Your job contains 1 sequence.
>001817
MPFSFIFIRSGTTMTMALRPTSLNFYRAPKALLKPSPLSLLVVKNQAVAFRLLHHYHYHL
PFHLSRRRHAVVTCSGAVTRTRRLDWKAVSYPLLEQQTSNYGRYAYQDESSDDSDREFGS
TQQQMCGSTLDNIDEWRWKLTMLLRNKDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQY
AKVVVFSKAPLPNYRSDLDEKRPQREVILPFGLLREVDAHLKAYLSQKYINASMSSLSNV
GSTTNDEGLYEQQEQLVQNSVVRERILRQRSLQMHEKQQAWQESPEGQKMLEFRRSLPSY
KERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRRISAM
AVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGILLRRLLVDRSLRGVTHVIV
DEIHERGMNEDFLLIVLKELLPRRPELRLILMSATLNAELFSSYFGGAPMLHIPGFTYPV
RAYFLENILEMTRYRLNTYNQIDDYGQEKSWKMQKQALALRKRKSSIASAVEDALEAADF
REYSVQTQQSLSCWNPDSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQLQAH
PLLGDPSRVLLLACHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCG
KAKETSYDALNNTPCLLPSWISKAAARQRRGRAGRVQPGECYHLYPRYVYDAFADYQLPE
LLRTPLQSLCLQIKSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLG
RNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSA
RDYSDHLALVRAYDGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVD
RNTENCNKWSHDEHLIRAVICAGLFPGLCSVVNKEKSIALKTMEDGQVLLYSNSVNAGVP
KIPYPWLVFNEKIKVNSVFLRDSTGVSDSVLLLFGGNISRGGLVSCLIP
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001817
(1009 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2008144 - symbol:AT1G48650 species:3702 "Arabi... 3654 0. 1
TAIR|locus:2038796 - symbol:AT2G01130 species:3702 "Arabi... 3025 2.1e-315 1
TAIR|locus:504954904 - symbol:ABO6 "ABA overly sensitive ... 3017 1.5e-314 1
TAIR|locus:2039280 - symbol:AT2G35920 species:3702 "Arabi... 2019 8.3e-209 1
UNIPROTKB|F6V8H1 - symbol:DHX36 "Uncharacterized protein"... 1478 1.8e-151 1
MGI|MGI:1919412 - symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) bo... 1477 2.3e-151 1
RGD|1308767 - symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box po... 1474 4.7e-151 1
UNIPROTKB|Q9H2U1 - symbol:DHX36 "Probable ATP-dependent R... 1457 3.0e-149 1
UNIPROTKB|Q05B79 - symbol:DHX36 "Uncharacterized protein"... 1450 1.6e-148 1
UNIPROTKB|E1C550 - symbol:DHX36 "Uncharacterized protein"... 1444 7.1e-148 1
ZFIN|ZDB-GENE-050419-20 - symbol:si:dkey-119o24.1 "si:dke... 1435 6.4e-147 1
UNIPROTKB|E2QTL7 - symbol:DHX36 "Uncharacterized protein"... 1429 2.8e-146 1
UNIPROTKB|F5GZS0 - symbol:DHX36 "Probable ATP-dependent R... 1421 1.9e-145 1
UNIPROTKB|E7EWK3 - symbol:DHX36 "Probable ATP-dependent R... 1373 2.4e-140 1
TAIR|locus:2196265 - symbol:AT1G58060 species:3702 "Arabi... 789 5.3e-136 3
ZFIN|ZDB-GENE-030131-4078 - symbol:dhx57 "DEAH (Asp-Glu-A... 703 5.1e-135 4
TAIR|locus:2052841 - symbol:HVT1 "helicase in vascular ti... 787 3.7e-129 2
UNIPROTKB|E1C9G0 - symbol:DHX57 "Uncharacterized protein"... 668 6.2e-129 5
UNIPROTKB|E2QX71 - symbol:DHX57 "Uncharacterized protein"... 660 4.1e-128 4
UNIPROTKB|F1N1A2 - symbol:DHX57 "Uncharacterized protein"... 652 7.3e-127 4
UNIPROTKB|Q6P158 - symbol:DHX57 "Putative ATP-dependent R... 670 5.6e-125 3
TAIR|locus:2009200 - symbol:NIH "nuclear DEIH-boxhelicase... 746 7.6e-124 2
UNIPROTKB|F1M8G5 - symbol:Dhx57 "Protein Dhx57" species:1... 669 9.2e-124 3
UNIPROTKB|F1LSC4 - symbol:Dhx57 "Protein Dhx57" species:1... 669 1.3e-123 3
MGI|MGI:2145374 - symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) bo... 1194 1.5e-123 2
MGI|MGI:2147067 - symbol:Dhx57 "DEAH (Asp-Glu-Ala-Asp/His... 668 9.8e-123 3
RGD|2318361 - symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box po... 1185 3.5e-122 2
UNIPROTKB|E1C388 - symbol:DHX29 "Uncharacterized protein"... 1161 1.4e-120 2
UNIPROTKB|E1B9N7 - symbol:DHX29 "Uncharacterized protein"... 1182 4.1e-120 1
UNIPROTKB|E2RID8 - symbol:DHX29 "Uncharacterized protein"... 1177 1.4e-119 1
UNIPROTKB|Q7Z478 - symbol:DHX29 "ATP-dependent RNA helica... 1174 2.9e-119 1
FB|FBgn0002774 - symbol:mle "maleless" species:7227 "Dros... 1170 7.7e-119 1
TAIR|locus:2196255 - symbol:AT1G58050 species:3702 "Arabi... 1007 5.4e-118 3
UNIPROTKB|J9PAM3 - symbol:YTHDC2 "Uncharacterized protein... 698 2.5e-113 2
MGI|MGI:2448561 - symbol:Ythdc2 "YTH domain containing 2"... 707 8.8e-113 2
UNIPROTKB|F1MNU7 - symbol:YTHDC2 "Uncharacterized protein... 707 1.7e-112 2
UNIPROTKB|Q9H6S0 - symbol:YTHDC2 "Probable ATP-dependent ... 704 4.6e-112 2
UNIPROTKB|F1NS70 - symbol:YTHDC2 "Uncharacterized protein... 690 5.9e-112 2
FB|FBgn0032883 - symbol:CG9323 species:7227 "Drosophila m... 1095 6.8e-111 1
UNIPROTKB|E2QZR7 - symbol:YTHDC2 "Uncharacterized protein... 696 9.0e-111 2
DICTYBASE|DDB_G0267516 - symbol:dhx57 "RWD domain-contain... 962 1.3e-110 4
UNIPROTKB|J9P3P6 - symbol:DHX30 "Uncharacterized protein"... 661 3.4e-109 2
UNIPROTKB|F1N0J0 - symbol:DHX30 "Putative ATP-dependent R... 668 3.7e-109 2
UNIPROTKB|J9P264 - symbol:DHX30 "Uncharacterized protein"... 661 6.2e-109 2
UNIPROTKB|E2RL62 - symbol:DHX30 "Uncharacterized protein"... 661 6.3e-109 2
RGD|1308888 - symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box po... 660 1.2e-108 2
UNIPROTKB|Q5BJS0 - symbol:Dhx30 "Putative ATP-dependent R... 660 1.2e-108 2
UNIPROTKB|F1SLI4 - symbol:DHX30 "Uncharacterized protein"... 664 1.3e-108 2
MGI|MGI:1920081 - symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) bo... 660 1.4e-108 2
UNIPROTKB|D4A1V3 - symbol:Dhx30 "Putative ATP-dependent R... 660 1.5e-108 2
UNIPROTKB|Q2NKY8 - symbol:DHX30 "Putative ATP-dependent R... 668 2.0e-108 2
RGD|1308548 - symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box pol... 663 3.7e-108 2
UNIPROTKB|H7BXY3 - symbol:DHX30 "Putative ATP-dependent R... 662 4.7e-108 2
UNIPROTKB|Q5ZI74 - symbol:DHX30 "Putative ATP-dependent R... 651 5.5e-108 2
UNIPROTKB|Q7L2E3 - symbol:DHX30 "Putative ATP-dependent R... 662 5.7e-108 2
UNIPROTKB|Q5R607 - symbol:DHX30 "Putative ATP-dependent R... 660 1.1e-107 2
UNIPROTKB|G4MR96 - symbol:MGG_04709 "Uncharacterized prot... 1052 2.1e-107 2
MGI|MGI:108177 - symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box ... 662 2.4e-107 2
UNIPROTKB|F1P1F4 - symbol:DHX30 "Putative ATP-dependent R... 651 3.0e-107 2
UNIPROTKB|G5E5N3 - symbol:DHX9 "ATP-dependent RNA helicas... 662 5.4e-107 2
UNIPROTKB|Q28141 - symbol:DHX9 "ATP-dependent RNA helicas... 662 5.4e-107 2
UNIPROTKB|Q5R874 - symbol:DHX9 "ATP-dependent RNA helicas... 657 5.4e-107 2
UNIPROTKB|Q08211 - symbol:DHX9 "ATP-dependent RNA helicas... 657 5.4e-107 2
UNIPROTKB|F1SLN0 - symbol:DHX29 "Uncharacterized protein"... 1038 9.2e-107 2
UNIPROTKB|Q68FK8 - symbol:dhx9 "ATP-dependent RNA helicas... 660 1.5e-106 2
UNIPROTKB|E2RNT3 - symbol:DHX9 "Uncharacterized protein" ... 656 2.5e-106 2
ZFIN|ZDB-GENE-070912-171 - symbol:dhx9 "DEAH (Asp-Glu-Ala... 674 3.2e-106 2
UNIPROTKB|J9P6V4 - symbol:DHX29 "Uncharacterized protein"... 1047 8.3e-106 1
UNIPROTKB|I3LHZ6 - symbol:DHX9 "Uncharacterized protein" ... 641 6.4e-105 2
UNIPROTKB|I3LQ47 - symbol:DHX29 "Uncharacterized protein"... 1015 2.5e-104 2
DICTYBASE|DDB_G0275313 - symbol:dhx9 "ATP-dependent RNA h... 546 5.4e-104 4
UNIPROTKB|I3LG95 - symbol:DHX29 "Uncharacterized protein"... 1010 8.3e-104 2
WB|WBGene00004355 - symbol:rha-1 species:6239 "Caenorhabd... 972 7.4e-98 1
ASPGD|ASPL0000008624 - symbol:AN5839 species:162425 "Emer... 967 9.4e-97 1
FB|FBgn0030246 - symbol:CG1582 species:7227 "Drosophila m... 844 1.8e-94 3
POMBASE|SPBC15C4.05 - symbol:SPBC15C4.05 "ATP-dependent R... 904 7.2e-90 1
UNIPROTKB|G4MZR9 - symbol:MGG_07059 "Pre-mRNA-splicing fa... 564 2.2e-88 3
CGD|CAL0005664 - symbol:orf19.6818 species:5476 "Candida ... 569 1.8e-85 4
UNIPROTKB|Q5ADM3 - symbol:CaO19.14110 "Putative uncharact... 569 1.8e-85 4
UNIPROTKB|F1RLG0 - symbol:YTHDC2 "Uncharacterized protein... 708 3.3e-85 2
UNIPROTKB|H7C109 - symbol:DHX57 "Putative ATP-dependent R... 704 1.7e-84 2
ZFIN|ZDB-GENE-061207-30 - symbol:dhx34 "DEAH (Asp-Glu-Ala... 549 1.2e-82 3
POMBASE|SPBC16H5.10c - symbol:prp43 "ATP-dependent RNA he... 507 1.8e-82 2
WB|WBGene00009922 - symbol:F52B5.3 species:6239 "Caenorha... 445 7.2e-82 3
FB|FBgn0086895 - symbol:pea "peanuts" species:7227 "Droso... 545 6.1e-81 2
MGI|MGI:1918973 - symbol:Dhx34 "DEAH (Asp-Glu-Ala-His) bo... 547 3.4e-80 2
FB|FBgn0030833 - symbol:CG8915 species:7227 "Drosophila m... 486 1.1e-79 2
UNIPROTKB|Q14147 - symbol:DHX34 "Probable ATP-dependent R... 537 1.8e-79 2
WB|WBGene00003393 - symbol:mog-5 species:6239 "Caenorhabd... 539 3.2e-79 3
UNIPROTKB|Q09530 - symbol:mog-5 "Probable pre-mRNA-splici... 539 3.2e-79 3
UNIPROTKB|E2RTK4 - symbol:DHX34 "Uncharacterized protein"... 531 5.1e-79 2
UNIPROTKB|E2RTK2 - symbol:DHX34 "Uncharacterized protein"... 531 6.1e-79 2
UNIPROTKB|E1BJ90 - symbol:DHX34 "Uncharacterized protein"... 525 1.2e-78 2
TAIR|locus:2033723 - symbol:ESP3 "ENHANCED SILENCING PHEN... 493 1.6e-78 2
RGD|1310723 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box pol... 534 3.1e-77 3
UNIPROTKB|D4A805 - symbol:Dhx8 "Protein Dhx8" species:101... 534 3.7e-77 3
MGI|MGI:1306823 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box... 534 4.8e-77 3
UNIPROTKB|Q14562 - symbol:DHX8 "ATP-dependent RNA helicas... 534 5.3e-77 3
SGD|S000003088 - symbol:PRP43 "RNA helicase in the DEAH-b... 475 5.7e-77 2
ZFIN|ZDB-GENE-050809-39 - symbol:dhx8 "DEAH (Asp-Glu-Ala-... 531 6.9e-77 3
WARNING: Descriptions of 215 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2008144 [details] [associations]
symbol:AT1G48650 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
EMBL:CP002684 GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14442
IPI:IPI00938568 RefSeq:NP_001154411.1 UniGene:At.22775
ProteinModelPortal:F4HYJ6 SMR:F4HYJ6 PRIDE:F4HYJ6
EnsemblPlants:AT1G48650.2 GeneID:841287 KEGG:ath:AT1G48650
OMA:GRIAYND Uniprot:F4HYJ6
Length = 1206
Score = 3654 (1291.3 bits), Expect = 0., P = 0.
Identities = 704/929 (75%), Positives = 798/929 (85%)
Query: 77 AVTRTRRLDWKAVSYPLLEQQTSNYGRYAYQD-ESSDDSDREFGSTQ-QQMCGSTLDNID 134
A + T ++W+A + P ++Q S YGR AY D ESSD+SDR+ GS+Q QQM GSTLDNID
Sbjct: 76 ASSSTLGIEWRAANLPYFQRQNSGYGRIAYNDYESSDESDRDVGSSQSQQMAGSTLDNID 135
Query: 135 EWRWKLTMLLRNKDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNY 194
+WR+KLTMLLRNK++QEVVSR +KDRRDF+ +SALATRMGLHSRQY+K+VV SKAPLPNY
Sbjct: 136 QWRFKLTMLLRNKEDQEVVSRERKDRRDFDHISALATRMGLHSRQYSKIVVISKAPLPNY 195
Query: 195 RSDLDEKRPQREVILPFGLLREVDAHLKAYLSQKY-INASMSSLSNVGSTTNDEGLYEQQ 253
R DLD+KRPQREV+LPFGL EVDAHL ++L QK + M ++ S N G YE
Sbjct: 196 RPDLDDKRPQREVVLPFGLQSEVDAHLHSFLDQKKTLIPEMPRQNSSESLANGYGNYETP 255
Query: 254 EQLVQNSVVRERILRQRSLQMHEKQQAWQESPEGQKMLEFRRSLPSYKERDALLKAISEN 313
E ++QNS+ RERILR RSLQ+ KQQ W +SPEGQKM+ FR++LP+YKE+DALLKAI+ N
Sbjct: 256 ETVMQNSLARERILRPRSLQLKSKQQQWVDSPEGQKMVGFRKTLPAYKEKDALLKAIAAN 315
Query: 314 QVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEK 373
QVVVVSGETGCGKTTQLPQYILESE EAARGA CSIICTQPRRISA++VSERVAAERGE+
Sbjct: 316 QVVVVSGETGCGKTTQLPQYILESEIEAARGATCSIICTQPRRISAISVSERVAAERGEQ 375
Query: 374 LGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFL 433
+GESVGYKVRLEGM+GRDTRL+FCTTG+ GVTHV+VDEIHERGMNEDFL
Sbjct: 376 IGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLKGVTHVVVDEIHERGMNEDFL 435
Query: 434 LIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYFLENILEMTR 493
LIV MSATLNAELFSSYFGGAP +HIPGFTYPVRA+FLE+ LE +
Sbjct: 436 LIVLKDLLPRRPDLKLILMSATLNAELFSSYFGGAPAMHIPGFTYPVRAHFLEDYLETSG 495
Query: 494 YRLNTYNQIDDYGQEKSWKMQKQALALRKRKSSIASAVEDALEAADFREYSVQTQQSLSC 553
YRL TYNQIDDYG+EK+WKMQKQA +KRKS I+SAVEDALEAADF+ Y+ +T+ SLSC
Sbjct: 496 YRLTTYNQIDDYGEEKTWKMQKQA-QFKKRKSLISSAVEDALEAADFKGYNFRTRDSLSC 554
Query: 554 WNPDSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQLQAHPLLGDPSRVLLLA 613
W+PDSIGFNLIE+VLCHIVK ERPGAVLVFMTGWDDINSLK+QL+AH LLGDP++VLLLA
Sbjct: 555 WSPDSIGFNLIENVLCHIVKGERPGAVLVFMTGWDDINSLKNQLEAHSLLGDPNKVLLLA 614
Query: 614 CHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNT 673
CHGSMASSEQRLIFD+P +G+RKIVLATNMAETSITINDVV+VIDCGKAKETSYDALNNT
Sbjct: 615 CHGSMASSEQRLIFDRPPEGIRKIVLATNMAETSITINDVVYVIDCGKAKETSYDALNNT 674
Query: 674 PCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQI 733
PCLLPSWISK V PGECYHLYPR VY+AFADYQ PELLRTPLQSLCLQI
Sbjct: 675 PCLLPSWISKAAARQRRGRAGRVMPGECYHLYPRCVYEAFADYQQPELLRTPLQSLCLQI 734
Query: 734 KSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLG 793
KSL LGSISEFLSRALQPPE LSV+NA+EYL+IIGALD++ENLT LG+NLSMLPVEPKLG
Sbjct: 735 KSLGLGSISEFLSRALQPPEALSVQNAVEYLKIIGALDDDENLTPLGKNLSMLPVEPKLG 794
Query: 794 KMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAY 853
KMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAE+A+++FS RDYSDHL LVRAY
Sbjct: 795 KMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAETARSKFSGRDYSDHLTLVRAY 854
Query: 854 DGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDE 913
+GWKDAER SGY+YCWKNFLS+QTLKA+DS+RKQF LLK+A L+D N E C+K SHDE
Sbjct: 855 NGWKDAERTHSGYDYCWKNFLSSQTLKAMDSMRKQFFNLLKEASLID-NIEGCSKLSHDE 913
Query: 914 HLIRAVICAGLFPGLCSVVNKEKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFNEKI 973
HL+RA+ICAG+FPG+CSVVNKEKSI LKTMEDGQVLLYS+SVN VP IP+PWLVFN+K+
Sbjct: 914 HLVRAIICAGMFPGVCSVVNKEKSITLKTMEDGQVLLYSSSVNGNVPMIPFPWLVFNDKV 973
Query: 974 KVNSVFLRDSTGVSDSVLLLFGGNISRGG 1002
KVNSVFLRDST VSDSVLLLFG IS GG
Sbjct: 974 KVNSVFLRDSTAVSDSVLLLFGDKISSGG 1002
>TAIR|locus:2038796 [details] [associations]
symbol:AT2G01130 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002685 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14442 IPI:IPI00528464
RefSeq:NP_178223.2 UniGene:At.42514 ProteinModelPortal:F4IM84
SMR:F4IM84 PRIDE:F4IM84 EnsemblPlants:AT2G01130.1 GeneID:814642
KEGG:ath:AT2G01130 OMA:PSWISKV Uniprot:F4IM84
Length = 1113
Score = 3025 (1069.9 bits), Expect = 2.1e-315, P = 2.1e-315
Identities = 595/904 (65%), Positives = 714/904 (78%)
Query: 103 RY--AYQDESSDDSDREFGSTQQQMCGSTLDNIDEWRWKLTMLLRNKDEQEVVSRAKKDR 160
RY AY D S+D + G+ C ++D+W + +MLL++ +QEV+SR KKDR
Sbjct: 32 RYVSAYDDRVSEDRQPQEGTFH---CA----DLDDWNKRFSMLLKDSLKQEVISREKKDR 84
Query: 161 RDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNYRSDLDEKRPQREVILPFGLLREVDAH 220
RDF++L+ALAT +GL+S YAKVVVFSK PLPNYR DLD+K+PQREV L LL+ V+A+
Sbjct: 85 RDFDKLAALATTLGLYSHAYAKVVVFSKIPLPNYRFDLDDKKPQREVNLHTDLLQRVEAY 144
Query: 221 LKAYLSQ---KYINASMSSLSNVGSTTNDEGLYEQQEQLVQNSVVRERILRQRSLQMHEK 277
L YLS+ + +S+S S ++ + + +Q + + +IL QRSLQ+ ++
Sbjct: 145 LTEYLSKSSNRIDRVPANSVSRTSSISSTDEWFSEQPLPISAT----KILWQRSLQLRDR 200
Query: 278 QQAWQESPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILES 337
QQ WQ S EGQ+ML+ R SLP++K+R ++L AIS+NQV+V+SGETGCGKTTQ+PQ+ILES
Sbjct: 201 QQYWQASVEGQRMLDSRTSLPAFKQRHSVLTAISQNQVIVISGETGCGKTTQIPQFILES 260
Query: 338 ETEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFC 397
E EA RGA SIICTQPRRISAM+VSERVA ERGE+LGESVGYKVRLEG+KGRDTRL+FC
Sbjct: 261 EIEANRGAFSSIICTQPRRISAMSVSERVAYERGEQLGESVGYKVRLEGVKGRDTRLLFC 320
Query: 398 TTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLN 457
TTGI GVTHVIVDEIHERGMNEDFLLI+ MSATL+
Sbjct: 321 TTGILLRRLLVDRNLRGVTHVIVDEIHERGMNEDFLLIILKDLLSRRSELKLILMSATLD 380
Query: 458 AELFSSYFGGAPMLHIPGFTYPVRAYFLENILEMTRYRLNTYNQIDDYGQEKSWKMQKQA 517
AELFSSYFGGA +++IPGFTYPVR++FLE+ILEMTRYRL YNQIDDYGQE++WKM KQ
Sbjct: 381 AELFSSYFGGAGVIYIPGFTYPVRSHFLEDILEMTRYRLTPYNQIDDYGQERTWKMNKQI 440
Query: 518 LALRKRKSSIASAVEDALEAADFREYSVQTQQSLSCWNPDSIGFNLIEHVLCHIVKKERP 577
+KRKS I VEDAL AADF+E+S +T++SLSCW PD IGFNLIE +LC+I + E P
Sbjct: 441 P--KKRKSQITFVVEDALRAADFKEFSPETRESLSCWYPDCIGFNLIEFLLCNICENEGP 498
Query: 578 GAVLVFMTGWDDINSLKDQLQAHPLLGDPSRVLLLACHGSMASSEQRLIFDKPEDGVRKI 637
G +L+F+TGWDDI+SLK++LQ HP+ G+P V+LLACHGSM + EQRLIF++P GVRKI
Sbjct: 499 GGILIFLTGWDDISSLKEKLQIHPIFGNPDLVMLLACHGSMETFEQRLIFEEPASGVRKI 558
Query: 638 VLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXXXVQ 697
VLATN+AETSITINDV FVIDCGKAKETSYDALNNTPCLLPSWISK V+
Sbjct: 559 VLATNIAETSITINDVAFVIDCGKAKETSYDALNNTPCLLPSWISKVSAQQRRGRAGRVR 618
Query: 698 PGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPEPLSV 757
PG+CYHLYP+ VYDAFA+YQLPE+LRTPL SLCLQIKSL LGSISEFLSRALQ PE L+V
Sbjct: 619 PGQCYHLYPKCVYDAFAEYQLPEILRTPLHSLCLQIKSLNLGSISEFLSRALQSPELLAV 678
Query: 758 KNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSV 817
+ AI +L+IIGALDENE+LT LGR LS LP+EPKLGKMLILGAI CLDP++TV AGLSV
Sbjct: 679 QKAIAFLKIIGALDENEDLTTLGRYLSKLPMEPKLGKMLILGAILGCLDPILTVAAGLSV 738
Query: 818 RDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYEYCWKNFLSAQ 877
RDPFL P DKKDLAE+AK+QFS RD+SDHLALVRAY+GWK AE + Y+YCWKNFLS Q
Sbjct: 739 RDPFLTPQDKKDLAEAAKSQFS-RDHSDHLALVRAYEGWKKAEEESAVYDYCWKNFLSIQ 797
Query: 878 TLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDEHLIRAVICAGLFPGLCSVVNKEKS 937
+L+AIDSLRK+F LLKD GL+D N CN +D +L RAVIC G++PG+CSVV+ E+S
Sbjct: 798 SLRAIDSLRKEFFSLLKDTGLIDGNPSICNSEGNDANLTRAVICYGMYPGICSVVHNERS 857
Query: 938 IALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVSDSVLLLFGGN 997
+LKTMEDGQVLLYSNS NA KIPYPWLVFNEKIKVNSVFLRDST SDS L+LFGG+
Sbjct: 858 FSLKTMEDGQVLLYSNSENARETKIPYPWLVFNEKIKVNSVFLRDSTACSDSTLILFGGS 917
Query: 998 ISRG 1001
IS+G
Sbjct: 918 ISKG 921
>TAIR|locus:504954904 [details] [associations]
symbol:ABO6 "ABA overly sensitive 6" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA;ISS] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 EMBL:AB005245 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 EMBL:AB008271 HOGENOM:HOG000247063
KO:K14442 EMBL:AB025625 IPI:IPI00533344 RefSeq:NP_680142.2
UniGene:At.45659 ProteinModelPortal:Q9FF84 SMR:Q9FF84 PaxDb:Q9FF84
PRIDE:Q9FF84 EnsemblPlants:AT5G04895.1 GeneID:830371
KEGG:ath:AT5G04895 TAIR:At5g04895 InParanoid:Q9FF84 OMA:MRAGHSP
PhylomeDB:Q9FF84 ProtClustDB:CLSN2680421 Genevestigator:Q9FF84
Uniprot:Q9FF84
Length = 1161
Score = 3017 (1067.1 bits), Expect = 1.5e-314, P = 1.5e-314
Identities = 572/894 (63%), Positives = 716/894 (80%)
Query: 110 SSDDSDREFGSTQQQMCGSTLDNIDEWRWKLTMLLRNKDEQEVVSRAKKDRRDFEQLSAL 169
S D+ + EF ++ S++ N+DEW+WKL +LL N EQE+VSR K+DRRD+EQ+S L
Sbjct: 74 SDDEYECEF---EEHKASSSVANVDEWKWKLGILLANDSEQEIVSRDKRDRRDYEQISNL 130
Query: 170 ATRMGLHSRQYAKVVVFSKAPLPNYRSDLDEKRPQREVILPFGLLREVDAHLKAYLSQKY 229
A RMGL+S Y KVVV SK PLPNYR DLD+KRPQREV+LP L R V+ L+ +L +
Sbjct: 131 AKRMGLYSEIYGKVVVASKVPLPNYRPDLDDKRPQREVVLPLSLQRRVEGLLQEHLDSQQ 190
Query: 230 INASMSS--LSNVGSTTNDEGLYEQQEQLVQNSVVRERILRQRSLQMHEKQQAWQESPEG 287
+++ ++ +++ E L ++ + V E++L++RS++M Q+ WQESPEG
Sbjct: 191 LSSGKANECVADSQPPKQTEELPDENSDSFLDGSVMEKVLQRRSMRMRNMQRTWQESPEG 250
Query: 288 QKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAAC 347
+ MLEFR++LPS+K+++ LL+AI+ NQV+VVSGETGCGKTTQLPQYILESE E+ RGA C
Sbjct: 251 RTMLEFRKTLPSFKDKERLLQAIARNQVIVVSGETGCGKTTQLPQYILESEIESGRGAFC 310
Query: 348 SIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXX 407
+IICTQPRRISAMAVSERV+AERGE LGE+VG+KVRLEGM+G++T L+FCT+GI
Sbjct: 311 NIICTQPRRISAMAVSERVSAERGEPLGETVGFKVRLEGMRGKNTHLLFCTSGILLRRLL 370
Query: 408 XXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGG 467
GVTHV VDEIHERGMNEDFL+IV MSATLNAELFS+Y+GG
Sbjct: 371 SDRNLNGVTHVFVDEIHERGMNEDFLIIVLKELLPRRPDLRLVLMSATLNAELFSNYYGG 430
Query: 468 APMLHIPGFTYPVRAYFLENILEMTRYRLNTYNQIDDYGQEKSWKMQKQALALRKRKSSI 527
AP +HIPGFT+PV+A+FLE++LE+T Y+L ++NQ+DDYGQEK+WK QKQ + RKRK+ I
Sbjct: 431 APTIHIPGFTHPVKAHFLEDVLEITGYKLTSFNQVDDYGQEKTWKTQKQLMP-RKRKNQI 489
Query: 528 ASAVEDALEAADFREYSVQTQQSLSCWNPDSIGFNLIEHVLCHIVKKERPGAVLVFMTGW 587
+ VE+AL ++F Y+ +T+ SLS W PD IGFNLIE VLCHI +KERPGAVLVF+TGW
Sbjct: 490 TTLVEEALSKSNFESYNSRTRDSLSSWMPDCIGFNLIEAVLCHICRKERPGAVLVFLTGW 549
Query: 588 DDINSLKDQLQAHPLLGDPSRVLLLACHGSMASSEQRLIFDKPEDGVRKIVLATNMAETS 647
DDI SL DQ++AHPLLGDP+RVLLL CHGSMA++EQRLIF++ +RKIVLATNMAE S
Sbjct: 550 DDIRSLSDQIKAHPLLGDPNRVLLLMCHGSMATAEQRLIFERAPPNIRKIVLATNMAEAS 609
Query: 648 ITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPR 707
ITINDVVFV+DCGKAKET+YDALNNTPCLLPSWIS+ + PGECYHLYP+
Sbjct: 610 ITINDVVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRGRAGRLFPGECYHLYPK 669
Query: 708 YVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPEPLSVKNAIEYLQII 767
VYDAFA+YQLPELLRTPL SLCLQIKSLQ+ SI+EFLS ALQ PE L+V+NAI +L++I
Sbjct: 670 CVYDAFAEYQLPELLRTPLNSLCLQIKSLQVESIAEFLSAALQAPESLAVQNAIGFLKMI 729
Query: 768 GALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDK 827
GALDE ENLT LG+ LS+LPV+PKLGKMLI+GAIF C DP++T+V+GLSVRDPFL+P DK
Sbjct: 730 GALDEKENLTDLGKLLSILPVDPKLGKMLIMGAIFRCFDPILTIVSGLSVRDPFLLPQDK 789
Query: 828 KDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRK 887
KDLA SAK +FSA+DYSDH+ALVRA++GWKDAER S YE+CW+NFLSAQTL+AI SLRK
Sbjct: 790 KDLALSAKLRFSAKDYSDHMALVRAFEGWKDAEREGSAYEFCWRNFLSAQTLQAIHSLRK 849
Query: 888 QFLFLLKDAGLVDRNTENCNKWSHDEHLIRAVICAGLFPGLCSVVNKEKSIALKTMEDGQ 947
QF ++LK+AGLV + NK SH++ L+RAVIC+GLFPG+ SVV++E S++ KTM+DGQ
Sbjct: 850 QFNYILKEAGLVHDDLALNNKLSHNQSLVRAVICSGLFPGIASVVHRETSMSFKTMDDGQ 909
Query: 948 VLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVSDSVLLLFGGNISRG 1001
V LY+NSVN+ P IPYPWLVF EK+KVN+V +RDSTGV DS L+LFGG++S G
Sbjct: 910 VSLYANSVNSRFPTIPYPWLVFGEKVKVNAVLIRDSTGVPDSSLILFGGSLSTG 963
>TAIR|locus:2039280 [details] [associations]
symbol:AT2G35920 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14442 OMA:RIRNRSY IPI:IPI00520060
RefSeq:NP_850255.1 UniGene:At.27892 ProteinModelPortal:F4ILR7
SMR:F4ILR7 PRIDE:F4ILR7 EnsemblPlants:AT2G35920.1 GeneID:818165
KEGG:ath:AT2G35920 Uniprot:F4ILR7
Length = 995
Score = 2019 (715.8 bits), Expect = 8.3e-209, P = 8.3e-209
Identities = 403/883 (45%), Positives = 579/883 (65%)
Query: 122 QQQMCGSTLDNIDEWRWKLTMLLRNKDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQY- 180
QQQ LD +EW W + EQE++ + R D + LS +A +MGL+ Y
Sbjct: 54 QQQAEMEVLDE-NEW-WNKIEQWKTGGEQEMLIKRNFSRGDQQTLSDMALQMGLYFHAYN 111
Query: 181 -AKVVVFSKAPLPNYRSDLDEKR--PQREVILPFGLLREVDAHLKAYLSQKYINASMSSL 237
K +V SK PLP+YR+DLDE+ Q+E+ + R++ + LK AS S+
Sbjct: 112 KGKALVVSKVPLPDYRADLDERHGSTQKEIKMSTETERKLGSLLKTTQESGSSGASASAF 171
Query: 238 SNVGSTTNDEGLYEQQE-QLVQNSVVRERILRQRSLQMHEKQQAWQESPEGQKMLEFRRS 296
++ T+ GL + +S+ +E+ S + E+Q+ + + + + FR
Sbjct: 172 NDQQDRTSTLGLKRPDSASKLPDSLEKEKF----SFALKERQEKLKATESVKALKAFREK 227
Query: 297 LPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRR 356
LP++K ++ L ++S+NQV+VVSGETGCGKTTQLPQ+ILE E + RGA C+IICTQPRR
Sbjct: 228 LPAFKMKEEFLNSVSQNQVLVVSGETGCGKTTQLPQFILEEEISSLRGADCNIICTQPRR 287
Query: 357 ISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXGVT 416
ISA++V+ R++AERGE +GESVGY++RLE + TRL+FCTTG+ V+
Sbjct: 288 ISAISVASRISAERGESIGESVGYQIRLESKRSDQTRLLFCTTGVLLRRLIEDPNLTNVS 347
Query: 417 HVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGF 476
H++VDEIHERGMNEDFLLI+ MSAT+NA++FS+YFG +P +HIPGF
Sbjct: 348 HLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMSATINADMFSTYFGNSPTMHIPGF 407
Query: 477 TYPVRAYFLENILEMTRYRLNTYNQIDDYGQEKSWKMQKQALALRKRKSSIASAVEDALE 536
T+PV FLE++LE +RY + + + + G + + + ++ +K + + ED
Sbjct: 408 TFPVAELFLEDVLEKSRYNIKSSDSGNYQGSSRGRRRESES-----KKDDLTTLFEDIDI 462
Query: 537 AADFREYSVQTQQSLSCWNPDSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQ 596
+ ++ YS T+ SL W+ I +L+E + HI + E GA+LVF+TGWD+I+ L ++
Sbjct: 463 NSHYKSYSSATRNSLEAWSGAQIDVDLVEATIEHICRLEGGGAILVFLTGWDEISKLLEK 522
Query: 597 LQAHPLLGDPSRVLLLACHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFV 656
+ + LGD S+ L+L HGSM + QR IFD+P RKIVLATN+AE+SITI+DVV+V
Sbjct: 523 INMNNFLGDSSKFLVLPLHGSMPTVNQREIFDRPPPNKRKIVLATNIAESSITIDDVVYV 582
Query: 657 IDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADY 716
+DCGKAKETSYDALN CLLPSWISK VQ G CY LYP+ +YDAF Y
Sbjct: 583 VDCGKAKETSYDALNKVACLLPSWISKASAHQRRGRAGRVQAGVCYRLYPKVIYDAFPQY 642
Query: 717 QLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENL 776
QLPE++RTPLQ LCL IKSLQ+GSI FL++ALQPP+ L+V+NAIE L+ IGAL++ E L
Sbjct: 643 QLPEIIRTPLQELCLHIKSLQVGSIGSFLAKALQPPDALAVENAIELLKTIGALNDVEEL 702
Query: 777 TVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKA 836
T LGR+L LPV+P +GKML++GAIF C++P +T+ A L+ R PF++P ++K+ A+ AK
Sbjct: 703 TPLGRHLCTLPVDPNIGKMLLIGAIFQCVNPALTIAAALAYRSPFVLPLNRKEEADEAKR 762
Query: 837 QFSARDYSDHLALVRAYDGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDA 896
F+ SDH+AL++AY+G++DA+R + ++CW+NFLS TL+ ++ +R QFL LL D
Sbjct: 763 YFAGDSCSDHIALLKAYEGYRDAKRGGNEKDFCWQNFLSPVTLRMMEDMRNQFLDLLSDI 822
Query: 897 GLVDRNTENC-NKWSHDEHLIRAVICAGLFPGLCSVVNKEKSIALKTMEDGQVLLYSNSV 955
G VD++ N N++S+D +I AV+CAGL+P + + K A T E G+V ++ SV
Sbjct: 823 GFVDKSKPNAYNQYSYDMEMISAVLCAGLYPNVVQCKRRGKRTAFYTKELGKVDIHPGSV 882
Query: 956 NAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVSDSVLLLFGGNI 998
NA V P+LV++EK+K SV++RDST +SD LL+FGGN+
Sbjct: 883 NARVNLFSLPYLVYSEKVKTTSVYIRDSTNISDYALLMFGGNL 925
>UNIPROTKB|F6V8H1 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RIRNRSY Ensembl:ENSCAFT00000013769
EMBL:AAEX03013695 Uniprot:F6V8H1
Length = 1122
Score = 1478 (525.3 bits), Expect = 1.8e-151, P = 1.8e-151
Identities = 328/799 (41%), Positives = 464/799 (58%)
Query: 216 EVDAHLKAYLSQKYINASMSSLSNVGST--TNDEGLYEQQEQLVQNSVVRERILRQRSLQ 273
E+ A K +K N +S T D+ + E L+Q + + L Q+ L+
Sbjct: 242 EIPAENKPNSEKKLENQEKKLISQEKRTFRIRDKYIDRDSEYLLQENEP-DVALDQQLLE 300
Query: 274 MHEKQQAWQESPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQY 333
K+++ E M FR LPSY + L+ I +QV V+SGETGCGKTTQ+ Q+
Sbjct: 301 DLRKKKSDLRYIE---MQHFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQF 357
Query: 334 ILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGE--SVGYKVRLEG-MKGR 390
IL+ E +G+AC I+CTQPRRISA++V+ERVAAER E G S GY++RL+ + +
Sbjct: 358 ILDDYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRK 417
Query: 391 DTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXX 450
+++CTTGI V+H+++DEIHER + D L+ V
Sbjct: 418 QGSILYCTTGIILQWLQSDSHLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFRPDLKVI 477
Query: 451 XMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYFLENILEMTRYRLNTYNQIDDYGQEKS 510
MSATLNAE FS YFG PM+HIPGFT+PV Y LE+I+E RY Q + Q K
Sbjct: 478 LMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRY---VPEQKEQRSQFKR 534
Query: 511 WKMQKQALALRKRKSSIASAVEDALEAADFRE-YSVQTQQSLSCWNPDSIGFNLIEHVLC 569
MQ K + + R+ YS T + + D + NLI ++
Sbjct: 535 GFMQGHVNRQEKEEKEAIYKERWPDYVRELRKRYSASTVDVMEMIDDDKVDLNLIAALIR 594
Query: 570 HIVKKERPGAVLVFMTGWDDINSLKDQLQAHPLLGDPSRVLLLACHGSMASSEQRLIFDK 629
HIV +E GA+LVF+ GWD+I++L D L + + R L++ H M + Q +F K
Sbjct: 595 HIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS-DRFLIIPLHSLMPTVNQTQVFKK 653
Query: 630 PEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXX 689
GVRKIV+ATN+AETSITI+DVV+VID GK KET +D NN + W+SK
Sbjct: 654 TPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQR 713
Query: 690 XXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRAL 749
VQPG CYHLY DYQLPE+LRTPL+ LCLQIK L+LG I+ FLSR +
Sbjct: 714 KGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLM 773
Query: 750 QPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVM 809
PP +V +I++L + ALD+ E LT LG +L+ LPVEP +GKM++ GA+F CLDPV+
Sbjct: 774 DPPSDEAVSLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVL 833
Query: 810 TVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYE-- 867
T+ A LS +DPF++P K+ +A++ + + + SDHL +V A++GW++A R YE
Sbjct: 834 TIAASLSFKDPFVIPLGKEKIADARRKELAKDTKSDHLTVVNAFEGWEEARRRGFRYEKD 893
Query: 868 YCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVD-RNTEN--CNKWSHDEHLIRAVICAGL 924
YCW+ FLS+ TL+ + +++ QF L AG V RN ++ N S +E +I+AVICAGL
Sbjct: 894 YCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPKSNINSDNEKIIKAVICAGL 953
Query: 925 FPGLCSV-VN---KEKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFL 980
+P + + +N K K + + T DG V ++ SVN + Y WL+++ K++ +S++L
Sbjct: 954 YPKVAKIRLNLGKKRKMVKVYTKTDGLVAIHPKSVNVEQTEFHYNWLIYHLKMRTSSIYL 1013
Query: 981 RDSTGVSDSVLLLFGGNIS 999
D T VS LL FGG+IS
Sbjct: 1014 YDCTEVSPYCLLFFGGDIS 1032
>MGI|MGI:1919412 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IDA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009615 "response to virus"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1919412 GO:GO:0005524 GO:GO:0005634 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0043330 EMBL:CH466530 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:AF448804 EMBL:AC114424
EMBL:AK129373 EMBL:AK013031 IPI:IPI00351266 RefSeq:NP_082412.2
UniGene:Mm.224233 ProteinModelPortal:Q8VHK9 DIP:DIP-48576N
STRING:Q8VHK9 PhosphoSite:Q8VHK9 PaxDb:Q8VHK9 PRIDE:Q8VHK9
Ensembl:ENSMUST00000029336 GeneID:72162 KEGG:mmu:72162
UCSC:uc008pjn.2 InParanoid:Q8VHK9 ChiTaRS:DHX36 NextBio:335597
CleanEx:MM_DHX36 Genevestigator:Q8VHK9
GermOnline:ENSMUSG00000027770 Uniprot:Q8VHK9
Length = 1001
Score = 1477 (525.0 bits), Expect = 2.3e-151, P = 2.3e-151
Identities = 315/744 (42%), Positives = 445/744 (59%)
Query: 271 SLQMH--EKQQAWQESPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTT 328
SL H E Q + P +M FR+ LPSY + L+ I+ +QV V+SGETGCGKTT
Sbjct: 172 SLDQHLLEDLQRKKTDPRYIEMQRFRKKLPSYGMQKELVNLINNHQVTVISGETGCGKTT 231
Query: 329 QLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGE--SVGYKVRLEG 386
Q+ Q+IL++ E +G+AC I+CTQPRRISA++V+ERVA ER E G S GY++RL+
Sbjct: 232 QVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVATERAESCGNGNSTGYQIRLQS 291
Query: 387 -MKGRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXX 445
+ + +++CTTGI V+H+++DEIHER + D L+ V
Sbjct: 292 RLPRKQGSILYCTTGIILQWLQSDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRS 351
Query: 446 XXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYFLENILEMTRYRLNTYNQIDDY 505
MSATLNAE FS YFG PM+HIPGFT+PV Y LE+I+E RY +Q +
Sbjct: 352 DLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRY---VPDQKEHR 408
Query: 506 GQEKSWKMQKQALALRKRKSSIASAVEDALEAADFR-EYSVQTQQSLSCWNPDSIGFNLI 564
Q K MQ K + + R YS T L + D + NLI
Sbjct: 409 SQFKRGFMQGHVNRQEKEEKEAIYKERWPAYIKELRTRYSASTVDVLQMMDDDKVDLNLI 468
Query: 565 EHVLCHIVKKERPGAVLVFMTGWDDINSLKDQLQAHPLLGDPSRVLLLACHGSMASSEQR 624
++ +IV +E GA+LVF+ GWD+I++L D L + + + L++ H M + Q
Sbjct: 469 AALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS-DKFLIIPLHSLMPTVNQT 527
Query: 625 LIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKX 684
+F K GVRKIV+ATN+AETSITI+DVV+VID GK KET +D NN + W+SK
Sbjct: 528 QVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKA 587
Query: 685 XXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEF 744
VQPG CYHLY DYQLPE+LRTPL+ LCLQIK L+LG I+ F
Sbjct: 588 NAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYF 647
Query: 745 LSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNC 804
LSR + PP +V +I++L + ALD+ E LT LG +L+ LPVEP +GKM++ GA+F C
Sbjct: 648 LSRLMDPPSNEAVVLSIKHLMELSALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCC 707
Query: 805 LDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQS 864
LDPV+T+ A LS +DPF++P K+ +A++ + + + SDHL +V A++GW++A+R
Sbjct: 708 LDPVLTIAASLSFKDPFVIPLGKEKIADARRKELAKETRSDHLTVVNAFEGWEEAKRRGF 767
Query: 865 GYE--YCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVD-RNTEN--CNKWSHDEHLIRAV 919
YE YCW+ FLS+ TL+ + +++ QF L AG V R+ ++ N S +E +I+AV
Sbjct: 768 RYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRSPKDPKANINSDNEKIIKAV 827
Query: 920 ICAGLFPGLCSV-VN---KEKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFNEKIKV 975
ICAGL+P + + +N K K + + T DG V ++ SVN Y WL+++ K++
Sbjct: 828 ICAGLYPKVAKIRLNLGKKRKMVKVHTKSDGLVSIHPKSVNVEQTDFHYNWLIYHLKMRT 887
Query: 976 NSVFLRDSTGVSDSVLLLFGGNIS 999
+S++L D T VS LL FGG+IS
Sbjct: 888 SSIYLYDCTEVSPYCLLFFGGDIS 911
>RGD|1308767 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10116 "Rattus norvegicus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009615 "response to virus" evidence=IEA;ISO]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308767 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
GeneTree:ENSGT00550000074257 CTD:170506 KO:K14442 OMA:RIRNRSY
OrthoDB:EOG4K6G3J EMBL:CH474003 IPI:IPI00367998
RefSeq:NP_001101148.1 UniGene:Rn.2744 Ensembl:ENSRNOT00000019824
GeneID:310461 KEGG:rno:310461 UCSC:RGD:1308767 NextBio:662035
Uniprot:D4A2Z8
Length = 1000
Score = 1474 (523.9 bits), Expect = 4.7e-151, P = 4.7e-151
Identities = 317/740 (42%), Positives = 444/740 (60%)
Query: 273 QMHEKQQAWQESPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQ 332
Q+ E Q + P +M FR+ LPSY + L+ I+ +QV V+SGETGCGKTTQ+ Q
Sbjct: 175 QLLEDLQKKKTDPRYIEMQRFRKKLPSYGMQKELVNLINNHQVTVISGETGCGKTTQVTQ 234
Query: 333 YILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGE--SVGYKVRLEG-MKG 389
+IL++ E G+AC I+CTQPRRISA++V+ERVAAER E G S GY++RL+ +
Sbjct: 235 FILDNYIERGIGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPR 294
Query: 390 RDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXX 449
+ +++CTTGI V+H+++DEIHER + D L+ V
Sbjct: 295 KQGSILYCTTGIILQWLQSDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRSDLKV 354
Query: 450 XXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYFLENILEMTRYRLNTYNQIDDYGQEK 509
MSATLNAE FS YFG PM+HIPGFT+PV Y LE+I+E RY Q + Q K
Sbjct: 355 ILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRY---FPEQKEHRSQFK 411
Query: 510 SWKMQKQALALRKR-KSSIASAVEDALEAADFREYSVQTQQSLSCWNPDSIGFNLIEHVL 568
MQ K K +I A YS T L + D + NLI ++
Sbjct: 412 RGFMQGHVNRQEKEEKEAIYKERWPAYIKELQTRYSASTIDVLEMMDDDKVDLNLIAALI 471
Query: 569 CHIVKKERPGAVLVFMTGWDDINSLKDQLQAHPLLGDPSRVLLLACHGSMASSEQRLIFD 628
+IV +E GA+LVF+ GWD+I++L D L + + R L++ H M + Q +F
Sbjct: 472 RYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS-DRFLIIPLHSLMPTVNQTQVFK 530
Query: 629 KPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXX 688
K GVRKIV+ATN+AETSITI+DVV+VID GK KET +D NN + W+SK
Sbjct: 531 KTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQ 590
Query: 689 XXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRA 748
VQPG CYHLY DYQLPE+LRTPL+ LCLQIK L+LG I+ FLSR
Sbjct: 591 RKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRL 650
Query: 749 LQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPV 808
+ PP +V +I++L + ALD+ E LT LG +L+ LPVEP +GKM++ GA+F CLDPV
Sbjct: 651 MDPPSDEAVVLSIKHLMELSALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPV 710
Query: 809 MTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYE- 867
+T+ A LS +DPF++P K+ +A++ + + + SDHL +V A++GW++A+R YE
Sbjct: 711 LTIAASLSFKDPFVIPLGKEKIADARRKELAKETRSDHLTVVNAFEGWEEAKRRGFRYEK 770
Query: 868 -YCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVD-RNTEN--CNKWSHDEHLIRAVICAG 923
YCW+ FLS+ TL+ + +++ QF L AG V R+ ++ N S +E +I+AVICAG
Sbjct: 771 DYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRSPKDPKANINSDNEKIIKAVICAG 830
Query: 924 LFPGLCSV-VN---KEKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVF 979
L+P + + +N K K + + T DG V ++ SVN Y WL+++ K++ +S++
Sbjct: 831 LYPKVAKIRLNLGKKRKMVKVHTKSDGLVSIHPKSVNVEQTDFHYNWLIYHLKMRTSSIY 890
Query: 980 LRDSTGVSDSVLLLFGGNIS 999
L D T VS LL FGG+IS
Sbjct: 891 LYDCTEVSPYCLLFFGGDIS 910
>UNIPROTKB|Q9H2U1 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:CH471052 GO:GO:0009615 GO:GO:0003725 EMBL:AC018452
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
HOGENOM:HOG000247063 EMBL:AF217190 EMBL:AJ577133 EMBL:AJ577134
EMBL:AK314435 EMBL:AC134026 EMBL:BC036035 EMBL:AB040921
IPI:IPI00027415 IPI:IPI00217760 IPI:IPI00784170 PIR:D56236
RefSeq:NP_001107869.1 RefSeq:NP_065916.2 UniGene:Hs.446270
ProteinModelPortal:Q9H2U1 SMR:Q9H2U1 IntAct:Q9H2U1
MINT:MINT-3066797 STRING:Q9H2U1 PhosphoSite:Q9H2U1 DMDM:74762733
PaxDb:Q9H2U1 PRIDE:Q9H2U1 DNASU:170506 Ensembl:ENST00000308361
Ensembl:ENST00000329463 Ensembl:ENST00000496811 GeneID:170506
KEGG:hsa:170506 UCSC:uc003ezy.4 UCSC:uc003ezz.4 UCSC:uc010hvq.3
CTD:170506 GeneCards:GC03M153990 HGNC:HGNC:14410 HPA:HPA035399
MIM:612767 neXtProt:NX_Q9H2U1 PharmGKB:PA27223 HOVERGEN:HBG081438
InParanoid:Q9H2U1 KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J
PhylomeDB:Q9H2U1 GenomeRNAi:170506 NextBio:88959
ArrayExpress:Q9H2U1 Bgee:Q9H2U1 CleanEx:HS_DHX36
Genevestigator:Q9H2U1 GermOnline:ENSG00000174953 Uniprot:Q9H2U1
Length = 1008
Score = 1457 (517.9 bits), Expect = 3.0e-149, P = 3.0e-149
Identities = 311/725 (42%), Positives = 436/725 (60%)
Query: 289 KMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACS 348
+M FR LPSY + L+ I +QV V+SGETGCGKTTQ+ Q+IL++ E +G+AC
Sbjct: 199 EMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACR 258
Query: 349 IICTQPRRISAMAVSERVAAERGEKLGE--SVGYKVRLEG-MKGRDTRLMFCTTGIXXXX 405
I+CTQPRRISA++V+ERVAAER E G S GY++RL+ + + +++CTTGI
Sbjct: 259 IVCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQW 318
Query: 406 XXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYF 465
V+H+++DEIHER + D L+ V MSATLNAE FS YF
Sbjct: 319 LQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEKFSEYF 378
Query: 466 GGAPMLHIPGFTYPVRAYFLENILEMTRYRLNTYNQIDDYGQEKSWKMQKQALALRKR-K 524
G PM+HIPGFT+PV Y LE+++E RY Q + Q K MQ K K
Sbjct: 379 GNCPMIHIPGFTFPVVEYLLEDVIEKIRY---VPEQKEHRSQFKRGFMQGHVNRQEKEEK 435
Query: 525 SSI-ASAVEDALEAADFREYSVQTQQSLSCWNPDSIGFNLIEHVLCHIVKKERPGAVLVF 583
+I D + R YS T + D + NLI ++ +IV +E GA+LVF
Sbjct: 436 EAIYKERWPDYVRELR-RRYSASTVDVIEMMEDDKVDLNLIVALIRYIVLEEEDGAILVF 494
Query: 584 MTGWDDINSLKDQLQAHPLLGDPSRVLLLACHGSMASSEQRLIFDKPEDGVRKIVLATNM 643
+ GWD+I++L D L + + + L++ H M + Q +F + GVRKIV+ATN+
Sbjct: 495 LPGWDNISTLHDLLMSQVMFKS-DKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNI 553
Query: 644 AETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXXXVQPGECYH 703
AETSITI+DVV+VID GK KET +D NN + W+SK VQPG CYH
Sbjct: 554 AETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYH 613
Query: 704 LYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPEPLSVKNAIEY 763
LY DYQLPE+LRTPL+ LCLQIK L+LG I+ FLSR + PP +V +I +
Sbjct: 614 LYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSNEAVLLSIRH 673
Query: 764 LQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLM 823
L + ALD+ E LT LG +L+ LPVEP +GKM++ GA+F CLDPV+T+ A LS +DPF++
Sbjct: 674 LMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVI 733
Query: 824 PFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYE--YCWKNFLSAQTLKA 881
P K+ +A++ + + + SDHL +V A++GW++A R YE YCW+ FLS+ TL+
Sbjct: 734 PLGKEKIADARRKELAKDTRSDHLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQM 793
Query: 882 IDSLRKQFLFLLKDAGLVD-RNTEN--CNKWSHDEHLIRAVICAGLFPGLCSV-VN---K 934
+ +++ QF L AG V RN ++ N S +E +I+AVICAGL+P + + +N K
Sbjct: 794 LHNMKGQFAEHLLGAGFVSSRNPKDPESNINSDNEKIIKAVICAGLYPKVAKIRLNLGKK 853
Query: 935 EKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVSDSVLLLF 994
K + + T DG V ++ SVN Y WL+++ K++ +S++L D T VS LL F
Sbjct: 854 RKMVKVYTKTDGLVAVHPKSVNVEQTDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFF 913
Query: 995 GGNIS 999
GG+IS
Sbjct: 914 GGDIS 918
>UNIPROTKB|Q05B79 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
[GO:0009615 "response to virus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0009615 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:DAAA02002574
EMBL:DAAA02002573 EMBL:BC122652 IPI:IPI00686397
RefSeq:NP_001073720.1 UniGene:Bt.103344 Ensembl:ENSBTAT00000008082
GeneID:509583 KEGG:bta:509583 InParanoid:Q05B79 NextBio:20869030
Uniprot:Q05B79
Length = 1010
Score = 1450 (515.5 bits), Expect = 1.6e-148, P = 1.6e-148
Identities = 315/767 (41%), Positives = 455/767 (59%)
Query: 246 DEGLYEQQEQLVQNSVVRERILRQRSLQMHEKQQAWQESPEGQKMLEFRRSLPSYKERDA 305
D+ + E L+Q + + L Q+ L+ +K++ E Q+ FR LPSY +
Sbjct: 162 DKYIDRDSEYLLQENEP-DATLDQQLLEDLQKKKTDLRYIEMQR---FREKLPSYGMQKE 217
Query: 306 LLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAVSER 365
L+ I +QV V+SGETGCGKTTQ+ Q+IL++ E +G+AC I+CTQPRRISA++V+ER
Sbjct: 218 LVNMIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAISVAER 277
Query: 366 VAAERGEKLGE--SVGYKVRLEG-MKGRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDE 422
VAAER E G S GY++RL+ + + +++CTTGI V+H+++DE
Sbjct: 278 VAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDPHLSSVSHIVLDE 337
Query: 423 IHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRA 482
IHER + D L+ V MSATLNAE FS YFG PM+HIPGFT+PV
Sbjct: 338 IHERNLQSDVLMTVVKDLLSYRPDLKVVLMSATLNAEKFSEYFGNCPMIHIPGFTFPVVE 397
Query: 483 YFLENILEMTRYRLNTYNQIDDYGQEKSWKMQKQALALRKRKSSIASAVEDALEAADFRE 542
Y LE+I+E RY Q + Q K MQ K + + R+
Sbjct: 398 YLLEDIIEKIRY---VPEQKEHRSQFKKGFMQGHVNRQEKEEKEAIYKERWPGYLRELRQ 454
Query: 543 -YSVQTQQSLSCWNPDSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQLQAHP 601
YS T + + + + NLI ++ +IV +E GA+LVF+ GWD+I++L D L +
Sbjct: 455 RYSASTVDVVEMMDDEKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQV 514
Query: 602 LLGDPSRVLLLACHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGK 661
+ + +++ H M + Q +F + GVRKIV+ATN+AETSITI+DVV+VID GK
Sbjct: 515 MFKS-DKFIIIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGK 573
Query: 662 AKETSYDALNNTPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPEL 721
KET +D NN + W+SK VQPG CYHLY DYQLPE+
Sbjct: 574 IKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNSLRASLLDDYQLPEI 633
Query: 722 LRTPLQSLCLQIKSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGR 781
LRTPL+ LCLQIK L+LG I+ FLSR + PP +V +I++L + ALD+ E LT LG
Sbjct: 634 LRTPLEELCLQIKILRLGGIAHFLSRLMDPPSNEAVLLSIKHLMELNALDKQEELTPLGV 693
Query: 782 NLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSAR 841
+L+ LPVEP +GKM++ GA+F CLDPV+T+ A LS +DPF++P K+ +A++ + + +
Sbjct: 694 HLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKVADARRKELAKD 753
Query: 842 DYSDHLALVRAYDGWKDAERHQSGYE--YCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLV 899
SDHL +V A+ GW+ A++ YE YCW+ FLS+ TL+ + +++ QF L AG V
Sbjct: 754 TKSDHLTVVNAFKGWEKAKQRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFV 813
Query: 900 D-RNTEN--CNKWSHDEHLIRAVICAGLFPGLCSV-VN---KEKSIALKTMEDGQVLLYS 952
RN ++ N S +E +I+AVICAGL+P + + +N K K + + T DG V ++
Sbjct: 814 SSRNPQDPESNINSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGVVAIHP 873
Query: 953 NSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVSDSVLLLFGGNIS 999
SVN + Y WL+++ K++ +S++L D T VS LL FGG+IS
Sbjct: 874 KSVNVEQTEFNYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDIS 920
>UNIPROTKB|E1C550 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 GeneTree:ENSGT00550000074257
OMA:GRIAYND EMBL:AADN02021100 IPI:IPI00601151
Ensembl:ENSGALT00000016841 Uniprot:E1C550
Length = 985
Score = 1444 (513.4 bits), Expect = 7.1e-148, P = 7.1e-148
Identities = 311/743 (41%), Positives = 437/743 (58%)
Query: 273 QMHEKQQAWQESPEGQKMLEFRRSLPSY--KERDALLKAISENQVVVVSGETGCGKTTQL 330
Q+ E + + P +M FR LPSY +++ L+ I+ N+V V+SGETGCGKTTQ+
Sbjct: 162 QLKEDLRKKKSDPRYIEMQRFREKLPSYGMRQKQELVNLINNNRVTVISGETGCGKTTQV 221
Query: 331 PQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEKLG--ESVGYKVRLEG-M 387
Q+IL+ E +G+ C I+CTQPRRISA++V+ERVAAER E G +S GY++RL+ +
Sbjct: 222 TQFILDDYIERGKGSTCRIVCTQPRRISAISVAERVAAERAEACGNGKSTGYQIRLQSRL 281
Query: 388 KGRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXX 447
+ +++CTTGI ++HV++DEIHER + D L+ +
Sbjct: 282 PRKQGSILYCTTGIVLQWLQSDKHLSSISHVVLDEIHERNLQSDVLMSIIKDLLNVRLDL 341
Query: 448 XXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYFLENILEMTRYRLNTYNQIDDYGQ 507
MSATLNAE FS YF PM+HIPGFT+PV Y LE+++E RY T D +
Sbjct: 342 KVILMSATLNAEKFSEYFDNCPMIHIPGFTFPVVEYLLEDVIEKLRY---TPENTDRRPR 398
Query: 508 EKSWKMQKQALALRKR-KSSI-ASAVEDALEAADFREYSVQTQQSLSCWNPDSIGFNLIE 565
K MQ K K I + L R YS T +L + D + +LI
Sbjct: 399 WKKGFMQGHISRPEKEEKEEIYRERWPEYLRQLRGR-YSAGTIDALEMMDDDKVDLDLIA 457
Query: 566 HVLCHIVKKERPGAVLVFMTGWDDINSLKDQLQAHPLLGDPSRVLLLACHGSMASSEQRL 625
++ HIV +E GA+LVF+ GWD+I++L D L + + R +++ H M + Q
Sbjct: 458 ALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS-DRFIIIPLHSLMPTVNQTQ 516
Query: 626 IFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXX 685
+F K GVRKIV+ATN+AETSITI+DVVFVID GK KET +D NN + W+SK
Sbjct: 517 VFKKTPPGVRKIVIATNIAETSITIDDVVFVIDGGKIKETHFDTQNNISTMAAEWVSKAN 576
Query: 686 XXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFL 745
VQPG CYHLY DYQLPE+LRTPL+ LCLQIK L+LG I+ FL
Sbjct: 577 AKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILKLGGIAYFL 636
Query: 746 SRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCL 805
S+ + PP +V AI +L + ALD E LT LG +L+ LPVEP +GKM++ GA+F CL
Sbjct: 637 SKLMDPPSRDAVMLAINHLMELNALDRQEELTPLGVHLARLPVEPHIGKMILFGALFCCL 696
Query: 806 DPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERH--Q 863
DPV+T+ A LS +DPF++P K+ +A++ + + S SDHL +V A+ GW++ R +
Sbjct: 697 DPVLTIAASLSFKDPFVIPLGKEKVADARRKELSKNTKSDHLTVVNAFTGWEETRRRGFR 756
Query: 864 SGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLV---DRNTENCNKWSHDEHLIRAVI 920
+ +YCW+ FLS TL+ + +++ QF L AG V D N S +E L++AVI
Sbjct: 757 TEKDYCWEYFLSPNTLQMLHNMKGQFAEHLLAAGFVNSRDPKDPKSNTNSDNEKLLKAVI 816
Query: 921 CAGLFPGLCSV----VNKEKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFNEKIKVN 976
CAGL+P + + K K + + T DG V ++ SVN + Y WLV++ K++ +
Sbjct: 817 CAGLYPKVAKIRPSFSKKRKMVKVCTKTDGTVNIHPKSVNVEETEFHYNWLVYHLKMRTS 876
Query: 977 SVFLRDSTGVSDSVLLLFGGNIS 999
S++L D T VS LL FGG+IS
Sbjct: 877 SIYLYDCTEVSPYCLLFFGGDIS 899
>ZFIN|ZDB-GENE-050419-20 [details] [associations]
symbol:si:dkey-119o24.1 "si:dkey-119o24.1"
species:7955 "Danio rerio" [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-050419-20 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000247063 GeneTree:ENSGT00550000074257
HOVERGEN:HBG081438 KO:K14442 OrthoDB:EOG4K6G3J OMA:GRIAYND
EMBL:BX908763 EMBL:BX927166 IPI:IPI00633899 RefSeq:NP_001122016.1
UniGene:Dr.130296 Ensembl:ENSDART00000109467 GeneID:569072
KEGG:dre:569072 InParanoid:A3KQN8 NextBio:20889491 Uniprot:A3KQN8
Length = 1037
Score = 1435 (510.2 bits), Expect = 6.4e-147, P = 6.4e-147
Identities = 312/771 (40%), Positives = 464/771 (60%)
Query: 254 EQLVQNSVVRERILRQRSLQMHEKQQAWQESPEGQKMLEFRRSLPSYKERDALLKAISEN 313
E L+Q+ VV+ L + ++ + QQ +++ +ML+FR+ LPSY R+ L++ IS N
Sbjct: 181 EYLLQD-VVQIPFLDE---ELKKDQQKKEDNAAYIEMLKFRKKLPSYGMREELVRLISAN 236
Query: 314 QVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEK 373
+V+V+SGETGCGKTTQ+ Q+IL+ + +G+ C ++CTQPRRISA++V+ERVA ER E
Sbjct: 237 RVLVISGETGCGKTTQVTQFILDDFIQRGQGSLCRVVCTQPRRISAISVAERVAVERAEP 296
Query: 374 LGE--SVGYKVRLEG-MKGRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNE 430
+GE S GY++RL+ + + L++CTTG+ +TH+++DEIHER +
Sbjct: 297 VGEGKSCGYQIRLQSRLPRKQGSLLYCTTGVILQWLHSDPYLSSITHLVLDEIHERSVQS 356
Query: 431 DFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYFLENILE 490
D L+ + MSATLNAE FS YF PM+HIPG+T+PV Y LE+++E
Sbjct: 357 DILITIVKDLLTARDDLKVVLMSATLNAEKFSKYFNNCPMIHIPGYTFPVTEYLLEDVVE 416
Query: 491 MTRYRLNTYNQIDDYGQEKSWKMQKQALALRKRKSSIASAVEDALE--AADFRE-YSVQT 547
+ ++ Y Q + ++++ + R K I + ++ A R+ +S T
Sbjct: 417 LLGFQPR-YKQRKPHYRKRN----NHGSSARPEKGKIEAKYHESWPCYARTLRDRFSDTT 471
Query: 548 QQSLSCWNPD-SIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQLQAHPLLGDP 606
+ L + D +I L ++ HI E GA+LVF+ GWD+I++L D L + +
Sbjct: 472 IEVLGMMDDDDNIDLELTAALIRHIAVNENEGAILVFLPGWDNISTLNDLLMSDQMFKSG 531
Query: 607 S-RVLLLACHGSMAS-SEQRLI------FDKPEDGVRKIVLATNMAETSITINDVVFVID 658
R +++ H M + S+ ++I F KP GVRKIV+ATN+AETSITI+DVV+VID
Sbjct: 532 RYRFIIIPLHSLMPTVSQTQVISLFPQVFKKPPPGVRKIVIATNIAETSITIDDVVYVID 591
Query: 659 CGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQL 718
GK KET +D NN + W+S V PG+CYHLY +YQL
Sbjct: 592 GGKIKETHFDTQNNIRTMTAEWVSIANAKQRKGRAGRVSPGKCYHLYNGLRASLLDNYQL 651
Query: 719 PELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTV 778
PE+ RTPL+ LCLQIK L+LG I+ FL + + PP +++ AI +L + ALD +E LT
Sbjct: 652 PEIQRTPLEELCLQIKVLKLGPIATFLQKTMDPPSDRAIELAITHLVDLNALDRDEKLTP 711
Query: 779 LGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQF 838
LG +L+ +PVEP +GKM++ GA+ CLDPV+T+ A LS +DPF +P K+ +A+ + F
Sbjct: 712 LGFHLARMPVEPHIGKMILFGALLGCLDPVLTIAASLSFKDPFFIPLGKEKIADQRRKMF 771
Query: 839 SARDYSDHLALVRAYDGWKDAERHQSGYE--YCWKNFLSAQTLKAIDSLRKQFLFLLKDA 896
S SDHL++V A+ GW+DA+R S +E YCW NFLSA TL+ + +++ QF L A
Sbjct: 772 SQNSRSDHLSIVNAFLGWEDAKRQGSRFEREYCWDNFLSANTLQMLQNMKGQFAEHLLRA 831
Query: 897 GLV---DRNTENCNKWSHDEHLIRAVICAGLFPGLCSVV---NKEKSIALK--TMEDGQV 948
G V D + N S ++ L++AVI AGL+P + + NK++ + +K T DG+V
Sbjct: 832 GFVNSKDPKDPSSNINSENKKLVKAVIVAGLYPKVAKISPSHNKKRPMPVKVYTKADGKV 891
Query: 949 LLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVSDSVLLLFGGNIS 999
++ SVNA + Y WLV++ K+K S+FL D T VS LL FGGNIS
Sbjct: 892 CIHPKSVNAEETQFQYKWLVYHLKMKTTSIFLYDCTEVSPFSLLFFGGNIS 942
>UNIPROTKB|E2QTL7 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
Ensembl:ENSCAFT00000013769 Uniprot:E2QTL7
Length = 988
Score = 1429 (508.1 bits), Expect = 2.8e-146, P = 2.8e-146
Identities = 326/799 (40%), Positives = 459/799 (57%)
Query: 216 EVDAHLKAYLSQKYINASMSSLSNVGST--TNDEGLYEQQEQLVQNSVVRERILRQRSLQ 273
E+ A K +K N +S T D+ + E L+Q + + L Q+ L+
Sbjct: 122 EIPAENKPNSEKKLENQEKKLISQEKRTFRIRDKYIDRDSEYLLQENEP-DVALDQQLLE 180
Query: 274 MHEKQQAWQESPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQY 333
K+++ E M FR LPSY + L+ I +QV V+SGETGCGKTTQ+ Q+
Sbjct: 181 DLRKKKSDLRYIE---MQHFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQF 237
Query: 334 ILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGE--SVGYKVRLEG-MKGR 390
IL+ E +G+AC I+CTQPRRISA++V+ERVAAER E G S GY++RL+ + +
Sbjct: 238 ILDDYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRK 297
Query: 391 DTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXX 450
+++CTTGI V+H+++DEIHER + D L+ V
Sbjct: 298 QGSILYCTTGIILQWLQSDSHLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFRPDLKVI 357
Query: 451 XMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYFLENILEMTRYRLNTYNQIDDYGQEKS 510
MSATLNAE FS YFG PM+HIPGFT+PV Y LE+I+E RY Q + Q K
Sbjct: 358 LMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRY---VPEQKEQRSQFKR 414
Query: 511 WKMQKQALALRKRKSSIASAVEDALEAADFRE-YSVQTQQSLSCWNPDSIGFNLIEHVLC 569
MQ K + + R+ YS T + + D + NLI ++
Sbjct: 415 GFMQGHVNRQEKEEKEAIYKERWPDYVRELRKRYSASTVDVMEMIDDDKVDLNLIAALIR 474
Query: 570 HIVKKERPGAVLVFMTGWDDINSLKDQLQAHPLLGDPSRVLLLACHGSMASSEQRLIFDK 629
HIV +E GA+LVF+ GWD+I++L D L S+V+ S +F K
Sbjct: 475 HIVLEEEDGAILVFLPGWDNISTLHDLLM--------SQVMF-------KSDTIGQVFKK 519
Query: 630 PEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXX 689
GVRKIV+ATN+AETSITI+DVV+VID GK KET +D NN + W+SK
Sbjct: 520 TPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQR 579
Query: 690 XXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRAL 749
VQPG CYHLY DYQLPE+LRTPL+ LCLQIK L+LG I+ FLSR +
Sbjct: 580 KGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLM 639
Query: 750 QPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVM 809
PP +V +I++L + ALD+ E LT LG +L+ LPVEP +GKM++ GA+F CLDPV+
Sbjct: 640 DPPSDEAVSLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVL 699
Query: 810 TVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYE-- 867
T+ A LS +DPF++P K+ +A++ + + + SDHL +V A++GW++A R YE
Sbjct: 700 TIAASLSFKDPFVIPLGKEKIADARRKELAKDTKSDHLTVVNAFEGWEEARRRGFRYEKD 759
Query: 868 YCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVD-RNTEN--CNKWSHDEHLIRAVICAGL 924
YCW+ FLS+ TL+ + +++ QF L AG V RN ++ N S +E +I+AVICAGL
Sbjct: 760 YCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPKSNINSDNEKIIKAVICAGL 819
Query: 925 FPGLCSV-VN---KEKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFL 980
+P + + +N K K + + T DG V ++ SVN + Y WL+++ K++ +S++L
Sbjct: 820 YPKVAKIRLNLGKKRKMVKVYTKTDGLVAIHPKSVNVEQTEFHYNWLIYHLKMRTSSIYL 879
Query: 981 RDSTGVSDSVLLLFGGNIS 999
D T VS LL FGG+IS
Sbjct: 880 YDCTEVSPYCLLFFGGDIS 898
>UNIPROTKB|F5GZS0 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC134026
HGNC:HGNC:14410 IPI:IPI00922725 ProteinModelPortal:F5GZS0
SMR:F5GZS0 PRIDE:F5GZS0 Ensembl:ENST00000544526 ArrayExpress:F5GZS0
Bgee:F5GZS0 Uniprot:F5GZS0
Length = 994
Score = 1421 (505.3 bits), Expect = 1.9e-145, P = 1.9e-145
Identities = 311/725 (42%), Positives = 435/725 (60%)
Query: 289 KMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACS 348
+M FR LPSY + L+ I +QV V+SGETGCGKTTQ+ Q+IL++ E +G+AC
Sbjct: 199 EMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACR 258
Query: 349 IICTQPRRISAMAVSERVAAERGEKLGE--SVGYKVRLEG-MKGRDTRLMFCTTGIXXXX 405
I+CTQPRRISA++V+ERVAAER E G S GY++RL+ + + +++CTTGI
Sbjct: 259 IVCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQW 318
Query: 406 XXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYF 465
V+H+++DEIHER + D L+ V MSATLNAE FS YF
Sbjct: 319 LQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEKFSEYF 378
Query: 466 GGAPMLHIPGFTYPVRAYFLENILEMTRYRLNTYNQIDDYGQEKSWKMQKQALALRKR-K 524
G PM+HIPGFT+PV Y LE+++E RY Q + Q K MQ K K
Sbjct: 379 GNCPMIHIPGFTFPVVEYLLEDVIEKIRY---VPEQKEHRSQFKRGFMQGHVNRQEKEEK 435
Query: 525 SSI-ASAVEDALEAADFREYSVQTQQSLSCWNPDSIGFNLIEHVLCHIVKKERPGAVLVF 583
+I D + R YS T + D + NLI ++ +IV +E GA+LVF
Sbjct: 436 EAIYKERWPDYVRELR-RRYSASTVDVIEMMEDDKVDLNLIVALIRYIVLEEEDGAILVF 494
Query: 584 MTGWDDINSLKDQLQAHPLLGDPSRVLLLACHGSMASSEQRLIFDKPEDGVRKIVLATNM 643
+ GWD+I++L D L S+V+ + G+M+ +F + GVRKIV+ATN+
Sbjct: 495 LPGWDNISTLHDLLM--------SQVMFKS--GTMSQ-----VFKRTPPGVRKIVIATNI 539
Query: 644 AETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXXXVQPGECYH 703
AETSITI+DVV+VID GK KET +D NN + W+SK VQPG CYH
Sbjct: 540 AETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYH 599
Query: 704 LYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPEPLSVKNAIEY 763
LY DYQLPE+LRTPL+ LCLQIK L+LG I+ FLSR + PP +V +I +
Sbjct: 600 LYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSNEAVLLSIRH 659
Query: 764 LQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLM 823
L + ALD+ E LT LG +L+ LPVEP +GKM++ GA+F CLDPV+T+ A LS +DPF++
Sbjct: 660 LMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVI 719
Query: 824 PFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYE--YCWKNFLSAQTLKA 881
P K+ +A++ + + + SDHL +V A++GW++A R YE YCW+ FLS+ TL+
Sbjct: 720 PLGKEKIADARRKELAKDTRSDHLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQM 779
Query: 882 IDSLRKQFLFLLKDAGLVD-RNTEN--CNKWSHDEHLIRAVICAGLFPGLCSV-VN---K 934
+ +++ QF L AG V RN ++ N S +E +I+AVICAGL+P + + +N K
Sbjct: 780 LHNMKGQFAEHLLGAGFVSSRNPKDPESNINSDNEKIIKAVICAGLYPKVAKIRLNLGKK 839
Query: 935 EKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVSDSVLLLF 994
K + + T DG V ++ SVN Y WL+++ K++ +S++L D T VS LL F
Sbjct: 840 RKMVKVYTKTDGLVAVHPKSVNVEQTDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFF 899
Query: 995 GGNIS 999
GG+IS
Sbjct: 900 GGDIS 904
>UNIPROTKB|E7EWK3 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0009615 GO:GO:0003725
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
EMBL:AC134026 HGNC:HGNC:14410 IPI:IPI00945848
ProteinModelPortal:E7EWK3 SMR:E7EWK3 Ensembl:ENST00000481941
ArrayExpress:E7EWK3 Bgee:E7EWK3 Uniprot:E7EWK3
Length = 797
Score = 1373 (488.4 bits), Expect = 2.4e-140, P = 2.4e-140
Identities = 294/682 (43%), Positives = 410/682 (60%)
Query: 289 KMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACS 348
+M FR LPSY + L+ I +QV V+SGETGCGKTTQ+ Q+IL++ E +G+AC
Sbjct: 113 EMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACR 172
Query: 349 IICTQPRRISAMAVSERVAAERGEKLGE--SVGYKVRLEG-MKGRDTRLMFCTTGIXXXX 405
I+CTQPRRISA++V+ERVAAER E G S GY++RL+ + + +++CTTGI
Sbjct: 173 IVCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQW 232
Query: 406 XXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYF 465
V+H+++DEIHER + D L+ V MSATLNAE FS YF
Sbjct: 233 LQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEKFSEYF 292
Query: 466 GGAPMLHIPGFTYPVRAYFLENILEMTRYRLNTYNQIDDYGQEKSWKMQKQALALRKR-K 524
G PM+HIPGFT+PV Y LE+++E RY Q + Q K MQ K K
Sbjct: 293 GNCPMIHIPGFTFPVVEYLLEDVIEKIRY---VPEQKEHRSQFKRGFMQGHVNRQEKEEK 349
Query: 525 SSI-ASAVEDALEAADFREYSVQTQQSLSCWNPDSIGFNLIEHVLCHIVKKERPGAVLVF 583
+I D + R YS T + D + NLI ++ +IV +E GA+LVF
Sbjct: 350 EAIYKERWPDYVRELR-RRYSASTVDVIEMMEDDKVDLNLIVALIRYIVLEEEDGAILVF 408
Query: 584 MTGWDDINSLKDQLQAHPLLGDPSRVLLLACHGSMASSEQRLIFDKPEDGVRKIVLATNM 643
+ GWD+I++L D L + + + L++ H M + Q +F + GVRKIV+ATN+
Sbjct: 409 LPGWDNISTLHDLLMSQVMFKS-DKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNI 467
Query: 644 AETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXXXVQPGECYH 703
AETSITI+DVV+VID GK KET +D NN + W+SK VQPG CYH
Sbjct: 468 AETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYH 527
Query: 704 LYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPEPLSVKNAIEY 763
LY DYQLPE+LRTPL+ LCLQIK L+LG I+ FLSR + PP +V +I +
Sbjct: 528 LYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSNEAVLLSIRH 587
Query: 764 LQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLM 823
L + ALD+ E LT LG +L+ LPVEP +GKM++ GA+F CLDPV+T+ A LS +DPF++
Sbjct: 588 LMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVI 647
Query: 824 PFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYE--YCWKNFLSAQTLKA 881
P K+ +A++ + + + SDHL +V A++GW++A R YE YCW+ FLS+ TL+
Sbjct: 648 PLGKEKIADARRKELAKDTRSDHLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQM 707
Query: 882 IDSLRKQFLFLLKDAGLVD-RNTEN--CNKWSHDEHLIRAVICAGLFPGLCSV-VN---K 934
+ +++ QF L AG V RN ++ N S +E +I+AVICAGL+P + + +N K
Sbjct: 708 LHNMKGQFAEHLLGAGFVSSRNPKDPESNINSDNEKIIKAVICAGLYPKVAKIRLNLGKK 767
Query: 935 EKSIALKTMEDGQVLLYSNSVN 956
K + + T DG V ++ SVN
Sbjct: 768 RKMVKVYTKTDGLVAVHPKSVN 789
>TAIR|locus:2196265 [details] [associations]
symbol:AT1G58060 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
IPI:IPI00533149 RefSeq:NP_176103.2 UniGene:At.27872
ProteinModelPortal:F4I9Q5 SMR:F4I9Q5 PRIDE:F4I9Q5
EnsemblPlants:AT1G58060.1 GeneID:842173 KEGG:ath:AT1G58060
OMA:FLSYKSP Uniprot:F4I9Q5
Length = 1459
Score = 789 (282.8 bits), Expect = 5.3e-136, Sum P(3) = 5.3e-136
Identities = 188/477 (39%), Positives = 269/477 (56%)
Query: 452 MSATLNAELFSSYFGGAPMLHIPGFTYPVRAYFLENILEMTRYRLNTYNQIDDYGQEKSW 511
MSAT++A+LFS YFG P++ G T+PV +FLE I E Y L + + S
Sbjct: 779 MSATVDADLFSRYFGHCPVITAQGRTHPVTTHFLEEIYESINYLLAPDSPAA-LRSDTSI 837
Query: 512 KMQKQALALRKRKSSIASA--------VEDALE----AADFREYSVQTQQSLSCWNPDSI 559
K + ++ R+ K ++ A ED L ++++ YS QTQQ+L N D I
Sbjct: 838 KDKLGSVNDRRGKKNLVLAGWGDDYLLSEDCLNPFYVSSNYNSYSDQTQQNLKRLNEDRI 897
Query: 560 GFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQLQAHPLLGDPSRVLLLACHGSMA 619
+ L+E ++CHI GA+L+F+ G +I L D L A P+ LL H S+A
Sbjct: 898 DYELLEELICHIDDTCEEGAILIFLPGVAEIYMLLDMLAASYRFRGPAADWLLPLHSSIA 957
Query: 620 SSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPS 679
SSEQR +F +P G+RK++ ATN+AETSITI+DVV+VID GK KE Y+ ++
Sbjct: 958 SSEQRKVFLRPPKGLRKVIAATNIAETSITIDDVVYVIDSGKHKENRYNPQKKLSSMVED 1017
Query: 680 WISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFA-DYQLPELLRTPLQSLCLQIKSLQL 738
WIS+ V+PG C+ LY RY ++ YQ+PE+LR PL LCLQIK L L
Sbjct: 1018 WISQANARQRTGRAGRVKPGICFSLYTRYRFEKLMRPYQVPEMLRMPLVELCLQIKLLGL 1077
Query: 739 GSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLIL 798
G I FLSRAL+PP ++ +AI L +GA++ +E LT LG +L+ LPV+ +GKML+
Sbjct: 1078 GHIKPFLSRALEPPSEGAMTSAISLLHEVGAVEGDEELTPLGHHLAKLPVDVLIGKMLLY 1137
Query: 799 GAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQF------SARDY------SDH 846
G IF CL P++++ A LS + PF+ P D+K + K S+ D SDH
Sbjct: 1138 GGIFGCLSPILSIAAFLSYKSPFIYPKDEKQNVDRVKLALLSDNGVSSSDLNNNDRQSDH 1197
Query: 847 LALVRAYDGWKDA--ERH-QSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVD 900
L ++ AYD W ER ++ +C FLS+ ++ I +R QF LL D GL++
Sbjct: 1198 LLMMVAYDKWVKILQERGMKAAQRFCESKFLSSSVMRMIRDMRVQFGTLLADIGLIN 1254
Score = 467 (169.5 bits), Expect = 5.3e-136, Sum P(3) = 5.3e-136
Identities = 130/371 (35%), Positives = 194/371 (52%)
Query: 140 LTMLLRNKDEQ-EVVSRAKKDRRDFEQLSALATRMGLH---SRQYAKVVVFSKAPLPNYR 195
+T+ L KDE E + A+ F L L + + +H + YA +V+ K
Sbjct: 462 VTLQLPPKDENFESIEDAQNKVAAFA-LHKLFSDLPVHFAITEPYASLVLIWKQE-ELLC 519
Query: 196 SDLDEKRPQREVILPFGLLREVDAHLKAYLSQKYINASMSSLSNVGSTTNDEGLYEQQEQ 255
+ + R LL E D+ S + N S+ + + +D G+ + +
Sbjct: 520 TTIQSTEEDRRANFVDKLLEE-DSFSLTTSSSSFEN-SLPLVDSYVKDKDDLGVVKSNNR 577
Query: 256 LVQNSVVRERILRQRSLQMHEKQQAWQESPEGQKMLEFRRSLPSYKERDALLKAISENQV 315
++S + L SLQ KQ+ + + + + ML+ R +LP + ++ +L+ + E V
Sbjct: 578 AKRDSYIEAECL---SLQ--RKQENKKRTQKYKDMLKTRTALPISEVKNGILQHLKEKDV 632
Query: 316 VVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEK-- 373
+VV GETG GKTTQ+PQ+IL+ ++ G C+IICTQPRRI+A++V++RVA ER E
Sbjct: 633 LVVCGETGSGKTTQVPQFILDDMIDSGHGGYCNIICTQPRRIAAISVAQRVADERCESSP 692
Query: 374 -LGES-VGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNED 431
L +S VGY+VRLE + TRL+FCTTGI VTH+IVDE+HER + D
Sbjct: 693 GLDDSLVGYQVRLESARSDKTRLLFCTTGILLRKLAGDRTLNDVTHIIVDEVHERSLLGD 752
Query: 432 FLLIVXXXXXXXXXXXXXXX------MSATLNAELFSSYFGGAPMLHIPGFTYPVRAYFL 485
FLLI+ MSAT++A+LFS YFG P++ G T+PV +FL
Sbjct: 753 FLLIILKSLIEKQSCDNTSRKLKVILMSATVDADLFSRYFGHCPVITAQGRTHPVTTHFL 812
Query: 486 ENILEMTRYRL 496
E I E Y L
Sbjct: 813 EEIYESINYLL 823
Score = 142 (55.0 bits), Expect = 5.3e-136, Sum P(3) = 5.3e-136
Identities = 35/112 (31%), Positives = 64/112 (57%)
Query: 903 TENCNKWSHDEHLIRAVICAGLFPGLCS-----------VVNKE--KSIALKTMEDG--Q 947
T+ N +S +++A++CAGL+P + + + K+ ++ + DG +
Sbjct: 1277 TQPFNMYSQQPEVVKAILCAGLYPNIAANDKGITETTFNSLTKQGNQTKSYSAWYDGRRE 1336
Query: 948 VLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVSDSVLLLFGGNIS 999
V ++ +S+N+ P+LVF EK++ N V+LRD+T VS +LLFGG+I+
Sbjct: 1337 VHIHPSSINSNFKAFQNPFLVFLEKVETNKVYLRDTTIVSPFSILLFGGSIN 1388
Score = 44 (20.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 533 DALEAADF-REYSV-QTQQSLSCWNPDSIGFN 562
D AD+ R+Y + Q ++ L CW + G +
Sbjct: 183 DKSSQADWIRQYMMRQEEEELECWEDEVDGID 214
Score = 42 (19.8 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 17/64 (26%), Positives = 32/64 (50%)
Query: 198 LDEKRPQREVILP-FG---LLREVDAHLKAYLSQKYINASMSSLSNVGSTTNDEGLYEQQ 253
++++R ++ ++L +G LL E D Y+S Y + S + N+ D YE
Sbjct: 844 VNDRRGKKNLVLAGWGDDYLLSE-DCLNPFYVSSNYNSYSDQTQQNLKRLNEDRIDYELL 902
Query: 254 EQLV 257
E+L+
Sbjct: 903 EELI 906
Score = 41 (19.5 bits), Expect = 3.5e-91, Sum P(3) = 3.5e-91
Identities = 28/107 (26%), Positives = 44/107 (41%)
Query: 152 VVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPN--YRSDLDEKRPQREVIL 209
+ ++ K+D+R EQ + LA R +Q + S+A L + R E ++E
Sbjct: 240 IKAKEKRDKRGQEQ-AGLAIRK---LKQEISDLGLSEAMLESEFQREHAFESATEQESTC 295
Query: 210 PFG--LLREVDAHLKAYLSQKYINASMSSLSNVGSTTNDEGLYEQQE 254
P L VDA + S+ L N+ TN YE +E
Sbjct: 296 PISDNLHESVDAD----------DVSVQMLDNLTLNTNPAESYESEE 332
>ZFIN|ZDB-GENE-030131-4078 [details] [associations]
symbol:dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box
polypeptide 57" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4078 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257
EMBL:BX248102 EMBL:AL935288 EMBL:CT998560 IPI:IPI00513320
Ensembl:ENSDART00000080351 ArrayExpress:F1QCB1 Bgee:F1QCB1
Uniprot:F1QCB1
Length = 1430
Score = 703 (252.5 bits), Expect = 5.1e-135, Sum P(4) = 5.1e-135
Identities = 154/412 (37%), Positives = 248/412 (60%)
Query: 503 DDYGQEKSWKMQKQALALRKRKSSIASAVEDALEAAD----FREYSVQTQQSLSCWNPDS 558
DDYG W + R ++S S + L D + YS ++L+ + D
Sbjct: 816 DDYG---GWSFT----SFRNKESVKDSVPDQQLSQQDLTVRYSNYSKSVVKTLAAMDLDK 868
Query: 559 IGFNLIEHVLCHIVKKER---PGAVLVFMTGWDDINSLKDQLQAHPLLGD--PSRVLLLA 613
I +L+E +L IV + PGAVLVF+ G +I L +QLQ++ + + +R ++
Sbjct: 869 INMDLVESLLEWIVDGDHSYPPGAVLVFLPGLAEIKQLYEQLQSNRMFNNRRTNRCVVYP 928
Query: 614 CHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNT 673
H S+++ EQ+ +F +P++GV KI+++TN+AETS+TI+DVV+VID G+ KE YDA +
Sbjct: 929 LHSSLSNEEQQAVFTRPQNGVTKIIISTNIAETSVTIDDVVYVIDSGRMKEKRYDASRSM 988
Query: 674 PCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDA-FADYQLPELLRTPLQSLCLQ 732
L W+S+ V G C+HL+ + ++ + QLPE+ R PL+ LCL+
Sbjct: 989 ESLEDVWVSRANALQRKGRAGRVASGVCFHLFTSHRFEHHLSQQQLPEIQRVPLEQLCLR 1048
Query: 733 IKSLQLGS---ISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVE 789
+K L++ + + S+ ++PP S++ A + L +GAL + E+LT LG +L+ LPV+
Sbjct: 1049 VKVLEVFAERPLDSVFSQLIEPPTEGSLEAAKQRLCALGALTDEESLTPLGWHLACLPVD 1108
Query: 790 PKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLAL 849
++GK+++LGAIF CLDP +T+ A L+ + PF+ P+DK++ A K FS + SDHLAL
Sbjct: 1109 VRIGKLMLLGAIFRCLDPALTIAASLAFKSPFVSPWDKREEANEKKLAFSLAN-SDHLAL 1167
Query: 850 VRAYDGWKDAERH--QSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLV 899
++AY GW +A + ++GY+YC +NFLS + L+ I L++QF LL D G V
Sbjct: 1168 MQAYKGWCNAAQSGFKAGYQYCRENFLSIRGLQEIACLKRQFAELLSDIGFV 1219
Score = 551 (199.0 bits), Expect = 5.1e-135, Sum P(4) = 5.1e-135
Identities = 111/250 (44%), Positives = 160/250 (64%)
Query: 246 DEGLYEQQEQLVQNSVVRERILRQRSLQMHEKQQAWQESPEGQKMLEFRRSLPSYKERDA 305
+E ++++V+ + +R +++ + ++ + + + S M E R+ LP++++R+A
Sbjct: 531 NESYVNLRKRMVKKTEIRTEQMQEENKKLCREFKRKRSSRRYISMQEQRQKLPAWQKREA 590
Query: 306 LLKAISENQVVVVSGETGCGKTTQLPQYILESETEAAR-GAACSIICTQPRRISAMAVSE 364
+L+ + +NQV+V+SG TGCGKTTQ+PQ+IL++ + R +IICTQPRRISA+AV+
Sbjct: 591 ILECLVKNQVLVISGMTGCGKTTQIPQFILDNFLQTGRPDRVANIICTQPRRISAIAVAT 650
Query: 365 RVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIH 424
RVA ER E LG S GY++RLE ++ TRLMFCTTG+ GVTHVIVDE+H
Sbjct: 651 RVAQERAEALGHSTGYQIRLETVRSSITRLMFCTTGVLLRRLEGDPELSGVTHVIVDEVH 710
Query: 425 ERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYF 484
ER DFLL+V MSATLNAELFS YF P +HIPG T+PV +F
Sbjct: 711 ERTEESDFLLLVLKDLIVKRTDLKVIMMSATLNAELFSQYFNNCPCIHIPGRTFPVEQFF 770
Query: 485 LENILEMTRY 494
LE+ + TRY
Sbjct: 771 LEDAIAKTRY 780
Score = 110 (43.8 bits), Expect = 5.1e-135, Sum P(4) = 5.1e-135
Identities = 25/70 (35%), Positives = 39/70 (55%)
Query: 927 GLCSVVNKEKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGV 986
G + K + T DG V ++ +SVN V P+LV++EK+K + VF+RD + V
Sbjct: 1285 GAMKMQPKAEEQRFMTKSDGAVHIHPSSVNFSVRHYDSPYLVYHEKVKTSRVFIRDCSMV 1344
Query: 987 SDSVLLLFGG 996
++LFGG
Sbjct: 1345 CVYPMVLFGG 1354
Score = 49 (22.3 bits), Expect = 5.1e-135, Sum P(4) = 5.1e-135
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 897 GLVDRNTENCNKWSHDEHLIRAVICAGLFPGLCSV 931
G+++ N S + L+ A++CA L+P + V
Sbjct: 1238 GVLEATGYEANLNSDNTKLMSAMLCAALYPNVVQV 1272
>TAIR|locus:2052841 [details] [associations]
symbol:HVT1 "helicase in vascular tissue and tapetum"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] InterPro:IPR001374
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00393 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 IPI:IPI00521007
RefSeq:NP_850154.2 UniGene:At.19969 ProteinModelPortal:F4INY4
SMR:F4INY4 PRIDE:F4INY4 EnsemblPlants:AT2G30800.1 GeneID:817631
KEGG:ath:AT2G30800 OMA:PYNNVST Uniprot:F4INY4
Length = 1299
Score = 787 (282.1 bits), Expect = 3.7e-129, Sum P(2) = 3.7e-129
Identities = 179/522 (34%), Positives = 282/522 (54%)
Query: 495 RLNTYNQIDDYGQEKSWKMQK--QALALRKRKSSIASAVEDALEAADFREYSVQTQQSLS 552
R++ + +G + S K + AL L + ++ + +A A + + S Q QQ L
Sbjct: 463 RISDVCMLLSFGADWSLKSKDGMTALELAEAENQLEAAQIIREHADNSQSNSQQGQQLLD 522
Query: 553 CW----NPDSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQLQAHPLLGDPSR 608
+ NP+ + +LI+ ++ I GA+LVF+ GWDDIN + +L +P D ++
Sbjct: 523 KYMATINPEQVDVSLIQQLMRKICGDSEDGAILVFLPGWDDINKTRQRLLENPFFADSAK 582
Query: 609 VLLLACHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYD 668
++ H + + EQ+ +F++P G RKIVLATN+AE+++TI+DVV+VID G+ KE SYD
Sbjct: 583 FDIICLHSMVPAGEQKKVFNRPPPGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYD 642
Query: 669 ALNNTPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQS 728
NN L SW+SK QPG CYHLY R + D+++PE+ R P++
Sbjct: 643 PYNNVSTLQSSWVSKANAKQRQGRAGRCQPGICYHLYSRLRAASMPDFKVPEIKRMPVEE 702
Query: 729 LCLQIKSLQLG-SISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLP 787
LCLQ+K L ++FL + L PP S+ NA+ LQ IGAL E LT LG LP
Sbjct: 703 LCLQVKILDPNCKTNDFLQKLLDPPVDQSIANALSILQDIGALTPQEELTELGEKFGHLP 762
Query: 788 VEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFD--KKDLAESAKAQFSAR--DY 843
V P + KML + NCLDP +T+ ++PF MP ++ A +AK + ++
Sbjct: 763 VHPLISKMLFFAVLVNCLDPALTLACAADYKEPFTMPMSPVERQKAAAAKLELASLCGGD 822
Query: 844 SDHLALVRAYDGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNT 903
SDHLA+V A++ WK+A+ E+C + F+S +K +D +R Q LK G++ +
Sbjct: 823 SDHLAVVAAFECWKNAKGRGLSAEFCSQYFVSPSAMKMLDQMRSQLESELKRHGIIPNDI 882
Query: 904 ENCNKWSHDEHLIRAVICAGLFP--G-LCSVVNKEKSIALKTMEDGQVLLYS--NSVNAG 958
+C++ S D ++RAV+ GL+P G LC + ++T +V ++S N+ N
Sbjct: 883 SSCSQNSRDPGILRAVLAVGLYPMVGRLCPAFGNNRRTIVETASGAKVRVHSLSNNFNLS 942
Query: 959 VPKIPYPWLVFNEKIKVNS-VFLRDSTGVSDSVLLLFGGNIS 999
K LVF+E + + + +R+ T D LLL I+
Sbjct: 943 SKKYDESLLVFDEITRGDGGMHIRNCTVARDLPLLLISTEIA 984
Score = 517 (187.1 bits), Expect = 3.7e-129, Sum P(2) = 3.7e-129
Identities = 99/209 (47%), Positives = 136/209 (65%)
Query: 288 QKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAAC 347
+++ + R LP +DA+ A+ NQV+++SGETGCGKTTQ+PQY+L+ + R C
Sbjct: 178 KEITKLRSKLPITSFKDAITSAVESNQVILISGETGCGKTTQVPQYLLDHMWSSKR-ETC 236
Query: 348 SIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXX 407
I+CTQPRRISAM+VSER++ ERGE +GE++GYKVRL+ GR + ++FCT GI
Sbjct: 237 KIVCTQPRRISAMSVSERISCERGESIGENIGYKVRLQSKGGRHSSVVFCTNGILLRVLV 296
Query: 408 XXXXXXGV---THVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSY 464
V TH+IVDEIHER DF+L + MSATL+AE FS Y
Sbjct: 297 GKGSVSSVSDITHIIVDEIHERDCYSDFMLAIIRDLLPSNPHLRLILMSATLDAERFSGY 356
Query: 465 FGGAPMLHIPGFTYPVRAYFLENILEMTR 493
FGG P++ +PGFTYPVR +LE++L + +
Sbjct: 357 FGGCPVVRVPGFTYPVRTLYLEDVLSILK 385
>UNIPROTKB|E1C9G0 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:RAYKGWQ
EMBL:AADN02041257 EMBL:AADN02041258 EMBL:AADN02041259
EMBL:AADN02041260 IPI:IPI00679513 Ensembl:ENSGALT00000023376
Uniprot:E1C9G0
Length = 1380
Score = 668 (240.2 bits), Expect = 6.2e-129, Sum P(5) = 6.2e-129
Identities = 148/376 (39%), Positives = 226/376 (60%)
Query: 549 QSLSCWNPDSIGFNLIEHVLCHIVKKER---PGAVLVFMTGWDDINSLKDQLQAHPLLGD 605
+++S + D + LIE +L IV + PGAVL+F+ G +I L +QLQ++ L +
Sbjct: 809 KTMSVMDLDKVNLELIEALLEWIVDGKHSYPPGAVLIFLPGLAEIKMLYEQLQSNALFNN 868
Query: 606 --PSRVLLLACHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAK 663
R ++ H S++S EQ+ +F +P GV KI+++TN+AETS+TI+DVV+VID GK K
Sbjct: 869 RHSKRCVVYPLHSSLSSEEQQSVFLRPPAGVIKIIISTNIAETSVTIDDVVYVIDSGKMK 928
Query: 664 ETSYDALNNTPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYD-AFADYQLPELL 722
E YD L +++S+ V G C+HL+ + Y+ QLPE+
Sbjct: 929 EKRYDPSKGMESLEDTFVSRANALQRKGRAGRVASGVCFHLFSSHHYNHQLIKQQLPEIQ 988
Query: 723 RTPLQSLCLQIKSLQL---GSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVL 779
R PL+ LCL+IK L++ S+ LSR ++PP S++ + LQ +GAL +E LT L
Sbjct: 989 RVPLEQLCLRIKILEMFSAQSLHSVLSRLIEPPRTESLRASKLRLQDLGALTADEKLTPL 1048
Query: 780 GRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFS 839
G +L+ LPV+ ++GK+++ G IF CLDP +T+ A L+ + PF+ P+DK++ A K F+
Sbjct: 1049 GYHLASLPVDVRIGKLMLFGTIFRCLDPALTIAASLAFKSPFVSPWDKREEANKKKLDFA 1108
Query: 840 ARDYSDHLALVRAYDGWK--DAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAG 897
+ SD+LAL++AY GW+ E Q+ Y YC +NFLS + L+ I SL++QF LL D G
Sbjct: 1109 VGN-SDYLALLQAYKGWRLSTKEGSQASYNYCRENFLSGRVLQEIASLKRQFTELLSDIG 1167
Query: 898 LVD---RNTENCNKWS 910
V R + KWS
Sbjct: 1168 FVKEGLRARDIERKWS 1183
Score = 560 (202.2 bits), Expect = 6.2e-129, Sum P(5) = 6.2e-129
Identities = 119/270 (44%), Positives = 167/270 (61%)
Query: 288 QKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAAC 347
Q ML R+ LP+++ER+ +L ++ +QV+VVSG TGCGKTTQ+PQ+IL++ + + A
Sbjct: 528 QSMLHERQKLPAWQERETILDLLTSHQVLVVSGMTGCGKTTQIPQFILDASLQGSPNAVA 587
Query: 348 SIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXX 407
+IICTQPRRISA++V+ERVA ER E++G +VGY++RLE +K TRL++CTTG+
Sbjct: 588 NIICTQPRRISAISVAERVAKERTERVGVTVGYQIRLESVKSSATRLLYCTTGVLLRRLE 647
Query: 408 XXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGG 467
G+THVIVDE+HER DFLL+V MSATLNAELFS YF
Sbjct: 648 GDLTLQGITHVIVDEVHERTEESDFLLLVLKDIMVQRPDLRIILMSATLNAELFSQYFHS 707
Query: 468 APMLHIPGFTYPVRAYFLENILEMTRYRLNTYNQIDDYGQEKSWKMQKQALALRKRKSSI 527
P+++IPG T+PV +FLE+++ MTRY L D + K + + A KR +
Sbjct: 708 CPIINIPGRTFPVDQFFLEDVIAMTRYVLE-----DSSPYRRKTKQENKVTARHKRTAF- 761
Query: 528 ASAVEDALEAADFREYSVQTQQSLSCWNPD 557
VE+ L A E T ++ +PD
Sbjct: 762 -EEVEEDLRHAGLLE---DTDTAVKDSDPD 787
Score = 111 (44.1 bits), Expect = 6.2e-129, Sum P(5) = 6.2e-129
Identities = 26/70 (37%), Positives = 39/70 (55%)
Query: 927 GLCSVVNKEKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGV 986
G + K + + T DG V ++ +SVN P+LV++EKIK + VF+RD + V
Sbjct: 1235 GAVKMQPKAEELKFVTKNDGYVHIHPSSVNYQTRHFESPYLVYHEKIKTSRVFIRDCSMV 1294
Query: 987 SDSVLLLFGG 996
S L+L GG
Sbjct: 1295 SVYPLVLLGG 1304
Score = 63 (27.2 bits), Expect = 6.2e-129, Sum P(5) = 6.2e-129
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 897 GLVDRNTENCNKWSHDEHLIRAVICAGLFPGLCSVVNKE 935
G++D E N + + LI A++CA L+P + V E
Sbjct: 1188 GVLDATGEEANSNAENFKLISAMLCAALYPNVVQVKKPE 1226
Score = 44 (20.5 bits), Expect = 6.2e-129, Sum P(5) = 6.2e-129
Identities = 14/60 (23%), Positives = 30/60 (50%)
Query: 226 SQKYINASMSSLSNVGSTTNDEGLYEQQEQLVQNSVVRERILRQRSLQMHEKQQ--AWQE 283
++ Y+N LS + + Y + ++ +++ R +S+ +HE+Q+ AWQE
Sbjct: 486 NESYVNLK-KKLSRKYDV-HSKSTYNENVKICMQFRLKKSSRRFQSM-LHERQKLPAWQE 542
Score = 39 (18.8 bits), Expect = 2.0e-49, Sum P(3) = 2.0e-49
Identities = 8/22 (36%), Positives = 16/22 (72%)
Query: 970 NEKIKVNSVFLRDSTGVSDSVL 991
++K+ + +FL S+GV+ +VL
Sbjct: 787 DQKMNLTVLFLSFSSGVNKTVL 808
>UNIPROTKB|E2QX71 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026
OMA:RAYKGWQ EMBL:AAEX03010868 RefSeq:XP_540155.1
Ensembl:ENSCAFT00000010087 GeneID:483040 KEGG:cfa:483040
Uniprot:E2QX71
Length = 1382
Score = 660 (237.4 bits), Expect = 4.1e-128, Sum P(4) = 4.1e-128
Identities = 156/433 (36%), Positives = 256/433 (59%)
Query: 484 FLENILEMTRYRLNTYNQIDDYGQ-EKSWKMQKQALALRKRKSSIASAVEDA-LE----A 537
++ ++ +MT+ +L + + E+ ++ +L L+ + S+ AV D L+
Sbjct: 745 YMRSMKQMTKEKLKARRSRTAFEEVEEDLRL---SLHLQ-HQDSVKDAVPDQQLDFKQLL 800
Query: 538 ADFREYSVQTQQSLSCWNPDSIGFNLIEHVLCHIVKKER---PGAVLVFMTGWDDINSLK 594
A ++ S +++S + + + LIE +L IV + PGA+LVF+ G +I L
Sbjct: 801 ARYKGVSKSVIKTMSIMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLY 860
Query: 595 DQLQAHPLLGD--PSRVLLLACHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITIND 652
+QLQ++ L + R ++ H S++S EQ+ +F KP GV KI+++TN+AETSITI+D
Sbjct: 861 EQLQSNSLFNNRRSHRCVVHPLHSSLSSEEQQAVFVKPPVGVTKIIISTNIAETSITIDD 920
Query: 653 VVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYD- 711
VV+VID GK KE YDA L +++S+ V G C+HL+ + ++
Sbjct: 921 VVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHFNH 980
Query: 712 AFADYQLPELLRTPLQSLCLQIKSLQLGS---ISEFLSRALQPPEPLSVKNAIEYLQIIG 768
QLPE+ R PL+ LCL+IK L++ S + SR ++PP S++ + L+ +G
Sbjct: 981 QLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIEPPHTDSLRASKIRLRDLG 1040
Query: 769 ALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKK 828
AL +E LT LG +L+ LPV+ ++GK+++ G+IF CLDP +T+ A L+ + PF+ P+DKK
Sbjct: 1041 ALTPDEKLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPWDKK 1100
Query: 829 DLAESAKAQFSARDYSDHLALVRAYDGWKDA--ERHQSGYEYCWKNFLSAQTLKAIDSLR 886
+ A K +F+ + SD+LAL+RAY GW+ + E ++ Y YC +NFLS + L+ + SL+
Sbjct: 1101 EEANQKKLEFAFAN-SDYLALLRAYKGWQLSMKEGMRASYNYCRQNFLSGRVLQEMASLK 1159
Query: 887 KQFLFLLKDAGLV 899
+QF LL D G V
Sbjct: 1160 RQFTELLSDIGFV 1172
Score = 564 (203.6 bits), Expect = 4.1e-128, Sum P(4) = 4.1e-128
Identities = 117/253 (46%), Positives = 162/253 (64%)
Query: 282 QESPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEA 341
Q S + Q +L+ R+SLP+++ER+ +LK +SE+QV+V+SG TGCGKTTQ+PQ+IL+
Sbjct: 525 QASRQFQSILQERQSLPAWEERETILKLLSEHQVLVISGMTGCGKTTQIPQFILDDSLSG 584
Query: 342 ARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGI 401
+IICTQPRRISA++V+ERVA ER E++G +VGY++RLE +K TRL++CTTG+
Sbjct: 585 PPEKVANIICTQPRRISAISVAERVAKERTERVGLTVGYQIRLESVKSSATRLLYCTTGV 644
Query: 402 XXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELF 461
GVTH+IVDE+HER DFLL+V MSATLNAELF
Sbjct: 645 LLRRLEGDTSLQGVTHIIVDEVHERTEESDFLLLVLKDIVLQRPNLQVILMSATLNAELF 704
Query: 462 SSYFGGAPMLHIPGFTYPVRAYFLENILEMTRYRLNTYNQIDDYGQEKSWK-MQKQALAL 520
S YF P++ IPG T+PV +FLE+ + +TRY L D +S K M K+ L
Sbjct: 705 SEYFSSCPVITIPGRTFPVDQFFLEDAIAVTRYVLQ-----DGSPYMRSMKQMTKEKLKA 759
Query: 521 RKRKSSIASAVED 533
R+ +++ ED
Sbjct: 760 RRSRTAFEEVEED 772
Score = 119 (46.9 bits), Expect = 4.1e-128, Sum P(4) = 4.1e-128
Identities = 30/63 (47%), Positives = 40/63 (63%)
Query: 936 KSIALK--TMEDGQVLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVSDSVLLL 993
KS LK T DG V ++ +SVN V P+LV++EKIK + VF+RD + VS L+L
Sbjct: 1244 KSDELKFVTKNDGYVHIHPSSVNYQVRHFDSPYLVYHEKIKTSRVFIRDCSMVSVYPLVL 1303
Query: 994 FGG 996
FGG
Sbjct: 1304 FGG 1306
Score = 67 (28.6 bits), Expect = 4.1e-128, Sum P(4) = 4.1e-128
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 897 GLVDRNTENCNKWSHDEHLIRAVICAGLFPGLCSVVNKE 935
G++D E N + + LI A++CA L+P + V + E
Sbjct: 1190 GILDATGEEANSNAENPKLISAMLCAALYPNVVQVKSPE 1228
Score = 37 (18.1 bits), Expect = 6.1e-73, Sum P(4) = 6.1e-73
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 415 VTHVIVDEIHERGMNEDFLL 434
V HV V+E E+ E F L
Sbjct: 231 VAHVSVEECVEQRQEEAFAL 250
>UNIPROTKB|F1N1A2 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RAYKGWQ EMBL:DAAA02030601
EMBL:DAAA02030599 EMBL:DAAA02030600 IPI:IPI00709831
Ensembl:ENSBTAT00000019540 ArrayExpress:F1N1A2 Uniprot:F1N1A2
Length = 1382
Score = 652 (234.6 bits), Expect = 7.3e-127, Sum P(4) = 7.3e-127
Identities = 144/375 (38%), Positives = 229/375 (61%)
Query: 538 ADFREYSVQTQQSLSCWNPDSIGFNLIEHVLCHIVKKER-----PGAVLVFMTGWDDINS 592
A ++ S +++S + + + LIE +L IV + PGA+LVF+ G +I
Sbjct: 798 ARYQGVSKSVIKTMSVMDFEKVNLELIEALLEWIVDGKHSYPPDPGAILVFLPGLAEIKM 857
Query: 593 LKDQLQAHPLLGD--PSRVLLLACHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITI 650
L +QLQ++ L + +R ++ H S++S EQ+ +F KP GV KI+++TN+AETSITI
Sbjct: 858 LYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPMGVTKIIISTNIAETSITI 917
Query: 651 NDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVY 710
+DVV+VID GK KE YDA L +++S+ V G C+HL+ + +
Sbjct: 918 DDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHF 977
Query: 711 D-AFADYQLPELLRTPLQSLCLQIKSLQLGS---ISEFLSRALQPPEPLSVKNAIEYLQI 766
+ QLPE+ R PL+ LCL+IK L++ S + +R ++PP S++ + L+
Sbjct: 978 NHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFARLIEPPHADSLRASKIRLRD 1037
Query: 767 IGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFD 826
+GAL +E LT LG +L+ LPV+ ++GK+++ G+IF CLDP +T+ A L+ + PF+ P+D
Sbjct: 1038 LGALTPDETLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPWD 1097
Query: 827 KKDLAESAKAQFSARDYSDHLALVRAYDGWKDA--ERHQSGYEYCWKNFLSAQTLKAIDS 884
KK+ A K +F+ + SD+LAL+RAY GW+ + E ++ Y YC +NFLS + L+ + S
Sbjct: 1098 KKEEANQKKLEFAFAN-SDYLALLRAYKGWQLSMKEGMRASYNYCRQNFLSGRVLQEMAS 1156
Query: 885 LRKQFLFLLKDAGLV 899
L++QF LL D G V
Sbjct: 1157 LKRQFTELLSDIGFV 1171
Score = 564 (203.6 bits), Expect = 7.3e-127, Sum P(4) = 7.3e-127
Identities = 117/253 (46%), Positives = 162/253 (64%)
Query: 282 QESPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEA 341
Q S + Q +L+ R+SLP+++ER+ +LK +S++QV+VVSG TGCGKTTQ+PQ+IL+
Sbjct: 522 QASRQFQSVLQERQSLPAWEERENILKLLSKHQVLVVSGMTGCGKTTQIPQFILDDSLNG 581
Query: 342 ARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGI 401
+IICTQPRRISA++V+ERVA ER E++G +VGY++RLE +K TRL++CTTG+
Sbjct: 582 PPEKVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGV 641
Query: 402 XXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELF 461
GVTH+IVDE+HER DFLL+V MSATLNAELF
Sbjct: 642 LLRRLEGDTALQGVTHIIVDEVHERTEESDFLLLVLKDIVLQRPTLQVILMSATLNAELF 701
Query: 462 SSYFGGAPMLHIPGFTYPVRAYFLENILEMTRYRLNTYNQIDDYGQEKSWK-MQKQALAL 520
S YF P++ IPG T+PV +FLE+ + +TRY L D +S K M K+ L
Sbjct: 702 SEYFNSCPVITIPGRTFPVDQFFLEDAIAVTRYVLQ-----DGSPYARSMKQMSKEKLKA 756
Query: 521 RKRKSSIASAVED 533
R+ +++ ED
Sbjct: 757 RRSRTAFEEVEED 769
Score = 119 (46.9 bits), Expect = 7.3e-127, Sum P(4) = 7.3e-127
Identities = 30/63 (47%), Positives = 40/63 (63%)
Query: 936 KSIALK--TMEDGQVLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVSDSVLLL 993
KS LK T DG V ++ +SVN V P+LV++EKIK + VF+RD + VS L+L
Sbjct: 1244 KSDELKFVTKNDGYVHIHPSSVNYQVRHFDSPYLVYHEKIKTSRVFIRDCSMVSVYPLVL 1303
Query: 994 FGG 996
FGG
Sbjct: 1304 FGG 1306
Score = 67 (28.6 bits), Expect = 7.3e-127, Sum P(4) = 7.3e-127
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 897 GLVDRNTENCNKWSHDEHLIRAVICAGLFPGLCSVVNKE 935
G++D E N + + LI A++CA L+P + V + E
Sbjct: 1190 GILDATGEEANSNAENPKLISAMLCAALYPNVVQVKSPE 1228
Score = 43 (20.2 bits), Expect = 2.6e-72, Sum P(4) = 2.6e-72
Identities = 24/92 (26%), Positives = 37/92 (40%)
Query: 103 RYAYQDESSDDSDREFGSTQQQMCGSTLDNIDEWRWKLTMLLRNKDEQEVVSRAKKDRRD 162
RY QD S + S ++ + +E L + L +D+ V + D
Sbjct: 733 RYVLQDGSPYARSMKQMSKEKLKARRSRTAFEEVEEDLRLSLHLQDQDSVKDAVPDQQLD 792
Query: 163 FEQLSALATRMGLHSRQYAK---VVVFSKAPL 191
F+QL LA G+ S+ K V+ F K L
Sbjct: 793 FKQL--LARYQGV-SKSVIKTMSVMDFEKVNL 821
>UNIPROTKB|Q6P158 [details] [associations]
symbol:DHX57 "Putative ATP-dependent RNA helicase DHX57"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR009060 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS00690 PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
EMBL:AC018693 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AK057423 EMBL:BC053623 EMBL:BC060778
EMBL:BC065278 EMBL:BC131534 EMBL:AF283512 IPI:IPI00168885
IPI:IPI00399364 IPI:IPI00749029 RefSeq:NP_945314.1
UniGene:Hs.468226 ProteinModelPortal:Q6P158 SMR:Q6P158
IntAct:Q6P158 STRING:Q6P158 PhosphoSite:Q6P158 DMDM:94710252
PaxDb:Q6P158 PeptideAtlas:Q6P158 PRIDE:Q6P158
Ensembl:ENST00000295373 GeneID:90957 KEGG:hsa:90957 UCSC:uc002rre.3
UCSC:uc002rrg.3 CTD:90957 GeneCards:GC02M039025 HGNC:HGNC:20086
HPA:HPA036160 neXtProt:NX_Q6P158 PharmGKB:PA134919698
HOVERGEN:HBG080658 InParanoid:Q6P158 KO:K13026 OMA:RAYKGWQ
OrthoDB:EOG4ZS929 PhylomeDB:Q6P158 ChiTaRS:DHX57 GenomeRNAi:90957
NextBio:77048 ArrayExpress:Q6P158 Bgee:Q6P158 CleanEx:HS_DHX57
Genevestigator:Q6P158 GermOnline:ENSG00000163214 Uniprot:Q6P158
Length = 1386
Score = 670 (240.9 bits), Expect = 5.6e-125, Sum P(3) = 5.6e-125
Identities = 155/429 (36%), Positives = 249/429 (58%)
Query: 538 ADFREYSVQTQQSLSCWNPDSIGFNLIEHVLCHIVKKER---PGAVLVFMTGWDDINSLK 594
A ++ S +++S + + + LIE +L IV + PGA+LVF+ G +I L
Sbjct: 805 ARYKGVSKSVIKTMSIMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLY 864
Query: 595 DQLQAHPLLGD--PSRVLLLACHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITIND 652
+QLQ++ L + +R ++ H S++S EQ+ +F KP GV KI+++TN+AETSITI+D
Sbjct: 865 EQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDD 924
Query: 653 VVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYD- 711
VV+VID GK KE YDA L +++S+ V G C+HL+ + Y+
Sbjct: 925 VVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNH 984
Query: 712 AFADYQLPELLRTPLQSLCLQIKSLQLGS---ISEFLSRALQPPEPLSVKNAIEYLQIIG 768
QLPE+ R PL+ LCL+IK L++ S + SR ++PP S++ + L+ +G
Sbjct: 985 QLLKQQLPEIQRVPLEQLCLRIKILEMFSAHNLQSVFSRLIEPPHTDSLRASKIRLRDLG 1044
Query: 769 ALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKK 828
AL +E LT LG +L+ LPV+ ++GK+++ G+IF CLDP +T+ A L+ + PF+ P+DKK
Sbjct: 1045 ALTPDERLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPWDKK 1104
Query: 829 DLAESAKAQFSARDYSDHLALVRAYDGWKDAERH--QSGYEYCWKNFLSAQTLKAIDSLR 886
+ A K +F+ + SD+LAL++AY GW+ + + ++ Y YC +NFLS + L+ + SL+
Sbjct: 1105 EEANQKKLEFAFAN-SDYLALLQAYKGWQLSTKEGVRASYNYCRQNFLSGRVLQEMASLK 1163
Query: 887 KQFLFLLKDAG--------------------LVDRNTENCNKWSHDEHLIRAVICAGLFP 926
+QF LL D G ++D E N + + LI A++CA L+P
Sbjct: 1164 RQFTELLSDIGFAREGLRAREIEKRAQGGDGVLDATGEEANSNAENPKLISAMLCAALYP 1223
Query: 927 GLCSVVNKE 935
+ V + E
Sbjct: 1224 NVVQVKSPE 1232
Score = 550 (198.7 bits), Expect = 5.6e-125, Sum P(3) = 5.6e-125
Identities = 113/253 (44%), Positives = 160/253 (63%)
Query: 282 QESPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEA 341
Q S + Q +L+ R+SLP+++ER+ +L + ++QVVV+SG TGCGKTTQ+PQ+IL+
Sbjct: 529 QASRQFQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSLNG 588
Query: 342 ARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGI 401
+IICTQPRRISA++V+ERVA ER E++G +VGY++RLE +K TRL++CTTG+
Sbjct: 589 PPEKVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGV 648
Query: 402 XXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELF 461
GV+H+IVDE+HER DFLL+V MSATLNAELF
Sbjct: 649 LLRRLEGDTALQGVSHIIVDEVHERTEESDFLLLVLKDIVSQRPGLQVILMSATLNAELF 708
Query: 462 SSYFGGAPMLHIPGFTYPVRAYFLENILEMTRYRLNTYNQIDDYGQEKSWK-MQKQALAL 520
S YF P++ IPG T+PV +FLE+ + +TRY L D +S K + K+ L
Sbjct: 709 SDYFNSCPVITIPGRTFPVDQFFLEDAIAVTRYVLQ-----DGSPYMRSMKQISKEKLKA 763
Query: 521 RKRKSSIASAVED 533
R+ +++ ED
Sbjct: 764 RRNRTAFEEVEED 776
Score = 118 (46.6 bits), Expect = 5.6e-125, Sum P(3) = 5.6e-125
Identities = 29/63 (46%), Positives = 40/63 (63%)
Query: 936 KSIALK--TMEDGQVLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVSDSVLLL 993
KS LK T DG V ++ +SVN V P+L+++EKIK + VF+RD + VS L+L
Sbjct: 1248 KSAELKFVTKNDGYVHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIRDCSMVSVYPLVL 1307
Query: 994 FGG 996
FGG
Sbjct: 1308 FGG 1310
Score = 40 (19.1 bits), Expect = 2.2e-71, Sum P(3) = 2.2e-71
Identities = 12/55 (21%), Positives = 25/55 (45%)
Query: 258 QNSVVRERILRQRSLQMHEKQQAWQESPEGQKMLEFRRSLPSYKE-RDALLKAIS 311
+N E + L +H + Q + + L+F++ L YK +++K +S
Sbjct: 765 RNRTAFEEVEEDLRLSLHLQDQDSVKDAVPDQQLDFKQLLARYKGVSKSVIKTMS 819
Score = 39 (18.8 bits), Expect = 2.8e-71, Sum P(3) = 2.8e-71
Identities = 16/66 (24%), Positives = 25/66 (37%)
Query: 103 RYAYQDESSDDSDREFGSTQQQMCGSTLDNIDEWRWKLTMLLRNKDEQEVVSRAKKDRRD 162
RY QD S + S ++ +E L + L +D+ V + D
Sbjct: 740 RYVLQDGSPYMRSMKQISKEKLKARRNRTAFEEVEEDLRLSLHLQDQDSVKDAVPDQQLD 799
Query: 163 FEQLSA 168
F+QL A
Sbjct: 800 FKQLLA 805
>TAIR|locus:2009200 [details] [associations]
symbol:NIH "nuclear DEIH-boxhelicase" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003678
"DNA helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006259 "DNA metabolic process" evidence=ISS]
InterPro:IPR002110 InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0008026 IPI:IPI00521146 RefSeq:NP_172152.1 UniGene:At.20810
PRIDE:F4IDQ6 EnsemblPlants:AT1G06670.1 GeneID:837177
KEGG:ath:AT1G06670 OMA:GNMEENT Uniprot:F4IDQ6
Length = 1576
Score = 746 (267.7 bits), Expect = 7.6e-124, Sum P(2) = 7.6e-124
Identities = 166/499 (33%), Positives = 273/499 (54%)
Query: 517 ALALRKRKSSIASAVEDALEAADFREYSVQTQQSLSCW----NPDSIGFNLIEHVLCHIV 572
AL L ++++ +A A + + S Q Q L + P+ + LI ++ I
Sbjct: 511 ALELAEKENQFETAQIIREHAGNIQSNSQQAQDLLDKYMATIKPEEVDVGLIVKLMKKIC 570
Query: 573 KKERPGAVLVFMTGWDDINSLKDQLQAHPLLGDPSRVLLLACHGSMASSEQRLIFDKPED 632
+ GA+LVF+ GW++I+ K++L ++ ++L H + + EQ+ +F++P
Sbjct: 571 SDSKDGAILVFLPGWEEISKTKEKLLDDRFFAHSAKFIILCLHSRVPAEEQKKVFNRPPR 630
Query: 633 GVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXX 692
G RKIVLATN+AE+++TI+DVV+VID G+ KE SYD N+ L SW+SK
