Query 001813
Match_columns 1010
No_of_seqs 243 out of 1259
Neff 8.3
Searched_HMMs 29240
Date Tue Mar 26 17:22:46 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001813.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1107-1111//hhsearch_pdb/001813hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bvx_A Alpha-mannosidase 2; fa 1.0 1 1 1522.1 90.3 906 25-1008 70-1045(1045)
2 2wyh_A Alpha-mannosidase; hydr 1.0 1 1 1155.9 75.6 820 25-1007 15-923 (923)
3 3lvt_A Glycosyl hydrolase, fam 1.0 1 1 1062.3 75.4 814 33-1005 4-898 (899)
4 1o7d_A Lysosomal alpha-mannosi 1.0 1 1 622.3 32.3 294 23-318 1-297 (298)
5 1o7d_D Lysosomal alpha-mannosi 1.0 1 1 511.0 29.3 272 596-873 2-274 (282)
6 1o7d_C Lysosomal alpha-mannosi 1.0 1 1 234.1 17.2 151 395-577 2-152 (159)
7 1o7d_E Lysosomal alpha-mannosi 1.0 1 1 200.5 11.0 119 882-1009 3-123 (126)
8 1k1x_A 4-alpha-glucanotransfer 1.0 1 1 179.7 27.9 250 34-332 2-260 (659)
9 1o7d_B Lysosomal alpha-mannosi 1.0 1 1 159.2 6.8 74 316-389 2-75 (84)
10 3n98_A Alpha-amylase, GH57 fam 1.0 1 1 89.8 16.0 299 101-426 116-487 (562)
No 1
>3bvx_A Alpha-mannosidase 2; family 38 glycoysl hydrolase, glycosidase, golgi apparatus, membrane, signal-anchor, transmembrane; HET: WZ5; 1.10A {Drosophila melanogaster} SCOP: a.8.3.1 b.30.5.6 c.6.2.1 PDB: 3bud_A 3buq_A* 3bvt_A* 3bui_A* 3bvv_A* 3bvw_A* 3bvu_A* 3cv5_A* 3czn_A* 3czs_A* 2ow6_A* 1r33_A* 1r34_A* 1tqs_A* 1tqt_A* 1tqu_A* 1tqv_A* 1tqw_A* 2alw_A* 2f18_A* ...
Probab=1.00 E-value=1 Score=1522.11 Aligned_cols=906 Identities=26% Similarity=0.436 Sum_probs=764.7
Q ss_pred ECCCCCCCCCCEEEEEEECCCCCCCCCCCHHEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHCC
Q ss_conf 33799999981399998163578853200210242467640136699999979999880999739991125789998417
Q 001813 25 YNTSAGIVPGKINVHLVPHSHDDVGWLKTVDQYYVGSNNSIQVACVQNVLDSLIPALVADKNRKFIYVEQAFFQRWWRDQ 104 (1010)
Q Consensus 25 ~~~~~~~~~~~~~vhlvpHSH~D~gWl~t~~ey~~~~~~~i~~~~v~~il~~vi~~L~~~p~~kF~~~e~~~~~~w~~~~ 104 (1010)
|+.+.+....+++||+|||||||+|||||++|||. ..++++|++|+++|+++|++||+|+|+++|++||+++
T Consensus 70 ~~~~~~~~~~~~~V~lV~HsH~D~gWl~t~~e~~~--------~~~~~~~~~vl~~L~~~p~~~F~~~e~~~l~~w~~e~ 141 (1045)
T 3bvx_A 70 YDPLKYNAHHKLKVFVVPHSHNDPGWIQTFEEYYQ--------HDTKHILSNALRHLHDNPEMKFIWAEISYFARFYHDL 141 (1045)
T ss_dssp CCGGGSBTTBCEEEEEEEEEECCSSSSSCHHHHHH--------HTHHHHHHHHHHHHHHCTTCCEEECCHHHHHHHHHHS
T ss_pred HHCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHH--------HHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHC
T ss_conf 52214477786389999357888653444877615--------9999999999999977999679995489999999977
Q ss_pred CHHHHHHHHHHHHCCCEEEECCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHCC
Q ss_conf 97999999999987987998313411024899968899999999999998729997301561889886566899986349
Q 001813 105 SEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVG 184 (1010)
Q Consensus 105 ~p~~~~~vk~LV~~GrlE~vgggwv~~Dea~~~~esiIrql~~G~~~l~~~fG~~p~v~w~~D~FGhs~~~p~ll~~~~G 184 (1010)
+|+.+++||+||++|||||+||||||+|||++||||+||||++||+|++++||+.|++||+|||||||+++|||| +++|
T Consensus 142 ~Pe~~~~vk~lV~~Grle~~gG~Wv~~De~~~~~EslirQl~~G~~~~~~~FG~~~~~~W~pD~FG~s~~lPqil-~~~G 220 (1045)
T 3bvx_A 142 GENKKLQMKSIVKNGQLEFVTGGWVMPDEANSHWRNVLLQLTEGQTWLKQFMNVTPTASWAIAPFGHSPTMPYIL-QKSG 220 (1045)
T ss_dssp CHHHHHHHHHHHHTTSEEESSCCSSCBCSSSCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCSSSBCTHHHHHH-HTTT
T ss_pred CHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHH-HHCC
T ss_conf 999999999997589999988701141156799899999999999999998299972587279998658999999-9759
Q ss_pred CCEEEEEECCHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEECCC-CCCC-----CCC----CCCCCCCC----CCCCC
Q ss_conf 9389995038776997420594059995179999987225752889-9799-----998----97633488----99973
Q 001813 185 FDFLFFARIDYQDRAKRINEKTLEVVWRASKSLGSSAQIMTGISPK-NYEP-----PSD----NFYFEVGD----TSPIV 250 (1010)
Q Consensus 185 ~~~~~~~Ri~~~~~~~~~~~~~~eF~W~~~d~~~~gs~i~t~~~~~-~Y~~-----p~~----~f~f~~~~----~~~~~ 250 (1010)
|++++++|++|++++.|+..+.+||+|+|+++..+|++||||++|. +|+. |++ +|+|+.+. .|++.
T Consensus 221 i~~~~~~R~~~~~~~~~~~~k~~eF~W~~~w~~~dGs~Ilt~~~p~~~Y~~~~~~gp~~~~c~~fdf~~l~~~~~~~~~~ 300 (1045)
T 3bvx_A 221 FKNMLIQRTHYSVKKELAQQRQLEFLWRQIWDNKGDTALFTHMMPFYSYDIPHTCGPDPKVCCQFDFKRMGSFGLSCPWK 300 (1045)
T ss_dssp CCEEEECCCCHHHHHHHHHTTCSEEEECCTTCSSCTTCEEEEECCSSCSSGGGTSSSCHHHHGGGCGGGSSTTSCCCTTS
T ss_pred CCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 97599941442000001236784599837777999994899861566657665568885533121202245654457556
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHH---HHHHHHHHHHHHCCC--CEEEEECCHH
Q ss_conf 37966668996789999999999972003998089960579877314788---999999999985089--7369976913
Q 001813 251 QDDMNLFDYNVPERVNDFVSAAIAQANITRTNHIMWTMGTDFKYQYAHTW---FRQMDKFIHYVNQDG--RVNALYSTPS 325 (1010)
Q Consensus 251 ~~~~~~~~~nv~~~~~~~~~~~~~~~~~~~t~~il~~~G~Df~y~~a~~~---f~~~~~li~~~N~~~--~~~i~~sT~~ 325 (1010)
.++..+.++|++++++.+++++++++.+|+++++|+|+|+||+|.+|.+| |+||+++|+++|+.+ .++++|||++
T Consensus 301 ~~p~~~~~~nv~~r~~~~~~~~~~~~~~~~t~~~l~~~G~d~~~~~~~~~~~~~~n~~~li~~in~~~~~~~~v~~sT~~ 380 (1045)
T 3bvx_A 301 VPPRTISDQNVAARSDLLVDQWKKKAELYRTNVLLIPLGDDFRFKQNTEWDVQRVNYERLFEHINSQAHFNVQAQFGTLQ 380 (1045)
T ss_dssp CCCCCCCTTTHHHHHHHHHHHHHHHHTTSSSSEEEEEEEEETCSCSHHHHHHHHHHHHHHHHHHHHCGGGCEEEEECCHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHH
T ss_conf 77655627999999999999999861035788699995479888652256788888999999986088877069987999
Q ss_pred HHHHHHHHCC----CCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCC---CCCCCCHHH
Q ss_conf 2499988439----999875578743554588731254203200357999754999999886651023---467973589
Q 001813 326 MYIDAKYAAN----ESWPLKTDDFFPYADRENAYWTGYFTSRPALKGYVRTMSAYYLAARQLEFFKGR---NEVGLSTDS 398 (1010)
Q Consensus 326 ~Yf~a~~~~~----~~~p~~~gDf~py~~~~~~yWtG~~TSR~~~K~~~R~~e~~L~~ae~l~~l~~~---~~~~~~~~~ 398 (1010)
+||+++++.. ..||+++||||||++++++||+|||||||++|+++|++|++|++||+|++++.. .++...+++
T Consensus 381 ~yf~~l~~~~~~~~~~lp~~~Ge~~~~~~~~~~yw~G~yTSr~~~K~~nR~~e~~L~~aE~l~ala~~~~~~~~~~~L~~ 460 (1045)
T 3bvx_A 381 EYFDAVHQAERAGQAEFPTLSGDFFTYADRSDNYWSGYYTSRPYHKRMDRVLMHYVRAAEMLSAWHSWDGMARIEERLEQ 460 (1045)
T ss_dssp HHHHHHHHHHHTTSCCCCEEESCBCSCEEETTEECCGGGTSSHHHHHHHHHHHHHHHHHHHHHHTSCCCGGGCHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
T ss_conf 99999986521444668614774366566776300632605689999999999999999999999876178760899999
Q ss_pred HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC---CCCCCCCCCCCCCCCCC
Q ss_conf 999998550245656765311288999999999999999999999987224579888997---67533466554468998
Q 001813 399 LADALALVQHHDAVSGTEKQHVADDYAKRLSIGYTEAEKVVAASLACLTEFSKNGCVNPI---TNFQQCPLLNISYCPPS 475 (1010)
Q Consensus 399 lw~~l~~~QhHDaItGTs~~~V~~dy~~rl~~a~~~~~~~~~~~l~~L~~~~~~~~~~~~---~~~~~~~~ln~s~c~~~ 475 (1010)
+|++|+++||||+||||++++|++||.+||..+...++.+++.+++.|+.....++..+. .+++.|.+++.+.|+..
T Consensus 461 ~wk~lll~QhHD~i~Gts~~~V~~d~~~rl~~a~~~~~~l~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (1045)
T 3bvx_A 461 ARRELSLFQHHDGITGTAKTHVVVDYEQRMQEALKACQMVMQQSVYRLLTKPSIYSPDFSFSYFTLDDSRWPGSGVEDSR 540 (1045)
T ss_dssp HHHHHHHHTBTTTTTSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTBCTTTCCCCTTSCSEEEECSSSSCTTTCCCC
T ss_pred HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC
T ss_conf 99997550256677775807999999999999999999999999999863434334443221111012101232346654
Q ss_pred CC-CCCCCC---CEEEEEECCCCCEEEEEEEEEEECCEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 54-468997---14999994999247689999970872999959997888898406311111223332222488878888
Q 001813 476 EV-DLSSGK---SLVVVVYNPLGWKREDIIRIPVINENVTVKDSKGKVIESQLLPLLKDSMSLRNSYSTAYLGKSTNVTP 551 (1010)
Q Consensus 476 ~~-~~~~~~---~~~v~vfNpl~~~r~~~V~i~v~~~~~~v~d~~G~~v~~Qi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (1010)
.. .++ ++ ...++|||||+|+|+++|+++|..+.+.|.|.+|++||+|+++.+.....+....+ .......
