Query 001813
Match_columns 1010
No_of_seqs 263 out of 1259
Neff 8.2
Searched_HMMs 46136
Date Fri Mar 29 09:55:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001813.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001813hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1959 Glycosyl hydrolase, fa 100.0 4E-229 1E-233 1915.1 80.3 961 20-1009 21-996 (996)
2 PLN02701 alpha-mannosidase 100.0 1E-182 3E-187 1677.0 92.1 919 20-1007 25-1050(1050)
3 KOG1958 Glycosyl hydrolase, fa 100.0 1E-165 3E-170 1400.4 55.9 905 20-1006 147-1128(1129)
4 PRK09819 alpha-mannosidase; Pr 100.0 4E-106 8E-111 1006.9 79.0 824 35-1005 3-875 (875)
5 KOG4342 Alpha-mannosidase [Car 100.0 1.1E-79 2.5E-84 672.2 45.0 762 33-1006 278-1078(1078)
6 PF01074 Glyco_hydro_38: Glyco 100.0 2.9E-59 6.2E-64 514.2 24.9 270 37-349 1-275 (275)
7 COG0383 AMS1 Alpha-mannosidase 100.0 5.6E-52 1.2E-56 510.0 29.5 715 36-1005 198-942 (943)
8 PF07748 Glyco_hydro_38C: Glyc 100.0 4.1E-44 9E-49 424.3 39.0 429 485-1003 1-457 (457)
9 PF09261 Alpha-mann_mid: Alpha 99.8 1.1E-21 2.5E-26 172.1 3.2 75 354-428 1-80 (80)
10 smart00872 Alpha-mann_mid Alph 99.8 3.7E-20 8E-25 162.1 5.6 74 355-428 1-79 (79)
11 COG0383 AMS1 Alpha-mannosidase 99.8 3.6E-20 7.7E-25 229.4 -1.0 358 34-430 2-389 (943)
12 PF03065 Glyco_hydro_57: Glyco 98.4 7.2E-07 1.6E-11 102.2 9.8 122 70-193 28-196 (360)
13 COG1543 Uncharacterized conser 96.2 0.0097 2.1E-07 67.3 7.2 122 68-191 75-207 (504)
14 PF01522 Polysacc_deac_1: Poly 95.4 0.13 2.8E-06 48.9 10.4 104 71-187 17-122 (123)
15 COG1449 Alpha-amylase/alpha-ma 94.8 0.75 1.6E-05 56.1 16.7 98 89-188 162-263 (615)
16 TIGR03212 uraD_N-term-dom puta 92.5 10 0.00022 42.1 19.3 111 70-194 75-187 (297)
17 TIGR02884 spore_pdaA delta-lac 92.5 0.95 2E-05 48.2 10.8 101 76-188 54-156 (224)
18 TIGR02764 spore_ybaN_pdaB poly 92.2 1.3 2.9E-05 45.7 11.3 101 75-188 22-124 (191)
19 TIGR03006 pepcterm_polyde poly 90.8 2.2 4.8E-05 46.6 11.5 112 68-191 24-139 (265)
20 TIGR02873 spore_ylxY probable 89.5 3.3 7.2E-05 45.3 11.7 101 74-187 100-202 (268)
21 PRK14582 pgaB outer membrane N 83.9 29 0.00064 42.9 16.5 80 110-192 168-275 (671)
22 PRK14581 hmsF outer membrane N 80.8 8.2 0.00018 47.5 10.2 81 109-192 167-275 (672)
23 PRK15394 4-deoxy-4-formamido-L 70.9 1.8E+02 0.0039 32.4 16.9 81 110-194 92-176 (296)
24 PF07481 DUF1521: Domain of Un 69.8 40 0.00088 33.2 9.6 95 595-704 8-103 (171)
25 PF08672 APC2: Anaphase promot 63.5 8.6 0.00019 31.6 3.3 23 106-128 36-58 (60)
26 PF06044 DRP: Dam-replacing fa 31.6 74 0.0016 33.7 4.9 58 71-128 186-250 (254)
27 TIGR03826 YvyF flagellar opero 30.3 46 0.001 32.4 2.9 52 68-126 26-77 (137)
28 COG0726 CDA1 Predicted xylanas 27.0 5.1E+02 0.011 27.4 11.0 115 48-186 65-181 (267)
29 PRK10148 hypothetical protein; 26.2 25 0.00053 34.7 0.3 17 160-176 123-139 (147)
30 PF12395 DUF3658: Protein of u 25.7 1.1E+02 0.0023 28.7 4.5 69 37-132 40-108 (111)
31 TIGR03593 yidC_nterm membrane 24.3 3.9E+02 0.0085 30.6 9.8 28 595-622 74-101 (366)
32 PF10074 DUF2285: Uncharacteri 21.1 19 0.0004 33.5 -1.6 29 98-129 74-102 (106)
No 1
>KOG1959 consensus Glycosyl hydrolase, family 38 - alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.5e-229 Score=1915.13 Aligned_cols=961 Identities=51% Similarity=0.845 Sum_probs=870.4
Q ss_pred cceeeecCCCCCCCCceEEEEEecccCCCccccchheeeeccCccchhhhHHHHHHHHHHHHHhCCCCeEEEechhHHHH
Q 001813 20 SKYMMYNTSAGIVPGKINVHLVPHSHDDVGWLKTVDQYYVGSNNSIQVACVQNVLDSLIPALVADKNRKFIYVEQAFFQR 99 (1010)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~V~lvpHSH~D~gWl~t~~ey~~~~~~~i~~~~v~~il~~vl~~L~~~p~~kF~~~e~~~~~~ 99 (1010)
..++.|++|+...+++++||||||||+|+|||||+||||+|++|.||++.|++|||+||++|.+||+|||+++|++||.+
T Consensus 21 ~~~~~y~t~~~~~~~~invHlVPHSHDDVGWLKTVDQyy~G~~n~Iq~AgVqyIldSVV~eLl~dp~RRFI~VE~aFF~r 100 (996)
T KOG1959|consen 21 ESRAGYNTCHKVVPNMINVHLVPHSHDDVGWLKTVDQYYYGSKNKIQHAGVQYILDSVVEELLKDPNRRFIYVETAFFAR 100 (996)
T ss_pred hHhhccCCCccccCceeEEEecCCccCccceeeeehhheecCCcccchhhHHHHHHHHHHHHhcCCccceehhhHHHHHH
Confidence 45556999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCHHHHHHHHHHHHCCCEEEEcceeeeeccCCCChHHHHHHHHHHHHHHHHHcC--CCCceeeecCCCCCchhhHH
Q 001813 100 WWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIKEQFN--VTPRIGWQIDPFGHSAVQAY 177 (1010)
Q Consensus 100 w~~~~~p~~~~~vk~lV~~GrlE~vgGgwv~~Dea~~~~es~Irql~~G~~~l~~~fG--~~p~v~w~~D~FGhs~~~p~ 177 (1010)
||.+|++++|+.||+||++|||||+||||||+|||.+||.++|+||+.||+||.++|| .+|++||||||||||+.+|+
T Consensus 101 WW~~qS~~~k~~Vk~LV~~GrLEFi~Ggw~MnDEA~~hY~dvIDQ~TlGlrfL~~tFG~cgrPrvgWqIDPFGHSreqAs 180 (996)
T KOG1959|consen 101 WWNEQSETQKEQVKKLVNEGRLEFIGGGWSMNDEATTHYQDVIDQFTLGLRFLKDTFGECGRPRVGWQIDPFGHSREQAS 180 (996)
T ss_pred HHHhcCHHHHHHHHHHHhcCCEEEecCeeeecchhhhhHHHHHHHHHHHHHHHHHHhcccCCcceeeeeCCCCcchHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999 79999999999999999999
Q ss_pred HHHhhcCCcEEEEeecCHHhHHHhhccCceeEEEeeCCCCCCCCceeEeeCCCCCCCCCCCCccccCCCCCCccCCcccc
Q 001813 178 LLSAEVGFDFLFFARIDYQDRAKRINEKTLEVVWRASKSLGSSAQIMTGISPKNYEPPSDNFYFEVGDTSPIVQDDMNLF 257 (1010)
Q Consensus 178 ll~~~~G~~~~~~~R~~~~~~~~~~~~~~~eF~W~~~d~~~~gs~i~th~~~~~Y~~p~~~f~f~~~~~~~~~~~~~~~~ 257 (1010)
|| ++|||++.+|+||||++|+.|..++.|||+|+|++++|+.++|||++|+.||++| +|||||.+|.+.|++|++.+.
T Consensus 181 lf-AqmGfd~~fFaRiDy~dK~~R~~~~~lE~iW~~S~sL~~~~~iFTg~l~n~Y~~P-~gfc~dv~c~d~Pi~D~~~~~ 258 (996)
T KOG1959|consen 181 LF-AQMGFDGVFFARIDYQDKAKRMKEKTLEMIWRGSESLGSSSQIFTGALYNHYSPP-PGFCFDVLCGDDPIIDGPRSY 258 (996)
T ss_pred HH-HHhCccchheeecchhhHHHHHhhccceEEeecCccccchhhhhhhccccCCCCC-CCceeccccCCCCCCCCCCCC
Confidence 99 9999999999999999999999999999999999999999999999999999999 999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHHHhhhcCCCeEEEeecCCCCCcchHHHHHHHHHHHHHHhcC---C-CeeEEEcChhhhHHHHHh
Q 001813 258 DYNVPERVNDFVSAAIAQANITRTNHIMWTMGTDFKYQYAHTWFRQMDKFIHYVNQD---G-RVNALYSTPSMYIDAKYA 333 (1010)
Q Consensus 258 ~~nv~~~~~~~~~~~~~~~~~~~t~~il~~~G~Df~y~~a~~~f~~~~~li~~~N~~---~-~~~i~~sT~~~Yf~al~~ 333 (1010)
+|||++|++.|++.++.++..|+|||||+|||+||+|.+|..||+||||||+|+|+. + .+++.||||+||++++++
T Consensus 259 d~NVkerVd~Fv~~a~~~a~~~RtnHim~~MG~DFqY~~A~v~fknmDkLI~yVN~~qa~gs~vnv~YSTpscYl~alh~ 338 (996)
T KOG1959|consen 259 DYNVKERVDDFVAYAKNQAAYYRTNHIMWPMGDDFQYENANVWFKNMDKLIKYVNERQADGSKVNVFYSTPSCYLNALHA 338 (996)
T ss_pred CccHHHHHHHHHHHHHHhHhheecceEEEeccCCceehhhhHHHhhHHHHHHHhhhhhcCCceEEEEEcChHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999943 4 799999999999999999
Q ss_pred cCCCCCCccCCCccccccCCCceeeeecccchhhHHHHHhhHHHHHHHHhhhhccccc--CCCchHHHHHHHHhhhcccc
Q 001813 334 ANESWPLKTDDFFPYADRENAYWTGYFTSRPALKGYVRTMSAYYLAARQLEFFKGRNE--VGLSTDSLADALALVQHHDA 411 (1010)
Q Consensus 334 ~~~~~p~~~gDf~py~~~~~~yWtG~yTSr~~~K~~~R~~e~~L~~ae~l~~l~~~~~--~~~~~~~~w~~l~~~QhHDa 411 (1010)
.+..||+++.|||||++++|.||||||||||.+|++.|.++++|++|++|+++|++.. ..+.++.|+++|++.|||||
T Consensus 339 ~~~Twp~Kt~DFFPYa~~~~syWTGyFTSRPa~Kr~~R~~s~~lq~akQL~~la~l~~~~~~~dl~~Lream~i~QHHDA 418 (996)
T KOG1959|consen 339 ANQTWPVKTDDFFPYASEPHSYWTGYFTSRPALKRFERDGSHYLQVAKQLSVLAGLSSTEQGPDLDYLREAMAIMQHHDA 418 (996)
T ss_pred hcCcccccccccCcCCCCCCcceeeeccccHHHHHHHhhhhHHHHHHHHHhhhcCCCccccCccHHHHHHHHHHHhhccc
Confidence 9999999999999999999999999999999999999999999999999999998654 56789999999999999999
Q ss_pred ccCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCcCcccccccccccCCCCccccCCCCceEEEEEc
Q 001813 412 VSGTEKQHVADDYAKRLSIGYTEAEKVVAASLACLTEFSKNGCVNPITNFQQCPLLNISYCPPSEVDLSSGKSLVVVVYN 491 (1010)
Q Consensus 412 ItGTs~~~V~~dy~~rl~~a~~~~~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~ln~s~~~~~~~~l~~~~~~~v~vfN 491 (1010)
||||+|++|.+||.++|..|+..|++++..+|+.|.... ..+|++|.+||+|+||.+++ .++.+.|+|||
T Consensus 419 VTGTekq~Va~DY~r~La~g~~~~e~~~~~aL~~lt~~~-------~~~f~~C~~lNiS~C~~t~~---~~~~~~v~~YN 488 (996)
T KOG1959|consen 419 VTGTEKQHVADDYARRLADGILGAEKLARDALRKLTNLP-------NGEFQSCLLLNISECAFTKD---GADNFIVTLYN 488 (996)
T ss_pred ccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC-------CccchhhhhhccccCCCCcC---CcCcEEEEEEc
Confidence 999999999999999999999999999999999998743 34799999999999999863 36789999999
Q ss_pred CCCceEeEEEEEEEeCCeEEEEcCCCCEEEEEEeecccccccccccccccccCCCCCCCCcEEEEEEEecCCCceEEEEE
Q 001813 492 PLGWKREDIIRIPVINENVTVKDSKGKVIESQLLPLLKDSMSLRNSYSTAYLGKSTNVTPSYWLAFSASVPPLGFNTYII 571 (1010)
Q Consensus 492 pl~~~r~~~V~i~v~~~~~~v~d~~g~~v~~Qi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~f~~~vPplG~~~~~v 571 (1010)
||+|.++++|+|||+.+++.|+|+.|++|++|++|.......+.. ......++|+|.|.|||+|+++|.|
T Consensus 489 pLa~~~t~~VRiPV~~~~~~V~D~~G~~v~Sqivp~~~~~~al~~----------~~~~~~~eLvf~asvpplg~aty~i 558 (996)
T KOG1959|consen 489 PLAHTVTQYVRIPVKEENYRVTDEKGRTVPSQIVPVPWQVLALES----------RNNDTKHELVFKASVPPLGIATYFI 558 (996)
T ss_pred CCcceeeeEEEEeccCCCeEEECCCCCCcccceeccchhhhhhhc----------cccCCCceEEEEEEecCccceEEEE
Confidence 999999999999999999999999999999999998754332211 1234578999999999999999999
Q ss_pred EeCCcccCccccceeeeccccCCCceEEcCCeEEEEEeCCCCeEEEEEecCCCcEEEEEEEEEEeecCCCCCCCCCCcce
Q 001813 572 SSAKQAASHSGMRTVYKSQIRQNDTIEVGPGNLKLLYSGKRAKLMRYINSKTSVNKLLEQSYIYYRGDDGSKDLQPSGAY 651 (1010)
Q Consensus 572 ~~~~~~~~~~~~s~~~~~~~~~~~~~~ieN~~~~v~~~~~~G~l~sl~dk~~g~~~~~~~~~~~Y~~~~g~~~~~~sGAY 651 (1010)
++.......+ .+..............|+|+++++.||..+|.++++....+|.+..+.|.|.+|.+..|+++.+.||||
T Consensus 559 ~k~~~~~~~~-~~~~~~i~~~~~n~~~V~n~~~kl~fd~~tG~l~~v~~n~t~~t~~V~Q~f~~Y~~~~g~n~~q~SgAY 637 (996)
T KOG1959|consen 559 KKVASTERGS-ASHVRNIKKRESNATEVGNSHLKLVFDNDTGLLKTVEMNQTGVTENVDQEFGYYKGYRGDNDKQASGAY 637 (996)
T ss_pred eecCcccccc-cccccccccccCcceEeccceEEEEEcCCCCceEEEEecccCcceeeeeeeEEEEeecCCcCCccCcce
Confidence 9655432210 011111111223348999999999999888999999988899999999999999998887567999999
Q ss_pred eEeCCCCCccCC-CCCceEEEEeCCceEEEEEEEcCeEEEEEEEEcCCCceEEEEEECcccccCCCCcEEEEEEEeeccC
Q 001813 652 IFRPNGTYPIEP-EGQLSFTILRGPLLDEVHQRINPWIYQVTRVYKGKDHAEIEFTVGPIPIDDGIGKEVVTQITSNMIS 730 (1010)
Q Consensus 652 ~F~P~~~~~~~~-~~~~~i~v~~Gpl~~~v~~~~~~~i~~~irLy~~~~~ie~e~~v~~i~~~~~~~~ev~~~f~t~i~s 730 (1010)
+|+| +...+++ +....++|+.|||+.||++.++.|++|.+|+|+|.+++||||.|+|||++++.|||++.||+|+|.|
T Consensus 638 iFRp-~~~~~~~~~~~vel~vv~G~LV~EVhQ~f~~wiSQviRvy~g~~~~E~Ew~VGpIp~~d~~gkEvVtr~~t~i~S 716 (996)
T KOG1959|consen 638 IFRP-GQADIPIVSDQVELTVVDGPLVKEVHQQFNPWISQVIRVYEGKNHVEFEWLVGPIPIDDGIGKEVVTRFSTEISS 716 (996)
T ss_pred EecC-CCCCccccccceEEEEecCchHHHHHHHHHHHHhheeEecCCCcceEEEEEecceecCCCccceEEEEecccccc
Confidence 9999 5443443 3346889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEcCCcccceecccccccCcccccccccccceEeccceeeEEecCcceEEEeeccccccccCCCeEEEEEEeeecc
Q 001813 731 NKTFYTDSSGRDFIERIRDYRKDWNLEVNQPIAGNYYPVNLGIYMKDNSSELSILVDRSVGGSSIADGQLELMLHRRLVA 810 (1010)
Q Consensus 731 ~~~fyTDsnG~~~i~R~~~~r~~w~~~~~~pv~~NyYP~~s~i~i~D~~~~ltvl~dr~~G~ssl~~G~iElml~Rr~~~ 810 (1010)
++.|||||||++|+||.+++|++|....++|++||||||++.|||+|++.+|+|||||+|||+|++||+||||||||+++
T Consensus 717 ~g~fYTDSNGRe~~kR~~d~r~~~~~~~~epiAGNYYPvt~~i~lqD~~~rl~vL~DRAqGgsSl~dG~lElMLHRRl~~ 796 (996)
T KOG1959|consen 717 NGVFYTDSNGREMIKRVRDKREDFVLDVNEPIAGNYYPVTSRIYLQDSKKRLSVLNDRAQGGSSLKDGQLELMLHRRLLN 796 (996)
T ss_pred CceEEecCcHHHHHHHHhcccCCCccccCccccccccccceeeEEecCCceEEEEeecccCCccccCCeEEEEeeehhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccCccccccccccccccccCeEEeeEEEEEecCccchh-hhcccchhhhccCceeeecccCCCccccccccccccCcc
Q 001813 811 DDNRGVSEALNETVCVFDKCEGLTIIGKYYLRIDPVGEAA-KWRRSFGQEIYSPFLLAFTEQDGDHWANSHLATYSAMDT 889 (1010)
Q Consensus 811 DD~rGvge~l~e~~~~~~~~~gl~~~~~~~l~l~~~~~~~-~~~r~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~ 889 (1010)
||+|||||+|||+.++. .||+++|+|++.|++..+++ ..+|...+++..|.+.+|++.....+........+.+..
T Consensus 797 DD~~Gv~EaLnEt~~~~---~gL~~rGk~~~~l~~~~d~a~~~~r~~~~ei~~P~~~~f~~~~~~~~~~~~s~~~~~f~~ 873 (996)
T KOG1959|consen 797 DDGRGVGEALNETVYGH---AGLIARGKLYVLLDKAGDGATGWRRLAEQEIHLPLWKFFSKPEGGEALNSLSIPGSAFSG 873 (996)
T ss_pred ccccccchhcccccccc---cceEEeeeEEEEEecccccchhhhhhhhhhcccHHHHHhhcCCCccchhhcCCCcccccc
Confidence 99999999999999862 79999999999999888765 677888999999999999987654443322222222222
Q ss_pred ccCCCCcceEEEeeecCCCcEEEEEeccccccccCCCcceeeeeccccCCcCccceEEeccccccchhhHhhhcceeeee
Q 001813 890 TYVLPDNVALITLQELDSGKILLRLAHLYEIEEDTDLSVMSSVELKKVFPKKKISKVTEMNLSANQERAVMEKKRLVWRV 969 (1010)
Q Consensus 890 ~~~lp~~vhlltl~~~~~~~illRl~~l~~~~~~~~~s~~~~v~l~~lf~~~~~~~i~etsLt~~~~~~~~~~~~~~w~~ 969 (1010)
+..||.+||||||++|+++.+||||+|+|+++||+.+|++++|||.+||..+++..|+||||+||+++++| +|++|..