Sbjct: 631 GCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNDVSTLQSSWVSKANAKQRAGR 690
Query: 693 XXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLG-SISEFLSRALQP 751
Q G CYHLY + + +Y++PE++R P+ LCLQ+K L ++++FL + + P
Sbjct: 691 AGRCQAGICYHLYSKLRAASLPEYRVPEVMRMPVDELCLQVKMLDPNCNVNDFLQKLMDP 750
Query: 752 PEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTV 811
P S++NA+ L+ IGAL E LT LG+ LPV P++ KM+ + NCLDP + +
Sbjct: 751 PVAQSIENALIILKDIGALTPEEELTELGQKFGQLPVHPRISKMIYFAILVNCLDPALIL 810
Query: 812 VAGLSVRDPFLMPFDKKDLAESAKAQFSAR----DYSDHLALVRAYDGWKDAERHQSGYE 867
+DPF MP D ++A A+ D+SDHLA V A+ WK+A+ E
Sbjct: 811 ACAADEKDPFTMPLSPGDRKKAAAAKHELASLYGDHSDHLATVAAFQCWKNAKASGQAKE 870
Query: 868 YCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDEHLIRAVICAGLFPG 927
+C K F+S +K +D L ++ L G++ ++ NC+ +HD ++RAVI GL+P
Sbjct: 871 FCSKYFISQVVMKRLDDLCRKLQGELNRHGVIPSSSSNCSLNAHDPGILRAVIAVGLYPM 930
Query: 928 L---CSVV-NKEKSIALKTMEDGQVLL--YSNSVNAGVPKIPYPWLVFNEKIKVN-SVFL 980
L C + N+ +S+ ++T+ +V + SN+V+ K +VF+E + + V +
Sbjct: 931 LGRMCPLSKNRTRSV-IETIAGAKVRVPSLSNNVDMSSTKFDEALIVFDEITRGDWGVVI 989
Query: 981 RDSTGVSDSVLLLFGGNIS 999
R T + +LLF I+
Sbjct: 990 RSCTVLPTIPVLLFSREIA 1008
Score = 515 (186.3 bits), Expect = 7.6e-124, Sum P(2) = 7.6e-124
Identities = 101/215 (46%), Positives = 141/215 (65%)
Query: 288 QKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAAC 347
+++ E R LP RDA++ A+ NQVV+++GETGCGKTTQ+PQY+L+ + + AC
Sbjct: 208 REIFEARSKLPIASFRDAIISAVESNQVVLIAGETGCGKTTQVPQYLLDHMWHSKK-EAC 266
Query: 348 SIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXX 407
IICTQPRRISA++VS+R++ ERGE +G +VGYKVRL+ GR++ ++FCT GI
Sbjct: 267 KIICTQPRRISAISVSDRISWERGETIGRTVGYKVRLQSEGGRESSVVFCTNGILLRVLI 326
Query: 408 XXXXXXGV---THVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSY 464
V TH+IVDEIHER DF+L++ MSATL+AE FS Y
Sbjct: 327 GKGVNSSVPDITHIIVDEIHERDSYSDFMLMILRDLLPSNPHLRLILMSATLDAERFSEY 386
Query: 465 FGGAPMLHIPGFTYPVRAYFLENILEMTRYRLNTY 499
FGG P++ +PGFTYPVR +FL++ L + N++
Sbjct: 387 FGGCPVVRVPGFTYPVRTFFLDDALSVLNSDKNSH 421
>UNIPROTKB|F1M8G5 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
RGD:1310340 NextBio:689608 IPI:IPI00391644
Ensembl:ENSRNOT00000037714 ArrayExpress:F1M8G5 Uniprot:F1M8G5
Length = 1338
Score = 669 (240.6 bits), Expect = 9.2e-124, Sum P(3) = 9.2e-124
Identities = 153/401 (38%), Positives = 241/401 (60%)
Query: 517 ALALRKRKSSIASAVEDALEAADFREYSVQTQ-------QSLSCWNPDSIGFNLIEHVLC 569
AL L+ + S+ + D + DF++ V+ + +++S + + + LIE +L
Sbjct: 731 ALHLQDEEESVKDTIPD--QQLDFKQLLVRYKGVSKSVIKTMSVMDFEKVNLELIEALLE 788
Query: 570 HIVKKER---PGAVLVFMTGWDDINSLKDQLQAHPLLGD--PSRVLLLACHGSMASSEQR 624
IV + PGA+LVF+ G +I L +QLQ++ L + R ++ H S++S EQ+
Sbjct: 789 WIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSLSSEEQQ 848
Query: 625 LIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKX 684
+F KP GV KI+++TN+AETSITI+DVV+VID GK KE YDA L +++S+
Sbjct: 849 AVFVKPPLGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQA 908
Query: 685 XXXXXXXXXXXVQPGECYHLYPRYVYD-AFADYQLPELLRTPLQSLCLQIKSLQLGS--- 740
V G C+HL+ + Y+ QLPE+ R PL+ LCL+IK L++ S
Sbjct: 909 NALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHN 968
Query: 741 ISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGA 800
+ SR ++PP S++ + L+ +GAL +E LT LG +L+ LPV+ ++GK+++LG+
Sbjct: 969 LQSVFSRLIEPPHVDSLRASKVRLRDLGALTPDEKLTPLGYHLASLPVDVRIGKLMLLGS 1028
Query: 801 IFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWK--D 858
IF CLDP +T+ A L+ + PF+ P+DKK+ A K +F+ + SD+LAL+ AY GW+
Sbjct: 1029 IFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFAN-SDYLALLCAYKGWQLST 1087
Query: 859 AERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLV 899
E ++ Y YC +NFLS +TL+ + SL++QF LL D G V
Sbjct: 1088 KESARASYNYCRQNFLSGRTLQEMASLKRQFTELLSDIGFV 1128
Score = 538 (194.4 bits), Expect = 9.2e-124, Sum P(3) = 9.2e-124
Identities = 119/272 (43%), Positives = 167/272 (61%)
Query: 279 QAWQESPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESE 338
Q Q S + +L+ R+ LP+++ER+ +LK +S++QVVV+SG TGCGKTTQ+PQ+IL++
Sbjct: 477 QMKQASRQFHAILQERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNS 536
Query: 339 TEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCT 398
+IICTQPRRISA++V+ERVA ER E++G +VGY++RLE +K TRL++CT
Sbjct: 537 LNGPPERVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCT 596
Query: 399 TGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNA 458
TG+ GVTH+IVDE+HER DFLL+V MSATL+A
Sbjct: 597 TGVLLRRLEGDATLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQVILMSATLDA 656
Query: 459 ELFSSYFGGAPMLHIPGFTYPVRAYFLENILEMTRYRLNTYNQIDDYGQEKSWK-MQKQA 517
LFS YF P++ IPG +PV +FLE+ L +TRY L D +S K + K+
Sbjct: 657 GLFSKYFSYCPVITIPGRAFPVDQFFLEDALAVTRYVLQ-----DGSPYMRSMKQIAKER 711
Query: 518 LALRKRKSSIASAVED---ALEAADFREYSVQ 546
L R ++++ ED AL D E SV+
Sbjct: 712 LKARHNRTALEEVEEDLRLALHLQD-EEESVK 742
Score = 119 (46.9 bits), Expect = 9.2e-124, Sum P(3) = 9.2e-124
Identities = 33/79 (41%), Positives = 45/79 (56%)
Query: 936 KSIALK--TMEDGQVLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVSDSVLLL 993
KS LK T DG V ++ +SVN V P+L+++EKIK + VF+RD + VS L+L
Sbjct: 1200 KSAELKFVTKNDGYVHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIRDCSMVSVYPLVL 1259
Query: 994 FGGN-----ISRGGLVSCL 1007
FGG + RG V L
Sbjct: 1260 FGGGQVSVQLQRGAFVVSL 1278
Score = 68 (29.0 bits), Expect = 2.2e-118, Sum P(3) = 2.2e-118
Identities = 20/58 (34%), Positives = 27/58 (46%)
Query: 897 GLVDRNTENCNKWSHDEHLIRAVICAGLFPGLCSVVNKEKSIALKTMEDGQVLLYSNS 954
G++D E N + + LI AV+CA L+P + V E KT G V L S
Sbjct: 1146 GVLDATGEEANTNAENPKLISAVLCAALYPNVVQVKTPEGKFQ-KT-SSGVVRLQPKS 1201
>UNIPROTKB|F1LSC4 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026 OMA:RAYKGWQ
IPI:IPI00369334 RefSeq:NP_001178836.1 UniGene:Rn.15951
Ensembl:ENSRNOT00000037705 GeneID:366532 KEGG:rno:366532
RGD:1310340 NextBio:689608 ArrayExpress:F1LSC4 Uniprot:F1LSC4
Length = 1391
Score = 669 (240.6 bits), Expect = 1.3e-123, Sum P(3) = 1.3e-123
Identities = 153/401 (38%), Positives = 241/401 (60%)
Query: 517 ALALRKRKSSIASAVEDALEAADFREYSVQTQ-------QSLSCWNPDSIGFNLIEHVLC 569
AL L+ + S+ + D + DF++ V+ + +++S + + + LIE +L
Sbjct: 784 ALHLQDEEESVKDTIPD--QQLDFKQLLVRYKGVSKSVIKTMSVMDFEKVNLELIEALLE 841
Query: 570 HIVKKER---PGAVLVFMTGWDDINSLKDQLQAHPLLGD--PSRVLLLACHGSMASSEQR 624
IV + PGA+LVF+ G +I L +QLQ++ L + R ++ H S++S EQ+
Sbjct: 842 WIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSLSSEEQQ 901
Query: 625 LIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKX 684
+F KP GV KI+++TN+AETSITI+DVV+VID GK KE YDA L +++S+
Sbjct: 902 AVFVKPPLGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQA 961
Query: 685 XXXXXXXXXXXVQPGECYHLYPRYVYD-AFADYQLPELLRTPLQSLCLQIKSLQLGS--- 740
V G C+HL+ + Y+ QLPE+ R PL+ LCL+IK L++ S
Sbjct: 962 NALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHN 1021
Query: 741 ISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGA 800
+ SR ++PP S++ + L+ +GAL +E LT LG +L+ LPV+ ++GK+++LG+
Sbjct: 1022 LQSVFSRLIEPPHVDSLRASKVRLRDLGALTPDEKLTPLGYHLASLPVDVRIGKLMLLGS 1081
Query: 801 IFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWK--D 858
IF CLDP +T+ A L+ + PF+ P+DKK+ A K +F+ + SD+LAL+ AY GW+
Sbjct: 1082 IFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFAN-SDYLALLCAYKGWQLST 1140
Query: 859 AERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLV 899
E ++ Y YC +NFLS +TL+ + SL++QF LL D G V
Sbjct: 1141 KESARASYNYCRQNFLSGRTLQEMASLKRQFTELLSDIGFV 1181
Score = 538 (194.4 bits), Expect = 1.3e-123, Sum P(3) = 1.3e-123
Identities = 119/272 (43%), Positives = 167/272 (61%)
Query: 279 QAWQESPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESE 338
Q Q S + +L+ R+ LP+++ER+ +LK +S++QVVV+SG TGCGKTTQ+PQ+IL++
Sbjct: 530 QMKQASRQFHAILQERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNS 589
Query: 339 TEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCT 398
+IICTQPRRISA++V+ERVA ER E++G +VGY++RLE +K TRL++CT
Sbjct: 590 LNGPPERVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCT 649
Query: 399 TGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNA 458
TG+ GVTH+IVDE+HER DFLL+V MSATL+A
Sbjct: 650 TGVLLRRLEGDATLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQVILMSATLDA 709
Query: 459 ELFSSYFGGAPMLHIPGFTYPVRAYFLENILEMTRYRLNTYNQIDDYGQEKSWK-MQKQA 517
LFS YF P++ IPG +PV +FLE+ L +TRY L D +S K + K+
Sbjct: 710 GLFSKYFSYCPVITIPGRAFPVDQFFLEDALAVTRYVLQ-----DGSPYMRSMKQIAKER 764
Query: 518 LALRKRKSSIASAVED---ALEAADFREYSVQ 546
L R ++++ ED AL D E SV+
Sbjct: 765 LKARHNRTALEEVEEDLRLALHLQD-EEESVK 795
Score = 119 (46.9 bits), Expect = 1.3e-123, Sum P(3) = 1.3e-123
Identities = 33/79 (41%), Positives = 45/79 (56%)
Query: 936 KSIALK--TMEDGQVLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVSDSVLLL 993
KS LK T DG V ++ +SVN V P+L+++EKIK + VF+RD + VS L+L
Sbjct: 1253 KSAELKFVTKNDGYVHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIRDCSMVSVYPLVL 1312
Query: 994 FGGN-----ISRGGLVSCL 1007
FGG + RG V L
Sbjct: 1313 FGGGQVSVQLQRGAFVVSL 1331
Score = 68 (29.0 bits), Expect = 3.0e-118, Sum P(3) = 3.0e-118
Identities = 20/58 (34%), Positives = 27/58 (46%)
Query: 897 GLVDRNTENCNKWSHDEHLIRAVICAGLFPGLCSVVNKEKSIALKTMEDGQVLLYSNS 954
G++D E N + + LI AV+CA L+P + V E KT G V L S
Sbjct: 1199 GVLDATGEEANTNAENPKLISAVLCAALYPNVVQVKTPEGKFQ-KT-SSGVVRLQPKS 1254
>MGI|MGI:2145374 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2145374
GO:GO:0005739 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 HOGENOM:HOG000247063
HOVERGEN:HBG081436 OMA:WLLYQEK OrthoDB:EOG43FGW2 EMBL:BC057112
EMBL:BC082319 EMBL:AK028342 EMBL:AK042066 EMBL:AK042497
EMBL:AK049530 IPI:IPI00410936 RefSeq:NP_766182.2 UniGene:Mm.35094
ProteinModelPortal:Q6PGC1 SMR:Q6PGC1 STRING:Q6PGC1
PhosphoSite:Q6PGC1 PaxDb:Q6PGC1 PRIDE:Q6PGC1
Ensembl:ENSMUST00000038574 GeneID:218629 KEGG:mmu:218629
UCSC:uc007rwx.1 GeneTree:ENSGT00550000074257 InParanoid:Q6PGC1
NextBio:376359 Bgee:Q6PGC1 CleanEx:MM_DHX29 Genevestigator:Q6PGC1
GermOnline:ENSMUSG00000042426 Uniprot:Q6PGC1
Length = 1365
Score = 1194 (425.4 bits), Expect = 1.5e-123, Sum P(2) = 1.5e-123
Identities = 277/747 (37%), Positives = 427/747 (57%)
Query: 282 QESPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEA 341
Q +P+ Q++L+ R+ LP +K RD++++ + ++VVVV+GETG GK+TQ+P ++LE
Sbjct: 556 QSTPKYQRLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLD 615
Query: 342 ARGAA-CSIICTQPRRISAMAVSERVAAERGEKLGES-----VGYKVRLEGMKGRDTRLM 395
GA C+I+CTQPRRISA++++ RV E G + G GY++R+E TRL+
Sbjct: 616 ECGARKCNIVCTQPRRISAVSLATRVCEELGCESGPGGRNSLCGYQIRMESRASESTRLL 675
Query: 396 FCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSAT 455
+CTTG+ V+HVIVDE+HER + DFLL++ MSAT
Sbjct: 676 YCTTGVLLRKLQEDGLLADVSHVIVDEVHERSVQSDFLLVILKEILQKRSDLHLILMSAT 735
Query: 456 LNAELFSSYFGGAPMLHIPGFTYPVRAYFLENILEMTRYRL---NTYNQ-IDDYGQEKSW 511
++++ FS+YF P+L I G +YPV + LE+I+E T + L + Y Q + +E +
Sbjct: 736 VDSDKFSTYFTHCPILRISGRSYPVEVFHLEDIVEETGFVLEKDSEYCQKFLEEEEEITI 795
Query: 512 KMQKQALALRKRKSSIASAVEDALEAADF-REYSVQTQQSLSCWNPDSIGFNLIEHVLCH 570
+ +A ++K + I + E F ++YS +TQ ++ NP I +LI +L +
Sbjct: 796 NVTSKAGGVKKYQEYIPVQSGASPELNPFYQKYSSRTQHAILYMNPHKINLDLILELLVY 855
Query: 571 IVKKER----PGAVLVFMTGWDDINSLKDQLQAHPLLGDPSRVLLLACHGSMASSEQRLI 626
+ K + GAVL+F+ G I L D L + R ++A H +++ +Q
Sbjct: 856 LDKSPQFRNIEGAVLIFLPGLAHIQQLYDLLSSDRRFYS-ERYQVIALHSVLSTQDQAAA 914
Query: 627 FDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXX 686
F P GVRKIVLATN+AET ITI DVVFVID G+ KE Y + L+ +++SK
Sbjct: 915 FMFPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASA 974
Query: 687 XXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLS 746
V+ G C+ LY R ++ F DY +PE+LR PL+ LCL I LGS +FLS
Sbjct: 975 LQRQGRAGRVRDGFCFRLYTRERFEGFLDYSVPEILRVPLEELCLHIMKCDLGSPEDFLS 1034
Query: 747 RALQPPEPLSVKNAIEYLQIIGALDENE-NLTVLGRNLSMLPVEPKLGKMLILGAIFNCL 805
+AL PP+ + NA+ L+ IGA + NE LT LG++L+ LPV K+GKMLI GAIF CL
Sbjct: 1035 KALDPPQLQVISNAMNLLRKIGACEPNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCL 1094
Query: 806 DPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERH--- 862
+PV T+ A ++ + PF+ P +KD A+ AK+ + D SDHL + AY GWK A++
Sbjct: 1095 EPVATLAAVMTEKSPFITPIGRKDEADLAKSSLAVAD-SDHLTIYNAYLGWKKAQQEGGF 1153
Query: 863 QSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSH-----DEHLIR 917
+S YC +NFL+ +L ++ ++++ + L+K AG + K D L++
Sbjct: 1154 RSEISYCQRNFLNRTSLLTLEDVKQELMKLVKAAGFSSSPSWEGRKGPQTLSFQDIALLK 1213
Query: 918 AVICAGLFPG----LC--SVVNKEKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFNE 971
AV+ AGL+ +C SV EK + G+ ++ +SVN + Y WL++ E
Sbjct: 1214 AVLAAGLYDSVGKIMCTKSVDVTEKLACMVETAQGKAQVHPSSVNRDLQT--YGWLLYQE 1271
Query: 972 KIKVNSVFLRDSTGVSDSVLLLFGGNI 998
K++ V+LR++T ++ +LLFGG+I
Sbjct: 1272 KVRYTRVYLRETTLITPFPVLLFGGDI 1298
Score = 41 (19.5 bits), Expect = 1.5e-123, Sum P(2) = 1.5e-123
Identities = 11/50 (22%), Positives = 23/50 (46%)
Query: 140 LTMLLRNKDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQ--YAKVVVFS 187
L +++ NK EQ ++ + ++ A++ R+ Q Y + FS
Sbjct: 84 LKVVINNKLEQRIIGVINEHKKQNSDRGAISGRLSAKKLQDLYMALQAFS 133
>MGI|MGI:2147067 [details] [associations]
symbol:Dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
MGI:MGI:2147067 GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 HOVERGEN:HBG080658 KO:K13026
OMA:RAYKGWQ OrthoDB:EOG4ZS929 EMBL:AK035344 EMBL:AK053628
EMBL:AK162192 EMBL:BC026474 EMBL:BC062952 EMBL:BC065169
EMBL:BC066091 IPI:IPI00420351 IPI:IPI00453609 IPI:IPI00752611
IPI:IPI00753147 IPI:IPI00755243 RefSeq:NP_001157231.1
RefSeq:NP_945180.2 UniGene:Mm.12412 ProteinModelPortal:Q6P5D3
SMR:Q6P5D3 PhosphoSite:Q6P5D3 PaxDb:Q6P5D3 PRIDE:Q6P5D3
Ensembl:ENSMUST00000038166 Ensembl:ENSMUST00000086555 GeneID:106794
KEGG:mmu:106794 UCSC:uc008dqx.2 UCSC:uc008dqy.2 UCSC:uc008dqz.2
UCSC:uc008dra.2 UCSC:uc008drb.1 InParanoid:Q6P5D3 NextBio:358388
Bgee:Q6P5D3 CleanEx:MM_DHX57 Genevestigator:Q6P5D3
GermOnline:ENSMUSG00000035051 Uniprot:Q6P5D3
Length = 1388
Score = 668 (240.2 bits), Expect = 9.8e-123, Sum P(3) = 9.8e-123
Identities = 154/411 (37%), Positives = 246/411 (59%)
Query: 507 QEKSWKMQKQALALRKRKSSIASAVEDALEAADFREYSVQTQ-------QSLSCWNPDSI 559
QE+ + + +L L+ + S+ + D + DF++ ++ + +++S + + +
Sbjct: 771 QEEVEEDLRLSLHLQDEEESVKDTIPD--QQLDFKQLLIRYKGVSKSVIKTMSVMDFEKV 828
Query: 560 GFNLIEHVLCHIVKKER---PGAVLVFMTGWDDINSLKDQLQAHPLLGD--PSRVLLLAC 614
LIE +L IV + PGAVLVF+ G +I L +QLQ++ L + R ++
Sbjct: 829 NLELIEALLEWIVDGKHAYPPGAVLVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPL 888
Query: 615 HGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTP 674
H S++S EQ+ +F KP GV KI+++TN+AETSITI+DVV+VID GK KE YDA
Sbjct: 889 HSSLSSEEQQAVFVKPPMGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGME 948
Query: 675 CLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYD-AFADYQLPELLRTPLQSLCLQI 733
L +++S+ V G C+HL+ + Y+ QLPE+ R PL+ LCL+I
Sbjct: 949 SLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRI 1008
Query: 734 KSLQLGS---ISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEP 790
K L++ S + SR ++PP S++ + L+ +GAL +E LT LG +L+ LPV+
Sbjct: 1009 KILEMFSTHNLQSVFSRLIEPPHIDSLRASKVRLRDLGALTPDEKLTPLGYHLASLPVDV 1068
Query: 791 KLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALV 850
++GK+++LG+IF CLDP +T+ A L+ + PF+ P+DKK+ A K +F+ + SD+LAL+
Sbjct: 1069 RIGKLMLLGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFAN-SDYLALL 1127
Query: 851 RAYDGWK--DAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLV 899
AY GW+ E ++ Y YC +NFLS +TL+ + SL++QF LL D G V
Sbjct: 1128 CAYKGWQLSTKESARASYNYCRQNFLSGRTLQEMASLKRQFTELLSDIGFV 1178
Score = 531 (192.0 bits), Expect = 9.8e-123, Sum P(3) = 9.8e-123
Identities = 113/256 (44%), Positives = 159/256 (62%)
Query: 279 QAWQESPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESE 338
Q Q S + +L+ R+ LP+++ER+ +LK +S++QVVV+SG TGCGKTTQ+PQ+IL++
Sbjct: 527 QMKQASRQFHAILQERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNS 586
Query: 339 TEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCT 398
+IICTQPRRISA++V+ERVA ER E++G +VGY++RLE +K TRL++CT
Sbjct: 587 LNGPPERVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCT 646
Query: 399 TGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNA 458
TG+ GVTH+IVDE+HER DFLL+V MSATL+A
Sbjct: 647 TGVLLRRLEGDATLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQVILMSATLDA 706
Query: 459 ELFSSYFGGAPMLHIPGFTYPVRAYFLENILEMTRYRLNTYNQIDDYGQEKSWK-MQKQA 517
LFS YF P++ IPG +PV +FLE+ L +TRY L D +S K + K+
Sbjct: 707 GLFSKYFSYCPVITIPGRAFPVDQFFLEDALAVTRYVLQ-----DGSPYMRSMKQIAKEK 761
Query: 518 LALRKRKSSIASAVED 533
L R +++ ED
Sbjct: 762 LKARHNRTAQEEVEED 777
Score = 119 (46.9 bits), Expect = 9.8e-123, Sum P(3) = 9.8e-123
Identities = 33/79 (41%), Positives = 45/79 (56%)
Query: 936 KSIALK--TMEDGQVLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVSDSVLLL 993
KS LK T DG V ++ +SVN V P+L+++EKIK + VF+RD + VS L+L
Sbjct: 1250 KSAELKFVTKNDGYVHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIRDCSMVSVYPLVL 1309
Query: 994 FGGN-----ISRGGLVSCL 1007
FGG + RG V L
Sbjct: 1310 FGGGQVNVQLQRGAFVVSL 1328
Score = 68 (29.0 bits), Expect = 2.3e-117, Sum P(3) = 2.3e-117
Identities = 20/58 (34%), Positives = 27/58 (46%)
Query: 897 GLVDRNTENCNKWSHDEHLIRAVICAGLFPGLCSVVNKEKSIALKTMEDGQVLLYSNS 954
G++D E N + + LI AV+CA L+P + V E KT G V L S
Sbjct: 1196 GVLDATGEEANTNAENPKLISAVLCAALYPNVVQVKTPEGKFQ-KT-SSGVVRLQPKS 1251
>RGD|2318361 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:2318361
GO:GO:0005739 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OrthoDB:EOG43FGW2 GeneTree:ENSGT00550000074257
IPI:IPI00372028 Ensembl:ENSRNOT00000013854 Uniprot:D3ZHW0
Length = 1366
Score = 1185 (422.2 bits), Expect = 3.5e-122, Sum P(2) = 3.5e-122
Identities = 275/747 (36%), Positives = 427/747 (57%)
Query: 282 QESPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEA 341
Q +P+ Q++L+ R+ LP +K R ++++ + ++VVVV+GETG GK+TQ+P ++LE
Sbjct: 557 QSTPKYQRLLKERQQLPVFKHRASIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLN 616
Query: 342 ARGAA-CSIICTQPRRISAMAVSERVAAERGEKLGES-----VGYKVRLEGMKGRDTRLM 395
GA C+I+CTQPRRISA++++ RV E G + G GY++R+E TRL+
Sbjct: 617 DCGARKCNIVCTQPRRISAVSLATRVCEELGCEGGPGGRNSLCGYQIRMESRASESTRLL 676
Query: 396 FCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSAT 455
+CTTG+ V+HVIVDE+HER + DFLL++ MSAT
Sbjct: 677 YCTTGVLLRKLQEDGLLADVSHVIVDEVHERSVQSDFLLVILKEILQKRSDLHLILMSAT 736
Query: 456 LNAELFSSYFGGAPMLHIPGFTYPVRAYFLENILEMTRYRL---NTYNQ-IDDYGQEKSW 511
++++ FS+YF P+L I G +YPV + LE+I+E T + L + Y Q + +E +
Sbjct: 737 VDSDKFSTYFTHCPILRISGRSYPVEVFHLEDIVEETGFILEKDSEYCQKFLEEEEEITI 796
Query: 512 KMQKQALALRKRKSSIASAVEDALEAADF-REYSVQTQQSLSCWNPDSIGFNLIEHVLCH 570
+ +A ++K + I + E + F ++YS +TQ ++ NP I +LI +L +
Sbjct: 797 NVTSKAGGIKKYQECIPVQSGASPELSPFYQKYSSRTQYAVLYMNPHKINLDLILELLVY 856
Query: 571 IVKKER----PGAVLVFMTGWDDINSLKDQLQAHPLLGDPSRVLLLACHGSMASSEQRLI 626
+ K + GAVL+F+ G I L D L R L+A H +++ +Q
Sbjct: 857 LDKSPQFRNIEGAVLIFLPGLAHIQQLYDLLSNDRRFYS-ERYQLIALHSVLSTQDQAAA 915
Query: 627 FDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXX 686
F P GVRKIVLATN+AET ITI DVVFVID G+ KE Y + L+ +++SK
Sbjct: 916 FMLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASA 975
Query: 687 XXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLS 746
V+ G C+ LY R ++ F +Y +PE+LR PL+ LCL I LGS +FLS
Sbjct: 976 LQRQGRAGRVRDGFCFRLYTRERFEGFLEYSVPEILRVPLEELCLHIMKCDLGSPEDFLS 1035
Query: 747 RALQPPEPLSVKNAIEYLQIIGALDENE-NLTVLGRNLSMLPVEPKLGKMLILGAIFNCL 805
+AL PP+P + NA+ L+ IGA + +E LT LG++L+ LPV K+GKMLI GAIF CL
Sbjct: 1036 KALDPPQPQVISNAMNLLRKIGACEPSEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCL 1095
Query: 806 DPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERH--- 862
+PV T+ A ++ + PF+ P +KD A+ AK+ + D SDHL + AY GWK A++
Sbjct: 1096 EPVATLAAVMTEKSPFITPIGRKDEADLAKSSLAVAD-SDHLTIYNAYLGWKKAQQEGGF 1154
Query: 863 QSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSH-----DEHLIR 917
+S YC +NFL+ +L ++ ++++ + L++ AG + K D L++
Sbjct: 1155 RSEISYCQRNFLNRTSLLTLEDVKQELMKLVRAAGFSSSTSWEGKKGPQALSFQDIALLK 1214
Query: 918 AVICAGLFPG----LC--SVVNKEKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFNE 971
AV+ AGL+ +C SV EK + G+ ++ +SVN + Y WL++ E
Sbjct: 1215 AVLAAGLYDSVGKIMCTKSVDVTEKLACMVETAQGKAQVHPSSVNRDLQT--YGWLLYQE 1272
Query: 972 KIKVNSVFLRDSTGVSDSVLLLFGGNI 998
K++ V+LR++T ++ +LLFGG+I
Sbjct: 1273 KVRYARVYLRETTLITPFPVLLFGGDI 1299
Score = 37 (18.1 bits), Expect = 3.5e-122, Sum P(2) = 3.5e-122
Identities = 10/50 (20%), Positives = 22/50 (44%)
Query: 140 LTMLLRNKDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQ--YAKVVVFS 187
L +++ NK EQ ++ + ++ ++ R+ Q Y + FS
Sbjct: 84 LKVVINNKLEQRIIGVINEHKKQNNDRGVISGRLSAKKLQDLYMALQAFS 133
>UNIPROTKB|E1C388 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AADN02054528 EMBL:AADN02054529
EMBL:AADN02054530 IPI:IPI00580778 RefSeq:XP_424728.2
UniGene:Gga.12357 Ensembl:ENSGALT00000023700 GeneID:427136
KEGG:gga:427136 NextBio:20828443 Uniprot:E1C388
Length = 1372
Score = 1161 (413.8 bits), Expect = 1.4e-120, Sum P(2) = 1.4e-120
Identities = 271/747 (36%), Positives = 416/747 (55%)
Query: 282 QESPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEA 341
Q S QK L+ R+ LP +K R ++++ + +++VVVV+GETG GK+TQ+P ++LE
Sbjct: 559 QSSSRYQKFLKERQELPVFKHRHSIVETLKKHRVVVVAGETGSGKSTQVPHFLLEDLLLD 618
Query: 342 ARGAACSIICTQPRRISAMAVSERVAAERGEKLGES-----VGYKVRLEGMKGRDTRLMF 396
C+I+CTQPRRISA++++ RV E G + G GY++R+E G TRL++
Sbjct: 619 EGTRKCNIVCTQPRRISAVSLATRVCEELGCESGPGGKNSLCGYQIRMESRTGEATRLLY 678
Query: 397 CTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATL 456
CTTG+ ++HVIVDE+HER ++ DFLL++ MSAT+
Sbjct: 679 CTTGVLLRKLQEDGLLSSISHVIVDEVHERSVHSDFLLVILKEILHKRSDLHLILMSATV 738
Query: 457 NAELFSSYFGGAPMLHIPGFTYPVRAYFLENILEMTRYRL---NTYNQ-IDDYGQEKSWK 512
++E FSSYF P+L I G +YPV + +E+++E T Y L + Y Q + +E
Sbjct: 739 DSEKFSSYFAHCPILRISGRSYPVEVFHVEDVIEATGYVLEKDSEYCQKFLEEEEEIMIN 798
Query: 513 MQKQALALRKRKSSIASAVEDALEAADF-REYSVQTQQSLSCWNPDSIGFNLIEHVLCHI 571
+ + K + + ++ + + ++YS +TQQ++ NP I LI +L ++
Sbjct: 799 VTTKGGGTTKYQEYVPVQSGSGIDLSPYYQKYSSRTQQAVFYMNPYKINLELILELLAYL 858
Query: 572 VK----KERPGAVLVFMTGWDDINSLKDQLQAHPLLGDPSRVLLLACHGSMASSEQRLIF 627
+ K GAVL+F+ G I L D + R L+A H +++ +Q F
Sbjct: 859 DRSPQFKNTEGAVLIFLPGLAHIQQLYDLISTDRRFSLCDRHRLIALHSVLSTQDQAAAF 918
Query: 628 DKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXX 687
P GVRKIVLATN+AET ITI DVVFVID G+ KE Y + L +++SK
Sbjct: 919 TVPPLGVRKIVLATNIAETGITIPDVVFVIDSGRTKENRYHESSQMSSLEETFVSKASAL 978
Query: 688 XXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSR 747
V+ G C+ +Y R +++F +Y +PE+LR PL+ LCL I LGS +FLSR
Sbjct: 979 QRQGRAGRVRDGFCFRMYTRDRFESFMEYSVPEILRVPLEELCLHIMKCNLGSPEDFLSR 1038
Query: 748 ALQPPEPLSVKNAIEYLQIIGALDENE-NLTVLGRNLSMLPVEPKLGKMLILGAIFNCLD 806
AL PP+P + NA+ L+ IGA NE LT LG++L+ LPV K+GKMLI GAIF CLD
Sbjct: 1039 ALDPPQPQVIGNAMNLLRKIGACQLNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLD 1098
Query: 807 PVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAER---HQ 863
PV T+ A ++ + PF P +KD A+ AK+ A SDHL + AY GWK A + H+
Sbjct: 1099 PVATLAAVMTEKSPFTTPIGRKDEADLAKSSI-ALAVSDHLTIYNAYLGWKKARQEGGHR 1157
Query: 864 SGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTE-----NCNKWS---HDEHL 915
+ YC +NFL+ +L ++ ++++ + L++ AG T+ N S H+ L
Sbjct: 1158 AEMTYCRRNFLNRTSLLTLEDVKQELIKLVRAAGFTAPTTQHRLDGNGGTQSLSLHEIAL 1217
Query: 916 IRAVICAGLFPGLCSVV-NKEKSIALKT---MEDGQVLLYSNSVNAGVPKIPYPWLVFNE 971
++AV+ AGL+ + ++ K I K +E Q + + + WL++ E
Sbjct: 1218 LKAVLTAGLYDNVGKIMYTKSVDITEKLACLVETAQGKAQVHPSSVNRDLQVHGWLLYQE 1277
Query: 972 KIKVNSVFLRDSTGVSDSVLLLFGGNI 998
K++ V+LR++T +S +LLFGG+I
Sbjct: 1278 KVRYAKVYLRETTLISPFPILLFGGDI 1304
Score = 46 (21.3 bits), Expect = 1.4e-120, Sum P(2) = 1.4e-120
Identities = 19/71 (26%), Positives = 32/71 (45%)
Query: 220 HLKAYLSQKYINASMSSLSN--VGSTTNDEGLYE-QQEQ-LVQNSVVRERILRQRSLQMH 275
HL A LS+ AS+S G E + QQE +++ V + ++ + Q
Sbjct: 270 HLAAKLSEAKEQASISKQDKDKQGQKVAQEKIRRIQQEMAMLEEHPVFDPAIKTSNQQQK 329
Query: 276 EKQQAWQESPE 286
EK++A P+
Sbjct: 330 EKKKATPPQPQ 340
Score = 42 (19.8 bits), Expect = 3.6e-120, Sum P(2) = 3.6e-120
Identities = 16/88 (18%), Positives = 33/88 (37%)
Query: 228 KYINASMSSLSNVGSTTNDEGLYEQQEQLVQNSVVRERILRQRSLQMHEKQQAWQESPEG 287
+Y N DE ++ E+ V + Q S+ +K + Q+ +
Sbjct: 240 RYAEQQSDEEKNESVKETDEEKFDPNERYVHLAAKLSEAKEQASISKQDKDKQGQKVAQ- 298
Query: 288 QKMLEFRRSLPSYKERDALLKAI-SENQ 314
+K+ ++ + +E AI + NQ
Sbjct: 299 EKIRRIQQEMAMLEEHPVFDPAIKTSNQ 326
>UNIPROTKB|E1B9N7 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:DAAA02050346 IPI:IPI00907457 Ensembl:ENSBTAT00000013897
ArrayExpress:E1B9N7 Uniprot:E1B9N7
Length = 1367
Score = 1182 (421.1 bits), Expect = 4.1e-120, P = 4.1e-120
Identities = 279/749 (37%), Positives = 422/749 (56%)
Query: 282 QESPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEA 341
Q +P+ Q++L+ R+ LP +K R ++++ + ++VVVV+GETG GK+TQ+P ++LE
Sbjct: 554 QSTPKYQRLLKERQQLPVFKHRSSVVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLN 613
Query: 342 ARGAA-CSIICTQPRRISAMAVSERVAAERGEKLGES-----VGYKVRLEGMKGRDTRLM 395
G C+I+CTQPRRISA++++ RV E G + G GY++R+E TRL+
Sbjct: 614 EWGTTKCNIVCTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRLL 673
Query: 396 FCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSAT 455
+CTTG+ V+HVIVDE+HER + DFLLI+ MSAT
Sbjct: 674 YCTTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSAT 733
Query: 456 LNAELFSSYFGGAPMLHIPGFTYPVRAYFLENILEMTRYRL---NTYNQ-IDDYGQEKSW 511
++ E FS+YF P+L I G +YPV + LE+I+E T + L + Y Q + +E +
Sbjct: 734 VDCEKFSTYFTHCPILRISGRSYPVEVFHLEDIIEETGFVLEKDSEYCQKFLEEEEEITI 793
Query: 512 KMQKQALALRKRKSSIASAVEDALEAADF-REYSVQTQQSLSCWNPDSIGFNLIEHVLCH 570
+ +A ++K + I + + F ++YS +TQ ++ NP I +LI +L +
Sbjct: 794 NVTTKAGGIKKYQEYIPVQTGTSADLNPFYQKYSSRTQHAILYMNPHKINLDLILELLTY 853
Query: 571 IVK----KERPGAVLVFMTGWDDINSLKDQLQAHPLLGDPSRVLLLACHGSMASSEQRLI 626
+ + K GAVL+F+ G I L D L R ++A H +++ +Q
Sbjct: 854 LDRSPQFKNVEGAVLIFLPGLAHIQQLYDLLSTDRRFFS-ERYKVIALHSILSTQDQAAA 912
Query: 627 FDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXX 686
F P GVRKIVLATN+AET ITI DVVFVID G+ KE Y + L+ +++SK
Sbjct: 913 FTLPPQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASA 972
Query: 687 XXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLS 746
V+ G C+ +Y R ++ F DY +PE+LR PL+ LCL I LGS +FLS
Sbjct: 973 LQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEELCLHIMKCNLGSPEDFLS 1032
Query: 747 RALQPPEPLSVKNAIEYLQIIGALDENE-NLTVLGRNLSMLPVEPKLGKMLILGAIFNCL 805
+AL PP+ + NA+ L+ IGA + NE LT LG++L+ LPV K+GKMLI GAIF CL
Sbjct: 1033 KALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCL 1092
Query: 806 DPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSG 865
DPV T+ A ++ + PF+ P +KD A+ AK+ + D SDHL + AY GWK A R + G
Sbjct: 1093 DPVATLAAVMTEKSPFITPIGRKDEADLAKSALAMAD-SDHLTIYNAYLGWKKA-RQEGG 1150
Query: 866 YE----YCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENC---NK----WSHDE- 913
Y YC KNFL+ +L ++ ++++ + L+K AG + T N N+ S E
Sbjct: 1151 YRSEIAYCRKNFLNRTSLLTLEDVKQELIKLVKAAGFLSSTTSNSFEGNRATQTLSFQEI 1210
Query: 914 HLIRAVICAGLFPGLCSVV-NKEKSIALKT---MEDGQVLLYSNSVNAGVPKIPYPWLVF 969
L++AV+ AGL+ + ++ K I K +E Q + + Y WL++
Sbjct: 1211 ALLKAVLTAGLYDNVGKIIYTKSVDITEKLACIVETAQGKAQVHPSSVNRDLQIYGWLLY 1270
Query: 970 NEKIKVNSVFLRDSTGVSDSVLLLFGGNI 998
EKI+ V+LR++T ++ +LLFGG+I
Sbjct: 1271 QEKIRYARVYLRETTLITPFPVLLFGGDI 1299
>UNIPROTKB|E2RID8 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:54505
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437 RefSeq:XP_535238.2
Ensembl:ENSCAFT00000010821 GeneID:478060 KEGG:cfa:478060
NextBio:20853441 Uniprot:E2RID8
Length = 1367
Score = 1177 (419.4 bits), Expect = 1.4e-119, P = 1.4e-119
Identities = 274/749 (36%), Positives = 423/749 (56%)
Query: 282 QESPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEA 341
Q +P+ Q++L+ R+ LP +K R+++++ + ++VVVV+GETG GK+TQ+P ++LE
Sbjct: 554 QSTPKYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLN 613
Query: 342 ARGAA-CSIICTQPRRISAMAVSERVAAERGEKLGES-----VGYKVRLEGMKGRDTRLM 395
G + C+I+CTQPRRISA++++ RV E G + G GY++R+E TRL+
Sbjct: 614 EWGTSKCNIVCTQPRRISAVSLATRVCDELGCENGPGGRNSLCGYQIRMESRASESTRLL 673
Query: 396 FCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSAT 455
+CTTG+ V+HVIVDE+HER + DFLLI+ MSAT
Sbjct: 674 YCTTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSAT 733
Query: 456 LNAELFSSYFGGAPMLHIPGFTYPVRAYFLENILEMTRYRL---NTYNQ-IDDYGQEKSW 511
+++E FS+YF P+L I G +YPV + LE+I+E T + L + Y Q + +E +
Sbjct: 734 VDSEKFSTYFTHCPILRISGRSYPVEVFHLEDIVEETGFVLEKDSEYCQKFLEEEEEITI 793
Query: 512 KMQKQALALRKRKSSIASAVEDALEAADF-REYSVQTQQSLSCWNPDSIGFNLIEHVLCH 570
+ +A ++K + I + + F ++YS +TQ ++ NP I +LI +L +
Sbjct: 794 NVTSKAGGIKKHQEYIPVNTGSSADLNPFYQKYSNRTQHAILYMNPHKINLDLILELLIY 853
Query: 571 IVKKER----PGAVLVFMTGWDDINSLKDQLQAHPLLGDPSRVLLLACHGSMASSEQRLI 626
+ + + GAVL+F+ G I L D L R ++A H +++ +Q
Sbjct: 854 LDRSPQFRNIEGAVLIFLPGLAHIQQLYDLLSTDRRFFS-ERYKVIALHSILSTQDQAAA 912
Query: 627 FDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXX 686
F P GVRKIVLATN+AET ITI DVVFVID G+ KE Y + L+ +++SK
Sbjct: 913 FTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASA 972
Query: 687 XXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLS 746
V+ G C+ +Y R ++ F DY +PE+LR PL+ LCL I LGS +FLS
Sbjct: 973 LQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEELCLHIMKCNLGSPEDFLS 1032
Query: 747 RALQPPEPLSVKNAIEYLQIIGALDENE-NLTVLGRNLSMLPVEPKLGKMLILGAIFNCL 805
+AL PP+ + NA+ L+ IGA + NE LT LG++L+ LPV K+GKMLI GAIF CL
Sbjct: 1033 KALDPPQLQVISNAMNLLRKIGACELNEPTLTPLGQHLAALPVNVKIGKMLIFGAIFGCL 1092
Query: 806 DPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSG 865
DPV T+ A ++ + PF P +KD A+ AK+ + D SDHL + AY GWK A R + G
Sbjct: 1093 DPVATLAAVMTEKSPFTTPIGRKDEADLAKSALAMAD-SDHLTIYNAYLGWKKA-RQEGG 1150
Query: 866 YE----YCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENC---NKWSH-----DE 913
Y YC +NFL+ +L ++ ++++ + L+K AG T N N+ S +
Sbjct: 1151 YRSEIAYCRRNFLNRTSLLTLEDVKQELMKLVKAAGFSSSTTSNDWEENRASQTLPFQEI 1210
Query: 914 HLIRAVICAGLFPGLCSVV-NKEKSIALKT---MEDGQVLLYSNSVNAGVPKIPYPWLVF 969
L++AV+ AGL+ + ++ K + K +E Q + + Y WL++
Sbjct: 1211 ALLKAVLAAGLYDNVGKIIYTKSVDVTEKLACIVETAQGKAQVHPSSVNRDLQTYGWLLY 1270
Query: 970 NEKIKVNSVFLRDSTGVSDSVLLLFGGNI 998
EK++ V+LR++T ++ +LLFGG+I
Sbjct: 1271 QEKVRYTRVYLRETTLITPFPVLLFGGDI 1299
>UNIPROTKB|Q7Z478 [details] [associations]
symbol:DHX29 "ATP-dependent RNA helicase DHX29"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005739
GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AY036974 EMBL:BC056219 EMBL:AL834496
EMBL:BX648101 EMBL:BX648269 EMBL:AL079292 EMBL:AF070639
IPI:IPI00217413 RefSeq:NP_061903.2 UniGene:Hs.740463
ProteinModelPortal:Q7Z478 SMR:Q7Z478 IntAct:Q7Z478
MINT:MINT-1376685 STRING:Q7Z478 PhosphoSite:Q7Z478 DMDM:110278938
PaxDb:Q7Z478 PeptideAtlas:Q7Z478 PRIDE:Q7Z478
Ensembl:ENST00000251636 GeneID:54505 KEGG:hsa:54505 UCSC:uc003jpx.3
CTD:54505 GeneCards:GC05M054552 H-InvDB:HIX0004866 HGNC:HGNC:15815
HPA:HPA038317 HPA:HPA038318 MIM:612720 neXtProt:NX_Q7Z478
PharmGKB:PA27215 HOGENOM:HOG000247063 HOVERGEN:HBG081436
InParanoid:Q7Z478 OMA:WLLYQEK OrthoDB:EOG43FGW2 PhylomeDB:Q7Z478
ChiTaRS:DHX29 GenomeRNAi:54505 NextBio:56869 Bgee:Q7Z478
CleanEx:HS_DHX29 Genevestigator:Q7Z478 GermOnline:ENSG00000067248
Uniprot:Q7Z478
Length = 1369
Score = 1174 (418.3 bits), Expect = 2.9e-119, P = 2.9e-119
Identities = 278/752 (36%), Positives = 425/752 (56%)
Query: 282 QESPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILE----S 337
Q +P+ QK+L+ R+ LP +K RD++++ + ++VVVV+GETG GK+TQ+P ++LE +
Sbjct: 557 QSTPKYQKLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLN 616
Query: 338 ETEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGES-----VGYKVRLEGMKGRDT 392
E EA++ C+I+CTQPRRISA++++ RV E G + G GY++R+E T
Sbjct: 617 EWEASK---CNIVCTQPRRISAVSLANRVCDELGCENGPGGRNSLCGYQIRMESRACEST 673
Query: 393 RLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXM 452
RL++CTTG+ V+HVIVDE+HER + DFLLI+ M
Sbjct: 674 RLLYCTTGVLLRKLQEDGLLSNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILM 733
Query: 453 SATLNAELFSSYFGGAPMLHIPGFTYPVRAYFLENILEMTRYRL---NTYNQ-IDDYGQE 508
SAT+++E FS+YF P+L I G +YPV + LE+I+E T + L + Y Q + +E
Sbjct: 734 SATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDIIEETGFVLEKDSEYCQKFLEEEEE 793
Query: 509 KSWKMQKQALALRKRKSSIASAVEDALEAADF-REYSVQTQQSLSCWNPDSIGFNLIEHV 567
+ + +A ++K + I + F ++YS +TQ ++ NP I +LI +
Sbjct: 794 VTINVTSKAGGIKKYQEYIPVQTGAHADLNPFYQKYSSRTQHAILYMNPHKINLDLILEL 853
Query: 568 LCHIVKKER----PGAVLVFMTGWDDINSLKDQLQAHPLLGDPSRVLLLACHGSMASSEQ 623
L ++ K + GAVL+F+ G I L D L R ++A H +++ +Q
Sbjct: 854 LAYLDKSPQFRNIEGAVLIFLPGLAHIQQLYDLLSNDRRFYS-ERYKVIALHSILSTQDQ 912
Query: 624 RLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISK 683
F P GVRKIVLATN+AET ITI DVVFVID G+ KE Y + L+ +++SK
Sbjct: 913 AAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSK 972
Query: 684 XXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISE 743
V+ G C+ +Y R ++ F DY +PE+LR PL+ LCL I LGS +
Sbjct: 973 ASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEELCLHIMKCNLGSPED 1032
Query: 744 FLSRALQPPEPLSVKNAIEYLQIIGALDENE-NLTVLGRNLSMLPVEPKLGKMLILGAIF 802
FLS+AL PP+ + NA+ L+ IGA + NE LT LG++L+ LPV K+GKMLI GAIF
Sbjct: 1033 FLSKALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIF 1092
Query: 803 NCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERH 862
CLDPV T+ A ++ + PF P +KD A+ AK+ + D SDHL + AY GWK A R
Sbjct: 1093 GCLDPVATLAAVMTEKSPFTTPIGRKDEADLAKSALAMAD-SDHLTIYNAYLGWKKA-RQ 1150
Query: 863 QSGYE----YCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENC---NKWSH---- 911
+ GY YC +NFL+ +L ++ ++++ + L+K AG T N+ S
Sbjct: 1151 EGGYRSEITYCRRNFLNRTSLLTLEDVKQELIKLVKAAGFSSSTTSTSWEGNRASQTLSF 1210
Query: 912 -DEHLIRAVICAGLFPGLCSVV-NKEKSIALKT---MEDGQVLLYSNSVNAGVPKIPYPW 966
+ L++AV+ AGL+ + ++ K + K +E Q + + + W
Sbjct: 1211 QEIALLKAVLVAGLYDNVGKIIYTKSVDVTEKLACIVETAQGKAQVHPSSVNRDLQTHGW 1270
Query: 967 LVFNEKIKVNSVFLRDSTGVSDSVLLLFGGNI 998
L++ EKI+ V+LR++T ++ +LLFGG+I
Sbjct: 1271 LLYQEKIRYARVYLRETTLITPFPVLLFGGDI 1302
>FB|FBgn0002774 [details] [associations]
symbol:mle "maleless" species:7227 "Drosophila melanogaster"
[GO:0005700 "polytene chromosome" evidence=IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;TAS] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0000785 "chromatin"
evidence=IDA] [GO:0007549 "dosage compensation"
evidence=NAS;IMP;TAS] [GO:0009047 "dosage compensation by
hyperactivation of X chromosome" evidence=NAS] [GO:0045433 "male
courtship behavior, veined wing generated song production"
evidence=IGI] [GO:0016456 "X chromosome located dosage compensation
complex, transcription activating" evidence=NAS;TAS] [GO:0005694
"chromosome" evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS]
[GO:0003725 "double-stranded RNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0016457 "dosage
compensation complex assembly involved in dosage compensation by
hyperactivation of X chromosome" evidence=TAS] [GO:0003724 "RNA
helicase activity" evidence=NAS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0048675 "axon extension" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0000805 "X chromosome" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0005665 "DNA-directed RNA polymerase II, core
complex" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001159 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137
PROSITE:PS51194 SMART:SM00358 SMART:SM00490 SMART:SM00847
InterPro:IPR014720 EMBL:AE013599 GO:GO:0005524 GO:GO:0008340
Gene3D:3.30.160.20 GO:GO:0045944 GO:GO:0000785 GO:GO:0003682
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0045433 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0048675 GO:GO:0003724
GeneTree:ENSGT00550000074257 KO:K13184 OMA:DDWIRLQ GO:GO:0016456
EMBL:M74121 EMBL:BT003785 EMBL:BT010267 PIR:B40025
RefSeq:NP_476641.1 RefSeq:NP_724440.1 UniGene:Dm.2901
ProteinModelPortal:P24785 SMR:P24785 IntAct:P24785 MINT:MINT-768581
STRING:P24785 PaxDb:P24785 PRIDE:P24785 EnsemblMetazoa:FBtr0086031
GeneID:35523 KEGG:dme:Dmel_CG11680 CTD:35523 FlyBase:FBgn0002774
InParanoid:P24785 OrthoDB:EOG47H44V PhylomeDB:P24785
GenomeRNAi:35523 NextBio:793836 Bgee:P24785 GermOnline:CG11680
GO:GO:0016457 Uniprot:P24785
Length = 1293
Score = 1170 (416.9 bits), Expect = 7.7e-119, P = 7.7e-119
Identities = 279/730 (38%), Positives = 409/730 (56%)
Query: 282 QESPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEA 341
Q E ++ LEFR LP R +L AI++N VV++ G TGCGKTTQ+ QYIL+ +
Sbjct: 369 QNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCGKTTQIAQYILDDYICS 428
Query: 342 ARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDT-RLMFCTTG 400
+G +I TQPRRISA++V+ERVA ER E+LG++VGY VR E + R ++FCT G
Sbjct: 429 GQGGYANIYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESVFPRPYGAILFCTVG 488
Query: 401 IXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAEL 460
+ GV+H+IVDEIHER +N DFLL++ MSAT++
Sbjct: 489 VLLRKLEAGLR--GVSHIIVDEIHERDVNSDFLLVILRDMVDTYPDLHVILMSATIDTTK 546
Query: 461 FSSYFGGAPMLHIPGFTYPVRAYFLENILEMTRYRLNTYNQIDDYGQEKSWKMQKQALAL 520
FS YFG P+L +PG +PV+ +FLE+I++MT + + + K + ++Q L+
Sbjct: 547 FSKYFGICPVLEVPGRAFPVQQFFLEDIIQMTDF----VPSAESRRKRKEVEDEEQLLSE 602
Query: 521 RKRKSSIA--SAVEDALEAADFREYSVQTQQSLSCWNPDSIGFNLIEHVLCHIVKKERPG 578
K ++ I ED +YS +T+ +++ + + F L+E +L HI K PG
Sbjct: 603 DKDEAEINYNKVCED--------KYSQKTRNAMAMLSESDVSFELLEALLMHIKSKNIPG 654
Query: 579 AVLVFMTGWDDINSLKDQLQAHPLLGDPSRVLLLACHGSMASSEQRLIFDKPEDGVRKIV 638
A+LVF+ GW+ I +L LQ + GD S+ +L CH + EQR +F+ +GV KI+
Sbjct: 655 AILVFLPGWNLIFALMKFLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKII 714
Query: 639 LATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXXXVQP 698
L+TN+AETSITI+D+VFVID KA+ + + NN W SK V+P
Sbjct: 715 LSTNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRP 774
Query: 699 GECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPEPLSVK 758
G C+ L R + A D PE+ RTPL + L IK L+LGSI FLS+AL+PP +V
Sbjct: 775 GFCFTLCSRARFQALEDNLTPEMFRTPLHEMALTIKLLRLGSIHHFLSKALEPPPVDAVI 834
Query: 759 NAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLS-- 816
A L+ + LD N+ LT LGR L+ LP+EP+LGKM++LGA+F C D +M ++A S
Sbjct: 835 EAEVLLREMRCLDANDELTPLGRLLARLPIEPRLGKMMVLGAVFGCAD-LMAIMASYSST 893
Query: 817 VRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYE--YC-WKNF 873
+ F + ++ LA KA S SDH+A++ A W+ ++ E +C WK
Sbjct: 894 FSEVFSLDIGQRRLANHQKA-LSGTKCSDHVAMIVASQMWRREKQRGEHMEARFCDWKG- 951
Query: 874 LSAQTLKAIDSLRKQFLFLLKDAGLVDR---NTENCNKWSHDEHLIR---AVICAGLFPG 927
L T+ I ++Q L LL+ AG + + E + D+ ++ A++C GL+P
Sbjct: 952 LQMSTMNVIWDAKQQLLDLLQQAGFPEECMISHEVDERIDGDDPVLDVSLALLCLGLYPN 1011
Query: 928 LCSVVNKEKSIALKTMEDGQVLLYSNSVNAG--VPKIPYPWLVFNEKIKVNSVFLRDSTG 985
+C V+KEK L T E LL+ SVN PYP+ VF EKI+ +V + +
Sbjct: 1012 IC--VHKEKRKVLTT-ESKAALLHKTSVNCSNLAVTFPYPFFVFGEKIRTRAVSCKQLSM 1068
Query: 986 VSDSVLLLFG 995
VS ++LFG
Sbjct: 1069 VSPLQVILFG 1078
>TAIR|locus:2196255 [details] [associations]
symbol:AT1G58050 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC079604
IPI:IPI00531251 PIR:F96613 RefSeq:NP_176102.1 UniGene:At.52250
ProteinModelPortal:Q9C6G0 SMR:Q9C6G0 PaxDb:Q9C6G0 PRIDE:Q9C6G0
EnsemblPlants:AT1G58050.1 GeneID:842172 KEGG:ath:AT1G58050
TAIR:At1g58050 HOGENOM:HOG000240812 InParanoid:Q9C6G0 OMA:ISPENED
PhylomeDB:Q9C6G0 ProtClustDB:CLSN2679369 Genevestigator:Q9C6G0
Uniprot:Q9C6G0
Length = 1417
Score = 1007 (359.5 bits), Expect = 5.4e-118, Sum P(3) = 5.4e-118
Identities = 242/655 (36%), Positives = 363/655 (55%)
Query: 274 MHEKQQAWQESPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQY 333
+ +KQ+ ++ + + ML+ R +LP + + +L+ + E V+VV GETG GKTTQ+PQ+
Sbjct: 574 LKQKQENKKKMQKYKDMLKTRAALPISEVKKDILQKLKEKDVLVVCGETGSGKTTQVPQF 633
Query: 334 ILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEK---LGESV-GYKVRLEGMKG 389
IL+ ++ G C+IICTQPR A+ V++RVA ER E SV Y+VR + +
Sbjct: 634 ILDDMIDSGHGGYCNIICTQPR---AITVAQRVADERCEPPPGFDNSVVAYQVRHQNARS 690
Query: 390 RDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXX 449
TRL+FCTTGI VTH+IVDE+HER + DFLLI+
Sbjct: 691 DKTRLLFCTTGILLRKLVGDTTLKDVTHIIVDEVHERSLMGDFLLIILKSLIEKQSWDNA 750
Query: 450 X------XMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYFLENILEMTRYRLNTYNQID 503
MSAT++A FS YFG P++ G T+PV YFLE+I E T+Y L + +
Sbjct: 751 LPKLKVILMSATVDAHQFSRYFGQCPIITAQGRTHPVTTYFLEDIYERTKYLLASDSPAA 810
Query: 504 DYGQEKSWKMQKQALALRKRKSSIASAVEDALEAADFREYSVQTQ-QSLSCWNPDSIGFN 562
R +K+ + + D+ + E S+ T S+ + ++
Sbjct: 811 LSSDTSITDKLGSVNVPRGKKNLMLAGWGDSYLVS---EDSLNTSYDSIKYIASAVVDYD 867
Query: 563 LIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQLQAHPLLGDPSRVLLLACHGSMASSE 622
L+E ++CHI GA+LVF+ G +IN L ++L A S LL H S+AS+E
Sbjct: 868 LLEELICHIDDTCEEGAILVFLPGMSEINMLLNRLAASYRFRGASGDWLLPLHSSIASTE 927
Query: 623 QRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWIS 682
Q+ +F +P G+RK+++ATN+AETSITI DVV+VID GK KE Y+ ++ W+S
Sbjct: 928 QKKVFLRPPKGIRKVIIATNIAETSITIEDVVYVIDSGKHKENRYNPHKKLSSMVEDWVS 987
Query: 683 KXXXXXXXXXXXXVQPGECYHLYPRYVYDAFA-DYQLPELLRTPLQSLCLQIKSLQLGSI 741
K V+PG C+ LY R+ ++ YQ+PE+LR PL LCL IK L LG I
Sbjct: 988 KANARQRMGRAGRVKPGHCFSLYTRHRFEKLMRPYQVPEMLRVPLVELCLHIKLLGLGQI 1047
Query: 742 SEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAI 801
FLS+AL+PP ++ +AI L +GAL+ +E LT LG +L+ LPV+ +GKML+ G I
Sbjct: 1048 KPFLSKALEPPSESAINSAILLLHKVGALEGDEELTPLGHHLAKLPVDLLIGKMLLYGGI 1107
Query: 802 FNCLDPVMTVVAGLSV-RDPFLMPFDKKDLAE------SAKAQFSAR----D-YSDHLAL 849
F CL P++++ A LS + PF+ D++++ S K + S+ D SDHL +
Sbjct: 1108 FGCLSPILSIAAFLSCCKSPFVYAKDEQNVDRVKLALLSDKLESSSNLNNNDRQSDHLLM 1167
Query: 850 VRAYDGWKDAERHQSGYE----YCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVD 900
V AY+ W H+ G++ +C FL++ ++ + R +F LL D GL++
Sbjct: 1168 VVAYEKWVRI-LHEQGFKAAESFCESKFLNSSVMRMMRERRVEFGMLLADIGLIN 1221
Score = 155 (59.6 bits), Expect = 5.4e-118, Sum P(3) = 5.4e-118
Identities = 39/114 (34%), Positives = 66/114 (57%)
Query: 895 DAGLVDRNTENCNKWSHDEHLIRAVICAGLFPGLCS-VVNKEKSIALKTME-----DG-- 946
D D+ T+ N +S + +++A++CAGL P + +VN+ A +T DG
Sbjct: 1234 DVWFSDK-TQPFNMYSQEPEVVKAILCAGLCPNIAEGLVNRLTKPAEETQRYAVWHDGKR 1292
Query: 947 QVLLYSNSVNAGVPKIPYPWLVFNEKIKVNSV-FLRDSTGVSDSVLLLFGGNIS 999
+V ++ NS+N YP++VF EK++ V +L+D+T VS +LLFGG+I+
Sbjct: 1293 EVHIHRNSINKNCKAFQYPFIVFLEKLETKKVVYLQDTTVVSPFSILLFGGSIN 1346
Score = 40 (19.1 bits), Expect = 5.4e-118, Sum P(3) = 5.4e-118
Identities = 22/75 (29%), Positives = 36/75 (48%)
Query: 187 SKAPLPNYRSDLDEKRPQREVILPFGLLREVDAHLKAYLSQKYINASMSSLSNVGSTTND 246
SKAP S +E R +R ++L F R + + A LS + L+N+ +
Sbjct: 31 SKAP-KLLISPENEDRLRR-LLLNF---RRTPSPVTATLS---VTQKRKKLNNLYENLSC 82
Query: 247 EGLYEQQEQLVQNSV 261
EG + Q +LV +S+
Sbjct: 83 EGFLDNQIELVLSSL 97
Score = 38 (18.4 bits), Expect = 8.7e-118, Sum P(3) = 8.7e-118
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 109 ESSDDSDREF--GSTQQQMCGSTLDNIDE 135
ES DR+ G+ ++++ S LD++ E
Sbjct: 272 ESEFQRDRQDCEGAREKEVASSVLDDVHE 300
Score = 38 (18.4 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 226 SQKYINASMSSLSNVGSTTNDEGL 249
S+ IN+++ L VG+ DE L
Sbjct: 1059 SESAINSAILLLHKVGALEGDEEL 1082
>UNIPROTKB|J9PAM3 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
EMBL:AAEX03007702 Ensembl:ENSCAFT00000046695 Uniprot:J9PAM3
Length = 1000
Score = 698 (250.8 bits), Expect = 2.5e-113, Sum P(2) = 2.5e-113
Identities = 152/390 (38%), Positives = 232/390 (59%)
Query: 554 WNPDSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQL--QAHPLLGDPSRVLL 611
++ + + +LI H+L +I GA+L+F+ G+D+I L+D++ + R +
Sbjct: 598 FDDEKVDLDLIMHLLYNICHGCDAGAILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQV 657
Query: 612 LACHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALN 671
H +M +S+Q+ + P GVRKI+L+TN+AETSIT+NDVVFVID GK KE S+DALN
Sbjct: 658 FMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALN 717
Query: 672 NTPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCL 731
L WISK +PG C+ L+ R + ++Q PELLR PLQ LCL
Sbjct: 718 FVTMLKMVWISKASAVQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCL 777
Query: 732 QIKSLQLGS--ISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVE 789
K L + I++FL +A +PP L V+NA++ L+ I A+D E+LT LG +L+ LPVE
Sbjct: 778 HTKLLAPVNCPIADFLMKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVE 837
Query: 790 PKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFD--KKDLAESAKAQFSARDYSDHL 847
P LGKM++ + CLDP++T+ L+ RDPF++P +K A + +F+A +SDH+
Sbjct: 838 PHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHM 897
Query: 848 ALVRAYDGWKDAERHQSGYE--YCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDR---- 901
AL+RA+ W+ A G+E +C KNFLS T++ I +R Q L L+ +G V
Sbjct: 898 ALLRAFQAWQKAR--SDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGG 955
Query: 902 NTENCNKWSHDEHLIRAVICAGLFPGLCSV 931
+ + N S + +++A + AG++P L V
Sbjct: 956 DIRDVNTNSENWAVVKAALVAGMYPNLVHV 985
Score = 444 (161.4 bits), Expect = 2.5e-113, Sum P(2) = 2.5e-113
Identities = 94/226 (41%), Positives = 137/226 (60%)
Query: 293 FRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICT 352
FR+SLP +++++ ++K I EN+VV++ GETG GKTTQ+PQ++L+ + G C I CT
Sbjct: 188 FRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFK--NGIPCRIFCT 245
Query: 353 QPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXX 412
QPRR++A+AV+ERVAAER E++G+++GY++RLE T L FCT G+
Sbjct: 246 QPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDST 305
Query: 413 XG-VTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPML 471
VTHVIVDE+HER DFLL SA L+ LF YFG P++
Sbjct: 306 LSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVI 365
Query: 472 HIPGFTYPVRAYFLENILEMTRYRLNTYNQIDDYGQEKSWKMQKQA 517
+I G + V+ FLE+IL T Y T ++ Y +EK + ++Q+
Sbjct: 366 YIQGRPFEVKEMFLEDILRTTGY---TNKEMLKYKKEKQREEKQQS 408
>MGI|MGI:2448561 [details] [associations]
symbol:Ythdc2 "YTH domain containing 2" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
MGI:MGI:2448561 GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882
CTD:64848 HOGENOM:HOG000155703 OMA:RAFWESS OrthoDB:EOG4JWVCN
EMBL:BC138263 EMBL:BC171951 IPI:IPI00343249 RefSeq:NP_001156485.1
UniGene:Mm.244482 ProteinModelPortal:B2RR83 SMR:B2RR83
PhosphoSite:B2RR83 PaxDb:B2RR83 PRIDE:B2RR83
Ensembl:ENSMUST00000037763 GeneID:240255 KEGG:mmu:240255
UCSC:uc008evb.2 InParanoid:B2RR83 ChiTaRS:YTHDC2 NextBio:384522
Bgee:B2RR83 Genevestigator:B2RR83 Uniprot:B2RR83
Length = 1445
Score = 707 (253.9 bits), Expect = 8.8e-113, Sum P(2) = 8.8e-113
Identities = 161/440 (36%), Positives = 255/440 (57%)
Query: 532 EDALEAADFREYSVQTQQSLSCWN----PDSIGFNLIEHVLCHIVKKERPGAVLVFMTGW 587
E +L + + S + ++ L ++ + + +LI H+L +I GA+L+F+ G+
Sbjct: 588 ESSLVQTNGNDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLYNICHSCDAGAILIFLPGY 647
Query: 588 DDINSLKDQL--QAHPLLGDPSRVLLLACHGSMASSEQRLIFDKPEDGVRKIVLATNMAE 645
D+I L+D++ + R + H +M +S+Q+ + P GVRKI+L+TN+AE
Sbjct: 648 DEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAE 707
Query: 646 TSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXXXVQPGECYHLY 705
TSIT+NDVVFVID GK KE S+DALN L WISK +PG C+ L+
Sbjct: 708 TSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLF 767
Query: 706 PRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGS--ISEFLSRALQPPEPLSVKNAIEY 763
R + ++Q PELLR PLQ LCL K L + I++FL +A +PP L V+NA++
Sbjct: 768 SRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCTIADFLMKAPEPPPALIVRNAVQM 827
Query: 764 LQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLM 823
L+ I A+D E+LT LG +L+ LPVEP LGKM++ + CLDP++T+ L+ RDPF++
Sbjct: 828 LKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVL 887
Query: 824 PFD--KKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYE--YCWKNFLSAQTL 879
P +K A + +F+A +SDH+AL+RA+ W+ A G+E +C KNFLS T+
Sbjct: 888 PTQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQKAR--SDGWERAFCEKNFLSQATM 945
Query: 880 KAIDSLRKQFLFLLKDAGLVDR----NTENCNKWSHDEHLIRAVICAGLFPGLCSVVNKE 935
+ I +R Q L L+ +G V + + N S + +++A + AG++P L V ++E
Sbjct: 946 EIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVKAALVAGMYPNLVHV-DRE 1004
Query: 936 KSIALKTMEDGQVLLYSNSV 955
++ L ++ +V + SV
Sbjct: 1005 -NVILTGPKEKKVRFHPTSV 1023
Score = 448 (162.8 bits), Expect = 8.8e-113, Sum P(2) = 8.8e-113
Identities = 106/281 (37%), Positives = 157/281 (55%)
Query: 293 FRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICT 352
FR+SLP +++++ ++K I EN+VV++ GETG GKTTQ+PQ++L+ + G C I CT
Sbjct: 204 FRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFK--NGIPCRIFCT 261
Query: 353 QPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXX 412
QPRR++A+AV+ERVAAER E++G+++GY++RLE T L FCT G+
Sbjct: 262 QPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDST 321
Query: 413 XG-VTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPML 471
VTHVIVDE+HER DFLL SA L+ LF YFG P++
Sbjct: 322 LSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVI 381
Query: 472 HIPGFTYPVRAYFLENILEMTRYRLNTYNQIDDYGQEKSWKMQKQALALRK--------- 522
+I G + V+ FLE+IL T Y T ++ Y +EK + +KQ L +
Sbjct: 382 YIQGRPFEVKEMFLEDILRTTGY---TNKEMLKYKKEKQ-REEKQQTTLTEWYSAQENTF 437
Query: 523 -----RKSSIASAVE--DALEAADFREYSVQTQQSLSCWNP 556
R+ ++AS E D L+ +S T++ ++C P
Sbjct: 438 KPESQRQRAVASVSEEYDLLDDGGDAVFSQLTEKDVNCLEP 478
Score = 78 (32.5 bits), Expect = 5.2e-41, Sum P(2) = 5.2e-41
Identities = 33/158 (20%), Positives = 65/158 (41%)
Query: 854 DGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLV-DRNTENCNKWSHD 912
DGW+ A ++ + + + LR + G + D NT N W+
Sbjct: 928 DGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNT-NSENWA-- 984
Query: 913 EHLIRAVICAGLFPGLCSVVN--------KEKSIAL---KTMEDGQV--LLYSNSVNAGV 959
+++A + AG++P L V KEK + + Q + +N A +
Sbjct: 985 --VVKAALVAGMYPNLVHVDRENVILTGPKEKKVRFHPTSVLSQPQYKKIPPANGQAAAI 1042
Query: 960 PKIPYPWLVFNEKIKVNSVF-LRDSTGVSDSVLLLFGG 996
+P WL+++E + + + +R + V+ +L+F G
Sbjct: 1043 QALPTDWLIYDEMTRAHRIANIRCCSAVTPVTVLVFCG 1080
>UNIPROTKB|F1MNU7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 CTD:64848 OMA:RAFWESS EMBL:DAAA02027655
IPI:IPI00689346 RefSeq:NP_001179740.1 UniGene:Bt.24975
ProteinModelPortal:F1MNU7 Ensembl:ENSBTAT00000018745 GeneID:541024
KEGG:bta:541024 NextBio:20878969 Uniprot:F1MNU7
Length = 1429
Score = 707 (253.9 bits), Expect = 1.7e-112, Sum P(2) = 1.7e-112
Identities = 165/444 (37%), Positives = 255/444 (57%)
Query: 524 KSSIASAVEDALEAADFREYSVQTQQSLSCWNPDSIGFNLIEHVLCHIVKKERPGAVLVF 583
+SS+ L A D RE S ++ + + +LI H+L +I GA+L+F
Sbjct: 572 ESSLVQTSGSDLSAED-RELLKAYHHS---FDDEKVDLDLIMHLLYNICHSCEAGAILIF 627
Query: 584 MTGWDDINSLKDQL--QAHPLLGDPSRVLLLACHGSMASSEQRLIFDKPEDGVRKIVLAT 641
+ G+D+I L+D++ + R + H +M +S+Q+ + P GVRKI+L+T
Sbjct: 628 LPGYDEIVGLRDRILFDDKRFAENAHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILST 687
Query: 642 NMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXXXVQPGEC 701
N+AETSIT+NDVVFVID GK KE S+DALN L WISK +PG C
Sbjct: 688 NIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGIC 747
Query: 702 YHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGS--ISEFLSRALQPPEPLSVKN 759
+ L+ R + ++Q PELLR PLQ LCL K L + I++FL +A +PP L V+N
Sbjct: 748 FRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCAIADFLMKAPEPPPALIVRN 807
Query: 760 AIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRD 819
A++ L+ I A+D E+LT LG +L+ LPVEP LGKM++ + CLDP++T+ L+ RD
Sbjct: 808 AVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRD 867
Query: 820 PFLMPFD--KKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYE--YCWKNFLS 875
PF++P +K A + +F+A +SDH+AL+RA+ W+ A G+E +C KNFLS
Sbjct: 868 PFVLPTQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQKAR--SDGWERAFCEKNFLS 925
Query: 876 AQTLKAIDSLRKQFLFLLKDAGLVDR----NTENCNKWSHDEHLIRAVICAGLFPGLCSV 931
T++ I +R Q L L+ +G V + + N S + +++A + AG++P L V
Sbjct: 926 QATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVKAALVAGMYPHLVHV 985
Query: 932 VNKEKSIALKTMEDGQVLLYSNSV 955
++E ++ L ++ +V + SV
Sbjct: 986 -DRE-NVVLAGPKEKKVRFHPTSV 1007
Score = 445 (161.7 bits), Expect = 1.7e-112, Sum P(2) = 1.7e-112
Identities = 96/229 (41%), Positives = 137/229 (59%)
Query: 293 FRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICT 352
FR+SLP +++++ ++K I EN+VV++ GETG GKTTQ+PQ++L+ + G C I CT
Sbjct: 188 FRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFK--NGIPCRIFCT 245
Query: 353 QPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXX 412
QPRR++A+AV+ERVAAER E++G+++GY++RLE T L FCT G+
Sbjct: 246 QPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDST 305
Query: 413 XG-VTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPML 471
VTHVIVDE+HER DFLL SA L+ LF YFG P++
Sbjct: 306 LSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVI 365
Query: 472 HIPGFTYPVRAYFLENILEMTRYRLNTYNQIDDYGQEKSWKMQKQALAL 520
+I G + V+ FLE+IL T Y T ++ Y +EK + +KQ L
Sbjct: 366 YIQGRPFEVKEMFLEDILRTTGY---TNKEMLKYKKEKQ-REEKQQTTL 410
Score = 78 (32.5 bits), Expect = 1.1e-40, Sum P(2) = 1.1e-40
Identities = 33/158 (20%), Positives = 65/158 (41%)
Query: 854 DGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLV-DRNTENCNKWSHD 912
DGW+ A ++ + + + LR + G + D NT N W+
Sbjct: 912 DGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNT-NSENWA-- 968
Query: 913 EHLIRAVICAGLFPGLCSVVN--------KEKSIAL---KTMEDGQV--LLYSNSVNAGV 959
+++A + AG++P L V KEK + + Q + +N A +
Sbjct: 969 --VVKAALVAGMYPHLVHVDRENVVLAGPKEKKVRFHPTSVLSQPQYKKIPPANGQTAAI 1026
Query: 960 PKIPYPWLVFNEKIKVNSVF-LRDSTGVSDSVLLLFGG 996
+P WL+++E + + + +R + V+ +L+F G
Sbjct: 1027 QALPTDWLIYDEMTRAHRIANIRCCSAVTPVTVLVFCG 1064
>UNIPROTKB|Q9H6S0 [details] [associations]
symbol:YTHDC2 "Probable ATP-dependent RNA helicase YTHDC2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 EMBL:AC093208 EMBL:AC010389 EMBL:BC137285
EMBL:AK025593 IPI:IPI00010200 RefSeq:NP_073739.3 UniGene:Hs.231942
PDB:2YU6 PDBsum:2YU6 ProteinModelPortal:Q9H6S0 SMR:Q9H6S0
IntAct:Q9H6S0 PhosphoSite:Q9H6S0 DMDM:239938805 PaxDb:Q9H6S0
PeptideAtlas:Q9H6S0 PRIDE:Q9H6S0 Ensembl:ENST00000161863
GeneID:64848 KEGG:hsa:64848 UCSC:uc003kqn.3 CTD:64848
GeneCards:GC05P112877 HGNC:HGNC:24721 HPA:HPA037364
neXtProt:NX_Q9H6S0 PharmGKB:PA134912676 HOGENOM:HOG000155703
HOVERGEN:HBG063891 InParanoid:Q9H6S0 OMA:RAFWESS OrthoDB:EOG4JWVCN
PhylomeDB:Q9H6S0 EvolutionaryTrace:Q9H6S0 GenomeRNAi:64848
NextBio:66962 ArrayExpress:Q9H6S0 Bgee:Q9H6S0 CleanEx:HS_YTHDC2
Genevestigator:Q9H6S0 GermOnline:ENSG00000047188 Uniprot:Q9H6S0
Length = 1430
Score = 704 (252.9 bits), Expect = 4.6e-112, Sum P(2) = 4.6e-112
Identities = 164/440 (37%), Positives = 256/440 (58%)
Query: 532 EDALEAADFREYSVQTQQSLSCWN----PDSIGFNLIEHVLCHIVKKERPGAVLVFMTGW 587
E +L + + S + ++ L ++ + + +LI H+L +I GAVL+F+ G+
Sbjct: 573 ESSLVQTNGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLYNICHSCDAGAVLIFLPGY 632
Query: 588 DDINSLKDQ-LQAHPLLGDPS-RVLLLACHGSMASSEQRLIFDKPEDGVRKIVLATNMAE 645
D+I L+D+ L D + R + H +M +S+Q+ + P GVRKI+L+TN+AE
Sbjct: 633 DEIVGLRDRILFDDKRFADSTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAE 692
Query: 646 TSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXXXVQPGECYHLY 705
TSIT+NDVVFVID GK KE S+DALN L WISK +PG C+ L+
Sbjct: 693 TSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLF 752
Query: 706 PRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGS--ISEFLSRALQPPEPLSVKNAIEY 763
R + ++Q PELLR PLQ LCL K L + I++FL +A +PP L V+NA++
Sbjct: 753 SRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCPIADFLMKAPEPPPALIVRNAVQM 812
Query: 764 LQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLM 823
L+ I A+D E+LT LG +L+ LPVEP LGKM++ + CLDP++T+ L+ RDPF++
Sbjct: 813 LKTIDAMDTWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVL 872
Query: 824 PFD--KKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYE--YCWKNFLSAQTL 879
P +K A + +F+A +SDH+AL+RA+ W+ A G+E +C KNFLS T+
Sbjct: 873 PTQASQKRAAMLCRKRFTAGAFSDHMALLRAFQAWQKAR--SDGWERAFCEKNFLSQATM 930
Query: 880 KAIDSLRKQFLFLLKDAGLVDR----NTENCNKWSHDEHLIRAVICAGLFPGLCSVVNKE 935
+ I +R Q L L+ +G V + + N S + +++A + AG++P L V ++E
Sbjct: 931 EIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVKAALVAGMYPNLVHV-DRE 989
Query: 936 KSIALKTMEDGQVLLYSNSV 955
++ L ++ +V + SV
Sbjct: 990 -NLVLTGPKEKKVRFHPASV 1008
Score = 444 (161.4 bits), Expect = 4.6e-112, Sum P(2) = 4.6e-112
Identities = 94/225 (41%), Positives = 136/225 (60%)
Query: 293 FRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICT 352
FR+SLP +++++ ++K I EN+VV++ GETG GKTTQ+PQ++L+ + G C I CT
Sbjct: 189 FRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFK--NGIPCRIFCT 246
Query: 353 QPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXX 412
QPRR++A+AV+ERVAAER E++G+++GY++RLE T L FCT G+
Sbjct: 247 QPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDST 306
Query: 413 XG-VTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPML 471
VTHVIVDE+HER DFLL SA L+ LF YFG P++
Sbjct: 307 LSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVI 366
Query: 472 HIPGFTYPVRAYFLENILEMTRYRLNTYNQIDDYGQEKSWKMQKQ 516
+I G + V+ FLE+IL T Y T ++ Y +EK + ++Q
Sbjct: 367 YIQGRPFEVKEMFLEDILRTTGY---TNKEMLKYKKEKQQEEKQQ 408
Score = 79 (32.9 bits), Expect = 1.1e-40, Sum P(2) = 1.1e-40
Identities = 33/158 (20%), Positives = 65/158 (41%)
Query: 854 DGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLV-DRNTENCNKWSHD 912
DGW+ A ++ + + + LR + G + D NT N W+
Sbjct: 913 DGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNT-NSENWA-- 969
Query: 913 EHLIRAVICAGLFPGLCSVVN--------KEKSIAL---KTMEDGQV--LLYSNSVNAGV 959
+++A + AG++P L V KEK + + Q + +N A +
Sbjct: 970 --VVKAALVAGMYPNLVHVDRENLVLTGPKEKKVRFHPASVLSQPQYKKIPPANGQAAAI 1027
Query: 960 PKIPYPWLVFNEKIKVNSVF-LRDSTGVSDSVLLLFGG 996
+P WL+++E + + + +R + V+ +L+F G
Sbjct: 1028 KALPTDWLIYDEMTRAHRIANIRCCSAVTPVTILVFCG 1065
>UNIPROTKB|F1NS70 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 OMA:RAFWESS EMBL:AADN02056192 EMBL:AADN02056193
IPI:IPI00591470 Ensembl:ENSGALT00000000247 Uniprot:F1NS70
Length = 1339
Score = 690 (248.0 bits), Expect = 5.9e-112, Sum P(2) = 5.9e-112
Identities = 166/455 (36%), Positives = 258/455 (56%)
Query: 524 KSSIASAVEDALEAADFREYSVQTQQSLSCWNPDSIGFNLIEHVLCHIVKKERPGAVLVF 583
+SS+ A + L A D RE S ++ + + +LI H+L +I GA+L+F
Sbjct: 483 ESSLVQASGNDLGAED-RELLKAYHHS---FDDEKVDLDLIMHLLYNICNSSDGGAILIF 538
Query: 584 MTGWDDINSLKDQL--QAHPLLGDP-SRVLLLACHGSMASSEQRLIFDKPEDGVRKIVLA 640
+ G+D+I SL+D++ + + S+ + H +M + +Q+ + P G+RKI+L+
Sbjct: 539 LPGYDEIISLRDRIIFDDKRFVDNAHSKYQVFMLHSNMQTLDQKNVLKTPPSGIRKIILS 598
Query: 641 TNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXXXVQPGE 700
TN+AETSIT+NDVVFVID GK KE S+DAL+ L WISK +PG
Sbjct: 599 TNIAETSITVNDVVFVIDSGKMKEKSFDALSCVTMLKTVWISKASAIQRRGRAGRCRPGV 658
Query: 701 CYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGS--ISEFLSRALQPPEPLSVK 758
C+HL+ R + ++Q PEL R PLQ LCL K L + + +FL +A PP L V+
Sbjct: 659 CFHLFSRLRFQNMLEFQTPELRRMPLQELCLHTKLLAPVNCPVVDFLMKAPDPPPALIVR 718
Query: 759 NAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVR 818
NAI+ L+ I A+D E+LT LG +L+ LPVEP LGKM++ + CLDP++T+ L+ R
Sbjct: 719 NAIQMLKKIDAMDVWEDLTELGYHLAELPVEPHLGKMVLCAVVLKCLDPILTIACTLAYR 778
Query: 819 DPFLMPF--DKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYE--YCWKNFL 874
DPF++P +K A + + +A +SDH+ L+RA+ W+ A G+E +C KNFL
Sbjct: 779 DPFVLPTVASQKRAAMLCRKRLAAGTFSDHMVLLRAFQAWQKAR--SDGWERVFCEKNFL 836
Query: 875 SAQTLKAIDSLRKQFLFLLKDAGLV----DRNTENCNKWSHDEHLIRAVICAGLFPGLCS 930
S T++ I +R Q L L+ G V + + N S + +++A + AG++P L
Sbjct: 837 SQATMEIIIGMRTQLLGQLRALGFVRARGGADIRDVNVNSENWAVVKAALVAGMYPNLVH 896
Query: 931 VVNKEKSIALKTMEDGQVLLYSNSV--NAGVPKIP 963
V ++E ++ L ++ +V + SV A KIP
Sbjct: 897 V-DRE-NLVLTGPKEKKVRFHPTSVLSQAQYKKIP 929
Score = 467 (169.5 bits), Expect = 5.9e-112, Sum P(2) = 5.9e-112
Identities = 100/226 (44%), Positives = 138/226 (61%)
Query: 293 FRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICT 352
FR+SLP +++++ ++K I EN+VV++ GETG GKTTQ+PQ++L+ E G C I CT
Sbjct: 99 FRQSLPVFEKKEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCYE--NGVPCRIFCT 156
Query: 353 QPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXX 412
QPRR++ +AV+ERVAAER EK+G++VGY++RLE T L FCT GI
Sbjct: 157 QPRRLAVIAVAERVAAERREKVGQTVGYQIRLESRVSPRTLLTFCTNGILLRTLMAGDSA 216
Query: 413 XG-VTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPML 471
VTHVIVDE+HER DFLLI SA L+A LF YFG P++
Sbjct: 217 LSTVTHVIVDEVHERDRFSDFLLIKLRDILQNQTNLKLIISSAALDANLFIKYFGSCPVI 276
Query: 472 HIPGFTYPVRAYFLENILEMTRYRLNTYNQIDDYGQEKSWKMQKQA 517
HI G + V+ FLE+IL T Y T ++ Y +EK + ++Q+
Sbjct: 277 HIQGRPFEVKEMFLEDILRSTGY---TNKEMIKYKKEKQREEKQQS 319
Score = 73 (30.8 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 34/157 (21%), Positives = 63/157 (40%)
Query: 854 DGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDE 913
DGW+ ++ + + + LR L ++ G D N N S +
Sbjct: 824 DGWERVFCEKNFLSQATMEIIIGMRTQLLGQLRA--LGFVRARGGADIRDVNVN--SENW 879
Query: 914 HLIRAVICAGLFPGLCSVVN--------KEKSIAL---KTMEDGQV--LLYSNSVNAGVP 960
+++A + AG++P L V KEK + + Q + SN A V
Sbjct: 880 AVVKAALVAGMYPNLVHVDRENLVLTGPKEKKVRFHPTSVLSQAQYKKIPPSNGQAAAVQ 939
Query: 961 KIPYPWLVFNEKIKVNSVF-LRDSTGVSDSVLLLFGG 996
+P WL+++E + + + +R + V+ + LF G
Sbjct: 940 ALPTDWLIYDEMTRAHRIANIRCCSVVTPVTVALFSG 976
Score = 37 (18.1 bits), Expect = 6.4e-39, Sum P(2) = 6.4e-39
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 880 KAIDSLRKQFLFLLKDAGLVD-RNTE 904
K IDS + F F+L + VD R++E
Sbjct: 390 KDIDSFAQVFHFILTENVSVDYRHSE 415
>FB|FBgn0032883 [details] [associations]
symbol:CG9323 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0002151 "G-quadruplex RNA binding"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0002151
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GeneTree:ENSGT00550000074257 KO:K14442 EMBL:AY095176
RefSeq:NP_610056.1 UniGene:Dm.11353 SMR:Q8SWT2 MINT:MINT-935813
EnsemblMetazoa:FBtr0081459 GeneID:35339 KEGG:dme:Dmel_CG9323
UCSC:CG9323-RA FlyBase:FBgn0032883 InParanoid:Q8SWT2 OMA:PLGMHLA
OrthoDB:EOG4HQC07 GenomeRNAi:35339 NextBio:793041 Uniprot:Q8SWT2
Length = 942
Score = 1095 (390.5 bits), Expect = 6.8e-111, P = 6.8e-111
Identities = 272/834 (32%), Positives = 438/834 (52%)
Query: 199 DEKRPQ-R---EVILPFGLLREVDAHLKAY--------LSQKYINASMSS-LSNVGSTTN 245
+ K PQ R V P G+L V ++ Y + K ++A ++ S
Sbjct: 46 ESKEPQIRLGCNVSAPSGVLERVKELMEDYSRAPSRQNVDDKNVDAKFQQQFRHLLSVNF 105
Query: 246 DEGLYEQQEQLVQNSVVRERILRQRSLQMHEKQQAWQESPEGQKMLEFRRSLPSYKERDA 305
+E + E +E+ V + L +R LQ+ Q+ +E+ +K LE R+ LP+ K D
Sbjct: 106 EEFVAETKERNADLDWVNPK-LDER-LQLELGQRQLEEN--AKKRLEARKKLPTMKYADD 161
Query: 306 LLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAVSER 365
+++A+ ENQV+++ G TGCGKTTQ+PQ +L+ ++C IICTQPRRISA+A++E
Sbjct: 162 IIQAVRENQVILIVGSTGCGKTTQVPQILLDDAISRGCASSCRIICTQPRRISAIAIAEW 221
Query: 366 VAAERGEKLGESVGYKVRLEGMKGRD-TRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIH 424
V+ ER E LG SVGY++RLE K R+ + +CTTG+ ++ +I+DEIH
Sbjct: 222 VSYERCESLGNSVGYQIRLESRKARERASITYCTTGVLLQQLQSDPLMHNLSVLILDEIH 281
Query: 425 ERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYF 484
ER + D L+ + MSAT+ + F YF PM I G +PV+ +
Sbjct: 282 ERSVETDLLMGLLKVILPHRPDLKVILMSATVREQDFCDYFNNCPMFRIEGVMFPVKMLY 341
Query: 485 LENILEMTRYRLNTYNQIDDYGQEKSWKMQKQALA---LRKRKSSIASAVEDALEAADFR 541
LE++L T Y + +M+ +A+ LR+ ++S S V D L
Sbjct: 342 LEDVLSKTNYEFQKFRDRRPKRDPPERRMKHEAMIEPYLRRIRNSYDSRVLDKL------ 395
Query: 542 EYSVQTQQSLSCWNPDSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQLQAHP 601
+ +S C + I F I ++ +I + E GA+LVF+ G+D I+ L + L P
Sbjct: 396 ----RLPESEGC---EDIDF--IADLVYYICENEPEGAILVFLPGYDKISQLYNILDK-P 445
Query: 602 LLGDPSR----VLLLACHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVI 657
R + + H M S EQ+ +F +P G RK++++T +AETS+TI+DVV+VI
Sbjct: 446 KTSKGQRWRDHMAVFPLHSLMQSGEQQAVFRRPPAGQRKVIISTIIAETSVTIDDVVYVI 505
Query: 658 DCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQ 717
+ G+ K T+YD N L W++K V+PG CY+L+ R D D
Sbjct: 506 NSGRTKATNYDIETNIQSLDEVWVTKANTQQRRGRAGRVRPGICYNLFSRAREDRMDDIP 565
Query: 718 LPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLT 777
PE+LR+ L+S+ L +K L + FL + P P ++K +E L+ I ALD+ LT
Sbjct: 566 TPEILRSKLESIILSLKLLHIDDPYRFLQTLINAPNPEAIKMGVELLKRIEALDQTGTLT 625
Query: 778 VLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQ 837
LG +L+ LP++P++GKM+++ A+F CLDP+ + A LS + PF P K+ + K +
Sbjct: 626 PLGMHLAKLPIDPQMGKMILMSALFCCLDPITSAAAALSFKSPFYSPLGKESRVDEIKRR 685
Query: 838 FSARDYSDHLALVRAYDGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAG 897
+ SDHL + ++D+ + ++C+KNFLS+ TL+ ++ ++ QF LL +
Sbjct: 686 MARNMRSDHLMVHNTIIAYRDSRYSHAERDFCYKNFLSSMTLQQLERMKNQFSELLYNYK 745
Query: 898 -LVDRNTENC--NKWSHDEHLIRAVICAGLFPGLC------SVVNKEKSIALKTMEDGQ- 947
L N ++ NK S L+RA+I AGL+P + + N+ ++I +DG+
Sbjct: 746 FLASSNCKDAASNKNSEKIPLLRAIIGAGLYPNMAHLRKSRQIKNRVRAIHTMATDDGRR 805
Query: 948 VLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVSDSVLLLFGGNISRG 1001
V + +SVN+G + V+ ++ K +FL DST V L++FG + G
Sbjct: 806 VNFHPSSVNSGESGFDSAYFVYFQRQKSTDLFLLDSTMVFPMALIIFGDGVEAG 859
>UNIPROTKB|E2QZR7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882 OMA:RAFWESS
EMBL:AAEX03007702 Ensembl:ENSCAFT00000000357 Uniprot:E2QZR7
Length = 1376
Score = 696 (250.1 bits), Expect = 9.0e-111, Sum P(2) = 9.0e-111
Identities = 159/438 (36%), Positives = 255/438 (58%)
Query: 554 WNPDSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQL--QAHPLLGDPSRVLL 611
++ + + +LI H+L +I A+L+F+ G+D+I L+D++ + R +
Sbjct: 599 FDDEKVDLDLIMHLLYNICHGCHKCAILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQV 658
Query: 612 LACHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALN 671
H +M +S+Q+ + P GVRKI+L+TN+AETSIT+NDVVFVID GK KE S+DALN
Sbjct: 659 FMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALN 718
Query: 672 NTPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCL 731
L WISK +PG C+ L+ R + ++Q PELLR PLQ LCL
Sbjct: 719 FVTMLKMVWISKASAVQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCL 778
Query: 732 QIKSLQLGS--ISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVE 789
K L + I++FL +A +PP L V+NA++ L+ I A+D E+LT LG +L+ LPVE
Sbjct: 779 HTKLLAPVNCPIADFLMKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVE 838
Query: 790 PKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFD--KKDLAESAKAQFSARDYSDHL 847
P LGKM++ + CLDP++T+ L+ RDPF++P +K A + +F+A +SDH+
Sbjct: 839 PHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHM 898
Query: 848 ALVRAYDGWKDAERHQSGYE--YCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDR---- 901
AL+RA+ W+ A G+E +C KNFLS T++ I +R Q L L+ +G V
Sbjct: 899 ALLRAFQAWQKAR--SDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGG 956
Query: 902 NTENCNKWSHDEHLIRAVICAGLFPGLCSVVNKEKSIALKTMEDGQVLLY-SNSVNAGVP 960
+ + N S + +++A + AG++P L V ++E ++ L +D ++ + +V+ V
Sbjct: 957 DIRDVNTNSENWAVVKAALVAGMYPNLVHV-DRE-NVVLTGPKDSRIWRTPTQTVSMSVW 1014
Query: 961 KIPYPWLVFNEKIKVNSV 978
+ + + E +KV+ +
Sbjct: 1015 NVCVYFFCY-EMVKVDGI 1031
Score = 439 (159.6 bits), Expect = 9.0e-111, Sum P(2) = 9.0e-111
Identities = 94/227 (41%), Positives = 138/227 (60%)
Query: 293 FRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICT 352
FR+SLP +++++ ++K I EN+VV++ GETG GKTTQ+PQ++L+ + G C I CT
Sbjct: 188 FRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFK--NGIPCRIFCT 245
Query: 353 QPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMK-GRDTRLMFCTTGIXXXXXXXXXX 411
QPRR++A+AV+ERVAAER E++G+++GY++RLE + T L FCT G+
Sbjct: 246 QPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRRVSPKTLLTFCTNGVLLRTLMAGDS 305
Query: 412 XXG-VTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPM 470
VTHVIVDE+HER DFLL SA L+ LF YFG P+
Sbjct: 306 TLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPV 365
Query: 471 LHIPGFTYPVRAYFLENILEMTRYRLNTYNQIDDYGQEKSWKMQKQA 517
++I G + V+ FLE+IL T Y T ++ Y +EK + ++Q+
Sbjct: 366 IYIQGRPFEVKEMFLEDILRTTGY---TNKEMLKYKKEKQREEKQQS 409
>DICTYBASE|DDB_G0267516 [details] [associations]
symbol:dhx57 "RWD domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908
PROSITE:PS51194 SMART:SM00490 SMART:SM00591 SMART:SM00847
dictyBase:DDB_G0267516 GO:GO:0005524 GenomeReviews:CM000150_GR
EMBL:AAFI02000003 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13026
RefSeq:XP_647095.1 ProteinModelPortal:Q55GT9
EnsemblProtists:DDB0235268 GeneID:8615899 KEGG:ddi:DDB_G0267516
OMA:EVHERST Uniprot:Q55GT9
Length = 1451
Score = 962 (343.7 bits), Expect = 1.3e-110, Sum P(4) = 1.3e-110
Identities = 229/695 (32%), Positives = 378/695 (54%)
Query: 227 QKYINASMSSLSNVGSTTNDEGLYEQQEQLVQNSVVRERILRQRSLQMHEKQQAWQESPE 286
QK N + ++ +N + N+ Y ++ L + +E++ + L+ +E + + +
Sbjct: 563 QKQQNNNNNNNNNNNNNNNNNNNYNYKKVLNE----KEKLKINKELK-NEYDRLIKVD-K 616
Query: 287 GQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAA 346
G +++ R SLP +K + LK + ENQVVV++ ETGCGK+TQ+PQYILES +G+
Sbjct: 617 G--VIKKRESLPVFKRKKEFLKCLQENQVVVITAETGCGKSTQIPQYILESFISQEKGSE 674
Query: 347 CSIICTQPRRISAMAVSERVAAERG-----EKLGESVGYKVRLEGMKGRDTRLMFCTTGI 401
C+I+CTQPRRISA+ V+ERV+ E +G VGY++R E + + TRL+FCTTGI
Sbjct: 675 CNIVCTQPRRISAIGVAERVSYEWNCGTVENSIGGLVGYQIRNESKRSQSTRLLFCTTGI 734
Query: 402 XXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELF 461
++H+I+DE+HER + DFLLI+ MSATLNA+
Sbjct: 735 LLRRILDVSNISDLSHIIIDEVHERSTDNDFLLIILREIISKRKDLKIILMSATLNAKQI 794
Query: 462 SSYFGGAP--MLHIPGFTYPVRAYFLENILEMTRYRLNTYNQIDDYGQEKSWKMQKQALA 519
++YF + IPGFT+PV+ ++ +L + +N YN ++K
Sbjct: 795 ANYFKCTDDSIFSIPGFTFPVKNIYINEVLPL----INKYNP--------NYKDSITTTT 842
Query: 520 LRKRKSSIASAVEDALEAADFREYSVQTQQSLSCWNPDSIGFNLIEHVLCHIVKKERPGA 579
++ ED E + + ++ N D + +LI H++ ++KK++ +
Sbjct: 843 TTTTTTTTNDTNEDEEEILNNKLNQLKISIDQKRINLDVVE-SLILHLVNGVLKKDK--S 899
Query: 580 VLVFMTGWDDINSLKDQLQAHPLLGDPS----RVLLLACHGSMASSEQRLIFDKPEDGVR 635
+LVF+ G DI L +L P+ R+ + H S++ +Q+ +F+K +G
Sbjct: 900 ILVFVPGLSDILELCSRL-GKPISTFTEAICQRIWCVPLHSSLSPKDQQKVFEKAPNGRV 958
Query: 636 KIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXXX 695
K+V+ATN+AETSITI DV V+DCG+ + +++++ + W SK
Sbjct: 959 KVVIATNIAETSITIEDVEIVVDCGRVNQMTFNSITGNSVMSEEWTSKASCRQRAGRAGR 1018
Query: 696 VQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGS----ISEFLSRALQP 751
G C+ ++ + + D PE+LRT LQ LCL +K + I +FL+RA++P
Sbjct: 1019 TSSGLCFKVFTKSMESQLQDQDTPEILRTSLQQLCLHVKLFLKNNKNTTIQDFLNRAIEP 1078
Query: 752 PEPLSVKNAIEYLQIIGALDENEN----LTVLGRNLSMLPVEPKLGKMLILGAIFNCLDP 807
P ++++I L I AL N+ LT LG +L+ LPV+ +GKML+ G IF CLDP
Sbjct: 1079 PSSEQIQSSINELISIDALKINQQQQQELTPLGYHLASLPVDVYIGKMLLFGCIFRCLDP 1138
Query: 808 VMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYE 867
++T+ A L+ + PFL P DK + K FS+ + SDH L+ AY+ W+ + + + Y+
Sbjct: 1139 ILTIAATLNYKSPFLNPPDKT-IRPMDK--FSSPNQSDHQTLINAYNSWRKSIQDGNEYQ 1195
Query: 868 YCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRN 902
+C +N+LS TL+ I L+ QF+ +L + G + ++
Sbjct: 1196 FCRENYLSIPTLRTIQDLKLQFVEILSEIGFLPQS 1230
Score = 95 (38.5 bits), Expect = 1.3e-110, Sum P(4) = 1.3e-110
Identities = 20/54 (37%), Positives = 33/54 (61%)
Query: 947 QVLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVSDSVLLLF--GGNI 998
+V ++ S N + YP++++N+K+K + +FL T +S LLLF GGNI
Sbjct: 1329 RVFIHPRSTNFKEGEWVYPFIIYNDKVKTSKLFLHHITNLSPLTLLLFSLGGNI 1382
Score = 56 (24.8 bits), Expect = 1.3e-110, Sum P(4) = 1.3e-110
Identities = 14/65 (21%), Positives = 31/65 (47%)
Query: 216 EVDAHLKAYLSQKYINASMSSLSNVGSTTNDEGLYEQQEQLVQNSVVR-ERILRQRSLQM 274
E+ K YL+ +N + + N TND+ + EQ +++++N ++ + I ++
Sbjct: 382 ELIVFFKVYLNLFKLNENNN---NNNQFTNDDDIKEQSKEIIENEILALQSIYMNNEIEF 438
Query: 275 HEKQQ 279
Q
Sbjct: 439 SSNNQ 443
Score = 48 (22.0 bits), Expect = 1.3e-110, Sum P(4) = 1.3e-110
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 907 NKWSHDEHLIRAVICAGLFPGLCSV 931
N S +I +V+CAG++P + +
Sbjct: 1264 NSNSSKSKIITSVLCAGMYPKIARI 1288
>UNIPROTKB|J9P3P6 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047198
Uniprot:J9P3P6
Length = 1135
Score = 661 (237.7 bits), Expect = 3.4e-109, Sum P(2) = 3.4e-109
Identities = 149/385 (38%), Positives = 219/385 (56%)
Query: 558 SIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQLQAHPLLG-DPSRVLLLACHG 616
++ +L+ ++ HI + PG +L F+ GW +I ++ +LQ LG S+ L+L H
Sbjct: 649 ALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQE--ALGMHESKYLILPVHS 706
Query: 617 SMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCL 676
++ +Q+ IF +P GVRKIVLATN+AETSIT+ND+V V+D G KE YD CL
Sbjct: 707 NIPMMDQKAIFQQPPVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCL 766
Query: 677 LPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIK-S 735
W+S+ Q G YHL+PR + +Q+PE+LRTPL++L LQ K
Sbjct: 767 ETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIH 826
Query: 736 LQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKM 795
+ + EFLS+A+ P +V A+ LQ IG LD+ E LT LG+ L+ + +P+L K
Sbjct: 827 MPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKA 886
Query: 796 LILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDG 855
++L AIF CL P++ VV+ L+ RDPF + + KA S SDHLA VRA G
Sbjct: 887 IVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAG 945
Query: 856 WKDAERHQ---SGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTE------NC 906
W++ R Q S Y +N L A +L+ I L KQF + +A LV + ++ C
Sbjct: 946 WEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLASAQC 1005
Query: 907 NKWSHDEHLIRAVICAGLFPGLCSV 931
N++S +E L++ V+ AGL+P L V
Sbjct: 1006 NEYSEEEELVKGVLMAGLYPNLIQV 1030
Score = 485 (175.8 bits), Expect = 3.4e-109, Sum P(2) = 3.4e-109
Identities = 115/297 (38%), Positives = 167/297 (56%)
Query: 200 EKRPQREVILPFGLLREVDAHLKAY-LSQKYINASMSSLSN-VGSTTNDEGLYEQQ---E 254
++RP + +P +LR+++ L Y + +I+ + S+ + D G +
Sbjct: 342 QRRPCT-IQVPEPILRKIETFLNHYPVDSSWISPELRLQSDDILPLGKDSGPLSDPITGK 400
Query: 255 QLVQNSVVRERILRQRSLQMHEKQ-QAWQESPEGQKMLEFRRSLPSYKERDALLKAISEN 313
V S E L Q L++ ++ WQE+P+ LP RD +L AI ++
Sbjct: 401 PYVPLSEAEEVRLSQNLLELWRRRGPVWQEAPQ----------LPVDPHRDTILNAIEQH 450
Query: 314 QVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEK 373
VVV+SG+TGCGKTT++PQ +LE RGA C++I TQPRRISA++V++RV+ E G
Sbjct: 451 PVVVISGDTGCGKTTRIPQLLLERYVSEGRGARCNVIITQPRRISAVSVAQRVSHELGPS 510
Query: 374 LGESVGYKVRLEGMK-GRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDF 432
L +VG++VRLE R L+FCT GI GV+HVIVDE+HER +N DF
Sbjct: 511 LRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDF 570
Query: 433 LLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYFLENIL 489
LLI+ MSAT + E FS YFGG P++ +PGF YPV+ ++LE+IL
Sbjct: 571 LLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDIL 627
Score = 311 (114.5 bits), Expect = 4.8e-70, Sum P(2) = 4.8e-70
Identities = 88/278 (31%), Positives = 147/278 (52%)
Query: 743 EFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIF 802
EFLS+A+ P +V A+ LQ IG LD+ E LT LG+ L+ + +P+L K ++L AIF
Sbjct: 834 EFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIF 893
Query: 803 NCLDPVMTVVAGLSVR--DPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDG---WK 857
CL P++ VV+ L+ L + D ++ + S D+ + V ++ W+
Sbjct: 894 RCLHPLLVVVSCLTRDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQ 953
Query: 858 DAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTE------NCNKWSH 911
D ++ Y +N L A +L+ I L KQF + +A LV + ++ CN++S
Sbjct: 954 DRSSREN---YLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLASAQCNEYSE 1010
Query: 912 DEHLIRAVICAGLFPGLCSVVN---------KEKSIALKTMEDGQVLLYSNSVNAGVPKI 962
+E L++ V+ AGL+P L V K S+ +T + G +LL+ +++N ++
Sbjct: 1011 EEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRT-KSGNILLHKSTINREATRL 1069
Query: 963 PYPWLVFNEKIKVN-SVFLRDSTGVSD-SVLLLFGGNI 998
WL + +K N SVF+RDS+ V +VLLL G++
Sbjct: 1070 RSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDGDV 1107
Score = 38 (18.4 bits), Expect = 3.2e-22, Sum P(2) = 3.2e-22
Identities = 10/43 (23%), Positives = 24/43 (55%)
Query: 169 LATRMGLHSRQYAKVVVFSKAPLPNYRSDLDEKRPQ--REVIL 209
L +G+H +Y + V S P+ + ++ + ++ P R+++L
Sbjct: 688 LQEALGMHESKYLILPVHSNIPMMDQKA-IFQQPPVGVRKIVL 729
>UNIPROTKB|F1N0J0 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00717186 UniGene:Bt.24588 OMA:LHKEERY
EMBL:DAAA02054438 Ensembl:ENSBTAT00000030623 Uniprot:F1N0J0
Length = 1220
Score = 668 (240.2 bits), Expect = 3.7e-109, Sum P(2) = 3.7e-109
Identities = 151/385 (39%), Positives = 220/385 (57%)
Query: 558 SIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQLQAHPLLG-DPSRVLLLACHG 616
++ +L+ ++ HI + PG +L F+ GW +I ++ +LQ LG S+ L+L H
Sbjct: 675 ALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQE--ALGMHESKYLILPVHS 732
Query: 617 SMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCL 676
++ +Q+ IF +P GVRKIVLATN+AETSITIND+V V+D G KE YD CL
Sbjct: 733 NIPMMDQKAIFQQPPIGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCL 792
Query: 677 LPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIK-S 735
W+S+ Q G YHL+PR + A +Q+PE+LRTPL++L LQ K
Sbjct: 793 ETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMAPFQVPEILRTPLENLVLQAKIH 852
Query: 736 LQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKM 795
+ + EFLS+A+ P +V A+ LQ IG LD+ E LT LG+ L+ + +P+L K
Sbjct: 853 MPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKA 912
Query: 796 LILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDG 855
++L AIF CL P++ VV+ L+ RDPF + + KA S SDHLA VRA G
Sbjct: 913 IVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVSG 971
Query: 856 WKDAERHQ---SGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTE------NC 906
W++ R Q S Y +N L A +L+ I L KQF + +A LV + ++ C
Sbjct: 972 WEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLASAQC 1031
Query: 907 NKWSHDEHLIRAVICAGLFPGLCSV 931
N++S +E L++ V+ AGL+P L V
Sbjct: 1032 NEYSEEEELVKGVLMAGLYPNLIQV 1056
Score = 478 (173.3 bits), Expect = 3.7e-109, Sum P(2) = 3.7e-109
Identities = 112/297 (37%), Positives = 167/297 (56%)
Query: 200 EKRPQREVILPFGLLREVDAHLKAY-LSQKYINASMSSLS-NVGSTTNDEGLYEQQ---E 254
++RP + +P +LR+++ L Y + +I++ + ++ D G +
Sbjct: 368 QRRPCT-IQVPEPILRKIETFLNHYPVESSWISSELRLQGEDILPLGKDSGPLSDPITGK 426
Query: 255 QLVQNSVVRERILRQRSLQMHEKQ-QAWQESPEGQKMLEFRRSLPSYKERDALLKAISEN 313
V S E L Q L++ ++ WQE+P+ LP RD +L AI ++
Sbjct: 427 PYVPLSEAEELRLSQSLLELWRRRGPVWQEAPQ----------LPVDPHRDTILNAIEQH 476
Query: 314 QVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEK 373
VVV++G+TGCGKTT++PQ +LE RGA C++I TQPRRISA++V++RV+ E G
Sbjct: 477 PVVVIAGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPS 536
Query: 374 LGESVGYKVRLEGMK-GRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDF 432
L +VG++VRLE R L+FCT GI GV+HV+VDE+HER +N DF
Sbjct: 537 LRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGVSHVVVDEVHERDVNTDF 596
Query: 433 LLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYFLENIL 489
LLI+ MSAT + E FS YFGG P++ +PGF YPV+ ++LE+IL
Sbjct: 597 LLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDIL 653
Score = 311 (114.5 bits), Expect = 4.0e-69, Sum P(2) = 4.0e-69
Identities = 88/278 (31%), Positives = 147/278 (52%)
Query: 743 EFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIF 802
EFLS+A+ P +V A+ LQ IG LD+ E LT LG+ L+ + +P+L K ++L AIF
Sbjct: 860 EFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIF 919
Query: 803 NCLDPVMTVVAGLSVR--DPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDG---WK 857
CL P++ VV+ L+ L + D ++ + S D+ + V ++ W+
Sbjct: 920 RCLHPLLVVVSCLTRDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVSGWEEVLRWQ 979
Query: 858 DAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTE------NCNKWSH 911
D ++ Y +N L A +L+ I L KQF + +A LV + ++ CN++S
Sbjct: 980 DRSSREN---YLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLASAQCNEYSE 1036
Query: 912 DEHLIRAVICAGLFPGLCSVVN---------KEKSIALKTMEDGQVLLYSNSVNAGVPKI 962
+E L++ V+ AGL+P L V K S+ +T + G +LL+ +++N ++
Sbjct: 1037 EEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRT-KSGNILLHKSTINREATRL 1095
Query: 963 PYPWLVFNEKIKVN-SVFLRDSTGVSD-SVLLLFGGNI 998
WL + +K N SVF+RDS+ V +VLLL G++
Sbjct: 1096 RSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDGDV 1133
Score = 40 (19.1 bits), Expect = 5.8e-63, Sum P(2) = 5.8e-63
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 351 CTQPRRISAMAVSERVAAERGEKLGESV 378
C++P R A +E E GE G V
Sbjct: 39 CSRPDRTQEAAEAEAAPGEPGEGDGSVV 66
Score = 38 (18.4 bits), Expect = 4.0e-22, Sum P(2) = 4.0e-22
Identities = 10/43 (23%), Positives = 24/43 (55%)
Query: 169 LATRMGLHSRQYAKVVVFSKAPLPNYRSDLDEKRP--QREVIL 209
L +G+H +Y + V S P+ + ++ + ++ P R+++L
Sbjct: 714 LQEALGMHESKYLILPVHSNIPMMDQKA-IFQQPPIGVRKIVL 755
>UNIPROTKB|J9P264 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047330
Uniprot:J9P264
Length = 1219
Score = 661 (237.7 bits), Expect = 6.2e-109, Sum P(2) = 6.2e-109
Identities = 149/385 (38%), Positives = 219/385 (56%)
Query: 558 SIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQLQAHPLLG-DPSRVLLLACHG 616
++ +L+ ++ HI + PG +L F+ GW +I ++ +LQ LG S+ L+L H
Sbjct: 680 ALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQE--ALGMHESKYLILPVHS 737
Query: 617 SMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCL 676
++ +Q+ IF +P GVRKIVLATN+AETSIT+ND+V V+D G KE YD CL
Sbjct: 738 NIPMMDQKAIFQQPPVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCL 797
Query: 677 LPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIK-S 735
W+S+ Q G YHL+PR + +Q+PE+LRTPL++L LQ K
Sbjct: 798 ETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIH 857
Query: 736 LQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKM 795
+ + EFLS+A+ P +V A+ LQ IG LD+ E LT LG+ L+ + +P+L K
Sbjct: 858 MPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKA 917
Query: 796 LILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDG 855
++L AIF CL P++ VV+ L+ RDPF + + KA S SDHLA VRA G
Sbjct: 918 IVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAG 976
Query: 856 WKDAERHQ---SGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTE------NC 906
W++ R Q S Y +N L A +L+ I L KQF + +A LV + ++ C
Sbjct: 977 WEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLASAQC 1036
Query: 907 NKWSHDEHLIRAVICAGLFPGLCSV 931
N++S +E L++ V+ AGL+P L V
Sbjct: 1037 NEYSEEEELVKGVLMAGLYPNLIQV 1061
Score = 485 (175.8 bits), Expect = 6.2e-109, Sum P(2) = 6.2e-109
Identities = 115/297 (38%), Positives = 167/297 (56%)
Query: 200 EKRPQREVILPFGLLREVDAHLKAY-LSQKYINASMSSLSN-VGSTTNDEGLYEQQ---E 254
++RP + +P +LR+++ L Y + +I+ + S+ + D G +
Sbjct: 370 QRRPCT-IQVPEPILRKIETFLNHYPVDSSWISPELRLQSDDILPLGKDSGPLSDPITGK 428
Query: 255 QLVQNSVVRERILRQRSLQMHEKQ-QAWQESPEGQKMLEFRRSLPSYKERDALLKAISEN 313
V S E L Q L++ ++ WQE+P+ LP RD +L AI ++
Sbjct: 429 PYVPLSEAEEVRLSQNLLELWRRRGPVWQEAPQ----------LPVDPHRDTILNAIEQH 478
Query: 314 QVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEK 373
VVV+SG+TGCGKTT++PQ +LE RGA C++I TQPRRISA++V++RV+ E G
Sbjct: 479 PVVVISGDTGCGKTTRIPQLLLERYVSEGRGARCNVIITQPRRISAVSVAQRVSHELGPS 538
Query: 374 LGESVGYKVRLEGMK-GRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDF 432
L +VG++VRLE R L+FCT GI GV+HVIVDE+HER +N DF
Sbjct: 539 LRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDF 598
Query: 433 LLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYFLENIL 489
LLI+ MSAT + E FS YFGG P++ +PGF YPV+ ++LE+IL
Sbjct: 599 LLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDIL 655
Score = 311 (114.5 bits), Expect = 6.6e-70, Sum P(2) = 6.6e-70
Identities = 88/278 (31%), Positives = 147/278 (52%)
Query: 743 EFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIF 802
EFLS+A+ P +V A+ LQ IG LD+ E LT LG+ L+ + +P+L K ++L AIF
Sbjct: 865 EFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIF 924
Query: 803 NCLDPVMTVVAGLSVR--DPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDG---WK 857
CL P++ VV+ L+ L + D ++ + S D+ + V ++ W+
Sbjct: 925 RCLHPLLVVVSCLTRDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQ 984
Query: 858 DAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTE------NCNKWSH 911
D ++ Y +N L A +L+ I L KQF + +A LV + ++ CN++S
Sbjct: 985 DRSSREN---YLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLASAQCNEYSE 1041
Query: 912 DEHLIRAVICAGLFPGLCSVVN---------KEKSIALKTMEDGQVLLYSNSVNAGVPKI 962
+E L++ V+ AGL+P L V K S+ +T + G +LL+ +++N ++
Sbjct: 1042 EEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRT-KSGNILLHKSTINREATRL 1100
Query: 963 PYPWLVFNEKIKVN-SVFLRDSTGVSD-SVLLLFGGNI 998
WL + +K N SVF+RDS+ V +VLLL G++
Sbjct: 1101 RSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDGDV 1138
Score = 38 (18.4 bits), Expect = 3.9e-22, Sum P(2) = 3.9e-22
Identities = 10/43 (23%), Positives = 24/43 (55%)
Query: 169 LATRMGLHSRQYAKVVVFSKAPLPNYRSDLDEKRPQ--REVIL 209
L +G+H +Y + V S P+ + ++ + ++ P R+++L
Sbjct: 719 LQEALGMHESKYLILPVHSNIPMMDQKA-IFQQPPVGVRKIVL 760
>UNIPROTKB|E2RL62 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:AAEX03012236
Ensembl:ENSCAFT00000020710 NextBio:20852259 Uniprot:E2RL62
Length = 1222
Score = 661 (237.7 bits), Expect = 6.3e-109, Sum P(2) = 6.3e-109
Identities = 149/385 (38%), Positives = 219/385 (56%)
Query: 558 SIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQLQAHPLLG-DPSRVLLLACHG 616
++ +L+ ++ HI + PG +L F+ GW +I ++ +LQ LG S+ L+L H
Sbjct: 677 ALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQE--ALGMHESKYLILPVHS 734
Query: 617 SMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCL 676
++ +Q+ IF +P GVRKIVLATN+AETSIT+ND+V V+D G KE YD CL
Sbjct: 735 NIPMMDQKAIFQQPPVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCL 794
Query: 677 LPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIK-S 735
W+S+ Q G YHL+PR + +Q+PE+LRTPL++L LQ K
Sbjct: 795 ETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIH 854
Query: 736 LQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKM 795
+ + EFLS+A+ P +V A+ LQ IG LD+ E LT LG+ L+ + +P+L K
Sbjct: 855 MPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKA 914
Query: 796 LILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDG 855
++L AIF CL P++ VV+ L+ RDPF + + KA S SDHLA VRA G
Sbjct: 915 IVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAG 973
Query: 856 WKDAERHQ---SGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTE------NC 906
W++ R Q S Y +N L A +L+ I L KQF + +A LV + ++ C
Sbjct: 974 WEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLASAQC 1033
Query: 907 NKWSHDEHLIRAVICAGLFPGLCSV 931
N++S +E L++ V+ AGL+P L V
Sbjct: 1034 NEYSEEEELVKGVLMAGLYPNLIQV 1058
Score = 485 (175.8 bits), Expect = 6.3e-109, Sum P(2) = 6.3e-109
Identities = 115/297 (38%), Positives = 167/297 (56%)
Query: 200 EKRPQREVILPFGLLREVDAHLKAY-LSQKYINASMSSLSN-VGSTTNDEGLYEQQ---E 254
++RP + +P +LR+++ L Y + +I+ + S+ + D G +
