BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001808
(1010 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FNP1|PEX1_ARATH Peroxisome biogenesis protein 1 OS=Arabidopsis thaliana GN=PEX1 PE=2
SV=2
Length = 1130
Score = 1119 bits (2895), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 603/1014 (59%), Positives = 747/1014 (73%), Gaps = 28/1014 (2%)
Query: 1 MELE--VRVVGGVENCFVSLPLKLIETLESTRSAHLLPQVLSLELRSRSNQRWVVAWSGA 58
ME E V V GV +CFVSLP +L+ L+ST S+ L +L +ELRS ++RW VAWSG+
Sbjct: 14 METEAVVNTVAGV-DCFVSLPRQLLHALQSTSSSPLP-PLLPVELRS-GDRRWSVAWSGS 70
Query: 59 TSSSSFIEVARQFAECISLADHTIVQVRVVSNVLKATLVTIEPLTEDDWEVLELNSEHAE 118
+SSSS IE+AR FAE ISL D T+V+VRV+ NV KATLVT+EP TEDDWEVLELN+E AE
Sbjct: 71 SSSSSAIEIARVFAESISLPDGTVVKVRVLPNVPKATLVTVEPETEDDWEVLELNAELAE 130
Query: 119 AAILNQVRIVHEAMRFPLWLHGRTIITFHVVSTFPKKPVVQLVPGTEVAVAPKRRKNNVK 178
AAIL+QVRI+HE M+FPLWLH RT+I F VVSTFP K VVQLVPGTEVAVAPKRR N+K
Sbjct: 131 AAILSQVRILHETMKFPLWLHDRTVIRFSVVSTFPSKGVVQLVPGTEVAVAPKRRDRNLK 190
Query: 179 KHEDSYMQAFNESTSIAKALLRVQDSDEGLSHKCNVKGVELGVALTSVAFINPETAENVS 238
+ + N KALLRVQ++D H+ +VKG EL VALTS+A+I+PETA+ S
Sbjct: 191 AKKSQEKECNN-----VKALLRVQETDRSAFHEADVKGFELRVALTSIAYIHPETAKKHS 245
Query: 239 LCSLELVAILPRLSSKENNPENNAPRIKSNLTSKEISGGASTDKKECRQAVVHLLFSDSV 298
L SL+L+++ PR+ K + ++ A +K++ SK G S+ KKE RQA++ L+FSD
Sbjct: 246 LESLQLISVSPRIPLKGSAKKDEALNMKNSEASKVAENGTSSAKKEPRQAILRLVFSDLA 305
Query: 299 AKGHVKIARALRLYLNAGLHSWVYLKKCTVNLKKEIPMVSLSPCHFKMLEKDKAFGIGLE 358
AKGH+ + +LRLYL AGLHSWVYL+ C VN KEIP +SLSPC FK+ E +K G +
Sbjct: 306 AKGHLMMVESLRLYLGAGLHSWVYLRGCNVNEDKEIPALSLSPCVFKISENEKVLDKGTD 365
Query: 359 -LDNKNHKTKKMLEKTSSGIYMDDGDLSAEDDIIAALSSEPSSKEDEEAVYQFENKKGLE 417
L N N K + Y+D D S D ++ ALSSE E +NKKGLE
Sbjct: 366 RLGNNNSVRKSSHPPSGLSTYVDVVDWSVHDKVVTALSSEGLHDEGNHD----KNKKGLE 421
Query: 418 CLLHTWLLAQLTAVASNIGSEFNTLVLSNETLLHFEVKGYKSGTYGKVPASCNGALENKT 477
L W LAQL A+AS G + ++L++ ET HFEV+G +S S N E+
Sbjct: 422 YLTRLWSLAQLDAMASVTGVDVSSLIVGRETFFHFEVRGLESYKSIDGQPSVNDRWESGK 481
Query: 478 KARELRTEIFCVLTFSEESLHGGKNNAYELTLEARGQQNNNTEAVRQLFGKLNSGDSVSF 537
K + EI V+T S+ESL G K Y+L+L+ R ++++N + + K+N G+ +
Sbjct: 482 KDKHTPLEILYVMTVSDESLLGDKFAGYDLSLD-RSEKSDNVVHIEPVLEKMNLGEPIYL 540
Query: 538 YTVKERGSTQGFDSNVSSLSWMGTTASDVINRIKVLLSPDSGLWFSTYHLPLPGHILIHG 597
+ KE +G ++SSL+WMG SDVI R+ VLLSP +G+WFS + +P PGHILI+G
Sbjct: 541 KSAKETHCNKGVSPDISSLTWMGPIVSDVIKRMTVLLSPAAGMWFSKFKIPSPGHILIYG 600
Query: 598 PPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEALDHAPS 657
PPGSGKT LA+A AK E KDL+AH++ V CS L+LEK I LS+ I+E L+HAPS
Sbjct: 601 PPGSGKTILARAAAKYFEEQKDLLAHVILVSCSTLALEKVQHIHHVLSSVIAEGLEHAPS 660
Query: 658 IVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGPIAFVASAQ 717
++I D+LDSIISSSSD EG+Q S V LTKFL D++D+YGE R SSCGIGP+AFVAS Q
Sbjct: 661 VIILDDLDSIISSSSDTEGTQASVGVTMLTKFLTDVIDDYGEYRNSSCGIGPLAFVASVQ 720
Query: 718 SLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDVASKCDGYD 777
SLE+IPQ+L+SSGRFDFHVQL APA SER AIL+HEIQ+R L+CS++ILL++A+KC+GYD
Sbjct: 721 SLEQIPQTLSSSGRFDFHVQLAAPATSERGAILKHEIQKRLLDCSEDILLNLAAKCEGYD 780
Query: 778 AYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFSQAMHEFLPVAMRDITKTSAE 837
AYDLEILVDR VHAA+GR+L +S+ K+ LV++DF++AMH+F+PVAMRDITK+++E
Sbjct: 781 AYDLEILVDRAVHAAIGRHLPLESNISKY---NLVKEDFTRAMHDFVPVAMRDITKSASE 837
Query: 838 GGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGA 897
GGR GW+DVGG+TDI+NAIKEMIELPSKFP IFA++PLRLRSNVLLYGPPGCGKTHIVGA
Sbjct: 838 GGRLGWEDVGGVTDIKNAIKEMIELPSKFPKIFAKSPLRLRSNVLLYGPPGCGKTHIVGA 897
Query: 898 AAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDN 957
AAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKA AAAPC+LFFDEFDSIAPKRGHDN
Sbjct: 898 AAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCILFFDEFDSIAPKRGHDN 957
Query: 958 TGVTDRVVNQFLTELDGVEVLTGVFVFAATR---------LEFFHYNVLLFCSF 1002
TGVTDRVVNQFLTELDGVEVLTGVFVFAAT L + LL C F
Sbjct: 958 TGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDPALLRPGRLDRLLLCDF 1011
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 111/261 (42%), Gaps = 42/261 (16%)
Query: 564 SDVINRIKVLLSPDSGL--WFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLV 621
+D+ N IK ++ S F+ L L ++L++GPPG GKT + A A +
Sbjct: 850 TDIKNAIKEMIELPSKFPKIFAKSPLRLRSNVLLYGPPGCGKTHIVGAAAAA-------- 901
Query: 622 AHIVFVCCSRLSLEKGPII--------RQALSNFISEALDHAPSIVIFDNLDSIISSSSD 673
C R KGP + QA+ + S+A AP I+ FD DSI
Sbjct: 902 ------CSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCILFFDEFDSIA----- 950
Query: 674 PEGSQPSTSVI--ALTKFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGR 731
P+ +T V + +FL ++ G F A+++ + + +L GR
Sbjct: 951 PKRGHDNTGVTDRVVNQFLTEL-------DGVEVLTGVFVFAATSRP-DLLDPALLRPGR 1002
Query: 732 FDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLD-VASKCDGYDAYDLEILVDRTVH 790
D + P+ ER IL + R L +D+I L+ +A +G+ DL+ L+
Sbjct: 1003 LDRLLLCDFPSPPERLEILT--VLSRKLLMADDIDLEPIALMTEGFSGADLQALLSDAQL 1060
Query: 791 AAVGRYLHSDSSFEKHIKPTL 811
AAV YL+ + E P +
Sbjct: 1061 AAVHEYLNREDKPETGTTPII 1081
>sp|O43933|PEX1_HUMAN Peroxisome biogenesis factor 1 OS=Homo sapiens GN=PEX1 PE=1 SV=1
Length = 1283
Score = 293 bits (750), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 174/407 (42%), Positives = 246/407 (60%), Gaps = 26/407 (6%)
Query: 591 GHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISE 650
G +L+ G GSGK++LAKA+ K E L AH+ V C L ++ I++ L SE
Sbjct: 593 GALLLTGGKGSGKSTLAKAICK--EAFDKLDAHVERVDCKALRGKRLENIQKTLEVAFSE 650
Query: 651 ALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIA--LTKFLVDIMDEYGEKRKSSCGIG 708
A+ PS+V+ D+LD I + PE +V + L L D++ E+ +G
Sbjct: 651 AVWMQPSVVLLDDLDLIAGLPAVPEHEHSPDAVQSQRLAHALNDMIKEF-------ISMG 703
Query: 709 P-IAFVASAQSLEKI-PQSLTSSGRFDFH-VQLPAPAASERKAILEHEIQRRSLEC---- 761
+A +A++QS + + P +++ G F VQ P E++ + + + L+C
Sbjct: 704 SLVALIATSQSQQSLHPLLVSAQGVHIFQCVQHIQPPNQEQRCEILCNVIKNKLDCDINK 763
Query: 762 -SDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFSQAM 820
+D L VA + G+ A D +LVDR +H+ + R S S+ EK + TL DF +A+
Sbjct: 764 FTDLDLQHVAKETGGFVARDFTVLVDRAIHSRLSR--QSISTREKLVLTTL---DFQKAL 818
Query: 821 HEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSN 880
FLP ++R + GWD +GGL +++ + + I+LP+K+P +FA P+R R+
Sbjct: 819 RGFLPASLRSVNLHKPRD--LGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTG 876
Query: 881 VLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCL 940
+LLYGPPG GKT + G A + FISVKGPELL+KYIGASEQAVRDIF +A AA PC+
Sbjct: 877 ILLYGPPGTGKTLLAGVIARESRMNFISVKGPELLSKYIGASEQAVRDIFIRAQAAKPCI 936
Query: 941 LFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAAT 987
LFFDEF+SIAP+RGHDNTGVTDRVVNQ LT+LDGVE L GV+V AAT
Sbjct: 937 LFFDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAAT 983
Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 33/188 (17%)
Query: 13 NCFVSLPLKLIETLESTRSAHLLPQVLSLELRSRSNQRWVVAWSGATSSSSFIE------ 66
+CF+ LP +L+ L HLL NQ V WS + S++E
Sbjct: 26 DCFLHLPRRLVAQL------HLL-----------QNQAIEVVWSHQPAFLSWVEGRHFSD 68
Query: 67 -------VARQFAECISLADHTIVQVRVVSNVLKATLVTIEPLTEDDWEVLELNSEHAEA 119
+ RQ + + L++ V ++ S+V+ V +EPL+ DDWE+LEL++ E
Sbjct: 69 QGENVAEINRQVGQKLGLSNGGQVFLKPCSHVVSCQQVEVEPLSADDWEILELHAVSLEQ 128
Query: 120 AILNQVRIVHEAMRFPLWLHGRTIITFHVVSTFPKKPVVQLVPGTEVAVAPKRRK---NN 176
+L+Q+RIV FP+W+ +T I +V+ P +L T++ + PK R+ N
Sbjct: 129 HLLDQIRIVFPKAIFPVWVDQQTYIFIQIVALIPAASYGRLETDTKLLIQPKTRRAKENT 188
Query: 177 VKKHEDSY 184
K + Y
Sbjct: 189 FSKADAEY 196
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 84/202 (41%), Gaps = 36/202 (17%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII--------RQAL 644
IL++GPPG+GKT LA +A+ + + F+ KGP + QA+
Sbjct: 877 ILLYGPPGTGKTLLAGVIARE--------SRMNFISV------KGPELLSKYIGASEQAV 922
Query: 645 SNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSS 704
+ A P I+ FD +SI P +T V ++++ +
Sbjct: 923 RDIFIRAQAAKPCILFFDEFESIA-----PRRGHDNTGVTD------RVVNQLLTQLDGV 971
Query: 705 CGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDE 764
G+ + +A+ + I +L GR D V P P R IL + SL +D+
Sbjct: 972 EGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEIL--NVLSDSLPLADD 1029
Query: 765 I-LLDVASKCDGYDAYDLEILV 785
+ L VAS D + DL+ L+
Sbjct: 1030 VDLQHVASVTDSFTGADLKALL 1051
>sp|Q5BL07|PEX1_MOUSE Peroxisome biogenesis factor 1 OS=Mus musculus GN=Pex1 PE=1 SV=2
Length = 1284
Score = 278 bits (712), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 170/409 (41%), Positives = 240/409 (58%), Gaps = 30/409 (7%)
Query: 591 GHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISE 650
G +LI G GSGK++ AKA+ K E L A + V C L ++ I++AL SE
Sbjct: 594 GALLITGGKGSGKSTFAKAICK--EAQDTLDARVETVDCKALRGKRLESIQKALEVAFSE 651
Query: 651 ALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIA--LTKFLVDIMDEYGEKRKSSCGIG 708
A PS+++ D+LD I S PE +V + L L D++ E+ S G
Sbjct: 652 AAWRQPSVILLDDLDLIAGLPSVPEQEHSPEAVQSQRLAHALNDMIKEF-----VSTG-S 705
Query: 709 PIAFVASAQSLEKIPQSLTSS-GRFDF----HVQLPAPAASERKAILEHEIQRRSLECSD 763
+A +A++Q + + SL S+ G F H+Q P P E++ + H + + L C
Sbjct: 706 LVALIATSQLQQSLHPSLVSAQGIHTFQCVQHLQPPNP---EQRCEILHSVVKNKLGCDI 762
Query: 764 EILLDVASKC-----DGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFSQ 818
D+ +C + + A D +LVDR +H+++ R S TL DF +
Sbjct: 763 SNFPDLDLQCIAKDTEAFVARDFTVLVDRAIHSSLSRQHSSSRE-----DLTLTTSDFQK 817
Query: 819 AMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLR 878
A+ FLP ++R++ GWD +GGL +++ + + I+LP+K+P +FA P+R R
Sbjct: 818 ALRGFLPASLRNVNLHKPRD--LGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQR 875
Query: 879 SNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAP 938
+ +LLYGPPG GKT + G A + FIS+KGPELL+KYIGASEQAVRD+F +A AA P
Sbjct: 876 TGILLYGPPGTGKTLLAGVVARESGMNFISIKGPELLSKYIGASEQAVRDVFIRAQAAKP 935
Query: 939 CLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAAT 987
C+LFFDEF+SIAP+RGHDNTGVTDRVVNQ LT+LDGVE L GV+V AAT
Sbjct: 936 CILFFDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAAT 984
Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 120/254 (47%), Gaps = 26/254 (10%)
Query: 13 NCFVSLPLKLIETLESTRSAHLLPQVLSLELRSRSNQ---RWVVAWSGATSSSSFIEVAR 69
+CF+ LP +L+ L HLL Q ++E+ S WV S + E+ R
Sbjct: 26 DCFLHLPRRLVAQL------HLL-QNQAIEVASDHQPTYLSWVEGRHFNDQSENVAEINR 78
Query: 70 QFAECISLADHTIVQVRVVSNVLKATLVTIEPLTEDDWEVLELNSEHAEAAILNQVRIVH 129
Q + + L+ V +R S+V+ V +EPL+ DDWE+LEL++ E +L+Q+RIV
Sbjct: 79 QVGQKLGLSSGDQVFLRPCSHVVSCQQVEVEPLSADDWEILELHAISLEQHLLDQIRIVF 138
Query: 130 EAMRFPLWLHGRTIITFHVVSTFPKKPVVQLVPGTEVAVAPKRRK---NNVKKHEDSYMQ 186
P+W+ +T I +V+ P P +L T++ + PK R+ + K D++ Q
Sbjct: 139 PKAVVPIWVDQQTYIFIQIVTLMPAAPYGRLETNTKLLIQPKTRQAKESTFPKEGDAHGQ 198
Query: 187 AFN---ESTSIAKAL--LRVQDSDEGLS----HKCNVKGVELG----VALTSVAFINPET 233
+ E ++K L ++ + EG++ V G L L S+ P++
Sbjct: 199 VHSYGREQKGLSKELQTRQLHTNSEGITASNGRDPKVPGGPLKPSWWAVLGSMLSFGPDS 258
Query: 234 AENVSLCSLELVAI 247
+ + SLEL A
Sbjct: 259 KQESAWGSLELGAF 272
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 92/217 (42%), Gaps = 37/217 (17%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII--------RQAL 644
IL++GPPG+GKT LA VA+ + + F+ KGP + QA+
Sbjct: 878 ILLYGPPGTGKTLLAGVVARE--------SGMNFISI------KGPELLSKYIGASEQAV 923
Query: 645 SNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSS 704
+ A P I+ FD +SI P +T V ++++ +
Sbjct: 924 RDVFIRAQAAKPCILFFDEFESIA-----PRRGHDNTGVTD------RVVNQLLTQLDGV 972
Query: 705 CGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDE 764
G+ + +A+ + I +L GR D V P P R IL + +SL +D+
Sbjct: 973 EGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEIL--TVLSKSLALADD 1030
Query: 765 I-LLDVASKCDGYDAYDLE-ILVDRTVHAAVGRYLHS 799
+ L VAS D + DL+ +L + + A GR L S
Sbjct: 1031 VDLQHVASVTDSFTGADLKALLYNAQLEALQGRLLPS 1067
>sp|Q54GX5|PEX1_DICDI Peroxisome biogenesis factor 1 OS=Dictyostelium discoideum GN=pex1
PE=3 SV=1
Length = 1227
Score = 276 bits (707), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 166/425 (39%), Positives = 243/425 (57%), Gaps = 34/425 (8%)
Query: 586 HLPLPG--HILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQA 643
L PG ++I G GSGK+ LA ++ A I+ + C++L K IR+
Sbjct: 596 QLNTPGVNGMIIAGSHGSGKSLLATSLGGYYSTDSRSNAFIIKLDCNQLKELKVENIRKQ 655
Query: 644 LSNFISEALDHAPS---------------IVIFDNLDSIISSSSDPEGSQPSTSVIALTK 688
+ ++ + + I+I ++LD I+ + +D Q S I +
Sbjct: 656 FNKLFYKSCKESGNTLSATTSTNTTPPPIIIILESLDLILGTPND----QDPGSKIRCEQ 711
Query: 689 FLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKA 748
+ I + + S I IA V S+QSL QS+ F ++L AP ER
Sbjct: 712 LVSHIKSLCFKYQNRSSPIVMIATVISSQSL---CQSIQIPELFGLTIELQAPTREERVE 768
Query: 749 ILEHEIQRRSLECSDEI---LLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEK 805
ILE ++ + + D+ L+ ++ +GY D+E +VDR++H + + + ++++
Sbjct: 769 ILERYLKYQGKQLKDQQSLNLMKFSASMEGYLGCDVEQIVDRSIHLSSIKEIENNNNNND 828
Query: 806 HIKPTLVRDDFS---QAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIEL 862
+ + FS +A + P+ ++ I S+E W D+GGL ++ +KE IE
Sbjct: 829 DNDDDNIIE-FSIIEKAKEGYTPITLKGIKLHSSE---IKWQDIGGLDSVRAMLKETIEW 884
Query: 863 PSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGAS 922
P+K+P +F +PLRLRS +LLYGP GCGKT + A A C L FISVKGPELLNKYIG+S
Sbjct: 885 PTKYPKLFQSSPLRLRSGILLYGPTGCGKTLLASAIAGECGLNFISVKGPELLNKYIGSS 944
Query: 923 EQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVF 982
EQ VRD+FS+A++A PC+LFFDEFDSIAP+RGHDN+GVTDRVVNQFLT+LDGVE LTGV+
Sbjct: 945 EQGVRDVFSRASSAKPCVLFFDEFDSIAPRRGHDNSGVTDRVVNQFLTQLDGVEGLTGVY 1004
Query: 983 VFAAT 987
V AAT
Sbjct: 1005 VLAAT 1009
Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 106/183 (57%), Gaps = 12/183 (6%)
Query: 1 MELEVRVVGGVENCFVSLPLKLIETL------ESTRSAHLLPQVLSLELRSRSNQRWVVA 54
MEL V++ + CFVSLP K++ +L +S L ++ + ++ + V
Sbjct: 1 MELHVQLKHSTD-CFVSLPPKIVHSLLLLSEKQSKSLGTLGLEITWYDKINKKENKGYVG 59
Query: 55 WSGATSSSSF---IEVARQFAECIS-LADHTIVQVRVVSNVLKATLVTIEPLTEDDWEVL 110
W+G ++ F IE++++ A+C+ + + ++++ ++N+ A V +EPLT DDWE++
Sbjct: 60 WAGGSTDPRFTDSIEMSQEMAQCLGGIKNEQKLKLKALNNIELAHSVQVEPLTSDDWEIM 119
Query: 111 ELNSEHAEAAILNQVRIVHEAMRFPLWLHGRTIITFHVVSTFPKKPVVQLVPGTEVAVAP 170
E++ ++ E +LNQV I++ P+W+H +TII V T P PVV+L +E+ VAP
Sbjct: 120 EVHQQYLEEQLLNQVNILYSGQIVPIWIHHKTIIKLKVTETLP-TPVVKLSSNSEIIVAP 178
Query: 171 KRR 173
K R
Sbjct: 179 KPR 181
Score = 38.1 bits (87), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 67/177 (37%), Gaps = 33/177 (18%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII- 640
F + L L IL++GP G GKT LA A+A C KGP +
Sbjct: 892 FQSSPLRLRSGILLYGPTGCGKTLLASAIAGE--------------CGLNFISVKGPELL 937
Query: 641 -------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDI 693
Q + + S A P ++ FD DSI P ++ V +
Sbjct: 938 NKYIGSSEQGVRDVFSRASSAKPCVLFFDEFDSIA-----PRRGHDNSGVTD------RV 986
Query: 694 MDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAIL 750
++++ + G+ + +A+ + I +L GR D + P +ER IL
Sbjct: 987 VNQFLTQLDGVEGLTGVYVLAATSRPDLIDPALLRPGRLDKSLYCNIPEFNERLDIL 1043
>sp|P46463|PEX1_PICPA Peroxisome biosynthesis protein PAS1 OS=Komagataella pastoris
GN=PEX1 PE=3 SV=1
Length = 1157
Score = 271 bits (694), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 160/442 (36%), Positives = 239/442 (54%), Gaps = 61/442 (13%)
Query: 591 GHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISE 650
G L+ G GSGK+ + VA+ + + V + C ++ E +R + SE
Sbjct: 517 GGSLLFGTSGSGKSLVISQVAQIVTNKGHFVK---LLNCDKIMSESYNNLRGIFEDIFSE 573
Query: 651 ALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGPI 710
APS++I ++LDS+I + + S S L+++ + + R I
Sbjct: 574 VSWKAPSLLILEDLDSLIPAEQEHSDSSQSRQ---LSEYFISKLSAQTINRD-------I 623
Query: 711 AFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSD-EILLDV 769
+AS++S E + + ++ + QL AP RK IL+ + ++ CS+ E+L ++
Sbjct: 624 TILASSKSKESLNSLIFTTHLIEHDFQLRAPDKEARKQILQSYLDTLNVFCSEGELLNNI 683
Query: 770 ASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIK--------------------- 808
A + +GY DL++L DR H + R + +DS E I+
Sbjct: 684 AVETEGYLPKDLKVLCDRAYHDLISRDILADSDSELDIEESSTPILNGSVGDIANKQSEI 743
Query: 809 -----------------------PTLVRDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDD 845
T+ +D+F A+ ++P ++R + ++ WDD
Sbjct: 744 ENGISGLELTNNSSSTIAVDKHGATIQKDNFDSALSGYIPQSLRGVKLQKSD---VRWDD 800
Query: 846 VGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLR 905
+GGL D ++ + E +E P+K+ IF+ PLRLRS +LLYG PGCGKT + A AA C L
Sbjct: 801 IGGLRDAKSILLETLEWPTKYAPIFSSCPLRLRSGILLYGYPGCGKTLLASAVAAQCGLN 860
Query: 906 FISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVV 965
FIS+KGPE+LNKYIG SEQ+VR++F +A AA PC+LFFDEFDSIAPKRGHD+TGVTDRVV
Sbjct: 861 FISIKGPEILNKYIGPSEQSVRELFERAQAAKPCILFFDEFDSIAPKRGHDSTGVTDRVV 920
Query: 966 NQFLTELDGVEVLTGVFVFAAT 987
NQ LT++DG E L GV+V AAT
Sbjct: 921 NQMLTQMDGAEGLDGVYVLAAT 942
Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 72/141 (51%), Gaps = 17/141 (12%)
Query: 46 RSNQRWVV--AWSGA----TSSSSFIEVARQFAECISLADHTIVQVRVVSNVLKATLVTI 99
R+ QR + W+G +SS+ IE+ R A I L ++ V V V + +KA V +
Sbjct: 49 RAAQRRIAYCGWAGGITKTSSSNPVIEIDRSLASAIDLQENVNVTVNVHIDAVKAITVEL 108
Query: 100 EPLTEDDWEVLELNSEHAEAAILNQVRIVHEAMRFPLWLHGRTIITFHV------VSTFP 153
EP+T +DWE++E +++ E +LNQ R V+ ++ +T V VSTF
Sbjct: 109 EPVTSNDWEIVETHAQVLETYLLNQTRCVYPNQVLVVYPTPQTTARLLVKKIEPEVSTF- 167
Query: 154 KKPVVQLVPGTEVAVAPKRRK 174
QL TEV +APK +K
Sbjct: 168 ----AQLFNDTEVQIAPKVQK 184
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 89/231 (38%), Gaps = 36/231 (15%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII- 640
FS+ L L IL++G PG GKT LA AVA C KGP I
Sbjct: 825 FSSCPLRLRSGILLYGYPGCGKTLLASAVAAQ--------------CGLNFISIKGPEIL 870