T Consensus 541 ~~i~~~-~~~~~~~~vvvfN~L~~~r~~~V~v~v~~~~~~V~D~~G~~v~~Qi~~~~~~~~~~~~~~~-----~~~~~~~ 614 (1045)
T 3bvx_A 541 TTIILG-EDILPSKHVVMHNTLPHWREQLVDFYVSSPFVSVTDLANNPVEAQVSPVWSWHHDTLTKTI-----HPQGSTT 614 (1045)
T ss_dssp CEECCB-TTTBSEEEEEEEECSSSCEEEEEEEEESCSCEEEEETTCCEECEEEEEEEEEEEETTTTEE-----EEEEEEE
T ss_pred CCCCCC-CCCCCCCEEEEECCCCCCEEEEEEEEECCCCEEEECCCCCEEEEEEEECCCCCCCCCCCCC-----CCCCCCC
T ss_conf 432346-6656774699994998502269999951686699828989875899632344443111124-----4557787
Q ss_pred CEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCEEE----------EC-CCCCCCCEEECCCEE------EEEEECCCCE
Q ss_conf 489999973199823799998177556766532022----------20-346898139737749------9999688770
Q 001813 552 SYWLAFSASVPPLGFNTYIISSAKQAASHSGMRTVY----------KS-QIRQNDTIEVGPGNL------KLLYSGKRAK 614 (1010)
Q Consensus 552 ~~~l~f~a~iPplG~~~y~i~~~~~~~~~~~~~~~~----------~~-~~~~~~~~~ieN~~~------ki~~~~~~G~ 614 (1010)
.|+|+|.++||||||++|.|............+++. .. .....+...|||+++ +|.|++ +|.
T Consensus 615 ~~~L~f~a~vP~lG~~ty~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~leN~~~~~~~~~~v~fd~-~G~ 693 (1045)
T 3bvx_A 615 KYRIIFKARVPPMGLATYVLTISDSKPEHTSYASNLLLRKNPTSLPLGQYPEDVKFGDPREISLRVGNGPTLAFSE-QGL 693 (1045)
T ss_dssp EEEEEEEEEECTTEEEEEEEEECSSCCTTEEECEEEEECSSCCCCCCTTCSSCCEEECCCCEEEECTTSCEEEECT-TSC
T ss_pred CEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEECC-CCC
T ss_conf 2799998013885369999983687655444322000135664221234566777425504522156653799878-886
Q ss_pred EEEEEECCCCCEEEEEEEEEEEECCCCCCCCCCCCCEEEECCCCC-CCCCCCCCEEEEEECCCEEEEEEEECCEEEEEEE
Q ss_conf 899995578739999999999424899999999765067079997-6479997559999578167999997680999999
Q 001813 615 LMRYINSKTSVNKLLEQSYIYYRGDDGSKDLQPSGAYIFRPNGTY-PIEPEGQLSFTILRGPLLDEVHQRINPWIYQVTR 693 (1010)
Q Consensus 615 l~si~dk~~g~~~~~~~~~~~Y~~~~g~~~~~~sgaY~F~P~~~~-~~~~~~~~~i~v~~Gpl~~ev~~~~~~~i~~~ir 693 (1010)
|+||+||.+|+++.+.++|.+|.+..| ++.||||+|+|++.. ++... ...+.+++||++++|++.+ .+++|++|
T Consensus 694 L~si~dk~~g~e~~~~~~f~~Y~~~~~---~~~sgaY~F~P~~~~~~~~~~-~~~~~v~~Gpl~~ev~~~~-~~i~q~ir 768 (1045)
T 3bvx_A 694 LKSIQLTQDSPHVPVHFKFLKYGVRSH---GDRSGAYLFLPNGPASPVELG-QPVVLVTKGKLESSVSVGL-PSVVHQTI 768 (1045)
T ss_dssp EEEEECSTTSCCEEEEEEEEEECBCSS---SCCCCSSCCCBSSSCEECCCC-SCCEEEEECSSCEEEEEEE-TTEEEEEE
T ss_pred EEEEEECCCCEEEEEEEEEEEEECCCC---CCCCCCEEECCCCCCCCCCCC-CCEEEEEECCEEEEEEEEE-EEEEEEEE
T ss_conf 799997479818877667888725668---998861376579887653468-8459999688689999997-25999999
Q ss_pred EECCCCCEEEEEEECCCCCCCCCCCEEEEEEEEECCCCCEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCEEECCCEE
Q ss_conf 97189942799997751135999828999999613579679982886310001333346754455666663167415134
Q 001813 694 VYKGKDHAEIEFTVGPIPIDDGIGKEVVTQITSNMISNKTFYTDSSGRDFIERIRDYRKDWNLEVNQPIAGNYYPVNLGI 773 (1010)
Q Consensus 694 L~~~~~~ie~e~~v~~i~~~~~~~~ev~~~f~T~i~s~~~fyTDsnG~~~i~R~~~~r~~w~~~~~~pv~~NyYPv~s~i 773 (1010)
| +.++||++++|+ |.+..|||++++|+|+|+|++.||||+|||++++|+++. ++|+++|||||+++|
T Consensus 769 L--~~~~ieie~~Vd---~~~~~~~el~~rf~t~i~s~~~fyTD~nG~~~ikR~~~~--------~~p~~~NyYPv~s~~ 835 (1045)
T 3bvx_A 769 M--RGGAPEIRNLVD---IGSLDNTEIVMRLETHIDSGDIFYTDLNGLQFIKRRRLD--------KLPLQANYYPIPSGM 835 (1045)
T ss_dssp E--SSSSCEEEEEEC---CTTCTTEEEEEEEEECCCCTTEEEEEETTTEEEEEECCT--------TSCGGGGCEEESSEE
T ss_pred E--CCEEEEEEEEEE---CCCCCCEEEEEEEECCCCCCCEEEEECCCCEEEECCCCC--------CCCCCCCEEEEEEEE
T ss_conf 8--991289999993---578887489999445657887389926886368757788--------887314168741368
Q ss_pred EEEECCCCEEEEEECCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCHHH--
Q ss_conf 578367314898504554213679748999996422568648333434440023456671786489998457640223--
Q 001813 774 YMKDNSSELSILVDRSVGGSSIADGQLELMLHRRLVADDNRGVSEALNETVCVFDKCEGLTIIGKYYLRIDPVGEAAK-- 851 (1010)
Q Consensus 774 ~I~D~~~~ltvltdr~~G~ssl~~G~iElml~Rrl~~DD~rGv~e~l~e~~~~~~~~~gl~v~~~~~l~l~~~~~~~~-- 851 (1010)
+|+|++.||||++||+|||||+++|+||||||||+++||+|||||+|+|+ ++++|+|||+|++...++.
T Consensus 836 ~i~D~~~~ltvl~drs~G~sSl~~G~lElmlhRrl~~DD~rGvge~l~d~---------~~~~~~~~l~l~~~~~~~~~~ 906 (1045)
T 3bvx_A 836 FIEDANTRLTLLTGQPLGGSSLASGELEIMQDRRLASDDERGLGQGVLDN---------KPVLHIYRLVLEKVNNCVRPS 906 (1045)
T ss_dssp EEECSSEEEEEEESSCEEEECCSTTEEEEEEEEEBCSCCSSSCCSCBCCC---------CCEEEEEEEEEEECTTSCCCC
T ss_pred EEECCCEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCC---------CEEEEEEEEEEECCCCCCCCC
T ss_conf 99759826999956776666567975899996641257765546666677---------400048999982565445445
Q ss_pred ----------HCCCCHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC-----EEEEEEC
Q ss_conf ----------2021101220573331003688744455446456676566799851488966518993-----7998740
Q 001813 852 ----------WRRSFGQEIYSPFLLAFTEQDGDHWANSHLATYSAMDTTYVLPDNVALITLQELDSGK-----ILLRLAH 916 (1010)
Q Consensus 852 ----------~~r~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~l~~~~~lP~~vhlltl~~~~~~~-----illRl~~ 916 (1010)
..|..++++++||+++++.... ......+|+++.. +|||||||+|||++++++ +|||| |
T Consensus 907 ~~~~~~~~s~~~~~~~~~l~~p~~~~~~~~~~---~~~~~~~~~~l~~--~lP~~vhlltL~~~~~~~~~~~~~ll~L-~ 980 (1045)
T 3bvx_A 907 KLHPAGYLTSAAHKASQSLLDPLDKFIFAENE---WIGAQGQFGGDHP--SAREDLDVSVMRRLTKSSAKTQRVGYVL-H 980 (1045)
T ss_dssp TTCSEECCCHHHHHHHHHHHSCCEEEEECSSC---CTTBCSEECTTSC--CCCTTEEEEEEEECSCTTCSEEEEEEEE-E
T ss_pred CCCCCCCCCHHHHHHHHHHHCCCCEEECCCCC---CCCCCCCCCCCCC--CCCCCEEEEEEEECCCCCCCCCEEEEEE-E
T ss_conf 45654445788999998873974533525766---4323456785444--6998779997576588986674189998-6
Q ss_pred C--CCCCCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEE
Q ss_conf 1--12346689950023541311776753538842323550255731021224542998878864578888999743995
Q 001813 917 L--YEIEEDTDLSVMSSVELKKVFPKKKISKVTEMNLSANQERAVMEKKRLVWRVEGSSKEQPTAVRGSPVDPAKLVVEL 994 (1010)
Q Consensus 917 l--~~~~~~~~~s~~~~v~l~~lf~~~~v~~i~EtsLtg~~~~~~~~~~r~~w~~~~~~~~~~~~~~~~~~~~~~~~v~l 994 (1010)
. |+++++.. +.+++|+|.++|.. +.+++||||+|++.++++. +.+.|+|
T Consensus 981 ~~~~~~~~~~~-s~~~~~~l~~lf~~--i~~~~etsL~~~~~~~~~~--------------------------~~~~v~l 1031 (1045)
T 3bvx_A 981 RTNLMQCGTPE-EHTQKLDVCHLLPN--VARCERTTLTFLQNLEHLD--------------------------GMVAPEV 1031 (1045)
T ss_dssp ECCCCCCSCCC-CCCCCCCGGGSSSS--EEEEEEECTTSCSEEEECG--------------------------GGCCCCC
T ss_pred EECCCCCCCCC-CCCCCCCHHHHHCC--CCEEEEECCCCCCCCCCCC--------------------------CCCCEEE
T ss_conf 40221476755-67662239997347--3539994443776564447--------------------------8761687
Q ss_pred CCCCEEEEEEEEEE
Q ss_conf 48605789999952
Q 001813 995 APMEIRTFVIEFYS 1008 (1010)
Q Consensus 995 ~P~eIrTf~i~~~~ 1008 (1010)
+|||||||+|++++
T Consensus 1032 ~PmeirTf~i~~~~ 1045 (1045)
T 3bvx_A 1032 CPMETAAYVSSHSS 1045 (1045)
T ss_dssp CTTCEEEEEEEEEC
T ss_pred CCCEEEEEEEEEEC
T ss_conf 17644899999609
No 2
>2wyh_A Alpha-mannosidase; hydrolase, glycosidase, glycoside hydrolase; 1.90A {Streptococcus pyogenes} PDB: 2wyi_A*
Probab=1.00 E-value=1 Score=1155.93 Aligned_cols=820 Identities=15% Similarity=0.169 Sum_probs=651.4
Q ss_pred ECCCCCCCCCCEEEEEEECCCCCCCCCCCHHEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCE-EEEECHHHHHHHHHC
Q ss_conf 3379999998139999816357885320021024246764013669999997999988099973-999112578999841
Q 001813 25 YNTSAGIVPGKINVHLVPHSHDDVGWLKTVDQYYVGSNNSIQVACVQNVLDSLIPALVADKNRK-FIYVEQAFFQRWWRD 103 (1010)
Q Consensus 25 ~~~~~~~~~~~~~vhlvpHSH~D~gWl~t~~ey~~~~~~~i~~~~v~~il~~vi~~L~~~p~~k-F~~~e~~~~~~w~~~ 103 (1010)
|++|+...+++++||+|||||||+||+||+++|+ .++.++|++|+++|+++|+++ |+|+|++++.+||.+
T Consensus 15 ~~~~~~~~~~~~~v~~v~HsH~D~~Wl~t~~~~~---------~~~~~~~~~vl~~l~~~p~~~~F~~~~q~~~~~~~~~ 85 (923)
T 2wyh_A 15 EVLFQGPAMATKKVHIISHSHWDREWYMAYEQHH---------MRLINLIDDLLEVFQTDPDFHSFHLDGQTIILDDYLK 85 (923)
T ss_dssp HHHSCCCCCCCEEEEEEEBCBCCSSSSSCHHHHH---------HHHHHHHHHHHHHHHHCTTCCCEECTTBTHHHHHHHH
T ss_pred HHCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHH---------HHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHH
T ss_conf 3215788887528999733788930050999999---------9999999999999975988746999277999999987
Q ss_pred CCHHHHHHHHHHHHCCCEEEECCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHC
Q ss_conf 79799999999998798799831341102489996889999999999999872999730156188988656689998634
Q 001813 104 QSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEV 183 (1010)
Q Consensus 104 ~~p~~~~~vk~LV~~GrlE~vgggwv~~Dea~~~~esiIrql~~G~~~l~~~fG~~p~v~w~~D~FGhs~~~p~ll~~~~ 183 (1010)
++|+.+++||+||++||||+ ||||||+||+++||||+||||++||+|+++ ||+.|++||+|||||||++||||| +++
T Consensus 86 ~~p~~~~~vk~lV~~Grlei-G~wYv~~D~~~~~~es~irq~~~G~~~~~~-fG~~~~~~w~pD~FG~s~~lPqil-~~~ 162 (923)
T 2wyh_A 86 VRPEREPEIRQAIASGKLRI-GPFYILQDDFLTSSESNVRNMLIGKEDCDR-WGASVPLGYFPDTFGNMGQTPQLM-LKA 162 (923)
T ss_dssp HCGGGHHHHHHHHHTTSEEC-CSBSSCBCSTTSCHHHHHHHHHHHHHHHHH-HTCCCSSEEESSCSSBCTTHHHHH-HTT
T ss_pred HCHHHHHHHHHHHHCCCEEE-EEEEECCCCCCCCHHHHHHHHHHHHHHHHH-CCCCCCEEEECCCCCCCHHHHHHH-HHC
T ss_conf 79999999999998599898-411441454669989999999999999998-199976248148998626899999-976
Q ss_pred CCCEEEEEECC----HHHH---HHHHCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99389995038----7769---9742059405999517999998722575288997999989763348899973379666
Q 001813 184 GFDFLFFARID----YQDR---AKRINEKTLEVVWRASKSLGSSAQIMTGISPKNYEPPSDNFYFEVGDTSPIVQDDMNL 256 (1010)
Q Consensus 184 G~~~~~~~Ri~----~~~~---~~~~~~~~~eF~W~~~d~~~~gs~i~t~~~~~~Y~~p~~~f~f~~~~~~~~~~~~~~~ 256 (1010)
||++++++|++ |+++ ..+...+.++|+|+|+| |++||||++|.+|+.+ ..+ | .