Sbjct: 370 QRRPCT-IQVPEPILRKIETFLNHYPVDSSWISPELRLQSDDILPLGKDSGPLSDPITGK 428
Query: 255 QLVQNSVVRERILRQRSLQMHEKQ-QAWQESPEGQKMLEFRRSLPSYKERDALLKAISEN 313
V S E L Q L++ ++ WQE+P+ LP RD +L AI ++
Sbjct: 429 PYVPLSEAEEVRLSQNLLELWRRRGPVWQEAPQ----------LPVDPHRDTILNAIEQH 478
Query: 314 QVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEK 373
VVV+SG+TGCGKTT++PQ +LE RGA C++I TQPRRISA++V++RV+ E G
Sbjct: 479 PVVVISGDTGCGKTTRIPQLLLERYVSEGRGARCNVIITQPRRISAVSVAQRVSHELGPS 538
Query: 374 LGESVGYKVRLEGMK-GRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDF 432
L +VG++VRLE R L+FCT GI GV+HVIVDE+HER +N DF
Sbjct: 539 LRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDF 598
Query: 433 LLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYFLENIL 489
LLI+ MSAT + E FS YFGG P++ +PGF YPV+ ++LE+IL
Sbjct: 599 LLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDIL 655
Score = 311 (114.5 bits), Expect = 6.7e-70, Sum P(2) = 6.7e-70
Identities = 88/278 (31%), Positives = 147/278 (52%)
Query: 743 EFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIF 802
EFLS+A+ P +V A+ LQ IG LD+ E LT LG+ L+ + +P+L K ++L AIF
Sbjct: 862 EFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIF 921
Query: 803 NCLDPVMTVVAGLSVR--DPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDG---WK 857
CL P++ VV+ L+ L + D ++ + S D+ + V ++ W+
Sbjct: 922 RCLHPLLVVVSCLTRDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQ 981
Query: 858 DAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTE------NCNKWSH 911
D ++ Y +N L A +L+ I L KQF + +A LV + ++ CN++S
Sbjct: 982 DRSSREN---YLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLASAQCNEYSE 1038
Query: 912 DEHLIRAVICAGLFPGLCSVVN---------KEKSIALKTMEDGQVLLYSNSVNAGVPKI 962
+E L++ V+ AGL+P L V K S+ +T + G +LL+ +++N ++
Sbjct: 1039 EEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRT-KSGNILLHKSTINREATRL 1097
Query: 963 PYPWLVFNEKIKVN-SVFLRDSTGVSD-SVLLLFGGNI 998
WL + +K N SVF+RDS+ V +VLLL G++
Sbjct: 1098 RSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDGDV 1135
Score = 38 (18.4 bits), Expect = 4.0e-22, Sum P(2) = 4.0e-22
Identities = 10/43 (23%), Positives = 24/43 (55%)
Query: 169 LATRMGLHSRQYAKVVVFSKAPLPNYRSDLDEKRPQ--REVIL 209
L +G+H +Y + V S P+ + ++ + ++ P R+++L
Sbjct: 716 LQEALGMHESKYLILPVHSNIPMMDQKA-IFQQPPVGVRKIVL 757
>RGD|1308888 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA;ISO;ISS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA;ISO;ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOGENOM:HOG000112212 HOVERGEN:HBG081437 KO:K13185 OrthoDB:EOG4VHK5M
EMBL:BC091359 IPI:IPI00949701 RefSeq:NP_001013267.1
UniGene:Rn.163034 ProteinModelPortal:Q5BJS0 SMR:Q5BJS0
PhosphoSite:Q5BJS0 PRIDE:Q5BJS0 Ensembl:ENSRNOT00000064600
GeneID:367172 KEGG:rno:367172 UCSC:RGD:1308888 NextBio:690809
ArrayExpress:Q5BJS0 Genevestigator:Q5BJS0
GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 660 (237.4 bits), Expect = 1.2e-108, Sum P(2) = 1.2e-108
Identities = 149/385 (38%), Positives = 219/385 (56%)
Query: 558 SIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQLQAHPLLG-DPSRVLLLACHG 616
++ +L+ ++ HI + PG +L F+ GW +I ++ +LQ LG S+ L+L H
Sbjct: 649 ALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQE--ALGMHESKYLILPVHS 706
Query: 617 SMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCL 676
++ +Q+ IF +P GVRKIVLATN+AETSIT+ND+V V+D G KE YD CL
Sbjct: 707 NIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCL 766
Query: 677 LPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIK-S 735
W+S+ Q G YHL+PR + +Q+PE+LRTPL++L LQ K
Sbjct: 767 ETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIH 826
Query: 736 LQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKM 795
+ + EFLS+A+ P +V A+ LQ IG LD+ E LT LG+ L+ + +P+L K
Sbjct: 827 MPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKA 886
Query: 796 LILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDG 855
++L AIF CL P++ VV+ L+ RDPF + + KA S SDHLA VRA G
Sbjct: 887 IVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAG 945
Query: 856 WKDAERHQ---SGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTE------NC 906
W++ R Q S Y +N L A +L+ I L KQF + +A LV + ++ C
Sbjct: 946 WEEVLRWQDRTSRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLPSAQC 1005
Query: 907 NKWSHDEHLIRAVICAGLFPGLCSV 931
N++S +E L++ V+ AGL+P L V
Sbjct: 1006 NEYSEEEELVKGVLMAGLYPNLIQV 1030
Score = 483 (175.1 bits), Expect = 1.2e-108, Sum P(2) = 1.2e-108
Identities = 115/297 (38%), Positives = 168/297 (56%)
Query: 200 EKRPQREVILPFGLLREVDAHLKAY-LSQKYINASMSSLSN-VGSTTNDEGLYEQQ---E 254
++RP + +P +LR+++A L Y + +I+ + S+ + D G +
Sbjct: 342 QRRPCT-IQVPEPILRKIEAFLSHYPVDSSWISPELRLQSDDILPLGKDSGPLSDPITGK 400
Query: 255 QLVQNSVVRERILRQRSLQMHEKQ-QAWQESPEGQKMLEFRRSLPSYKERDALLKAISEN 313
+ S E L Q L++ ++ WQE+P+ LP RD +L AI ++
Sbjct: 401 PYMPLSEAEEVRLSQSLLELWRRRGPIWQEAPQ----------LPVDPHRDTILSAIEQH 450
Query: 314 QVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEK 373
VVV+SG+TGCGKTT++PQ +LE RGA C++I TQPRRISA++V++RV+ E G
Sbjct: 451 PVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPS 510
Query: 374 LGESVGYKVRLEGMK-GRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDF 432
L +VG++VRLE R L+FCT GI GV+HVIVDE+HER +N DF
Sbjct: 511 LRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDF 570
Query: 433 LLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYFLENIL 489
LLI+ MSAT + E FS YFGG P++ +PGF YPV+ ++LE+IL
Sbjct: 571 LLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDIL 627
Score = 310 (114.2 bits), Expect = 1.3e-69, Sum P(2) = 1.3e-69
Identities = 88/278 (31%), Positives = 147/278 (52%)
Query: 743 EFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIF 802
EFLS+A+ P +V A+ LQ IG LD+ E LT LG+ L+ + +P+L K ++L AIF
Sbjct: 834 EFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIF 893
Query: 803 NCLDPVMTVVAGLSVR--DPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDG---WK 857
CL P++ VV+ L+ L + D ++ + S D+ + V ++ W+
Sbjct: 894 RCLHPLLVVVSCLTRDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQ 953
Query: 858 DAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTE------NCNKWSH 911
D ++ Y +N L A +L+ I L KQF + +A LV + ++ CN++S
Sbjct: 954 DRTSREN---YLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLPSAQCNEYSE 1010
Query: 912 DEHLIRAVICAGLFPGLCSVVN---------KEKSIALKTMEDGQVLLYSNSVNAGVPKI 962
+E L++ V+ AGL+P L V K S+ +T + G +LL+ +++N ++
Sbjct: 1011 EEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRT-KSGNILLHKSTINREATRL 1069
Query: 963 PYPWLVFNEKIKVN-SVFLRDSTGVSD-SVLLLFGGNI 998
WL + +K N SVF+RDS+ V +VLLL G++
Sbjct: 1070 RSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDGDV 1107
Score = 38 (18.4 bits), Expect = 4.7e-22, Sum P(2) = 4.7e-22
Identities = 10/43 (23%), Positives = 24/43 (55%)
Query: 169 LATRMGLHSRQYAKVVVFSKAPLPNYRSDLDEKRPQ--REVIL 209
L +G+H +Y + V S P+ + ++ + ++ P R+++L
Sbjct: 688 LQEALGMHESKYLILPVHSNIPMMDQKA-IFQQPPLGVRKIVL 729
>UNIPROTKB|Q5BJS0 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1308888 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:BC091359 IPI:IPI00949701
RefSeq:NP_001013267.1 UniGene:Rn.163034 ProteinModelPortal:Q5BJS0
SMR:Q5BJS0 PhosphoSite:Q5BJS0 PRIDE:Q5BJS0
Ensembl:ENSRNOT00000064600 GeneID:367172 KEGG:rno:367172
UCSC:RGD:1308888 NextBio:690809 ArrayExpress:Q5BJS0
Genevestigator:Q5BJS0 GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 660 (237.4 bits), Expect = 1.2e-108, Sum P(2) = 1.2e-108
Identities = 149/385 (38%), Positives = 219/385 (56%)
Query: 558 SIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQLQAHPLLG-DPSRVLLLACHG 616
++ +L+ ++ HI + PG +L F+ GW +I ++ +LQ LG S+ L+L H
Sbjct: 649 ALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQE--ALGMHESKYLILPVHS 706
Query: 617 SMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCL 676
++ +Q+ IF +P GVRKIVLATN+AETSIT+ND+V V+D G KE YD CL
Sbjct: 707 NIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCL 766
Query: 677 LPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIK-S 735
W+S+ Q G YHL+PR + +Q+PE+LRTPL++L LQ K
Sbjct: 767 ETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIH 826
Query: 736 LQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKM 795
+ + EFLS+A+ P +V A+ LQ IG LD+ E LT LG+ L+ + +P+L K
Sbjct: 827 MPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKA 886
Query: 796 LILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDG 855
++L AIF CL P++ VV+ L+ RDPF + + KA S SDHLA VRA G
Sbjct: 887 IVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAG 945
Query: 856 WKDAERHQ---SGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTE------NC 906
W++ R Q S Y +N L A +L+ I L KQF + +A LV + ++ C
Sbjct: 946 WEEVLRWQDRTSRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLPSAQC 1005
Query: 907 NKWSHDEHLIRAVICAGLFPGLCSV 931
N++S +E L++ V+ AGL+P L V
Sbjct: 1006 NEYSEEEELVKGVLMAGLYPNLIQV 1030
Score = 483 (175.1 bits), Expect = 1.2e-108, Sum P(2) = 1.2e-108
Identities = 115/297 (38%), Positives = 168/297 (56%)
Query: 200 EKRPQREVILPFGLLREVDAHLKAY-LSQKYINASMSSLSN-VGSTTNDEGLYEQQ---E 254
++RP + +P +LR+++A L Y + +I+ + S+ + D G +
Sbjct: 342 QRRPCT-IQVPEPILRKIEAFLSHYPVDSSWISPELRLQSDDILPLGKDSGPLSDPITGK 400
Query: 255 QLVQNSVVRERILRQRSLQMHEKQ-QAWQESPEGQKMLEFRRSLPSYKERDALLKAISEN 313
+ S E L Q L++ ++ WQE+P+ LP RD +L AI ++
Sbjct: 401 PYMPLSEAEEVRLSQSLLELWRRRGPIWQEAPQ----------LPVDPHRDTILSAIEQH 450
Query: 314 QVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEK 373
VVV+SG+TGCGKTT++PQ +LE RGA C++I TQPRRISA++V++RV+ E G
Sbjct: 451 PVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPS 510
Query: 374 LGESVGYKVRLEGMK-GRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDF 432
L +VG++VRLE R L+FCT GI GV+HVIVDE+HER +N DF
Sbjct: 511 LRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDF 570
Query: 433 LLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYFLENIL 489
LLI+ MSAT + E FS YFGG P++ +PGF YPV+ ++LE+IL
Sbjct: 571 LLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDIL 627
Score = 310 (114.2 bits), Expect = 1.3e-69, Sum P(2) = 1.3e-69
Identities = 88/278 (31%), Positives = 147/278 (52%)
Query: 743 EFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIF 802
EFLS+A+ P +V A+ LQ IG LD+ E LT LG+ L+ + +P+L K ++L AIF
Sbjct: 834 EFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIF 893
Query: 803 NCLDPVMTVVAGLSVR--DPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDG---WK 857
CL P++ VV+ L+ L + D ++ + S D+ + V ++ W+
Sbjct: 894 RCLHPLLVVVSCLTRDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQ 953
Query: 858 DAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTE------NCNKWSH 911
D ++ Y +N L A +L+ I L KQF + +A LV + ++ CN++S
Sbjct: 954 DRTSREN---YLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLPSAQCNEYSE 1010
Query: 912 DEHLIRAVICAGLFPGLCSVVN---------KEKSIALKTMEDGQVLLYSNSVNAGVPKI 962
+E L++ V+ AGL+P L V K S+ +T + G +LL+ +++N ++
Sbjct: 1011 EEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRT-KSGNILLHKSTINREATRL 1069
Query: 963 PYPWLVFNEKIKVN-SVFLRDSTGVSD-SVLLLFGGNI 998
WL + +K N SVF+RDS+ V +VLLL G++
Sbjct: 1070 RSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDGDV 1107
Score = 38 (18.4 bits), Expect = 4.7e-22, Sum P(2) = 4.7e-22
Identities = 10/43 (23%), Positives = 24/43 (55%)
Query: 169 LATRMGLHSRQYAKVVVFSKAPLPNYRSDLDEKRPQ--REVIL 209
L +G+H +Y + V S P+ + ++ + ++ P R+++L
Sbjct: 688 LQEALGMHESKYLILPVHSNIPMMDQKA-IFQQPPLGVRKIVL 729
>UNIPROTKB|F1SLI4 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:CU633694 Ensembl:ENSSSCT00000012419
Uniprot:F1SLI4
Length = 1222
Score = 664 (238.8 bits), Expect = 1.3e-108, Sum P(2) = 1.3e-108
Identities = 150/385 (38%), Positives = 219/385 (56%)
Query: 558 SIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQLQAHPLLG-DPSRVLLLACHG 616
++ +L+ ++ HI + PG +L F+ GW +I ++ +LQ LG S+ L+L H
Sbjct: 677 ALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQE--ALGMHESKYLILPVHS 734
Query: 617 SMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCL 676
++ +Q+ IF +P GVRKIVLATN+AETSITIND+V V+D G KE YD CL
Sbjct: 735 NIPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCL 794
Query: 677 LPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIK-S 735
W+S+ Q G YHL+PR + +Q+PE+LRTPL++L LQ K
Sbjct: 795 ETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIH 854
Query: 736 LQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKM 795
+ + EFLS+A+ P +V A+ LQ IG LD+ E LT LG+ L+ + +P+L K
Sbjct: 855 MPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKA 914
Query: 796 LILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDG 855
++L AIF CL P++ VV+ L+ RDPF + + KA S SDHLA VRA G
Sbjct: 915 IVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVSG 973
Query: 856 WKDAERHQ---SGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTE------NC 906
W++ R Q S Y +N L A +L+ I L KQF + +A LV + ++ C
Sbjct: 974 WEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLASAQC 1033
Query: 907 NKWSHDEHLIRAVICAGLFPGLCSV 931
N++S +E L++ V+ AGL+P L V
Sbjct: 1034 NEYSEEEELVKGVLMAGLYPNLIQV 1058
Score = 478 (173.3 bits), Expect = 1.3e-108, Sum P(2) = 1.3e-108
Identities = 113/297 (38%), Positives = 166/297 (55%)
Query: 200 EKRPQREVILPFGLLREVDAHLKAY-LSQKYINASMSSLSN-VGSTTNDEGLYEQQ---E 254
++RP + +P +LR+++ L Y + +I+ + + + D G +
Sbjct: 370 QRRPCT-IQVPEPILRKIETFLNHYPVDNSWISPELRLQGDDILPLGKDSGPLSDPITGK 428
Query: 255 QLVQNSVVRERILRQRSLQMHEKQ-QAWQESPEGQKMLEFRRSLPSYKERDALLKAISEN 313
V S E L Q L++ ++ WQE+P+ LP RD +L AI ++
Sbjct: 429 PYVPLSEAEELRLSQNLLELWRRRGPVWQEAPQ----------LPVDPHRDTILNAIEQH 478
Query: 314 QVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEK 373
VVV++G+TGCGKTT++PQ +LE RGA C++I TQPRRISA++V++RV+ E G
Sbjct: 479 PVVVIAGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPS 538
Query: 374 LGESVGYKVRLEGMK-GRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDF 432
L +VG++VRLE R L+FCT GI GV+HVIVDE+HER +N DF
Sbjct: 539 LRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDF 598
Query: 433 LLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYFLENIL 489
LLI+ MSAT + E FS YFGG P++ +PGF YPV+ ++LE+IL
Sbjct: 599 LLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDIL 655
Score = 311 (114.5 bits), Expect = 4.0e-69, Sum P(2) = 4.0e-69
Identities = 88/278 (31%), Positives = 147/278 (52%)
Query: 743 EFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIF 802
EFLS+A+ P +V A+ LQ IG LD+ E LT LG+ L+ + +P+L K ++L AIF
Sbjct: 862 EFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIF 921
Query: 803 NCLDPVMTVVAGLSVR--DPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDG---WK 857
CL P++ VV+ L+ L + D ++ + S D+ + V ++ W+
Sbjct: 922 RCLHPLLVVVSCLTRDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVSGWEEVLRWQ 981
Query: 858 DAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTE------NCNKWSH 911
D ++ Y +N L A +L+ I L KQF + +A LV + ++ CN++S
Sbjct: 982 DRSSREN---YLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLASAQCNEYSE 1038
Query: 912 DEHLIRAVICAGLFPGLCSVVN---------KEKSIALKTMEDGQVLLYSNSVNAGVPKI 962
+E L++ V+ AGL+P L V K S+ +T + G +LL+ +++N ++
Sbjct: 1039 EEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRT-KSGNILLHKSTINREATRL 1097
Query: 963 PYPWLVFNEKIKVN-SVFLRDSTGVSD-SVLLLFGGNI 998
WL + +K N SVF+RDS+ V +VLLL G++
Sbjct: 1098 RSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDGDV 1135
Score = 38 (18.4 bits), Expect = 4.0e-22, Sum P(2) = 4.0e-22
Identities = 10/43 (23%), Positives = 24/43 (55%)
Query: 169 LATRMGLHSRQYAKVVVFSKAPLPNYRSDLDEKRPQ--REVIL 209
L +G+H +Y + V S P+ + ++ + ++ P R+++L
Sbjct: 716 LQEALGMHESKYLILPVHSNIPMMDQKA-IFQQPPVGVRKIVL 757
>MGI|MGI:1920081 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 MGI:MGI:1920081 GO:GO:0005524
GO:GO:0003682 GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OMA:LHKEERY EMBL:AB047557 EMBL:AK146326 EMBL:AK148778
EMBL:AK153969 EMBL:BC004082 EMBL:BC016202 IPI:IPI00127902
IPI:IPI00270064 IPI:IPI00761204 RefSeq:NP_001239611.1
RefSeq:NP_001239612.1 RefSeq:NP_579925.1 UniGene:Mm.276305
ProteinModelPortal:Q99PU8 SMR:Q99PU8 PhosphoSite:Q99PU8
PaxDb:Q99PU8 PRIDE:Q99PU8 Ensembl:ENSMUST00000035056
Ensembl:ENSMUST00000062368 Ensembl:ENSMUST00000111991
Ensembl:ENSMUST00000136969 Ensembl:ENSMUST00000142911
Ensembl:ENSMUST00000148287 Ensembl:ENSMUST00000165596 GeneID:72831
KEGG:mmu:72831 UCSC:uc009rtg.1 UCSC:uc009rth.1 UCSC:uc009rti.1
ChiTaRS:DHX30 NextBio:337009 Bgee:Q99PU8 CleanEx:MM_DHX30
Genevestigator:Q99PU8 GermOnline:ENSMUSG00000032480 Uniprot:Q99PU8
Length = 1217
Score = 660 (237.4 bits), Expect = 1.4e-108, Sum P(2) = 1.4e-108
Identities = 149/385 (38%), Positives = 219/385 (56%)
Query: 558 SIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQLQAHPLLG-DPSRVLLLACHG 616
++ +L+ ++ HI + PG +L F+ GW +I ++ +LQ LG S+ L+L H
Sbjct: 672 ALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQE--ALGMHESKYLILPVHS 729
Query: 617 SMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCL 676
++ +Q+ IF +P GVRKIVLATN+AETSIT+ND+V V+D G KE YD CL
Sbjct: 730 NIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCL 789
Query: 677 LPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIK-S 735
W+S+ Q G YHL+PR + +Q+PE+LRTPL++L LQ K
Sbjct: 790 ETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIH 849
Query: 736 LQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKM 795
+ + EFLS+A+ P +V A+ LQ IG LD+ E LT LG+ L+ + +P+L K
Sbjct: 850 MPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKA 909
Query: 796 LILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDG 855
++L AIF CL P++ VV+ L+ RDPF + + KA S SDHLA VRA G
Sbjct: 910 IVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAG 968
Query: 856 WKDAERHQ---SGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTE------NC 906
W++ R Q S Y +N L A +L+ I L KQF + +A LV + ++ C
Sbjct: 969 WEEVLRWQDRTSRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLPSAQC 1028
Query: 907 NKWSHDEHLIRAVICAGLFPGLCSV 931
N++S +E L++ V+ AGL+P L V
Sbjct: 1029 NEYSEEEELVKGVLMAGLYPNLIQV 1053
Score = 483 (175.1 bits), Expect = 1.4e-108, Sum P(2) = 1.4e-108
Identities = 115/297 (38%), Positives = 168/297 (56%)
Query: 200 EKRPQREVILPFGLLREVDAHLKAY-LSQKYINASMSSLSN-VGSTTNDEGLYEQQ---E 254
++RP + +P +LR+++A L Y + +I+ + S+ + D G +
Sbjct: 365 QRRPCT-IQVPEPILRKIEAFLSHYPVDSSWISPELRLQSDDILPLGKDSGPLSDPITGK 423
Query: 255 QLVQNSVVRERILRQRSLQMHEKQ-QAWQESPEGQKMLEFRRSLPSYKERDALLKAISEN 313
+ S E L Q L++ ++ WQE+P+ LP RD +L AI ++
Sbjct: 424 PYMPLSEAEEVRLSQSLLELWRRRGPIWQEAPQ----------LPVDPHRDTILSAIEQH 473
Query: 314 QVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEK 373
VVV+SG+TGCGKTT++PQ +LE RGA C++I TQPRRISA++V++RV+ E G
Sbjct: 474 PVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPS 533
Query: 374 LGESVGYKVRLEGMK-GRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDF 432
L +VG++VRLE R L+FCT GI GV+HVIVDE+HER +N DF
Sbjct: 534 LRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDF 593
Query: 433 LLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYFLENIL 489
LLI+ MSAT + E FS YFGG P++ +PGF YPV+ ++LE+IL
Sbjct: 594 LLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDIL 650
Score = 310 (114.2 bits), Expect = 1.4e-69, Sum P(2) = 1.4e-69
Identities = 88/278 (31%), Positives = 147/278 (52%)
Query: 743 EFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIF 802
EFLS+A+ P +V A+ LQ IG LD+ E LT LG+ L+ + +P+L K ++L AIF
Sbjct: 857 EFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIF 916
Query: 803 NCLDPVMTVVAGLSVR--DPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDG---WK 857
CL P++ VV+ L+ L + D ++ + S D+ + V ++ W+
Sbjct: 917 RCLHPLLVVVSCLTRDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQ 976
Query: 858 DAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTE------NCNKWSH 911
D ++ Y +N L A +L+ I L KQF + +A LV + ++ CN++S
Sbjct: 977 DRTSREN---YLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLPSAQCNEYSE 1033
Query: 912 DEHLIRAVICAGLFPGLCSVVN---------KEKSIALKTMEDGQVLLYSNSVNAGVPKI 962
+E L++ V+ AGL+P L V K S+ +T + G +LL+ +++N ++
Sbjct: 1034 EEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRT-KSGNILLHKSTINREATRL 1092
Query: 963 PYPWLVFNEKIKVN-SVFLRDSTGVSD-SVLLLFGGNI 998
WL + +K N SVF+RDS+ V +VLLL G++
Sbjct: 1093 RSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDGDV 1130
Score = 38 (18.4 bits), Expect = 5.0e-22, Sum P(2) = 5.0e-22
Identities = 10/43 (23%), Positives = 24/43 (55%)
Query: 169 LATRMGLHSRQYAKVVVFSKAPLPNYRSDLDEKRPQ--REVIL 209
L +G+H +Y + V S P+ + ++ + ++ P R+++L
Sbjct: 711 LQEALGMHESKYLILPVHSNIPMMDQKA-IFQQPPLGVRKIVL 752
>UNIPROTKB|D4A1V3 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676 GO:GO:0042645
EMBL:CH473954 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:LHKEERY
UniGene:Rn.163034 IPI:IPI00203041 Ensembl:ENSRNOT00000045878
Uniprot:D4A1V3
Length = 1222
Score = 660 (237.4 bits), Expect = 1.5e-108, Sum P(2) = 1.5e-108
Identities = 149/385 (38%), Positives = 219/385 (56%)
Query: 558 SIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQLQAHPLLG-DPSRVLLLACHG 616
++ +L+ ++ HI + PG +L F+ GW +I ++ +LQ LG S+ L+L H
Sbjct: 677 ALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQE--ALGMHESKYLILPVHS 734
Query: 617 SMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCL 676
++ +Q+ IF +P GVRKIVLATN+AETSIT+ND+V V+D G KE YD CL
Sbjct: 735 NIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCL 794
Query: 677 LPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIK-S 735
W+S+ Q G YHL+PR + +Q+PE+LRTPL++L LQ K
Sbjct: 795 ETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIH 854
Query: 736 LQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKM 795
+ + EFLS+A+ P +V A+ LQ IG LD+ E LT LG+ L+ + +P+L K
Sbjct: 855 MPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKA 914
Query: 796 LILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDG 855
++L AIF CL P++ VV+ L+ RDPF + + KA S SDHLA VRA G
Sbjct: 915 IVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAG 973
Query: 856 WKDAERHQ---SGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTE------NC 906
W++ R Q S Y +N L A +L+ I L KQF + +A LV + ++ C
Sbjct: 974 WEEVLRWQDRTSRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLPSAQC 1033
Query: 907 NKWSHDEHLIRAVICAGLFPGLCSV 931
N++S +E L++ V+ AGL+P L V
Sbjct: 1034 NEYSEEEELVKGVLMAGLYPNLIQV 1058
Score = 483 (175.1 bits), Expect = 1.5e-108, Sum P(2) = 1.5e-108
Identities = 115/297 (38%), Positives = 168/297 (56%)
Query: 200 EKRPQREVILPFGLLREVDAHLKAY-LSQKYINASMSSLSN-VGSTTNDEGLYEQQ---E 254
++RP + +P +LR+++A L Y + +I+ + S+ + D G +
Sbjct: 370 QRRPCT-IQVPEPILRKIEAFLSHYPVDSSWISPELRLQSDDILPLGKDSGPLSDPITGK 428
Query: 255 QLVQNSVVRERILRQRSLQMHEKQ-QAWQESPEGQKMLEFRRSLPSYKERDALLKAISEN 313
+ S E L Q L++ ++ WQE+P+ LP RD +L AI ++
Sbjct: 429 PYMPLSEAEEVRLSQSLLELWRRRGPIWQEAPQ----------LPVDPHRDTILSAIEQH 478
Query: 314 QVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEK 373
VVV+SG+TGCGKTT++PQ +LE RGA C++I TQPRRISA++V++RV+ E G
Sbjct: 479 PVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPS 538
Query: 374 LGESVGYKVRLEGMK-GRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDF 432
L +VG++VRLE R L+FCT GI GV+HVIVDE+HER +N DF
Sbjct: 539 LRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDF 598
Query: 433 LLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYFLENIL 489
LLI+ MSAT + E FS YFGG P++ +PGF YPV+ ++LE+IL
Sbjct: 599 LLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDIL 655
Score = 310 (114.2 bits), Expect = 1.4e-69, Sum P(2) = 1.4e-69
Identities = 88/278 (31%), Positives = 147/278 (52%)
Query: 743 EFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIF 802
EFLS+A+ P +V A+ LQ IG LD+ E LT LG+ L+ + +P+L K ++L AIF
Sbjct: 862 EFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIF 921
Query: 803 NCLDPVMTVVAGLSVR--DPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDG---WK 857
CL P++ VV+ L+ L + D ++ + S D+ + V ++ W+
Sbjct: 922 RCLHPLLVVVSCLTRDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQ 981
Query: 858 DAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTE------NCNKWSH 911
D ++ Y +N L A +L+ I L KQF + +A LV + ++ CN++S
Sbjct: 982 DRTSREN---YLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLPSAQCNEYSE 1038
Query: 912 DEHLIRAVICAGLFPGLCSVVN---------KEKSIALKTMEDGQVLLYSNSVNAGVPKI 962
+E L++ V+ AGL+P L V K S+ +T + G +LL+ +++N ++
Sbjct: 1039 EEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRT-KSGNILLHKSTINREATRL 1097
Query: 963 PYPWLVFNEKIKVN-SVFLRDSTGVSD-SVLLLFGGNI 998
WL + +K N SVF+RDS+ V +VLLL G++
Sbjct: 1098 RSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDGDV 1135
Score = 38 (18.4 bits), Expect = 5.1e-22, Sum P(2) = 5.1e-22
Identities = 10/43 (23%), Positives = 24/43 (55%)
Query: 169 LATRMGLHSRQYAKVVVFSKAPLPNYRSDLDEKRPQ--REVIL 209
L +G+H +Y + V S P+ + ++ + ++ P R+++L
Sbjct: 716 LQEALGMHESKYLILPVHSNIPMMDQKA-IFQQPPLGVRKIVL 757
>UNIPROTKB|Q2NKY8 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:BC111349
IPI:IPI00717186 RefSeq:NP_001070003.1 UniGene:Bt.24588
ProteinModelPortal:Q2NKY8 SMR:Q2NKY8 PRIDE:Q2NKY8 GeneID:767607
KEGG:bta:767607 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
InParanoid:Q2NKY8 KO:K13185 OrthoDB:EOG4VHK5M NextBio:20918019
Uniprot:Q2NKY8
Length = 1220
Score = 668 (240.2 bits), Expect = 2.0e-108, Sum P(2) = 2.0e-108
Identities = 151/385 (39%), Positives = 220/385 (57%)
Query: 558 SIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQLQAHPLLG-DPSRVLLLACHG 616
++ +L+ ++ HI + PG +L F+ GW +I ++ +LQ LG S+ L+L H
Sbjct: 675 ALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQE--ALGMHESKYLILPVHS 732
Query: 617 SMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCL 676
++ +Q+ IF +P GVRKIVLATN+AETSITIND+V V+D G KE YD CL
Sbjct: 733 NIPMMDQKAIFQQPPIGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCL 792
Query: 677 LPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIK-S 735
W+S+ Q G YHL+PR + A +Q+PE+LRTPL++L LQ K
Sbjct: 793 ETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMAPFQVPEILRTPLENLVLQAKIH 852
Query: 736 LQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKM 795
+ + EFLS+A+ P +V A+ LQ IG LD+ E LT LG+ L+ + +P+L K
Sbjct: 853 MPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKA 912
Query: 796 LILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDG 855
++L AIF CL P++ VV+ L+ RDPF + + KA S SDHLA VRA G
Sbjct: 913 IVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVSG 971
Query: 856 WKDAERHQ---SGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTE------NC 906
W++ R Q S Y +N L A +L+ I L KQF + +A LV + ++ C
Sbjct: 972 WEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLASAQC 1031
Query: 907 NKWSHDEHLIRAVICAGLFPGLCSV 931
N++S +E L++ V+ AGL+P L V
Sbjct: 1032 NEYSEEEELVKGVLMAGLYPNLIQV 1056
Score = 471 (170.9 bits), Expect = 2.0e-108, Sum P(2) = 2.0e-108
Identities = 112/297 (37%), Positives = 166/297 (55%)
Query: 200 EKRPQREVILPFGLLREVDAHLKAY-LSQKYINASMSSLS-NVGSTTNDEGLYEQQ---E 254
++RP + +P +LR+++ L Y + +I++ + ++ D G +
Sbjct: 368 QRRPCT-IQVPEPILRKIETFLNHYPVESSWISSELRLQGEDILPLGKDSGPLSDPITGK 426
Query: 255 QLVQNSVVRERILRQRSLQMHEKQ-QAWQESPEGQKMLEFRRSLPSYKERDALLKAISEN 313
V S E L Q L++ ++ WQE+P+ LP RD +L AI ++
Sbjct: 427 PYVPLSEAEELRLSQSLLELWRRRGPVWQEAPQ----------LPVDPHRDTILNAIEQH 476
Query: 314 QVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEK 373
VVV++G+TGCGKTT++PQ +LE RGA C++I TQPRRISA++V++RV+ E G
Sbjct: 477 PVVVIAGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPT 536
Query: 374 LGESVGYKVRLEGMK-GRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDF 432
L +VG++VRLE R L+FCT GI GV+HV+VDE HER +N DF
Sbjct: 537 LRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGVSHVVVDEEHERDVNTDF 596
Query: 433 LLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYFLENIL 489
LLI+ MSAT + E FS YFGG P++ +PGF YPV+ ++LE+IL
Sbjct: 597 LLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDIL 653
Score = 311 (114.5 bits), Expect = 2.4e-68, Sum P(2) = 2.4e-68
Identities = 88/278 (31%), Positives = 147/278 (52%)
Query: 743 EFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIF 802
EFLS+A+ P +V A+ LQ IG LD+ E LT LG+ L+ + +P+L K ++L AIF
Sbjct: 860 EFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIF 919
Query: 803 NCLDPVMTVVAGLSVR--DPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDG---WK 857
CL P++ VV+ L+ L + D ++ + S D+ + V ++ W+
Sbjct: 920 RCLHPLLVVVSCLTRDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVSGWEEVLRWQ 979
Query: 858 DAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTE------NCNKWSH 911
D ++ Y +N L A +L+ I L KQF + +A LV + ++ CN++S
Sbjct: 980 DRSSREN---YLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLASAQCNEYSE 1036
Query: 912 DEHLIRAVICAGLFPGLCSVVN---------KEKSIALKTMEDGQVLLYSNSVNAGVPKI 962
+E L++ V+ AGL+P L V K S+ +T + G +LL+ +++N ++
Sbjct: 1037 EEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRT-KSGNILLHKSTINREATRL 1095
Query: 963 PYPWLVFNEKIKVN-SVFLRDSTGVSD-SVLLLFGGNI 998
WL + +K N SVF+RDS+ V +VLLL G++
Sbjct: 1096 RSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDGDV 1133
Score = 40 (19.1 bits), Expect = 5.8e-63, Sum P(2) = 5.8e-63
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 351 CTQPRRISAMAVSERVAAERGEKLGESV 378
C++P R A +E E GE G V
Sbjct: 39 CSRPDRTQEAAEAEAAPGEPGEGDGSVV 66
Score = 38 (18.4 bits), Expect = 4.0e-22, Sum P(2) = 4.0e-22
Identities = 10/43 (23%), Positives = 24/43 (55%)
Query: 169 LATRMGLHSRQYAKVVVFSKAPLPNYRSDLDEKRP--QREVIL 209
L +G+H +Y + V S P+ + ++ + ++ P R+++L
Sbjct: 714 LQEALGMHESKYLILPVHSNIPMMDQKA-IFQQPPIGVRKIVL 755
>RGD|1308548 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10116 "Rattus norvegicus" [GO:0001085 "RNA polymerase II
transcription factor binding" evidence=IEA;ISO] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0007623 "circadian rhythm" evidence=IEA;ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA;ISO]
[GO:0034605 "cellular response to heat" evidence=IEA;ISO]
[GO:0070934 "CRD-mediated mRNA stabilization" evidence=IEA;ISO]
[GO:0070937 "CRD-mediated mRNA stability complex" evidence=IEA;ISO]
InterPro:IPR001159 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137
PROSITE:PS51194 SMART:SM00358 SMART:SM00490 SMART:SM00847
InterPro:IPR014720 RGD:1308548 GO:GO:0005524 Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 KO:K13184 OrthoDB:EOG4HHP1J
EMBL:CH473958 IPI:IPI00947663 RefSeq:NP_001100654.1
UniGene:Rn.107359 Ensembl:ENSRNOT00000064860 GeneID:304859
KEGG:rno:304859 UCSC:RGD:1308548 NextBio:653729 Uniprot:D4A9D6
Length = 1174
Score = 663 (238.4 bits), Expect = 3.7e-108, Sum P(2) = 3.7e-108
Identities = 167/464 (35%), Positives = 249/464 (53%)
Query: 542 EYSVQTQQSLSCWNPDSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQLQAHP 601
EY +T+ S+S N F LIE +L +I PGAVLVF+ GW+ I +++ L+ +
Sbjct: 618 EYGPETKLSMSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLENNS 677
Query: 602 LLGDPSRVLLLACHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGK 661
G R +L H + EQR +FD DGV K++L+TN+AETSITINDVV+VID K
Sbjct: 678 HFGS-HRYQILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAETSITINDVVYVIDSCK 736
Query: 662 AKETSYDALNNTPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPEL 721
K + A NN W SK V+PG C+HL R +D + PE+
Sbjct: 737 QKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFDRLETHMTPEM 796
Query: 722 LRTPLQSLCLQIKSLQLGSISEFLSRALQPPEPL-SVKNAIEYLQIIGALDENENLTVLG 780
RTPL + L IK L+LG I +FL++A++PP PL +V A L+ + ALD N+ LT LG
Sbjct: 797 FRTPLHEIALSIKLLRLGGIGQFLAKAIEPP-PLDAVIEAEHTLRELDALDANDELTPLG 855
Query: 781 RNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSA 840
R L+ LP+EP+ GKM+I+G IF D V T+ A +PF+ + K L + F+
Sbjct: 856 RILAKLPIEPRFGKMMIMGCIFYVGDAVCTISAATCFPEPFIS--EGKRLGYIHR-NFAG 912
Query: 841 RDYSDHLALVRAYDGWKDAER--HQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGL 898
+SDH+AL+ + W DA ++ +C + L+ TL+ + Q +L ++G
Sbjct: 913 NRFSDHVALLSVFQAWDDARMSGEEAEIRFCEQKRLNMATLRMTWEAKVQLKEILINSGF 972
Query: 899 VDRN--TENCNKWSHDEHL--IRAVICAGLFPGLCSVVNKEKSIALKTMEDGQVLLYSNS 954
+ T+ D +L + +++ G++P +C +KEK L T E L++ +S
Sbjct: 973 PEDCLLTQVFTNTGPDNNLDVVISLLAFGVYPNVC--YHKEKRKILTT-EGRNALIHKSS 1029
Query: 955 VNAGVP----KIPYPWLVFNEKIKVNSVFLRDSTGVSDSVLLLF 994
VN K P P+ VF EKI+ ++ + T V+ LLLF
Sbjct: 1030 VNCPFSSQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPLQLLLF 1073
Score = 474 (171.9 bits), Expect = 3.7e-108, Sum P(2) = 3.7e-108
Identities = 97/208 (46%), Positives = 133/208 (63%)
Query: 288 QKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAAC 347
Q +L+ R LP K +L+AIS+N VV++ G TGCGKTTQ+PQYIL+ + R A C
Sbjct: 382 QSVLQERELLPVKKFEAEILEAISQNSVVIIRGATGCGKTTQVPQYILDDFIQNDRAAEC 441
Query: 348 SIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRD-TRLMFCTTGIXXXXX 406
+I+ TQPRRISA+AV+ERVA ERGE+ G+S GY VR E + R +MFCT G+
Sbjct: 442 NIVVTQPRRISAVAVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL 501
Query: 407 XXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFG 466
G++HVIVDEIHER +N DFLL+V MSAT++ +F YF
Sbjct: 502 EAGIR--GISHVIVDEIHERDINTDFLLVVLRDVVLAYPEVRIVLMSATIDTTMFCEYFF 559
Query: 467 GAPMLHIPGFTYPVRAYFLENILEMTRY 494
P++ + G T+PV+ YFLE+ ++MT++
Sbjct: 560 NCPIIEVYGRTFPVQEYFLEDCIQMTQF 587
Score = 37 (18.1 bits), Expect = 4.5e-62, Sum P(2) = 4.5e-62
Identities = 13/68 (19%), Positives = 23/68 (33%)
Query: 324 CGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVR 383
CGK P Y + + R + + + M S + + V Y VR
Sbjct: 12 CGKRKMTPAYEIRAVGNKNRQKFMCEVRVEGFNYAGMGNSTNKKDAQSNAARDFVNYLVR 71
Query: 384 LEGMKGRD 391
+ +K +
Sbjct: 72 INEVKSEE 79
>UNIPROTKB|H7BXY3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HGNC:HGNC:16716 EMBL:AC139667 EMBL:AC026318
ProteinModelPortal:H7BXY3 SMR:H7BXY3 PRIDE:H7BXY3
Ensembl:ENST00000348968 Bgee:H7BXY3 Uniprot:H7BXY3
Length = 1166
Score = 662 (238.1 bits), Expect = 4.7e-108, Sum P(2) = 4.7e-108
Identities = 150/385 (38%), Positives = 219/385 (56%)
Query: 558 SIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQLQAHPLLG-DPSRVLLLACHG 616
++ +L+ ++ HI + PG +L F+ GW +I ++ +LQ LG S+ L+L H
Sbjct: 621 ALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQE--ALGMHESKYLILPVHS 678
Query: 617 SMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCL 676
++ +Q+ IF +P GVRKIVLATN+AETSITIND+V V+D G KE YD CL
Sbjct: 679 NIPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCL 738
Query: 677 LPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIK-S 735
W+S+ Q G YHL+PR + +Q+PE+LRTPL++L LQ K
Sbjct: 739 ETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIH 798
Query: 736 LQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKM 795
+ + EFLS+A+ P +V A+ LQ IG LD+ E LT LG+ L+ + +P+L K
Sbjct: 799 MPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKA 858
Query: 796 LILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDG 855
++L AIF CL P++ VV+ L+ RDPF + + KA S SDHLA VRA G
Sbjct: 859 IVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAG 917
Query: 856 WKDAERHQ---SGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTE------NC 906
W++ R Q S Y +N L A +L+ I L KQF + +A LV + ++ C
Sbjct: 918 WEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLASAQC 977
Query: 907 NKWSHDEHLIRAVICAGLFPGLCSV 931
N++S +E L++ V+ AGL+P L V
Sbjct: 978 NEYSEEEELVKGVLMAGLYPNLIQV 1002
Score = 474 (171.9 bits), Expect = 4.7e-108, Sum P(2) = 4.7e-108
Identities = 114/297 (38%), Positives = 165/297 (55%)
Query: 200 EKRPQREVILPFGLLREVDAHLKAY-LSQKYINASMSSLSN-VGSTTNDEGLYEQQ---E 254
++RP + +P +LR+++ L Y + +I + S+ + D G +
Sbjct: 314 QRRPCT-IQVPEPILRKIETFLNHYPVESSWIAPELRLQSDDILPLGKDSGPLSDPITGK 372
Query: 255 QLVQNSVVRERILRQRSLQMHEKQ-QAWQESPEGQKMLEFRRSLPSYKERDALLKAISEN 313
V E L Q L++ ++ WQE+P+ LP RD +L AI ++
Sbjct: 373 PYVPLLEAEEVRLSQSLLELWRRRGPVWQEAPQ----------LPVDPHRDTILNAIEQH 422
Query: 314 QVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEK 373
VVV+SG+TGCGKTT++PQ +LE RGA C++I TQPRRISA++V++RV+ E G
Sbjct: 423 PVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPS 482
Query: 374 LGESVGYKVRLEGMK-GRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDF 432
L +VG++VRLE R L+FCT GI GV+HVIVDE+HER +N DF
Sbjct: 483 LRRNVGFQVRLESKPPSRGGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDF 542
Query: 433 LLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYFLENIL 489
LLI+ MSAT + E FS YFGG P++ +PGF YPV+ ++LE+IL
Sbjct: 543 LLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDIL 599
Score = 311 (114.5 bits), Expect = 9.2e-69, Sum P(2) = 9.2e-69
Identities = 88/278 (31%), Positives = 147/278 (52%)
Query: 743 EFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIF 802
EFLS+A+ P +V A+ LQ IG LD+ E LT LG+ L+ + +P+L K ++L AIF
Sbjct: 806 EFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIF 865
Query: 803 NCLDPVMTVVAGLSVR--DPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDG---WK 857
CL P++ VV+ L+ L + D ++ + S D+ + V ++ W+
Sbjct: 866 RCLHPLLVVVSCLTRDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQ 925
Query: 858 DAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTE------NCNKWSH 911
D ++ Y +N L A +L+ I L KQF + +A LV + ++ CN++S
Sbjct: 926 DRSSREN---YLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLASAQCNEYSE 982
Query: 912 DEHLIRAVICAGLFPGLCSVVN---------KEKSIALKTMEDGQVLLYSNSVNAGVPKI 962
+E L++ V+ AGL+P L V K S+ +T + G +LL+ +++N ++
Sbjct: 983 EEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRT-KSGNILLHKSTINREATRL 1041
Query: 963 PYPWLVFNEKIKVN-SVFLRDSTGVSD-SVLLLFGGNI 998
WL + +K N SVF+RDS+ V +VLLL G++
Sbjct: 1042 RSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDGDV 1079
Score = 38 (18.4 bits), Expect = 3.4e-22, Sum P(2) = 3.4e-22
Identities = 10/43 (23%), Positives = 24/43 (55%)
Query: 169 LATRMGLHSRQYAKVVVFSKAPLPNYRSDLDEKRPQ--REVIL 209
L +G+H +Y + V S P+ + ++ + ++ P R+++L
Sbjct: 660 LQEALGMHESKYLILPVHSNIPMMDQKA-IFQQPPVGVRKIVL 701
>UNIPROTKB|Q5ZI74 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0042645
"mitochondrial nucleoid" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0042645 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AJ720910 IPI:IPI00593383
RefSeq:NP_001012869.1 UniGene:Gga.2762 ProteinModelPortal:Q5ZI74
SMR:Q5ZI74 GeneID:420376 KEGG:gga:420376 InParanoid:Q5ZI74
NextBio:20823291 Uniprot:Q5ZI74
Length = 1231
Score = 651 (234.2 bits), Expect = 5.5e-108, Sum P(2) = 5.5e-108
Identities = 148/384 (38%), Positives = 215/384 (55%)
Query: 559 IGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQLQAHPLLGDP-SRVLLLACHGS 617
+ +LI ++ I PG +L F+ GW +I ++ +L +LG SR L+L H +
Sbjct: 693 LDLDLITDLVLQIDAHGEPGGILCFLPGWQEIKGVQQRLLE--MLGSQNSRYLVLPVHSN 750
Query: 618 MASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLL 677
+ +Q+ IF +P GVRKIVLATN+AETSITIND+V V+D G KE YD CL
Sbjct: 751 IPMMDQQNIFQRPPPGVRKIVLATNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLE 810
Query: 678 PSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIK-SL 736
W+SK Q G YHL+PR D YQ+PE+LRTPL++L +Q K +
Sbjct: 811 TVWVSKSNVVQRRGRAGRCQSGFAYHLFPRSRLDKMPTYQVPEILRTPLENLVVQAKIHM 870
Query: 737 QLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKML 796
+ EFLS+AL P+ +V A+ LQ IG LD+ E LT LG+ L+ + +P+L K +
Sbjct: 871 PEKTAVEFLSKALDSPDIKAVDEAVILLQEIGVLDQREALTTLGKRLAQISTDPRLAKAI 930
Query: 797 ILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGW 856
+L +I+ CL P++ +V+ L+ RDPF + + AKA S SDHLA VRA GW
Sbjct: 931 VLASIYRCLHPLLVIVSCLT-RDPFSSSLQNRAEVDKAKAVLSRESGSDHLAFVRAVAGW 989
Query: 857 KDAERHQSGY---EYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTEN------CN 907
++ R + Y +L +L+ I+ L KQF L +A LV ++ CN
Sbjct: 990 EEVLRRRDSRARDNYLQDYYLYGPSLRFINGLVKQFSENLYEAFLVSSPSDCTMPSSVCN 1049
Query: 908 KWSHDEHLIRAVICAGLFPGLCSV 931
++S +E L++ V+ AGL+P L V
Sbjct: 1050 QYSEEEELVKGVLMAGLYPNLIQV 1073
Score = 489 (177.2 bits), Expect = 5.5e-108, Sum P(2) = 5.5e-108
Identities = 130/378 (34%), Positives = 197/378 (52%)
Query: 137 RWKLTMLLRNKDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNYRS 196
RW M K ++V + K ++L +L GL + + + + + R
Sbjct: 330 RWPCPMTFAAKGRRKVEAENKAAALACQKLKSL----GLVDKNN-NPLSHAMYNMTSLRE 384
Query: 197 DLDEKRPQREVILPFGLLREVDAHLKAYL-----SQKYINASMSSLSNVGSTTNDEGLYE 251
+ +R + +P LR+++ +L Y S+ I M +LS +D +
Sbjct: 385 LGENQRKPCHIKVPEATLRKIENYLNHYPVDIRESRPRIADDMMNLSKESGAISDAITGK 444
Query: 252 QQEQLVQNSVVRERILRQRSLQMHEKQ-QAWQESPEGQKMLEFRRSLPSYKERDALLKAI 310
+++ VR L Q L + +++ +WQES LP +D +L AI
Sbjct: 445 TYIPMLEAEEVR---LSQNLLALWKRRGSSWQES----------HPLPVDPHKDTILSAI 491
Query: 311 SENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAER 370
+N VVV++G+TGCGKTT++PQ +LE RGA C+++ TQPRRISA++V++RVA E
Sbjct: 492 EQNPVVVIAGDTGCGKTTRIPQLLLEHYILEGRGARCNVVITQPRRISAISVAQRVAQEL 551
Query: 371 GEKLGESVGYKVRLEGMK-GRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMN 429
G + ++VGY+VRLE R L+FCT GI GV+HV+VDE+HER +N
Sbjct: 552 GPNMRKNVGYQVRLESKPPARGGALLFCTVGILLRKLQGNPSLEGVSHVVVDEVHERDVN 611
Query: 430 EDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYFLENIL 489
DFLLI+ MSAT + + FS YFGG P++ +PGF YPV+ Y+LE IL
Sbjct: 612 TDFLLILLKGIQKLNPDLRLVLMSATGDNQRFSHYFGGCPVVKVPGFMYPVKEYYLEEIL 671
Query: 490 -EMTRYRLNTYN--QIDD 504
++ R+R Y Q DD
Sbjct: 672 AKLGRHRHRHYEIKQSDD 689
Score = 288 (106.4 bits), Expect = 6.6e-68, Sum P(2) = 6.6e-68
Identities = 83/269 (30%), Positives = 139/269 (51%)
Query: 743 EFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIF 802
EFLS+AL P+ +V A+ LQ IG LD+ E LT LG+ L+ + +P+L K ++L +I+
Sbjct: 877 EFLSKALDSPDIKAVDEAVILLQEIGVLDQREALTTLGKRLAQISTDPRLAKAIVLASIY 936
Query: 803 NCLDPVMTVVAGLSVR--DPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAE 860
CL P++ +V+ L+ L + D A++ ++ S D+ + V ++
Sbjct: 937 RCLHPLLVIVSCLTRDPFSSSLQNRAEVDKAKAVLSRESGSDHLAFVRAVAGWEEVLRRR 996
Query: 861 RHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTEN------CNKWSHDEH 914
++ Y +L +L+ I+ L KQF L +A LV ++ CN++S +E
Sbjct: 997 DSRARDNYLQDYYLYGPSLRFINGLVKQFSENLYEAFLVSSPSDCTMPSSVCNQYSEEEE 1056
Query: 915 LIRAVICAGLFPGLCSVVN---------KEKSIALKTMEDGQVLLYSNSVNAGVPKIPYP 965
L++ V+ AGL+P L V K S A +T + G VLL+ +++N K+
Sbjct: 1057 LVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSYAYRT-KAGTVLLHKSTINREASKLYSR 1115
Query: 966 WLVFNEKIKVNS-VFLRDSTGVSDSVLLL 993
WL + +K N VF+RDS+ V +LL
Sbjct: 1116 WLTYFMAVKSNGGVFVRDSSQVHPLAVLL 1144
>UNIPROTKB|Q7L2E3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0042645 "mitochondrial nucleoid" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AB020697 EMBL:AK002076
EMBL:AK291266 EMBL:BC014237 EMBL:BC015029 EMBL:BC020126
EMBL:BC038417 IPI:IPI00411733 IPI:IPI00926109 IPI:IPI00927809
PIR:E56236 RefSeq:NP_055781.2 RefSeq:NP_619520.1 UniGene:Hs.517948
PDB:2DB2 PDBsum:2DB2 ProteinModelPortal:Q7L2E3 SMR:Q7L2E3
IntAct:Q7L2E3 MINT:MINT-1186537 STRING:Q7L2E3 PhosphoSite:Q7L2E3
DMDM:74758997 PaxDb:Q7L2E3 PRIDE:Q7L2E3 DNASU:22907
Ensembl:ENST00000445061 Ensembl:ENST00000446256
Ensembl:ENST00000457607 GeneID:22907 KEGG:hsa:22907 UCSC:uc003crt.3
UCSC:uc003cru.3 GeneCards:GC03P047844 HGNC:HGNC:16716 HPA:HPA034806
neXtProt:NX_Q7L2E3 PharmGKB:PA27217 InParanoid:Q7L2E3 OMA:LHKEERY
PhylomeDB:Q7L2E3 EvolutionaryTrace:Q7L2E3 GenomeRNAi:22907
NextBio:43571 ArrayExpress:Q7L2E3 Bgee:Q7L2E3 CleanEx:HS_DHX30
Genevestigator:Q7L2E3 Uniprot:Q7L2E3
Length = 1194
Score = 662 (238.1 bits), Expect = 5.7e-108, Sum P(2) = 5.7e-108
Identities = 150/385 (38%), Positives = 219/385 (56%)
Query: 558 SIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQLQAHPLLG-DPSRVLLLACHG 616
++ +L+ ++ HI + PG +L F+ GW +I ++ +LQ LG S+ L+L H
Sbjct: 649 ALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQE--ALGMHESKYLILPVHS 706
Query: 617 SMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCL 676
++ +Q+ IF +P GVRKIVLATN+AETSITIND+V V+D G KE YD CL
Sbjct: 707 NIPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCL 766
Query: 677 LPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIK-S 735
W+S+ Q G YHL+PR + +Q+PE+LRTPL++L LQ K
Sbjct: 767 ETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIH 826
Query: 736 LQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKM 795
+ + EFLS+A+ P +V A+ LQ IG LD+ E LT LG+ L+ + +P+L K
Sbjct: 827 MPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKA 886
Query: 796 LILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDG 855
++L AIF CL P++ VV+ L+ RDPF + + KA S SDHLA VRA G
Sbjct: 887 IVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAG 945
Query: 856 WKDAERHQ---SGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTE------NC 906
W++ R Q S Y +N L A +L+ I L KQF + +A LV + ++ C
Sbjct: 946 WEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLASAQC 1005
Query: 907 NKWSHDEHLIRAVICAGLFPGLCSV 931
N++S +E L++ V+ AGL+P L V
Sbjct: 1006 NEYSEEEELVKGVLMAGLYPNLIQV 1030
Score = 474 (171.9 bits), Expect = 5.7e-108, Sum P(2) = 5.7e-108
Identities = 114/297 (38%), Positives = 165/297 (55%)
Query: 200 EKRPQREVILPFGLLREVDAHLKAY-LSQKYINASMSSLSN-VGSTTNDEGLYEQQ---E 254
++RP + +P +LR+++ L Y + +I + S+ + D G +
Sbjct: 342 QRRPCT-IQVPEPILRKIETFLNHYPVESSWIAPELRLQSDDILPLGKDSGPLSDPITGK 400
Query: 255 QLVQNSVVRERILRQRSLQMHEKQ-QAWQESPEGQKMLEFRRSLPSYKERDALLKAISEN 313
V E L Q L++ ++ WQE+P+ LP RD +L AI ++
Sbjct: 401 PYVPLLEAEEVRLSQSLLELWRRRGPVWQEAPQ----------LPVDPHRDTILNAIEQH 450
Query: 314 QVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEK 373
VVV+SG+TGCGKTT++PQ +LE RGA C++I TQPRRISA++V++RV+ E G
Sbjct: 451 PVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPS 510
Query: 374 LGESVGYKVRLEGMK-GRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDF 432
L +VG++VRLE R L+FCT GI GV+HVIVDE+HER +N DF
Sbjct: 511 LRRNVGFQVRLESKPPSRGGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDF 570
Query: 433 LLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYFLENIL 489
LLI+ MSAT + E FS YFGG P++ +PGF YPV+ ++LE+IL
Sbjct: 571 LLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDIL 627
Score = 311 (114.5 bits), Expect = 1.0e-68, Sum P(2) = 1.0e-68
Identities = 88/278 (31%), Positives = 147/278 (52%)
Query: 743 EFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIF 802
EFLS+A+ P +V A+ LQ IG LD+ E LT LG+ L+ + +P+L K ++L AIF
Sbjct: 834 EFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIF 893
Query: 803 NCLDPVMTVVAGLSVR--DPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDG---WK 857
CL P++ VV+ L+ L + D ++ + S D+ + V ++ W+
Sbjct: 894 RCLHPLLVVVSCLTRDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQ 953
Query: 858 DAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTE------NCNKWSH 911
D ++ Y +N L A +L+ I L KQF + +A LV + ++ CN++S
Sbjct: 954 DRSSREN---YLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLASAQCNEYSE 1010
Query: 912 DEHLIRAVICAGLFPGLCSVVN---------KEKSIALKTMEDGQVLLYSNSVNAGVPKI 962
+E L++ V+ AGL+P L V K S+ +T + G +LL+ +++N ++
Sbjct: 1011 EEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRT-KSGNILLHKSTINREATRL 1069
Query: 963 PYPWLVFNEKIKVN-SVFLRDSTGVSD-SVLLLFGGNI 998
WL + +K N SVF+RDS+ V +VLLL G++
Sbjct: 1070 RSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDGDV 1107
Score = 38 (18.4 bits), Expect = 3.7e-22, Sum P(2) = 3.7e-22
Identities = 10/43 (23%), Positives = 24/43 (55%)
Query: 169 LATRMGLHSRQYAKVVVFSKAPLPNYRSDLDEKRPQ--REVIL 209
L +G+H +Y + V S P+ + ++ + ++ P R+++L
Sbjct: 688 LQEALGMHESKYLILPVHSNIPMMDQKA-IFQQPPVGVRKIVL 729
>UNIPROTKB|Q5R607 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9601 "Pongo abelii" [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0042645 "mitochondrial nucleoid" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOVERGEN:HBG081437 KO:K13185 EMBL:CR858337 EMBL:CR860693
RefSeq:NP_001125306.1 UniGene:Pab.19257 ProteinModelPortal:Q5R607
SMR:Q5R607 PRIDE:Q5R607 GeneID:100172205 KEGG:pon:100172205
InParanoid:Q5R607 Uniprot:Q5R607
Length = 1194
Score = 660 (237.4 bits), Expect = 1.1e-107, Sum P(2) = 1.1e-107
Identities = 150/385 (38%), Positives = 218/385 (56%)
Query: 558 SIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQLQAHPLLG-DPSRVLLLACHG 616
++ +L+ ++ HI + PG +L F+ GW +I ++ +LQ LG S+ L+L H
Sbjct: 649 ALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQE--ALGMHESKYLILPVHS 706
Query: 617 SMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCL 676
++ +Q+ IF +P GVRKIVLATN+AETS TIND+V V+D G KE YD CL
Sbjct: 707 NIPMMDQKAIFQQPPVGVRKIVLATNIAETSTTINDIVHVVDSGLHKEERYDLKTKVSCL 766
Query: 677 LPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIK-S 735
W+S+ Q G YHL+PR + +Q+PE+LRTPL++L LQ K
Sbjct: 767 ETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIH 826
Query: 736 LQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKM 795
+ + EFLS+A+ P +V A+ LQ IG LD+ E LT LG+ L+ + EP+L K
Sbjct: 827 MPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTEPRLAKA 886
Query: 796 LILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDG 855
++L AIF CL P++ VV+ L+ RDPF + + KA S SDHLA VRA G
Sbjct: 887 IVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAG 945
Query: 856 WKDAERHQ---SGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTE------NC 906
W++ R Q S Y +N L A +L+ I L KQF + +A LV + ++ C
Sbjct: 946 WEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLASAQC 1005
Query: 907 NKWSHDEHLIRAVICAGLFPGLCSV 931
N++S +E L++ V+ AGL+P L V
Sbjct: 1006 NEYSEEEELVKGVLMAGLYPNLIQV 1030
Score = 474 (171.9 bits), Expect = 1.1e-107, Sum P(2) = 1.1e-107
Identities = 114/297 (38%), Positives = 165/297 (55%)
Query: 200 EKRPQREVILPFGLLREVDAHLKAY-LSQKYINASMSSLSN-VGSTTNDEGLYEQQ---E 254
++RP + +P +LR+++ L Y + +I + S+ + D G +
Sbjct: 342 QRRPCT-IQVPEPILRKIETFLNHYPVESSWIAPELRLQSDDILPLGKDSGPLSDPITGK 400
Query: 255 QLVQNSVVRERILRQRSLQMHEKQ-QAWQESPEGQKMLEFRRSLPSYKERDALLKAISEN 313
V E L Q L++ ++ WQE+P+ LP RD +L AI ++
Sbjct: 401 PYVPLLEAEEVRLSQSLLELWRRRGPVWQEAPQ----------LPVDPHRDTILNAIEQH 450
Query: 314 QVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEK 373
VVV+SG+TGCGKTT++PQ +LE RGA C++I TQPRRISA++V++RV+ E G
Sbjct: 451 PVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPS 510
Query: 374 LGESVGYKVRLEGMK-GRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDF 432
L +VG++VRLE R L+FCT GI GV+HVIVDE+HER +N DF
Sbjct: 511 LRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDF 570
Query: 433 LLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYFLENIL 489
LLI+ MSAT + E FS YFGG P++ +PGF YPV+ ++LE+IL
Sbjct: 571 LLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDIL 627
Score = 314 (115.6 bits), Expect = 4.9e-69, Sum P(2) = 4.9e-69
Identities = 89/278 (32%), Positives = 147/278 (52%)
Query: 743 EFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIF 802
EFLS+A+ P +V A+ LQ IG LD+ E LT LG+ L+ + EP+L K ++L AIF
Sbjct: 834 EFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTEPRLAKAIVLAAIF 893
Query: 803 NCLDPVMTVVAGLSVR--DPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDG---WK 857
CL P++ VV+ L+ L + D ++ + S D+ + V ++ W+
Sbjct: 894 RCLHPLLVVVSCLTRDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQ 953
Query: 858 DAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTE------NCNKWSH 911
D ++ Y +N L A +L+ I L KQF + +A LV + ++ CN++S
Sbjct: 954 DRSSREN---YLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLASAQCNEYSE 1010
Query: 912 DEHLIRAVICAGLFPGLCSVVN---------KEKSIALKTMEDGQVLLYSNSVNAGVPKI 962
+E L++ V+ AGL+P L V K S+ +T + G +LL+ +++N ++
Sbjct: 1011 EEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRT-KSGNILLHKSTINREATRL 1069
Query: 963 PYPWLVFNEKIKVN-SVFLRDSTGVSD-SVLLLFGGNI 998
WL + +K N SVF+RDS+ V +VLLL G++
Sbjct: 1070 RSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDGDV 1107
Score = 38 (18.4 bits), Expect = 1.8e-22, Sum P(2) = 1.8e-22
Identities = 10/43 (23%), Positives = 24/43 (55%)
Query: 169 LATRMGLHSRQYAKVVVFSKAPLPNYRSDLDEKRPQ--REVIL 209
L +G+H +Y + V S P+ + ++ + ++ P R+++L
Sbjct: 688 LQEALGMHESKYLILPVHSNIPMMDQKA-IFQQPPVGVRKIVL 729
>UNIPROTKB|G4MR96 [details] [associations]
symbol:MGG_04709 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001231 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003710833.1
EnsemblFungi:MGG_04709T0 GeneID:2677908 KEGG:mgr:MGG_04709
Uniprot:G4MR96
Length = 1504
Score = 1052 (375.4 bits), Expect = 2.1e-107, Sum P(2) = 2.1e-107
Identities = 254/653 (38%), Positives = 378/653 (57%)
Query: 278 QQAWQE---SPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYI 334
Q+ W + SP Q ML R LP + R+ +L A+ ++QVV+V GETGCGK+TQ+P ++
Sbjct: 669 QRIWYDKSSSPRYQNMLRSRMQLPMWAFREQVLSAVDQHQVVIVCGETGCGKSTQVPSFL 728
Query: 335 LESETEAARGAACSIICTQPRRISAMAVSERVAAERGE---KLGES---VGYKVRLEGMK 388
LE + A+G AC I CT+PRRISA++++ RV+ E GE LG S VGY +RLE
Sbjct: 729 LEHQL--AQGKACKIYCTEPRRISAISLARRVSEELGEGRNDLGTSRSLVGYSIRLEANT 786
Query: 389 GRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXX 448
R+TRL+F TTGI +TH+++DE+HER ++ DFLLIV
Sbjct: 787 SRETRLVFATTGIVMRMLEGSNDLRDITHLVLDEVHERSIDSDFLLIVLKKLMTRRKDLK 846
Query: 449 XXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYFLENILEMTRYRLNTYNQIDDYGQE 508
MSAT++A+ FS+Y GAP+L++PG T+PV+ FLE+ +E+T Y T +Q QE
Sbjct: 847 VVLMSATVDADRFSNYLDGAPVLNVPGRTFPVQVNFLEDAVELTGY---TIDQ--KVPQE 901
Query: 509 KSWKMQKQALALRKRKSSIASAVEDALEAADFREYSVQTQQSLSCWNPDSIGFNLIEHVL 568
+ ++ + A + +SS + + +L+ YS +T+ +L+ + I F+LI ++
Sbjct: 902 RLVEIDEDAEV--EPESSSKTELLKSLKG-----YSTRTRNTLAQMDEYKIDFDLIVQLI 954
Query: 569 CHIVK----KERPGAVLVFMTGWDDINSLKDQLQAHPLLGDPS---RVLLLACHGSMASS 621
I ++ A+LVF+ G +I +L D L LGD S L+ H ++A+
Sbjct: 955 SRIASDPNYQDYSKAILVFLPGIAEIRTLNDLL-----LGDRSFQQNWLVYPLHSTIATE 1009
Query: 622 EQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWI 681
EQ F P G+RKIVLATN+AET ITI DV VID GK +E +D L+ ++I
Sbjct: 1010 EQEAAFLVPPHGMRKIVLATNIAETGITIPDVTCVIDTGKHREMRFDERRQMSRLIDTFI 1069
Query: 682 SKXXXXXXXXXXXXVQPGECYHLYPRYVYDAF-ADYQLPELLRTPLQSLCLQIKSLQLGS 740
S+ VQ G C+H++ +Y +DA AD Q PE+LR LQ L +++K ++G
Sbjct: 1070 SRANAKQRRGRAGRVQQGLCFHMFTKYRHDAIMADQQTPEMLRLSLQDLAIRVKICKIGG 1129
Query: 741 ISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGA 800
I E LS+AL PP +++ AI+ L + AL + E+LT LG L+ LP++ LGK+++LG+
Sbjct: 1130 IEETLSKALDPPSAKNIRRAIDALIDVRALTQGEDLTPLGNQLARLPLDVFLGKLILLGS 1189
Query: 801 IFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAE 860
IF CLD +TV A LS + PF+ PF ++ A++ + F D SD L + AY WK
Sbjct: 1190 IFKCLDMAITVAAILSSKSPFVAPFGQRSQADTVRLGFRRGD-SDILTVYNAYLSWKRVC 1248
Query: 861 RHQSG-----YEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNK 908
+G +++C KNFLS QTL I+ L+ Q L L D+ + TE+ K
Sbjct: 1249 LAATGNSSQEFQFCRKNFLSQQTLANIEDLKGQLLVSLVDSKFLSM-TEDERK 1300
Score = 37 (18.1 bits), Expect = 2.1e-107, Sum P(2) = 2.1e-107
Identities = 18/74 (24%), Positives = 29/74 (39%)
Query: 79 TRTRRLDWKAVSYPLLEQQTSNYGRYAYQDESSDDSDREFGSTQQQMCGSTLDNIDE--- 135
TRT+ A+ PLL+ + ++ S + E Q ++ LD + E
Sbjct: 313 TRTKLY---ALQRPLLDAPKGKQKKLVVENGQSSSDELEIAKLQAKIAKIELDVLFEKDV 369
Query: 136 ----WRWKLTMLLR 145
WR K +L R
Sbjct: 370 ATAQWREKKIILER 383
>MGI|MGI:108177 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001085 "RNA polymerase II transcription factor
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005813 "centrosome" evidence=ISO]
[GO:0007623 "circadian rhythm" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0034605 "cellular response to heat"
evidence=IDA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=ISO] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISO] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 MGI:MGI:108177 GO:GO:0005524
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 GO:GO:0007623
Gene3D:3.30.160.20 GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063 CTD:1660
HOVERGEN:HBG039429 KO:K13184 OrthoDB:EOG4HHP1J GO:GO:0070937
EMBL:U91922 EMBL:AF023530 EMBL:AY512925 EMBL:BC089159 EMBL:AK013423
EMBL:U92080 IPI:IPI00339468 IPI:IPI00607914 IPI:IPI00875791
RefSeq:NP_031868.2 UniGene:Mm.20000 PDB:1UIL PDB:1WHQ PDB:2RS6
PDB:2RS7 PDBsum:1UIL PDBsum:1WHQ PDBsum:2RS6 PDBsum:2RS7
ProteinModelPortal:O70133 SMR:O70133 IntAct:O70133 STRING:O70133
PhosphoSite:O70133 PaxDb:O70133 PRIDE:O70133 GeneID:13211
KEGG:mmu:13211 UCSC:uc007czy.1 InParanoid:O70133 ChiTaRS:DHX9
EvolutionaryTrace:O70133 NextBio:283382 CleanEx:MM_DHX9
Genevestigator:O70133 GermOnline:ENSMUSG00000042699 Uniprot:O70133
Length = 1380
Score = 662 (238.1 bits), Expect = 2.4e-107, Sum P(2) = 2.4e-107
Identities = 166/464 (35%), Positives = 249/464 (53%)
Query: 542 EYSVQTQQSLSCWNPDSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQLQAHP 601
EY +T+ S+S N F LIE +L +I PGAVLVF+ GW+ I +++ L+ +
Sbjct: 617 EYGPETKLSMSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLENNS 676
Query: 602 LLGDPSRVLLLACHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGK 661
G R +L H + EQR +FD DGV K++L+TN+AETSITINDVV+VID K
Sbjct: 677 HFGS-HRYQILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAETSITINDVVYVIDSCK 735
Query: 662 AKETSYDALNNTPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPEL 721
K + A NN W SK V+PG C+HL R +D + PE+
Sbjct: 736 QKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFDRLETHMTPEM 795
Query: 722 LRTPLQSLCLQIKSLQLGSISEFLSRALQPPEPL-SVKNAIEYLQIIGALDENENLTVLG 780
RTPL + L IK L+LG I +FL++A++PP PL ++ A L+ + ALD N+ LT LG
Sbjct: 796 FRTPLHEIALSIKLLRLGGIGQFLAKAIEPP-PLDAIIEAEHTLRELDALDANDELTPLG 854
Query: 781 RNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSA 840
R L+ LP+EP+ GKM+I+G IF D V T+ A +PF+ + K L + F+
Sbjct: 855 RILAKLPIEPRFGKMMIMGCIFYVGDAVCTISAATCFPEPFIS--EGKRLGYIHR-NFAG 911
Query: 841 RDYSDHLALVRAYDGWKDAER--HQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGL 898
+SDH+AL+ + W DA ++ +C + L+ TL+ + Q +L ++G
Sbjct: 912 NRFSDHVALLSVFQAWDDARMSGEEAEIRFCEQKRLNMATLRMTWEAKVQLKEILINSGF 971
Query: 899 VDRN--TENCNKWSHDEHL--IRAVICAGLFPGLCSVVNKEKSIALKTMEDGQVLLYSNS 954
+ T+ D +L + +++ G++P +C +KEK L T E L++ +S
Sbjct: 972 PEDCLLTQVFTNTGPDNNLDVVISLLAFGVYPNVC--YHKEKRKILTT-EGRNALIHKSS 1028
Query: 955 VNAGVP----KIPYPWLVFNEKIKVNSVFLRDSTGVSDSVLLLF 994
VN K P P+ VF EKI+ ++ + T V+ LLLF
Sbjct: 1029 VNCPFSSQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPLQLLLF 1072
Score = 472 (171.2 bits), Expect = 2.4e-107, Sum P(2) = 2.4e-107
Identities = 97/208 (46%), Positives = 132/208 (63%)
Query: 288 QKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAAC 347
Q +L+ R LP K +L+AIS N VV++ G TGCGKTTQ+PQYIL+ + R A C
Sbjct: 381 QSVLQERELLPVKKFEAEILEAISSNSVVIIRGATGCGKTTQVPQYILDDFIQNDRAAEC 440
Query: 348 SIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRD-TRLMFCTTGIXXXXX 406
+I+ TQPRRISA+AV+ERVA ERGE+ G+S GY VR E + R +MFCT G+
Sbjct: 441 NIVVTQPRRISAVAVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL 500
Query: 407 XXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFG 466
G++HVIVDEIHER +N DFLL+V MSAT++ +F YF
Sbjct: 501 EAGIR--GISHVIVDEIHERDINTDFLLVVLRDVVLAYPEVRIVLMSATIDTTMFCEYFF 558
Query: 467 GAPMLHIPGFTYPVRAYFLENILEMTRY 494
P++ + G T+PV+ YFLE+ ++MT++
Sbjct: 559 NCPIIEVYGRTFPVQEYFLEDCIQMTQF 586
Score = 37 (18.1 bits), Expect = 1.8e-61, Sum P(2) = 1.8e-61
Identities = 13/68 (19%), Positives = 23/68 (33%)
Query: 324 CGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVR 383
CGK P Y + + R + + + M S + + V Y VR
Sbjct: 12 CGKRKMTPAYEIRAVGNKNRQKFMCEVRVEGFNYAGMGNSTNKKDAQSNAARDFVNYLVR 71
Query: 384 LEGMKGRD 391
+ +K +
Sbjct: 72 INEVKSEE 79
>UNIPROTKB|F1P1F4 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0042645
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00593383 OMA:LHKEERY EMBL:AADN02000053
Ensembl:ENSGALT00000008045 Uniprot:F1P1F4
Length = 1231
Score = 651 (234.2 bits), Expect = 3.0e-107, Sum P(2) = 3.0e-107
Identities = 148/384 (38%), Positives = 215/384 (55%)
Query: 559 IGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQLQAHPLLGDP-SRVLLLACHGS 617
+ +LI ++ I PG +L F+ GW +I ++ +L +LG SR L+L H +
Sbjct: 693 LDLDLITDLVLQIDAHGEPGGILCFLPGWQEIKGVQQRLLE--MLGSQNSRYLVLPVHSN 750
Query: 618 MASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLL 677
+ +Q+ IF +P GVRKIVLATN+AETSITIND+V V+D G KE YD CL
Sbjct: 751 IPMMDQQNIFQRPPPGVRKIVLATNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLE 810
Query: 678 PSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIK-SL 736
W+SK Q G YHL+PR D YQ+PE+LRTPL++L +Q K +
Sbjct: 811 TVWVSKSNVVQRRGRAGRCQSGFAYHLFPRSRLDKMPTYQVPEILRTPLENLVVQAKIHM 870
Query: 737 QLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKML 796
+ EFLS+AL P+ +V A+ LQ IG LD+ E LT LG+ L+ + +P+L K +
Sbjct: 871 PEKTAVEFLSKALDSPDIKAVDEAVILLQEIGVLDQREALTTLGKRLAQISTDPRLAKAI 930
Query: 797 ILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGW 856
+L +I+ CL P++ +V+ L+ RDPF + + AKA S SDHLA VRA GW
Sbjct: 931 VLASIYRCLHPLLVIVSCLT-RDPFSSSLQNRAEVDKAKAVLSRESGSDHLAFVRAVAGW 989
Query: 857 KDAERHQSGY---EYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTEN------CN 907
++ R + Y +L +L+ I+ L KQF L +A LV ++ CN
Sbjct: 990 EEVLRRRDSRARDNYLQDYYLYGPSLRFINGLVKQFSENLYEAFLVSSPSDCTMPSSVCN 1049
Query: 908 KWSHDEHLIRAVICAGLFPGLCSV 931
++S +E L++ V+ AGL+P L V
Sbjct: 1050 QYSEEEELVKGVLMAGLYPNLIQV 1073
Score = 482 (174.7 bits), Expect = 3.0e-107, Sum P(2) = 3.0e-107
Identities = 129/378 (34%), Positives = 196/378 (51%)
Query: 137 RWKLTMLLRNKDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNYRS 196
RW M K ++V + K ++L +L GL + + + + + R
Sbjct: 330 RWPCPMTFAAKGRRKVEAENKAAALACQKLKSL----GLVDKNN-NPLSHAMYNMTSLRE 384
Query: 197 DLDEKRPQREVILPFGLLREVDAHLKAYL-----SQKYINASMSSLSNVGSTTNDEGLYE 251
+ +R + +P LR+++ +L Y S+ I M +LS +D +
Sbjct: 385 LGENQRKPCHIKVPEATLRKIENYLNHYPVDIRESRPRIADDMMNLSKESGAISDAITGK 444
Query: 252 QQEQLVQNSVVRERILRQRSLQMHEKQ-QAWQESPEGQKMLEFRRSLPSYKERDALLKAI 310
+++ VR L Q L + +++ +WQES LP +D +L AI
Sbjct: 445 TYIPMLEAEEVR---LSQNLLALWKRRGSSWQES----------HPLPVDPHKDTILSAI 491
Query: 311 SENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAER 370
+N VVV++G+TGCGKTT++PQ +LE RGA C+++ TQPRRISA++V++RVA E
Sbjct: 492 EQNPVVVIAGDTGCGKTTRIPQLLLEHYILEGRGARCNVVITQPRRISAISVAQRVAQEL 551
Query: 371 GEKLGESVGYKVRLEGMK-GRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMN 429
G + ++VGY+VRLE R L+FCT GI GV+HV+VDE+HER +N
Sbjct: 552 GPNMRKNVGYQVRLESKPPARGGALLFCTVGILLRKLQGNPSLEGVSHVVVDEVHERDVN 611
Query: 430 EDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYFLENIL 489
DFLLI+ MSAT + + FS YFG P++ +PGF YPV+ Y+LE IL
Sbjct: 612 TDFLLILLKGIQKLNPDLRLVLMSATGDNQRFSHYFGDCPVVKVPGFMYPVKEYYLEEIL 671
Query: 490 -EMTRYRLNTYN--QIDD 504
++ R+R Y Q DD
Sbjct: 672 AKLGRHRHRHYEIKQSDD 689
Score = 288 (106.4 bits), Expect = 3.9e-67, Sum P(2) = 3.9e-67
Identities = 83/269 (30%), Positives = 139/269 (51%)
Query: 743 EFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIF 802
EFLS+AL P+ +V A+ LQ IG LD+ E LT LG+ L+ + +P+L K ++L +I+
Sbjct: 877 EFLSKALDSPDIKAVDEAVILLQEIGVLDQREALTTLGKRLAQISTDPRLAKAIVLASIY 936
Query: 803 NCLDPVMTVVAGLSVR--DPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAE 860
CL P++ +V+ L+ L + D A++ ++ S D+ + V ++
Sbjct: 937 RCLHPLLVIVSCLTRDPFSSSLQNRAEVDKAKAVLSRESGSDHLAFVRAVAGWEEVLRRR 996
Query: 861 RHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTEN------CNKWSHDEH 914
++ Y +L +L+ I+ L KQF L +A LV ++ CN++S +E
Sbjct: 997 DSRARDNYLQDYYLYGPSLRFINGLVKQFSENLYEAFLVSSPSDCTMPSSVCNQYSEEEE 1056
Query: 915 LIRAVICAGLFPGLCSVVN---------KEKSIALKTMEDGQVLLYSNSVNAGVPKIPYP 965
L++ V+ AGL+P L V K S A +T + G VLL+ +++N K+
Sbjct: 1057 LVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSYAYRT-KAGTVLLHKSTINREASKLYSR 1115
Query: 966 WLVFNEKIKVNS-VFLRDSTGVSDSVLLL 993
WL + +K N VF+RDS+ V +LL
Sbjct: 1116 WLTYFMAVKSNGGVFVRDSSQVHPLAVLL 1144
>UNIPROTKB|G5E5N3 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9913
"Bos taurus" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 Gene3D:3.30.160.20 GO:GO:0030529
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 UniGene:Bt.5544 GO:GO:0070937
OMA:DDWIRLQ GO:GO:0070934 EMBL:DAAA02043563 EMBL:DAAA02043564
Ensembl:ENSBTAT00000026409 Uniprot:G5E5N3
Length = 1287
Score = 662 (238.1 bits), Expect = 5.4e-107, Sum P(2) = 5.4e-107
Identities = 165/464 (35%), Positives = 248/464 (53%)
Query: 542 EYSVQTQQSLSCWNPDSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQLQAHP 601
EY +T+ S++ N F LIE +L +I PGAVLVF+ GW+ I +++ L+ +P
Sbjct: 612 EYGAETRISMAQLNEKETPFELIEALLLYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNP 671
Query: 602 LLGDPSRVLLLACHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGK 661
G R +L H + EQR +FD GV KI+L+TN+AETSITINDVV+VID K
Sbjct: 672 HFGS-HRYQILPLHSQIPREEQRKVFDPVPSGVTKIILSTNIAETSITINDVVYVIDSCK 730
Query: 662 AKETSYDALNNTPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPEL 721
K + A NN W SK V+PG C+HL R ++ + PE+
Sbjct: 731 QKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEM 790
Query: 722 LRTPLQSLCLQIKSLQLGSISEFLSRALQPPEPL-SVKNAIEYLQIIGALDENENLTVLG 780
RTPL + L IK L+LG I +FL++A++PP PL +V A L+ + ALD N+ LT LG
Sbjct: 791 FRTPLHEIALSIKLLRLGGIGQFLAKAIEPP-PLDAVIEAEHTLRELDALDANDELTPLG 849
Query: 781 RNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSA 840
R L+ LP+EP+ GKM+I+G IF D + T+ A +PF+ + K L + F+
Sbjct: 850 RILAKLPIEPRFGKMMIMGCIFYVGDAICTISAATCFPEPFIS--EGKRLGYIHR-NFAG 906
Query: 841 RDYSDHLALVRAYDGWKDAER--HQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGL 898
+SDH+AL+ + W DA ++ +C L+ TL+ + Q +L ++G
Sbjct: 907 NRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGF 966
Query: 899 VDRN--TENCNKWSHDEHL--IRAVICAGLFPGLCSVVNKEKSIALKTMEDGQVLLYSNS 954
+ T+ D +L + +++ G++P +C +KEK L T E L++ +S
Sbjct: 967 PEECLLTQVFTNTGPDNNLDVVISLLAFGVYPNVC--YHKEKRKILTT-EGRNALIHKSS 1023
Query: 955 VNAGVP----KIPYPWLVFNEKIKVNSVFLRDSTGVSDSVLLLF 994
VN K P P+ VF EKI+ ++ + T V+ LLLF
Sbjct: 1024 VNCPFSSQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPLQLLLF 1067
Score = 467 (169.5 bits), Expect = 5.4e-107, Sum P(2) = 5.4e-107
Identities = 98/228 (42%), Positives = 141/228 (61%)
Query: 269 QRSLQM-HEKQQAWQESPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKT 327
Q S+ + +E ++ + Q +L+ R LP K +L+AIS+N VV++ G TGCGKT
Sbjct: 356 QISMDLKNELMYQLEQDRDLQAVLQERELLPVKKFESEILEAISQNPVVIIRGATGCGKT 415
Query: 328 TQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGM 387
TQ+PQ+IL+ + R A C+I+ TQPRRISA++V+ERVA ERGE+ G+S GY VR E +
Sbjct: 416 TQVPQFILDDCIQNDRAAECNIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESI 475
Query: 388 KGRD-TRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXX 446
R +MFCT G+ G++HVIVDEIHER +N DFLL+V
Sbjct: 476 LPRPHASIMFCTVGVLLRKLEAGIR--GISHVIVDEIHERDINTDFLLVVLRDVVQAYPE 533
Query: 447 XXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYFLENILEMTRY 494
MSAT++ +F YF P++ + G T+PV+ YFLE+ ++MT +
Sbjct: 534 VRIVLMSATIDTSMFCEYFFNCPIIEVYGRTFPVQEYFLEDCIQMTHF 581
Score = 40 (19.1 bits), Expect = 5.8e-62, Sum P(2) = 5.8e-62
Identities = 13/68 (19%), Positives = 23/68 (33%)
Query: 324 CGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVR 383
CGK P Y + + R + + + M S + + V Y VR
Sbjct: 12 CGKRKMTPSYEIRAVGNKNRQKFMCEVRVEGYNYTGMGNSTNKKDAQSNAARDFVNYLVR 71
Query: 384 LEGMKGRD 391
+ +K +
Sbjct: 72 INELKSEE 79
>UNIPROTKB|Q28141 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9913
"Bos taurus" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISS] [GO:0030529 "ribonucleoprotein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247063 EMBL:X82829 IPI:IPI00714708
PIR:I46032 RefSeq:NP_776461.1 UniGene:Bt.5544
ProteinModelPortal:Q28141 SMR:Q28141 STRING:Q28141 PRIDE:Q28141
GeneID:281115 KEGG:bta:281115 CTD:1660 HOVERGEN:HBG039429
InParanoid:Q28141 KO:K13184 OrthoDB:EOG4HHP1J NextBio:20805185
GO:GO:0070937 Uniprot:Q28141
Length = 1287
Score = 662 (238.1 bits), Expect = 5.4e-107, Sum P(2) = 5.4e-107
Identities = 165/464 (35%), Positives = 248/464 (53%)
Query: 542 EYSVQTQQSLSCWNPDSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQLQAHP 601
EY +T+ S++ N F LIE +L +I PGAVLVF+ GW+ I +++ L+ +P
Sbjct: 612 EYGAETRISMAQLNEKETPFELIEALLLYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNP 671
Query: 602 LLGDPSRVLLLACHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGK 661
G R +L H + EQR +FD GV KI+L+TN+AETSITINDVV+VID K
Sbjct: 672 HFGS-HRYQILPLHSQIPREEQRKVFDPVPSGVTKIILSTNIAETSITINDVVYVIDSCK 730
Query: 662 AKETSYDALNNTPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPEL 721
K + A NN W SK V+PG C+HL R ++ + PE+
Sbjct: 731 QKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEM 790
Query: 722 LRTPLQSLCLQIKSLQLGSISEFLSRALQPPEPL-SVKNAIEYLQIIGALDENENLTVLG 780
RTPL + L IK L+LG I +FL++A++PP PL +V A L+ + ALD N+ LT LG
Sbjct: 791 FRTPLHEIALSIKLLRLGGIGQFLAKAIEPP-PLDAVIEAEHTLRELDALDANDELTPLG 849
Query: 781 RNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSA 840
R L+ LP+EP+ GKM+I+G IF D + T+ A +PF+ + K L + F+
Sbjct: 850 RILAKLPIEPRFGKMMIMGCIFYVGDAICTISAATCFPEPFIS--EGKRLGYIHR-NFAG 906
Query: 841 RDYSDHLALVRAYDGWKDAER--HQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGL 898
+SDH+AL+ + W DA ++ +C L+ TL+ + Q +L ++G
Sbjct: 907 NRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGF 966
Query: 899 VDRN--TENCNKWSHDEHL--IRAVICAGLFPGLCSVVNKEKSIALKTMEDGQVLLYSNS 954
+ T+ D +L + +++ G++P +C +KEK L T E L++ +S
Sbjct: 967 PEECLLTQVFTNTGPDNNLDVVISLLAFGVYPNVC--YHKEKRKILTT-EGRNALIHKSS 1023
Query: 955 VNAGVP----KIPYPWLVFNEKIKVNSVFLRDSTGVSDSVLLLF 994
VN K P P+ VF EKI+ ++ + T V+ LLLF
Sbjct: 1024 VNCPFSSQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPLQLLLF 1067
Score = 467 (169.5 bits), Expect = 5.4e-107, Sum P(2) = 5.4e-107
Identities = 98/228 (42%), Positives = 141/228 (61%)
Query: 269 QRSLQM-HEKQQAWQESPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKT 327
Q S+ + +E ++ + Q +L+ R LP K +L+AIS+N VV++ G TGCGKT
Sbjct: 356 QISMDLKNELMYQLEQDRDLQAVLQERELLPVKKFESEILEAISQNPVVIIRGATGCGKT 415
Query: 328 TQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGM 387
TQ+PQ+IL+ + R A C+I+ TQPRRISA++V+ERVA ERGE+ G+S GY VR E +
Sbjct: 416 TQVPQFILDDCIQNDRAAECNIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESI 475
Query: 388 KGRD-TRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXX 446
R +MFCT G+ G++HVIVDEIHER +N DFLL+V
Sbjct: 476 LPRPHASIMFCTVGVLLRKLEAGIR--GISHVIVDEIHERDINTDFLLVVLRDVVQAYPE 533
Query: 447 XXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYFLENILEMTRY 494
MSAT++ +F YF P++ + G T+PV+ YFLE+ ++MT +
Sbjct: 534 VRIVLMSATIDTSMFCEYFFNCPIIEVYGRTFPVQEYFLEDCIQMTHF 581
Score = 40 (19.1 bits), Expect = 5.8e-62, Sum P(2) = 5.8e-62
Identities = 13/68 (19%), Positives = 23/68 (33%)
Query: 324 CGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVR 383
CGK P Y + + R + + + M S + + V Y VR
Sbjct: 12 CGKRKMTPSYEIRAVGNKNRQKFMCEVRVEGYNYTGMGNSTNKKDAQSNAARDFVNYLVR 71
Query: 384 LEGMKGRD 391
+ +K +
Sbjct: 72 INELKSEE 79
>UNIPROTKB|Q5R874 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9601
"Pongo abelii" [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISS] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 HOVERGEN:HBG039429 KO:K13184
OrthoDB:EOG4HHP1J GO:GO:0070937 OMA:DDWIRLQ GO:GO:0070934
EMBL:CR859880 RefSeq:XP_002809755.1 UniGene:Pab.8432
ProteinModelPortal:Q5R874 SMR:Q5R874 PRIDE:Q5R874
Ensembl:ENSPPYT00000000510 GeneID:100449914 KEGG:pon:100449914
InParanoid:Q5R874 Uniprot:Q5R874
Length = 1269
Score = 657 (236.3 bits), Expect = 5.4e-107, Sum P(2) = 5.4e-107
Identities = 165/464 (35%), Positives = 248/464 (53%)
Query: 542 EYSVQTQQSLSCWNPDSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQLQAHP 601
EY +T+ S+S N F LIE +L +I PGAVLVF+ GW+ I +++ L+ +P
Sbjct: 615 EYGPETRLSMSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNP 674
Query: 602 LLGDPSRVLLLACHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGK 661
G R +L H + EQR +FD GV K++L+TN+AETSITINDVV+VID K
Sbjct: 675 HFGS-HRYQILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCK 733
Query: 662 AKETSYDALNNTPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPEL 721
K + A NN W SK V+PG C+HL R ++ + PE+
Sbjct: 734 QKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEM 793
Query: 722 LRTPLQSLCLQIKSLQLGSISEFLSRALQPPEPL-SVKNAIEYLQIIGALDENENLTVLG 780
RTPL + L IK L+LG I +FL++A++PP PL +V A L+ + ALD N+ LT LG
Sbjct: 794 FRTPLHEIALSIKLLRLGGIGQFLAKAIEPP-PLDAVIEAEHTLRELDALDANDELTPLG 852
Query: 781 RNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSA 840
R L+ LP+EP+ GKM+I+G IF D + T+ A +PF+ + K L + F+
Sbjct: 853 RILAKLPIEPRFGKMMIMGCIFYVGDAICTIAAATCFPEPFIN--EGKRLGYIHR-NFAG 909
Query: 841 RDYSDHLALVRAYDGWKDAER--HQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGL 898
+SDH+AL+ + W DA ++ +C L+ TL+ + Q +L ++G
Sbjct: 910 NRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGF 969
Query: 899 VDRN--TENCNKWSHDEHL--IRAVICAGLFPGLCSVVNKEKSIALKTMEDGQVLLYSNS 954
+ T+ D +L + +++ G++P +C +KEK L T E L++ +S
Sbjct: 970 PEDCLLTQVFTNTGPDNNLDVVISLLAFGVYPNVC--YHKEKRKILTT-EGRNALIHKSS 1026
Query: 955 VNAGVP----KIPYPWLVFNEKIKVNSVFLRDSTGVSDSVLLLF 994
VN K P P+ VF EKI+ ++ + T V+ LLLF
Sbjct: 1027 VNCPFSSQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPLQLLLF 1070
Score = 473 (171.6 bits), Expect = 5.4e-107, Sum P(2) = 5.4e-107
Identities = 99/228 (43%), Positives = 141/228 (61%)
Query: 269 QRSLQM-HEKQQAWQESPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKT 327
Q S+ + +E ++ + Q +L+ R LP K +L+AIS+N VV++ G TGCGKT
Sbjct: 359 QISMDLKNELMYQLEQDHDLQAILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKT 418
Query: 328 TQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGM 387
TQ+PQ+IL+ + R A C+I+ TQPRRISA++V+ERVA ERGE+ G+S GY VR E +
Sbjct: 419 TQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESI 478
Query: 388 KGRD-TRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXX 446
R +MFCT G+ G++HVIVDEIHER +N DFLL+V
Sbjct: 479 LPRPHASIMFCTVGVLLRKLEAGIR--GISHVIVDEIHERDINTDFLLVVLRDVVQAYPE 536
Query: 447 XXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYFLENILEMTRY 494
MSAT++ +F YF P++ + G TYPV+ YFLE+ ++MT +
Sbjct: 537 VRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQMTHF 584
Score = 39 (18.8 bits), Expect = 3.2e-61, Sum P(2) = 3.2e-61
Identities = 13/68 (19%), Positives = 23/68 (33%)
Query: 324 CGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVR 383
CGK P Y + + R + + + M S + + V Y VR
Sbjct: 12 CGKRKMTPSYEIRAVGNKNRQKFMCEVQVEGYNYTGMGNSTNKKDAQSNAARDFVNYLVR 71
Query: 384 LEGMKGRD 391
+ +K +
Sbjct: 72 INEIKSEE 79
>UNIPROTKB|Q08211 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9606
"Homo sapiens" [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0070937 "CRD-mediated mRNA stability
complex" evidence=IDA] [GO:0070934 "CRD-mediated mRNA
stabilization" evidence=IMP] [GO:0030529 "ribonucleoprotein
complex" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=TAS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=TAS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0001085 "RNA polymerase II transcription factor binding"
evidence=IPI] Reactome:REACT_71 InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005813 GO:GO:0005654 GO:GO:0034605
GO:GO:0005730 GO:GO:0003677 Reactome:REACT_1675 Gene3D:3.30.160.20
EMBL:CH471067 GO:GO:0030529 GO:GO:0003725 GO:GO:0004003
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000247063 CTD:1660 HOVERGEN:HBG039429 KO:K13184
OrthoDB:EOG4HHP1J GO:GO:0070937 OMA:DDWIRLQ EMBL:L13848 EMBL:U03643
EMBL:Y10658 EMBL:AB451248 EMBL:AB451372 EMBL:AL355999 EMBL:AL662837
EMBL:BC025245 EMBL:BC058896 EMBL:BC107881 EMBL:BC137136
IPI:IPI00844578 RefSeq:NP_001348.2 UniGene:Hs.191518 PDB:3LLM
PDBsum:3LLM ProteinModelPortal:Q08211 SMR:Q08211 DIP:DIP-31504N
IntAct:Q08211 MINT:MINT-5000572 STRING:Q08211 PhosphoSite:Q08211
DMDM:116241330 SWISS-2DPAGE:Q08211 PaxDb:Q08211 PRIDE:Q08211
Ensembl:ENST00000367549 GeneID:1660 KEGG:hsa:1660 UCSC:uc001gpr.3
GeneCards:GC01P182808 H-InvDB:HIX0001404 H-InvDB:HIX0149309
HGNC:HGNC:2750 HPA:CAB011819 HPA:HPA028050 MIM:603115
neXtProt:NX_Q08211 PharmGKB:PA27232 InParanoid:Q08211
GenomeRNAi:1660 NextBio:6832 PMAP-CutDB:Q08211 ArrayExpress:Q08211
Bgee:Q08211 CleanEx:HS_DHX9 Genevestigator:Q08211
GermOnline:ENSG00000135829 GO:GO:0070934 Uniprot:Q08211
Length = 1270
Score = 657 (236.3 bits), Expect = 5.4e-107, Sum P(2) = 5.4e-107
Identities = 165/464 (35%), Positives = 248/464 (53%)
Query: 542 EYSVQTQQSLSCWNPDSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQLQAHP 601
EY +T+ S+S N F LIE +L +I PGAVLVF+ GW+ I +++ L+ +P
Sbjct: 615 EYGPETRLSMSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNP 674
Query: 602 LLGDPSRVLLLACHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGK 661
G R +L H + EQR +FD GV K++L+TN+AETSITINDVV+VID K
Sbjct: 675 HFGS-HRYQILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCK 733
Query: 662 AKETSYDALNNTPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPEL 721
K + A NN W SK V+PG C+HL R ++ + PE+
Sbjct: 734 QKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEM 793
Query: 722 LRTPLQSLCLQIKSLQLGSISEFLSRALQPPEPL-SVKNAIEYLQIIGALDENENLTVLG 780
RTPL + L IK L+LG I +FL++A++PP PL +V A L+ + ALD N+ LT LG
Sbjct: 794 FRTPLHEIALSIKLLRLGGIGQFLAKAIEPP-PLDAVIEAEHTLRELDALDANDELTPLG 852
Query: 781 RNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSA 840
R L+ LP+EP+ GKM+I+G IF D + T+ A +PF+ + K L + F+
Sbjct: 853 RILAKLPIEPRFGKMMIMGCIFYVGDAICTIAAATCFPEPFIN--EGKRLGYIHR-NFAG 909
Query: 841 RDYSDHLALVRAYDGWKDAER--HQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGL 898
+SDH+AL+ + W DA ++ +C L+ TL+ + Q +L ++G
Sbjct: 910 NRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGF 969
Query: 899 VDRN--TENCNKWSHDEHL--IRAVICAGLFPGLCSVVNKEKSIALKTMEDGQVLLYSNS 954
+ T+ D +L + +++ G++P +C +KEK L T E L++ +S
Sbjct: 970 PEDCLLTQVFTNTGPDNNLDVVISLLAFGVYPNVC--YHKEKRKILTT-EGRNALIHKSS 1026
Query: 955 VNAGVP----KIPYPWLVFNEKIKVNSVFLRDSTGVSDSVLLLF 994
VN K P P+ VF EKI+ ++ + T V+ LLLF
Sbjct: 1027 VNCPFSSQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPLQLLLF 1070
Score = 473 (171.6 bits), Expect = 5.4e-107, Sum P(2) = 5.4e-107
Identities = 99/228 (43%), Positives = 141/228 (61%)
Query: 269 QRSLQM-HEKQQAWQESPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKT 327
Q S+ + +E ++ + Q +L+ R LP K +L+AIS+N VV++ G TGCGKT
Sbjct: 359 QISMDLKNELMYQLEQDHDLQAILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKT 418
Query: 328 TQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGM 387
TQ+PQ+IL+ + R A C+I+ TQPRRISA++V+ERVA ERGE+ G+S GY VR E +
Sbjct: 419 TQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESI 478
Query: 388 KGRD-TRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXX 446
R +MFCT G+ G++HVIVDEIHER +N DFLL+V
Sbjct: 479 LPRPHASIMFCTVGVLLRKLEAGIR--GISHVIVDEIHERDINTDFLLVVLRDVVQAYPE 536
Query: 447 XXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYFLENILEMTRY 494
MSAT++ +F YF P++ + G TYPV+ YFLE+ ++MT +
Sbjct: 537 VRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQMTHF 584
Score = 39 (18.8 bits), Expect = 3.2e-61, Sum P(2) = 3.2e-61
Identities = 13/68 (19%), Positives = 23/68 (33%)
Query: 324 CGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVR 383
CGK P Y + + R + + + M S + + V Y VR
Sbjct: 12 CGKRKMTPSYEIRAVGNKNRQKFMCEVQVEGYNYTGMGNSTNKKDAQSNAARDFVNYLVR 71
Query: 384 LEGMKGRD 391
+ +K +
Sbjct: 72 INEIKSEE 79
>UNIPROTKB|F1SLN0 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000018413 Uniprot:F1SLN0
Length = 1367
Score = 1038 (370.5 bits), Expect = 9.2e-107, Sum P(2) = 9.2e-107
Identities = 251/685 (36%), Positives = 379/685 (55%)
Query: 347 CSIICTQPRRISAMAVSERVAAERGEKLGES-----VGYKVRLEGMKGRDTRLMFCTTGI 401
C+I+CTQPRRISA++++ RV E G + G GY++R+E TRL++CTTG+
Sbjct: 620 CNIVCTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRLLYCTTGV 679
Query: 402 XXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELF 461
V+HVIVDE+HER + DFLLI+ MSAT+++E F
Sbjct: 680 LLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKF 739
Query: 462 SSYFGGAPMLHIPGFTYPVRAYFLENILEMTRYRL---NTYNQ-IDDYGQEKSWKMQKQA 517
S+YF P+L I G +YPV + LE+I+E T + L + Y Q + +E + + +A
Sbjct: 740 STYFTHCPILRISGRSYPVEVFHLEDIIEETGFVLEKDSEYCQKFLEEEEEITINVTSKA 799
Query: 518 LALRKRKSSIASAVEDALEAADF-REYSVQTQQSLSCWNPDSIGFNLIEHVLCHIVKKER 576
++K + I + + F ++YS +TQ ++ NP I +LI +L ++ +R
Sbjct: 800 GGIKKYQEYIPVQTGTSADLNPFYQKYSNRTQHAILYMNPHKINLDLILELLTYLEITDR 859
Query: 577 -P------GAVLVFMTGWDDINSLKDQLQAHPLLGDPSRVLLLACHGSMASSEQRLIFDK 629
P GAVL+F+ G I L D L R ++A H +++ +Q F
Sbjct: 860 SPQFKNVEGAVLIFLPGLAHIQQLYDLLSTDRRFFS-ERYKVIALHSILSTQDQAAAFTL 918
Query: 630 PEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXX 689
P GVRKIVLATN+AET ITI DVVFVID G+ KE Y + L+ +++SK
Sbjct: 919 PPQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQR 978
Query: 690 XXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRAL 749
V+ G C+ +Y R ++ F DY +PE+LR PL+ LCL I LGS +FLS+AL
Sbjct: 979 QGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKAL 1038
Query: 750 QPPEPLSVKNAIEYLQIIGALDENE-NLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPV 808
PP+ + NA+ L+ IGA + NE LT LG++L+ LPV K+GKMLI GAIF CLDPV
Sbjct: 1039 DPPQLQVISNAMHLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPV 1098
Query: 809 MTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYE- 867
T+ A ++ + PF P +KD A+ AK+ + D SDHL + AY GWK A++ + GY
Sbjct: 1099 ATLAAVMTEKSPFTTPIGRKDEADLAKSALAMAD-SDHLTIYNAYLGWKKAQQ-EGGYRS 1156
Query: 868 ---YCWKNFLSAQTLKAIDSLRKQFLFLLK----DAGLVDRNTENCNKWSHDE-HLIRAV 919
YC +NFL+ +L ++ ++++ LLK ++ S E L++AV
Sbjct: 1157 EIAYCRRNFLNRTSLLTLEEIKRRRTTLLKLIFYSIKTYYSSSRASQTLSFQEIALLKAV 1216
Query: 920 ICAGLFPGLCSVV-NK-----EKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFNEKI 973
+ AGL+ + ++ K EK + G+ ++ +SVN + Y WL++ EKI
Sbjct: 1217 LTAGLYDNVGKIIYTKSVDVTEKLACIVETAQGKAQVHPSSVNRDLQT--YGWLLYQEKI 1274
Query: 974 KVNSVFLRDSTGVSDSVLLLFGGNI 998
+ V+LR++T ++ +LLFGG+I
Sbjct: 1275 RYARVYLRETTLITPFSVLLFGGDI 1299
Score = 467 (169.5 bits), Expect = 5.4e-39, Sum P(2) = 5.4e-39
Identities = 107/306 (34%), Positives = 176/306 (57%)
Query: 282 QESPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEA 341
Q +P+ Q++L+ R+ LP +K R+++++ + ++VVVV+GETG GK+TQ+P ++LE
Sbjct: 554 QSTPKYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLN 613
Query: 342 ARGAA-CSIICTQPRRISAMAVSERVAAERGEKLGES-----VGYKVRLEGMKGRDTRLM 395
G + C+I+CTQPRRISA++++ RV E G + G GY++R+E TRL+
Sbjct: 614 EWGTSKCNIVCTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRLL 673
Query: 396 FCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSAT 455
+CTTG+ V+HVIVDE+HER + DFLLI+ MSAT
Sbjct: 674 YCTTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSAT 733
Query: 456 LNAELFSSYFGGAPMLHIPGFTYPVRAYFLENILEMTRYRL---NTYNQ-IDDYGQEKSW 511
+++E FS+YF P+L I G +YPV + LE+I+E T + L + Y Q + +E +
Sbjct: 734 VDSEKFSTYFTHCPILRISGRSYPVEVFHLEDIIEETGFVLEKDSEYCQKFLEEEEEITI 793
Query: 512 KMQKQALALRKRKSSIASAVEDALEAADF-REYSVQTQQSLSCWNPDSIGFNLIEHVLCH 570
+ +A ++K + I + + F ++YS +TQ ++ NP I +LI +L +
Sbjct: 794 NVTSKAGGIKKYQEYIPVQTGTSADLNPFYQKYSNRTQHAILYMNPHKINLDLILELLTY 853
Query: 571 IVKKER 576
+ +R
Sbjct: 854 LEITDR 859
Score = 38 (18.4 bits), Expect = 9.2e-107, Sum P(2) = 9.2e-107
Identities = 15/51 (29%), Positives = 23/51 (45%)
Query: 140 LTMLLRNKDEQE---VVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFS 187
L +++ NK EQ+ V++ KK D +S T L Y + FS
Sbjct: 84 LKVVINNKLEQKIIGVINEHKKQNNDKGVISGRLTAKKLQDL-YMALQAFS 133
>UNIPROTKB|Q68FK8 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase A-like protein"
species:8355 "Xenopus laevis" [GO:0070937 "CRD-mediated mRNA
stability complex" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:1660
HOVERGEN:HBG039429 KO:K13184 GO:GO:0070937 EMBL:BC079701
RefSeq:NP_001087383.1 UniGene:Xl.55621 ProteinModelPortal:Q68FK8
SMR:Q68FK8 PRIDE:Q68FK8 GeneID:447207 KEGG:xla:447207
Xenbase:XB-GENE-967780 Uniprot:Q68FK8
Length = 1262
Score = 660 (237.4 bits), Expect = 1.5e-106, Sum P(2) = 1.5e-106
Identities = 166/464 (35%), Positives = 249/464 (53%)
Query: 542 EYSVQTQQSLSCWNPDSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQLQAHP 601
+Y +T++S+S + LIE +L +I PGAVLVF+ GW+ I +++ L+ +P
Sbjct: 617 DYGPETRRSMSQLSEKETPLELIEALLKYIETLNVPGAVLVFLPGWNLIYAMQKHLEMNP 676
Query: 602 LLGDPSRVLLLACHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGK 661
G S +L H + EQR +FD DG+ K++L+TN+AETSITINDVV+VID K
Sbjct: 677 HFGSHS-YCILPLHSQIPRDEQRKVFDPVPDGIIKVILSTNIAETSITINDVVYVIDSCK 735
Query: 662 AKETSYDALNNTPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPEL 721
K + + NN W SK V+PG C+HL + +D + PE+
Sbjct: 736 QKVKLFTSHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSKARFDKLETHLTPEI 795
Query: 722 LRTPLQSLCLQIKSLQLGSISEFLSRALQPPEPL-SVKNAIEYLQIIGALDENENLTVLG 780
RTPL + L IK L+LG I FLS+A++PP PL +V A L+ + ALD N+ LT LG
Sbjct: 796 FRTPLHEVALSIKLLRLGGIGHFLSKAIEPP-PLDAVIEAEHTLRELDALDSNDELTPLG 854
Query: 781 RNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSA 840
R L+ LP+EP+LGKM+I+G IF D + T+ A +PF+ + + L + F+
Sbjct: 855 RILAKLPIEPRLGKMMIIGCIFYVGDALCTISAATCFPEPFIS--EGRRLGYVHR-NFAG 911
Query: 841 RDYSDHLALVRAYDGWKDAERHQSGYE--YCWKNFLSAQTLKAIDSLRKQFLFLLKDAGL 898
+SDH+AL+ + W DA E +C L+ TL+ + Q +L +AG
Sbjct: 912 NRFSDHVALLSVFQAWDDARMGGEDAETRFCEHKRLNMATLRMTWEAKVQLKDILVNAGF 971
Query: 899 VDRNTEN--CNKWSHDEHL--IRAVICAGLFPGLCSVVNKEKSIALKTMEDGQVLLYSNS 954
+ N N D +L + +++ G++P +C +KEK L T E L++ +S
Sbjct: 972 PEECLMNQVFNNTGPDNNLDVVISLLAFGVYPNVC--YHKEKRKILTT-EGRNALIHKSS 1028
Query: 955 VNAGVP----KIPYPWLVFNEKIKVNSVFLRDSTGVSDSVLLLF 994
VN K P P+ VF+EKI+ ++ + T VS LLLF
Sbjct: 1029 VNCPFSNQDLKYPSPFFVFSEKIRTRAISAKGMTMVSPLQLLLF 1072
Score = 465 (168.7 bits), Expect = 1.5e-106, Sum P(2) = 1.5e-106
Identities = 94/227 (41%), Positives = 140/227 (61%)
Query: 269 QRSLQMHEKQQAWQESPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTT 328
Q SL++ + + P +++L R SLP K + ++ A+ + VV++ G TGCGKTT
Sbjct: 362 QISLELKNEHMYHIQDPNIKQVLIDRESLPVKKFEEEIMHAVHNSPVVIIRGATGCGKTT 421
Query: 329 QLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMK 388
Q+PQYIL+ R A C+I+ TQPRRISA++V+ERVA ERGE++G+S GY VR E +
Sbjct: 422 QVPQYILDEYIRNDRAAQCNIVVTQPRRISAVSVAERVAFERGEEIGKSCGYSVRFESVL 481
Query: 389 GRD-TRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXX 447
R ++FCT G+ G++HVIVDEIHER +N DFLL+V
Sbjct: 482 PRPHASMLFCTVGVLLRKLESGIR--GISHVIVDEIHERDINTDFLLVVLRDVIQAFPEI 539
Query: 448 XXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYFLENILEMTRY 494
MSAT++ +F YF P++ + G T+PV+ Y+LE+ ++MT++
Sbjct: 540 RVILMSATIDTSMFCEYFFNCPIIEVFGRTFPVQEYYLEDCIQMTQF 586
Score = 38 (18.4 bits), Expect = 1.6e-61, Sum P(2) = 1.6e-61
Identities = 12/54 (22%), Positives = 21/54 (38%)
Query: 107 QDESSDDSDREFGSTQQQMCGSTL--DNIDEWRWKLTMLLRNKDEQEVVSRAKK 158