T Consensus 874 ~~~lP~~vhLlTLe~~~~~~vLlRleh~~e~gED~~~s~vvsfnl~~lf~~~~i~~i~EttL~gN~~ls~m--kr~k~~~ 951 (996)
T KOG1959|consen 874 SYDLPQSVHLLTLEEWSKDEVLLRLEHLYEVGEDSELSQVVSFNLRKLFSALDIVEIRETTLDGNQPLSDM--KRFKFHW 951 (996)
T ss_pred ccCCCcceeeeecccCCCCceEeeehhhhhcccccccCcceEEEhHHhhcccCeeEEEEeeccCccChhhh--hhhcccc
Confidence 35899999999999999999999999999999999999999999999999999999999999999999999 5555544
Q ss_pred c--CCC--CCCCcccCCCCCCC-CCceEEecCcceEEEEEEEeec
Q 001813 970 E--GSS--KEQPTAVRGSPVDP-AKLVVELAPMEIRTFVIEFYSE 1009 (1010)
Q Consensus 970 ~--~~~--~~~~~~~~~~~~~~-~~~~v~l~PmeIrTf~i~~~~~ 1009 (1010)
. +.. .....+.+..|+++ +.+.|+|.|||||||+|+.+++
T Consensus 952 ~~~G~~~~~~~~~~s~~~p~~~~~~~~vtL~PmeIRTfii~~~~~ 996 (996)
T KOG1959|consen 952 DVSGEKPSGVEYSTSRHKPLDKTSEFIVTLHPMEIRTFIIKFQQK 996 (996)
T ss_pred CCCCCCCCCccccccCCCCCCcccceEEEEeccEEEEEEEEEecC
Confidence 3 311 11123445556654 6789999999999999998763
No 2
>PLN02701 alpha-mannosidase
Probab=100.00 E-value=1.5e-182 Score=1677.01 Aligned_cols=919 Identities=28% Similarity=0.492 Sum_probs=768.0
Q ss_pred cceeeecCCCCCCCCceEEEEEecccCCCccccchheeeeccCccchhhhHHHHHHHHHHHHHhCCCCeEEEechhHHHH
Q 001813 20 SKYMMYNTSAGIVPGKINVHLVPHSHDDVGWLKTVDQYYVGSNNSIQVACVQNVLDSLIPALVADKNRKFIYVEQAFFQR 99 (1010)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~V~lvpHSH~D~gWl~t~~ey~~~~~~~i~~~~v~~il~~vl~~L~~~p~~kF~~~e~~~~~~ 99 (1010)
|=.|.|+..++. +++++||||||||||+|||||++|||. +.++.||++||+.|++||+|||+|+|++||++
T Consensus 25 g~~~~y~~~~~~-~~~l~VhlVpHSH~D~gWl~T~~eyy~--------~~~~~ild~vv~~L~~dp~rkFi~~E~~fl~~ 95 (1050)
T PLN02701 25 GWRVKYRGDEWD-REKLKVFVVPHSHNDPGWILTVEEYYQ--------EQSRHILDTIVESLSKDPRRKFIWEEMSYLER 95 (1050)
T ss_pred ccceeecccccC-CcceEEEEeCCCCCCHHHcCcHHHHHH--------HHHHHHHHHHHHHHHhCcCcceeeccHHHHHH
Confidence 445779888775 688999999999999999999999997 89999999999999999999999999999999
Q ss_pred HHhcCCHHHHHHHHHHHHCCCEEEEcceeeeeccCCCChHHHHHHHHHHHHHHHHHcCCCCceeeecCCCCCchhhHHHH
Q 001813 100 WWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLL 179 (1010)
Q Consensus 100 w~~~~~p~~~~~vk~lV~~GrlE~vgGgwv~~Dea~~~~es~Irql~~G~~~l~~~fG~~p~v~w~~D~FGhs~~~p~ll 179 (1010)
||++++|+++++||+||++||||||||||||+|||++|||+|||||++||+|++++||+.|++||+|||||||++|||||
T Consensus 96 Ww~~~~pe~~~~vk~LV~~GrLE~vgGgwvm~DEa~~~~esiI~Ql~~G~~~l~~~fG~~P~~~W~iDpFGhs~~~P~Ll 175 (1050)
T PLN02701 96 WWRDASPSKKEAFTKLVKNGQLEIVGGGWVMNDEANSHYFAIIEQITEGNMWLNDTIGVAPKNSWAIDPFGYSSTMAYLL 175 (1050)
T ss_pred HHHhcCHHHHHHHHHHHHcCCEEEECCceecccccccCHHHHHHHHHhhhHHHHhhcCCCCCcCccCCCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCcEEEEeecCHHhHHHhhccCceeEEEeeCCCCCCCCceeEeeCCC-CCC-----CCCCCCc--cccCC------
Q 001813 180 SAEVGFDFLFFARIDYQDRAKRINEKTLEVVWRASKSLGSSAQIMTGISPK-NYE-----PPSDNFY--FEVGD------ 245 (1010)
Q Consensus 180 ~~~~G~~~~~~~R~~~~~~~~~~~~~~~eF~W~~~d~~~~gs~i~th~~~~-~Y~-----~p~~~f~--f~~~~------ 245 (1010)
++|||++++|+|++|++|+.|..++.+||+|+++++.++|++||||+||+ +|+ .||++|| ||..+
T Consensus 176 -~~~G~~~~~~~R~~y~~k~~~~~~~~~eF~W~~s~~~~dgs~Ift~~lp~y~Y~~p~~~~p~p~~c~~Fd~~~~~~~~~ 254 (1050)
T PLN02701 176 -RRMGFENMLIQRTHYEVKKELAQNKNLEYIWRQSWDAEETTDIFVHMMPFYSYDIPHTCGPEPAICCQFDFARMRGFQY 254 (1050)
T ss_pred -HhCCCceEEEeccchHHHHHHhhcCCceEEEeCCCCCCCCCEEEEEEccccccCcccccCCCccccccccccccccccc
Confidence 99999999999999999999999999999999987777799999999995 554 3336666 55432
Q ss_pred -CCCCccCCccccCCChHHHHHHHHHHHHHHhhhcCCCeEEEeecCCCCC---cchHHHHHHHHHHHHHHhcCC--CeeE
Q 001813 246 -TSPIVQDDMNLFDYNVPERVNDFVSAAIAQANITRTNHIMWTMGTDFKY---QYAHTWFRQMDKFIHYVNQDG--RVNA 319 (1010)
Q Consensus 246 -~~~~~~~~~~~~~~nv~~~~~~~~~~~~~~~~~~~t~~il~~~G~Df~y---~~a~~~f~~~~~li~~~N~~~--~~~i 319 (1010)
.|+|..+++.++++|+++|++.|++++++++..|+++++|+|+|+||+| .+|..||+||++||+++|+++ .+++
T Consensus 255 ~~cp~~~~p~~~~~~nv~~r~~~~~~~~~~~s~~~rtn~iL~p~GdDf~~~~~~~a~~~f~n~dkli~~iN~~~~~~~~i 334 (1050)
T PLN02701 255 ELCPWGKHPVETNDENVQERAMKLLDQYRKKSTLYRTNTLLVPLGDDFRYISIDEAEAQFRNYQKLFDYINSNPSLKAEV 334 (1050)
T ss_pred ccCcccCCccccchhHHHHHHHHHHHHHHHhhccccCCeEEEecCCCCCCcchhHHHHHHHhHHHHHHHHhhCcccCceE
Confidence 1333333456889999999999999999999999999999999999999 467889999999999999874 4899
Q ss_pred EEcChhhhHHHHHhcC----------------CCCCCccCCCccccccCCCceeeeecccchhhHHHHHhhHHHHHHHHh
Q 001813 320 LYSTPSMYIDAKYAAN----------------ESWPLKTDDFFPYADRENAYWTGYFTSRPALKGYVRTMSAYYLAARQL 383 (1010)
Q Consensus 320 ~~sT~~~Yf~al~~~~----------------~~~p~~~gDf~py~~~~~~yWtG~yTSr~~~K~~~R~~e~~L~~ae~l 383 (1010)
+||||++||+++++.. ..||+++||||||+++.++||||||||||.+|+++|.+|++|++||+|
T Consensus 335 ~~ST~~~Yf~~l~~~~~~~~~~~~ge~~~~~~~~~p~~~gDff~Ya~~~~~yWTGyyTSRp~lK~~~R~~e~~L~~aE~L 414 (1050)
T PLN02701 335 KFGTLEDYFSTLRDEADRINYSRPGEVGSGEVPGFPSLSGDFFTYADRQQDYWSGYYVSRPFFKAVDRVLEQTLRAAEIL 414 (1050)
T ss_pred EECCHHHHHHHHHhhhccccccccccccccccCCCceecccccccccccccccceeeecHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998753 479999999999999999999999999999999999999999999999
Q ss_pred hhhcc--------cccC---CCchHHHHHHHHhhhccccccCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Q 001813 384 EFFKG--------RNEV---GLSTDSLADALALVQHHDAVSGTEKQHVADDYAKRLSIGYTEAEKVVAASLACLTEFSKN 452 (1010)
Q Consensus 384 ~~l~~--------~~~~---~~~~~~~w~~l~~~QhHDaItGTs~~~V~~dy~~rl~~a~~~~~~~~~~~l~~L~~~~~~ 452 (1010)
++++. ..++ .+.++.+||+|+++||||||||||+++|++||..||.+|+..++.+++.|++.|+.....
T Consensus 415 ~sla~~~~~~~~~~~~~~~~~~~L~~~wk~l~~~QhHDaItGTsk~~V~~Dy~~rl~~~~~~~~~~~~~al~~L~~~~~~ 494 (1050)
T PLN02701 415 FSFLLGYCRRFQCEKLPTSFSYKLTAARRNLALFQHHDGVTGTAKDHVVVDYGTRMHTSLQDLQIFMSAAVEVLLGIRHE 494 (1050)
T ss_pred HHHHhhhhhhccccCCChhhHHHHHHHHHHHHhhccCcCcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 99842 2244 245789999999999999999999999999999999999999999999999999874322
Q ss_pred CCCCCCcCccccc-ccccccCCCCcc-ccCCCCceEEEEEcCCCceEeEEEEEEEeCCeEEEEcCCCCEEEEEEeecccc
Q 001813 453 GCVNPITNFQQCP-LLNISYCPPSEV-DLSSGKSLVVVVYNPLGWKREDIIRIPVINENVTVKDSKGKVIESQLLPLLKD 530 (1010)
Q Consensus 453 ~~~~~~~~~~~~~-~ln~s~~~~~~~-~l~~~~~~~v~vfNpl~~~r~~~V~i~v~~~~~~v~d~~g~~v~~Qi~~~~~~ 530 (1010)
.+..+...|+.|. .+|++.||.+.. .+..++...|+|||||+|+|+++|+|+|+.+.+.|+|.+|++|++|++|.+..
T Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvvfNpL~~~r~~vV~v~V~~~~~~V~d~~g~~v~~Qi~~~~~~ 574 (1050)
T PLN02701 495 KSDQTPSWFEPEQSRSKYDMLPVHKVINLREGKAHRVVFFNPLEQTREEVVMVVVDRPAVCVFDSNWTCVPSQISPEWQH 574 (1050)
T ss_pred ccccccccccccccccccccccccccccccCCCceEEEEECCCCceeeEEEEEEecCCcEEEEcCCCCEEeEEEeccccc
Confidence 2222334577784 458899987642 23345668999999999999999999999999999999999999999988642
Q ss_pred cccccccccccccCCCCCCCCcEEEEEEEecCCCceEEEEEEeCCcccCcccccee--------------eeccccCCCc
Q 001813 531 SMSLRNSYSTAYLGKSTNVTPSYWLAFSASVPPLGFNTYIISSAKQAASHSGMRTV--------------YKSQIRQNDT 596 (1010)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~~~~~l~f~~~vPplG~~~~~v~~~~~~~~~~~~s~~--------------~~~~~~~~~~ 596 (1010)
... ......|+|+|.++||||||++|.|............+++ ........+.
T Consensus 575 ~~~-------------~~~~~~~~l~F~a~vPplG~~ty~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (1050)
T PLN02701 575 DGE-------------KLFTGRHRLYWKASVPALGLETYFIANGNVSCEKAVPAKLKVFNSDDKFPCPEPYSCSKLEGDT 641 (1050)
T ss_pred ccc-------------ccccceEEEEEEEecCCceeEEEEEEEcCCCcccccccccccccccccccccccccccccCCCc
Confidence 110 0123568999999999999999999865322110000000 0000112345
Q ss_pred eEEcCCeEEEEEeCCCCeEEEEEecCCCcEEEEEEEEEEeecCCCCCCCCCCcceeEeCCCCC-ccCCCCCceEEEEeCC
Q 001813 597 IEVGPGNLKLLYSGKRAKLMRYINSKTSVNKLLEQSYIYYRGDDGSKDLQPSGAYIFRPNGTY-PIEPEGQLSFTILRGP 675 (1010)
Q Consensus 597 ~~ieN~~~~v~~~~~~G~l~sl~dk~~g~~~~~~~~~~~Y~~~~g~~~~~~sGAY~F~P~~~~-~~~~~~~~~i~v~~Gp 675 (1010)
+.|||++++|+||+.+|.|+++++|++|++..+.++|.+|.+ +.||||+|+|++.+ ++. .....+.|++||
T Consensus 642 ~~ieN~~lkl~Fd~~TG~L~si~~~~~g~~~~v~q~f~~Y~s-------~~SGAYiFrP~~~~~p~~-~~~~~~~v~~Gp 713 (1050)
T PLN02701 642 VEISNSHQTLGFDVKTGLLRKIKIHKNGSETVVGEEIGMYSS-------QGSGAYLFKPDGEAQPIV-QAGGLVVVSEGP 713 (1050)
T ss_pred EEEecCeEEEEEcCCCCceeEEEecccCceecceeeeeeecC-------CCCcceEEcCCCCCcccC-CCCceEEEEeCC
Confidence 899999999999988999999999999999999999999973 45799999998875 332 222345689999
Q ss_pred ceEEEEEEE-----cCeEEEEEEEEcC-----CCceEEEEEECcccccCCCCcEEEEEEEeeccCCcEEEEcCCccccee
Q 001813 676 LLDEVHQRI-----NPWIYQVTRVYKG-----KDHAEIEFTVGPIPIDDGIGKEVVTQITSNMISNKTFYTDSSGRDFIE 745 (1010)
Q Consensus 676 l~~~v~~~~-----~~~i~~~irLy~~-----~~~ie~e~~v~~i~~~~~~~~ev~~~f~t~i~s~~~fyTDsnG~~~i~ 745 (1010)
++++|++.+ +++++|++|||++ ...||++++||+||. +..|+|++|||.|+|+|+++||||+|||||+|
T Consensus 714 lv~eV~~~~~~~~~~s~isQ~iRLY~~~~~~~~~~vE~e~~V~~ip~-d~~~kEii~R~~T~i~s~~~FYTDsNG~qm~k 792 (1050)
T PLN02701 714 LVQEVHSVPKTKWEKSPLSRSTRLYHGGKSVQDLSVEKEYHVELLGH-DFNDKELIVRFKTDIDNKRVFYSDLNGFQMSR 792 (1050)
T ss_pred EEEEEEEEeecccCCcceEEEEEEecCCCccccceEEEEEEecCccc-CCCCcEEEEEEeecccCCCeEEEcCccceeee
Confidence 999999976 5789999999998 678999999999986 67899999999999999999999999999999
Q ss_pred cccccccCcccccccccccceEeccceeeEEe-cCcceEEEeeccccccccCCCeEEEEEEeeecccCccCccccccccc
Q 001813 746 RIRDYRKDWNLEVNQPIAGNYYPVNLGIYMKD-NSSELSILVDRSVGGSSIADGQLELMLHRRLVADDNRGVSEALNETV 824 (1010)
Q Consensus 746 R~~~~r~~w~~~~~~pv~~NyYP~~s~i~i~D-~~~~ltvl~dr~~G~ssl~~G~iElml~Rr~~~DD~rGvge~l~e~~ 824 (1010)
|+ +| .++|++||||||+++|||+| ++.||||+|||++||||+++|+||||||||+++||+|||||||+|+.
T Consensus 793 R~-----~~---~~~Pv~gNYYPv~s~a~IqD~~~~rltvltdrs~G~sSl~~GqLEiMLhRRLl~DD~rGvge~l~dnk 864 (1050)
T PLN02701 793 RE-----TY---DKIPLQGNYYPMPSLAFLQGSNGQRFSVHSRQSLGVASLKNGWLEIMLDRRLVQDDGRGLGQGVMDNR 864 (1050)
T ss_pred ec-----cc---ccCccccccccccceEEEEcCCCCeEEEEeccCcccccCCCcEEEEEEEeecccccCccccccccccc
Confidence 97 34 36999999999999999999 66899999999999999999999999999999999999999999974
Q ss_pred cccccccCeEEeeEEEEEecCccchhh------------hcccchhhhccCceeeecccCCC-ccccccccccccCcccc
Q 001813 825 CVFDKCEGLTIIGKYYLRIDPVGEAAK------------WRRSFGQEIYSPFLLAFTEQDGD-HWANSHLATYSAMDTTY 891 (1010)
Q Consensus 825 ~~~~~~~gl~~~~~~~l~l~~~~~~~~------------~~r~~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~l~~~~ 891 (1010)
++..+|+|+||+...... ..+..+..|++|++++++..... ........+|++|..
T Consensus 865 ---------~~~~~f~ll~e~~~~~~~~~~~~~~~~~Sl~sh~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~-- 933 (1050)
T PLN02701 865 ---------PMNVVFHLLLESNISSSPPASNPLPLQPSLLSHRVGAHLNYPMHAFLAKKPQATSVENPQDTSFAPLAK-- 933 (1050)
T ss_pred ---------cccceEEEEEecccccCCCCCCCCcCCccHHHHHHHHhhcCCchhhcccCccccccccccccccccccC--
Confidence 688999999996653210 11235678899999888533221 111112267888864
Q ss_pred CCCCcceEEEeeecCCC-------------cEEEEEeccccccc----cCCCcce-e-eeeccccCCcCccceEEecccc
Q 001813 892 VLPDNVALITLQELDSG-------------KILLRLAHLYEIEE----DTDLSVM-S-SVELKKVFPKKKISKVTEMNLS 952 (1010)
Q Consensus 892 ~lp~~vhlltl~~~~~~-------------~illRl~~l~~~~~----~~~~s~~-~-~v~l~~lf~~~~~~~i~etsLt 952 (1010)
+||||+||+|||++.+. .||+|.+ ++|+- +..++.. . .|+|.+||.++.+.++++||||
T Consensus 934 ~lpcD~hlv~lrt~~~~~~~~~~~~~~~~~~~l~r~~--~d~~~~~~~~~~c~~~~~~~~~~~~lf~~l~~~~~~~tsl~ 1011 (1050)
T PLN02701 934 PLPCDLHIVNFKVPRPSKYSQQEAEDPRFGLLLQRRG--WDSSYCRKGGTQCTTLANEPVNLFDMFKDLAVSKVKATSLN 1011 (1050)
T ss_pred CCCCcEEEEEeeccCCcccccccCCCccEEEEEEecc--cCcccccCCCccCcccCCcccchhhhhcccceeeeeccccc
Confidence 99999999999976532 2888987 44431 1122222 2 3999999999999999999999
Q ss_pred ccchhhHhhhcceeeeecCCCCCCCcccCCCCCCCCCceEEecCcceEEEEEEEe
Q 001813 953 ANQERAVMEKKRLVWRVEGSSKEQPTAVRGSPVDPAKLVVELAPMEIRTFVIEFY 1007 (1010)
Q Consensus 953 ~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~v~l~PmeIrTf~i~~~ 1007 (1010)
..++..+|. .+...- .. .++...|.|+||||+||+++++
T Consensus 1012 ~~~~~~~~~----~~~~~~----------~~--~~~~~~i~l~pmei~~~~~~~~ 1050 (1050)
T PLN02701 1012 LLHDDAEML----GYRKQA----------GS--AAQEGIVLISPMEIQAYKLDLR 1050 (1050)
T ss_pred ccccchhhc----cccccc----------cc--cCCccceeeccceeeeEEEecC
Confidence 998877652 111100 00 1124579999999999999874
No 3
>KOG1958 consensus Glycosyl hydrolase, family 38 - alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.4e-165 Score=1400.37 Aligned_cols=905 Identities=30% Similarity=0.477 Sum_probs=746.4
Q ss_pred cceeeecCCCCCCCCceEEEEEecccCCCccccchheeeeccCccchhhhHHHHHHHHHHHHHhCCCCeEEEechhHHHH
Q 001813 20 SKYMMYNTSAGIVPGKINVHLVPHSHDDVGWLKTVDQYYVGSNNSIQVACVQNVLDSLIPALVADKNRKFIYVEQAFFQR 99 (1010)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~V~lvpHSH~D~gWl~t~~ey~~~~~~~i~~~~v~~il~~vl~~L~~~p~~kF~~~e~~~~~~ 99 (1010)
+-.|.|+...+....+++|+||||||+||||++||++||+ .+.++||++++..|.++|++||+|+|++||.+
T Consensus 147 G~~i~yd~~~~~~~~~LkvfVvPHSHnDPGW~~Tf~~Yy~--------~~tr~Il~~~v~~L~e~~~~~FIwaEiS~~~~ 218 (1129)
T KOG1958|consen 147 GFKITYDPKKWDKEPFLKVFVVPHSHNDPGWIKTFEEYYQ--------RQTRHILNNMVNKLSEDPRMKFIWAEISFLER 218 (1129)
T ss_pred CceeecChhhcccccceEEEEeeccCCCcchhhhHHHHHH--------HHHHHHHHHHHHHhhhCcccchhhhhHHHHHH
Confidence 5567798888877777999999999999999999999998 88999999999999999999999999999999
Q ss_pred HHhcCCHHHHHHHHHHHHCCCEEEEcceeeeeccCCCChHHHHHHHHHHHHHHHHHcCCCCceeeecCCCCCchhhHHHH
Q 001813 100 WWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLL 179 (1010)
Q Consensus 100 w~~~~~p~~~~~vk~lV~~GrlE~vgGgwv~~Dea~~~~es~Irql~~G~~~l~~~fG~~p~v~w~~D~FGhs~~~p~ll 179 (1010)
||..++|+.+++||+||++||||||+|||||||||.+||.++|+|+.+||+||+.++|++|+++|.|||||||++||+||
T Consensus 219 ww~~~~~~kk~a~k~lv~~GqlEIvtGGWVMpDEAn~Hy~~~i~qliEGh~Wl~~~igv~P~s~WaiDPFG~S~TmpYLL 298 (1129)
T KOG1958|consen 219 WWDDASPTKKNAVKRLVKNGQLEIVTGGWVMPDEANSHYFAMIDQLIEGHQWLKNNIGVTPQSGWAIDPFGYSSTMPYLL 298 (1129)
T ss_pred hhhhcChHHHHHHHHHHhcCcEEEEeCccccCcccchhHHHHHHHHhhhhhHHhccCCCCCCcccccCCCCCCcchHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCcEEEEeecCHHhHHHhhccCceeEEEeeCCCCCCCCceeEeeCCC-CCCCC---------CCCCccccCC----
Q 001813 180 SAEVGFDFLFFARIDYQDRAKRINEKTLEVVWRASKSLGSSAQIMTGISPK-NYEPP---------SDNFYFEVGD---- 245 (1010)
Q Consensus 180 ~~~~G~~~~~~~R~~~~~~~~~~~~~~~eF~W~~~d~~~~gs~i~th~~~~-~Y~~p---------~~~f~f~~~~---- 245 (1010)
+++||++++|+|+||..|+.++.+|++||+||+.|+..+.++||||+||+ +|+.| +|+|||.+++
T Consensus 299 -~~ag~~~mlIQRvHYavKk~lA~qk~leF~WRQ~wds~~~tDl~tHmMPFysYDIphTCGPdP~ICCqFDFkRmpg~~~ 377 (1129)
T KOG1958|consen 299 -RRAGFENMLIQRVHYAVKKELAQQKSLEFIWRQYWDSTGDTDLLTHMMPFYSYDIPHTCGPDPKICCQFDFKRMPGGGC 377 (1129)
T ss_pred -hhcCchhHHHHHHHHHHHHHHHHhcccceeehhhccCCCCcchheeecccccccCCCccCCCCceeeeeecccCCCCCc
Confidence 89999999999999999999999999999999999988899999999998 89776 2699999874
Q ss_pred CCCCccCCccccCCChHHHHHHHHHHHHHHhhhcCCCeEEEeecCCCCCcchHHH---HHHHHHHHHHHhcCC--CeeEE
Q 001813 246 TSPIVQDDMNLFDYNVPERVNDFVSAAIAQANITRTNHIMWTMGTDFKYQYAHTW---FRQMDKFIHYVNQDG--RVNAL 320 (1010)
Q Consensus 246 ~~~~~~~~~~~~~~nv~~~~~~~~~~~~~~~~~~~t~~il~~~G~Df~y~~a~~~---f~~~~~li~~~N~~~--~~~i~ 320 (1010)
.|||.+.+..|++.||++||+.+++||+++++.|++|.+|+|.||||+|....+| |.|+.+|+++||+.+ +++++
T Consensus 378 ~Cpw~vpP~~It~~NVa~rA~~LldQyrKkS~Lfr~nVlLiPlGDDFRy~~~~Ewd~Q~~NY~~LFD~iNs~~~~nv~aq 457 (1129)
T KOG1958|consen 378 ECPWGVPPEKITDANVAARAELLLDQYRKKSELFRTNVLLIPLGDDFRYDKITEWDQQFDNYQKLFDHINSRPLLNVQAQ 457 (1129)
T ss_pred CCCCCCCCeeechhhHHHHHHHHHHHHHHHhhhcccceEEEecCCccccCccHHHHHHHHHHHHHHHHHhcccccceeee
Confidence 3455466778999999999999999999999999999999999999999988887 999999999999864 78899
Q ss_pred EcChhhhHHHHHhc----C---CCCCCccCCCccccccCCCceeeeecccchhhHHHHHhhHHHHHHHHhhhhcc-----
Q 001813 321 YSTPSMYIDAKYAA----N---ESWPLKTDDFFPYADRENAYWTGYFTSRPALKGYVRTMSAYYLAARQLEFFKG----- 388 (1010)
Q Consensus 321 ~sT~~~Yf~al~~~----~---~~~p~~~gDf~py~~~~~~yWtG~yTSr~~~K~~~R~~e~~L~~ae~l~~l~~----- 388 (1010)
|+|++|||+++++. + ..||+++||||+|+|+.++||||||||||++|++.|.+|++||+||+++++|.