T Consensus 163 Gi~~~~~~R~~~~~~~n~~~~~~~~~~~~~~eF~W~g~d----Gs~Ilt~~~p~~Y~~g-~~~---------~------~ 222 (923)
T 2wyh_A 163 GLQAAAFGRGIRPTGFNNQVDTSEKYSSQFSEISWQGPD----NSRILGLLFANWYSNG-NEI---------P------T 222 (923)
T ss_dssp TCCEEEECSSCEECCSSSCCCTTCTTEESSSEEEEECTT----CCEEEEEECTTCTTTT-CSC---------C------S
T ss_pred CCCEEEEEECCCCCCCCCCCCCHHHCCCCCCEEEEECCC----CCEEEEEECCCCCCCC-CCC---------C------C
T ss_conf 997899970235322332222112115888559998899----9828999777776689-879---------9------8
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHHC-
Q ss_conf 689967899999999999720039980899605798773147889999999999850-897369976913249998843-
Q 001813 257 FDYNVPERVNDFVSAAIAQANITRTNHIMWTMGTDFKYQYAHTWFRQMDKFIHYVNQ-DGRVNALYSTPSMYIDAKYAA- 334 (1010)
Q Consensus 257 ~~~nv~~~~~~~~~~~~~~~~~~~t~~il~~~G~Df~y~~a~~~f~~~~~li~~~N~-~~~~~i~~sT~~~Yf~a~~~~- 334 (1010)
...|++.+++.+++.++ +.++++++|+|+|+||+|.. ++|+++|+++|+ .+.++++|||+++||+++++.
T Consensus 223 ~~~~v~~~~~~~~~~~~---~~~~t~~~l~~~G~D~~~~~-----~~~~~~i~~~n~~~~~~~~~~sT~~~yf~~l~~~~ 294 (923)
T 2wyh_A 223 TEAEARLFWDKKLADAE---RFASTKHLLMMNGCDHQPVQ-----LDVTKAIALANQLYPDYEFVHSCFEDYLADLADDL 294 (923)
T ss_dssp SHHHHHHHHHHHHHHHH---HHCSSSEEEEEECCBTCCCC-----TTHHHHHHHHHHHCTTEEEEECCHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHHHH---HCCCCCEEEEEEECCCCCCC-----HHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHC
T ss_conf 98999999999999998---54888709999603989863-----42999999998548985599879999999987652
Q ss_pred CCCCCCCCCCCC-CCCCCCCCCE-E--EEECCCCHHHHHHHHHHHHH-HHHHHHHHHC---CCCCCCCCHHHHHHHHHHH
Q ss_conf 999987557874-3554588731-2--54203200357999754999-9998866510---2346797358999999855
Q 001813 335 NESWPLKTDDFF-PYADRENAYW-T--GYFTSRPALKGYVRTMSAYY-LAARQLEFFK---GRNEVGLSTDSLADALALV 406 (1010)
Q Consensus 335 ~~~~p~~~gDf~-py~~~~~~yW-t--G~~TSR~~~K~~~R~~e~~L-~~ae~l~~l~---~~~~~~~~~~~lw~~l~~~ 406 (1010)
...||+++|||+ ||+++ | | |||||||++|+++|++|++| +.||+|++++ +..++...++++||+|+++
T Consensus 295 ~~~lp~~~GEl~~~~~~~----W~th~G~~tSr~~~K~~nR~~E~~L~~~aE~l~~la~~~g~~yp~~~L~~~Wk~ll~~ 370 (923)
T 2wyh_A 295 PENLSTVQGEITSQETDG----WYTLANTASARIYLKQANTRVSRQLENITEPLAAMAYEVTSTYPHDQLRYAWKTLMQN 370 (923)
T ss_dssp CSCCCEEESCBSCTTSCS----SSSCGGGGGTTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHSCCCHHHHHHHHHHHHTT
T ss_pred CCCCCEECCCCCCCCCCC----CEECCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
T ss_conf 256854303445755566----2114888526899999999999999999999999999728888668999999997562
Q ss_pred HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 02456567653112889999999999999999999999872245798889976753346655446899854468997149
Q 001813 407 QHHDAVSGTEKQHVADDYAKRLSIGYTEAEKVVAASLACLTEFSKNGCVNPITNFQQCPLLNISYCPPSEVDLSSGKSLV 486 (1010)
Q Consensus 407 QhHDaItGTs~~~V~~dy~~rl~~a~~~~~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~ln~s~c~~~~~~~~~~~~~~ 486 (1010)
||||+||||++++|++||..||.++.+.++.+++.+++.|+..... + . ..++...
T Consensus 371 Q~HD~i~Gts~~~V~~d~~~~~~~~~~~~~~l~~~al~~l~~~~~~-----------------~----~----~~~~~~~ 425 (923)
T 2wyh_A 371 HPHDSICGCSVDSVHREMMTRFEKAYEVGHYLAKEAAKQIADAIDT-----------------R----D----FPMDSQP 425 (923)
T ss_dssp CBHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTBCC-----------------T----T----SCTTSEE
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-----------------C----C----CCCCCEE
T ss_conf 7876757758779999999999999999999999999999744566-----------------6----6----7888408
Q ss_pred EEEECCCCCEEEEEEEEEEE-------------------------CCEEEEECCCCCEEE-EEEEECCCCCCCCCCCCCC
Q ss_conf 99994999247689999970-------------------------872999959997888-8984063111112233322
Q 001813 487 VVVYNPLGWKREDIIRIPVI-------------------------NENVTVKDSKGKVIE-SQLLPLLKDSMSLRNSYST 540 (1010)
Q Consensus 487 v~vfNpl~~~r~~~V~i~v~-------------------------~~~~~v~d~~G~~v~-~Qi~~~~~~~~~~~~~~~~ 540 (1010)
++|||||+|+|+++|++++. .+.+.|.|.+|++|| +|+++... .... .+.
T Consensus 426 vvvfN~l~~~r~~vV~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~d~~G~~v~~~qi~~~~~-~~~~---~~~ 501 (923)
T 2wyh_A 426 FVLFNTSGHSKTSVAELSLTWKKYHFGQRFPKEVYQEAQEYLARLSQSFQIIDTSGQVRPEAEILGTSI-AFDY---DLP 501 (923)
T ss_dssp EEEEECSSSCEEEEEEEEEEEEEEECTTSCHHHHHHHHHHHHHTCCSEEEEECTTCCBCTTCEEEEEEE-EEEE---ECC
T ss_pred EEEECCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEECCCCCEECCEEEEECCC-CCCC---CCC
T ss_conf 999949996475899999972533322234321100001121036787799979989955199985123-4442---255
Q ss_pred CCCCC-CCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCEEEECCCC-CCCCEEECCCEEEEEEECCCCEEEEE
Q ss_conf 22488-87888848999997319982379999817755676653202220346-89813973774999996887708999
Q 001813 541 AYLGK-STNVTPSYWLAFSASVPPLGFNTYIISSAKQAASHSGMRTVYKSQIR-QNDTIEVGPGNLKLLYSGKRAKLMRY 618 (1010)
Q Consensus 541 ~~~~~-~~~~~~~~~l~f~a~iPplG~~~y~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~ieN~~~ki~~~~~~G~l~si 618 (1010)
..+. .+.....++|.|.++||||||++|.|.......... .. .. ..+..+|||++++|.|+ .+|.+ +|
T Consensus 502 -~~~~~~~~~~~~~~l~f~a~vP~lG~~~~~i~~~~~~~~~~----~~---~~~~~~~~~leN~~~~v~~d-~~G~l-si 571 (923)
T 2wyh_A 502 -KRSFREPYFAIKVRLRLPITLPAMSWKTLALKLGNETTPSE----TV---SLYDDSNQCLENGFLKVMIQ-TDGRL-TI 571 (923)
T ss_dssp -SSSCCEEEEEEEEEEEEEEEECTTEEEEEEEEEEC----------CC---CSEETTTTEEECSSEEEEEC-TTSCE-EE
T ss_pred -CCCCCCCCCEEEEEEEEEEECCCCCEEEEEEEECCCCCCCC----CC---CCCCCCCCEEECCEEEEEEE-CCCCE-EE
T ss_conf -55665653103699999997387500899999888766665----31---01367872575680899990-89878-99
Q ss_pred EECCCCCEEEEEEEEEEEECCCCCCCCCCCCCEEEECCCCC-CCC-CCCCCEEEEE-ECCCEEEEEEEE-----------
Q ss_conf 95578739999999999424899999999765067079997-647-9997559999-578167999997-----------
Q 001813 619 INSKTSVNKLLEQSYIYYRGDDGSKDLQPSGAYIFRPNGTY-PIE-PEGQLSFTIL-RGPLLDEVHQRI----------- 684 (1010)
Q Consensus 619 ~dk~~g~~~~~~~~~~~Y~~~~g~~~~~~sgaY~F~P~~~~-~~~-~~~~~~i~v~-~Gpl~~ev~~~~----------- 684 (1010)
+||.+|+++. +|..|.+. ++.||||+|+|++.. ++. ......+++. +||++++|++.+
T Consensus 572 ~dk~~gr~~~---~~~~y~d~-----~d~~day~f~p~~~~~~~~~~~~~~~i~v~~~gpl~~~v~~~~~~~vP~~~~~~ 643 (923)
T 2wyh_A 572 TDKQSGLIYQ---DLLRFEDC-----GDIGNEYISRQPNHDQPFYADQGTIKLNIISNTAQVAELEIQQTFAIPISADKL 643 (923)
T ss_dssp EETTTCCEEE---EESEEEEE-----ECCSCSSCCCCCTTCCCEEGGGSEEEEEEEEECSSEEEEEEEEEEEEESSBCTH
T ss_pred EECCCCEEEE---EEEEEEEC-----CCCCCEEEEECCCCCCEEECCCCCCEEEEEECCCCEEEEEEEEEECCCCCCHHH
T ss_conf 9978993988---88999605-----998870688768887303316787469999868877999999986377430122
Q ss_pred ------------------CC-----EEEEEEEEECCCCCEEEEEEECCCCCCCCCCCEEEEEEEEECCCCCEEEECCCCC
Q ss_conf ------------------68-----0999999971899427999977511359998289999996135796799828863
Q 001813 685 ------------------NP-----WIYQVTRVYKGKDHAEIEFTVGPIPIDDGIGKEVVTQITSNMISNKTFYTDSSGR 741 (1010)
Q Consensus 685 ------------------~~-----~i~~~irL~~~~~~ie~e~~v~~i~~~~~~~~ev~~~f~T~i~s~~~fyTDsnG~ 741 (1010)
++ +++|+++||+++++|||++.|++.+ .+|+++++|+|+|.++..+| | |||
T Consensus 644 L~~~~~~~~~~~~r~~~~s~~~~~~~i~q~i~L~~~~~~ie~~~~vd~~~----~~~~l~v~fpt~i~s~~~~~-d-~~f 717 (923)
T 2wyh_A 644 LQAEMEAVIDITERQARRSQEKAELTLTTLIRMEKNNPRLQFTTRFDNQM----TNHRLRVLFPTHLKTDHHLA-D-SIF 717 (923)
T ss_dssp HHHHHHTTCCGGGCCCCBCSCEEEEEEEEEEEEETTCSCEEEEEEEEECC----CSEEEEEEEECCCCCSEEEE-E-ETT
T ss_pred HCCCCCCCCCHHHHHHCCCCCCCCEEEEEEEEEECCCCEEEEEEEECCCC----CCEEEEEEECCCCCCCCEEE-E-CCC
T ss_conf 10111122201334423466666458999999928996589999988733----89899999015537897799-4-586
Q ss_pred CCEECCCCCCC-CCCCCCCCCCCCCEEECCCEEEEEECCCCEEEEEECCCCCCCC-CCCEEEEEEEEEE--CCCCCCCCC
Q ss_conf 10001333346-7544556666631674151345783673148985045542136-7974899999642--256864833
Q 001813 742 DFIERIRDYRK-DWNLEVNQPIAGNYYPVNLGIYMKDNSSELSILVDRSVGGSSI-ADGQLELMLHRRL--VADDNRGVS 817 (1010)
Q Consensus 742 ~~i~R~~~~r~-~w~~~~~~pv~~NyYPv~s~i~I~D~~~~ltvltdr~~G~ssl-~~G~iElml~Rrl--~~DD~rGv~ 817 (1010)
