Length = 1068
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 30/136 (22%)
Query: 37 PPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGW----EKIKVILSDANV-- 90
P + + ++DSN I+ GT FMA ++ AL +Y R E++++ +DA+V
Sbjct: 133 PAGNINDLWDSNCISVGTRFMAKVTEALHFYAVSRTERINAKRLREERVRIDKADASVDS 192
Query: 91 ------------------------PGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADL 126
PGEGE+KI ++R R P Y PNT H + D D+
Sbjct: 193 AAGDSAGAPYVFPFLSIIVDDVLRPGEGENKIAEFIRRIRADPSYGPNTSHVICSSDTDV 252
Query: 127 IMLALATHEVHFSILR 142
+ +L HE +LR
Sbjct: 253 TVTSLILHEPRIHVLR 268
>gi|284066717|gb|ADB77630.1| 5'-3' exoribonuclease II [Harlomillsia oculata]
Length = 126
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 42/71 (59%)
Query: 240 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
H+P+LEIRE AI+ L+ +YKK GGYLT+ P L RV+ + +G ED IF+ R
Sbjct: 1 HLPSLEIRENAIDRLVELYKKTVYKTGGYLTNSGIPDLTRVQLIMSDLGEVEDEIFRNRQ 60
Query: 300 RLHQRHAERIK 310
+ R+K
Sbjct: 61 ESDIKFKARMK 71
>gi|339898255|ref|XP_003392512.1| putative 5'-3' exonuclease XRNC [Leishmania infantum JPCM5]
gi|321399477|emb|CBZ08676.1| putative 5'-3' exonuclease XRNC [Leishmania infantum JPCM5]
Length = 1068
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 30/136 (22%)
Query: 37 PPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGW----EKIKVILSDANV-- 90
P + + ++DSN I+ GT FMA ++ AL +Y R E++++ +DA+V
Sbjct: 133 PAGNINDLWDSNCISVGTRFMAKVTEALHFYAVSRTERINAKRLREERVRIDKADASVDS 192
Query: 91 ------------------------PGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADL 126
PGEGE+KI ++R R P Y PNT H + D D+
Sbjct: 193 AAGDSAGAPYVFPFLSIIVDDVLRPGEGENKIAEFIRRIRADPSYGPNTSHVICSSDTDV 252
Query: 127 IMLALATHEVHFSILR 142
+ +L HE +LR
Sbjct: 253 TVTSLILHEPRIHVLR 268
>gi|308160629|gb|EFO63105.1| 5'-3' exoribonuclease 2 [Giardia lamblia P15]
Length = 1954
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 82/174 (47%), Gaps = 39/174 (22%)
Query: 3 QQRSRRFRASKDA-------------ADSAAEEERLRQEFEREG----RKLPPKSDSQVF 45
QQR+RR+ + ++ A +E E L + G + LPP++
Sbjct: 95 QQRTRRYMGAYESVGVKLYRNNIAGTATILSEVEFLTSKHIANGNNDDQTLPPQNLKAA- 153
Query: 46 DSNVITPGTEFMAVLSIALQYYIHLRLNND-PGWEKIKVILSDANVPGEGEHKIMSYVRL 104
I+PGT FM L L ++ ++++ PGW + V +S ++ GEGEHKIM+ +R
Sbjct: 154 ----ISPGTLFMDRLHSFLIAFVAKNVDSEAPGWVQPAVTISGWDMCGEGEHKIMAEIRR 209
Query: 105 QRNLP-----GYDPNTR-----------HCLYGLDADLIMLALATHEVHFSILR 142
+ L G D + + HC+ GLDAD+++L L H + ILR
Sbjct: 210 LKRLEDLATIGVDYSEKSFSEFFPHHESHCICGLDADIVLLGLGLHVHNVYILR 263
Score = 43.1 bits (100), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 28/39 (71%)
Query: 222 IVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKK 260
++ DFI + FVGNDFLP +P + I+ +++ +A+Y++
Sbjct: 369 LIVDFIILTLFVGNDFLPEVPGMLIKNNSLDNCIAIYRE 407
>gi|70929849|ref|XP_736923.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56511875|emb|CAH76238.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 279
Score = 60.1 bits (144), Expect = 6e-06, Method: Composition-based stats.