T Consensus 458 FGTlsDYF~al~k~~~e~~kg~~~FPtlSGDFFtYaDr~d~YWSGYyTSRPFyK~ldRvLeh~lR~AEIl~s~a~~~~~r 537 (1129)
T KOG1958|consen 458 FGTLSDYFDALDKAYSERGKGQEPFPTLSGDFFTYADRDDHYWSGYYTSRPFYKRLDRVLEHYLRSAEILFSLALAHAHR 537 (1129)
T ss_pred cCCHHHHHHHHHHhhccccCCCCCCcccccCceeeecccCccceeeeecchHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 99999999999875 1 34799999999999999999999999999999999999999999999998641
Q ss_pred --c--ccCC---CchHHHHHHHHhhhccccccCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC-CCCCCCCcC
Q 001813 389 --R--NEVG---LSTDSLADALALVQHHDAVSGTEKQHVADDYAKRLSIGYTEAEKVVAASLACLTEFSK-NGCVNPITN 460 (1010)
Q Consensus 389 --~--~~~~---~~~~~~w~~l~~~QhHDaItGTs~~~V~~dy~~rl~~a~~~~~~~~~~~l~~L~~~~~-~~~~~~~~~ 460 (1010)
. ..+. ..+..|||+|+++|||||||||||++|+.||..||..++..++.++.+++..|+.... ++...+...
T Consensus 538 ~~~~~r~~~~~~~~L~~ARRnL~LFQHHDaITGTaK~~Vv~DYg~rl~~Sl~~~~~v~~~~~~~Ll~~~~~~y~~~~~~~ 617 (1129)
T KOG1958|consen 538 VGLAQRIEESNYELLTAARRNLGLFQHHDAITGTAKDAVVVDYGQRLHESLVNLQIVLENALELLLGKDSETYNSDPSHS 617 (1129)
T ss_pred hhhhhhcchhHHHHHHHHHHhhhhhhcccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccCCCCC
Confidence 1 1112 3467899999999999999999999999999999999999999999999999987532 222222211
Q ss_pred ccccccc--ccccCCC-CccccCCCCceEEEEEcCCCceEeEEEEEEEeCCeEEEEcCCCCEEEEEEeeccccccccccc
Q 001813 461 FQQCPLL--NISYCPP-SEVDLSSGKSLVVVVYNPLGWKREDIIRIPVINENVTVKDSKGKVIESQLLPLLKDSMSLRNS 537 (1010)
Q Consensus 461 ~~~~~~l--n~s~~~~-~~~~l~~~~~~~v~vfNpl~~~r~~~V~i~v~~~~~~v~d~~g~~v~~Qi~~~~~~~~~~~~~ 537 (1010)
+-+.... ..+.-|. +-..+ ++.+..|++||||.++|.++|+|.|+.+.+.|.+..|++|++|+.|+|......
T Consensus 618 ~~emd~~r~~~~~~pek~~~~~-~~~~~~vvlfN~l~q~R~evv~i~V~sp~V~V~~d~g~pv~~Qispvw~~~~tk--- 693 (1129)
T KOG1958|consen 618 FIEMDDIRDSEDSLPEKTVIGL-SSGPRSVVLFNPLEQEREEVVTIRVNSPEVSVLDDGGVPVEAQISPVWQDTKTK--- 693 (1129)
T ss_pred ceehhhcccCCCcCcccceeec-cCCCceEEEeccchhhhhccEEEEecCCeeEEEcCCCceeeEeeccceeccccc---
Confidence 1111100 1111111 00112 234478999999999999999999999999999999999999999999622110
Q ss_pred ccccccCCCCCCCCcEEEEEEEecCCCceEEEEEEeCCcccCccccce--------eeecc--ccCCCceEEcCCeEEEE
Q 001813 538 YSTAYLGKSTNVTPSYWLAFSASVPPLGFNTYIISSAKQAASHSGMRT--------VYKSQ--IRQNDTIEVGPGNLKLL 607 (1010)
Q Consensus 538 ~~~~~~~~~~~~~~~~~l~f~~~vPplG~~~~~v~~~~~~~~~~~~s~--------~~~~~--~~~~~~~~ieN~~~~v~ 607 (1010)
......|+|+|.+.|||||..+|++..+..+......++ +.... ....+...++|++..|.
T Consensus 694 ---------~~~~~~~~l~f~a~vpplgl~v~~~~~~~~~~~~~l~s~~~~~~~~~~~s~~~~~~~~~~s~~~~~~~~l~ 764 (1129)
T KOG1958|consen 694 ---------TIKPGSYRLSFKATVPPLGLMVLRIDSGGLTEHAKLPSKDTSFPAWDLGSSSTIGDSRELSTLRNEYFELR 764 (1129)
T ss_pred ---------eeecceeEEEEEEecccceeeEEEeeccCcccccccccCCCCcccCCCccceeecCccccceeeccceeEE
Confidence 011247999999999999999999987633211111100 00000 11122358999999999
Q ss_pred EeCCCCeEEEEEecCCCcEEEEEEEEEEeecCCCCCCCCCCcceeEeCCCCC-ccCCCCCceEEEEeCCceEEEEEEEcC
Q 001813 608 YSGKRAKLMRYINSKTSVNKLLEQSYIYYRGDDGSKDLQPSGAYIFRPNGTY-PIEPEGQLSFTILRGPLLDEVHQRINP 686 (1010)
Q Consensus 608 ~~~~~G~l~sl~dk~~g~~~~~~~~~~~Y~~~~g~~~~~~sGAY~F~P~~~~-~~~~~~~~~i~v~~Gpl~~~v~~~~~~ 686 (1010)
|++.+|+|+++..+.++....++..|..|.+..+ +..||||+|.|+|++ ++..-....|++ +|||+++|.+...+
T Consensus 765 fd~~~G~i~~~~~~~D~~~~~~q~~f~~y~~~~~---~~~sgaylf~p~G~a~~~i~~~~p~v~v-~g~L~qev~~~~~~ 840 (1129)
T KOG1958|consen 765 FDPETGTIKSINSLSDNKHFESQVSFSNYGERIS---GDESGAYLFLPDGNAKPIIELQWPHVRV-KGPLVQEVSQFLKN 840 (1129)
T ss_pred eccccchhhhhhhcccCCCcccceeecccccccc---CCCCceEEEccCCCCCCceecCCCeEEe-ecceeeeeccccch
Confidence 9999999999888878888888888988875544 667999999999985 543333346666 99999999987642
Q ss_pred ---eEEEEEEEEcCCCceEEEEEECcccccCCCCcEEEEEEEeeccCCcEEEEcCCcccceecccccccCcccccccccc
Q 001813 687 ---WIYQVTRVYKGKDHAEIEFTVGPIPIDDGIGKEVVTQITSNMISNKTFYTDSSGRDFIERIRDYRKDWNLEVNQPIA 763 (1010)
Q Consensus 687 ---~i~~~irLy~~~~~ie~e~~v~~i~~~~~~~~ev~~~f~t~i~s~~~fyTDsnG~~~i~R~~~~r~~w~~~~~~pv~ 763 (1010)
...|.+++|.|. .+|++..|+ +.+..+.|++|||.|++++.+.||||+||+||++|.+. .+.|++
T Consensus 841 v~~~~~~~~~~~~G~-~vei~~~vd---i~~~~n~Ela~R~st~vds~~~FyTDlnG~Q~~kR~~~--------~KlPlQ 908 (1129)
T KOG1958|consen 841 VLHRLSQNVRGYSGE-EVEISNSVD---IRKEDNTELAMRFSTDVDSGDLFYTDLNGMQMIKRRRL--------DKLPLQ 908 (1129)
T ss_pred HHHhchhheeccCCc-ceeeeceee---cccccchhhhhhhhhcccCCceeeeccchhhhhhhhhc--------ccCccc
Confidence 233788999887 688887764 55578999999999999999999999999999999865 489999
Q ss_pred cceEeccceeeEEecCcceEEEeeccccccccCCCeEEEEEEeeecccCccCccccccccccccccccCeEEeeEEEEEe
Q 001813 764 GNYYPVNLGIYMKDNSSELSILVDRSVGGSSIADGQLELMLHRRLVADDNRGVSEALNETVCVFDKCEGLTIIGKYYLRI 843 (1010)
Q Consensus 764 ~NyYP~~s~i~i~D~~~~ltvl~dr~~G~ssl~~G~iElml~Rr~~~DD~rGvge~l~e~~~~~~~~~gl~~~~~~~l~l 843 (1010)
+|||||++++||+|.+.+|++++.+++|++||.+|+||||++||+.+||+||||+|+.|+ .++..+|+|++
T Consensus 909 aNyYPmpt~a~Iq~~~~RlsihS~q~lGvssL~sG~iEIm~DRrL~~DD~rGLgqGv~DN---------k~t~~~frlv~ 979 (1129)
T KOG1958|consen 909 ANYYPMPTAAFIQDAKQRLSIHSAQSLGVSSLESGQIEIMLDRRLNQDDGRGLGQGVIDN---------KPTDMKFRLVL 979 (1129)
T ss_pred ceeecccceeeeecCCceEEEEeecccCccccccceEEEEecccccCCCCcccccccccc---------chhhheeeeee
Confidence 999999999999999999999999999999999999999999999999999999999987 46788999999
Q ss_pred cCccchhh------------hcccchhhhccCceeeecccCCCccccccccccccCccccCCCCcceEEEeeecCCC---
Q 001813 844 DPVGEAAK------------WRRSFGQEIYSPFLLAFTEQDGDHWANSHLATYSAMDTTYVLPDNVALITLQELDSG--- 908 (1010)
Q Consensus 844 ~~~~~~~~------------~~r~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lp~~vhlltl~~~~~~--- 908 (1010)
++.+.... ..+...+.+++|+..++.+... +.. ....|.++.. +||||+||+|++++.+.
T Consensus 980 e~~~s~~~p~e~~~~~~ps~~ah~a~~~l~yP~~~f~~~~pk--~i~-~~g~~~~~~~--~lpcDl~lvt~rtl~~~~~~ 1054 (1129)
T KOG1958|consen 980 ESLNSAQDPTENSRVSYPSLAAHLASQSLNYPLMKFIYAEPK--KIE-DQGIFEPLNL--SLPCDLHLVTFRTLESSKAA 1054 (1129)
T ss_pred cccccccCchhcCCCCChhhhhhcccceecCCchhhcccCCC--Chh-hccccccccC--CCccceeEEEeeeccCcccc
Confidence 98764221 1123567889999887743321 111 1223555543 89999999999999754
Q ss_pred -----cEEEEEeccccccc-cCCCcceeeeeccccCCcCccceEEeccccccchhhHhhhcceeeeecCCCCCCCcccCC
Q 001813 909 -----KILLRLAHLYEIEE-DTDLSVMSSVELKKVFPKKKISKVTEMNLSANQERAVMEKKRLVWRVEGSSKEQPTAVRG 982 (1010)
Q Consensus 909 -----~illRl~~l~~~~~-~~~~s~~~~v~l~~lf~~~~~~~i~etsLt~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 982 (1010)
.||+|.+ .+|+. ....+...++++.+|+.. +.+++.|+|++.+.....
T Consensus 1055 ~~~~~lil~R~~--~~c~~~~~g~c~~~ki~~~~ll~~--~~~v~~tsLs~l~~~~~~---------------------- 1108 (1129)
T KOG1958|consen 1055 EKRAALILHRHA--TDCRSQKKGTCGQLKISVMDLLIK--AKSVKKTSLSLLQEVGGI---------------------- 1108 (1129)
T ss_pred cccceeeeeecc--cccccccccccccccCcHHHHHHH--HHhhchhhHHhhhhcccC----------------------
Confidence 3788865 55532 111123568888899887 889999999998665432
Q ss_pred CCCCCCCceEEecCcceEEEEEEE
Q 001813 983 SPVDPAKLVVELAPMEIRTFVIEF 1006 (1010)
Q Consensus 983 ~~~~~~~~~v~l~PmeIrTf~i~~ 1006 (1010)
.+ .....++||||++|++.+
T Consensus 1109 ~~----~~~~~~~pme~~~~l~~~ 1128 (1129)
T KOG1958|consen 1109 IG----VEEQELSPMEISAFLTSL 1128 (1129)
T ss_pred CC----cccccccccccccccccc
Confidence 11 114557999999998764
No 4
>PRK09819 alpha-mannosidase; Provisional
Probab=100.00 E-value=3.6e-106 Score=1006.90 Aligned_cols=824 Identities=15% Similarity=0.180 Sum_probs=607.1
Q ss_pred ceEEEEEecccCCCccccchheeeeccCccchhhhHHHHHHHHHHHHHhCCCCeEEE-echhHHHHHHhcCCHHHHHHHH
Q 001813 35 KINVHLVPHSHDDVGWLKTVDQYYVGSNNSIQVACVQNVLDSLIPALVADKNRKFIY-VEQAFFQRWWRDQSEEVQNVVK 113 (1010)
Q Consensus 35 ~~~V~lvpHSH~D~gWl~t~~ey~~~~~~~i~~~~v~~il~~vl~~L~~~p~~kF~~-~e~~~~~~w~~~~~p~~~~~vk 113 (1010)
+++||+|||||||+|||||++++. .++.++|++++++|+++|+++|.+ +++..+.+||.+.+|+++++||
T Consensus 3 ~~~v~~v~HtH~D~~Wl~~~~~~~---------~~~~~~~~~vl~lle~~p~~~f~~~d~q~~~l~~~~~~~Pe~~~~ik 73 (875)
T PRK09819 3 KSKVHIVPHMHWDREWYFTTERSR---------ILLVNNMEEILDRLEQDNDYKYYVLDGQTSLLEDYLAVKPEDKERVK 73 (875)
T ss_pred ceEEEEeCCCCCChhhcCChHHhH---------HHHHHHHHHHHHHHHhCCCcceEEEchhHHHHHHHHHhChHHHHHHH
Confidence 478999999999999999999986 678899999999999999999754 4444445666688999999999
Q ss_pred HHHHCCCEEEEcceeeeeccCCCChHHHHHHHHHHHHHHHHHcCCCCceeeecCCCCCchhhHHHHHhhcCCcEEEEeec
Q 001813 114 QLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFARI 193 (1010)
Q Consensus 114 ~lV~~GrlE~vgGgwv~~Dea~~~~es~Irql~~G~~~l~~~fG~~p~v~w~~D~FGhs~~~p~ll~~~~G~~~~~~~R~ 193 (1010)
+||++||| ++||||||+||+++||||+||||++||+|+ ++||..|++||+|||||||++||||| +++||+++++||+
T Consensus 74 ~lV~~Grl-~~G~W~v~~D~~l~sgEsliRqll~G~~~~-~~fG~~~~vgwlpD~FG~s~~lPqIl-~~~Gi~~~~~wr~ 150 (875)
T PRK09819 74 KLVQAGKL-IIGPWYTQTDQLVVSGESIVRNLLYGIRDC-REFGEPMKIGYLPDSFGQSGQMPQIY-NGFGITRTLFWRG 150 (875)
T ss_pred HHHHcCCE-eECcEEeecccccCCHHHHHHHHHHHHHHH-HHcCCCCceeeecCCCCCcHHHHHHH-HhCCCCeEEEEec
Confidence 99999999 677777999999999999999999999998 79999999999999999999999999 9999999999997
Q ss_pred CHHhHHHhhccCceeEEEeeCCCCCCCCceeEeeCCCCCCCCCCCCccccCCCCCCccCCccccCCChHHHHHHHHHHHH
Q 001813 194 DYQDRAKRINEKTLEVVWRASKSLGSSAQIMTGISPKNYEPPSDNFYFEVGDTSPIVQDDMNLFDYNVPERVNDFVSAAI 273 (1010)
Q Consensus 194 ~~~~~~~~~~~~~~eF~W~~~d~~~~gs~i~th~~~~~Y~~p~~~f~f~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~ 273 (1010)
..+ +......+|+|+|+| ||+||||++|.+|+.+ ..+ | ....+++++++.+++.++
T Consensus 151 ~~~----~~~~~~~~F~W~g~D----Gs~V~t~~~~~~Y~~g-~~~---------~------~~~~~~~~~~~~~~~~~~ 206 (875)
T PRK09819 151 VSD----RHGTDKTEFLWQSDD----GSEVLAQQLPLGYAIG-KYL---------P------EDEEELKKRLDEYFGVLE 206 (875)
T ss_pred ccc----cccCCCceEEEECCC----CCeEEEEECccccccC-CCC---------C------cCHHHHHHHHHHHHHHHh
Confidence 532 111246789999999 9999999999999865 111 0 112366777777776655
Q ss_pred HHhhhcCCCeEEEeecCCCCCcchHHHHHHHHHHHHHHhcC-CCeeEEEcChhhhHHHHHhcCCCCCCccCCCc-ccccc
Q 001813 274 AQANITRTNHIMWTMGTDFKYQYAHTWFRQMDKFIHYVNQD-GRVNALYSTPSMYIDAKYAANESWPLKTDDFF-PYADR 351 (1010)
Q Consensus 274 ~~~~~~~t~~il~~~G~Df~y~~a~~~f~~~~~li~~~N~~-~~~~i~~sT~~~Yf~al~~~~~~~p~~~gDf~-py~~~ 351 (1010)
+. ..++++|+|+|+|+.+.. ++|.++|+.+|+. +.+++++||+++||++++++...||+++|||+ |+..+
T Consensus 207 ~~---~~~~~~l~~~G~d~~p~~-----~~~~e~i~~~~~~~~~~~~~~st~~~yf~~l~~~~~~lp~~~GEl~~~~y~~ 278 (875)
T PRK09819 207 KK---SSTKNILLPNGHDQMPLQ-----KNLFEVMDKLNEIYPEREFVISRFENVFEKLEKQRDNLPTLKGEFIDGKYMR 278 (875)
T ss_pred hc---CCCCcEEEecCCCCCccc-----ccHHHHHHHHHhhCCCCcEEECCHHHHHHHHHhhcCCCCeeeeecCCCcccc
Confidence 54 578999999999997765 5677888888875 46899999999999999987788999999998 43332
Q ss_pred CCCceeeeecccchhhHHHHHhhHHHHH-HHHhhhhc---ccccCCCchHHHHHHHHhhhccccccCccchhhHHHHHHH
Q 001813 352 ENAYWTGYFTSRPALKGYVRTMSAYYLA-ARQLEFFK---GRNEVGLSTDSLADALALVQHHDAVSGTEKQHVADDYAKR 427 (1010)
Q Consensus 352 ~~~yWtG~yTSr~~~K~~~R~~e~~L~~-ae~l~~l~---~~~~~~~~~~~~w~~l~~~QhHDaItGTs~~~V~~dy~~r 427 (1010)
+.+||||||+.+|++||++|++|+. +|.|++++ |..|+...++++|+.|+++||||+||||++++|++|+..|
T Consensus 279 ---~HrG~~TSr~~iK~~nr~~E~~L~~~~E~l~~la~~~g~~yp~~~l~~~Wk~ll~nq~HD~i~G~sid~V~~d~~~r 355 (875)
T PRK09819 279 ---VHRSIFSTRMDIKIANARIENKIVNVLEPLASIAYSLGFEYPHGLLEKIWKEMFKNHAHDSIGCCCSDTVHRDIVAR 355 (875)
T ss_pred ---ccCCccccHHHHHHHHHHHHHHHHHHhchHHHHHHHcCCCCCHHHHHHHHHHHHHhcCCCcccccCChHHHHHHHHH
Confidence 3379999999999999999999985 89998885 4567888899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCCCCCCCCcCcccccccccccCCCCccccCCCCceEEEEEcCCCceEeEEEEEEEe-
Q 001813 428 LSIGYTEAEKVVAASLACLTEFSKNGCVNPITNFQQCPLLNISYCPPSEVDLSSGKSLVVVVYNPLGWKREDIIRIPVI- 506 (1010)
Q Consensus 428 l~~a~~~~~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~ln~s~~~~~~~~l~~~~~~~v~vfNpl~~~r~~~V~i~v~- 506 (1010)
+.++.+.++.+++.+++.|+.... .++...++||||++|+|+++|++++.
T Consensus 356 ~~~~~~~~~~l~~~~l~~l~~~i~-----------------------------~~~~~~~~vfN~l~~~r~~~v~i~~~~ 406 (875)
T PRK09819 356 YKLAEDLADNLLDFYMRKIADNMP-----------------------------QSDADKLTVFNLLPYEREEVINTTVYL 406 (875)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC-----------------------------cCCCCEEEEEcCCCccceeEEEEEEEe
Confidence 999999999999999999986421 13356899999999999999998774
Q ss_pred -CCeEEEEcCCCCEEEEEEeecccccccccccccccccCCCCCCCCcEEEEEEE-ecCCCceEEEEEEeCCcccCccccc
Q 001813 507 -NENVTVKDSKGKVIESQLLPLLKDSMSLRNSYSTAYLGKSTNVTPSYWLAFSA-SVPPLGFNTYIISSAKQAASHSGMR 584 (1010)
Q Consensus 507 -~~~~~v~d~~g~~v~~Qi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~f~~-~vPplG~~~~~v~~~~~~~~~~~~s 584 (1010)
...+.+.|.+|+++++|++..................+. .....+.+.|.+ .||||||++|.+...+......
T Consensus 407 ~~~~~~~~d~~g~~v~~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~f~~~~vP~lG~~~~~i~~~~~~~~~~--- 481 (875)
T PRK09819 407 PASQFTLRDDRGNPLPYTIREKRDIDPGLLDRQIVHYGNY--DPFMEFDIQINVQILPAMGYRTLYIELNEEGNVIE--- 481 (875)
T ss_pred ccCCEEEECCCCCEeeEEEeeccccccchhhcceeccCCC--CceEEEEEEEEECCCCCcccEEEEEEeCCcccccc---
Confidence 577899999999999999865432111100000000000 001246788874 8999999999987643321100
Q ss_pred eeeeccccCCCceEEcCCeEEEEEeCCCCeEEEEEecCCCcEEEEEEEEEEeecCCCCCCCCCCcceeEeCCCCC-ccCC
Q 001813 585 TVYKSQIRQNDTIEVGPGNLKLLYSGKRAKLMRYINSKTSVNKLLEQSYIYYRGDDGSKDLQPSGAYIFRPNGTY-PIEP 663 (1010)
Q Consensus 585 ~~~~~~~~~~~~~~ieN~~~~v~~~~~~G~l~sl~dk~~g~~~~~~~~~~~Y~~~~g~~~~~~sGAY~F~P~~~~-~~~~ 663 (1010)
........|||++|+|+|+ .+|.| +|+||.+|+++. ++..|.+. ++.++||+|.|.... .+..