|+++|+++.+. +|+. ++||||+++|++|+|++.|+||+||+++|++++ .+|+|+|||||++ +.| +|+
T Consensus 718 g~i~R~~~~~~~~w~~------a~~~~p~~~~v~l~d~~~gvavlnd~~~g~~~~~~~~~i~LtLlRs~~~lg~--~G~- 788 (923)
T 2wyh_A 718 ETVKRPNHPDATFWKN------PSNPQHQECFVSLFDGENGVTIGNYGLNEYEILPDTNTIAITLLRSVGEMGD--WGY- 788 (923)
T ss_dssp EEEEEESSCCTTTCCC------SCCCEECSSEEEEECSSEEEEEEESSCCEEEEETTTTEEEEEEEEECSBCCT--TSC-
T ss_pred EEEECCCCCCCCCCCC------CCCEEEEEEEEEEECCCCCEEEEECCCCCEEEECCCCEEEEEEECCCCCCCC--CCC-
T ss_conf 3898268787777656------6641742239999879876899858965368866898499998136532366--776-
Q ss_pred CCCCCCCCCCCCCCCEEEEEEEEEEECCCCCHH-HHCCCCHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 343444002345667178648999845764022-3202110122057333100368874445544645667656679985
Q 001813 818 EALNETVCVFDKCEGLTIIGKYYLRIDPVGEAA-KWRRSFGQEIYSPFLLAFTEQDGDHWANSHLATYSAMDTTYVLPDN 896 (1010)
Q Consensus 818 e~l~e~~~~~~~~~gl~v~~~~~l~l~~~~~~~-~~~r~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~l~~~~~lP~~ 896 (1010)
+|..|.++ .|. ..|.+.+.+..... ...++.+++++.|++.+...... .....+++.+. .-|++
T Consensus 789 ~p~p~a~~-----~G~---h~f~yal~~~~g~~~~~~~~~a~~~~~Pl~~~~~~~~~----~~~~~~~s~l~---~~~~~ 853 (923)
T 2wyh_A 789 FPTPEAQC-----LGK---HSLSYSFESITKQTQFASYWRAQEGQVPVITTQTNQHE----GTLAAEYSYLT---GTNDQ 853 (923)
T ss_dssp CBCGGGGC-----CEE---EEEEEEEEEEETTTHHHHHHHHHHTTSCCEEEECCSCC----CSBCSEEESCB---CCCTT
T ss_pred CCCCHHHH-----CEE---EEEEEEECCCCCCHHHHHHHHHHHHHCCHHHEECCCCC----CCCCCCCCCEE---CCCCC
T ss_conf 36833574-----127---99999971168864688999999873877513347665----76776665302---28997
Q ss_pred CEEEEEEECCC-CCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCHHHHHHHCCEEEEECCCCCC
Q ss_conf 14889665189-93799874011234668995002354131177675353884232355025573102122454299887
Q 001813 897 VALITLQELDS-GKILLRLAHLYEIEEDTDLSVMSSVELKKVFPKKKISKVTEMNLSANQERAVMEKKRLVWRVEGSSKE 975 (1010)
Q Consensus 897 vhlltl~~~~~-~~illRl~~l~~~~~~~~~s~~~~v~l~~lf~~~~v~~i~EtsLtg~~~~~~~~~~r~~w~~~~~~~~ 975 (1010)
|+|.+||+.++ +.++||+.|..... .+++.+ .+.+..+.+++|.+... .+
T Consensus 854 v~l~alK~aed~~~~ilRl~n~~g~~-------~~~l~~-----~~~~~~~~~~~llE~~~-~~---------------- 904 (923)
T 2wyh_A 854 VALTAFKRRLADNALITRSYNLSNDK-------TCDFSL-----SLPNYNAKVTNLLEKDS-KQ---------------- 904 (923)
T ss_dssp EEEEEEEECTTTCCEEEEEEESCSSC-------CEECCC-----BCTTEEEEEECTTCCBC-SC----------------
T ss_pred EEEEEEEECCCCCCEEEEEECCCCCC-------CEEEEE-----CCCCCEEEEEECCCCCC-CC----------------
T ss_conf 89999888168994899972478985-------317883-----26654399952457504-54----------------
Q ss_pred CCCCCCCCCCCCCCCEEEECCCCEEEEEEEEE
Q ss_conf 88645788889997439954860578999995
Q 001813 976 QPTAVRGSPVDPAKLVVELAPMEIRTFVIEFY 1007 (1010)
Q Consensus 976 ~~~~~~~~~~~~~~~~v~l~P~eIrTf~i~~~ 1007 (1010)
. . .++|.|.||+||++.++
T Consensus 905 -------~--~----~~~l~p~ei~T~~l~~~ 923 (923)
T 2wyh_A 905 -------S--T----PSQLGKAEILTLAWKKQ 923 (923)
T ss_dssp -------C--C----CSEECTTCEEEEEEEEC
T ss_pred -------C--C----CCEECCCCEEEEEEEEC
T ss_conf -------6--5----10176761489999959
No 3
>3lvt_A Glycosyl hydrolase, family 38; PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.55A {Enterococcus faecalis}
Probab=1.00 E-value=1 Score=1062.26 Aligned_cols=814 Identities=15% Similarity=0.166 Sum_probs=625.3
Q ss_pred CCCEEEEEEECCCCCCCCCCCHHEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEE-CHHHHHHHHHCCCHHHHHH
Q ss_conf 981399998163578853200210242467640136699999979999880999739991-1257899984179799999
Q 001813 33 PGKINVHLVPHSHDDVGWLKTVDQYYVGSNNSIQVACVQNVLDSLIPALVADKNRKFIYV-EQAFFQRWWRDQSEEVQNV 111 (1010)
Q Consensus 33 ~~~~~vhlvpHSH~D~gWl~t~~ey~~~~~~~i~~~~v~~il~~vi~~L~~~p~~kF~~~-e~~~~~~w~~~~~p~~~~~ 111 (1010)
+.+.+||+|||||||+|||||++||+ .++.++|++|+++|+++|+++|++. ++.++++||.+++|+.+++
T Consensus 4 m~~~~v~~v~HsH~D~~Wl~t~~e~~---------~~~~~~~~~~l~~l~~~p~~~f~~~~~q~~~~~~~~~~~p~~~~~ 74 (899)
T 3lvt_A 4 MTKKKVYIVSHSHWDREWYLPYEEHH---------MRLIELVDNVLDLIENDPEFNSFHLDGQTIILDDYLQVRPEKKEA 74 (899)
T ss_dssp CCCEEEEEEEEECC----CCCHHHHH---------HHHHHHHHHHHHHHHHCTTCCCEECTTBTHHHHHHHHHCGGGHHH
T ss_pred CCCCEEEEECCCCCCHHHCCCHHHHH---------HHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCHHHHHH
T ss_conf 54650999797778857657199999---------999999999999998699952899804199999998639999999
Q ss_pred HHHHHHCCCEEEECCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCEEEEE
Q ss_conf 99999879879983134110248999688999999999999987299973015618898865668999863499389995
Q 001813 112 VKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFA 191 (1010)
Q Consensus 112 vk~LV~~GrlE~vgggwv~~Dea~~~~esiIrql~~G~~~l~~~fG~~p~v~w~~D~FGhs~~~p~ll~~~~G~~~~~~~ 191 (1010)
||+||++|||| |||||||+||+++|+||+||||++||+|+++ ||+.|++||+||+||||++||||| +++||++++|+
T Consensus 75 vk~lv~~Gr~e-igg~~v~~D~~~~~~es~irq~~~G~~~~~~-fG~~~~~~w~~D~FG~s~~lp~i~-~~~Gi~~~~~~ 151 (899)
T 3lvt_A 75 VKKAVQAGKLK-IGPFYILQDDFLISSESNVRNMLIGHLESQK-WGAPVQLGYFPDTFGNMGQTPQMM-QLANLPAAAFG 151 (899)
T ss_dssp HHHHHHTTSEE-CCSBSSCCCGGGSCHHHHHHHHHHHHHHHHH-HTCCCCCEEESCCCT---THHHHH-HTTTCCEEEEC
T ss_pred HHHHHHCCCEE-ECCHHCCCCCCCCCHHHHHHHHHHHHHHHHH-CCCCCCEEEECCCCCCCHHHHHHH-HHCCCCEEEEE
T ss_conf 99999849889-7741202655579989999999999999997-399986237278998736799999-97699749993
Q ss_pred ECC----HHHHHHH--HCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 038----7769974--2059405999517999998722575288997999989763348899973379666689967899
Q 001813 192 RID----YQDRAKR--INEKTLEVVWRASKSLGSSAQIMTGISPKNYEPPSDNFYFEVGDTSPIVQDDMNLFDYNVPERV 265 (1010)
Q Consensus 192 Ri~----~~~~~~~--~~~~~~eF~W~~~d~~~~gs~i~t~~~~~~Y~~p~~~f~f~~~~~~~~~~~~~~~~~~nv~~~~ 265 (1010)
|++ |+..+.. -..+.++|+|+|+| |++||||++|++|+.+ .. .| ...++++.++
T Consensus 152 Rg~~~~~~~~~k~~~~~~~p~~~F~W~g~d----Gs~vlt~~~~~~Y~~g---~~-------~p------~~~~~~~~~~ 211 (899)
T 3lvt_A 152 RGVKPIGFDNQVLESDYSSQYSEMWWEGPD----QTKIFGLLFANWYSNG---NE-------IP------SEKEAAIAFW 211 (899)
T ss_dssp ---------------------CEEEEECTT----SCEEEEEECCCC-------CC-------SC------SSHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEECCC----CCEEEEEECCCCCCCC---CC-------CC------CCHHHHHHHH
T ss_conf 344544444312211247877469997799----9849999777767676---67-------98------7689999999
Q ss_pred HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHHCC-CCCCCCCC
Q ss_conf 999999999720039980899605798773147889999999999850-8973699769132499988439-99987557
Q 001813 266 NDFVSAAIAQANITRTNHIMWTMGTDFKYQYAHTWFRQMDKFIHYVNQ-DGRVNALYSTPSMYIDAKYAAN-ESWPLKTD 343 (1010)
Q Consensus 266 ~~~~~~~~~~~~~~~t~~il~~~G~Df~y~~a~~~f~~~~~li~~~N~-~~~~~i~~sT~~~Yf~a~~~~~-~~~p~~~g 343 (1010)
+.+++.++ ..++++++|+|+|+|+.+. +++|+++|+++|+ .+.+++++||+++||++++++. ..||+++|
T Consensus 212 ~~~~~~~~---~~~~t~~il~~~G~D~~p~-----~~~l~~~i~~~n~~~p~~~~~~st~~~yf~~l~~~~~~~lp~~~G 283 (899)
T 3lvt_A 212 KQKLADVE---RYASTNHLLMMNGVDHQPV-----QRDITKAIALANELFPEYEFIHSNFDDYLKAVQEELPEDLGTVTG 283 (899)
T ss_dssp HHHHHHHH---HHCSSSEEEEEEEEC-----------CHHHHHHHHHHHCSSEEEEECCHHHHHHHHHHTCC--CCEEEC
T ss_pred HHHHHHHH---HHCCCCEEEEEECCCCCCH-----HHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCC
T ss_conf 99999887---5068871899546899960-----788999999997309985499769999999998752233772456
Q ss_pred CCC-CCCCCCCCCEE-EEECCCCHHHHHHHHHHHHHH-HHHHHHHHC---CCCCCCCCHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 874-35545887312-542032003579997549999-998866510---234679735899999985502456567653
Q 001813 344 DFF-PYADRENAYWT-GYFTSRPALKGYVRTMSAYYL-AARQLEFFK---GRNEVGLSTDSLADALALVQHHDAVSGTEK 417 (1010)
Q Consensus 344 Df~-py~~~~~~yWt-G~~TSR~~~K~~~R~~e~~L~-~ae~l~~l~---~~~~~~~~~~~lw~~l~~~QhHDaItGTs~ 417 (1010)
||+ +|+++ -||+ |||||||++|++||++|++|+ +||+|++++ +..|+...++++|+.|+++||||+|||||+
T Consensus 284 El~~~~~~G--~yt~~~~~sSr~~~K~~nR~~E~~L~~~aE~l~~la~~~g~~yp~~~l~~~Wk~ll~~Q~HD~i~Gtsi 361 (899)