+D+ D D E G ++ C D E R ++ L + E++ K
Sbjct: 591 RDKKKKDKDEEGGDDEETNCNLVCGDDYGPETRRSMSQLSEKETPLELIEALLK 644
>UNIPROTKB|E2RNT3 [details] [associations]
symbol:DHX9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 Gene3D:3.30.160.20 GO:GO:0030529
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 KO:K13184 GO:GO:0070937
OMA:DDWIRLQ GO:GO:0070934 EMBL:AAEX03005146 EMBL:AAEX03005147
RefSeq:XP_537154.2 Ensembl:ENSCAFT00000020976 GeneID:480032
KEGG:cfa:480032 NextBio:20855120 Uniprot:E2RNT3
Length = 1276
Score = 656 (236.0 bits), Expect = 2.5e-106, Sum P(2) = 2.5e-106
Identities = 165/464 (35%), Positives = 248/464 (53%)
Query: 542 EYSVQTQQSLSCWNPDSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQLQAHP 601
EY +T+ S++ N F LIE +L +I PGAVLVF+ GW+ I +++ L+ +P
Sbjct: 616 EYGPETKMSMAQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNP 675
Query: 602 LLGDPSRVLLLACHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGK 661
G R +L H + EQR +FD GV K++L+TN+AETSITINDVV+VID K
Sbjct: 676 DFGS-HRYQILPLHSQIPREEQRKVFDPVPAGVTKVILSTNIAETSITINDVVYVIDSCK 734
Query: 662 AKETSYDALNNTPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPEL 721
K + A NN W SK V+PG C+HL R ++ + PE+
Sbjct: 735 QKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEM 794
Query: 722 LRTPLQSLCLQIKSLQLGSISEFLSRALQPPEPL-SVKNAIEYLQIIGALDENENLTVLG 780
RTPL + L IK L+LG I +FL++A++PP PL +V A L+ + ALD N+ LT LG
Sbjct: 795 FRTPLHEIALSIKLLRLGGIGQFLAKAIEPP-PLDAVIEAEHTLRELDALDANDELTPLG 853
Query: 781 RNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSA 840
R L+ LP+EP+ GKM+I+G IF D V T+ A +PF+ + K L + F+
Sbjct: 854 RILAKLPIEPRFGKMMIMGCIFYVGDAVCTISAATCFPEPFIS--EGKRLGYIHR-NFAG 910
Query: 841 RDYSDHLALVRAYDGWKDAER--HQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGL 898
+SDH+AL+ + W DA ++ +C L+ TL+ + Q +L ++G
Sbjct: 911 NRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGF 970
Query: 899 VDRN--TENCNKWSHDEHL--IRAVICAGLFPGLCSVVNKEKSIALKTMEDGQVLLYSNS 954
+ T+ D +L + +++ G++P +C +KEK L T E L++ +S
Sbjct: 971 PEDCLLTQVFTNTGPDNNLDVVISLLAFGVYPNVC--YHKEKRKILTT-EGRNALIHKSS 1027
Query: 955 VNAGVP----KIPYPWLVFNEKIKVNSVFLRDSTGVSDSVLLLF 994
VN K P P+ VF EKI+ ++ + T V+ LLLF
Sbjct: 1028 VNCPFSSQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPLQLLLF 1071
Score = 468 (169.8 bits), Expect = 2.5e-106, Sum P(2) = 2.5e-106
Identities = 95/206 (46%), Positives = 131/206 (63%)
Query: 290 MLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSI 349
+L+ R LP K +L+AIS+N VV++ G TGCGKTTQ+PQ+IL+ + R A C+I
Sbjct: 382 ILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRAAECNI 441
Query: 350 ICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRD-TRLMFCTTGIXXXXXXX 408
+ TQPRRISA++V+ERVA ERGE+ G+S GY VR E + R +MFCT G+
Sbjct: 442 VVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESVLPRPYASIMFCTVGVLLRKLEA 501
Query: 409 XXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGA 468
G++HVIVDEIHER +N DFLL+V MSAT++ +F YF
Sbjct: 502 GIR--GISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNC 559
Query: 469 PMLHIPGFTYPVRAYFLENILEMTRY 494
P++ + G TYPV+ YFLE+ ++MT +
Sbjct: 560 PIIEVYGRTYPVQEYFLEDCIQMTHF 585
>ZFIN|ZDB-GENE-070912-171 [details] [associations]
symbol:dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide
9" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 ZFIN:ZDB-GENE-070912-171
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 HOVERGEN:HBG039429 OrthoDB:EOG4HHP1J
OMA:DDWIRLQ EMBL:BX571812 IPI:IPI00491874 UniGene:Dr.79297
SMR:B0S6Z1 Ensembl:ENSDART00000111661 Ensembl:ENSDART00000134918
Uniprot:B0S6Z1
Length = 1271
Score = 674 (242.3 bits), Expect = 3.2e-106, Sum P(2) = 3.2e-106
Identities = 171/475 (36%), Positives = 252/475 (53%)
Query: 542 EYSVQTQQSLSCWNPDSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQLQAHP 601
EYS +T++++S N F LIE +L +I E PGAVLVF+ GW+ I ++ L+ +P
Sbjct: 621 EYSPETKRAMSQLNEKETSFELIEALLKYIETLEVPGAVLVFLPGWNLIYFMQKHLEMNP 680
Query: 602 LLGDPSRVLLLACHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGK 661
G + +L H + EQR +F+ DGV K++L+TN+AETSITINDVVFV+D K
Sbjct: 681 HFGG-HQYRILPLHSQIPREEQRRVFEPVPDGVTKVILSTNIAETSITINDVVFVLDSCK 739
Query: 662 AKETSYDALNNTPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPEL 721
K + + NN W SK V+PG C+HL R ++ + PE+
Sbjct: 740 QKVKLFTSHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFEKLETHMTPEI 799
Query: 722 LRTPLQSLCLQIKSLQLGSISEFLSRALQPPEPL-SVKNAIEYLQIIGALDENENLTVLG 780
RTPL + L IK L+LG I FLS+A++PP PL +V A L+ + ALD N+ LT LG
Sbjct: 800 FRTPLHEVALSIKLLRLGGIGNFLSKAIEPP-PLDAVIEAEHTLRELDALDSNDELTPLG 858
Query: 781 RNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSA 840
R L+ LP+EP+LGKM+I+G IFN D V T+ A +PF+ + K L F+
Sbjct: 859 RILAKLPIEPRLGKMMIMGCIFNVGDAVCTISAATCFPEPFIN--EGKRLG-FVHRNFAG 915
Query: 841 RDYSDHLALVRAYDGWKDAE--RHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGL 898
+SDH+AL+ + W + + +C L+ TL+ + Q +L + G
Sbjct: 916 SRFSDHVALLSVFQAWDEVRVGGEDAEIRFCEHKRLNMPTLRMTWEAKVQLKEILVNVGF 975
Query: 899 VDRNTEN--CNKWSHDEHL--IRAVICAGLFPGLCSVVNKEKSIALKTMEDGQVLLYSNS 954
+ N N D +L + +++ G +P +C +KEK L T E L++ +S
Sbjct: 976 PEECLLNQVFNNVGPDNNLDLVISLLTFGSYPNVC--YHKEKRKILTT-EGRNALIHKSS 1032
Query: 955 VNAGVP----KIPYPWLVFNEKIKVNSVFLRDSTGVSDSVLLLFGGN-ISRGGLV 1004
VN K P P+ VF EKI+ ++ + T VS L+LFG I+ G V
Sbjct: 1033 VNCPFSNHDLKYPSPFFVFGEKIRTRAISAKSMTLVSPLQLILFGSKKITSNGEV 1087
Score = 443 (161.0 bits), Expect = 3.2e-106, Sum P(2) = 3.2e-106
Identities = 89/222 (40%), Positives = 132/222 (59%)
Query: 274 MHEKQQAWQESPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQY 333
++E ++ Q +L R LP ++ ++ I N VV++ G TGCGKTTQ+PQY
Sbjct: 372 LNELNYQLEQDQNLQTILTERSQLPVKNFQEQIMSTIYNNPVVIIRGATGCGKTTQVPQY 431
Query: 334 ILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRD-T 392
IL+ + R + C+I+ TQPRRISA++V+ERV+ ERGE +G+S GY VR E R
Sbjct: 432 ILDEFIKGGRASDCNIVVTQPRRISAVSVAERVSFERGEDVGKSCGYSVRFESFLPRPHA 491
Query: 393 RLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXM 452
++FCT G+ G++HVIVDEIHER +N DFLL+V M
Sbjct: 492 SILFCTVGVLLRKLESGIR--GISHVIVDEIHERDINTDFLLVVLRDVVQAYPDVRVILM 549
Query: 453 SATLNAELFSSYFGGAPMLHIPGFTYPVRAYFLENILEMTRY 494
SAT++ +F YF P++ + G +PV+ YFLE+ ++MT++
Sbjct: 550 SATIDTTMFKEYFFNCPVIEVHGRAHPVQEYFLEDCIQMTQF 591
Score = 39 (18.8 bits), Expect = 1.3e-63, Sum P(2) = 1.3e-63
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 341 AARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVG-YKVRL 384
AA+ A S++ R++ + V E + +K GESV Y V +
Sbjct: 245 AAQSCALSLV----RQLYHLGVIEAYTGQTKKKEGESVDVYPVNV 285
>UNIPROTKB|J9P6V4 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437
Ensembl:ENSCAFT00000043416 Uniprot:J9P6V4
Length = 1369
Score = 1047 (373.6 bits), Expect = 8.3e-106, P = 8.3e-106
Identities = 251/686 (36%), Positives = 378/686 (55%)
Query: 347 CSIICTQPRRISAMAVSERVAAERGEKLGES-----VGYKVRLEGMKGRDTRLMFCTTGI 401
C+I+CTQPRRISA++++ RV E G + G GY++R+E TRL++CTTG+
Sbjct: 620 CNIVCTQPRRISAVSLATRVCDELGCENGPGGRNSLCGYQIRMESRASESTRLLYCTTGV 679
Query: 402 XXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELF 461
V+HVIVDE+HER + DFLLI+ MSAT+++E F
Sbjct: 680 LLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKF 739
Query: 462 SSYFGGAPMLHIPGFTYPVRAYFLENILEMTRYRL---NTYNQ-IDDYGQEKSWKMQKQA 517
S+YF P+L I G +YPV + LE+I+E T + L + Y Q + +E + + +A
Sbjct: 740 STYFTHCPILRISGRSYPVEVFHLEDIVEETGFVLEKDSEYCQKFLEEEEEITINVTSKA 799
Query: 518 LALRKRKSSIASAVEDALEAADF-REYSVQTQQSLSCWNPDSIGFNLIEHVLCHIVKKER 576
++K + I + + F ++YS +TQ ++ NP I +LI +L ++ +R
Sbjct: 800 GGIKKHQEYIPVNTGSSADLNPFYQKYSNRTQHAILYMNPHKINLDLILELLIYLEIPDR 859
Query: 577 -P------GAVLVFMTGWDDINSLKDQLQAHPLLGDPSRVLLLACHGSMASSEQRLIFDK 629
P GAVL+F+ G I L D L R ++A H +++ +Q F
Sbjct: 860 SPQFRNIEGAVLIFLPGLAHIQQLYDLLSTDRRFFS-ERYKVIALHSILSTQDQAAAFTL 918
Query: 630 PEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXX 689
P GVRKIVLATN+AET ITI DVVFVID G+ KE Y + L+ +++SK
Sbjct: 919 PPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQR 978
Query: 690 XXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRAL 749
V+ G C+ +Y R ++ F DY +PE+LR PL+ LCL I LGS +FLS+AL
Sbjct: 979 QGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKAL 1038
Query: 750 QPPEPLSVKNAIEYLQIIGALDENE-NLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPV 808
PP+ + NA+ L+ IGA + NE LT LG++L+ LPV K+GKMLI GAIF CLDPV
Sbjct: 1039 DPPQLQVISNAMNLLRKIGACELNEPTLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPV 1098
Query: 809 MTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYE- 867
T+ A ++ + PF P +KD A+ AK+ + D SDHL + AY GWK A R + GY
Sbjct: 1099 ATLAAVMTEKSPFTTPIGRKDEADLAKSALAMAD-SDHLTIYNAYLGWKKA-RQEGGYRS 1156
Query: 868 ---YCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENC---NKWSH-----DEHLI 916
YC +NFL+ +L ++ ++++ + L+K AG T N N+ S + L+
Sbjct: 1157 EIAYCRRNFLNRTSLLTLEDVKQELMKLVKAAGFSSSTTSNDWEENRASQTLPFQEIALL 1216
Query: 917 RAVICAGLFPGLCSVV-NKEKSIALKT---MEDGQVLLYSNSVNAGVPKIPYPWLVFNEK 972
+AV+ AGL+ + ++ K + K +E Q + + Y WL++ EK
Sbjct: 1217 KAVLAAGLYDNVGKIIYTKSVDVTEKLACIVETAQGKAQVHPSSVNRDLQTYGWLLYQEK 1276
Query: 973 IKVNSVFLRDSTGVSDSVLLLFGGNI 998
++ V+LR++T ++ +LLFGG+I
Sbjct: 1277 VRYTRVYLRETTLITPFPVLLFGGDI 1302
Score = 468 (169.8 bits), Expect = 1.3e-40, P = 1.3e-40
Identities = 107/306 (34%), Positives = 176/306 (57%)
Query: 282 QESPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEA 341
Q +P+ Q++L+ R+ LP +K R+++++ + ++VVVV+GETG GK+TQ+P ++LE
Sbjct: 554 QSTPKYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLN 613
Query: 342 ARGAA-CSIICTQPRRISAMAVSERVAAERGEKLGES-----VGYKVRLEGMKGRDTRLM 395
G + C+I+CTQPRRISA++++ RV E G + G GY++R+E TRL+
Sbjct: 614 EWGTSKCNIVCTQPRRISAVSLATRVCDELGCENGPGGRNSLCGYQIRMESRASESTRLL 673
Query: 396 FCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSAT 455
+CTTG+ V+HVIVDE+HER + DFLLI+ MSAT
Sbjct: 674 YCTTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSAT 733
Query: 456 LNAELFSSYFGGAPMLHIPGFTYPVRAYFLENILEMTRYRL---NTYNQ-IDDYGQEKSW 511
+++E FS+YF P+L I G +YPV + LE+I+E T + L + Y Q + +E +
Sbjct: 734 VDSEKFSTYFTHCPILRISGRSYPVEVFHLEDIVEETGFVLEKDSEYCQKFLEEEEEITI 793
Query: 512 KMQKQALALRKRKSSIASAVEDALEAADF-REYSVQTQQSLSCWNPDSIGFNLIEHVLCH 570
+ +A ++K + I + + F ++YS +TQ ++ NP I +LI +L +
Sbjct: 794 NVTSKAGGIKKHQEYIPVNTGSSADLNPFYQKYSNRTQHAILYMNPHKINLDLILELLIY 853
Query: 571 IVKKER 576
+ +R
Sbjct: 854 LEIPDR 859
>UNIPROTKB|I3LHZ6 [details] [associations]
symbol:DHX9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:DDWIRLQ
Ensembl:ENSSSCT00000025297 Uniprot:I3LHZ6
Length = 1274
Score = 641 (230.7 bits), Expect = 6.4e-105, Sum P(2) = 6.4e-105
Identities = 161/451 (35%), Positives = 241/451 (53%)
Query: 555 NPDSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQLQAHPLLGDPSRVLLLAC 614
N F LIE +L +I PGAVLVF+ GW+ I +++ L+ +P G+ R +L
Sbjct: 620 NEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGN-HRYQILPL 678
Query: 615 HGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTP 674
H + EQR +FD GV K++L+TN+AETSITINDVV+VID K K + A NN
Sbjct: 679 HSQIPREEQRKVFDPVPAGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMT 738
Query: 675 CLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIK 734
W SK V+PG C+HL R +D + PE+ RTPL + L IK
Sbjct: 739 NYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFDRLETHMTPEMFRTPLHEIALSIK 798
Query: 735 SLQLGSISEFLSRALQPPEPL-SVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLG 793
L+LG I +FL++A++PP PL +V A L+ + ALD N+ LT LGR L+ LP+EP+ G
Sbjct: 799 LLRLGGIGQFLAKAIEPP-PLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFG 857
Query: 794 KMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAY 853
KM+I+G IF D + T+ A +PF+ + K L + F+ +SDH+AL+ +
Sbjct: 858 KMMIMGCIFYVGDAICTISAATCFPEPFIS--EGKRLGYIHR-NFAGNRFSDHVALLSVF 914
Query: 854 DGWKDAER--HQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRN--TENCNKW 909
W DA ++ +C L+ TL+ + Q +L ++G + T+
Sbjct: 915 QAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGFPEDCLLTQVFTNT 974
Query: 910 SHDEHL--IRAVICAGLFPGLCSVVNKEKSIALKTMEDGQVLLYSNSVNAGVP----KIP 963
D +L + +++ G++P +C +KEK L T E L++ +SVN K P
Sbjct: 975 GPDNNLDVVISLLAFGVYPNVC--YHKEKRKILTT-EGRNALIHKSSVNCPFSSQDMKYP 1031
Query: 964 YPWLVFNEKIKVNSVFLRDSTGVSDSVLLLF 994
P+ VF EKI+ ++ + T V+ LLLF
Sbjct: 1032 SPFFVFGEKIRTRAISAKGMTLVTPLQLLLF 1062
Score = 473 (171.6 bits), Expect = 6.4e-105, Sum P(2) = 6.4e-105
Identities = 100/228 (43%), Positives = 142/228 (62%)
Query: 269 QRSLQM-HEKQQAWQESPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKT 327
Q S+++ +E ++ + Q +L+ R LP K +L+AIS+N VV+V G TGCGKT
Sbjct: 355 QISVEIKNELMYQLEQDRDLQAILQERELLPVKKFESEILEAISQNPVVIVRGATGCGKT 414
Query: 328 TQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGM 387
TQ+PQ+IL+ + R A C+I+ TQPRRISA++V+ERVA ERGE+ G+S GY VR E +
Sbjct: 415 TQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESI 474
Query: 388 KGRD-TRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXX 446
R +MFCT G+ G++HVIVDEIHER +N DFLL+V
Sbjct: 475 LPRPHASIMFCTVGVLLRKLEAGIR--GISHVIVDEIHERDINTDFLLVVLRDVVQAYPE 532
Query: 447 XXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYFLENILEMTRY 494
MSAT++ +F YF P++ + G TYPV+ YFLE+ ++MT +
Sbjct: 533 VRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQMTHF 580
Score = 41 (19.5 bits), Expect = 2.3e-59, Sum P(2) = 2.3e-59
Identities = 14/72 (19%), Positives = 24/72 (33%)
Query: 324 CGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVR 383
CGK P Y + + R + + + M S + + V Y VR
Sbjct: 12 CGKRKMTPSYEIRAVGNKNRQKFMCEVRVEGYNYTGMGNSTNKKDAQSNAARDFVNYLVR 71
Query: 384 LEGMKGRDTRLM 395
+ +K + M
Sbjct: 72 INEVKSEEVPTM 83
>UNIPROTKB|I3LQ47 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:CU929534 Ensembl:ENSSSCT00000025611 Uniprot:I3LQ47
Length = 1370
Score = 1015 (362.4 bits), Expect = 2.5e-104, Sum P(2) = 2.5e-104
Identities = 248/686 (36%), Positives = 372/686 (54%)
Query: 347 CSIICTQPRRISAMAVSERVAAERGEKLGES-----VGYKVRLEGMKGRDTRLMFCTTGI 401
C+I+CTQPRRISA++++ RV E G + G GY++R+E TRL++CTTG+
Sbjct: 620 CNIVCTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRLLYCTTGV 679
Query: 402 XXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELF 461
V+HVIVDE+HER + DFLLI+ MSAT+++E F
Sbjct: 680 LLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKF 739
Query: 462 SSYFGGAPMLHIPGFTYPVRAYFLENILEMTRYRL---NTYNQ-IDDYGQEKSWKMQKQA 517
S+YF P+L I G +YPV + LE+I+E T + L + Y Q + +E + + +A
Sbjct: 740 STYFTHCPILRISGRSYPVEVFHLEDIIEETGFVLEKDSEYCQKFLEEEEEITINVTSKA 799
Query: 518 LALRKRKSSIASAVEDALEAADF-REYSVQTQQSLSCWNPDSIGFNLIEHVLCHIVKKER 576
++K + I + + F ++YS +TQ ++ NP I +LI +L ++ +R
Sbjct: 800 GGIKKYQEYIPVQTGTSADLNPFYQKYSNRTQHAILYMNPHKINLDLILELLTYLEITDR 859
Query: 577 -P------GAVLVFMTGWDDINSLKDQLQAHPLLGDPSRVLLLACHGSMASSEQRLIFDK 629
P GAVL+F+ G I L D L R ++A H +++ +Q F
Sbjct: 860 SPQFKNVEGAVLIFLPGLAHIQQLYDLLSTDRRFFS-ERYKVIALHSILSTQDQAAAFTL 918
Query: 630 PEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXX 689
P GVRKIVLATN+AET ITI DVVFVID G+ KE Y + L+ +++SK
Sbjct: 919 PPQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQR 978
Query: 690 XXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRAL 749
V+ G C+ +Y R ++ F DY +PE+LR PL+ LCL I LGS +FLS+AL
Sbjct: 979 QGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKAL 1038
Query: 750 QPPEPLSVKNAIEYLQIIGALDENE-NLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPV 808
PP+ + NA+ L+ IGA + NE LT LG++L+ LPV K+GKMLI GAIF CLDPV
Sbjct: 1039 DPPQLQVISNAMHLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPV 1098
Query: 809 MTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYE- 867
T+ A ++ + PF P +KD A+ AK+ + D SDHL + AY GWK A++ + GY
Sbjct: 1099 ATLAAVMTEKSPFTTPIGRKDEADLAKSALAMAD-SDHLTIYNAYLGWKKAQQ-EGGYRS 1156
Query: 868 ---YCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVD-------RNTENCNKWSHDE-HLI 916
YC +NFL+ +L ++ R L L+ + ++ S E L+
Sbjct: 1157 EIAYCRRNFLNRTSLLTLERRRTTLLKLMNENAFTHIFIAFTFYSSRASQTLSFQEIALL 1216
Query: 917 RAVICAGLFPGLCSVV-NKEKSIALKT---MEDGQVLLYSNSVNAGVPKIPYPWLVFNEK 972
+AV+ AGL+ + ++ K + K +E Q + + Y WL++ EK
Sbjct: 1217 KAVLTAGLYDNVGKIIYTKSVDVTEKLACIVETAQGKAQVHPSSVNRDLQTYGWLLYQEK 1276
Query: 973 IKVNSVFLRDSTGVSDSVLLLFGGNI 998
I+ V+LR++T ++ +LLFGG+I
Sbjct: 1277 IRYARVYLRETTLITPFSVLLFGGDI 1302
Score = 467 (169.5 bits), Expect = 5.5e-39, Sum P(2) = 5.5e-39
Identities = 107/306 (34%), Positives = 176/306 (57%)
Query: 282 QESPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEA 341
Q +P+ Q++L+ R+ LP +K R+++++ + ++VVVV+GETG GK+TQ+P ++LE
Sbjct: 554 QSTPKYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLN 613
Query: 342 ARGAA-CSIICTQPRRISAMAVSERVAAERGEKLGES-----VGYKVRLEGMKGRDTRLM 395
G + C+I+CTQPRRISA++++ RV E G + G GY++R+E TRL+
Sbjct: 614 EWGTSKCNIVCTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRLL 673
Query: 396 FCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSAT 455
+CTTG+ V+HVIVDE+HER + DFLLI+ MSAT
Sbjct: 674 YCTTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSAT 733
Query: 456 LNAELFSSYFGGAPMLHIPGFTYPVRAYFLENILEMTRYRL---NTYNQ-IDDYGQEKSW 511
+++E FS+YF P+L I G +YPV + LE+I+E T + L + Y Q + +E +
Sbjct: 734 VDSEKFSTYFTHCPILRISGRSYPVEVFHLEDIIEETGFVLEKDSEYCQKFLEEEEEITI 793
Query: 512 KMQKQALALRKRKSSIASAVEDALEAADF-REYSVQTQQSLSCWNPDSIGFNLIEHVLCH 570
+ +A ++K + I + + F ++YS +TQ ++ NP I +LI +L +
Sbjct: 794 NVTSKAGGIKKYQEYIPVQTGTSADLNPFYQKYSNRTQHAILYMNPHKINLDLILELLTY 853
Query: 571 IVKKER 576
+ +R
Sbjct: 854 LEITDR 859
Score = 38 (18.4 bits), Expect = 2.5e-104, Sum P(2) = 2.5e-104
Identities = 15/51 (29%), Positives = 23/51 (45%)
Query: 140 LTMLLRNKDEQE---VVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFS 187
L +++ NK EQ+ V++ KK D +S T L Y + FS
Sbjct: 84 LKVVINNKLEQKIIGVINEHKKQNNDKGVISGRLTAKKLQDL-YMALQAFS 133
>DICTYBASE|DDB_G0275313 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0275313 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GenomeReviews:CM000151_GR EMBL:AAFI02000013
GO:GO:0003725 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 RefSeq:XP_643861.1 ProteinModelPortal:Q869Z1
EnsemblProtists:DDB0233740 GeneID:8619912 KEGG:ddi:DDB_G0275313
InParanoid:Q869Z1 OMA:CEYLLEN Uniprot:Q869Z1
Length = 1472
Score = 546 (197.3 bits), Expect = 5.4e-104, Sum P(4) = 5.4e-104
Identities = 108/268 (40%), Positives = 163/268 (60%)
Query: 557 DSIGFNLIEHVLCHIVKK---ERPGAVLVFMTGWDDINSLKDQLQAHPLLGDPSRVLLLA 613
D + +I ++ HIV K ++L+F+ GW+DI+ ++ ++ HP+L + + L+L
Sbjct: 926 DDVDHEMILQLIVHIVTKVSSTSEDSILIFLPGWEDISQTRELMRRHPMLRNENEFLILP 985
Query: 614 CHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNT 673
H S++ Q +F+KP +RKIVL+TN+AETSITINDVV+VID K K ++ +
Sbjct: 986 LHSSVSMQLQAKVFEKPPPKIRKIVLSTNIAETSITINDVVYVIDSAKVKLKYHETQRDL 1045
Query: 674 PCLLPSWISKXXXXXXXXXXXXVQP-GECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQ 732
W K V+ G CYH+ R Y+ ++QL E+ R PL LCLQ
Sbjct: 1046 TLFQTVWACKSSLKQRRGRAGRVRKDGVCYHMVSRDRYNTLEEFQLSEMRRMPLHELCLQ 1105
Query: 733 IKSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKL 792
+K L LG + FLS AL+PPE S+ NAI L +GAL+ N+ LT LG LS +PV+P++
Sbjct: 1106 VKVLVLGDVIGFLSEALEPPETKSIDNAINLLIDLGALNANQELTPLGLQLSFIPVDPRI 1165
Query: 793 GKMLILGAIFNCLDPVMTVVAGLSVRDP 820
GKM+ILG+ F CLDP++T+ + + ++P
Sbjct: 1166 GKMIILGSYFRCLDPILTIASFSNQKNP 1193
Score = 428 (155.7 bits), Expect = 5.4e-104, Sum P(4) = 5.4e-104
Identities = 85/243 (34%), Positives = 142/243 (58%)
Query: 269 QRSLQMHEKQQAWQESPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTT 328
+R H K+Q + E +++ + R LP +K+R L+++I NQ++++ G+TGCGKTT
Sbjct: 693 ERRAYEHNKRQ----TAEYKRIYQKRTELPIFKQRSHLIESIKNNQIIIIMGDTGCGKTT 748
Query: 329 QLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMK 388
Q+PQ+++E ++ C+I+ TQPRRIS + +ER+A ER EK+G++VGY++R + ++
Sbjct: 749 QIPQFVIEDMIDSGHAPYCNIVMTQPRRISVLGAAERMAYERLEKVGDTVGYQIRFDNVQ 808
Query: 389 GRDT-RLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXX 447
T +L+ CT GI V+H+ +DE+HER ++ DFLLI+
Sbjct: 809 PLGTSKLLVCTPGILLKRMYSDMKLHNVSHLFIDEVHERDIHTDFLLIILKKLLADNNNL 868
Query: 448 XXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYFLENILEMTRYRLNTYN--QIDDY 505
MSAT++ L S+YFG P++ + + + + YFLE+I + +Y Q DD
Sbjct: 869 RVILMSATMDNSLVSAYFGTCPVIKLTSYHHIAQEYFLEDISKQLNDPTISYRDEQSDDV 928
Query: 506 GQE 508
E
Sbjct: 929 DHE 931
Score = 191 (72.3 bits), Expect = 5.4e-104, Sum P(4) = 5.4e-104
Identities = 50/161 (31%), Positives = 84/161 (52%)
Query: 844 SDHLALVRAYDGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDR-- 901
SDHL+ + ++GW + + +YC ++FLS L+ I ++KQ L + D G+++
Sbjct: 1237 SDHLSFLNIFNGWLQSRMDGTEDQYC-QDFLSIPLLQQILKVKKQLLSTINDLGIINAQL 1295
Query: 902 -----NTENCNKWSHDEHLIRAVICAGLFPGLCSVVNKEKSIALKTMEDGQVLLYSNSV- 955
N N+ S++ +IRA+IC+GLFP ++ + K KT+ + L S+ V
Sbjct: 1296 RDGFVNNSFFNENSNNLDIIRAIICSGLFP---NIARQRKKREFKTLSENTFLHPSSIVY 1352
Query: 956 NAGVPKIPYP-WLVFNEKIKVNSVFLRDSTGVSDSVLLLFG 995
N P W++F EK K F++ T + + LLLFG
Sbjct: 1353 NLFQELNPKENWVIFEEKFKTKLTFIKTITRIPEISLLLFG 1393
Score = 46 (21.3 bits), Expect = 5.4e-104, Sum P(4) = 5.4e-104
Identities = 12/46 (26%), Positives = 23/46 (50%)
Query: 225 LSQKYINASMSSLSNVGSTTNDEGLYEQQEQLVQNSVVRERILRQR 270
++ IN+ ++SL+N + N+ Y E + N IL+Q+
Sbjct: 171 INNNIINSGLNSLNNNNNNNNNNN-YSGLENNINNYQQTPPILQQQ 215
Score = 45 (20.9 bits), Expect = 1.3e-63, Sum P(3) = 1.3e-63
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 105 AYQDESSDDSDRE 117
+Y+DE SDD D E
Sbjct: 919 SYRDEQSDDVDHE 931
>UNIPROTKB|I3LG95 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000030291 Uniprot:I3LG95
Length = 1370
Score = 1010 (360.6 bits), Expect = 8.3e-104, Sum P(2) = 8.3e-104
Identities = 246/686 (35%), Positives = 375/686 (54%)
Query: 347 CSIICTQPRRISAMAVSERVAAERGEKLGES-----VGYKVRLEGMKGRDTRLMFCTTGI 401
C+I+CTQPRRISA++++ RV E G + G GY++R+E TRL++CTTG+
Sbjct: 620 CNIVCTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRLLYCTTGV 679
Query: 402 XXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELF 461
V+HVIVDE+HER + DFLLI+ MSAT+++E F
Sbjct: 680 LLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKF 739
Query: 462 SSYFGGAPMLHIPGFTYPVRAYFLENILEMTRYRL---NTYNQ-IDDYGQEKSWKMQKQA 517
S+YF P+L I G +YPV + LE+I+E T + L + Y Q + +E + + +A
Sbjct: 740 STYFTHCPILRISGRSYPVEVFHLEDIIEETGFVLEKDSEYCQKFLEEEEEITINVTSKA 799
Query: 518 LALRKRKSSIASAVEDALEAADF-REYSVQTQQSLSCWNPDSIGFNLIEHVLCHIVKKER 576
++K + I + + F ++YS +TQ ++ NP I +LI +L ++ +R
Sbjct: 800 GGIKKYQEYIPVQTGTSADLNPFYQKYSNRTQHAILYMNPHKINLDLILELLTYLEITDR 859
Query: 577 -P------GAVLVFMTGWDDINSLKDQLQAHPLLGDPSRVLLLACHGSMASSEQRLIFDK 629
P GAVL+F+ G I L D L R ++A H +++ +Q F
Sbjct: 860 SPQFKNVEGAVLIFLPGLAHIQQLYDLLSTDRRFFS-ERYKVIALHSILSTQDQAAAFTL 918
Query: 630 PEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXX 689
P GVRKIVLATN+AET ITI DVVFVID G+ KE Y + L+ +++SK
Sbjct: 919 PPQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQR 978
Query: 690 XXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRAL 749
V+ G C+ +Y R ++ F DY +PE+LR PL+ LCL I LGS +FLS+AL
Sbjct: 979 QGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKAL 1038
Query: 750 QPPEPLSVKNAIEYLQIIGALDENE-NLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPV 808
PP+ + NA+ L+ IGA + NE LT LG++L+ LPV K+GKMLI GAIF CLDPV
Sbjct: 1039 DPPQLQVISNAMHLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPV 1098
Query: 809 MTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYE- 867
T+ A ++ + PF P +KD A+ AK+ + D SDHL + AY GWK A++ + GY
Sbjct: 1099 ATLAAVMTEKSPFTTPIGRKDEADLAKSALAMAD-SDHLTIYNAYLGWKKAQQ-EGGYRS 1156
Query: 868 ---YCWKNFLSAQTLKAIDSLRKQF------LFLLKDAGLVDRNTENCNKW-SHDE-HLI 916
YC +NFL+ +L ++ ++ F + + + + + ++ S E L+
Sbjct: 1157 EIAYCRRNFLNRTSLLTLEEIKVSFPETIAIQYFYRFYSIKTYYSSSASQTLSFQEIALL 1216
Query: 917 RAVICAGLFPGLCSVV-NKEKSIALKT---MEDGQVLLYSNSVNAGVPKIPYPWLVFNEK 972
+AV+ AGL+ + ++ K + K +E Q + + Y WL++ EK
Sbjct: 1217 KAVLTAGLYDNVGKIIYTKSVDVTEKLACIVETAQGKAQVHPSSVNRDLQTYGWLLYQEK 1276
Query: 973 IKVNSVFLRDSTGVSDSVLLLFGGNI 998
I+ V+LR++T ++ +LLFGG+I
Sbjct: 1277 IRYARVYLRETTLITPFSVLLFGGDI 1302
Score = 467 (169.5 bits), Expect = 5.5e-39, Sum P(2) = 5.5e-39
Identities = 107/306 (34%), Positives = 176/306 (57%)
Query: 282 QESPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEA 341
Q +P+ Q++L+ R+ LP +K R+++++ + ++VVVV+GETG GK+TQ+P ++LE
Sbjct: 554 QSTPKYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLN 613
Query: 342 ARGAA-CSIICTQPRRISAMAVSERVAAERGEKLGES-----VGYKVRLEGMKGRDTRLM 395
G + C+I+CTQPRRISA++++ RV E G + G GY++R+E TRL+
Sbjct: 614 EWGTSKCNIVCTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRLL 673
Query: 396 FCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSAT 455
+CTTG+ V+HVIVDE+HER + DFLLI+ MSAT
Sbjct: 674 YCTTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSAT 733
Query: 456 LNAELFSSYFGGAPMLHIPGFTYPVRAYFLENILEMTRYRL---NTYNQ-IDDYGQEKSW 511
+++E FS+YF P+L I G +YPV + LE+I+E T + L + Y Q + +E +
Sbjct: 734 VDSEKFSTYFTHCPILRISGRSYPVEVFHLEDIIEETGFVLEKDSEYCQKFLEEEEEITI 793
Query: 512 KMQKQALALRKRKSSIASAVEDALEAADF-REYSVQTQQSLSCWNPDSIGFNLIEHVLCH 570
+ +A ++K + I + + F ++YS +TQ ++ NP I +LI +L +
Sbjct: 794 NVTSKAGGIKKYQEYIPVQTGTSADLNPFYQKYSNRTQHAILYMNPHKINLDLILELLTY 853
Query: 571 IVKKER 576
+ +R
Sbjct: 854 LEITDR 859
Score = 38 (18.4 bits), Expect = 8.3e-104, Sum P(2) = 8.3e-104
Identities = 15/51 (29%), Positives = 23/51 (45%)
Query: 140 LTMLLRNKDEQE---VVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFS 187
L +++ NK EQ+ V++ KK D +S T L Y + FS
Sbjct: 84 LKVVINNKLEQKIIGVINEHKKQNNDKGVISGRLTAKKLQDL-YMALQAFS 133
>WB|WBGene00004355 [details] [associations]
symbol:rha-1 species:6239 "Caenorhabditis elegans"
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0007281 "germ cell development"
evidence=IMP] [GO:0045814 "negative regulation of gene expression,
epigenetic" evidence=IMP] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0051301 GO:GO:0007067 GO:GO:0006355
GO:GO:0003677 Gene3D:3.30.160.20 GO:GO:0006351 GO:GO:0007281
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000247063 GeneTree:ENSGT00550000074257 KO:K13184
EMBL:Z50071 PIR:T24664 RefSeq:NP_495890.2 ProteinModelPortal:Q22307
SMR:Q22307 STRING:Q22307 PaxDb:Q22307 EnsemblMetazoa:T07D4.3.1
EnsemblMetazoa:T07D4.3.2 GeneID:174417 KEGG:cel:CELE_T07D4.3
UCSC:T07D4.3 CTD:174417 WormBase:T07D4.3 InParanoid:Q22307
OMA:DDWIRLQ NextBio:883938 GO:GO:0045814 Uniprot:Q22307
Length = 1301
Score = 972 (347.2 bits), Expect = 7.4e-98, P = 7.4e-98
Identities = 248/750 (33%), Positives = 400/750 (53%)
Query: 267 LRQRSLQMHEKQQAWQESPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGK 326
+ Q S ++ EK+ ++ K+ R LP + R+ +++ ++EN+V ++ GETGCGK
Sbjct: 352 MEQISQRIMEKED-FKRGEALDKITAQRGELPVAQYRENIVQTVAENRVTLIKGETGCGK 410
Query: 327 TTQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEG 386
+TQ+ Q++LES E + GA+ + + +QPRRISA++++ERVA ERGE++GE+ GY VR +
Sbjct: 411 STQVAQFLLESFLENSNGASFNAVVSQPRRISAISLAERVANERGEEVGETCGYNVRFDS 470
Query: 387 MKGRDT-RLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXX 445
R +MFCT G+ G++HVI+DEIHER ++ DF+LIV
Sbjct: 471 ATPRPYGSIMFCTVGVLLRMMENGLR--GISHVIIDEIHERDVDTDFVLIVLREMISTYR 528
Query: 446 XXXXXXMSATLNAELFSSYF------GGAPMLHIPGFTYPVRAYFLENILEMTRYRLNTY 499
MSAT++ +LF+++F G P++ + G T+PV++++LE+IL N
Sbjct: 529 DLRVVLMSATIDTDLFTNFFSSIPDVGPTPVITMHGRTFPVQSFYLEDILH------NLQ 582
Query: 500 NQIDDYGQEKSWKMQKQALALRKRKSSIASAVEDALEAADFREYSVQTQQSLSCWNPDSI 559
+ ++ Q+K K + + + D + + ++S + I
Sbjct: 583 HMPEEPDQKKRKKGGPPPPDDDEGDEEVDDKGRNMNILTD-PSINESLKTAMSRISEKDI 641
Query: 560 GFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQLQAHPLLGDPSRVLLLACHGSMA 619
F +IE +L I + GAVLVF+ GW +I +L ++L H G ++ +L H +
Sbjct: 642 PFGVIEAILNDIASRGVDGAVLVFLPGWAEIMTLCNRLLEHQEFGQANKYEILPLHSQLT 701
Query: 620 SSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPS 679
S EQR +F+ G RKI+++TN+AETSITI+DVV+VID KAKE Y + NN
Sbjct: 702 SQEQRKVFNH-YPGKRKIIVSTNIAETSITIDDVVYVIDSCKAKERMYTSNNNMVHFATV 760
Query: 680 WISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLG 739
W SK V+ G +HL + ++A D+ E+LR PL + L IK L+LG
Sbjct: 761 WASKTNVIQRRGRAGRVRAGYAFHLCSKMRFEALDDHGTAEMLRIPLHQIALTIKLLRLG 820
Query: 740 SISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILG 799
S+ EFL +ALQPP V + LQ +GALD N LT LG+ L+ +P+EP + K+LILG
Sbjct: 821 SVGEFLGKALQPPPYDMVVESEAVLQAMGALDRNLELTSLGKMLARMPIEPVIAKVLILG 880
Query: 800 AIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESA-KAQFSARDYSDHLALVRAYDGWKD 858
+ V + +S PF+ P +K S + +F+ +SDH+A+V G+++
Sbjct: 881 TALGAGSVMCDVASAMSFPTPFV-PREKHHSRLSGTQRKFAGNKFSDHVAIVSVIQGYRE 939
Query: 859 AERHQSGY---EYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRN-----TENCNKWS 910
A + + E+C + LS LK D R+Q + +L++ + + N N
Sbjct: 940 AVQMGASAAEREFCERYSLSNPVLKMTDGARRQLIDVLRNQCSFPEDILFDISVNVNGPD 999
Query: 911 HDEHLIRAVICAGLFPGLCSVVNKEKSIALKTMEDGQVLL--YSNSV---NAGVPKIPYP 965
+ +L+R+++ L+P + V K K + T+E L+ YS V N P P
Sbjct: 1000 RELNLMRSLLVMALYPNVAYYVGKRKVL---TIEQSSALINKYSMLVPMNNRQEMDFPSP 1056
Query: 966 WLVFNEKIKVNSVFLRDSTGVSDSVLLLFG 995
LVF EK++ + + + +S LL+FG
Sbjct: 1057 LLVFTEKVRTRCISCKQMSVISAIQLLVFG 1086
>ASPGD|ASPL0000008624 [details] [associations]
symbol:AN5839 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GO:GO:0008026 OrthoDB:EOG4TXG12 RefSeq:XP_663443.1
EnsemblFungi:CADANIAT00007203 GeneID:2870747 KEGG:ani:AN5839.2
HOGENOM:HOG000213693 OMA:KNIRRAI Uniprot:Q5B0U1
Length = 1436
Score = 967 (345.5 bits), Expect = 9.4e-97, P = 9.4e-97
Identities = 259/797 (32%), Positives = 407/797 (51%)
Query: 135 EWRWKLTMLLRNKDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKV-VVFSKAPLPN 193
E RW + + E V++ F + +AT + YA +F P +
Sbjct: 476 EVRWSKPQEMPSPFSHEAVTQKSTSYATFVSMDKIATPTSQQAEAYASTFALFILFPQNS 535
Query: 194 YRSDLDEKRPQ--REVILPFGLLREVDAHLKAYLSQKYINASMSSL--SNVGSTTNDEGL 249
+ P R++ F ++V + K + S+ L N G+ +D L
Sbjct: 536 KEGKAYMRLPAAWRDLWEEFANAKKVQDDE----ADKQVVKSLRKLIQENHGTFEDDVVL 591
Query: 250 YEQQEQLVQNSVVRERI-LRQRSLQ---MHEK-QQAWQE---SPEGQKMLEFRRSLPSYK 301
+ + +N R R +R + + ++E+ Q W E +P Q M++ R LP +
Sbjct: 592 SDNFRK--RNGTPRNRSPVRAGAKEAPGINEQLSQIWMEKASTPAFQYMVQSRMQLPIWT 649
Query: 302 ERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRRISAMA 361
++ +L ++ ++ +++ ETG GK+TQ+P +ILE E + R C I T+PRRISA++
Sbjct: 650 FKNEILNTLNSHRALIICSETGSGKSTQIPSFILEHEMLSGR--PCKIYVTEPRRISAIS 707
Query: 362 VSERVAAERGEK---LGES---VGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXGV 415
++ RV+ E GE +G S +G+ VRLE TRL+F TTG+ +
Sbjct: 708 LARRVSEELGESKNDVGTSRSLIGFAVRLESKVSPATRLVFATTGVVVRMLERPDDFQDI 767
Query: 416 THVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPG 475
THV++DE+HER ++ DFLLIV MSAT++A FS+Y GG P+L+IPG
Sbjct: 768 THVVLDEVHERSIDSDFLLIVLRRLMQKRQDLKLILMSATVDANRFSTYLGGVPVLNIPG 827
Query: 476 FTYPVRAYFLENILEMTRYRL--NTYNQIDDYGQEKSWKMQKQALALRKRKSSIASAVED 533
T+PV FLE+ +E+T+YR N N DD ++ + Q + + +A+ +E+
Sbjct: 828 RTFPVETKFLEDAIELTQYRTTENESNVADDEYEDDAETSQGET-------TGVAATLEN 880
Query: 534 ALEAADFREYSVQTQQSLSCWNPDSIGFNLIEHVLCHIVKKER----PGAVLVFMTGWDD 589
YS QT++++ ++ + + LI+ +L + A+LVF+ G +
Sbjct: 881 ---------YSKQTRETIMNFDEYRLDYQLIKKLLMKLATAPEMEYYSKAILVFLPGMAE 931
Query: 590 INSLKDQLQAHPLLGDPSRVLLLACHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSIT 649
I L D+L + P ++ A H S+AS EQ F P DG+RKIV+ATN+AET IT
Sbjct: 932 IRRLNDELLSEPTF--QHGWIIHALHSSIASDEQEKAFVVPPDGMRKIVIATNIAETGIT 989
Query: 650 INDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYV 709
I D+ VID GK K +D L+ ++IS+ VQ G C+H++ ++
Sbjct: 990 IPDITAVIDAGKEKTMRFDERRQLSRLVEAFISRANAKQRRGRAGRVQRGICFHMFTKHR 1049
Query: 710 YD-AFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIG 768
+D A+ Q PE+LR LQ L L++K +LG + L AL PP +++ AI+ L+ +
Sbjct: 1050 HDNLLAEQQTPEMLRLSLQDLVLRVKICKLGEVEPTLLEALDPPSSKNIRRAIDALKEVK 1109
Query: 769 ALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKK 828
AL ENLT LG+ L+ LP++ LGK++I GA F CLD +++ A LS + PF+
Sbjct: 1110 ALTSTENLTPLGQQLAKLPLDVFLGKLIIHGAFFKCLDAAISIAAILSCKSPFVNTMGSN 1169
Query: 829 DLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYEY--CWKNFLSAQTLKAIDSLR 886
E+ + F D SD L + AY WK EY C KNFLS QTL I+ ++
Sbjct: 1170 AQKEAVRLGFRRGD-SDLLTVYNAYCAWKRTRSTPGANEYAFCRKNFLSPQTLLNIEDVK 1228
Query: 887 KQFLFLLKDAGLVDRNT 903
Q + + DAGLV +T
Sbjct: 1229 LQLMVSIADAGLVTLDT 1245
>FB|FBgn0030246 [details] [associations]
symbol:CG1582 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0008270 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 KO:K13026 EMBL:AY119481
RefSeq:NP_572663.1 UniGene:Dm.11248 SMR:Q9VZ55
EnsemblMetazoa:FBtr0073403 GeneID:32021 KEGG:dme:Dmel_CG1582
UCSC:CG1582-RA FlyBase:FBgn0030246 InParanoid:Q9VZ55 OMA:IFQCLDS
OrthoDB:EOG4RJDGG ChiTaRS:CG1582 GenomeRNAi:32021 NextBio:776414
Uniprot:Q9VZ55
Length = 1288
Score = 844 (302.2 bits), Expect = 1.8e-94, Sum P(3) = 1.8e-94
Identities = 231/676 (34%), Positives = 352/676 (52%)
Query: 241 GSTTNDEGLYEQQEQLVQNSVVRERILRQRSLQMHEKQQAWQESPEGQKMLEFRRSLPSY 300
G T+ ++G +++ V+ R L Q+ ++ K++ +Q K+++ R+ LP++
Sbjct: 407 GQTSRNDGGHQRN---VEAQTRENRRLLQQFVE-RRKEERYQ------KIIDGRKQLPAF 456
Query: 301 KERDALLKAISENQVVVVSGETGCGKTTQLPQYILES------ETEAARGAA-CSIICTQ 353
E + +L I + VVV+SGETGCGK+TQ+PQ+IL++ + A IICTQ
Sbjct: 457 AEIERILALIESSPVVVISGETGCGKSTQVPQFILDNWFFRALQLPAKENLPHVEIICTQ 516
Query: 354 PRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXX 413
PRR+SA+ V+ERVAAER +++G+ VGY++RLE + TRL FCTTGI
Sbjct: 517 PRRLSAIGVAERVAAERLDRIGQLVGYQIRLENKVSQSTRLSFCTTGILLRRLASDPLLG 576
Query: 414 GVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHI 473
VTHVIVDE+HER DFLL++ MSATLNA LFS YFGGAP+L I
Sbjct: 577 SVTHVIVDEVHERSEESDFLLLILKNLLRERKDLKVILMSATLNAALFSDYFGGAPVLDI 636
Query: 474 PGFTYPVRAYFLENILEMTRYRLNTYNQIDDYGQEKSWKMQKQALALRKRKSSIASA--- 530
PG T+PV+ FLE+ILEM+ + + +Y + K++KQ + +R+ A
Sbjct: 637 PGRTFPVQQLFLEDILEMSDF-------VMEYDTKYCRKLKKQEQEILERELEYADVQAS 689
Query: 531 -------VEDA-LEAAD----FREYSVQTQQSLSCWNPDSIGFNLIEHVLCHIVKKE--- 575
++D L A+ + EYS T +S+ P +I LIE VL +IV+
Sbjct: 690 GEAPGKKIKDEKLTLAETYQRYAEYSKPTCKSIYLMEPMTINPELIESVLKYIVEGSHDW 749
Query: 576 -RPGAVLVFMTGWDDINSLKDQLQAHPLLGDPS-RVLLLACHGSMASSEQRLIFDKPEDG 633
R G +L+F+ G+ +I S+ D L + L + + +L+ H +++ +Q L+F K G
Sbjct: 750 PREGTILIFLPGFGEIQSVHDSLLDNALFSPRAGKFILVPLHSALSGEDQALVFKKAPPG 809
Query: 634 VRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXX 693
RKIVL+TN+AETS+TI+D VFV+DCG KE +D+ N L W+S+
Sbjct: 810 KRKIVLSTNIAETSVTIDDCVFVVDCGLMKEKCFDSNRNMESLDLVWVSRANAKQRKGRA 869
Query: 694 XXVQPGECYHLYP--RYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQP 751
V PG C HLY RY Y A +PE+ R PL+ + L+IK+LQ + LS L+
Sbjct: 870 GRVMPGVCIHLYTSYRYQYHILAQ-PVPEIQRVPLEQIVLRIKTLQTFASRNTLSVLLET 928
Query: 752 PEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLI---LGAI--FNCLD 806
E + + ++GAL ++ L + P+ L + + +G + + +
Sbjct: 929 LEAPTEDS------VLGALTRLRDVGALDAEDQLTPLGHHLAALPVDVRIGKLMLYGAIF 982
Query: 807 PVMTVVAGLSVRDPFLMPFDK--KDLAESAKAQ-FSARDYSDHLALVRAYDGWKDAERHQ 863
+ V ++ PF E+ K + A SDHL ++ AY W D R
Sbjct: 983 QCLDSVLTIAACLSNKSPFVSPLNKRTEADKCKRMFALGNSDHLTVLNAYRKWLDVARR- 1041
Query: 864 SGYEYCWKNFLSAQTL 879
G +N+ S L
Sbjct: 1042 -GNYAASRNYASEHFL 1056
Score = 629 (226.5 bits), Expect = 1.0e-64, Sum P(3) = 1.0e-64
Identities = 152/426 (35%), Positives = 236/426 (55%)
Query: 540 FREYSVQTQQSLSCWNPDSIGFNLIEHVLCHIVKKE----RPGAVLVFMTGWDDINSLKD 595
+ EYS T +S+ P +I LIE VL +IV+ R G +L+F+ G+ +I S+ D
Sbjct: 711 YAEYSKPTCKSIYLMEPMTINPELIESVLKYIVEGSHDWPREGTILIFLPGFGEIQSVHD 770
Query: 596 QLQAHPLLGDPS-RVLLLACHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVV 654
L + L + + +L+ H +++ +Q L+F K G RKIVL+TN+AETS+TI+D V
Sbjct: 771 SLLDNALFSPRAGKFILVPLHSALSGEDQALVFKKAPPGKRKIVLSTNIAETSVTIDDCV 830
Query: 655 FVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYP--RYVYDA 712
FV+DCG KE +D+ N L W+S+ V PG C HLY RY Y
Sbjct: 831 FVVDCGLMKEKCFDSNRNMESLDLVWVSRANAKQRKGRAGRVMPGVCIHLYTSYRYQYHI 890
Query: 713 FADYQLPELLRTPLQSLCLQIKSLQLGSISEFLS---RALQPPEPLSVKNAIEYLQIIGA 769
A +PE+ R PL+ + L+IK+LQ + LS L+ P SV A+ L+ +GA
Sbjct: 891 LAQ-PVPEIQRVPLEQIVLRIKTLQTFASRNTLSVLLETLEAPTEDSVLGALTRLRDVGA 949
Query: 770 LDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKD 829
LD + LT LG +L+ LPV+ ++GK+++ GAIF CLD V+T+ A LS + PF+ P +K+
Sbjct: 950 LDAEDQLTPLGHHLAALPVDVRIGKLMLYGAIFQCLDSVLTIAACLSNKSPFVSPLNKRT 1009
Query: 830 LAESAKAQFSARDYSDHLALVRAYDGWKDAER---HQSGYEYCWKNFLSAQTLKAIDSLR 886
A+ K F+ + SDHL ++ AY W D R + + Y ++FLS TL+ I L+
Sbjct: 1010 EADKCKRMFALGN-SDHLTVLNAYRKWLDVARRGNYAASRNYASEHFLSLNTLETIADLK 1068
Query: 887 KQFLFLLKDAGLVD----RNTEN-CN--------KWSHD---EHLIRAVICAGLFPGLCS 930
Q+L LL G V R +N C+ + +H+ L+ +++CA L+P +
Sbjct: 1069 YQYLELLVSIGFVPIDVPRRRKNACDNILTLTGVEQNHNGDNNRLLTSLLCAALYPNIVK 1128
Query: 931 VVNKEK 936
++ ++
Sbjct: 1129 IMTPDR 1134
Score = 105 (42.0 bits), Expect = 1.8e-94, Sum P(3) = 1.8e-94
Identities = 20/60 (33%), Positives = 38/60 (63%)
Query: 938 IALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVSDSVLLLFGGN 997
+ KT DG V ++ +SVN+ V P+LVF EK++ +++++RD + + ++LF G+
Sbjct: 1153 LRFKTRGDGYVKIHPSSVNSQVSVFQAPFLVFQEKVRTSAIYIRDCSMLPLIAMVLFAGS 1212
Score = 42 (19.8 bits), Expect = 1.8e-94, Sum P(3) = 1.8e-94
Identities = 8/29 (27%), Positives = 19/29 (65%)
Query: 266 ILRQRSLQMHEKQQAWQESPEGQKMLEFR 294
+L +R +++ +++Q E P Q++L+ R
Sbjct: 153 LLYRRYMRIPDEEQLTLEPPSEQEILDMR 181
>POMBASE|SPBC15C4.05 [details] [associations]
symbol:SPBC15C4.05 "ATP-dependent RNA/DNA helicase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPBC15C4.05 GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GO:GO:0003676 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 PIR:T39475 RefSeq:NP_595925.1
ProteinModelPortal:O60114 EnsemblFungi:SPBC15C4.05.1 GeneID:2539831
KEGG:spo:SPBC15C4.05 OrthoDB:EOG4TXG12 NextBio:20800979
Uniprot:O60114
Length = 1428
Score = 904 (323.3 bits), Expect = 7.2e-90, P = 7.2e-90
Identities = 217/639 (33%), Positives = 346/639 (54%)
Query: 283 ESPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAA 342
ES +K FR LP+ R+ ++ A++ +Q++++SG+TGCGK+TQ+P ++LE+ T+
Sbjct: 617 ESESAEKFKVFRNQLPATMFRETIIDAVNNSQLLIISGDTGCGKSTQIPAFLLENSTK-- 674
Query: 343 RGAACSIICTQPRRISAMAVSERVAAERG-----EKLGESVGYKVRLEGMKGRDTRLMFC 397
G A I T+PRRISA++++ RV+ E G + E VGY VRL+ T L +
Sbjct: 675 NGKAVKIYVTEPRRISAISLANRVSQELGGNPPSARSHELVGYSVRLDSKCTPLTPLTYV 734
Query: 398 TTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLN 457
TTG VTH+I+DE+HER ++ D LLI MSATLN
Sbjct: 735 TTGTFLRLLEVGNEIESVTHLIIDEVHERSIDSDLLLIHVLHLLKQHPHLKIIIMSATLN 794
Query: 458 AELFSSYFGGAPMLHIPGFTYPVRAYFLENILEMTRYRLNTYNQI-DDYGQEKSWKMQKQ 516
AE F YF G+ ++ IPG TYPV ++LE+IL + N D +E ++ +Q
Sbjct: 795 AEKFQLYFEGSNLITIPGKTYPVHRFYLEDILSQFGNDKSFGNAAGQDVIEEDDYETDQQ 854
Query: 517 ALALRKRKSSIASAVEDALEAADFREYSVQTQQSLSCWNPDSIGFNLIEHVLCHIVKKER 576
++ KS+ EDA+ V+ + +N +I + LI ++L +I +
Sbjct: 855 DASI-SNKSA-----EDAI---------VEMNLIPAWYNEKAINYGLIVYLLKYIFTEGD 899
Query: 577 PG---AVLVFMTGWDDINSLKDQLQAHPLLGDPSRVLLLACHGSMASSEQRLIFDKPEDG 633
P VLVF+ G +I +K ++ P+ + + + H +++S++Q+ +F+ P G
Sbjct: 900 PKFSKCVLVFLPGISEILRVKSLIEDMPMFRNHRKFCIYMLHSTLSSAQQQSVFNIPPKG 959
Query: 634 VRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXX 693
RKIVL+TN+AET +TI DV VID G +E Y++ + L +++SK
Sbjct: 960 CRKIVLSTNIAETGVTIPDVTCVIDTGVHREMRYNSRRHLSRLTDTFVSKANAKQRSGRA 1019
Query: 694 XXVQPGECYHLYPRYVYDA-FADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPP 752
VQ G CYHL+ ++ +D F YQ PE+LR LQ + L++K Q+G + + L +AL PP
Sbjct: 1020 GRVQEGICYHLFSKFKHDTQFLSYQTPEILRLNLQEVVLRVKMCQMGDVQDVLGKALDPP 1079
Query: 753 EPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVV 812
++ A+E L +GAL ENE LT LG+ LS LPV+ LGK+L+LG + C+D ++V
Sbjct: 1080 SSTNIIRALEKLHQVGALSENEKLTKLGKFLSQLPVDANLGKILVLGCFYKCVDAASSIV 1139
Query: 813 AGLSVRDPFLMPFDKKDLAESAKAQFSARDY-SDHLALVRAYDGWKDAERHQSGYE---Y 868
A L++ PF D + A A+ F+ + SD + + AY W++ G + +
Sbjct: 1140 AMLTIGSPFRKSVDNEFSANKARLSFAKENTRSDLVLMYYAYCAWREICLSPLGPDEDSF 1199
Query: 869 CWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRN-TENC 906
+ +L+ + L +SL+ Q L LKD L+ + + C
Sbjct: 1200 AKEKYLNLEALSMTESLKIQLLSELKDMKLLGASDVDTC 1238
>UNIPROTKB|G4MZR9 [details] [associations]
symbol:MGG_07059 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 Gene3D:3.10.110.10
InterPro:IPR016135 SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM001232 SUPFAM:SSF46934 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003715240.1
ProteinModelPortal:G4MZR9 EnsemblFungi:MGG_07059T0 GeneID:2682944
KEGG:mgr:MGG_07059 Uniprot:G4MZR9
Length = 1404
Score = 564 (203.6 bits), Expect = 2.2e-88, Sum P(3) = 2.2e-88
Identities = 140/381 (36%), Positives = 207/381 (54%)
Query: 575 ERPGAVLVFMTGWDDINSLKDQLQAHPLLGDPSRVLLLACHGSMASSEQRLIFDKPEDGV 634
++ G +L+F+ G +IN L++ L VL L H S+ + EQR +F P G
Sbjct: 885 QKSGGILIFLPGVAEINRACGMLRSLNCL----HVLPL--HASLETKEQRKVFVPPPSGK 938
Query: 635 RKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXX 694
RK+V+ATN+AETSITI+D++ V+D GK KETSYDA NN L ++ S
Sbjct: 939 RKVVVATNVAETSITIDDIIVVVDTGKVKETSYDAANNMRRLEETFASLAACKQRRGRAG 998
Query: 695 XVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPEP 754
VQ GECY LY R + A+ PE+ R PL+ LCL ++++ + + FL+RA PPE
Sbjct: 999 RVQAGECYKLYTRKLESQMAERPEPEMRRVPLEQLCLSVRAMGIADVRGFLARAPTPPEA 1058
Query: 755 LSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAG 814
+V+ AI L+ +G LD E LT LGR L+ +P + + GK+++ GA+F CL+ ++V A
Sbjct: 1059 AAVEGAITMLRRMGCLD-GEELTALGRQLAAIPADLRCGKLMVYGAVFGCLEDCVSVAAL 1117
Query: 815 LSV-RDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYE-----Y 868
LS R F+ P DK+D A A+A+F+A D D L +RA+ W R S + +
Sbjct: 1118 LSSGRGVFVSPPDKRDQAREARARFAAGD-GDLLTDLRAFQAWDAMMRDPSVQQRHVRSF 1176
Query: 869 CWKNFLSAQTLKAIDSLRKQFLFLLKDAGLV---DRNTEN-------CNKWSHDEHLIRA 918
C NFLS TL + S R Q+ L + GLV D N + ++L+RA
Sbjct: 1177 CDDNFLSYLTLSDVASARTQYFTSLVELGLVRPGDAGYSNRGPPPSTSEGGASSKYLLRA 1236
Query: 919 VICAGLFPGLCSVVNKEKSIA 939
+ + P + + +K A
Sbjct: 1237 LTASAFAPQIARIQYPDKKFA 1257
Score = 393 (143.4 bits), Expect = 2.2e-88, Sum P(3) = 2.2e-88
Identities = 85/225 (37%), Positives = 135/225 (60%)
Query: 282 QESPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEA 341
QE+PE +KML R+ LP++ RD +++ ++E+QV +++GETG GK+TQ Q+IL+
Sbjct: 618 QETPEYRKMLGQRQKLPAWLLRDEIVRTVAEHQVTIIAGETGSGKSTQSVQFILDDLYGR 677
Query: 342 ARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGI 401
G A +I+ TQPRRISA+ +++RV+ ER ++G+ VGY +R E G TR+ F TTG+
Sbjct: 678 GLGHAANILVTQPRRISALGLADRVSDERCSQVGQEVGYIIRGESRTGPKTRITFVTTGV 737
Query: 402 XXXXXXXX--------XXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMS 453
V+HV++DE+HER ++ DFLL + MS
Sbjct: 738 LLRRLQVSGGRVEDVVASLADVSHVVIDEVHERSLDTDFLLSIIRDVLKQRRDLKLVLMS 797
Query: 454 ATLNAELFSSYF--GGAPM--LHIPGFTYPVRAYFLENILEMTRY 494
ATL++ F+SYF G + + I G T+PV Y+L++++ MT++
Sbjct: 798 ATLDSATFASYFVQDGIRVGQVEIAGRTFPVTDYYLDDVIRMTQF 842
Score = 58 (25.5 bits), Expect = 2.2e-88, Sum P(3) = 2.2e-88
Identities = 22/80 (27%), Positives = 36/80 (45%)
Query: 922 AGLFPGLCSVVNKEKSIALKTMEDGQVLLYSNSV---NAGVPKIPYPWLVFNEKIKVNSV 978
A G + + K+I E+G+V ++ +S + G +L + I + V
Sbjct: 1257 AASMSGAVEIDPEAKTIRYYNQENGRVFVHPSSTLFDSQGFSGNA-AFLSYFSIISTSKV 1315
Query: 979 FLRDSTGVSDSVLLLFGGNI 998
F+RD T + LLLF G I
Sbjct: 1316 FVRDLTPFNAYTLLLFAGAI 1335
Score = 40 (19.1 bits), Expect = 2.1e-51, Sum P(3) = 2.1e-51
Identities = 13/38 (34%), Positives = 16/38 (42%)
Query: 525 SSIASAVEDALEAADFREYSVQTQQSLSCWNPDSIGFN 562
SS AS + L + R Q + WNPDS N
Sbjct: 576 SSAASEDKTTL-STQIRARRKQRRPKNIVWNPDSASKN 612
>CGD|CAL0005664 [details] [associations]
symbol:orf19.6818 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 569 (205.4 bits), Expect = 1.8e-85, Sum P(4) = 1.8e-85
Identities = 130/380 (34%), Positives = 212/380 (55%)
Query: 558 SIGFNLIEHVLCHIVKK-----ERPGAVLVFMTGWDDINSLKDQLQAHPLLGDPSRVLLL 612
++ + LI HV I K+ ++ G++L+F+ G +I+S ++ ++ + L
Sbjct: 796 NLNYELIAHVTRFIDKRLTQEAKQDGSILIFLPGVLEISSTIKEINK----SSDNKFMAL 851
Query: 613 ACHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNN 672
H + S+EQ+ IF G RK+V++TN+AETSITI D V VID GK+K +D N
Sbjct: 852 PLHSGLTSAEQKSIFKTAPKGKRKVVVSTNIAETSITIPDCVAVIDTGKSKNLFFDHKLN 911
Query: 673 TPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQ 732
T L+ SW S+ V G CYHLY + ++A +PE+ RT L++L L
Sbjct: 912 TTKLIESWCSQAEVRQRRGRAGRVTAGTCYHLYTKETFEAMQKQPIPEIKRTRLENLYLV 971
Query: 733 IKSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKL 792
+KS+ + +++EFLS L P+ S+ A ++L IGAL EN +LT LG +S LP +P+
Sbjct: 972 VKSMGISNVNEFLSSGLDAPDKSSLDKANQFLHEIGALQEN-SLTKLGNYISYLPTDPQS 1030
Query: 793 GKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRA 852
K+LILG IF CLD +T+ A S PF+ ++++D + + +F D +++ A
Sbjct: 1031 AKLLILGCIFGCLDICLTLAAISSTGSPFINSYEQRDKLKQIQKKFG-NGQGDFISMANA 1089
Query: 853 YDGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTEN-CNKWSH 911
Y+ + + + + +N+LS T+K I S R Q+L LL + G V+R ++ CNK +
Sbjct: 1090 YNAYMSNKSKR----FLTENYLSYTTIKDITSTRSQYLSLLVELGFVNRKLDDSCNKNAE 1145
Query: 912 DEHLIRAVICAGLFPGLCSV 931
+ LIR +I +P + +
Sbjct: 1146 NWPLIRGIIAGAFYPQVARI 1165
Score = 360 (131.8 bits), Expect = 1.8e-85, Sum P(4) = 1.8e-85
Identities = 74/225 (32%), Positives = 135/225 (60%)
Query: 276 EKQQAWQESPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYIL 335
E + + S E ++ML R LP++ ++++L+ AI+ QV +++GETG GK+TQ+ Q+I+
Sbjct: 552 ESYKKRKHSDEFKEMLIQRSKLPAFAKQESLMTAINSGQVTLITGETGSGKSTQVVQFIM 611
Query: 336 ESETEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLM 395
+ + + IICTQPRR+SA+++++R++ ER +++G GY +R E +TR+
Sbjct: 612 D-DLYSKGDFTTKIICTQPRRLSAVSLADRISKERVDEVGSETGYIIRGENKTSSNTRIT 670
Query: 396 FCTTGIXXXXXXXXXXXX---GVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXM 452
F TTG+ + ++++DE+HER ++ DFLLI+ +
Sbjct: 671 FATTGVLLRMLQSSKKNGVLKNIGYILIDEVHERSVDADFLLILLKKMIKSMPKLKIILL 730
Query: 453 SATLNAELFSSYFGGAPM--LHIPGFTYPVRAYFLENILEMTRYR 495
SAT++ + F ++F P+ LHI G TYP++ ++L++IL + Y+
Sbjct: 731 SATISVDTFINFFE-KPLTPLHIEGRTYPIQDFYLDSILAESEYK 774
Score = 56 (24.8 bits), Expect = 1.8e-85, Sum P(4) = 1.8e-85
Identities = 17/73 (23%), Positives = 32/73 (43%)
Query: 928 LCSVVNKEKSIALKTMEDGQVLLYSNSVNAGVPKI-PYPWLVFNEKIKVNSVFLRDSTGV 986
L V + SI + + + L + + + VP + ++ + +++RD T
Sbjct: 1230 LSKVSTDDGSIDYEKAREQYMQLAAQTPKSNVPMLLKDAFVAYRSSHHTTKLYVRDLTPT 1289
Query: 987 SDSVLLLFGGNIS 999
S LLFGG+ S
Sbjct: 1290 STFATLLFGGDFS 1302
Score = 46 (21.3 bits), Expect = 1.3e-27, Sum P(3) = 1.3e-27
Identities = 21/67 (31%), Positives = 31/67 (46%)
Query: 842 DYSDHLALVRAYDGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDR 901
+Y D L+ V DG D E+ + Y L+AQT K+ LLKDA + R
Sbjct: 1225 NYKDFLSKVSTDDGSIDYEKAREQYMQ-----LAAQTPKS------NVPMLLKDAFVAYR 1273
Query: 902 NTENCNK 908
++ + K
Sbjct: 1274 SSHHTTK 1280
Score = 43 (20.2 bits), Expect = 1.8e-85, Sum P(4) = 1.8e-85
Identities = 24/90 (26%), Positives = 39/90 (43%)
Query: 209 LPFGLLR-EVDAHLKAYLSQKY-INASMSSLSNVGSTTNDEGL--YEQQEQLVQNSVVR- 263
LP ++ + D+ ++ +SQ + M ++N G DE L Y + V
Sbjct: 331 LPQSFVKTDKDSKVQLKISQNLEMEYLMKRMANSGFD-QDEILEVYNANNNDEHKTCVEL 389
Query: 264 -ERILRQ--RSLQMHEKQQAWQESPEGQKM 290
+ +L Q SL E Q+ W E EG +M
Sbjct: 390 TKMLLPQPLESLAEPESQEIWNEEIEGLEM 419
>UNIPROTKB|Q5ADM3 [details] [associations]
symbol:CaO19.14110 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 569 (205.4 bits), Expect = 1.8e-85, Sum P(4) = 1.8e-85
Identities = 130/380 (34%), Positives = 212/380 (55%)
Query: 558 SIGFNLIEHVLCHIVKK-----ERPGAVLVFMTGWDDINSLKDQLQAHPLLGDPSRVLLL 612
++ + LI HV I K+ ++ G++L+F+ G +I+S ++ ++ + L
Sbjct: 796 NLNYELIAHVTRFIDKRLTQEAKQDGSILIFLPGVLEISSTIKEINK----SSDNKFMAL 851
Query: 613 ACHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNN 672
H + S+EQ+ IF G RK+V++TN+AETSITI D V VID GK+K +D N
Sbjct: 852 PLHSGLTSAEQKSIFKTAPKGKRKVVVSTNIAETSITIPDCVAVIDTGKSKNLFFDHKLN 911
Query: 673 TPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQ 732
T L+ SW S+ V G CYHLY + ++A +PE+ RT L++L L
Sbjct: 912 TTKLIESWCSQAEVRQRRGRAGRVTAGTCYHLYTKETFEAMQKQPIPEIKRTRLENLYLV 971
Query: 733 IKSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKL 792
+KS+ + +++EFLS L P+ S+ A ++L IGAL EN +LT LG +S LP +P+
Sbjct: 972 VKSMGISNVNEFLSSGLDAPDKSSLDKANQFLHEIGALQEN-SLTKLGNYISYLPTDPQS 1030
Query: 793 GKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRA 852
K+LILG IF CLD +T+ A S PF+ ++++D + + +F D +++ A
Sbjct: 1031 AKLLILGCIFGCLDICLTLAAISSTGSPFINSYEQRDKLKQIQKKFG-NGQGDFISMANA 1089
Query: 853 YDGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTEN-CNKWSH 911
Y+ + + + + +N+LS T+K I S R Q+L LL + G V+R ++ CNK +
Sbjct: 1090 YNAYMSNKSKR----FLTENYLSYTTIKDITSTRSQYLSLLVELGFVNRKLDDSCNKNAE 1145
Query: 912 DEHLIRAVICAGLFPGLCSV 931
+ LIR +I +P + +
Sbjct: 1146 NWPLIRGIIAGAFYPQVARI 1165
Score = 360 (131.8 bits), Expect = 1.8e-85, Sum P(4) = 1.8e-85
Identities = 74/225 (32%), Positives = 135/225 (60%)
Query: 276 EKQQAWQESPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYIL 335
E + + S E ++ML R LP++ ++++L+ AI+ QV +++GETG GK+TQ+ Q+I+
Sbjct: 552 ESYKKRKHSDEFKEMLIQRSKLPAFAKQESLMTAINSGQVTLITGETGSGKSTQVVQFIM 611
Query: 336 ESETEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLM 395
+ + + IICTQPRR+SA+++++R++ ER +++G GY +R E +TR+
Sbjct: 612 D-DLYSKGDFTTKIICTQPRRLSAVSLADRISKERVDEVGSETGYIIRGENKTSSNTRIT 670
Query: 396 FCTTGIXXXXXXXXXXXX---GVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXM 452
F TTG+ + ++++DE+HER ++ DFLLI+ +
Sbjct: 671 FATTGVLLRMLQSSKKNGVLKNIGYILIDEVHERSVDADFLLILLKKMIKSMPKLKIILL 730
Query: 453 SATLNAELFSSYFGGAPM--LHIPGFTYPVRAYFLENILEMTRYR 495
SAT++ + F ++F P+ LHI G TYP++ ++L++IL + Y+
Sbjct: 731 SATISVDTFINFFE-KPLTPLHIEGRTYPIQDFYLDSILAESEYK 774
Score = 56 (24.8 bits), Expect = 1.8e-85, Sum P(4) = 1.8e-85
Identities = 17/73 (23%), Positives = 32/73 (43%)
Query: 928 LCSVVNKEKSIALKTMEDGQVLLYSNSVNAGVPKI-PYPWLVFNEKIKVNSVFLRDSTGV 986
L V + SI + + + L + + + VP + ++ + +++RD T
Sbjct: 1230 LSKVSTDDGSIDYEKAREQYMQLAAQTPKSNVPMLLKDAFVAYRSSHHTTKLYVRDLTPT 1289
Query: 987 SDSVLLLFGGNIS 999
S LLFGG+ S
Sbjct: 1290 STFATLLFGGDFS 1302
Score = 46 (21.3 bits), Expect = 1.3e-27, Sum P(3) = 1.3e-27
Identities = 21/67 (31%), Positives = 31/67 (46%)
Query: 842 DYSDHLALVRAYDGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDR 901
+Y D L+ V DG D E+ + Y L+AQT K+ LLKDA + R
Sbjct: 1225 NYKDFLSKVSTDDGSIDYEKAREQYMQ-----LAAQTPKS------NVPMLLKDAFVAYR 1273
Query: 902 NTENCNK 908
++ + K
Sbjct: 1274 SSHHTTK 1280
Score = 43 (20.2 bits), Expect = 1.8e-85, Sum P(4) = 1.8e-85
Identities = 24/90 (26%), Positives = 39/90 (43%)
Query: 209 LPFGLLR-EVDAHLKAYLSQKY-INASMSSLSNVGSTTNDEGL--YEQQEQLVQNSVVR- 263
LP ++ + D+ ++ +SQ + M ++N G DE L Y + V
Sbjct: 331 LPQSFVKTDKDSKVQLKISQNLEMEYLMKRMANSGFD-QDEILEVYNANNNDEHKTCVEL 389
Query: 264 -ERILRQ--RSLQMHEKQQAWQESPEGQKM 290
+ +L Q SL E Q+ W E EG +M
Sbjct: 390 TKMLLPQPLESLAEPESQEIWNEEIEGLEM 419
>UNIPROTKB|F1RLG0 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR002110 InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS50088
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 OMA:RAFWESS EMBL:CU462841
Ensembl:ENSSSCT00000015529 Uniprot:F1RLG0
Length = 1151
Score = 708 (254.3 bits), Expect = 3.3e-85, Sum P(2) = 3.3e-85
Identities = 165/441 (37%), Positives = 256/441 (58%)
Query: 532 EDALEAADFREYSVQTQQSLSCWN----PDSIGFNLIEHVLCHIVKKERPGAVLVFMTGW 587
E +L + + S + ++ L ++ + + +LI H+L +I GAVL+F+ G+
Sbjct: 293 ESSLVQTNGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLYNICHSCDAGAVLIFLPGY 352
Query: 588 DDINSLKDQ-LQAHPLLGDP--SRVLLLACHGSMASSEQRLIFDKPEDGVRKIVLATNMA 644
D+I L+D+ L D SR + H +M +S+Q+ + P GVRKI+L+TN+A
Sbjct: 353 DEIVGLRDRILFDDKRFADNTHSRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIA 412
Query: 645 ETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXXXVQPGECYHL 704
ETSIT+NDVVFVID GK KE S+DALN L WISK +PG C+ L
Sbjct: 413 ETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRL 472
Query: 705 YPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGS--ISEFLSRALQPPEPLSVKNAIE 762
+ R + ++Q PELLR PLQ LCL K L + I++FL +A +PP L V+NA++
Sbjct: 473 FSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCPIADFLMKAPEPPPALIVRNAVQ 532
Query: 763 YLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFL 822
L+ I A+D E+LT LG +L+ LPVEP LGKM++ + CLDP++T+ L+ RDPF+
Sbjct: 533 MLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFV 592
Query: 823 MPFD--KKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYE--YCWKNFLSAQT 878
+P +K A + +F+A +SDH+AL+RA+ W+ A G+E +C KNFLS T
Sbjct: 593 LPTQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQKAR--SDGWERAFCEKNFLSQAT 650
Query: 879 LKAIDSLRKQFLFLLKDAGLVDR----NTENCNKWSHDEHLIRAVICAGLFPGLCSVVNK 934
++ I +R Q L L+ +G V + + N S + +++A + AG++P L V ++
Sbjct: 651 MEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVKAALVAGMYPNLVHV-DR 709
Query: 935 EKSIALKTMEDGQVLLYSNSV 955
E ++ L ++ +V + SV
Sbjct: 710 E-NVVLTGPKEKKVRFHPTSV 729
Score = 178 (67.7 bits), Expect = 3.3e-85, Sum P(2) = 3.3e-85
Identities = 45/127 (35%), Positives = 61/127 (48%)
Query: 392 TRLMFCTTGIXXXXXXXXXXXXG-VTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXX 450
T L FCT G+ VTHVIVDE+HER DFLL
Sbjct: 6 TLLTFCTNGVLLRTLMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLI 65
Query: 451 XMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYFLENILEMTRYRLNTYNQIDDYGQEKS 510
SA L+ LF YFG P+++I G + V+ FLE+IL T Y T ++ Y +EK
Sbjct: 66 LSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMFLEDILRTTGY---TNKEMLKYKKEKQ 122
Query: 511 WKMQKQA 517
+ ++Q+
Sbjct: 123 REEKQQS 129
Score = 78 (32.5 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 33/158 (20%), Positives = 65/158 (41%)
Query: 854 DGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLV-DRNTENCNKWSHD 912
DGW+ A ++ + + + LR + G + D NT N W+
Sbjct: 634 DGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNT-NSENWA-- 690
Query: 913 EHLIRAVICAGLFPGLCSVVN--------KEKSIAL---KTMEDGQV--LLYSNSVNAGV 959
+++A + AG++P L V KEK + + Q + +N A +
Sbjct: 691 --VVKAALVAGMYPNLVHVDRENVVLTGPKEKKVRFHPTSVLSQPQYKKIPPANGQAAAI 748
Query: 960 PKIPYPWLVFNEKIKVNSVF-LRDSTGVSDSVLLLFGG 996
+P WL+++E + + + +R + V+ +L+F G
Sbjct: 749 QALPTDWLIYDEMTRAHRIANIRCCSAVTPVTVLVFCG 786
>UNIPROTKB|H7C109 [details] [associations]
symbol:DHX57 "Putative ATP-dependent RNA helicase DHX57"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 EMBL:AC018693 InterPro:IPR011709 Pfam:PF07717
HGNC:HGNC:20086 ChiTaRS:DHX57 Ensembl:ENST00000452978
Uniprot:H7C109
Length = 665
Score = 704 (252.9 bits), Expect = 1.7e-84, Sum P(2) = 1.7e-84
Identities = 172/470 (36%), Positives = 269/470 (57%)
Query: 538 ADFREYSVQTQQSLSCWNPDSIGFNLIEHVLCHIVKKER---PGAVLVFMTGWDDINSLK 594
A ++ S +++S + + + LIE +L IV + PGA+LVF+ G +I L
Sbjct: 129 ARYKGVSKSVIKTMSIMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLY 188
Query: 595 DQLQAHPLLGD--PSRVLLLACHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITIND 652
+QLQ++ L + +R ++ H S++S EQ+ +F KP GV KI+++TN+AETSITI+D
Sbjct: 189 EQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDD 248
Query: 653 VVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYD- 711
VV+VID GK KE YDA L +++S+ V G C+HL+ + Y+
Sbjct: 249 VVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNH 308
Query: 712 AFADYQLPELLRTPLQSLCLQIKSLQLGS---ISEFLSRALQPPEPLSVKNAIEYLQIIG 768
QLPE+ R PL+ LCL+IK L++ S + SR ++PP S++ + L+ +G
Sbjct: 309 QLLKQQLPEIQRVPLEQLCLRIKILEMFSAHNLQSVFSRLIEPPHTDSLRASKIRLRDLG 368
Query: 769 ALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKK 828
AL +E LT LG +L+ LPV+ ++GK+++ G+IF CLDP +T+ A L+ + PF+ P+DKK
Sbjct: 369 ALTPDERLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPWDKK 428
Query: 829 DLAESAKAQFSARDYSDHLALVRAYDGWKDAERH--QSGYEYCWKNFLSAQTLKAIDSLR 886
+ A K +F+ + SD+LAL++AY GW+ + + ++ Y YC +NFLS + L+ + SL+
Sbjct: 429 EEANQKKLEFAFAN-SDYLALLQAYKGWQLSTKEGVRASYNYCRQNFLSGRVLQEMASLK 487
Query: 887 KQFLFLLKDAGLVDRNTENCNKWSHDEHLIRAVICAGLFPGLCSVVNKEKSIALKTMEDG 946
+QF LL D G R + V+ A G + N E + M
Sbjct: 488 RQFTELLSDIGFA-REGLRAREIEKRAQGGDGVLDA---TGEEANSNAENPKLISAMLCA 543
Query: 947 QVLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVSDSVLLLFGG 996
LY N V V P+L+++EKIK + VF+RD + VS L+LFGG
Sbjct: 544 A--LYPNVVQ--VRHFDSPYLLYHEKIKTSRVFIRDCSMVSVYPLVLFGG 589
Score = 161 (61.7 bits), Expect = 1.7e-84, Sum P(2) = 1.7e-84
Identities = 40/104 (38%), Positives = 55/104 (52%)
Query: 431 DFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYFLENILE 490
DFLL+V MSATLNAELFS YF P++ IPG T+PV +FLE+ +
Sbjct: 2 DFLLLVLKDIVSQRPGLQVILMSATLNAELFSDYFNSCPVITIPGRTFPVDQFFLEDAIA 61
Query: 491 MTRYRLNTYNQIDDYGQEKSWK-MQKQALALRKRKSSIASAVED 533
+TRY L D +S K + K+ L R+ +++ ED
Sbjct: 62 VTRYVLQ-----DGSPYMRSMKQISKEKLKARRNRTAFEEVEED 100
Score = 40 (19.1 bits), Expect = 9.7e-72, Sum P(2) = 9.7e-72
Identities = 12/55 (21%), Positives = 25/55 (45%)
Query: 258 QNSVVRERILRQRSLQMHEKQQAWQESPEGQKMLEFRRSLPSYKE-RDALLKAIS 311
+N E + L +H + Q + + L+F++ L YK +++K +S
Sbjct: 89 RNRTAFEEVEEDLRLSLHLQDQDSVKDAVPDQQLDFKQLLARYKGVSKSVIKTMS 143
Score = 39 (18.8 bits), Expect = 1.2e-71, Sum P(2) = 1.2e-71
Identities = 16/66 (24%), Positives = 25/66 (37%)
Query: 103 RYAYQDESSDDSDREFGSTQQQMCGSTLDNIDEWRWKLTMLLRNKDEQEVVSRAKKDRRD 162
RY QD S + S ++ +E L + L +D+ V + D
Sbjct: 64 RYVLQDGSPYMRSMKQISKEKLKARRNRTAFEEVEEDLRLSLHLQDQDSVKDAVPDQQLD 123
Query: 163 FEQLSA 168
F+QL A
Sbjct: 124 FKQLLA 129
>ZFIN|ZDB-GENE-061207-30 [details] [associations]
symbol:dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide
34" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IMP] [GO:0009790 "embryo
development" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR015880
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-061207-30 GO:GO:0005524
GO:GO:0000184 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
GO:GO:0009790 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
CTD:9704 HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 EMBL:BX908775
IPI:IPI00503372 RefSeq:NP_001121805.1 UniGene:Dr.50626
Ensembl:ENSDART00000086943 GeneID:555838 KEGG:dre:555838
InParanoid:A2BIE5 NextBio:20881188 Uniprot:A2BIE5
Length = 1150
Score = 549 (198.3 bits), Expect = 1.2e-82, Sum P(3) = 1.2e-82
Identities = 121/332 (36%), Positives = 191/332 (57%)
Query: 574 KERPGAVLVFMTGWDDINSLKDQLQAHPLLGDPSRVLLLACHGSMASSEQRLIFDKPEDG 633
+E G +L+F++G +I+++++ Q + R ++L H +++ ++Q +FD G
Sbjct: 375 QEERGDLLLFLSGVAEISTIQEACQTYAT--HTQRWIVLPLHSTLSLAQQDKVFDIAPPG 432
Query: 634 VRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXX 693
VRK +++TN+AETS+TI+ V FV+D GK KE S+D L WIS+
Sbjct: 433 VRKCIISTNIAETSVTIDGVRFVVDSGKVKEMSFDPKAKMQRLQEFWISRASSEQRKGRA 492
Query: 694 XXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPE 753
PG CY LY YDAFA Y +PE+ R L SL LQ+KS+ LG F + PP
Sbjct: 493 GRTGPGVCYRLYSESDYDAFAPYPVPEIHRVALDSLILQMKSMGLGDPRTFTF--IDPPP 550
Query: 754 PLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVA 813
S++ A+ YL+ GALDE+ LT +GR L+ LPV+ +GKML+LG++FN ++PV+TV A
Sbjct: 551 ASSIQTAVTYLREQGALDEHGELTSIGRLLAQLPVDVVIGKMLVLGSVFNLVEPVLTVAA 610
Query: 814 GLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKD--AERHQSGYEYCWK 871
LSV+ PFL +A+ ++ ++ D L+ ++ W A+R ++C +
Sbjct: 611 ALSVQSPFLRSAQHNPDCSTARQPLNS-NHGDPFTLMNTFNAWVQVKADRGSGSRKWCRR 669
Query: 872 NFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNT 903
L Q L + +LR+QF LL+ GL++ +T
Sbjct: 670 RGLEEQRLYEMVNLRRQFKELLRSHGLLEDDT 701
Score = 355 (130.0 bits), Expect = 1.2e-82, Sum P(3) = 1.2e-82
Identities = 99/335 (29%), Positives = 161/335 (48%)
Query: 155 RAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNYRSDLDEKRPQREVILPFGLL 214
RA+ D F Q + H ++ F + R ++ V L G
Sbjct: 19 RAQLDEVFFRQHDYIQAGSAEHKEFWSFFERFQSFKAKKEMTASKSSRQEKHVALREGKA 78
Query: 215 RE----VDAHL-KAYLSQKYINASMSSLSNVGSTTNDEGLYEQQEQLVQNSVVRERILRQ 269
++ VD L K Y ++ IN S+ S + + + + R+
Sbjct: 79 KKKTGCVDLGLPKDYDARYRINISVCSRDIEERLAGSDHRRRESSGPGRQEITDGRLALL 138
Query: 270 RSLQMHEKQQAWQESPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQ 329
L ++KQ + S K+ ++SLP ++ RD +++ + + VVVV+G+TGCGK+TQ
Sbjct: 139 HFLDFNQKQSFSKLS----KLRREQKSLPIFQYRDKIVELVRTHPVVVVAGDTGCGKSTQ 194
Query: 330 LPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKG 389
+PQY+L S +I CTQPRRI+ +++++RV+ E + G VGY++R E +
Sbjct: 195 VPQYLLASGIN-------NIACTQPRRIACISLAKRVSFESLNQYGSKVGYQIRFETSRT 247
Query: 390 RDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXX 449
T+L+F T G+ +IVDE+HER ++ DFLL V
Sbjct: 248 LATKLLFLTEGLLLRQIQQDASLGQYQVLIVDEVHERHLHCDFLLGVLRSLLSLRPDLRL 307
Query: 450 XXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYF 484
MSAT+N +LFSSYF AP+L +PG +P++ +
Sbjct: 308 VLMSATINIKLFSSYFNDAPVLQVPGRLFPIQVIY 342
Score = 52 (23.4 bits), Expect = 1.2e-82, Sum P(3) = 1.2e-82
Identities = 14/58 (24%), Positives = 27/58 (46%)
Query: 910 SHDEHLIRAVICAGLFPGLC-----SVVNKEKSIALKTMEDGQVLLYSNSVNAGVPKI 962
S + L++ ++C GL+P L + K+ T V+++ SV A P++
Sbjct: 803 SLQQALLKLLLCRGLYPQLAIPDEHNATRKDSDQVFHTRNKQGVVIHPTSVFASDPEV 860
>POMBASE|SPBC16H5.10c [details] [associations]
symbol:prp43 "ATP-dependent RNA helicase Prp43
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000390
"spliceosomal complex disassembly" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO;ISS] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=ISO] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0030686 "90S preribosome"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC16H5.10c GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 GO:GO:0000390 KO:K12820 OMA:TVLQIHA
EMBL:AB027819 PIR:T39615 RefSeq:NP_595937.1
ProteinModelPortal:O42945 IntAct:O42945 STRING:O42945
EnsemblFungi:SPBC16H5.10c.1 GeneID:2540057 KEGG:spo:SPBC16H5.10c
OrthoDB:EOG4S7NZ4 NextBio:20801194 Uniprot:O42945
Length = 735
Score = 507 (183.5 bits), Expect = 1.8e-82, Sum P(2) = 1.8e-82
Identities = 137/436 (31%), Positives = 226/436 (51%)
Query: 574 KERPGAVLVFMTGWDDINSL--KDQLQAHPLL--GDPSRVLLLACHGSMASSEQRLIFDK 629
+E PG +LVF+TG ++I K L+A L+ G + + +GS+ ++Q+ IF+
Sbjct: 282 EEGPGDILVFLTGEEEIEDACRKITLEADDLVREGAAGPLKVYPLYGSLPPNQQQRIFEP 341
Query: 630 -PED---GV-RKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKX 684
PED G RK+V++TN+AETS+TI+ +V+V+D G +K+ Y+ LL S ISK
Sbjct: 342 TPEDTKSGYGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKA 401
Query: 685 XXXXXXXXXXXVQPGECYHLYPRYVY-DAFADYQLPELLRTPLQSLCLQIKSLQLGSISE 743
+PG+C+ LY + + PE+LR+ L S L++K L + +
Sbjct: 402 SAQQRAGRAGRTRPGKCFRLYTEEAFRKELIEQTYPEILRSNLSSTVLELKKLGIDDLVH 461
Query: 744 FLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFN 803
F + PP P ++ A+E L + LD+N +LT LGR S P++P L MLI F
Sbjct: 462 F--DYMDPPAPETMMRALEELNYLNCLDDNGDLTPLGRKASEFPLDPNLAVMLIRSPEFY 519
Query: 804 CLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQ 863
C + V+++ A LSV + F+ P + LA+ + QF+ D DHL L+ Y +K E
Sbjct: 520 CSNEVLSLTALLSVPNVFVRPNSARKLADEMRQQFTHPD-GDHLTLLNVYHAYKSGE--- 575
Query: 864 SGYEYCWKNFLSAQTLKAIDSLRKQFLFLLK--DAGLVDRNTENCNKWSHDEHLIRAVIC 921
++CW +FLS + L + D++RKQ ++ + L+ ++ N + + IR +
Sbjct: 576 GTADWCWNHFLSHRALISADNVRKQLRRTMERQEVELISTPFDDKNYYVN----IRRALV 631
Query: 922 AGLFPGLCSVVNKEKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLR 981
+G F + K+ TM+D QV+ S + G+ P W+V+NE + F+R
Sbjct: 632 SGFFMQVAKKSANGKNYV--TMKDNQVV--SLHPSCGLSVTP-EWVVYNEFVLTTKSFIR 686
Query: 982 DSTGVSDSVLLLFGGN 997
+ T + L+ N
Sbjct: 687 NVTAIRPEWLIELAPN 702
Score = 387 (141.3 bits), Expect = 1.8e-82, Sum P(2) = 1.8e-82
Identities = 82/198 (41%), Positives = 112/198 (56%)
Query: 289 KMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACS 348
K+LE RR LP Y++R+ LK ENQ++V GETG GKTTQ+PQ++L E
Sbjct: 67 KILETRRELPVYQQREEFLKIYHENQIIVFVGETGSGKTTQIPQFVLYDELPHLTNT--Q 124
Query: 349 IICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXX 408
I CTQPRR++AM+V++RVA E LGE VGY +R E G +T L + T G+
Sbjct: 125 IACTQPRRVAAMSVAKRVADEMDVDLGEEVGYNIRFEDCSGPNTLLKYMTDGMLLREAMT 184
Query: 409 XXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGA 468
+ +I+DE HER + D L+ + MSATL+A+ F YF A
Sbjct: 185 DHMLSRYSCIILDEAHERTLATDILMGLMKRLATRRPDLKIIVMSATLDAKKFQKYFFDA 244
Query: 469 PMLHIPGFTYPVRAYFLE 486
P+L +PG TYPV Y+ +
Sbjct: 245 PLLAVPGRTYPVEIYYTQ 262
Score = 41 (19.5 bits), Expect = 4.9e-46, Sum P(2) = 4.9e-46
Identities = 11/50 (22%), Positives = 23/50 (46%)
Query: 145 RNKDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNY 194
R D + +V A D + F++ A + + R Y + +++ P +Y
Sbjct: 219 RRPDLKIIVMSATLDAKKFQKYFFDAPLLAVPGRTYPVEIYYTQEPERDY 268
>WB|WBGene00009922 [details] [associations]
symbol:F52B5.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00393 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0009792 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:Z75541
PIR:T22493 RefSeq:NP_492260.1 ProteinModelPortal:Q20644 SMR:Q20644
STRING:Q20644 PaxDb:Q20644 EnsemblMetazoa:F52B5.3 GeneID:172615
KEGG:cel:CELE_F52B5.3 UCSC:F52B5.3 CTD:172615 WormBase:F52B5.3
InParanoid:Q20644 OMA:NSMPETQ NextBio:876269 Uniprot:Q20644
Length = 1425
Score = 445 (161.7 bits), Expect = 7.2e-82, Sum P(3) = 7.2e-82
Identities = 113/340 (33%), Positives = 187/340 (55%)
Query: 215 REVDAHLKAYLSQKYINASMSSL-SNVGSTTNDEGLYEQQEQLVQNSVVRER----ILRQ 269
RE D ++ LS++ S S+L + T + E L + + + ++ + RE +
Sbjct: 89 REPDRYM--ILSKRVNRLSKSTLVATEPITPSFECLQKLSKFVEKHPITREEMDEFLTET 146
Query: 270 RSLQMH-------EKQQAWQESPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGET 322
++ QMH ++ +S +++ + R SLP+ K D +LK+IS VV++SG T
Sbjct: 147 QTKQMHTTKGHISDRMVIPPKSKCSKELQKVRNSLPASKYCDQVLKSISSCNVVIISGGT 206
Query: 323 GCGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKV 382
GCGKTTQ+PQ+IL+ E + ++ TQPRRI+A++++ERVA ERGE +G +VGY+V
Sbjct: 207 GCGKTTQVPQFILDEAHENNKHVR--VMVTQPRRIAAISIAERVARERGEPIGRTVGYQV 264
Query: 383 RLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXX 442
RL+ + DT L +CTTG+ G+TH+++DEIHER +N D+LLI
Sbjct: 265 RLDSRRSDDTVLTYCTTGVLLRMLTSDPVASGITHIVMDEIHEREINTDYLLIALRECLK 324
Query: 443 XXXXXXXXXMSATL--NAELFSSYFGGAPM--LHIPGFTYPVRAYFLENILEMTRYR--- 495
MSAT+ N +LFS+YF M + I + V+ ++L+ IL MT Y+
Sbjct: 325 MRPDLKVILMSATIEGNMQLFSNYFENHSMDVIRIESRAFDVKVFYLDQILAMTGYQPPE 384
Query: 496 LNTYNQIDDYGQEKSWKMQKQALALRKRKSSIASAVEDAL 535
+ +Y +E+ WK + +A+ ++ + A + +L
Sbjct: 385 SKAFFSTAEY-EEEDWKDEIEAVEREEKDKAKQRAADSSL 423
Score = 300 (110.7 bits), Expect = 7.2e-82, Sum P(3) = 7.2e-82
Identities = 84/268 (31%), Positives = 131/268 (48%)
Query: 508 EKSWKMQKQALALRKRKSSIASAVEDALEAADFREYSVQTQQSL--SCWNPDSIGFNLIE 565
EK +K + + AL R + D ++ DF + + +L + +S+ + L++
Sbjct: 574 EKKFKEELKT-ALPDRTVYYHPQMNDVVDKTDFSKLRFGEKYNLFYGSSSNNSVDYVLLD 632
Query: 566 HVLCHIVKKERPGAVLVFMTGWDDINSLKDQLQAHP-LLGDPSRVLLLACHGSMASSEQR 624
V+ ++ G +LVF+ G++DI + + L + V++L H M S
Sbjct: 633 QVIQYLADSPVFGTILVFLPGYEDIQQMLKAIDCWKNSLKNMKNVIVLPLHSQMTSINHG 692
Query: 625 LIFDK-PEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISK 683
IF P+D RKI+LATN+AE SITI DV+FV+D GK KE S+D L I++
Sbjct: 693 DIFKSVPKD-TRKIILATNIAEASITIEDVIFVVDTGKVKEKSFDHEAKLSTLTVKPIAR 751
Query: 684 XXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSL--QLGSI 741
V G C LY Y++ + Q+ E+ R + + L K + I
Sbjct: 752 SNADQRSGRAGRVANGYCIRLYTEQEYNSMPETQIAEMKRAAIYDVTLHAKLFAPKTLKI 811
Query: 742 SEFLSRALQPPEPLSVKNAIEYLQIIGA 769
SEFLS A +PPE S+ AI +L+ IGA
Sbjct: 812 SEFLSLAPEPPEKESILQAITFLEQIGA 839
Score = 219 (82.2 bits), Expect = 7.2e-82, Sum P(3) = 7.2e-82
Identities = 55/195 (28%), Positives = 104/195 (53%)
Query: 772 ENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDK-KDL 830
E+ LT LGR ++ LP++P+L +ML+ G CL P++ +VA L+ R+P+++ + +DL
Sbjct: 869 EDPELTDLGRLMARLPLDPQLSRMLLFGLALKCLTPIVNLVALLASREPYVLALSEDRDL 928
Query: 831 AESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFL 890
K + + +D SDHL +R + + Q ++C +FL+ T++ + R+Q L
Sbjct: 929 QSKMKFEMAQQDLSDHLLYIRLCNEFCSKNNSQQN-QFCRDHFLNFSTMRMVQGTRRQLL 987
Query: 891 FLLKDAGLVD----RNT------ENCNKWSHDEHLIRAVICAGLFPGLCSVVNKEKSIAL 940
L A L++ R+ + N++S +I+AVI AG +P + ++ +
Sbjct: 988 RELVRAKLINISPNRDVLTVLTDHHFNQFSQCWPMIQAVIAAGCYPFIGVSASESNLKKV 1047
Query: 941 KTMEDGQVLLYSNSV 955
+T D L+ +S+
Sbjct: 1048 QTFNDKPAFLHPSSM 1062
Score = 50 (22.7 bits), Expect = 1.1e-39, Sum P(3) = 1.1e-39
Identities = 31/135 (22%), Positives = 62/135 (45%)
Query: 147 KDEQEVVSRAKKD----RRDFEQLSALA---TRMGLHSRQYAKVVV--FSKAPLPNYRSD 197
KDE E V R +KD R LS L+ T+M ++++ + + ++ P D
Sbjct: 400 KDEIEAVEREEKDKAKQRAADSSLSTLSKPVTKMAANTKRNSPIEEREWTSGPCSTPDGD 459
Query: 198 LDEKRPQREVILPFGLLREVDAHLKAYLSQKYINASMSS--LSNVGSTTNDEGLYEQQEQ 255
+ ++R R+ + G + ++ ++ ++ + +S +++V TTN + +
Sbjct: 460 IIDERAMRQYMNIIG-----NPDIRPVITVEFRPTTPNSVFINDVKYTTNPN---QSAQA 511
Query: 256 LVQNSVVRERILRQR 270
L+Q RER L R
Sbjct: 512 LLQQK--RERCLMPR 524
Score = 45 (20.9 bits), Expect = 3.1e-37, Sum P(2) = 3.1e-37
Identities = 18/65 (27%), Positives = 28/65 (43%)
Query: 928 LCSVVNKEKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVS 987
+ +++ K+ LKT + + Y +N V K + L F EK N + S
Sbjct: 569 ISTLLEKKFKEELKTALPDRTVYYHPQMNDVVDKTDFSKLRFGEKY--NLFYGSSSNNSV 626
Query: 988 DSVLL 992
D VLL
Sbjct: 627 DYVLL 631
Score = 37 (18.1 bits), Expect = 3.4e-12, Sum P(3) = 3.4e-12
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 283 ESPEGQKMLEFRRSLPSYKERDALLKAI 310
+SP +L F LP Y++ +LKAI
Sbjct: 640 DSPVFGTILVF---LPGYEDIQQMLKAI 664
Score = 37 (18.1 bits), Expect = 5.6e-12, Sum P(2) = 5.6e-12
Identities = 12/45 (26%), Positives = 23/45 (51%)
Query: 216 EVDAHLKAYLSQKYINASMSSLSNVGSTTNDEGLYEQQEQLVQNS 260
E ++ L+A + I A + + ++ N+EGL +E +NS
Sbjct: 823 EKESILQAITFLEQIGAFYTPIKIYDNSGNEEGLKNDEE--AENS 865
>FB|FBgn0086895 [details] [associations]
symbol:pea "peanuts" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IC] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0007286 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0000381 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN EMBL:BT044222
RefSeq:NP_610928.1 UniGene:Dm.12451 SMR:A1Z9L3 STRING:A1Z9L3
EnsemblMetazoa:FBtr0087518 GeneID:36561 KEGG:dme:Dmel_CG8241
UCSC:CG8241-RA CTD:36561 FlyBase:FBgn0086895 InParanoid:A1Z9L3
OrthoDB:EOG437PVS GenomeRNAi:36561 NextBio:799212 Uniprot:A1Z9L3
Length = 1242
Score = 545 (196.9 bits), Expect = 6.1e-81, Sum P(2) = 6.1e-81
Identities = 137/447 (30%), Positives = 237/447 (53%)
Query: 557 DSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQL-QAHPLLG-DPSRVLLLAC 614
D + +LI + H+ +E PG +L+F+TG ++I++ + L + LG D +++L
Sbjct: 776 DYLDASLITVMQIHL--REPPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPV 833
Query: 615 HGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTP 674
+ ++ S Q IFD G RK+V+ATN+AETS+TI+ + +V+D G K+ Y++
Sbjct: 834 YSALPSEMQTRIFDPAPAGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMD 893
Query: 675 CLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVY-DAFADYQLPELLRTPLQSLCLQI 733
L+ + IS+ PG+ Y LY Y D +PE+ RT L + LQ+
Sbjct: 894 SLVVTPISQAAAKQRAGRAGRTGPGKTYRLYTERAYRDEMLPTPVPEIQRTNLATTVLQL 953
Query: 734 KSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLG 793
K++ + + F P E L + A+E L + ALD+ LT LGR ++ P+EP L
Sbjct: 954 KTMGINDLLHFDFMDAPPVESLVM--ALEQLHSLSALDDEGLLTRLGRRMAEFPLEPNLS 1011
Query: 794 KMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAY 853
KMLI+ C D ++T+V+ LSV++ F P DK+ LA+ KA+F+ + DHL L+ Y
Sbjct: 1012 KMLIMSVALQCSDEILTIVSMLSVQNVFYRPKDKQALADQKKAKFNQAE-GDHLTLLAVY 1070
Query: 854 DGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDE 913
+ WK+ ++ +C++NF+ +TLK +RKQ L G++DR+ + +
Sbjct: 1071 NSWKN---NKFSNAWCYENFVQIRTLKRSQDVRKQLL------GIMDRHKLDVVSAGKNS 1121
Query: 914 HLIRAVICAGLFPGLCSVVNKEKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFNEKI 973
I+ IC+G F + K+ +T+ D QV+ Y + +A + P W++++E +
Sbjct: 1122 VRIQKAICSGFFR---NAAKKDPQEGYRTLVDSQVV-YIHPSSALFNRQP-EWVIYHELV 1176
Query: 974 KVNSVFLRDSTGVSDSVLLLFGGNISR 1000
+ ++R+ T + L+ F + R
Sbjct: 1177 QTTKEYMREVTTIDPKWLVEFAPSFFR 1203
Score = 352 (129.0 bits), Expect = 6.1e-81, Sum P(2) = 6.1e-81
Identities = 79/195 (40%), Positives = 114/195 (58%)
Query: 290 MLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSI 349
++E R+SLP YK RD L+KA+++NQ+++V GETG GKTTQ+ QY+ E ARG I
Sbjct: 579 LVEQRQSLPIYKLRDDLIKAVTDNQILIVIGETGSGKTTQITQYLGECGF-TARG---KI 634
Query: 350 ICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXX 409
CTQPRR++AM+V++RVA E G +LG+ VGY +R E +T + + T G+
Sbjct: 635 GCTQPRRVAAMSVAKRVAEEYGCRLGQEVGYTIRFEDCTSPETIIKYMTDGMLLRECLME 694
Query: 410 XXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAP 469
+ +++DE HER ++ D L + SATL+A FS YF AP
Sbjct: 695 AELKSYSVIMLDEAHERTIHTDVLFGLLKTAVQKRPELKLIVTSATLDAVKFSQYFFKAP 754
Query: 470 MLHIPGFTYPVRAYF 484
+ IPG T+PV +
Sbjct: 755 IFTIPGRTFPVEVLY 769
Score = 38 (18.4 bits), Expect = 7.2e-48, Sum P(2) = 7.2e-48
Identities = 12/54 (22%), Positives = 24/54 (44%)
Query: 141 TMLLRNKDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNY 194
T + + + + +V+ A D F Q A + R + V+++K P +Y
Sbjct: 724 TAVQKRPELKLIVTSATLDAVKFSQYFFKAPIFTIPGRTFPVEVLYTKEPETDY 777
>MGI|MGI:1918973 [details] [associations]
symbol:Dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide 34"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00355 SMART:SM00490 SMART:SM00847
MGI:MGI:1918973 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
CTD:9704 HOGENOM:HOG000232193 ChiTaRS:DHX34 EMBL:AK129062
EMBL:AK004733 IPI:IPI00113303 RefSeq:NP_082159.3 UniGene:Mm.75259
ProteinModelPortal:Q9DBV3 SMR:Q9DBV3 PhosphoSite:Q9DBV3
PaxDb:Q9DBV3 PRIDE:Q9DBV3 Ensembl:ENSMUST00000094816
Ensembl:ENSMUST00000163968 GeneID:71723 KEGG:mmu:71723
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 NextBio:334335
Bgee:Q9DBV3 CleanEx:MM_DHX34 Genevestigator:Q9DBV3
GermOnline:ENSMUSG00000006019 Uniprot:Q9DBV3
Length = 1145
Score = 547 (197.6 bits), Expect = 3.4e-80, Sum P(2) = 3.4e-80
Identities = 125/327 (38%), Positives = 184/327 (56%)
Query: 575 ERPGAVLVFMTGWDDINSLKDQLQAHPLLGDPSRVLLLACHGSMASSEQRLIFDKPEDGV 634
E G +LVF++G +I ++ D QA+ L R ++L H +++ S+Q +FD GV
Sbjct: 378 EERGDLLVFLSGMAEITTVLDAAQAYASL--TQRWVVLPLHSALSVSDQDKVFDVAPAGV 435
Query: 635 RKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXX 694
RK +L+TN+AETS+TI+ + FV+D GK KE SYD L WIS+
Sbjct: 436 RKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAG 495
Query: 695 XVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPEP 754
PG CY LY YDAFA Y +PE+ R L +L LQ+KS+ +G F ++PP P
Sbjct: 496 RTGPGVCYRLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTF--PFIEPPPP 553
Query: 755 LSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAG 814
SV+ AI YLQ GALD +E LT +G L+ LPV+ +GKMLILG++F+ +PV+T+ A
Sbjct: 554 ASVETAILYLQEQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLAEPVLTIAAA 613
Query: 815 LSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGY--EYCWKN 872
LSV+ PF +A+ + D D L ++ W + +SG ++C +
Sbjct: 614 LSVQSPFTRSAQSNLDCATARRPLES-DQGDPFTLFNVFNAWVQVKSERSGNSRKWCRRR 672
Query: 873 FLSAQTLKAIDSLRKQFLFLLKDAGLV 899
+ L + +LR+QF LL+D GL+
Sbjct: 673 GVEEHRLYEMANLRRQFKELLEDHGLL 699
Score = 341 (125.1 bits), Expect = 3.4e-80, Sum P(2) = 3.4e-80
Identities = 79/222 (35%), Positives = 121/222 (54%)
Query: 264 ERILRQRSLQMHEKQ-QAWQESPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGET 322
ER+ R +H Q Q K+ R +LP + + +L+ + E+QVVVV+G+T
Sbjct: 130 ERVSEFRRALLHYLDFQQKQAFGRLAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDT 189
Query: 323 GCGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKV 382
GCGK+TQ+PQY+L A G + + CTQPRRI+ +++++RV E + G VGY++
Sbjct: 190 GCGKSTQVPQYLL------AAGFS-HVACTQPRRIACISLAKRVGFESLSQYGSQVGYQI 242
Query: 383 RLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXX 442
R E + T+++F T G+ +IVDE+HER ++ DFLL V
Sbjct: 243 RFESTRSAATKIVFLTVGLLLRQIQREPSLPQYQVLIVDEVHERHLHNDFLLGVLQRLLP 302
Query: 443 XXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYF 484
MSAT+N LFSSYF AP++ +PG +P+ +
Sbjct: 303 QRPDLKVILMSATINISLFSSYFSHAPVVQVPGRLFPITVVY 344
>FB|FBgn0030833 [details] [associations]
symbol:CG8915 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014298 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00680000101018 FlyBase:FBgn0030833 EMBL:BT133099
RefSeq:NP_573208.1 SMR:Q9VX63 IntAct:Q9VX63 MINT:MINT-762262
EnsemblMetazoa:FBtr0074447 GeneID:32715 KEGG:dme:Dmel_CG8915
UCSC:CG8915-RA InParanoid:Q9VX63 OMA:WISQADA GenomeRNAi:32715
NextBio:779983 Uniprot:Q9VX63
Length = 976
Score = 486 (176.1 bits), Expect = 1.1e-79, Sum P(2) = 1.1e-79
Identities = 136/455 (29%), Positives = 239/455 (52%)
Query: 555 NPDSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQLQAHPLLGDPSRVLLLAC 614
+PD I +LI +L ++++ GAV+V++ G+ D+ SL +L++ L + ++LL
Sbjct: 439 HPD-IDNDLIVSLLELLLRQGDAGAVIVYLPGYSDMTSLLARLESS-LPREQITIILL-- 494
Query: 615 HGSMASSEQRLIFDKPEDGVR-KIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNT 673
H + +SEQR +F + GVR KI+L+TN+ +TSITI D+++VID G AK +YD+ +
Sbjct: 495 HSQVDNSEQRKVF-RTYPGVRLKIILSTNIGQTSITIPDLLYVIDTGLAKMKTYDSTIDA 553
Query: 674 PCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQI 733
L +WIS+ V G CY LY Y +PE++R L +CL
Sbjct: 554 SQLTLTWISQADAKQRAGRAGRVCHGNCYRLYDNDRMARMNLYTIPEIMRRTLDEICLLT 613
Query: 734 K-SLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKL 792
K + I FL+ AL P +V + L+++G LDE + +T LG ++ LP+ ++
Sbjct: 614 KLAAPDKKIENFLALALDTPPKDAVMQSCSRLKLLGVLDERDEVTPLGHIVAELPLGVQI 673
Query: 793 GKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFD--KKDLAESAKAQFSARDYSDHLALV 850
GK L+ CLD ++ + A SVRDPF++ + KK + ++ F+ SD LA++
Sbjct: 674 GKCLVYSIYLRCLDSMIIIAAYHSVRDPFVLNIERGKKSGQQISRVLFAGDGMSDSLAVI 733
Query: 851 RAYDGWKDAERHQSGYEYCWKNFLSAQTLK----AIDSLRKQFLFLLKDAGLVDRNTENC 906
+ Y+ + + +R G ++C +NF+ ++ A +LR + + + + +
Sbjct: 734 KLYEEFTNLKRKDIG-DFCERNFICRNAMEMFVSAASTLRDTVYRIFRFS---EASARLA 789
Query: 907 NKWSHDEHLIRAVICAGLFPGLCSVVNKEKSIALKTMEDGQVLLYSNSVNAGVPK---IP 963
+ +++D ++IR + AGL+P L + +++E L D V + +S G K +
Sbjct: 790 SSFNNDTNMIRLALTAGLYPKL-AYMDRENKNQLVAEGDPLVQVSRSSCLRGKKKQKDLA 848
Query: 964 YPWLVFNEKIKVNSVF--LRDSTGVSDSVLLLFGG 996
W++F EK + L +T VS ++ L GG
Sbjct: 849 SEWILFVEKTRTADQISSLEHTTLVSGLMVALAGG 883
Score = 398 (145.2 bits), Expect = 1.1e-79, Sum P(2) = 1.1e-79
Identities = 84/214 (39%), Positives = 124/214 (57%)
Query: 283 ESPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAA 342
+S + + RRSLP YK+R+++L + +QV+++ G TG GK+TQLPQYILE E
Sbjct: 195 QSNRNRNIQHERRSLPIYKQRESILNVLQRDQVLIIKGATGSGKSTQLPQYILEWAAE-- 252
Query: 343 RGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTG-- 400
A I+ +QPRRI+A++VSER++ ERGE G +VGY +R+ +T LM T+G
Sbjct: 253 HRAPVRIVVSQPRRIAAISVSERISKERGEAPGTTVGYNIRMNRQCSSNTVLMLTTSGCL 312
Query: 401 IXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAEL 460
+ TH+I+DE HER ++ DFLL+ MSAT++ E
Sbjct: 313 LRALAMDKKSFFKNTTHLIIDEAHERDLDTDFLLLATKLELQKNPHLRLVLMSATMDLEA 372
Query: 461 FSSYFGGAPMLHIPGFTYPVRAYFLENILEMTRY 494
S+YFGG ++ + G ++ V Y LE+IL T Y
Sbjct: 373 LSNYFGGGTVMDVEGRSFEVSIYHLEDILSKTGY 406
Score = 42 (19.8 bits), Expect = 3.4e-42, Sum P(2) = 3.4e-42
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 458 AELFSSYFGGAPMLHIPGFTYPVRAYFLENIL 489
+EL ++Y+GG ++H P + LE +L
Sbjct: 425 SELLAAYYGGNTIVH-PDIDNDLIVSLLELLL 455
>UNIPROTKB|Q14147 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0008270
GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:D50924 EMBL:AC008754 EMBL:AK297692
IPI:IPI00382739 RefSeq:NP_055496.2 UniGene:Hs.151706
ProteinModelPortal:Q14147 SMR:Q14147 IntAct:Q14147
PhosphoSite:Q14147 DMDM:311033371 PaxDb:Q14147 PRIDE:Q14147
DNASU:9704 Ensembl:ENST00000328771 GeneID:9704 KEGG:hsa:9704
UCSC:uc010xyn.2 CTD:9704 GeneCards:GC19P047853 HGNC:HGNC:16719
HPA:HPA042159 HPA:HPA043558 neXtProt:NX_Q14147 PharmGKB:PA27221
HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B PhylomeDB:Q14147
ChiTaRS:DHX34 GenomeRNAi:9704 NextBio:36469 Bgee:Q14147
CleanEx:HS_DHX34 Genevestigator:Q14147 GermOnline:ENSG00000134815
Uniprot:Q14147
Length = 1143
Score = 537 (194.1 bits), Expect = 1.8e-79, Sum P(2) = 1.8e-79
Identities = 120/332 (36%), Positives = 186/332 (56%)
Query: 570 HIVKKERPGAVLVFMTGWDDINSLKDQLQAHPLLGDPSRVLLLACHGSMASSEQRLIFDK 629
H E G +LVF++G +I+++ + Q + R ++L H +++ ++Q +FD
Sbjct: 371 HKYPPEERGDLLVFLSGMAEISAVLEAAQTYA--SHTQRWVVLPLHSALSVADQDKVFDV 428
Query: 630 PEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXX 689
GVRK +L+TN+AETS+TI+ + FV+D GK KE SYD L WIS+
Sbjct: 429 APPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQR 488
Query: 690 XXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRAL 749
PG C+ LY YDAFA Y +PE+ R L SL LQ+KS+ +G F +
Sbjct: 489 KGRAGRTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDSLVLQMKSMSVGDPRTF--PFI 546
Query: 750 QPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVM 809
+PP P S++ AI YL+ GALD +E LT +G L+ LPV+ +GKMLILG++F+ ++PV+
Sbjct: 547 EPPPPASLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLVEPVL 606
Query: 810 TVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKD--AERHQSGYE 867
T+ A LSV+ PF +A+ + D D L ++ W +ER ++ +
Sbjct: 607 TIAAALSVQSPFTRSAQSSPECAAARRPLES-DQGDPFTLFNVFNAWVQVKSERSRNSRK 665
Query: 868 YCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLV 899
+C + + L + +LR+QF LL+D GL+
Sbjct: 666 WCRRRGIEEHRLYEMANLRRQFKELLEDHGLL 697
Score = 345 (126.5 bits), Expect = 1.8e-79, Sum P(2) = 1.8e-79
Identities = 81/231 (35%), Positives = 125/231 (54%)
Query: 264 ERILRQRSLQMHEKQQAWQESPEGQ--KMLEFRRSLPSYKERDALLKAISENQVVVVSGE 321
ER+ R +H Q+ G+ K+ R +LP + + +L+ + E+QVVVV+G+
Sbjct: 128 ERVAEFRRALLHYLDFG-QKQAFGRLAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGD 186
Query: 322 TGCGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYK 381
TGCGK+TQ+PQY+L A G + + CTQPRRI+ +++++RV E + G VGY+
Sbjct: 187 TGCGKSTQVPQYLL------AAGFS-HVACTQPRRIACISLAKRVGFESLSQYGSQVGYQ 239
Query: 382 VRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXX 441
+R E + T+++F T G+ +IVDE+HER ++ DFLL V
Sbjct: 240 IRFESTRSAATKIVFLTVGLLLRQIQREPSLPQYEVLIVDEVHERHLHNDFLLGVLQRLL 299
Query: 442 XXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYFLENILEMT 492
MSAT+N LFSSYF AP++ +PG +P+ + E T
Sbjct: 300 PTRPDLKVILMSATINISLFSSYFSNAPVVQVPGRLFPITVVYQPQEAEPT 350
>WB|WBGene00003393 [details] [associations]
symbol:mog-5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0048589 "developmental growth" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0040022 "feminization of hermaphroditic germ-line"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 539 (194.8 bits), Expect = 3.2e-79, Sum P(3) = 3.2e-79
Identities = 149/499 (29%), Positives = 255/499 (51%)
Query: 519 ALRKR---KSSIASAVEDALEAAD-FREYSVQT-------QQSLSCWNPDSIGFNLIEHV 567
A RKR K I SA D+++ ++ F E + T + L P+S
Sbjct: 679 AARKRPELKLIITSATLDSVKFSEYFLEAPIFTIPGRTFPVEILYTREPESDYLEAAHIT 738
Query: 568 LCHIVKKERPGAVLVFMTGWDDINSLKDQL-QAHPLLG-DPSRVLLLACHGSMASSEQRL 625
+ I E PG VLVF+TG ++I++ + L + +G D +++L +G++ S Q
Sbjct: 739 VMQIHLTEPPGDVLVFLTGQEEIDTSCEVLYERMKSMGPDVPELIILPVYGALPSEMQTR 798
Query: 626 IFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXX 685
IFD G RK+V+ATN+AETS+TI+ + +V+D G K+ Y+ + L+ + IS+
Sbjct: 799 IFDPAPAGKRKVVIATNIAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQAA 858
Query: 686 XXXXXXXXXXVQPGECYHLYPRYVY-DAFADYQLPELLRTPLQSLCLQIKSLQLGSISEF 744
PG+CY LY + D +PE+ RT L S LQ+K++ + ++ +F
Sbjct: 859 AKQRSGRAGRTGPGKCYRLYTERAFRDEMLPTPVPEIQRTNLASTLLQLKAMGINNLIDF 918
Query: 745 LSRALQPPEPL-SVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFN 803
+ P PL S+ A+ L + ALD + LT LGR ++ P+EP L K+LI+
Sbjct: 919 --DFMDAP-PLDSMITALNTLHTLSALDGDGLLTKLGRRMAEFPLEPSLSKLLIMSVDLG 975
Query: 804 CLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQ 863
C + V+T+VA L+V++ F P +K+D A+ KA+F + DHL L+ Y+ WK+ H
Sbjct: 976 CSEEVLTIVAMLNVQNIFYRPKEKQDHADQKKAKFHQPE-GDHLTLLAVYNSWKN---HH 1031
Query: 864 SGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDEHLIRAVICAG 923
+C++NF+ +++K +RKQ L G++DR+ D ++ IC+G
Sbjct: 1032 FSQPWCFENFIQVRSMKRAQDIRKQLL------GIMDRHKLLMVSCGRDVSRVQKAICSG 1085
Query: 924 LFPGLCSVVNKEKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDS 983
F + ++ +T+ DGQ + Y + +A + P W+V++E + ++R+
Sbjct: 1086 FFR---NAAKRDPQEGYRTLTDGQNV-YIHPSSACFQQQP-EWVVYHELVMTTKEYMREV 1140
Query: 984 TGVSDSVLLLFGGNISRGG 1002
T + L+ F + + G
Sbjct: 1141 TAIDPKWLVEFAPSFFKIG 1159
Score = 337 (123.7 bits), Expect = 3.2e-79, Sum P(3) = 3.2e-79
Identities = 77/195 (39%), Positives = 110/195 (56%)
Query: 290 MLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSI 349
M+E R SLP + + L++A+ +NQ++VV GETG GKTTQ+ QY +E A G I
Sbjct: 533 MVEQRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIE----AGLGRRGKI 588
Query: 350 ICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXX 409
CTQPRR++AM+V++RVA E G KLG VGY +R E +DT + + T G+
Sbjct: 589 GCTQPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECLID 648
Query: 410 XXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAP 469
G + +++DE HER ++ D L + SATL++ FS YF AP
Sbjct: 649 PDLSGYSLIMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYFLEAP 708
Query: 470 MLHIPGFTYPVRAYF 484
+ IPG T+PV +
Sbjct: 709 IFTIPGRTFPVEILY 723
Score = 50 (22.7 bits), Expect = 3.2e-79, Sum P(3) = 3.2e-79
Identities = 13/40 (32%), Positives = 23/40 (57%)
Query: 228 KYINASMSSLSNVGSTTNDEGLYEQQEQLVQNSVVR-ERI 266
K + ++S+ + G+ EG ++QE LV S +R ER+
Sbjct: 235 KIYDGRVNSIQSFGAFITLEGFRQKQEGLVHISQIRNERV 274
Score = 45 (20.9 bits), Expect = 1.1e-78, Sum P(3) = 1.1e-78
Identities = 17/59 (28%), Positives = 27/59 (45%)
Query: 247 EGLYEQQEQLVQNSVVRERILRQRSLQMHEKQQAWQESPEGQKMLEFR-RSLPSYKERD 304
EG YE +++L + S + R RS K++ S G + R RS ++RD
Sbjct: 137 EGRYESEKRLQKESDSKRNRSRSRSRSRDRKRR---RSRSGDRDRRRRSRSREDRRDRD 192
>UNIPROTKB|Q09530 [details] [associations]
symbol:mog-5 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 539 (194.8 bits), Expect = 3.2e-79, Sum P(3) = 3.2e-79
Identities = 149/499 (29%), Positives = 255/499 (51%)
Query: 519 ALRKR---KSSIASAVEDALEAAD-FREYSVQT-------QQSLSCWNPDSIGFNLIEHV 567
A RKR K I SA D+++ ++ F E + T + L P+S
Sbjct: 679 AARKRPELKLIITSATLDSVKFSEYFLEAPIFTIPGRTFPVEILYTREPESDYLEAAHIT 738
Query: 568 LCHIVKKERPGAVLVFMTGWDDINSLKDQL-QAHPLLG-DPSRVLLLACHGSMASSEQRL 625
+ I E PG VLVF+TG ++I++ + L + +G D +++L +G++ S Q
Sbjct: 739 VMQIHLTEPPGDVLVFLTGQEEIDTSCEVLYERMKSMGPDVPELIILPVYGALPSEMQTR 798
Query: 626 IFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXX 685
IFD G RK+V+ATN+AETS+TI+ + +V+D G K+ Y+ + L+ + IS+
Sbjct: 799 IFDPAPAGKRKVVIATNIAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQAA 858
Query: 686 XXXXXXXXXXVQPGECYHLYPRYVY-DAFADYQLPELLRTPLQSLCLQIKSLQLGSISEF 744
PG+CY LY + D +PE+ RT L S LQ+K++ + ++ +F