T Consensus 482 ------~~~~~~~~ieN~~~~v~i~-~~G~l-~l~dk~~gr~~~---~~~~~~d~-----~d~gD~yd~~p~~~d~~~~~ 545 (875)
T PRK09819 482 ------PKSSAEGIIENEFYQITLN-ENGTL-TIVDKKSGKTYD---RQLIIEEN-----GDDGDEYDYSPPREDWVITS 545 (875)
T ss_pred ------ccccccceEecCcEEEEEe-cCCcE-EEEECCCCcEEe---ceEEEEec-----CcCCCCcccCCCCCCCEEec
Confidence 1223457899999999999 78999 599999999874 44455422 456789999987643 2222
Q ss_pred CC-CceEEEEeCCceEEEEEEE------------------cCeEEEEEEEEcCCCceEEEEEECcccccCCCCcEEEEEE
Q 001813 664 EG-QLSFTILRGPLLDEVHQRI------------------NPWIYQVTRVYKGKDHAEIEFTVGPIPIDDGIGKEVVTQI 724 (1010)
Q Consensus 664 ~~-~~~i~v~~Gpl~~~v~~~~------------------~~~i~~~irLy~~~~~ie~e~~v~~i~~~~~~~~ev~~~f 724 (1010)
.. ...+.++.||+.+++++.+ .+.++|+++|++++++|+|+++|++. ..+|.+++.|
T Consensus 546 ~~~~~~~~v~~~~~~~~~~i~~~~~~p~~~~~r~~~~~~~~~~i~~~i~L~~~s~~i~~~~~vdw~----~~~~~Lrv~f 621 (875)
T PRK09819 546 AEAVPSVEISHSAWQSRAVIRYRLAVPKNLEERAAGQKTGRMPVKLVVTLSKNSRRIDFDVNLDNQ----ADDHRLRVLF 621 (875)
T ss_pred cCCcceEEEEEcCCeEEEEEEEEEeCCcChhhHhhccccceEEEEEEEEEecCCCEEEEEEEEecc----ccceEEEEEc
Confidence 22 3467788899988877653 24788999999999999999999765 5789999999
Q ss_pred EeeccCCcEEEEcCCcccceeccccc--ccCcccccccccccceEeccceeeEEecCcceEEEeeccccccccCC--CeE
Q 001813 725 TSNMISNKTFYTDSSGRDFIERIRDY--RKDWNLEVNQPIAGNYYPVNLGIYMKDNSSELSILVDRSVGGSSIAD--GQL 800 (1010)
Q Consensus 725 ~t~i~s~~~fyTDsnG~~~i~R~~~~--r~~w~~~~~~pv~~NyYP~~s~i~i~D~~~~ltvl~dr~~G~ssl~~--G~i 800 (1010)
+++|.+...+| +.+|++++|+++. ..+|+....+...-+.|||.+|+.+.|++.+++|+||+.+|++...+ ++|
T Consensus 622 p~~i~~~~~~~--d~~fG~i~Rp~~~~~~~~W~~~~~~e~p~~~~~~~~~v~ls~~~~Gvall~dg~~ey~v~g~~~~~i 699 (875)
T PRK09819 622 PTEIASKFSLA--DQQFGSITRPVNDPAMDVWEQEGWQEAPISIEPMQSFVALHDERHGVAVFTEGVREYEIIGENYDTI 699 (875)
T ss_pred cCCCCCCceEc--CCCceEEECCCcCccccccccccceeCCCCChhhhceEEEecCCceEEEECCCcceEEEecCCCCeE
Confidence 99999977666 5999999999754 35887543322223489999999999999999999999999975543 389
Q ss_pred EEEEEeeecc---cC-----ccCccccccccccccccccCeEEeeEEEEEecCccch--hhhcccchhhhccCceeeecc
Q 001813 801 ELMLHRRLVA---DD-----NRGVSEALNETVCVFDKCEGLTIIGKYYLRIDPVGEA--AKWRRSFGQEIYSPFLLAFTE 870 (1010)
Q Consensus 801 Elml~Rr~~~---DD-----~rGvge~l~e~~~~~~~~~gl~~~~~~~l~l~~~~~~--~~~~r~~~~~~~~p~~~~~~~ 870 (1010)
.|+|.|+..+ +| +|.-|..+-+.. .+|.|. ++|.+.|.+.... .....+.++.++.|+..+-..
T Consensus 700 ~LTLlRs~g~lgk~~l~~rpgr~sG~~~ptP~---aq~~G~---h~f~y~l~ph~g~~~~~~~~~~a~~~n~p~~~~~~~ 773 (875)
T PRK09819 700 ALTLFRGVGLLGKEDLLYRPGRPSGIKIPTPD---SQLLGE---LSFRFSLTSYEGTFDEAGVAQQAKEYLTPVQCYNKI 773 (875)
T ss_pred EEEeecccCccCCCccccCCCcccCCccCCCh---HHhcCc---eEEEEEEEEccCCcchHHHHHHHHHhccCcceeecc
Confidence 9999999743 11 232232221111 123342 2344333322211 011234678888888755311
Q ss_pred cCC----CccccccccccccCccccCCCCcceEEEeeecCCC-cEEEEEeccccccccCCCcceeeeeccccCCcCccce
Q 001813 871 QDG----DHWANSHLATYSAMDTTYVLPDNVALITLQELDSG-KILLRLAHLYEIEEDTDLSVMSSVELKKVFPKKKISK 945 (1010)
Q Consensus 871 ~~~----~~~~~~~~~~~~~l~~~~~lp~~vhlltl~~~~~~-~illRl~~l~~~~~~~~~s~~~~v~l~~lf~~~~~~~ 945 (1010)
... .........+++.+. -.+.++.+-++|+..++ .++||+-+ ...... ..+.+.+ ...+..
T Consensus 774 ~~~~~~~~~~~~~~~~~~s~~~---~~~~~i~~sa~K~aed~~~~ilRlyn---~~~~~~--~~~~l~~-----~~~~~~ 840 (875)
T PRK09819 774 PFLNMRLNDEEFTLPESYSLLK---MPPDGAVLSAVKKAEDRDGLILRFFN---PAESKT--CDATVAF-----SKEVKS 840 (875)
T ss_pred cccccccCcccCCCCcccccee---eCCCCEEEEEEEEeccCCCEEEEEeC---CCCCcc--cccccee-----ccchhh
Confidence 100 000001112233321 12458999999998765 49999554 311110 0112211 234566
Q ss_pred EEeccccccchhhHhhhcceeeeecCCCCCCCcccCCCCCCCCCceEEecCcceEEEEEE
Q 001813 946 VTEMNLSANQERAVMEKKRLVWRVEGSSKEQPTAVRGSPVDPAKLVVELAPMEIRTFVIE 1005 (1010)
Q Consensus 946 i~etsLt~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~v~l~PmeIrTf~i~ 1005 (1010)
+.|++|..... .+. .+..+. .++|.|.||+|++|.
T Consensus 841 ~~~~~l~E~~~-~~~-----------------------~~~~~~-~~~~~p~eI~T~~i~ 875 (875)
T PRK09819 841 LDETMLDEKIT-TEE-----------------------NQGSNL-SGELKPCQVQTFLVK 875 (875)
T ss_pred eeecccccccc-ccc-----------------------cccccc-cccccCCeeEEEEeC
Confidence 77888876421 100 000111 257999999999984
No 5
>KOG4342 consensus Alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.1e-79 Score=672.25 Aligned_cols=762 Identities=16% Similarity=0.220 Sum_probs=564.8
Q ss_pred CCceEEEEEecccCCCccccchheeeeccCccchhhhHHHHHHHHHHHHHhCCCCeEEEechhHHHHHHhcCCHHHHHHH
Q 001813 33 PGKINVHLVPHSHDDVGWLKTVDQYYVGSNNSIQVACVQNVLDSLIPALVADKNRKFIYVEQAFFQRWWRDQSEEVQNVV 112 (1010)
Q Consensus 33 ~~~~~V~lvpHSH~D~gWl~t~~ey~~~~~~~i~~~~v~~il~~vl~~L~~~p~~kF~~~e~~~~~~w~~~~~p~~~~~v 112 (1010)
...-+||.|+|.|+|.+|||+|.|.. +++.+-..+.+..|+++|+++|+.++... .+|.++.+|+.++++
T Consensus 278 es~~nv~aiGhCHIDTAWLWPFaETr---------RKivRSW~tq~~lMdR~PEy~FvcSQAqQ-~~WlkedhP~~f~kl 347 (1078)
T KOG4342|consen 278 ESQHNVHAIGHCHIDTAWLWPFAETR---------RKIVRSWVTQLQLMDRNPEYIFVCSQAQQ-LEWLKEDHPGLFSKL 347 (1078)
T ss_pred ccccceeeeccccccchhhcChHHHH---------HHHHHHHHHHHhHHhhCcceeEehhhHHH-HHHHhhhChhHHHHH
Confidence 34689999999999999999999998 68888899999999999999999875444 489999999999999
Q ss_pred HHHHHCCCEEEEcceeeeeccCCCChHHHHHHHHHHHHHHHHHcCCCCceeeecCCCCCchhhHHHHHhhcCCcEEEEee
Q 001813 113 KQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFAR 192 (1010)
Q Consensus 113 k~lV~~GrlE~vgGgwv~~Dea~~~~es~Irql~~G~~~l~~~fG~~p~v~w~~D~FGhs~~~p~ll~~~~G~~~~~~~R 192 (1010)
++.+..||+-.|||.||++|.++|+||||+||++.|++|+.++||...+.-|+||+||+|+|||||. +.+||+.|++++
T Consensus 348 ~e~~~q~qF~pvGGtWVE~DtNiPsGEslvRQFl~GQ~FFlkeFG~~c~~FWLPDTFGYSsQ~PQic-rlcGidrFLTQK 426 (1078)
T KOG4342|consen 348 QEFACQGQFVPVGGTWVEMDTNIPSGESLVRQFLQGQNFFLKEFGKMCSEFWLPDTFGYSSQLPQIC-RLCGIDRFLTQK 426 (1078)
T ss_pred HHHHhcCceeeccceEEecCCCCCChHHHHHHHHhhhhHHHHHhhhhhcceeccccccccchhhHHH-HhhcHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred cCHHhHHHhhccCceeEEEeeCCCCCCCCceeEeeCCC-CCCCCCCCCccccCCCCCCccCCccccCCChHHHHHHHHHH
Q 001813 193 IDYQDRAKRINEKTLEVVWRASKSLGSSAQIMTGISPK-NYEPPSDNFYFEVGDTSPIVQDDMNLFDYNVPERVNDFVSA 271 (1010)
Q Consensus 193 ~~~~~~~~~~~~~~~eF~W~~~d~~~~gs~i~th~~~~-~Y~~p~~~f~f~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~ 271 (1010)
++|+..+.+++.. |.|.|.| ||+|++|+-|. .|... -|+ ++.+..
T Consensus 427 LSWNniNSFPhsT---FnW~glD----GSqvl~HmPPgntYtad-----------------------~~v----~dVL~t 472 (1078)
T KOG4342|consen 427 LSWNNINSFPHST---FNWEGLD----GSQVLVHMPPGNTYTAD-----------------------GSV----EDVLKT 472 (1078)
T ss_pred ccccccCcCCccc---eeeeecc----CceEEEecCCCCccccc-----------------------CcH----HHHHHH
Confidence 9999999998876 9999999 99999998775 56543 132 334444
Q ss_pred HHHHhhhcCCCeEEEeecCCCCCc-chHHHHHHHHHHHHHHhcCC-CeeEEEc-ChhhhHHHHHhc---CCCCCCccCCC
Q 001813 272 AIAQANITRTNHIMWTMGTDFKYQ-YAHTWFRQMDKFIHYVNQDG-RVNALYS-TPSMYIDAKYAA---NESWPLKTDDF 345 (1010)
Q Consensus 272 ~~~~~~~~~t~~il~~~G~Df~y~-~a~~~f~~~~~li~~~N~~~-~~~i~~s-T~~~Yf~al~~~---~~~~p~~~gDf 345 (1010)
+.+.....+.++=|+.+|-....+ ..+++.+.|.++...-|.++ -++++.+ |+++||+++.+. +..+|+|.||+
T Consensus 473 v~qnk~~~~~~~gl~lfG~GDGGGGPT~eML~klrR~r~~~Nt~G~lP~vqlg~tvdeffd~ilkrtnqg~~LptW~GEL 552 (1078)
T KOG4342|consen 473 VAQNKDKGRANHGLFLFGFGDGGGGPTQEMLDKLRRIRSLSNTDGVLPRVQLGITVDEFFDAILKRTNQGHDLPTWVGEL 552 (1078)
T ss_pred HHhcCCccccCcceEEEEecCCCCCCcHHHHHHHHHhhcccccCCcccceeecCCHHHHHHHHHhhhccCCcccccchhe
Confidence 444445556666666776433332 22333333333222444455 6899999 999999999876 35699999995
Q ss_pred -ccccccCCCceeeeecccchhhHHHHHhhHHHHHHHHhhhhccc-----ccCCCchHHHHHHHHhhhccccccCccchh
Q 001813 346 -FPYADRENAYWTGYFTSRPALKGYVRTMSAYYLAARQLEFFKGR-----NEVGLSTDSLADALALVQHHDAVSGTEKQH 419 (1010)
Q Consensus 346 -~py~~~~~~yWtG~yTSr~~~K~~~R~~e~~L~~ae~l~~l~~~-----~~~~~~~~~~w~~l~~~QhHDaItGTs~~~ 419 (1010)
|++|+ |.|||++.+|+++|.+|..|+.+|.+++++.. .||.+.++.+|+.++++||||.+||++++.
T Consensus 553 yfEfHr-------GTYTtqAq~KKlmR~~Ei~LHD~E~~sslas~~s~dy~YP~~qlq~LWr~~LLcQFHDVlpGSCIeM 625 (1078)
T KOG4342|consen 553 YFEFHR-------GTYTTQAQIKKLMRECEIILHDVELLSSLASARSADYLYPAAQLQHLWRLLLLCQFHDVLPGSCIEM 625 (1078)
T ss_pred EEEEec-------CceeeHHHHHHHHHHHHHHhhhHHHHHHHHHhhcccccCcHHHHHHHHHHHHHHHhcccCCcHHHHH
Confidence 58886 99999999999999999999999999998643 356778999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCcCcccccccccccCCCCccccCCCCceEEEEEcCCCceEeE
Q 001813 420 VADDYAKRLSIGYTEAEKVVAASLACLTEFSKNGCVNPITNFQQCPLLNISYCPPSEVDLSSGKSLVVVVYNPLGWKRED 499 (1010)
Q Consensus 420 V~~dy~~rl~~a~~~~~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~ln~s~~~~~~~~l~~~~~~~v~vfNpl~~~r~~ 499 (1010)
|++|.+-.+......++.+++.+++.|.... .....+++.|+|+|.|.+
T Consensus 626 VykeA~p~~~~v~k~~~tLl~~a~~~L~as~-------------------------------s~ke~L~~~nTLpW~~~~ 674 (1078)
T KOG4342|consen 626 VYKEAMPHYEDVRKHGNTLLSAAAAALCASE-------------------------------SGKEGLLIVNTLPWKRIE 674 (1078)
T ss_pred HHHhhhhHHHHHHHhhHHHHHHHHHHHhcCC-------------------------------CCccceEEEeccccceee
Confidence 9999999999999999999999999885321 123468999999999999
Q ss_pred EEEEEEeCCeEEEEcCCCCEEEEEEeecccccccccccccccccCCCCCCCCcEEEEEEEecCCCceEEEEEEeCCcccC
Q 001813 500 IIRIPVINENVTVKDSKGKVIESQLLPLLKDSMSLRNSYSTAYLGKSTNVTPSYWLAFSASVPPLGFNTYIISSAKQAAS 579 (1010)
Q Consensus 500 ~V~i~v~~~~~~v~d~~g~~v~~Qi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~f~~~vPplG~~~~~v~~~~~~~~ 579 (1010)
++.++-+..... .+ ..++|.+|++... ..
T Consensus 675 v~~~~kp~k~~~-----------------------------------------~e---~c~~~g~~ta~vt-------~~ 703 (1078)
T KOG4342|consen 675 VMALPKPGKAHS-----------------------------------------LE---LCTVPGMGTAPVT-------PP 703 (1078)
T ss_pred eecccCCCCcee-----------------------------------------EE---EeccCCccccCCC-------CC
Confidence 887654321110 01 1356666554311 00
Q ss_pred ccccceeeeccccCCCceEEcCCeEEEEEeCCCCeEEEEEecCCCcEEE---------EEEEEEEeecCCCCCCCCCCcc
Q 001813 580 HSGMRTVYKSQIRQNDTIEVGPGNLKLLYSGKRAKLMRYINSKTSVNKL---------LEQSYIYYRGDDGSKDLQPSGA 650 (1010)
Q Consensus 580 ~~~~s~~~~~~~~~~~~~~ieN~~~~v~~~~~~G~l~sl~dk~~g~~~~---------~~~~~~~Y~~~~g~~~~~~sGA 650 (1010)
.+++..- ...+.++|.|+.+||.++ .+|.|+|++|...|+++. -.++|..|.+- +-.|.|
T Consensus 704 ---~~p~~~y--q~Dd~~~L~Ng~lrV~i~-p~G~itSl~d~~~grE~ld~~~Grn~~GaNQfVlfdD~-----PL~WqA 772 (1078)
T KOG4342|consen 704 ---TSPVFVY--QTDDSVTLDNGILRVKID-PTGRITSLVDVASGREALDTAEGRNAVGANQFVLFDDV-----PLYWQA 772 (1078)
T ss_pred ---CCceeEE--ecCCeEEEECCEEEEEEC-CCCceeeeeehhcccchhcccccccccCcccEEEecCC-----ccchhh
Confidence 0122111 245678999999999999 579999999988888865 11456666322 556677
Q ss_pred eeEeCCCCCccCC-CCCceEEE-EeCCceEEEEEEE----cCeEEEEEEEEcCC-----CceEEEEEECcccccCCCCcE
Q 001813 651 YIFRPNGTYPIEP-EGQLSFTI-LRGPLLDEVHQRI----NPWIYQVTRVYKGK-----DHAEIEFTVGPIPIDDGIGKE 719 (1010)
Q Consensus 651 Y~F~P~~~~~~~~-~~~~~i~v-~~Gpl~~~v~~~~----~~~i~~~irLy~~~-----~~ie~e~~v~~i~~~~~~~~e 719 (1010)
|+-.--.-..+++ .....+.| .+|++...+.+.+ ++.+.++|.|..+. +.|+|.++|+ |. +.+|-
T Consensus 773 WDte~ysle~y~vl~k~k~v~v~~~g~lr~sv~v~~qISe~s~~k~~isL~~~~~~ak~~~V~f~teV~---Wh-e~~KF 848 (1078)
T KOG4342|consen 773 WDTEDYSLERYPVLGKAKTVAVGTEGGLRGSVWVLLQISENSRLKQEISLDVGCTDAKLPYVRFHTEVH---WH-EAHKF 848 (1078)
T ss_pred hhhhhhceecceecCCCceEEeecCCCcceEEEEEEEcCcccccceEEEEecccccccCCceeeEEEEe---eh-hcCce
Confidence 7522111112333 23345666 8999988776554 57899999997765 7899999986 54 67899
Q ss_pred EEEEEEeeccCCcEEEEcCCcccceecccccccCcccccccccccceEeccceeeEEecCcceEEEeeccccccccCCCe
Q 001813 720 VVTQITSNMISNKTFYTDSSGRDFIERIRDYRKDWNLEVNQPIAGNYYPVNLGIYMKDNSSELSILVDRSVGGSSIADGQ 799 (1010)
Q Consensus 720 v~~~f~t~i~s~~~fyTDsnG~~~i~R~~~~r~~w~~~~~~pv~~NyYP~~s~i~i~D~~~~ltvl~dr~~G~ssl~~G~ 799 (1010)
+.+.|+.+|.|..+-| ..+|++.||+++|+.+|+-...+.+.. .+++..+-..|++|||||++|. |....-
T Consensus 849 LKVEFPv~irs~fAsY--EtQFGitkRPTHYNTSWDvAkFEVchh------kfaDySe~~~Gvs~LNDCKYGf-SthGnl 919 (1078)
T KOG4342|consen 849 LKVEFPVRIRSSFASY--ETQFGITKRPTHYNTSWDVAKFEVCHH------KFADYSEHGFGVSLLNDCKYGF-STHGNL 919 (1078)
T ss_pred EEeeccccccccchhh--hhhcccccCCccccccchhhHhHHHHh------hhhhhhhcccceeeeccccccc-ccccce
Confidence 9999999999876666 899999999999999999776666543 6799999999999999999999 588889
Q ss_pred EEEEEEeeecccCccCccccccccccccccccCeEEeeEEEEEecCccchh-hhcccchhhhccCceeeecccCCCcccc
Q 001813 800 LELMLHRRLVADDNRGVSEALNETVCVFDKCEGLTIIGKYYLRIDPVGEAA-KWRRSFGQEIYSPFLLAFTEQDGDHWAN 878 (1010)
Q Consensus 800 iElml~Rr~~~DD~rGvge~l~e~~~~~~~~~gl~~~~~~~l~l~~~~~~~-~~~r~~~~~~~~p~~~~~~~~~~~~~~~ 878 (1010)
|.|.|+|++-.+|.-. |.+ ++.++..+-+.+.+- +-.-+.+.++++|.-+.....+.
T Consensus 920 mrLSLLRsPKaPDAhA------DmG-----------~Hei~YA~yPH~g~lds~tv~aAh~fN~~fkl~lpa~~~----- 977 (1078)
T KOG4342|consen 920 MRLSLLRSPKAPDAHA------DMG-----------RHEITYALYPHKGSLDSGTVQAAHSFNFPFKLALPAPSP----- 977 (1078)
T ss_pred eeehhhcCCCCCCccc------ccC-----------cceEEEEeccCCCCCchhHHHHHHhcCCceeeccCCCCC-----
Confidence 9999999999999754 432 133445555544321 11124677888887443332221
Q ss_pred ccccccccCccccCCCCcceEEEeeecCC----CcEEEEEeccccc-cccCCCcceeeeeccccCCcCccceEEeccccc
Q 001813 879 SHLATYSAMDTTYVLPDNVALITLQELDS----GKILLRLAHLYEI-EEDTDLSVMSSVELKKVFPKKKISKVTEMNLSA 953 (1010)
Q Consensus 879 ~~~~~~~~l~~~~~lp~~vhlltl~~~~~----~~illRl~~l~~~-~~~~~~s~~~~v~l~~lf~~~~~~~i~etsLt~ 953 (1010)
-...+|..+.. +=.+||.|-+++..++ ..|++| +|+. |... .+.+.+ .+.+.++..+.+..