T 3lvt_A 284 ELTSQETDG--WYTLANTSSARVYLKQWNTKVQRQLENIAEPLAAMAYEVTGDYPHDQFDYAWKTLLQNHPHDSICGCSV 361 (899)
T ss_dssp CC-------------CGGGGBTHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCCCHHHHHHHHHHHHTTCSTTTTTSCSC
T ss_pred CCCCCCCCC--EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 514644586--279778231279999999999999999999999999973788857999999999846378876677586
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEE
Q ss_conf 11288999999999999999999999987224579888997675334665544689985446899714999994999247
Q 001813 418 QHVADDYAKRLSIGYTEAEKVVAASLACLTEFSKNGCVNPITNFQQCPLLNISYCPPSEVDLSSGKSLVVVVYNPLGWKR 497 (1010)
Q Consensus 418 ~~V~~dy~~rl~~a~~~~~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~ln~s~c~~~~~~~~~~~~~~v~vfNpl~~~r 497 (1010)
++|++||..||.++...++.+++.+++.|+..... +.. ..+...++|||||+|+|
T Consensus 362 ~~V~~d~~~~~~~~~~~~~~l~~~al~~l~~~~~~-------------------~~~------~~~~~~v~vfN~l~~~r 416 (899)
T 3lvt_A 362 DEVHRGMMTRFENANDVGHFLADEATRQLTEAIDT-------------------SVF------PEKAHPFVLFNTSGYQK 416 (899)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTBCC-------------------TTS------CTTCEEEEEEECSSSCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-------------------CCC------CCCCCEEEEEECCCCEE
T ss_conf 79999999999999999999999999999851566-------------------667------77887799992999603
Q ss_pred EEEEEEEEEC----------------------CEEEEECCCCCEEEEEEEECCCCCCC-CCCCCCCCCCCCCCCCCCCEE
Q ss_conf 6899999708----------------------72999959997888898406311111-223332222488878888489
Q 001813 498 EDIIRIPVIN----------------------ENVTVKDSKGKVIESQLLPLLKDSMS-LRNSYSTAYLGKSTNVTPSYW 554 (1010)
Q Consensus 498 ~~~V~i~v~~----------------------~~~~v~d~~G~~v~~Qi~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 554 (1010)
+++|++++.. +.+.|.|.+|++||+|+++....... ++... ...+.....+.
T Consensus 417 ~~~V~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~d~~G~~v~~qv~~~~~~~~~~l~~~~-----~~~~~~~~~~~ 491 (899)
T 3lvt_A 417 TEVVTVEVEIERLPFYTGKPEDLYHELKQKATPDYQVIDPTGKAVASRIVKEDVRFGYDLPKDA-----FRQPYMAKYLT 491 (899)
T ss_dssp EEEEEEEEEEEEEEGGGSCHHHHHHHHHHSCCCCEEEECSSSCEECCEEEEEEEEEEECCC----------CEEEEEEEE
T ss_pred EEEEEEEEECCCCCCCCCCCHHHHHHHCCCCCCCEEEECCCCCEEEEEEEECCCCCCCCCCCCC-----CCCCCCCCEEE
T ss_conf 2699999872544323345101100000136785499989999974899514542123356554-----45543121489
Q ss_pred EEEEE-ECCCCCEEEEEEEECCCCCCCCCCCEEEECCCCCCCCEEECCCEEEEEEECCCCEEEEEEECCCCCEEEEEEEE
Q ss_conf 99997-31998237999981775567665320222034689813973774999996887708999955787399999999
Q 001813 555 LAFSA-SVPPLGFNTYIISSAKQAASHSGMRTVYKSQIRQNDTIEVGPGNLKLLYSGKRAKLMRYINSKTSVNKLLEQSY 633 (1010)
Q Consensus 555 l~f~a-~iPplG~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ieN~~~ki~~~~~~G~l~si~dk~~g~~~~~~~~~ 633 (1010)
|.|.+ +||||||++|.|.+........ .+ ....+..+|||++++|+|| .+|.| +|+||.+|+++. ++
T Consensus 492 l~f~a~~vPalGy~~~~i~~~~~~~~~~---~~----~~~~~~~~leN~~~~v~~d-~~G~l-sl~Dk~~gre~~---~~ 559 (899)
T 3lvt_A 492 VELSVKEMAPFSWDSFALIQGETKAFEG---SL----LAQPATNEMENEFIQVKIE-NNGSL-TIADKKTGETFS---KL 559 (899)
T ss_dssp EEEEEEEECTTEEEEEEEEESCCCCCCS---CC----SEETTTTEEECSSEEEEEC-TTSCE-EEEETTTCCEEE---EE
T ss_pred EEEEECCCCCCCCEEEEEEECCCCCCCC---CC----CCCCCCCEEECCCEEEEEC-CCCCE-EEEECCCCEEEE---EE
T ss_conf 9999467787777799998467666543---21----2356673774573899994-89848-999988990998---77
Q ss_pred EEEECCCCCCCCCCCCCEEEECCCC-CCCCCCC-CCEEEE-EECCCEEEEEEEEC-------------------------
Q ss_conf 9942489999999976506707999-7647999-755999-95781679999976-------------------------
Q 001813 634 IYYRGDDGSKDLQPSGAYIFRPNGT-YPIEPEG-QLSFTI-LRGPLLDEVHQRIN------------------------- 685 (1010)
Q Consensus 634 ~~Y~~~~g~~~~~~sgaY~F~P~~~-~~~~~~~-~~~i~v-~~Gpl~~ev~~~~~------------------------- 685 (1010)
..|.+. ++.+++|+|+|+.. .++.... ...+++ .+||++++|++.+.
T Consensus 560 ~~~~d~-----gd~g~~Y~~~p~~~d~~~~~~~~~~~v~v~e~gpl~~~v~v~~~~~~P~~~~~~~~~~~~~~~~~~~r~ 634 (899)
T 3lvt_A 560 LTFEDT-----GDIGNEYIFFKPTEDQGITTENVTAEITNKENSPVKASYQIKQTVMLPVAADERLEEEQKAVREFRERL 634 (899)
T ss_dssp TEEEEE-----ECCSBTTBCCCCTTCCCEESTTCCCEEEEEEECSSEEEEEEEEEEEEESSBCTHHHHHHHTTCCGGGCC
T ss_pred EEEECC-----CCCCCCEEECCCCCCCEEECCCCCCEEEEEECCCCEEEEEEEEEECCCCCHHHHHCCCCCCCCCCHHHH
T ss_conf 899537-----887884365587678224446777339999758888999999998156431232100001111000122
Q ss_pred ---C------EEEEEEEEECCCCCEEEEEEECCCCCCCCCCCEEEEEEEEECCCCCEEEECCCCCCCEECCCCCCCCCCC
Q ss_conf ---8------0999999971899427999977511359998289999996135796799828863100013333467544
Q 001813 686 ---P------WIYQVTRVYKGKDHAEIEFTVGPIPIDDGIGKEVVTQITSNMISNKTFYTDSSGRDFIERIRDYRKDWNL 756 (1010)
Q Consensus 686 ---~------~i~~~irL~~~~~~ie~e~~v~~i~~~~~~~~ev~~~f~T~i~s~~~fyTDsnG~~~i~R~~~~r~~w~~ 756 (1010)
+ +++|+++|++++++|||+++|++. ..+|++++.|+|+|.++..+| ..+||+++|+++.+++|+
T Consensus 635 ~~~S~~~~~~~i~q~i~L~~~~~~id~~~~Vdw~----~~~~~Lrv~Fp~~i~s~~~~~--d~~fG~i~Rpt~~~t~We- 707 (899)
T 3lvt_A 635 AQRSTTLRPFEITTMVTMIKESNQLFFETTINNQ----IKDHRLRVLFPTGMVTETHEA--DSIYEVVTRPNQVSDTWE- 707 (899)
T ss_dssp CCBCSCEEEEEEEEEEEEETTCCCEEEEEEEEEC----CCSEEEEEEECCSCCCSEEEE--ECSSSEEEEEC--------
T ss_pred HCCCCCCCCEEEEEEEEEECCCCEEEEEEEECCC----CCCEEEEEECCCCCCCCCEEE--ECCCEEEECCCCCCCCCC-
T ss_conf 0456555516899999993799779999998787----589899998878777685588--426469987899976665-
Q ss_pred CCCCCCCCCEEECCCEEEEEECCCCEEEEEECCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEE
Q ss_conf 55666663167415134578367314898504554213679748999996422568648333434440023456671786
Q 001813 757 EVNQPIAGNYYPVNLGIYMKDNSSELSILVDRSVGGSSIADGQLELMLHRRLVADDNRGVSEALNETVCVFDKCEGLTII 836 (1010)
Q Consensus 757 ~~~~pv~~NyYPv~s~i~I~D~~~~ltvltdr~~G~ssl~~G~iElml~Rrl~~DD~rGv~e~l~e~~~~~~~~~gl~v~ 836 (1010)
.++|+||+.+|++|+|.+.|++|+||+++|+++..+|+|+|||+|+...--.+|+-. --|. +|.| .
T Consensus 708 -----~a~~e~~~~~~vdlsd~~~Gvavlnd~~~gy~v~~d~~i~LTLlRs~g~lG~~g~~p-~Pda-----~~~G---~ 773 (899)
T 3lvt_A 708 -----NPTNPQHQQAFVNVHDQNKGVTIFNEGLNEYEVLADGTIAVTLIRCVGELGDWGYFA-TPEA-----QCQG---E 773 (899)
T ss_dssp -----CCCCCEECSSEEEEECSSCEEEEEESSCCEEEECTTCCEEEEEEEECSBCCTTSCCB-CGGG-----GCCE---E
T ss_pred -----CCCCCEEEEEEEEEECCCCEEEEEECCCCCEEECCCCEEEEEEECCCCCCCCCCCCC-CCCH-----HHHC---C
T ss_conf -----787653101499986698249999689754357679879999841467655467758-9663-----6518---5
Q ss_pred EEEEEEECCCCC---HHHHCCCCHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCC-CCEEE
Q ss_conf 489998457640---22320211012205733310036887444554464566765667998514889665189-93799
Q 001813 837 GKYYLRIDPVGE---AAKWRRSFGQEIYSPFLLAFTEQDGDHWANSHLATYSAMDTTYVLPDNVALITLQELDS-GKILL 912 (1010)
Q Consensus 837 ~~~~l~l~~~~~---~~~~~r~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~l~~~~~lP~~vhlltl~~~~~-~~ill 912 (1010)
+.|.+.+-+... .+.. -+.+++++.|+..+-..... ......+|.+. .-+++|.+-++|+.++ +.+++
T Consensus 774 h~F~yal~ph~g~~~~~~~-~~~a~~~n~pl~~~~~~~~~----~~l~~~~s~~~---~~~~~v~lsavK~aEd~~~~Il 845 (899)
T 3lvt_A 774 YTFKYGLSLHGKPEERFAT-YQQAYSAQIPFTAATTARHE----GKLAPNHVYLT---TAEGPIGWTAVKRQEQTNHLVV 845 (899)
T ss_dssp EEEEEEEEEESSGGGHHHH-HHHHHHHTSCCEEEECCSCC----CSBCSEEESEE---CCCSSEEEEEEEECTTTCCEEE
T ss_pred EEEEEEEEECCCCCHHHHH-HHHHHHHCCCCCEEECCCCC----CCCCCCCCCEE---ECCCCEEEEEEEEEECCCCEEE
T ss_conf 6999999954797125489-99999864984224426566----76777666436---4799899999886143996899
Q ss_pred EEECCCCCCCCCCCCCEEEEECCCCCCCCC-CCEEEECCCCCCCHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 874011234668995002354131177675-3538842323550255731021224542998878864578888999743
Q 001813 913 RLAHLYEIEEDTDLSVMSSVELKKVFPKKK-ISKVTEMNLSANQERAVMEKKRLVWRVEGSSKEQPTAVRGSPVDPAKLV 991 (1010)
Q Consensus 913 Rl~~l~~~~~~~~~s~~~~v~l~~lf~~~~-v~~i~EtsLtg~~~~~~~~~~r~~w~~~~~~~~~~~~~~~~~~~~~~~~ 991 (1010)
|+ |+..... +++.+. +. +..+.+|+|.... +. + .....