Query: 641 -------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDI 693
Q++ A P I+ FD DSI P+ ST V +
Sbjct: 871 NKYIGPSEQSVRELFERAQAAKPCILFFDEFDSIA-----PKRGHDSTGVTD------RV 919
Query: 694 MDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHE 753
+++ + + G+ + +A+ + I +L GR D V P +R IL+
Sbjct: 920 VNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPDFDDRLDILQSV 979
Query: 754 IQRRSLECSDEI-LLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSF 803
R++ S + L VA +C G+ DL+ L AV L D S
Sbjct: 980 T--RNMNVSKSVNLSSVAGECSGFSGADLQALAYNAYLKAVHEKLTKDESM 1028
Score = 42.7 bits (99), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 67/130 (51%), Gaps = 11/130 (8%)
Query: 882 LLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLN--KYIGASEQAVR----DIFSKATA 935
LL+G G GK+ ++ A + + VK LLN K + S +R DIFS+ +
Sbjct: 520 LLFGTSGSGKSLVISQVAQIVTNKGHFVK---LLNCDKIMSESYNNLRGIFEDIFSEVSW 576
Query: 936 AAPCLLFFDEFDSIAP-KRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATRLEFFHY 994
AP LL ++ DS+ P ++ H ++ + ++ F+++L + + + A+++ +
Sbjct: 577 KAPSLLILEDLDSLIPAEQEHSDSSQSRQLSEYFISKLSAQTINRDITILASSKSK-ESL 635
Query: 995 NVLLFCSFII 1004
N L+F + +I
Sbjct: 636 NSLIFTTHLI 645
>sp|P24004|PEX1_YEAST Peroxisomal ATPase PEX1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PEX1 PE=1 SV=2
Length = 1043
Score = 239 bits (610), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 144/410 (35%), Positives = 219/410 (53%), Gaps = 41/410 (10%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRL----SLEKGPIIRQALSNFI 648
I++ G G GKT L K + +E KD + + C L +L+K ++ + +
Sbjct: 457 IILDGKQGIGKTRLLKELINEVE--KDHHIFVKYADCETLHETSNLDK---TQKLIMEWC 511
Query: 649 SEALDHAPSIVIFDNLDSII----SSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSS 704
S + PS+++ DN++++ ++ DP + + L F ++ + + K
Sbjct: 512 SFCYWYGPSLIVLDNVEALFGKPQANDGDPSNNGQWDNASKLLNFFINQVTKIFNKDNKR 571
Query: 705 CGIGPIAFVASAQSLEKIPQSLTSSGRFDFHV-----QLPAPAASERKAILEHEIQRRSL 759
I + S + +I L FD H L AP R +LE+ + +
Sbjct: 572 -----IRVLFSGKQKTQINPLL-----FDKHFVSETWSLRAPDKHARAKLLEYFFSKNQI 621
Query: 760 E--CSDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFS 817
D D++ + +G+ DLEI ++ + D E+ + R+ FS
Sbjct: 622 MKLNRDLQFSDLSLETEGFSPLDLEIFTEKIFY---------DLQLERDCDNVVTRELFS 672
Query: 818 QAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRL 877
+++ F P A+R + T + W D+G L + ++ + E +E P+K+ IF PLRL
Sbjct: 673 KSLSAFTPSALRGVKLTKETNIK--WGDIGALANAKDVLLETLEWPTKYEPIFVNCPLRL 730
Query: 878 RSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAA 937
RS +LLYG PGCGKT + A A C L FISVKGPE+LNK+IGASEQ +R++F +A +
Sbjct: 731 RSGILLYGYPGCGKTLLASAVAQQCGLNFISVKGPEILNKFIGASEQNIRELFERAQSVK 790
Query: 938 PCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAAT 987
PC+LFFDEFDSIAPKRGHD+TGVTDRVVNQ LT++DG E L GV++ AAT
Sbjct: 791 PCILFFDEFDSIAPKRGHDSTGVTDRVVNQLLTQMDGAEGLDGVYILAAT 840
Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 79/187 (42%), Gaps = 12/187 (6%)
Query: 3 LEVRVVGGVENCFVSLPLKLIETLESTRSAHLLPQVLSLELRSRSNQRWVV--AWSGATS 60
L ++ + F+ LP +I LEST A Q + + S ++ +V W G S
Sbjct: 12 LRIQFSNAIVGNFLRLPHSIINVLESTNYA---IQEFGIAVHSHNSDIPIVHLGWDGHDS 68
Query: 61 SSS--FIEVARQFAECISLADHTIV---QVRVVSNVLKATLVTIEPLTEDDWEVLELNS- 114
SS + + A L + + ++ + AT V + P T DDWE+++ N+
Sbjct: 69 GSSENVVLINPVLATVYDLNQKSPLVDLYIQRYDHTHLATEVYVTPETSDDWEIIDANAM 128
Query: 115 EHAEAAILNQVRIVHEAMRFPLWLHGRTIITFHVVSTFPKKPVVQLVPGTEVAVAPKRRK 174
IL+Q RIV +L G + F + P ++ G+ V VAPK K
Sbjct: 129 RFQNGEILHQTRIVTPGETLICYLEG-IVTKFKIDRVEPSMKSARITDGSLVVVAPKVNK 187
Query: 175 NNVKKHE 181
+ K E
Sbjct: 188 TRLVKAE 194
Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 90/233 (38%), Gaps = 43/233 (18%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII- 640
F L L IL++G PG GKT LA AVA+ C KGP I
Sbjct: 723 FVNCPLRLRSGILLYGYPGCGKTLLASAVAQQ--------------CGLNFISVKGPEIL 768
Query: 641 -------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDI 693
Q + A P I+ FD DSI P+ ST V +
Sbjct: 769 NKFIGASEQNIRELFERAQSVKPCILFFDEFDSIA-----PKRGHDSTGVTD------RV 817
Query: 694 MDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHE 753
+++ + + G+ + +A+ + I +L GR D V P SER IL+
Sbjct: 818 VNQLLTQMDGAEGLDGVYILAATSRPDLIDSALLRPGRLDKSVICNIPTESERLDILQAI 877
Query: 754 IQRR---------SLECSDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYL 797
+ + +LE + ++ L +A K G+ DL+ L +V R+L
Sbjct: 878 VNSKDKDTGQKKFALEKNADLKL-IAEKTAGFSGADLQGLCYNAYLKSVHRWL 929
>sp|O05209|VAT_THEAC VCP-like ATPase OS=Thermoplasma acidophilum (strain ATCC 25905 /
DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) GN=vat
PE=1 SV=1
Length = 745
Score = 238 bits (607), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 149/424 (35%), Positives = 219/424 (51%), Gaps = 46/424 (10%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII- 640
F + P ++++GPPG+GKT +A+AVA + F+ + GP I
Sbjct: 216 FERLGITPPKGVILYGPPGTGKTLIARAVANE--------SGANFLSIN------GPEIM 261
Query: 641 -------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDI 693
Q L S+A + APSI+ D +DSI + +G + V+A L+D
Sbjct: 262 SKYYGQSEQKLREIFSKAEETAPSIIFIDEIDSIAPKREEVQG-EVERRVVAQLLTLMDG 320
Query: 694 MDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHE 753
M E G + + + ++ I +L GRFD +++ P + RK IL
Sbjct: 321 MKERGH----------VIVIGATNRIDAIDPALRRPGRFDREIEIGVPDRNGRKEILMIH 370
Query: 754 IQRRSLECSDE----ILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHS---DSSFEKH 806
+ L S+E L ++A G+ DL LV + A+ RYL D
Sbjct: 371 TRNMPLGMSEEEKNKFLEEMADYTYGFVGADLAALVRESAMNALRRYLPEIDLDKPIPTE 430
Query: 807 I--KPTLVRDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPS 864
I K + DDF A+ P ++R++ E WDD+GGL D++ IKE +ELP
Sbjct: 431 ILEKMVVTEDDFKNALKSIEPSSLREVM---VEVPNVHWDDIGGLEDVKREIKETVELPL 487
Query: 865 KFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQ 924
P++F + +R LLYGPPG GKT + A A + FIS+KGPE+L+K++G SE+
Sbjct: 488 LKPDVFKRLGIRPSKGFLLYGPPGVGKTLLAKAVATESNANFISIKGPEVLSKWVGESEK 547
Query: 925 AVRDIFSKATAAAPCLLFFDEFDSIAPKRG-HDNTGVTDRVVNQFLTELDGVEVLTGVFV 983
A+R+IF KA AP ++F DE DSIAP+RG ++GVT+R+VNQ LT LDG+EV+ GV V
Sbjct: 548 AIREIFKKAKQVAPAIVFLDEIDSIAPRRGTTSDSGVTERIVNQLLTSLDGIEVMNGVVV 607
Query: 984 FAAT 987
AT
Sbjct: 608 IGAT 611
Score = 140 bits (354), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 71/151 (47%), Positives = 93/151 (61%)
Query: 837 EGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVG 896
E R ++D+GGL++ I+EMIELP K P +F + + V+LYGPPG GKT I
Sbjct: 183 EVSRISYEDIGGLSEQLGKIREMIELPLKHPELFERLGITPPKGVILYGPPGTGKTLIAR 242
Query: 897 AAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHD 956
A A F+S+ GPE+++KY G SEQ +R+IFSKA AP ++F DE DSIAPKR
Sbjct: 243 AVANESGANFLSINGPEIMSKYYGQSEQKLREIFSKAEETAPSIIFIDEIDSIAPKREEV 302
Query: 957 NTGVTDRVVNQFLTELDGVEVLTGVFVFAAT 987
V RVV Q LT +DG++ V V AT
Sbjct: 303 QGEVERRVVAQLLTLMDGMKERGHVIVIGAT 333
Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 94/220 (42%), Gaps = 36/220 (16%)
Query: 573 LLSPDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRL 632
LL PD F + L++GPPG GKT LAKAVA ++ F+
Sbjct: 487 LLKPD---VFKRLGIRPSKGFLLYGPPGVGKTLLAKAVATE--------SNANFISI--- 532
Query: 633 SLEKGPII--------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVI 684
KGP + +A+ +A AP+IV D +DSI +TS
Sbjct: 533 ---KGPEVLSKWVGESEKAIREIFKKAKQVAPAIVFLDEIDSIAPRRG-------TTSDS 582
Query: 685 ALTKFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAAS 744
+T+ +V+ + + + G+ + + + + +L +GRFD + +P P
Sbjct: 583 GVTERIVNQLLTSLDGIEVMNGV---VVIGATNRPDIMDPALLRAGRFDKLIYIPPPDKE 639
Query: 745 ERKAILEHEIQRRSLECSDEILLDVASKCDGYDAYDLEIL 784
R +IL+ + L D L D+A + +GY DLE L
Sbjct: 640 ARLSILKVHTKNMPL-APDVDLNDIAQRTEGYVGADLENL 678
>sp|Q9HPF0|CDCH_HALSA Protein CdcH OS=Halobacterium salinarum (strain ATCC 700922 / JCM
11081 / NRC-1) GN=cdcH PE=3 SV=1
Length = 742
Score = 237 bits (605), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 153/421 (36%), Positives = 217/421 (51%), Gaps = 44/421 (10%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII- 640
F + P +L+HGPPG+GKT LAKAVA S S+ II
Sbjct: 215 FQKLGIEPPQGVLLHGPPGTGKTLLAKAVANE-------------TSASFFSIAGPEIIS 261
Query: 641 ------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIM 694
Q L +A D +PSI+ D LDSI D G + V+A ++D +
Sbjct: 262 KYYGESEQQLREIFEDAKDDSPSIIFIDELDSIAPKREDVTG-EVERRVVAQLLTMMDGL 320
Query: 695 DEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEI 754
+ G G + +A+ ++ + +L GRFD +++ P R+ IL+ I
Sbjct: 321 E----------GRGQVIVIAATNRVDAVDPALRRPGRFDREIEIGVPDEIGREEILK--I 368
Query: 755 QRRSLECSDEI-LLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLV- 812
R + SD++ L +A G+ D+E L A+ RYL E+ I P+L+
Sbjct: 369 HTRGMPLSDDVNLSTLADDTHGFVGADIESLSKEAAMRALRRYLPEIDLDEEDIPPSLID 428
Query: 813 -----RDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFP 867
R+DF A+ E P AMR++ E + WDDVGGLT+ +N +KE +E P P
Sbjct: 429 RMIVKREDFKGALSEVEPSAMREVL---VELPKITWDDVGGLTEAKNNVKESVEWPLNQP 485
Query: 868 NIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVR 927
F + + + VLLYGPPG GKT + A A + FISV+GP+LL+K++G SE+A+R
Sbjct: 486 EKFTRMGVEPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIR 545
Query: 928 DIFSKATAAAPCLLFFDEFDSIAPKRGH-DNTGVTDRVVNQFLTELDGVEVLTGVFVFAA 986
F KA AP ++FFDE DS+AP RG V++RVVNQ LTELDG+E + V V AA
Sbjct: 546 QTFRKARQVAPTVIFFDELDSLAPGRGQTGGNNVSERVVNQLLTELDGLEEMEEVMVIAA 605
Query: 987 T 987
T
Sbjct: 606 T 606
Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 94/151 (62%), Gaps = 2/151 (1%)
Query: 838 GGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGA 897
GG ++D+GGL + ++EM+ELP K P IF + + VLL+GPPG GKT + A
Sbjct: 183 GGGITYEDIGGLENEIQRVREMVELPMKHPQIFQKLGIEPPQGVLLHGPPGTGKTLLAKA 242
Query: 898 AAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDN 957
A S F S+ GPE+++KY G SEQ +R+IF A +P ++F DE DSIAPKR D
Sbjct: 243 VANETSASFFSIAGPEIISKYYGESEQQLREIFEDAKDDSPSIIFIDELDSIAPKR-EDV 301
Query: 958 TG-VTDRVVNQFLTELDGVEVLTGVFVFAAT 987
TG V RVV Q LT +DG+E V V AAT
Sbjct: 302 TGEVERRVVAQLLTMMDGLEGRGQVIVIAAT 332
>sp|O28972|Y1297_ARCFU Cell division cycle protein 48 homolog AF_1297 OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=AF_1297 PE=3 SV=1
Length = 733
Score = 232 bits (591), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 148/422 (35%), Positives = 222/422 (52%), Gaps = 46/422 (10%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII- 640
F + P +L++GPPG+GKT +AKAVA ++ H F+ S GP I
Sbjct: 208 FQRLGIEPPKGVLLYGPPGTGKTLIAKAVANEVDAH--------FIPIS------GPEIM 253
Query: 641 -------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDI 693
Q L EA ++APSI+ D +DSI + G + V+A L+D
Sbjct: 254 SKYYGESEQRLREIFEEAKENAPSIIFIDEIDSIAPKREEVTG-EVERRVVAQLLALMDG 312
Query: 694 MDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHE 753
++ G+ + +A+ + I +L GRFD +++ P RK ILE
Sbjct: 313 LEARGD----------VIVIAATNRPDAIDPALRRPGRFDREIEIGVPDKEGRKEILE-- 360
Query: 754 IQRRSLECSDEI-LLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLV 812
I R + ++++ L ++A +G+ DLE L A+ R L + I ++
Sbjct: 361 IHTRKMPLAEDVDLEELAELTNGFVGADLEALCKEAAMHALRRVLPEIDIEAEEIPAEVI 420
Query: 813 ------RDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKF 866
R+DF +A+ P AMR++ E W+D+GGL + + E +E P K+
Sbjct: 421 ENLKVTREDFMEALKNIEPSAMREVL---VEVPNVKWEDIGGLEHAKQELMEAVEWPLKY 477
Query: 867 PNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAV 926
P +F A ++ +LL+GPPG GKT + A A + FISVKGPELL+K++G SE+ V
Sbjct: 478 PEVFRAANIKPPRGILLFGPPGTGKTLLAKAVANESNANFISVKGPELLSKWVGESEKHV 537
Query: 927 RDIFSKATAAAPCLLFFDEFDSIAPKRGH-DNTGVTDRVVNQFLTELDGVEVLTGVFVFA 985
R++F KA APC++FFDE DS+AP+RG ++ VT+RVV+Q LTELDG+E L V V A
Sbjct: 538 REMFRKARQVAPCVIFFDEIDSLAPRRGGIGDSHVTERVVSQLLTELDGLEELKDVVVIA 597
Query: 986 AT 987
AT
Sbjct: 598 AT 599
Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 87/145 (60%)
Query: 843 WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 902
++D+GGL ++EMIELP K P +F + + VLLYGPPG GKT I A A
Sbjct: 181 YEDIGGLKRELRLVREMIELPLKHPELFQRLGIEPPKGVLLYGPPGTGKTLIAKAVANEV 240
Query: 903 SLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD 962
FI + GPE+++KY G SEQ +R+IF +A AP ++F DE DSIAPKR V
Sbjct: 241 DAHFIPISGPEIMSKYYGESEQRLREIFEEAKENAPSIIFIDEIDSIAPKREEVTGEVER 300
Query: 963 RVVNQFLTELDGVEVLTGVFVFAAT 987
RVV Q L +DG+E V V AAT
Sbjct: 301 RVVAQLLALMDGLEARGDVIVIAAT 325
Score = 63.9 bits (154), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 107/250 (42%), Gaps = 51/250 (20%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F ++ P IL+ GPPG+GKT LAKAVA ++ F+ KGP
Sbjct: 481 FRAANIKPPRGILLFGPPGTGKTLLAKAVANE--------SNANFISV------KGP--- 523
Query: 642 QALSNFISEALDH-----------APSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFL 690
+ LS ++ E+ H AP ++ FD +DS+ S + V++
Sbjct: 524 ELLSKWVGESEKHVREMFRKARQVAPCVIFFDEIDSLAPRRGGIGDSHVTERVVSQLLTE 583
Query: 691 VDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAIL 750
+D ++E + + +A+ + I +L GR + H+ +P P R I
Sbjct: 584 LDGLEELKD----------VVVIAATNRPDMIDPALLRPGRLERHIYIPPPDKKARVEIF 633
Query: 751 EHEIQRRSLECSDEI-LLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKP 809
+I R +D++ + ++A K +GY D+E + A+ R L IKP
Sbjct: 634 --KIHLRGKPLADDVNIEELAEKTEGYSGADIEAVCREAGMLAI-REL---------IKP 681
Query: 810 TLVRDDFSQA 819
+ R++ +A
Sbjct: 682 GMTREEAKEA 691
>sp|P32794|AFG2_YEAST ATPase family gene 2 protein OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=AFG2 PE=1 SV=1
Length = 780
Score = 231 bits (590), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 145/414 (35%), Positives = 219/414 (52%), Gaps = 31/414 (7%)
Query: 581 WFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII 640
FS++ + P IL+HGPPG+GKT L + VA + AH++ + + +
Sbjct: 270 LFSSFGVSPPRGILLHGPPGTGKTMLLRVVANTSN------AHVLTINGPSIVSKYLGET 323
Query: 641 RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEK 700
AL + +EA + PSI+ D +DSI + ++ + + + V+A L+ +MD G
Sbjct: 324 EAALRDIFNEARKYQPSIIFIDEIDSIAPNRANDDSGEVESRVVAT---LLTLMDGMG-- 378
Query: 701 RKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLE 760
G + +A+ + +L GRFD V++ P R IL + R S
Sbjct: 379 -----AAGKVVVIAATNRPNSVDPALRRPGRFDQEVEIGIPDVDARFDILTKQFSRMS-- 431
Query: 761 CSDEILLD------VASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEK-HIKPTLVR 813
SD +LD +ASK GY DL L +V + R L +D++ +K +K TL
Sbjct: 432 -SDRHVLDSEAIKYIASKTHGYVGADLTALCRESVMKTIQRGLGTDANIDKFSLKVTL-- 488
Query: 814 DDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQA 873
D AM + P AMR+I E + W D+GG +++ +KEMI+LP + FA+
Sbjct: 489 KDVESAMVDIRPSAMREIF---LEMPKVYWSDIGGQEELKTKMKEMIQLPLEASETFARL 545
Query: 874 PLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKA 933
+ VLLYGPPGC KT A A + F++VKGPE+ NKY+G SE+A+R+IF KA
Sbjct: 546 GISAPKGVLLYGPPGCSKTLTAKALATESGINFLAVKGPEIFNKYVGESERAIREIFRKA 605
Query: 934 TAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAAT 987
+AAP ++FFDE D+++P R +T + V+ L E+DGVE L GV + AAT
Sbjct: 606 RSAAPSIIFFDEIDALSPDRDGSSTSAANHVLTSLLNEIDGVEELKGVVIVAAT 659
Score = 63.2 bits (152), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 33/220 (15%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII- 640
F+ + P +L++GPPG KT AKA+A + I F+ KGP I
Sbjct: 542 FARLGISAPKGVLLYGPPGCSKTLTAKALATE--------SGINFLAV------KGPEIF 587
Query: 641 -------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDI 693
+A+ +A APSI+ FD +D++ S D +GS S + LT L +I
Sbjct: 588 NKYVGESERAIREIFRKARSAAPSIIFFDEIDAL---SPDRDGSSTSAANHVLTSLLNEI 644
Query: 694 MDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHE 753
D E + + VA+ ++I +L GR D H+ + P + R IL+
Sbjct: 645 -DGVEELKG-------VVIVAATNRPDEIDAALLRPGRLDRHIYVGPPDVNARLEILKKC 696
Query: 754 IQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVHAAV 793
++ + E S L ++A + +GY ++ +L AA+
Sbjct: 697 TKKFNTEESGVDLHELADRTEGYSGAEVVLLCQEAGLAAI 736
>sp|Q3UMC0|SPAT5_MOUSE Spermatogenesis-associated protein 5 OS=Mus musculus GN=Spata5 PE=2
SV=2
Length = 893
Score = 231 bits (589), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 146/413 (35%), Positives = 220/413 (53%), Gaps = 26/413 (6%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F +Y +P P +L++GPPG+GKT +A+AVA + + ++ + S+ E +R
Sbjct: 379 FKSYGIPAPRGLLLYGPPGTGKTMIARAVANEVGAYVSVINGPEII--SKFYGETEARLR 436
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
Q +EA PSI+ D LD++ EG+Q + L +MD G
Sbjct: 437 Q----IFAEATLRHPSIIFIDELDALCPKR---EGAQSEVEKRVVASLLT-LMDGIG--- 485
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
S G + + + + + +L GRFD +++ P A +R IL+ ++R
Sbjct: 486 -SEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPNAQDRLDILQKLLRRVPHLL 544
Query: 762 SDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHS-----DSSFEKHIKPTLVRDDF 816
+ LL +A+ GY DL+ L + A+ R L DS +K TL +DF
Sbjct: 545 TKAELLRLANNAHGYVGADLKALCNEAGLHALRRVLRKQPNLPDSKVAGMVKITL--NDF 602
Query: 817 SQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLR 876
Q M++ P AMR++ + + W D+GGL +I+ +K+ +E P K P F + ++
Sbjct: 603 LQGMNDIRPSAMREV---AIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPKSFNRMGIQ 659
Query: 877 LRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAA 936
VLLYGPPGC KT I A A L F+++KGPEL+NKY+G SE+AVR+IF KA A
Sbjct: 660 PPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAV 719
Query: 937 APCLLFFDEFDSIAPKRGHDNTG--VTDRVVNQFLTELDGVEVLTGVFVFAAT 987
AP ++FFDE D++A +RG + V DRV+ Q LTE+DG+E L V V AAT
Sbjct: 720 APSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTVLAAT 772
Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 77/133 (57%)
Query: 843 WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 902