T Consensus 978 an~d~~dafsv--sgdpnViLs~iK~aE~~~~~~SivlR---vYEslGg~s----~a~L~~-----sL~v~~~~kcd~LE 1043 (1078)
T KOG4342|consen 978 ANADSWDAFSV--SGDPNVILSTIKQAESSPQRRSIVLR---VYESLGGHS----DAWLHL-----SLPVQEAIKCDLLE 1043 (1078)
T ss_pred CCCccccceee--cCCchHHHHHhhhhccCcccceEEEE---ehhhcCCcc----eEEEEE-----eeehhHhhhccchh
Confidence 11223433321 3456888888887754 369999 6765 2221 233333 34555666665554
Q ss_pred cchhhHhhhcceeeeecCCCCCCCcccCCCCCCCCCceEEecCcceEEEEEEE
Q 001813 954 NQERAVMEKKRLVWRVEGSSKEQPTAVRGSPVDPAKLVVELAPMEIRTFVIEF 1006 (1010)
Q Consensus 954 ~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~v~l~PmeIrTf~i~~ 1006 (1010)
......... + ..+.--..+-|+|.|.||.||.+++
T Consensus 1044 ~d~~~~lT~--------~----------~~~~a~~~~pi~lrpfeiAsf~~~l 1078 (1078)
T KOG4342|consen 1044 RDPAGHLTS--------G----------QPPEAHLFSPISLRPFEIASFSATL 1078 (1078)
T ss_pred cChHhhCcC--------C----------CCchhhhcCCcccceeeeeeeeecC
Confidence 321111100 0 0000001234789999999999864
No 6
>PF01074 Glyco_hydro_38: Glycosyl hydrolases family 38 N-terminal domain; InterPro: IPR000602 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 38 GH38 from CAZY comprises enzymes with only one known activity; alpha-mannosidase (3.2.1.24 from EC) (3.2.1.114 from EC). Lysosomal alpha-mannosidase is necessary for the catabolism of N-linked carbohydrates released during glycoprotein turnover. The enzyme catalyses the hydrolysis of terminal, non-reducing alpha-D-mannose residues in alpha-D-mannosides, and can cleave all known types of alpha-mannosidic linkages. Defects in the gene cause lysosomal alpha-mannosidosis (AM), a lysosomal storage disease characterised by the accumulation of unbranched oligo-saccharide chains.; GO: 0004559 alpha-mannosidase activity, 0005975 carbohydrate metabolic process; PDB: 2WYI_A 2WYH_A 1O7D_A 3CZN_A 2FYV_A 3D50_A 3EJU_A 3EJS_A 3DX3_A 3BVX_A ....
Probab=100.00 E-value=2.9e-59 Score=514.22 Aligned_cols=270 Identities=30% Similarity=0.524 Sum_probs=216.3
Q ss_pred EEEEEecccCCCccccchheeeeccCccchhhhHHHHHHHHHHHHHhCCCCeEEEechhHHHHHHhcCCHHHHHHHHHHH
Q 001813 37 NVHLVPHSHDDVGWLKTVDQYYVGSNNSIQVACVQNVLDSLIPALVADKNRKFIYVEQAFFQRWWRDQSEEVQNVVKQLV 116 (1010)
Q Consensus 37 ~V~lvpHSH~D~gWl~t~~ey~~~~~~~i~~~~v~~il~~vl~~L~~~p~~kF~~~e~~~~~~w~~~~~p~~~~~vk~lV 116 (1010)
+||+|||||+|+||++|+++|. ..+.++|+++++.|+++|++||+++|+.++ +||.+..|+.++++|+||
T Consensus 1 ~v~~i~HsH~D~~W~~t~~~~~---------~~~~~~~~~~l~~l~~~~~~~f~~~~~~~~-~~~~~~~p~~~~~~~~lv 70 (275)
T PF01074_consen 1 TVHVIPHSHWDRGWLWTFEEYR---------RYLVNILDSVLDLLEEDPDFRFIDGQTAYL-EDYLEDAPEEFKRIKKLV 70 (275)
T ss_dssp EEEEEEEEB--SSSSS-HHHHH---------HHHHHHHHHHHHHHHH-TT--EECTBCHHH-HHHHHCSGHHHHHHHHHH
T ss_pred CEEEccccccchhhcccHHHHH---------HHHHHHHHHHHHHHHhCCcceEeechhHHH-HHHHHhCCHHHHHHHHHH
Confidence 6999999999999999999994 799999999999999999999999888887 555556999999999999
Q ss_pred HCCCEEEEcceeeeeccCCCChHHHHHHHHHHHHHHHHHcCCCCceeeecCCCCCchhhHHHHHhhcCCcEEEEeecCHH
Q 001813 117 NSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFARIDYQ 196 (1010)
Q Consensus 117 ~~GrlE~vgGgwv~~Dea~~~~es~Irql~~G~~~l~~~fG~~p~v~w~~D~FGhs~~~p~ll~~~~G~~~~~~~R~~~~ 196 (1010)
++||||+|||||||+||+++++|++||||++|++|++++||+.|++||+||+||||+++|||| +++||++++++|++++
T Consensus 71 ~~Gri~~vgg~~~~~D~~l~~~Eslirql~~G~~~~~~~fg~~~~~~~~~D~FG~~~~lP~il-~~~Gi~~~v~~r~~~~ 149 (275)
T PF01074_consen 71 KEGRIEIVGGWYVQPDENLPSGESLIRQLLYGHKYLRKEFGVRPKVAWQPDSFGHSAQLPQIL-KQFGIKYFVIWRISWN 149 (275)
T ss_dssp HTTSEEESSSBSS-B-SSSS-HHHHHHHHHHHHHHHHHHHTG--SEEEESSSSSB-TCHHHHH-HTTT-SEEEESSS-HH
T ss_pred HhceeEEeCceeeeccccCCCHHHHHHHHhhhHHHHHHhcCCCCCeEEeCCCCCCchhhHHHH-hccCcceEEEeccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999 8999999999999999
Q ss_pred hHHHhhccCceeEEEeeCCCCCCCCceeEeeCCCCCCCCCCCCccccCCCCCCccCCccccCCChHHHHHHHHHHHHHHh
Q 001813 197 DRAKRINEKTLEVVWRASKSLGSSAQIMTGISPKNYEPPSDNFYFEVGDTSPIVQDDMNLFDYNVPERVNDFVSAAIAQA 276 (1010)
Q Consensus 197 ~~~~~~~~~~~eF~W~~~d~~~~gs~i~th~~~~~Y~~p~~~f~f~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~~~ 276 (1010)
.++.++..+.++|+|+|+| |++||||+++.+|..| . .+ .+. ++++.+++++++.+
T Consensus 150 ~~~~~~~~~~~~F~W~g~d----Gs~ilt~~~~~~y~~~-~-~~------------------~~~-~~~~~~~~~~~~~~ 204 (275)
T PF01074_consen 150 DKNPFKANPQSEFYWQGPD----GSEILTHVLPNYYYGP-W-YG------------------SEF-EDADELLEQLRKLA 204 (275)
T ss_dssp HHHHHHHTTSSEEEEE-TT----STEEEEEE-TST-TSH-H-TT------------------CCH-HHHHHHHHHHHHHH
T ss_pred cccccccCCCceEEEecCC----CcceeEEecccCCCCC-C-CC------------------ccc-ccHHHHHHHHHHHH
Confidence 9998888888999999999 9999999999877653 0 10 011 35788999999999
Q ss_pred hhcCCCeEEEeecCCCCCcchHHHHHHHHHHHHHHh---c-CCCeeEEEcChhhhHHHHHhcCCCCCCc-cCCCcccc
Q 001813 277 NITRTNHIMWTMGTDFKYQYAHTWFRQMDKFIHYVN---Q-DGRVNALYSTPSMYIDAKYAANESWPLK-TDDFFPYA 349 (1010)
Q Consensus 277 ~~~~t~~il~~~G~Df~y~~a~~~f~~~~~li~~~N---~-~~~~~i~~sT~~~Yf~al~~~~~~~p~~-~gDf~py~ 349 (1010)
+.+.++++|+|+|+| ...+..++++++++| + ...+++++||+++||++++++ .++|++ +|||+||+
T Consensus 205 ~~~~~~~~l~~~G~d------~~~~~~~~~~~~~i~~~~~~~~~~~i~~sT~~~yf~~l~~~-~~~p~~~~~df~~Y~ 275 (275)
T PF01074_consen 205 KKYYTNNILIPYGDD------DDGGPPDEELIEYINEWNEEYPGPKIKYSTLSEYFEALEKE-SELPVHYHGDFPPYA 275 (275)
T ss_dssp CCSSSSEEEEEEEEE------HHHHHHHHHHHHHHHHHHHHGCTEEEEE--HHHHHHHHHHC---B-EE-ES-B-S-E
T ss_pred HhcCCCceEEEeecC------CCCCCcHHHHHHHHHHhcccCCCeEEEECCHHHHHHHHHhc-cCCCcccCCCCCCCC
Confidence 999999999999988 222344445555554 4 458999999999999999998 999999 99999996
No 7
>COG0383 AMS1 Alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.6e-52 Score=509.99 Aligned_cols=715 Identities=19% Similarity=0.192 Sum_probs=502.1
Q ss_pred eEEEEEecccCCCccccchheeeeccCccchhhhHHHHHHHHHHHHHhCCCCeEEEechhHHHHHHhcCCHHHHHHHHHH
Q 001813 36 INVHLVPHSHDDVGWLKTVDQYYVGSNNSIQVACVQNVLDSLIPALVADKNRKFIYVEQAFFQRWWRDQSEEVQNVVKQL 115 (1010)
Q Consensus 36 ~~V~lvpHSH~D~gWl~t~~ey~~~~~~~i~~~~v~~il~~vl~~L~~~p~~kF~~~e~~~~~~w~~~~~p~~~~~vk~l 115 (1010)
..|+.+.|+|.|..|+|+++|.. +.....+.+++..|...|.++|+.+ +..++.|..+..|+..++ ++
T Consensus 198 ~~I~~~ghahid~aWlw~l~et~---------r~a~ts~~~~~~l~D~~p~~~~~~s-~~~~y~~l~~d~p~l~~~--~~ 265 (943)
T COG0383 198 NEIPAVGHAHIDTAWLWPLDETE---------RKASTSFSLVMNLMDHYPVQKFVQS-AAALYNWLKPDVPFLFSR--PA 265 (943)
T ss_pred ccccccchhhHHHHHhccHHHHH---------HHHhhhhhheecccccChhhhhhhh-HHHHHHHhcCccHHHhhc--cc
Confidence 44999999999999999999997 6788899999999999999999975 555569999999999999 99
Q ss_pred HHCCCEEEEcceeeeeccCCCChHHHHHHHHHHHHHHHHHcCCCCceeeecCCCCCchhhHHHHHhhcCCcEEEEeecCH
Q 001813 116 VNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFARIDY 195 (1010)
Q Consensus 116 V~~GrlE~vgGgwv~~Dea~~~~es~Irql~~G~~~l~~~fG~~p~v~w~~D~FGhs~~~p~ll~~~~G~~~~~~~R~~~ 195 (1010)
|+.|+|+++||+||.+|.++++||+++||+.+|++|+.++||...|+.|.||+||.|+++|||+ ..+|+++|+++++.|
T Consensus 266 v~~~~~~~~~g~~ve~d~n~~sGEslsrq~~~gq~~~~~~f~~ssri~w~pd~fg~s~~Lpqil-~p~gi~~f~t~klaw 344 (943)
T COG0383 266 VEFEQWEIVGGMWVEEDLNTPSGESLSRQFLYGQRFFTEKFGASSRIYWKPDSFGFSGQLPQIL-EPLGIDVFVTTKLAW 344 (943)
T ss_pred ccccceEEeecccccccCCccccchhhhhhhccceeeecccCccceeEeehhccccchhHHHHH-Hhhcchhhhccccch
Confidence 9999999999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred HhHHHhhccCceeEEEeeCCCCCCCCceeEeeCCCCCCCCCCCCccccCCCCCCccCCccccCCChHHHHHHHHHHHHHH
Q 001813 196 QDRAKRINEKTLEVVWRASKSLGSSAQIMTGISPKNYEPPSDNFYFEVGDTSPIVQDDMNLFDYNVPERVNDFVSAAIAQ 275 (1010)
Q Consensus 196 ~~~~~~~~~~~~eF~W~~~d~~~~gs~i~th~~~~~Y~~p~~~f~f~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~~ 275 (1010)
++.+.++++. |.|++.+ |+++++|..+.+++.. . +.. ..+++..
T Consensus 345 n~tn~~Ph~~---~~w~~~d----g~e~~~hds~~~~~~d-------~---------------------v~~-~~~~r~~ 388 (943)
T COG0383 345 NDTNRFPHDL---LRWRWKD----GTENLAHDSICGCSSD-------P---------------------VHR-EMEYRFE 388 (943)
T ss_pred hhccCCChhH---heeeccc----ccccceeecCCCCccc-------H---------------------HHH-HHHhhhh
Confidence 9999999965 9999999 9999999766433211 0 000 1111111
Q ss_pred hhhcCCCeEEEeecC-CCCCcchHHHHHHHHHHHHHHhcCCCeeEEEcChhhhHHHH----HhcCCCCCCccCCC-cccc
Q 001813 276 ANITRTNHIMWTMGT-DFKYQYAHTWFRQMDKFIHYVNQDGRVNALYSTPSMYIDAK----YAANESWPLKTDDF-FPYA 349 (1010)
Q Consensus 276 ~~~~~t~~il~~~G~-Df~y~~a~~~f~~~~~li~~~N~~~~~~i~~sT~~~Yf~al----~~~~~~~p~~~gDf-~py~ 349 (1010)
. .....|+.+|. |+..+...++-++.. ...+..+|... .......|++.|++ +.+|
T Consensus 389 ~---~~~~~~~~~g~gd~ggg~~~dm~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ely~E~h 450 (943)
T COG0383 389 K---INQVGLYLYGYGDGGGGPSIDMLENPE---------------LPIAEGVFNTGVEKKTSTLELVPTWDGELYLELH 450 (943)
T ss_pred h---hccceeEEeeccCCCCCCCHHHHhccc---------------cccccceeeecceeeeeecccccccchhhhhhcc
Confidence 1 33455666664 444444332211111 12223333222 22245689999985 4888
Q ss_pred ccCCCceeeeecccchhhHHHHHhhHHHHHHHHhhhhcc------cccCCCchHHHHHHHHhhhccccccCccchhhHH-
Q 001813 350 DRENAYWTGYFTSRPALKGYVRTMSAYYLAARQLEFFKG------RNEVGLSTDSLADALALVQHHDAVSGTEKQHVAD- 422 (1010)
Q Consensus 350 ~~~~~yWtG~yTSr~~~K~~~R~~e~~L~~ae~l~~l~~------~~~~~~~~~~~w~~l~~~QhHDaItGTs~~~V~~- 422 (1010)
+ |+|||....|+++|..|..|+.+|.+.+++. ..++...++++|+.++++|+||.++|++...|+.
T Consensus 451 r-------g~~t~~~~~k~~~r~~e~~l~d~e~~~~~~~~~~~~~~~~~~~~~~~~w~~~l~~qfhdvlpgs~i~~vy~~ 523 (943)
T COG0383 451 R-------GTYTTQAKTKKLNRESEFLLEDAEGISVEAAIIEGDRVTYPYELLNELWKGLLLAQFHDVLPGSSIKEVYSY 523 (943)
T ss_pred C-------ceeehhhhhhhhccccccceecccccchhhhhhccccccCchhhHHHHHHHhhhhhceeeccccceeeechh
Confidence 6 9999999999999999999999999888742 3466778999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCcCcccccccccccCCCCccccCCCCceEEEEEcCCCceEeEEEE
Q 001813 423 DYAKRLSIGYTEAEKVVAASLACLTEFSKNGCVNPITNFQQCPLLNISYCPPSEVDLSSGKSLVVVVYNPLGWKREDIIR 502 (1010)
Q Consensus 423 dy~~rl~~a~~~~~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~ln~s~~~~~~~~l~~~~~~~v~vfNpl~~~r~~~V~ 502 (1010)
+....+......+..++..+++.|.+. ......++|++.|.+.
T Consensus 524 ~a~~~~~~~~~~~~~i~~~~~~~l~~~---------------------------------~~e~~~~~~~~~~~~~---- 566 (943)
T COG0383 524 DALPLLEVVQKGASKIAELALKVLSSQ---------------------------------CLENLFVKNTLSWNGI---- 566 (943)
T ss_pred hHHHHHHhhhccchhhhhhhhhhhhhc---------------------------------cccceEEEeeccCCcc----
Confidence 888888888888888888888877432 1235789999999981
Q ss_pred EEEeCCeEEEEcCCCCEEEEEEeecccccccccccccccccCCCCCCCCcEEEEEEEecCCCceEEEEEEeCCcccCccc
Q 001813 503 IPVINENVTVKDSKGKVIESQLLPLLKDSMSLRNSYSTAYLGKSTNVTPSYWLAFSASVPPLGFNTYIISSAKQAASHSG 582 (1010)
Q Consensus 503 i~v~~~~~~v~d~~g~~v~~Qi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~f~~~vPplG~~~~~v~~~~~~~~~~~ 582 (1010)
.+.|.|..+..++.+.+. ...++|++|...+++++....
T Consensus 567 ------~~~v~d~~~~~~~~~~~~------------------------------~~ed~~~~g~~~i~~~~~~~~----- 605 (943)
T COG0383 567 ------SLQVLDKTSGGIYTSQLT------------------------------ALEDVGDIGNEYIYSQPTKTE----- 605 (943)
T ss_pred ------eEEEEEcCCCceehhhhh------------------------------hhhhcCCcccceeEecccccc-----
Confidence 455666555444433221 013688889888877332211
Q ss_pred cceeeeccccCCCceEEcCCeEEEEEeCCCC-eEEEEEecCCCcEEEEEEEEEEeecCCCCCCCCCCcceeEeCCCCC-c
Q 001813 583 MRTVYKSQIRQNDTIEVGPGNLKLLYSGKRA-KLMRYINSKTSVNKLLEQSYIYYRGDDGSKDLQPSGAYIFRPNGTY-P 660 (1010)
Q Consensus 583 ~s~~~~~~~~~~~~~~ieN~~~~v~~~~~~G-~l~sl~dk~~g~~~~~~~~~~~Y~~~~g~~~~~~sGAY~F~P~~~~-~ 660 (1010)
...+..+++..+..++ ++| .+..+.++ +..+.||.-.+.... .
T Consensus 606 -----------~~~~~~~~~~~~~~~~-~~gn~~~~~~~~-----------------------~~~~~~w~i~~~~~~~~ 650 (943)
T COG0383 606 -----------PETVIEEKEWKRLIIN-DTGNQLALIEDE-----------------------PAYWDAWNIDKFLEEEL 650 (943)
T ss_pred -----------ccccccccchheeecc-CCCcceeeeecc-----------------------cceechhcchhhhhhhh
Confidence 0122334454555555 566 33211111 223455555544322 1
Q ss_pred cCCCCCceEEEEeCCceEEEEEEE---cCeEEEEEEEEcCCCceEEEEEECcccccCCCCcEEEEEEEeeccCCcEEEEc
Q 001813 661 IEPEGQLSFTILRGPLLDEVHQRI---NPWIYQVTRVYKGKDHAEIEFTVGPIPIDDGIGKEVVTQITSNMISNKTFYTD 737 (1010)
Q Consensus 661 ~~~~~~~~i~v~~Gpl~~~v~~~~---~~~i~~~irLy~~~~~ie~e~~v~~i~~~~~~~~ev~~~f~t~i~s~~~fyTD 737 (1010)
..+.....-.+++||+..++++.. .+.+++.|++|+++++|+|++.|++. ..+|.+++.|++++.++.. +.
T Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~l~~~s~~l~~~t~vd~q----~~~~~lrv~fp~~~~s~~a--~~ 724 (943)
T COG0383 651 LALTALPEEAIENGPLVRTVRVSKELTESTITQKVTLYKGSPRLDFKTEVDNQ----VRDHRLRVLFPTDIASDFA--TA 724 (943)
T ss_pred hhhhccccchhccccceeeeeeeeeccceEEEEEEEEecCCceeEEEEEEEcc----ccceEEEEEecccccccce--ec
Confidence 222222222358999999988764 46789999999999999999999855 5799999999999998643 33
Q ss_pred CCcccceecccccccCcccccccccccceEeccceeeEEecCcc--eEEEeeccccccccCCCeEEEEEEeee-------
Q 001813 738 SSGRDFIERIRDYRKDWNLEVNQPIAGNYYPVNLGIYMKDNSSE--LSILVDRSVGGSSIADGQLELMLHRRL------- 808 (1010)
Q Consensus 738 snG~~~i~R~~~~r~~w~~~~~~pv~~NyYP~~s~i~i~D~~~~--ltvl~dr~~G~ssl~~G~iElml~Rr~------- 808 (1010)
+..|+.++|+++..+.|+.. .+--|+..++.+.|...| +++++|+++|++ .+++.|.|+|.|..
T Consensus 725 d~~fg~v~Rp~~~~~~W~~a------~~e~p~~~~vdls~~~~g~~vs~ln~~kYg~~-~~~~~l~lTLLrs~~~~gd~~ 797 (943)
T COG0383 725 DIPFGVVERPTHPNTSWENA------RFEVPLQKFVDLSDGEYGVTVSLLGDCKYGIS-THGNLLALTLLRSVGELGDWG 797 (943)
T ss_pred cccceeeccCCCCchhhhcc------cCcchhhccccccCCccceeEeccCCcceeEe-ccCCEEEEEeccccccccccc
Confidence 69999999999988889754 333467899999999999 888999999996 59999999999998
Q ss_pred cccCccCccccccccccccccccCeEEeeEEEEEecCccchhhhcccchhhhccCceeeecccCC-CccccccccccccC
Q 001813 809 VADDNRGVSEALNETVCVFDKCEGLTIIGKYYLRIDPVGEAAKWRRSFGQEIYSPFLLAFTEQDG-DHWANSHLATYSAM 887 (1010)
Q Consensus 809 ~~DD~rGvge~l~e~~~~~~~~~gl~~~~~~~l~l~~~~~~~~~~r~~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~l 887 (1010)
.++|. +-+ |.|. ...+|.+.+-............++.++.|........+. ............++
T Consensus 798 ~~P~p--------~Ad-----~~g~-h~~~y~ly~h~~~~~~~~~~~~a~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 863 (943)
T COG0383 798 YRPDP--------EAD-----CLGE-HEFTYALYPHQGSFLSAPTAVRAYELNVPVRTVQVEEDGVEGTLEATLDLLEPL 863 (943)
T ss_pred ccCCc--------hhh-----hccc-eeEEEEEEEccccccccchhhhhhhccCceEEeecccccccccchhcccccccc
Confidence 55554 222 2232 233444433321111111112334455665554432211 00000011111111
Q ss_pred ccccCCCCcceEEEeeecCCC-cEEEEEeccccccccCCCcceeeeeccccCCcCccce-EEeccccccchhhHhhhcce
Q 001813 888 DTTYVLPDNVALITLQELDSG-KILLRLAHLYEIEEDTDLSVMSSVELKKVFPKKKISK-VTEMNLSANQERAVMEKKRL 965 (1010)
Q Consensus 888 ~~~~~lp~~vhlltl~~~~~~-~illRl~~l~~~~~~~~~s~~~~v~l~~lf~~~~~~~-i~etsLt~~~~~~~~~~~~~ 965 (1010)
. ..-|+++.|-.+|+..++ .++||+.+...... . .-..+ .+.+.. ++||.|-.+ +.
T Consensus 864 ~--~~~~~~~~lsA~K~aed~~~~IlR~yn~~~~~~-~---~~~~~-------~l~~~~~~~~~~llE~----~~----- 921 (943)
T COG0383 864 L--LVGPDNLILSALKRAEDGDGLILRLYNPSGTKT-L---ALIEL-------SLPVVNAIRETNLLEN----EN----- 921 (943)
T ss_pred c--cCCCcceEEEeeeecccCCceEEEEeccCCCCc-c---eeeec-------cchhhhhhhhhhhhcc----cc-----
Confidence 1 145889999999999876 69999776443222 1 01111 234444 777777765 00
Q ss_pred eeeecCCCCCCCcccCCCCCCCCCceEEecCcceEEEEEE
Q 001813 966 VWRVEGSSKEQPTAVRGSPVDPAKLVVELAPMEIRTFVIE 1005 (1010)
Q Consensus 966 ~w~~~~~~~~~~~~~~~~~~~~~~~~v~l~PmeIrTf~i~ 1005 (1010)
++..+ ..|+.+|.||.||++.