Sbjct: 859 AKQRSGRAGRTGPGKCYRLYTERAFRDEMLPTPVPEIQRTNLASTLLQLKAMGINNLIDF 918
Query: 745 LSRALQPPEPL-SVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFN 803
+ P PL S+ A+ L + ALD + LT LGR ++ P+EP L K+LI+
Sbjct: 919 --DFMDAP-PLDSMITALNTLHTLSALDGDGLLTKLGRRMAEFPLEPSLSKLLIMSVDLG 975
Query: 804 CLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQ 863
C + V+T+VA L+V++ F P +K+D A+ KA+F + DHL L+ Y+ WK+ H
Sbjct: 976 CSEEVLTIVAMLNVQNIFYRPKEKQDHADQKKAKFHQPE-GDHLTLLAVYNSWKN---HH 1031
Query: 864 SGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDEHLIRAVICAG 923
+C++NF+ +++K +RKQ L G++DR+ D ++ IC+G
Sbjct: 1032 FSQPWCFENFIQVRSMKRAQDIRKQLL------GIMDRHKLLMVSCGRDVSRVQKAICSG 1085
Query: 924 LFPGLCSVVNKEKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDS 983
F + ++ +T+ DGQ + Y + +A + P W+V++E + ++R+
Sbjct: 1086 FFR---NAAKRDPQEGYRTLTDGQNV-YIHPSSACFQQQP-EWVVYHELVMTTKEYMREV 1140
Query: 984 TGVSDSVLLLFGGNISRGG 1002
T + L+ F + + G
Sbjct: 1141 TAIDPKWLVEFAPSFFKIG 1159
Score = 337 (123.7 bits), Expect = 3.2e-79, Sum P(3) = 3.2e-79
Identities = 77/195 (39%), Positives = 110/195 (56%)
Query: 290 MLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSI 349
M+E R SLP + + L++A+ +NQ++VV GETG GKTTQ+ QY +E A G I
Sbjct: 533 MVEQRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIE----AGLGRRGKI 588
Query: 350 ICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXX 409
CTQPRR++AM+V++RVA E G KLG VGY +R E +DT + + T G+
Sbjct: 589 GCTQPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECLID 648
Query: 410 XXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAP 469
G + +++DE HER ++ D L + SATL++ FS YF AP
Sbjct: 649 PDLSGYSLIMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYFLEAP 708
Query: 470 MLHIPGFTYPVRAYF 484
+ IPG T+PV +
Sbjct: 709 IFTIPGRTFPVEILY 723
Score = 50 (22.7 bits), Expect = 3.2e-79, Sum P(3) = 3.2e-79
Identities = 13/40 (32%), Positives = 23/40 (57%)
Query: 228 KYINASMSSLSNVGSTTNDEGLYEQQEQLVQNSVVR-ERI 266
K + ++S+ + G+ EG ++QE LV S +R ER+
Sbjct: 235 KIYDGRVNSIQSFGAFITLEGFRQKQEGLVHISQIRNERV 274
Score = 45 (20.9 bits), Expect = 1.1e-78, Sum P(3) = 1.1e-78
Identities = 17/59 (28%), Positives = 27/59 (45%)
Query: 247 EGLYEQQEQLVQNSVVRERILRQRSLQMHEKQQAWQESPEGQKMLEFR-RSLPSYKERD 304
EG YE +++L + S + R RS K++ S G + R RS ++RD
Sbjct: 137 EGRYESEKRLQKESDSKRNRSRSRSRSRDRKRR---RSRSGDRDRRRRSRSREDRRDRD 192
>UNIPROTKB|E2RTK4 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006692 Uniprot:E2RTK4
Length = 1140
Score = 531 (192.0 bits), Expect = 5.1e-79, Sum P(2) = 5.1e-79
Identities = 120/329 (36%), Positives = 183/329 (55%)
Query: 575 ERPGAVLVFMTGWDDINSLKDQLQAHPLLGDPSRVLLLACHGSMASSEQRLIFDKPEDGV 634
E G +LVF++G +I+S+ + Q + R ++L H +++ ++Q +FD GV
Sbjct: 375 EERGDLLVFLSGMAEISSVLEAAQTYA--SRTQRWVVLPLHSALSVADQDKVFDVAPPGV 432
Query: 635 RKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXX 694
RK +L+TN+AETS+TI+ + FV+D GK KE YD L WIS+
Sbjct: 433 RKCILSTNIAETSVTIDGIRFVVDSGKVKEMGYDPQAKLHRLQEFWISQASAEQRKGRAG 492
Query: 695 XVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPEP 754
PG C+ LY YDAFA Y +PE+ R L +L LQ+KS+ +G F ++PP P
Sbjct: 493 RTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTF--PFIEPPPP 550
Query: 755 LSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAG 814
S++ AI YLQ GALD +E LT +G L+ LPV+ +GKMLILG++F+ +PV+T+ A
Sbjct: 551 ASLETAILYLQDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAAA 610
Query: 815 LSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKD--AERHQSGYEYCWKN 872
LSV+ PF +A+ + D D L ++ W +ER ++ ++C
Sbjct: 611 LSVQSPFTRSAQSNPECAAARRPLES-DQGDPFTLFNVFNAWVQVKSERSRNSRKWCRHR 669
Query: 873 FLSAQTLKAIDSLRKQFLFLLKDAGLVDR 901
+ L + +LR+QF LL+D GL+ R
Sbjct: 670 GIEEHRLYEMANLRRQFKELLEDHGLLAR 698
Score = 347 (127.2 bits), Expect = 5.1e-79, Sum P(2) = 5.1e-79
Identities = 80/223 (35%), Positives = 126/223 (56%)
Query: 264 ERILRQRSLQMHEKQQAWQESPEGQ--KMLEFRRSLPSYKERDALLKAISENQVVVVSGE 321
ER+ R +H + Q+ G+ K+ R +LP + + +L+ + E+QVVVV+G+
Sbjct: 127 ERVTEFRRALLHYLDFS-QKQAFGRLAKLQHERAALPIAQYGNRILQTLKEHQVVVVAGD 185
Query: 322 TGCGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYK 381
TGCGK+TQ+PQY+L A G + + CTQPRRI+ +++++RV+ E + G VGY+
Sbjct: 186 TGCGKSTQVPQYLL------AAGFS-HVACTQPRRIACISLAKRVSFESLSQYGSQVGYQ 238
Query: 382 VRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXX 441
+R E + T+++F T G+ +IVDE+HER ++ DFLL V
Sbjct: 239 IRFESTRTAATKIVFLTVGLLLRQIQREPSLPQYQVLIVDEVHERHLHNDFLLGVLRRLL 298
Query: 442 XXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYF 484
MSAT+N LFSSYFG AP++ +PG +P+ +
Sbjct: 299 PKRPDLKVILMSATINISLFSSYFGTAPVVQVPGRLFPITVVY 341
>UNIPROTKB|E2RTK2 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:DSDQVFH
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006694 Uniprot:E2RTK2
Length = 1177
Score = 531 (192.0 bits), Expect = 6.1e-79, Sum P(2) = 6.1e-79
Identities = 120/329 (36%), Positives = 183/329 (55%)
Query: 575 ERPGAVLVFMTGWDDINSLKDQLQAHPLLGDPSRVLLLACHGSMASSEQRLIFDKPEDGV 634
E G +LVF++G +I+S+ + Q + R ++L H +++ ++Q +FD GV
Sbjct: 380 EERGDLLVFLSGMAEISSVLEAAQTYA--SRTQRWVVLPLHSALSVADQDKVFDVAPPGV 437
Query: 635 RKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXX 694
RK +L+TN+AETS+TI+ + FV+D GK KE YD L WIS+
Sbjct: 438 RKCILSTNIAETSVTIDGIRFVVDSGKVKEMGYDPQAKLHRLQEFWISQASAEQRKGRAG 497
Query: 695 XVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPEP 754
PG C+ LY YDAFA Y +PE+ R L +L LQ+KS+ +G F ++PP P
Sbjct: 498 RTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTF--PFIEPPPP 555
Query: 755 LSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAG 814
S++ AI YLQ GALD +E LT +G L+ LPV+ +GKMLILG++F+ +PV+T+ A
Sbjct: 556 ASLETAILYLQDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAAA 615
Query: 815 LSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKD--AERHQSGYEYCWKN 872
LSV+ PF +A+ + D D L ++ W +ER ++ ++C
Sbjct: 616 LSVQSPFTRSAQSNPECAAARRPLES-DQGDPFTLFNVFNAWVQVKSERSRNSRKWCRHR 674
Query: 873 FLSAQTLKAIDSLRKQFLFLLKDAGLVDR 901
+ L + +LR+QF LL+D GL+ R
Sbjct: 675 GIEEHRLYEMANLRRQFKELLEDHGLLAR 703
Score = 347 (127.2 bits), Expect = 6.1e-79, Sum P(2) = 6.1e-79
Identities = 80/223 (35%), Positives = 126/223 (56%)
Query: 264 ERILRQRSLQMHEKQQAWQESPEGQ--KMLEFRRSLPSYKERDALLKAISENQVVVVSGE 321
ER+ R +H + Q+ G+ K+ R +LP + + +L+ + E+QVVVV+G+
Sbjct: 132 ERVTEFRRALLHYLDFS-QKQAFGRLAKLQHERAALPIAQYGNRILQTLKEHQVVVVAGD 190
Query: 322 TGCGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYK 381
TGCGK+TQ+PQY+L A G + + CTQPRRI+ +++++RV+ E + G VGY+
Sbjct: 191 TGCGKSTQVPQYLL------AAGFS-HVACTQPRRIACISLAKRVSFESLSQYGSQVGYQ 243
Query: 382 VRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXX 441
+R E + T+++F T G+ +IVDE+HER ++ DFLL V
Sbjct: 244 IRFESTRTAATKIVFLTVGLLLRQIQREPSLPQYQVLIVDEVHERHLHNDFLLGVLRRLL 303
Query: 442 XXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYF 484
MSAT+N LFSSYFG AP++ +PG +P+ +
Sbjct: 304 PKRPDLKVILMSATINISLFSSYFGTAPVVQVPGRLFPITVVY 346
>UNIPROTKB|E1BJ90 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:DAAA02047415 IPI:IPI00713665 UniGene:Bt.42016
Ensembl:ENSBTAT00000008999 NextBio:20867826 Uniprot:E1BJ90
Length = 1146
Score = 525 (189.9 bits), Expect = 1.2e-78, Sum P(2) = 1.2e-78
Identities = 118/327 (36%), Positives = 184/327 (56%)
Query: 575 ERPGAVLVFMTGWDDINSLKDQLQAHPLLGDPSRVLLLACHGSMASSEQRLIFDKPEDGV 634
E G +LVF++G +I+++ + QA+ R ++L H +++ ++Q +FD GV
Sbjct: 376 EERGDLLVFLSGMAEISAVLEPAQAYA--SHTQRWVVLPLHSALSVADQDKVFDVAPPGV 433
Query: 635 RKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXX 694
RK +L+TN+AETS+TI+ + FV+D GK KE SYD L WIS+
Sbjct: 434 RKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAG 493
Query: 695 XVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPEP 754
PG C+ LY YDAFA Y +PE+ R L +L LQ+KS+ +G F ++PP P
Sbjct: 494 RTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTF--PFIEPPPP 551
Query: 755 LSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAG 814
S++ AI YL+ GALD +E LT +G L+ LPV+ +GKMLILG++F+ +PV+T+ A
Sbjct: 552 TSLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAAA 611
Query: 815 LSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKD--AERHQSGYEYCWKN 872
LSV+ PF + + + D D L+ ++ W +ER ++ ++C
Sbjct: 612 LSVQTPFTRSAQSNPECAATRRPLES-DQGDPFTLLNVFNTWVQVKSERGRNSRKWCRHR 670
Query: 873 FLSAQTLKAIDSLRKQFLFLLKDAGLV 899
+ L + +LR+QF LL+D GL+
Sbjct: 671 GIEEHRLYEMANLRRQFKELLEDHGLL 697
Score = 350 (128.3 bits), Expect = 1.2e-78, Sum P(2) = 1.2e-78
Identities = 77/205 (37%), Positives = 115/205 (56%)
Query: 289 KMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACS 348
K+ R +LP + +L+ + E+QVVVV+G+TGCGK+TQ+PQY+L A CS
Sbjct: 154 KLQRERAALPIAQYGHHILQMLKEHQVVVVAGDTGCGKSTQVPQYLL--------AAGCS 205
Query: 349 -IICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXX 407
+ CTQPRRI+ +++++RV E + G VGY++R E + T+++F T G+
Sbjct: 206 HVACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQMQ 265
Query: 408 XXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGG 467
+IVDE+HER ++ DFLL V MSAT+N LFSSYFG
Sbjct: 266 REPSLPQYQVLIVDEVHERHLHNDFLLGVLQRLLPQRPDLKVVLMSATINISLFSSYFGN 325
Query: 468 APMLHIPGFTYPVRAYFLENILEMT 492
AP++ +PG +P+ + E T
Sbjct: 326 APVVQVPGRLFPITVVYQPQEAEPT 350
>TAIR|locus:2033723 [details] [associations]
symbol:ESP3 "ENHANCED SILENCING PHENOTYPE 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0008380 "RNA splicing" evidence=NAS]
[GO:0035194 "posttranscriptional gene silencing by RNA"
evidence=IMP] [GO:0016020 "membrane" evidence=IDA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0008380 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 GO:GO:0035194 OMA:GTLHREF EMBL:AY074318 EMBL:AY133872
IPI:IPI00543041 RefSeq:NP_174527.2 UniGene:At.40132
ProteinModelPortal:Q8VY00 IntAct:Q8VY00 PaxDb:Q8VY00 PRIDE:Q8VY00
EnsemblPlants:AT1G32490.1 GeneID:840143 KEGG:ath:AT1G32490
TAIR:At1g32490 InParanoid:Q8VY00 PhylomeDB:Q8VY00
ProtClustDB:CLSN2685836 ArrayExpress:Q8VY00 Genevestigator:Q8VY00
Uniprot:Q8VY00
Length = 1044
Score = 493 (178.6 bits), Expect = 1.6e-78, Sum P(2) = 1.6e-78
Identities = 129/458 (28%), Positives = 242/458 (52%)
Query: 541 REYSVQTQQSLSCWNPDSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQLQAH 600
R Y V+ + S D + ++ + H+ +E G +LVF TG ++I + ++ L+ H
Sbjct: 579 RRYPVEINYT-SAPEADYMDAAIVTILTIHV--REPLGDILVFFTGQEEIETAEEILK-H 634
Query: 601 PLLGDPSRVL-LLAC--HGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVI 657
+ G +++ L+ C + ++ S Q IF+ +G RK+VLATN+AETS+TI+ + +V+
Sbjct: 635 RIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVV 694
Query: 658 DCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDA-FADY 716
D G +K SY+ LL + ISK PG+CY LY + Y+ +
Sbjct: 695 DPGFSKMKSYNPRTGMESLLITPISKASATQRAGRAGRTSPGKCYRLYTAFNYNNDLEEN 754
Query: 717 QLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENL 776
+PE+ RT L S+ L +KSL + + F + PP ++ ++E L +GAL++ L
Sbjct: 755 TVPEVQRTNLASVVLALKSLGIHDLINF--DFMDPPPAEALVKSLELLFALGALNKLGEL 812
Query: 777 TVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDP-FLMPFDKKDLAESAK 835
T GR ++ P++P L KM+++ + C D ++++ A LS+ F P DK+ A++A+
Sbjct: 813 TKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFYRPKDKQVHADNAR 872
Query: 836 AQFSARDYSDHLALVRAYDGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKD 895
F + DH+AL++ Y WK+ ++C++N++ +++K +R Q LL+
Sbjct: 873 MNFHTGNVGDHIALLKVYSSWKETN---FSTQWCYENYIQVRSMKRARDIRDQLEGLLER 929
Query: 896 AGLVDRNTENCNKWSHDEHLIRAVICAGLFPGLCSVVNKEKSIALKTMEDGQVL-LYSNS 954
+D ++ N N+ +R I AG FP + +K+ + +T++ Q + ++ NS
Sbjct: 930 VE-IDISS-NLNELDS----VRKSIVAGFFPHTAKL---QKNGSYRTVKHPQTVHIHPNS 980
Query: 955 VNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVSDSVLL 992
G+ ++ W+V++E + + ++R T + L+
Sbjct: 981 ---GLSQVLPRWVVYHELVLTSKEYMRQVTELKPEWLI 1015
Score = 381 (139.2 bits), Expect = 1.6e-78, Sum P(2) = 1.6e-78
Identities = 90/232 (38%), Positives = 124/232 (53%)
Query: 249 LYEQQEQLVQNSVVRERILRQRSLQMHEKQQAWQESPEGQKMLEFRRSLPSYKERDALLK 308
++E Q ++ SV+ ++ +K Q E +++ E RRSLP Y RD LLK
Sbjct: 357 VFEDQINFIKESVMAGENYED-AMDAKQKSQDLAEKTALEELQEVRRSLPIYTYRDQLLK 415
Query: 309 AISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAA 368
A+ E+QV+V+ G+TG GKTTQ+PQY+ E+ RG + CTQPRR++AM+V+ RVA
Sbjct: 416 AVEEHQVLVIVGDTGSGKTTQIPQYLHEAGY-TKRG---KVGCTQPRRVAAMSVAARVAQ 471
Query: 369 ERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGM 428
E G KLG VGY +R E T L + T G+ + VIVDE HER +
Sbjct: 472 EMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLRELLGEPDLASYSVVIVDEAHERTL 531
Query: 429 NEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPV 480
+ D L + SAT++AE FS YF AP+ PG YPV
Sbjct: 532 STDILFGLVKDIARFRPDLKLLISSATMDAEKFSDYFDTAPIFSFPGRRYPV 583
Score = 59 (25.8 bits), Expect = 1.3e-44, Sum P(2) = 1.3e-44
Identities = 42/197 (21%), Positives = 77/197 (39%)
Query: 108 DESSDDSDREFGSTQQQMCGSTLDNIDEWRW-KLT-MLLRNKDEQEVVSRAKK-DRRDFE 164
D S + +R +++ L + D R KLT L K+++E V RA ++ D
Sbjct: 160 DGSESEEERVRDQKEREELEQHLKDRDTARTRKLTEQTLSKKEKEEAVRRANALEKDDLY 219
Query: 165 QLSALATRMGLHSRQYAKVVVFSKAPLPNYRSDLDEKRPQREVILPFGLLREVDAHLKAY 224
L ++ + L R+ K L R +++++ + + L E + Y
Sbjct: 220 SLRKVSRQEYLKKREQKK--------LDELRDEIEDE----QYLFGGEKLTETELREFRY 267
Query: 225 LSQKY--INASMSSLSNVGSTTNDEGLYEQQEQLVQNSVVRERILRQRSLQMHEK----- 277
+ Y + NV + Y+Q+ + Q + R R L EK
Sbjct: 268 KKELYDLVKKRTQDEDNVEEYRIPDA-YDQEGGVDQEKRFSVAVQRYRDLDSTEKMNPFA 326
Query: 278 -QQAWQESPEGQKMLEF 293
Q+AW++ G+ L+F
Sbjct: 327 EQEAWEDHQIGKATLKF 343
Score = 58 (25.5 bits), Expect = 1.7e-44, Sum P(2) = 1.7e-44
Identities = 26/106 (24%), Positives = 50/106 (47%)
Query: 182 KVVVFSKAPLPNYR-SDLDEKRPQREVILPFGLLREVDAHLKAYLSQKYINASMSSLSNV 240
+VVV K+ + R SD +KR +++ G E D + +++ +S +
Sbjct: 106 EVVVEKKSSVSESRKSDKGKKRFRKKS----GQSDESDGEVAVREDSRHVRRKVSEEDD- 160
Query: 241 GSTTNDEGLYEQQEQ------LVQNSVVRERILRQRSLQMHEKQQA 280
GS + +E + +Q+E+ L R R L +++L EK++A
Sbjct: 161 GSESEEERVRDQKEREELEQHLKDRDTARTRKLTEQTLSKKEKEEA 206
Score = 39 (18.8 bits), Expect = 1.7e-42, Sum P(2) = 1.7e-42
Identities = 11/47 (23%), Positives = 19/47 (40%)
Query: 148 DEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNY 194
D + ++S A D F A R+Y + ++ AP +Y
Sbjct: 549 DLKLLISSATMDAEKFSDYFDTAPIFSFPGRRYPVEINYTSAPEADY 595
>RGD|1310723 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310723
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241 KO:K12818 CTD:1659
OrthoDB:EOG4D26P2 UniGene:Rn.108087 EMBL:AY383690 IPI:IPI00370026
RefSeq:NP_001041309.1 SMR:Q6TXG4 Ensembl:ENSRNOT00000048140
GeneID:287727 KEGG:rno:287727 UCSC:RGD:1310723 NextBio:626887
Genevestigator:Q6TXG4 Uniprot:Q6TXG4
Length = 1210
Score = 534 (193.0 bits), Expect = 3.1e-77, Sum P(3) = 3.1e-77
Identities = 137/441 (31%), Positives = 232/441 (52%)
Query: 557 DSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQL-QAHPLLG-DPSRVLLLAC 614
D + +LI + H+ E PG +LVF+TG ++I++ + L + LG D +++L
Sbjct: 724 DYLDASLITVMQIHLT--EPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPV 781
Query: 615 HGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTP 674
+ ++ S Q IFD G RK+V+ATN+AETS+TI+ + +V+D G K+ Y++
Sbjct: 782 YSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGID 841
Query: 675 CLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVY-DAFADYQLPELLRTPLQSLCLQI 733
L+ + IS+ PG+CY LY Y D +PE+ RT L S L +
Sbjct: 842 QLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSL 901
Query: 734 KSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLG 793
K++ + + F P E L A+E L +GALD+ LT LGR ++ P+EP L
Sbjct: 902 KAMGINDLLSFDFMDAPPMETLIT--AMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLC 959
Query: 794 KMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAY 853
KMLI+ C + ++T+V+ LSV++ F P DK+ LA+ KA+F + DHL L+ Y
Sbjct: 960 KMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTE-GDHLTLLAVY 1018
Query: 854 DGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDE 913
+ WK+ ++ +C++NF+ A++L+ +RKQ L G++DR+ +
Sbjct: 1019 NSWKN---NKFSNPWCYENFIQARSLRRAQDIRKQML------GIMDRHKLDVVSCGKST 1069
Query: 914 HLIRAVICAGLFPGLCSVVNKEKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFNEKI 973
++ IC+G F + K+ +T+ D QV+ Y + +A + P W+V++E +
Sbjct: 1070 VRVQKAICSGFFR---NAAKKDPQEGYRTLIDQQVV-YIHPSSALFNRQP-EWVVYHELV 1124
Query: 974 KVNSVFLRDSTGVSDSVLLLF 994
++R+ T + L+ F
Sbjct: 1125 LTTKEYMREVTTIDPRWLVEF 1145
Score = 332 (121.9 bits), Expect = 3.1e-77, Sum P(3) = 3.1e-77
Identities = 76/195 (38%), Positives = 111/195 (56%)
Query: 290 MLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSI 349
+LE R SLP YK ++ L++A+ +NQ+++V GETG GKTTQ+ QY+ E+ +RG I
Sbjct: 527 ILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGY-TSRG---KI 582
Query: 350 ICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXX 409
CTQPRR++AM+V++RV+ E G LG+ VGY +R E +T + + T G+
Sbjct: 583 GCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLID 642
Query: 410 XXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAP 469
+++DE HER ++ D L + SATL+A FS YF AP
Sbjct: 643 PDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAP 702
Query: 470 MLHIPGFTYPVRAYF 484
+ IPG TYPV +
Sbjct: 703 IFTIPGRTYPVEILY 717
Score = 44 (20.5 bits), Expect = 2.6e-47, Sum P(2) = 2.6e-47
Identities = 12/50 (24%), Positives = 23/50 (46%)
Query: 145 RNKDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNY 194
+ +D + +V+ A D F Q A + R Y ++++K P +Y
Sbjct: 676 KRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDY 725
Score = 42 (19.8 bits), Expect = 3.1e-77, Sum P(3) = 3.1e-77
Identities = 31/127 (24%), Positives = 51/127 (40%)
Query: 145 RNKDEQEVVSRAK-KDR-RDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNYRSDLDEKR 202
R+KD + R + ++R RD + +R HSR + S+ + + R
Sbjct: 145 RDKDRERDRDRERDRERDRDRDHKRRHRSRSRSHSRTRERAKGKSRYRSRSRSQSPFKDR 204
Query: 203 PQREVILPFGLLREVDAHL------KAYLSQKYINASMSSLSNVGSTTNDEGLYEQQEQL 256
RE L R D H+ + + Y N ++S+ G EGL ++ E L
Sbjct: 205 KDREKYGERNLDRWRDKHVDRPPPEEPAIGDIY-NGKVTSIMQFGCFVQLEGLRKRWEGL 263
Query: 257 VQNSVVR 263
V S +R
Sbjct: 264 VHISELR 270
>UNIPROTKB|D4A805 [details] [associations]
symbol:Dhx8 "Protein Dhx8" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1310723 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:CH473948 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
OMA:NAWCYEN IPI:IPI00567810 UniGene:Rn.108087
Ensembl:ENSRNOT00000028198 Uniprot:D4A805
Length = 1242
Score = 534 (193.0 bits), Expect = 3.7e-77, Sum P(3) = 3.7e-77
Identities = 137/441 (31%), Positives = 232/441 (52%)
Query: 557 DSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQL-QAHPLLG-DPSRVLLLAC 614
D + +LI + H+ E PG +LVF+TG ++I++ + L + LG D +++L
Sbjct: 777 DYLDASLITVMQIHLT--EPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPV 834
Query: 615 HGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTP 674
+ ++ S Q IFD G RK+V+ATN+AETS+TI+ + +V+D G K+ Y++
Sbjct: 835 YSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGID 894
Query: 675 CLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVY-DAFADYQLPELLRTPLQSLCLQI 733
L+ + IS+ PG+CY LY Y D +PE+ RT L S L +
Sbjct: 895 QLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSL 954
Query: 734 KSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLG 793
K++ + + F P E L A+E L +GALD+ LT LGR ++ P+EP L
Sbjct: 955 KAMGINDLLSFDFMDAPPMETLIT--AMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLC 1012
Query: 794 KMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAY 853
KMLI+ C + ++T+V+ LSV++ F P DK+ LA+ KA+F + DHL L+ Y
Sbjct: 1013 KMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTE-GDHLTLLAVY 1071
Query: 854 DGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDE 913
+ WK+ ++ +C++NF+ A++L+ +RKQ L G++DR+ +
Sbjct: 1072 NSWKN---NKFSNPWCYENFIQARSLRRAQDIRKQML------GIMDRHKLDVVSCGKST 1122
Query: 914 HLIRAVICAGLFPGLCSVVNKEKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFNEKI 973
++ IC+G F + K+ +T+ D QV+ Y + +A + P W+V++E +
Sbjct: 1123 VRVQKAICSGFFR---NAAKKDPQEGYRTLIDQQVV-YIHPSSALFNRQP-EWVVYHELV 1177
Query: 974 KVNSVFLRDSTGVSDSVLLLF 994
++R+ T + L+ F
Sbjct: 1178 LTTKEYMREVTTIDPRWLVEF 1198
Score = 332 (121.9 bits), Expect = 3.7e-77, Sum P(3) = 3.7e-77
Identities = 76/195 (38%), Positives = 111/195 (56%)
Query: 290 MLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSI 349
+LE R SLP YK ++ L++A+ +NQ+++V GETG GKTTQ+ QY+ E+ +RG I
Sbjct: 580 ILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGY-TSRG---KI 635
Query: 350 ICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXX 409
CTQPRR++AM+V++RV+ E G LG+ VGY +R E +T + + T G+
Sbjct: 636 GCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLID 695
Query: 410 XXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAP 469
+++DE HER ++ D L + SATL+A FS YF AP
Sbjct: 696 PDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAP 755
Query: 470 MLHIPGFTYPVRAYF 484
+ IPG TYPV +
Sbjct: 756 IFTIPGRTYPVEILY 770
Score = 44 (20.5 bits), Expect = 2.9e-47, Sum P(2) = 2.9e-47
Identities = 12/50 (24%), Positives = 23/50 (46%)
Query: 145 RNKDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNY 194
+ +D + +V+ A D F Q A + R Y ++++K P +Y
Sbjct: 729 KRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDY 778
Score = 42 (19.8 bits), Expect = 3.7e-77, Sum P(3) = 3.7e-77
Identities = 31/127 (24%), Positives = 51/127 (40%)
Query: 145 RNKDEQEVVSRAK-KDR-RDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNYRSDLDEKR 202
R+KD + R + ++R RD + +R HSR + S+ + + R
Sbjct: 198 RDKDRERDRDRERDRERDRDRDHKRRHRSRSRSHSRTRERAKGKSRYRSRSRSQSPFKDR 257
Query: 203 PQREVILPFGLLREVDAHL------KAYLSQKYINASMSSLSNVGSTTNDEGLYEQQEQL 256
RE L R D H+ + + Y N ++S+ G EGL ++ E L
Sbjct: 258 KDREKYGERNLDRWRDKHVDRPPPEEPAIGDIY-NGKVTSIMQFGCFVQLEGLRKRWEGL 316
Query: 257 VQNSVVR 263
V S +R
Sbjct: 317 VHISELR 323
>MGI|MGI:1306823 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1306823 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL590994 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR022967 SMART:SM00316 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
OrthoDB:EOG4D26P2 EMBL:BC132445 EMBL:AL591436 IPI:IPI00461304
RefSeq:NP_659080.2 UniGene:Mm.28186 ProteinModelPortal:A2A4P0
SMR:A2A4P0 PaxDb:A2A4P0 PRIDE:A2A4P0 DNASU:217207
Ensembl:ENSMUST00000039152 GeneID:217207 KEGG:mmu:217207
UCSC:uc007lpr.1 InParanoid:A2A4P0 NextBio:375641 Bgee:A2A4P0
Genevestigator:A2A4P0 Uniprot:A2A4P0
Length = 1244
Score = 534 (193.0 bits), Expect = 4.8e-77, Sum P(3) = 4.8e-77
Identities = 137/441 (31%), Positives = 232/441 (52%)
Query: 557 DSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQL-QAHPLLG-DPSRVLLLAC 614
D + +LI + H+ E PG +LVF+TG ++I++ + L + LG D +++L
Sbjct: 779 DYLDASLITVMQIHLT--EPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPV 836
Query: 615 HGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTP 674
+ ++ S Q IFD G RK+V+ATN+AETS+TI+ + +V+D G K+ Y++
Sbjct: 837 YSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGID 896
Query: 675 CLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVY-DAFADYQLPELLRTPLQSLCLQI 733
L+ + IS+ PG+CY LY Y D +PE+ RT L S L +
Sbjct: 897 QLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSL 956
Query: 734 KSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLG 793
K++ + + F P E L A+E L +GALD+ LT LGR ++ P+EP L
Sbjct: 957 KAMGINDLLSFDFMDAPPMETLIT--AMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLC 1014
Query: 794 KMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAY 853
KMLI+ C + ++T+V+ LSV++ F P DK+ LA+ KA+F + DHL L+ Y
Sbjct: 1015 KMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTE-GDHLTLLAVY 1073
Query: 854 DGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDE 913
+ WK+ ++ +C++NF+ A++L+ +RKQ L G++DR+ +
Sbjct: 1074 NSWKN---NKFSNPWCYENFIQARSLRRAQDIRKQML------GIMDRHKLDVVSCGKST 1124
Query: 914 HLIRAVICAGLFPGLCSVVNKEKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFNEKI 973
++ IC+G F + K+ +T+ D QV+ Y + +A + P W+V++E +
Sbjct: 1125 VRVQKAICSGFFR---NAAKKDPQEGYRTLIDQQVV-YIHPSSALFNRQP-EWVVYHELV 1179
Query: 974 KVNSVFLRDSTGVSDSVLLLF 994
++R+ T + L+ F
Sbjct: 1180 LTTKEYMREVTTIDPRWLVEF 1200
Score = 332 (121.9 bits), Expect = 4.8e-77, Sum P(3) = 4.8e-77
Identities = 76/195 (38%), Positives = 111/195 (56%)
Query: 290 MLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSI 349
+LE R SLP YK ++ L++A+ +NQ+++V GETG GKTTQ+ QY+ E+ +RG I
Sbjct: 582 ILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGY-TSRG---KI 637
Query: 350 ICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXX 409
CTQPRR++AM+V++RV+ E G LG+ VGY +R E +T + + T G+
Sbjct: 638 GCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLID 697
Query: 410 XXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAP 469
+++DE HER ++ D L + SATL+A FS YF AP
Sbjct: 698 PDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAP 757
Query: 470 MLHIPGFTYPVRAYF 484
+ IPG TYPV +
Sbjct: 758 IFTIPGRTYPVEILY 772
Score = 44 (20.5 bits), Expect = 3.0e-47, Sum P(2) = 3.0e-47
Identities = 12/50 (24%), Positives = 23/50 (46%)
Query: 145 RNKDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNY 194
+ +D + +V+ A D F Q A + R Y ++++K P +Y
Sbjct: 731 KRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDY 780
Score = 41 (19.5 bits), Expect = 4.8e-77, Sum P(3) = 4.8e-77
Identities = 33/130 (25%), Positives = 51/130 (39%)
Query: 145 RNKDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNYRSDLDEKRP- 203
R+KD + R + RD E+ R SR +++ +K YRS + P
Sbjct: 200 RDKDRERDRDRERDRERDRERDHKRRHRS--RSRSHSRTRERTKGK-SRYRSRSRSQSPF 256
Query: 204 ----QREVILPFGLLREVDAHL------KAYLSQKYINASMSSLSNVGSTTNDEGLYEQQ 253
RE L R D H+ + + Y N ++S+ G EGL ++
Sbjct: 257 KDRKDREKYGERNLDRWRDKHVDRPPPEEPAIGDIY-NGKVTSIMQFGCFVQLEGLRKRW 315
Query: 254 EQLVQNSVVR 263
E LV S +R
Sbjct: 316 EGLVHISELR 325
>UNIPROTKB|Q14562 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0006396 "RNA
processing" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 EMBL:D50487 GO:GO:0005524 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 KO:K12818 OMA:NAWCYEN IPI:IPI00031508 PIR:A56236
RefSeq:NP_004932.1 UniGene:Hs.463105 PDB:2EQS PDB:3I4U PDBsum:2EQS
PDBsum:3I4U ProteinModelPortal:Q14562 SMR:Q14562 IntAct:Q14562
STRING:Q14562 PhosphoSite:Q14562 DMDM:3023637 PaxDb:Q14562
PeptideAtlas:Q14562 PRIDE:Q14562 Ensembl:ENST00000262415
GeneID:1659 KEGG:hsa:1659 UCSC:uc002idu.1 CTD:1659
GeneCards:GC17P041572 HGNC:HGNC:2749 HPA:HPA049285 MIM:600396
neXtProt:NX_Q14562 PharmGKB:PA27231 InParanoid:Q14562
OrthoDB:EOG4D26P2 PhylomeDB:Q14562 EvolutionaryTrace:Q14562
GenomeRNAi:1659 NextBio:6828 ArrayExpress:Q14562 Bgee:Q14562
CleanEx:HS_DHX8 Genevestigator:Q14562 GermOnline:ENSG00000067596
Uniprot:Q14562
Length = 1220
Score = 534 (193.0 bits), Expect = 5.3e-77, Sum P(3) = 5.3e-77
Identities = 137/441 (31%), Positives = 232/441 (52%)
Query: 557 DSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQL-QAHPLLG-DPSRVLLLAC 614
D + +LI + H+ E PG +LVF+TG ++I++ + L + LG D +++L
Sbjct: 755 DYLDASLITVMQIHLT--EPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPV 812
Query: 615 HGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTP 674
+ ++ S Q IFD G RK+V+ATN+AETS+TI+ + +V+D G K+ Y++
Sbjct: 813 YSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGID 872
Query: 675 CLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVY-DAFADYQLPELLRTPLQSLCLQI 733
L+ + IS+ PG+CY LY Y D +PE+ RT L S L +
Sbjct: 873 QLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSL 932
Query: 734 KSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLG 793
K++ + + F P E L A+E L +GALD+ LT LGR ++ P+EP L
Sbjct: 933 KAMGINDLLSFDFMDAPPMETLIT--AMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLC 990
Query: 794 KMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAY 853
KMLI+ C + ++T+V+ LSV++ F P DK+ LA+ KA+F + DHL L+ Y
Sbjct: 991 KMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTE-GDHLTLLAVY 1049
Query: 854 DGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDE 913
+ WK+ ++ +C++NF+ A++L+ +RKQ L G++DR+ +
Sbjct: 1050 NSWKN---NKFSNPWCYENFIQARSLRRAQDIRKQML------GIMDRHKLDVVSCGKST 1100
Query: 914 HLIRAVICAGLFPGLCSVVNKEKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFNEKI 973
++ IC+G F + K+ +T+ D QV+ Y + +A + P W+V++E +
Sbjct: 1101 VRVQKAICSGFFR---NAAKKDPQEGYRTLIDQQVV-YIHPSSALFNRQP-EWVVYHELV 1155
Query: 974 KVNSVFLRDSTGVSDSVLLLF 994
++R+ T + L+ F
Sbjct: 1156 LTTKEYMREVTTIDPRWLVEF 1176
Score = 332 (121.9 bits), Expect = 5.3e-77, Sum P(3) = 5.3e-77
Identities = 76/195 (38%), Positives = 111/195 (56%)
Query: 290 MLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSI 349
+LE R SLP YK ++ L++A+ +NQ+++V GETG GKTTQ+ QY+ E+ +RG I
Sbjct: 558 ILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGY-TSRG---KI 613
Query: 350 ICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXX 409
CTQPRR++AM+V++RV+ E G LG+ VGY +R E +T + + T G+
Sbjct: 614 GCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLID 673
Query: 410 XXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAP 469
+++DE HER ++ D L + SATL+A FS YF AP
Sbjct: 674 PDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAP 733
Query: 470 MLHIPGFTYPVRAYF 484
+ IPG TYPV +
Sbjct: 734 IFTIPGRTYPVEILY 748
Score = 44 (20.5 bits), Expect = 2.7e-47, Sum P(2) = 2.7e-47
Identities = 12/50 (24%), Positives = 23/50 (46%)
Query: 145 RNKDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNY 194
+ +D + +V+ A D F Q A + R Y ++++K P +Y
Sbjct: 707 KRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDY 756
Score = 40 (19.1 bits), Expect = 5.3e-77, Sum P(3) = 5.3e-77
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 231 NASMSSLSNVGSTTNDEGLYEQQEQLVQNSVVR 263
N ++S+ G EGL ++ E LV S +R
Sbjct: 269 NGKVTSIMQFGCFVQLEGLRKRWEGLVHISELR 301
>SGD|S000003088 [details] [associations]
symbol:PRP43 "RNA helicase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IMP;IDA] [GO:0000390 "spliceosomal
complex disassembly" evidence=IGI;IDA] [GO:0030490 "maturation of
SSU-rRNA" evidence=IGI] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0071014 "post-mRNA
release spliceosomal complex" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000003088
GO:GO:0005739 GO:GO:0005524 EMBL:BK006941 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0000463
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0000390 GO:GO:0000466
GO:GO:0000462 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
OrthoDB:EOG4S7NZ4 GO:GO:0071014 EMBL:U41851 EMBL:Z72642 PIR:S64130
RefSeq:NP_011395.1 PDB:2XAU PDB:3KX2 PDBsum:2XAU PDBsum:3KX2
ProteinModelPortal:P53131 SMR:P53131 DIP:DIP-5152N IntAct:P53131
MINT:MINT-497996 STRING:P53131 PaxDb:P53131 PeptideAtlas:P53131
PRIDE:P53131 EnsemblFungi:YGL120C GeneID:852757 KEGG:sce:YGL120C
CYGD:YGL120c EvolutionaryTrace:P53131 NextBio:972201
Genevestigator:P53131 GermOnline:YGL120C Uniprot:P53131
Length = 767
Score = 475 (172.3 bits), Expect = 5.7e-77, Sum P(2) = 5.7e-77
Identities = 130/429 (30%), Positives = 219/429 (51%)
Query: 575 ERPGAVLVFMTGWDDINSL--KDQLQAHPLLGDPS--RVLLLACHGSMASSEQRLIFDK- 629
E G +L+F+TG D+I K L+ L+ + + + +GS+ +Q+ IF+
Sbjct: 301 EEAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPA 360
Query: 630 PE--DGV--RKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXX 685
PE +G RK+V++TN+AETS+TI+ +V+V+D G +K+ Y+ LL S ISK
Sbjct: 361 PESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKAS 420
Query: 686 XXXXXXXXXXVQPGECYHLYPRYVYDA-FADYQLPELLRTPLQSLCLQIKSLQLGSISEF 744
+PG+C+ LY + + PE+LR+ L S L++K L + + F
Sbjct: 421 AQQRAGRAGRTRPGKCFRLYTEEAFQKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHF 480
Query: 745 LSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNC 804
+ PP P ++ A+E L + LD+ NLT LGR S P++P L MLI F C
Sbjct: 481 --DFMDPPAPETMMRALEELNYLACLDDEGNLTPLGRLASQFPLDPMLAVMLIGSFEFQC 538
Query: 805 LDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQS 864
++T+VA LSV + F+ P K A+ AK F+ D DH+ L+ Y +K E ++
Sbjct: 539 SQEILTIVAMLSVPNVFIRPTKDKKRADDAKNIFAHPD-GDHITLLNVYHAFKSDEAYEY 597
Query: 865 G-YEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDEHLIRAVICAG 923
G +++C ++L+ ++L A D++R Q L+ L + NT + + ++ IR + +G
Sbjct: 598 GIHKWCRDHYLNYRSLSAADNIRSQLERLMNRYNL-ELNTTDYESPKYFDN-IRKALASG 655
Query: 924 LFPGLCSVVNKEKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDS 983
F + + K T++D Q +L S G W+++NE + + ++R
Sbjct: 656 FFMQVAKKRSGAKGYI--TVKDNQDVLIHPSTVLGHDA---EWVIYNEFVLTSKNYIRTV 710
Query: 984 TGVSDSVLL 992
T V L+
Sbjct: 711 TSVRPEWLI 719
Score = 376 (137.4 bits), Expect = 5.7e-77, Sum P(2) = 5.7e-77
Identities = 80/201 (39%), Positives = 110/201 (54%)
Query: 284 SPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAAR 343
+P+ +L+ RR LP + +RD LK NQ++V GETG GKTTQ+PQ++L E
Sbjct: 80 TPKYVDILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLE 139
Query: 344 GAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXX 403
+ CTQPRR++AM+V++RVA E KLGE VGY +R E T L + T G+
Sbjct: 140 NT--QVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLL 197
Query: 404 XXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSS 463
+ +I+DE HER + D L+ + MSATL+AE F
Sbjct: 198 REAMEDHDLSRYSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQR 257
Query: 464 YFGGAPMLHIPGFTYPVRAYF 484
YF AP+L +PG TYPV Y+
Sbjct: 258 YFNDAPLLAVPGRTYPVELYY 278
Score = 48 (22.0 bits), Expect = 1.9e-42, Sum P(2) = 1.9e-42
Identities = 17/78 (21%), Positives = 33/78 (42%)
Query: 531 VEDALEAADFREYSVQTQQSLSCWNPDSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDI 590
+ +A+E D YS + ++ +++ +L +VK+ RP ++ M+ D
Sbjct: 197 LREAMEDHDLSRYSCIILDEA---HERTLATDILMGLLKQVVKR-RPDLKIIIMSATLDA 252
Query: 591 NSLKDQLQAHPLLGDPSR 608
+ PLL P R
Sbjct: 253 EKFQRYFNDAPLLAVPGR 270
>ZFIN|ZDB-GENE-050809-39 [details] [associations]
symbol:dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide
8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IMP] [GO:0060215
"primitive hemopoiesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0070054 "mRNA splicing, via endonucleolytic
cleavage and ligation" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-050809-39 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
GO:GO:0060215 InterPro:IPR013957 Pfam:PF08648 EMBL:AL833789
IPI:IPI00498887 RefSeq:XP_002663993.1 UniGene:Dr.159472
ProteinModelPortal:E7F7E3 Ensembl:ENSDART00000066282 GeneID:606595
KEGG:dre:606595 NextBio:20892459 Bgee:E7F7E3 GO:GO:0070054
Uniprot:E7F7E3
Length = 1210
Score = 531 (192.0 bits), Expect = 6.9e-77, Sum P(3) = 6.9e-77
Identities = 137/441 (31%), Positives = 232/441 (52%)
Query: 557 DSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQL-QAHPLLG-DPSRVLLLAC 614
D + +LI + H+ E PG +LVF+TG ++I++ + L + LG D +++L
Sbjct: 745 DYLDASLITVMQIHLT--EPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPV 802
Query: 615 HGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTP 674
+ ++ S Q IFD G RK+V+ATN+AETS+TI+ + +V+D G K+ Y++
Sbjct: 803 YSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGID 862
Query: 675 CLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVY-DAFADYQLPELLRTPLQSLCLQI 733
L+ + IS+ PG+CY LY Y D +PE+ RT L S L +
Sbjct: 863 QLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSL 922
Query: 734 KSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLG 793
K++ + + F P E L A+E L +GALD+ LT LGR ++ P+EP L
Sbjct: 923 KAMGINDLLSFDFMDAPPMETLIT--AMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLC 980
Query: 794 KMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAY 853
KMLI+ C + ++T+V+ LSV++ F P DK+ LA+ KA+F + DHL L+ Y
Sbjct: 981 KMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQPE-GDHLTLLAVY 1039
Query: 854 DGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDE 913
+ WK+ ++ +C++NF+ A++L+ +RKQ L G++DR+ +
Sbjct: 1040 NSWKN---NKFSNPWCYENFIQARSLRRAQDIRKQML------GIMDRHKLDVVSCGKAT 1090
Query: 914 HLIRAVICAGLFPGLCSVVNKEKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFNEKI 973
++ IC+G F + K+ +T+ D QV+ Y + +A + P W+V++E +
Sbjct: 1091 VRVQKAICSGFFR---NAAKKDPQEGYRTLIDQQVV-YIHPSSALFNRQP-EWVVYHELV 1145
Query: 974 KVNSVFLRDSTGVSDSVLLLF 994
++R+ T + L+ F
Sbjct: 1146 LTTKEYMREVTTIDPRWLVEF 1166
Score = 334 (122.6 bits), Expect = 6.9e-77, Sum P(3) = 6.9e-77
Identities = 76/195 (38%), Positives = 110/195 (56%)
Query: 290 MLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSI 349
+LE R SLP YK ++ L++A+ +NQ+++V GETG GKTTQ+ QY+ E+ RG I
Sbjct: 548 ILEQRESLPIYKLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGY-TTRG---KI 603
Query: 350 ICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXX 409
CTQPRR++AM+V++RV+ E G LG+ VGY +R E +T + + T G+
Sbjct: 604 GCTQPRRVAAMSVAKRVSEEYGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLID 663
Query: 410 XXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAP 469
+++DE HER ++ D L + SATL+A FS YF AP
Sbjct: 664 PDLGQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRTDMKLIVTSATLDAVKFSQYFYEAP 723
Query: 470 MLHIPGFTYPVRAYF 484
+ IPG TYPV +
Sbjct: 724 IFTIPGRTYPVEVLY 738
Score = 43 (20.2 bits), Expect = 7.2e-47, Sum P(2) = 7.2e-47
Identities = 13/50 (26%), Positives = 22/50 (44%)
Query: 145 RNKDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNY 194
+ D + +V+ A D F Q A + R Y V+++K P +Y
Sbjct: 697 KRTDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEVLYTKEPETDY 746
Score = 40 (19.1 bits), Expect = 6.9e-77, Sum P(3) = 6.9e-77
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 231 NASMSSLSNVGSTTNDEGLYEQQEQLVQNSVVR 263
N ++S+ G EGL ++ E LV S +R
Sbjct: 259 NGKVTSIMQFGCFVQLEGLRKRWEGLVHISELR 291
>ASPGD|ASPL0000059403 [details] [associations]
symbol:AN0133 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000004 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
OMA:TVLQIHA OrthoDB:EOG4S7NZ4 RefSeq:XP_657737.1 STRING:Q5BH47
EnsemblFungi:CADANIAT00002613 GeneID:2875910 KEGG:ani:AN0133.2
Uniprot:Q5BH47
Length = 769
Score = 490 (177.5 bits), Expect = 7.3e-77, Sum P(2) = 7.3e-77
Identities = 132/432 (30%), Positives = 227/432 (52%)
Query: 575 ERPGAVLVFMTGWDDINSL--KDQLQAHPLL--GDPSRVLLLACHGSMASSEQRLIFD-- 628
E G +L+F+TG ++I K L+ ++ D + + +GS+ Q+ IF+
Sbjct: 307 EDEGDILLFLTGEEEIEDAARKISLEGDEMIREADAGPLKVYTLYGSLPPHMQQRIFEPA 366
Query: 629 ----KP--EDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWIS 682
+P G RK++++TN+AETS+TI+ +V+V+D G +K+ Y+ LL S IS
Sbjct: 367 PPPRRPGGRPG-RKVIVSTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPIS 425
Query: 683 KXXXXXXXXXXXXVQPGECYHLYPRYVYDA-FADYQLPELLRTPLQSLCLQIKSLQLGSI 741
K +PG+C+ LY + D PE+LR+ L S L++K L + +
Sbjct: 426 KASAQQRAGRAGRTRPGKCFRLYTESAFKKELIDQTYPEILRSNLSSTVLELKKLGIDDL 485
Query: 742 SEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAI 801
F + PP P ++ A+E L + LD++ NLT LGR S P++P L MLI
Sbjct: 486 VHF--DLMDPPAPETLMRALEELNYLACLDDDGNLTPLGRLASEFPLDPALAVMLISSPE 543
Query: 802 FNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAER 861
F C + ++++ A LSV F+ P ++ A+ K F+ D DHL L+ AY +K E
Sbjct: 544 FYCSNEILSITALLSVPQIFVRPASQRKRADEMKNLFAHPD-GDHLTLLNAYHAFKSPEA 602
Query: 862 HQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDEHLIRAVIC 921
++ ++C +FLS ++L++ D++R Q L +++ L +T +K ++ IR +C
Sbjct: 603 QENPKQWCHDHFLSLRSLQSADNVRMQLLRIMEREELEMISTSFEDKKYYEN--IRRALC 660
Query: 922 AGLFPGLCSVVNKEKSIALKTMEDGQ-VLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFL 980
AG F + N+ KS+ + T++D Q VLL+ ++V A + W+++NE + ++
Sbjct: 661 AGFFMQVAKKENQGKSMYM-TIKDHQNVLLHPSTVLAHDAE----WVLYNEFVLTTKNYI 715
Query: 981 RDSTGVSDSVLL 992
R T V L+
Sbjct: 716 RTVTAVKPEWLI 727
Score = 358 (131.1 bits), Expect = 7.3e-77, Sum P(2) = 7.3e-77
Identities = 89/262 (33%), Positives = 135/262 (51%)
Query: 290 MLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSI 349
+L+ RR LP + +RD L+ ++Q++V GETG GKTTQ+PQ++L + + I
Sbjct: 92 ILKTRRDLPVHAQRDEFLQLYQQSQILVFVGETGSGKTTQIPQFVLLDDLPQTQRKM--I 149
Query: 350 ICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXX 409
CTQPRR++AM+V++RVAAE LGE VGY +R E M T L + T G+
Sbjct: 150 ACTQPRRVAAMSVAQRVAAELDVTLGEEVGYSIRFEDMTSPKTLLKYMTDGMLLREAMND 209
Query: 410 XXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAP 469
+ +I+DE HER M+ D L+ + MSATL+A+ F YF AP
Sbjct: 210 HELSRYSTIILDEAHERTMSTDVLMGLLKEVVQRRPDLKIIIMSATLDAQKFQRYFNDAP 269
Query: 470 MLHIPGFTYPVRAYFL-ENILEMTRYRLNTYNQI---DDYGQEKSWKMQKQALALRKRKS 525
+L +PG T+PV ++ E + + T QI +D G + ++ + RK
Sbjct: 270 LLAVPGRTHPVEIFYTPEPEQDYVEAAIRTVLQIHATEDEGDILLFLTGEEEIEDAARKI 329
Query: 526 SIASAVEDALEAADFREYSVQT 547
S+ ++ + AD V T
Sbjct: 330 SLEG--DEMIREADAGPLKVYT 349
Score = 39 (18.8 bits), Expect = 2.8e-43, Sum P(2) = 2.8e-43
Identities = 10/37 (27%), Positives = 15/37 (40%)
Query: 572 VKKERPGAVLVFMTGWDDINSLKDQLQAHPLLGDPSR 608
V + RP ++ M+ D + PLL P R
Sbjct: 240 VVQRRPDLKIIIMSATLDAQKFQRYFNDAPLLAVPGR 276
>UNIPROTKB|F1S1H3 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:FP102477 RefSeq:XP_003131427.2
Ensembl:ENSSSCT00000018917 GeneID:100517118 KEGG:ssc:100517118
Uniprot:F1S1H3
Length = 1212
Score = 534 (193.0 bits), Expect = 8.2e-77, Sum P(3) = 8.2e-77
Identities = 137/441 (31%), Positives = 232/441 (52%)
Query: 557 DSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQL-QAHPLLG-DPSRVLLLAC 614
D + +LI + H+ E PG +LVF+TG ++I++ + L + LG D +++L
Sbjct: 747 DYLDASLITVMQIHLT--EPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPV 804
Query: 615 HGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTP 674
+ ++ S Q IFD G RK+V+ATN+AETS+TI+ + +V+D G K+ Y++
Sbjct: 805 YSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGID 864
Query: 675 CLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVY-DAFADYQLPELLRTPLQSLCLQI 733
L+ + IS+ PG+CY LY Y D +PE+ RT L S L +
Sbjct: 865 QLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSL 924
Query: 734 KSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLG 793
K++ + + F P E L A+E L +GALD+ LT LGR ++ P+EP L
Sbjct: 925 KAMGINDLLSFDFMDAPPMETLIT--AMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLC 982
Query: 794 KMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAY 853
KMLI+ C + ++T+V+ LSV++ F P DK+ LA+ KA+F + DHL L+ Y
Sbjct: 983 KMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTE-GDHLTLLAVY 1041
Query: 854 DGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDE 913
+ WK+ ++ +C++NF+ A++L+ +RKQ L G++DR+ +
Sbjct: 1042 NSWKN---NKFSNPWCYENFIQARSLRRAQDIRKQML------GIMDRHKLDVVSCGKST 1092
Query: 914 HLIRAVICAGLFPGLCSVVNKEKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFNEKI 973
++ IC+G F + K+ +T+ D QV+ Y + +A + P W+V++E +
Sbjct: 1093 VRVQKAICSGFFR---NAAKKDPQEGYRTLIDQQVV-YIHPSSALFNRQP-EWVVYHELV 1147
Query: 974 KVNSVFLRDSTGVSDSVLLLF 994
++R+ T + L+ F
Sbjct: 1148 LTTKEYMREVTTIDPRWLVEF 1168
Score = 330 (121.2 bits), Expect = 8.2e-77, Sum P(3) = 8.2e-77
Identities = 75/195 (38%), Positives = 111/195 (56%)
Query: 290 MLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSI 349
++E R SLP YK ++ L++A+ +NQ+++V GETG GKTTQ+ QY+ E+ +RG I
Sbjct: 550 IIEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGY-TSRG---KI 605
Query: 350 ICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXX 409
CTQPRR++AM+V++RV+ E G LG+ VGY +R E +T + + T G+
Sbjct: 606 GCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLID 665
Query: 410 XXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAP 469
+++DE HER ++ D L + SATL+A FS YF AP
Sbjct: 666 PDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAP 725
Query: 470 MLHIPGFTYPVRAYF 484
+ IPG TYPV +
Sbjct: 726 IFTIPGRTYPVEILY 740
Score = 44 (20.5 bits), Expect = 2.6e-47, Sum P(2) = 2.6e-47
Identities = 12/50 (24%), Positives = 23/50 (46%)
Query: 145 RNKDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNY 194
+ +D + +V+ A D F Q A + R Y ++++K P +Y
Sbjct: 699 KRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDY 748
Score = 40 (19.1 bits), Expect = 8.2e-77, Sum P(3) = 8.2e-77
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 231 NASMSSLSNVGSTTNDEGLYEQQEQLVQNSVVR 263
N ++S+ G EGL ++ E LV S +R
Sbjct: 261 NGKVTSIMQFGCFVQLEGLRKRWEGLVHISELR 293
>UNIPROTKB|E2R9R9 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:AAEX03006434 EMBL:AAEX03006433
RefSeq:XP_537627.2 ProteinModelPortal:E2R9R9
Ensembl:ENSCAFT00000023129 GeneID:480507 KEGG:cfa:480507
Uniprot:E2R9R9
Length = 1216
Score = 534 (193.0 bits), Expect = 8.4e-77, Sum P(3) = 8.4e-77
Identities = 137/441 (31%), Positives = 232/441 (52%)
Query: 557 DSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQL-QAHPLLG-DPSRVLLLAC 614
D + +LI + H+ E PG +LVF+TG ++I++ + L + LG D +++L
Sbjct: 751 DYLDASLITVMQIHLT--EPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPV 808
Query: 615 HGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTP 674
+ ++ S Q IFD G RK+V+ATN+AETS+TI+ + +V+D G K+ Y++
Sbjct: 809 YSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGID 868
Query: 675 CLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVY-DAFADYQLPELLRTPLQSLCLQI 733
L+ + IS+ PG+CY LY Y D +PE+ RT L S L +
Sbjct: 869 QLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSL 928
Query: 734 KSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLG 793
K++ + + F P E L A+E L +GALD+ LT LGR ++ P+EP L
Sbjct: 929 KAMGINDLLSFDFMDAPPMETLIT--AMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLC 986
Query: 794 KMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAY 853
KMLI+ C + ++T+V+ LSV++ F P DK+ LA+ KA+F + DHL L+ Y
Sbjct: 987 KMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTE-GDHLTLLAVY 1045
Query: 854 DGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDE 913
+ WK+ ++ +C++NF+ A++L+ +RKQ L G++DR+ +
Sbjct: 1046 NSWKN---NKFSNPWCYENFIQARSLRRAQDIRKQML------GIMDRHKLDVVSCGKST 1096
Query: 914 HLIRAVICAGLFPGLCSVVNKEKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFNEKI 973
++ IC+G F + K+ +T+ D QV+ Y + +A + P W+V++E +
Sbjct: 1097 VRVQKAICSGFFR---NAAKKDPQEGYRTLIDQQVV-YIHPSSALFNRQP-EWVVYHELV 1151
Query: 974 KVNSVFLRDSTGVSDSVLLLF 994
++R+ T + L+ F
Sbjct: 1152 LTTKEYMREVTTIDPRWLVEF 1172
Score = 330 (121.2 bits), Expect = 8.4e-77, Sum P(3) = 8.4e-77
Identities = 75/195 (38%), Positives = 111/195 (56%)
Query: 290 MLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSI 349
++E R SLP YK ++ L++A+ +NQ+++V GETG GKTTQ+ QY+ E+ +RG I
Sbjct: 554 IIEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGY-TSRG---KI 609
Query: 350 ICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXX 409
CTQPRR++AM+V++RV+ E G LG+ VGY +R E +T + + T G+
Sbjct: 610 GCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLID 669
Query: 410 XXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAP 469
+++DE HER ++ D L + SATL+A FS YF AP
Sbjct: 670 PDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAP 729
Query: 470 MLHIPGFTYPVRAYF 484
+ IPG TYPV +
Sbjct: 730 IFTIPGRTYPVEILY 744
Score = 44 (20.5 bits), Expect = 2.7e-47, Sum P(2) = 2.7e-47
Identities = 12/50 (24%), Positives = 23/50 (46%)
Query: 145 RNKDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNY 194
+ +D + +V+ A D F Q A + R Y ++++K P +Y
Sbjct: 703 KRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDY 752
Score = 40 (19.1 bits), Expect = 8.4e-77, Sum P(3) = 8.4e-77
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 231 NASMSSLSNVGSTTNDEGLYEQQEQLVQNSVVR 263
N ++S+ G EGL ++ E LV S +R
Sbjct: 265 NGKVTSIMQFGCFVQLEGLRKRWEGLVHISELR 297
>UNIPROTKB|F1MEM4 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
OMA:NAWCYEN EMBL:DAAA02049231 EMBL:DAAA02049230 IPI:IPI00695401
Ensembl:ENSBTAT00000010976 Uniprot:F1MEM4
Length = 1230
Score = 534 (193.0 bits), Expect = 9.1e-77, Sum P(3) = 9.1e-77
Identities = 137/441 (31%), Positives = 232/441 (52%)
Query: 557 DSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQL-QAHPLLG-DPSRVLLLAC 614
D + +LI + H+ E PG +LVF+TG ++I++ + L + LG D +++L
Sbjct: 765 DYLDASLITVMQIHLT--EPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPV 822
Query: 615 HGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTP 674
+ ++ S Q IFD G RK+V+ATN+AETS+TI+ + +V+D G K+ Y++
Sbjct: 823 YSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGID 882
Query: 675 CLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVY-DAFADYQLPELLRTPLQSLCLQI 733
L+ + IS+ PG+CY LY Y D +PE+ RT L S L +
Sbjct: 883 QLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSL 942
Query: 734 KSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLG 793
K++ + + F P E L A+E L +GALD+ LT LGR ++ P+EP L
Sbjct: 943 KAMGINDLLSFDFMDAPPMETLIT--AMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLC 1000
Query: 794 KMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAY 853
KMLI+ C + ++T+V+ LSV++ F P DK+ LA+ KA+F + DHL L+ Y
Sbjct: 1001 KMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTE-GDHLTLLAVY 1059
Query: 854 DGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDE 913
+ WK+ ++ +C++NF+ A++L+ +RKQ L G++DR+ +
Sbjct: 1060 NSWKN---NKFSNPWCYENFIQARSLRRAQDIRKQML------GIMDRHKLDVVSCGKST 1110
Query: 914 HLIRAVICAGLFPGLCSVVNKEKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFNEKI 973
++ IC+G F + K+ +T+ D QV+ Y + +A + P W+V++E +
Sbjct: 1111 VRVQKAICSGFFR---NAAKKDPQEGYRTLIDQQVV-YIHPSSALFNRQP-EWVVYHELV 1165
Query: 974 KVNSVFLRDSTGVSDSVLLLF 994
++R+ T + L+ F
Sbjct: 1166 LTTKEYMREVTTIDPRWLVEF 1186
Score = 330 (121.2 bits), Expect = 9.1e-77, Sum P(3) = 9.1e-77
Identities = 75/195 (38%), Positives = 111/195 (56%)
Query: 290 MLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSI 349
++E R SLP YK ++ L++A+ +NQ+++V GETG GKTTQ+ QY+ E+ +RG I
Sbjct: 568 IIEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGY-TSRG---KI 623
Query: 350 ICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXX 409
CTQPRR++AM+V++RV+ E G LG+ VGY +R E +T + + T G+
Sbjct: 624 GCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLID 683
Query: 410 XXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAP 469
+++DE HER ++ D L + SATL+A FS YF AP
Sbjct: 684 PDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAP 743
Query: 470 MLHIPGFTYPVRAYF 484
+ IPG TYPV +
Sbjct: 744 IFTIPGRTYPVEILY 758
Score = 44 (20.5 bits), Expect = 2.8e-47, Sum P(2) = 2.8e-47
Identities = 12/50 (24%), Positives = 23/50 (46%)
Query: 145 RNKDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNY 194
+ +D + +V+ A D F Q A + R Y ++++K P +Y
Sbjct: 717 KRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDY 766
Score = 40 (19.1 bits), Expect = 9.1e-77, Sum P(3) = 9.1e-77
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 231 NASMSSLSNVGSTTNDEGLYEQQEQLVQNSVVR 263
N ++S+ G EGL ++ E LV S +R
Sbjct: 279 NGKVTSIMQFGCFVQLEGLRKRWEGLVHISELR 311
>ASPGD|ASPL0000014477 [details] [associations]
symbol:AN4032 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:BN001302
EMBL:AACD01000065 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12815 OMA:PSRSTWE OrthoDB:EOG4GQTD2
RefSeq:XP_661636.1 EnsemblFungi:CADANIAT00004650 GeneID:2873454
KEGG:ani:AN4032.2 Uniprot:Q5B5Z8
Length = 924
Score = 490 (177.5 bits), Expect = 1.0e-76, Sum P(2) = 1.0e-76
Identities = 133/441 (30%), Positives = 230/441 (52%)
Query: 564 IEHVLC-HIVKKERPGAVLVFMTGWDDINSLKDQLQAH-PLLGDPSRVLLLACHGSMASS 621
++ VL H+ + PG +LVFMTG +DI + + + LL DP ++ +L + M +
Sbjct: 384 VKQVLAIHV--SQGPGDILVFMTGQEDIEATCELVDERLKLLNDPPKLSILPIYSQMPAE 441
Query: 622 EQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWI 681
+Q IF++ GVRK+++ATN+AETS+T++ ++FV+D G +K Y+ L + I
Sbjct: 442 QQAKIFERAAPGVRKVIVATNIAETSLTVDGIMFVVDSGYSKLKVYNPKMGMDTLQITPI 501
Query: 682 SKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQ-LPELLRTPLQSLCLQIKSLQLGS 740
S+ PG+ Y LY Y Q +PE+ RT L + L +KSL +
Sbjct: 502 SQANANQRSGRAGRTGPGKAYRLYTEVAYKNEMYLQTIPEIQRTSLSNTVLLLKSLGVKD 561
Query: 741 ISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGA 800
+ +F + PP ++ ++ L +GALD +LT LGR ++ P++P L K++I A
Sbjct: 562 LLDF--DFMDPPPQETISTSLFELWSLGALDNLGDLTHLGRQMTPFPMDPPLAKLIITAA 619
Query: 801 I-FNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDA 859
+ C + ++T+V+ LSV + F P ++++ +++A+ +F + SDHL L+ Y WK
Sbjct: 620 EQYGCSEEMLTIVSMLSVPNVFYRPKERQEESDAAREKFFVPE-SDHLTLLHVYTQWKS- 677
Query: 860 ERHQSGYE--YCWKNFLSAQTLKAIDSLRKQF--LFLLKDAGLVDRNTENCNKWSHDEHL 915
+GY +C K+FL A+TL+ +R Q + +++ L+ T+ W DE
Sbjct: 678 ----NGYSDHWCTKHFLHAKTLRRAKEVRDQLNDIMVMQKLPLISCGTD----W--DE-- 725
Query: 916 IRAVICAGLFPGLCSVVNKEKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFNEKIKV 975
IR IC+G + V + I L+T + L+ S G+ +P ++V++E I
Sbjct: 726 IRKCICSGFYHQAARVKGIGEFINLRTSVS--MALHPTSALYGLGYVP-EYVVYHELILT 782
Query: 976 NSVFLRDSTGVSDSVLLLFGG 996
+ ++ T V L GG
Sbjct: 783 SKEYMSTVTAVDPHWLAELGG 803
Score = 364 (133.2 bits), Expect = 1.0e-76, Sum P(2) = 1.0e-76
Identities = 86/212 (40%), Positives = 119/212 (56%)
Query: 274 MHEKQQAWQESPEGQKML-EFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQ 332
M ++ + Q S K L E R LP++ R+ LL+ I +NQVVVV GETG GKTTQL Q
Sbjct: 164 MKKQDEGGQSSFSKSKTLREQREFLPAFAVREDLLRVIRDNQVVVVVGETGSGKTTQLTQ 223
Query: 333 YILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDT 392
++ E + A G I CTQPRR++AM+V++RV+ E LG+ VGY +R E G +T
Sbjct: 224 FLYE-DGYAKFGM---IGCTQPRRVAAMSVAKRVSEEMEVDLGDLVGYAIRFEDCTGPNT 279
Query: 393 RLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXM 452
+ + T G+ + +I+DE HER +N D L+ +
Sbjct: 280 AIKYMTDGVLLRESLVQTDLDKYSCIIMDEAHERALNTDVLMGLLKKILARRRDLKLIVT 339
Query: 453 SATLNAELFSSYFGGAPMLHIPGFTYPVRAYF 484
SAT+NAE FS +FGGAP IPG T+PV +F
Sbjct: 340 SATMNAERFSRFFGGAPEFIIPGRTFPVDVHF 371
Score = 46 (21.3 bits), Expect = 3.1e-43, Sum P(2) = 3.1e-43
Identities = 13/53 (24%), Positives = 24/53 (45%)
Query: 142 MLLRNKDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNY 194
+L R +D + +V+ A + F + A + R + V FS+ P +Y
Sbjct: 327 ILARRRDLKLIVTSATMNAERFSRFFGGAPEFIIPGRTFPVDVHFSRTPCEDY 379
>UNIPROTKB|F1RLY9 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:9704 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:FP102420 RefSeq:XP_003127294.1 Ensembl:ENSSSCT00000003454
GeneID:100515780 KEGG:ssc:100515780 Uniprot:F1RLY9
Length = 1146
Score = 504 (182.5 bits), Expect = 1.1e-76, Sum P(2) = 1.1e-76
Identities = 117/329 (35%), Positives = 180/329 (54%)
Query: 575 ERPGAVLVFMTGWDDINSLKDQLQAHPLLGDPSRVLLLACHGSMASSEQRLIFDKPEDGV 634
E G +LVF++G +I ++ + QAH R ++L H +++ + Q +FD GV
Sbjct: 376 EERGDLLVFLSGLAEIGAVLEAAQAHARRS--GRWVVLPLHSTLSVAAQDKVFDVAPPGV 433
Query: 635 RKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXX 694
RK +L+TN+AETS+TI+ + FV+D GK KE SYD L WIS+
Sbjct: 434 RKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAG 493
Query: 695 XVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPEP 754
PG C+ LY YDAFA Y +PE+ R L +L LQ+KS+ +G F ++PP
Sbjct: 494 RTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTF--PFIEPPPA 551
Query: 755 LSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAG 814
S++ AI YL+ GALD +E LT +G L+ LPV+ +GKML+LG++ + +PV+T+ A
Sbjct: 552 ASLETAILYLRDQGALDGSEALTPIGSLLAQLPVDIVIGKMLVLGSVLHLAEPVLTIAAA 611
Query: 815 LSVRDPFLMPFDKKDLAESAKAQFSA--RDYSDHLALVRAYDGWKD--AERHQSGYEYCW 870
LSV+ PF + + K + A D+ D L ++ W ++R +C
Sbjct: 612 LSVQSPFT-----RSTRSNPKCAWRALESDHGDPFTLFNVFNNWVQVKSDRSTKSRRWCR 666
Query: 871 KNFLSAQTLKAIDSLRKQFLFLLKDAGLV 899
+ + L + +LR+QF LL+D GL+
Sbjct: 667 REGIEEHRLYEMANLRRQFKELLEDHGLL 695
Score = 354 (129.7 bits), Expect = 1.1e-76, Sum P(2) = 1.1e-76
Identities = 76/199 (38%), Positives = 115/199 (57%)
Query: 294 RRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQ 353
R +LP + RD +L+ + E+QVVVV+G+TGCGK+TQ+PQY+L A G + + CTQ
Sbjct: 159 RAALPISQYRDRILQTLKEHQVVVVAGDTGCGKSTQVPQYLL------AAGFS-HVACTQ 211
Query: 354 PRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXX 413
PRRI+ +++++RV E + G VGY++R E + T+++F T G+
Sbjct: 212 PRRIACISLAKRVGLESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRHVQREPTLP 271
Query: 414 GVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHI 473
+IVDE+HER ++ DFLL V MSAT+N LFS+YFG AP++ +
Sbjct: 272 QYRVLIVDEVHERHLHNDFLLGVLQRLLPRRPDLKVILMSATVNTSLFSAYFGQAPVVQV 331
Query: 474 PGFTYPVRAYFLENILEMT 492
PG +P+ + E T
Sbjct: 332 PGRLFPITVVYQPQEAEPT 350
>UNIPROTKB|F1P306 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967
SMART:SM00316 GeneTree:ENSGT00700000104241 EMBL:AADN02070153
EMBL:AADN02070154 IPI:IPI00591627 Ensembl:ENSGALT00000001801
OMA:AMANTAM Uniprot:F1P306
Length = 1168
Score = 532 (192.3 bits), Expect = 1.3e-76, Sum P(3) = 1.3e-76
Identities = 137/441 (31%), Positives = 232/441 (52%)
Query: 557 DSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQL-QAHPLLG-DPSRVLLLAC 614
D + +LI + H+ E PG +LVF+TG ++I++ + L + LG D +++L
Sbjct: 703 DYLDASLITVMQIHLT--EPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPV 760
Query: 615 HGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTP 674
+ ++ S Q IFD G RK+V+ATN+AETS+TI+ + +V+D G K+ Y++
Sbjct: 761 YSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGID 820
Query: 675 CLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVY-DAFADYQLPELLRTPLQSLCLQI 733
L+ + IS+ PG+CY LY Y D +PE+ RT L S L +
Sbjct: 821 QLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSL 880
Query: 734 KSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLG 793
K++ + + F P E L A+E L +GALD+ LT LGR ++ P+EP L
Sbjct: 881 KAMGINDLLSFDFMDAPPMETLIT--AMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLC 938
Query: 794 KMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAY 853
KMLI+ C + ++T+V+ LSV++ F P DK+ LA+ KA+F + DHL L+ Y
Sbjct: 939 KMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTE-GDHLTLLAVY 997
Query: 854 DGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDE 913
+ WK+ ++ +C++NF+ A++L+ +RKQ L G++DR+ +
Sbjct: 998 NSWKN---NKFSNPWCYENFIQARSLRRAQDIRKQML------GIMDRHKLDVVSCGKAT 1048
Query: 914 HLIRAVICAGLFPGLCSVVNKEKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFNEKI 973
++ IC+G F + K+ +T+ D QV+ Y + +A + P W+V++E +
Sbjct: 1049 VRVQKAICSGFFR---NAAKKDPQEGYRTLIDQQVV-YIHPSSALFNRQP-EWVVYHELV 1103
Query: 974 KVNSVFLRDSTGVSDSVLLLF 994
++R+ T + L+ F
Sbjct: 1104 LTTKEYMREVTTIDPRWLVEF 1124
Score = 324 (119.1 bits), Expect = 1.3e-76, Sum P(3) = 1.3e-76
Identities = 73/195 (37%), Positives = 111/195 (56%)
Query: 290 MLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSI 349
++E R SLP ++ ++ L++A+ +NQ+++V GETG GKTTQ+ QY+ E+ +RG I
Sbjct: 506 IIEQRESLPIFRLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGY-TSRG---KI 561
Query: 350 ICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXX 409
CTQPRR++AM+V++RV+ E G LG+ VGY +R E +T + + T G+
Sbjct: 562 GCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLID 621
Query: 410 XXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAP 469
+++DE HER ++ D L + SATL+A FS YF AP
Sbjct: 622 PDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAP 681
Query: 470 MLHIPGFTYPVRAYF 484
+ IPG TYPV +
Sbjct: 682 IFTIPGRTYPVEILY 696
Score = 45 (20.9 bits), Expect = 1.3e-76, Sum P(3) = 1.3e-76
Identities = 32/127 (25%), Positives = 53/127 (41%)
Query: 143 LLRNKDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNYRSDLDEKR 202
LLR K ++ SR++ +R S +R R K +S++ RS ++R
Sbjct: 162 LLRAKKKRRSRSRSRDRKRRHRSRSRSRSRT--RDRNRGKSRYYSRS---RSRSPSRDRR 216
Query: 203 PQREVILPFGLLREVDAHL------KAYLSQKYINASMSSLSNVGSTTNDEGLYEQQEQL 256
R+ L R D H+ + + Y N ++S+ G EGL ++ E L
Sbjct: 217 -DRDKYLERSNERWRDKHVDRPPPEEPSIGDIY-NGKVTSIMQFGCFVQLEGLRKRWEGL 274
Query: 257 VQNSVVR 263
V S +R
Sbjct: 275 VHISELR 281
Score = 44 (20.5 bits), Expect = 3.6e-47, Sum P(2) = 3.6e-47
Identities = 12/50 (24%), Positives = 23/50 (46%)
Query: 145 RNKDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNY 194
+ +D + +V+ A D F Q A + R Y ++++K P +Y
Sbjct: 655 KRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDY 704
>TAIR|locus:2062492 [details] [associations]
symbol:MEE29 "maternal effect embryo arrest 29"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 GO:GO:0009793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:RIDDHRD IPI:IPI00520097
RefSeq:NP_181077.3 UniGene:At.53041 ProteinModelPortal:F4IJV4
SMR:F4IJV4 PRIDE:F4IJV4 EnsemblPlants:AT2G35340.1 GeneID:818101
KEGG:ath:AT2G35340 Uniprot:F4IJV4
Length = 1044
Score = 491 (177.9 bits), Expect = 3.6e-76, Sum P(2) = 3.6e-76
Identities = 122/424 (28%), Positives = 230/424 (54%)
Query: 574 KERPGAVLVFMTGWDDINSLKDQLQAHPLLGDPSRVL-LLAC--HGSMASSEQRLIFDKP 630
KE G VLVF+ G ++I ++++ L+ H + G +++ L+ C + ++ S Q IF+
Sbjct: 609 KEPLGDVLVFLPGQEEIEAVEENLK-HKIRGLGTKIRELIICPIYANLPSELQAKIFEPT 667
Query: 631 EDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXX 690
+G RK+VLATN+AETS+TI+ + +V+D G +K SY+ LL + ISK
Sbjct: 668 PEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLVTPISKASATQRT 727
Query: 691 XXXXXVQPGECYHLYPRY-VYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRAL 749
PG+CY LY + Y+ D +PE+ RT L S+ L +KSL + ++ F +
Sbjct: 728 GRAGRTSPGKCYRLYTAFNYYNDLEDNTVPEIQRTNLASVVLSLKSLGIHNLLNF--DFM 785
Query: 750 QPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVM 809
PP ++ ++E L +GAL++ LT GR ++ P++P L KM+++ + C D ++
Sbjct: 786 DPPPSEALIKSLELLFALGALNQLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEII 845
Query: 810 TVVAGLSVRDP-FLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYEY 868
++ A LS+ F P DK+ A++A F + DH+A ++ Y+ WK E + S ++
Sbjct: 846 SIAAMLSIGPSIFYRPKDKQVHADNAMKNFHVGNVGDHIAFLKIYNSWK--ETNYST-QW 902
Query: 869 CWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDEHLIRAVICAGLFPGL 928
C++N++ +++K +R Q GL++R + + +++ IR I AG FP
Sbjct: 903 CYENYIQVRSMKRARDIRDQL------EGLLERVEIDVSSNANELDSIRKSIVAGFFPHT 956
Query: 929 CSVVNKEKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVSD 988
+ +K+ + +T++ Q + + +G+ ++ W+V+++ + + ++R T +
Sbjct: 957 AKL---QKNGSYRTVKHPQTVHIHPA--SGLSQVLPRWVVYHQLVLTSKEYMRQVTELKP 1011
Query: 989 SVLL 992
L+
Sbjct: 1012 EWLI 1015
Score = 361 (132.1 bits), Expect = 3.6e-76, Sum P(2) = 3.6e-76
Identities = 93/268 (34%), Positives = 131/268 (48%)
Query: 219 AHLKAYLSQKYINASMS-SLSNVGSTTNDEGLYEQQEQLVQNSVVRERILRQRSLQMHEK 277
A +A+ + NA++ N + N E ++E Q ++ SV+ +MH K
Sbjct: 327 AEQEAWEDHQIENAALKFGAKNKEVSDNYEFVFEDQIDFIKASVLAGDNYED---EMHAK 383
Query: 278 QQAWQESPEGQKML-EFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILE 336
ML E R++LP Y RD LL A+ ++QV+++ GETG GKTTQ+PQY+
Sbjct: 384 PSQDSAGKSAFHMLQEDRKALPIYTYRDQLLNAVKDHQVLIIVGETGSGKTTQIPQYL-- 441
Query: 337 SETEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMF 396
EA + CTQPRR++AM+V+ RVA E G KLG VGY +R E T L +
Sbjct: 442 --HEAGYTKLGKVGCTQPRRVAAMSVAARVAQEMGGKLGHEVGYSIRFEDCTSEKTILKY 499
Query: 397 CTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATL 456
T G+ + +IVDE HER + D L + SAT+
Sbjct: 500 MTDGMLLRELLGEPDLGSYSVIIVDEAHERTLRTDILFGLVKDIARARPDLKLLISSATM 559
Query: 457 NAELFSSYFGGAPMLHIPGFTYPVRAYF 484
+AE FS +F AP+ PG YPV F
Sbjct: 560 DAEKFSDFFDQAPIFRFPGRRYPVDICF 587
Score = 43 (20.2 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 227 QKYINASMSSLSNVGSTTNDEGLYEQQEQLVQNSVVRER-ILRQRSL---QMHEKQQ 279
++ + +S + G+ + +E L +Q+E+ +RER R R L +M +K+Q
Sbjct: 148 KRNVRRKVSEDEDDGTESEEERLRDQREREELEQHLRERDTARTRKLTEPKMSKKEQ 204
Score = 40 (19.1 bits), Expect = 2.2e-42, Sum P(2) = 2.2e-42
Identities = 12/47 (25%), Positives = 19/47 (40%)
Query: 148 DEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNY 194
D + ++S A D F A R+Y + F+ AP +Y
Sbjct: 549 DLKLLISSATMDAEKFSDFFDQAPIFRFPGRRYPVDICFTTAPEADY 595
>TAIR|locus:2095989 [details] [associations]
symbol:AT3G62310 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009560 "embryo sac egg
cell differentiation" evidence=RCA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0005730 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL162507 KO:K12820
ProtClustDB:CLSN2683587 OMA:TVLQIHA EMBL:AY120782 EMBL:BT010331
IPI:IPI00540868 PIR:T48023 RefSeq:NP_191790.1 UniGene:At.34140
UniGene:At.4777 ProteinModelPortal:Q9LZQ9 SMR:Q9LZQ9 IntAct:Q9LZQ9
PaxDb:Q9LZQ9 PRIDE:Q9LZQ9 EnsemblPlants:AT3G62310.1 GeneID:825404
KEGG:ath:AT3G62310 TAIR:At3g62310 InParanoid:Q9LZQ9
PhylomeDB:Q9LZQ9 ArrayExpress:Q9LZQ9 Genevestigator:Q9LZQ9
Uniprot:Q9LZQ9
Length = 726
Score = 486 (176.1 bits), Expect = 5.8e-76, Sum P(2) = 5.8e-76
Identities = 133/424 (31%), Positives = 232/424 (54%)
Query: 575 ERPGAVLVFMTGWDDINSLKDQLQAHP-LLGDP-SRVLLLACHGSMASSEQRLIFDK-PE 631
E PG +LVF+TG ++I ++ LGD + ++ + ++ + Q+ IFD PE
Sbjct: 273 EPPGDILVFLTGEEEIEDACRKINKEVGNLGDQVGPIKVVPLYSTLPPAMQQKIFDPAPE 332
Query: 632 ---DGV---RKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXX 685
+G RKIV++TN+AETS+TI+ +V+VID G AK+ Y+ LL S ISK
Sbjct: 333 PVTEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKAS 392
Query: 686 XXXXXXXXXXVQPGECYHLYPRYVYDAFADYQL-PELLRTPLQSLCLQIKSLQLGSISEF 744
+PG+C+ LY ++ Q PE+LR+ L + L +K L + + F
Sbjct: 393 AHQRSGRAGRTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF 452
Query: 745 LSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNC 804
+ PP P ++ A+E L +GALD++ NLT G +S P++P++ KMLI+ FNC
Sbjct: 453 --DFMDPPAPETLMRALEVLNYLGALDDDGNLTKTGEIMSEFPLDPQMAKMLIVSPEFNC 510
Query: 805 LDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQS 864
+ +++V A LSV + F+ P + + A+ AKA+F + DHL L+ Y +K ++
Sbjct: 511 SNEILSVSAMLSVPNCFIRPREAQKAADEAKARFGHIE-GDHLTLLNVYHAFK---QNNE 566
Query: 865 GYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDEHL-IRAVICAG 923
+C++NF++ + +K+ D++R+Q + ++ L +T+ N S D ++ IR + AG
Sbjct: 567 DPNWCYENFINNRAMKSADNVRQQLVRIMSRFNLKMCSTD-FN--SRDYYINIRKAMLAG 623
Query: 924 LFPGLCSVVNKEKSIALKTMEDGQVL-LYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRD 982
F V + E++ T++D QV+ L+ ++ P+ W+++NE + + F+R
Sbjct: 624 YF---MQVAHLERTGHYLTVKDNQVVHLHPSNCLDHKPE----WVIYNEYVLTSRNFIRT 676
Query: 983 STGV 986
T +
Sbjct: 677 VTDI 680
Score = 350 (128.3 bits), Expect = 5.8e-76, Sum P(2) = 5.8e-76
Identities = 75/211 (35%), Positives = 115/211 (54%)
Query: 281 WQESPEGQK---MLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILES 337
W P Q+ +LE RR+LP + +++ LK ++ NQ +++ GETG GKTTQ+PQ+++++
Sbjct: 42 WNGKPYSQRYYDILEKRRTLPVWLQKEEFLKTLNNNQTLILVGETGSGKTTQIPQFVIDA 101
Query: 338 -ETEAARGAACSII-CTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLM 395
+ E + ++ CTQPRR++AM+VS RVA E +GE VGY +R E T L
Sbjct: 102 VDAETSDKRRKWLVGCTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSPRTVLK 161
Query: 396 FCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSAT 455
+ T G+ +I+DE HER + D L + MSAT
Sbjct: 162 YLTDGMLLREAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 221
Query: 456 LNAELFSSYFGGAPMLHIPGFTYPVRAYFLE 486
L AE F YF GAP++ +PG +PV ++ +
Sbjct: 222 LEAEKFQDYFSGAPLMKVPGRLHPVEIFYTQ 252
Score = 50 (22.7 bits), Expect = 2.2e-44, Sum P(2) = 2.2e-44
Identities = 15/49 (30%), Positives = 22/49 (44%)
Query: 561 FNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQLQAHPLLGDPSRV 609
F L++ VL K RP LV M+ + +D PL+ P R+
Sbjct: 200 FGLLKEVL-----KNRPDLKLVVMSATLEAEKFQDYFSGAPLMKVPGRL 243
>TAIR|locus:2065210 [details] [associations]
symbol:AT2G47250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0008380
GO:GO:0006397 GO:GO:0009941 GO:GO:0003676 EMBL:AC002337
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:AY128301 EMBL:BT004534 IPI:IPI00540033 PIR:H84912
RefSeq:NP_182247.1 UniGene:At.36388 ProteinModelPortal:O22899
SMR:O22899 PaxDb:O22899 PRIDE:O22899 EnsemblPlants:AT2G47250.1
GeneID:819338 KEGG:ath:AT2G47250 GeneFarm:1798 TAIR:At2g47250
InParanoid:O22899 KO:K12820 OMA:XEIDEAC PhylomeDB:O22899
ProtClustDB:CLSN2683587 Genevestigator:O22899 GermOnline:AT2G47250
Uniprot:O22899
Length = 729
Score = 485 (175.8 bits), Expect = 1.4e-75, Sum P(2) = 1.4e-75
Identities = 135/424 (31%), Positives = 229/424 (54%)
Query: 575 ERPGAVLVFMTGWDDINSLKDQLQAHPL-LGDP-SRVLLLACHGSMASSEQRLIFDK--- 629
E PG +LVF+TG ++I ++ LGD V ++ + ++ + Q+ IFD
Sbjct: 277 EPPGDILVFLTGEEEIEDACRKINKEVSNLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPV 336
Query: 630 P--EDGV--RKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXX 685
P E G RKIV++TN+AETS+TI+ +V+VID G AK+ Y+ LL S ISK
Sbjct: 337 PLTEGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKAS 396
Query: 686 XXXXXXXXXXVQPGECYHLYPRYVYDAFADYQL-PELLRTPLQSLCLQIKSLQLGSISEF 744
+PG+C+ LY ++ Q PE+LR+ L + L +K L + + F
Sbjct: 397 AHQRSGRAGRTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF 456
Query: 745 LSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNC 804
+ PP P ++ A+E L +GALD+ NLT G +S P++P++ KMLI+ FNC
Sbjct: 457 --DFMDPPAPETLMRALEVLNYLGALDDEGNLTKTGEIMSEFPLDPQMSKMLIVSPEFNC 514
Query: 805 LDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQS 864
+ +++V A LSV + F+ P + + A+ AKA+F D DHL L+ Y +K ++
Sbjct: 515 SNEILSVSAMLSVPNCFVRPREAQKAADEAKARFGHID-GDHLTLLNVYHAYK---QNNE 570
Query: 865 GYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDEHL-IRAVICAG 923
+C++NF++ + +K+ D++R+Q + ++ L +T+ N S D ++ IR + AG
Sbjct: 571 DPNWCFENFVNNRAMKSADNVRQQLVRIMSRFNLKMCSTD-FN--SRDYYVNIRKAMLAG 627
Query: 924 LFPGLCSVVNKEKSIALKTMEDGQVL-LYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRD 982
F V + E++ T++D QV+ L+ ++ P+ W+++NE + F+R
Sbjct: 628 YF---MQVAHLERTGHYLTVKDNQVVHLHPSNCLDHKPE----WVIYNEYVLTTRNFIRT 680
Query: 983 STGV 986
T +
Sbjct: 681 VTDI 684
Score = 348 (127.6 bits), Expect = 1.4e-75, Sum P(2) = 1.4e-75
Identities = 73/200 (36%), Positives = 109/200 (54%)
Query: 289 KMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESET--EAARGAA 346
++LE RR LP + ++D L ++ NQ +++ GETG GKTTQ+PQ++L++ + +G
Sbjct: 57 EILEKRRDLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNSDKGRK 116
Query: 347 CSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXX 406
+ CTQPRR++AM+VS RVA E +GE VGY +R E T L + T G+
Sbjct: 117 WLVGCTQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYLTDGMLLREA 176
Query: 407 XXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFG 466
+I+DE HER + D L + MSATL AE F YF
Sbjct: 177 MADPLLERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQEYFS 236
Query: 467 GAPMLHIPGFTYPVRAYFLE 486
GAP++ +PG +PV ++ +
Sbjct: 237 GAPLMKVPGRLHPVEIFYTQ 256
Score = 43 (20.2 bits), Expect = 1.7e-43, Sum P(2) = 1.7e-43
Identities = 13/49 (26%), Positives = 22/49 (44%)
Query: 561 FNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQLQAHPLLGDPSRV 609
F L++ VL + RP LV M+ + ++ PL+ P R+
Sbjct: 204 FGLLKEVL-----RNRPDLKLVVMSATLEAEKFQEYFSGAPLMKVPGRL 247
>GENEDB_PFALCIPARUM|PF10_0294 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 515 (186.3 bits), Expect = 1.4e-75, Sum P(2) = 1.4e-75
Identities = 137/448 (30%), Positives = 236/448 (52%)
Query: 557 DSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINS----LKDQLQAHPLLGDPSRVLLL 612
D + +LI + H+ E PG +LVF+TG D+IN+ L ++++ + P +++L
Sbjct: 821 DYVEASLITVLNIHL--NEHPGDILVFLTGQDEINTACEILHERMKKLESMSPPP-LIIL 877
Query: 613 ACHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNN 672
+ S+ S Q +IF+ G RK +LATN+AE S+TI+ + FVID G K YD+ +
Sbjct: 878 PIYSSLPSEMQSVIFEPAPPGCRKCILATNIAEASLTIDGIFFVIDPGFCKIKKYDSKRD 937
Query: 673 TPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVY-DAFADYQLPELLRTPLQSLCL 731
L+ + ISK PG+CY LY Y + ++ +PE+ R L S+ L
Sbjct: 938 MDSLIVAPISKANAKQRAGRAGRTGPGKCYRLYTEEAYKNEMSEMSVPEIQRINLGSIVL 997
Query: 732 QIKSLQLGSISEFLS-RALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEP 790
+K+L I++FL + P ++ +++E L +GALD+N LT LG+ ++ P+EP
Sbjct: 998 LLKAL---GINDFLHFDFMDSPSVETLIHSLENLYYLGALDDNGYLTKLGKKMANFPMEP 1054
Query: 791 KLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALV 850
L K+L+ FNC D V+T+V+ LSV++ F P +K LA+ K +F D + +
Sbjct: 1055 NLSKILLTSLNFNCTDDVVTIVSMLSVQNIFYRPQNKALLADKKKNKF-IMPQGDLITYL 1113
Query: 851 RAYDGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWS 910
Y+ WK E S Y +C +NF+ ++ LK +RKQ L + + + + + N +
Sbjct: 1114 NIYNKWK--ENSFSNY-WCHENFIQSRALKRAQDVRKQMLSIFEKYNYQVKKSTSKNDAT 1170
Query: 911 HDEHLIRAVICAGLFPGLCSVVNKEKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFN 970
++ ++ IC+G F +C ++ L T + QV ++ +S K P ++V++
Sbjct: 1171 KYVNICKS-ICSGYFNHVCKRDTQQGYTTLLTNQ--QVFIHPSSTLFN--KNPL-FVVYH 1224
Query: 971 EKIKVNSVFLRDSTGVSDSVLLLFGGNI 998
E + N ++RD T + L+ N+
Sbjct: 1225 ELVLTNKEYIRDCTIIQPQWLIQLAPNL 1252
Score = 334 (122.6 bits), Expect = 1.4e-75, Sum P(2) = 1.4e-75
Identities = 74/190 (38%), Positives = 109/190 (57%)
Query: 292 EFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESE-TEAARGAACSII 350
E R LP Y ++ L+KAI +N V++V GETG GKTTQ+PQY+ E+ TE +G +
Sbjct: 626 EQRSKLPIYNLKNDLMKAIEKNNVLIVIGETGSGKTTQIPQYLHEANYTE--KGI---VG 680
Query: 351 CTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXX 410
CTQPRR++AM++++RV+ E G LG+ VGY +R + DT + + T G+
Sbjct: 681 CTQPRRVAAMSIAKRVSEEFGCILGQEVGYSIRFDDCTSNDTIIKYLTDGMLLRETLSDT 740
Query: 411 XXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPM 470
+ +I+DE HER ++ D L + SATL+AE FS+YF +P+
Sbjct: 741 LLTKYSFIILDEAHERTISTDILFCLLKDVVRKRADFKLIVTSATLDAEKFSTYFFNSPI 800
Query: 471 LHIPGFTYPV 480
IPG +PV
Sbjct: 801 FTIPGKIFPV 810
Score = 38 (18.4 bits), Expect = 2.0e-44, Sum P(2) = 2.0e-44
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 187 SKAPLPNYRSDLDEKRPQREVILPFG 212
SK P+ N ++DL + + V++ G
Sbjct: 629 SKLPIYNLKNDLMKAIEKNNVLIVIG 654
>UNIPROTKB|Q8IJA4 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008380 "RNA splicing" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 515 (186.3 bits), Expect = 1.4e-75, Sum P(2) = 1.4e-75
Identities = 137/448 (30%), Positives = 236/448 (52%)
Query: 557 DSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINS----LKDQLQAHPLLGDPSRVLLL 612
D + +LI + H+ E PG +LVF+TG D+IN+ L ++++ + P +++L
Sbjct: 821 DYVEASLITVLNIHL--NEHPGDILVFLTGQDEINTACEILHERMKKLESMSPPP-LIIL 877
Query: 613 ACHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNN 672
+ S+ S Q +IF+ G RK +LATN+AE S+TI+ + FVID G K YD+ +
Sbjct: 878 PIYSSLPSEMQSVIFEPAPPGCRKCILATNIAEASLTIDGIFFVIDPGFCKIKKYDSKRD 937
Query: 673 TPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVY-DAFADYQLPELLRTPLQSLCL 731
L+ + ISK PG+CY LY Y + ++ +PE+ R L S+ L
Sbjct: 938 MDSLIVAPISKANAKQRAGRAGRTGPGKCYRLYTEEAYKNEMSEMSVPEIQRINLGSIVL 997
Query: 732 QIKSLQLGSISEFLS-RALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEP 790
+K+L I++FL + P ++ +++E L +GALD+N LT LG+ ++ P+EP
Sbjct: 998 LLKAL---GINDFLHFDFMDSPSVETLIHSLENLYYLGALDDNGYLTKLGKKMANFPMEP 1054
Query: 791 KLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALV 850
L K+L+ FNC D V+T+V+ LSV++ F P +K LA+ K +F D + +
Sbjct: 1055 NLSKILLTSLNFNCTDDVVTIVSMLSVQNIFYRPQNKALLADKKKNKF-IMPQGDLITYL 1113
Query: 851 RAYDGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWS 910
Y+ WK E S Y +C +NF+ ++ LK +RKQ L + + + + + N +
Sbjct: 1114 NIYNKWK--ENSFSNY-WCHENFIQSRALKRAQDVRKQMLSIFEKYNYQVKKSTSKNDAT 1170
Query: 911 HDEHLIRAVICAGLFPGLCSVVNKEKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFN 970
++ ++ IC+G F +C ++ L T + QV ++ +S K P ++V++
Sbjct: 1171 KYVNICKS-ICSGYFNHVCKRDTQQGYTTLLTNQ--QVFIHPSSTLFN--KNPL-FVVYH 1224
Query: 971 EKIKVNSVFLRDSTGVSDSVLLLFGGNI 998
E + N ++RD T + L+ N+
Sbjct: 1225 ELVLTNKEYIRDCTIIQPQWLIQLAPNL 1252
Score = 334 (122.6 bits), Expect = 1.4e-75, Sum P(2) = 1.4e-75
Identities = 74/190 (38%), Positives = 109/190 (57%)
Query: 292 EFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESE-TEAARGAACSII 350
E R LP Y ++ L+KAI +N V++V GETG GKTTQ+PQY+ E+ TE +G +
Sbjct: 626 EQRSKLPIYNLKNDLMKAIEKNNVLIVIGETGSGKTTQIPQYLHEANYTE--KGI---VG 680
Query: 351 CTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXX 410
CTQPRR++AM++++RV+ E G LG+ VGY +R + DT + + T G+
Sbjct: 681 CTQPRRVAAMSIAKRVSEEFGCILGQEVGYSIRFDDCTSNDTIIKYLTDGMLLRETLSDT 740
Query: 411 XXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPM 470
+ +I+DE HER ++ D L + SATL+AE FS+YF +P+
Sbjct: 741 LLTKYSFIILDEAHERTISTDILFCLLKDVVRKRADFKLIVTSATLDAEKFSTYFFNSPI 800
Query: 471 LHIPGFTYPV 480
IPG +PV
Sbjct: 801 FTIPGKIFPV 810
Score = 38 (18.4 bits), Expect = 2.0e-44, Sum P(2) = 2.0e-44
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 187 SKAPLPNYRSDLDEKRPQREVILPFG 212
SK P+ N ++DL + + V++ G
Sbjct: 629 SKLPIYNLKNDLMKAIEKNNVLIVIG 654
>DICTYBASE|DDB_G0291183 [details] [associations]
symbol:dhx8 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0006396 "RNA processing" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=IEA;ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0291183 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GenomeReviews:CM000154_GR GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 EMBL:AAFI02000175
InterPro:IPR022967 SMART:SM00316 KO:K12818 OMA:NAWCYEN
RefSeq:XP_635385.1 HSSP:P05055 ProteinModelPortal:Q54F05
EnsemblProtists:DDB0233399 GeneID:8628033 KEGG:ddi:DDB_G0291183
ProtClustDB:CLSZ2846610 Uniprot:Q54F05
Length = 1160
Score = 503 (182.1 bits), Expect = 3.0e-75, Sum P(3) = 3.0e-75
Identities = 128/430 (29%), Positives = 229/430 (53%)
Query: 557 DSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQL-QAHPLLGD--PSRVLLLA 613
D + +LI + H+ E PG +L+F+TG ++I++ L + LG P +++L
Sbjct: 698 DYLDASLITVMQIHL--SEPPGDILLFLTGQEEIDAACQILYERMKSLGSNVPD-LIILP 754
Query: 614 CHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNT 673
+ ++ S Q IF+ G RK+V+ATN+AETS+TI+ + +VID G +K+ ++ N
Sbjct: 755 VYSALPSEMQTKIFEPAPPGSRKVVIATNIAETSLTIDGIYYVIDPGFSKQKCFNPKNGM 814
Query: 674 PCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVY-DAFADYQLPELLRTPLQSLCLQ 732
L+ + IS+ PG+CY LY + + +PE+ RT L + L
Sbjct: 815 DSLVVAPISQAAARQRSGRAGRTGPGKCYRLYTESAFKNEMLASSIPEIQRTNLGNTVLT 874
Query: 733 IKSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKL 792
+K++ + + F + PP ++ +A+E L +GALDE LT LGR ++ P++P+L
Sbjct: 875 MKAMGINDLLNF--DFMDPPPVQTLVSAMEQLYSLGALDEEGLLTRLGRKMAEFPLDPQL 932
Query: 793 GKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRA 852
KMLI C D ++TVVA LSV++ F P +K+ LA+ KA+F + DHL L+
Sbjct: 933 SKMLIASVDLGCSDEILTVVAMLSVQNVFYRPKEKQALADQKKAKFFQPE-GDHLTLLNV 991
Query: 853 YDGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHD 912
Y+ WK+++ +C++NF+ A++L+ +RKQ + ++ DR + +
Sbjct: 992 YESWKNSKFSNP---WCFENFVQARSLRRAQDVRKQLITIM------DRYKLDIISAGRN 1042
Query: 913 EHLIRAVICAGLFPGLCSVVNKEKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFNEK 972
I+ IC+G F + K+ + KT+ +GQ + Y + + + P W++++E
Sbjct: 1043 YTKIQKAICSGFF---ANASKKDPNEGYKTLVEGQPV-YIHPSSTLFNRNP-DWVIYHEL 1097
Query: 973 IKVNSVFLRD 982
+ ++R+
Sbjct: 1098 VMTTKEYMRE 1107
Score = 345 (126.5 bits), Expect = 3.0e-75, Sum P(3) = 3.0e-75
Identities = 81/189 (42%), Positives = 107/189 (56%)
Query: 292 EFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIIC 351
E R SLP + R+A L+A+SE+Q++VV GETG GKTTQ+ QY+ EA G I C
Sbjct: 503 EQRESLPIFPLREAFLQAVSEHQLLVVIGETGSGKTTQMAQYL----AEAGYGTRGKIGC 558
Query: 352 TQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXX 411
TQPRR++AM+VS+RVA E G +LG+ VGY +R E +T + F T GI
Sbjct: 559 TQPRRVAAMSVSKRVAEEFGCQLGQEVGYAIRFEDCTSPETIIKFMTDGILLRECLLDPN 618
Query: 412 XXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPML 471
+ +I+DE HER ++ D L + SATL AE FS YF A +
Sbjct: 619 LSAYSVIILDEAHERTISTDVLFGLLKQALQRRPELKVLITSATLEAEKFSKYFMNAQLF 678
Query: 472 HIPGFTYPV 480
IPG T+PV
Sbjct: 679 IIPGRTFPV 687
Score = 43 (20.2 bits), Expect = 3.0e-75, Sum P(3) = 3.0e-75
Identities = 22/90 (24%), Positives = 38/90 (42%)
Query: 215 REVDAHLKAYLSQKYINASMSSLSNVGSTTNDEGLYEQQEQLVQNSVVRERILRQRSLQM 274
RE+D K + K + +SS+++ G EG+ +++ LV S +IL R+
Sbjct: 193 REID---KEPILYKIYDGKVSSINDYGCFVTLEGIAGRRDGLVHIS----QILSGRTKLN 245
Query: 275 HEKQQAWQESPEGQKMLEFRRSLPSYKERD 304
H + K+L S S +D
Sbjct: 246 HPSDVVKRNQQVKVKILSVASSKISLSMKD 275
Score = 39 (18.8 bits), Expect = 1.3e-25, Sum P(3) = 1.3e-25
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 698 PGECYHLYPRYVYDAFADYQLPELLRTPLQ 727
PG + + RY D ADY L L T +Q
Sbjct: 681 PGRTFPVDIRYTKDPEADY-LDASLITVMQ 709
>ZFIN|ZDB-GENE-030131-8589 [details] [associations]
symbol:dhx16 "DEAH (Asp-Glu-Ala-His) box
polypeptide 16" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0035987
"endodermal cell differentiation" evidence=IMP] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-8589 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
GO:GO:0035987 EMBL:BC045393 IPI:IPI00495801 RefSeq:NP_956318.1
UniGene:Dr.76186 ProteinModelPortal:Q7ZVV8 STRING:Q7ZVV8
PRIDE:Q7ZVV8 GeneID:336645 KEGG:dre:336645 InParanoid:Q7ZVV8
NextBio:20811846 ArrayExpress:Q7ZVV8 Bgee:Q7ZVV8 Uniprot:Q7ZVV8
Length = 1054
Score = 466 (169.1 bits), Expect = 1.3e-74, Sum P(2) = 1.3e-74
Identities = 131/425 (30%), Positives = 216/425 (50%)
Query: 575 ERPGAVLVFMTGWDDINSLKDQLQAH-PLLGDP-SRVLLLACHGSMASSEQRLIFDKPED 632
+ PG VLVF+TG ++I + + LQ LG S +L+L + ++ S Q IF+
Sbjct: 619 QSPGDVLVFLTGQEEIEACCELLQERCRRLGSKISELLVLPIYANLPSDMQAKIFNPTPP 678
Query: 633 GVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXX 692
G RK+V+ATN+AETS+TI+ +++VID G K+ SY+A L+ + S+
Sbjct: 679 GARKVVVATNIAETSLTIDGIIYVIDPGFCKQKSYNAKTGMESLIVTPCSRASANQRAGR 738
Query: 693 XXXVQPGECYHLYPRYVYD-AFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQP 751
V G+C+ LY + + + +PE+ RT L ++ L +KSL + + F + P
Sbjct: 739 AGRVAAGKCFRLYTAWAFKHEMEETTVPEIQRTNLGNVVLLLKSLGINDLIHF--DFMDP 796
Query: 752 PEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTV 811
P ++ A+E L +GAL+ LT LGR ++ LPV+P L KM++ + C + V+T+
Sbjct: 797 PPHETLVLALEQLYALGALNHLGELTKLGRRMAELPVDPMLSKMILASEQYKCSEEVLTI 856
Query: 812 VAGLSVRDP-FLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGY--EY 868
A LSV + F P DK A++A+ F DHL L+ Y W + SGY ++
Sbjct: 857 AAMLSVNNSIFYRPKDKVVHADNARMNFVVPG-GDHLVLLNVYTQWVE-----SGYSTQW 910
Query: 869 CWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDR-NTENCNKWSHDEHLIRAVICAGLFPG 927
C++NF+ +++K +R Q GL+DR E C+ + D IR + AG F
Sbjct: 911 CFENFIQFRSMKRARDVRDQL------EGLMDRIEVELCSS-NGDSMPIRKAVTAGYF-- 961
Query: 928 LCSVVNKEKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVS 987
K KT++ Q + Y + ++ + P W++++E + F+R +
Sbjct: 962 -YHTARLSKG-GYKTVKHQQTV-YVHPNSSLFEEQPR-WMIYHELVFTTKEFMRQVIEIE 1017
Query: 988 DSVLL 992
LL
Sbjct: 1018 SGWLL 1022
Score = 373 (136.4 bits), Expect = 1.3e-74, Sum P(2) = 1.3e-74
Identities = 112/352 (31%), Positives = 167/352 (47%)
Query: 147 KDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNYRSDLDEKR---- 202
KDE+ + S R+ + L T + +++Y K + N +EKR
Sbjct: 253 KDEEYLFSTQNLTDRERKDLEYKRTIRDM-AKEYKKAGAKEQEERKNRYYMPEEKRNKSI 311
Query: 203 PQREVILPFGLL-REVDAHLKAYLSQKYINASMSSLSNVGSTTNDEG-LYEQQE--QLVQ 258
PQ+++ L F RE + + A++ G+ E + E+QE QL+
Sbjct: 312 PQKDMDLEFEETPREGGGEQGRWEEARVATATLQ----FGARQERERRIKEEQERYQLIL 367
Query: 259 N-----SVVRERILRQRSLQMHEKQ-QAWQESPEGQKMLEFRRSLPSYKERDALLKAISE 312
+ V I + +L E + + Q + Q + E RRSLP + R+ LL AI +
Sbjct: 368 EEEEMITFVSTAITMKGTLSEKESEPELSQAEKQKQSIQEVRRSLPIFPYREDLLAAIGD 427
Query: 313 NQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGE 372
+Q++V+ GETG GKTTQ+PQY+LE E I CTQPRR++AM+V+ RVA E
Sbjct: 428 HQILVIEGETGSGKTTQIPQYLLE---EGYTKGGMKIGCTQPRRVAAMSVAARVAQEMSV 484
Query: 373 KLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDF 432
KLG VGY +R E T L + T G+ + +I+DE HER ++ D
Sbjct: 485 KLGNEVGYSIRFEDCTSERTILKYMTDGMLLREFLTEPDLASYSVIIIDEAHERTLHTDI 544
Query: 433 LLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYF 484
L + SATL+ E FSS+F AP+ IPG +PV Y+
Sbjct: 545 LFGLIKDIARFRPDLKVLVASATLDTERFSSFFDDAPVFRIPGRRFPVDIYY 596
Score = 46 (21.3 bits), Expect = 3.4e-40, Sum P(2) = 3.4e-40
Identities = 26/89 (29%), Positives = 41/89 (46%)
Query: 468 APMLHIPGFTYPVRAYFLENILEMTRYRLNTYNQIDDY----------GQEKSWKMQ--- 514
AP H+ P RA ++EM R + TY ++D G+EK K +
Sbjct: 67 APKKHV--VEKPARA-IERQVMEMER-KNRTYTLLEDSESDGEAAREGGKEKKSKERDKG 122
Query: 515 KQALALR-KRKSSIASAVEDALEAADFRE 542
K+ LR KR S +S+ ED ++ F++
Sbjct: 123 KKRKHLRQKRDESPSSSEEDKKKSITFKD 151
>ZFIN|ZDB-GENE-030131-650 [details] [associations]
symbol:dhx15 "DEAH (Asp-Glu-Ala-His) box
polypeptide 15" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-650 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 EMBL:CU651678 IPI:IPI00481686
RefSeq:NP_001108613.1 UniGene:Dr.4024 Ensembl:ENSDART00000081245
GeneID:321931 KEGG:dre:321931 NextBio:20807587 Uniprot:E7F3I8
Length = 769
Score = 508 (183.9 bits), Expect = 2.0e-74, Sum P(2) = 2.0e-74
Identities = 133/430 (30%), Positives = 234/430 (54%)
Query: 574 KERPGAVLVFMTGWDDINSLKDQLQAH-PLLG-DPSRVLLLACHGSMASSEQRLIFD--- 628
+E G VL+F+TG ++I+ +++ LG D + ++ + ++ +Q+ IF+
Sbjct: 320 EEDEGDVLLFLTGQEEIDEACKRIKREIDDLGPDVGDIKIIPLYSTLPPQQQQRIFEPPP 379
Query: 629 --KPEDGV-RKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXX 685
KP + RK+V++TN+AETS+TI+ VVFVID G AK+ Y+ LL + ISK
Sbjct: 380 PRKPNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKAS 439
Query: 686 XXXXXXXXXXVQPGECYHLYPRYVYDA-FADYQLPELLRTPLQSLCLQIKSLQLGSISEF 744
+PG+C+ LY Y D PE+LR+ L S+ LQ+K L + + F
Sbjct: 440 AQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHF 499
Query: 745 LSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNC 804
+ PP P ++ A+E L + AL+++ +LT LG ++ P++P+L KM+I FNC
Sbjct: 500 --DFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDFNC 557
Query: 805 LDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQS 864
+ V+++ A LSV F+ P + K A+ +K +F+ D DHL L+ Y +K + H+S
Sbjct: 558 SNEVLSITAMLSVPQCFVRPTEAKKAADESKMRFAHID-GDHLTLLNVYHAFK--QNHES 614
Query: 865 GYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDEHL-IRAVICAG 923
++C+ NF++ ++L + D++R+Q ++ L R+TE S D ++ IR + G
Sbjct: 615 -VQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTEFT---SRDYYINIRRALVTG 670
Query: 924 LFPGLCSVVNKEKSIALKTMEDGQVL-LYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRD 982
F V + E++ T++D QV+ L+ ++V P+ W+++NE + ++R
Sbjct: 671 FF---MQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPE----WVLYNEFVLTTKNYIRT 723
Query: 983 STGVSDSVLL 992
T + L+
Sbjct: 724 CTDIKPEWLV 733
Score = 314 (115.6 bits), Expect = 2.0e-74, Sum P(2) = 2.0e-74
Identities = 75/231 (32%), Positives = 117/231 (50%)
Query: 257 VQNSVVRERILRQRSLQMHEKQQAWQE---SPEGQKMLEFRRSLPSYKERDALLKAISEN 313
+ +SV IL + MH++ + +P ++L+ R LP ++ ++ ++ +
Sbjct: 68 LSSSVSGSGILPLKQASMHQQINPFTNLPHTPRYYEILKKRLQLPVWEYKERFNDILNRH 127
Query: 314 QVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEK 373
Q V+ GETG GKTTQ+PQ+ ++ + G + CTQPRR++AM+V++RVA E
Sbjct: 128 QSFVLVGETGSGKTTQIPQWCVDM-VRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVM 186
Query: 374 LGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFL 433
LG+ VGY +R E T L + T G+ +I+DE HER + D L
Sbjct: 187 LGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDIL 246
Query: 434 LIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYF 484
+ V MSATL+A F YF P+L IPG T+PV ++
Sbjct: 247 MGVLKEVVRQRSDLKVIVMSATLDAGKFQVYFDNCPLLTIPGRTHPVEIFY 297