T Consensus 846 Rl---ye~~g~~-----~~l~~~-----~~~~~~~~~~nllE~~-~~------------~---------------~~~~~ 884 (899)
T 3lvt_A 846 RG---FNLTAQN-----IPCELH-----KETQPATCLTNVLEEP-LT------------P---------------AIEVD 884 (899)
T ss_dssp EE---EECSSSC-----BCCCCE-----ETTEECCEEECTTSCB-CS------------S---------------CCCTT
T ss_pred EE---ECCCCCC-----EEEEEC-----CCCCCCEEEECCCCCC-CC------------C---------------CCCEE
T ss_conf 99---7189996-----778974-----4765516880056665-66------------7---------------86024
Q ss_pred EEECCCCEEEEEEE
Q ss_conf 99548605789999
Q 001813 992 VELAPMEIRTFVIE 1005 (1010)
Q Consensus 992 v~l~P~eIrTf~i~ 1005 (1010)
+.|+|.||+|++|+
T Consensus 885 ~~~~pfeI~T~~~~ 898 (899)
T 3lvt_A 885 APLRPFEIRTWRFE 898 (899)
T ss_dssp SCBCTTCEEEEEEC
T ss_pred EEECCCEEEEEEEE
T ss_conf 42757058999970
No 4
>1o7d_A Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: c.6.2.1
Probab=1.00 E-value=1 Score=622.31 Aligned_cols=294 Identities=49% Similarity=0.869 Sum_probs=283.2
Q ss_pred EEECCCCCCCCCCEEEEEEECCCCCCCCCCCHHEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHH
Q ss_conf 35337999999813999981635788532002102424676401366999999799998809997399911257899984
Q 001813 23 MMYNTSAGIVPGKINVHLVPHSHDDVGWLKTVDQYYVGSNNSIQVACVQNVLDSLIPALVADKNRKFIYVEQAFFQRWWR 102 (1010)
Q Consensus 23 ~~~~~~~~~~~~~~~vhlvpHSH~D~gWl~t~~ey~~~~~~~i~~~~v~~il~~vi~~L~~~p~~kF~~~e~~~~~~w~~ 102 (1010)
|+|++|+.+++++++||+|||||+|+||+||+++|++++++.|+.+++.+++++|+++|+++|++||+|+|++++++||+
T Consensus 1 ~~~~~~~~~~~~~~~v~~v~HsH~D~gWl~t~~e~~~~~~~~i~~~~~~~~~~~vl~~l~~~p~~~F~~~e~~~~~~w~~ 80 (298)
T 1o7d_A 1 AGYKTCPKVKPDMLNVHLVPHTHDDVGWLKTVDQYFYGIYNNIQPAGVQYILDSVISSLLANPTRRFIYVEIAFFSRWWR 80 (298)
T ss_dssp -CCTTCCCCCSSSEEEEEEEBCBCCSSSSSCHHHHHHTCCTTTCCCCHHHHHHHHHHHHHHCTTCCEEECCHHHHHHHHH
T ss_pred CCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH
T ss_conf 98767887788752799957788851334549886016430367899999999999999878997699965167699999
Q ss_pred CCCHHHHHHHHHHHHCCCEEEECCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCC--CCEEEECCCCCCCHHHHHHHH
Q ss_conf 179799999999998798799831341102489996889999999999999872999--730156188988656689998
Q 001813 103 DQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIKEQFNVT--PRIGWQIDPFGHSAVQAYLLS 180 (1010)
Q Consensus 103 ~~~p~~~~~vk~LV~~GrlE~vgggwv~~Dea~~~~esiIrql~~G~~~l~~~fG~~--p~v~w~~D~FGhs~~~p~ll~ 180 (1010)
+++|+.+++||+||++|||||+||||||+||+++++||+||||++|++|++++||+. |++||+||+||||+++|+||
T Consensus 81 ~~~Pe~~~~vk~lV~~Grle~vgG~wve~D~~~~~~eslirQl~~G~~~~~~~fG~~~~~~~~W~pD~FG~s~~lP~il- 159 (298)
T 1o7d_A 81 QQTNATQKIVRELVRQGRLEFANGGWVMNDEATTHYGAIIDQMTLGLRFLEETFGSDGRPRVAWHIDPFGHSREQASLF- 159 (298)
T ss_dssp TSCHHHHHHHHHHHHTTSEEESSCSSSCBCSSSCCHHHHHHHHHHHHHHHHHHHGGGGCCSEEEESSSSSCCHHHHHHH-
T ss_pred HCCHHHHHHHHHHHHCCCEEEECCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHH-
T ss_conf 6599999999999977988997853213345789989999999999999999849987886468478998667899999-
Q ss_pred HHCCCCEEEEEECCHHHHHHHHCCCCEEEEEEECCCCC-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 63499389995038776997420594059995179999-98722575288997999989763348899973379666689
Q 001813 181 AEVGFDFLFFARIDYQDRAKRINEKTLEVVWRASKSLG-SSAQIMTGISPKNYEPPSDNFYFEVGDTSPIVQDDMNLFDY 259 (1010)
Q Consensus 181 ~~~G~~~~~~~Ri~~~~~~~~~~~~~~eF~W~~~d~~~-~gs~i~t~~~~~~Y~~p~~~f~f~~~~~~~~~~~~~~~~~~ 259 (1010)
+++||++++++|++|++++.+...+.+||+|+|+++++ +|++||||++|.+|++| .|||||..|.++|++++|.++++
T Consensus 160 ~~~Gi~~~~~~R~~~~~~~~~~~~~~~eF~W~g~~~~~~dgs~i~t~~~~~~Y~~~-~g~~fd~~~~~~p~~~~~~~~~~ 238 (298)
T 1o7d_A 160 AQMGFDGFFFGRLDYQDKKVRKKTLQMEQVWRASTSLKPPTADLFTSVLPNMYNPP-EGLCWDMLCADKPVVEDTRSPEY 238 (298)
T ss_dssp HHHTCCEEEESCCCHHHHHHHHHTTCSEEEEECCSSSCTTTTEEEEEECSSTTSCC-TTCCCSTTCCCCCCCCCTTSTTC
T ss_pred HHCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCC-CCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 97599869998334000000145788338987898878999968999727887898-87623456677674677411477
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEE
Q ss_conf 96789999999999972003998089960579877314788999999999985089736
Q 001813 260 NVPERVNDFVSAAIAQANITRTNHIMWTMGTDFKYQYAHTWFRQMDKFIHYVNQDGRVN 318 (1010)
Q Consensus 260 nv~~~~~~~~~~~~~~~~~~~t~~il~~~G~Df~y~~a~~~f~~~~~li~~~N~~~~~~ 318 (1010)
|++++++.|++++++++++|+|++||+|+|+||+|.+|..||.||++||+++|++..++
T Consensus 239 nv~~r~~~~~~~~~~~a~~~~t~~vl~p~G~Df~~~~a~~~f~n~~~li~~iN~~~~~~ 297 (298)
T 1o7d_A 239 NAKELVRYFLKLATDQGKLYRTKHTVMTMGSDFQYENANTWFKNLDKLIQLVNAQQRAN 297 (298)
T ss_dssp CHHHHHHHHHHHHHHHHTTSSSSEEEEEECCBTCCTTHHHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 99999999999999987505788377226788786406689988999999996067568
No 5
>1o7d_D Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6
Probab=1.00 E-value=1 Score=511.03 Aligned_cols=272 Identities=38% Similarity=0.668 Sum_probs=254.4
Q ss_pred CEEECCCEEEEEEECCCCEEEEEEECCCCCEEEEEEEEEEEECCCCC-CCCCCCCCEEEECCCCCCCCCCCCCEEEEEEC
Q ss_conf 13973774999996887708999955787399999999994248999-99999765067079997647999755999957
Q 001813 596 TIEVGPGNLKLLYSGKRAKLMRYINSKTSVNKLLEQSYIYYRGDDGS-KDLQPSGAYIFRPNGTYPIEPEGQLSFTILRG 674 (1010)
Q Consensus 596 ~~~ieN~~~ki~~~~~~G~l~si~dk~~g~~~~~~~~~~~Y~~~~g~-~~~~~sgaY~F~P~~~~~~~~~~~~~i~v~~G 674 (1010)
.+.|+|+++++.|++.+|+|++++++.+|.+..+.++|.+|.+..|+ .+.+.||||+|+|++..+.++.....+.+++|
T Consensus 2 ~~~i~n~~~~l~fd~~tG~L~si~~~~~g~~~~v~q~f~~Y~s~~g~~~~~~~SGAYiFrP~g~~~~~~~~~~~~~v~~G 81 (282)
T 1o7d_D 2 DLVIQNEYLRARFDPNTGLLMELENLEQNLLLPVRQAFYWYNASTGNNLSSQASGAYIFRPNQNKPLFVSHWAQTHLVKA 81 (282)
T ss_dssp CCEEECSSEEEEECTTTCSEEEEEEC---CEEECEEEEEEEEBCCCBTTBSCCCCSSCCCBSSSSCEESCSCCEEEEEEC
T ss_pred CEEECCCEEEEEECCCCCCEEEEEECCCCEEEEEEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEEEC
T ss_conf 57870765999988999868999986788088776789999534688877888726896579987743378847999979
Q ss_pred CCEEEEEEEECCEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCEEEEEEEEECCCCCEEEECCCCCCCEECCCCCCCCC
Q ss_conf 81679999976809999999718994279999775113599982899999961357967998288631000133334675
Q 001813 675 PLLDEVHQRINPWIYQVTRVYKGKDHAEIEFTVGPIPIDDGIGKEVVTQITSNMISNKTFYTDSSGRDFIERIRDYRKDW 754 (1010)
Q Consensus 675 pl~~ev~~~~~~~i~~~irL~~~~~~ie~e~~v~~i~~~~~~~~ev~~~f~T~i~s~~~fyTDsnG~~~i~R~~~~r~~w 754 (1010)
|++++|++.+++|++|++|||++..++|++|+|+|||++++.|+|+++||.|+|+|+++||||+||++|++|++++|++|
T Consensus 82 ~lv~eV~~~~~~~~sq~~Rly~~~~~vE~e~~Vgpipi~d~~~kEiv~r~~T~i~s~~~FYTDsNG~e~~kR~~~~r~~~ 161 (282)
T 1o7d_D 82 SLVQEVHQNFSAWCSQVVRLYPRQRHLELEWTVGPIPVGDGWGKEVISRFDTALATRGLFYTDSNGREILERRRNYRPTW 161 (282)
T ss_dssp SSCEEEEEEEETTEEEEEEECTTCSSEEEEEEECCCCCTTSCCEEEEEEEECCCCCTTEEEEESTTSSEEEEETTCCSSS
T ss_pred CEEEEEEEEECCCEEEEEEEECCCCEEEEEEEECCCCCCCCCCCEEEEEEEEEECCCCEEEECCCCCEEEEEEECCCCCC
T ss_conf 89999999978968999999368953899999855113688884899999855156996889789803057882456565
Q ss_pred CCCCCCCCCCCEEECCCEEEEEECCCCEEEEEECCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 44556666631674151345783673148985045542136797489999964225686483334344400234566717
Q 001813 755 NLEVNQPIAGNYYPVNLGIYMKDNSSELSILVDRSVGGSSIADGQLELMLHRRLVADDNRGVSEALNETVCVFDKCEGLT 834 (1010)
Q Consensus 755 ~~~~~~pv~~NyYPv~s~i~I~D~~~~ltvltdr~~G~ssl~~G~iElml~Rrl~~DD~rGv~e~l~e~~~~~~~~~gl~ 834 (1010)
+.+.++|+++|||||+++|+|+|.+.||+|++|||+||||+++|+||||||||+++||+|||||+|||++ +|++
T Consensus 162 ~~~~~~pv~gNYYPv~s~~~IqD~~~rltvl~drs~G~sSl~~G~lElMlhRRl~~DD~rGvge~l~d~~------~gl~ 235 (282)
T 1o7d_D 162 KLNQTEPVAGNYYPVNSRIYITDGNMQLTVLTDRSQGGSSLRDGSLELMVHRRLLKDDARGVGEPLNKEG------SGLW 235 (282)
T ss_dssp CCCCSCTTGGGCEEESSEEEEECSSEEEEEEESSCEEECCSSTTEEEEEEEEECSSCCSSSCCSCSCCCG------GGGS
T ss_pred CCCCCCCCCCCEEEEEEEEEEECCCEEEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCC------CCEE
T ss_conf 4343567656365001279998288289999633563300689759999863404466321154434558------8808
Q ss_pred EEEEEEEEECCCCCHHHHCCCCHHHHCCCCEEEECCCCC
Q ss_conf 864899984576402232021101220573331003688
Q 001813 835 IIGKYYLRIDPVGEAAKWRRSFGQEIYSPFLLAFTEQDG 873 (1010)
Q Consensus 835 v~~~~~l~l~~~~~~~~~~r~~~~~~~~p~l~~~~~~~~ 873 (1010)
++|+|||+|++...++..+|..++++.+||+++|+..+.