T Consensus 922 ------------------~~~~~-~~i~~~~~ei~t~k~~ 942 (943)
T COG0383 922 ------------------ELETN-SPITPKPVEIVTLKLE 942 (943)
T ss_pred ------------------ccccC-CcccccceEEEEEEee
Confidence 00000 1577889999999986
No 8
>PF07748 Glyco_hydro_38C: Glycosyl hydrolases family 38 C-terminal domain; InterPro: IPR011682 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 38 GH38 from CAZY comprises enzymes with only one known activity; alpha-mannosidase (3.2.1.24 from EC) (3.2.1.114 from EC). This domain is found at the C terminus of glycosyl hydrolases from family 38.; GO: 0015923 mannosidase activity, 0006013 mannose metabolic process; PDB: 2WYI_A 2WYH_A 3LVT_A 3CZN_A 2FYV_A 3D50_A 3EJU_A 3EJS_A 3DX3_A 3BVX_A ....
Probab=100.00 E-value=4.1e-44 Score=424.28 Aligned_cols=429 Identities=29% Similarity=0.426 Sum_probs=286.0
Q ss_pred eEEEEEcCCCceEeEEEEEEEeCCeEEEEcCCCCEEEEEEeecccccccccccccccccCCCCCCCCcEEEEEEEecCCC
Q 001813 485 LVVVVYNPLGWKREDIIRIPVINENVTVKDSKGKVIESQLLPLLKDSMSLRNSYSTAYLGKSTNVTPSYWLAFSASVPPL 564 (1010)
Q Consensus 485 ~~v~vfNpl~~~r~~~V~i~v~~~~~~v~d~~g~~v~~Qi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~f~~~vPpl 564 (1010)
+.|+|||||+|+|+++|+|+++.+.+.+.|..|++|++|+++... ....++|.|.++||||
T Consensus 1 ~~vvvfN~l~~~r~~vv~i~v~~~~~~~~~~~g~~v~~qi~~~~~-------------------~~~~~~l~f~~~vPal 61 (457)
T PF07748_consen 1 FPVVVFNPLPWPRSEVVEIPVNTPNVSVYDADGKPVPSQIIPEPY-------------------STGRYELLFVVDVPAL 61 (457)
T ss_dssp EEEEEEE-SSS-EEEEEEEEEEECEEEEECSTSHEEHCEEEEEEE-------------------EEEEEEEEEEEEE-TT
T ss_pred CEEEEEECCCCcEEEEEEEEeccCceEEEecCCcEeeEEEEeccC-------------------CCCceEEEEEeccCCc
Confidence 479999999999999999999999999999999999999998211 1245789998999999
Q ss_pred ceEEEEEEeCCcccCccccceeeeccccCCCceEEcCCeEEEEEeCCCCeEEEEEecCCCcEEE--EEEEEEEeecCCCC
Q 001813 565 GFNTYIISSAKQAASHSGMRTVYKSQIRQNDTIEVGPGNLKLLYSGKRAKLMRYINSKTSVNKL--LEQSYIYYRGDDGS 642 (1010)
Q Consensus 565 G~~~~~v~~~~~~~~~~~~s~~~~~~~~~~~~~~ieN~~~~v~~~~~~G~l~sl~dk~~g~~~~--~~~~~~~Y~~~~g~ 642 (1010)
||++|.|............ .. ....+...|||++|+|+||+.+|.|.+++||++|+++. ..+++..|.+..++
T Consensus 62 Gy~~~~i~~~~~~~~~~~~-~~----~~~~~~~~leN~~~~v~~~~~tG~i~sl~dk~~g~~~~~~~~~~~~~y~~~~~~ 136 (457)
T PF07748_consen 62 GYKTYRIVEGESSEPSNEA-SI----AKDSGDNVLENEFYKVTFDPNTGGIKSLYDKKTGREYVDQDGNDFYIYEDIDGD 136 (457)
T ss_dssp EEEEEEEEECSS--TTC---CE----EETT-TTEEETSSEEEEE-TTTSSEEEEEETTTS-EEEEEECEEEEEEEBTTSC
T ss_pred eeEEEEeeccccccccccc-ee----ecceeeEEEEccEEEEEEeCCCCeEEEEEEccCCeEEEeecCCceeEecccccc
Confidence 9999999987654322100 00 01113579999999999996669999999999999999 88899999765443
Q ss_pred C-----CCCCCcceeEeCCCCCccCCCCCceEEEEeCC--ceEEEEEEEcCeEEEEEEEEcCCCceEEEEEECcccccCC
Q 001813 643 K-----DLQPSGAYIFRPNGTYPIEPEGQLSFTILRGP--LLDEVHQRINPWIYQVTRVYKGKDHAEIEFTVGPIPIDDG 715 (1010)
Q Consensus 643 ~-----~~~~sGAY~F~P~~~~~~~~~~~~~i~v~~Gp--l~~~v~~~~~~~i~~~irLy~~~~~ie~e~~v~~i~~~~~ 715 (1010)
. ....+|+|.|.|+++....+.-...+. ..+. ++.++.....+.++++++||+++++|||++.|+|.+.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~~-~p~~~~~~~~~~~~~~~~i~~~i~L~~~~~~ie~~~~vdn~~~--- 212 (457)
T PF07748_consen 137 YDISPLELQRSGAYLFVEDGPLRSSIRVEYKFE-LPKNLSLVKRSEQTGSSRITQTIRLYKGSPRIEFETEVDNWAE--- 212 (457)
T ss_dssp TTE-SCCCGSEECCEEEEESSSEEEEEEEEEEE-EESCBECEEEESCEEEEEEEEEEEEETTESSEEEEEEEEE-TT---
T ss_pred ccccccccccCceEEEEecCCceEEEEEEEEEe-ccCCcEEEEEEEeccceEEEEEEEEecCceEEEEEEEeccccc---
Confidence 0 123578888887665310000000000 1111 2222222345689999999999999999999986532
Q ss_pred CCc-EEEEEEEeeccCCcEEEEcCCcccceecccccccCcccccccccccceEeccceeeEEecCcceEEEeeccccccc
Q 001813 716 IGK-EVVTQITSNMISNKTFYTDSSGRDFIERIRDYRKDWNLEVNQPIAGNYYPVNLGIYMKDNSSELSILVDRSVGGSS 794 (1010)
Q Consensus 716 ~~~-ev~~~f~t~i~s~~~fyTDsnG~~~i~R~~~~r~~w~~~~~~pv~~NyYP~~s~i~i~D~~~~ltvl~dr~~G~ss 794 (1010)
.++ +++++|+|+|.++..||+|.+|+.+.+|++. .+.|+++|||||.+.++|.|.+.+|+|+||+++|+++
T Consensus 213 ~~~~~l~~~f~t~i~~~~~~~~~~fG~~~r~~~~~--------~~~~~~~~~~p~~~~~~v~~~~~~l~i~~d~~~g~~~ 284 (457)
T PF07748_consen 213 DHRKELRVRFPTNIDSDEAFYDDQFGFIERKRPTH--------PNTPWEANYYPVPSHAFVDDSDSRLAILNDGKYGYES 284 (457)
T ss_dssp SCEEEEEEEEEES-S-TCEEEEESTTEEEEECESS--------TTTTCGGG-EEECSCCEEEECSECEEEEESS-EEEEE
T ss_pred CCceeEEEEeecCCCCCCEEEECCCCeEEecCCcc--------ccCCcccccCCCcceEEEEcCCCCEEEEcCCCcceEe
Confidence 233 6999999999999999988777666554543 2367789999999999999999889999999999998
Q ss_pred cC-CCeEEEEEEeeecccCccCccccccccccccccccCeEEeeEEEEEecCccchhhhcccchhhhccCceeeecccCC
Q 001813 795 IA-DGQLELMLHRRLVADDNRGVSEALNETVCVFDKCEGLTIIGKYYLRIDPVGEAAKWRRSFGQEIYSPFLLAFTEQDG 873 (1010)
Q Consensus 795 l~-~G~iElml~Rr~~~DD~rGvge~l~e~~~~~~~~~gl~~~~~~~l~l~~~~~~~~~~r~~~~~~~~p~~~~~~~~~~ 873 (1010)
+. +|+|+||||||+.+||++|+++ |.|.+...........+.+..+++|++++.....
T Consensus 285 ~~~~g~l~ltL~R~~~~D~g~~~~~--------------------~~l~~~~~~~~~~~~~~~a~~l~~Pl~~~~~~~~- 343 (457)
T PF07748_consen 285 LDQDGELELTLLRRPSQDDGRGVFR--------------------YALYPHSGSWDEADVVQEAYELNQPLIVFNSSNI- 343 (457)
T ss_dssp CTTTTEEEEEEEEEBSCG-SSSEEC--------------------CEEEEEEEEEEEEECHHCHHHHTS-EEEESS--T-
T ss_pred ccCCCeEEEEEeecccccCCccEEE--------------------EEEEEeccccccccchhhhhhccCccEEeecccc-
Confidence 87 9999999999999999999762 3333322211110112355688899887622111
Q ss_pred CccccccccccccCcc-ccCCCCcceEEEe-----eecCCC-----cEEEEEeccccccccCC---Ccce---eeeeccc
Q 001813 874 DHWANSHLATYSAMDT-TYVLPDNVALITL-----QELDSG-----KILLRLAHLYEIEEDTD---LSVM---SSVELKK 936 (1010)
Q Consensus 874 ~~~~~~~~~~~~~l~~-~~~lp~~vhlltl-----~~~~~~-----~illRl~~l~~~~~~~~---~s~~---~~v~l~~ 936 (1010)
.......++++.. ...+|+++|+.+| |+..++ .++||+-+......... .+.+ +++.+.+
T Consensus 344 ---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~sa~K~aed~~~~~~~~ilR~~n~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (457)
T PF07748_consen 344 ---QARQLNSFSGLSLPPEESPLNIHLLNLVVSALKKAEDGSDWSDGLILRLYNPSGKETEASLDFLSKPLSGAEVNLVN 420 (457)
T ss_dssp ---TBEE--CE-TCS--SSEESTCECEEEEEEEEEEECTTTSEEETCEEEEEEESSSSTCCCTTCCTSCCTEEEEEEEES
T ss_pred ---ccccccCCCcccccccccccccCCCcccccccccccccccccCCEEEEEEecCCCccccccccCCccceeEEEEecc
Confidence 1111223343321 1247888887776 666555 68888765544432222 1334 7888889
Q ss_pred cCCcCccceEEeccccccchhhHhhhcceeeeecCCCCCCCcccCCCCCCCCCceEEecCcceEEEE
Q 001813 937 VFPKKKISKVTEMNLSANQERAVMEKKRLVWRVEGSSKEQPTAVRGSPVDPAKLVVELAPMEIRTFV 1003 (1010)
Q Consensus 937 lf~~~~~~~i~etsLt~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~v~l~PmeIrTf~ 1003 (1010)
+|....+..+.||++++... .+...|+|+|||||||+
T Consensus 421 lle~~~~~~i~e~s~~~~~~------------------------------~~~~~~~l~P~EIkT~r 457 (457)
T PF07748_consen 421 LLEEPDIEEIEETSLSDPSE------------------------------SNSVELTLKPFEIKTFR 457 (457)
T ss_dssp TTSSSCEEEEEEE-SEEEES------------------------------CGGTCSEE-TTEEEEEE
T ss_pred cccCCCccceEeeccCCCCC------------------------------CCEeEEEEeCcEEEEEC
Confidence 99988888999999553211 11246889999999996
No 9
>PF09261 Alpha-mann_mid: Alpha mannosidase, middle domain; InterPro: IPR015341 Members of this entry belong to the glycosyl hydrolase family 38, This domain, which is found in the central region adopts a structure consisting of three alpha helices, in an immunoglobulin/albumin-binding domain-like fold. The domain is predominantly found in the enzyme alpha-mannosidase []. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0008270 zinc ion binding; PDB: 1O7D_C 3LVT_A 3CZN_A 2FYV_A 3D50_A 3EJU_A 3EJS_A 3DX3_A 3BVX_A 3BUQ_A ....
Probab=99.83 E-value=1.1e-21 Score=172.08 Aligned_cols=75 Identities=39% Similarity=0.541 Sum_probs=65.4
Q ss_pred CceeeeecccchhhHHHHHhhHHHHHHHHhhhhcccc-----cCCCchHHHHHHHHhhhccccccCccchhhHHHHHHHH
Q 001813 354 AYWTGYFTSRPALKGYVRTMSAYYLAARQLEFFKGRN-----EVGLSTDSLADALALVQHHDAVSGTEKQHVADDYAKRL 428 (1010)
Q Consensus 354 ~yWtG~yTSr~~~K~~~R~~e~~L~~ae~l~~l~~~~-----~~~~~~~~~w~~l~~~QhHDaItGTs~~~V~~dy~~rl 428 (1010)
+||+|||||||.+|+++|.+|++|+.||+|++++... ++...++++|+.|+++||||+||||++++|++||.+||
T Consensus 1 e~~~G~~tSr~~~K~~~r~~e~~L~~~E~l~~~~~~~~~~~~~~~~~l~~~w~~l~~~q~HD~i~GT~~~~V~~d~~~rl 80 (80)
T PF09261_consen 1 EYWTGYYTSRPDIKQLNRRAENLLRAAEPLAALAALLGNGGDYPQEELEKAWKALLLNQFHDAITGTSIDSVYDDYLRRL 80 (80)
T ss_dssp EES-GGGCSTHHHHHHHHHHHHHHHCHHHHHHHCHHH--HSG-HHHHHHHHHHHHHCTTBTTTTTS-S-HHHHHHHHHHH
T ss_pred CCcceeeeCHHHHHHHHHHHHHHHHHHHHHHHHHhHhccCccccHHHHHHHHHHHHHhccCCCCCCcChHHHHHHHHHhC
Confidence 4899999999999999999999999999999986433 45567899999999999999999999999999999886
No 10
>smart00872 Alpha-mann_mid Alpha mannosidase, middle domain. Members of this entry belong to the glycosyl hydrolase family 38, This domain, which is found in the central region adopts a structure consisting of three alpha helices, in an immunoglobulin/albumin-binding domain-like fold. The domain is predominantly found in the enzyme alpha-mannosidase PUBMED:12634058.
Probab=99.80 E-value=3.7e-20 Score=162.09 Aligned_cols=74 Identities=38% Similarity=0.498 Sum_probs=68.1
Q ss_pred ceeeeecccchhhHHHHHhhHHHHHHHHhhhhcc-----cccCCCchHHHHHHHHhhhccccccCccchhhHHHHHHHH
Q 001813 355 YWTGYFTSRPALKGYVRTMSAYYLAARQLEFFKG-----RNEVGLSTDSLADALALVQHHDAVSGTEKQHVADDYAKRL 428 (1010)
Q Consensus 355 yWtG~yTSr~~~K~~~R~~e~~L~~ae~l~~l~~-----~~~~~~~~~~~w~~l~~~QhHDaItGTs~~~V~~dy~~rl 428 (1010)
||+|||||||.+|+++|++|++|+.+|.+.++++ ..++...++.+|+.|+++||||+||||++++|++||..|+
T Consensus 1 ~h~G~~Tsr~~~K~~~r~~E~~L~~~e~~~~~~~~~~~~~~~~~~~l~~~wk~ll~~q~HD~i~Gt~~~~V~~d~~~r~ 79 (79)
T smart00872 1 YHRGTYTSRPYLKRLNRRLESLLRAAEELAALAALLLLGYKYPSEQLEELWKALLLNQFHDAITGTSIDEVYDDYETRL 79 (79)
T ss_pred CCCceecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHhcCcccCCccCcHHHHHHHHHhC
Confidence 7999999999999999999999999999998853 3466678999999999999999999999999999998874
No 11
>COG0383 AMS1 Alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=99.77 E-value=3.6e-20 Score=229.38 Aligned_cols=358 Identities=15% Similarity=0.094 Sum_probs=260.9
Q ss_pred CceEEEEEecccCCCccccchheeeeccCccchhhhHHHHHHHHHHHHHhCCC-CeEEEechhHHHHHHhcCCHHHHHHH
Q 001813 34 GKINVHLVPHSHDDVGWLKTVDQYYVGSNNSIQVACVQNVLDSLIPALVADKN-RKFIYVEQAFFQRWWRDQSEEVQNVV 112 (1010)
Q Consensus 34 ~~~~V~lvpHSH~D~gWl~t~~ey~~~~~~~i~~~~v~~il~~vl~~L~~~p~-~kF~~~e~~~~~~w~~~~~p~~~~~v 112 (1010)
.+..+|++.|+|||++|+.+.+.... .+...++.+++.++++|. ..|..+++....+.+....|+.++++
T Consensus 2 ~~~~~~ii~~~~wdrew~~~~e~~~~---------~~~~~~~~i~~~~~~~~~~~~~~~d~qt~~l~d~l~v~~~~~~~~ 72 (943)
T COG0383 2 LKKKVHIISHSHWDREWYFTSESHRI---------LLDELFEEIIELLQKDPEFAGFHLDGQTIWLDDYLAVPPELKDRV 72 (943)
T ss_pred CccccccchhhhhhhhceeeccceEe---------echhhhhhhhhccccCcccceecCccceeeeeeeEEecccchhhH
Confidence 34567999999999999999998874 445559999999999994 45999999888888888999999999
Q ss_pred HHHHHCCCEEEEcceeeeeccCCCChHHHHHHHHHHHHHHHHHcCCCCceeeecCCCCCchhhHHHHHhhcCCcEEEEee
Q 001813 113 KQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFAR 192 (1010)
Q Consensus 113 k~lV~~GrlE~vgGgwv~~Dea~~~~es~Irql~~G~~~l~~~fG~~p~v~w~~D~FGhs~~~p~ll~~~~G~~~~~~~R 192 (1010)
+.+++.|++ .+|.++.+.|.+.+++|+.+|++++|..+ ...+|...+.||.+|.||+..++|+++ ..+|++.+.|+|
T Consensus 73 ~~~~~~~~l-~ig~~~~~~~~~~~~~e~~~rn~l~~~~~-~~~~~~~~~~g~~~d~~g~~~qa~~~~-~~~~i~~~~f~r 149 (943)
T COG0383 73 KLLIASGKL-GIGPWYTQTDTFILSGESNVRNLLIGEFD-AERFGKAMKLGYFPDTFGNLGQAPQLY-ENAGISAVAFGR 149 (943)
T ss_pred HHHHhhcCc-cccCCCCeeEEEEeccccceeeeecchHH-HHHhhhhhccccccccchhhhhhhHHH-HhcCCchhhccc
Confidence 999999999 79999999999999999999999999995 566779999999999999999999999 899999999999
Q ss_pred cCHHhH------H---HhhccCceeEEEeeCCCCCCCCceeEeeCCCCCCCCCCCCccccCCCCCCccCCccccCCChHH
Q 001813 193 IDYQDR------A---KRINEKTLEVVWRASKSLGSSAQIMTGISPKNYEPPSDNFYFEVGDTSPIVQDDMNLFDYNVPE 263 (1010)
Q Consensus 193 ~~~~~~------~---~~~~~~~~eF~W~~~d~~~~gs~i~th~~~~~Y~~p~~~f~f~~~~~~~~~~~~~~~~~~nv~~ 263 (1010)
+..... . ......-.|..|.+++ +++++-+.++..|..+ .. ... +....++-
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~----~~~~l~il~~~~y~~g-~~-----I~~---------~ghahid~ 210 (943)
T COG0383 150 GAALIGFGQLVLFELLEAYGSDFSEITWSEPD----GSQVLGILLANGYSNG-NE-----IPA---------VGHAHIDT 210 (943)
T ss_pred ccchhhcccchhhhhhhHhcCcCcccccccCC----chhhHHHHHHHHhhcc-cc-----ccc---------cchhhHHH
Confidence 643111 0 1112234567888888 8888888888888776 21 000 00011111
Q ss_pred HHHHHHHHHHHHhhhcCCCeEEEeecCCCCCcchHHHHHHHHHHHHHHhcC-CCeeEEEcC----hhhhHHHHHhc-CCC
Q 001813 264 RVNDFVSAAIAQANITRTNHIMWTMGTDFKYQYAHTWFRQMDKFIHYVNQD-GRVNALYST----PSMYIDAKYAA-NES 337 (1010)
Q Consensus 264 ~~~~~~~~~~~~~~~~~t~~il~~~G~Df~y~~a~~~f~~~~~li~~~N~~-~~~~i~~sT----~~~Yf~al~~~-~~~ 337 (1010)
....-++..++. ..+..++++.|+|..+.. .++...+++.|.- ......|+. ...|+...... ...
T Consensus 211 aWlw~l~et~r~---a~ts~~~~~~l~D~~p~~-----~~~~s~~~~y~~l~~d~p~l~~~~~v~~~~~~~~~g~~ve~d 282 (943)
T COG0383 211 AWLWPLDETERK---ASTSFSLVMNLMDHYPVQ-----KFVQSAAALYNWLKPDVPFLFSRPAVEFEQWEIVGGMWVEED 282 (943)
T ss_pred HHhccHHHHHHH---HhhhhhheecccccChhh-----hhhhhHHHHHHHhcCccHHHhhcccccccceEEeeccccccc
Confidence 112223333333 466778899999987765 6777777777742 334444444 44455443322 234
Q ss_pred CCCccCCCc-cccccCCCce--eeeecccchhhHHHHHhhHHHH-HHHHhhh-------hc---ccccCCCchHHHHHHH
Q 001813 338 WPLKTDDFF-PYADRENAYW--TGYFTSRPALKGYVRTMSAYYL-AARQLEF-------FK---GRNEVGLSTDSLADAL 403 (1010)
Q Consensus 338 ~p~~~gDf~-py~~~~~~yW--tG~yTSr~~~K~~~R~~e~~L~-~ae~l~~-------l~---~~~~~~~~~~~~w~~l 403 (1010)
.++.+||+. .-..+...|. -..-+||..+|..+-..+..|- -++.+.. ++ +..+|...+.-.|+.+
T Consensus 283 ~n~~sGEslsrq~~~gq~~~~~~f~~ssri~w~pd~fg~s~~Lpqil~p~gi~~f~t~klawn~tn~~Ph~~~~w~~~dg 362 (943)
T COG0383 283 LNTPSGESLSRQFLYGQRFFTEKFGASSRIYWKPDSFGFSGQLPQILEPLGIDVFVTTKLAWNDTNRFPHDLLRWRWKDG 362 (943)
T ss_pred CCccccchhhhhhhccceeeecccCccceeEeehhccccchhHHHHHHhhcchhhhccccchhhccCCChhHheeecccc
Confidence 688899986 2222212222 1445899999998777777654 3444433 22 2345666777789999
Q ss_pred HhhhccccccCccchhhHHHHHHHHHH
Q 001813 404 ALVQHHDAVSGTEKQHVADDYAKRLSI 430 (1010)
Q Consensus 404 ~~~QhHDaItGTs~~~V~~dy~~rl~~ 430 (1010)
..++.||.+|||+.+.|+.+...|...
T Consensus 363 ~e~~~hds~~~~~~d~v~~~~~~r~~~ 389 (943)
T COG0383 363 TENLAHDSICGCSSDPVHREMEYRFEK 389 (943)
T ss_pred cccceeecCCCCcccHHHHHHHhhhhh
Confidence 999999999999999999999888765
No 12
>PF03065 Glyco_hydro_57: Glycosyl hydrolase family 57; InterPro: IPR004300 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 57 GH57 from CAZY comprises enzymes with two known activities; alpha-amylase (3.2.1.1 from EC) and 4-alpha-glucanotransferase (2.4.1 from EC).; GO: 0003824 catalytic activity, 0005975 carbohydrate metabolic process; PDB: 1K1X_B 1K1W_A 1K1Y_A 3N98_A 3N8T_A 3N92_A 1UFA_A 3P0B_A.