+D +GGL AI+E+IELP K P +F + +LLYGPPG GKT I A A
Sbjct: 352 YDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVANEV 411
Query: 903 SLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD 962
+ GPE+++K+ G +E +R IF++AT P ++F DE D++ PKR + V
Sbjct: 412 GAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQSEVEK 471
Query: 963 RVVNQFLTELDGV 975
RVV LT +DG+
Sbjct: 472 RVVASLLTLMDGI 484
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 111/253 (43%), Gaps = 43/253 (16%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII- 640
F+ + P +L++GPPG KT +AKA+A + + F+ KGP +
Sbjct: 653 FNRMGIQPPKGVLLYGPPGCSKTMIAKALANE--------SGLNFLAI------KGPELM 698
Query: 641 -------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDI 693
+A+ +A APSI+ FD LD++ G+ + L + L +
Sbjct: 699 NKYVGESERAVREIFRKARAVAPSIIFFDELDALAVERGSSSGAGNVADRV-LAQLLTE- 756
Query: 694 MDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHE 753
MD E+ K+ + +A+ ++I ++L GR D + +P P A+ R+ IL
Sbjct: 757 MDGI-EQLKN------VTVLAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREIL--N 807
Query: 754 IQRRSLECSDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLV 812
+Q S+ S+E+ LD + + D Y ++ + A+ + +D ++H
Sbjct: 808 LQFHSMPISNEVDLDELVLQTDTYSGAEIIAVCKEAALLALEENIKADCIMKRH------ 861
Query: 813 RDDFSQAMHEFLP 825
F+QA+ P
Sbjct: 862 ---FTQALSIVTP 871
>sp|O74941|PEX1_SCHPO Peroxisomal ATPase pex1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=pex1 PE=3 SV=1
Length = 937
Score = 228 bits (582), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 135/396 (34%), Positives = 216/396 (54%), Gaps = 20/396 (5%)
Query: 592 HILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEA 651
+I I+GP G GK++L ++ + + + + V CS + + +N +A
Sbjct: 374 NIYINGPKGCGKSNLVHSLFDY--YSLNSIYFQMIVSCSEIDRSSFAKFQSFWNNVFIQA 431
Query: 652 LDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGPIA 711
+ PSI+ D++ +ISSS+ E + FL + KRK I
Sbjct: 432 ERYEPSIIYLDDVHCLISSSN--ENGELGFVEEREIAFLQHQIINLKRKRK-------II 482
Query: 712 FVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDVAS 771
F+ + ++L F + LP+ A + RK IL Q + + + + ++
Sbjct: 483 FIGFGEEFLTFSENLVLPLLFQIKIALPSLAVTRRKEILTTIFQENFSDITMDSIEFISV 542
Query: 772 KCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFSQAMHEFLPVAMRDI 831
K +GY DL + V R + A ++ + KH+ + + + + +F+P+ +R
Sbjct: 543 KTEGYLMTDLVLFVKRLLSEA---FVEKIQNGPKHL---MNKGLIEKTLKDFVPLQLR-- 594
Query: 832 TKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGK 891
K W D+ G+ + + A++++IE P K+ I+ Q LRL + +LL+G PGCGK
Sbjct: 595 -KAKFVKSSIRWIDIAGMQEAKEAVRDIIESPVKYSLIYKQCRLRLPTGILLFGYPGCGK 653
Query: 892 THIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAP 951
T++ A ++ ++FIS+KGPELL+KYIG SEQ VRD+FS+A A PC+LFFDEFDS+AP
Sbjct: 654 TYLASAISSTFPVQFISIKGPELLDKYIGKSEQGVRDLFSRAQMAKPCVLFFDEFDSVAP 713
Query: 952 KRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAAT 987
+RG D+TGVTDRVVNQ LT++DG E L GV++ AAT
Sbjct: 714 RRGQDSTGVTDRVVNQILTQMDGAESLDGVYIVAAT 749
Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 83/173 (47%), Gaps = 5/173 (2%)
Query: 10 GVENCFVSLPLKLIETLESTRSAHLLPQVLSLELRSRSNQRWVVAWSGATSSSSFIEVAR 69
+ +C V++P L+E++ + + V+ ++ + + SG S SF E+
Sbjct: 9 SLRSCLVNVPELLLESISEPVQNYAVQAVVC---KNDIKKTFYFGISGIPSQFSF-EIDS 64
Query: 70 QFAECISLADHTIVQVRVVSNVLKATLVTIEPLTEDDWEVLELNSEHAEAAILNQVRIVH 129
+A + LA++ + + ++ + + IEP+T +DWE+ E N+ E +L Q R V
Sbjct: 65 TYAHTLKLAENQEINLSIIDCTHEIEQLEIEPVTSNDWEIAERNAAWLEENLLVQYR-VA 123
Query: 130 EAMRFPLWLHGRTIITFHVVSTFPKKPVVQLVPGTEVAVAPKRRKNNVKKHED 182
RF ++L T I F + P +L+ TEV + PK + ++ E+
Sbjct: 124 TTERFIIYLPSGTFIQFQPLKLIPSSLCGRLLRTTEVLITPKPNTSAIEVKEN 176
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 86/215 (40%), Gaps = 34/215 (15%)
Query: 579 GLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGP 638
L + L LP IL+ G PG GKT LA A++ + + F+ KGP
Sbjct: 629 SLIYKQCRLRLPTGILLFGYPGCGKTYLASAISSTFP--------VQFISI------KGP 674
Query: 639 II--------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFL 690
+ Q + + S A P ++ FD DS+ P Q ST V
Sbjct: 675 ELLDKYIGKSEQGVRDLFSRAQMAKPCVLFFDEFDSVA-----PRRGQDSTGVTD----- 724
Query: 691 VDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAIL 750
++++ + + + + VA+ + I +L GR D + P ER +L
Sbjct: 725 -RVVNQILTQMDGAESLDGVYIVAATTRPDMIDPALLRPGRLDKLIFCDLPNEEERLEVL 783
Query: 751 EHEIQRRSLECSDEILLDVASKCDGYDAYDLEILV 785
+ R +E + +L +++ DGY DL L+
Sbjct: 784 QKLANRFHIE-NAAMLKKLSTLTDGYTYADLSSLL 817
Score = 34.3 bits (77), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Query: 866 FPNIFAQA--PLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFIS----VKGPELLNKYI 919
FP+ FAQ + L N+ + GP GCGK+++V + SL I V E+
Sbjct: 358 FPHEFAQVRNAVFLHQNIYINGPKGCGKSNLVHSLFDYYSLNSIYFQMIVSCSEIDRSSF 417
Query: 920 GASEQAVRDIFSKATAAAPCLLFFDE 945
+ ++F +A P +++ D+
Sbjct: 418 AKFQSFWNNVFIQAERYEPSIIYLDD 443
>sp|Q8NB90|SPAT5_HUMAN Spermatogenesis-associated protein 5 OS=Homo sapiens GN=SPATA5 PE=1
SV=3
Length = 893
Score = 227 bits (578), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 142/411 (34%), Positives = 216/411 (52%), Gaps = 22/411 (5%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F +Y +P P +L++GPPG+GKT +A+AVA + + ++ + S+ E +R
Sbjct: 379 FKSYGIPAPRGVLLYGPPGTGKTMIARAVANEVGAYVSVINGPEII--SKFYGETEAKLR 436
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
Q +EA PSI+ D LD++ EG+Q + L +MD G
Sbjct: 437 Q----IFAEATLRHPSIIFIDELDALCPKR---EGAQNEVEKRVVASLLT-LMDGIG--- 485
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
S G + + + + +L GRFD +++ P A +R IL+ ++R
Sbjct: 486 -SEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDRLDILQKLLRRVPHLL 544
Query: 762 SDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVR---DDFSQ 818
++ LL +A+ GY DL++L + A+ R L + LV+ DF Q
Sbjct: 545 TEAELLQLANSAHGYVGADLKVLCNEAGLCALRRILKKQPNLPDVKVAGLVKITLKDFLQ 604
Query: 819 AMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLR 878
AM++ P AMR+I + + W D+GGL I+ +++ +E P K P F + ++
Sbjct: 605 AMNDIRPSAMREI---AIDVPNVSWSDIGGLESIKLKLEQAVEWPLKHPESFIRMGIQPP 661
Query: 879 SNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAP 938
VLLYGPPGC KT I A A L F+++KGPEL+NKY+G SE+AVR+ F KA A AP
Sbjct: 662 KGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFRKARAVAP 721
Query: 939 CLLFFDEFDSIAPKRGHD--NTGVTDRVVNQFLTELDGVEVLTGVFVFAAT 987
++FFDE D++A +RG V DRV+ Q LTE+DG+E L V + AAT
Sbjct: 722 SIIFFDELDALAVERGSSLGAGNVADRVLAQLLTEMDGIEQLKDVTILAAT 772
Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/148 (41%), Positives = 84/148 (56%), Gaps = 3/148 (2%)
Query: 843 WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 902
+D +GGL+ AI+E+IELP K P +F + VLLYGPPG GKT I A A
Sbjct: 352 YDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVANEV 411
Query: 903 SLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD 962
+ GPE+++K+ G +E +R IF++AT P ++F DE D++ PKR V
Sbjct: 412 GAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPKREGAQNEVEK 471
Query: 963 RVVNQFLTELDGV--EVLTG-VFVFAAT 987
RVV LT +DG+ EV G V V AT
Sbjct: 472 RVVASLLTLMDGIGSEVSEGQVLVLGAT 499
Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 107/246 (43%), Gaps = 45/246 (18%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII--------R 641
P +L++GPPG KT +AKA+A + + F+ KGP +
Sbjct: 661 PKGVLLYGPPGCSKTMIAKALANE--------SGLNFLAI------KGPELMNKYVGESE 706
Query: 642 QALSNFISEALDHAPSIVIFDNLDSI-ISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEK 700
+A+ +A APSI+ FD LD++ + S + V+A +D +++ +
Sbjct: 707 RAVRETFRKARAVAPSIIFFDELDALAVERGSSLGAGNVADRVLAQLLTEMDGIEQLKD- 765
Query: 701 RKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLE 760
+ +A+ ++I ++L GR D + +P P A+ R+ I ++Q S+
Sbjct: 766 ---------VTILAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREIF--KLQFHSMP 814
Query: 761 CSDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFSQA 819
S+E+ LD + + D Y ++ + A+ + ++ ++H F+QA
Sbjct: 815 VSNEVDLDELILQTDAYSGAEIVAVCREAALLALEEDIQANLIMKRH---------FTQA 865
Query: 820 MHEFLP 825
+ P
Sbjct: 866 LSTVTP 871
>sp|Q58556|Y1156_METJA Cell division cycle protein 48 homolog MJ1156 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ1156 PE=3 SV=1
Length = 903
Score = 226 bits (575), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 147/422 (34%), Positives = 213/422 (50%), Gaps = 46/422 (10%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII- 640
F + P +L+ GPPG+GKT LAKAVA + + GP I
Sbjct: 205 FEKLGIEPPKGVLLVGPPGTGKTLLAKAVANE--------------AGANFYVINGPEIM 250
Query: 641 -------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDI 693
+ L EA ++APSI+ D +D+I + G L L+ +
Sbjct: 251 SKYVGETEENLRKIFEEAEENAPSIIFIDEIDAIAPKRDEATGEVERR----LVAQLLTL 306
Query: 694 MDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHE 753
MD G G + + + + +L GRFD + + P RK IL+
Sbjct: 307 MD-------GLKGRGQVVVIGATNRPNALDPALRRPGRFDREIVIGVPDREGRKEILQ-- 357
Query: 754 IQRRSLECSDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLHS-DSSFEKHIKPTL 811
I R++ ++++ LD +A G+ DL L A+ R L S D E+ K L
Sbjct: 358 IHTRNMPLAEDVDLDYLADVTHGFVGADLAALCKEAAMRALRRVLPSIDLEAEEIPKEVL 417
Query: 812 -----VRDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKF 866
DDF +A+ + P AMR++ E W+D+GGL +++ ++E +E P K
Sbjct: 418 DNLKVTMDDFKEALKDVEPSAMREVL---VEVPNVKWEDIGGLEEVKQELREAVEWPLKA 474
Query: 867 PNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAV 926
+F + +R VLL+GPPG GKT + A A FISVKGPE+ +K++G SE+A+
Sbjct: 475 KEVFEKIGVRPPKGVLLFGPPGTGKTLLAKAVANESGANFISVKGPEIFSKWVGESEKAI 534
Query: 927 RDIFSKATAAAPCLLFFDEFDSIAPKRGHD-NTGVTDRVVNQFLTELDGVEVLTGVFVFA 985
R+IF KA +APC++FFDE D+IAPKRG D ++ VTD+VVNQ LTELDG+E V V A
Sbjct: 535 REIFRKARQSAPCIIFFDEIDAIAPKRGRDLSSAVTDKVVNQLLTELDGMEEPKDVVVIA 594
Query: 986 AT 987
AT
Sbjct: 595 AT 596
Score = 124 bits (310), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 86/145 (59%)
Query: 843 WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 902
++D+GGL + ++EMIELP + P +F + + VLL GPPG GKT + A A
Sbjct: 178 YEDIGGLKEEVKKVREMIELPMRHPELFEKLGIEPPKGVLLVGPPGTGKTLLAKAVANEA 237
Query: 903 SLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD 962
F + GPE+++KY+G +E+ +R IF +A AP ++F DE D+IAPKR V
Sbjct: 238 GANFYVINGPEIMSKYVGETEENLRKIFEEAEENAPSIIFIDEIDAIAPKRDEATGEVER 297
Query: 963 RVVNQFLTELDGVEVLTGVFVFAAT 987
R+V Q LT +DG++ V V AT
Sbjct: 298 RLVAQLLTLMDGLKGRGQVVVIGAT 322
Score = 63.2 bits (152), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 117/293 (39%), Gaps = 48/293 (16%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII- 640
F + P +L+ GPPG+GKT LAKAVA + F+ KGP I
Sbjct: 478 FEKIGVRPPKGVLLFGPPGTGKTLLAKAVANESGAN--------FISV------KGPEIF 523
Query: 641 -------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDI 693
+A+ +A AP I+ FD +D+I S + V+ +D
Sbjct: 524 SKWVGESEKAIREIFRKARQSAPCIIFFDEIDAIAPKRGRDLSSAVTDKVVNQLLTELDG 583
Query: 694 MDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHE 753
M+E + + +A+ + I +L GR D + +P P R I +
Sbjct: 584 MEEPKD----------VVVIAATNRPDIIDPALLRPGRLDRVILVPVPDEKARLDIFK-- 631
Query: 754 IQRRSLECSDEI-LLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTL- 811
I RS+ ++++ L ++A K +GY D+E L AV + E ++ +
Sbjct: 632 IHTRSMNLAEDVNLEELAKKTEGYTGADIEALCREAAMLAVRESIGKPWDIEVKLRELIN 691
Query: 812 ----VRDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMI 860
+ F A E V + SAE G ++++NAI ++I
Sbjct: 692 YLQSISGTFRAAAVELNSVIKATKERESAEAGE--------FSELKNAIGKII 736
>sp|Q07590|SAV_SULAC Protein SAV OS=Sulfolobus acidocaldarius (strain ATCC 33909 / DSM
639 / JCM 8929 / NBRC 15157 / NCIMB 11770) GN=sav PE=3
SV=2
Length = 780
Score = 222 bits (565), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 139/424 (32%), Positives = 224/424 (52%), Gaps = 48/424 (11%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII- 640
F + P IL++GPPG+GKT LA+A+A + + F+ + GP I
Sbjct: 238 FQRLGIDPPKGILLYGPPGTGKTLLARALANEIGAY--------FITVN------GPEIM 283
Query: 641 -------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDI 693
Q + EA ++APSI+ D +D+I D G + V+A L+ +
Sbjct: 284 SKFYGESEQRIREIFKEAEENAPSIIFIDEIDAIAPKREDVTG-EVEKRVVAQ---LLTL 339
Query: 694 MDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHE 753
MD G K G G + + + + I +L GRFD +++ P RK IL+
Sbjct: 340 MD--GIK-----GRGRVIVIGATNRPDAIDPALRRPGRFDREIEIRPPDTKGRKDILQ-- 390
Query: 754 IQRRSLECSDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLHSDS-SFEKHIKPTL 811
+ R++ +D++ LD +A GY DL L A+ R++ + ++ P
Sbjct: 391 VHTRNMPITDDVDLDKLAEMTYGYTGADLAALAKEAAIYALRRFVDEKKLNLDQPTIPAE 450
Query: 812 VRDDFSQAMHEFL-------PVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPS 864
+ + +M++FL P +R++ E + W+D+GGL +++ ++E +E P
Sbjct: 451 IIKELKVSMNDFLNALKSIQPSLLREVY---VEVPKVNWNDIGGLDNVKQQLREAVEWPL 507
Query: 865 KFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQ 924
+FP +F ++ + +LL+GPPG GKT + A A FI+V+GPE+L+K++G SE+
Sbjct: 508 RFPELFTKSGVTPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWVGESEK 567
Query: 925 AVRDIFSKATAAAPCLLFFDEFDSIAPKRG-HDNTGVTDRVVNQFLTELDGVEVLTGVFV 983
A+R+IF KA AAP ++FFDE DSIAP RG ++GVT+R+VNQ L E+DG+ L V +
Sbjct: 568 AIREIFRKARQAAPTVIFFDEIDSIAPIRGLSTDSGVTERIVNQLLAEMDGIVPLNKVVI 627
Query: 984 FAAT 987
AAT
Sbjct: 628 IAAT 631
Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 91/146 (62%), Gaps = 2/146 (1%)
Query: 843 WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 902
W+D+G L + + I+E++E P + P +F + + +LLYGPPG GKT + A A
Sbjct: 211 WEDIGDLEEAKQKIREIVEWPMRHPELFQRLGIDPPKGILLYGPPGTGKTLLARALANEI 270
Query: 903 SLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTG-VT 961
FI+V GPE+++K+ G SEQ +R+IF +A AP ++F DE D+IAPKR D TG V
Sbjct: 271 GAYFITVNGPEIMSKFYGESEQRIREIFKEAEENAPSIIFIDEIDAIAPKR-EDVTGEVE 329
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAAT 987
RVV Q LT +DG++ V V AT
Sbjct: 330 KRVVAQLLTLMDGIKGRGRVIVIGAT 355
Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 112/257 (43%), Gaps = 35/257 (13%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F+ + P IL+ GPPG+GKT LAKAVA E + +A S+ E IR
Sbjct: 513 FTKSGVTPPKGILLFGPPGTGKTMLAKAVA--TESGANFIAVRGPEILSKWVGESEKAIR 570
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+ +A AP+++ FD +DSI S + ++ + L + MD
Sbjct: 571 E----IFRKARQAAPTVIFFDEIDSIAPIRGLSTDSGVTERIV--NQLLAE-MD------ 617
Query: 702 KSSCGIGP---IAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRS 758
GI P + +A+ + + +L GRFD + +P P + R IL+ +
Sbjct: 618 ----GIVPLNKVVIIAATNRPDILDPALLRPGRFDRLIYVPPPDKTARFEILKVHTKNVP 673
Query: 759 LECSDEILLDVASKCDGYDAYDLEILV-DRTVHAAVGRYLHSDSS-----------FEKH 806
L D L D+A K +GY DLE LV + T++A Y D ++KH
Sbjct: 674 L-AEDVSLEDIAEKAEGYTGADLEALVREATINAMRSIYSMCDKQSRDECKGNMECYQKH 732
Query: 807 IKPTLVRDDFSQAMHEF 823
IK + + F + +F
Sbjct: 733 IKECMNKTSFKVSKEDF 749
>sp|P23787|TERA_XENLA Transitional endoplasmic reticulum ATPase OS=Xenopus laevis GN=vcp
PE=1 SV=3
Length = 805
Score = 206 bits (525), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 142/416 (34%), Positives = 217/416 (52%), Gaps = 32/416 (7%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R
Sbjct: 230 FKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLR 287
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A EA +AP+I+ D LD+I G + L+ +MD G K+
Sbjct: 288 KAFE----EAEKNAPAIIFIDELDAIAPKREKTHGEVERR----IVSQLLTLMD--GLKQ 337
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
++ + +A+ I +L GRFD V + P ++ R IL+ I ++++
Sbjct: 338 RAH-----VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEILQ--IHTKNMKL 390
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 814
SD++ L+ VA++ G+ DL L A+ + + D + + + +L D
Sbjct: 391 SDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMD 450
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
DF A+ + P A+R+ T E + W+D+GGL D++ ++E+++ P + P+ F +
Sbjct: 451 DFRWALSQSNPSALRE---TVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFG 507
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
+ VL YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA
Sbjct: 508 MTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKAR 567
Query: 935 AAAPCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAAT 987
AAPC+LFFDE DSIA R D G DRV+NQ LTE+DG+ + VF+ AT
Sbjct: 568 QAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSIKKNVFIIGAT 623
Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 85/146 (58%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG IKEM+ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V
Sbjct: 262 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE 321
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAAT 987
R+V+Q LT +DG++ V V AAT
Sbjct: 322 RRIVSQLLTLMDGLKQRAHVIVMAAT 347
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 102/268 (38%), Gaps = 48/268 (17%)
Query: 576 PDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLE 635
PD L F P G +L +GPPG GKT LAKA+A C +
Sbjct: 500 PDKFLKFGMT--PSKG-VLFYGPPGCGKTLLAKAIANE--------------CQANFISI 542
Query: 636 KGPII--------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALT 687
KGP + + +A AP ++ FD LDSI + G + +
Sbjct: 543 KGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVIN 602
Query: 688 KFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERK 747
+ L + MD K+ + + + + I ++ GR D + +P P R
Sbjct: 603 QILTE-MDGMSIKKN-------VFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRM 654
Query: 748 AILEHEIQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHI 807
AIL+ + R+S D + +A +G+ DL + R A+ + ++ E+
Sbjct: 655 AILKANL-RKSPVAKDVDVDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERDR 713