T Consensus 236 v~g~~~l~l~~~~~~~~~~r~~~~~~~~p~~~~fs~~~~ 274 (282)
T 1o7d_D 236 VRGRHLVLLDKKETAAARHRLQAEMEVLAPQVVLAQGGG 274 (282)
T ss_dssp EEEEEEEEEEEHHHHHHHHHHHHHHHHSCCEEEEEEC--
T ss_pred EEEEEEEEEECCCCCHHHHHHHHHHHHCCHHHHEECCCC
T ss_conf 889999998086432134347888664850620104787
No 6
>1o7d_C Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 b.30.5.6
Probab=1.00 E-value=1 Score=234.13 Aligned_cols=151 Identities=41% Similarity=0.692 Sum_probs=133.9
Q ss_pred CHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 35899999985502456567653112889999999999999999999999872245798889976753346655446899
Q 001813 395 STDSLADALALVQHHDAVSGTEKQHVADDYAKRLSIGYTEAEKVVAASLACLTEFSKNGCVNPITNFQQCPLLNISYCPP 474 (1010)
Q Consensus 395 ~~~~lw~~l~~~QhHDaItGTs~~~V~~dy~~rl~~a~~~~~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~ln~s~c~~ 474 (1010)
.++++||+|+++||||+||||++++|++||..||..++..++.+++.+++.|+... .+|.+|.++|++.|+.
T Consensus 2 ~L~~~~k~l~~~QhHDaItGts~~~V~~Dy~~rl~~~~~~~~~l~~~~l~~L~~~~--------~~~~~~~~ln~~~~~~ 73 (159)
T 1o7d_C 2 DSAPLNEAMAVLQHHDAVSGTSRQHVANDYARQLSEGWRPCEVLMSNALAHLSGLK--------EDFAFCRKLNISICPL 73 (159)
T ss_dssp CSHHHHHHHHHTTBTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--------SCEECCTTGGGTCCHH
T ss_pred HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--------CCCCCCCCCCCCCCCC
T ss_conf 28999998747255776775575799999999999999999999999999985486--------5444234333331766
Q ss_pred CCCCCCCCCCEEEEEECCCCCEEEEEEEEEEECCEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 85446899714999994999247689999970872999959997888898406311111223332222488878888489
Q 001813 475 SEVDLSSGKSLVVVVYNPLGWKREDIIRIPVINENVTVKDSKGKVIESQLLPLLKDSMSLRNSYSTAYLGKSTNVTPSYW 554 (1010)
Q Consensus 475 ~~~~~~~~~~~~v~vfNpl~~~r~~~V~i~v~~~~~~v~d~~G~~v~~Qi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 554 (1010)
++. ++...++|||||+|+|+++|+++|+.+.+.|.|.+|++|++|+.+.+.. ..++
T Consensus 74 ~~~----~~~~~vvvfN~l~~~r~~~V~v~v~~~~~~v~d~~G~~v~~qi~~~~~~--------------------~~~~ 129 (159)
T 1o7d_C 74 TQT----AERFQVIVYNPLGRKVDWMVRLPVSKHVYLVKDPGGKIVPSDVVTIPSS--------------------DSQE 129 (159)
T ss_dssp HHH----CSEEEEEEEECSSSCEEEEEEEEECSSCEEEECSSSCEECCEEEEETTT--------------------TEEE
T ss_pred CCC----CCCEEEEEECCCCCEEEEEEEEEECCCCEEEECCCCCEEEEEEEECCCC--------------------CCEE
T ss_conf 567----7647999998998617479999986886899959979953699965688--------------------8449
Q ss_pred EEEEEECCCCCEEEEEEEECCCC
Q ss_conf 99997319982379999817755
Q 001813 555 LAFSASVPPLGFNTYIISSAKQA 577 (1010)
Q Consensus 555 l~f~a~iPplG~~~y~i~~~~~~ 577 (1010)
|.|.++||||||++|+|..++.+
T Consensus 130 l~f~a~vP~lG~~ty~i~~~~~~ 152 (159)
T 1o7d_C 130 LLFSALVPAVGFSIYSVSQMPNQ 152 (159)
T ss_dssp EEEEEEECTTEEEEEEEEECC--
T ss_pred EEEEEECCCCEEEEEEEEECCCC
T ss_conf 99996408864189999978999
No 7
>1o7d_E Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6
Probab=1.00 E-value=1 Score=200.53 Aligned_cols=119 Identities=34% Similarity=0.554 Sum_probs=105.5
Q ss_pred CCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCC--CCCCEEEEECCCCCCCCCCCEEEECCCCCCCHHHH
Q ss_conf 6456676566799851488966518993799874011234668--99500235413117767535388423235502557
Q 001813 882 ATYSAMDTTYVLPDNVALITLQELDSGKILLRLAHLYEIEEDT--DLSVMSSVELKKVFPKKKISKVTEMNLSANQERAV 959 (1010)
Q Consensus 882 ~~~~~l~~~~~lP~~vhlltl~~~~~~~illRl~~l~~~~~~~--~~s~~~~v~l~~lf~~~~v~~i~EtsLtg~~~~~~ 959 (1010)
.+|+++.. +||+||||+||++|+++++|||++|+|++++|+ .+|+|++|||+++|..++|.+++||+|+||+++++
T Consensus 3 ~~~s~l~~--~LP~nvhLlTLe~~~~~~iLlRl~hl~e~~ed~~~~~s~pv~v~l~~lF~~~~i~~i~EttLtgn~~~~~ 80 (126)
T 1o7d_E 3 TQFSGLRR--ELPPSVRLLTLARWGPETLLLRLEHQFAVGEDSGRNLSSPVTLDLTNLFSAFTITNLRETTLAANQLLAY 80 (126)
T ss_dssp CEECSBSS--CCCTTCEEEEEEEEETTEEEEEEECCCCTTTTTTTTCSSCEEEECSSSBSSSEEEEEEEECTTSSSBGGG
T ss_pred CCCCCCCC--CCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCEEEEHHHHHCCCCCCEEEEECCCCCCCCCC
T ss_conf 55476333--4998286789898689969999772042566754335751688589951506413699973636645210
Q ss_pred HHHCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEEEEC
Q ss_conf 31021224542998878864578888999743995486057899999523
Q 001813 960 MEKKRLVWRVEGSSKEQPTAVRGSPVDPAKLVVELAPMEIRTFVIEFYSE 1009 (1010)
Q Consensus 960 ~~~~r~~w~~~~~~~~~~~~~~~~~~~~~~~~v~l~P~eIrTf~i~~~~~ 1009 (1010)
+ +||+|++++.+... + .+.+.+.+.|+|.|||||||+|+++.+
T Consensus 81 ~--~Rl~w~~~~~~~~~----~-~~~~~~~~~vtL~PmEIRTFii~~~~~ 123 (126)
T 1o7d_E 81 A--SRLQWTTDTGPTPH----P-SPSRPVSATITLQPMEIRTFLASVQWE 123 (126)
T ss_dssp C--CCCCCCBC-------------------CEEEECTTCEEEEEEEEEC-
T ss_pred C--CCCCCCCCCCCCCC----C-CCCCCCCCEEEECCCCEEEEEEEEEEC
T ss_conf 0--10102347877545----5-665777765997686079999998744
No 8
>1k1x_A 4-alpha-glucanotransferase; 2.40A {Thermococcus litoralis} SCOP: a.8.3.2 b.30.5.8 c.6.2.2 PDB: 1k1w_A 1k1y_A*
Probab=1.00 E-value=1 Score=179.69 Aligned_cols=250 Identities=14% Similarity=0.182 Sum_probs=171.4
Q ss_pred CCEEEEEEECCCCCCC-CCCCHHEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCHHHHHHH
Q ss_conf 8139999816357885-320021024246764013669999997999988099973999112578999841797999999
Q 001813 34 GKINVHLVPHSHDDVG-WLKTVDQYYVGSNNSIQVACVQNVLDSLIPALVADKNRKFIYVEQAFFQRWWRDQSEEVQNVV 112 (1010)
Q Consensus 34 ~~~~vhlvpHSH~D~g-Wl~t~~ey~~~~~~~i~~~~v~~il~~vi~~L~~~p~~kF~~~e~~~~~~w~~~~~p~~~~~v 112 (1010)
.+.+|.+|.|+|.|.+ |.|.++ ..+...+..+++.|+++|++||...-...+..|+++.+|+..+++
T Consensus 2 ~~~~l~lv~H~HqP~~~~~~~~e------------~a~~~~Y~pll~ll~~~~~~k~~~~~s~~ll~~l~~~~p~l~~~i 69 (659)
T 1k1x_A 2 ERINFIFGIHNHQPLGNFGWVFE------------EAYNRSYRPFMEILEEFPEMKVNVHFSGPLLEWIEENKPDYLDLL 69 (659)
T ss_dssp CCEEEEEEEEECCCTTCCHHHHH------------HHHHHTHHHHHHHHTTCTTCCEEEEECHHHHHHHHHHCHHHHHHH
T ss_pred CCEEEEEEEECCCCCCCCCHHHH------------HHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCHHHHHHH
T ss_conf 83699999982179866707899------------999999999999998587957999866999999998797999999
Q ss_pred HHHHHCCCEEEECCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCEEEEEE
Q ss_conf 99998798799831341102489996889999999999999872999730156188988656689998634993899950
Q 001813 113 KQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFAR 192 (1010)
Q Consensus 113 k~LV~~GrlE~vgggwv~~Dea~~~~esiIrql~~G~~~l~~~fG~~p~v~w~~D~FGhs~~~p~ll~~~~G~~~~~~~R 192 (1010)
|+++++||+|++||+|+.++..+++.|++++|+.+|.++++ .||..|+..|+||. ++++.+|+++ +++||+++++..