Probab=98.42 E-value=7.2e-07 Score=102.17 Aligned_cols=122 Identities=19% Similarity=0.221 Sum_probs=92.6
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEechhHHHHHHhcCCHHH-----------------------------------------
Q 001813 70 VQNVLDSLIPALVADKNRKFIYVEQAFFQRWWRDQSEEV----------------------------------------- 108 (1010)
Q Consensus 70 v~~il~~vl~~L~~~p~~kF~~~e~~~~~~w~~~~~p~~----------------------------------------- 108 (1010)
..+.+--++..|++.|+.|++.+=...+.+++++..+..
T Consensus 28 ~~~~Y~pll~~l~~~~~~k~t~~lSp~LleqL~d~~~~~~~~~l~~~~~~~e~~~~~~~~~~~~~f~~~~~~~~l~~~~~ 107 (360)
T PF03065_consen 28 ATECYLPLLRLLERLPDFKLTFSLSPSLLEQLEDYAPQEYDQYLERSLARAELLREEKEFLLRANFTREDFERLLDFFRE 107 (360)
T ss_dssp HHHTHHHHHHHHHHHHH--EEEEE-HHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHTTSTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHhCcCccEEEEECHHHHHHHHhhhhhcccccccccccccccccccccccccccccccccccccccccc
Confidence 344455667777777767766654455568888777777
Q ss_pred -----HHHHHHHHHCCCEEEEcceeeeeccCCCCh-HHHHHHHHHHHHHHHHHcCCCCceeeecCCCCCchhhHHHHHhh
Q 001813 109 -----QNVVKQLVNSGQLELINGGMCMHDEAAPHY-IDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAE 182 (1010)
Q Consensus 109 -----~~~vk~lV~~GrlE~vgGgwv~~Dea~~~~-es~Irql~~G~~~l~~~fG~~p~v~w~~D~FGhs~~~p~ll~~~ 182 (1010)
.+.+|+|+++|++|++|++|..+=-.+..- +++..|+..|.+.+++.||.+|+..|.|. .+.+..+..++ ++
T Consensus 108 ~~~~ii~~~~~l~~~G~iEll~~~~~h~ilpl~~~~~d~~~Qi~~~~~~~~~~FG~~P~G~W~pE-~a~~~~l~~~l-~~ 185 (360)
T PF03065_consen 108 IIGDIIEAFRELAERGQIELLTSPYYHPILPLLPDPEDFRAQIEMGREYFKKHFGRRPRGFWLPE-CAYSPGLEEIL-AE 185 (360)
T ss_dssp TTT-HHHHHHHHHHTTSEEEEEE-TT-B-GGGSSHHHHHHHHHHHHHHHHHHHHSS--SBEE-GG-G-B-TTHHHHH-HH
T ss_pred hhhhhHHHHHHHHHCCCEEEEeCchHHHHHHHhCCHHHHHHHHHHHHHHHHHHhCCCCCceECcc-cccCHHHHHHH-HH
Confidence 899999999999999999998887778888 99999999999999999999999999999 78999999999 89
Q ss_pred cCCcEEEEeec
Q 001813 183 VGFDFLFFARI 193 (1010)
Q Consensus 183 ~G~~~~~~~R~ 193 (1010)
+||+++++.--
T Consensus 186 ~Gi~~~i~d~~ 196 (360)
T PF03065_consen 186 AGIRYTILDGH 196 (360)
T ss_dssp TT--EEEEECH
T ss_pred cCCEEEEECcH
Confidence 99999997643
No 13
>COG1543 Uncharacterized conserved protein [Function unknown]
Probab=96.23 E-value=0.0097 Score=67.25 Aligned_cols=122 Identities=16% Similarity=0.236 Sum_probs=93.4
Q ss_pred hhHHHHHHHHHHHHHhCCCCe----------EEEechhHHHHHHhcCCHHHHHHHHHHHHCCCEEEEcceeeeeccCCCC
Q 001813 68 ACVQNVLDSLIPALVADKNRK----------FIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPH 137 (1010)
Q Consensus 68 ~~v~~il~~vl~~L~~~p~~k----------F~~~e~~~~~~w~~~~~p~~~~~vk~lV~~GrlE~vgGgwv~~Dea~~~ 137 (1010)
.+..+.|+..++.+++...|. |..-+-.-....|+..+...-++||++.++|.+|+++.+.+-.---+-.
T Consensus 75 ~ry~~~Le~~~el~e~e~~R~~~~~~~~~~~~~~~~~~~~~~~~e~~d~~ll~~f~~~~~~g~ieilts~athg~lPll~ 154 (504)
T COG1543 75 DRYLRYLEWKIELSEKEEKRYADQSLRELAEFYIPEFLNARGYWEQYDGNLLEAFKELQRSGGIEILTSAATHGYLPLLG 154 (504)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCCceeeeehhhheehhhcC
Confidence 456666777777776554322 1111111124677888999999999999999999998877544322323
Q ss_pred -hHHHHHHHHHHHHHHHHHcCCCCceeeecCCCCCchhhHHHHHhhcCCcEEEEe
Q 001813 138 -YIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFA 191 (1010)
Q Consensus 138 -~es~Irql~~G~~~l~~~fG~~p~v~w~~D~FGhs~~~p~ll~~~~G~~~~~~~ 191 (1010)
-|++=-|+..|.+-..++||..|+--|.|. =++...++.+| +.+||++++.-
T Consensus 155 ~peAi~AQi~~g~~~ye~~fg~~P~GiWlPE-cay~pgie~~l-~~~Gi~yf~vd 207 (504)
T COG1543 155 GPEAIEAQILTGIELYEEHFGLAPKGIWLPE-CAYAPGIERIL-KDAGIEYFFVD 207 (504)
T ss_pred CchhhHHHHHHHHHHHHHHhCCCCCceechh-hccccchHHHH-HhcCceEEEec
Confidence 488899999999988899999999999995 79999999999 89999999875
No 14
>PF01522 Polysacc_deac_1: Polysaccharide deacetylase; InterPro: IPR002509 This domain is found in polysaccharide deacetylase. This family of polysaccharide deacetylases includes NodB (nodulation protein B from Rhizobium) which is a chitooligosaccharide deacetylase []. It also includes chitin deacetylase from yeast [], and endoxylanases which hydrolyses glucosidic bonds in xylan [].; GO: 0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, 0005975 carbohydrate metabolic process; PDB: 2IW0_A 2CC0_B 2VYO_A 2J13_A 2C71_A 2C79_A 1W1A_1 1W1B_1 1W17_A 1NY1_B ....
Probab=95.40 E-value=0.13 Score=48.88 Aligned_cols=104 Identities=17% Similarity=0.298 Sum_probs=75.2
Q ss_pred HHHHHHHHHHHHhCCC-CeEEEechhHHHHHHhcCCHHHHHHHHHHHHCCCEEEEcceeeeeccCCCChHHHHHHHHHHH
Q 001813 71 QNVLDSLIPALVADKN-RKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGH 149 (1010)
Q Consensus 71 ~~il~~vl~~L~~~p~-~kF~~~e~~~~~~w~~~~~p~~~~~vk~lV~~GrlE~vgGgwv~~Dea~~~~es~Irql~~G~ 149 (1010)
......+++.|+++.- ..|-.... +.. +..+.+++++++| +||.+-||.-++-...+.+.+.+++..+.
T Consensus 17 ~~~~~~~~~~l~~~~i~at~fv~~~-~~~--------~~~~~l~~l~~~G-~ei~~H~~~H~~~~~~~~~~~~~ei~~~~ 86 (123)
T PF01522_consen 17 RDNYDRLLPLLKKYGIPATFFVIGS-WVE--------RYPDQLRELAAAG-HEIGNHGWSHPNLSTLSPEELRREIERSR 86 (123)
T ss_dssp HTHHHHHHHHHHHTT--EEEEE-HH-HHH--------HHHHHHHHHHHTT--EEEEE-SSSSCGGGS-HHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHhcccceeeeeccc-ccc--------cccccchhHHHHH-HHHHhcCCcccccccCCHHHHHHHHHHHH
Confidence 4556778888888752 33433322 222 2278899999999 99999999999888889999999999999
Q ss_pred HHHHHHcCCCCceeeecCCCCC-chhhHHHHHhhcCCcE
Q 001813 150 RYIKEQFNVTPRIGWQIDPFGH-SAVQAYLLSAEVGFDF 187 (1010)
Q Consensus 150 ~~l~~~fG~~p~v~w~~D~FGh-s~~~p~ll~~~~G~~~ 187 (1010)
++|++.+|..|+. | .=|||. +...-+++ +++||++
T Consensus 87 ~~l~~~~g~~~~~-f-~~P~g~~~~~~~~~l-~~~G~~y 122 (123)
T PF01522_consen 87 EILEEITGRPPKG-F-RYPFGSYDDNTLQAL-REAGYKY 122 (123)
T ss_dssp HHHHHHHSSEESE-E-E-GGGEECHHHHHHH-HHTT-EE
T ss_pred HHHHHHhCCCCcE-E-ECCCCCCCHHHHHHH-HHcCCCc
Confidence 9999999994443 4 457776 67777999 8999987
No 15
>COG1449 Alpha-amylase/alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=94.78 E-value=0.75 Score=56.11 Aligned_cols=98 Identities=19% Similarity=0.268 Sum_probs=80.5
Q ss_pred EEEechhHHHHHHhcCCHHHHHHHHHHHHCCCEEEEcceeeeeccCCC----ChHHHHHHHHHHHHHHHHHcCCCCceee
Q 001813 89 FIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAP----HYIDMIDQTTLGHRYIKEQFNVTPRIGW 164 (1010)
Q Consensus 89 F~~~e~~~~~~w~~~~~p~~~~~vk~lV~~GrlE~vgGgwv~~Dea~~----~~es~Irql~~G~~~l~~~fG~~p~v~w 164 (1010)
|++++..-+..+-.+..++..+.+|++++.|+.|++.-.|--+=..+- -++++++|+..+.+..++-||+.|+..|
T Consensus 162 ys~~g~~~il~~~~~~~~~vl~~~r~l~e~g~~e~~~~pyyHsl~pl~~d~gw~~d~~~qv~~~~~~~~elfG~~p~~~~ 241 (615)
T COG1449 162 YSLSGGETILEQQLDEAPRVLEAFRELAESGKVELTASPYYHSLIPLLADDGWYEDFKEQVMMSRELYKELFGVWPSGFW 241 (615)
T ss_pred eeccccHHHHHHHHHHHhhhHHHHHHHHhcCceEEEecccccccchhcccCCchHHHHHHHHHHHHHHHHHhCCCCcccc
Confidence 777764344456666688899999999999999999888744333222 4569999999999999999999999999
Q ss_pred ecCCCCCchhhHHHHHhhcCCcEE
Q 001813 165 QIDPFGHSAVQAYLLSAEVGFDFL 188 (1010)
Q Consensus 165 ~~D~FGhs~~~p~ll~~~~G~~~~ 188 (1010)
.+- +=.+.++..++ +.+|+...
T Consensus 242 ~tE-l~y~~~i~~~~-~e~G~~~~ 263 (615)
T COG1449 242 NTE-LAYNDQILEYF-EESGFSWI 263 (615)
T ss_pred Chh-hhccHHHHHHH-HHcCCccc
Confidence 987 77999999999 89999964
No 16
>TIGR03212 uraD_N-term-dom putative urate catabolism protein. This model represents a protein that is predominantly found just upstream of the UraD protein (OHCU decarboxylase) and in a number of instances as a N-terminal fusion with it. UraD itself catalyzes the last step in the catabolism of urate to allantoate. The function of this protein is presently unknown. It shows homology with the pfam01522 polysaccharide deacetylase domain family.
Probab=92.52 E-value=10 Score=42.13 Aligned_cols=111 Identities=18% Similarity=0.130 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHHhCCC-CeEEEechhHHHHHHhcCCHHHHHHHHHHHHCCCEEEEcceeeeeccCCCChHHHHHHHHHH
Q 001813 70 VQNVLDSLIPALVADKN-RKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLG 148 (1010)
Q Consensus 70 v~~il~~vl~~L~~~p~-~kF~~~e~~~~~~w~~~~~p~~~~~vk~lV~~GrlE~vgGgwv~~Dea~~~~es~Irql~~G 148 (1010)
.+.-+-.+++.|+++-- .+|-... |+.+.+|+ .+|+++++| .||.+=||...+-..-+.+...++|..+
T Consensus 75 ~rvG~~RiLdlL~~~gv~aTffv~g------~~~e~~P~---~v~~i~~~G-HEIg~Hg~~H~~~~~ls~~~e~~~i~~s 144 (297)
T TIGR03212 75 SRAGFWRLLRLFTERGIPVTVFGVA------MALARNPE---AVAAMKEAG-WEIASHGLRWIDYQDMDEAQEREHIAEA 144 (297)
T ss_pred chhCHHHHHHHHHHcCCCEEEEeEH------HHHHHCHH---HHHHHHHcC-CEEeeccccCcccccCCHHHHHHHHHHH
Confidence 34556678888888753 3454443 34455666 466677889 8999999987776667888999999999
Q ss_pred HHHHHHHcCCCCceeeecCCCCCchhhHHHHHhh-cCCcEEEEeecC
Q 001813 149 HRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAE-VGFDFLFFARID 194 (1010)
Q Consensus 149 ~~~l~~~fG~~p~v~w~~D~FGhs~~~p~ll~~~-~G~~~~~~~R~~ 194 (1010)
.+-|++..|.+| .||.. -.+|..++.|+ ++ .||.+..-...+
T Consensus 145 ~~~i~~~tG~~P-~G~~~--~~~s~~T~~LL-~e~~Gf~Y~sd~~~d 187 (297)
T TIGR03212 145 IRLHTEVTGERP-LGWYT--GRTSPNTRRLV-AEEGGFLYDADSYAD 187 (297)
T ss_pred HHHHHHHhCCCC-ceEEC--CCCChhHHHHH-HHhcCceEeCchhhc
Confidence 998888888764 56653 36899999999 88 999987654443
No 17
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=92.46 E-value=0.95 Score=48.23 Aligned_cols=101 Identities=15% Similarity=0.173 Sum_probs=76.6
Q ss_pred HHHHHHHhCCC-CeEEEechhHHHHHHhcCCHHHHHHHHHHHHCCCEEEEcceeeeeccCCCChHHHHHHHHHHHHHHHH
Q 001813 76 SLIPALVADKN-RKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIKE 154 (1010)
Q Consensus 76 ~vl~~L~~~p~-~kF~~~e~~~~~~w~~~~~p~~~~~vk~lV~~GrlE~vgGgwv~~Dea~~~~es~Irql~~G~~~l~~ 154 (1010)
.+++.|+++-- .+|-..+. |. +..| +.+|+++++|. ||-+-+|.-++-...+.+.+.+++....+.|.+
T Consensus 54 ~lL~~L~~~~vkATFFv~G~-----~~-~~~p---~~ir~i~~~Gh-eIgnHt~~H~~~~~ls~~~~~~ei~~~~~~i~~ 123 (224)
T TIGR02884 54 KILDVLKEKKVPAAFFVTGH-----YI-KTQP---DLIKRMVDEGH-IVGNHSVHHPSLTAVNDEKFKEELTGVEEEFKK 123 (224)
T ss_pred HHHHHHHHcCCCeEEEeech-----hh-HHCH---HHHHHHHHcCC-EeeecCccCcCcccCCHHHHHHHHHHHHHHHHH
Confidence 46778877753 34444432 22 2344 67899999995 688999988887778899999999999999999
Q ss_pred HcCCCCceeeecCCCC-CchhhHHHHHhhcCCcEE
Q 001813 155 QFNVTPRIGWQIDPFG-HSAVQAYLLSAEVGFDFL 188 (1010)
Q Consensus 155 ~fG~~p~v~w~~D~FG-hs~~~p~ll~~~~G~~~~ 188 (1010)
..|..+ ..|.-=|+| ++..+.+++ +++|+..+
T Consensus 124 ~~G~~~-~~~fR~P~G~~~~~~~~~l-~~~Gy~~v 156 (224)
T TIGR02884 124 VTGQKE-MKYFRPPRGVFSERTLAYT-KELGYYTV 156 (224)
T ss_pred HhCCCC-CCEEeCCCCCcCHHHHHHH-HHcCCcEE
Confidence 988762 336667899 577888999 89999864
No 18
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=92.19 E-value=1.3 Score=45.72 Aligned_cols=101 Identities=14% Similarity=0.243 Sum_probs=75.1
Q ss_pred HHHHHHHHhCCC-CeEEEechhHHHHHHhcCCHHHHHHHHHHHHCCCEEEEcceeeeeccCCCChHHHHHHHHHHHHHHH
Q 001813 75 DSLIPALVADKN-RKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIK 153 (1010)
Q Consensus 75 ~~vl~~L~~~p~-~kF~~~e~~~~~~w~~~~~p~~~~~vk~lV~~GrlE~vgGgwv~~Dea~~~~es~Irql~~G~~~l~ 153 (1010)
..+++.|+++.- .+|-..+. |. +.+| +.+++++++|- ||-+-+|.-++-...+.+.+.+++..+.+.++
T Consensus 22 ~~~l~~L~~~~ikaTfFv~g~-----~~-~~~~---~~~~~i~~~Gh-eig~Ht~~H~~~~~~~~~~~~~ei~~~~~~l~ 91 (191)
T TIGR02764 22 EPILDTLKEYDVKATFFLSGS-----WA-ERHP---ELVKEIVKDGH-EIGSHGYRHKNYTTLEDEKIKKDILRAQEIIE 91 (191)
T ss_pred HHHHHHHHHcCCCEEEEeccH-----HH-HHCH---HHHHHHHhCCC-EEEECCcCCCCcccCCHHHHHHHHHHHHHHHH
Confidence 456777877753 34443332 22 2344 57889999995 89999999888777889999999999999999
Q ss_pred HHcCCCCceeeecCCCC-CchhhHHHHHhhcCCcEE
Q 001813 154 EQFNVTPRIGWQIDPFG-HSAVQAYLLSAEVGFDFL 188 (1010)
Q Consensus 154 ~~fG~~p~v~w~~D~FG-hs~~~p~ll~~~~G~~~~ 188 (1010)
+..|..|+ |--=|+| ++..+..++ ++.|+..+
T Consensus 92 ~~~g~~~~--~fr~P~G~~~~~~~~~l-~~~G~~~v 124 (191)
T TIGR02764 92 KLTGKKPT--LFRPPSGAFNKAVLKAA-ESLGYTVV 124 (191)
T ss_pred HHhCCCCC--EEECCCcCCCHHHHHHH-HHcCCeEE
Confidence 99998875 3445676 466678888 89998854
No 19
>TIGR03006 pepcterm_polyde polysaccharide deactylase family protein, PEP-CTERM locus subfamily. Members of this protein family belong to the family of polysaccharide deacetylases (pfam01522). All are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria, and are found near the epsH homolog that is the putative exosortase gene. The highest scoring homologs below the trusted cutoff for this model are found in several species of Methanosarcina, an archaeal genus.
Probab=90.76 E-value=2.2 Score=46.61 Aligned_cols=112 Identities=16% Similarity=0.239 Sum_probs=81.8
Q ss_pred hhHHHHHHHHHHHHHhCCC-CeEEEechhHHHHHHhcCCHHHHHHHHHHHHCCCEEEEcceeeeeccCCCChHHHHHHHH
Q 001813 68 ACVQNVLDSLIPALVADKN-RKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTT 146 (1010)
Q Consensus 68 ~~v~~il~~vl~~L~~~p~-~kF~~~e~~~~~~w~~~~~p~~~~~vk~lV~~GrlE~vgGgwv~~Dea~~~~es~Irql~ 146 (1010)
.+|...+..+++.|+++-- .+|-..+ |+.+..| +.+|+++++| .||.+=||.-.+-..-+.+.+..++.
T Consensus 24 ~rv~~nt~riL~lL~~~gikATFFv~g------~~~e~~p---~lir~i~~~G-hEIgsHg~sH~~l~~ls~ee~~~eI~ 93 (265)
T TIGR03006 24 CRVERNTDRILDLLDRHGVKATFFTLG------WVAERYP---ELVRRIVAAG-HELASHGYGHERVTTQTPEAFRADIR 93 (265)
T ss_pred chHHHhHHHHHHHHHHcCCcEEEEEec------cchhhCH---HHHHHHHHcC-CEeeeccccCcCchhCCHHHHHHHHH
Confidence 4667778889999998753 4444432 3444556 4589999999 69999999877766678899999999
Q ss_pred HHHHHHHHHcCCCCceeeecCCCCCc---hhhHHHHHhhcCCcEEEEe
Q 001813 147 LGHRYIKEQFNVTPRIGWQIDPFGHS---AVQAYLLSAEVGFDFLFFA 191 (1010)
Q Consensus 147 ~G~~~l~~~fG~~p~v~w~~D~FGhs---~~~p~ll~~~~G~~~~~~~ 191 (1010)
...+.|++..|..|+ +|-.=.+..+ .....++ +++||.+..-.
T Consensus 94 ~s~~~Le~itG~~~~-gfRaP~~s~~~~t~~a~~iL-~e~Gy~YdsS~ 139 (265)
T TIGR03006 94 RSKALLEDLSGQPVR-GYRAPSFSIGKKNLWALDVL-AEAGYRYSSSI 139 (265)
T ss_pred HHHHHHHHHhCCCce-EEECCCCCCCCCcHHHHHHH-HHCCCEEEEee
Confidence 999999888888766 4543323233 3346899 89999986543
No 20
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=89.52 E-value=3.3 Score=45.31 Aligned_cols=101 Identities=21% Similarity=0.352 Sum_probs=77.6
Q ss_pred HHHHHHHHHhCCC-CeEEEechhHHHHHHhcCCHHHHHHHHHHHHCCCEEEEcceeeeeccCCCChHHHHHHHHHHHHHH
Q 001813 74 LDSLIPALVADKN-RKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYI 152 (1010)
Q Consensus 74 l~~vl~~L~~~p~-~kF~~~e~~~~~~w~~~~~p~~~~~vk~lV~~GrlE~vgGgwv~~Dea~~~~es~Irql~~G~~~l 152 (1010)
...+++.|+++-- .+|-..+ .|. +.+| +.+|+++++|. ||-+=+|.-++-..-+.+.+.+++..+.+.+
T Consensus 100 t~~iL~iLkk~~vkATFFv~G-----~~i-~~~p---~l~k~i~~~Gh-eIGnHT~sH~~l~~ls~~~~~~Ei~~~~~~i 169 (268)
T TIGR02873 100 LPEILQILKKHDVKATFFLEG-----KWV-KENS---QLAKMIVEQGH-EIGNHAYNHPDMATLSKEEIYDQINQTNEII 169 (268)
T ss_pred HHHHHHHHHHCCCCEEEEeeh-----Hhh-hHCH---HHHHHHHHCCC-EEEecCCcCCCcccCCHHHHHHHHHHHHHHH
Confidence 4467888887753 4454443 233 2345 45788899995 7999999988888888999999999999999
Q ss_pred HHHcCCCCceeeecCCCCC-chhhHHHHHhhcCCcE
Q 001813 153 KEQFNVTPRIGWQIDPFGH-SAVQAYLLSAEVGFDF 187 (1010)
Q Consensus 153 ~~~fG~~p~v~w~~D~FGh-s~~~p~ll~~~~G~~~ 187 (1010)
.+..|..|+ |.-=|+|. +..+.+++ +++|+..