Query: 808 K--------------PTLVRDDFSQAMH 821
+ P + RD F +AM
Sbjct: 714 QTNPSAMEVEEDDPVPEIRRDHFEEAMR 741
>sp|Q3ZBT1|TERA_BOVIN Transitional endoplasmic reticulum ATPase OS=Bos taurus GN=VCP PE=2
SV=1
Length = 806
Score = 205 bits (522), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 142/416 (34%), Positives = 216/416 (51%), Gaps = 32/416 (7%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R
Sbjct: 230 FKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLR 287
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A EA +AP+I+ D LD+I G + L+ +MD G K+
Sbjct: 288 KAFE----EAEKNAPAIIFIDELDAIAPKREKTHGEVERR----IVSQLLTLMD--GLKQ 337
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
++ + +A+ I +L GRFD V + P A+ R IL+ I ++++
Sbjct: 338 RAH-----VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ--IHTKNMKL 390
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 814
+D++ L+ VA++ G+ DL L A+ + + D + + + +L D
Sbjct: 391 ADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMD 450
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
DF A+ + P A+R+ T E + W+D+GGL D++ ++E+++ P + P+ F +
Sbjct: 451 DFRWALSQSNPSALRE---TVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFG 507
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
+ VL YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA
Sbjct: 508 MTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKAR 567
Query: 935 AAAPCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAAT 987
AAPC+LFFDE DSIA R D G DRV+NQ LTE+DG+ VF+ AT
Sbjct: 568 QAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGAT 623
Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 85/146 (58%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG IKEM+ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V
Sbjct: 262 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE 321
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAAT 987
R+V+Q LT +DG++ V V AAT
Sbjct: 322 RRIVSQLLTLMDGLKQRAHVIVMAAT 347
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 87/225 (38%), Gaps = 34/225 (15%)
Query: 576 PDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLE 635
PD L F P G +L +GPPG GKT LAKA+A C +
Sbjct: 500 PDKFLKFGMT--PSKG-VLFYGPPGCGKTLLAKAIANE--------------CQANFISI 542
Query: 636 KGPII--------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALT 687
KGP + + +A AP ++ FD LDSI + G + +
Sbjct: 543 KGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVIN 602
Query: 688 KFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERK 747
+ L + MD K+ + + + + I ++ GR D + +P P R
Sbjct: 603 QILTE-MDGMSTKKN-------VFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRV 654
Query: 748 AILEHEIQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVHAA 792
AIL+ + R+S D L +A +G+ DL + R A
Sbjct: 655 AILKANL-RKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLA 698
>sp|Q6GL04|TERA_XENTR Transitional endoplasmic reticulum ATPase OS=Xenopus tropicalis
GN=vcp PE=2 SV=1
Length = 805
Score = 205 bits (522), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 143/416 (34%), Positives = 216/416 (51%), Gaps = 32/416 (7%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R
Sbjct: 230 FKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLR 287
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A EA +AP+I+ D LD+I G V L + +MD G K+
Sbjct: 288 KAFE----EAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQL----LTLMD--GLKQ 337
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
++ + +A+ I +L GRFD V + P ++ R IL+ I ++++
Sbjct: 338 RAH-----VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEILQ--IHTKNMKL 390
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 814
SD++ L+ VA++ G+ DL L A+ + + D + + + +L D
Sbjct: 391 SDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMD 450
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
DF A+ + P A+R+ T E + W+D+GGL D++ ++E+++ P + P+ F +
Sbjct: 451 DFRWALSQSNPSALRE---TVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFG 507
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
+ VL YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA
Sbjct: 508 MTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKAR 567
Query: 935 AAAPCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAAT 987
AAPC+LFFDE DSIA R D G DRV+NQ LTE+DG+ VF+ AT
Sbjct: 568 QAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGAT 623
Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 85/146 (58%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG IKEM+ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V
Sbjct: 262 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE 321
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAAT 987
R+V+Q LT +DG++ V V AAT
Sbjct: 322 RRIVSQLLTLMDGLKQRAHVIVMAAT 347
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 88/226 (38%), Gaps = 34/226 (15%)
Query: 576 PDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLE 635
PD L F P G +L +GPPG GKT LAKA+A C +
Sbjct: 500 PDKFLKFGMT--PSKG-VLFYGPPGCGKTLLAKAIANE--------------CQANFISI 542
Query: 636 KGPII--------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALT 687
KGP + + +A AP ++ FD LDSI + G + +
Sbjct: 543 KGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVIN 602
Query: 688 KFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERK 747
+ L + MD K+ + + + + I ++ GR D + +P P R
Sbjct: 603 QILTE-MDGMSTKKN-------VFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRI 654
Query: 748 AILEHEIQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVHAAV 793
AIL+ + R+S D L +A +G+ DL + R A+
Sbjct: 655 AILKANL-RKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAI 699
>sp|P46462|TERA_RAT Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus
GN=Vcp PE=1 SV=3
Length = 806
Score = 205 bits (522), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 142/416 (34%), Positives = 216/416 (51%), Gaps = 32/416 (7%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R
Sbjct: 230 FKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLR 287
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A EA +AP+I+ D LD+I G + L+ +MD G K+
Sbjct: 288 KAFE----EAEKNAPAIIFIDELDAIAPKREKTHGEVERR----IVSQLLTLMD--GLKQ 337
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
++ + +A+ I +L GRFD V + P A+ R IL+ I ++++
Sbjct: 338 RAH-----VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ--IHTKNMKL 390
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 814
+D++ L+ VA++ G+ DL L A+ + + D + + + +L D
Sbjct: 391 ADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMD 450
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
DF A+ + P A+R+ T E + W+D+GGL D++ ++E+++ P + P+ F +
Sbjct: 451 DFRWALSQSNPSALRE---TVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFG 507
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
+ VL YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA
Sbjct: 508 MTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKAR 567
Query: 935 AAAPCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAAT 987
AAPC+LFFDE DSIA R D G DRV+NQ LTE+DG+ VF+ AT
Sbjct: 568 QAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGAT 623
Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 85/146 (58%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG IKEM+ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V
Sbjct: 262 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE 321
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAAT 987
R+V+Q LT +DG++ V V AAT
Sbjct: 322 RRIVSQLLTLMDGLKQRAHVIVMAAT 347
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 87/225 (38%), Gaps = 34/225 (15%)
Query: 576 PDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLE 635
PD L F P G +L +GPPG GKT LAKA+A C +
Sbjct: 500 PDKFLKFGMT--PSKG-VLFYGPPGCGKTLLAKAIANE--------------CQANFISI 542
Query: 636 KGPII--------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALT 687
KGP + + +A AP ++ FD LDSI + G + +
Sbjct: 543 KGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVIN 602
Query: 688 KFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERK 747
+ L + MD K+ + + + + I ++ GR D + +P P R
Sbjct: 603 QILTE-MDGMSTKKN-------VFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRV 654
Query: 748 AILEHEIQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVHAA 792
AIL+ + R+S D L +A +G+ DL + R A
Sbjct: 655 AILKANL-RKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLA 698
>sp|Q01853|TERA_MOUSE Transitional endoplasmic reticulum ATPase OS=Mus musculus GN=Vcp
PE=1 SV=4
Length = 806
Score = 205 bits (522), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 142/416 (34%), Positives = 216/416 (51%), Gaps = 32/416 (7%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R
Sbjct: 230 FKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLR 287
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A EA +AP+I+ D LD+I G + L+ +MD G K+
Sbjct: 288 KAFE----EAEKNAPAIIFIDELDAIAPKREKTHGEVERR----IVSQLLTLMD--GLKQ 337
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
++ + +A+ I +L GRFD V + P A+ R IL+ I ++++
Sbjct: 338 RAH-----VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ--IHTKNMKL 390
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 814
+D++ L+ VA++ G+ DL L A+ + + D + + + +L D
Sbjct: 391 ADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMD 450
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
DF A+ + P A+R+ T E + W+D+GGL D++ ++E+++ P + P+ F +
Sbjct: 451 DFRWALSQSNPSALRE---TVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFG 507
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
+ VL YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA
Sbjct: 508 MTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKAR 567
Query: 935 AAAPCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAAT 987
AAPC+LFFDE DSIA R D G DRV+NQ LTE+DG+ VF+ AT
Sbjct: 568 QAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGAT 623
Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 85/146 (58%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG IKEM+ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V
Sbjct: 262 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE 321
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAAT 987
R+V+Q LT +DG++ V V AAT
Sbjct: 322 RRIVSQLLTLMDGLKQRAHVIVMAAT 347
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 87/225 (38%), Gaps = 34/225 (15%)
Query: 576 PDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLE 635
PD L F P G +L +GPPG GKT LAKA+A C +
Sbjct: 500 PDKFLKFGMT--PSKG-VLFYGPPGCGKTLLAKAIANE--------------CQANFISI 542
Query: 636 KGPII--------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALT 687
KGP + + +A AP ++ FD LDSI + G + +
Sbjct: 543 KGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVIN 602
Query: 688 KFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERK 747
+ L + MD K+ + + + + I ++ GR D + +P P R
Sbjct: 603 QILTE-MDGMSTKKN-------VFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRV 654
Query: 748 AILEHEIQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVHAA 792
AIL+ + R+S D L +A +G+ DL + R A
Sbjct: 655 AILKANL-RKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLA 698
>sp|P55072|TERA_HUMAN Transitional endoplasmic reticulum ATPase OS=Homo sapiens GN=VCP
PE=1 SV=4
Length = 806
Score = 205 bits (522), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 142/416 (34%), Positives = 216/416 (51%), Gaps = 32/416 (7%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R
Sbjct: 230 FKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLR 287
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A EA +AP+I+ D LD+I G + L+ +MD G K+
Sbjct: 288 KAFE----EAEKNAPAIIFIDELDAIAPKREKTHGEVERR----IVSQLLTLMD--GLKQ 337
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
++ + +A+ I +L GRFD V + P A+ R IL+ I ++++
Sbjct: 338 RAH-----VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ--IHTKNMKL 390
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 814
+D++ L+ VA++ G+ DL L A+ + + D + + + +L D
Sbjct: 391 ADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMD 450
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
DF A+ + P A+R+ T E + W+D+GGL D++ ++E+++ P + P+ F +
Sbjct: 451 DFRWALSQSNPSALRE---TVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFG 507
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
+ VL YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA
Sbjct: 508 MTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKAR 567
Query: 935 AAAPCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAAT 987
AAPC+LFFDE DSIA R D G DRV+NQ LTE+DG+ VF+ AT
Sbjct: 568 QAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGAT 623
Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 85/146 (58%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG IKEM+ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V
Sbjct: 262 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE 321
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAAT 987
R+V+Q LT +DG++ V V AAT
Sbjct: 322 RRIVSQLLTLMDGLKQRAHVIVMAAT 347
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 87/225 (38%), Gaps = 34/225 (15%)
Query: 576 PDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLE 635
PD L F P G +L +GPPG GKT LAKA+A C +
Sbjct: 500 PDKFLKFGMT--PSKG-VLFYGPPGCGKTLLAKAIANE--------------CQANFISI 542
Query: 636 KGPII--------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALT 687
KGP + + +A AP ++ FD LDSI + G + +
Sbjct: 543 KGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVIN 602
Query: 688 KFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERK 747
+ L + MD K+ + + + + I ++ GR D + +P P R
Sbjct: 603 QILTE-MDGMSTKKN-------VFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRV 654
Query: 748 AILEHEIQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVHAA 792
AIL+ + R+S D L +A +G+ DL + R A
Sbjct: 655 AILKANL-RKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLA 698
>sp|P03974|TERA_PIG Transitional endoplasmic reticulum ATPase OS=Sus scrofa GN=VCP PE=1
SV=5
Length = 806
Score = 204 bits (518), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 141/416 (33%), Positives = 216/416 (51%), Gaps = 32/416 (7%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R
Sbjct: 230 FKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLR 287
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A EA +AP+I+ D LD+I G + L+ +MD G K+
Sbjct: 288 KAFE----EAEKNAPAIIFIDELDAIAPKREKTHGEVERR----IVSQLLTLMD--GLKQ 337
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
++ + +A+ I +L GRFD V + P A+ R IL+ I ++++
Sbjct: 338 RAH-----VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ--IHTKNMKL 390
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 814
+D++ L+ VA++ G+ DL L A+ + + D + + + +L D
Sbjct: 391 ADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMD 450
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
DF A+ + P A+R+ T E + W+D+GGL D++ ++++++ P + P+ F +
Sbjct: 451 DFRWALSQSNPSALRE---TVVEVPQVTWEDIGGLEDVKRELQDLVQYPVEHPDKFLKFG 507
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
+ VL YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA
Sbjct: 508 MTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKAR 567
Query: 935 AAAPCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAAT 987
AAPC+LFFDE DSIA R D G DRV+NQ LTE+DG+ VF+ AT
Sbjct: 568 QAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGAT 623
Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 85/146 (58%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG IKEM+ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V
Sbjct: 262 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE 321
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAAT 987
R+V+Q LT +DG++ V V AAT
Sbjct: 322 RRIVSQLLTLMDGLKQRAHVIVMAAT 347
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 87/225 (38%), Gaps = 34/225 (15%)
Query: 576 PDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLE 635
PD L F P G +L +GPPG GKT LAKA+A C +
Sbjct: 500 PDKFLKFGMT--PSKG-VLFYGPPGCGKTLLAKAIANE--------------CQANFISI 542
Query: 636 KGPII--------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALT 687
KGP + + +A AP ++ FD LDSI + G + +
Sbjct: 543 KGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVIN 602
Query: 688 KFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERK 747
+ L + MD K+ + + + + I ++ GR D + +P P R
Sbjct: 603 QILTE-MDGMSTKKN-------VFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRV 654
Query: 748 AILEHEIQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVHAA 792
AIL+ + R+S D L +A +G+ DL + R A
Sbjct: 655 AILKANL-RKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLA 698
>sp|Q7ZU99|TERA_DANRE Transitional endoplasmic reticulum ATPase OS=Danio rerio GN=vcp
PE=1 SV=1
Length = 806
Score = 204 bits (518), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 142/416 (34%), Positives = 215/416 (51%), Gaps = 32/416 (7%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R
Sbjct: 230 FKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLR 287
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A EA +AP+I+ D LD+I G + L+ +MD G K+
Sbjct: 288 KAFE----EAEKNAPAIIFIDELDAIAPKREKTHGEVERR----IVSQLLTLMD--GLKQ 337
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
++ + +A+ I +L GRFD V + P A+ R IL+ I ++++
Sbjct: 338 RAH-----VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ--IHTKNMKL 390