T Consensus 70 k~l~~~G~vE~l~~~~~Hpi~~l~p~e~~~~QI~~g~~~~~-~FG~~P~G~WlPE~-~ys~~l~~iL-~~~Gi~y~~td~ 146 (659)
T 1k1x_A 70 RSLIKRGQLEIVVAGFYEPVLAAIPKEDRLVQIEMLKDYAR-KLGYDAKGVWLTER-VWQPELVKSL-REAGIEYVVVDD 146 (659)
T ss_dssp HHHHHTTCEEEEBCCTTCCCGGGSCHHHHHHHHHHHHHHHH-HTTCCCCEEECGGG-CBCTTHHHHH-HHTTCCEEEEEH
T ss_pred HHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH-HCCCCCCEEECCCC-CCCHHHHHHH-HHCCCCEEEECC
T ss_conf 99998799999836740001458999999999999999999-74997888987623-5676699999-986993999873
Q ss_pred CCHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEECCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 38776997420594059995179999987225752889---979999897633488999733796666899678999999
Q 001813 193 IDYQDRAKRINEKTLEVVWRASKSLGSSAQIMTGISPK---NYEPPSDNFYFEVGDTSPIVQDDMNLFDYNVPERVNDFV 269 (1010)
Q Consensus 193 i~~~~~~~~~~~~~~eF~W~~~d~~~~gs~i~t~~~~~---~Y~~p~~~f~f~~~~~~~~~~~~~~~~~~nv~~~~~~~~ 269 (1010)
-+...-...+...-..++... . |..|-... .. ++..| | . .++.++
T Consensus 147 ~~~~~~~~~p~~~~~py~~~~-~----g~~i~vf~-rd~~Lsd~i~---f--------------------~---~a~~~~ 194 (659)
T 1k1x_A 147 YHFMSAGLSKEELFWPYYTED-G----GEVITVFP-IDEKLRYLIP---F--------------------R---PVKKTI 194 (659)
T ss_dssp HHHHHHTCCGGGCSSCEEEEE-T----TEEEEEEE-ECHHHHHHTT---T--------------------S---CHHHHH
T ss_pred HHHCCCCCCCHHCCCCEEECC-C----CCEEEEEE-ECCCCHHCCC---C--------------------C---CHHHHH
T ss_conf 330568999310166468369-9----96799999-4475021047---7--------------------5---199999
Q ss_pred HHHHHHHHHCCCCEEEEEE-CCCCC-CCCHHHHHH---HHHHHHHHHHCCCCEEEEECCHHHHHHHHH
Q ss_conf 9999972003998089960-57987-731478899---999999998508973699769132499988
Q 001813 270 SAAIAQANITRTNHIMWTM-GTDFK-YQYAHTWFR---QMDKFIHYVNQDGRVNALYSTPSMYIDAKY 332 (1010)
Q Consensus 270 ~~~~~~~~~~~t~~il~~~-G~Df~-y~~a~~~f~---~~~~li~~~N~~~~~~i~~sT~~~Yf~a~~ 332 (1010)
+.+...........+.+++ |.-|. +.+...|+. -+..+++.+.+.. .+.+.|+++|++...
T Consensus 195 ~~L~~~~~~~~~~lV~i~~DgE~fGhw~~t~~w~~g~~fL~~l~~~l~~~~--~i~~~t~se~L~~~~ 260 (659)
T 1k1x_A 195 EYLESLTSDDPSKVAVFHDDGEKFGVWPGTYEWVYEKGWLREFFDAITSNE--KINLMTYSEYLSKFT 260 (659)
T ss_dssp HHHHTTCCSCTTCEEEEEEEGGGTTTSTTHHHHHTTTCHHHHHHHHHHHCT--TEEECCHHHHHHHCC
T ss_pred HHHHHHHCCCCCCEEEEEECHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCC--CEEEECHHHHHHHCC
T ss_conf 999986357999889998488981988765586176999999999986389--979986999997589
No 9
>1o7d_B Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 c.6.2.1
Probab=1.00 E-value=1 Score=159.20 Aligned_cols=74 Identities=53% Similarity=0.894 Sum_probs=70.7
Q ss_pred CEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 73699769132499988439999875578743554588731254203200357999754999999886651023
Q 001813 316 RVNALYSTPSMYIDAKYAANESWPLKTDDFFPYADRENAYWTGYFTSRPALKGYVRTMSAYYLAARQLEFFKGR 389 (1010)
Q Consensus 316 ~~~i~~sT~~~Yf~a~~~~~~~~p~~~gDf~py~~~~~~yWtG~~TSR~~~K~~~R~~e~~L~~ae~l~~l~~~ 389 (1010)
+++++||||+|||+++++.+..||+++||||||+|++++||||||||||.+|+++|+++++|++||+|.++++.
T Consensus 2 ~v~v~ysT~s~Yf~al~~~~~~~p~~~~DFfpYad~~~~yWtGyyTSRp~lK~~~R~~~~~L~~ae~L~~la~~ 75 (84)
T 1o7d_B 2 RVNVLYSTPACYLWELNKANLSWSVKKDDFFPYADGPYMFWTGYFSSRPALKRYERLSYNFLQVCNQLEALAGP 75 (84)
T ss_dssp CEEEEECCHHHHHHHHHHTCCCBCEECSCCCSCCSBTTBCSCGGGTSCHHHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred EEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 37899679999999999747888655877003567999750454207799999999979999999999998744
No 10
>3n98_A Alpha-amylase, GH57 family; GH57 family member, branching enzyme, transferase; HET: BGC PG4; 1.87A {Thermococcus kodakarensis} PDB: 3n92_A* 3n8t_A*
Probab=1.00 E-value=1 Score=89.84 Aligned_cols=299 Identities=13% Similarity=0.137 Sum_probs=163.2
Q ss_pred HHCCCHHHHHHHHHHHHCCCEEEECCEEEEECCCCCC-HHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCH------
Q ss_conf 8417979999999999879879983134110248999-688999999999999987299973015618898865------
Q 001813 101 WRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPH-YIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSA------ 173 (1010)
Q Consensus 101 ~~~~~p~~~~~vk~LV~~GrlE~vgggwv~~Dea~~~-~esiIrql~~G~~~l~~~fG~~p~v~w~~D~FGhs~------ 173 (1010)
|....++....+|+|++.|++|++++++.-+--.+.. -+++..|+..|.+.+++.||..|+..|+|.. +++.
T Consensus 116 ~~~~~~dii~~fr~L~~~G~iElit~~~tH~~lPLl~~~e~~~~QI~~g~~~~~~~FG~~P~G~WlpE~-ay~~~~~~~~ 194 (562)
T 3n98_A 116 WKAINGDIIGKLRELQDQGYVEVITSAATHGYLPLLGRDEAIRAQIANGVATYEKHFGMKPKGIWLPEC-AYRPAGEWEL 194 (562)
T ss_dssp HHHTTTCHHHHHHHHHHTTSEEEEEECTTCBCGGGCSCHHHHHHHHHHHHHHHHHHHSSCCSBEECGGG-CBCCSEEEEC
T ss_pred HHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCC-CEECCCCCCC
T ss_conf 999655799999999987998997577354686557998999999999999999980999998989313-1307644556
Q ss_pred ---------HHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCCEEEEEEECCC----------CCCCCCEEEEECC-----
Q ss_conf ---------6689998634993899950387769974205940599951799----------9998722575288-----
Q 001813 174 ---------VQAYLLSAEVGFDFLFFARIDYQDRAKRINEKTLEVVWRASKS----------LGSSAQIMTGISP----- 229 (1010)
Q Consensus 174 ---------~~p~ll~~~~G~~~~~~~Ri~~~~~~~~~~~~~~eF~W~~~d~----------~~~gs~i~t~~~~----- 229 (1010)
.+..+| +++||+++++---.-.....++.. =.|.+..+ .|++-.||.--..
T Consensus 195 ~~~~~~~~~~i~~~L-~~~Gi~y~~vd~~~~~~~~~~p~~----g~~~Pv~~~~~~~~pY~~~g~~i~vf~RD~~lS~~V 269 (562)
T 3n98_A 195 PGGRKVKRQGIEKFL-EEFGLRYFFVESRLIDEGPASNVY----GEVLIADTEKTTLRPYWIKGSNVAVFARNRETGHQV 269 (562)
T ss_dssp GGGCEEEECCHHHHH-HTTTCCEEEECHHHHHCCCCCSST----TCCCCCCCSSCSSSCEEETTSSCEEEECCHHHHHHH
T ss_pred CCCCCCCHHHHHHHH-HHCCCEEEEECCHHHCCCCCCCCC----CCCCCCCCCCCCCCCEECCCCCEEEEECCHHHHHHH
T ss_conf 654222131199999-985995999884675157888887----754665555444553123798379997375661331
Q ss_pred ----CCCCC-C----------CCCCCCCCCCC-CCCCCCCCCCCCCC-------HHHHHHHHHHHHHHHHH-----HCCC
Q ss_conf ----99799-9----------98976334889-99733796666899-------67899999999999720-----0399
Q 001813 230 ----KNYEP-P----------SDNFYFEVGDT-SPIVQDDMNLFDYN-------VPERVNDFVSAAIAQAN-----ITRT 281 (1010)
Q Consensus 230 ----~~Y~~-p----------~~~f~f~~~~~-~~~~~~~~~~~~~n-------v~~~~~~~~~~~~~~~~-----~~~t 281 (1010)
.||-. | ..||.|-+... ..+. ++ -.-|+ +.+.++.|+...+++.. ..+.
T Consensus 270 WS~~~GYPGd~~YRef~rd~~~~Gfky~ritg~~~~l-~~--K~pYdP~~A~~~~~~hA~~Fv~~~~~~~~~~~~~~~~~ 346 (562)
T 3n98_A 270 WSAHYGYPGDFWYREFHKKAPKSGGQYWRITSKEVGL-GE--KEFYDPDKAMERVEEHARHFVSLVERLLREHEEKFGEK 346 (562)
T ss_dssp HCTTTSGGGCTTSBCSSCCCTTTCCCCBBCCSSSSCG-GG--CCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred CCCCCCCCCCHHHHHHCCCCCCCCEEEECCCCCCCCC-CC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 4554588997267664012332570464146766775-55--78789899999999999999999999999887325899
Q ss_pred CEEEEEECCC---CCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCC--CCCCCCCCCCCCCCCCCCCCE
Q ss_conf 8089960579---87731478899999999998508973699769132499988439--999875578743554588731
Q 001813 282 NHIMWTMGTD---FKYQYAHTWFRQMDKFIHYVNQDGRVNALYSTPSMYIDAKYAAN--ESWPLKTDDFFPYADRENAYW 356 (1010)
Q Consensus 282 ~~il~~~G~D---f~y~~a~~~f~~~~~li~~~N~~~~~~i~~sT~~~Yf~a~~~~~--~~~p~~~gDf~py~~~~~~yW 356 (1010)
+.|.+++-.. +.+..+..| +..+++.+.+ -.++..|+++|++...... ..++. +-+- ..+.++.|
T Consensus 347 ~lvv~~~D~ElfGHwW~EG~~f---L~~l~r~l~~---~~i~~~T~se~L~~~~~~~~~~~~~~--sSWg--~~g~~~~W 416 (562)
T 3n98_A 347 GIIVAPYDTELFGHWWFEGVKW---LGRVLELLYQ---RGVETPTLSRFLEEYSGEKHEIELPE--GSWG--ANSDHSTW 416 (562)
T ss_dssp CEEEEEEEGGGBTTTBTTHHHH---HHHHHHHHHH---TTEECCCHHHHHHTCCSCCEEECCCS--BCSS--GGGSSTTT
T ss_pred CEEEEEECHHHCCCCCCHHHHH---HHHHHHHHHH---CCEEEECHHHHHHHCCCCCCCCCCCC--CCCC--CCCCCCCC
T ss_conf 8799986546527685402999---9999998755---78599779999985799775148899--8887--99984858
Q ss_pred EEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCC---C--CCCCCHHHHHHHHHHHHCCCC--C--CCCCCHHHHHHHHH
Q ss_conf 254203200357999754999999886651023---4--679735899999985502456--5--67653112889999
Q 001813 357 TGYFTSRPALKGYVRTMSAYYLAARQLEFFKGR---N--EVGLSTDSLADALALVQHHDA--V--SGTEKQHVADDYAK 426 (1010)
Q Consensus 357 tG~~TSR~~~K~~~R~~e~~L~~ae~l~~l~~~---~--~~~~~~~~lw~~l~~~QhHDa--I--tGTs~~~V~~dy~~ 426 (1010)
.|--... +=....++ .+.|..++.. . .....++.+++.|++.|--|. + +||..+...+-+..
T Consensus 417 lg~~~~w--~~~~l~~A------~~~m~~l~~~~~~~~~~~~r~L~Qa~RELLLAqsSDW~f~~~~~t~~~YA~~R~~~ 487 (562)
T 3n98_A 417 WNEETEW--TWPHIYRA------EDRMVAIVSRFRGRDELTNRVIEQLARELLILEASDWQFLITTGQAKEYAKRRVLI 487 (562)
T ss_dssp SSTTTTT--HHHHHHHH------HHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTBHHHHHHHHHTSSHHHHHHHHHH
T ss_pred CCCHHHH--HHHHHHHH------HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHH
T ss_conf 8977999--99999999------99999998632666521099999999999999968018873799827899999999
Done!