Identities = 34/116 (29%), Positives = 61/116 (52%), Gaps = 10/116 (8%)
Query: 192 YQFLHIWTLRE--------YLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPT 243
++ L I+ LR Y++ + N F I+ ++DD +F+ F VGNDFLPH+P
Sbjct: 108 FEILDIYKLRSSIKTQIATYINKLKKEKNIIFSINR--VIDDIVFLSFLVGNDFLPHIPN 165
Query: 244 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 299
++I EG++N ++ Y Y+T K + R++ ++ + E + F+KR
Sbjct: 166 IDINEGSMNEILNSYIFYIYKYSNYITYKDKVHIERLKIILKILSGQEFQYFKKRG 221
Score = 47.0 bits (110), Expect = 0.051, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 433 EPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQW 484
E +K YY KF P++ ++ +V +Y EGL W +HYY+ G SW W
Sbjct: 232 EQKYKSYYYFHKFGVSDPKQIQQ----IVKKYIEGLFWNLHYYHFGCASWHW 279
>gi|71656489|ref|XP_816791.1| 5'-3' exonuclease XRNC [Trypanosoma cruzi strain CL Brener]
gi|70881942|gb|EAN94940.1| 5'-3' exonuclease XRNC, putative [Trypanosoma cruzi]
Length = 282
Score = 59.3 bits (142), Expect = 1e-05, Method: Composition-based stats.
Identities = 40/119 (33%), Positives = 54/119 (45%), Gaps = 21/119 (17%)
Query: 45 FDSNVITPGTEFMAVLSIALQYYIHLRLN-----------------NDPGWE----KIKV 83
+DSN I+ GT FM+ L+ AL +Y R N G + I
Sbjct: 117 WDSNSISVGTPFMSRLTEALHFYCASRAERINGERLRDELQQVARGNTTGGDVPVTPITF 176
Query: 84 ILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILR 142
I+ D PGEGE KI +R R+ YDPNT H + D D+ + +L HE +LR
Sbjct: 177 IVDDVWRPGEGESKIADAIRRFRSQSTYDPNTSHVICSSDTDVTVCSLILHEPRIHVLR 235
>gi|389601315|ref|XP_001565132.2| putative 5'-3' exonuclease XRNC [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322504991|emb|CAM36567.2| putative 5'-3' exonuclease XRNC [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 1065
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 61/136 (44%), Gaps = 30/136 (22%)
Query: 37 PPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGW----EKIKVILSDANV-- 90
P + + ++DSN I+ GT FMA ++ AL +Y R E++++ +DA+V
Sbjct: 133 PAGNINDLWDSNCISVGTRFMAKVTEALHFYAVSRTERINAKRLREERVRIASADASVDS 192
Query: 91 ------------------------PGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADL 126
PGEGE+KI ++R R Y PNT H + D D+
Sbjct: 193 AARDSAGLPYAFPFLNIIVDDVLRPGEGENKIAEFIRRIRADSSYGPNTSHVICSSDTDV 252
Query: 127 IMLALATHEVHFSILR 142
+ +L HE +LR
Sbjct: 253 TVTSLILHEPRIHVLR 268
>gi|428181808|gb|EKX50671.1| hypothetical protein GUITHDRAFT_66805 [Guillardia theta CCMP2712]
Length = 249
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 91/217 (41%), Gaps = 44/217 (20%)
Query: 50 ITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLP 109
ITPGT+FM + A +YY LRL ++ + +S A+V GEGE KI+ ++ NL
Sbjct: 75 ITPGTKFMQTMREACEYYAALRLVASAKFKNVAFYISGADVAGEGEIKIIEWI---HNLL 131
Query: 110 GYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEG 169
+ + + G DADL++ LA V + +F +D + P
Sbjct: 132 QNQNDEKIIIVGGDADLVLQGLAVLRV------KDLFVYAGKD---MSQHP--------- 173
Query: 170 KAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFM 229
+ RKA KG P L +W + L+ F P + + D I +
Sbjct: 174 -SSRKA-----KGKS-----SPSIVLSMWEVVRSLERLF--PGQS-----QAVRADLIVL 215
Query: 230 CFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALG 266