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 814
+D++ L+ VA++ G+ DL L A+ + + D + + + +L D
Sbjct: 391 ADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMD 450
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
DF A+ + P A+R+ T E W+D+GGL D++ ++E+++ P + P+ F +
Sbjct: 451 DFRWALSQSNPSALRE---TVVEVPNITWEDIGGLDDVKRELQELVQYPVEHPDKFLKFG 507
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
+ VL YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA
Sbjct: 508 MTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKAR 567
Query: 935 AAAPCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAAT 987
AAPC+LFFDE DSIA R D G DRV+NQ LTE+DG+ VF+ AT
Sbjct: 568 QAAPCVLFFDELDSIAKARGGNVGDGGGAADRVINQILTEMDGMSSKKNVFIIGAT 623
Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 86/146 (58%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG+ IKEM+ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 202 GYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V
Sbjct: 262 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE 321
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAAT 987
R+V+Q LT +DG++ V V AAT
Sbjct: 322 RRIVSQLLTLMDGLKQRAHVIVMAAT 347
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 103/256 (40%), Gaps = 42/256 (16%)
Query: 553 VSSLSWMGTTASDVINR-IKVLLS-----PDSGLWFSTYHLPLPGHILIHGPPGSGKTSL 606
V +++W D + R ++ L+ PD L F P G +L +GPPG GKT L
Sbjct: 471 VPNITWEDIGGLDDVKRELQELVQYPVEHPDKFLKFGMT--PSKG-VLFYGPPGCGKTLL 527
Query: 607 AKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII--------RQALSNFISEALDHAPSI 658
AKA+A C + KGP + + +A AP +
Sbjct: 528 AKAIANE--------------CQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCV 573
Query: 659 VIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGPIAFVASAQS 718
+ FD LDSI + G + + + L + MD K+ + + +
Sbjct: 574 LFFDELDSIAKARGGNVGDGGGAADRVINQILTE-MDGMSSKKN-------VFIIGATNR 625
Query: 719 LEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLD-VASKCDGYD 777
+ I ++ GR D + +P P R AIL+ +++ + S ++ LD +A +G+
Sbjct: 626 PDIIDPAILRPGRLDQLIYIPLPDEKSRIAILKANLRKSPI--SKDVDLDFLAKMTNGFS 683
Query: 778 AYDLEILVDRTVHAAV 793
DL + R A+
Sbjct: 684 GADLTEICQRACKLAI 699
>sp|Q54CS8|PEX6_DICDI Peroxisomal biogenesis factor 6 OS=Dictyostelium discoideum GN=pex6
PE=3 SV=1
Length = 1201
Score = 203 bits (516), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 124/411 (30%), Positives = 220/411 (53%), Gaps = 33/411 (8%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEAL 652
+L++GP G GK +L VAK + H+ V C +L + N + +A
Sbjct: 670 LLLNGPQGVGKRTLLNRVAKQMG------IHVYEVDCYKLYDFVESKKDWNIRNVLEQAS 723
Query: 653 DHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIG--PI 710
+ P+++I N + + ++ + + ++ L++ L++I+ + + S+ P+
Sbjct: 724 NSTPTLLILKNFEVLEQTAQSMQQEKKESN---LSQTLINILKDINDSNTSNINSNKYPL 780
Query: 711 AFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEI-LLDV 769
+ S++++ + F + L +P ++R IL++ + ++ + + + ++
Sbjct: 781 IITVTVNSMDELSNKV--RNWFKHEITLNSPDENQRFKILKYLTKNLPIDIGNTVSIKNL 838
Query: 770 ASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPT--------LVRDDFSQAMH 821
+ + + +L L+ R+ A+ R L IKP ++ DD +++
Sbjct: 839 SIRTASFLNSNLRALIQRSSINALKRVLSIQQMMNDEIKPIEIYNCGFLVMGDDIQKSLS 898
Query: 822 EFLPVAMRDITKTSAEGGR---SGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLR 878
E M++ +S + WDDVGGL ++++ I + I+LP + P++FA + R
Sbjct: 899 E-----MQEYQSSSIGAPKIPNVSWDDVGGLANVKSEIMDTIQLPLEHPHLFASG-IGKR 952
Query: 879 SNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAP 938
S +LL+GPPG GKT + A A CSL F+SVKGPEL+N YIG SE+ +R+IF+KA A P
Sbjct: 953 SGILLFGPPGTGKTLLAKAIATECSLNFLSVKGPELINMYIGESEKNIREIFNKARQAKP 1012
Query: 939 CLLFFDEFDSIAPKRGH--DNTGVTDRVVNQFLTELDGVEVLTGVFVFAAT 987
C++FFDE DS+AP RG+ D+ GV DRVV+Q L ELDG++ + VF+ AT
Sbjct: 1013 CVIFFDELDSLAPSRGNGADSGGVMDRVVSQLLAELDGMQKSSDVFIIGAT 1063
>sp|Q7KN62|TERA_DROME Transitional endoplasmic reticulum ATPase TER94 OS=Drosophila
melanogaster GN=TER94 PE=1 SV=1
Length = 801
Score = 202 bits (514), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 138/416 (33%), Positives = 211/416 (50%), Gaps = 32/416 (7%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R
Sbjct: 227 FKAIGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLR 284
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A EA ++P+I+ D +D+I G + L+ +MD G K+
Sbjct: 285 KAFE----EAEKNSPAIIFIDEIDAIAPKRDKTHGEVERR----IVSQLLTLMD--GMKK 334
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
S + +A+ I +L GRFD + + P A+ R +L I ++++
Sbjct: 335 SSH-----LIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEVLR--IHTKNMKL 387
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 814
D++ L+ +A++ G+ DL L + + D + + +L +
Sbjct: 388 HDDVDLEQIAAESHGHVGADLASLCSEAALQQIREKMDLIDLEDDKIDAEVLASLAVTME 447
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
+F AM + P A+R+ T E + W D+GGL ++ ++E+++ P + P+ F +
Sbjct: 448 NFRYAMTKSSPSALRE---TVVEVPNTTWTDIGGLESVKKELQELVQYPVEHPDKFLKFG 504
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
++ VL YGPPGCGKT + A A C FISVKGPELL + G SE VRDIF KA
Sbjct: 505 MQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKAR 564
Query: 935 AAAPCLLFFDEFDSIAPKRG---HDNTGVTDRVVNQFLTELDGVEVLTGVFVFAAT 987
+AAPC+LFFDE DSIA RG D G DRV+NQ LTE+DG+ VF+ AT
Sbjct: 565 SAAPCVLFFDELDSIAKARGGNVGDAGGAADRVINQILTEMDGMGAKKNVFIIGAT 620
Score = 119 bits (299), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 87/146 (59%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG IKEM+ELP + P++F ++ +L+YGPPG GKT I A A
Sbjct: 199 GYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANE 258
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A +P ++F DE D+IAPKR + V
Sbjct: 259 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAIAPKRDKTHGEVE 318
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAAT 987
R+V+Q LT +DG++ + + V AAT
Sbjct: 319 RRIVSQLLTLMDGMKKSSHLIVMAAT 344
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 96/239 (40%), Gaps = 34/239 (14%)
Query: 576 PDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLE 635
PD L F P G +L +GPPG GKT LAKA+A C +
Sbjct: 497 PDKFLKFGMQ--PSRG-VLFYGPPGCGKTLLAKAIANE--------------CQANFISV 539
Query: 636 KGPII--------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALT 687
KGP + + + +A AP ++ FD LDSI + G + +
Sbjct: 540 KGPELLTMWFGESEANVRDIFDKARSAAPCVLFFDELDSIAKARGGNVGDAGGAADRVIN 599
Query: 688 KFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERK 747
+ L + MD G K+ + + + + I ++ GR D + +P P R+
Sbjct: 600 QILTE-MDGMGAKKN-------VFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDDKSRE 651
Query: 748 AILEHEIQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKH 806
AIL+ + R+S + L +A G+ DL + R A+ + + ++ EK
Sbjct: 652 AILKANL-RKSPLAKEVDLTYIAKVTQGFSGADLTEICQRACKLAIRQAIEAEIRREKE 709
>sp|P25694|CDC48_YEAST Cell division control protein 48 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CDC48 PE=1 SV=3
Length = 835
Score = 201 bits (512), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 143/421 (33%), Positives = 211/421 (50%), Gaps = 42/421 (9%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFV-----CCSRLSLEK 636
F + P +L++GPPG+GKT +A+AVA F+ S+++ E
Sbjct: 240 FKAIGIKPPRGVLMYGPPGTGKTLMARAVANE-------TGAFFFLINGPEVMSKMAGES 292
Query: 637 GPIIRQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDE 696
+R+A EA +AP+I+ D +DSI + D + V++ L+ +MD
Sbjct: 293 ESNLRKAFE----EAEKNAPAIIFIDEIDSI-APKRDKTNGEVERRVVSQ---LLTLMD- 343
Query: 697 YGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQR 756
G K +S+ + +A+ I +L GRFD V + P A+ R +L I
Sbjct: 344 -GMKARSN-----VVVIAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEVLR--IHT 395
Query: 757 RSLECSDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVR-- 813
++++ +D++ L+ +A++ GY D+ L + + E I ++
Sbjct: 396 KNMKLADDVDLEALAAETHGYVGADIASLCSEAAMQQIREKMDLIDLDEDEIDAEVLDSL 455
Query: 814 ----DDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNI 869
D+F A+ P A+R+ T E WDDVGGL +I+ +KE +E P P+
Sbjct: 456 GVTMDNFRFALGNSNPSALRE---TVVESVNVTWDDVGGLDEIKEELKETVEYPVLHPDQ 512
Query: 870 FAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDI 929
+ + L VL YGPPG GKT + A A S FISVKGPELL+ + G SE +RDI
Sbjct: 513 YTKFGLSPSKGVLFYGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDI 572
Query: 930 FSKATAAAPCLLFFDEFDSIAPKRG---HDNTGVTDRVVNQFLTELDGVEVLTGVFVFAA 986
F KA AAAP ++F DE DSIA RG D G +DRVVNQ LTE+DG+ VFV A
Sbjct: 573 FDKARAAAPTVVFLDELDSIAKARGGSLGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGA 632
Query: 987 T 987
T
Sbjct: 633 T 633
Score = 127 bits (319), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 86/146 (58%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG I+EM+ELP + P +F ++ VL+YGPPG GKT + A A
Sbjct: 212 GYDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARAVANE 271
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE DSIAPKR N V
Sbjct: 272 TGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKRDKTNGEVE 331
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAAT 987
RVV+Q LT +DG++ + V V AAT
Sbjct: 332 RRVVSQLLTLMDGMKARSNVVVIAAT 357
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 103/246 (41%), Gaps = 36/246 (14%)
Query: 573 LLSPDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRL 632
+L PD ++ + L +L +GPPG+GKT LAKAVA + + F+
Sbjct: 507 VLHPDQ---YTKFGLSPSKGVLFYGPPGTGKTLLAKAVATEVSAN--------FISV--- 552
Query: 633 SLEKGPII--------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVI 684
KGP + + + +A AP++V D LDSI + G S
Sbjct: 553 ---KGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSLGDAGGASDR 609
Query: 685 ALTKFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAAS 744
+ + L + MD K+ + + + ++I ++ GR D + +P P +
Sbjct: 610 VVNQLLTE-MDGMNAKKN-------VFVIGATNRPDQIDPAILRPGRLDQLIYVPLPDEN 661
Query: 745 ERKAILEHEIQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYL--HSDSS 802
R +IL ++++ LE E L +A G+ DL +V R A+ + H
Sbjct: 662 ARLSILNAQLRKTPLEPGLE-LTAIAKATQGFSGADLLYIVQRAAKYAIKDSIEAHRQHE 720
Query: 803 FEKHIK 808
EK +K
Sbjct: 721 AEKEVK 726
>sp|P54812|TERA2_CAEEL Transitional endoplasmic reticulum ATPase homolog 2
OS=Caenorhabditis elegans GN=cdc-48.2 PE=1 SV=2
Length = 810
Score = 201 bits (510), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 135/416 (32%), Positives = 210/416 (50%), Gaps = 32/416 (7%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + P IL+ GPPG+GKT +A+AVA L+ + S++S E +R
Sbjct: 235 FKAIGVKPPRGILLFGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKMSGESESNLR 292
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A + E ++P+I+ D +D+I G + L+ +MD G K
Sbjct: 293 KAFA----ECEKNSPAILFIDEIDAIAPKREKAHGEVEKR----IVSQLLTLMD--GLKT 342
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
++ + +A+ I +L GRFD + + P A R IL I ++++
Sbjct: 343 RAH-----VVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILR--IHTKNMKL 395
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 814
+++ L+ VA++C G+ DL L + + D + + + +L +
Sbjct: 396 GEDVDLEQVANECHGFVGADLASLCSEAAIQQIREKMELIDLEDDTIDAEVLNSLAVTME 455
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
+F AM + P A+R+ E + W D+GGL +++ ++E+++ P + P + +
Sbjct: 456 NFRFAMGKSSPSALREAV---VETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFG 512
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
++ VL YGPPGCGKT + A A C FIS+KGPELL + G SE VRD+F KA
Sbjct: 513 MQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKAR 572
Query: 935 AAAPCLLFFDEFDSIAPKRG---HDNTGVTDRVVNQFLTELDGVEVLTGVFVFAAT 987
AAAPC+LFFDE DSIA RG D G DRV+NQ LTE+DG+ VF+ AT
Sbjct: 573 AAAPCVLFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGMNAKKNVFIIGAT 628
Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 86/146 (58%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG+ IKEM+ELP + P +F ++ +LL+GPPG GKT I A A
Sbjct: 207 GYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVANE 266
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F++ +P +LF DE D+IAPKR + V
Sbjct: 267 TGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPKREKAHGEVE 326
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAAT 987
R+V+Q LT +DG++ V V AAT
Sbjct: 327 KRIVSQLLTLMDGLKTRAHVVVIAAT 352
>sp|P54774|CDC48_SOYBN Cell division cycle protein 48 homolog OS=Glycine max GN=CDC48 PE=2
SV=1
Length = 807
Score = 199 bits (506), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 139/422 (32%), Positives = 204/422 (48%), Gaps = 44/422 (10%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCC------SRLSLE 635
F + + P IL++GPPGSGKT +A+AVA F C S+L+ E
Sbjct: 234 FKSIGVKPPKGILLYGPPGSGKTLIARAVANE--------TGAFFFCINGPEIMSKLAGE 285
Query: 636 KGPIIRQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMD 695
+R+A EA +APSI+ D +DSI G V L + +MD
Sbjct: 286 SESNLRKAFE----EAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQL----LTLMD 337
Query: 696 EYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQ 755
G K ++ + + + I +L GRFD + + P R +L I
Sbjct: 338 --GLKSRAH-----VIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLR--IH 388
Query: 756 RRSLECSDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPT 810
++++ SD++ L+ +A GY DL L + + D + + + +
Sbjct: 389 TKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEVLNS 448
Query: 811 L--VRDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPN 868
+ + F A+ P A+R+ T E W+D+GGL +++ ++E ++ P + P
Sbjct: 449 MAVTNEHFQTALGTSNPSALRE---TVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPE 505
Query: 869 IFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRD 928
F + + VL YGPPGCGKT + A A C FISVKGPELL + G SE VR+
Sbjct: 506 KFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRE 565
Query: 929 IFSKATAAAPCLLFFDEFDSIAPKRGH---DNTGVTDRVVNQFLTELDGVEVLTGVFVFA 985
IF KA +APC+LFFDE DSIA +RG D G DRV+NQ LTE+DG+ VF+
Sbjct: 566 IFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIG 625
Query: 986 AT 987
AT
Sbjct: 626 AT 627
Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 85/146 (58%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DDVGG+ I+E++ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 206 GYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANE 265
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE DSIAPKR + V
Sbjct: 266 TGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVE 325
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAAT 987
R+V+Q LT +DG++ V V AT
Sbjct: 326 RRIVSQLLTLMDGLKSRAHVIVIGAT 351
>sp|Q9LZF6|CD48E_ARATH Cell division control protein 48 homolog E OS=Arabidopsis thaliana
GN=CDC48E PE=1 SV=2
Length = 810
Score = 197 bits (502), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 139/422 (32%), Positives = 205/422 (48%), Gaps = 44/422 (10%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCC------SRLSLE 635
F + + P IL++GPPGSGKT +A+AVA F C S+L+ E
Sbjct: 233 FKSIGVKPPKGILLYGPPGSGKTLIARAVANE--------TGAFFFCINGPEIMSKLAGE 284
Query: 636 KGPIIRQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMD 695
+R+A EA +APSI+ D +DSI G + L+ +MD
Sbjct: 285 SESNLRKAFE----EAEKNAPSIIFIDEIDSIAPKREKTNGEVERR----IVSQLLTLMD 336
Query: 696 EYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQ 755
G K ++ + + + I +L GRFD + + P R +L I
Sbjct: 337 --GLKSRAH-----VIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLR--IH 387
Query: 756 RRSLECSDEILLDVASK-CDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPT 810
++++ ++++ L+ SK GY DL L + + D S + I +
Sbjct: 388 TKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDDSIDAEILNS 447
Query: 811 LV--RDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPN 868
+ + F A+ P A+R+ T E W+D+GGL +++ ++E ++ P + P
Sbjct: 448 MAVSNEHFHTALGNSNPSALRE---TVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPE 504
Query: 869 IFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRD 928
F + + VL YGPPGCGKT + A A C FISVKGPELL + G SE VR+
Sbjct: 505 KFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRE 564
Query: 929 IFSKATAAAPCLLFFDEFDSIAPKRGH---DNTGVTDRVVNQFLTELDGVEVLTGVFVFA 985
IF KA +APC+LFFDE DSIA +RG+ D G DRV+NQ LTE+DG+ VF+
Sbjct: 565 IFDKARQSAPCVLFFDELDSIATQRGNSAGDAGGAADRVLNQLLTEMDGMNAKKTVFIIG 624
Query: 986 AT 987
AT
Sbjct: 625 AT 626
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 85/146 (58%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DDVGG+ I+E++ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 205 GYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANE 264
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE DSIAPKR N V
Sbjct: 265 TGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVE 324
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAAT 987
R+V+Q LT +DG++ V V AT
Sbjct: 325 RRIVSQLLTLMDGLKSRAHVIVMGAT 350
>sp|Q9SCN8|CD48D_ARATH Cell division control protein 48 homolog D OS=Arabidopsis thaliana
GN=CDC48D PE=1 SV=1
Length = 815
Score = 197 bits (501), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 138/422 (32%), Positives = 204/422 (48%), Gaps = 44/422 (10%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCC------SRLSLE 635
F + + P IL++GPPGSGKT +A+AVA F C S+L+ E
Sbjct: 234 FKSIGVKPPKGILLYGPPGSGKTLIARAVANE--------TGAFFFCINGPEIMSKLAGE 285
Query: 636 KGPIIRQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMD 695
+R+A EA +APSI+ D +DSI G + L+ +MD
Sbjct: 286 SESNLRKAFE----EAEKNAPSIIFIDEIDSIAPKREKTHGEVERR----IVSQLLTLMD 337
Query: 696 EYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQ 755
G K ++ + + + I +L GRFD + + P R +L I