>UNIPROTKB|I3LCY3 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
[GO:0009615 "response to virus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009615
GO:GO:0003725 GO:GO:0004386 GO:GO:0043330
GeneTree:ENSGT00550000074257 EMBL:FP312685
Ensembl:ENSSSCT00000023601 Uniprot:I3LCY3
Length = 987
Score = 747 (268.0 bits), Expect = 5.1e-74, P = 5.1e-74
Identities = 180/494 (36%), Positives = 270/494 (54%)
Query: 456 LNAELFSSYFGGAPMLHIPGFTYPVRAYFLENILEMTRYR-LNTYNQIDDYGQEKSWKMQ 514
LN +F +G ML + Y V + L+ ++ R ++ D+ + +
Sbjct: 351 LNMIVFQLTYGNCSMLGFMQWLYSVEQFSLQGVIAQKRINFVDIREMFKDWFHQYFFGFP 410
Query: 515 KQALALRKRKSSIASAVEDALEAADFREYSVQTQQSLSCWNPDSIGFNLIEHVLCHIVKK 574
+ L KRK I + A F + + +++ LI V H
Sbjct: 411 NEKLKEEKRKLLIPEIDKRASGVELFSFFCKKKKKN-----------RLISSVWWHGQLT 459
Query: 575 ERPGAVLVFMTGWDDINSLKDQLQAHPLLGDPSRVLLLACHGSMASSEQRLIFDKPEDGV 634
P ++ + GW I L + A + + ++ H ++ +F + GV
Sbjct: 460 VIPLPMIRPLPGWLVI--LTYMVSA--FVKNRKFKIIFKYHSNLCYLNILQVFKRTPPGV 515
Query: 635 RKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXX 694
RKIV+ATN+AETSITI+DVV+VID GK KET +D NN + W+SK
Sbjct: 516 RKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAG 575
Query: 695 XVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPEP 754
VQPG CYHLY DYQLPE+LRTPL+ LCLQIK L+LG I+ FLSR + PP
Sbjct: 576 RVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSN 635
Query: 755 LSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAG 814
+V +I++L + ALD+ E LT LG +L+ LPVEP +GKM++ GA+F CLDPV+T+ A
Sbjct: 636 EAVSLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAAS 695
Query: 815 LSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYE--YCWKN 872
LS +DPF++P K+ +A++ + + + SDHL +V A++GW++A R YE YCW+
Sbjct: 696 LSFKDPFVIPLGKEKVADARRKELAKDTKSDHLTVVNAFEGWEEARRRGFRYEKDYCWEY 755
Query: 873 FLSAQTLKAIDSLRKQFLFLLKDAGLV-DRNTEN--CNKWSHDEHLIRAVICAGLFPGLC 929
FLS+ TL+ + +++ QF L AG V RN ++ N S +E +I+AVICAGL+P +
Sbjct: 756 FLSSNTLQMLHNMKGQFAEHLLGAGFVRSRNPKDPESNINSDNEKIIKAVICAGLYPKVA 815
Query: 930 SV---VNKEKSIAL 940
+ + K++ I L
Sbjct: 816 KIRLNLGKKRKIFL 829
Score = 150 (57.9 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 48/150 (32%), Positives = 79/150 (52%)
Query: 867 EYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLV-DRNTEN--CNKWSHDEHLIRAVICAG 923
+YCW+ FLS+ TL+ + +++ QF L AG V RN ++ N S +E +I+AVICAG
Sbjct: 750 DYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVRSRNPKDPESNINSDNEKIIKAVICAG 809
Query: 924 LFPGLCSV---VNKEKSIAL-----------KTMEDGQVLLYSNSVNAGVPKIPYPWLVF 969
L+P + + + K++ I L +T ++ LYS ++ + + + F
Sbjct: 810 LYPKVAKIRLNLGKKRKIFLIHVPKSTDDLIETKQNKYKYLYSFAIMGRLYEKNV--VFF 867
Query: 970 NEKIKVNSVFLRDSTGVSDSVLLLFGGNIS 999
+ ++L D T VS LL FGG+IS
Sbjct: 868 GLMLCFGLIYLYDCTEVSPYCLLFFGGDIS 897
>POMBASE|SPBC1711.17 [details] [associations]
symbol:prp16 "ATP-dependent RNA helicase Prp16
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005681 "spliceosomal
complex" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC1711.17 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K12815 GO:GO:0000350 OMA:PSRSTWE PIR:T39724 RefSeq:NP_595890.2
ProteinModelPortal:Q9P774 IntAct:Q9P774 EnsemblFungi:SPBC1711.17.1
GeneID:2540006 KEGG:spo:SPBC1711.17 OrthoDB:EOG4GQTD2
NextBio:20801149 Uniprot:Q9P774
Length = 1173
Score = 464 (168.4 bits), Expect = 6.7e-74, Sum P(3) = 6.7e-74
Identities = 126/426 (29%), Positives = 220/426 (51%)
Query: 578 GAVLVFMTGWDDINS----LKDQLQAHPLLGDPSRVLLLACHGSMASSEQRLIFDKPEDG 633
G +LVFMTG +DI + + D+L L D R+ +L + M + Q IFD E G
Sbjct: 701 GDILVFMTGQEDIEATCEIIADRLNQ---LHDAPRLSILPIYSQMPADLQAKIFDSAEPG 757
Query: 634 VRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXX 693
VRK+V+ATN+AETS+T++ + +V+D G K Y++ L + IS+
Sbjct: 758 VRKVVVATNIAETSLTVHGISYVVDTGYCKLKMYNSKLGIDTLQVTPISQANANQRAGRA 817
Query: 694 XXVQPGECYHLYPR--YVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQP 751
PG Y LY Y+ + F + LPE+ RT L + L +KSL + IS+F +P
Sbjct: 818 GRTGPGIAYRLYTEMAYIREMF-ETTLPEIQRTNLSNTVLILKSLGVEEISDF-DFMDRP 875
Query: 752 PEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTV 811
P + + E L +GALD LT LG+ +S+ P++P L K++I+ + C + ++T+
Sbjct: 876 PNDTLMASLYE-LWTLGALDNFGKLTTLGKKMSLFPMDPSLSKLIIIAEDYKCTEEIITI 934
Query: 812 VAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYEYCWK 871
V+ LSV F P ++ + +++A+ +F+ + SDHL L+ Y W +R+ +C K
Sbjct: 935 VSMLSVPSVFYRPKERAEESDAAREKFNVPE-SDHLMLLNIYQHW---QRNGYSNSWCSK 990
Query: 872 NFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDEHLIRAVICAGLFPGLCSV 931
+FL ++TLK +R+Q + ++ + + E+ + W ++R V+C+ F
Sbjct: 991 HFLHSKTLKRARDIRQQLVEIMSKQKI---SLESVSDWD----IVRRVLCSAYFHQAACA 1043
Query: 932 VNKEKSIALKTMEDGQVL-LYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVSDSV 990
+ + L++ G L+ S G+ +P +++++E + + ++ T V
Sbjct: 1044 KGIGEYVHLRS---GMPCHLHVTSSLYGLGYLP-DYVIYHELVLTSKEYMNIVTSVDPYW 1099
Query: 991 LLLFGG 996
L FGG
Sbjct: 1100 LAEFGG 1105
Score = 374 (136.7 bits), Expect = 6.7e-74, Sum P(3) = 6.7e-74
Identities = 92/258 (35%), Positives = 139/258 (53%)
Query: 227 QKYINASMSSLSNVGSTTNDEGLYEQQEQLVQNSVVRERILRQRSLQMHEKQQAWQESPE 286
QK +A+ +SL+ S N GL + ++ + ++ RS Q ++K + +
Sbjct: 428 QKAASAA-TSLAGT-SLGNVMGLKDSNDEDAKAGTTPVKVAG-RSEQSNKKDTEFARTKS 484
Query: 287 GQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAA 346
++ EF LP++ R+ LL I +NQV++V GETG GKTTQL Q++ E G
Sbjct: 485 YREQREF---LPAFAVREQLLSVIRDNQVLIVVGETGSGKTTQLAQFLYEDGYHR-NGM- 539
Query: 347 CSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXX 406
I CTQPRR++AM+V++RV+ E G +LG +VGY +R E + G DT + + T G+
Sbjct: 540 --IGCTQPRRVAAMSVAKRVSEEMGVRLGSTVGYSIRFEDVTGPDTVIKYMTDGVLLRES 597
Query: 407 XXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFG 466
+ +I+DE HER +N D L+ + SAT+N++ FS +FG
Sbjct: 598 LMQNNLEKYSVIIMDEAHERSLNTDILMGLLKKVLSRRRDIKLLVTSATMNSQKFSDFFG 657
Query: 467 GAPMLHIPGFTYPVRAYF 484
GAP IPG TYPV F
Sbjct: 658 GAPQFTIPGRTYPVDIMF 675
Score = 58 (25.5 bits), Expect = 7.4e-41, Sum P(3) = 7.4e-41
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 142 MLLRNKDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNY 194
+L R +D + +V+ A + + F A + + R Y ++F+KAP +Y
Sbjct: 631 VLSRRRDIKLLVTSATMNSQKFSDFFGGAPQFTIPGRTYPVDIMFAKAPCSDY 683
Score = 44 (20.5 bits), Expect = 6.7e-74, Sum P(3) = 6.7e-74
Identities = 15/50 (30%), Positives = 21/50 (42%)
Query: 86 WKA--VSYPLLEQQTSNYGRYAYQDESSD-DSDREFGSTQQQMCGSTLDN 132
W A V YP E S R +++E + D D S Q + G + N
Sbjct: 257 WDARDVEYPE-EDPESKADRQRWEEEQAHLDRDWYMNSESQNLLGDEVHN 305
>UNIPROTKB|F5H658 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
HGNC:HGNC:2749 EMBL:AC068675 EMBL:AC087650 IPI:IPI01010550
ProteinModelPortal:F5H658 SMR:F5H658 Ensembl:ENST00000540306
UCSC:uc010wig.2 ArrayExpress:F5H658 Bgee:F5H658 Uniprot:F5H658
Length = 1181
Score = 505 (182.8 bits), Expect = 9.5e-74, Sum P(3) = 9.5e-74
Identities = 127/396 (32%), Positives = 210/396 (53%)
Query: 557 DSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQL-QAHPLLG-DPSRVLLLAC 614
D + +LI + H+ E PG +LVF+TG ++I++ + L + LG D +++L
Sbjct: 755 DYLDASLITVMQIHLT--EPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPV 812
Query: 615 HGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTP 674
+ ++ S Q IFD G RK+V+ATN+AETS+TI+ + +V+D G K+ Y++
Sbjct: 813 YSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGID 872
Query: 675 CLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVY-DAFADYQLPELLRTPLQSLCLQI 733
L+ + IS+ PG+CY LY Y D +PE+ RT L S L +
Sbjct: 873 QLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSL 932
Query: 734 KSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLG 793
K++ + + F P E L A+E L +GALD+ LT LGR ++ P+EP L
Sbjct: 933 KAMGINDLLSFDFMDAPPMETLIT--AMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLC 990
Query: 794 KMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAY 853
KMLI+ C + ++T+V+ LSV++ F P DK+ LA+ KA+F + DHL L+ Y
Sbjct: 991 KMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTE-GDHLTLLAVY 1049
Query: 854 DGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDE 913
+ WK+ ++ +C++NF+ A++L+ +RKQ L G++DR+ +
Sbjct: 1050 NSWKN---NKFSNPWCYENFIQARSLRRAQDIRKQML------GIMDRHKLDVVSCGKST 1100
Query: 914 HLIRAVICAGLFPGLCSVVNKEKSIALKTMEDGQVL 949
++ IC+G F + K+ +T+ D QV+
Sbjct: 1101 VRVQKAICSGFFR---NAAKKDPQEGYRTLIDQQVV 1133
Score = 332 (121.9 bits), Expect = 9.5e-74, Sum P(3) = 9.5e-74
Identities = 76/195 (38%), Positives = 111/195 (56%)
Query: 290 MLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSI 349
+LE R SLP YK ++ L++A+ +NQ+++V GETG GKTTQ+ QY+ E+ +RG I
Sbjct: 558 ILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGY-TSRG---KI 613
Query: 350 ICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXX 409
CTQPRR++AM+V++RV+ E G LG+ VGY +R E +T + + T G+
Sbjct: 614 GCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLID 673
Query: 410 XXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAP 469
+++DE HER ++ D L + SATL+A FS YF AP
Sbjct: 674 PDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAP 733
Query: 470 MLHIPGFTYPVRAYF 484
+ IPG TYPV +
Sbjct: 734 IFTIPGRTYPVEILY 748
Score = 44 (20.5 bits), Expect = 4.2e-44, Sum P(2) = 4.2e-44
Identities = 12/50 (24%), Positives = 23/50 (46%)
Query: 145 RNKDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNY 194
+ +D + +V+ A D F Q A + R Y ++++K P +Y
Sbjct: 707 KRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDY 756
Score = 40 (19.1 bits), Expect = 9.5e-74, Sum P(3) = 9.5e-74
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 231 NASMSSLSNVGSTTNDEGLYEQQEQLVQNSVVR 263
N ++S+ G EGL ++ E LV S +R
Sbjct: 269 NGKVTSIMQFGCFVQLEGLRKRWEGLVHISELR 301
>SGD|S000004411 [details] [associations]
symbol:YLR419W "Putative helicase with limited sequence
similarity to human Rb protein" species:4932 "Saccharomyces
cerevisiae" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00591 SMART:SM00847
SGD:S000004411 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
EMBL:BK006945 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:U20162
RefSeq:NP_013525.3 GeneID:851140 KEGG:sce:YLR421C KO:K06691
HOGENOM:HOG000167651 OMA:GWARIGV OrthoDB:EOG4Z65WS
RefSeq:NP_013523.3 GeneID:851137 KEGG:sce:YLR419W PIR:S59384
ProteinModelPortal:Q06698 SMR:Q06698 IntAct:Q06698
MINT:MINT-2492948 STRING:Q06698 PaxDb:Q06698 PeptideAtlas:Q06698
PRIDE:Q06698 EnsemblFungi:YLR419W CYGD:YLR419w
GeneTree:ENSGT00680000101018 NextBio:967890 Genevestigator:Q06698
GermOnline:YLR419W Uniprot:Q06698
Length = 1435
Score = 433 (157.5 bits), Expect = 1.8e-73, Sum P(3) = 1.8e-73
Identities = 125/426 (29%), Positives = 228/426 (53%)
Query: 522 KRKSSIASAVEDALEAADFREYSVQTQQSLSCWNPDSIGFNLIEHVLCHIVKKERP---- 577
KR+ ++ S +D+++ + + ++ + + I ++L+ V+ ++ K+ +
Sbjct: 805 KREKAL-SYDDDSVDERNNDDQYLKPRADSKFFTSGQINYDLLCQVVEYVHKRLKAANDN 863
Query: 578 GAVLVFMTGWDDINSLKDQLQAHPLLGDPSRVLLLACHGSMASSEQRLIFDKPEDGVRKI 637
G+++VF+ G +IN + L A+ + + ++L H ++ +Q+ +F K G RK+
Sbjct: 864 GSIIVFLPGVGEINKCCNLL-ANK--SNEADFMVLPLHSALTPEDQKRVFKKYH-GKRKV 919
Query: 638 VLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXXXVQ 697
V++TN+AETSITI+D V ID G+AK Y+ +NT L+ S+ISK V+
Sbjct: 920 VVSTNIAETSITIDDCVATIDTGRAKSMFYNPKDNTTKLIESFISKAEVKQRRGRAGRVR 979
Query: 698 PGECYHLYPRYVYDA-FADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQ-PPEPL 755
G Y L+ + +Y+ +PE+ R PL+SL L +K++ + + FLS AL PP P
Sbjct: 980 EGLSYKLFSKNLYENDMISMPIPEIKRIPLESLYLSVKAMGIKDVKAFLSTALDAPPLP- 1038
Query: 756 SVKNAIEYLQIIGALDENE-NLTVLGRNLSMLPV-EPKLGKMLILGAIFNCLD-PVMTV- 811
+++ A L IG +DE++ +LT LG+ +S++PV + K GK+LI G +F C D V+ V
Sbjct: 1039 ALQKAERILTTIGLVDESDKSLTQLGQFISLMPVMDSKHGKLLIYGILFGCTDISVLLVS 1098
Query: 812 VAGLSVRDPFLMPFDKKDLAESAKAQFSAR-DYSDHLALVRAYDGWKDAERHQSGYEYCW 870
+ G+ V PF+ F+ ++ + ++ +R D L +VR Y KD+ + +Y
Sbjct: 1099 ILGIGVL-PFIGGFENREKIKKLLCKYESRGDLFAVLEIVRDYFKIKDSSIKR---KYLR 1154
Query: 871 KNFLSAQTLKAIDSLRKQFLFLLKDAGLV--DRNTENCNKWSHDEH---LIRAVICAGLF 925
N LS + I S Q+ +LKD G + D + + + +E ++RA++ +
Sbjct: 1155 DNLLSYNKINEIKSSTAQYYSILKDVGFLPMDYKVGSISDLNRNERNFDILRAILTGAFY 1214
Query: 926 PGLCSV 931
P + V
Sbjct: 1215 PHIARV 1220
Score = 370 (135.3 bits), Expect = 1.8e-73, Sum P(3) = 1.8e-73
Identities = 78/215 (36%), Positives = 122/215 (56%)
Query: 283 ESPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILES-ETEA 341
+S E + M R LP++K++ ++ I++N+VV+++GETG GK+TQ+ Q+IL+ + E
Sbjct: 590 KSSEYKSMQLVREQLPAWKKQKVIIDIINKNEVVLITGETGSGKSTQVVQFILDFLQKEK 649
Query: 342 ARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGI 401
I+CTQPRRISA+ ++ERV+ ER GE VGY +R TR+ F TTG+
Sbjct: 650 GDFGKTKIVCTQPRRISAIGLAERVSDERCVTCGEEVGYVIRGVNKTKASTRIKFMTTGV 709
Query: 402 XXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELF 461
T V++DE+HER ++ D ++ + MSAT+N +LF
Sbjct: 710 LVRLLQNARTMLENTIVVIDEVHERSIDTDLIVTLMKNLLHRVRGMKIVLMSATVNVDLF 769
Query: 462 SSYFGGAPMLHIPGFTYPVRAYFLENILEMTRYRL 496
+F G HI G T+P+ YFLE+IL +++
Sbjct: 770 KKFFPGLATCHIEGRTFPITDYFLEDILSDLDFKI 804
Score = 82 (33.9 bits), Expect = 1.8e-73, Sum P(3) = 1.8e-73
Identities = 24/68 (35%), Positives = 36/68 (52%)
Query: 943 MEDGQVLLYSNSVNAGVPKIP----YPWLVFNEKIKVNSVFLRDSTGVSDSVLLLFGGNI 998
+ED ++L + + KIP YP+++F N ++LRD T + LLLFGG I
Sbjct: 1299 LEDAKLLSEVDGPISRQSKIPTVVKYPFVLFTTSQVTNKLYLRDLTPTTTLSLLLFGGAI 1358
Query: 999 SR--GGLV 1004
S GG +
Sbjct: 1359 SYDIGGTI 1366
Score = 37 (18.1 bits), Expect = 1.1e-38, Sum P(3) = 1.1e-38
Identities = 5/13 (38%), Positives = 8/13 (61%)
Query: 545 VQTQQSLSCWNPD 557
V +S+ CWN +
Sbjct: 419 VSETESIECWNQE 431
Score = 37 (18.1 bits), Expect = 3.3e-28, Sum P(2) = 3.3e-28
Identities = 7/20 (35%), Positives = 15/20 (75%)
Query: 500 NQIDDYGQEKSWKMQKQALA 519
+QID+ G +K+ K+ ++ +A
Sbjct: 1413 SQIDNSGADKTLKIVEKIIA 1432
>CGD|CAL0000153 [details] [associations]
symbol:orf19.1687 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0000153 GO:GO:0005524 GO:GO:0003676 EMBL:AACQ01000014
EMBL:AACQ01000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12820 RefSeq:XP_721644.1
RefSeq:XP_721764.1 STRING:Q5AJA5 GeneID:3636669 GeneID:3636709
KEGG:cal:CaO19.1687 KEGG:cal:CaO19.9255 Uniprot:Q5AJA5
Length = 767
Score = 457 (165.9 bits), Expect = 2.8e-73, Sum P(2) = 2.8e-73
Identities = 128/436 (29%), Positives = 230/436 (52%)
Query: 575 ERPGAVLVFMTGWDDINSL--KDQLQAHPLLGD----PSRVLLLACHGSMASSEQRLIFD 628
E G +L+F+TG ++I K L+ L+ + P +V L +GS+ +Q+ IF+
Sbjct: 302 EGEGDILLFLTGEEEIEDACRKISLEGDELVREQNCGPLKVYPL--YGSLPPHQQQKIFE 359
Query: 629 ----KPE-DGV--RKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWI 681
P +G RK++++TN+AETS+TI+ +V+V+D G +K+ Y+ LL S I
Sbjct: 360 PAPTNPNPNGRPGRKVIISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRVRVESLLVSPI 419
Query: 682 SKXXXXXXXXXXXXVQPGECYHLYPRYVYDA-FADYQLPELLRTPLQSLCLQIKSLQLGS 740
SK +PG+C+ LY + + PE+LR+ L S L++K L +
Sbjct: 420 SKASAQQRAGRAGRTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDD 479
Query: 741 ISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGA 800
+ F + PP P ++ A+E L + L + +LT LGR S P++P L MLI
Sbjct: 480 LVHF--DFMDPPAPETMMRALEELNYLQCLSDEGDLTALGRLASQFPLDPMLAVMLIGSP 537
Query: 801 IFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAE 860
++C + ++T+VA LSV + F+ P + A+ AK F+ D DHL L+ Y+ + E
Sbjct: 538 AYSCSEEILTIVAMLSVPNVFVRPASARKRADEAKLSFAQAD-GDHLTLINVYEAFISPE 596
Query: 861 RHQSG-YEYCWKNFLSAQTLKAIDSLRKQFLFLLK--DAGLVDRNTENCNKWSHDEHLIR 917
+ G +++C NFLS ++L + ++R Q L++ D L+ + + +++ + E++ +
Sbjct: 597 ASEIGTHKWCRDNFLSYRSLTSAKNVRNQLQRLMQKYDLQLISQYNQ-VSEFEYWENVKK 655
Query: 918 AVICAGLFPGLCSVVNKEKSIALKTMEDGQ-VLLYSNSVNAGVPKIPYPWLVFNEKIKVN 976
A++ AG F + + K T++D Q VL++ ++V + + WL++NE + +
Sbjct: 656 ALV-AGFFMQVAKKKSGNKGYL--TVKDNQDVLIHPSTVLSKEGE----WLIYNEFVLTS 708
Query: 977 SVFLRDSTGVSDSVLL 992
++R T V L+
Sbjct: 709 KNYIRTVTVVKPEWLV 724
Score = 361 (132.1 bits), Expect = 2.8e-73, Sum P(2) = 2.8e-73
Identities = 77/195 (39%), Positives = 108/195 (55%)
Query: 290 MLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSI 349
+L+ RR LP + +R+ LK Q++V GETG GKTTQ+PQ++L E G +
Sbjct: 87 ILKTRRDLPVHAQREEFLKIFHSTQIMVFVGETGSGKTTQIPQFVLYDEMPHLTGK--QV 144
Query: 350 ICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXX 409
CTQPRR++AM+V+ RVA E +LGE VGY +R E G T L + T G+
Sbjct: 145 ACTQPRRVAAMSVAARVADEMDVELGEEVGYNIRFENNSGPKTILKYMTDGMLLREAMED 204
Query: 410 XXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAP 469
+ +I+DE HER + D L+ + MSATL+AE F +YF AP
Sbjct: 205 HDLTRYSCIILDEAHERTLATDILMGLLKQVSVRRPDLKIIIMSATLDAEKFQNYFNNAP 264
Query: 470 MLHIPGFTYPVRAYF 484
+L +PG T+PV Y+
Sbjct: 265 LLAVPGRTHPVEIYY 279
Score = 41 (19.5 bits), Expect = 1.3e-39, Sum P(2) = 1.3e-39
Identities = 10/37 (27%), Positives = 15/37 (40%)
Query: 572 VKKERPGAVLVFMTGWDDINSLKDQLQAHPLLGDPSR 608
V RP ++ M+ D ++ PLL P R
Sbjct: 235 VSVRRPDLKIIIMSATLDAEKFQNYFNNAPLLAVPGR 271
>DICTYBASE|DDB_G0285937 [details] [associations]
symbol:dhx16 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR002483 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01480
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285937 GO:GO:0005524
GO:GO:0005634 GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 EMBL:AAFI02000082 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 Gene3D:1.20.1390.10 KO:K12813 GO:GO:0003724
RefSeq:XP_638017.1 EnsemblProtists:DDB0233398 GeneID:8625368
KEGG:ddi:DDB_G0285937 OMA:YLLEREV Uniprot:Q54MH3
Length = 1106
Score = 463 (168.0 bits), Expect = 4.1e-73, Sum P(3) = 4.1e-73
Identities = 130/460 (28%), Positives = 233/460 (50%)
Query: 541 REYSVQTQQSLSCWNPDSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQLQAH 600
R+Y V T + + D + ++ + HI E G +LVF+TG ++++ + LQ
Sbjct: 642 RKYEVTTHYTQAP-EADYLDAAVVTVLQIHIT--EPLGDILVFLTGQEEVDQAAEMLQTR 698
Query: 601 PL-LGDPSRVLLLA-CHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVID 658
LG + L++ + ++ + Q IF+ RK+VLATN+AETS+TI+ +++VID
Sbjct: 699 TRGLGTKIKELIITRIYSTLPTDLQAKIFEPTPPNARKVVLATNIAETSLTIDGIIYVID 758
Query: 659 CGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYD-AFADYQ 717
G K+ ++ L+ + +S+ V PG+C+ L+ + +D +
Sbjct: 759 PGFCKQKMFNPRTGMESLVITPVSRASANQRKGRAGRVAPGKCFRLFTAWAFDNELEENT 818
Query: 718 LPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLT 777
+PE+ RT L ++ L +KS+ + + F + PP ++ A+E L +GAL++ LT
Sbjct: 819 IPEIQRTNLGNVVLLLKSMGINDLMNF--DFMDPPPAQTLIAALEQLYALGALNDRGQLT 876
Query: 778 VLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDP-FLMPFDKKDLAESAKA 836
LGR ++ PV+P+L KM+I + C + ++T+ A LSV + F P DK A++A+
Sbjct: 877 KLGRKMAEFPVDPQLSKMIIASEKYKCSEEILTICAMLSVGNTIFYRPKDKAFAADAARK 936
Query: 837 QFSARDYSDHLALVRAYDGWKDAERHQSGY--EYCWKNFLSAQTLKAIDSLRKQFLFLLK 894
F DHL L+ ++ W++ SGY ++C++NF+ +++K +R Q LL+
Sbjct: 937 LFF-HPQGDHLTLMNVFNQWRE-----SGYAVQWCFENFIQHRSMKRAQDVRDQLELLLE 990
Query: 895 --DAGLVDRNTENCNKWSHDEHLIRAVICAGLFPGLCSVVNKEKSIALKTMEDGQ-VLLY 951
+ LV N + D IR I +G F + EKS +T + Q V ++
Sbjct: 991 RVEIPLVS-NVD-------DTDSIRKCIASGFFYNSAKL---EKSGLFRTTKHNQSVQIH 1039
Query: 952 SNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVSDSVL 991
+S + + P W+V++E + F+R + S L
Sbjct: 1040 PSSC---LFQSPPKWVVYHELVLTTKEFMRQIVEIQSSWL 1076
Score = 372 (136.0 bits), Expect = 4.1e-73, Sum P(3) = 4.1e-73
Identities = 96/265 (36%), Positives = 139/265 (52%)
Query: 231 NASMSSLS-NVG-STTNDEGLYEQQEQLVQNSV--VRERILRQRSLQMHEKQQAWQESPE 286
N S++S N G ST N G E+ E + ++ + ++E +L+Q Q + + +
Sbjct: 394 NRMKSAISENRGLSTANIGGGNEEYEYVFEDQIEFIKEEVLKQG--QKGDGVMILKPGDD 451
Query: 287 GQ---KML--EFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEA 341
G KM E R+SLP Y R+ L+ A+ E QV+++ GETG GKTTQ+PQY+ EA
Sbjct: 452 GSAQAKMTIQEVRKSLPVYPYREQLIDAVREYQVLIIVGETGSGKTTQIPQYL----HEA 507
Query: 342 ARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGI 401
I CTQPRR++AM+V+ RVA E G KLG VGY +R E + T L + T G+
Sbjct: 508 GFSKTGKIGCTQPRRVAAMSVAARVAEEVGCKLGNEVGYSIRFEDCTSQKTVLQYMTDGM 567
Query: 402 XXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELF 461
+ +I+DE HER ++ D L + SAT++AE F
Sbjct: 568 LVREFLTAPDLASYSVLIIDEAHERTLHTDILFGLLKDITRFRPDLKLLISSATMDAERF 627
Query: 462 SSYFGGAPMLHIPGFTYPVRAYFLE 486
S YF GAP +IPG Y V ++ +
Sbjct: 628 SDYFDGAPTFNIPGRKYEVTTHYTQ 652
Score = 49 (22.3 bits), Expect = 2.4e-39, Sum P(3) = 2.4e-39
Identities = 17/67 (25%), Positives = 39/67 (58%)
Query: 251 EQQEQLVQNSVVRERILRQRSLQMHEKQQAWQESPEGQKMLEFRRSLPS-YKERDALLKA 309
E++ +L ++ + E+ ++ + + A Q E Q+ ++ + LPS K++D+LLK+
Sbjct: 306 EEEYELFKDQKLTEQEIKDFEKKKKLYELASQRINESQQSDDYYQ-LPSEIKDKDSLLKS 364
Query: 310 --ISENQ 314
I++N+
Sbjct: 365 SYINDNK 371
Score = 44 (20.5 bits), Expect = 7.8e-39, Sum P(3) = 7.8e-39
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 486 ENILEMTRYRLNTYNQIDDYGQEKSWKMQKQAL 518
+ + E+ R+N Q DDY Q S K +L
Sbjct: 329 KKLYELASQRINESQQSDDYYQLPSEIKDKDSL 361
Score = 39 (18.8 bits), Expect = 5.0e-39, Sum P(2) = 5.0e-39
Identities = 11/47 (23%), Positives = 20/47 (42%)
Query: 148 DEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNY 194
D + ++S A D F A + R+Y +++AP +Y
Sbjct: 612 DLKLLISSATMDAERFSDYFDGAPTFNIPGRKYEVTTHYTQAPEADY 658
Score = 38 (18.4 bits), Expect = 4.1e-73, Sum P(3) = 4.1e-73
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 145 RNKDEQEVVSRAKKDRRD 162
R K E++ + KKD++D
Sbjct: 139 RKKKEKKKEKKDKKDKKD 156
>UNIPROTKB|A5D7D9 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
GeneTree:ENSGT00650000093246 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689
EMBL:DAAA02017121 EMBL:BC140520 IPI:IPI00709068
RefSeq:NP_001091487.1 UniGene:Bt.58909 Ensembl:ENSBTAT00000011714
GeneID:512327 KEGG:bta:512327 InParanoid:A5D7D9 NextBio:20870343
Uniprot:A5D7D9
Length = 795
Score = 503 (182.1 bits), Expect = 6.0e-73, Sum P(2) = 6.0e-73
Identities = 132/437 (30%), Positives = 239/437 (54%)
Query: 570 HIVKKERPGAVLVFMTGWDDINSLKDQLQAH-----PLLGDPSRVLLLACHGSMASSEQR 624
H+ ++E G +L+F+TG ++I+ +++ P +GD + ++ + ++ +Q+
Sbjct: 343 HMCEEEE-GDLLLFLTGQEEIDEACKRIKREVDDLGPEVGD---IKIIPLYSTLPPQQQQ 398
Query: 625 LIFDKP----EDGV--RKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLP 678
IF+ P ++G RK+V++TN+AETS+TI+ VVFVID G AK+ Y+ LL
Sbjct: 399 RIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLV 458
Query: 679 SWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDA-FADYQLPELLRTPLQSLCLQIKSLQ 737
+ ISK +PG+C+ LY Y D PE+LR+ L S+ LQ+K L
Sbjct: 459 TAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLG 518
Query: 738 LGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLI 797
+ + F + PP P ++ A+E L + AL+++ +LT LG ++ P++P+L KM+I
Sbjct: 519 IDDLVHF--DFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVI 576
Query: 798 LGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWK 857
+NC + V+++ A LSV F+ P + K A+ AK +F+ D DHL L+ Y +K
Sbjct: 577 ASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHID-GDHLTLLNVYHAFK 635
Query: 858 DAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDEHL-I 916
+ H+S ++C+ NF++ ++L + D++R+Q ++ L R+T+ S D ++ I
Sbjct: 636 --QNHES-VQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFT---SRDYYINI 689
Query: 917 RAVICAGLFPGLCSVVNKEKSIALKTMEDGQVL-LYSNSVNAGVPKIPYPWLVFNEKIKV 975
R + G F V + E++ T++D QV+ L+ ++V P+ W+++NE +
Sbjct: 690 RKALVTGYF---MQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPE----WVLYNEFVLT 742
Query: 976 NSVFLRDSTGVSDSVLL 992
++R T + L+
Sbjct: 743 TKNYIRTCTDIKPEWLV 759
Score = 308 (113.5 bits), Expect = 6.0e-73, Sum P(2) = 6.0e-73
Identities = 71/201 (35%), Positives = 103/201 (51%)
Query: 284 SPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAAR 343
+P +L+ R LP ++ +D + +Q V+ GETG GKTTQ+PQ+ +E +
Sbjct: 124 TPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEY-MRSLP 182
Query: 344 GAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXX 403
G + CTQPRR++AM+V++RVA E LG+ VGY +R E T L + T G+
Sbjct: 183 GPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLL 242
Query: 404 XXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSS 463
+I+DE HER + D L+ V MSATL+A F
Sbjct: 243 REAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQI 302
Query: 464 YFGGAPMLHIPGFTYPVRAYF 484
YF P+L IPG T+PV ++
Sbjct: 303 YFDNCPLLTIPGRTHPVEIFY 323
>UNIPROTKB|E2R2U3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
CTD:1665 GO:GO:0005689 EMBL:AAEX03002593 EMBL:AAEX03002594
RefSeq:XP_851535.1 Ensembl:ENSCAFT00000026155 GeneID:488856
KEGG:cfa:488856 NextBio:20862139 Uniprot:E2R2U3
Length = 795
Score = 503 (182.1 bits), Expect = 6.0e-73, Sum P(2) = 6.0e-73
Identities = 132/437 (30%), Positives = 239/437 (54%)
Query: 570 HIVKKERPGAVLVFMTGWDDINSLKDQLQAH-----PLLGDPSRVLLLACHGSMASSEQR 624
H+ ++E G +L+F+TG ++I+ +++ P +GD + ++ + ++ +Q+
Sbjct: 343 HMCEEEE-GDLLLFLTGQEEIDEACKRIKREVDDLGPEVGD---IKIIPLYSTLPPQQQQ 398
Query: 625 LIFDKP----EDGV--RKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLP 678
IF+ P ++G RK+V++TN+AETS+TI+ VVFVID G AK+ Y+ LL
Sbjct: 399 RIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLV 458
Query: 679 SWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDA-FADYQLPELLRTPLQSLCLQIKSLQ 737
+ ISK +PG+C+ LY Y D PE+LR+ L S+ LQ+K L
Sbjct: 459 TAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLG 518
Query: 738 LGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLI 797
+ + F + PP P ++ A+E L + AL+++ +LT LG ++ P++P+L KM+I
Sbjct: 519 IDDLVHF--DFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVI 576
Query: 798 LGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWK 857
+NC + V+++ A LSV F+ P + K A+ AK +F+ D DHL L+ Y +K
Sbjct: 577 ASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHID-GDHLTLLNVYHAFK 635
Query: 858 DAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDEHL-I 916
+ H+S ++C+ NF++ ++L + D++R+Q ++ L R+T+ S D ++ I
Sbjct: 636 --QNHES-VQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFT---SRDYYINI 689
Query: 917 RAVICAGLFPGLCSVVNKEKSIALKTMEDGQVL-LYSNSVNAGVPKIPYPWLVFNEKIKV 975
R + G F V + E++ T++D QV+ L+ ++V P+ W+++NE +
Sbjct: 690 RKALVTGYF---MQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPE----WVLYNEFVLT 742
Query: 976 NSVFLRDSTGVSDSVLL 992
++R T + L+
Sbjct: 743 TKNYIRTCTDIKPEWLV 759
Score = 308 (113.5 bits), Expect = 6.0e-73, Sum P(2) = 6.0e-73
Identities = 71/201 (35%), Positives = 103/201 (51%)
Query: 284 SPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAAR 343
+P +L+ R LP ++ +D + +Q V+ GETG GKTTQ+PQ+ +E +
Sbjct: 124 TPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEY-MRSLP 182
Query: 344 GAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXX 403
G + CTQPRR++AM+V++RVA E LG+ VGY +R E T L + T G+
Sbjct: 183 GPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLL 242
Query: 404 XXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSS 463
+I+DE HER + D L+ V MSATL+A F
Sbjct: 243 REAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQI 302
Query: 464 YFGGAPMLHIPGFTYPVRAYF 484
YF P+L IPG T+PV ++
Sbjct: 303 YFDNCPLLTIPGRTHPVEIFY 323
>UNIPROTKB|O43143 [details] [associations]
symbol:DHX15 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX15" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0008380 "RNA splicing" evidence=IC]
[GO:0005689 "U12-type spliceosomal complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 EMBL:AB001636 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0003724
KO:K12820 OMA:TVLQIHA EMBL:AF279891 EMBL:BC035974 IPI:IPI00396435
PIR:JC5785 RefSeq:NP_001349.2 UniGene:Hs.696074
ProteinModelPortal:O43143 SMR:O43143 DIP:DIP-38211N IntAct:O43143
MINT:MINT-5003827 STRING:O43143 PhosphoSite:O43143
SWISS-2DPAGE:O43143 PaxDb:O43143 PRIDE:O43143
Ensembl:ENST00000336812 GeneID:1665 KEGG:hsa:1665 UCSC:uc003gqx.3
CTD:1665 GeneCards:GC04M024519 HGNC:HGNC:2738 HPA:HPA047047
MIM:603403 neXtProt:NX_O43143 PharmGKB:PA27204 HOVERGEN:HBG039428
InParanoid:O43143 OrthoDB:EOG4K6G3N GenomeRNAi:1665 NextBio:6852
ArrayExpress:O43143 Bgee:O43143 CleanEx:HS_DHX15
Genevestigator:O43143 GermOnline:ENSG00000109606 GO:GO:0005689
Uniprot:O43143
Length = 795
Score = 503 (182.1 bits), Expect = 6.0e-73, Sum P(2) = 6.0e-73
Identities = 132/437 (30%), Positives = 239/437 (54%)
Query: 570 HIVKKERPGAVLVFMTGWDDINSLKDQLQAH-----PLLGDPSRVLLLACHGSMASSEQR 624
H+ ++E G +L+F+TG ++I+ +++ P +GD + ++ + ++ +Q+
Sbjct: 343 HMCEEEE-GDLLLFLTGQEEIDEACKRIKREVDDLGPEVGD---IKIIPLYSTLPPQQQQ 398
Query: 625 LIFDKP----EDGV--RKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLP 678
IF+ P ++G RK+V++TN+AETS+TI+ VVFVID G AK+ Y+ LL
Sbjct: 399 RIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLV 458
Query: 679 SWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDA-FADYQLPELLRTPLQSLCLQIKSLQ 737
+ ISK +PG+C+ LY Y D PE+LR+ L S+ LQ+K L
Sbjct: 459 TAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLG 518
Query: 738 LGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLI 797
+ + F + PP P ++ A+E L + AL+++ +LT LG ++ P++P+L KM+I
Sbjct: 519 IDDLVHF--DFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVI 576
Query: 798 LGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWK 857
+NC + V+++ A LSV F+ P + K A+ AK +F+ D DHL L+ Y +K
Sbjct: 577 ASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHID-GDHLTLLNVYHAFK 635
Query: 858 DAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDEHL-I 916
+ H+S ++C+ NF++ ++L + D++R+Q ++ L R+T+ S D ++ I
Sbjct: 636 --QNHES-VQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFT---SRDYYINI 689
Query: 917 RAVICAGLFPGLCSVVNKEKSIALKTMEDGQVL-LYSNSVNAGVPKIPYPWLVFNEKIKV 975
R + G F V + E++ T++D QV+ L+ ++V P+ W+++NE +
Sbjct: 690 RKALVTGYF---MQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPE----WVLYNEFVLT 742
Query: 976 NSVFLRDSTGVSDSVLL 992
++R T + L+
Sbjct: 743 TKNYIRTCTDIKPEWLV 759
Score = 308 (113.5 bits), Expect = 6.0e-73, Sum P(2) = 6.0e-73
Identities = 71/201 (35%), Positives = 103/201 (51%)
Query: 284 SPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAAR 343
+P +L+ R LP ++ +D + +Q V+ GETG GKTTQ+PQ+ +E +
Sbjct: 124 TPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEY-MRSLP 182
Query: 344 GAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXX 403
G + CTQPRR++AM+V++RVA E LG+ VGY +R E T L + T G+
Sbjct: 183 GPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLL 242
Query: 404 XXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSS 463
+I+DE HER + D L+ V MSATL+A F
Sbjct: 243 REAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQI 302
Query: 464 YFGGAPMLHIPGFTYPVRAYF 484
YF P+L IPG T+PV ++
Sbjct: 303 YFDNCPLLTIPGRTHPVEIFY 323
>UNIPROTKB|F1S5A8 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00650000093246 OMA:TVLQIHA GO:GO:0005689
EMBL:CU633303 Ensembl:ENSSSCT00000009580 Uniprot:F1S5A8
Length = 795
Score = 503 (182.1 bits), Expect = 6.0e-73, Sum P(2) = 6.0e-73
Identities = 132/437 (30%), Positives = 239/437 (54%)
Query: 570 HIVKKERPGAVLVFMTGWDDINSLKDQLQAH-----PLLGDPSRVLLLACHGSMASSEQR 624
H+ ++E G +L+F+TG ++I+ +++ P +GD + ++ + ++ +Q+
Sbjct: 343 HMCEEEE-GDLLLFLTGQEEIDEACKRIKREVDDLGPEVGD---IKIIPLYSTLPPQQQQ 398
Query: 625 LIFDKP----EDGV--RKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLP 678
IF+ P ++G RK+V++TN+AETS+TI+ VVFVID G AK+ Y+ LL
Sbjct: 399 RIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLV 458
Query: 679 SWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDA-FADYQLPELLRTPLQSLCLQIKSLQ 737
+ ISK +PG+C+ LY Y D PE+LR+ L S+ LQ+K L
Sbjct: 459 TAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLG 518
Query: 738 LGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLI 797
+ + F + PP P ++ A+E L + AL+++ +LT LG ++ P++P+L KM+I
Sbjct: 519 IDDLVHF--DFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVI 576
Query: 798 LGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWK 857
+NC + V+++ A LSV F+ P + K A+ AK +F+ D DHL L+ Y +K
Sbjct: 577 ASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHID-GDHLTLLNVYHAFK 635
Query: 858 DAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDEHL-I 916
+ H+S ++C+ NF++ ++L + D++R+Q ++ L R+T+ S D ++ I
Sbjct: 636 --QNHES-VQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFT---SRDYYINI 689
Query: 917 RAVICAGLFPGLCSVVNKEKSIALKTMEDGQVL-LYSNSVNAGVPKIPYPWLVFNEKIKV 975
R + G F V + E++ T++D QV+ L+ ++V P+ W+++NE +
Sbjct: 690 RKALVTGYF---MQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPE----WVLYNEFVLT 742
Query: 976 NSVFLRDSTGVSDSVLL 992
++R T + L+
Sbjct: 743 TKNYIRTCTDIKPEWLV 759
Score = 308 (113.5 bits), Expect = 6.0e-73, Sum P(2) = 6.0e-73
Identities = 71/201 (35%), Positives = 103/201 (51%)
Query: 284 SPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAAR 343
+P +L+ R LP ++ +D + +Q V+ GETG GKTTQ+PQ+ +E +
Sbjct: 124 TPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEY-MRSLP 182
Query: 344 GAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXX 403
G + CTQPRR++AM+V++RVA E LG+ VGY +R E T L + T G+
Sbjct: 183 GPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLL 242
Query: 404 XXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSS 463
+I+DE HER + D L+ V MSATL+A F
Sbjct: 243 REAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQI 302
Query: 464 YFGGAPMLHIPGFTYPVRAYF 484
YF P+L IPG T+PV ++
Sbjct: 303 YFDNCPLLTIPGRTHPVEIFY 323
>MGI|MGI:1099786 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005689 "U12-type spliceosomal complex" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
MGI:MGI:1099786 GO:GO:0005524 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:AF017153
EMBL:BC003745 IPI:IPI00128818 RefSeq:NP_031865.2 UniGene:Mm.993
ProteinModelPortal:O35286 SMR:O35286 STRING:O35286
PhosphoSite:O35286 PaxDb:O35286 PRIDE:O35286
Ensembl:ENSMUST00000031061 GeneID:13204 KEGG:mmu:13204
InParanoid:O35286 NextBio:283358 Bgee:O35286 CleanEx:MM_DHX15
Genevestigator:O35286 GermOnline:ENSMUSG00000029169 Uniprot:O35286
Length = 795
Score = 503 (182.1 bits), Expect = 6.0e-73, Sum P(2) = 6.0e-73
Identities = 132/437 (30%), Positives = 239/437 (54%)
Query: 570 HIVKKERPGAVLVFMTGWDDINSLKDQLQAH-----PLLGDPSRVLLLACHGSMASSEQR 624
H+ ++E G +L+F+TG ++I+ +++ P +GD + ++ + ++ +Q+
Sbjct: 343 HMCEEEE-GDLLLFLTGQEEIDEACKRIKREVDDLGPEVGD---IKIIPLYSTLPPQQQQ 398
Query: 625 LIFDKP----EDGV--RKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLP 678
IF+ P ++G RK+V++TN+AETS+TI+ VVFVID G AK+ Y+ LL
Sbjct: 399 RIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLV 458
Query: 679 SWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDA-FADYQLPELLRTPLQSLCLQIKSLQ 737
+ ISK +PG+C+ LY Y D PE+LR+ L S+ LQ+K L
Sbjct: 459 TAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLG 518
Query: 738 LGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLI 797
+ + F + PP P ++ A+E L + AL+++ +LT LG ++ P++P+L KM+I
Sbjct: 519 IDDLVHF--DFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVI 576
Query: 798 LGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWK 857
+NC + V+++ A LSV F+ P + K A+ AK +F+ D DHL L+ Y +K
Sbjct: 577 ASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHID-GDHLTLLNVYHAFK 635
Query: 858 DAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDEHL-I 916
+ H+S ++C+ NF++ ++L + D++R+Q ++ L R+T+ S D ++ I
Sbjct: 636 --QNHES-VQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFT---SRDYYINI 689
Query: 917 RAVICAGLFPGLCSVVNKEKSIALKTMEDGQVL-LYSNSVNAGVPKIPYPWLVFNEKIKV 975
R + G F V + E++ T++D QV+ L+ ++V P+ W+++NE +
Sbjct: 690 RKALVTGYF---MQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPE----WVLYNEFVLT 742
Query: 976 NSVFLRDSTGVSDSVLL 992
++R T + L+
Sbjct: 743 TKNYIRTCTDIKPEWLV 759
Score = 308 (113.5 bits), Expect = 6.0e-73, Sum P(2) = 6.0e-73
Identities = 71/201 (35%), Positives = 103/201 (51%)
Query: 284 SPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAAR 343
+P +L+ R LP ++ +D + +Q V+ GETG GKTTQ+PQ+ +E +
Sbjct: 124 TPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEY-MRSLP 182
Query: 344 GAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXX 403
G + CTQPRR++AM+V++RVA E LG+ VGY +R E T L + T G+
Sbjct: 183 GPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLL 242
Query: 404 XXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSS 463
+I+DE HER + D L+ V MSATL+A F
Sbjct: 243 REAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQI 302
Query: 464 YFGGAPMLHIPGFTYPVRAYF 484
YF P+L IPG T+PV ++
Sbjct: 303 YFDNCPLLTIPGRTHPVEIFY 323
>RGD|1308072 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005689 "U12-type
spliceosomal complex" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 RGD:1308072 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:CH473963
IPI:IPI00361832 RefSeq:NP_001178526.1 UniGene:Rn.55597
Ensembl:ENSRNOT00000005126 GeneID:289693 KEGG:rno:289693
NextBio:630162 Uniprot:D3ZD97
Length = 795
Score = 503 (182.1 bits), Expect = 6.0e-73, Sum P(2) = 6.0e-73
Identities = 132/437 (30%), Positives = 239/437 (54%)
Query: 570 HIVKKERPGAVLVFMTGWDDINSLKDQLQAH-----PLLGDPSRVLLLACHGSMASSEQR 624
H+ ++E G +L+F+TG ++I+ +++ P +GD + ++ + ++ +Q+
Sbjct: 343 HMCEEEE-GDLLLFLTGQEEIDEACKRIKREVDDLGPEVGD---IKIIPLYSTLPPQQQQ 398
Query: 625 LIFDKP----EDGV--RKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLP 678
IF+ P ++G RK+V++TN+AETS+TI+ VVFVID G AK+ Y+ LL
Sbjct: 399 RIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLV 458
Query: 679 SWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDA-FADYQLPELLRTPLQSLCLQIKSLQ 737
+ ISK +PG+C+ LY Y D PE+LR+ L S+ LQ+K L
Sbjct: 459 TAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLG 518
Query: 738 LGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLI 797
+ + F + PP P ++ A+E L + AL+++ +LT LG ++ P++P+L KM+I
Sbjct: 519 IDDLVHF--DFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVI 576
Query: 798 LGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWK 857
+NC + V+++ A LSV F+ P + K A+ AK +F+ D DHL L+ Y +K
Sbjct: 577 ASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHID-GDHLTLLNVYHAFK 635
Query: 858 DAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDEHL-I 916
+ H+S ++C+ NF++ ++L + D++R+Q ++ L R+T+ S D ++ I
Sbjct: 636 --QNHES-VQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFT---SRDYYINI 689
Query: 917 RAVICAGLFPGLCSVVNKEKSIALKTMEDGQVL-LYSNSVNAGVPKIPYPWLVFNEKIKV 975
R + G F V + E++ T++D QV+ L+ ++V P+ W+++NE +
Sbjct: 690 RKALVTGYF---MQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPE----WVLYNEFVLT 742
Query: 976 NSVFLRDSTGVSDSVLL 992
++R T + L+
Sbjct: 743 TKNYIRTCTDIKPEWLV 759
Score = 308 (113.5 bits), Expect = 6.0e-73, Sum P(2) = 6.0e-73
Identities = 71/201 (35%), Positives = 103/201 (51%)
Query: 284 SPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAAR 343
+P +L+ R LP ++ +D + +Q V+ GETG GKTTQ+PQ+ +E +
Sbjct: 124 TPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEY-MRSLP 182
Query: 344 GAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXX 403
G + CTQPRR++AM+V++RVA E LG+ VGY +R E T L + T G+
Sbjct: 183 GPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLL 242
Query: 404 XXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSS 463
+I+DE HER + D L+ V MSATL+A F
Sbjct: 243 REAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQI 302
Query: 464 YFGGAPMLHIPGFTYPVRAYF 484
YF P+L IPG T+PV ++
Sbjct: 303 YFDNCPLLTIPGRTHPVEIFY 323
>TAIR|locus:2088847 [details] [associations]
symbol:AT3G26560 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA;ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005739 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 EMBL:X98130
EMBL:X97970 EMBL:AB028611 IPI:IPI00530246 RefSeq:NP_189288.1
UniGene:At.46918 ProteinModelPortal:Q38953 SMR:Q38953 STRING:Q38953
PaxDb:Q38953 PRIDE:Q38953 EnsemblPlants:AT3G26560.1 GeneID:822264
KEGG:ath:AT3G26560 GeneFarm:1800 TAIR:At3g26560 InParanoid:Q38953
KO:K12818 OMA:NAWCYEN PhylomeDB:Q38953 ProtClustDB:CLSN2684863
Genevestigator:Q38953 GermOnline:AT3G26560 Uniprot:Q38953
Length = 1168
Score = 482 (174.7 bits), Expect = 6.4e-73, Sum P(2) = 6.4e-73
Identities = 128/439 (29%), Positives = 224/439 (51%)
Query: 557 DSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQLQAHPL-LG-DPSRVLLLAC 614
D + LI + H+ + E G +LVF+TG ++I+S L LG + +++L
Sbjct: 705 DYLDAALITVLQIHLTEPE--GDILVFLTGQEEIDSACQSLYERMKGLGKNVPELIILPV 762
Query: 615 HGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTP 674
+ ++ S Q IFD P G RK+V+ATN+AE S+TI+ + +V+D G AK+ Y+
Sbjct: 763 YSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDPGFAKQNVYNPKQGLE 822
Query: 675 CLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVY-DAFADYQLPELLRTPLQSLCLQI 733
L+ + IS+ PG+CY LY Y + +PE+ R L L +
Sbjct: 823 SLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTSIPEIQRINLGMTTLTM 882
Query: 734 KSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLG 793
K++ + + F + PP+P ++ +A+E L +GALDE LT LGR ++ P+EP L
Sbjct: 883 KAMGINDLLSF--DFMDPPQPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLEPPLS 940
Query: 794 KMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAY 853
KML+ C D ++T++A + + F P +K+ A+ +A+F + DHL L+ Y
Sbjct: 941 KMLLASVDLGCSDEILTMIAMIQTGNIFYRPREKQAQADQKRAKFFQPE-GDHLTLLAVY 999
Query: 854 DGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDE 913
+ WK ++ SG +C++NF+ +++L+ +RKQ L ++ D +D T N
Sbjct: 1000 EAWK--AKNFSG-PWCFENFIQSRSLRRAQDVRKQLLSIM-DKYKLDVVTAGKNFTK--- 1052
Query: 914 HLIRAVICAGLFPGLCSVVNKEKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFNEKI 973
IR I AG F K+ +T+ + Q + Y + +A + P W+++++ +
Sbjct: 1053 --IRKAITAGFF---FHGARKDPQEGYRTLVENQPV-YIHPSSALFQRQP-DWVIYHDLV 1105
Query: 974 KVNSVFLRDSTGVSDSVLL 992
++R+ T + L+
Sbjct: 1106 MTTKEYMREVTVIDPKWLV 1124
Score = 342 (125.4 bits), Expect = 6.4e-73, Sum P(2) = 6.4e-73
Identities = 83/213 (38%), Positives = 120/213 (56%)
Query: 277 KQQAWQESPE-GQK----MLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLP 331
K+ A+ ++P GQ+ + E R SLP YK + L++A+ +NQV+VV GETG GKTTQ+
Sbjct: 490 KKDAFGKTPTFGQRSKLSIQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVT 549
Query: 332 QYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRD 391
QY+ E+ +G I CTQPRR++AM+V++RVA E G +LGE VGY +R E G D
Sbjct: 550 QYLAEAGY-TTKG---KIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPD 605
Query: 392 TRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXX 451
T + + T G+ + +++DE HER ++ D L +
Sbjct: 606 TVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIV 665
Query: 452 MSATLNAELFSSYFGGAPMLHIPGFTYPVRAYF 484
SATL+AE FS YF + IPG T+PV +
Sbjct: 666 TSATLDAEKFSGYFFNCNIFTIPGRTFPVEILY 698
Score = 50 (22.7 bits), Expect = 3.4e-42, Sum P(2) = 3.4e-42
Identities = 11/46 (23%), Positives = 23/46 (50%)
Query: 490 EMTRYRLNTYNQIDDYGQEKSWKMQKQ--ALALRKRKSSIASAVED 533
+M ++ + + + +GQ +Q+Q +L + K K + AV D
Sbjct: 485 DMPEWKKDAFGKTPTFGQRSKLSIQEQRESLPIYKLKKELIQAVHD 530
>POMBASE|SPCC895.09c [details] [associations]
symbol:ucp12 "ATP-dependent RNA helicase Ucp12
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008150 "biological_process" evidence=ND] [GO:0043130
"ubiquitin binding" evidence=ISM] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908
PROSITE:PS51194 SMART:SM00490 SMART:SM00591 SMART:SM00847
PomBase:SPCC895.09c GO:GO:0005829 GO:GO:0005524 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0003676 PROSITE:PS50030
InterPro:IPR016135 SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043130 SUPFAM:SSF46934 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 PIR:T41647
RefSeq:NP_588050.1 ProteinModelPortal:O94536
EnsemblFungi:SPCC895.09c.1 GeneID:2539263 KEGG:spo:SPCC895.09c
HOGENOM:HOG000167651 OMA:GWARIGV OrthoDB:EOG4Z65WS NextBio:20800433
Uniprot:O94536
Length = 1327
Score = 418 (152.2 bits), Expect = 6.4e-73, Sum P(3) = 6.4e-73
Identities = 126/400 (31%), Positives = 199/400 (49%)
Query: 559 IGFNLIEHVLCHIVKK--ERPGAVLVFMTGWDDINSLKDQLQAHPLLGDPSRVLLLACHG 616
I ++LI ++ I + G++LVF+ G +I ++++ D S+ +L H
Sbjct: 793 IDYHLISRLVSSIDAELGSSSGSILVFLPGVSNIARCIREIKSK----DGSKFEVLPLHA 848
Query: 617 SMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCL 676
S+ +SEQR F RKI+ ATN+AETSITI+DVV VID G+ K+ YD +
Sbjct: 849 SLNTSEQRRCFKTYTK--RKIICATNIAETSITIDDVVAVIDSGRVKQIDYDVERDLVTF 906
Query: 677 LPSWISKXXXXXXXXXXXXVQPGECYHLYPR-YVYDAFADYQLPELLRTPLQSLCLQI-- 733
+W S+ V+ G CY LY R + PE+LRT L +CL +
Sbjct: 907 KETWASRAACQQRRGRAGRVKKGICYKLYTRGFEEKGMLGQTPPEVLRTALSQVCLNVVP 966
Query: 734 ---------KSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLS 784
S+ GSI +F++ + PP +V A++ L +GAL +E+LT LG L
Sbjct: 967 LVKRFSSAGNSVNQGSIKKFMNSLIDPPNDATVDLALKKLIQVGALTVSEDLTGLGEYLV 1026
Query: 785 MLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYS 844
LP++ KLGK+L+ G+IF L+P +T+ A LS + PFL + +++ S ++Q +
Sbjct: 1027 SLPIDLKLGKLLVFGSIFGYLEPALTITAILSTKSPFLGDDEAREI-RSKQSQ----GWG 1081
Query: 845 DHLALVRAYDGWKDA-ERH--QSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDR 901
D LA R Y W + E + ++C + L TL+ I R + L + A L++
Sbjct: 1082 DVLADARVYHNWLEILETRGVKKTVQWCEEMHLHYTTLQQIRQNRNE---LSEAAQLLEL 1138
Query: 902 NTENCN---KWSHDEHL--IRAVICAGLFPGLCSVVNKEK 936
T+ W E+L + +I A L P + V +K
Sbjct: 1139 TTKKLTGNFDWYSTENLTVLSTLIAAALSPNVVKCVYPDK 1178
Score = 410 (149.4 bits), Expect = 6.4e-73, Sum P(3) = 6.4e-73
Identities = 102/304 (33%), Positives = 162/304 (53%)
Query: 233 SMSSLSNVGSTTNDEGLYEQQEQLV---QNSVVRERILRQRSLQMHEKQ-QAWQE---SP 285
++ SL N+ + T L Q + +N+ + ++ R RS ++ EK W E SP
Sbjct: 507 NIGSLLNISAATIGVSLSSQNKSAPTAKKNNSFKPKLFR-RSRELSEKLCNNWSERVKSP 565
Query: 286 EGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGA 345
Q + R LP+++ R ++ AI +QVVV+SGETG GK+TQ+ Q+IL+ +
Sbjct: 566 SYQLKVREREKLPAWESRRKIMDAIQHSQVVVISGETGSGKSTQVVQFILDHYLSSGEKD 625
Query: 346 ACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXX 405
+++CTQPRRISA++++ERVA ER +G+ VGY V E ++T L FCTTG+
Sbjct: 626 LQTVVCTQPRRISAISLAERVAFERDTTVGKEVGYSVHGEKSISKETLLEFCTTGLLLRR 685
Query: 406 XXXXXXX--XGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSS 463
++ V+VDE+HER + D LL + MSAT+N++ F
Sbjct: 686 IQQHGLGFLSTLSCVVVDEVHERSIENDILLTLLKLVISRIPNLKVILMSATVNSDTFKY 745
Query: 464 YFGGAPMLHIPGFTYPVRAYFLENILEMTRYRLNTYNQIDDYGQEKSWKMQKQALALRKR 523
YFG A LHI G T+P++ Y++E+ +LN + +D + K + + + +
Sbjct: 746 YFGNAGHLHIHGRTFPIKDYYIEDFAP----KLNEDDDEEDVPRRKKKEYEIDYHLISRL 801
Query: 524 KSSI 527
SSI
Sbjct: 802 VSSI 805
Score = 51 (23.0 bits), Expect = 6.4e-73, Sum P(3) = 6.4e-73
Identities = 12/48 (25%), Positives = 25/48 (52%)
Query: 950 LYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVSDSVLLLFGGN 997
++ NS NA ++ + +K++ FLR+ T ++ ++L G N
Sbjct: 1215 MFVNSPNAS----RCTFVAYEQKVETTKPFLRNCTPINTYGMILLGAN 1258
>FB|FBgn0086444 [details] [associations]
symbol:l(2)37Cb "lethal (2) 37Cb" species:7227 "Drosophila
melanogaster" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12813 GO:GO:0016779 GeneTree:ENSGT00700000104241
OMA:GTLHREF EMBL:AY061330 RefSeq:NP_609946.1 UniGene:Dm.468
SMR:Q9VIZ3 IntAct:Q9VIZ3 MINT:MINT-318410 STRING:Q9VIZ3
EnsemblMetazoa:FBtr0081163 GeneID:35192 KEGG:dme:Dmel_CG10689
UCSC:CG10689-RA FlyBase:FBgn0086444 InParanoid:Q9VIZ3
OrthoDB:EOG459ZWG GenomeRNAi:35192 NextBio:792305 Uniprot:Q9VIZ3
Length = 894
Score = 462 (167.7 bits), Expect = 7.0e-73, Sum P(2) = 7.0e-73
Identities = 124/420 (29%), Positives = 222/420 (52%)
Query: 578 GAVLVFMTGWDDINSLKDQLQAH-PLLGDPSRVLL-LACHGSMASSEQRLIFDKPEDGVR 635
G +LVF+TG D+I + ++ L LG R L+ + + ++ S Q IF+ R
Sbjct: 462 GDILVFLTGQDEIETCQEVLHDRVKRLGSKIRELIVIPVYANLPSDMQAKIFEPTPPNAR 521
Query: 636 KIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXXX 695
K++LATN+AETS+TI+++++VID G AK+ ++++ L+ ISK
Sbjct: 522 KVILATNIAETSLTIDNIIYVIDPGFAKQNNFNSRTGMESLMVVPISKASANQRAGRAGR 581
Query: 696 VQPGECYHLYPRYVYD-AFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPEP 754
PG+C+ LY + Y D +PE+ R L + L +K+L + + F L PP
Sbjct: 582 TAPGKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHF--DFLDPPPH 639
Query: 755 LSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAG 814
++ A+E L +GAL+ + LT LGR ++ PV+P +GKML+ + C + ++T+ A
Sbjct: 640 ETLVLALEQLYALGALNHHGELTKLGRRMAEFPVDPMMGKMLLASEKYKCSEEMVTIAAM 699
Query: 815 LSVRDP-FLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYEYCWKNF 873
LSV F P DK A++A+ F+ + DHL+L++ Y+ W AE S ++C++NF
Sbjct: 700 LSVNSAIFYRPKDKIIHADTARKNFNHM-HGDHLSLLQVYNQW--AETDYST-QWCYENF 755
Query: 874 LSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDEHLIRAVICAGLFPGLCSVVN 933
+ +++K +R+Q + L++ V+ + +C + + +R AG F V
Sbjct: 756 IQYRSMKRARDVREQLVGLMQR---VEIDMVSCLPETVN---VRKAATAGYF---YHVAR 806
Query: 934 KEKSIALKTMEDGQ-VLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVSDSVLL 992
K KT++ Q V+++ NS + ++P W++++E + + ++R + LL
Sbjct: 807 LSKGGHYKTIKHNQTVMIHPNS--SLFEELPR-WVLYHELVFTSKEYMRQVIEIESKWLL 863
Score = 357 (130.7 bits), Expect = 7.0e-73, Sum P(2) = 7.0e-73
Identities = 105/341 (30%), Positives = 162/341 (47%)
Query: 148 DEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNYRSDLDEKRPQREV 207
DE + R K++R +QL +A +++ K + + Y D K+ +R
Sbjct: 114 DESVLTKREKEEREYKKQLLNIA-------KEHEKARELER--IQRYNMPQDLKKGERSE 164
Query: 208 ILPFGLLREVDAHLKAYLS-QKYINASMSSLSNVGSTTNDEGLYEQQEQLVQNSV-VRER 265
+ EVD K S QK A + + D E+ E L+ + + +
Sbjct: 165 YV------EVDEFEKQPNSEQKKWEAEQLASARFHFGAKDAKAEEEYELLLDDQIDFIQA 218
Query: 266 ILRQRSLQMHEKQQAWQESPEGQKML--EFRRSLPSYKERDALLKAISENQVVVVSGETG 323
+ S + +Q E +++ E RRSLP Y ++ L+ A+ E+QV+++ GETG
Sbjct: 219 LTLDGSREKSSSRQPELTEKERKRLTLDETRRSLPVYPFKEDLIAAVKEHQVLIIEGETG 278
Query: 324 CGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVR 383
GKTTQ+PQY++E+ + I CTQPRR++AM+V+ RVA E G KLG VGY +R
Sbjct: 279 SGKTTQVPQYLVEAGFTKDKKM---IGCTQPRRVAAMSVAARVAEEMGVKLGNEVGYSIR 335
Query: 384 LEGMKGRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXX 443
E T L + T G + +I+DE HER ++ D L +
Sbjct: 336 FEDCTSDRTILKYMTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIARF 395
Query: 444 XXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYF 484
SATL+AE FS++F AP+ IPG YPV ++
Sbjct: 396 RPELKLLISSATLDAEKFSAFFDDAPIFRIPGRRYPVDIFY 436
Score = 40 (19.1 bits), Expect = 1.6e-39, Sum P(2) = 1.6e-39
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 152 VVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNY 194
++S A D F A + R+Y + ++KAP +Y
Sbjct: 402 LISSATLDAEKFSAFFDDAPIFRIPGRRYPVDIFYTKAPEADY 444
>UNIPROTKB|F1NHI3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
GO:GO:0005689 EMBL:AADN02015408 EMBL:AADN02015409 EMBL:AADN02015410
IPI:IPI00577528 Ensembl:ENSGALT00000023259 Uniprot:F1NHI3
Length = 762
Score = 504 (182.5 bits), Expect = 1.2e-72, Sum P(2) = 1.2e-72
Identities = 133/437 (30%), Positives = 240/437 (54%)
Query: 570 HIVKKERPGAVLVFMTGWDDINS----LKDQLQ-AHPLLGDPSRVLLLACHGSMASSEQR 624
H+ ++E G +L+F+TG ++I+ +K ++ P +GD + ++ + ++ +Q+
Sbjct: 310 HMCEEEE-GDLLLFLTGQEEIDEACKRIKREIDDLGPEVGD---IKIIPLYSTLPPQQQQ 365
Query: 625 LIFDKP----EDGV--RKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLP 678
IF+ P ++G RK+V++TN+AETS+TI+ VVFVID G AK+ Y+ LL
Sbjct: 366 RIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLV 425
Query: 679 SWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDA-FADYQLPELLRTPLQSLCLQIKSLQ 737
+ ISK +PG+C+ LY Y D PE+LR+ L S+ LQ+K L
Sbjct: 426 TAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLG 485
Query: 738 LGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLI 797
+ + F + PP P ++ A+E L + AL+++ +LT LG ++ P++P+L KM+I
Sbjct: 486 IDDLVHF--DFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVI 543
Query: 798 LGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWK 857
+NC + V+++ A LSV F+ P + K A+ AK +F+ D DHL L+ Y +K
Sbjct: 544 ASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHID-GDHLTLLNVYHAFK 602
Query: 858 DAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDEHL-I 916
+ H+S ++C+ NF++ ++L + D++R+Q ++ L R+T+ S D ++ I
Sbjct: 603 --QNHES-VQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFT---SRDYYINI 656
Query: 917 RAVICAGLFPGLCSVVNKEKSIALKTMEDGQVL-LYSNSVNAGVPKIPYPWLVFNEKIKV 975
R + G F V + E++ T++D QV+ L+ ++V P+ W+++NE +
Sbjct: 657 RKALVTGYF---MQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPE----WVLYNEFVLT 709
Query: 976 NSVFLRDSTGVSDSVLL 992
++R T + L+
Sbjct: 710 TKNYIRTCTDIKPEWLV 726
Score = 301 (111.0 bits), Expect = 1.2e-72, Sum P(2) = 1.2e-72
Identities = 69/201 (34%), Positives = 103/201 (51%)
Query: 284 SPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAAR 343
+P +L+ R LP ++ ++ + +Q V+ GETG GKTTQ+PQ+ ++ +
Sbjct: 91 TPRYYDILKKRLQLPVWEYKERFTDILIRHQSFVLVGETGSGKTTQIPQWCVDY-MRSLP 149
Query: 344 GAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXX 403
G + CTQPRR++AM+V++RVA E LG+ VGY +R E T L + T G+
Sbjct: 150 GPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLL 209
Query: 404 XXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSS 463
+I+DE HER + D L+ V MSATL+A F
Sbjct: 210 REAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRADLKVIVMSATLDAGKFQI 269
Query: 464 YFGGAPMLHIPGFTYPVRAYF 484
YF P+L IPG T+PV ++
Sbjct: 270 YFDNCPLLTIPGRTHPVEIFY 290
>UNIPROTKB|J3KR71 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AC008754 HGNC:HGNC:16719
ChiTaRS:DHX34 ProteinModelPortal:J3KR71 Ensembl:ENST00000466298
Uniprot:J3KR71
Length = 576
Score = 426 (155.0 bits), Expect = 1.6e-72, Sum P(2) = 1.6e-72
Identities = 89/196 (45%), Positives = 122/196 (62%)
Query: 626 IFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXX 685
+FD GVRK +L+TN+AETS+TI+ + FV+D GK KE SYD L WIS+
Sbjct: 340 VFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQAS 399
Query: 686 XXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFL 745
PG C+ LY YDAFA Y +PE+ R L SL LQ+KS+ +G F
Sbjct: 400 AEQRKGRAGRTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDSLVLQMKSMSVGDPRTF- 458
Query: 746 SRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCL 805
++PP P S++ AI YL+ GALD +E LT +G L+ LPV+ +GKMLILG++F+ +
Sbjct: 459 -PFIEPPPPASLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLV 517
Query: 806 DPVMTVVAGLSVRDPF 821
+PV+T+ A LSV+ PF
Sbjct: 518 EPVLTIAAALSVQSPF 533
Score = 345 (126.5 bits), Expect = 1.6e-72, Sum P(2) = 1.6e-72
Identities = 79/222 (35%), Positives = 123/222 (55%)
Query: 264 ERILRQRSLQMHEKQQAWQESPEGQ--KMLEFRRSLPSYKERDALLKAISENQVVVVSGE 321
ER+ R +H Q+ G+ K+ R +LP + + +L+ + E+QVVVV+G+
Sbjct: 128 ERVAEFRRALLHYLDFG-QKQAFGRLAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGD 186
Query: 322 TGCGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYK 381
TGCGK+TQ+PQY+L A G + + CTQPRRI+ +++++RV E + G VGY+
Sbjct: 187 TGCGKSTQVPQYLL------AAGFS-HVACTQPRRIACISLAKRVGFESLSQYGSQVGYQ 239
Query: 382 VRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXX 441
+R E + T+++F T G+ +IVDE+HER ++ DFLL V
Sbjct: 240 IRFESTRSAATKIVFLTVGLLLRQIQREPSLPQYEVLIVDEVHERHLHNDFLLGVLQRLL 299
Query: 442 XXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAY 483
MSAT+N LFSSYF AP++ +PG +P+ +
Sbjct: 300 PTRPDLKVILMSATINISLFSSYFSNAPVVQVPGRLFPITVF 341
Score = 38 (18.4 bits), Expect = 1.8e-27, Sum P(2) = 1.8e-27
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 805 LDPVMTVVAGLSVRDPFLMPF 825
LD ++ + +SV DP PF
Sbjct: 440 LDSLVLQMKSMSVGDPRTFPF 460
>UNIPROTKB|O60231 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 EMBL:BA000025 GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813 GO:GO:0003724
HOVERGEN:HBG039428 OMA:GTLHREF EMBL:AB001601 EMBL:AB011149
EMBL:BC008825 EMBL:BC009392 IPI:IPI00552073 RefSeq:NP_001157711.1
RefSeq:NP_003578.2 UniGene:Hs.485060 ProteinModelPortal:O60231
SMR:O60231 IntAct:O60231 MINT:MINT-5003862 STRING:O60231
PhosphoSite:O60231 PaxDb:O60231 PRIDE:O60231 DNASU:8449
Ensembl:ENST00000376442 Ensembl:ENST00000383577
Ensembl:ENST00000417308 Ensembl:ENST00000421095
Ensembl:ENST00000424672 Ensembl:ENST00000451456
Ensembl:ENST00000458094 GeneID:8449 KEGG:hsa:8449 UCSC:uc003nqz.3
CTD:8449 GeneCards:GC06M030620 HGNC:HGNC:2739 HPA:HPA051455
MIM:603405 neXtProt:NX_O60231 PharmGKB:PA27205 InParanoid:O60231
OrthoDB:EOG4VHK5Q PhylomeDB:O60231 GenomeRNAi:8449 NextBio:31614
ArrayExpress:O60231 Bgee:O60231 CleanEx:HS_DHX16
Genevestigator:O60231 GermOnline:ENSG00000204560 Uniprot:O60231
Length = 1041
Score = 456 (165.6 bits), Expect = 3.8e-72, Sum P(2) = 3.8e-72
Identities = 131/423 (30%), Positives = 211/423 (49%)
Query: 577 PGAVLVFMTGWDDINSLKDQLQAH-PLLGDPSRVLL-LACHGSMASSEQRLIFDKPEDGV 634
PG +LVF+TG ++I + + LQ LG R LL L + ++ S Q IF G
Sbjct: 608 PGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA 667
Query: 635 RKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXX 694
RK+V+ATN+AETS+TI +++V+D G K+ SY+ L + SK
Sbjct: 668 RKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAG 727
Query: 695 XVQPGECYHLYPRYVYD-AFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPE 753
V G+C+ LY + Y + +PE+ RT L ++ L +KSL + + F L PP
Sbjct: 728 RVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHF--DFLDPPP 785
Query: 754 PLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVA 813
++ A+E L +GAL+ LT GR ++ LPV+P L KM++ ++C + ++TV A
Sbjct: 786 YETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAA 845
Query: 814 GLSVRDP-FLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGY--EYCW 870
LSV + F P DK A++A+ F DHL L+ Y W AE SGY ++C+
Sbjct: 846 MLSVNNSIFYRPKDKVVHADNARVNFFLPG-GDHLVLLNVYTQW--AE---SGYSSQWCY 899
Query: 871 KNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDEHLIRAVICAGLFPGLCS 930
+NF+ ++++ +R+Q GL++R + D +R I AG F
Sbjct: 900 ENFVQFRSMRRARDVREQL------EGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTAR 953
Query: 931 VVNKEKSIALKTMEDGQ-VLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVSDS 989
+ +T++ Q V ++ NS + + P WL+++E + F+R + S
Sbjct: 954 LTRS----GYRTVKQQQTVFIHPNS--SLFEQQPR-WLLYHELVLTTKEFMRQVLEIESS 1006
Query: 990 VLL 992
LL
Sbjct: 1007 WLL 1009
Score = 360 (131.8 bits), Expect = 3.8e-72, Sum P(2) = 3.8e-72
Identities = 87/242 (35%), Positives = 122/242 (50%)
Query: 246 DEGLYEQQEQLVQNSVVRERILRQRSLQMHEKQQAWQESPEGQK---MLEFRRSLPSYKE 302
D E + QLV +R LQ E+ A S + Q+ + RRSLP +
Sbjct: 345 DAASQEPKYQLVLEEEETIEFVRATQLQGDEEPSAPPTSTQAQQKESIQAVRRSLPVFPF 404
Query: 303 RDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAV 362
R+ LL AI+ +QV+++ GETG GKTTQ+PQY+ E E I CTQPRR++AM+V
Sbjct: 405 REELLAAIANHQVLIIEGETGSGKTTQIPQYLFE---EGYTNKGMKIACTQPRRVAAMSV 461
Query: 363 SERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDE 422
+ RVA E G KLG VGY +R E T L + T G+ + V+VDE
Sbjct: 462 AARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDE 521
Query: 423 IHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRA 482
HER ++ D L + SAT++ FS++F AP+ IPG +PV
Sbjct: 522 AHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFRIPGRRFPVDI 581
Query: 483 YF 484
++
Sbjct: 582 FY 583
Score = 39 (18.8 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 276 EKQQAWQESPEGQKMLEF 293
E+Q+ W+E+ G L+F
Sbjct: 324 EEQRRWEEARLGAASLKF 341
Score = 39 (18.8 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 277 KQQAWQESPEGQKMLEF--RRSLPSYKERDALLKAISE 312
KQQ E PE + E R L +ERDA + + +
Sbjct: 152 KQQT--EKPESEDEWERTERERLQDLEERDAFAERVRQ 187
>CGD|CAL0004768 [details] [associations]
symbol:PRP22 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0071021
"U2-type post-spliceosomal complex" evidence=IEA] [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0004768 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AACQ01000012 InterPro:IPR022967 SMART:SM00316
KO:K12818 EMBL:AACQ01000011 RefSeq:XP_721941.1 RefSeq:XP_722102.1
ProteinModelPortal:Q5AJY8 STRING:Q5AJY8 GeneID:3636272
GeneID:3636404 KEGG:cal:CaO19.11516 KEGG:cal:CaO19.4033
Uniprot:Q5AJY8
Length = 996
Score = 473 (171.6 bits), Expect = 6.1e-72, Sum P(2) = 6.1e-72
Identities = 128/425 (30%), Positives = 215/425 (50%)
Query: 564 IEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQLQAH-PLLGDP-SRVLLLACHGSMASS 621
+E V+ I E G +LVF+TG ++I + + L LLG+ +++L + ++ S
Sbjct: 536 LESVI-QIHVSEPAGDILVFLTGQEEIETSCEALHERMKLLGENIPELIILPVYSALPSE 594
Query: 622 EQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWI 681
Q IF+ G RK++LATN+AETSITI+ + +V+D G K YD+ L + I
Sbjct: 595 MQTRIFEPTPPGSRKVILATNIAETSITIDGIYYVVDPGFVKINMYDSKLGMDSLRVTPI 654
Query: 682 SKXXXXXXXXXXXXVQPGECYHLYPRYVYDA-FADYQLPELLRTPLQSLCLQIKSLQLGS 740
SK PG+CY LY Y+ +PE+ R L L +K++ +
Sbjct: 655 SKAQANQRSGRAGRTGPGKCYRLYTEQAYEKEMIPNTIPEIQRQNLSHTILMLKAMGIHD 714
Query: 741 ISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGA 800
+ F + PP ++ A+E L I+ ALD++ NLT LGR ++ LP+EP L K LI
Sbjct: 715 LVNF--EFMDPPSTTTMLTALEDLYILDALDDDGNLTTLGRKMADLPMEPALAKTLIQSV 772
Query: 801 IFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAE 860
+ C + ++++VA LSV+ F P DK+ LA+ K++F DHL L+ + W
Sbjct: 773 EYECTEEILSIVAMLSVQTIFYRPKDKQALADQRKSRFH-HSLGDHLTLLNVFQSWC--- 828
Query: 861 RHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDEHLIRAVI 920
R+ +C NF+ ++++ +RKQ +++ G T +C +D +R
Sbjct: 829 RNNYSKTWCRDNFIQERSMRRAMEVRKQLKSIMQRFGY---KTMSCG---NDVDRVRRTF 882
Query: 921 CAGLFPGLCSVVNKEKSIALKTM-EDGQVLLY-SNSVNAGVPK-IPYPWLVFNEKIKVNS 977
C+G F + +++ KT+ E+ V L+ S+S+ P+ + Y L+ K ++
Sbjct: 883 CSGYFK---NSAKRQEGEGYKTLNENTLVYLHPSSSLYGKKPQYVIYHTLLLTSKEYMHC 939
Query: 978 VFLRD 982
V + D
Sbjct: 940 VSIID 944
Score = 339 (124.4 bits), Expect = 6.1e-72, Sum P(2) = 6.1e-72
Identities = 75/193 (38%), Positives = 105/193 (54%)
Query: 292 EFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIIC 351
E RR LP Y R LL+AI +NQ VV+ GETG GKTTQ+ QYI E G I C
Sbjct: 331 EQRRMLPVYAMRSQLLEAIRDNQFVVIVGETGSGKTTQIVQYIYEEGMNKVGGQTKLIGC 390
Query: 352 TQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXX 411
TQPRR++A +V++RV+ E G KLG++VGY +R E + +T + + T G+
Sbjct: 391 TQPRRVAAESVAKRVSEEVGCKLGDTVGYTIRFEDVTSENTVIKYMTDGMLEREALNDPN 450
Query: 412 XXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPML 471
+ +++DE HER + D L + SATL++ FS YF P++
Sbjct: 451 MNRYSVIMLDEAHERTIATDVLFALLKNAAKQNPNLKVIVTSATLDSNKFSRYFNNCPII 510
Query: 472 HIPGFTYPVRAYF 484
IPG T+PV +
Sbjct: 511 TIPGRTFPVEVLY 523
Score = 43 (20.2 bits), Expect = 8.5e-41, Sum P(2) = 8.5e-41
Identities = 12/51 (23%), Positives = 23/51 (45%)
Query: 504 DYGQEKSWKMQKQALALRKRKSSIASAVEDALEAADFREYSVQTQQSLSCW 554
D+ +EK +K +KQ K +S ++ + E + T+ +S W
Sbjct: 263 DFKEEK-FKQKKQREKEEKMQSELSDPLFQTSEPVKNSDLDPDTESFISKW 312
Score = 42 (19.8 bits), Expect = 1.1e-40, Sum P(2) = 1.1e-40
Identities = 16/68 (23%), Positives = 30/68 (44%)
Query: 145 RNKDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNYRSDLDEKRPQ 204
+N + + +V+ A D F + + + R + V+++KAP +Y + E Q
Sbjct: 482 QNPNLKVIVTSATLDSNKFSRYFNNCPIITIPGRTFPVEVLYTKAPEMDYLAAALESVIQ 541
Query: 205 REVILPFG 212
V P G
Sbjct: 542 IHVSEPAG 549
>UNIPROTKB|F1PGL2 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
GeneTree:ENSGT00700000104241 OMA:GTLHREF CTD:8449 EMBL:AAEX03008197
RefSeq:XP_538827.2 Ensembl:ENSCAFT00000000685 GeneID:481706
KEGG:cfa:481706 Uniprot:F1PGL2
Length = 1042
Score = 456 (165.6 bits), Expect = 6.2e-72, Sum P(2) = 6.2e-72
Identities = 131/423 (30%), Positives = 211/423 (49%)
Query: 577 PGAVLVFMTGWDDINSLKDQLQAH-PLLGDPSRVLL-LACHGSMASSEQRLIFDKPEDGV 634
PG +LVF+TG ++I + + LQ LG R LL L + ++ S Q IF G
Sbjct: 609 PGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA 668
Query: 635 RKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXX 694
RK+V+ATN+AETS+TI +++V+D G K+ SY+ L + SK
Sbjct: 669 RKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAG 728
Query: 695 XVQPGECYHLYPRYVYD-AFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPE 753
V G+C+ LY + Y + +PE+ RT L ++ L +KSL + + F L PP
Sbjct: 729 RVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHF--DFLDPPP 786
Query: 754 PLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVA 813
++ A+E L +GAL+ LT GR ++ LPV+P L KM++ ++C + ++TV A
Sbjct: 787 YETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAA 846
Query: 814 GLSVRDP-FLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGY--EYCW 870
LSV + F P DK A++A+ F DHL L+ Y W AE SGY ++C+
Sbjct: 847 MLSVNNSIFYRPKDKVVHADNARVNFFLPG-GDHLVLLNVYTQW--AE---SGYSSQWCY 900
Query: 871 KNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDEHLIRAVICAGLFPGLCS 930
+NF+ ++++ +R+Q GL++R + D +R I AG F
Sbjct: 901 ENFVQFRSMRRARDVREQL------EGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTAR 954
Query: 931 VVNKEKSIALKTMEDGQ-VLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVSDS 989
+ +T++ Q V ++ NS + + P WL+++E + F+R + S
Sbjct: 955 LTRS----GYRTVKQQQTVFIHPNS--SLFEEQPR-WLLYHELVLTTKEFMRQVLEIESS 1007
Query: 990 VLL 992
LL
Sbjct: 1008 WLL 1010
Score = 358 (131.1 bits), Expect = 6.2e-72, Sum P(2) = 6.2e-72
Identities = 87/242 (35%), Positives = 124/242 (51%)
Query: 246 DEGLYEQQEQLVQNSVVRERILRQRSLQMHEKQQAWQESPEGQK---MLEFRRSLPSYKE 302
D E + QLV +R LQ +E+ + Q+ + RRSLP +
Sbjct: 346 DAASQEPKYQLVLEEEETIEFVRATQLQGNEEPSGPSPPSQAQQKESVQAVRRSLPVFPF 405
Query: 303 RDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAV 362
R+ LL AI+++QV+++ GETG GKTTQ+PQY+ E E +G I CTQPRR++AM+V
Sbjct: 406 REELLAAIADHQVLIIEGETGSGKTTQIPQYLFE-EGYTKKGM--KIACTQPRRVAAMSV 462
Query: 363 SERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDE 422
+ RVA E G KLG VGY +R E T L + T G+ + V+VDE
Sbjct: 463 AARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDE 522
Query: 423 IHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRA 482
HER ++ D L + SATL+ FS++F AP+ IPG +PV
Sbjct: 523 AHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFFDDAPVFRIPGRRFPVDI 582
Query: 483 YF 484
++
Sbjct: 583 FY 584
Score = 39 (18.8 bits), Expect = 2.3e-38, Sum P(2) = 2.3e-38
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 276 EKQQAWQESPEGQKMLEF 293
E+Q+ W+E+ G L+F
Sbjct: 325 EEQRRWEEARLGAASLKF 342
>UNIPROTKB|E1BF68 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12813 GeneTree:ENSGT00700000104241 OMA:GTLHREF
CTD:8449 EMBL:DAAA02055402 IPI:IPI00691986 RefSeq:NP_001193139.1
UniGene:Bt.22201 PRIDE:E1BF68 Ensembl:ENSBTAT00000009148
GeneID:506405 KEGG:bta:506405 NextBio:20867594 Uniprot:E1BF68
Length = 1045
Score = 456 (165.6 bits), Expect = 8.0e-72, Sum P(2) = 8.0e-72
Identities = 131/423 (30%), Positives = 211/423 (49%)
Query: 577 PGAVLVFMTGWDDINSLKDQLQAH-PLLGDPSRVLL-LACHGSMASSEQRLIFDKPEDGV 634
PG +LVF+TG ++I + + LQ LG R LL L + ++ S Q IF G
Sbjct: 612 PGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA 671
Query: 635 RKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXX 694
RK+V+ATN+AETS+TI +++V+D G K+ SY+ L + SK
Sbjct: 672 RKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAG 731
Query: 695 XVQPGECYHLYPRYVYD-AFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPE 753
V G+C+ LY + Y + +PE+ RT L ++ L +KSL + + F L PP
Sbjct: 732 RVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHF--DFLDPPP 789
Query: 754 PLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVA 813
++ A+E L +GAL+ LT GR ++ LPV+P L KM++ ++C + ++TV A
Sbjct: 790 YETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAA 849
Query: 814 GLSVRDP-FLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGY--EYCW 870
LSV + F P DK A++A+ F DHL L+ Y W AE SGY ++C+
Sbjct: 850 MLSVNNSIFYRPKDKVVHADNARVNFFLPG-GDHLVLLNVYTQW--AE---SGYSSQWCY 903
Query: 871 KNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDEHLIRAVICAGLFPGLCS 930
+NF+ ++++ +R+Q GL++R + D +R I AG F
Sbjct: 904 ENFVQFRSMRRARDVREQL------EGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTAR 957
Query: 931 VVNKEKSIALKTMEDGQ-VLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVSDS 989
+ +T++ Q V ++ NS + + P WL+++E + F+R + S
Sbjct: 958 LTRS----GYRTVKQQQTVFIHPNS--SLFEEQPR-WLLYHELVLTTKEFMRQVLEIESS 1010
Query: 990 VLL 992
LL
Sbjct: 1011 WLL 1013
Score = 357 (130.7 bits), Expect = 8.0e-72, Sum P(2) = 8.0e-72
Identities = 88/242 (36%), Positives = 123/242 (50%)
Query: 246 DEGLYEQQEQLVQNSVVRERILRQRSLQMHEKQQAWQESPEGQK---MLEFRRSLPSYKE 302
D E + QLV +R LQ E+ A + Q+ + RRSLP +
Sbjct: 349 DAASQEPKYQLVLEEEETIEFVRATQLQGDEEPSAPPAPTQAQQKESIQAVRRSLPVFPF 408
Query: 303 RDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAV 362
R+ LL AI+ +QV+++ GETG GKTTQ+PQY+ E E +G I CTQPRR++AM+V
Sbjct: 409 REELLAAIANHQVLIIEGETGSGKTTQIPQYLFE-EGYTKKGM--KIACTQPRRVAAMSV 465
Query: 363 SERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDE 422
+ RVA E G KLG VGY +R E T L + T G+ + V+VDE
Sbjct: 466 AARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDE 525
Query: 423 IHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRA 482
HER ++ D L + SATL+ FS++F AP+ IPG +PV
Sbjct: 526 AHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFFDDAPIFRIPGRRFPVDI 585
Query: 483 YF 484
++
Sbjct: 586 FY 587
Score = 40 (19.1 bits), Expect = 1.8e-38, Sum P(2) = 1.8e-38
Identities = 17/64 (26%), Positives = 29/64 (45%)
Query: 251 EQQEQLVQNSVVRERILRQRSLQMHEKQQAWQESPEGQKMLEF--RRSLPSYKERDALLK 308
E +E+ + V E+ R+ +K+Q E PE + E R L +ERDA +
Sbjct: 133 EAEEEDEEEEQVSEKGKRKTG---EKKEQT--EKPESEDEWERTERERLQDLEERDAFAE 187
Query: 309 AISE 312
+ +
Sbjct: 188 RVRQ 191
Score = 40 (19.1 bits), Expect = 1.8e-38, Sum P(2) = 1.8e-38
Identities = 45/213 (21%), Positives = 85/213 (39%)
Query: 95 EQQTSNYGRY--AYQDESSD--DSDREFGSTQQQMCGSTLDNIDEWRWKLTMLLRNKDE- 149
E+Q S G+ + E ++ +S+ E+ T+++ L+ D + ++ R+KD
Sbjct: 141 EEQVSEKGKRKTGEKKEQTEKPESEDEWERTERERL-QDLEERDAFAERVRQ--RDKDRT 197
Query: 150 QEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNYRSDLD-EKRPQREVI 208
+ V+ R+ D++ +E+ +M R+ A V K Y + + EK E
Sbjct: 198 RNVLERS--DKKAYEEAQK-RLKMAEEDRK-AMVPELRKKSRREYLAKREREKLEDLEAE 253
Query: 209 LP-----FGLLREVDAHLKAYLSQKY-INASMSSLSNVGSTTNDEGL--YEQQEQLVQNS 260
L FG + E+ H + L K + G E Y E+
Sbjct: 254 LADEEFLFGDV-ELSRHERRELRYKRRVRDLAREYRAAGEQEKLEATNRYHMPEETRGQP 312
Query: 261 VVRERILRQRSLQMHEKQQAWQESPEGQKMLEF 293
++ + S E+Q+ W+E+ G L+F
Sbjct: 313 ARTVDLVEEESGAPGEEQRRWEEARLGAASLKF 345
>UNIPROTKB|Q17R09 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K12815
EMBL:BC118085 IPI:IPI00690755 RefSeq:NP_001069266.1
UniGene:Bt.42896 ProteinModelPortal:Q17R09 STRING:Q17R09
PRIDE:Q17R09 GeneID:520046 KEGG:bta:520046 CTD:9785
NextBio:20873012 Uniprot:Q17R09
Length = 1227
Score = 424 (154.3 bits), Expect = 9.1e-72, Sum P(2) = 9.1e-72
Identities = 121/425 (28%), Positives = 206/425 (48%)
Query: 577 PGAVLVFMTGWDDINSLKDQLQAH-PLLGDPSRVLLLACHGSMASSEQRLIFDKPEDGVR 635
PG +L+FM G +DI DQ+ H L + + +L + + S Q IF K DGVR
Sbjct: 740 PGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQAKIFQKAPDGVR 799
Query: 636 KIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXXX 695
K ++ATN+AETS+T++ ++FVID G K ++ L IS+
Sbjct: 800 KCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGR 859
Query: 696 VQPGECYHLYPRYVY-DAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPEP 754
PG+C+ LY + Y + +PE+ RT L ++ L +KSL + + +F + PP
Sbjct: 860 TGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQF--HFMDPPPE 917
Query: 755 LSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAG 814
++ N++ L I+GALD LT GR + P++P L KMLI+ C ++ +V+
Sbjct: 918 DNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSM 977
Query: 815 LSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYEYCWKN-- 872
LSV F P +++ ++ + +F+ + SDHL+ + Y WK+ + Y W N
Sbjct: 978 LSVPAIFYRPKGREEESDQIREKFAVPE-SDHLSYLNVYLQWKN-----NNYSTIWCNDH 1031
Query: 873 FLSAQTLKAIDSLRKQFLFLLKDAGLVDR-NTENCNKWSHDEHLIRAVICAGLFPGLCSV 931
F+ A+ ++ + +R Q LKD + R + +C D ++R ICA F +
Sbjct: 1032 FIHAKAMRKVREVRAQ----LKDIMVQQRMSLASCGT---DWDIVRKCICAAYFHQAAKL 1084
Query: 932 VNKEKSIALKTMEDGQVL-LYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVSDSV 990
+ + ++T G L+ S G+ P ++V++E + +++ T V
Sbjct: 1085 KGIGEYVNIRT---GMPCHLHPTSSLFGMGYTP-DYIVYHELVMTTKEYMQCVTAVDGEW 1140
Query: 991 LLLFG 995
L G
Sbjct: 1141 LAELG 1145
Score = 393 (143.4 bits), Expect = 9.1e-72, Sum P(2) = 9.1e-72
Identities = 117/362 (32%), Positives = 176/362 (48%)
Query: 132 NIDEWRWKLTMLLRNKDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKV---VVFSK 188
N D RW+ +L + VV R + D DFE+ SA + +H+ + +VF+K
Sbjct: 371 NEDNERWETNRMLTSG----VVHRLEVDE-DFEEDSAAKVHLMVHNLVPPFLDGRIVFTK 425
Query: 189 APLP-----NYRSDLDE-KRPQREVILPFGLLREVDAHLKAYLSQKYINASMSSLSNVGS 242
P P + SDL R + + RE KA K+ + + L ++
Sbjct: 426 QPEPVIPVKDATSDLAIIARKGSQTVRKH---REQKERKKA--QHKHWELAGTKLGDIMG 480
Query: 243 TTNDEGLYEQQEQLVQNSVVRERILRQRSLQMHEKQQAWQESPEGQKMLEFRRSLPSYKE 302
+E E + L ++ V R ++ + M +K +A E + + +LE R+ LP +
Sbjct: 481 VKKEE---EPDKSLTEDGKVDYRTEQKFADHMKKKSEASSEFAKKKSILEQRQYLPIFAV 537
Query: 303 RDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAV 362
+ LL I +N +V+V GETG GKTTQL QY+ E + G I CTQPRR++AM+V
Sbjct: 538 QQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHE-DGYTDYGM---IGCTQPRRVAAMSV 593
Query: 363 SERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDE 422
++RV+ E G LGE VGY +R E T + + T GI + +I+DE
Sbjct: 594 AKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLREADLDHYSAIIMDE 653
Query: 423 IHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRA 482
HER +N D L + SAT++AE F+S+FG P+ HIPG T+PV
Sbjct: 654 AHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPGRTFPVDI 713
Query: 483 YF 484
F
Sbjct: 714 LF 715
Score = 46 (21.3 bits), Expect = 2.9e-35, Sum P(2) = 2.9e-35
Identities = 12/53 (22%), Positives = 22/53 (41%)
Query: 142 MLLRNKDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNY 194
++ R D + +V+ A D F + R + ++FSK P +Y
Sbjct: 671 VVARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDY 723
Score = 41 (19.5 bits), Expect = 9.6e-35, Sum P(2) = 9.6e-35
Identities = 31/122 (25%), Positives = 43/122 (35%)
Query: 187 SKAPLPNYRSDLDEKRPQ-REVILPFGLLREVDAHLKAYLSQKYINASMSSLSNVGST-- 243
S +P P+YR RP R+ D L S KY N ++GST
Sbjct: 232 SPSPTPSYRDSERSHRPSSRDRDRSVRSRYSDDTPLPTP-SYKY-NEWADDRRHLGSTPR 289
Query: 244 -TNDEGLYEQQEQLVQNSVVRERILRQRSLQMHEKQQAWQESPEGQKMLEFRRSLPSYKE 302
+ G E E+ + ER +Q + + W EG EF L +Y
Sbjct: 290 LSRGRGRREDGEEGISFDTEEER--QQWEDDQRQADRDWYMMDEGYD--EFHNPL-AYSS 344
Query: 303 RD 304
D
Sbjct: 345 DD 346
>UNIPROTKB|F1RU83 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:GTLHREF EMBL:CU480634
Ensembl:ENSSSCT00000001498 Uniprot:F1RU83
Length = 1045
Score = 456 (165.6 bits), Expect = 1.7e-71, Sum P(2) = 1.7e-71
Identities = 131/423 (30%), Positives = 211/423 (49%)
Query: 577 PGAVLVFMTGWDDINSLKDQLQAH-PLLGDPSRVLL-LACHGSMASSEQRLIFDKPEDGV 634
PG +LVF+TG ++I + + LQ LG R LL L + ++ S Q IF G
Sbjct: 612 PGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA 671
Query: 635 RKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXX 694
RK+V+ATN+AETS+TI +++V+D G K+ SY+ L + SK
Sbjct: 672 RKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAG 731
Query: 695 XVQPGECYHLYPRYVYD-AFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPE 753
V G+C+ LY + Y + +PE+ RT L ++ L +KSL + + F L PP
Sbjct: 732 RVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHF--DFLDPPP 789
Query: 754 PLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVA 813
++ A+E L +GAL+ LT GR ++ LPV+P L KM++ ++C + ++TV A
Sbjct: 790 YETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAA 849
Query: 814 GLSVRDP-FLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGY--EYCW 870
LSV + F P DK A++A+ F DHL L+ Y W AE SGY ++C+
Sbjct: 850 MLSVNNSIFYRPKDKVVHADNARVNFFLPG-GDHLVLLNVYTQW--AE---SGYSSQWCY 903
Query: 871 KNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDEHLIRAVICAGLFPGLCS 930
+NF+ ++++ +R+Q GL++R + D +R I AG F
Sbjct: 904 ENFVQFRSMRRARDVREQL------EGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTAR 957
Query: 931 VVNKEKSIALKTMEDGQ-VLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVSDS 989
+ +T++ Q V ++ NS + + P WL+++E + F+R + S
Sbjct: 958 LTRS----GYRTVKQQQTVFIHPNS--SLFEEQPR-WLLYHELVLTTKEFMRQVLEIESS 1010
Query: 990 VLL 992
LL
Sbjct: 1011 WLL 1013
Score = 354 (129.7 bits), Expect = 1.7e-71, Sum P(2) = 1.7e-71
Identities = 86/242 (35%), Positives = 123/242 (50%)
Query: 246 DEGLYEQQEQLVQNSVVRERILRQRSLQMHEKQQAWQESPEGQK---MLEFRRSLPSYKE 302
D E + QLV +R LQ E+ A + Q+ + RRSLP +
Sbjct: 349 DAASQEPKYQLVLEEEETIEFVRATQLQGDEEPAAPPAPTQAQQKESIQAVRRSLPVFPF 408
Query: 303 RDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAV 362
R+ LL A++ +Q++++ GETG GKTTQ+PQY+ E E +G I CTQPRR++AM+V
Sbjct: 409 REELLAAVANHQILIIEGETGSGKTTQIPQYLFE-EGYTQKGM--KIACTQPRRVAAMSV 465
Query: 363 SERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDE 422
+ RVA E G KLG VGY +R E T L + T G+ + V+VDE
Sbjct: 466 AARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDE 525
Query: 423 IHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRA 482
HER ++ D L + SATL+ FS++F AP+ IPG +PV
Sbjct: 526 AHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFFDDAPVFRIPGRRFPVDI 585
Query: 483 YF 484
++
Sbjct: 586 FY 587
Score = 39 (18.8 bits), Expect = 2.3e-38, Sum P(2) = 2.3e-38
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 276 EKQQAWQESPEGQKMLEF 293
E+Q+ W+E+ G L+F
Sbjct: 328 EEQRRWEEARLGAASLKF 345
>UNIPROTKB|Q767K6 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 EMBL:AB113357 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB113356 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
RefSeq:NP_001116578.1 UniGene:Ssc.15273 ProteinModelPortal:Q767K6
GeneID:100144456 KEGG:ssc:100144456 Uniprot:Q767K6
Length = 1045
Score = 456 (165.6 bits), Expect = 1.7e-71, Sum P(2) = 1.7e-71
Identities = 131/423 (30%), Positives = 211/423 (49%)
Query: 577 PGAVLVFMTGWDDINSLKDQLQAH-PLLGDPSRVLL-LACHGSMASSEQRLIFDKPEDGV 634
PG +LVF+TG ++I + + LQ LG R LL L + ++ S Q IF G
Sbjct: 612 PGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA 671
Query: 635 RKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXX 694
RK+V+ATN+AETS+TI +++V+D G K+ SY+ L + SK
Sbjct: 672 RKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAG 731
Query: 695 XVQPGECYHLYPRYVYD-AFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPE 753
V G+C+ LY + Y + +PE+ RT L ++ L +KSL + + F L PP
Sbjct: 732 RVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHF--DFLDPPP 789
Query: 754 PLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVA 813
++ A+E L +GAL+ LT GR ++ LPV+P L KM++ ++C + ++TV A
Sbjct: 790 YETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAA 849
Query: 814 GLSVRDP-FLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGY--EYCW 870
LSV + F P DK A++A+ F DHL L+ Y W AE SGY ++C+
Sbjct: 850 MLSVNNSIFYRPKDKVVHADNARVNFFLPG-GDHLVLLNVYTQW--AE---SGYSSQWCY 903
Query: 871 KNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDEHLIRAVICAGLFPGLCS 930
+NF+ ++++ +R+Q GL++R + D +R I AG F
Sbjct: 904 ENFVQFRSMRRARDVREQL------EGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTAR 957
Query: 931 VVNKEKSIALKTMEDGQ-VLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVSDS 989
+ +T++ Q V ++ NS + + P WL+++E + F+R + S
Sbjct: 958 LTRS----GYRTVKQQQTVFIHPNS--SLFEEQPR-WLLYHELVLTTKEFMRQVLEIESS 1010
Query: 990 VLL 992
LL
Sbjct: 1011 WLL 1013
Score = 354 (129.7 bits), Expect = 1.7e-71, Sum P(2) = 1.7e-71
Identities = 86/242 (35%), Positives = 123/242 (50%)
Query: 246 DEGLYEQQEQLVQNSVVRERILRQRSLQMHEKQQAWQESPEGQK---MLEFRRSLPSYKE 302
D E + QLV +R LQ E+ A + Q+ + RRSLP +
Sbjct: 349 DAASQEPKYQLVLEEEETIEFVRATQLQGDEEPAAPPAPTQAQQKESIQAVRRSLPVFPF 408
Query: 303 RDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAV 362
R+ LL A++ +Q++++ GETG GKTTQ+PQY+ E E +G I CTQPRR++AM+V
Sbjct: 409 REELLAAVANHQILIIEGETGSGKTTQIPQYLFE-EGYTQKGM--KIACTQPRRVAAMSV 465
Query: 363 SERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDE 422
+ RVA E G KLG VGY +R E T L + T G+ + V+VDE
Sbjct: 466 AARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDE 525
Query: 423 IHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRA 482
HER ++ D L + SATL+ FS++F AP+ IPG +PV
Sbjct: 526 AHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFFDDAPVFRIPGRRFPVDI 585
Query: 483 YF 484
++
Sbjct: 586 FY 587
Score = 39 (18.8 bits), Expect = 2.3e-38, Sum P(2) = 2.3e-38
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 276 EKQQAWQESPEGQKMLEF 293
E+Q+ W+E+ G L+F
Sbjct: 328 EEQRRWEEARLGAASLKF 345
>UNIPROTKB|G4MTU4 [details] [associations]
symbol:MGG_11351 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp16" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12815 RefSeq:XP_003713740.1 EnsemblFungi:MGG_11351T0
GeneID:5051310 KEGG:mgr:MGG_11351 Uniprot:G4MTU4
Length = 999
Score = 453 (164.5 bits), Expect = 1.8e-71, Sum P(2) = 1.8e-71
Identities = 119/421 (28%), Positives = 216/421 (51%)
Query: 578 GAVLVFMTGWDDINSLKDQLQAH-PLLGDPSRVLLLACHGSMASSEQRLIFDKPEDGVRK 636
G +LVFMTG +DI + ++ L DP ++ +L + M + Q IFD+ GVRK
Sbjct: 512 GDILVFMTGQEDIEVTCELVRERLDALNDPPKLSILPIYSQMPADLQAKIFDRAPPGVRK 571
Query: 637 IVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXXXV 696
++ATN+AETS+T++ +++V+D G +K Y+ L + IS+
Sbjct: 572 CIVATNIAETSLTVDGIMYVVDAGYSKLKVYNPKMGMDTLQITPISQANASQRSGRAGRT 631
Query: 697 QPGECYHLYPRYVY-DAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPEPL 755
PG+ + L+ + D +PE+ RT L + L IKSL + + +F + PP
Sbjct: 632 GPGKAFRLFTEKAFKDELYIQTIPEIQRTNLSNTILLIKSLGVKDMLDF--DFMDPPPQD 689
Query: 756 SVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGL 815
++ ++ L +GALD ++T LGR ++ P++P L K++I+ + C + ++T+V+ L
Sbjct: 690 TMTTSLFDLWALGALDNLGDMTDLGRKMNFFPMDPPLAKLIIMAEEYGCTEEMITIVSML 749
Query: 816 SVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYEYCWKNFLS 875
SV + F P ++++ +++A+ +F + SDHL + Y WK A H + C ++FL
Sbjct: 750 SVPNVFYRPKERQEESDAAREKFFVPE-SDHLTFLHVYSQWK-ANGHSDAW--CSRHFLH 805
Query: 876 AQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDEHLIRAVICAGLFPGLCSVVNKE 935
+++L+ +R Q L ++K + + +C D ++R IC+G + V
Sbjct: 806 SKSLRRAKEVRDQLLDIMKTQKM---DIVSCGT---DWDVVRRCICSGYYHQAAKVKGIG 859
Query: 936 KSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVSDSVLLLFG 995
+ I L+T Q L+ S G+ +P ++V++E I + ++ T V L G
Sbjct: 860 EYINLRTSVTVQ--LHPTSALYGLGFLP-DYVVYHELILTSKEYMSTVTSVDPMWLADLG 916
Query: 996 G 996
G
Sbjct: 917 G 917
Score = 356 (130.4 bits), Expect = 1.8e-71, Sum P(2) = 1.8e-71
Identities = 92/269 (34%), Positives = 138/269 (51%)
Query: 226 SQKYINASMSSLSNV----GSTTNDEGLYEQQEQLVQNSVVRERILRQRSLQMHEKQQAW 281
+Q N + ++L N+ G D L +Q V E+ + S M + A
Sbjct: 230 AQDATNMAGTALGNLMGIKGEEDGDSALPVPDDQ-APAEVKAEKSDNKFSEHMKKNDGAS 288
Query: 282 QESPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEA 341
S + + + E R LP++ R+ L++ I +NQV++V GETG GKTTQL Q++ E
Sbjct: 289 NFS-QTKSIREQREFLPAFAVREDLMRVIRDNQVIIVVGETGSGKTTQLTQFLYED---- 343
Query: 342 ARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGI 401
G I CTQPRR++AM+V++RV+ E KLG +VGY +R E +DT + + T G+
Sbjct: 344 GYGQLGMIGCTQPRRVAAMSVAKRVSEEMEVKLGGTVGYAIRFEDCTSKDTVIKYMTDGV 403
Query: 402 XXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELF 461
+ +I+DE HER +N D L+ + SAT+NA+ F
Sbjct: 404 LLRESLNEPDLDRYSCIIMDEAHERALNTDVLMGLFKKILQRRRDLKLIVTSATMNAKRF 463
Query: 462 SSYFGGAPMLHIPGFTYPVRAYFLENILE 490
S +FGGAP IPG T+PV F + +E
Sbjct: 464 SDFFGGAPDFTIPGRTFPVDVMFSRSPVE 492
Score = 53 (23.7 bits), Expect = 1.3e-39, Sum P(2) = 1.3e-39
Identities = 13/53 (24%), Positives = 27/53 (50%)
Query: 142 MLLRNKDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNY 194
+L R +D + +V+ A + + F A + R + V+FS++P+ +Y
Sbjct: 442 ILQRRRDLKLIVTSATMNAKRFSDFFGGAPDFTIPGRTFPVDVMFSRSPVEDY 494
>UNIPROTKB|E2RC56 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 KO:K12815 OMA:PSRSTWE CTD:9785
EMBL:AAEX03004090 RefSeq:XP_536800.2 ProteinModelPortal:E2RC56
Ensembl:ENSCAFT00000032225 GeneID:479669 KEGG:cfa:479669
NextBio:20854813 Uniprot:E2RC56
Length = 1226
Score = 423 (154.0 bits), Expect = 1.9e-71, Sum P(2) = 1.9e-71
Identities = 121/425 (28%), Positives = 205/425 (48%)
Query: 577 PGAVLVFMTGWDDINSLKDQLQAH-PLLGDPSRVLLLACHGSMASSEQRLIFDKPEDGVR 635
PG +L+FM G +DI DQ+ H L + + +L + + S Q IF K DGVR
Sbjct: 739 PGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQAKIFQKAPDGVR 798
Query: 636 KIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXXX 695
K ++ATN+AETS+T++ ++FVID G K ++ L IS+
Sbjct: 799 KCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGR 858
Query: 696 VQPGECYHLYPRYVY-DAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPEP 754
PG+C+ LY + Y + +PE+ RT L ++ L +KSL + + +F + PP
Sbjct: 859 TGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQF--HFMDPPPE 916
Query: 755 LSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAG 814
++ N++ L I+GALD LT GR + P++P L KMLI+ C ++ +V+
Sbjct: 917 DNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSM 976
Query: 815 LSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYEYCWKN-- 872
LSV F P +++ ++ + +F+ + SDHL + Y WK+ + Y W N
Sbjct: 977 LSVPAIFYRPKGREEESDQIREKFAVPE-SDHLTYLNVYLQWKN-----NNYSTIWCNDH 1030
Query: 873 FLSAQTLKAIDSLRKQFLFLLKDAGLVDR-NTENCNKWSHDEHLIRAVICAGLFPGLCSV 931
F+ A+ ++ + +R Q LKD + R + +C D ++R ICA F +
Sbjct: 1031 FIHAKAMRKVREVRAQ----LKDIMVQQRMSLASCGT---DWDIVRKCICAAYFHQAAKL 1083
Query: 932 VNKEKSIALKTMEDGQVL-LYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVSDSV 990
+ + ++T G L+ S G+ P ++V++E + +++ T V
Sbjct: 1084 KGIGEYVNIRT---GMPCHLHPTSSLFGMGYTP-DYIVYHELVMTTKEYMQCVTAVDGEW 1139
Query: 991 LLLFG 995
L G
Sbjct: 1140 LAELG 1144
Score = 391 (142.7 bits), Expect = 1.9e-71, Sum P(2) = 1.9e-71
Identities = 117/362 (32%), Positives = 177/362 (48%)
Query: 132 NIDEWRWKLTMLLRNKDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKV---VVFSK 188
N D RW+ +L + VV R + D DFE+ SA + +H+ + +VF+K
Sbjct: 370 NEDNERWETNRMLTSG----VVHRLEVDE-DFEEDSAAKVHLMVHNLVPPFLDGRIVFTK 424
Query: 189 APLP-----NYRSDLDE-KRPQREVILPFGLLREVDAHLKAYLSQKYINASMSSLSNVGS 242
P P + SDL R + + RE KA K+ + + L ++
Sbjct: 425 QPEPVIPVKDATSDLAIIARKGSQTVRKH---REQKERKKA--QHKHWELAGTKLGDIMG 479
Query: 243 TTNDEGLYEQQEQLVQNSVVRERILRQRSLQMHEKQQAWQESPEGQKMLEFRRSLPSYKE 302
+E E + L ++ V R ++ + M +K +A E + + +LE R+ LP +
Sbjct: 480 VKKEE---EPDKALTEDGKVDYRTEQKFADHMKKKSEASSEFAKKKSILEQRQYLPIFAV 536
Query: 303 RDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAV 362
+ LL I +N +V+V GETG GKTTQL QY+ E + G I CTQPRR++AM+V
Sbjct: 537 QQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHE-DGYTDYGM---IGCTQPRRVAAMSV 592
Query: 363 SERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDE 422
++RV+ E G LGE VGY +R E +T + + T GI + VI+DE
Sbjct: 593 AKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREADLDHYSAVIMDE 652
Query: 423 IHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRA 482
HER +N D L + SAT++AE F+++FG P+ HIPG T+PV
Sbjct: 653 AHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFAAFFGNVPIFHIPGRTFPVDI 712
Query: 483 YF 484
F
Sbjct: 713 LF 714
Score = 45 (20.9 bits), Expect = 4.7e-35, Sum P(2) = 4.7e-35
Identities = 12/53 (22%), Positives = 22/53 (41%)
Query: 142 MLLRNKDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNY 194
++ R D + +V+ A D F + R + ++FSK P +Y