GND+LP ++R G+ YKK +G
Sbjct: 216 MIMNGNDYLP-----KVRGGSFESFFRAYKKVKAMIG 247
>gi|356514619|ref|XP_003526003.1| PREDICTED: uncharacterized protein LOC100816494 [Glycine max]
Length = 307
Score = 58.2 bits (139), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/36 (66%), Positives = 29/36 (80%)
Query: 485 FYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLL 520
FYPYH+APFASDLK L + +ISF LG PFKP ++ L
Sbjct: 85 FYPYHHAPFASDLKGLGELDISFRLGTPFKPIDRGL 120
>gi|298715566|emb|CBJ28119.1| 5\'->3\' exoribonuclease, putative [Ectocarpus siliculosus]
Length = 813
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 79/192 (41%), Gaps = 55/192 (28%)
Query: 50 ITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLP 109
++PGT+FM ++ A++YY P ++ +K +S ANVPGEGE K + ++ +++P
Sbjct: 127 LSPGTKFMEDVASAMEYYAFQECTR-PCYQGVKFYISGANVPGEGELKCIDWL---KHMP 182
Query: 110 GYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEG 169
P+ + G DADLI+ LA EV F+C Q
Sbjct: 183 --KPDESAVIVGGDADLILQGLALSEVK---------------NTFICSQT--------- 216
Query: 170 KAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFM 229
AG Y+ IW + L+ F + IDL ++
Sbjct: 217 ----DAGS--------------YRLSSIWEVVRSLEAMFPGQSALVRIDLAVLI------ 252
Query: 230 CFFVGNDFLPHM 241
GND+LP +
Sbjct: 253 -MLNGNDYLPKV 263
>gi|407040012|gb|EKE39936.1| 5'-3' exonuclease domain containing protein, partial [Entamoeba
nuttalli P19]
Length = 70
Score = 57.4 bits (137), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/65 (43%), Positives = 38/65 (58%)
Query: 539 MTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 598
M SPIS+FYP F++D NG++ ++ I L FID+ +LL VK IE L + RRN
Sbjct: 1 MKSNGSPISEFYPDTFKLDFNGEKVDYKAIVVLTFIDQEKLLHYVKPIEKKLKGDAKRRN 60
Query: 599 SIMAD 603
D
Sbjct: 61 RRYGD 65
>gi|412985578|emb|CCO19024.1| predicted protein [Bathycoccus prasinos]
Length = 1002
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 66/128 (51%), Gaps = 4/128 (3%)
Query: 23 ERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIK 82
+R R+ G + P +D ITPG+ + A++YYI +++ + I
Sbjct: 132 QRRRRVRLSSGEREPLSTDLSRMMKLGITPGSRLALKVDRAIEYYIASKVHREDFGPDIL 191
Query: 83 VILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALA---THEVHFS 139
LS VPGEGE K++ ++L++ P + +T HC+ D+D I+LAL T +V S
Sbjct: 192 YELSGTTVPGEGEIKLVRAMQLRQENPNFQNHT-HCVVSEDSDAILLALTVNPTMDVFVS 250
Query: 140 ILREVVFT 147
+ +VF+
Sbjct: 251 GAQRLVFS 258
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.136 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,647,605,336
Number of Sequences: 23463169
Number of extensions: 915124431
Number of successful extensions: 2921043
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1568
Number of HSP's successfully gapped in prelim test: 8354
Number of HSP's that attempted gapping in prelim test: 2778595
Number of HSP's gapped (non-prelim): 80490
length of query: 1010
length of database: 8,064,228,071
effective HSP length: 153
effective length of query: 857
effective length of database: 8,769,330,510
effective search space: 7515316247070
effective search space used: 7515316247070
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 82 (36.2 bits)