Sbjct: 338 --GLKSRAH-----VIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLR--IH 388
Query: 756 RRSLECSDEILLDVASK-CDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPT 810
++++ ++++ L+ SK GY DL L + + D + I +
Sbjct: 389 TKNMKLAEDVDLERVSKDTHGYVGADLAALCTEAALQCIREKMDVIDLDDEEIDAEILNS 448
Query: 811 LV--RDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPN 868
+ D F A+ P A+R+ T E W+D+GGL +++ ++E ++ P + P
Sbjct: 449 MAVSNDHFQTALGNSNPSALRE---TVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPE 505
Query: 869 IFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRD 928
F + + VL YGPPGCGKT + A A C FIS+KGPELL + G SE VR+
Sbjct: 506 KFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRE 565
Query: 929 IFSKATAAAPCLLFFDEFDSIAPKRGH---DNTGVTDRVVNQFLTELDGVEVLTGVFVFA 985
IF KA +APC+LFFDE DSIA +RG+ D G DRV+NQ LTE+DG+ VF+
Sbjct: 566 IFDKARQSAPCVLFFDELDSIATQRGNSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIG 625
Query: 986 AT 987
AT
Sbjct: 626 AT 627
Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 85/146 (58%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DDVGG+ I+E++ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 206 GYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANE 265
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE DSIAPKR + V
Sbjct: 266 TGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVE 325
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAAT 987
R+V+Q LT +DG++ V V AT
Sbjct: 326 RRIVSQLLTLMDGLKSRAHVIVMGAT 351
>sp|Q5AWS6|CDC48_EMENI Cell division control protein 48 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=cdc48 PE=1 SV=2
Length = 823
Score = 196 bits (497), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 137/416 (32%), Positives = 209/416 (50%), Gaps = 31/416 (7%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + + P IL++GPPG+GKT +A+AVA L+ + S+++ E +R
Sbjct: 251 FKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIM--SKMAGESESNLR 308
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A EA ++P+I+ D +DSI G V L + +MD G K
Sbjct: 309 KAFE----EAEKNSPAIIFIDEIDSIAPKREKTNGEVERRVVSQL----LTLMD--GMKA 358
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
+S+ + +A+ I +L GRFD V + P + R IL I ++++
Sbjct: 359 RSN-----VVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEILS--IHTKNMKL 411
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 814
+++ L+ +A++ GY DL L + + + + + + +L +
Sbjct: 412 GEDVDLETIAAETHGYVGSDLASLCSEAAMQQIREKMDLIDLDEDTIDAEVLDSLGVTME 471
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
+F A+ P A+R++ R W+D+GGL +++ + E ++ P P F +
Sbjct: 472 NFRYALGVSNPSALREVAVVEVPNVR--WEDIGGLEEVKRELIESVQYPVDHPEKFQKFG 529
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
L VL YGPPG GKT + A A C+ FISVKGPELL+ + G SE +RDIF KA
Sbjct: 530 LSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGESESNIRDIFDKAR 589
Query: 935 AAAPCLLFFDEFDSIAPKRG---HDNTGVTDRVVNQFLTELDGVEVLTGVFVFAAT 987
AAAPC++F DE DSIA RG D G +DRVVNQ LTE+DG+ VFV AT
Sbjct: 590 AAAPCVVFLDELDSIAKSRGGSVGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGAT 645
Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 86/146 (58%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG I+E++ELP + P +F ++ +L+YGPPG GKT + A A
Sbjct: 223 GYDDIGGCRKQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANE 282
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A +P ++F DE DSIAPKR N V
Sbjct: 283 TGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVE 342
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAAT 987
RVV+Q LT +DG++ + V V AAT
Sbjct: 343 RRVVSQLLTLMDGMKARSNVVVMAAT 368
Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 97/233 (41%), Gaps = 31/233 (13%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII- 640
F + L +L +GPPG+GKT LAKAVA C + KGP +
Sbjct: 525 FQKFGLSPSRGVLFYGPPGTGKTMLAKAVANE--------------CAANFISVKGPELL 570
Query: 641 -------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDI 693
+ + +A AP +V D LDSI S G S + + L +
Sbjct: 571 SMWFGESESNIRDIFDKARAAAPCVVFLDELDSIAKSRGGSVGDAGGASDRVVNQLLTE- 629
Query: 694 MDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHE 753
MD K+ + + + E++ +L GR D V +P P + R+ IL+ +
Sbjct: 630 MDGMTSKKN-------VFVIGATNRPEQLDAALVRPGRLDTLVYVPLPDQASREGILKAQ 682
Query: 754 IQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKH 806
+ R++ SD + +ASK G+ DL + R V A+ + ++ +K
Sbjct: 683 L-RKTPVASDVDIEFIASKTHGFSGADLGFVTQRAVKLAIKESISAEIERQKQ 734
>sp|O60058|AFG2_SCHPO ATPase family gene 2 protein OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=afg2 PE=3 SV=1
Length = 809
Score = 195 bits (496), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 142/455 (31%), Positives = 213/455 (46%), Gaps = 44/455 (9%)
Query: 546 TQGFDSNVSSLSWM---GTTASDVINRIKVLLSPDSGLWFSTYHLPLPGHILIHGPPGSG 602
TQ FD S++++ G A R V L + F +++ P +L++GPPG+G
Sbjct: 266 TQNFDGPPSAVTFSSIGGLQAQIAQIRDIVELPFQNPELFKFFNIMPPRGVLLYGPPGTG 325
Query: 603 KTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII--------RQALSNFISEALDH 654
KT + +AVA VF GP + L +A H
Sbjct: 326 KTMVMRAVAAEANAQ-------VFTI-------DGPSVVGKYLGETESRLRKIFEDARAH 371
Query: 655 APSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGPIAFVA 714
PSI+ D +D++ ++ + S+ + +A L+D M G + +A
Sbjct: 372 QPSIIFIDEIDALAPKRTE-DVSEAESRAVATLLTLLDGM----------ANAGKVVVIA 420
Query: 715 SAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDVASKCD 774
+ I ++L GR + +++ P S R I++ + E +D L D+AS+
Sbjct: 421 ATNRPNSIDEALRRPGRLEKEIEIGIPDKSARLDIIKLLLSGVPNEINDAQLEDLASRTH 480
Query: 775 GYDAYDLEILVDRTVHAAVGRY--LHSDSSFEKHIKPTLVRDDFSQAMHEFLPVAMRDIT 832
Y DL +V A+ R L D+S I + DD A+ AMR+
Sbjct: 481 AYVGADLAAVVREAALRAIKRTISLQKDTS-GLDIFGAVQMDDLEFALSSVRQSAMREFM 539
Query: 833 KTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKT 892
E W D+GG +++ +KE +E P F++ +R VLLYGPPGC KT
Sbjct: 540 ---MESPNVHWSDIGGQEEVKQKLKESVEWPLTHGETFSRLGVRPPKGVLLYGPPGCSKT 596
Query: 893 HIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPK 952
A A L FI+VKGPEL +K++G SE+AVR +F KA A+P ++FFDE D++
Sbjct: 597 ITAKAIATETGLNFIAVKGPELFDKFVGESERAVRQVFQKARQASPSVIFFDEIDALTAN 656
Query: 953 RGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAAT 987
RG DN+ +DRVV L ELDG+E L V V AAT
Sbjct: 657 RGEDNS--SDRVVAALLNELDGIEALRNVLVLAAT 689
>sp|Q8SSJ5|CDC48_ENCCU Cell division control protein 48 OS=Encephalitozoon cuniculi
(strain GB-M1) GN=CDC48 PE=1 SV=1
Length = 780
Score = 195 bits (495), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 131/415 (31%), Positives = 215/415 (51%), Gaps = 31/415 (7%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
+S + P IL++GPPG+GKT +A+A+A L+ + S+++ E +R
Sbjct: 234 YSKIGVKPPKGILLYGPPGTGKTLIARAIANETGAFLFLINGPEIM--SKMAGESESNLR 291
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A EA ++P+I+ D +D++ E SQ +++ L +MD G K
Sbjct: 292 KAFE----EAEKNSPAIIFIDEIDALAPKR---EKSQGEVERRIVSQLLT-LMD--GMKA 341
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
+S+ + + + I +L GRFD +++ P + R IL I ++++
Sbjct: 342 RSN-----VIVLGATNRPNSIDPALRRYGRFDREIEIGVPDETGRLEILR--IHTKNMKM 394
Query: 762 SDEI-LLDVASKCDGYDAYDLEILVDRTVHAAVGRYL-HSDSSFEKHIKPTLVR-----D 814
S+++ L+ + + G+ DL L + L D EK L +
Sbjct: 395 SEDVDLVAINKELHGFTGSDLASLCSEAALQQIREKLPQIDLDSEKIDAKVLASLKVNSE 454
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
+F A+ P ++R+ T + W D+GGL ++ ++E ++ P ++P F +
Sbjct: 455 NFRYAIEHTDPSSLRE---TVIQSPNVKWSDIGGLEQVKQELRETVQYPVEYPEKFIKFG 511
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
+ VL YGPPGCGKT + A A C FIS+KGPELL+ ++G SE +RD+F++A
Sbjct: 512 MTPAKGVLFYGPPGCGKTLLAKAVATECKANFISIKGPELLSMWVGESESNIRDLFARAR 571
Query: 935 AAAPCLLFFDEFDSIAPKR-GHD-NTGVTDRVVNQFLTELDGVEVLTGVFVFAAT 987
AAPC+LFFDE DSIA R G+D ++G TDR++NQ L+E+DG+ VFV AT
Sbjct: 572 GAAPCVLFFDEIDSIAKARSGNDGSSGATDRMLNQLLSEMDGINQKKNVFVIGAT 626
Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 84/146 (57%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DDVGG I+E++ELP + ++++ ++ +LLYGPPG GKT I A A
Sbjct: 206 GYDDVGGCRAQMAKIRELVELPLRHSQLYSKIGVKPPKGILLYGPPGTGKTLIARAIANE 265
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
+ GPE+++K G SE +R F +A +P ++F DE D++APKR V
Sbjct: 266 TGAFLFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDALAPKREKSQGEVE 325
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAAT 987
R+V+Q LT +DG++ + V V AT
Sbjct: 326 RRIVSQLLTLMDGMKARSNVIVLGAT 351
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 34/210 (16%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII--------RQAL 644
+L +GPPG GKT LAKAVA C + KGP + +
Sbjct: 518 VLFYGPPGCGKTLLAKAVATE--------------CKANFISIKGPELLSMWVGESESNI 563
Query: 645 SNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSS 704
+ + A AP ++ FD +DSI + S +GS +T + L + L + MD +K+
Sbjct: 564 RDLFARARGAAPCVLFFDEIDSIAKARSGNDGSSGATDRM-LNQLLSE-MDGINQKKN-- 619
Query: 705 CGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDE 764
+ + + +++ +L GR D V +P P R +IL+ +++ L S E
Sbjct: 620 -----VFVIGATNRPDQLDSALMRPGRLDQLVYIPLPDLDSRVSILQATLKKTPL--SPE 672
Query: 765 I-LLDVASKCDGYDAYDLEILVDRTVHAAV 793
I L +A D + DL + R A+
Sbjct: 673 IDLRQLAEATDKFSGADLSEICQRACKLAI 702
>sp|Q96372|CDC48_CAPAN Cell division cycle protein 48 homolog OS=Capsicum annuum GN=CAFP
PE=2 SV=1
Length = 805
Score = 194 bits (494), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 139/422 (32%), Positives = 204/422 (48%), Gaps = 44/422 (10%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCC------SRLSLE 635
F + + P IL++GPPGSGKT +A+AVA F C S+L+ E
Sbjct: 234 FKSIGVKPPKGILLYGPPGSGKTLIARAVANE--------TGAFFFCINGPEIMSKLAGE 285
Query: 636 KGPIIRQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMD 695
+R+A EA +APSI+ D +DSI G V L + +MD
Sbjct: 286 SESNLRKAFE----EAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQL----LTLMD 337
Query: 696 EYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQ 755
G K ++ + + + I +L GRFD + + P R +L I
Sbjct: 338 --GLKSRAH-----VIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLG--IH 388
Query: 756 RRSLECSDEILLDVASK-CDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPT 810
++++ ++E+ L+ SK GY DL L + + D + + + +
Sbjct: 389 TKNMKLAEEVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVLDLEDDTIDAEVLNS 448
Query: 811 L--VRDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPN 868
+ + F A+ P A+R+ T E W+D+GGL +++ ++E ++ P + P
Sbjct: 449 MAVTNEHFQTALGTSNPSALRE---TVVEVPNVSWEDIGGLENVKRELQETVQYPVEPPE 505
Query: 869 IFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRD 928
F + + VL YGPPGCGKT + A A C FISVKGPELL + G SE VR+
Sbjct: 506 KFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRE 565
Query: 929 IFSKATAAAPCLLFFDEFDSIAPKRGH---DNTGVTDRVVNQFLTELDGVEVLTGVFVFA 985
IF KA +APC+LFFDE DSIA +RG D G DRV+NQ LTE+DG+ VF+
Sbjct: 566 IFDKARQSAPCVLFFDELDSIATQRGSSSGDAGGAADRVLNQLLTEMDGMNAKKTVFIIG 625
Query: 986 AT 987
AT
Sbjct: 626 AT 627
Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 85/146 (58%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DDVGG+ I+E++ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 206 GYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANE 265
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE DSIAPKR + V
Sbjct: 266 TGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVE 325
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAAT 987
R+V+Q LT +DG++ V V AT
Sbjct: 326 RRIVSQLLTLMDGLKSRAHVIVMGAT 351
>sp|Q54SY2|NVL_DICDI Putative ribosome biogenesis ATPase nvl OS=Dictyostelium discoideum
GN=nvl PE=3 SV=1
Length = 867
Score = 190 bits (482), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 143/473 (30%), Positives = 219/473 (46%), Gaps = 85/473 (17%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFIS 649
P IL+HGP G GKT LAKA+A L+ L A S +S E +R SN I+
Sbjct: 250 PRGILLHGPSGCGKTLLAKAIAGELKVP--LFAISATEITSGVSGESEARVRTLFSNAIA 307
Query: 650 EALDHAPSIVIFDNLDSII----SSSSDPE----------------------GSQPSTSV 683
+A P I+ D +D+I S+S D E ++P+
Sbjct: 308 QA----PCIIFIDEIDAIAPKRESASKDMERRIVSQLLTCMDSLNYLSSNNSTNEPNEQT 363
Query: 684 IALTKFLVDIMDEYGEKRKSSCGI-------------GPIAFVASAQSLEKIPQSLTSSG 730
+ DI++ + ++ G + + + E + +L G
Sbjct: 364 EQQQQQQQDIIEVDSQATTTTTASNNNNKQQKNDFKKGHVIVIGATNRPESLDTALRIGG 423
Query: 731 RFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVH 790
RFD + L P + R IL+ + LE + + ++A+ GY D+ +LV
Sbjct: 424 RFDKEICLGIPDQTARCKILKVITSKMRLENNFD-YEEIATLTPGYVGADINLLVKEAAT 482
Query: 791 AAVGRYLHSDSS---------------------------FEKHIKPTLVRD------DFS 817
+V R S+ + ++ ++P + DF
Sbjct: 483 NSVNRIFTSNLNGASSSSSSSSSSTTNINNIGLSTELLISKEPLEPEKLNSLYIEMIDFK 542
Query: 818 QAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRL 877
+A+ + +P A R+ T WDDVG L+ ++ + I P ++P + +
Sbjct: 543 KALKKVVPAAKREGFATIP---NVTWDDVGALSGVREELTNSILRPIRYPKKYKNMGIDS 599
Query: 878 RSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAA 937
+ VL+YGPPGCGKT + A A+ C FISVKGPELLNKY+G SE+AVR +F +A A++
Sbjct: 600 PAGVLMYGPPGCGKTLLAKAIASECQANFISVKGPELLNKYVGESERAVRQVFQRAAASS 659
Query: 938 PCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAAT 987
PC++FFDEFD++APKR T+RVVNQ LTE+DG+E + VF+ AAT
Sbjct: 660 PCVIFFDEFDALAPKRGGGDGGGNQATERVVNQLLTEMDGLEKRSEVFIIAAT 712
Score = 97.1 bits (240), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 76/137 (55%)
Query: 843 WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 902
+ ++GG+ I+E IE P P I++ + +LL+GP GCGKT + A A
Sbjct: 215 FSNLGGVESCLRDIREHIEYPICHPEIYSHLGVEPPRGILLHGPSGCGKTLLAKAIAGEL 274
Query: 903 SLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD 962
+ ++ E+ + G SE VR +FS A A APC++F DE D+IAPKR + +
Sbjct: 275 KVPLFAISATEITSGVSGESEARVRTLFSNAIAQAPCIIFIDEIDAIAPKRESASKDMER 334
Query: 963 RVVNQFLTELDGVEVLT 979
R+V+Q LT +D + L+
Sbjct: 335 RIVSQLLTCMDSLNYLS 351
Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 110/251 (43%), Gaps = 39/251 (15%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII--------R 641
P +L++GPPG GKT LAKA+A + A+ + V KGP +
Sbjct: 600 PAGVLMYGPPGCGKTLLAKAIASECQ------ANFISV--------KGPELLNKYVGESE 645
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A+ A +P ++ FD D++ +G + + + L + MD G ++
Sbjct: 646 RAVRQVFQRAAASSPCVIFFDEFDALAPKRGGGDGGGNQATERVVNQLLTE-MD--GLEK 702
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
+S + +A+ + I ++ GR D V +P P+ ER IL+ + +
Sbjct: 703 RSE-----VFIIAATNRPDIIDAAMCRPGRLDKMVYVPLPSPEERCEILKTLTHKIPIH- 756
Query: 762 SDEILLDVAS--KCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKP-TLVRDDFSQ 818
D L+ V + +C + DL +LV + A+ R ++S+ +P T+ +DF
Sbjct: 757 QDVDLIKVGTDLRCHSFSGADLSLLVKEAANHAISRGFDNNST-----EPDTVTMEDFIF 811
Query: 819 AMHEFLPVAMR 829
A+ + P R
Sbjct: 812 ALSKIKPSVSR 822
>sp|Q13608|PEX6_HUMAN Peroxisome assembly factor 2 OS=Homo sapiens GN=PEX6 PE=1 SV=2
Length = 980
Score = 189 bits (480), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 152/452 (33%), Positives = 224/452 (49%), Gaps = 52/452 (11%)
Query: 554 SSLSWMGTTA--SDVINRIKVLLSPDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVA 611
SSLS G A S++ +K L P L T +L+ GPPG GKT++ VA
Sbjct: 431 SSLSPPGLEALVSELCAVLKPRLQPGGALLTGTSS------VLLRGPPGCGKTTV---VA 481
Query: 612 KSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEALDHAPSIVIFDNLDSIISSS 671
+ H L H++ V CS L E + L S A P++++ +D +
Sbjct: 482 AACSH---LGLHLLKVPCSSLCAESSGAVETKLQAIFSRARRCRPAVLLLTAVDLL---G 535
Query: 672 SDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGR 731
D +G V+A+ + L+ E +SC P+ VA+ + +P + ++
Sbjct: 536 RDRDGLGEDARVMAVLRHLL-----LNEDPLNSCP--PLMVVATTSRAQDLPADVQTA-- 586
Query: 732 FDFHVQLPAPAASERKAILEHEIQRRSLECSDEI-LLDVASKCDGYDAYDLEILVDRTVH 790
F +++PA + +R +IL L E+ L +A +C G+ DL L+ +
Sbjct: 587 FPHELEVPALSEGQRLSILRALTAH--LPLGQEVNLAQLARRCAGFVVGDLYALLTHSSR 644
Query: 791 AAVGRYLHS---------DSSFEKHIKPTLVRDDFSQAMHEFLPVAMRDITKTSAEGGRS 841
AA R +S D L+ +DF QA+ + + A G
Sbjct: 645 AACTRIKNSGLAGGLTEEDEGELCAAGFPLLAEDFGQALEQL------QTAHSQAVGAPK 698
Query: 842 ----GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGA 897
W DVGGL +++ I E I+LP + P + + RS +LL+GPPG GKT + A
Sbjct: 699 IPSVSWHDVGGLQEVKKEILETIQLPLEHPELLSLG--LRRSGLLLHGPPGTGKTLLAKA 756
Query: 898 AAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGH-- 955
A CSL F+SVKGPEL+N Y+G SE+ VR++F++A AAAPC++FFDE DS+AP RG
Sbjct: 757 VATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSG 816
Query: 956 DNTGVTDRVVNQFLTELDGVEVLTGVFVFAAT 987
D+ GV DRVV+Q L ELDG+ VFV AT
Sbjct: 817 DSGGVMDRVVSQLLAELDGLHSTQDVFVIGAT 848
>sp|Q99LC9|PEX6_MOUSE Peroxisome assembly factor 2 OS=Mus musculus GN=Pex6 PE=2 SV=1
Length = 981
Score = 187 bits (476), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 139/411 (33%), Positives = 207/411 (50%), Gaps = 44/411 (10%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEAL 652
+L+ GPPGSGKT+ A L H++ V CS L + + L S A
Sbjct: 467 VLLQGPPGSGKTTAVTAACSRLG------LHLLKVPCSSLCADSSRAVETKLQATFSRAR 520
Query: 653 DHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGPIAF 712
P++++ +D + D +G V A + L ++DE R P+
Sbjct: 521 RCRPAVLLLTAVDLL---GRDRDGLGEDARVAATLRHL--LLDEDALSR-----CPPLMV 570
Query: 713 VASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEI-LLDVAS 771
VA+ ++ +P + ++ F +++P + ++R +IL+ L E+ L +A
Sbjct: 571 VATTSRVQDLPTDVQTA--FPHELEVPVLSEAQRLSILQALTAH--LPLGQEVNLPQLAR 626
Query: 772 KCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKP---------TLVRDDFSQAMHE 822
+C G+ DL L+ T AA R S S+ + L+ +DF QA+ +
Sbjct: 627 RCAGFVVGDLYALLTHTCRAACTRIRASGSAGGLSEEDEGDLCVAGFPLLAEDFGQALDQ 686