T Consensus 170 ~~~~G~~p~--~fRpP~G~~n~~~~~~l-~~~G~~~ 202 (268)
T TIGR02873 170 EATIGVTPK--WFAPPSGSFNDNVVQIA-ADLQMGT 202 (268)
T ss_pred HHHhCCCCC--EEECCCCCCCHHHHHHH-HHCCCeE
Confidence 999998877 66668886 56778888 8999864
No 21
>PRK14582 pgaB outer membrane N-deacetylase; Provisional
Probab=83.93 E-value=29 Score=42.88 Aligned_cols=80 Identities=19% Similarity=0.323 Sum_probs=61.2
Q ss_pred HHHHHHHHCCCEEEEcceeeeeccC--------------------CCChH-------HHHHHHHHHHHHHHHHcCCCCce
Q 001813 110 NVVKQLVNSGQLELINGGMCMHDEA--------------------APHYI-------DMIDQTTLGHRYIKEQFNVTPRI 162 (1010)
Q Consensus 110 ~~vk~lV~~GrlE~vgGgwv~~Dea--------------------~~~~e-------s~Irql~~G~~~l~~~fG~~p~v 162 (1010)
+.||+++++|-+||-+=+|..|.-. ...|| .+.+.+..+.+.|++..|..|++
T Consensus 168 eqIreM~~sGlvEIGSHT~~sH~~l~anp~g~~~pa~~~r~~~~~~~~yEs~~e~~~ri~~DL~~s~~~Ie~~tG~~p~~ 247 (671)
T PRK14582 168 QQVREVARSRLVEIASHTWNSHYGIQANPQGSLLPAAVNRAYFTDHARYETAAEYRERIRLDAVKMTEYIRTKAGKNPRV 247 (671)
T ss_pred HHHHHHHhCCCeEEEcCCchhccccccccccccccchhcccccccccccccHHHHHHHHHHHHHHHHHHHHHHhCCCCcE
Confidence 6899999999999988888655311 11222 26678999999999999998875
Q ss_pred eeecCCCCC-chhhHHHHHhhcCCcEEEEee
Q 001813 163 GWQIDPFGH-SAVQAYLLSAEVGFDFLFFAR 192 (1010)
Q Consensus 163 ~w~~D~FGh-s~~~p~ll~~~~G~~~~~~~R 192 (1010)
..=|||+ +.....++ +++||+..+..+
T Consensus 248 --FayPyG~~n~~~~~ia-keaGY~~afT~~ 275 (671)
T PRK14582 248 --WVWPYGEANGIALEEL-KKLGYDMAFTLE 275 (671)
T ss_pred --EecCCCCCCHHHHHHH-HHCCCeEEEEeC
Confidence 4557884 56778898 899999887654
No 22
>PRK14581 hmsF outer membrane N-deacetylase; Provisional
Probab=80.76 E-value=8.2 Score=47.54 Aligned_cols=81 Identities=17% Similarity=0.272 Sum_probs=62.3
Q ss_pred HHHHHHHHHCCCEEEEcceeeeecc--------------------CCCChHH-------HHHHHHHHHHHHHHHcCCCCc
Q 001813 109 QNVVKQLVNSGQLELINGGMCMHDE--------------------AAPHYID-------MIDQTTLGHRYIKEQFNVTPR 161 (1010)
Q Consensus 109 ~~~vk~lV~~GrlE~vgGgwv~~De--------------------a~~~~es-------~Irql~~G~~~l~~~fG~~p~ 161 (1010)
.+.||+++++|-+||-+=+|..+.- ....+|+ +-+.+....+.|++..|..|+
T Consensus 167 W~qIrEM~~sGLvEIGSHT~sHh~~~~~np~g~~~pa~~~~~y~~~~~~yEs~~~~~~rl~~Di~~s~~~Ie~~lG~~p~ 246 (672)
T PRK14581 167 WKQITEMSKSGLVEIGAHTYASHYGVIANPQGNTEPAAANLQYDPKTKQYETVEAFKQRMEKDVALITQRIVQATGKQPR 246 (672)
T ss_pred HHHHHHHHHCCCcEEEcCCcccccccccCccccccchhhhccccccccccccHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 3689999999999999999877631 1122433 556688888989999999877
Q ss_pred eeeecCCCCC-chhhHHHHHhhcCCcEEEEee
Q 001813 162 IGWQIDPFGH-SAVQAYLLSAEVGFDFLFFAR 192 (1010)
Q Consensus 162 v~w~~D~FGh-s~~~p~ll~~~~G~~~~~~~R 192 (1010)
. ..=|||+ +...-+++ +++||+..+..+
T Consensus 247 ~--FayPyG~yn~~~~~ia-k~aGy~~afTt~ 275 (672)
T PRK14581 247 V--WVWPYGAPNGTVLNIL-RQHGYQLAMTLD 275 (672)
T ss_pred E--EEcCCCCcCHHHHHHH-HHCCCcEEEECC
Confidence 5 4468984 77888999 899999888655
No 23
>PRK15394 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD; Provisional
Probab=70.86 E-value=1.8e+02 Score=32.41 Aligned_cols=81 Identities=11% Similarity=0.027 Sum_probs=60.4
Q ss_pred HHHHHHHHCCCEEEEcceeeee----ccCCCChHHHHHHHHHHHHHHHHHcCCCCceeeecCCCCCchhhHHHHHhhcCC
Q 001813 110 NVVKQLVNSGQLELINGGMCMH----DEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGF 185 (1010)
Q Consensus 110 ~~vk~lV~~GrlE~vgGgwv~~----Dea~~~~es~Irql~~G~~~l~~~fG~~p~v~w~~D~FGhs~~~p~ll~~~~G~ 185 (1010)
+.+|+.+++ .|+.+=||.-. ....-+.+.+.++|..+.+-|++..|..|+ +|-+=.+-.+..+..++ +++||
T Consensus 92 ~lvr~i~~~--HEIG~Hg~~H~~wq~~~~~ls~~e~~~eI~ra~~~Le~itG~~p~-g~raPgw~~~~~tl~ll-~e~Gf 167 (296)
T PRK15394 92 DIIREAAKA--HEVGLHAWDHHAWQAWSGVWSRQQLIEQIARGVDALEEIIGQPVT-CSAAAGWRADQRVVEAK-EAFGF 167 (296)
T ss_pred HHHHHHHhc--CEehhcccCccchhcccccCCHHHHHHHHHHHHHHHHHHhCCCCC-EEeCCCccCCHHHHHHH-HHcCC
Confidence 356666666 99988899754 234457788999999999988888887753 45554555678889999 89999
Q ss_pred cEEEEeecC
Q 001813 186 DFLFFARID 194 (1010)
Q Consensus 186 ~~~~~~R~~ 194 (1010)
.|-.-.|.+
T Consensus 168 ~Y~Ss~~~d 176 (296)
T PRK15394 168 RYNSDCRGT 176 (296)
T ss_pred eeecCCCCC
Confidence 998544443
No 24
>PF07481 DUF1521: Domain of Unknown Function (DUF1521); InterPro: IPR011086 This domain of unknown function is found in a limited set of Bradyrhizobium proteins. There appears to be a periodic -DG- motif in the domain.
Probab=69.85 E-value=40 Score=33.19 Aligned_cols=95 Identities=11% Similarity=0.080 Sum_probs=53.8
Q ss_pred CceEEc-CCeEEEEEeCCCCeEEEEEecCCCcEEEEEEEEEEeecCCCCCCCCCCcceeEeCCCCCccCCCCCceEEEEe
Q 001813 595 DTIEVG-PGNLKLLYSGKRAKLMRYINSKTSVNKLLEQSYIYYRGDDGSKDLQPSGAYIFRPNGTYPIEPEGQLSFTILR 673 (1010)
Q Consensus 595 ~~~~ie-N~~~~v~~~~~~G~l~sl~dk~~g~~~~~~~~~~~Y~~~~g~~~~~~sGAY~F~P~~~~~~~~~~~~~i~v~~ 673 (1010)
+.-.|+ ++.|+|+++..++.+. |++|++|....+--+-.+.....| --+++|.-.. .+.+.....|.|..
T Consensus 8 gkati~lgd~Y~I~~~e~ds~~~-itnk~tG~~TriwGDPHvd~~Gdg------~~~fDFk~~~--tf~L~DGTKItV~T 78 (171)
T PF07481_consen 8 GKATIDLGDGYTIEANEKDSEWT-ITNKQTGETTRIWGDPHVDADGDG------KTDFDFKGDM--TFQLDDGTKITVDT 78 (171)
T ss_pred CeeEEecCCceEEEecCCcceEE-EecCCCCcEeEEeCCCccccCCCc------ccceeecCce--EEEeCCCCEEEEee
Confidence 345666 7789999996688998 999999998875544333211111 1357776332 34444434454432
Q ss_pred CCceEEEEEEEcCeEEEEEEEEcCCCceEEE
Q 001813 674 GPLLDEVHQRINPWIYQVTRVYKGKDHAEIE 704 (1010)
Q Consensus 674 Gpl~~~v~~~~~~~i~~~irLy~~~~~ie~e 704 (1010)
=|.-. +..++..+.|.++...+.++
T Consensus 79 ~p~gn------g~T~askLtIt~Gd~~~~V~ 103 (171)
T PF07481_consen 79 VPWGN------GMTYASKLTITNGDNAWQVE 103 (171)
T ss_pred eecCC------CcEEeeeEEEEcCCceEEEe
Confidence 22111 12334455666776666655
No 25
>PF08672 APC2: Anaphase promoting complex (APC) subunit 2; InterPro: IPR014786 The anaphase-promoting complex (APC) or cyclosome is a multi-subunit E3 protein ubiquitin ligase that regulates important events in mitosis such as the initiation of anaphase and exit from telophase. The APC, in conjunction with other enzymes, assembles multi-ubiquitin chains on a variety of regulatory proteins, thereby targeting them for proteolysis by the 26S proteasome. Anaphase is initiated when the APC triggers the destruction of securin, thereby allowing the protease, separase, to disrupt sister-chromatid cohesion. Securin ubiquitination by the APC is inhibited by cyclin-dependent kinase 1 (Cdk1)-dependent phosphorylation []. Forkhead Box M1 (FoxM1), which is a transcription factor that is over-expressed in many cancers, is degraded in late mitosis and early G1 phase by the APC/cyclosome (APC/C) E3 ubiquitin ligase []. The APC/C targets mitotic cyclins for destruction in mitosis and G1 phase and is then inactivated at S phase. It thereby generates alternating states of high and low cyclin-Cdk activity, which is required for the alternation of mitosis and DNA replication []. The APC/C is composed of at least 13 subunits that stay tightly associated throughout the cell cycle: APC1, APC2, APC4, APC5, APC9, APC11, CDC16, CDC23, CDC26, CDC27, DOC1, MND2 and SWM1[], []. In fission yeast the 13 subunits are known as: Apc1, Apc2, Nuc2, Apc4, Apc5, Cut9, Apc8, Apc10, Apc11, Hcn1, Apc13, Apc14 and Apc15 []. This entry represents a C-terminal domain found in APC subunit 2. ; PDB: 1LDD_A.
Probab=63.47 E-value=8.6 Score=31.62 Aligned_cols=23 Identities=39% Similarity=0.647 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHCCCEEEEccee
Q 001813 106 EEVQNVVKQLVNSGQLELINGGM 128 (1010)
Q Consensus 106 p~~~~~vk~lV~~GrlE~vgGgw 128 (1010)
++.++-+.++|++|+||++||-|
T Consensus 36 ~eL~~fL~~lv~e~~L~~~~G~Y 58 (60)
T PF08672_consen 36 EELQEFLDRLVEEGKLECSGGSY 58 (60)
T ss_dssp HHHHHHHHHHHHTTSEE--TTEE
T ss_pred HHHHHHHHHHHHCCcEEecCCEE
Confidence 45666678999999999999987
No 26
>PF06044 DRP: Dam-replacing family; InterPro: IPR010324 Dam-replacing protein (DRP) is a restriction endonuclease that is flanked by pseudo-transposable small repeat elements. The replacement of Dam-methylase by DRP allows phase variation through slippage-like mechanisms in several pathogenic isolates of Neisseria meningitidis [].; PDB: 4ESJ_A.
Probab=31.65 E-value=74 Score=33.73 Aligned_cols=58 Identities=12% Similarity=0.192 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHhCCCCeEEEechhHHHHHHhcCCHH-------HHHHHHHHHHCCCEEEEccee
Q 001813 71 QNVLDSLIPALVADKNRKFIYVEQAFFQRWWRDQSEE-------VQNVVKQLVNSGQLELINGGM 128 (1010)
Q Consensus 71 ~~il~~vl~~L~~~p~~kF~~~e~~~~~~w~~~~~p~-------~~~~vk~lV~~GrlE~vgGgw 128 (1010)
+--+-.++.-+++-|..-|+.+++.-|+.-....+|. .|+.++-|-..|-|||+|-|-
T Consensus 186 rGWlldi~~cid~i~~~~FtL~diY~Fe~~L~~~~P~N~~Ik~KIRQqLQ~LRD~g~IeFl~rG~ 250 (254)
T PF06044_consen 186 RGWLLDIMKCIDKIPKNEFTLDDIYAFEDELQIKYPNNNHIKAKIRQQLQILRDKGIIEFLGRGR 250 (254)
T ss_dssp HHHHHHHHHHHHHS-SSEEEHHHHHTTHHHHHHHSTT-S-HHHHHHHHHHHHHHTTSEEE-STTE
T ss_pred cchHHHHHHHHHhcCccceeHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHhhCCceEEecCCc
Confidence 4455567777778888899999998888888887773 556666677799999999874
No 27
>TIGR03826 YvyF flagellar operon protein TIGR03826. This gene is found in flagellar operons of Bacillus-related organisms. Its function has not been determined and an official gene symbol has not been assigned, although the gene is designated yvyF in B. subtilus. A tentative assignment as a regulator is suggested in the NCBI record GI:16080597.
Probab=30.27 E-value=46 Score=32.36 Aligned_cols=52 Identities=13% Similarity=0.223 Sum_probs=38.6
Q ss_pred hhHHHHHHHHHHHHHhCCCCeEEEechhHHHHHHhcCCHHHHHHHHHHHHCCCEEEEcc
Q 001813 68 ACVQNVLDSLIPALVADKNRKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELING 126 (1010)
Q Consensus 68 ~~v~~il~~vl~~L~~~p~~kF~~~e~~~~~~w~~~~~p~~~~~vk~lV~~GrlE~vgG 126 (1010)
.....-+..|-+.|.++|++.-+..|++ +...-..+.|.++|++|||++...
T Consensus 26 ~~~e~~f~kV~~yLr~~p~~~ati~eV~-------e~tgVs~~~I~~~IreGRL~~~~~ 77 (137)
T TIGR03826 26 EEEEREFEKVYKFLRKHENRQATVSEIV-------EETGVSEKLILKFIREGRLQLKHF 77 (137)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCHHHHH-------HHHCcCHHHHHHHHHcCCeeccCC
Confidence 3456778888899999999776655543 234445678999999999997753
No 28
>COG0726 CDA1 Predicted xylanase/chitin deacetylase [Carbohydrate transport and metabolism]
Probab=27.03 E-value=5.1e+02 Score=27.36 Aligned_cols=115 Identities=15% Similarity=0.154 Sum_probs=79.0
Q ss_pred CccccchheeeeccCccchhhhHHHHHHHHHHHHHhCCC-CeEEEechhHHHHHHhcCCHHHHHHHHHHHHCCCEEEEcc
Q 001813 48 VGWLKTVDQYYVGSNNSIQVACVQNVLDSLIPALVADKN-RKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELING 126 (1010)
Q Consensus 48 ~gWl~t~~ey~~~~~~~i~~~~v~~il~~vl~~L~~~p~-~kF~~~e~~~~~~w~~~~~p~~~~~vk~lV~~GrlE~vgG 126 (1010)
.--..|||..+. .. ....+++.|+++-- .+|-..+ .|.+..|+..+++.+ +|.- +-.=
T Consensus 65 k~v~lTFDDg~~--------~~---~~~~il~iL~k~~i~ATfFv~g------~~i~~~p~~~~~~~~---~Ghe-ig~H 123 (267)
T COG0726 65 KAVALTFDDGPL--------DG---NTPRILPLLKKYGIKATFFVVG------SWIERNPDLVKRIAE---AGHE-IGNH 123 (267)
T ss_pred CeEEEEeecCCC--------CC---CcHHHHHHHHHcCCceEEEEeh------HhhHHCHHHHHHHHh---ccCe-ehhC
Confidence 334567887764 21 56677888887753 4555544 444556665544444 6665 7788
Q ss_pred eeeeeccCCCChHHHHHHHHHHHHHHHHHcCCCCceeeecCCCCC-chhhHHHHHhhcCCc
Q 001813 127 GMCMHDEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGH-SAVQAYLLSAEVGFD 186 (1010)
Q Consensus 127 gwv~~Dea~~~~es~Irql~~G~~~l~~~fG~~p~v~w~~D~FGh-s~~~p~ll~~~~G~~ 186 (1010)
+|--.+....+.+.+..++...+..+.+..|.. .-|.--|.|. +...-.+. +..|+.
T Consensus 124 ~~~h~~~~~~~~~~~~~~i~~~~~~l~~~~g~~--~~~~r~p~g~~~~~~~~~~-~~~g~~ 181 (267)
T COG0726 124 GYDHPDLQDLSLEELGAEIARAHDILKKITGGR--PRGFRPPYGSYNESSLALA-RRLGYR 181 (267)
T ss_pred cccCCCcccCCHHHHHHHHHHHHHHHHHHhCCC--CceEECCCCccCHHHHHHH-HhCCCc
Confidence 887777777888888999999999999999988 3344455664 46667777 788886
No 29
>PRK10148 hypothetical protein; Provisional
Probab=26.25 E-value=25 Score=34.73 Aligned_cols=17 Identities=24% Similarity=0.233 Sum_probs=14.6
Q ss_pred CceeeecCCCCCchhhH
Q 001813 160 PRIGWQIDPFGHSAVQA 176 (1010)
Q Consensus 160 p~v~w~~D~FGhs~~~p 176 (1010)
++.||..|+||++|++-
T Consensus 123 ~~~g~v~D~fGi~W~l~ 139 (147)
T PRK10148 123 HGFGKVTDKFGVPWMIN 139 (147)
T ss_pred hccEEEECCCCCEEEEE
Confidence 46799999999999864
No 30
>PF12395 DUF3658: Protein of unknown function ; InterPro: IPR022123 This domain family is found in bacteria, and is approximately 110 amino acids in length. The family is found in association with PF08874 from PFAM. There are two completely conserved residues (D and R) that may be functionally important.
Probab=25.66 E-value=1.1e+02 Score=28.66 Aligned_cols=69 Identities=16% Similarity=0.260 Sum_probs=44.9
Q ss_pred EEEEEecccCCCccccchheeeeccCccchhhhHHHHHHHHHHHHHhCCCCeEEEechhHHHHHHhcCCHHHHHHHHHHH
Q 001813 37 NVHLVPHSHDDVGWLKTVDQYYVGSNNSIQVACVQNVLDSLIPALVADKNRKFIYVEQAFFQRWWRDQSEEVQNVVKQLV 116 (1010)
Q Consensus 37 ~V~lvpHSH~D~gWl~t~~ey~~~~~~~i~~~~v~~il~~vl~~L~~~p~~kF~~~e~~~~~~w~~~~~p~~~~~vk~lV 116 (1010)
+|.=+|=.|.|.--+.....-| .++.+++-.|+..+.... ..|| ..-++++||
T Consensus 40 ~i~sv~ed~yD~~Il~~~~~~~---------~~~arvIg~vl~~~~~~i------------~D~f------~~~Ri~~Li 92 (111)
T PF12395_consen 40 KIVSVPEDYYDDFILEQAPDEF---------QKAARVIGEVLGHSDQGI------------GDWF------LEYRIRELI 92 (111)
T ss_pred eEEecChHHhhHHHHhcCCccc---------cHHHHHHHHHHHhcCcCC------------ChHH------HHHHHHHHH
Confidence 4555566777777777554444 466777777777652221 1233 345899999
Q ss_pred HCCCEEEEcceeeeec
Q 001813 117 NSGQLELINGGMCMHD 132 (1010)
Q Consensus 117 ~~GrlE~vgGgwv~~D 132 (1010)
++|+||+.|..-.|.+
T Consensus 93 ~~G~le~~g~~~~mr~ 108 (111)
T PF12395_consen 93 SQGVLEIKGDPKDMRH 108 (111)
T ss_pred HCCCEEEecCCCcccc
Confidence 9999999887655543
No 31
>TIGR03593 yidC_nterm membrane protein insertase, YidC/Oxa1 family, N-terminal domain. Essentially all bacteria have a member of the YidC family, whose C-terminal domain is modeled by TIGR03592. The two copies are found in endospore-forming bacteria such as Bacillus subtilis appear redundant during vegetative growth, although the member designated spoIIIJ (stage III sporulation protein J) has a distinct role in spore formation. YidC, its mitochondrial homolog Oxa1, and its chloroplast homolog direct insertion into the bacterial/organellar inner (or only) membrane. This model describes an N-terminal sequence region, including a large periplasmic domain lacking in YidC members from Gram-positive species. The multifunctional YidC protein acts both with and independently of the Sec system.
Probab=24.29 E-value=3.9e+02 Score=30.59 Aligned_cols=28 Identities=21% Similarity=0.106 Sum_probs=23.5
Q ss_pred CceEEcCCeEEEEEeCCCCeEEEEEecC
Q 001813 595 DTIEVGPGNLKLLYSGKRAKLMRYINSK 622 (1010)
Q Consensus 595 ~~~~ieN~~~~v~~~~~~G~l~sl~dk~ 622 (1010)
..++|+|+.++++|+...|.|.++.-|+
T Consensus 74 ~~i~v~td~~~~~is~~Gg~i~~~~Lk~ 101 (366)
T TIGR03593 74 KRITVKTDVLRASISTKGGDIDSLELKK 101 (366)
T ss_pred CeEEEECCeEEEEEeCCCceeeeecccc
Confidence 4688999999999997677999887664
No 32
>PF10074 DUF2285: Uncharacterized conserved protein (DUF2285); InterPro: IPR018754 This entry contains uncharacterised proteins of unknown function.
Probab=21.05 E-value=19 Score=33.46 Aligned_cols=29 Identities=24% Similarity=0.590 Sum_probs=24.8
Q ss_pred HHHHhcCCHHHHHHHHHHHHCCCEEEEcceee
Q 001813 98 QRWWRDQSEEVQNVVKQLVNSGQLELINGGMC 129 (1010)
Q Consensus 98 ~~w~~~~~p~~~~~vk~lV~~GrlE~vgGgwv 129 (1010)
..||+. ...+.+++.+|+.|++ ++.|||-
T Consensus 74 ~~~W~~--~~~R~~~~rll~~a~~-l~~gGYr 102 (106)
T PF10074_consen 74 ADEWKD--SSLRRRVRRLLRRARA-LMEGGYR 102 (106)
T ss_pred cccccC--hHHHHHHHHHHHHHHH-HHHhhHH
Confidence 367875 7899999999999999 8999983
Done!