Sbjct: 670 VVARRSDLKLIVTSATMDAEKFAAFFGNVPIFHIPGRTFPVDILFSKTPQEDY 722
>WB|WBGene00018967 [details] [associations]
symbol:F56D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0040022 "feminization of
hermaphroditic germ-line" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 477 (173.0 bits), Expect = 2.0e-71, Sum P(2) = 2.0e-71
Identities = 134/434 (30%), Positives = 227/434 (52%)
Query: 570 HIVKKERPGAVLVFMTGWDDINSLKDQLQAH-PLLG-DPSRVLLLACHGSMASSEQRLIF 627
H+V+ E G +L+F+TG ++I ++ LG D + + + ++ + Q+ IF
Sbjct: 287 HMVE-EVEGDILLFLTGQEEIEEACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRIF 345
Query: 628 D-----KPEDGV-RKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWI 681
+ +P + RK V++TN+AETS+TI+ VVFVID G +K+ Y+ LL I
Sbjct: 346 EPAPPNRPNGAISRKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPI 405
Query: 682 SKXXXXXXXXXXXXVQPGECYHLYPRYVYDA-FADYQLPELLRTPLQSLCLQIKSLQLGS 740
SK +PG+C+ LY Y + D PE+LR+ L S+ LQ+K L
Sbjct: 406 SKASAMQRAGRAGRTKPGKCFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTED 465
Query: 741 ISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGA 800
+ F + PP P ++ A+E L + A++++ LT LG ++ P++P+L KMLI
Sbjct: 466 LVHF--DFMDPPAPETLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITST 523
Query: 801 IFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAE 860
NC + ++++ A LSV ++ P + + A+ AKA+F+ D DHL L+ Y +K
Sbjct: 524 ELNCSNEILSITAMLSVPQCWVRPNEMRTEADEAKARFAHID-GDHLTLLNVYHSFK--- 579
Query: 861 RHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDEHL-IRAV 919
++Q ++C+ NF++ +T+K D++R Q ++ L R K S D +L IR
Sbjct: 580 QNQEDPQWCYDNFINYRTMKTADTVRTQLSRVMDKYNL--RRVSTDFK-SRDYYLNIRKA 636
Query: 920 ICAGLFPGLCSVVNKEKSIALKTMEDGQVL-LYSNSVNAGVPKIPYPWLVFNEKIKVNSV 978
+ AG F V + E+S T++D Q++ L+ ++V P+ W ++NE +
Sbjct: 637 LVAGFF---MQVAHLERSGHYVTVKDNQLVNLHPSTVLDHKPE----WALYNEFVLTTKN 689
Query: 979 FLRDSTGVSDSVLL 992
F+R T V LL
Sbjct: 690 FIRTVTDVRPEWLL 703
Score = 319 (117.4 bits), Expect = 2.0e-71, Sum P(2) = 2.0e-71
Identities = 71/200 (35%), Positives = 104/200 (52%)
Query: 292 EFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGA----AC 347
E R LP ++ ++ ++ + NQ + + GETG GKTTQ+PQ+ +E + +G A
Sbjct: 71 EKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQPPGQAR 130
Query: 348 SIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXX 407
+ CTQPRR++AM+V+ RVA E LG+ VGY +R E T L +CT G+
Sbjct: 131 LVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLLREAM 190
Query: 408 XXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGG 467
+I+DE HER + D L+ + MSATL+A F YF
Sbjct: 191 NSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGKFQRYFED 250
Query: 468 APMLHIPGFTYPVRAYFLEN 487
P+L +PG T+PV +F N
Sbjct: 251 CPLLSVPGRTFPVEIFFTPN 270
>UNIPROTKB|Q20875 [details] [associations]
symbol:F56D2.6 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase F56D2.6" species:6239 "Caenorhabditis
elegans" [GO:0030686 "90S preribosome" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006364 "rRNA processing"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 477 (173.0 bits), Expect = 2.0e-71, Sum P(2) = 2.0e-71
Identities = 134/434 (30%), Positives = 227/434 (52%)
Query: 570 HIVKKERPGAVLVFMTGWDDINSLKDQLQAH-PLLG-DPSRVLLLACHGSMASSEQRLIF 627
H+V+ E G +L+F+TG ++I ++ LG D + + + ++ + Q+ IF
Sbjct: 287 HMVE-EVEGDILLFLTGQEEIEEACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRIF 345
Query: 628 D-----KPEDGV-RKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWI 681
+ +P + RK V++TN+AETS+TI+ VVFVID G +K+ Y+ LL I
Sbjct: 346 EPAPPNRPNGAISRKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPI 405
Query: 682 SKXXXXXXXXXXXXVQPGECYHLYPRYVYDA-FADYQLPELLRTPLQSLCLQIKSLQLGS 740
SK +PG+C+ LY Y + D PE+LR+ L S+ LQ+K L
Sbjct: 406 SKASAMQRAGRAGRTKPGKCFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTED 465
Query: 741 ISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGA 800
+ F + PP P ++ A+E L + A++++ LT LG ++ P++P+L KMLI
Sbjct: 466 LVHF--DFMDPPAPETLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITST 523
Query: 801 IFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAE 860
NC + ++++ A LSV ++ P + + A+ AKA+F+ D DHL L+ Y +K
Sbjct: 524 ELNCSNEILSITAMLSVPQCWVRPNEMRTEADEAKARFAHID-GDHLTLLNVYHSFK--- 579
Query: 861 RHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDEHL-IRAV 919
++Q ++C+ NF++ +T+K D++R Q ++ L R K S D +L IR
Sbjct: 580 QNQEDPQWCYDNFINYRTMKTADTVRTQLSRVMDKYNL--RRVSTDFK-SRDYYLNIRKA 636
Query: 920 ICAGLFPGLCSVVNKEKSIALKTMEDGQVL-LYSNSVNAGVPKIPYPWLVFNEKIKVNSV 978
+ AG F V + E+S T++D Q++ L+ ++V P+ W ++NE +
Sbjct: 637 LVAGFF---MQVAHLERSGHYVTVKDNQLVNLHPSTVLDHKPE----WALYNEFVLTTKN 689
Query: 979 FLRDSTGVSDSVLL 992
F+R T V LL
Sbjct: 690 FIRTVTDVRPEWLL 703
Score = 319 (117.4 bits), Expect = 2.0e-71, Sum P(2) = 2.0e-71
Identities = 71/200 (35%), Positives = 104/200 (52%)
Query: 292 EFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGA----AC 347
E R LP ++ ++ ++ + NQ + + GETG GKTTQ+PQ+ +E + +G A
Sbjct: 71 EKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQPPGQAR 130
Query: 348 SIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXX 407
+ CTQPRR++AM+V+ RVA E LG+ VGY +R E T L +CT G+
Sbjct: 131 LVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLLREAM 190
Query: 408 XXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGG 467
+I+DE HER + D L+ + MSATL+A F YF
Sbjct: 191 NSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGKFQRYFED 250
Query: 468 APMLHIPGFTYPVRAYFLEN 487
P+L +PG T+PV +F N
Sbjct: 251 CPLLSVPGRTFPVEIFFTPN 270
>DICTYBASE|DDB_G0285213 [details] [associations]
symbol:dhx15 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285213 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 EMBL:AAFI02000076 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12820 OMA:TVLQIHA RefSeq:XP_638323.1
ProteinModelPortal:Q54NJ4 EnsemblProtists:DDB0233403 GeneID:8624993
KEGG:ddi:DDB_G0285213 Uniprot:Q54NJ4
Length = 727
Score = 464 (168.4 bits), Expect = 2.0e-71, Sum P(2) = 2.0e-71
Identities = 128/419 (30%), Positives = 217/419 (51%)
Query: 575 ERPGAVLVFMTGWDDINSLKDQLQAHPLLGDPSRVLLLACHGSMASSEQRLIFDKPEDGV 634
E G +LVF+TG ++I ++Q + L + S+ +Q IFD ++
Sbjct: 284 EGTGDILVFLTGEEEIEDTCAKIQRETRERGLPPMKTLPLYSSLPIYQQSKIFDTCKE-- 341
Query: 635 RKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXX 694
RK +++TN+AETS+TI+ +VFV+D G +K+ +Y+ + LL + ISK
Sbjct: 342 RKCIVSTNIAETSLTIDGIVFVVDPGFSKQKTYNPRSRVESLLVAPISKASANQRAGRAG 401
Query: 695 XVQPGECYHLYPRYVYDAFADYQL-PELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPE 753
+PG+C+ LY + Q PE+LR+ L S+ LQ+ L+LG + + PP
Sbjct: 402 RTRPGKCFRLYTEKAFKELMIQQTHPEILRSNLASVVLQL--LKLGVVDLVHFDFMDPPV 459
Query: 754 PLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVA 813
P ++ A+E L +GALD+ LT +G +S P++P+L KMLI+ A +C + ++T+ A
Sbjct: 460 PDTLIRALEVLHYLGALDDEGQLTEIGSIMSEFPLDPQLSKMLIVSAERSCSNEILTIAA 519
Query: 814 GLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYEYCWKNF 873
LS + F+ P D + A+SAK F D DHL ++ Y +K ++ +C+ NF
Sbjct: 520 MLSAPNCFMRPKDNRIEADSAKKSFDHFD-GDHLTMLNVYHSFK---KNGEDPTWCYDNF 575
Query: 874 LSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDEHLIRAVICAGLFPGLCSVVN 933
L+ + +K DS+R Q +L L + + +K+ ++ I+ I AG F V
Sbjct: 576 LNHRAIKQADSVRSQLARILTRFKLPLVSGDVNSKFYYEN--IKKCIAAGFF---MQVAK 630
Query: 934 KEKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVSDSVLL 992
EK T+ D Q +++ S G+ + P + ++NE + + ++R T V LL
Sbjct: 631 CEKKNIYFTLGDEQSVIFHPST--GLTRRP-EFCIYNEFVLTSENYIRTITDVKFDWLL 686
Score = 333 (122.3 bits), Expect = 2.0e-71, Sum P(2) = 2.0e-71
Identities = 80/259 (30%), Positives = 133/259 (51%)
Query: 235 SSLSNVGSTTNDEGLYEQQEQLVQNSVVRERILRQR--SLQMHEKQQAW---QE--SPEG 287
SS SN + + E++E+ + N+ +++ + W +E S
Sbjct: 8 SSDSNKKAMKKQQNKIEEEEEEITNTTTTTTTTNNNYNNIKSNLTIDQWIPKKETFSKRY 67
Query: 288 QKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAAC 347
++LE R+ LP +K+++ +K I ENQVV++ GETG GKTTQ+PQ+++++ G
Sbjct: 68 YEILEKRKELPVWKQKEDFIKVIKENQVVILVGETGSGKTTQIPQFVVDAGL-IRPGKMV 126
Query: 348 SIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXX 407
+ TQPRR++A++V++RV+ E +LGE VGY +R E + T + + T G+
Sbjct: 127 GV--TQPRRVAAISVAKRVSEEMDFELGEEVGYSIRFEELSSARTFMKYLTDGMLLRESM 184
Query: 408 XXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGG 467
+I+DE HER ++ D L + MSATL A F YF
Sbjct: 185 SDPTLNKYDVIILDEAHERTLSTDILFGLIKDILKRRKDLKLIVMSATLEAGKFQKYFEN 244
Query: 468 APMLHIPGFTYPVRAYFLE 486
AP++ +PG +PV ++ E
Sbjct: 245 APLIKVPGRLHPVEIFYTE 263
>RGD|1302963 [details] [associations]
symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box polypeptide 16"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1302963 GO:GO:0005524 GO:GO:0003676 EMBL:BX883048
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
HOVERGEN:HBG039428 CTD:8449 EMBL:CH474118 IPI:IPI00421973
RefSeq:NP_997661.1 UniGene:Rn.6832 GeneID:294232 KEGG:rno:294232
UCSC:RGD:1302963 NextBio:637799 Genevestigator:Q6MG13
Uniprot:Q6MG13
Length = 1044
Score = 452 (164.2 bits), Expect = 2.2e-71, Sum P(2) = 2.2e-71
Identities = 130/423 (30%), Positives = 210/423 (49%)
Query: 577 PGAVLVFMTGWDDINSLKDQLQAH-PLLGDPSRVLL-LACHGSMASSEQRLIFDKPEDGV 634
PG +LVF+TG ++I + + LQ LG R LL L + ++ S Q IF G
Sbjct: 611 PGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA 670
Query: 635 RKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXX 694
RK+V+ATN+AETS+TI +++V+D G K+ SY+ L + SK
Sbjct: 671 RKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAG 730
Query: 695 XVQPGECYHLYPRYVYD-AFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPE 753
V G+C+ LY + Y + +PE+ RT L ++ L +KSL + + F L PP
Sbjct: 731 RVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHF--DFLDPPP 788
Query: 754 PLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVA 813
++ A+E L +GAL+ LT GR ++ LPV+P L KM++ ++C + ++TV A
Sbjct: 789 YETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAA 848
Query: 814 GLSVRDP-FLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGY--EYCW 870
LSV + F P DK A++A+ F DHL L+ Y W AE SGY ++C+
Sbjct: 849 MLSVNNSIFYRPKDKVVHADNARVNFFLPG-GDHLVLLNVYTQW--AE---SGYSSQWCY 902
Query: 871 KNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDEHLIRAVICAGLFPGLCS 930
+NF+ ++++ +R+Q GL++R D +R I +G F
Sbjct: 903 ENFVQFRSMRRARDVREQL------EGLLERVEVGLTSCQGDYVRVRKAITSGYFYHTAR 956
Query: 931 VVNKEKSIALKTMEDGQ-VLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVSDS 989
+ +T++ Q V ++ NS + + P WL+++E + F+R + S
Sbjct: 957 LTRS----GYRTVKQQQTVFIHPNS--SLFEQQPR-WLLYHELVLTTKEFMRQVLEIESS 1009
Query: 990 VLL 992
LL
Sbjct: 1010 WLL 1012
Score = 357 (130.7 bits), Expect = 2.2e-71, Sum P(2) = 2.2e-71
Identities = 87/243 (35%), Positives = 124/243 (51%)
Query: 246 DEGLYEQQEQLVQNSVVRERILRQRSLQMHEKQQAWQ----ESPEGQKMLEFRRSLPSYK 301
D E Q QLV +R LQ E+ + ++ + + + RRSLP +
Sbjct: 347 DAAAQEPQYQLVLEEDETIEFVRAAQLQGDEEPSSGPPLSAQAQQKESIQAVRRSLPVFP 406
Query: 302 ERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRRISAMA 361
R+ LL AI+ +QV+++ GETG GKTTQ+PQY+ E E +G I CTQPRR++AM+
Sbjct: 407 FREELLTAIANHQVLIIEGETGSGKTTQIPQYLFE-EGYTKKGM--KIACTQPRRVAAMS 463
Query: 362 VSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVD 421
V+ RVA E G KLG VGY +R E T L + T G+ + V+VD
Sbjct: 464 VAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVD 523
Query: 422 EIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVR 481
E HER ++ D L + SATL+ FS++F AP+ IPG +PV
Sbjct: 524 EAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSAFFDDAPVFRIPGRRFPVD 583
Query: 482 AYF 484
++
Sbjct: 584 IFY 586
Score = 45 (20.9 bits), Expect = 1.5e-38, Sum P(2) = 1.5e-38
Identities = 33/125 (26%), Positives = 50/125 (40%)
Query: 266 ILRQRSLQMHEKQQAWQESPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCG 325
I+ + S E+Q+ W+E+ L+F RDA A E Q +V E
Sbjct: 316 IVEEESGAPGEEQRRWEEARLDAASLKFGA-------RDA---AAQEPQYQLVLEEDETI 365
Query: 326 KTTQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRL- 384
+ + Q L+ + E + G S Q I A+ S V R E L ++V +
Sbjct: 366 EFVRAAQ--LQGDEEPSSGPPLSAQAQQKESIQAVRRSLPVFPFREELLTAIANHQVLII 423
Query: 385 EGMKG 389
EG G
Sbjct: 424 EGETG 428
>WB|WBGene00003392 [details] [associations]
symbol:mog-4 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0048589
"developmental growth" evidence=IMP] [GO:0010172 "embryonic body
morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001482 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0002119 GO:GO:0008380 GO:GO:0006810 GO:GO:0018996
GO:GO:0006397 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0048589 GO:GO:0010172 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12813 EMBL:AF286900 EMBL:Z81462
EMBL:Z81457 PIR:T18832 RefSeq:NP_497027.1 UniGene:Cel.17139
ProteinModelPortal:O45244 SMR:O45244 DIP:DIP-24771N IntAct:O45244
MINT:MINT-1105817 STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6
GeneID:175117 KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117
WormBase:C04H5.6 GeneTree:ENSGT00700000104241 InParanoid:O45244
OMA:GTLHREF NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 436 (158.5 bits), Expect = 2.4e-71, Sum P(2) = 2.4e-71
Identities = 125/420 (29%), Positives = 212/420 (50%)
Query: 577 PGAVLVFMTGWDDINSLKDQL-QAHPLLGDPSRVLL-LACHGSMASSEQRLIFDKPEDGV 634
PG +LVF+TG ++I ++++ L + LG + L+ L + ++ S Q IF+
Sbjct: 574 PGDILVFLTGQEEIETVQEALMERSKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKDA 633
Query: 635 RKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXX 694
RK+VLATN+AETS+TI+ + +VID G +K+ S+DA + L ISK
Sbjct: 634 RKVVLATNIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGRAG 693
Query: 695 XVQPGECYHLYPRYVYDAFADYQ-LPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPE 753
PG+C+ LY + Y + Q +PE+ RT L ++ L +KSL + + F L PP
Sbjct: 694 RTGPGKCFRLYTAWAYKHELEEQPIPEIQRTNLGNVVLMLKSLGIHDLVHF--DFLDPPP 751
Query: 754 PLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVA 813
++ A+E L +GAL+ LT LGR ++ P +P + KM+I + C + ++T+ A
Sbjct: 752 QETLVIALEQLYALGALNHRGELTKLGRRMAEFPCDPCMSKMIIASEKYECSEEIVTIAA 811
Query: 814 GLSVRDP-FLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYEYCWKN 872
LS F P + A+SA+ F + DH+ L+ Y+ W+++ Q +C +N
Sbjct: 812 MLSCNAAVFYRPKAQVIHADSARKGFWS-PAGDHITLMNVYNKWQESSFSQ---RWCVEN 867
Query: 873 FLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDEHLIRAVICAGLFPGLCSVV 932
++ +T+K +R Q + GL++R E K S D IR I AG F + +
Sbjct: 868 YVQHRTMKRARDVRDQLV------GLLER-VEIETKSSTDTIKIRKAITAGYFYNVSKLD 920
Query: 933 NKEKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVSDSVLL 992
N KT++ + + + + P W+V+ E + + F+R+ + + LL
Sbjct: 921 NTGH---YKTVKHKHTT-HPHPNSCLFEETPR-WVVYFELVFTSKEFMREMSEIESGWLL 975
Score = 373 (136.4 bits), Expect = 2.4e-71, Sum P(2) = 2.4e-71
Identities = 94/256 (36%), Positives = 141/256 (55%)
Query: 234 MSSLSNVGSTTNDEGLYEQQEQLVQNSVVRERILRQRSLQMH-EKQQAWQESPEGQKML- 291
M+S+ ++G+ D EQ+ +L+ + E++ ++LQM ++ + E +KM
Sbjct: 304 MASMLHLGA--KDAKRKEQEFELLLD----EKVDFIQALQMPGTNEEVVETEAEKKKMSI 357
Query: 292 -EFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSII 350
E R+SLP Y RDA ++A+ E+QV+++ GETG GKTTQLPQY+ E+ G I
Sbjct: 358 EETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGF--CEGGK-RIG 414
Query: 351 CTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXX 410
CTQPRR++AM+V+ RVA E G KLG VGY +R E T L + T G+
Sbjct: 415 CTQPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFLNEP 474
Query: 411 XXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPM 470
+ +++DE HER ++ D L + SATL+AE FSS+F AP+
Sbjct: 475 DLASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSSFFDDAPI 534
Query: 471 LHIPGFTYPVRAYFLE 486
IPG +PV Y+ +
Sbjct: 535 FRIPGRRFPVDIYYTQ 550
Score = 39 (18.8 bits), Expect = 3.2e-36, Sum P(2) = 3.2e-36
Identities = 11/48 (22%), Positives = 22/48 (45%)
Query: 147 KDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNY 194
KD + ++S A D F A + R++ + +++AP +Y
Sbjct: 509 KDLKLLISSATLDAEKFSSFFDDAPIFRIPGRRFPVDIYYTQAPEADY 556
Score = 38 (18.4 bits), Expect = 4.1e-36, Sum P(2) = 4.1e-36
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 502 IDDYGQEKSWKMQKQALALRKRKSSIASAVEDAL 535
I + + +M +QA + R+R + A E L
Sbjct: 55 IQSFADQLMSRMPRQATSARQRGPTTAELAEQEL 88
Score = 37 (18.1 bits), Expect = 5.2e-36, Sum P(2) = 5.2e-36
Identities = 9/22 (40%), Positives = 11/22 (50%)
Query: 519 ALRKRKSSIASAVEDALEAADF 540
AL K+ S VE +A DF
Sbjct: 28 ALAKKAKSAPDLVEKLRDAGDF 49
>UNIPROTKB|O45244 [details] [associations]
symbol:mog-4 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-4" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001482 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0002119
GO:GO:0008380 GO:GO:0006810 GO:GO:0018996 GO:GO:0006397
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 EMBL:AF286900 EMBL:Z81462 EMBL:Z81457 PIR:T18832
RefSeq:NP_497027.1 UniGene:Cel.17139 ProteinModelPortal:O45244
SMR:O45244 DIP:DIP-24771N IntAct:O45244 MINT:MINT-1105817
STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6 GeneID:175117
KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117 WormBase:C04H5.6
GeneTree:ENSGT00700000104241 InParanoid:O45244 OMA:GTLHREF
NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 436 (158.5 bits), Expect = 2.4e-71, Sum P(2) = 2.4e-71
Identities = 125/420 (29%), Positives = 212/420 (50%)
Query: 577 PGAVLVFMTGWDDINSLKDQL-QAHPLLGDPSRVLL-LACHGSMASSEQRLIFDKPEDGV 634
PG +LVF+TG ++I ++++ L + LG + L+ L + ++ S Q IF+
Sbjct: 574 PGDILVFLTGQEEIETVQEALMERSKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKDA 633
Query: 635 RKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXX 694
RK+VLATN+AETS+TI+ + +VID G +K+ S+DA + L ISK
Sbjct: 634 RKVVLATNIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGRAG 693
Query: 695 XVQPGECYHLYPRYVYDAFADYQ-LPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPE 753
PG+C+ LY + Y + Q +PE+ RT L ++ L +KSL + + F L PP
Sbjct: 694 RTGPGKCFRLYTAWAYKHELEEQPIPEIQRTNLGNVVLMLKSLGIHDLVHF--DFLDPPP 751
Query: 754 PLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVA 813
++ A+E L +GAL+ LT LGR ++ P +P + KM+I + C + ++T+ A
Sbjct: 752 QETLVIALEQLYALGALNHRGELTKLGRRMAEFPCDPCMSKMIIASEKYECSEEIVTIAA 811
Query: 814 GLSVRDP-FLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYEYCWKN 872
LS F P + A+SA+ F + DH+ L+ Y+ W+++ Q +C +N
Sbjct: 812 MLSCNAAVFYRPKAQVIHADSARKGFWS-PAGDHITLMNVYNKWQESSFSQ---RWCVEN 867
Query: 873 FLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDEHLIRAVICAGLFPGLCSVV 932
++ +T+K +R Q + GL++R E K S D IR I AG F + +
Sbjct: 868 YVQHRTMKRARDVRDQLV------GLLER-VEIETKSSTDTIKIRKAITAGYFYNVSKLD 920
Query: 933 NKEKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVSDSVLL 992
N KT++ + + + + P W+V+ E + + F+R+ + + LL
Sbjct: 921 NTGH---YKTVKHKHTT-HPHPNSCLFEETPR-WVVYFELVFTSKEFMREMSEIESGWLL 975
Score = 373 (136.4 bits), Expect = 2.4e-71, Sum P(2) = 2.4e-71
Identities = 94/256 (36%), Positives = 141/256 (55%)
Query: 234 MSSLSNVGSTTNDEGLYEQQEQLVQNSVVRERILRQRSLQMH-EKQQAWQESPEGQKML- 291
M+S+ ++G+ D EQ+ +L+ + E++ ++LQM ++ + E +KM
Sbjct: 304 MASMLHLGA--KDAKRKEQEFELLLD----EKVDFIQALQMPGTNEEVVETEAEKKKMSI 357
Query: 292 -EFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSII 350
E R+SLP Y RDA ++A+ E+QV+++ GETG GKTTQLPQY+ E+ G I
Sbjct: 358 EETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGF--CEGGK-RIG 414
Query: 351 CTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXX 410
CTQPRR++AM+V+ RVA E G KLG VGY +R E T L + T G+
Sbjct: 415 CTQPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFLNEP 474
Query: 411 XXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPM 470
+ +++DE HER ++ D L + SATL+AE FSS+F AP+
Sbjct: 475 DLASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSSFFDDAPI 534
Query: 471 LHIPGFTYPVRAYFLE 486
IPG +PV Y+ +
Sbjct: 535 FRIPGRRFPVDIYYTQ 550
Score = 39 (18.8 bits), Expect = 3.2e-36, Sum P(2) = 3.2e-36
Identities = 11/48 (22%), Positives = 22/48 (45%)
Query: 147 KDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNY 194
KD + ++S A D F A + R++ + +++AP +Y
Sbjct: 509 KDLKLLISSATLDAEKFSSFFDDAPIFRIPGRRFPVDIYYTQAPEADY 556
Score = 38 (18.4 bits), Expect = 4.1e-36, Sum P(2) = 4.1e-36
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 502 IDDYGQEKSWKMQKQALALRKRKSSIASAVEDAL 535
I + + +M +QA + R+R + A E L
Sbjct: 55 IQSFADQLMSRMPRQATSARQRGPTTAELAEQEL 88
Score = 37 (18.1 bits), Expect = 5.2e-36, Sum P(2) = 5.2e-36
Identities = 9/22 (40%), Positives = 11/22 (50%)
Query: 519 ALRKRKSSIASAVEDALEAADF 540
AL K+ S VE +A DF
Sbjct: 28 ALAKKAKSAPDLVEKLRDAGDF 49
>SGD|S000000815 [details] [associations]
symbol:PRP22 "DEAH-box RNA-dependent ATPase/ATP-dependent RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IMP] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IDA;IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IMP;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IMP] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0071021 "U2-type post-spliceosomal complex"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 SGD:S000000815 GO:GO:0005524 KO:K01897
GO:GO:0003723 EMBL:BK006939 EMBL:U18778 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0071007 InterPro:IPR022967
SMART:SM00316 GO:GO:0000390 GeneTree:ENSGT00700000104241 KO:K12818
GO:GO:0000350 RefSeq:NP_010931.3 GeneID:856734 KEGG:sce:YER015W
OrthoDB:EOG45TGW9 EMBL:X58681 PIR:S13643 RefSeq:NP_010929.3
ProteinModelPortal:P24384 SMR:P24384 DIP:DIP-655N IntAct:P24384
MINT:MINT-648209 STRING:P24384 PaxDb:P24384 EnsemblFungi:YER013W
GeneID:856732 KEGG:sce:YER013W CYGD:YER013w OMA:QITQYLD
NextBio:982846 Genevestigator:P24384 GermOnline:YER013W
GO:GO:0071021 Uniprot:P24384
Length = 1145
Score = 471 (170.9 bits), Expect = 4.2e-71, Sum P(2) = 4.2e-71
Identities = 128/437 (29%), Positives = 216/437 (49%)
Query: 570 HIVKKERPGAVLVFMTGWDDINSLKDQLQAH-PLLGDP-SRVLLLACHGSMASSEQRLIF 627
HI E PG +LVF+TG ++I+S + L LGD +L+L + ++ S Q IF
Sbjct: 686 HI--NEGPGDILVFLTGQEEIDSCCEILYDRVKTLGDSIGELLILPVYSALPSEIQSKIF 743
Query: 628 DKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXX 687
+ G RK+V ATN+AETSITI+ + +V+D G AK Y+A L+ S IS+
Sbjct: 744 EPTPKGSRKVVFATNIAETSITIDGIYYVVDPGFAKINIYNARAGIEQLIVSPISQAQAN 803
Query: 688 XXXXXXXXVQPGECYHLYPRYV-YDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLS 746
PG+CY LY Y+ + +PE+ R L L +K++ + + +F
Sbjct: 804 QRKGRAGRTGPGKCYRLYTESAFYNEMLENTVPEIQRQNLSHTILMLKAMGINDLLKF-- 861
Query: 747 RALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLD 806
+ PP + NA+ L + +LD+ LT LG+ +S+ P++P L + L+ C D
Sbjct: 862 DFMDPPPKNLMLNALTELYHLQSLDDEGKLTNLGKEMSLFPMDPTLSRSLLSSVDNQCSD 921
Query: 807 PVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGY 866
++T+++ LSV++ F P D++ A+S KA+F Y DHL L+ Y W+ A +
Sbjct: 922 EIVTIISMLSVQNVFYRPKDRQLEADSKKAKFH-HPYGDHLTLLNVYTRWQQANYSE--- 977
Query: 867 EYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDEHLIRAVICAGLFP 926
+YC NFL + LK ++ Q + K GL +C+ D LIR +G F
Sbjct: 978 QYCKTNFLHFRHLKRARDVKSQISMIFKKIGL---KLISCHS---DPDLIRKTFVSGFF- 1030
Query: 927 GLCSVVNKEKSIALKTMEDG-QVLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTG 985
+ ++ + KT+ G +V ++ +S G Y +++++ + + ++ T
Sbjct: 1031 --MNAAKRDSQVGYKTINGGTEVGIHPSSSLYGKE---YEYVMYHSIVLTSREYMSQVTS 1085
Query: 986 VSDSVLLLFGGNISRGG 1002
+ LL + + G
Sbjct: 1086 IEPQWLLEVAPHFYKAG 1102
Score = 336 (123.3 bits), Expect = 4.2e-71, Sum P(2) = 4.2e-71
Identities = 74/191 (38%), Positives = 109/191 (57%)
Query: 294 RRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQ 353
R++LP Y R L++A+ +NQ +V+ GETG GKTTQ+ QY L+ E + G I CTQ
Sbjct: 480 RQTLPVYAMRSELIQAVRDNQFLVIVGETGSGKTTQITQY-LDEEGFSNYGM---IGCTQ 535
Query: 354 PRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXX 413
PRR++A++V++RVA E G K+G VGY +R E + G DTR+ + T G+
Sbjct: 536 PRRVAAVSVAKRVAEEVGCKVGHDVGYTIRFEDVTGPDTRIKYMTDGMLQREALLDPEMS 595
Query: 414 GVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHI 473
+ +++DE HER + D L + SATLN+ FS YF P+++I
Sbjct: 596 KYSVIMLDEAHERTVATDVLFALLKKAAIKRPELKVIVTSATLNSAKFSEYFLNCPIINI 655
Query: 474 PGFTYPVRAYF 484
PG T+PV +
Sbjct: 656 PGKTFPVEVLY 666
Score = 59 (25.8 bits), Expect = 6.0e-42, Sum P(2) = 6.0e-42
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 485 LENILEMTRYRLNTYNQIDDYGQEKSWKM--QKQALALRKRKSSIASAVED 533
L+N L +T + N N+ YG+ S + Q+Q L + +S + AV D
Sbjct: 448 LKNQLIVTEWEKNRMNESISYGKRTSLPISAQRQTLPVYAMRSELIQAVRD 498
Score = 48 (22.0 bits), Expect = 8.6e-41, Sum P(2) = 8.6e-41
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 491 MTRYRLNTYNQIDDYGQEKSWKMQKQALALRKRKS 525
M R +N N I D+ +EK K ++ +RK++S
Sbjct: 396 MNRSAINGSNAIRDHREEKLRKKREIEQQIRKQQS 430
>RGD|1310345 [details] [associations]
symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box polypeptide 38"
species:10116 "Rattus norvegicus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310345
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OrthoDB:EOG4Z62MS
IPI:IPI00371467 PRIDE:D4A321 Ensembl:ENSRNOT00000019810
UCSC:RGD:1310345 Uniprot:D4A321
Length = 1228
Score = 423 (154.0 bits), Expect = 6.4e-71, Sum P(2) = 6.4e-71
Identities = 121/425 (28%), Positives = 205/425 (48%)
Query: 577 PGAVLVFMTGWDDINSLKDQLQAH-PLLGDPSRVLLLACHGSMASSEQRLIFDKPEDGVR 635
PG +L+FM G +DI DQ+ H L + + +L + + S Q IF K DGVR
Sbjct: 741 PGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQAKIFQKAPDGVR 800
Query: 636 KIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXXX 695
K ++ATN+AETS+T++ ++FVID G K ++ L IS+
Sbjct: 801 KCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGR 860
Query: 696 VQPGECYHLYPRYVY-DAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPEP 754
PG+C+ LY + Y + +PE+ RT L ++ L +KSL + + +F + PP
Sbjct: 861 TGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQF--HFMDPPPE 918
Query: 755 LSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAG 814
++ N++ L I+GALD LT GR + P++P L KMLI+ C ++ +V+
Sbjct: 919 DNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSM 978
Query: 815 LSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYEYCWKN-- 872
LSV F P +++ ++ + +F+ + SDHL + Y WK+ + Y W N
Sbjct: 979 LSVPAIFYRPKGREEESDQIREKFAVPE-SDHLTYLNVYLQWKN-----NNYSTIWCNDH 1032
Query: 873 FLSAQTLKAIDSLRKQFLFLLKDAGLVDR-NTENCNKWSHDEHLIRAVICAGLFPGLCSV 931
F+ A+ ++ + +R Q LKD + R + +C D ++R ICA F +
Sbjct: 1033 FIHAKAMRKVREVRAQ----LKDIMVQQRMSLASCGT---DWDIVRKCICAAYFHQAAKL 1085
Query: 932 VNKEKSIALKTMEDGQVL-LYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVSDSV 990
+ + ++T G L+ S G+ P ++V++E + +++ T V
Sbjct: 1086 KGIGEYVNIRT---GMPCHLHPTSSLFGMGYTP-DYIVYHELVMTTKEYMQCVTAVDGEW 1141
Query: 991 LLLFG 995
L G
Sbjct: 1142 LAELG 1146
Score = 386 (140.9 bits), Expect = 6.4e-71, Sum P(2) = 6.4e-71
Identities = 114/362 (31%), Positives = 176/362 (48%)
Query: 132 NIDEWRWKLTMLLRNKDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKV---VVFSK 188
N D RW+ +L + VV R + D DFE+ +A + +H+ + +VF+K
Sbjct: 372 NEDNERWETNRMLTSG----VVHRLEVDE-DFEEDNAAKVHLMVHNLVPPFLDGRIVFTK 426
Query: 189 APLP-----NYRSDLDE-KRPQREVILPFGLLREVDAHLKAYLSQKYINASMSSLSNVGS 242
P P + SDL R + + RE KA K+ + + L ++
Sbjct: 427 QPEPVIPVKDATSDLAIIARKGSQTVRKH---REQKERRKA--QHKHWELAGTKLGDIMG 481
Query: 243 TTNDEGLYEQQEQLVQNSVVRERILRQRSLQMHEKQQAWQESPEGQKMLEFRRSLPSYKE 302
+E E + + ++ V R ++ + M EK +A E + + +LE R+ LP +
Sbjct: 482 VKKEE---EPDKAMTEDGKVDYRTEQKFADHMKEKSEASSEFAKKKSILEQRQYLPIFAV 538
Query: 303 RDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAV 362
+ LL I +N +V+V GETG GKTTQL QY L + G I CTQPRR++AM+V
Sbjct: 539 QQELLTIIRDNSIVIVVGETGSGKTTQLTQY-LHQDGYTDYGM---IGCTQPRRVAAMSV 594
Query: 363 SERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDE 422
++RV+ E G LGE VGY +R E +T + + T GI + +I+DE
Sbjct: 595 AKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREADLDHYSAIIMDE 654
Query: 423 IHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRA 482
HER +N D L + SAT++A+ F+++FG P+ HIPG T+PV
Sbjct: 655 AHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDADKFAAFFGNVPIFHIPGRTFPVDI 714
Query: 483 YF 484
F
Sbjct: 715 LF 716
Score = 43 (20.2 bits), Expect = 7.6e-35, Sum P(2) = 7.6e-35
Identities = 12/53 (22%), Positives = 22/53 (41%)
Query: 142 MLLRNKDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNY 194
++ R D + +V+ A D F + R + ++FSK P +Y
Sbjct: 672 VVARRSDLKLIVTSATMDADKFAAFFGNVPIFHIPGRTFPVDILFSKTPQEDY 724
>ASPGD|ASPL0000006947 [details] [associations]
symbol:AN5827 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813
OMA:RIDDHRD OrthoDB:EOG4SBJ63 RefSeq:XP_663431.1
ProteinModelPortal:Q5B0V3 EnsemblFungi:CADANIAT00007219
GeneID:2871194 KEGG:ani:AN5827.2 Uniprot:Q5B0V3
Length = 1128
Score = 469 (170.2 bits), Expect = 6.6e-71, Sum P(2) = 6.6e-71
Identities = 124/415 (29%), Positives = 213/415 (51%)
Query: 577 PGAVLVFMTGWDDINSLKDQLQ--AHPLLGDPSRVLLLACHGSMASSEQRLIFDKPEDGV 634
PG +LVF+TG ++I + + LQ A L +++ + ++ S Q IF+
Sbjct: 690 PGDILVFLTGQEEIEAAEQSLQETARKLGNKIPEMIICPIYANLPSDLQAKIFEPTPPKA 749
Query: 635 RKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXX 694
RK+VLATN+AETS+TI+ +V+VID G KE ++ L+ + S+
Sbjct: 750 RKVVLATNIAETSLTIDGIVYVIDPGFVKENVFNPRTGMESLVVTPCSRASANQRAGRAG 809
Query: 695 XVQPGECYHLYPRYVY-DAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPE 753
V PG+C+ LY ++ Y + + PE+ RT L S+ L +KSL + + EF + PP
Sbjct: 810 RVGPGKCFRLYTKWAYYNELEESTTPEIQRTNLSSVILMLKSLGIDQLLEF--DFMDPPP 867
Query: 754 PLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVA 813
++ A+E L +GAL++ LT +GR ++ P +P L K ++ C++ V+++V+
Sbjct: 868 AETIIRALEQLYALGALNDRGELTKIGRQMAEFPTDPMLAKAILAADKHGCVEEVLSIVS 927
Query: 814 GLSVRDP-FLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYEYCW-- 870
L F P DKK A+SA+ +F+ +D DHL L+ ++ W D++ + Y W
Sbjct: 928 MLGEASALFFRPKDKKIHADSARNRFTVKDGGDHLTLLNIWNQWVDSD-----FSYVWAK 982
Query: 871 KNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDEHLIRAVICAGLFPGLCS 930
+NFL ++L +R Q L K V+ +C S++ I+ I AG FP
Sbjct: 983 ENFLQQRSLTRARDVRDQ---LAKLCDRVEVTVSSCG--SNNIVPIQKAITAGFFPNAAR 1037
Query: 931 VVNKEKSIALKTMEDGQ-VLLYSNSVNAGV-PKIPYPWLVFNEKIKVNSVFLRDS 983
+ S +T++ GQ V L+ +S V P+ W+++ E + + ++R +
Sbjct: 1038 LQRGGDSY--RTIKTGQTVYLHPSSTLFEVNPR----WVIYFELVLTSKEYMRSN 1086
Score = 336 (123.3 bits), Expect = 6.6e-71, Sum P(2) = 6.6e-71
Identities = 82/249 (32%), Positives = 129/249 (51%)
Query: 246 DEGLYE------QQEQLVQNSVVR--ERILRQRSLQMHEKQQAWQESPEGQKMLEFRRSL 297
DEG YE Q+ ++ ++ +++ Q + EK Q + Q + + R+ L
Sbjct: 424 DEGDYEYVFDDTQRINFTMDAQMKGTRKLMTQEQRMLQEKLD--QAEQKAQTIEDTRKKL 481
Query: 298 PSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRRI 357
P Y+ RD +++A+ ++QV+++ GETG GKTTQLPQY+ E+ G + CTQPRR+
Sbjct: 482 PIYQFRDQIIQAVHDHQVLIIVGETGSGKTTQLPQYLHEAGY-TKNGM--KVGCTQPRRV 538
Query: 358 SAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXGVTH 417
+AM+V+ RVA E G KLG VGY +R E T L + T G+ +
Sbjct: 539 AAMSVAARVAEEMGVKLGNEVGYSIRFEDNTSDKTVLKYMTDGMLLRELLTEPDLGQYSA 598
Query: 418 VIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFT 477
+++DE HER + D + SAT++A+ F SYF AP+ +IPG
Sbjct: 599 LMIDEAHERTVPTDIACGLLKDIAKARPDLKLLISSATMDAQKFQSYFDNAPIFNIPGRM 658
Query: 478 YPVRAYFLE 486
Y V ++ +
Sbjct: 659 YNVDIHYTQ 667
Score = 60 (26.2 bits), Expect = 4.0e-41, Sum P(3) = 4.0e-41
Identities = 39/168 (23%), Positives = 69/168 (41%)
Query: 148 DEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVF--SKAPLPNYRSDLDEKRPQR 205
D +E R +K RD E+ ALA R+ + +K +V +K R L + R
Sbjct: 229 DPEERKERERK--RDLEERDALAKRLASKDDKRSKKIVEDRTKDSEAARRRALADDAKAR 286
Query: 206 EVILPFGLLREVDAHLKAYLSQKYINASMSSLSNVGSTTNDEGLYEQQ-EQLVQNSVVRE 264
+ +P LR +LK +++ + L ++ E+ +N V
Sbjct: 287 DAAMPDLRLRSRQEYLKKRETERLALLRRQVAEETQELRENPNLTRREKEEFARNREVL- 345
Query: 265 RILRQRSLQMHEKQQAWQESPEGQKMLEFRRSLPSYKERDALLKAISE 312
RI +R L++ + + + PE + E + + K+ DAL K E
Sbjct: 346 RIAEER-LRIDDHRDGYM-MPEDY-ITE-KGKIDRKKKEDALYKRYVE 389
Score = 40 (19.1 bits), Expect = 9.3e-40, Sum P(2) = 9.3e-40
Identities = 11/47 (23%), Positives = 21/47 (44%)
Query: 148 DEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNY 194
D + ++S A D + F+ A + R Y + +++ P NY
Sbjct: 627 DLKLLISSATMDAQKFQSYFDNAPIFNIPGRMYNVDIHYTQQPEANY 673
Score = 38 (18.4 bits), Expect = 4.0e-41, Sum P(3) = 4.0e-41
Identities = 11/52 (21%), Positives = 20/52 (38%)
Query: 567 VLCHIVK---KERPGAVLVFMTGWDDINSLKDQLQAHPLLGDPSRVLLLACH 615
+ C ++K K RP L+ + D + P+ P R+ + H
Sbjct: 613 IACGLLKDIAKARPDLKLLISSATMDAQKFQSYFDNAPIFNIPGRMYNVDIH 664
>FB|FBgn0033160 [details] [associations]
symbol:CG11107 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC;ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0016779 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA EMBL:AY058484 RefSeq:NP_610269.1 UniGene:Dm.4189
SMR:Q7K3M5 STRING:Q7K3M5 EnsemblMetazoa:FBtr0088966 GeneID:35654
KEGG:dme:Dmel_CG11107 UCSC:CG11107-RA FlyBase:FBgn0033160
InParanoid:Q7K3M5 OrthoDB:EOG4D254T GenomeRNAi:35654 NextBio:794560
Uniprot:Q7K3M5
Length = 729
Score = 473 (171.6 bits), Expect = 9.9e-71, Sum P(2) = 9.9e-71
Identities = 130/424 (30%), Positives = 225/424 (53%)
Query: 574 KERPGAVLVFMTGWDDINSLKDQLQAH-PLLGDP-SRVLLLACHGSMASSEQRLIFDK-- 629
+E G +L+F+TG ++I +++ LG + + + ++ + Q+ IF+
Sbjct: 279 EEIEGDILMFLTGQEEIEEACKRIKREIDNLGSEIGELKCIPLYSTLPPNLQQRIFEPAP 338
Query: 630 -PE-DGV--RKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXX 685
P +G RK+V++TN+AETS+TI+ VVFVID G AK+ Y+ LL S ISK
Sbjct: 339 PPNANGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKAS 398
Query: 686 XXXXXXXXXXVQPGECYHLYPRYVY-DAFADYQLPELLRTPLQSLCLQIKSLQLGSISEF 744
+PG+C+ LY + + D PE+LR+ L ++ LQ+K L + + F
Sbjct: 399 AQQRSGRAGRTRPGKCFRLYTEKAFKNEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHF 458
Query: 745 LSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNC 804
+ PP P ++ A+E L + ALD++ NLT LG +S P++P+L KMLI NC
Sbjct: 459 --DFMDPPAPETLMRALELLNYLAALDDDGNLTDLGAVMSEFPLDPQLAKMLIASCQHNC 516
Query: 805 LDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQS 864
+ ++++ A LSV F+ P + K A+ AK +F+ D DHL L+ Y +K + +
Sbjct: 517 SNEILSITAMLSVPQCFVRPNEAKKAADEAKMRFAHID-GDHLTLLNVYHAFKQSSEDPN 575
Query: 865 GYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDEHL-IRAVICAG 923
+C++NF++ ++LK+ D++R+Q ++ L +TE +K D ++ IR + G
Sbjct: 576 ---WCYENFINFRSLKSADNVRQQLARIMDRFNLRRTSTEFTSK---DYYVNIRKALVQG 629
Query: 924 LFPGLCSVVNKEKSIALKTMEDGQ-VLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRD 982
F V + E++ T++D Q V L+ ++ P W+++NE + ++R
Sbjct: 630 FF---MQVAHLERTGYYLTIKDNQNVQLHPSTCLDHKPD----WVIYNEFVLTTKNYIRT 682
Query: 983 STGV 986
T V
Sbjct: 683 VTDV 686
Score = 316 (116.3 bits), Expect = 9.9e-71, Sum P(2) = 9.9e-71
Identities = 68/197 (34%), Positives = 106/197 (53%)
Query: 288 QKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAAC 347
Q + + R +LP ++ + ++ +S +Q +V+ GETG GKTTQ+PQ+ ++ R
Sbjct: 63 QNLYKKRIALPVFEYQADFMRLLSLHQCIVLVGETGSGKTTQIPQWCVDFAVSKGRKG-- 120
Query: 348 SIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXX 407
+ CTQPRR++AM+V++RV+ E KLGE VGY +R E T L + T G+
Sbjct: 121 -VSCTQPRRVAAMSVAQRVSEEMDVKLGEEVGYSIRFEDCSTAKTLLKYMTDGMLLREAM 179
Query: 408 XXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGG 467
+++DE HER + D L+ V MSATL+A F YF
Sbjct: 180 SDPMLDQYQVILLDEAHERTLATDILMGVLKEVIRQRSDLKLVVMSATLDAGKFQQYFDN 239
Query: 468 APMLHIPGFTYPVRAYF 484
AP++ +PG T+PV ++
Sbjct: 240 APLMKVPGRTHPVEIFY 256
>ASPGD|ASPL0000070923 [details] [associations]
symbol:AN4721 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003723
EMBL:BN001303 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 EMBL:AACD01000080 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
OMA:NAWCYEN OrthoDB:EOG45TGW9 RefSeq:XP_662325.1
ProteinModelPortal:Q5B409 EnsemblFungi:CADANIAT00005708
GeneID:2872518 KEGG:ani:AN4721.2 Uniprot:Q5B409
Length = 1241
Score = 464 (168.4 bits), Expect = 1.1e-70, Sum P(2) = 1.1e-70
Identities = 124/443 (27%), Positives = 222/443 (50%)
Query: 557 DSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQL-QAHPLLGDPS--RVLLLA 613
D + LI + H+ E PG +L+F+TG ++I++ + L + LG PS +++L
Sbjct: 767 DYLDAALITVMQIHLT--EPPGDMLLFLTGQEEIDTACEILYERMKALG-PSVPELVILP 823
Query: 614 CHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNT 673
+ ++ S Q IFD G RK+V+ATN+AETSITI+++ +VID G K+ +YD
Sbjct: 824 VYSALPSEMQSRIFDPAPPGGRKVVIATNIAETSITIDNIYYVIDPGFVKQKAYDPKLGM 883
Query: 674 PCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDA-FADYQLPELLRTPLQSLCLQ 732
L+ + IS+ PG+C+ LY Y + +P++ R L L
Sbjct: 884 DSLVVTPISQAQAKQRAGRAGRTGPGKCFRLYTEAAYQSEMLPTTIPDIQRQNLSHTILM 943
Query: 733 IKSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKL 792
+K++ + + F + PP ++ A+E L + ALD+ LT LGR ++ P+EP L
Sbjct: 944 LKAMGINDLLHF--DFMDPPPTNTMLTALEELYALSALDDEGLLTRLGRKMADFPMEPAL 1001
Query: 793 GKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRA 852
K+LI C + ++++VA LS++ F P +K+ A+ KA+F + DHL L+
Sbjct: 1002 AKVLIASVDMGCSEEMLSIVAMLSIQSVFYRPKEKQQQADQKKAKFHD-PHGDHLTLLNV 1060
Query: 853 YDGWKDAERHQSGYE--YCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWS 910
Y+ WK +SG+ +C++NF+ A+ ++ +R+Q L G++ R
Sbjct: 1061 YNAWK-----RSGFSNAWCYENFIQARQIRRAQDVRQQLL------GIMQRYHHKIVSCG 1109
Query: 911 HDEHLIRAVICAGLFPGLCSVVNKEKSIALKTMEDGQ-VLLYSNSVNAGVPKIPYPWLVF 969
+ +R +C G F + K+ KT+ +G V ++ +S G P +++
Sbjct: 1110 RNTTKVRQALCTGFFR---NSARKDPQEGYKTLVEGTPVYMHPSSAMFGKPA---EHVIY 1163
Query: 970 NEKIKVNSVFLRDSTGVSDSVLL 992
+ + ++ +TG+ L+
Sbjct: 1164 HTLVLTTKEYMHCTTGIEPKWLV 1186
Score = 341 (125.1 bits), Expect = 1.1e-70, Sum P(2) = 1.1e-70
Identities = 77/191 (40%), Positives = 110/191 (57%)
Query: 294 RRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQ 353
R SLP YK R LL+A++ENQ+++V G+TG GKTTQ+ QY+ E+ A +G I CTQ
Sbjct: 574 RESLPVYKFRQQLLEAVAENQLLIVVGDTGSGKTTQVTQYLAEAGW-ANKGI---IGCTQ 629
Query: 354 PRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXX 413
PRR++AM+V++RVA E G KLG VGY +R E +T++ + T G+
Sbjct: 630 PRRVAAMSVAKRVAEEVGCKLGAEVGYTIRFEDCTSPETKIKYMTDGMLQREVLLDPDLK 689
Query: 414 GVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHI 473
+ +++DE HER + D L + SATL+A+ FS YF G P+ I
Sbjct: 690 KYSVIMLDEAHERTIATDVLFGLLKTTLKRRPDLRLIVTSATLDADKFSEYFYGCPIFSI 749
Query: 474 PGFTYPVRAYF 484
PG T+PV +
Sbjct: 750 PGRTFPVEIMY 760
Score = 44 (20.5 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 13/54 (24%), Positives = 23/54 (42%)
Query: 141 TMLLRNKDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNY 194
T L R D + +V+ A D F + + R + +++SK P +Y
Sbjct: 715 TTLKRRPDLRLIVTSATLDADKFSEYFYGCPIFSIPGRTFPVEIMYSKEPESDY 768
>UNIPROTKB|Q92620 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;IDA;TAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=TAS] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0031124 "mRNA 3'-end
processing" evidence=TAS] Reactome:REACT_71 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AC004682
GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH471166 Reactome:REACT_1788
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0006369 GO:GO:0031124 Reactome:REACT_78
HOVERGEN:HBG039428 KO:K12815 OMA:PSRSTWE CTD:9785 EMBL:AF038391
EMBL:D86977 EMBL:BC004235 EMBL:BC008340 IPI:IPI00294211
RefSeq:NP_054722.2 UniGene:Hs.151218 ProteinModelPortal:Q92620
SMR:Q92620 IntAct:Q92620 STRING:Q92620 PhosphoSite:Q92620
DMDM:85700389 PaxDb:Q92620 PeptideAtlas:Q92620 PRIDE:Q92620
DNASU:9785 Ensembl:ENST00000268482 GeneID:9785 KEGG:hsa:9785
UCSC:uc002fcb.3 GeneCards:GC16P072127 HGNC:HGNC:17211 HPA:HPA041347
MIM:605584 neXtProt:NX_Q92620 PharmGKB:PA27225 InParanoid:Q92620
OrthoDB:EOG4Z62MS PhylomeDB:Q92620 ChiTaRS:DHX38 GenomeRNAi:9785
NextBio:36846 ArrayExpress:Q92620 Bgee:Q92620 CleanEx:HS_DHX38
Genevestigator:Q92620 GermOnline:ENSG00000140829 Uniprot:Q92620
Length = 1227
Score = 423 (154.0 bits), Expect = 1.3e-70, Sum P(2) = 1.3e-70
Identities = 121/425 (28%), Positives = 205/425 (48%)
Query: 577 PGAVLVFMTGWDDINSLKDQLQAH-PLLGDPSRVLLLACHGSMASSEQRLIFDKPEDGVR 635
PG +L+FM G +DI DQ+ H L + + +L + + S Q IF K DGVR
Sbjct: 740 PGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQAKIFQKAPDGVR 799
Query: 636 KIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXXX 695
K ++ATN+AETS+T++ ++FVID G K ++ L IS+
Sbjct: 800 KCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGR 859
Query: 696 VQPGECYHLYPRYVY-DAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPEP 754
PG+C+ LY + Y + +PE+ RT L ++ L +KSL + + +F + PP
Sbjct: 860 TGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQF--HFMDPPPE 917
Query: 755 LSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAG 814
++ N++ L I+GALD LT GR + P++P L KMLI+ C ++ +V+
Sbjct: 918 DNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSM 977
Query: 815 LSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYEYCWKN-- 872
LSV F P +++ ++ + +F+ + SDHL + Y WK+ + Y W N
Sbjct: 978 LSVPAIFYRPKGREEESDQIREKFAVPE-SDHLTYLNVYLQWKN-----NNYSTIWCNDH 1031
Query: 873 FLSAQTLKAIDSLRKQFLFLLKDAGLVDR-NTENCNKWSHDEHLIRAVICAGLFPGLCSV 931
F+ A+ ++ + +R Q LKD + R + +C D ++R ICA F +
Sbjct: 1032 FIHAKAMRKVREVRAQ----LKDIMVQQRMSLASCGT---DWDIVRKCICAAYFHQAAKL 1084
Query: 932 VNKEKSIALKTMEDGQVL-LYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVSDSV 990
+ + ++T G L+ S G+ P ++V++E + +++ T V
Sbjct: 1085 KGIGEYVNIRT---GMPCHLHPTSSLFGMGYTP-DYIVYHELVMTTKEYMQCVTAVDGEW 1140
Query: 991 LLLFG 995
L G
Sbjct: 1141 LAELG 1145
Score = 383 (139.9 bits), Expect = 1.3e-70, Sum P(2) = 1.3e-70
Identities = 114/362 (31%), Positives = 176/362 (48%)
Query: 132 NIDEWRWKLTMLLRNKDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKV---VVFSK 188
N D RW+ +L + VV R + D DFE+ +A + +H+ + +VF+K
Sbjct: 371 NEDNERWETNRMLTSG----VVHRLEVDE-DFEEDNAAKVHLMVHNLVPPFLDGRIVFTK 425
Query: 189 APLP-----NYRSDLDE-KRPQREVILPFGLLREVDAHLKAYLSQKYINASMSSLSNVGS 242
P P + SDL R + + RE KA K+ + + L ++
Sbjct: 426 QPEPVIPVKDATSDLAIIARKGSQTVRKH---REQKERKKA--QHKHWELAGTKLGDIMG 480
Query: 243 TTNDEGLYEQQEQLVQNSVVRERILRQRSLQMHEKQQAWQESPEGQKMLEFRRSLPSYKE 302
+E E + + ++ V R ++ + M K +A E + + +LE R+ LP +
Sbjct: 481 VKKEE---EPDKAVTEDGKVDYRTEQKFADHMKRKSEASSEFAKKKSILEQRQYLPIFAV 537
Query: 303 RDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAV 362
+ LL I +N +V+V GETG GKTTQL QY+ E + G I CTQPRR++AM+V
Sbjct: 538 QQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHE-DGYTDYGM---IGCTQPRRVAAMSV 593
Query: 363 SERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDE 422
++RV+ E G LGE VGY +R E +T + + T GI + +I+DE
Sbjct: 594 AKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREADLDHYSAIIMDE 653
Query: 423 IHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRA 482
HER +N D L + SAT++AE F+++FG P+ HIPG T+PV
Sbjct: 654 AHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFAAFFGNVPIFHIPGRTFPVDI 713
Query: 483 YF 484
F
Sbjct: 714 LF 715
Score = 45 (20.9 bits), Expect = 4.7e-35, Sum P(2) = 4.7e-35
Identities = 12/53 (22%), Positives = 22/53 (41%)
Query: 142 MLLRNKDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNY 194
++ R D + +V+ A D F + R + ++FSK P +Y
Sbjct: 671 VVARRSDLKLIVTSATMDAEKFAAFFGNVPIFHIPGRTFPVDILFSKTPQEDY 723
>UNIPROTKB|F1S3A8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104877 EMBL:CU914723
Ensembl:ENSSSCT00000003045 OMA:IATIPEI Uniprot:F1S3A8
Length = 766
Score = 423 (154.0 bits), Expect = 4.4e-70, Sum P(2) = 4.4e-70
Identities = 121/425 (28%), Positives = 205/425 (48%)
Query: 577 PGAVLVFMTGWDDINSLKDQLQAH-PLLGDPSRVLLLACHGSMASSEQRLIFDKPEDGVR 635
PG +L+FM G +DI DQ+ H L + + +L + + S Q IF K DGVR
Sbjct: 279 PGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQAKIFQKAPDGVR 338
Query: 636 KIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXXX 695
K ++ATN+AETS+T++ ++FVID G K ++ L IS+
Sbjct: 339 KCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGR 398
Query: 696 VQPGECYHLYPRYVY-DAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPEP 754
PG+C+ LY + Y + +PE+ RT L ++ L +KSL + + +F + PP
Sbjct: 399 TGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQF--HFMDPPPE 456
Query: 755 LSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAG 814
++ N++ L I+GALD LT GR + P++P L KMLI+ C ++ +V+
Sbjct: 457 DNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSM 516
Query: 815 LSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYEYCWKN-- 872
LSV F P +++ ++ + +F+ + SDHL + Y WK+ + Y W N
Sbjct: 517 LSVPAIFYRPKGREEESDQIREKFAVPE-SDHLTYLNVYLQWKN-----NNYSTIWCNDH 570
Query: 873 FLSAQTLKAIDSLRKQFLFLLKDAGLVDR-NTENCNKWSHDEHLIRAVICAGLFPGLCSV 931
F+ A+ ++ + +R Q LKD + R + +C D ++R ICA F +
Sbjct: 571 FIHAKAMRKVREVRAQ----LKDIMVQQRMSLASCGT---DWDIVRKCICAAYFHQAAKL 623
Query: 932 VNKEKSIALKTMEDGQVL-LYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVSDSV 990
+ + ++T G L+ S G+ P ++V++E + +++ T V
Sbjct: 624 KGIGEYVNIRT---GMPCHLHPTSSLFGMGYTP-DYIVYHELVMTTKEYMQCVTAVDGEW 679
Query: 991 LLLFG 995
L G
Sbjct: 680 LAELG 684
Score = 368 (134.6 bits), Expect = 4.4e-70, Sum P(2) = 4.4e-70
Identities = 86/234 (36%), Positives = 125/234 (53%)
Query: 251 EQQEQLVQNSVVRERILRQRSLQMHEKQQAWQESPEGQKMLEFRRSLPSYKERDALLKAI 310
E + L ++ V R ++ + M +K +A E + + +LE R+ LP + + LL I
Sbjct: 25 EPDKALTEDGKVDYRTEQKFADHMKKKSEASSEFAKKKSILEQRQYLPIFAVQQELLTII 84
Query: 311 SENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAER 370
+N +V+V GETG GKTTQL QY+ E + G I CTQPRR++AM+V++RV+ E
Sbjct: 85 RDNSIVIVVGETGSGKTTQLTQYLHE-DGYTDYGM---IGCTQPRRVAAMSVAKRVSEEM 140
Query: 371 GEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNE 430
G LGE VGY +R E T + + T GI + +I+DE HER +N
Sbjct: 141 GGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLREADLDHYSAIIMDEAHERSLNT 200
Query: 431 DFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYF 484
D L + SAT++AE F+S+FG P+ HIPG T+PV F
Sbjct: 201 DVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPGRTFPVDILF 254
Score = 46 (21.3 bits), Expect = 3.3e-36, Sum P(2) = 3.3e-36
Identities = 12/53 (22%), Positives = 22/53 (41%)
Query: 142 MLLRNKDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNY 194
++ R D + +V+ A D F + R + ++FSK P +Y
Sbjct: 210 VVARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDY 262
Score = 39 (18.8 bits), Expect = 1.8e-35, Sum P(2) = 1.8e-35
Identities = 13/35 (37%), Positives = 22/35 (62%)
Query: 188 KAPLPNYRSDLDEKRPQREV---ILPFGLLREVDA 219
+A L +Y + + ++ +R + +L FGLLREV A
Sbjct: 179 EADLDHYSAIIMDEAHERSLNTDVL-FGLLREVVA 212
>POMBASE|SPAC10F6.02c [details] [associations]
symbol:prp22 "ATP-dependent RNA helicase Prp22"
species:4896 "Schizosaccharomyces pombe" [GO:0000390 "spliceosomal
complex disassembly" evidence=ISS] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPAC10F6.02c GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0005681 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GO:GO:0000390 KO:K12818
OMA:NAWCYEN PIR:T37496 RefSeq:NP_593253.1 ProteinModelPortal:O42643
IntAct:O42643 STRING:O42643 PRIDE:O42643
EnsemblFungi:SPAC10F6.02c.1 GeneID:2542978 KEGG:spo:SPAC10F6.02c
OrthoDB:EOG45TGW9 NextBio:20804011 Uniprot:O42643
Length = 1168
Score = 454 (164.9 bits), Expect = 1.1e-69, Sum P(2) = 1.1e-69
Identities = 118/422 (27%), Positives = 218/422 (51%)
Query: 575 ERPGAVLVFMTGWDDINSLKDQL-QAHPLLGDP-SRVLLLACHGSMASSEQRLIFDKPED 632
E PG +LVF+TG ++I++ + L + +LGD +++L + ++ S Q IF+
Sbjct: 717 EGPGDILVFLTGQEEIDTSCEILYERSKMLGDSIPELVILPVYSALPSEIQSRIFEPAPP 776
Query: 633 GVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXX 692
G RK+V+ATN+AETS+TI+ + +V+D G K++ +D L+ + IS+
Sbjct: 777 GGRKVVIATNIAETSLTIDGIYYVVDPGFVKQSCFDPKLGMDSLIVTPISQAQARQRSGR 836
Query: 693 XXXVQPGECYHLYPRYVY-DAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQP 751
PG+CY LY Y + +PE+ R L L +K++ + + F + P
Sbjct: 837 AGRTGPGKCYRLYTESAYRNEMLPSPIPEIQRQNLSHTILMLKAMGINDLLNF--DFMDP 894
Query: 752 PEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTV 811
P ++ A++ L + ALD+ LT LGR ++ P+EP+L K+LI C + ++++
Sbjct: 895 PPAQTMIAALQNLYALSALDDEGLLTPLGRKMADFPMEPQLSKVLITSVELGCSEEMLSI 954
Query: 812 VAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYEYCWK 871
+A LSV + + P +K+ A+ +AQF A SDHL L+ Y WK ++ +C++
Sbjct: 955 IAMLSVPNIWSRPREKQQEADRQRAQF-ANPESDHLTLLNVYTTWK---MNRCSDNWCYE 1010
Query: 872 NFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDEHLIRAVICAGLFPGLCSV 931
+++ A+ ++ + +RKQ L++ L+DR LI +C+G F +
Sbjct: 1011 HYIQARGMRRAEDVRKQ---LIR---LMDRYRHPVVSCGRKRELILRALCSGYFTNVAKR 1064
Query: 932 VNKEKSIALKTM-EDGQVLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVSDSV 990
+ E KT+ E+ V ++ + V G W++++E I+ + ++ + V+
Sbjct: 1065 DSHEG--CYKTIVENAPVYMHPSGVLFGKAA---EWVIYHELIQTSKEYMHTVSTVNPKW 1119
Query: 991 LL 992
L+
Sbjct: 1120 LV 1121
Score = 341 (125.1 bits), Expect = 1.1e-69, Sum P(2) = 1.1e-69
Identities = 96/277 (34%), Positives = 145/277 (52%)
Query: 214 LREVDAHLKAYLSQKYINASMSSLSNVGSTTNDEGLYEQQEQLVQNSVVRERILRQRSLQ 273
+R+ +A LK S++ + SLS + +N Q + Q+ VR+ RQ + +
Sbjct: 431 IRQKEAKLK---SEQEMEKQDLSLSWQDTMSNP-----QDRKFAQD--VRDSAARQLTSE 480
Query: 274 MHEKQQAWQES--PEGQK----MLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKT 327
+QA + + G++ M E R LP +K R L+A+S+NQ++V+ GETG GKT
Sbjct: 481 TPSWRQATRNANISYGKRTTLSMKEQREGLPVFKLRKQFLEAVSKNQILVLLGETGSGKT 540
Query: 328 TQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGM 387
TQ+ QY+ E E + I CTQPRR++AM+V++RVA E G ++GE VGY +R E
Sbjct: 541 TQITQYLAE---EGYTSDSKMIGCTQPRRVAAMSVAKRVAEEVGCRVGEEVGYTIRFEDK 597
Query: 388 KGRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXX 447
R T++ + T G+ + +I+DE HER + D L +
Sbjct: 598 TSRMTQIKYMTDGMLQRECLVDPLLSKYSVIILDEAHERTVATDVLFGLLKGTVLKRPDL 657
Query: 448 XXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYF 484
SATL+AE FSSYF P+ IPG +YPV +
Sbjct: 658 KLIVTSATLDAERFSSYFYKCPIFTIPGRSYPVEIMY 694
Score = 41 (19.5 bits), Expect = 2.4e-37, Sum P(3) = 2.4e-37
Identities = 11/52 (21%), Positives = 22/52 (42%)
Query: 143 LLRNKDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNY 194
+L+ D + +V+ A D F + R Y ++++K P +Y
Sbjct: 651 VLKRPDLKLIVTSATLDAERFSSYFYKCPIFTIPGRSYPVEIMYTKQPEADY 702
Score = 38 (18.4 bits), Expect = 2.4e-37, Sum P(3) = 2.4e-37
Identities = 9/34 (26%), Positives = 15/34 (44%)
Query: 105 AYQDESSDDSDREFGSTQQQMCGSTLDN-IDEWR 137
++QD S+ DR+F + L + WR
Sbjct: 452 SWQDTMSNPQDRKFAQDVRDSAARQLTSETPSWR 485
>POMBASE|SPBC19C2.01 [details] [associations]
symbol:cdc28 "ATP-dependent RNA helicase Cdc28"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005524 "ATP binding"
evidence=IC] [GO:0005681 "spliceosomal complex" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=ISO] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPBC19C2.01
GO:GO:0005524 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0005682 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0046540 GO:GO:0004004 EMBL:U48733 PIR:T46568 PIR:T50372
RefSeq:NP_595686.2 ProteinModelPortal:Q10752 STRING:Q10752
EnsemblFungi:SPBC19C2.01.1 GeneID:2540707 KEGG:spo:SPBC19C2.01
HOGENOM:HOG000175261 KO:K12813 OMA:RIDDHRD OrthoDB:EOG4SBJ63
NextBio:20801829 GO:GO:0045292 Uniprot:Q10752
Length = 1055
Score = 436 (158.5 bits), Expect = 1.1e-69, Sum P(2) = 1.1e-69
Identities = 129/423 (30%), Positives = 208/423 (49%)
Query: 578 GAVLVFMTGWDDINSLKDQLQAH-PLLGDP-SRVLLLACHGSMASSEQRLIFDKPEDGVR 635
G +LVF+TG D+I + + +Q +LG ++L + ++ S Q IFD G R
Sbjct: 628 GDILVFLTGQDEIELMSENMQELCRILGKRIPEIILCPIYANLPSELQAKIFDPTPPGAR 687
Query: 636 KIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXXX 695
K+VLATN+AETSITI+ V FVID G K+ Y+ L+ S+
Sbjct: 688 KVVLATNIAETSITIDGVNFVIDSGFVKQNMYNPRTGMESLVSVPCSRASADQRAGRAGR 747
Query: 696 VQPGECYHLYPRYVYDAFADYQL-PELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPEP 754
V PG+C+ LY R Y+ D PE+ RT L ++ L +KSL + ++ +F PPE
Sbjct: 748 VGPGKCFRLYTRRTYNNELDMVTSPEIQRTNLTNIVLLLKSLGINNLLDFDFMDAPPPET 807
Query: 755 LSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAG 814
L ++E L +GAL+ LT LGR ++ P +P L K LI + + C++ V+++V+
Sbjct: 808 LM--RSLELLYALGALNNRGELTKLGRQMAEFPTDPMLSKSLIASSKYGCVEEVLSIVSM 865
Query: 815 LSVRDP-FLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYEYCWKNF 873
L F P DK A+ A+A F+ + DHL L+ ++ W D + Y + +NF
Sbjct: 866 LGEASSLFYRPKDKIMEADKARANFT-QPGGDHLTLLHIWNEWVDTD---FSYNWARENF 921
Query: 874 LSAQTLKAIDSLRKQFLFLLK--DAGLVDRNTENCNKWSHDEHLIRAVICAGLFPGLCSV 931
L ++L +R Q L + + LV ++E+ + I+ I AG F +
Sbjct: 922 LQYKSLCRARDVRDQLANLCERVEIELVTNSSESLDP-------IKKAITAGYFSNAARL 974
Query: 932 VNKEKSIALKTMEDGQ-VLLY-SNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVSDS 989
S +T++ Q V ++ S+SV PK+ +++ E + + R T +
Sbjct: 975 DRSGDSY--RTVKSNQTVYIHPSSSVAEKKPKV----IIYFELVLTTKEYCRQITEIQPE 1028
Query: 990 VLL 992
LL
Sbjct: 1029 WLL 1031
Score = 358 (131.1 bits), Expect = 1.1e-69, Sum P(2) = 1.1e-69
Identities = 78/198 (39%), Positives = 112/198 (56%)
Query: 288 QKMLEF-RRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAA 346
+K LE R+SLP Y+ +D LLKAI+E QV+++ ETG GKTTQLPQ++ E+
Sbjct: 408 EKSLESSRKSLPVYQYKDDLLKAINEYQVLLIVAETGSGKTTQLPQFLHEAGYTKGNKKI 467
Query: 347 CSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXX 406
C CTQPRR++AM+V+ RVA E +LG+ VGY +R E T + + T G+
Sbjct: 468 C---CTQPRRVAAMSVAARVAKEMDVRLGQEVGYSIRFENATSEKTVIKYLTDGMLLREF 524
Query: 407 XXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFG 466
+ +I+DE HER ++ D L + SAT++AE FS+YF
Sbjct: 525 LTEPDLASYSVIIIDEAHERTLHTDILFGLVKDIARFRPDLKVLISSATIDAEKFSAYFD 584
Query: 467 GAPMLHIPGFTYPVRAYF 484
AP+ ++PG YPV Y+
Sbjct: 585 EAPVFYVPGRRYPVDIYY 602
>UNIPROTKB|F1MVJ1 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0071013 "catalytic
step 2 spliceosome" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
IPI:IPI00690755 EMBL:DAAA02046748 EMBL:DAAA02046749
Ensembl:ENSBTAT00000045480 ArrayExpress:F1MVJ1 Uniprot:F1MVJ1
Length = 1226
Score = 403 (146.9 bits), Expect = 1.9e-69, Sum P(2) = 1.9e-69
Identities = 121/426 (28%), Positives = 205/426 (48%)
Query: 577 PGAVLVFMTGWDDINSLKDQLQAH-PLLGDPSRVLLLACHGSMASSEQRLIFDKPEDGVR 635
PG +L+FM G +DI DQ+ H L + + +L + + S Q IF K DGVR
Sbjct: 740 PGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQAKIFQKAPDGVR 799
Query: 636 KIVLATNMAETSITINDVVFVIDCGKAK-ETSYDALNNTPCLLPSWISKXXXXXXXXXXX 694
K ++ATN+AETS+T++ ++FVID G K + S +L + + I K
Sbjct: 800 KCIVATNIAETSLTVDGIMFVIDSGYCKLKVSSPSLGGSDLKIME-IQKIQKNINTGCSG 858
Query: 695 XVQPGECYHLYPRYVY-DAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPE 753
P C LY + Y + +PE+ RT L ++ L +KSL + + +F + PP
Sbjct: 859 CTSP-RCCRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQF--HFMDPPP 915
Query: 754 PLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVA 813
++ N++ L I+GALD LT GR + P++P L KMLI+ C ++ +V+
Sbjct: 916 EDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVS 975
Query: 814 GLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYEYCWKN- 872
LSV F P +++ ++ + +F+ + SDHL+ + Y WK+ + Y W N
Sbjct: 976 MLSVPAIFYRPKGREEESDQIREKFAVPE-SDHLSYLNVYLQWKN-----NNYSTIWCND 1029
Query: 873 -FLSAQTLKAIDSLRKQFLFLLKDAGLVDR-NTENCNKWSHDEHLIRAVICAGLFPGLCS 930
F+ A+ ++ + +R Q LKD + R + +C D ++R ICA F
Sbjct: 1030 HFIHAKAMRKVREVRAQ----LKDIMVQQRMSLASCGT---DWDIVRKCICAAYFHQAAK 1082
Query: 931 VVNKEKSIALKTMEDGQVL-LYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVSDS 989
+ + + ++T G L+ S G+ P ++V++E + +++ T V
Sbjct: 1083 LKGIGEYVNIRT---GMPCHLHPTSSLFGMGYTP-DYIVYHELVMTTKEYMQCVTAVDGE 1138
Query: 990 VLLLFG 995
L G
Sbjct: 1139 WLAELG 1144
Score = 393 (143.4 bits), Expect = 1.9e-69, Sum P(2) = 1.9e-69
Identities = 117/362 (32%), Positives = 176/362 (48%)
Query: 132 NIDEWRWKLTMLLRNKDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKV---VVFSK 188
N D RW+ +L + VV R + D DFE+ SA + +H+ + +VF+K
Sbjct: 371 NEDNERWETNRMLTSG----VVHRLEVDE-DFEEDSAAKVHLMVHNLVPPFLDGRIVFTK 425
Query: 189 APLP-----NYRSDLDE-KRPQREVILPFGLLREVDAHLKAYLSQKYINASMSSLSNVGS 242
P P + SDL R + + RE KA K+ + + L ++
Sbjct: 426 QPEPVIPVKDATSDLAIIARKGSQTVRKH---REQKERKKA--QHKHWELAGTKLGDIMG 480
Query: 243 TTNDEGLYEQQEQLVQNSVVRERILRQRSLQMHEKQQAWQESPEGQKMLEFRRSLPSYKE 302
+E E + L ++ V R ++ + M +K +A E + + +LE R+ LP +
Sbjct: 481 VKKEE---EPDKSLTEDGKVDYRTEQKFADHMKKKSEASSEFAKKKSILEQRQYLPIFAV 537
Query: 303 RDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAV 362
+ LL I +N +V+V GETG GKTTQL QY+ E + G I CTQPRR++AM+V
Sbjct: 538 QQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHE-DGYTDYGM---IGCTQPRRVAAMSV 593
Query: 363 SERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDE 422
++RV+ E G LGE VGY +R E T + + T GI + +I+DE
Sbjct: 594 AKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLREADLDHYSAIIMDE 653
Query: 423 IHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRA 482
HER +N D L + SAT++AE F+S+FG P+ HIPG T+PV
Sbjct: 654 AHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPGRTFPVDI 713
Query: 483 YF 484
F
Sbjct: 714 LF 715
Score = 46 (21.3 bits), Expect = 5.7e-33, Sum P(2) = 5.7e-33
Identities = 12/53 (22%), Positives = 22/53 (41%)
Query: 142 MLLRNKDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNY 194
++ R D + +V+ A D F + R + ++FSK P +Y
Sbjct: 671 VVARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDY 723
Score = 41 (19.5 bits), Expect = 1.9e-32, Sum P(2) = 1.9e-32
Identities = 31/122 (25%), Positives = 43/122 (35%)
Query: 187 SKAPLPNYRSDLDEKRPQ-REVILPFGLLREVDAHLKAYLSQKYINASMSSLSNVGST-- 243
S +P P+YR RP R+ D L S KY N ++GST
Sbjct: 232 SPSPTPSYRDSERSHRPSSRDRDRSVRSRYSDDTPLPTP-SYKY-NEWADDRRHLGSTPR 289
Query: 244 -TNDEGLYEQQEQLVQNSVVRERILRQRSLQMHEKQQAWQESPEGQKMLEFRRSLPSYKE 302
+ G E E+ + ER +Q + + W EG EF L +Y
Sbjct: 290 LSRGRGRREDGEEGISFDTEEER--QQWEDDQRQADRDWYMMDEGYD--EFHNPL-AYSS 344
Query: 303 RD 304
D
Sbjct: 345 DD 346
>UNIPROTKB|Q608K8 [details] [associations]
symbol:MCA1482 "ATP-dependent helicase HrpA" species:243233
"Methylococcus capsulatus str. Bath" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR010222
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:AE017282 GenomeReviews:AE017282_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_113939.1 ProteinModelPortal:Q608K8 GeneID:3104911
KEGG:mca:MCA1482 PATRIC:22606802 Uniprot:Q608K8
Length = 1294
Score = 461 (167.3 bits), Expect = 3.9e-69, Sum P(2) = 3.9e-69
Identities = 119/329 (36%), Positives = 180/329 (54%)
Query: 574 KERPGAVLVFMTGWDDINSLKDQLQAHPLLGDPSRVLLLACHGSMASSEQRLIFDKPEDG 633
+E G +L+F++G +I + L+ H P+ +L + + SEQ IF KP G
Sbjct: 287 RENTGDILIFLSGEREIRDTAESLRKH----HPADCEVLPLYSRLTVSEQEKIF-KPH-G 340
Query: 634 VRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXX 693
R+IVLATN+AETS+T+ + VID G A+ + Y + L IS+
Sbjct: 341 RRRIVLATNVAETSLTVPGIRGVIDAGYARISRYSHRSKLQRLPIEKISRASANQRAGRC 400
Query: 694 XXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPE 753
V PG C LY + ++ PE+LRT L ++ LQ+K+L LG I F ++PP+
Sbjct: 401 GRVGPGVCIRLYSEQDFLNRPEFTDPEILRTNLAAVILQMKALNLGDIRVF--PFVEPPD 458
Query: 754 PLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVA 813
V++ + LQ I ALD LT LGR L+ LPV+P+LG++L+ GA NCL V +VA
Sbjct: 459 ERLVRDGLRTLQEINALDAQGRLTELGRRLARLPVDPRLGRILLAGAEENCLSEVCIIVA 518
Query: 814 GLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGY---EYCW 870
LSV DP P DK A+ A+F D SD +A++ ++ +++ +H SG +YC
Sbjct: 519 ALSVPDPRERPADKAQAADQKHARFRHPD-SDFMAILALWNDYEEQRQHLSGSKLRQYCR 577
Query: 871 KNFLSAQTLKAIDSLRKQFLFLLK-DAGL 898
NFLSA ++ + +Q L ++K + GL
Sbjct: 578 DNFLSALRMREWRDIHQQILEVVKGELGL 606
Score = 330 (121.2 bits), Expect = 3.9e-69, Sum P(2) = 3.9e-69
Identities = 80/190 (42%), Positives = 102/190 (53%)
Query: 291 LEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSII 350
LE+ LP + R + +AI +NQVV+V GETG GKTTQLP+ LE A RG I
Sbjct: 68 LEYPEELPVSERRGEIAEAIRQNQVVIVCGETGSGKTTQLPKICLE----AGRGIQGYIG 123
Query: 351 CTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXX 410
TQPRRI+A +V+ R+A E LGE+VGYKVR D+ + T GI
Sbjct: 124 HTQPRRIAARSVAARIADELKRPLGETVGYKVRFHDQTRPDSLIKLMTDGILLAETQTDR 183
Query: 411 XXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPM 470
+IVDE HER +N DFLL SAT++ E FS +F AP+
Sbjct: 184 FLDQYDTLIVDEAHERSLNIDFLLGYLKWLLPRRHDLKLVITSATIDPERFSRHFDNAPI 243
Query: 471 LHIPGFTYPV 480
+ +PG TYPV
Sbjct: 244 VRVPGRTYPV 253
Score = 46 (21.3 bits), Expect = 6.1e-25, Sum P(2) = 6.1e-25
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 818 RDPFLMPFDKKDLAESAKAQFSARDYSDHLAL 849
R+P L+ ++D+ + +A D+ D LAL
Sbjct: 818 REPRLLMLSREDITLDSGGGGTAGDFPDELAL 849
>UNIPROTKB|G4N1N4 [details] [associations]
symbol:MGG_07501 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CM001233 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12813 RefSeq:XP_003711413.1
EnsemblFungi:MGG_07501T0 GeneID:2683421 KEGG:mgr:MGG_07501
Uniprot:G4N1N4
Length = 1016
Score = 428 (155.7 bits), Expect = 5.7e-69, Sum P(3) = 5.7e-69
Identities = 117/411 (28%), Positives = 207/411 (50%)
Query: 578 GAVLVFMTGWDDINSLKDQL-QAHPLLGDPSRVLLLA-CHGSMASSEQRLIFDKPEDGVR 635
G +L+F+TG D+I + + Q+ + LG + L++ + ++ S Q IF+ + R
Sbjct: 583 GDILIFLTGQDEIEAAEMQITETARKLGSRVKELVICPIYANLPSELQSKIFEPTPENAR 642
Query: 636 KIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXXX 695
K+VLATN+AETS+TI+ +V+VID G KE Y+ L+ S+
Sbjct: 643 KVVLATNIAETSLTIDGIVYVIDPGYVKENVYNPATGMSNLVVVPCSRASANQRSGRAGR 702
Query: 696 VQPGECYHLYPRYVY-DAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPEP 754
V PG+C+ LY +Y Y + + PE+ RT L + LQ+KSL + + +F + PP
Sbjct: 703 VGPGKCFRLYTKYAYMNEMEESTTPEIQRTNLNGVVLQLKSLGINELLDF--EFMDPPPT 760
Query: 755 LSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAG 814
++ A+ L + L+ LT LGR ++ P +P L K ++ C++ V+++VA
Sbjct: 761 EALIGALNQLFALQGLNHKGELTKLGRQMAEFPTDPMLAKAVLAADKEGCVEEVLSIVAM 820
Query: 815 LSVRDP-FLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYEYCW--K 871
LS F P DK+ A++A+ +F+ ++ DH+ L+ ++ W D++ Y W +
Sbjct: 821 LSEASALFFRPKDKQVHADAARGRFTVKEGGDHVTLLNIWNQWLDSD-----YSPIWSKE 875
Query: 872 NFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDEHLIRAVICAGLFPGLCSV 931
NFL ++L +R+Q L K V+ C S+ + RA I AG FP +
Sbjct: 876 NFLQQRSLTRARDVREQ---LSKLCERVEVTLSTCGGISNMPPIKRA-ITAGFFPNAARM 931
Query: 932 VNKEKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLV-FNEKIKVNSVFLR 981
S +T+++ + Y + + + + P P +V + E ++ ++R
Sbjct: 932 QRSGDSY--RTVKNNTTV-YIHPSSVMMQEDPPPRMVIYYELVQTTKEYMR 979
Score = 359 (131.4 bits), Expect = 5.7e-69, Sum P(3) = 5.7e-69
Identities = 79/195 (40%), Positives = 108/195 (55%)
Query: 290 MLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSI 349
M E R+SLP Y RD L A+ + Q++V+ GETG GKTTQLPQY+ E+ +
Sbjct: 366 MQETRKSLPIYVYRDEFLAALEQYQILVIVGETGSGKTTQLPQYLHEA---GYTKDGMRV 422
Query: 350 ICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXX 409
CTQPRR++AM+V+ RVA E G K+G VGY +R E T L + T G+
Sbjct: 423 GCTQPRRVAAMSVAARVADEMGVKVGNEVGYSIRFEDNTSDKTILKYMTDGMLLREFMTE 482
Query: 410 XXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAP 469
+ +++DE HER ++ D LL + SAT+NAE F+SYF AP
Sbjct: 483 PDLSSYSALMIDEAHERTVHTDILLALVKDLARERKDLKLLISSATMNAEKFASYFDDAP 542
Query: 470 MLHIPGFTYPVRAYF 484
+ +IPG YPV Y+
Sbjct: 543 IFNIPGRRYPVDIYY 557
Score = 47 (21.6 bits), Expect = 5.7e-69, Sum P(3) = 5.7e-69
Identities = 17/66 (25%), Positives = 30/66 (45%)
Query: 139 KLTMLLRNKDE--QEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNYRS 196
K L DE + V ++ KDRRD ++ S+ + H R ++ ++ +YRS
Sbjct: 6 KYAFLPMQDDEVGPQKVKKSSKDRRDKKKESSSSRHSRSHRRSRSRSPA-RESSSKHYRS 64
Query: 197 DLDEKR 202
+ R
Sbjct: 65 RAKDSR 70
Score = 46 (21.3 bits), Expect = 7.3e-69, Sum P(3) = 7.3e-69
Identities = 19/78 (24%), Positives = 30/78 (38%)
Query: 91 YPLLEQQTSNYGRYAYQDESSDDSDREFGSTQQQMCGSTLDNIDEWRWKLTMLLRNKDEQ 150
Y L Q G + S D D++ S+ + S R + R +
Sbjct: 7 YAFLPMQDDEVGPQKVKKSSKDRRDKKKESSSSRHSRS------HRRSRSRSPARESSSK 60
Query: 151 EVVSRAKKDRRDFEQLSA 168
SRAK RRD+++ S+
Sbjct: 61 HYRSRAKDSRRDYDRHSS 78
Score = 45 (20.9 bits), Expect = 3.5e-36, Sum P(3) = 3.5e-36
Identities = 20/66 (30%), Positives = 30/66 (45%)
Query: 499 YNQIDDYGQEK------SWKMQKQALALRKRKSSIASAVEDALEAADFREYSVQTQQSLS 552
Y + D+YGQEK W+ ++ A K K+ I A D EA +Y + Q +
Sbjct: 280 YVEKDEYGQEKFVTEHEEWEREQAA----KAKAQIKVAERD--EAG--YDYVMDEDQYIQ 331
Query: 553 CWNPDS 558
W D+
Sbjct: 332 -WTRDT 336
Score = 44 (20.5 bits), Expect = 4.5e-36, Sum P(3) = 4.5e-36
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 500 NQIDDYGQEKSWKMQKQALALRKRKSSIASAVEDALEA-ADFREYSVQ 546
N++ + +S K K+ LA R+S +A + EA AD RE S Q
Sbjct: 146 NRLKERDDGRSKKGGKEDLATSLRRS-LADDAKGRSEAVADLRERSRQ 192
Score = 44 (20.5 bits), Expect = 7.7e-36, Sum P(2) = 7.7e-36
Identities = 13/50 (26%), Positives = 22/50 (44%)
Query: 147 KDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNYRS 196
KD + ++S A + F A + R+Y + ++ AP NY S
Sbjct: 518 KDLKLLISSATMNAEKFASYFDDAPIFNIPGRRYPVDIYYTPAPEANYLS 567
>WB|WBGene00022056 [details] [associations]
symbol:Y67D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO081642 RefSeq:NP_497420.1
ProteinModelPortal:Q9BKQ8 SMR:Q9BKQ8 MINT:MINT-1068531
STRING:Q9BKQ8 PaxDb:Q9BKQ8 EnsemblMetazoa:Y67D2.6 GeneID:175308
KEGG:cel:CELE_Y67D2.6 UCSC:Y67D2.6 CTD:175308 WormBase:Y67D2.6
InParanoid:Q9BKQ8 KO:K13117 OMA:NIFVVPP NextBio:887600
Uniprot:Q9BKQ8
Length = 732
Score = 478 (173.3 bits), Expect = 1.3e-67, Sum P(2) = 1.3e-67
Identities = 124/418 (29%), Positives = 217/418 (51%)
Query: 570 HIVKKERPGAVLVFMTGWDDINSLKDQL-QAHPLLGDPSRVLLLACHGSMASSEQRLIFD 628
+I K E PG +LVF+TG D++ + ++L + L + R+ ++ C+G++ + EQ FD
Sbjct: 289 NIHKHENPGDILVFLTGQDEVEDVCEKLRELAGNLKNCDRLWVVPCYGALPAREQMKAFD 348
Query: 629 KPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXX 688
G RK+V+ATN+AE SITI + +VID G K + A N L+ +SK
Sbjct: 349 STPHGTRKVVVATNIAEASITIPGICYVIDTGYVKLRAQHAANGVETLMRVTVSKASAEQ 408
Query: 689 XXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRA 748
++PG+CY LYP ++ FA+ +PE+ R + S LQ+K+L + ++ F
Sbjct: 409 RAGRAGRIRPGKCYRLYPESEFERFAEGTVPEIQRCQMASTILQLKALGVQNVHRF--HY 466
Query: 749 LQPPEPLSVKNAIEYLQIIGALDENENLTV-LGRNLSMLPVEPKLGKMLILGAIFNCLDP 807
L PP ++ N +E L +GA+DE LT LG ++ P+ P K L+ A F C
Sbjct: 467 LSPPPSWAMINGLELLYALGAIDETSQLTSPLGLQMAEFPLPPMHSKCLLKSAEFGCSTE 526
Query: 808 VMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYE 867
++T+VA + ++D F+ P+ ++ A+ + +F+ + DH+ ++ + K E +S +
Sbjct: 527 MVTIVAMMQIQDVFITPYRQRHQADVIRKKFAVEE-GDHMTMLNVFT--KFVENGRSK-K 582
Query: 868 YCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDEHLIRAVICAGLFPG 927
+C +F++ + L D++R Q + LLK + ++ S + IR + G F
Sbjct: 583 WCSDHFVNYRGLMRADNVRSQLVRLLKRFEIEKVSSRGLINCSEN---IRQCLVTGFFSQ 639
Query: 928 LCSVVNKEKSIALKTMEDGQVLLYSNSVNAGVPKIPYP-WLVFNEKIKVNSVFLRDST 984
K + +K E +Y S + + K YP W++F E ++ +S+ RD T
Sbjct: 640 AAQYHYTGKYMTVK--ESFPFNMYKGS--SIMFKKDYPKWVIFTEVMQ-DSI--RDVT 690
Score = 281 (104.0 bits), Expect = 1.3e-67, Sum P(2) = 1.3e-67
Identities = 65/191 (34%), Positives = 101/191 (52%)
Query: 276 EKQQAWQESPEGQKMLEFRR-SLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYI 334
E+Q +P ++ +R LP +K R +L + +++ GETGCGK+TQ+PQ++
Sbjct: 55 EEQLKVHNNPYASLNIQQQRIRLPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFL 114
Query: 335 LESETEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRL 394
LE+ AA G I+ TQPRR++ + ++ RVA E+ LG VGY VR + + +DT++
Sbjct: 115 LEAGW-AADGR--QIVITQPRRVAVVTLATRVAEEKDCILGHDVGYTVRFDDVSDKDTKV 171
Query: 395 MFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSA 454
F T G+ + +++DE HER N D LL + SA
Sbjct: 172 KFMTDGLLLREILADPLLSKYSIIMIDEAHERSCNTDILLGLLRKIIQIRNDLRIIVSSA 231
Query: 455 TLNAELFSSYF 465
TL+AELF +F
Sbjct: 232 TLDAELFKDFF 242
>ZFIN|ZDB-GENE-040426-1144 [details] [associations]
symbol:dhx38 "DEAH (Asp-Glu-Ala-His) box
polypeptide 38" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-040426-1144 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 KO:K12815 CTD:9785 OrthoDB:EOG4Z62MS
EMBL:BC063744 IPI:IPI00493120 RefSeq:NP_957170.1 UniGene:Dr.38854
ProteinModelPortal:Q6P404 STRING:Q6P404 PRIDE:Q6P404 GeneID:393850
KEGG:dre:393850 NextBio:20814835 ArrayExpress:Q6P404 Bgee:Q6P404
Uniprot:Q6P404
Length = 1258
Score = 405 (147.6 bits), Expect = 2.2e-67, Sum P(3) = 2.2e-67
Identities = 118/424 (27%), Positives = 202/424 (47%)
Query: 578 GAVLVFMTGWDDINSLKDQLQAHPL-LGDPSRVLLLACHGSMASSEQRLIFDKPEDGVRK 636
G +L+FM G +DI DQ+ L + + +L + + S Q IF K DGVRK
Sbjct: 772 GDILIFMPGQEDIEVTSDQIVERLADLENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRK 831
Query: 637 IVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXXXV 696
++ATN+AETS+T++ ++FV+D G K ++ L IS+
Sbjct: 832 CIVATNIAETSLTVDGIMFVVDSGYCKLKVFNPRIGMDALQVYPISQANANQRAGRAGRT 891
Query: 697 QPGECYHLYPRYVY-DAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPEPL 755
PG+CY LY + + + +PE+ RT L ++ L +KSL + + L + PP
Sbjct: 892 GPGQCYRLYTQSAFKNEMLTTTIPEIQRTNLANVVLLLKSLGVQDL--LLFHFMDPPPED 949
Query: 756 SVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGL 815
++ N++ L I+GALD LT GR + P++P L KMLI+ +C ++ +V+ L
Sbjct: 950 NMLNSMYQLWILGALDNTGALTPTGRLMVEFPLDPALSKMLIVSCDMSCSADILIIVSML 1009
Query: 816 SVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYEYCWKN--F 873
SV F P +++ ++ + +FS + SDHL + Y WK+ + Y W N F
Sbjct: 1010 SVPSIFYRPKGREEESDQVREKFSVPE-SDHLTYLNVYLQWKN-----NNYSSIWCNDHF 1063
Query: 874 LSAQTLKAIDSLRKQFLFLLKDAGLVDR-NTENCNKWSHDEHLIRAVICAGLFPGLCSVV 932
+ + ++ + +R Q LKD + + N +C D +IR ICA F +
Sbjct: 1064 IHTKAMRKVREVRAQ----LKDIMVQQKMNLISCGS---DWDVIRKCICAAYFHQAAKLK 1116
Query: 933 NKEKSIALKTMEDGQVL-LYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVSDSVL 991
+ + ++T G L+ S G+ P +++++E + +++ T V L
Sbjct: 1117 GIGEYVNVRT---GMPCHLHPTSALFGMGYTP-DYIIYHELVMTTKEYMQCVTAVDGEWL 1172
Query: 992 LLFG 995
G
Sbjct: 1173 AELG 1176
Score = 378 (138.1 bits), Expect = 2.2e-67, Sum P(3) = 2.2e-67
Identities = 110/360 (30%), Positives = 177/360 (49%)
Query: 132 NIDEWRWKLTMLLRNKDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKV---VVFSK 188
N D RW+ +L + VV R + D DFE+ +A + +H+ + +VF+K
Sbjct: 400 NEDNERWETNRMLTSG----VVQRLEVDE-DFEEDNAARVHLLVHNLVPPFLDGRIVFTK 454
Query: 189 APLPNYRSDLDEKRPQREVILPFG--LLREVDAHLKAYLSQ-KYINASMSSLSNV-GSTT 244
P P + + +I G L+R + +Q K+ + + L ++ G
Sbjct: 455 QPEPVI--PVKDATSDMAIISRKGSQLVRRHREQKERKKAQHKHWELAGTKLGDIMGIQK 512
Query: 245 NDEGLYEQQEQLVQNSVVRERILRQRSLQMHEKQQAWQESPEGQKMLEFRRSLPSYKERD 304
++G + + ++ V R ++ + M EK +A + + + +LE R+ LP + R
Sbjct: 513 KEDG--GDSKAVGEDGKVDYRAEQKFADHMKEKSEASSDFAKKKTLLEQRQYLPIFAVRQ 570
Query: 305 ALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAVSE 364
LL I +N +V+V GETG GKTTQL QY+ E + + G + CTQPRR++AM+V++
Sbjct: 571 QLLNIIRDNNIVIVVGETGSGKTTQLTQYLHE-DGYTSYGM---VGCTQPRRVAAMSVAK 626
Query: 365 RVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIH 424
RV+ E LGE VGY +R E T + + T GI + VI+DE H
Sbjct: 627 RVSEEMNSNLGEEVGYAIRFEDCTSEKTMIKYMTDGILLRESLRESDLDHYSAVIMDEAH 686
Query: 425 ERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYF 484
ER +N D L + SAT++++ F+S+FG P+ HIPG T+PV F
Sbjct: 687 ERSLNTDVLFGLLREVVSRRSDLKLIVTSATMDSDKFASFFGNVPIFHIPGRTFPVDILF 746
Score = 43 (20.2 bits), Expect = 2.2e-67, Sum P(3) = 2.2e-67
Identities = 23/82 (28%), Positives = 39/82 (47%)
Query: 87 KAVSYPLLEQQTSNYGRYAYQDESSDDSDREFGSTQQQ--MCGS-TLDN---IDEWRWKL 140
K SY E+ S+ G DE+ +D + G +++ + GS T N + E +K
Sbjct: 73 KVSSYKDWEEGKSDSGS---DDENQEDGESRNGKKERKYRVTGSETPSNPGGVSE-EFKR 128
Query: 141 TMLLRNKDEQE--VVSRAKKDR 160
R KD +E V + +K+D+
Sbjct: 129 KHQQREKDRREHGVYASSKEDK 150
Score = 43 (20.2 bits), Expect = 7.9e-33, Sum P(2) = 7.9e-33
Identities = 12/50 (24%), Positives = 20/50 (40%)
Query: 145 RNKDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNY 194
R D + +V+ A D F + R + ++FSK P +Y
Sbjct: 705 RRSDLKLIVTSATMDSDKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDY 754
Score = 39 (18.8 bits), Expect = 5.1e-32, Sum P(3) = 5.1e-32
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 187 SKAPLPNYRSDLDEKRPQREV 207
S +P P++R + +R QR V
Sbjct: 255 SPSPAPSHRENDRSERSQRSV 275
>FB|FBgn0052533 [details] [associations]
symbol:CG32533 species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:AE014298 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
OMA:DSDQVFH GeneTree:ENSGT00700000104421 EMBL:AY058623
RefSeq:NP_728244.1 UniGene:Dm.4145 SMR:Q9VWI5
EnsemblMetazoa:FBtr0074786 GeneID:32933 KEGG:dme:Dmel_CG32533
UCSC:CG32533-RA FlyBase:FBgn0052533 InParanoid:Q9VWI5
OrthoDB:EOG4V9S5G GenomeRNAi:32933 NextBio:781096 Uniprot:Q9VWI5
Length = 1139
Score = 452 (164.2 bits), Expect = 3.4e-67, Sum P(2) = 3.4e-67
Identities = 107/328 (32%), Positives = 179/328 (54%)
Query: 575 ERPGAVLVFMTGWDDINSLKDQLQAHPLLGDPSRVLLLACHGSMASSEQRLIFDKPEDGV 634
ER G VL+F++G ++I S+ + + H + + L+L H A ++Q +FD +G+
Sbjct: 371 ER-GDVLIFVSGVNEIESVVEAV--HEYATEQTHWLVLPLHSGQAIADQSKVFDYAPEGM 427
Query: 635 RKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXX 694
RK +++TN+AETS+T++ V FV+D GK KE ++DA L W+SK
Sbjct: 428 RKCIVSTNIAETSLTVDGVRFVVDSGKVKEMNFDATCKGQRLKEFWVSKSSADQRKGRAG 487
Query: 695 XVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPEP 754
PG C+ LY Y+AF Y PE+ R PL ++ LQ+ S+ L + F ++ PE
Sbjct: 488 RTGPGVCFRLYTAEQYNAFEAYPTPEIYRVPLDTMLLQMVSMGLPDVRAF--PFIEAPET 545
Query: 755 LSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAG 814
++ I L+ AL E +T LGR+L+ LPVE +GKML++G++F ++ ++T+ A
Sbjct: 546 ERIEQTILALKQHCALSVEEKITPLGRSLANLPVELSIGKMLLMGSVFPEVEQLLTLAAM 605
Query: 815 LSVRDPFL--MPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGY-EYCWK 871
LSV++P D++ + E + D+ D LVR Y+ W + + G ++C +
Sbjct: 606 LSVQNPLTNRAHTDQRCVRERESLE---SDHGDLFTLVRLYNVWVQLKMRRDGTRQWCRR 662
Query: 872 NFLSAQTLKAIDSLRKQFLFLLKDAGLV 899
+ Q + LR+QF +L+ G+V
Sbjct: 663 LGIEEQRFYEVTKLRQQFQRILESCGMV 690
Score = 319 (117.4 bits), Expect = 3.4e-67, Sum P(2) = 3.4e-67
Identities = 81/242 (33%), Positives = 129/242 (53%)
Query: 246 DEGLYEQQEQLVQNSVVRERILRQRSLQMHEKQQAWQESPEGQKMLEFRRSLPSYKERDA 305
DE L E ++Q+ S R +L + EK Q + K+ + +R+LP + R
Sbjct: 103 DELLQEARDQM--QSQFRHILLVYLDFRQTEKFQRIR------KLRQTQRNLPIARFRKD 154
Query: 306 LLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAVSER 365
L +A+ ++VV+V+G+TGCGK+TQ+PQY+ + SI CTQPRR++ +++ +R
Sbjct: 155 LREALDTSRVVIVAGDTGCGKSTQVPQYLYDFGYR-------SIACTQPRRLACVSLCKR 207
Query: 366 VAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHE 425
VA E + G V +++R E + + T ++F T G+ +I+DEIHE
Sbjct: 208 VAHELLDDYGSRVAFQIRFERSRTKLTNILFITEGLLLRQLAVAANLDQYDALILDEIHE 267
Query: 426 RGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFG--GAPMLHIPGFTYPVRAY 483
R + DFLL V MSAT+N ELF YFG GA ++ +PG +P++
Sbjct: 268 RNLFGDFLLGVTKCLLRARPQLKLILMSATINVELFHGYFGEEGARLVQVPGRLFPIKLR 327
Query: 484 FL 485
+L
Sbjct: 328 YL 329
>SGD|S000001794 [details] [associations]
symbol:PRP16 "DEAH-box RNA helicase involved in second
catalytic step of splicing" species:4932 "Saccharomyces cerevisiae"
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000350 "generation of catalytic
spliceosome for second transesterification step" evidence=IMP]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0071007 "U2-type catalytic step 2 spliceosome" evidence=IDA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001794 GO:GO:0005524 GO:GO:0003676
EMBL:BK006944 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0071007 EMBL:Z27116 GO:GO:0008186
RefSeq:NP_013012.3 GeneID:853961 KEGG:sce:YKR086W KO:K12815
GO:GO:0000350 GeneTree:ENSGT00700000104877 OrthoDB:EOG4GQTD2
EMBL:M31524 EMBL:Z28311 PIR:S38164 RefSeq:NP_013014.3
ProteinModelPortal:P15938 SMR:P15938 DIP:DIP-2824N IntAct:P15938
MINT:MINT-1699731 STRING:P15938 PaxDb:P15938 PeptideAtlas:P15938
EnsemblFungi:YKR086W GeneID:853963 KEGG:sce:YKR088C CYGD:YKR086w
OMA:IDCGYSK NextBio:975386 Genevestigator:P15938 GermOnline:YKR086W
Uniprot:P15938
Length = 1071
Score = 406 (148.0 bits), Expect = 4.6e-67, Sum P(2) = 4.6e-67
Identities = 133/471 (28%), Positives = 223/471 (47%)
Query: 541 REYSVQTQQSLSCWNP--DSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQLQ 598
R + VQT + NP D + + + V H+ G +L+FMTG +DI + D LQ
Sbjct: 528 RTFPVQT---IYTSNPVQDYVEAAVSQAVKIHLANDCSSGDILIFMTGQEDIETTFDTLQ 584
Query: 599 AHPL------LG-----DPSRVLLLACHGSMASSEQRLIFDKPEDGVRKIVLATNMAETS 647
L G + + + +L + ++ + Q IF RKI++ATN+AETS
Sbjct: 585 EKFLQVYSKKFGTANFEEINDIEILPIYSALPADLQFKIFQDLHGTKRKIIIATNIAETS 644
Query: 648 ITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPR 707
+TI + +VIDCG +K Y+ L+ + ISK PG Y LY
Sbjct: 645 LTIKGIRYVIDCGYSKLKVYNPKIGLDSLVITPISKANADQRSGRAGRTAPGTAYRLYTE 704
Query: 708 YVYDAFADYQ-LPELLRTPLQSLCLQIKSLQL-GSISEFLSRALQPPEPLSVKNAIEYLQ 765
+ Q +PE+ RT L + L +KSL + +S+F +PP + + E L
Sbjct: 705 DTFKEDMYLQTIPEIQRTNLSNTLLLLKSLDVTDELSKF-PFIDKPPLQTFLSSLYE-LW 762
Query: 766 IIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPF 825
IGA+D + LT LG ++ P++P L K+L++ C D ++T+V+ LSV F P
Sbjct: 763 FIGAIDTSGQLTPLGLQMAKFPLQPSLSKILLIAVRNGCSDEMLTIVSMLSVPQVFYRPK 822
Query: 826 DKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYEYCWKNFLSAQTLKAIDSL 885
+++ A+ A+ +F SDHL L+ ++ W+ A S +C K+F+ ++L +
Sbjct: 823 ERQKEADIARNKFFIAK-SDHLTLLNVFEQWR-ANNFSS--HWCNKHFVQYKSLVRARDI 878
Query: 886 RKQFLFLLKDAGLVDRNTENCNKWSHDEHLIRAVICAGLFPGLCSVVNKEKSIALKTMED 945
R Q L +LK + ++ W +I+ IC+G + + LKT
Sbjct: 879 RDQLLTILKSQKIPVISSGK--DWD----IIKKCICSGFAHQAAKITGLRNYVHLKT--G 930
Query: 946 GQVLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVSDSVLLLFGG 996
V L+ S G+ +P P++V++E + + ++ T V L+ +GG
Sbjct: 931 VSVQLHPTSALHGLGDLP-PYVVYHELLMTSKEYICCVTSVDPFWLMEYGG 980
Score = 365 (133.5 bits), Expect = 4.6e-67, Sum P(2) = 4.6e-67
Identities = 123/413 (29%), Positives = 187/413 (45%)
Query: 92 PLLEQQTSNYGRYA--YQDESSD--DSDREFGSTQQQ---MCGSTLDNIDEWRWKLTMLL 144
P EQQT N Y+ S+ + DRE+ + L + E KL ++
Sbjct: 144 PNSEQQTQNGHAETKDYEPTRSEVVEEDREWYDNDDDYGNLVPEPLSELPE-EAKLLPVI 202
Query: 145 RNKDEQEVVSRAKKDRRDFEQLSA--LATRMGLHSRQYAKVVVFSKAPLPNYRSDLDEKR 202
RN D + + R+ QL L RM +K + +K P + E
Sbjct: 203 RNIDNDDAL-------RNTVQLYPIPLKQRMEWIPPFLSKFALENKVPTSIIIGSISETS 255
Query: 203 PQREVILPFGLLREVDAHLKAYLSQKYINASMSSLSNVGSTTNDEGLYEQQEQL-VQNSV 261
Q + R D+ A + + + +L + N E + + ++ V N+
Sbjct: 256 SQVSALSMVNPFRNPDSEFSANAKR---GSKLVALRRI----NMEHIQQSRDNTTVLNTA 308
Query: 262 VRERILRQRSLQMHEK--QQAWQES----PEGQKMLEFRRSLPSYKERDALLKAISENQV 315
+ E + + + + +K Q+ ++ P + + LP ++ R LL I ENQV
Sbjct: 309 MGEVLGLENNNKAKDKSNQKICDDTALFTPSKDDIKHTKEQLPVFRCRSQLLSLIRENQV 368
Query: 316 VVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEKLG 375
VV+ GETG GKTTQL QY+ E RG SI+ TQPRR++A++V++RVA E LG
Sbjct: 369 VVIIGETGSGKTTQLAQYLYEEGYANDRGK--SIVVTQPRRVAAISVAKRVAMEMQVPLG 426
Query: 376 ESVGYKVRLEGMKGRD-TRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLL 434
+ VGY +R E + + T+L F T GI + VI+DE HER +N D LL
Sbjct: 427 KEVGYSIRFEDVTDSECTKLKFVTDGILLRETLLDDTLDKYSCVIIDEAHERSLNTDILL 486
Query: 435 IVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYFLEN 487
SAT+NA+ FS++FG AP IPG T+PV+ + N
Sbjct: 487 GFFKILLARRRDLKLIITSATMNAKKFSAFFGNAPQFTIPGRTFPVQTIYTSN 539
>UNIPROTKB|G4NFJ0 [details] [associations]
symbol:MGG_08807 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:CM001236 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 KO:K12818 RefSeq:XP_003719164.1
ProteinModelPortal:G4NFJ0 EnsemblFungi:MGG_08807T0 GeneID:2678973
KEGG:mgr:MGG_08807 Uniprot:G4NFJ0
Length = 1207
Score = 438 (159.2 bits), Expect = 6.7e-67, Sum P(3) = 6.7e-67
Identities = 116/423 (27%), Positives = 212/423 (50%)
Query: 575 ERPGAVLVFMTGWDDINSLKDQL-QAHPLLGDPS--RVLLLACHGSMASSEQRLIFDKPE 631
E PG +L+F+TG ++I++ + L + LG PS +++L + ++ + Q IFD
Sbjct: 748 EPPGDILLFLTGQEEIDTSCEILFERMKALG-PSVPELIILPVYSALPNEMQSRIFDPAP 806
Query: 632 DGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXX 691
G RK+V+ATN+AETSITI+ + +V+D G K+ +YD L+ + IS+
Sbjct: 807 PGSRKVVIATNIAETSITIDHIYYVVDPGFVKQNAYDPKLGMDSLVVTPISQAQANQRAG 866
Query: 692 XXXXVQPGECYHLYPRYVYDA-FADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQ 750
PG+C+ LY Y +PE+ R L + L +K++ + + F +
Sbjct: 867 RAGRTGPGKCFRLYTEAAYQTEMLPTSIPEIQRQNLSNTILLLKAMGINDLLHF--DFMD 924
Query: 751 PPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMT 810
PP ++ A+E L + ALD+ LT LGR ++ P+EP L K+LI C D +++
Sbjct: 925 PPPINTMLTALEELYALSALDDEGLLTRLGRKMADFPMEPSLSKVLIASVEMRCSDEMLS 984
Query: 811 VVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYEYCW 870
+VA L++ + F P +K+ A++ KA+F + DHL L+ Y+ WK + R+ +C
Sbjct: 985 IVAMLNLPNVFYRPKEKQTQADAKKAKFHDPN-GDHLTLLNVYNAWKQS-RYSK--PWCA 1040
Query: 871 KNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDEHLIRAVICAGLFPGLCS 930
+NF+ + L +R Q +++ +C D + +R +C+G F +
Sbjct: 1041 ENFIQFRALTRARDVRNQIERIMQR---FKYQVMSCGS---DTNRVRQALCSGFFR---N 1091
Query: 931 VVNKEKSIALKTMEDGQ-VLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVSDS 989
K++ +T+ +G V L+ +S G W++++ + ++ +T +
Sbjct: 1092 AARKDQQEGYRTLIEGTPVYLHPSSALFGKHA---EWVIYHTLVLTTKEYMHCTTSIEPK 1148
Query: 990 VLL 992
L+
Sbjct: 1149 WLV 1151
Score = 337 (123.7 bits), Expect = 6.7e-67, Sum P(3) = 6.7e-67
Identities = 97/300 (32%), Positives = 146/300 (48%)
Query: 200 EKRPQREVILPFGLL-REVDAHLKAYLSQKYINASMSSLSNVGSTTNDE-GLYEQQEQLV 257
E P R V P G L R A +K I + + + TN + L Q E +
Sbjct: 430 ELSPIRVVKAPDGSLNRAAMAGTSLVKERKEIRQQEAEAAAQAAATNGKVDLASQWEDPM 489
Query: 258 QNSVVRERILRQRSLQMHEKQQA---WQES--PEGQK--------MLEFRRSLPSYKERD 304
+ R+ R + +A W+++ P+ Q + + R SLP + R+
Sbjct: 490 ADPDKRKFAADMRRTMQNRPSEAVPEWRQAIAPKNQSFGKRTNMTIKQQRESLPVFAFRE 549
Query: 305 ALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAVSE 364
L+KA+ ENQ+++V GETG GKTTQL QY+ E+ A G I CTQPRR++AM+V++
Sbjct: 550 QLIKAVKENQIMIVVGETGSGKTTQLTQYLAEAGF-ANEGV---IGCTQPRRVAAMSVAK 605
Query: 365 RVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIH 424
RV+ E G +LG+ VGY +R E TR+ + T G+ + +++DE H
Sbjct: 606 RVSEEVGCELGQEVGYTIRFEDCTSPATRIKYMTDGMLQREIVIDPDLKRYSVIMLDEAH 665
Query: 425 ERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYF 484
ER + D L + SATL+A+ FS+YF P+ IPG T+PV +
Sbjct: 666 ERTIATDVLFALLKKATRRRPDLKIIVTSATLDADKFSAYFNECPIFTIPGRTFPVEILY 725
Score = 43 (20.2 bits), Expect = 6.7e-67, Sum P(3) = 6.7e-67
Identities = 14/49 (28%), Positives = 22/49 (44%)
Query: 87 KAVSYPLLEQQTSNYGRYAYQDESSDDSDREFGSTQQQ-MCGSTLDNID 134
KA YP LE+ +N Q E +D D E + + G T +++
Sbjct: 382 KASDYPELEEDYNNALSGEGQMELEEDVDIEIRDEEPPFLAGQTKQSLE 430
>UNIPROTKB|G4NHA6 [details] [associations]
symbol:MGG_03893 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp43" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:CM001236 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 RefSeq:XP_003719983.1
EnsemblFungi:MGG_03893T0 GeneID:2677480 KEGG:mgr:MGG_03893
Uniprot:G4NHA6
Length = 779
Score = 419 (152.6 bits), Expect = 1.5e-65, Sum P(3) = 1.5e-65
Identities = 123/437 (28%), Positives = 223/437 (51%)
Query: 575 ERPGAVLVFMTGWDDINSL--KDQLQAHPLLGD----PSRVLLLACHGSMASSEQRLIFD 628
E G +L+F+TG ++I + K +L+ L+ D P V L +G++ +Q+ IF+
Sbjct: 315 EAEGDILLFLTGEEEIEDVCRKVRLEVDELIRDADCGPMEVYPL--YGTLPPQQQQKIFN 372
Query: 629 KPEDGV-------RKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWI 681
+ RK ++ATN+AETS+TI+ +V+V+D G +K+ Y+A LL + I
Sbjct: 373 AAPPPLKKGGRPGRKCIVATNIAETSLTIDGIVYVVDPGFSKQKIYNARIRVESLLVTPI 432
Query: 682 SKXXXXXXXXXXXXVQPGECYHLYPRYVYDA-FADYQLPELLRTPLQSLCLQIKSLQLGS 740
S+ +PG+C+ LY + + PE+LR+ L + L++K L +
Sbjct: 433 SRASAQQRAGRAGRTRPGKCFRLYTEAAFKKELIEQTYPEILRSNLSNTILELKKLGVDD 492
Query: 741 ISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGA 800
+ F + PP P ++ A+E L + L+++ +LT LG S P++P L ML+
Sbjct: 493 LVHF--DFMDPPAPETMMRALEELNYLSCLNDDGDLTDLGHMASEYPLDPALAVMLVSSP 550
Query: 801 IFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWK-DA 859
F C + +++V + LSV F+ P + + A+ K F + DHL L+ AY +K +
Sbjct: 551 EFYCSNEMLSVTSLLSVPQVFMRPANNRKRADEMKEHFKHME-GDHLTLLNAYHAFKSEM 609
Query: 860 ERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLK--DAGLVDRNTENCNKWSHDEHLIR 917
+ ++C ++FLS + L + D++R Q +++ D LV + N +++ IR
Sbjct: 610 AKGTDMKKWCHEHFLSYRHLSSADNVRAQLKGIMERQDLELVSTPFTDKNYYTN----IR 665
Query: 918 AVICAGLFPGLCSVVNKEKSIAL-KTMEDGQ-VLLYSNSVNAGVPKIPYPWLVFNEKIKV 975
+ AG F V +E S + T++D Q V+L+ +SV Y W++++E +
Sbjct: 666 RCLVAGFF---MQVALRETSGKVYHTIKDNQNVMLHPSSVLT----TDYEWVLYHEFVLT 718
Query: 976 NSVFLRDSTGVSDSVLL 992
+ ++R TG+ L+
Sbjct: 719 SKQYIRTVTGIRPEWLI 735
Score = 332 (121.9 bits), Expect = 1.5e-65, Sum P(3) = 1.5e-65
Identities = 73/196 (37%), Positives = 105/196 (53%)
Query: 289 KMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACS 348
K+L+ RR+LP ++ R L + Q++V GETG GKTTQ+PQY+L E
Sbjct: 99 KILKTRRNLPVHQHRQEFLDVYHKTQIMVFVGETGSGKTTQIPQYVLYDELPHLNKKM-- 156
Query: 349 IICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXX 408
+ CTQPRR++AM+V++RVA E +LG+ VGY +R E T L + T G
Sbjct: 157 VACTQPRRVAAMSVAQRVADELDVELGQEVGYSIRFENKTTPSTILKYMTDGQLLRETIH 216
Query: 409 XXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGA 468
+ +I+DE HER + D L+ + MSATL+A F YF A
Sbjct: 217 DPNMTRYSCIIIDEAHERTLATDILMALLKQLSLRRSDLKIIIMSATLDAAKFQRYFFEA 276
Query: 469 PMLHIPGFTYPVRAYF 484
P+L +PG T+PV ++
Sbjct: 277 PILAVPGRTHPVEIFY 292
Score = 42 (19.8 bits), Expect = 1.5e-65, Sum P(3) = 1.5e-65
Identities = 21/93 (22%), Positives = 36/93 (38%)
Query: 109 ESSDDSDREFGSTQQQMCGSTLDNIDEWRWKLTMLLRNKDEQEVVSRAKKDRRDFEQLSA 168
+ SD + + M G+ + D L L++ E + K E
Sbjct: 29 KGSDATSDGYNPYLAHMNGNGEGDGDGRSGSLASLVKGLTRHETTA---KQAEKLEDADT 85
Query: 169 LATRMGLHSRQYAKVVVFSK-APLPNYRSD-LD 199
A G HS+QY K++ + P+ +R + LD
Sbjct: 86 NAFTGGSHSQQYFKILKTRRNLPVHQHRQEFLD 118
>UNIPROTKB|E1BDN4 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP CTD:60625
EMBL:DAAA02036576 EMBL:DAAA02036577 EMBL:DAAA02036578
IPI:IPI00707123 RefSeq:NP_001179272.1 UniGene:Bt.52291
Ensembl:ENSBTAT00000005281 GeneID:513148 KEGG:bta:513148
NextBio:20870723 Uniprot:E1BDN4
Length = 703
Score = 468 (169.8 bits), Expect = 1.9e-65, Sum P(2) = 1.9e-65
Identities = 119/442 (26%), Positives = 227/442 (51%)
Query: 556 PDSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQL--QAHPL--LGDPSRVLL 611
PD I + +E V+ I + E G +L F+TG +++ ++ L QA L G + +
Sbjct: 255 PDYIK-STVETVM-KIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGQTGMKRHLRI 312
Query: 612 LACHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALN 671
L + + S EQ +F++ VRK+++ATN+AETSITI+ +V+VIDCG K +Y+
Sbjct: 313 LPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRT 372
Query: 672 NTPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCL 731
CL+ +S+ + G+CY LY +D +PE+ R+ L + L
Sbjct: 373 AIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDQLPQSTVPEMQRSNLAPVIL 432
Query: 732 QIKSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTV-LGRNLSMLPVEP 790
Q+K+L + ++ F + PP S+ A+E L +G LD++ LT LG ++ P+ P
Sbjct: 433 QLKALGIDNVLRF--HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNP 490