Query: 823 FLPVAMRDITKTSAEGGRS----GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLR 878
+ A G W DVGGL D++ I E I+LP + P + + R
Sbjct: 687 L------QTAHSQAVGAPRIPSVSWHDVGGLQDVKKEILETIQLPLEHPELLSLG--LRR 738
Query: 879 SNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAP 938
S +LL+GPPG GKT + A A CSL F+SVKGPEL+N Y+G SE+ VR++F++A AAAP
Sbjct: 739 SGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAP 798
Query: 939 CLLFFDEFDSIAPKRGH--DNTGVTDRVVNQFLTELDGVEVLTGVFVFAAT 987
C++FFDE DS+AP RG D+ GV DRVV+Q L ELDG+ VFV AT
Sbjct: 799 CIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGAT 849
Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 46/112 (41%), Gaps = 5/112 (4%)
Query: 879 SNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAP 938
S VLL GPPG GKT V AA + L + V L A E ++ FS+A P
Sbjct: 465 SCVLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRAVETKLQATFSRARRCRP 524
Query: 939 CLLFFDEFDSIAPKRGHDNTGVTDRV---VNQFLTELDGVEVLTGVFVFAAT 987
+L D + R D G RV + L + D + + V A T
Sbjct: 525 AVLLLTAVDLLG--RDRDGLGEDARVAATLRHLLLDEDALSRCPPLMVVATT 574
>sp|Q9P3A7|CDC48_SCHPO Cell division cycle protein 48 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=cdc48 PE=1 SV=2
Length = 815
Score = 187 bits (475), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 139/415 (33%), Positives = 209/415 (50%), Gaps = 31/415 (7%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + + P IL++GPPG+GKT +A+AVA L+ + S+++ E +R
Sbjct: 250 FKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIM--SKMAGESESNLR 307
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A EA ++P+I+ D +DSI G V L + +MD G K
Sbjct: 308 KAFE----EAEKNSPAIIFIDEIDSIAPKREKTNGEVERRVVSQL----LTLMD--GMKA 357
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
+S+ + +A+ I +L GRFD V + P + R IL I ++++
Sbjct: 358 RSN-----VVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPTGRLEILR--IHTKNMKL 410
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLV------RD 814
+D++ L+ +A++ GY DL L + + E I ++ D
Sbjct: 411 ADDVDLEQIAAETHGYVGSDLASLCSEAAMQQIREKMDMIDLDEDEIDAEVLDSLGVTMD 470
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
+F A+ P A+R+ T E W+D+GGL +++ ++E +++P + F +
Sbjct: 471 NFRFALGSSNPSALRE---TVVEVPNVRWEDIGGLEEVKRELRETVQMPVMYAEKFLRFG 527
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
+ VL +GPPG GKT + A A CS FISVKGPELL+ + G SE VRDIF KA
Sbjct: 528 VTPSKGVLFFGPPGTGKTLLAKAIANECSANFISVKGPELLSMWFGESESNVRDIFDKAR 587
Query: 935 AAAPCLLFFDEFDSIAPKR--GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAAT 987
AAAPC++F DE DSIA R ++G DRVVNQ LTE+DGV VFV AT
Sbjct: 588 AAAPCVVFLDELDSIAKARGASAGDSGGGDRVVNQLLTEMDGVNSKKNVFVIGAT 642
Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 86/146 (58%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG I+E++ELP + P +F ++ +L+YGPPG GKT + A A
Sbjct: 222 GYDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANE 281
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A +P ++F DE DSIAPKR N V
Sbjct: 282 TGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVE 341
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAAT 987
RVV+Q LT +DG++ + V V AAT
Sbjct: 342 RRVVSQLLTLMDGMKARSNVVVMAAT 367
Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 86/216 (39%), Gaps = 32/216 (14%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII--------RQAL 644
+L GPPG+GKT LAKA+A C + KGP + +
Sbjct: 534 VLFFGPPGTGKTLLAKAIANE--------------CSANFISVKGPELLSMWFGESESNV 579
Query: 645 SNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSS 704
+ +A AP +V D LDSI + + S + L+ MD K+
Sbjct: 580 RDIFDKARAAAPCVVFLDELDSIAKARG--ASAGDSGGGDRVVNQLLTEMDGVNSKKN-- 635
Query: 705 CGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDE 764
+ + + ++I +L GR D + +P P R +IL+ ++ R + D
Sbjct: 636 -----VFVIGATNRPDQIDPALMRPGRLDQLIYVPLPDEEARFSILQTQL-RHTPVAEDV 689
Query: 765 ILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSD 800
L VA G+ DLE +V R V A+ + D
Sbjct: 690 DLRAVAKATHGFSGADLEFVVQRAVKLAIKDSIEED 725
>sp|P54811|TERA1_CAEEL Transitional endoplasmic reticulum ATPase homolog 1
OS=Caenorhabditis elegans GN=cdc-48.1 PE=1 SV=1
Length = 809
Score = 187 bits (474), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 134/417 (32%), Positives = 207/417 (49%), Gaps = 33/417 (7%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + P IL+ GPPG+GKT +A+AVA L+ + S++S E +R
Sbjct: 236 FKAIGIKPPRGILLFGPPGTGKTLIARAVANETGSFFFLINGPEVM--SKMSGESESNLR 293
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A E + P+I+ D +D+I G V L + +MD G K
Sbjct: 294 KAFE----ECEKNQPAILFIDEIDAIAPKREKTNGEVERRIVSQL----LTLMD--GVKG 343
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
+S+ + +A+ I +L GRFD + + P A R IL I ++++
Sbjct: 344 RSN-----LVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILR--IHTKNMKL 396
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 814
+D++ L+ +A++C G+ DL L + + D + + +L +
Sbjct: 397 ADDVDLEQIANECHGFVGADLASLCSEAALQQIREKMELIDLEDDQIDAEVLNSLAVTME 456
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
+F A + P A+R+ E + W D+GGL +++ ++E+++ P + P + +
Sbjct: 457 NFRFAQGKSSPSALREAV---VETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFG 513
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
++ VL YGPPGCGKT + A A C FIS+KGPELL + G SE VRD+F KA
Sbjct: 514 MQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKAR 573
Query: 935 AAAPCLLFFDEFDSI----APKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAAT 987
AAAPC+LFFDE DSI G D G +DRV+NQ LTE+DG+ VF+ AT
Sbjct: 574 AAAPCVLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGAT 630
Score = 120 bits (301), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 85/146 (58%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG+ IKEM+ELP + P +F ++ +LL+GPPG GKT I A A
Sbjct: 208 GYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVANE 267
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F + P +LF DE D+IAPKR N V
Sbjct: 268 TGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKREKTNGEVE 327
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAAT 987
R+V+Q LT +DGV+ + + V AAT
Sbjct: 328 RRIVSQLLTLMDGVKGRSNLVVIAAT 353
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 85/222 (38%), Gaps = 30/222 (13%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII--------RQAL 644
+L +GPPG GKT LAKA+A C + KGP + +
Sbjct: 520 VLFYGPPGCGKTLLAKAIANE--------------CQANFISIKGPELLTMWFGESEANV 565
Query: 645 SNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSS 704
+ +A AP ++ FD LDSI + G + + ++ MD K+
Sbjct: 566 RDVFDKARAAAPCVLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKKN-- 623
Query: 705 CGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDE 764
+ + + + I ++ GR D + +P P + R IL+ +++ L D
Sbjct: 624 -----VFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRHQILKASLRKTPL-SKDL 677
Query: 765 ILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKH 806
L +A G+ DL + R A+ + + EK
Sbjct: 678 DLTFLAKNTVGFSGADLTEICQRACKLAIRESIEKEIRIEKE 719
>sp|P54609|CD48A_ARATH Cell division control protein 48 homolog A OS=Arabidopsis thaliana
GN=CDC48A PE=1 SV=1
Length = 809
Score = 185 bits (469), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 139/423 (32%), Positives = 204/423 (48%), Gaps = 45/423 (10%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCC------SRLSLE 635
F + + P IL++GPPGSGKT +A+AVA F C S+L+ E
Sbjct: 233 FKSIGVKPPKGILLYGPPGSGKTLIARAVANE--------TGAFFFCINGPEIMSKLAGE 284
Query: 636 KGPIIRQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMD 695
+R+A EA +APSI+ D +DSI G + L+ +MD
Sbjct: 285 SESNLRKAFE----EAEKNAPSIIFIDEIDSIAPKREKTNGEVERR----IVSQLLTLMD 336
Query: 696 EYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQ 755
G K ++ + + + I +L GRFD + + P R +L I
Sbjct: 337 --GLKSRAH-----VIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLR--IH 387
Query: 756 RRSLECSDEILLDVASK-CDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPT 810
++++ ++++ L+ SK GY DL L + + D S + I +
Sbjct: 388 TKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDDSIDAEILNS 447
Query: 811 L--VRDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPN 868
+ + F A+ P A+R+ T E W+D+GGL +++ ++E ++ P + P
Sbjct: 448 MAVTNEHFHTALGNSNPSALRE---TVVEVPNVSWNDIGGLENVKRELQETVQYPVEHPE 504
Query: 869 IFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRD 928
F + + VL YGPPGCGKT + A A C FISVKGPELL + G SE VR+
Sbjct: 505 KFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRE 564
Query: 929 IFSKATAAAPCLLFFDEFDSIAPKR----GHDNTGVTDRVVNQFLTELDGVEVLTGVFVF 984
IF KA +APC+LFFDE DSIA +R G D G DRV+NQ LTE+DG+ VF+
Sbjct: 565 IFDKARQSAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFII 624
Query: 985 AAT 987
AT
Sbjct: 625 GAT 627
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 85/146 (58%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DDVGG+ I+E++ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 205 GYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANE 264
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE DSIAPKR N V
Sbjct: 265 TGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVE 324
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAAT 987
R+V+Q LT +DG++ V V AT
Sbjct: 325 RRIVSQLLTLMDGLKSRAHVIVMGAT 350
>sp|Q8RY16|PEX6_ARATH Peroxisome biogenesis protein 6 OS=Arabidopsis thaliana GN=PEX6
PE=1 SV=1
Length = 941
Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 150/451 (33%), Positives = 223/451 (49%), Gaps = 54/451 (11%)
Query: 565 DVINRIKVLLSPDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHI 624
+ +N + +LSP L S L +L+HG PG GK ++ K VA+ L H+
Sbjct: 354 ETVNILASVLSPP--LCPSALASKLRVAVLLHGIPGCGKRTVVKYVARRLG------LHV 405
Query: 625 VFVCCSRLSLEKGPIIRQALSNFISEALDHAPSIV------IFDNLDSIISSSSDPEG-S 677
V C L AL+ + A ++P+I+ +F NL S S D G S
Sbjct: 406 VEFSCHSLLASSERKTSTALAQTFNMARRYSPTILLLRHFDVFKNLGSQDGSLGDRVGVS 465
Query: 678 QPSTSVI-ALTKFLVD---IMDEYGEKRKSSCGIGP-----IAFVASAQSLEKIPQSLTS 728
SVI LT+ + + M+E S +G + +ASA+S E I ++
Sbjct: 466 FEIASVIRELTEPVSNGDSSMEEKSNSNFSENEVGKFRGHQVLLIASAESTEGISPTIRR 525
Query: 729 SGRFDFHVQLPAPAASERKAILEHEIQRRSL---ECSDEILLDVASKCDGYDAYDLEILV 785
F +++ + +R +L +Q S SDE + + + G+ DL+ LV
Sbjct: 526 C--FSHEIRMGSLNDEQRSEMLSQSLQGVSQFLNISSDEFMKGLVGQTSGFLPRDLQALV 583
Query: 786 -DRTVHAAV-----------------GRYLHSDSSFEKHIKPTLVRDDFSQAMHEFLPVA 827
D + + G +H S + + ++DF++A+
Sbjct: 584 ADAGANLYISQESETKKINSLSDDLHGVDIHQASQIDNSTEKLTAKEDFTKALDR---SK 640
Query: 828 MRDITKTSA-EGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGP 886
R+ + A + WDDVGGL D++ +I + ++LP ++F+ LR RS VLLYGP
Sbjct: 641 KRNASALGAPKVPNVKWDDVGGLEDVKTSILDTVQLPLLHKDLFSSG-LRKRSGVLLYGP 699
Query: 887 PGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEF 946
PG GKT + A A CSL F+SVKGPEL+N YIG SE+ VRDIF KA +A PC++FFDE
Sbjct: 700 PGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFEKARSARPCVIFFDEL 759
Query: 947 DSIAPKRGH--DNTGVTDRVVNQFLTELDGV 975
DS+AP RG D+ GV DRVV+Q L E+DG+
Sbjct: 760 DSLAPARGASGDSGGVMDRVVSQMLAEIDGL 790
>sp|Q9DBY8|NVL_MOUSE Nuclear valosin-containing protein-like OS=Mus musculus GN=Nvl PE=1
SV=1
Length = 855
Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 142/442 (32%), Positives = 202/442 (45%), Gaps = 59/442 (13%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFIS 649
P +L+HGPPG GKT LA A+A L+ VA V S +S E Q L
Sbjct: 297 PRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIV--SGVSGES----EQKLRELFD 350
Query: 650 EALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGP 709
+A+ +AP IV D +D+I V L + D+ + R
Sbjct: 351 QAVSNAPCIVFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATAR-------- 402
Query: 710 IAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDV 769
+ + + + + +L +GRFD V L P + R+ IL+ ++ L + +
Sbjct: 403 VLVIGATNRPDSLDPALRRAGRFDREVCLGIPDEAARERILQTLCRKLRLPETFN-FCHL 461
Query: 770 ASKCDGYDAYDLEILVDRTVHAAVGRYLH----------------SDSSFEKHI--KPT- 810
A G+ DL L AV R L S+ E+ + +PT
Sbjct: 462 AHLTPGFVGADLMALCREAAMCAVNRVLMKQQAQQKKKPEIEGLPSEGDQEERLGAEPTS 521
Query: 811 -----------LVRDD--FSQAMHEFLPVAMRDITKTSAE----GGRSG--------WDD 845
L+RD S+ + L + + D AE R G W D
Sbjct: 522 ETQDELQRLLGLLRDQDPLSEEQMQGLCIELNDFIVALAEVQPSAKREGFVTVPNVTWAD 581
Query: 846 VGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLR 905
+G L DI++ + I P + P+ F L + +LL GPPGCGKT + A A L
Sbjct: 582 IGALEDIRDELIMAILAPVRNPDQFRTLGLGTPAGILLAGPPGCGKTLLAKAVANESGLN 641
Query: 906 FISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVV 965
FISVKGPELLN Y+G SE+AVR +F +A +APC++FFDE D++ P+R TG + RVV
Sbjct: 642 FISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASVRVV 701
Query: 966 NQFLTELDGVEVLTGVFVFAAT 987
NQ LTE+DG+E VF+ AAT
Sbjct: 702 NQLLTEMDGLETRQQVFILAAT 723
Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 6/149 (4%)
Query: 843 WDDVGGL-TDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
++DVGG ++ K +I + + P ++ + VLL+GPPGCGKT + A A
Sbjct: 263 FEDVGGNDATLKEVCKMLIHM--RHPEVYQHLGVVPPRGVLLHGPPGCGKTLLAHAIAGE 320
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
L + V PE+++ G SEQ +R++F +A + APC++F DE D+I PKR + +
Sbjct: 321 LDLPILKVAAPEIVSGVSGESEQKLRELFDQAVSNAPCIVFIDEIDAITPKREVASKDME 380
Query: 962 DRVVNQFLT---ELDGVEVLTGVFVFAAT 987
R+V Q LT +L+ V V V AT
Sbjct: 381 RRIVAQLLTCMDDLNNVAATARVLVIGAT 409
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 137/324 (42%), Gaps = 65/324 (20%)
Query: 535 VSFYTVKERGSTQGFDSNVSSLSWMGTTASDVINR--IKVLLSP-DSGLWFSTYHLPLPG 591
V+ V+ +GF V +++W A + I I +L+P + F T L P
Sbjct: 557 VALAEVQPSAKREGF-VTVPNVTWADIGALEDIRDELIMAILAPVRNPDQFRTLGLGTPA 615
Query: 592 HILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII--------RQA 643
IL+ GPPG GKT LAKAVA + + F+ KGP + +A
Sbjct: 616 GILLAGPPGCGKTLLAKAVANE--------SGLNFISV------KGPELLNMYVGESERA 661
Query: 644 LSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKS 703
+ A + AP ++ FD +D++ SD E SV + + L + MD +++
Sbjct: 662 VRQVFQRAKNSAPCVIFFDEVDALCPRRSDRET---GASVRVVNQLLTE-MDGLETRQQ- 716
Query: 704 SCGIGPIAFVASAQSLEKIPQSLTSSGRFD--FHVQLPAPAASERKAILEHEIQRRSLEC 761
+ +A+ + I ++ GR D V LP PA +R AIL+ + +
Sbjct: 717 ------VFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPA--DRVAILKTITKNGTKPP 768
Query: 762 SDE-ILLDVAS---KCDGYDAYDLEILVDRTVHAAVGRYL-----------------HSD 800
DE + L+ + +C+ Y DL LV A+ + + H +
Sbjct: 769 LDEDVNLETIANDLRCNCYTGADLTALVREASLCALRQEITAQKNGVGAGELKVSHKHFE 828
Query: 801 SSFEKHIKPTLVRDDFSQAMHEFL 824
+F+K +KP++ D Q M+E L
Sbjct: 829 DAFKK-VKPSISIKD--QVMYEAL 849
>sp|Q9SS94|CD48C_ARATH Cell division control protein 48 homolog C OS=Arabidopsis thaliana
GN=CDC48C PE=2 SV=2
Length = 820
Score = 184 bits (466), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 143/434 (32%), Positives = 201/434 (46%), Gaps = 35/434 (8%)
Query: 573 LLSPDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRL 632
+L+P+ F + P IL HGPPG GKT LA A+A A + F S
Sbjct: 253 ILNPEP---FKKIGVKPPSGILFHGPPGCGKTKLANAIANE--------AGVPFYKISAT 301
Query: 633 SLEKG--PIIRQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFL 690
+ G + + S+A APSIV D +D+I S E Q +T+ L
Sbjct: 302 EVISGVSGASEENIRELFSKAYRTAPSIVFIDEIDAI---GSKRENQQREMEKRIVTQLL 358
Query: 691 --VDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKA 748
+D G+K G + + + + + +L SGRF+ + L AP R
Sbjct: 359 TCMDGPGNKGDKNAPDSSAGFVLVIGATNRPDALDPALRRSGRFETEIALTAPDEDARAE 418
Query: 749 ILEHEIQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYL---HSDSSFEK 805
IL Q+ LE + +A G+ DLE + A+ R L S+ S +
Sbjct: 419 ILSVVAQKLRLEGPFDKKR-IARLTPGFVGADLESVAYLAGRKAIKRILDSRKSEQSGDG 477
Query: 806 HIKPTLVRDDFSQAMHEFLPVAMRD----ITKTSAEGGRSG--------WDDVGGLTDIQ 853
+ +R + + E L V M D + A R G WDDVGGL ++
Sbjct: 478 EDDKSWLRMPWPEEELEKLFVKMSDFEEAVNLVQASLTREGFSIVPDVKWDDVGGLDHLR 537
Query: 854 NAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPE 913
I P K P+I+ + L + LLYGPPGCGKT I AAA F+ +KG E
Sbjct: 538 LQFNRYIVRPIKKPDIYKAFGVDLETGFLLYGPPGCGKTLIAKAAANEAGANFMHIKGAE 597
Query: 914 LLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELD 973
LLNKY+G SE A+R +F +A APC++FFDE D++ RG + V +R++NQFL ELD
Sbjct: 598 LLNKYVGESELAIRTLFQRARTCAPCVIFFDEVDALTTSRGKEGAWVVERLLNQFLVELD 657
Query: 974 GVEVLTGVFVFAAT 987
G E V+V AT
Sbjct: 658 GGE-RRNVYVIGAT 670
Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 74/132 (56%)
Query: 843 WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 902
+ D GG+ I + ++ + P P F + ++ S +L +GPPGCGKT + A A
Sbjct: 232 FKDFGGIKKILDELEMNVLFPILNPEPFKKIGVKPPSGILFHGPPGCGKTKLANAIANEA 291
Query: 903 SLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD 962
+ F + E+++ GASE+ +R++FSKA AP ++F DE D+I KR + +
Sbjct: 292 GVPFYKISATEVISGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIGSKRENQQREMEK 351
Query: 963 RVVNQFLTELDG 974
R+V Q LT +DG
Sbjct: 352 RIVTQLLTCMDG 363
Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 107/242 (44%), Gaps = 29/242 (11%)
Query: 570 IKVLLSPDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAK----SLEHHKDLVAHIV 625
++ + PD + + + L L++GPPG GKT +AKA A + H K
Sbjct: 545 VRPIKKPD---IYKAFGVDLETGFLLYGPPGCGKTLIAKAAANEAGANFMHIKGAELLNK 601
Query: 626 FVCCSRLSLEKGPIIRQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIA 685
+V S L A+ A AP ++ FD +D++ +S EG+ +
Sbjct: 602 YVGESEL----------AIRTLFQRARTCAPCVIFFDEVDALTTSRGK-EGAWVVERL-- 648
Query: 686 LTKFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASE 745
L +FLV++ + GE+R + + + + + + GRF + +P P A E
Sbjct: 649 LNQFLVEL--DGGERRN-------VYVIGATNRPDVVDPAFLRPGRFGNLLYVPLPNADE 699
Query: 746 RKAILEHEIQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEK 805
R +IL+ +++ ++ S ++ + C+G+ DL LV + AV + S S E
Sbjct: 700 RASILKAIARKKPIDPSVDLDGIAKNNCEGFSGADLAHLVQKATFQAVEEMIGSSESSED 759
Query: 806 HI 807
+
Sbjct: 760 DV 761
>sp|O15381|NVL_HUMAN Nuclear valosin-containing protein-like OS=Homo sapiens GN=NVL PE=1
SV=1
Length = 856
Score = 184 bits (466), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 138/442 (31%), Positives = 199/442 (45%), Gaps = 59/442 (13%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFIS 649
P +L+HGPPG GKT LA A+A L+ VA V S +S E Q L
Sbjct: 298 PRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIV--SGVSGES----EQKLRELFE 351
Query: 650 EALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGP 709
+A+ +AP I+ D +D+I V L + D+ + R
Sbjct: 352 QAVSNAPCIIFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATAR-------- 403
Query: 710 IAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDV 769
+ + + + + +L +GRFD + L P + R+ IL+ ++ L + + +
Sbjct: 404 VLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKLRLPQAFD-FCHL 462
Query: 770 ASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKH------------------IKPT- 810
A G+ DL L AV R L +K +PT
Sbjct: 463 AHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQQKKNPEMEDLPSKGVQEERLGTEPTS 522
Query: 811 -----------LVRDD--FSQAMHEFLPVAMRD----ITKTSAEGGRSG--------WDD 845
L+RD S+ + L + + D ++ R G W D
Sbjct: 523 ETQDELQRLLGLLRDQDPLSEEQMQGLCIELNDFIVALSSVQPSAKREGFVTVPNVTWAD 582
Query: 846 VGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLR 905
+G L DI+ + I P + P+ F L + VLL GPPGCGKT + A A L
Sbjct: 583 IGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLN 642
Query: 906 FISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVV 965
FISVKGPELLN Y+G SE+AVR +F +A +APC++FFDE D++ P+R TG + RVV
Sbjct: 643 FISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASVRVV 702
Query: 966 NQFLTELDGVEVLTGVFVFAAT 987
NQ LTE+DG+E VF+ AAT
Sbjct: 703 NQLLTEMDGLEARQQVFIMAAT 724
Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 84/150 (56%), Gaps = 8/150 (5%)
Query: 843 WDDVGG--LTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAA 900
++DVGG +T ++ K +I + + P ++ + VLL+GPPGCGKT + A A
Sbjct: 264 FEDVGGNDMT-LKEVCKMLIHM--RHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAG 320
Query: 901 ACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGV 960
L + V PE+++ G SEQ +R++F +A + APC++F DE D+I PKR + +
Sbjct: 321 ELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKREVASKDM 380
Query: 961 TDRVVNQFLT---ELDGVEVLTGVFVFAAT 987
R+V Q LT +L+ V V V AT
Sbjct: 381 ERRIVAQLLTCMDDLNNVAATARVLVIGAT 410
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 114/268 (42%), Gaps = 45/268 (16%)
Query: 535 VSFYTVKERGSTQGFDSNVSSLSWMGTTASDVINR---IKVLLSPDSGLWFSTYHLPLPG 591
V+ +V+ +GF V +++W A + I + +L + F L P
Sbjct: 558 VALSSVQPSAKREGF-VTVPNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPA 616
Query: 592 HILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII--------RQA 643
+L+ GPPG GKT LAKAVA + + F+ KGP + +A
Sbjct: 617 GVLLAGPPGCGKTLLAKAVANE--------SGLNFISV------KGPELLNMYVGESERA 662
Query: 644 LSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKS 703
+ A + AP ++ FD +D++ SD E SV + + L + MD +++
Sbjct: 663 VRQVFQRAKNSAPCVIFFDEVDALCPRRSDRET---GASVRVVNQLLTE-MDGLEARQQ- 717
Query: 704 SCGIGPIAFVASAQSLEKIPQSLTSSGRFD--FHVQLPAPAASERKAILEHEIQRRSLEC 761
+ +A+ + I ++ GR D V LP PA +R AIL+ + +
Sbjct: 718 ------VFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPA--DRLAILKTITKNGTKPP 769
Query: 762 SD-EILLDVAS---KCDGYDAYDLEILV 785
D ++ L+ + +CD Y DL LV
Sbjct: 770 LDADVNLEAIAGDLRCDCYTGADLSALV 797
>sp|Q9HG03|PEX6_PENCH Peroxisomal biogenesis factor 6 OS=Penicillium chrysogenum GN=pex6
PE=3 SV=1
Length = 1459
Score = 182 bits (463), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 125/324 (38%), Positives = 172/324 (53%), Gaps = 37/324 (11%)
Query: 713 VASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEI-LLDVAS 771
+A+ +E IP+ + S +F ++ AP ER+ IL++ + R + S ++ L +A
Sbjct: 886 IATTTDVETIPEGIRSLITHEF--EMGAPEEKEREGILQNAVTERGIRLSADVDLGSIAL 943
Query: 772 KCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPT--LVRDDFSQAMHEFLPVAMR 829
K A DL +V+R A R L S + K I + VRD R
Sbjct: 944 KTAALVAGDLVDVVERAAGARTAR-LESLAEASKKISGSEVFVRDVLLAGGD-----GAR 997
Query: 830 DITKT----SAEGGRS--------------GWDDVGGLTDIQNAIKEMIELPSKFPNIFA 871
+TK + E R GWDDVGGLT++++A+ E I+LP + P +FA
Sbjct: 998 GVTKADFDAAVEAARKNFADSIGAPKIPNVGWDDVGGLTNVKDALVETIQLPLERPELFA 1057
Query: 872 QAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFS 931
+ ++ RS +L YGPPG GKT + A A SL F SVKGPELLN YIG SE VR +F
Sbjct: 1058 KG-MKKRSGILFYGPPGTGKTLLAKAIATEFSLNFFSVKGPELLNMYIGESEANVRRVFQ 1116
Query: 932 KATAAAPCLLFFDEFDSIAPKRGH--DNTGVTDRVVNQFLTELDGV----EVLTGVFVFA 985
+A A PC++FFDE DS+APKRG+ D+ GV DR+V+Q L ELDG+ E GVFV
Sbjct: 1117 RARDARPCVVFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMNGGEENSGGVFVIG 1176
Query: 986 AT-RLEFFHYNVLLFCSFIIFLIL 1008
AT R + +L F L L
Sbjct: 1177 ATNRPDLLDTALLRPGRFDKMLYL 1200
Score = 41.6 bits (96), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 85/215 (39%), Gaps = 34/215 (15%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISE-- 650
IL +GPPG+GKT LAKA+A + F KGP + L+ +I E
Sbjct: 1066 ILFYGPPGTGKTLLAKAIATEFS--------LNFFSV------KGP---ELLNMYIGESE 1108
Query: 651 ---------ALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
A D P +V FD LDS+ + +G +++ L ++ G +
Sbjct: 1109 ANVRRVFQRARDARPCVVFFDELDSVAPKRGN-QGDSGGVMDRIVSQLLAELDGMNGGEE 1167
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
S G + + + + + +L GRFD + L ++A + + R+
Sbjct: 1168 NS----GGVFVIGATNRPDLLDTALLRPGRFDKMLYLGVSDTHRKQATILEALTRKFALH 1223
Query: 762 SDEILLDVASKCD-GYDAYDLEILVDRTVHAAVGR 795
D L VA + Y DL L + A+ R
Sbjct: 1224 PDVSLDRVAEQLPLTYTGADLYALCSDAMLKAITR 1258
>sp|Q6FW67|PEX6_CANGA Peroxisomal biogenesis factor 6 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=PEX6 PE=3 SV=1
Length = 1017
Score = 182 bits (462), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 131/417 (31%), Positives = 210/417 (50%), Gaps = 54/417 (12%)
Query: 599 PGSGKTSLAKAVAKSLEHH---KDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEALDHA 655
P GK S+ +++A L + D ++ + S ++ ++ L N +
Sbjct: 473 PKVGKASILRSIAIDLSYQFVDIDTLSVVFSSGSSDIATTFLGYLKGKLENLLPFT---G 529
Query: 656 PSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGP-IAFVA 714
+I++ ++D I+ + Q S V AL L+ + Y I P + F
Sbjct: 530 NTIILIKHIDHILKKVDQNQDIQQSRQVKALEGDLISFIKSYSR-------IYPGVVFAF 582
Query: 715 SAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEI-----------QRRSLECSD 763
++ S++ +P+ S +FD+ V P +R++I++ + ++ ++CS+
Sbjct: 583 TSASIDNLPEGFRSEIKFDYVVH--PPNEKQRRSIIDELLSTSDLFQKYGNRKLRIQCSN 640
Query: 764 EILLDVAS-KCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTL---------VR 813
EI + S G YD++ ++ V ++ + + + IK + VR
Sbjct: 641 EIEISTLSLHSAGLSPYDIQYIISLAVADSLRKCNNYLLWRQNKIKVDMISIQNALEKVR 700
Query: 814 DDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQA 873
D+S ++ ++ ++T WDDVGGL+ +++AI E I+LP K P +F
Sbjct: 701 SDYSASIGA---PSIPNVT----------WDDVGGLSSVKDAIMETIDLPLKHPELFGSG 747
Query: 874 PLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKA 933
L+ RS +L YGPPG GKT + A A SL F SVKGPELLN YIG SE VR +F KA
Sbjct: 748 -LKKRSGILFYGPPGTGKTLLAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQKA 806
Query: 934 TAAAPCLLFFDEFDSIAPKRGH--DNTGVTDRVVNQFLTELDGVEVL-TGVFVFAAT 987
A PC++FFDE DS+APKRG+ D+ GV DR+V+Q L ELDG+ GVF+ AT
Sbjct: 807 RDAKPCVIFFDEVDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSSDGDGVFIIGAT 863
>sp|Q9C1E9|PEX6_COLOR Peroxisomal biogenesis factor 6 OS=Colletotrichum orbiculare (strain
104-T / ATCC 96160 / CBS 514.97 / LARS 414 / MAFF 240422)
GN=PEX6 PE=3 SV=1
Length = 1388
Score = 182 bits (462), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/296 (39%), Positives = 164/296 (55%), Gaps = 26/296 (8%)
Query: 712 FVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLD-VA 770
VA+ ++K+P + G F +++ AP +ER+ IL ++ R + E+ L+ +A
Sbjct: 853 LVATTSDVDKVPDGV--RGLFSHELEVGAPDEAEREGILRTIVEDRGINLDPEVDLNGIA 910
Query: 771 SKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRD--DFSQAMHEFLPVAM 828
K A DL +VDR A V + L + K + VRD AM +
Sbjct: 911 LKTAALVAGDLVDVVDR---ALVAQRLRLEQISSKTGQAVTVRDLQVAGGAMARCVTKGD 967
Query: 829 RDITKTSAEGGRSG-----------WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRL 877
D+ +A +G WDDVGGL ++++A+ E I+LP + P +FA+ ++
Sbjct: 968 FDVAVEAARKNFAGAIGAPKIPNVTWDDVGGLNNVKDAVTETIQLPLERPELFAKG-MKK 1026
Query: 878 RSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAA 937
RS +L YGPPG GKT + A A SL F SVKGPELLN YIG SE VR +F +A A
Sbjct: 1027 RSGILFYGPPGTGKTLLAKAIATEYSLNFFSVKGPELLNMYIGESEANVRRVFQRARDAR 1086
Query: 938 PCLLFFDEFDSIAPKRGH--DNTGVTDRVVNQFLTELDGV----EVLTGVFVFAAT 987
PC++FFDE DS+APKRG+ D+ GV DR+V+Q L ELDG+ + GVFV AT
Sbjct: 1087 PCVVFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSGGDDTSGGVFVIGAT 1142
Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 60/152 (39%), Gaps = 33/152 (21%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISE-- 650
IL +GPPG+GKT LAKA+A + F KGP + L+ +I E
Sbjct: 1030 ILFYGPPGTGKTLLAKAIATEYS--------LNFFSV------KGP---ELLNMYIGESE 1072
Query: 651 ---------ALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
A D P +V FD LDS+ P+ S + + + ++ E
Sbjct: 1073 ANVRRVFQRARDARPCVVFFDELDSVA-----PKRGNQGDSGGVMDRIVSQLLAELDGMS 1127
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFD 733
G + + + + + +L GRFD
Sbjct: 1128 GGDDTSGGVFVIGATNRPDLLDPALLRPGRFD 1159
>sp|O13764|PEX6_SCHPO Peroxisomal ATPase pex6 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=pex6 PE=3 SV=1
Length = 948
Score = 182 bits (461), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 131/406 (32%), Positives = 201/406 (49%), Gaps = 35/406 (8%)
Query: 589 LPGH---ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCS-RLSLEKGPIIRQAL 644
+PG L+HG P +GKT K++E L + VF S + + L
Sbjct: 418 VPGFNPFFLLHGNPFTGKT-------KAVEEVASLFSAPVFTISSYEFADATADHLEAKL 470
Query: 645 SNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSS 704
F+ + +I+ +LD ++S SSD P + I + +D++
Sbjct: 471 DMFVQNVVKSPCAIIFVKDLD-VLSISSDEGNIVPGSKSIQILLSKIDLV---------K 520
Query: 705 CGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDE 764
G + + S+EKIP + S F+ ++ ER +L+ I ++
Sbjct: 521 SPQGRYIVIGTCHSIEKIPYEILSESFFE--LKFSELEMDERLELLK--IYANNVIIDKR 576
Query: 765 I-LLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHI--KPTLVRDDFSQAMH 821
I L DVA K + +LE L D AAV R + + I P + D +++
Sbjct: 577 ISLKDVALKTNSMSFGELECLPDHMTKAAVDRIKRTGYDNDSIILSGPIITEQDVDVSIN 636
Query: 822 EFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNV 881
++ + T + WDD+GGL + + +++ ++LP +FP +F+Q L+ RS V
Sbjct: 637 RI----RKEKSNTIFTVPKVNWDDIGGLEEAKTVLRDTLQLPLQFPELFSQG-LKPRSGV 691
Query: 882 LLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLL 941
LLYGPPG GKT + A A SL F+S+KGPELLN Y+G SE VR++F KA ++PC++
Sbjct: 692 LLYGPPGTGKTLLAKAVATELSLEFVSIKGPELLNMYVGESEANVRNVFEKARNSSPCVI 751
Query: 942 FFDEFDSIAPKRGH--DNTGVTDRVVNQFLTELDGVEVLTGVFVFA 985
FFDE DSIAP RG+ D+ V DRVV+Q L ELD + +VF
Sbjct: 752 FFDELDSIAPHRGNSSDSGNVMDRVVSQLLAELDSISKDNNKYVFV 797
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 91/214 (42%), Gaps = 34/214 (15%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII--------RQAL 644
+L++GPPG+GKT LAKAVA L + FV KGP + +
Sbjct: 691 VLLYGPPGTGKTLLAKAVATELS--------LEFVSI------KGPELLNMYVGESEANV 736
Query: 645 SNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSS 704
N +A + +P ++ FD LDSI P S S + + + ++ E K +
Sbjct: 737 RNVFEKARNSSPCVIFFDELDSIA-----PHRGNSSDSGNVMDRVVSQLLAELDSISKDN 791
Query: 705 CGIGPIAFVASAQSL-EKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSD 763
FV A + + + SL GRFD V L + E KA + + ++ + +
Sbjct: 792 ---NKYVFVIGATNRPDLLDPSLLRPGRFDKLVYLGINKSEESKASMLRALT-KTFKLDE 847
Query: 764 EI-LLDVASKC-DGYDAYDLEILVDRTVHAAVGR 795
I L ++A C + D+ L V +A+ R
Sbjct: 848 TIDLNEIAKNCHPNFTGADMYALCSDAVLSAIKR 881
>sp|P54777|PEX6_RAT Peroxisome assembly factor 2 OS=Rattus norvegicus GN=Pex6 PE=1 SV=1
Length = 978
Score = 181 bits (458), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 136/409 (33%), Positives = 204/409 (49%), Gaps = 42/409 (10%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEAL 652
+L+ GPPGSGKT+ A L H++ V CS L + + L S A
Sbjct: 466 VLLQGPPGSGKTTAVTAACSRLG------LHLLKVPCSSLCADSSRTVETKLQTTFSRAR 519
Query: 653 DHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGPIAF 712
P + L ++ D +G V+A + L ++DE R P+
Sbjct: 520 RCRP---VVLLLTALDLLGRDRDGLGEDARVVATLRHL--LLDEDPLSR-----CPPLMV 569
Query: 713 VASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEI-LLDVAS 771
VA+ ++ +P + ++ F +++P + S+R ++L+ L E+ L +A
Sbjct: 570 VATTSRVQDLPTDVRTA--FPHELEVPVLSESQRLSVLQALTAH--LPLGQEVNLSQLAR 625
Query: 772 KCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKP-------TLVRDDFSQAMHEFL 824
+C G+ DL L+ AA R + + + + L+ +DF QA+ +
Sbjct: 626 RCAGFVVGDLYALLTHASRAACTRIKAAGLAMSEEDEGELCAAGFPLLAEDFGQALDQL- 684
Query: 825 PVAMRDITKTSAEGGRS----GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSN 880
+ A G W DVGGL D++ I E I+LP + P + + RS
Sbjct: 685 -----QTAHSQAVGAPKIPSVSWHDVGGLQDVKKEILETIQLPLEHPELLSLG--LRRSG 737
Query: 881 VLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCL 940
+LL+GPPG GKT + A A CSL F+SVKGPEL+N Y+G SE+ VR++F++A AAAPC+
Sbjct: 738 LLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCI 797
Query: 941 LFFDEFDSIAPKRGH--DNTGVTDRVVNQFLTELDGVEVLTGVFVFAAT 987
+FFDE DS+AP RG D+ GV DRVV+Q L ELDG+ VFV AT
Sbjct: 798 IFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGAT 846
Score = 34.7 bits (78), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 45/112 (40%), Gaps = 5/112 (4%)
Query: 879 SNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAP 938
S VLL GPPG GKT V AA + L + V L E ++ FS+A P
Sbjct: 464 SCVLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRTVETKLQTTFSRARRCRP 523
Query: 939 CLLFFDEFDSIAPKRGHDNTGVTDRVV---NQFLTELDGVEVLTGVFVFAAT 987
+L D + R D G RVV L + D + + V A T
Sbjct: 524 VVLLLTALDLLG--RDRDGLGEDARVVATLRHLLLDEDPLSRCPPLMVVATT 573
>sp|Q6CPV1|PEX6_KLULA Peroxisomal biogenesis factor 6 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=PEX6 PE=3 SV=1
Length = 1000
Score = 179 bits (455), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 139/463 (30%), Positives = 216/463 (46%), Gaps = 61/463 (13%)
Query: 552 NVSSLSWMGTTASDVINRIKVLLSPDSGLWFSTYHLPLPGHILIHGP-PGSGKTSLAKAV 610
N+S L A R+K +L ++ + S ++ + I++H P GKT L ++V
Sbjct: 419 NLSPLFHYDEDAFPFAKRLKDIL--NTAIKCSARNVNVGTSIMLHSSSPNVGKTMLTRSV 476
Query: 611 AKSLEHHKDLVAHIVFVCCSRLSLEKGP---------IIRQALSNFISEALDHAPSIVIF 661
L H ++ V C L+ IR + IS + +VIF
Sbjct: 477 CAELGFH------LIHVDCLSLTSNSNTSDATNKTIGYIRAKIETIIS----YVEKVVIF 526
Query: 662 -DNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLE 720
+L++I+ + + + S + + D+++EY K K + FV S ++
Sbjct: 527 LSHLETILEDEQNQQDNTSSKMARQMNVEMADLIEEYTTKYKGT------VFVGSTNDID 580
Query: 721 KIPQSLTSSGRFDFHVQLPAPAASERKAILE----------HEIQRRSLECSDEILLDVA 770
IP + S R F + +P P +R + + RSL + L V+
Sbjct: 581 NIPAIVRS--RIKFEIDVPVPTEKQRLQMFRWYFDPYVLNSQTPKLRSLISHNVPLQTVS 638
Query: 771 SKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLV---RDDFSQAMHEFLPVA 827
+ G D+ +V + R +D + ++ RD FS ++
Sbjct: 639 VQSAGLTPMDIRSIVKAVKYKCYQRLKQNDLLIDMTDITAVINIARDRFSDSI------- 691
Query: 828 MRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPP 887
+ + WDD+GG+ ++ I + I++P K P +F+ ++ RS +L YGPP
Sbjct: 692 ------GAPKIPNVTWDDIGGMDVVKGEIMDTIDMPLKHPELFSSG-MKKRSGILFYGPP 744
Query: 888 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFD 947
G GKT + A A+ SL F SVKGPELLN YIG SE VR +F KA A PC++FFDE D
Sbjct: 745 GTGKTLLAKAIASNFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFDELD 804
Query: 948 SIAPKRGH--DNTGVTDRVVNQFLTELDGVEV-LTGVFVFAAT 987
S+APKRG+ D+ GV DR+V+Q L ELDG+ GVFV AT
Sbjct: 805 SVAPKRGNQGDSGGVMDRIVSQLLAELDGMSSGGDGVFVIGAT 847
Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 98/228 (42%), Gaps = 40/228 (17%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISE-- 650
IL +GPPG+GKT LAKA+A + + F KGP + L+ +I E
Sbjct: 738 ILFYGPPGTGKTLLAKAIASNFS--------LNFFSV------KGP---ELLNMYIGESE 780
Query: 651 ---------ALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
A D P ++ FD LDS+ P+ S + + + ++ E
Sbjct: 781 ANVRRVFQKARDAKPCVIFFDELDSVA-----PKRGNQGDSGGVMDRIVSQLLAELDGM- 834
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRR-SLE 760
SS G G + + + + + ++L GRFD + L +++A + + R+ +LE
Sbjct: 835 -SSGGDG-VFVIGATNRPDLLDEALLRPGRFDKMLYLGISDTDKKQANIIKALTRKFTLE 892
Query: 761 CSDEILLDVASKCD-GYDAYDLEILVDRTVHAAVGRYL-HSDSSFEKH 806
+I LD+A KC Y D L + A+ R D +EK+
Sbjct: 893 SGIDI-LDIAKKCPFNYTGADFYALCSDALLNAMTRVAGEVDEKWEKY 939
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 359,145,819
Number of Sequences: 539616
Number of extensions: 14970247
Number of successful extensions: 58031
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1071
Number of HSP's successfully gapped in prelim test: 823
Number of HSP's that attempted gapping in prelim test: 53428
Number of HSP's gapped (non-prelim): 4046
length of query: 1010
length of database: 191,569,459
effective HSP length: 128
effective length of query: 882
effective length of database: 122,498,611
effective search space: 108043774902
effective search space used: 108043774902
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)