Query: 791 KLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALV 850
KML+ F C ++++ A + +++ F++P ++K A A +F+ + DHL ++
Sbjct: 491 MFAKMLLESGNFGCSQEILSIAAMMQIQNVFVVPSNQKSQAIRAHRKFAVEE-GDHLTML 549
Query: 851 RAYDGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWS 910
Y+ + +H ++C ++FL+ + L ++R+Q LL + +++E
Sbjct: 550 NVYEAFI---KHNKNSQWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPKKSSEG----- 601
Query: 911 HDEHLIRAVICAGLFPGLCSVVNKEKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFN 970
+ ++R ++ +G F + + A +T+ D L + + + + P W+++N
Sbjct: 602 DPDPVLRCIV-SGFF---ANAARFHSTGAYRTIRDDHEL-HIHPASVLYAEKPPRWVIYN 656
Query: 971 EKIKVNSVFLRDSTGVSDSVLL 992
E I+ + ++RD T + + LL
Sbjct: 657 EVIQTSKYYMRDVTAIESAWLL 678
Score = 269 (99.8 bits), Expect = 1.9e-65, Sum P(2) = 1.9e-65
Identities = 70/205 (34%), Positives = 104/205 (50%)
Query: 294 RRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQ 353
R+ LP +K R+ +L I Q VV+ GETGCGK+TQ+PQY+ E+ A G + TQ
Sbjct: 51 RQKLPVFKLRNHILYLIENYQTVVIIGETGCGKSTQIPQYLAEAGW-TAEGRVVGV--TQ 107
Query: 354 PRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGR-DTRLMFCTTGIXXXXXXXXXXX 412
PRR++A+ V+ RVA ERG LG VGY +R + TR+ F T G+
Sbjct: 108 PRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTNPLATRIKFLTDGMLVREMMVDPLL 167
Query: 413 XGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFG----GA 468
+ +++DE HER + D + + SATL+AE F +F
Sbjct: 168 TKYSAIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNHNDTSD 227
Query: 469 P------MLHIPGFTYPVRAYFLEN 487
P +L + G T+PV ++L++
Sbjct: 228 PTRDTCVILTVEGRTFPVDIFYLQS 252
>CGD|CAL0005059 [details] [associations]
symbol:orf19.2818 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0000386
"second spliceosomal transesterification activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 CGD:CAL0005059
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000080 EMBL:AACQ01000079 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12815
RefSeq:XP_715749.1 RefSeq:XP_715799.1 STRING:Q5A227 GeneID:3642531
GeneID:3642595 KEGG:cal:CaO19.10336 KEGG:cal:CaO19.2818
Uniprot:Q5A227
Length = 1070
Score = 397 (144.8 bits), Expect = 3.2e-65, Sum P(3) = 3.2e-65
Identities = 113/359 (31%), Positives = 181/359 (50%)
Query: 578 GAVLVFMTGWDDINSLKDQLQAH-PLLGDPSRVLLLACHGSMASSEQRLIFDKPEDGVRK 636
G +LVFMTG +DI D ++ LL DP + + + +M Q+ IF+K RK
Sbjct: 583 GDILVFMTGQEDIEITCDLIKEKLNLLEDPPPLDIFPIYSTMPQDLQKKIFNKTNLQRRK 642
Query: 637 IVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXXXV 696
+V+ATN+AETS+T++ + +VIDCG K Y+ L IS
Sbjct: 643 VVVATNIAETSLTVDGIKYVIDCGLVKVKVYNPKLGMDTLQVVPISLANADQRSGRAGRT 702
Query: 697 QPGECYHLYPRYVYDAFADY--QLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPEP 754
G Y LY + + Y +PE+ R+ L ++ L +KSL++ I+ F L PP P
Sbjct: 703 GAGIAYRLYTEKATEPDSMYVQPIPEIQRSNLSNIMLLLKSLKVNDINSF--PFLDPP-P 759
Query: 755 LSVKNAIEY-LQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAI--FNCLDPVMTV 811
+ N Y L IGALD LT LG +++ P+EP L K+++L F+C + V+T+
Sbjct: 760 KDLLNCSLYDLWAIGALDNLGELTKLGHSMTQFPIEPTLAKLILLSTQPEFHCSEEVVTI 819
Query: 812 VAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWK-DAERHQSGY---- 866
VA LSV + F P ++ + A+ A+ +F + SDHL L+ ++ W + + + Y
Sbjct: 820 VAMLSVPNIFNRPKERANEADMAREKFIISE-SDHLTLLNVFNQWNINLNKFKGNYTKIN 878
Query: 867 EYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDEHLIRAVICAGLF 925
+C KNFL ++L ++ Q + ++K +N K D+ IR +CA +
Sbjct: 879 NWCNKNFLQLKSLYRAKDIKHQLMLIMK------KNKLAILKSKTDDD-IRKCLCASFY 930
Score = 366 (133.9 bits), Expect = 3.2e-65, Sum P(3) = 3.2e-65
Identities = 83/217 (38%), Positives = 118/217 (54%)
Query: 276 EKQQAWQESPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYIL 335
E++ A + Q + + R+SLP++ R+ LL I +NQV +V GETG GKTTQL Q++
Sbjct: 337 EEKNADVNETKHQDIQQQRKSLPAFAVRNDLLTTIRDNQVTIVIGETGSGKTTQLTQFLY 396
Query: 336 ESETEA---ARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMK-GRD 391
E A G I CTQPRR++AM+V++RV+ E KLGE VGY +R E +
Sbjct: 397 EDGFGANIDKNGEKRIIACTQPRRVAAMSVAKRVSEEMNCKLGEEVGYSIRFEDKTDNKK 456
Query: 392 TRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXX 451
T + + T GI + +I+DE HER +N D LL +
Sbjct: 457 TVIKYMTEGILLREILADPMLANYSCIIMDEAHERSLNTDILLGLFKNLLAKRKDLKLIV 516
Query: 452 MSATLNAELFSSYFGGAPMLHIPGFTYPVRAYFLENI 488
SAT+NA F+ +FG AP HIPG T+PV +F ++
Sbjct: 517 TSATMNANRFTKFFGVAPQFHIPGRTFPVEVFFNRDV 553
Score = 41 (19.5 bits), Expect = 5.2e-32, Sum P(2) = 5.2e-32
Identities = 10/47 (21%), Positives = 23/47 (48%)
Query: 142 MLLRNKDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSK 188
+L + KD + +V+ A + F + +A + + R + V F++
Sbjct: 505 LLAKRKDLKLIVTSATMNANRFTKFFGVAPQFHIPGRTFPVEVFFNR 551
Score = 39 (18.8 bits), Expect = 3.2e-65, Sum P(3) = 3.2e-65
Identities = 11/40 (27%), Positives = 20/40 (50%)
Query: 238 SNVGSTTNDEGLYEQQEQLVQNSVVRERILRQRSLQMHEK 277
SN+GS + E+ +Q +N+ V E + + +Q K
Sbjct: 319 SNIGSIIDTANTTEEIKQEEKNADVNET--KHQDIQQQRK 356
>WB|WBGene00003389 [details] [associations]
symbol:mog-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0006898 GO:GO:0002119
GO:GO:0008380 GO:GO:0006397 GO:GO:0010171 GO:GO:0003676
GO:GO:0042127 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570 PIR:S41025
RefSeq:NP_499212.1 UniGene:Cel.5743 ProteinModelPortal:P34498
SMR:P34498 IntAct:P34498 STRING:P34498 PaxDb:P34498 PRIDE:P34498
EnsemblMetazoa:K03H1.2 GeneID:176409 KEGG:cel:CELE_K03H1.2
UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 425 (154.7 bits), Expect = 5.9e-65, Sum P(2) = 5.9e-65
Identities = 118/418 (28%), Positives = 206/418 (49%)
Query: 578 GAVLVFMTGWDDINSLKDQLQAH-PLLGDPSRVLLLACHGSMASSEQRLIFDKPEDGVRK 636
G +L+FM G +DI + ++ L + + +L + + S Q IF + G+RK
Sbjct: 651 GDILIFMPGQEDIECTCEMIKEKLGELDEAPPLAVLPIYSQLPSDLQAKIFQRAPGGMRK 710
Query: 637 IVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXXXV 696
++ATN+AETS+T++ ++FVID G K Y+ L +S+
Sbjct: 711 AIVATNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGRT 770
Query: 697 QPGECYHLYP-RYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPEPL 755
PG+CY LY R D +PE+ RT L ++ L +KSL + + +F + P
Sbjct: 771 GPGQCYRLYTERQFKDELLKSTVPEIQRTNLANVVLLLKSLGVDDLLKF--HFMDAPPQD 828
Query: 756 SVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGL 815
++ N++ L +GALD LT +GR + P++P L KMLI+ A C D V+T+V+ L
Sbjct: 829 NMLNSMYQLWTLGALDNTGQLTPMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVSML 888
Query: 816 SVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYEYCWKNFLS 875
SV F P +++ A++ K +F + SDHL + Y W+ H+ ++C N+L
Sbjct: 889 SVPAIFFRPKGREEEADAKKEKFQVPE-SDHLTFLNVYIQWRT---HKYSAKWCADNYLH 944
Query: 876 AQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDEHLIRAVICAGLFPGLCSVVNKE 935
+ LK + +R Q +++D L N ++W ++R IC+ F +
Sbjct: 945 VKALKKVREVRAQLKEIMQDLKLP--LISNGSEWD----IVRKCICSAYFHNAARLKGIG 998
Query: 936 KSIALKTMEDG-QVLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVSDSVLL 992
+ + ++T G L+ S G+ +P ++V++E I +++ T V D++ L
Sbjct: 999 EYVNVRT---GIPCFLHPTSALFGMGFMP-DYVVYHELIMTAKEYMQCVTAV-DAIWL 1051
Score = 326 (119.8 bits), Expect = 5.9e-65, Sum P(2) = 5.9e-65
Identities = 75/198 (37%), Positives = 103/198 (52%)
Query: 294 RRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQ 353
R LP + R ++ I EN VV++ GETG GKTTQL QY+LE G + I CTQ
Sbjct: 438 REYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLED----GFGDSGLIGCTQ 493
Query: 354 PRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXX 413
PRR++AM+V+ RVA E G LG+ VGY +R E T + + T GI
Sbjct: 494 PRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECLGDGSLD 553
Query: 414 GVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGG-APMLH 472
+ +I+DE HER +N D L + SAT++A+ F+ +FGG P
Sbjct: 554 QYSAIIMDEAHERSLNTDVLFGLLREVIAKRADLKLIVTSATMDADKFADFFGGNCPTFT 613
Query: 473 IPGFTYPVRAYFLENILE 490
IPG T+PV + +E
Sbjct: 614 IPGRTFPVELFHARTPVE 631
Score = 40 (19.1 bits), Expect = 6.9e-35, Sum P(2) = 6.9e-35
Identities = 7/32 (21%), Positives = 17/32 (53%)
Query: 502 IDDYGQEKSWKMQKQALALRKRKSSIASAVED 533
+ D+ EKS K Q++ L + + + + + +
Sbjct: 425 VSDFAMEKSIKQQREYLPVFACRQKMMNVIRE 456
Score = 37 (18.1 bits), Expect = 1.4e-34, Sum P(2) = 1.4e-34
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 211 FGLLREVDAHLKAYLSQKYINASMSS 236
FGLLREV A +A L +A+M +
Sbjct: 574 FGLLREVIAK-RADLKLIVTSATMDA 598
>UNIPROTKB|P34498 [details] [associations]
symbol:mog-1 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0006898
GO:GO:0002119 GO:GO:0008380 GO:GO:0006397 GO:GO:0010171
GO:GO:0003676 GO:GO:0042127 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570
PIR:S41025 RefSeq:NP_499212.1 UniGene:Cel.5743
ProteinModelPortal:P34498 SMR:P34498 IntAct:P34498 STRING:P34498
PaxDb:P34498 PRIDE:P34498 EnsemblMetazoa:K03H1.2 GeneID:176409
KEGG:cel:CELE_K03H1.2 UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 425 (154.7 bits), Expect = 5.9e-65, Sum P(2) = 5.9e-65
Identities = 118/418 (28%), Positives = 206/418 (49%)
Query: 578 GAVLVFMTGWDDINSLKDQLQAH-PLLGDPSRVLLLACHGSMASSEQRLIFDKPEDGVRK 636
G +L+FM G +DI + ++ L + + +L + + S Q IF + G+RK
Sbjct: 651 GDILIFMPGQEDIECTCEMIKEKLGELDEAPPLAVLPIYSQLPSDLQAKIFQRAPGGMRK 710
Query: 637 IVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXXXV 696
++ATN+AETS+T++ ++FVID G K Y+ L +S+
Sbjct: 711 AIVATNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGRT 770
Query: 697 QPGECYHLYP-RYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPEPL 755
PG+CY LY R D +PE+ RT L ++ L +KSL + + +F + P
Sbjct: 771 GPGQCYRLYTERQFKDELLKSTVPEIQRTNLANVVLLLKSLGVDDLLKF--HFMDAPPQD 828
Query: 756 SVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGL 815
++ N++ L +GALD LT +GR + P++P L KMLI+ A C D V+T+V+ L
Sbjct: 829 NMLNSMYQLWTLGALDNTGQLTPMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVSML 888
Query: 816 SVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYEYCWKNFLS 875
SV F P +++ A++ K +F + SDHL + Y W+ H+ ++C N+L
Sbjct: 889 SVPAIFFRPKGREEEADAKKEKFQVPE-SDHLTFLNVYIQWRT---HKYSAKWCADNYLH 944
Query: 876 AQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDEHLIRAVICAGLFPGLCSVVNKE 935
+ LK + +R Q +++D L N ++W ++R IC+ F +
Sbjct: 945 VKALKKVREVRAQLKEIMQDLKLP--LISNGSEWD----IVRKCICSAYFHNAARLKGIG 998
Query: 936 KSIALKTMEDG-QVLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVSDSVLL 992
+ + ++T G L+ S G+ +P ++V++E I +++ T V D++ L
Sbjct: 999 EYVNVRT---GIPCFLHPTSALFGMGFMP-DYVVYHELIMTAKEYMQCVTAV-DAIWL 1051
Score = 326 (119.8 bits), Expect = 5.9e-65, Sum P(2) = 5.9e-65
Identities = 75/198 (37%), Positives = 103/198 (52%)
Query: 294 RRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQ 353
R LP + R ++ I EN VV++ GETG GKTTQL QY+LE G + I CTQ
Sbjct: 438 REYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLED----GFGDSGLIGCTQ 493
Query: 354 PRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXX 413
PRR++AM+V+ RVA E G LG+ VGY +R E T + + T GI
Sbjct: 494 PRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECLGDGSLD 553
Query: 414 GVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGG-APMLH 472
+ +I+DE HER +N D L + SAT++A+ F+ +FGG P
Sbjct: 554 QYSAIIMDEAHERSLNTDVLFGLLREVIAKRADLKLIVTSATMDADKFADFFGGNCPTFT 613
Query: 473 IPGFTYPVRAYFLENILE 490
IPG T+PV + +E
Sbjct: 614 IPGRTFPVELFHARTPVE 631
Score = 40 (19.1 bits), Expect = 6.9e-35, Sum P(2) = 6.9e-35
Identities = 7/32 (21%), Positives = 17/32 (53%)
Query: 502 IDDYGQEKSWKMQKQALALRKRKSSIASAVED 533
+ D+ EKS K Q++ L + + + + + +
Sbjct: 425 VSDFAMEKSIKQQREYLPVFACRQKMMNVIRE 456
Score = 37 (18.1 bits), Expect = 1.4e-34, Sum P(2) = 1.4e-34
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 211 FGLLREVDAHLKAYLSQKYINASMSS 236
FGLLREV A +A L +A+M +
Sbjct: 574 FGLLREVIAK-RADLKLIVTSATMDA 598
>RGD|1306942 [details] [associations]
symbol:Tdrd9 "tudor domain containing 9" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0007140 "male meiosis" evidence=ISO;ISS]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=ISO;ISS] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0009566
"fertilization" evidence=ISO;ISS] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0031047 "gene silencing by RNA"
evidence=IEA] [GO:0034587 "piRNA metabolic process"
evidence=ISO;ISS] [GO:0043046 "DNA methylation involved in gamete
generation" evidence=ISO;ISS] [GO:0071547 "piP-body"
evidence=ISO;ISS] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 InterPro:IPR002999
RGD:1306942 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634 GO:GO:0030154
GO:GO:0009566 GO:GO:0007283 GO:GO:0003676 GO:GO:0031047
GO:GO:0007140 Pfam:PF00567 SMART:SM00333 PROSITE:PS50304
GO:GO:0043046 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0034587 eggNOG:COG1643 GeneTree:ENSGT00700000104393
GO:GO:0008026 GO:GO:0071547 CTD:122402 OrthoDB:EOG4F4S96
HOGENOM:HOG000047965 EMBL:AABR03050289 EMBL:AABR03048647
EMBL:AABR03049552 EMBL:AABR03049859 EMBL:AABR03050293
EMBL:AABR03051941 EMBL:BC104675 IPI:IPI00655293 IPI:IPI00895578
RefSeq:XP_001072421.2 UniGene:Rn.126122 STRING:Q3MHU3 PRIDE:Q3MHU3
Ensembl:ENSRNOT00000017118 GeneID:299343 KEGG:rno:299343
UCSC:RGD:1306942 NextBio:645254 Genevestigator:Q3MHU3
Uniprot:Q3MHU3
Length = 1384
Score = 437 (158.9 bits), Expect = 6.7e-65, Sum P(2) = 6.7e-65
Identities = 127/392 (32%), Positives = 194/392 (49%)
Query: 575 ERPGAVLVFMTGWDDINSLKDQLQAHPLLGDP--SRVLLLACHGSMASSEQRLIFDKPED 632
ER +VLVF+ G +IN + H LL + R+ + H S+ EQ +F P
Sbjct: 386 ER-SSVLVFLPGLGEINYM------HELLTNMIHKRLQVYPLHSSVTLEEQNNVFLSPVP 438
Query: 633 GVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXX 692
G RKI+L+TN+AE+S+T+ DV +VID + D N L SW SK
Sbjct: 439 GYRKIILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCDQRKGR 498
Query: 693 XXXVQPGECYHLYPRYVYD-AFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQP 751
V G CY L R +D A D+ +PE+LR PL S L++K L +G L+ AL P
Sbjct: 499 AGRVSKGYCYRLIHRDFWDSAIPDHVVPEMLRCPLGSTVLKVKLLDMGEPRALLATALSP 558
Query: 752 PEPLSVKNAIEYLQIIGAL-------DENEN---LTVLGRNLSMLPVEPKLGKMLILGAI 801
P ++ I L+ +GAL DEN + LT LGR L+ LPV +LGK+++LG +
Sbjct: 559 PSLSDIERTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQLPVSQQLGKLIVLGHV 618
Query: 802 FNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAE- 860
F CLD + + A LS+++ F MPF + K FS SD LALV A+ W+
Sbjct: 619 FGCLDECLIIAAALSLKNFFTMPFRQHLDGYRNKVHFSGSSRSDCLALVEAFRAWQACRQ 678
Query: 861 ----RHQSGYEYCWK--NFLSAQTLKAIDSLRKQFLFLLKDAGL-VD-RNTENCNKWSHD 912
RH E W N++ + ++ + L ++ + + VD R+ ++ +
Sbjct: 679 RGELRHPKD-ELDWGRLNYIQIKRIREVAELYEELKNRISQFNMFVDPRHPVLDQEYPYK 737
Query: 913 EHLIRAVICAGLF-PGLCSVVNKEKSIALKTM 943
+ I V+ AG F P + ++ +A++ +
Sbjct: 738 QRFILQVVLAGAFYPNYFTFGQPDEEMAVREL 769
Score = 316 (116.3 bits), Expect = 6.7e-65, Sum P(2) = 6.7e-65
Identities = 71/201 (35%), Positives = 107/201 (53%)
Query: 297 LPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRR 356
LP + ++ ++ I N VV++ G TG GK+TQLPQY+L+ T+ R A C+I+ TQPR+
Sbjct: 134 LPINRCKEEVISLIESNSVVIIHGATGSGKSTQLPQYVLDHYTQ--RSAFCNIVVTQPRK 191
Query: 357 ISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXGVT 416
I A +++ ++ ER LG VGY+V LE DTRL++ TTG+ T
Sbjct: 192 IGASSIARWISKERSWTLGGLVGYQVGLEKTATEDTRLIYMTTGVLLQKIVSAKSLMEFT 251
Query: 417 HVIVDEIHERGMNEDFLL-IVXXXXXXXXXXXXXXXMSATLNAELFSSYFG--------G 467
HV +DE+HER DFLL +V MSAT+N + F+ YF
Sbjct: 252 HVFIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVILMSATINCKQFADYFAVPVQNKMNP 311
Query: 468 APMLHIPGFTYPVRAYFLENI 488
A + + G + + Y+L ++
Sbjct: 312 AYVFEVEGKPHTIEQYYLNDL 332
Score = 46 (21.3 bits), Expect = 2.4e-23, Sum P(2) = 2.4e-23
Identities = 9/24 (37%), Positives = 10/24 (41%)
Query: 654 VFVIDCGKAKETSYDALNNTPCLL 677
VF +D G D L PC L
Sbjct: 980 VFFVDYGNRSHVDLDLLREIPCQL 1003
Score = 38 (18.4 bits), Expect = 1.6e-22, Sum P(2) = 1.6e-22
Identities = 12/39 (30%), Positives = 17/39 (43%)
Query: 726 LQSL---CLQIKSLQLGSISEFLSRALQPPEPLSVKNAI 761
LQSL C Q+KS+ F+ + P E A+
Sbjct: 794 LQSLFRQCGQVKSIVFDGAKAFVEFSRNPTERFKTLPAV 832
>TAIR|locus:2010549 [details] [associations]
symbol:AT1G27900 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0010332 "response to gamma
radiation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0032204 "regulation of telomere
maintenance" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12818 EMBL:AY054692
EMBL:AY128718 IPI:IPI00545738 RefSeq:NP_564296.1 UniGene:At.25438
ProteinModelPortal:Q93Y16 SMR:Q93Y16 PaxDb:Q93Y16 PRIDE:Q93Y16
EnsemblPlants:AT1G27900.1 GeneID:839683 KEGG:ath:AT1G27900
TAIR:At1g27900 InParanoid:Q93Y16 OMA:NCRRFIV PhylomeDB:Q93Y16
ProtClustDB:CLSN2688039 ArrayExpress:Q93Y16 Genevestigator:Q93Y16
Uniprot:Q93Y16
Length = 700
Score = 439 (159.6 bits), Expect = 7.2e-65, Sum P(2) = 7.2e-65
Identities = 123/426 (28%), Positives = 201/426 (47%)
Query: 574 KERPGAVLVFMTGWDDINSLKDQLQ--AHPLL-GDPSRVLLLACHGSMASSEQRLIFDKP 630
+E G +L+FMTG DDI L +L+ L G ++ HGS+ Q +F P
Sbjct: 210 REPEGDILIFMTGQDDIEKLVSRLEEKVRSLAEGSCMDAIIYPLHGSLPPEMQVRVFSPP 269
Query: 631 EDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXX 690
R+ +++TN+AETS+T++ VV+VID G K+ Y+ + L ISK
Sbjct: 270 PPNCRRFIVSTNIAETSLTVDGVVYVIDSGYVKQRQYNPSSGMFSLDVIQISKVQANQRA 329
Query: 691 XXXXXVQPGECYHLYPRYVY-DAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRAL 749
+PG+CY LYP VY D F D +PE+ RT L L +KSL L I L
Sbjct: 330 GRAGRTRPGKCYRLYPLAVYRDDFLDATIPEIQRTSLAGSVLYLKSLDLPDIDILKFDFL 389
Query: 750 QPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVM 809
P S+++A++ L I A+DEN +T +GR +S LP+EP L + LI CL +
Sbjct: 390 DAPSSESLEDALKQLYFIDAIDENGAITRIGRTMSDLPLEPSLSRTLIEANETGCLSQAL 449
Query: 810 TVVAGLSVRDPFL----MPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSG 865
TVVA LS L P +KK + + Y DH+ L++ ++ W +R
Sbjct: 450 TVVAMLSAETTLLPARSKPSEKKRKHDEDSNLPNGSGYGDHIQLLQIFESW---DRTNYD 506
Query: 866 YEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDR---NTENCNKWSHDEHL-IRAVIC 921
+C +N + + + + +R+Q +++ DR + S D++ +R +C
Sbjct: 507 PVWCKENGMQVRGMVFVKDVRRQLCQIMQKISK-DRLEVGADGRKSSSRDDYRKLRKALC 565
Query: 922 AGLFPGLCSVVNKEKSIALKTMEDGQVLLYSNSVNAGVPKIPYP-WLVFNEKIKVNSVFL 980
G + + + + + V ++ +SV + P ++V++E I F+
Sbjct: 566 VGNANQIAERMLRHNGYRTLSFQSQLVQVHPSSVLSADNDGMMPNYVVYHELISTTRPFM 625
Query: 981 RDSTGV 986
R+ V
Sbjct: 626 RNVCAV 631
Score = 297 (109.6 bits), Expect = 7.2e-65, Sum P(2) = 7.2e-65
Identities = 69/190 (36%), Positives = 99/190 (52%)
Query: 296 SLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPR 355
+LP + + +++ + +N VVV+ GETG GK+TQL Q IL G I TQPR
Sbjct: 3 NLPILQFEEKIVETVEKNSVVVIIGETGSGKSTQLSQ-ILHRHGYTKSGV---IAITQPR 58
Query: 356 RISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXGV 415
R++A++V+ RVA E LGE VGY +R E TR+ + T G+
Sbjct: 59 RVAAVSVARRVAQELDVPLGEDVGYAIRFEDRTTSKTRIKYLTDGVLLRESLSNPMLDDY 118
Query: 416 THVIVDEIHERGMNEDFLL-IVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIP 474
+ +I+DE HER +N D LL +V SATL+ E S +F G P+L++P
Sbjct: 119 SVIILDEAHERSLNTDILLGLVKRLVRIRASNFKVLITSATLDGEKVSEFFSGCPVLNVP 178
Query: 475 GFTYPVRAYF 484
G YPV +
Sbjct: 179 GKLYPVEILY 188
>MGI|MGI:1921941 [details] [associations]
symbol:Tdrd9 "tudor domain containing 9" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007126 "meiosis" evidence=IEA] [GO:0007140 "male meiosis"
evidence=IMP] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0009566 "fertilization" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0034587 "piRNA metabolic process" evidence=IMP] [GO:0043046
"DNA methylation involved in gamete generation" evidence=IMP]
[GO:0071547 "piP-body" evidence=IDA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
InterPro:IPR002999 MGI:MGI:1921941 GO:GO:0007275 GO:GO:0005524
GO:GO:0005634 GO:GO:0030154 GO:GO:0009566 GO:GO:0007283
GO:GO:0003676 GO:GO:0031047 GO:GO:0007140 Pfam:PF00567
SMART:SM00333 PROSITE:PS50304 GO:GO:0043046 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0034587 eggNOG:COG1643
GeneTree:ENSGT00700000104393 GO:GO:0008026 GO:GO:0071547
EMBL:AC112520 OMA:INDWFTI CTD:122402 OrthoDB:EOG4F4S96
EMBL:AB362563 EMBL:AC132623 EMBL:BC115831 EMBL:BC116656
IPI:IPI00749982 IPI:IPI00849630 IPI:IPI00914159 RefSeq:NP_083332.1
UniGene:Mm.60648 ProteinModelPortal:Q14BI7 SMR:Q14BI7 STRING:Q14BI7
PhosphoSite:Q14BI7 PaxDb:Q14BI7 PRIDE:Q14BI7
Ensembl:ENSMUST00000079009 GeneID:74691 KEGG:mmu:74691
UCSC:uc007pei.1 UCSC:uc007pej.1 UCSC:uc011yva.1
HOGENOM:HOG000047965 HOVERGEN:HBG072266 InParanoid:B1Q3J8
NextBio:341402 Bgee:Q14BI7 Genevestigator:Q14BI7 Uniprot:Q14BI7
Length = 1383
Score = 433 (157.5 bits), Expect = 1.1e-64, Sum P(2) = 1.1e-64
Identities = 124/391 (31%), Positives = 192/391 (49%)
Query: 575 ERPGAVLVFMTGWDDINSLKDQLQAHPLLGDP--SRVLLLACHGSMASSEQRLIFDKPED 632
ER +VLVF+ G +IN + H LL + R+ + H S+ EQ +F P
Sbjct: 385 ER-SSVLVFLPGLGEINYM------HELLTNMIHKRLQVYPLHSSVTLEEQNNVFLSPVP 437
Query: 633 GVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXX 692
G RKI+L+TN+AE+S+T+ DV +VID + D N L SW SK
Sbjct: 438 GYRKIILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCDQRKGR 497
Query: 693 XXXVQPGECYHLYPRYVYD-AFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQP 751
V G CY L PR +D A D+ +PE+LR PL S L++K L +G L+ AL P
Sbjct: 498 AGRVSKGYCYRLIPRDFWDSAIPDHVVPEMLRCPLGSTILKVKLLDMGEPRALLATALSP 557
Query: 752 PEPLSVKNAIEYLQIIGAL-------DENEN---LTVLGRNLSMLPVEPKLGKMLILGAI 801
P ++ I L+ +GAL DEN + LT LGR L+ LPV +LGK+++LG +
Sbjct: 558 PSLSDIERTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQLPVSQQLGKLVVLGHV 617
Query: 802 FNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDA-- 859
F CLD + + A LS+++ F MPF + K FS SD LALV A+ W+
Sbjct: 618 FGCLDECLIIAAALSLKNFFTMPFRQHLDGYRNKVHFSGSSRSDCLALVEAFRAWQACRQ 677
Query: 860 --ERHQSGYEYCWK--NFLSAQTLKAIDSLRKQFLFLLKDAGLV--DRNTENCNKWSHDE 913
E + E W N++ + ++ + L ++ + + + ++ + +
Sbjct: 678 RGELRRPKDELDWGRLNYIQIKRIREVAELYEELKNRISQFNMFVGPHHPVLDQEYPYKQ 737
Query: 914 HLIRAVICAGLF-PGLCSVVNKEKSIALKTM 943
I V+ AG F P + ++ +A++ +
Sbjct: 738 RFILQVVLAGAFYPNYFTFGQPDEEMAVREL 768
Score = 318 (117.0 bits), Expect = 1.1e-64, Sum P(2) = 1.1e-64
Identities = 80/254 (31%), Positives = 129/254 (50%)
Query: 297 LPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRR 356
LP + ++ ++ I N VV++ G TG GK+TQLPQY+L+ T+ R A C+I+ TQPR+
Sbjct: 134 LPINRCKEEVISLIESNSVVIIHGATGSGKSTQLPQYVLDHYTQ--RSAFCNIVVTQPRK 191
Query: 357 ISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXGVT 416
I A +++ ++ ER LG VGY+V LE + DTRL++ TTG+ T
Sbjct: 192 IGASSIARWISKERSWTLGGLVGYQVGLEKIATEDTRLIYMTTGVLLQKIVSAKSLMEFT 251
Query: 417 HVIVDEIHERGMNEDFLL-IVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHI-- 473
H+ +DE+HER DFLL +V MSAT+N + F+ YF P+ +
Sbjct: 252 HIFIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVVLMSATINCKQFADYFA-VPVQNKMN 310
Query: 474 PGFTYPVRAYFLENILEMTRYRLNTYNQIDDYGQEKSWKMQKQALALRKRKSSIASAVED 533
P + + V + +E Y LN I Y +++++ + K +A ++
Sbjct: 311 PAYVFEVEGK--PHAIE--EYYLNDLGHI--YHSGLPYRLEEPVIT--KDVYEVAVSLIQ 362
Query: 534 ALEAADFREYSVQT 547
+ D +E +T
Sbjct: 363 MFDDLDMKESGNKT 376
Score = 44 (20.5 bits), Expect = 2.4e-23, Sum P(2) = 2.4e-23
Identities = 8/22 (36%), Positives = 9/22 (40%)
Query: 654 VFVIDCGKAKETSYDALNNTPC 675
VF +D G D L PC
Sbjct: 979 VFFVDYGNRSHVDLDLLREIPC 1000
Score = 39 (18.8 bits), Expect = 7.9e-23, Sum P(2) = 7.9e-23
Identities = 15/56 (26%), Positives = 23/56 (41%)
Query: 726 LQSL---CLQIKSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTV 778
LQSL C Q+KS+ F+ + P E A+ + L + L+V
Sbjct: 793 LQSLFRQCGQVKSIVFDGAKAFVEFSRNPTERFKTLPAVNLAVKMSQLKVSLELSV 848
>POMBASE|SPAC2G11.11c [details] [associations]
symbol:prh1 "ATP-dependent RNA helicase Prh1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0042254 "ribosome
biogenesis" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
PomBase:SPAC2G11.11c GO:GO:0005524 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0006397 GO:GO:0042254 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K14781 OrthoDB:EOG4F7RTB EMBL:D13249 PIR:S35546 PIR:S62466
RefSeq:NP_593091.1 ProteinModelPortal:Q03319
EnsemblFungi:SPAC2G11.11c.1 GeneID:2541750 KEGG:spo:SPAC2G11.11c
OMA:MANDTTI NextBio:20802841 Uniprot:Q03319
Length = 719
Score = 395 (144.1 bits), Expect = 1.2e-64, Sum P(2) = 1.2e-64
Identities = 124/443 (27%), Positives = 215/443 (48%)
Query: 541 REYSVQTQQSLSCWNPDSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQLQAH 600
R+Y VQ + + PD + L + + K PG +LVF+TG D+I +L+ ++++
Sbjct: 271 RQYPVQIHYTYTP-EPDYLDACL--RTIFQLHTKLPPGDILVFLTGQDEIEALEALIKSY 327
Query: 601 PLLGDPSRVLLLAC--HGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVID 658
+ + AC S+ +Q +F RK+VL+TN+AETS+TI+ + +VID
Sbjct: 328 SKQLPSNLPQIQACPLFASLPQEQQLQVFLPALANHRKVVLSTNIAETSVTISGIRYVID 387
Query: 659 CGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQL 718
G AK +++ L IS+ G+CY +Y +D +
Sbjct: 388 TGLAKIKQFNSKLGLESLTVQPISQSAAMQRSGRAGREAAGQCYRIYTEADFDKLPKETI 447
Query: 719 PELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTV 778
PE+ R L L +K+ + F + PP + A+E+L IGALD+N ++
Sbjct: 448 PEIKRIDLSQAVLTLKARGQNDVINF--HYMDPPSKEGLLRALEHLYSIGALDDNGHIND 505
Query: 779 LGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQF 838
LG +S++P+ P L + ++ NCL V+ VV+ LS FL P +K+D A A+ +F
Sbjct: 506 LGYQMSLIPLLPSLARAVLAAREHNCLSEVIDVVSCLSTDSMFLFPQEKRDEAIEARLKF 565
Query: 839 SARDYSDHLALVRAYDGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGL 898
+ D L + A + ++ H S ++C +NF++ + LK I +RKQ L++ L
Sbjct: 566 LHSE-GDLLTCLNALRQYLESS-HDSRKQWCSQNFINRRALKTILDIRKQ----LREHCL 619
Query: 899 VDRNTENCNKWSHDEHLIRAVICAGLFPGLCSVVNKEKSIALKTMEDGQVL-LYSNSVNA 957
D N + + E+L+ + + +G ++++ + S +T+ Q + ++ +S
Sbjct: 620 KDGWELNSSPEVNSENLLLSFL-SGYITNT-ALLHPDGSY--RTIIGNQTISIHPSSSLF 675
Query: 958 G--VPKIPYPWLVFNEKIKVNSV 978
G V I Y LVF K V V
Sbjct: 676 GKKVEAIMYHELVFTTKSYVRGV 698
Score = 345 (126.5 bits), Expect = 1.2e-64, Sum P(2) = 1.2e-64
Identities = 80/204 (39%), Positives = 118/204 (57%)
Query: 282 QESPEGQK-MLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETE 340
+ SP +K +LE R++LP ++ D L + I +N+V+VV GETG GK+TQ+PQ++ E
Sbjct: 80 ENSPSKRKDILEQRKNLPIWEAHDTLCQQIQDNRVIVVVGETGSGKSTQIPQFLNECPY- 138
Query: 341 AARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTG 400
A G C I TQPRR++A+ +++RVAAE+G +LGE VGY +R + + TR+ + T G
Sbjct: 139 AQEG--CVAI-TQPRRVAAVNLAKRVAAEQGCRLGEQVGYSIRFDDTTSKKTRIKYLTDG 195
Query: 401 IXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAEL 460
+ +I+DE HER + D LL MSATLNAE
Sbjct: 196 MLLRELINDPILSQYHTLILDEAHERTLMTDMLLGFVKKIIKKRPALRVIIMSATLNAER 255
Query: 461 FSSYFGGAPMLHIPGFTYPVRAYF 484
FS +F GA + +I G YPV+ ++
Sbjct: 256 FSEFFDGAEICYISGRQYPVQIHY 279
>CGD|CAL0002409 [details] [associations]
symbol:orf19.5865 species:5476 "Candida albicans" [GO:0071006
"U2-type catalytic step 1 spliceosome" evidence=IEA] [GO:0000349
"generation of catalytic spliceosome for first transesterification
step" evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
CGD:CAL0002409 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AACQ01000003 EMBL:AACQ01000004
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12814 RefSeq:XP_722935.1 RefSeq:XP_723081.1 GeneID:3635187
GeneID:3635307 KEGG:cal:CaO19.13287 KEGG:cal:CaO19.5865
Uniprot:Q5ANN5
Length = 865
Score = 388 (141.6 bits), Expect = 1.2e-64, Sum P(2) = 1.2e-64
Identities = 102/345 (29%), Positives = 177/345 (51%)
Query: 577 PGAVLVFMTGWDDINSLKDQLQAHPL-LGDP-SRVLLLACHGSMASSEQRLIFDKPEDGV 634
PG +LVF+TG D+I ++++ L+ L LGD +++ + + ++ Q+ IF
Sbjct: 442 PGDILVFLTGQDEIETMEEILRDSILKLGDQIDPMIVCSIYANLPQELQQKIFQPTPSNT 501
Query: 635 RKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXX 694
RKIVLATN+AETSITI+ + +VID G K+ Y+ L+ S+
Sbjct: 502 RKIVLATNIAETSITIDGISYVIDPGYVKQNVYNPTTGMESLVVVPCSRASADQRAGRAG 561
Query: 695 XVQPGECYHLYPRY-VYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPE 753
V PG+C+ L+ ++ Y+ Q PE+ R L S+ L + SL + + F + PP
Sbjct: 562 RVGPGKCFRLFTKWSFYNELDSNQQPEIQRVNLTSVILLLLSLGINDLLGF--EFMDPPS 619
Query: 754 PLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVA 813
++ A+ L +GAL+ LT G+ +S P++P K ++ F+ +++++A
Sbjct: 620 KEAIIKALNLLYALGALNTQGKLTKTGKKMSEFPLDPVFTKCILTSDKFDNTKQIISIIA 679
Query: 814 GLSVRDP-FLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGY--EYCW 870
L+ F P DKK+LA+ K +F+ D L++ + W D SGY ++C
Sbjct: 680 MLNESSNLFYRPKDKKELADKRKQEFNDLQ-GDQFMLLKIWQQWVD-----SGYSVQWCQ 733
Query: 871 KNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDEHL 915
F+ +T+K I ++ +Q + L K G ++ N+ + H +HL
Sbjct: 734 DYFIQYKTMKRIKNIYEQLIRLSKKIG-IEVNSRH----QHRDHL 773
Score = 357 (130.7 bits), Expect = 1.2e-64, Sum P(2) = 1.2e-64
Identities = 91/248 (36%), Positives = 131/248 (52%)
Query: 245 NDEGLYE---QQEQLVQNSVVRERILRQRSLQMHEKQQAWQESPE--GQKMLEFRRSLPS 299
ND+ YE Q Q V + E L + E++ ++S G K E R+SLP
Sbjct: 174 NDDKEYEFVFDQTQFVNYDDIEE--LPGNGEEEEEEESGIRDSDSIIGNKYDEVRKSLPV 231
Query: 300 YKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRRISA 359
Y R+ LK I+ENQ ++V GETG GKTTQLPQY+ E +R I CTQPRR++A
Sbjct: 232 YSYREEFLKIINENQTLIVVGETGSGKTTQLPQYL--HEAGYSRNNQV-IACTQPRRVAA 288
Query: 360 MAVSERVAAERGEKLGESVGYKVRLE-GMKGRDTRLMFCTTGIXXXXXXXXXXXXGVTHV 418
+V+ RVA E KLGE VGY +R + K T + + T G+ + +
Sbjct: 289 TSVANRVANEMQVKLGEQVGYNIRFDDNCKDGVTVIKYVTDGMLLREFLQDPTLGKYSAI 348
Query: 419 IVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXM--SATLNAELFSSYFGGAPMLHIPGF 476
++DE HER ++ + LL + + SAT+NAE FS +F AP+L+IPG
Sbjct: 349 MIDEAHERTLSTEILLSLLKDVMMTTRKDDLKIIIASATINAEKFSQFFNNAPILNIPGR 408
Query: 477 TYPVRAYF 484
+PV+ ++
Sbjct: 409 RFPVKIHY 416
Score = 48 (22.0 bits), Expect = 3.7e-32, Sum P(2) = 3.7e-32
Identities = 13/57 (22%), Positives = 27/57 (47%)
Query: 139 KLTMLLRNKDEQEVV-SRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNY 194
K M+ KD+ +++ + A + F Q A + + R++ + ++K P NY
Sbjct: 368 KDVMMTTRKDDLKIIIASATINAEKFSQFFNNAPILNIPGRRFPVKIHYTKQPEANY 424
Score = 42 (19.8 bits), Expect = 1.6e-31, Sum P(2) = 1.6e-31
Identities = 31/152 (20%), Positives = 63/152 (41%)
Query: 150 QEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAP---LPNYRSDLDE-KRPQR 205
QE++ + + EQ++ + + AK S P LP+ + KRP+
Sbjct: 14 QELIDADDNEEEEREQITQQGPLKATSTIETAKPTPESNTPPLPLPSPPAPAQHYKRPKS 73
Query: 206 EVILPFGLLREVDAHLKAYLSQKYINASMSSLSNVGSTTNDEGLYEQQEQLVQNSVVRER 265
+ L E++ ++ LS + + + L+N + N QN
Sbjct: 74 KYYQFKQELEELE--IQEDLSPRQ-QSRLEYLTNKLNNWNRNN--NNNNNASQNEYYNLP 128
Query: 266 ILRQ-RSLQMHEKQQAWQESPEGQKMLEFRRS 296
L+Q ++ +H+KQQ++Q + +F+R+
Sbjct: 129 SLQQSKNDVLHQKQQSFQPPRMNWEDEQFKRA 160
Score = 40 (19.1 bits), Expect = 6.9e-28, Sum P(2) = 6.9e-28
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 658 DCGKAKETSYDALNNTPCLL-PS 679
DC + K T+ NNTPC + PS
Sbjct: 803 DCYQ-KLTNGKGGNNTPCYIHPS 824
>UNIPROTKB|Q8NDG6 [details] [associations]
symbol:TDRD9 "Putative ATP-dependent RNA helicase TDRD9"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0031047 "gene silencing by
RNA" evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0034587
"piRNA metabolic process" evidence=ISS] [GO:0007283
"spermatogenesis" evidence=ISS] [GO:0071547 "piP-body"
evidence=ISS] [GO:0043046 "DNA methylation involved in gamete
generation" evidence=ISS] [GO:0009566 "fertilization" evidence=ISS]
[GO:0007140 "male meiosis" evidence=ISS] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
InterPro:IPR002999 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0030154 GO:GO:0009566 GO:GO:0007283 GO:GO:0003676
GO:GO:0031047 GO:GO:0007140 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 GO:GO:0043046 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0034587 eggNOG:COG1643 GO:GO:0008026
GO:GO:0071547 EMBL:AL136001 OMA:INDWFTI EMBL:AL132712 EMBL:AL833915
EMBL:AK093483 EMBL:AK097429 EMBL:AK097699 EMBL:AK125978
EMBL:BC016796 EMBL:BC128057 IPI:IPI00384419 IPI:IPI00413613
PIR:G02632 RefSeq:NP_694591.2 UniGene:Hs.21454
ProteinModelPortal:Q8NDG6 SMR:Q8NDG6 STRING:Q8NDG6
PhosphoSite:Q8NDG6 DMDM:290457664 PaxDb:Q8NDG6 PRIDE:Q8NDG6
Ensembl:ENST00000339063 Ensembl:ENST00000409874 GeneID:122402
KEGG:hsa:122402 UCSC:uc001yom.4 UCSC:uc001yon.4 CTD:122402
GeneCards:GC14P104394 HGNC:HGNC:20122 HPA:HPA038120
neXtProt:NX_Q8NDG6 PharmGKB:PA134890186 InParanoid:Q8NDG6
OrthoDB:EOG4F4S96 GenomeRNAi:122402 NextBio:80877 Bgee:Q8NDG6
CleanEx:HS_TDRD9 Genevestigator:Q8NDG6 Uniprot:Q8NDG6
Length = 1382
Score = 432 (157.1 bits), Expect = 1.5e-64, Sum P(2) = 1.5e-64
Identities = 124/389 (31%), Positives = 196/389 (50%)
Query: 575 ERPGAVLVFMTGWDDINSLKDQLQAHPLLGDPSRVLLLACHGSMASSEQRLIFDKPEDGV 634
ER +VLVF+ G +IN + + L + L+ R+ + H S+A EQ +F P G
Sbjct: 384 ER-SSVLVFLPGLGEINYMHELLTS--LVH--KRLQVYPLHSSVALEEQNNVFLSPVPGY 438
Query: 635 RKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXX 694
RKI+L+TN+AE+S+T+ DV +VID + D N L SW SK
Sbjct: 439 RKIILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKGRAG 498
Query: 695 XVQPGECYHLYPRYVYD-AFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPE 753
V G CY L + +D + D+ +PE+LR PL S L++K L +G L+ AL PP
Sbjct: 499 RVSRGYCYRLVHKDFWDNSIPDHVVPEMLRCPLGSTILKVKLLDMGEPRALLATALSPPG 558
Query: 754 PLSVKNAIEYLQIIGAL-------DENEN---LTVLGRNLSMLPVEPKLGKMLILGAIFN 803
++ I L+ +GAL DEN + LT LGR L+ LPV +LGK+++LG +F
Sbjct: 559 LSDIERTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQLPVNQQLGKLIVLGHVFG 618
Query: 804 CLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERH- 862
CLD + + A LS+++ F MPF + K FS SD +ALV A+ WK +
Sbjct: 619 CLDECLIIAAALSLKNFFAMPFRQHLDGYRNKVNFSGSSKSDCIALVEAFKTWKACRQTG 678
Query: 863 QSGY---EYCWK--NFLSAQTLKAIDSLRKQFLFLLKDAGL-VD-RNTENCNKWSHDEHL 915
+ Y E W N++ + ++ + L ++ + + VD R ++ + +
Sbjct: 679 ELRYPKDELNWGRLNYIQIKRIREVAELYEELKTRISQFNMHVDSRRPVMDQEYIYKQRF 738
Query: 916 IRAVICAGLF-PGLCSVVNKEKSIALKTM 943
I V+ AG F P + ++ +A++ +
Sbjct: 739 ILQVVLAGAFYPNYFTFGQPDEEMAVREL 767
Score = 318 (117.0 bits), Expect = 1.5e-64, Sum P(2) = 1.5e-64
Identities = 73/212 (34%), Positives = 113/212 (53%)
Query: 297 LPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRR 356
LP + ++ ++ I N VV++ G TG GK+TQLPQYIL+ + R A CSI+ TQPR+
Sbjct: 132 LPISRYKEEVVSLIESNSVVIIHGATGSGKSTQLPQYILDHYVQ--RSAYCSIVVTQPRK 189
Query: 357 ISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXGVT 416
I A +++ ++ ER LG VGY+V LE + DTRL++ TTG+ T
Sbjct: 190 IGASSIARWISKERAWTLGGVVGYQVGLEKIATEDTRLIYMTTGVLLQKIVSAKSLMEFT 249
Query: 417 HVIVDEIHERGMNEDFLL-IVXXXXXXXXXXXXXXXMSATLNAELFSSYFG--------G 467
H+I+DE+HER DFLL +V MSAT++ + F+ YF
Sbjct: 250 HIIIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVVLMSATISCKEFADYFAVPVQNKMNP 309
Query: 468 APMLHIPGFTYPVRAYFLENILEMTRYRLNTY 499
A + + G + V Y+L ++ + +L+ +
Sbjct: 310 AYIFEVEGKPHSVEEYYLNDLEHIHHSKLSPH 341
Score = 41 (19.5 bits), Expect = 4.8e-23, Sum P(2) = 4.8e-23
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 726 LQSL---CLQIKSLQLGSISEFLSRALQPPEPLSVKNAIEYLQI 766
LQSL C Q+KS+ F+ + P E A+ Y+ I
Sbjct: 792 LQSLFRQCGQVKSIVFDGAKAFVEFSRNPTERFKTLPAV-YMAI 834
>ZFIN|ZDB-GENE-070410-11 [details] [associations]
symbol:zgc:158828 "zgc:158828" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-070410-11
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 OrthoDB:EOG4V9TQ5
EMBL:BC117646 IPI:IPI00851766 UniGene:Dr.86097 Uniprot:Q1ECW4
Length = 691
Score = 463 (168.0 bits), Expect = 1.9e-64, Sum P(2) = 1.9e-64
Identities = 128/443 (28%), Positives = 223/443 (50%)
Query: 556 PDSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQLQ--AHPL--LGDPSRVLL 611
PD + +E VL I + E G VL F+TG +++ + LQ A L G + +
Sbjct: 245 PDYVKAT-VETVL-KIHETEDDGDVLAFLTGQEEVEKVVSLLQEQARTLSRYGMKKHLCV 302
Query: 612 LACHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALN 671
L + + +EQ +F++ VRK+V+ATN+AETSITIN VVFVIDC K +Y+
Sbjct: 303 LPMYAGLPYNEQMRVFERMAPTVRKVVVATNIAETSITINGVVFVIDCAFVKIRAYNPRT 362
Query: 672 NTPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCL 731
L+ + ISK + G+C+ LY ++ + +PE+ R+ L + L
Sbjct: 363 AIESLIVTPISKASACQRAGRAGRNRAGKCFRLYTEEDFEKLPESTVPEMQRSNLAPVIL 422
Query: 732 QIKSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLT-VLGRNLSMLPVEP 790
Q+K+L + ++ F L PP S+ A+E L +G LD+ LT +G ++ P+ P
Sbjct: 423 QLKALGIDNVLRF--SFLSPPPAQSMVQALELLFALGGLDQYGRLTDPMGVRMAEFPLSP 480
Query: 791 KLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALV 850
KML+ F C ++T+ A + +++ F+ P +++ A +F+ + DHL ++
Sbjct: 481 MFAKMLLESGNFGCSKEIVTIAAMMQIQNIFVAPHNQRKSAAREHRKFAVAE-GDHLTML 539
Query: 851 RAYDGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWS 910
Y+ + +HQ ++C +FL+ + L ++R+Q LL + ++E
Sbjct: 540 NVYEAFI---KHQKSSQWCQDHFLNYKGLLRATAVREQLRHLLNKFKVPRTSSEG----- 591
Query: 911 HDEHLIRAVICAGLFPGLCSVVNKEKSIALKTMEDGQVL-LYSNSVNAGVPKIPYPWLVF 969
D +I I +G F + S + +T+ D + L ++ +SV G + P W+VF
Sbjct: 592 -DPDVILRCIVSGFF---ANAARMHHSGSYRTLRDDRELYIHPDSVLYG--EKPPKWVVF 645
Query: 970 NEKIKVNSVFLRDSTGVSDSVLL 992
NE ++ + ++RD T V S L+
Sbjct: 646 NEVVQTSKYYMRDVTAVESSWLV 668
Score = 264 (98.0 bits), Expect = 1.9e-64, Sum P(2) = 1.9e-64
Identities = 70/202 (34%), Positives = 103/202 (50%)
Query: 294 RRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQ 353
R+ LP +K R+ +L + Q VV+ GETG GK+TQ+PQY+LE+ AA G + TQ
Sbjct: 41 RQRLPVFKHRNNILYLVESFQTVVIVGETGSGKSTQIPQYLLEAGW-AAEGKVIGV--TQ 97
Query: 354 PRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKG-RDTRLMFCTTGIXXXXXXXXXXX 412
PRR++A +V+ RVA ERG LG VGY +R + TR+ F T G+
Sbjct: 98 PRRVAATSVATRVAEERGAFLGHEVGYTIRFDDCSDPHATRIKFLTDGMLVREMMSDPLL 157
Query: 413 XGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYF-----GG 467
+ +I+DE HER + D + + SATL+A+ F +F G
Sbjct: 158 KKYSVLILDEAHERTLYTDIAIGLLKKILKKRRDLRLIVASATLDAKKFQDFFNLNESGD 217
Query: 468 AP-----MLHIPGFTYPVRAYF 484
A +L + G T+PV ++
Sbjct: 218 ASKDTCGILTVEGRTFPVDIFY 239
>UNIPROTKB|Q9H5Z1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CH471077 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K13117 OMA:NIFVVPP
EMBL:AK026412 EMBL:AK025541 EMBL:AL023803 EMBL:BC132669
IPI:IPI00030288 RefSeq:NP_068750.2 UniGene:Hs.444520
ProteinModelPortal:Q9H5Z1 SMR:Q9H5Z1 IntAct:Q9H5Z1
PhosphoSite:Q9H5Z1 DMDM:20137971 PRIDE:Q9H5Z1 DNASU:60625
Ensembl:ENST00000252011 GeneID:60625 KEGG:hsa:60625 UCSC:uc002xjh.3
CTD:60625 GeneCards:GC20P037590 HGNC:HGNC:15861 neXtProt:NX_Q9H5Z1
PharmGKB:PA27222 InParanoid:Q9H5Z1 PhylomeDB:Q9H5Z1
GenomeRNAi:60625 NextBio:65461 ArrayExpress:Q9H5Z1 Bgee:Q9H5Z1
CleanEx:HS_DHX35 Genevestigator:Q9H5Z1 GermOnline:ENSG00000101452
Uniprot:Q9H5Z1
Length = 703
Score = 460 (167.0 bits), Expect = 3.1e-64, Sum P(2) = 3.1e-64
Identities = 121/442 (27%), Positives = 224/442 (50%)
Query: 556 PDSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQL--QAHPLL--GDPSRVLL 611
PD I + +E V+ I + E G VL F+TG +++ ++ L QA L G + +
Sbjct: 255 PDYIK-STVETVV-KIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGMKRHLRV 312
Query: 612 LACHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALN 671
L + + S EQ +F++ VRK+++ATN+AETSITI+ +V+VIDCG K +Y+
Sbjct: 313 LPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRT 372
Query: 672 NTPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCL 731
CL+ +S+ + G+CY LY +D +PE+ R+ L + L
Sbjct: 373 AIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDKLPQSTVPEMQRSNLAPVIL 432
Query: 732 QIKSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTV-LGRNLSMLPVEP 790
Q+K+L + ++ F + PP S+ A+E L +G LD++ LT LG ++ P+ P
Sbjct: 433 QLKALGIDNVLRF--HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNP 490
Query: 791 KLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALV 850
KML+ F C ++++ A + +++ F++P ++K A +F+ + DHL ++
Sbjct: 491 MFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPPNQKSHAIRVHRKFAVEE-GDHLTML 549
Query: 851 RAYDGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWS 910
Y+ + +H ++C ++FL+ + L ++R+Q LL + +++E
Sbjct: 550 NIYEAFI---KHNKDSKWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPRKSSEG----- 601
Query: 911 HDEHLIRAVICAGLFPGLCSVVNKEKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFN 970
D L+ I +G F + + A +T+ D L + + + + P W+++N
Sbjct: 602 -DPDLVLRCIVSGFF---ANAARFHSTGAYRTIRDDHEL-HIHPASVLYAEKPPRWVIYN 656
Query: 971 EKIKVNSVFLRDSTGVSDSVLL 992
E I+ + ++RD T + + LL
Sbjct: 657 EVIQTSKYYMRDVTAIESAWLL 678
Score = 267 (99.0 bits), Expect = 3.1e-64, Sum P(2) = 3.1e-64
Identities = 69/205 (33%), Positives = 105/205 (51%)
Query: 294 RRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQ 353
R+ LP +K R+ +L I Q VV+ GETGCGK+TQ+PQY+ E+ A G + TQ
Sbjct: 51 RQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGW-TAEGRVVGV--TQ 107
Query: 354 PRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGR-DTRLMFCTTGIXXXXXXXXXXX 412
PRR++A+ V+ RVA ERG LG VGY +R + + TR+ F T G+
Sbjct: 108 PRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPLL 167
Query: 413 XGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFG----GA 468
+ +++DE HER + D + + SATL+A+ F +F
Sbjct: 168 TKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNETSD 227
Query: 469 P------MLHIPGFTYPVRAYFLEN 487
P +L + G T+PV ++L++
Sbjct: 228 PARDTCVILTVEGRTFPVDIFYLQS 252
>UNIPROTKB|F1SDW0 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:CU442751
Ensembl:ENSSSCT00000008044 Uniprot:F1SDW0
Length = 719
Score = 460 (167.0 bits), Expect = 3.5e-64, Sum P(2) = 3.5e-64
Identities = 119/454 (26%), Positives = 229/454 (50%)
Query: 556 PDSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQL--QAHPL--LGDPSRVLL 611
PD I + +E V+ I + E G +L F+TG +++ ++ L QA L G + +
Sbjct: 255 PDYIK-STVETVM-KIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGRTGMKRHLRV 312
Query: 612 LACHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALN 671
L + + S EQ +F++ VRK+++ATN+AETSITI+ +V+VIDCG K +Y+
Sbjct: 313 LPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRT 372
Query: 672 NTPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCL 731
CL+ +S+ + G+CY LY +D +PE+ R+ L + L
Sbjct: 373 AIECLVVVPVSQASANQRAGRAGRSRSGKCYRLYTEDAFDQLPQSTVPEMQRSNLAPVIL 432
Query: 732 QIKSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTV-LGRNLSMLPVEP 790
Q+K+L + ++ F + PP S+ A+E L +G LD++ LT LG ++ P+ P
Sbjct: 433 QLKALGIDNVLRF--HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNP 490
Query: 791 KLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALV 850
KML+ F C ++++ A + +++ F++P ++K A +F+ + DHL ++
Sbjct: 491 MFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPSNQKSQAIRVHRKFAVEE-GDHLTML 549
Query: 851 RAYDGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWS 910
Y+ + +H ++C ++FL+ + L ++R+Q LL + +++E
Sbjct: 550 NVYEAFI---KHNKNSQWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPKKSSEG----- 601
Query: 911 HDEHLIRAVICAGLFPGLCSVVNKEKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFN 970
+ ++R ++ +G F + + +T+ D L + + + + P W+++N
Sbjct: 602 DPDPVLRCIV-SGFF---ANAARFHSTGVYRTIRDDHEL-HIHPASVLYAEKPPRWVIYN 656
Query: 971 EKIKVNSVFLRDSTGVSDSVLLLFGGNISRGGLV 1004
E I+ + ++RD T + + LL + + G V
Sbjct: 657 EVIQTSKYYMRDVTAIESAWLLELAPHFYQQGTV 690
Score = 268 (99.4 bits), Expect = 3.5e-64, Sum P(2) = 3.5e-64
Identities = 70/205 (34%), Positives = 104/205 (50%)
Query: 294 RRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQ 353
R+ LP +K R+ +L I Q VV+ GETGCGK+TQ+PQY+ E+ A G + TQ
Sbjct: 51 RQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGW-TAEGRVVGV--TQ 107
Query: 354 PRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGR-DTRLMFCTTGIXXXXXXXXXXX 412
PRR++A+ V+ RVA ERG LG VGY +R + TR+ F T G+
Sbjct: 108 PRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPLL 167
Query: 413 XGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFG-----G 467
+ +++DE HER + D + + SATL+AE F +F
Sbjct: 168 TKYSAIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNDTSD 227
Query: 468 AP-----MLHIPGFTYPVRAYFLEN 487
P +L + G T+PV ++L++
Sbjct: 228 PPRDTCVILTVEGRTFPVDIFYLQS 252
Score = 37 (18.1 bits), Expect = 3.8e-18, Sum P(2) = 3.8e-18
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 494 YRLNTYNQIDDYGQEKSWKMQKQALA 519
YRL T + D Q +MQ+ LA
Sbjct: 403 YRLYTEDAFDQLPQSTVPEMQRSNLA 428
>UNIPROTKB|F1S9V4 [details] [associations]
symbol:TDRD9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071547 "piP-body" evidence=IEA] [GO:0043046 "DNA
methylation involved in gamete generation" evidence=IEA]
[GO:0034587 "piRNA metabolic process" evidence=IEA] [GO:0009566
"fertilization" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0007140 "male meiosis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
InterPro:IPR002999 GO:GO:0005524 GO:GO:0005634 GO:GO:0009566
GO:GO:0007283 GO:GO:0003676 GO:GO:0007140 Pfam:PF00567
SMART:SM00333 PROSITE:PS50304 GO:GO:0043046 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0034587
GeneTree:ENSGT00700000104393 GO:GO:0008026 GO:GO:0071547
OMA:INDWFTI EMBL:CU693433 Ensembl:ENSSSCT00000002836
ArrayExpress:F1S9V4 Uniprot:F1S9V4
Length = 1333
Score = 433 (157.5 bits), Expect = 7.0e-64, Sum P(2) = 7.0e-64
Identities = 124/393 (31%), Positives = 194/393 (49%)
Query: 575 ERPGAVLVFMTGWDDINSLKDQLQAHPLLGDP--SRVLLLACHGSMASSEQRLIFDKPED 632
ER +VLVF+ G +IN + H LL + R+ + H S+ EQ +F P
Sbjct: 391 ER-SSVLVFLPGLGEINCM------HELLTNMVHKRLQVYPLHSSVTLEEQNNVFLSPVP 443
Query: 633 GVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXX-XXXXXX 691
G RK++L+TN+AE+S+T+ DV +VID + D N L SW SK
Sbjct: 444 GYRKVILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKEG 503
Query: 692 XXXXVQPGECYHLYPRYVYD-AFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQ 750
V G CY L P+ +D + D+ +PE+LR PL S L++K L +G L+ AL
Sbjct: 504 RAGRVSKGYCYRLVPKDFWDTSIPDHVIPEMLRCPLGSTILKLKLLDMGEPRALLATALS 563
Query: 751 PPEPLSVKNAIEYLQIIGAL-------DENEN---LTVLGRNLSMLPVEPKLGKMLILGA 800
PP ++ I L+ +GAL DEN + LT LGR L+ LPV +LGK+++LG
Sbjct: 564 PPSLGDIERTILLLKEVGALAVRGPRDDENPHDGELTFLGRVLAHLPVNQQLGKLIVLGH 623
Query: 801 IFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAE 860
+F CLD + + A LS+++ F MPF + +K FS SD +ALV A+ W+
Sbjct: 624 VFGCLDECLIIAASLSLKNFFAMPFRQHLDGYRSKMNFSGSSKSDCIALVEAFKAWQTCR 683
Query: 861 -----RHQSGYEYCWK--NFLSAQTLKAIDSLRKQFLFLLKDAGL-VD-RNTENCNKWSH 911
RH E W N++ + ++ + L ++ + + D R ++ H
Sbjct: 684 QRGELRHPKD-ELDWGRLNYIQIKRIREVAELYEELKSRVSQFNMHADCRRPVLDREYPH 742
Query: 912 DEHLIRAVICAGLF-PGLCSVVNKEKSIALKTM 943
+ I V+ AG F P + ++ +A++ +
Sbjct: 743 KQRFILQVVLAGAFYPNYFTFGQPDEEVAVREL 775
Score = 310 (114.2 bits), Expect = 7.0e-64, Sum P(2) = 7.0e-64
Identities = 71/212 (33%), Positives = 112/212 (52%)
Query: 297 LPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRR 356
LP + ++ ++ I N VV++ G TG GK+TQLPQYIL+ + R C+I+ TQPR+
Sbjct: 139 LPINRCKEEVISLIESNSVVIIHGATGSGKSTQLPQYILDRSVQ--RSTYCNIVVTQPRK 196
Query: 357 ISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXGVT 416
I A +++ ++ ER LG VGY+V LE + DT+L++ TTG+ T
Sbjct: 197 IGASSIARWISKERAWTLGGLVGYQVGLEKIATEDTKLIYMTTGVLLQKIVSAKSLMEFT 256
Query: 417 HVIVDEIHERGMNEDFLL-IVXXXXXXXXXXXXXXXMSATLNAELFSSYFG--------G 467
H+ +DE+HER DFLL +V MSAT++ + F+ YF
Sbjct: 257 HIFIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVVLMSATISCKEFADYFAVPVQNELNP 316
Query: 468 APMLHIPGFTYPVRAYFLENILEMTRYRLNTY 499
A + + G Y V +L+++ + R RL+ +
Sbjct: 317 ACVYEVEGEPYAVEECYLDDLEHLHRGRLSPH 348
Score = 43 (20.2 bits), Expect = 2.0e-22, Sum P(2) = 2.0e-22
Identities = 6/20 (30%), Positives = 16/20 (80%)
Query: 625 LIFDKPEDGVRKIVLATNMA 644
++ D PEDG +++++A +++
Sbjct: 1191 IVSDAPEDGHQRMLVAASLS 1210
Score = 39 (18.8 bits), Expect = 5.2e-22, Sum P(2) = 5.2e-22
Identities = 9/24 (37%), Positives = 10/24 (41%)
Query: 654 VFVIDCGKAKETSYDALNNTPCLL 677
VF +D G D L PC L
Sbjct: 986 VFFVDYGNRALVPLDLLMEMPCQL 1009
>DICTYBASE|DDB_G0270110 [details] [associations]
symbol:dhx33 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0270110 GO:GO:0005524 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14781 RefSeq:XP_646548.1
EnsemblProtists:DDB0233404 GeneID:8617514 KEGG:ddi:DDB_G0270110
InParanoid:Q55CD3 OMA:EICINRE Uniprot:Q55CD3
Length = 730
Score = 381 (139.2 bits), Expect = 9.3e-64, Sum P(2) = 9.3e-64
Identities = 96/332 (28%), Positives = 173/332 (52%)
Query: 564 IEHVLCHIVKKERP---GAVLVFMTGWDDINSL-KDQLQAHPLLGDPSRVLLLACHGSMA 619
I H+ + KE G +LVF+TG D+I +L K L P L S+ L++ S
Sbjct: 280 IAHLTDKSINKEEEEDGGDILVFLTGRDEIENLEKLLLDRIPRLPVGSKDLIVCPIFSAL 339
Query: 620 SSEQRL-IFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLP 678
EQ++ +F+K G RK++LATN+AETS+TIN + +V+D G K ++ L
Sbjct: 340 PQEQQMKVFEKAPKGSRKVILATNIAETSLTINGIRYVVDSGAVKSKIFNPKIGIDSLNI 399
Query: 679 SWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQL 738
ISK G+CY LY + ++ +PE+ R+ + ++ LQ+K++ +
Sbjct: 400 IPISKASAKQRTGRAGREFEGKCYRLYTQETFEKLDTSSIPEIKRSNIANVILQLKTIGI 459
Query: 739 GSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLIL 798
I F L+ P SV ++E L + A+ +N +LT LG+ +++ P++P K LI
Sbjct: 460 NDILSF--DFLESPPVASVIKSLELLFCLDAISDNGSLTELGKKMALFPLDPMYSKTLIK 517
Query: 799 GAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKD 858
F C + V+ +++ LSV F P +KK E K F + D DH+ + + ++
Sbjct: 518 SIEFECSEEVLIIISILSVESIFFTPKEKKKEVEDVKKIFFSPD-GDHITFLNVFREFQK 576
Query: 859 AERHQSGYEYCWKNFLSAQTLKAIDSLRKQFL 890
++ Q ++C+ +F++ +++ + ++ +Q +
Sbjct: 577 SKPQQQ-QQWCFDHFINLKSMIKVLNVFEQLV 607
Score = 352 (129.0 bits), Expect = 9.3e-64, Sum P(2) = 9.3e-64
Identities = 87/251 (34%), Positives = 138/251 (54%)
Query: 242 STTNDEGLYEQQEQLVQ-NSVVRERILRQRSLQMHEKQQAWQESPEGQKMLEFRRSLPSY 300
S +++G +E +++ VQ + ++I +L+ + + +E P+ K+ + SLP +
Sbjct: 21 SIHSNKGKFELKKKPVQLQQISNDKINDNNNLK--NQLEIPKEIPKEIKLQ--KESLPVF 76
Query: 301 KERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRRISAM 360
+DALLK E+ V++ ETG GKTTQ+PQY+ E+ + G I TQPRR++A+
Sbjct: 77 TAKDALLKNFKEHSTVIIISETGTGKTTQIPQYLYENGYKD-NGI---IAITQPRRVAAV 132
Query: 361 AVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIV 420
++S+RV+ E G +LG+ VGY VR + T+L + T G+ + +I+
Sbjct: 133 SISKRVSQEMGVELGDQVGYCVRFDDKTNEKTKLKYMTDGMLVREAMLDSSLSKYSVIIL 192
Query: 421 DEIHERGMNEDFLLIVXXXXXXXXXXXX---XXXMSATLNAELFSSYFGGAPMLHIPGFT 477
DE HER +N D L + MSATL+AELFS YF AP+L+I G
Sbjct: 193 DEAHERTLNTDVLFGLLKSIQKRREKKNPLKIIIMSATLDAELFSQYFNNAPVLYIEGRQ 252
Query: 478 YPVRAYFLENI 488
+PV+ Y+ E I
Sbjct: 253 FPVQIYYTEEI 263
>ZFIN|ZDB-GENE-090313-193 [details] [associations]
symbol:tdrd9 "tudor domain containing 9"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0043046 "DNA methylation
involved in gamete generation" evidence=ISS] [GO:0071547 "piP-body"
evidence=ISS] [GO:0007140 "male meiosis" evidence=ISS] [GO:0009566
"fertilization" evidence=ISS] [GO:0007283 "spermatogenesis"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0034587 "piRNA metabolic process" evidence=ISS] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0007126 "meiosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0031047 "gene silencing by RNA" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 InterPro:IPR002999 ZFIN:ZDB-GENE-090313-193
GO:GO:0005524 GO:GO:0003676 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 GO:GO:0008026 EMBL:BX072537
IPI:IPI00488074 Ensembl:ENSDART00000124958 Bgee:F1RA66
Uniprot:F1RA66
Length = 1344
Score = 409 (149.0 bits), Expect = 1.2e-63, Sum P(2) = 1.2e-63
Identities = 101/291 (34%), Positives = 156/291 (53%)
Query: 575 ERPGAVLVFMTGWDDINSLKDQLQAHPLLGDPSRVLLLACHGSMASSEQRLIFDKPEDGV 634
ER G+VLVF+ G +I +K+ L L+ R+ + H ++ EQ +F P G
Sbjct: 345 ER-GSVLVFLPGLAEIQYMKEALSK--LVR--KRLQVYPLHSTVTLEEQNGVFLVPVPGY 399
Query: 635 RKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXX 694
RKI+L+TN+AE+S+T+ DV +VID ++ + D N CL +W SK
Sbjct: 400 RKIILSTNIAESSVTVPDVKYVIDFCLVRQLACDKETNYRCLRITWASKTSCNQRRGRAG 459
Query: 695 XVQPGECYHLYPRYVYD-AFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPE 753
V G CY L R+ ++ ++ +PE+LR+PL S L++K L +G LS AL PP
Sbjct: 460 RVSKGFCYRLVTRHFWENEIPNFSIPEMLRSPLASTLLKVKLLDMGDPRSVLSTALTPPI 519
Query: 754 PLSVKNAIEYLQIIGALDENEN--------LTVLGRNLSMLPVEPKLGKMLILGAIFNCL 805
++ + L+ IGAL N LT LGR L+ LPV+ +LGK+++LG +F CL
Sbjct: 520 LGDIERTVLQLKQIGALSVQSNSQRQFDGDLTFLGRVLAQLPVDLQLGKLIVLGHVFGCL 579
Query: 806 DPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGW 856
+ + + A LS++ F MP ++ +K F+ SD +A V A+ W
Sbjct: 580 EECLIIAASLSLKSFFAMPSLQQLAGYRSKLSFAQNVPSDFIAYVNAFKAW 630
Score = 333 (122.3 bits), Expect = 1.2e-63, Sum P(2) = 1.2e-63
Identities = 95/273 (34%), Positives = 137/273 (50%)
Query: 297 LPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRR 356
LP K R L+ I N VV++ G TG GKTTQLPQ+IL+ E R C+++ TQPR+
Sbjct: 89 LPITKNRQELVSLIENNSVVIIRGATGSGKTTQLPQFILDHYAE--RNIPCNLVVTQPRK 146
Query: 357 ISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXGVT 416
I A +++ VA ER LG VGY+V LE M T+L++ TTG+ +
Sbjct: 147 IGATSIARWVARERKCTLGSLVGYQVGLEKMATEHTKLIYVTTGVLLQKLVSSKTLTEYS 206
Query: 417 HVIVDEIHERGMNEDFLL-IVXXXXXXXXXXXXXXXMSATLNAELFSSYFGG-------- 467
H+ +DE+HER DFLL +V MSAT+N F+ YFG
Sbjct: 207 HIFIDEVHERSEELDFLLLVVRKLLRSNSRYVKVILMSATINCIEFAEYFGSPIRNQMNP 266
Query: 468 APMLHIPGFTYPVRAYFLENILEMTRYRLN---TYNQIDDYGQEKSWKMQKQALALRKRK 524
A + + G Y V Y+L+ + M +N T Q D Y E+ + + A++L
Sbjct: 267 AYVFEVEGAPYAVEEYYLDELKTMLPVGVNLDLTLPQ-DPYITEEMYNV---AVSL---- 318
Query: 525 SSIASAVEDALEAADFREYSVQTQQSLSCWNPD 557
I S D +EA D R S +++Q+ S +P+
Sbjct: 319 --IQSF--DEMEAKDHR--SRRSEQTGSTTHPE 345
Score = 172 (65.6 bits), Expect = 2.0e-38, Sum P(2) = 2.0e-38
Identities = 49/178 (27%), Positives = 89/178 (50%)
Query: 775 NLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESA 834
+LT LGR L+ LPV+ +LGK+++LG +F CL+ + + A LS++ F MP ++ +
Sbjct: 549 DLTFLGRVLAQLPVDLQLGKLIVLGHVFGCLEECLIIAASLSLKSFFAMPSLQQLAGYRS 608
Query: 835 KAQFSARDYSDHLALVRAYDGW-----KDAERH-QSGYEYCWKNFLSAQTLKAIDSLRKQ 888
K F+ SD +A V A+ W K RH + E+ +N + + ++ + L +
Sbjct: 609 KLSFAQNVPSDFIAYVNAFKAWYTSRAKGELRHPKDELEWGKENCIQIKRIREVAELFED 668
Query: 889 FLFLLKDAGLVDRNTENCNKWS--HDEHLIRAVICAG-LFPGLCSVVNKEKSIALKTM 943
+ + ++ N ++ H + I V+ AG LFP S ++ +A K +
Sbjct: 669 LKKRVSRFNMHISSSSNPTDYTSLHKQRFILQVVIAGALFPNYFSQGEIDEQLASKEL 726
Score = 37 (18.1 bits), Expect = 2.8e-24, Sum P(2) = 2.8e-24
Identities = 26/98 (26%), Positives = 37/98 (37%)
Query: 534 ALEAADFREYSVQTQQSLSCWNPDSIGFNLIEHV---LCHIVKKERPGAVLVFMTGWDDI 590
AL D R SV +L C P G + ++ + HI+ V VF + +
Sbjct: 891 ALNMRDLRPLSVSLYPNLLCVAPFKDGQQMAKYYRAKVLHILGSN----VEVFFVDFGNT 946
Query: 591 NSL-KDQLQAHPL-LGDPSRVLLLACHGSMASSEQRLI 626
+ L+ P L P+ C MA S Q LI
Sbjct: 947 TVVPSSSLRELPSDLMTPAFQAQEFCIARMAPSAQSLI 984
>GENEDB_PFALCIPARUM|MAL13P1.322 [details] [associations]
symbol:MAL13P1.322 "splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 399 (145.5 bits), Expect = 1.6e-63, Sum P(4) = 1.6e-63
Identities = 108/383 (28%), Positives = 187/383 (48%)
Query: 615 HGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTP 674
+ ++S +Q IF K + +RKI+++TN+AETS+T++ + +VID G K Y+
Sbjct: 778 YSQLSSEQQSKIFKKYD--LRKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQTIGMD 835
Query: 675 CLLPSWISKXXXXXXXXXXXXVQPGECYHLYPR--YVYDAFADYQLPELLRTPLQSLCLQ 732
L + IS+ G CY LY ++ D + + +PE+ R+ L ++ L
Sbjct: 836 VLQVTPISQANANQRSGRAGRTGAGICYRLYTENTFLCDLYQN-NIPEIQRSNLSNVVLL 894
Query: 733 IKSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKL 792
+KSL + ++ EF + P S+ N++ L ++GA++ NLT +GR + P++P L
Sbjct: 895 LKSLHVQNLFEF--DFIDVPSKESIINSLHELWVLGAINNEGNLTDIGRKMVQFPLDPPL 952
Query: 793 GKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRA 852
K++I F C ++ +V+ LS FL + + ES K +F+ + SDHL L+
Sbjct: 953 SKIVIYSQNFQCTKEILIIVSMLSSPSIFLESKENNESIESKKEKFTVPE-SDHLTLLNI 1011
Query: 853 YDGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHD 912
Y W+ H Y +C KNF+ + L + Q + ++K + +N NKW
Sbjct: 1012 YLQWRS---HNYSYSWCTKNFIQYKALNKAKEVYSQLIDIIKTLNI--KNVSCDNKWE-- 1064
Query: 913 EHLIRAVICAGLFPGLCSVVNKEKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFNEK 972
LIR IC+G F + + + I L+T V S+ N G P ++++ E
Sbjct: 1065 --LIRKTICSGYFHNAAKLKSFSEYINLRTNVSCHVHPNSSLYNIGYT--P-DYVIYQEI 1119
Query: 973 IKVNSVFLRDSTGVSDSVLLLFG 995
+ ++R+ T V L G
Sbjct: 1120 VFTTKEYMRNVTTVDPEWLCELG 1142
Score = 341 (125.1 bits), Expect = 1.6e-63, Sum P(4) = 1.6e-63
Identities = 81/259 (31%), Positives = 134/259 (51%)
Query: 227 QKYINASMSSLSNVGSTTNDEGLYEQQEQLVQNSVVRERILRQRSLQMHEKQQAWQESPE 286
+ Y N S +S N N +++ ++ + +S+ + + +K+ ++ E
Sbjct: 418 EDYDNISYNSSENNKEDDNGSDVFDYKKDKIYSSLFN---IENNN---KDKKNTLKDKEE 471
Query: 287 GQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAA 346
+L+ + SLP YK + LL A+ N ++++ GETG GKTTQ+ QY+ E E G
Sbjct: 472 ---LLKLKESLPIYKSKHELLDAVYNNNIIIIVGETGSGKTTQIVQYLYE-EGYHRNGII 527
Query: 347 CSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXX 406
C CTQPRR++A++V+ RV+ E +G VGY +R E +DT++ + T GI
Sbjct: 528 C---CTQPRRVAAVSVAYRVSYEMNVDIGSLVGYTIRFEDNTTKDTKIRYVTDGILLRET 584
Query: 407 XXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFG 466
+ +I+DE HER +N D LL + SAT++A+ FS++FG
Sbjct: 585 LNDKELDKYSVIIMDEAHERSINTDVLLGILKNICLKRNDLKLIVTSATIDAKKFSAFFG 644
Query: 467 GAPMLHIPGFTYPVRAYFL 485
AP+ +I G T+ V +L
Sbjct: 645 NAPIYNIQGRTFKVHIEYL 663
Score = 53 (23.7 bits), Expect = 1.6e-63, Sum P(4) = 1.6e-63
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 578 GAVLVFMTGWDDINS 592
G +L+FMTG +DIN+
Sbjct: 693 GDILIFMTGQEDINA 707
Score = 39 (18.8 bits), Expect = 1.6e-63, Sum P(4) = 1.6e-63
Identities = 16/67 (23%), Positives = 27/67 (40%)
Query: 104 YAYQDESSDDSDREFGSTQQQMCGSTLDN---IDEWRWKLTMLLRNKDEQEVVSRAKKDR 160
Y Y+D SSD + + Q + N ++ R K+ + + +V S K
Sbjct: 6 YVYRDSSSDGNKKNNDKIQTGFLYNEKKNEKTLEFKRRKVNKINKKLTTDDVKSNIFKKI 65
Query: 161 RDFEQLS 167
FE+ S
Sbjct: 66 DTFEEAS 72
>UNIPROTKB|C0H5K5 [details] [associations]
symbol:MAL13P1.322 "Splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 399 (145.5 bits), Expect = 1.6e-63, Sum P(4) = 1.6e-63
Identities = 108/383 (28%), Positives = 187/383 (48%)
Query: 615 HGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTP 674
+ ++S +Q IF K + +RKI+++TN+AETS+T++ + +VID G K Y+
Sbjct: 778 YSQLSSEQQSKIFKKYD--LRKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQTIGMD 835
Query: 675 CLLPSWISKXXXXXXXXXXXXVQPGECYHLYPR--YVYDAFADYQLPELLRTPLQSLCLQ 732
L + IS+ G CY LY ++ D + + +PE+ R+ L ++ L
Sbjct: 836 VLQVTPISQANANQRSGRAGRTGAGICYRLYTENTFLCDLYQN-NIPEIQRSNLSNVVLL 894
Query: 733 IKSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKL 792
+KSL + ++ EF + P S+ N++ L ++GA++ NLT +GR + P++P L
Sbjct: 895 LKSLHVQNLFEF--DFIDVPSKESIINSLHELWVLGAINNEGNLTDIGRKMVQFPLDPPL 952
Query: 793 GKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRA 852
K++I F C ++ +V+ LS FL + + ES K +F+ + SDHL L+
Sbjct: 953 SKIVIYSQNFQCTKEILIIVSMLSSPSIFLESKENNESIESKKEKFTVPE-SDHLTLLNI 1011
Query: 853 YDGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHD 912
Y W+ H Y +C KNF+ + L + Q + ++K + +N NKW
Sbjct: 1012 YLQWRS---HNYSYSWCTKNFIQYKALNKAKEVYSQLIDIIKTLNI--KNVSCDNKWE-- 1064
Query: 913 EHLIRAVICAGLFPGLCSVVNKEKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFNEK 972
LIR IC+G F + + + I L+T V S+ N G P ++++ E
Sbjct: 1065 --LIRKTICSGYFHNAAKLKSFSEYINLRTNVSCHVHPNSSLYNIGYT--P-DYVIYQEI 1119
Query: 973 IKVNSVFLRDSTGVSDSVLLLFG 995
+ ++R+ T V L G
Sbjct: 1120 VFTTKEYMRNVTTVDPEWLCELG 1142
Score = 341 (125.1 bits), Expect = 1.6e-63, Sum P(4) = 1.6e-63
Identities = 81/259 (31%), Positives = 134/259 (51%)
Query: 227 QKYINASMSSLSNVGSTTNDEGLYEQQEQLVQNSVVRERILRQRSLQMHEKQQAWQESPE 286
+ Y N S +S N N +++ ++ + +S+ + + +K+ ++ E
Sbjct: 418 EDYDNISYNSSENNKEDDNGSDVFDYKKDKIYSSLFN---IENNN---KDKKNTLKDKEE 471
Query: 287 GQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAA 346
+L+ + SLP YK + LL A+ N ++++ GETG GKTTQ+ QY+ E E G
Sbjct: 472 ---LLKLKESLPIYKSKHELLDAVYNNNIIIIVGETGSGKTTQIVQYLYE-EGYHRNGII 527
Query: 347 CSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXX 406
C CTQPRR++A++V+ RV+ E +G VGY +R E +DT++ + T GI
Sbjct: 528 C---CTQPRRVAAVSVAYRVSYEMNVDIGSLVGYTIRFEDNTTKDTKIRYVTDGILLRET 584
Query: 407 XXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFG 466
+ +I+DE HER +N D LL + SAT++A+ FS++FG
Sbjct: 585 LNDKELDKYSVIIMDEAHERSINTDVLLGILKNICLKRNDLKLIVTSATIDAKKFSAFFG 644
Query: 467 GAPMLHIPGFTYPVRAYFL 485
AP+ +I G T+ V +L
Sbjct: 645 NAPIYNIQGRTFKVHIEYL 663
Score = 53 (23.7 bits), Expect = 1.6e-63, Sum P(4) = 1.6e-63
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 578 GAVLVFMTGWDDINS 592
G +L+FMTG +DIN+
Sbjct: 693 GDILIFMTGQEDINA 707
Score = 39 (18.8 bits), Expect = 1.6e-63, Sum P(4) = 1.6e-63
Identities = 16/67 (23%), Positives = 27/67 (40%)
Query: 104 YAYQDESSDDSDREFGSTQQQMCGSTLDN---IDEWRWKLTMLLRNKDEQEVVSRAKKDR 160
Y Y+D SSD + + Q + N ++ R K+ + + +V S K
Sbjct: 6 YVYRDSSSDGNKKNNDKIQTGFLYNEKKNEKTLEFKRRKVNKINKKLTTDDVKSNIFKKI 65
Query: 161 RDFEQLS 167
FE+ S
Sbjct: 66 DTFEEAS 72
>DICTYBASE|DDB_G0285843 [details] [associations]
symbol:helD "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0285843 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000082 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
KO:K12815 RefSeq:XP_638016.1 EnsemblProtists:DDB0191460
GeneID:8625367 KEGG:ddi:DDB_G0285843 InParanoid:Q54MH4
ProtClustDB:CLSZ2846702 Uniprot:Q54MH4
Length = 1387
Score = 430 (156.4 bits), Expect = 2.3e-63, Sum P(3) = 2.3e-63
Identities = 115/423 (27%), Positives = 212/423 (50%)
Query: 578 GAVLVFMTGWDDINSLKDQLQAH-PLLGDPSRVL-LLACHGSMASSEQRLIFDKPEDGVR 635
G +LVFMTG +DI + ++ LG + L LL + + S Q IF+K ++G R
Sbjct: 868 GDILVFMTGQEDIETTCATVEERIKQLGPQAPPLTLLPIYSQLPSDMQAKIFEKADNGSR 927
Query: 636 KIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXXX 695
K ++ATN+AETS+T++ +++VID G K Y+ L + ISK
Sbjct: 928 KCIIATNIAETSLTVDGILYVIDTGYCKLKVYNPRVGMDSLQVTPISKANANQRSGRAGR 987
Query: 696 VQPGECYHLYPRYVYD-AFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPEP 754
PG CY LY + D +PE+ RT L ++ L +KS+ + ++ +F + PP
Sbjct: 988 TGPGRCYRLYTESAFKYELMDNNIPEIQRTNLGNVVLNLKSMGVKNLLDF--DFMDPPPQ 1045
Query: 755 LSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAG 814
++ N++ L ++GALD+ +T LG+ +S P++P L KM+I+ C ++T+V+
Sbjct: 1046 DNILNSMYQLWVLGALDDQGQITPLGKRMSEFPLDPPLSKMVIVAEQLGCGQDIVTIVSM 1105
Query: 815 LSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYEYCWKNFL 874
LS+ F P ++ +++++ +F + SDHL L+ Y WK + S ++C ++++
Sbjct: 1106 LSMPSVFYRPKGAEEESDASREKFFVPE-SDHLTLLHVYQQWK-INNYSS--QWCAEHYI 1161
Query: 875 SAQTLKAIDSLRKQFLFLLKDAGLVDRNTENC-NKWSHDEHLIRAVICAGLFPGLCSVVN 933
+ ++ + +R Q L ++ D E+C + W +IR I + F +
Sbjct: 1162 HIKAMRKVREVRGQLLDIMVQH---DMKVESCGSNWD----IIRKAITSSYFHHSAKIKG 1214
Query: 934 KEKSIALKTMEDGQ-VLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVSDSVLL 992
+ + M +G L+ S G+ P ++V++E + + +++ T V + L
Sbjct: 1215 IGEYV---NMRNGMPCFLHPTSALYGLGYAP-DYIVYHELVMTSKEYMQIVTAVDPNWLA 1270
Query: 993 LFG 995
G
Sbjct: 1271 EMG 1273
Score = 316 (116.3 bits), Expect = 2.3e-63, Sum P(3) = 2.3e-63
Identities = 71/189 (37%), Positives = 103/189 (54%)
Query: 292 EFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIIC 351
E R LP + R+ L+K I EN V+++ GETG GKTTQL QY+ E + + G I C
Sbjct: 654 EQREFLPIFGCRNDLMKIIRENNVIIIVGETGSGKTTQLVQYLYE-DGYSKFG---KIGC 709
Query: 352 TQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXX 411
TQPRR++A++V++RV+ E LG VGY +R E +T + + T GI
Sbjct: 710 TQPRRVAAVSVAKRVSEEMSVTLGNEVGYSIRFEDCTSNETAIKYMTDGILLRESFNDPN 769
Query: 412 XXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPML 471
+ +I+DE HER +N D L + SAT++++ FS +FG P+
Sbjct: 770 LDKYSAIIMDEAHERSLNTDVLFGILKKVMSRRYDMKLIVTSATMDSKKFSMFFGDVPVF 829
Query: 472 HIPGFTYPV 480
IPG T+PV
Sbjct: 830 TIPGRTFPV 838
Score = 44 (20.5 bits), Expect = 1.6e-35, Sum P(2) = 1.6e-35
Identities = 12/53 (22%), Positives = 23/53 (43%)
Query: 142 MLLRNKDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNY 194
++ R D + +V+ A D + F + R + V++SK P +Y
Sbjct: 798 VMSRRYDMKLIVTSATMDSKKFSMFFGDVPVFTIPGRTFPVDVLWSKTPCEDY 850
Score = 42 (19.8 bits), Expect = 2.3e-63, Sum P(3) = 2.3e-63
Identities = 19/78 (24%), Positives = 36/78 (46%)
Query: 90 SYPLLEQQTSNYGRYAYQDESSDDSDREFGSTQQQMCGSTLDNIDEWRW--KLTMLLRNK 147
SY + ++SN Y D SS+ D + GS+ + D++R K + N+
Sbjct: 211 SYDRRDDRSSNRDDYRRDDRSSNRDDYR----RDDRSGSS-NRRDDYRRDDKSSSSSSNR 265
Query: 148 DEQEVVSRAKKDRRDFEQ 165
D+ R+ +R D+++
Sbjct: 266 DDYRRDDRSS-NREDYKR 282
>FB|FBgn0031631 [details] [associations]
symbol:CG3225 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0016779 GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP
EMBL:AY069418 RefSeq:NP_608860.1 UniGene:Dm.300 SMR:Q9VR29
DIP:DIP-18193N IntAct:Q9VR29 MINT:MINT-288733
EnsemblMetazoa:FBtr0077416 GeneID:33680 KEGG:dme:Dmel_CG3225
UCSC:CG3225-RA FlyBase:FBgn0031631 InParanoid:Q9VR29
OrthoDB:EOG4H189P GenomeRNAi:33680 NextBio:784751 Uniprot:Q9VR29
Length = 678
Score = 438 (159.2 bits), Expect = 2.3e-63, Sum P(2) = 2.3e-63
Identities = 125/413 (30%), Positives = 208/413 (50%)
Query: 573 KKERPGAVLVFMTGWDDINSLKDQLQAHPLLGDPSRVLLLACHGSMASSEQRLIFDKPED 632
+KE PG +L F+TG +++ D L+ + + + +L +GSM+S++Q +F P
Sbjct: 257 QKEPPGDILAFLTGQEEVLEALDLLREYIASSEQENLKVLPMYGSMSSTDQLSVFFTPPK 316
Query: 633 GVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXX 692
G RK+VLATN+AETSITI +V+VIDCG K Y+ + L+ +SK
Sbjct: 317 GTRKVVLATNIAETSITIPGIVYVIDCGYVKVKWYNPKTCSDSLVIVPVSKASAIQRAGR 376
Query: 693 XXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPP 752
++PG+ Y LY + Y+A A Q PE+ R+ L LQ+K+L +G+I F + PP
Sbjct: 377 AGRMRPGKVYRLYTKSDYEALAPRQPPEMRRSELSGAILQLKALGIGNILRFDFPS--PP 434
Query: 753 EPLSVKNAIEYLQIIGALDENENLTV-LGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTV 811
++ +A+E L + A+DE NLT +G L+ LP L KML + C + ++T+
Sbjct: 435 PAQNLLSALESLFALDAIDEQGNLTKPVGYLLAELPFSAMLSKMLYVSGQMGCSEEIITI 494
Query: 812 VAGLSVRDPFLMPFDK--KDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYEYC 869
+A L V+ F P + A +F + D + ++ AY G+ + + E+C
Sbjct: 495 IALLQVQSIFSRPASAVAQQSGRIAHRKFEVAE-GDFITMLNAYTGFVEEGMTK---EFC 550
Query: 870 WKNFLSAQTLKAIDSLRKQFLFLL-KDAGLVDRNTENCNKWSHDEHLIRAVICAGLFPGL 928
+ FL + LK SLR+Q + + K G+ +C E L + I AG F
Sbjct: 551 GQYFLIYRNLKRAHSLREQLITVARKKYGIP---IFSCK--GDVEKLCKC-ITAGFFT-- 602
Query: 929 CSVVNKEKSIALKTMEDG-QVLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFL 980
V S + + G ++ ++ NS +P+ Y +V+ E ++ +F+
Sbjct: 603 -QVAYLHHSGVYRQISSGTELAIHPNSTLYTLPQAQY--VVYGELLQTTKLFM 652
Score = 282 (104.3 bits), Expect = 2.3e-63, Sum P(2) = 2.3e-63
Identities = 89/269 (33%), Positives = 130/269 (48%)
Query: 290 MLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSI 349
++E R LP + RD +L + ++QVV++ GETG GK+TQ+PQY+ E +G I
Sbjct: 40 LMEQRERLPIRQYRDQILYCLEKHQVVILVGETGSGKSTQVPQYLYEWGWHT-KGL---I 95
Query: 350 ICTQPRRISAMAVSERVAAERGEKLGESVGYKVR-LEGMKGRDTRLMFCTTGIXXXXXXX 408
T+PRR+S + ++ RVA ERGE +G++VGY VR LE M T++ F T GI
Sbjct: 96 GITEPRRVSTVTLANRVAQERGELVGDTVGYVVRFLESMSSC-TKIKFMTEGILLREVLA 154
Query: 409 XXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYF--- 465
+IVDE HER M D +L + SAT++A FS +F
Sbjct: 155 DPLLTQYGVIIVDEAHERNMLTDMILGLLKKILRKRSSLKLIISSATIDASFFSEFFSWP 214
Query: 466 GGAPM---LHIPGFTYPVRAYFLENILEMTRYRLNTYNQIDDYGQEKSWKM-QKQALALR 521
G + L I G +PV ++L Y T + WK+ QK+
Sbjct: 215 GSGEVSVKLSIEGRMHPVSNFYLNE--PCADYVKETVETV--------WKLHQKEPPG-- 262
Query: 522 KRKSSIASAVEDALEAADF-REYSVQTQQ 549
+ + E+ LEA D REY ++Q
Sbjct: 263 -DILAFLTGQEEVLEALDLLREYIASSEQ 290
>UNIPROTKB|D3ZZG1 [details] [associations]
symbol:Dhx35 "Protein Dhx35" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1311165 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00951610
Ensembl:ENSRNOT00000068625 OrthoDB:EOG4V9TQ5 ArrayExpress:D3ZZG1
Uniprot:D3ZZG1
Length = 703
Score = 454 (164.9 bits), Expect = 2.8e-63, Sum P(2) = 2.8e-63
Identities = 117/442 (26%), Positives = 220/442 (49%)
Query: 556 PDSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQL--QAHPLL--GDPSRVLL 611
PD I + V H + E G +L F+TG +++ ++ L QA L G + +
Sbjct: 255 PDYIKATVDTVVKIH--QTEGDGDILAFLTGQEEVETVVSMLIEQARALARTGMKKHLRV 312
Query: 612 LACHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALN 671
L + + S EQ +F++ VRK+++ATN+AETSITI+ +V+VIDCG K +Y+
Sbjct: 313 LPMYAGLPSFEQMKVFERVSHSVRKVIVATNVAETSITISGIVYVIDCGFMKLRAYNPRT 372
Query: 672 NTPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCL 731
CL+ +S+ + G+CY LY ++ +PE+ R+ L + L
Sbjct: 373 AIECLVVVPVSQASANQRAGRGGRNRSGKCYRLYTEEAFEQLPQSTVPEMQRSNLAPVVL 432
Query: 732 QIKSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTV-LGRNLSMLPVEP 790
Q+K+L + S+ F + PP S+ A+E L +G LD++ LT LG ++ P+ P
Sbjct: 433 QLKALGIDSVLRF--HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNP 490
Query: 791 KLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALV 850
KML+ F C ++++ A + +++ F+ P ++K A +F+ + DHL ++
Sbjct: 491 MFAKMLLESGNFGCSQEILSIAAMMQIQNVFVFPSNQKSQATRVHRKFAVEE-GDHLTML 549
Query: 851 RAYDGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWS 910
Y+ + +H ++C ++FL+ + L ++R Q LL + ++E
Sbjct: 550 NVYEAFI---KHNKSSQWCQEHFLNYKGLVRAATVRDQLKKLLVKFQVPKMSSEG----- 601
Query: 911 HDEHLIRAVICAGLFPGLCSVVNKEKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFN 970
+ ++R ++ +G F + + A +T+ D L + + + + P W+++N
Sbjct: 602 DPDPVLRCIV-SGFF---ANAARFHSTGAYRTIRDDHEL-HIHPASVLYAEKPPRWVIYN 656
Query: 971 EKIKVNSVFLRDSTGVSDSVLL 992
E I+ + ++RD T + + LL
Sbjct: 657 EVIQTSKYYMRDVTAIESAWLL 678
Score = 265 (98.3 bits), Expect = 2.8e-63, Sum P(2) = 2.8e-63
Identities = 70/205 (34%), Positives = 104/205 (50%)
Query: 294 RRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQ 353
R+ LP +K R+ +L + Q VV+ GETGCGK+TQ+PQY+ E+ A G + TQ
Sbjct: 51 RQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQVPQYLAEAGW-TAEGRVVGV--TQ 107
Query: 354 PRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGR-DTRLMFCTTGIXXXXXXXXXXX 412
PRR++A+ V+ RVA ERG LG VGY +R + TR+ F T G+
Sbjct: 108 PRRVAAVTVAGRVADERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPLL 167
Query: 413 XGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFG----GA 468
+ V++DE HER + D + + SATL+AE F +F
Sbjct: 168 TKYSVVMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNETSD 227
Query: 469 P------MLHIPGFTYPVRAYFLEN 487
P +L + G T+PV ++L++
Sbjct: 228 PARDTCVILTVEGRTFPVDIFYLQS 252
>FB|FBgn0026713 [details] [associations]
symbol:l(1)G0007 "lethal (1) G0007" species:7227 "Drosophila
melanogaster" [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0002121 "inter-male
aggressive behavior" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0002121
GO:GO:0007476 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0000381 KO:K12815 GeneTree:ENSGT00700000104877 OMA:PSRSTWE
UniGene:Dm.4249 GeneID:32373 KEGG:dme:Dmel_CG32604
FlyBase:FBgn0026713 ChiTaRS:l(1)G0007 GenomeRNAi:32373
NextBio:778160 EMBL:AY058553 RefSeq:NP_572947.1 SMR:Q9VY54
MINT:MINT-334469 STRING:Q9VY54 EnsemblMetazoa:FBtr0073900
UCSC:CG32604-RA InParanoid:Q9VY54 Uniprot:Q9VY54
Length = 1222
Score = 406 (148.0 bits), Expect = 3.6e-63, Sum P(3) = 3.6e-63
Identities = 122/422 (28%), Positives = 202/422 (47%)
Query: 570 HIVKKERPGAVLVFMTGWDDINSLKDQLQAHPLLGDPSRVL-LLACHGSMASSEQRLIFD 628
H+ E G +L+FM G +DI + L+ D + L +L + + S Q IF
Sbjct: 737 HLTPNE--GDMLIFMPGQEDIEVTCEVLEERLAEIDNAPALSILPIYSQLPSDLQAKIFQ 794
Query: 629 KPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXX 688
K DG+RK V+ATN+AETS+T++ +++VID G K Y+ L IS+
Sbjct: 795 KSSDGLRKCVVATNIAETSLTVDGIIYVIDSGYCKLKVYNPRIGMDALQIYPISQANANQ 854
Query: 689 XXXXXXXVQPGECYHLYPRYVY-DAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSR 747
PG+ Y LY + Y D +PE+ RT L + L +KSL + + +F
Sbjct: 855 RSGRAGRTGPGQAYRLYTQRQYKDELLALTVPEIQRTNLANTVLLLKSLGVVDLLQF--H 912
Query: 748 ALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDP 807
+ PP ++ N++ L I+GALD LT LGR ++ P++P +MLI+ C
Sbjct: 913 FMDPPPQDNILNSLYQLWILGALDHTGALTTLGRQMAEFPLDPPQCQMLIVACRMGCSAE 972
Query: 808 VMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYE 867
V+ +V+ LSV F P ++D A+ + +F R SDHL + Y W+ Q+ Y
Sbjct: 973 VLIIVSMLSVPSIFYRPKGREDEADGVREKFQ-RPESDHLTYLNVYQQWR-----QNNYS 1026
Query: 868 YCWKN--FLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDEHLIRAVICAGLF 925
W N F+ + ++ + +R+Q LKD + +N + D ++R IC+ F
Sbjct: 1027 STWCNEHFIHIKAMRKVREVRQQ----LKDI-MTQQNLSVIS-CGIDWDIVRKCICSAYF 1080
Query: 926 PGLCSVVNKEKSIALKTMEDGQVL-LYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDST 984
+ + + L+T G L+ S G+ P ++V++E I +++ +T
Sbjct: 1081 YQAARLKGIGEYVNLRT---GMPCHLHPTSALYGLGTTP-DYVVYHELIMTAKEYMQCAT 1136
Query: 985 GV 986
V
Sbjct: 1137 AV 1138
Score = 339 (124.4 bits), Expect = 3.6e-63, Sum P(3) = 3.6e-63
Identities = 119/425 (28%), Positives = 191/425 (44%)
Query: 90 SYPLLEQQTSNYGRYAYQ-DESSDDSDREFGSTQQQMCGSTLDNIDEWRWK-LTMLLR-N 146
S L E++ R Y DE DD + FG + + +++ R K ++ R N
Sbjct: 310 SLDLWEEEQRRLDREWYNIDEGYDDENNPFGGPNSEYFRKREEQLEQKRTKRISAQQRQN 369
Query: 147 KDEQEVVSRAK----------KDRRDFEQLSALATRMGLHSRQYAKV---VVFSKAPLPN 193
+ E+ R + DF++ + + +H + +VF+K P P
Sbjct: 370 NRDNELWERNRMLTSGVVTLISVNDDFDEEALERVHLLVHHIIPPFLDGRIVFTKQPEPV 429
Query: 194 YRSDLDEKRPQREVILPFGLLREVDAHLKAYLSQKYINASMSSLSNVGSTT--NDEGLYE 251
+ K P ++ L L R+ A ++ Y QK + + T N G+
Sbjct: 430 ----VPVKDPTSDMAL---LARKGSALVRNYREQKERRKAQKKHWELSGTKLGNIMGVQR 482
Query: 252 -QQEQLVQNSVVRERI--LRQRSLQMHEKQQ-AWQESPEGQK--MLEFRRSLPSYKERDA 305
Q E ++ +++ + + H + Q +S +K + E RR LP + R
Sbjct: 483 PQDEDDMRFDKEKDKADYRKDQKFADHMRDQDTGGKSDFSRKKTISEQRRFLPVFASRQE 542
Query: 306 LLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAVSER 365
LL I EN V+++ GETG GKTTQL QY+ E + + RG I CTQPRR++AM+V++R
Sbjct: 543 LLNVIRENSVIIIVGETGSGKTTQLTQYLHE-DGYSKRGM---IGCTQPRRVAAMSVAKR 598
Query: 366 VAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHE 425
V+ E +LGE VGY +R E T + + T GI + +I+DE HE
Sbjct: 599 VSDEMDTQLGEDVGYAIRFEDCTSERTVIKYMTDGILLRESLRDPELDSYSAIIMDEAHE 658
Query: 426 RGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYFL 485
R ++ D L + SAT+++ F+++FG P IPG T+PV F
Sbjct: 659 RSLSTDVLFGLLREIVARRHDLKLIVTSATMDSSKFATFFGNVPTFTIPGRTFPVDVMFS 718
Query: 486 ENILE 490
+N E
Sbjct: 719 KNTCE 723
Score = 40 (19.1 bits), Expect = 3.6e-63, Sum P(3) = 3.6e-63
Identities = 13/40 (32%), Positives = 17/40 (42%)
Query: 80 RTRRLDWKAVSYPLLEQQTSNYGRYAYQDESSDDSDREFG 119
R R + ++V P E T + S DD D EFG
Sbjct: 204 RDRSMSERSVHTPR-EPGTPGGSSGGISNSSWDDEDGEFG 242
Score = 37 (18.1 bits), Expect = 2.3e-32, Sum P(2) = 2.3e-32
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 383 RLEGMKGRDTR 393
RLEG G++TR
Sbjct: 11 RLEGTAGQETR 21
Score = 37 (18.1 bits), Expect = 1.1e-31, Sum P(3) = 1.1e-31
Identities = 12/53 (22%), Positives = 21/53 (39%)
Query: 142 MLLRNKDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNY 194
++ R D + +V+ A D F + R + V+FSK +Y
Sbjct: 673 IVARRHDLKLIVTSATMDSSKFATFFGNVPTFTIPGRTFPVDVMFSKNTCEDY 725
>UNIPROTKB|D6RA70 [details] [associations]
symbol:YTHDC2 "Probable ATP-dependent RNA helicase YTHDC2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF01424 PROSITE:PS50088
PROSITE:PS51061 PROSITE:PS51194 SMART:SM00248 SMART:SM00490
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AC093208
EMBL:AC010389 HGNC:HGNC:24721 IPI:IPI00964960
ProteinModelPortal:D6RA70 SMR:D6RA70 Ensembl:ENST00000515883
UCSC:uc010jcf.2 HOGENOM:HOG000205632 ArrayExpress:D6RA70
Bgee:D6RA70 Uniprot:D6RA70
Length = 739
Score = 444 (161.4 bits), Expect = 2.5e-62, Sum P(2) = 2.5e-62
Identities = 94/225 (41%), Positives = 136/225 (60%)
Query: 293 FRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICT 352
FR+SLP +++++ ++K I EN+VV++ GETG GKTTQ+PQ++L+ + G C I CT
Sbjct: 189 FRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFK--NGIPCRIFCT 246
Query: 353 QPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXX 412
QPRR++A+AV+ERVAAER E++G+++GY++RLE T L FCT G+
Sbjct: 247 QPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDST 306
Query: 413 XG-VTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPML 471
VTHVIVDE+HER DFLL SA L+ LF YFG P++
Sbjct: 307 LSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVI 366
Query: 472 HIPGFTYPVRAYFLENILEMTRYRLNTYNQIDDYGQEKSWKMQKQ 516
+I G + V+ FLE+IL T Y T ++ Y +EK + ++Q
Sbjct: 367 YIQGRPFEVKEMFLEDILRTTGY---TNKEMLKYKKEKQQEEKQQ 408
Score = 270 (100.1 bits), Expect = 2.5e-62, Sum P(2) = 2.5e-62
Identities = 63/158 (39%), Positives = 94/158 (59%)
Query: 532 EDALEAADFREYSVQTQQSLSCWN----PDSIGFNLIEHVLCHIVKKERPGAVLVFMTGW 587
E +L + + S + ++ L ++ + + +LI H+L +I GAVL+F+ G+
Sbjct: 573 ESSLVQTNGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLYNICHSCDAGAVLIFLPGY 632
Query: 588 DDINSLKDQ-LQAHPLLGDPS-RVLLLACHGSMASSEQRLIFDKPEDGVRKIVLATNMAE 645
D+I L+D+ L D + R + H +M +S+Q+ + P GVRKI+L+TN+AE
Sbjct: 633 DEIVGLRDRILFDDKRFADSTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAE 692
Query: 646 TSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISK 683
TSIT+NDVVFVID GK KE S+DALN L WISK
Sbjct: 693 TSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISK 730
>UNIPROTKB|E2RQN1 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 EMBL:AAEX03013926
Ensembl:ENSCAFT00000014378 NextBio:20859776 Uniprot:E2RQN1
Length = 698
Score = 443 (161.0 bits), Expect = 3.3e-62, Sum P(2) = 3.3e-62
Identities = 120/446 (26%), Positives = 228/446 (51%)
Query: 556 PDSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQL--QAHPL--LGDPSRVLL 611
PD I + +E V+ I + E G +L F+TG +++ ++ L QA L G + +
Sbjct: 247 PDYIK-STVETVM-KIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGRTGMKRHLRV 304
Query: 612 LACHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALN 671
L + + S EQ +F++ VRK+++ATN+AETSITI+ +V+VIDCG K +Y+
Sbjct: 305 LPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRT 364
Query: 672 NTPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCL 731
CL+ + +S+ + G+CY LY +D +PE+ R+ L + L
Sbjct: 365 TIECLVVAPVSQASANQRAGRAGRSRSGKCYRLYTEEAFDKLPQCTVPEMQRSNLAPVIL 424
Query: 732 QIKSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTV-LGRNLSMLPVEP 790
Q+K+L + ++ F + PP S+ A+E L +G LD++ LT LG ++ P+ P
Sbjct: 425 QLKALGIDNVLRF--HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRVAEFPLNP 482
Query: 791 KLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALV 850
KML+ F C ++++ A + +++ F++P ++K A +F+ + DHL ++
Sbjct: 483 MFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPGNQKSQAIRVHRKFAVEE-GDHLTML 541
Query: 851 RAYDGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWS 910
Y+ + +H ++C ++FL+ + L ++R+Q LL + +++E
Sbjct: 542 NVYEAFI---KHNKNSQWCQEHFLNYKGLIRAATVREQLKKLLVKFQVPKKSSEG----- 593
Query: 911 HDEHLIRAVICAGLFPGLC---SVVNKEKSIALKTMEDGQVLLYSNSVNAGVPKIPYPW- 966
+ ++R ++ +G F S +++A E QV L++ V G + +
Sbjct: 594 DPDPVLRCIV-SGFFANAARFHSTGAYSRTLAHSGRE-AQVHLFT--VVPGTQSRYWGFR 649
Query: 967 LVFNEKIKVNSVFLRDSTGVSDSVLL 992
+++NE I+ + ++RD T + + LL
Sbjct: 650 VIYNEVIQTSKYYMRDVTAIESAWLL 675
Score = 267 (99.0 bits), Expect = 3.3e-62, Sum P(2) = 3.3e-62
Identities = 69/205 (33%), Positives = 104/205 (50%)
Query: 294 RRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQ 353
R+ LP +K R+ +L + Q VV+ GETGCGK+TQ+PQY+ E+ A G + TQ
Sbjct: 43 RQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQIPQYLAEAGW-TAEGRVVGV--TQ 99
Query: 354 PRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGR-DTRLMFCTTGIXXXXXXXXXXX 412
PRR++A+ V+ RVA ERG LG VGY +R + TR+ F T G+
Sbjct: 100 PRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPLL 159
Query: 413 XGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFG----GA 468
+ +++DE HER + D + + SATL+AE F +F
Sbjct: 160 TKYSAIMLDEAHERTLYTDIAIGLLKKIQRKRGDLRLLVASATLDAEKFRDFFNQNETSD 219
Query: 469 P------MLHIPGFTYPVRAYFLEN 487
P +L + G T+PV ++L++
Sbjct: 220 PTRDTCVILTVEGRTFPVDIFYLQS 244
>ASPGD|ASPL0000052850 [details] [associations]
symbol:AN1363 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K13117
EMBL:AACD01000018 OrthoDB:EOG4BGD47 RefSeq:XP_658967.1
EnsemblFungi:CADANIAT00001248 GeneID:2877144 KEGG:ani:AN1363.2
OMA:VAEEMRC Uniprot:Q5BDL7
Length = 670
Score = 441 (160.3 bits), Expect = 3.9e-62, Sum P(2) = 3.9e-62
Identities = 120/433 (27%), Positives = 214/433 (49%)
Query: 574 KERPGAVLVFMTGWDDINSLKDQLQAHPLLGDP-SRVLL-LACHGSMASSEQRLIFDKPE 631
+E G +L+F+TG ++I + + P S+ LL L + + + +Q +F+
Sbjct: 243 QEGEGDILIFLTGREEIETAIQLISERATTLHPKSQSLLPLPLYAGLTTDQQMYVFEPAP 302
Query: 632 DGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXX 691
+ RK+V++TN+AE S+TIN +V+V+DCG AK +YD L ISK
Sbjct: 303 ENTRKVVVSTNIAEASVTINGIVYVVDCGFAKLRAYDPSTGIETLTAVPISKAAAVQRAG 362
Query: 692 XXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQP 751
+PG+C+ LY ++ Y+ D +PE+ R+ L + +Q+K+L + +I F P
Sbjct: 363 RAGRTKPGKCFRLYTQHAYEQLPDATIPEIQRSNLAPVIMQLKALGIDNIVRF-DFLTSP 421
Query: 752 PEPLSVKNAIEYLQIIGALDENENLTV-LGRNLSMLPVEPKLGKMLILGAIFNCLDPVMT 810
P L ++ A E L +GA+D+ LT LG ++ L V+P + K+L+ F CL ++T
Sbjct: 422 PADLVIR-AFELLYSLGAIDDYAKLTKPLGMRMAELAVDPMMAKVLLSAQSFGCLSEILT 480
Query: 811 VVAGLSVRDPFLMPFD-KKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYEYC 869
+ A +S++ + D K +ES++ +F+ + DHL + Y + + +S ++C
Sbjct: 481 IAAMVSLQGAVWVQHDGDKKSSESSRRKFAVEE-GDHLTYLNVYQAFVTKGKKES--KWC 537
Query: 870 WKNFLSAQTLKAIDSLRKQFLFLLKDAGL-VDRN-TENCNK--WSHDEHLIRAVICAGLF 925
N L+ ++L S+R Q L+ G+ VD + NK S I+ + G F
Sbjct: 538 RDNLLNYRSLLRAVSVRAQLKRYLERFGIQVDETFPSHYNKSDLSKPAEKIQRCLTTGYF 597
Query: 926 PGLCSVVNKEKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFNEKIKVNS-VFLRDST 984
+ KT+ G L +++ + + W++F+E ++ F+RD T
Sbjct: 598 ---AHAARMQPDGTFKTVSGGMTL-HAHPSSLMFNR-KADWVIFHEIMQTGEKTFIRDIT 652
Query: 985 GVSDSVLLLFGGN 997
+ S LL + N
Sbjct: 653 KIEKSYLLEYAPN 665
Score = 266 (98.7 bits), Expect = 3.9e-62, Sum P(2) = 3.9e-62
Identities = 74/209 (35%), Positives = 99/209 (47%)
Query: 297 LPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRR 356
LP + + ++L + V +V G+TG GKTTQLPQY L+ G A ++ TQPRR
Sbjct: 22 LPIARHKQSILYLVETYPVTIVVGQTGSGKTTQLPQY-LDQAGWCTEGKAIAV--TQPRR 78
Query: 357 ISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXGVT 416
++A V+ RVA E KLGE VGY +R E TR+ F T G+ +
Sbjct: 79 VAATTVAARVAEEMRCKLGEDVGYSIRFEDRTSAMTRIKFLTDGMLLREALVDPLLSRYS 138
Query: 417 HVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGG-----AP-- 469
++VDE HER ++ D LL + SATL AE F YF G P
Sbjct: 139 VIMVDEAHERSLSTDILLGILKKILKRRPELRIIVSSATLQAEDFLRYFAGDESQQGPNG 198
Query: 470 --------MLHIPGFTYPVRAYFLENILE 490
++ I G YPV FLE+ E
Sbjct: 199 EVGGNTGKIISIEGRMYPVDTLFLESAAE 227
>UNIPROTKB|E1C4U5 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AADN02019394
IPI:IPI00591771 Ensembl:ENSGALT00000005796 Uniprot:E1C4U5
Length = 705
Score = 436 (158.5 bits), Expect = 1.6e-61, Sum P(2) = 1.6e-61
Identities = 118/444 (26%), Positives = 221/444 (49%)
Query: 556 PDSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQL--QAHPL--LGDPSRVLL 611
PD I + +E + I + E G +L F+TG +++ ++ L QA L G + +
Sbjct: 255 PDYIK-STVETAM-KIHQMENDGDILAFLTGQEEVETVVSMLIEQARALSRTGMRKHLRV 312
Query: 612 LACHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALN 671
L + + S +Q +F++ VRK+++ATN+AETSITI+ + +VIDCG K +Y+
Sbjct: 313 LPMYAGLPSPDQMKVFERVSRSVRKVIVATNVAETSITIHGIAYVIDCGFVKLRAYNPKT 372
Query: 672 NTPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYV--YDAFADYQLPELLRTPLQSL 729
CL+ +SK + G+CY LY ++ +PE+ R+ L +
Sbjct: 373 AIECLVVVPVSKASANQRAGRAGRNRSGKCYRLYTATEEDFEKLPQSTVPEMQRSNLAPV 432
Query: 730 CLQIKSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTV-LGRNLSMLPV 788
LQ+K+L + ++ F L PP S+ A+E L +G LD + LT LG ++ P+
Sbjct: 433 ILQLKALGIDNVLRF--PFLSPPPAQSMVQALELLYALGGLDMHCRLTEPLGMRIAEFPL 490
Query: 789 EPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLA 848
P KML+ F C ++T+ A + +++ FL+P ++K A +F+ + DHL
Sbjct: 491 NPMFAKMLLESGNFGCSQEILTIAAMMQIQNIFLIPPNQKSQAARQHRKFAVEE-GDHLT 549
Query: 849 LVRAYDGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNK 908
++ Y+ + +H ++C ++FL+ + L +R+Q LL + +++E
Sbjct: 550 MLNVYEAFV---KHSKSSQWCQEHFLNYKGLVRASVVREQLKKLLVCFKVPKKSSEG--- 603
Query: 909 WSHDEHLIRAVICAGLFPGLCSVVNKEKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLV 968
+ ++R ++ +G F + + A +T+ D L + + + + P W+V
Sbjct: 604 --DPDPVLRCIV-SGFF---ANAAKFHSTGAYRTIRDDHEL-HIHPTSVLYAEKPPRWVV 656
Query: 969 FNEKIKVNSVFLRDSTGVSDSVLL 992
+NE I+ ++RD T + + L+
Sbjct: 657 YNEVIQTAKYYMRDVTAIESAWLV 680
Score = 269 (99.8 bits), Expect = 1.6e-61, Sum P(2) = 1.6e-61
Identities = 68/205 (33%), Positives = 107/205 (52%)
Query: 294 RRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQ 353
R+ LP +K R+ +L + Q +V+ GETGCGK+TQ+PQY+ E+ A G + TQ
Sbjct: 51 RQKLPVFKLRNHILYLVESYQTLVIVGETGCGKSTQIPQYLAEAGW-TAEGRVVGV--TQ 107
Query: 354 PRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKG-RDTRLMFCTTGIXXXXXXXXXXX 412
PRR++A++V+ RVA ERG LG VGY +R + + TR+ F T G+
Sbjct: 108 PRRVAAVSVAGRVADERGAVLGHEVGYCIRFDDCTDPQATRIKFLTDGMLVREMMADPLL 167
Query: 413 XGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFG----GA 468
+ +++DE HER + D + + SATL+AE F +F G
Sbjct: 168 TRYSVLMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNDTGD 227
Query: 469 P------MLHIPGFTYPVRAYFLEN 487
P +L + G T+PV +++++
Sbjct: 228 PSKDTSVILTVEGRTFPVDIFYIQS 252
>UNIPROTKB|F1MWZ4 [details] [associations]
symbol:F1MWZ4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IEA] [GO:0033613 "activating
transcription factor binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0000182
"rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:DAAA02048722
IPI:IPI00693412 Ensembl:ENSBTAT00000016932 Uniprot:F1MWZ4
Length = 714
Score = 402 (146.6 bits), Expect = 3.6e-61, Sum P(2) = 3.6e-61
Identities = 93/325 (28%), Positives = 174/325 (53%)
Query: 572 VKKERPGA--VLVFMTGWDDINSLKD---QLQAHPLLGDPSRVLLLACHGSMASSEQRLI 626
+ +E P + +LVF+TG ++I ++ + H G PS +L+L + S+ ++Q +
Sbjct: 288 IHQEAPSSHDILVFLTGQEEIEAMSKTCRDIAKHLPDGCPS-MLVLPLYASLPYAQQLRV 346
Query: 627 FDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXX 686
F + G RK++++TN+AETSITI + +V+D G K Y+ + L +SK
Sbjct: 347 FQRAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQA 406
Query: 687 XXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLS 746
G CY LY ++ F +PE+ R L S+ LQ+ ++++ ++ F
Sbjct: 407 WQRTGRAGREDSGICYRLYTEDEFEKFEKMTVPEIQRCNLASVMLQLLAMKIPNVLTF-- 464
Query: 747 RALQPPEPLSVKNAIEYLQIIGALDENEN---LTVLGRNLSMLPVEPKLGKMLILGAIFN 803
+ P P ++ AI L+++GAL+ + LT +GR ++ P+EPK K ++L F+
Sbjct: 465 DFMSKPSPDHIQAAIAQLELLGALEHRDGQLTLTPMGRKMAAFPLEPKFAKTILLSPKFH 524
Query: 804 CLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQ 863
C + ++T+VA LSV P ++D +S + +F + + DHL L+ Y +K+ ++
Sbjct: 525 CTEEILTIVALLSVDSILYNPPSRRDEVQSVRKKFVSSE-GDHLTLLNVYRTFKNTGGNK 583
Query: 864 SGYEYCWKNFLSAQTLKAIDSLRKQ 888
E+C +NF++++ + + +R Q
Sbjct: 584 ---EWCKENFVNSKNMMLVAEVRAQ 605
Score = 304 (112.1 bits), Expect = 3.6e-61, Sum P(2) = 3.6e-61
Identities = 70/206 (33%), Positives = 111/206 (53%)
Query: 284 SPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAAR 343
SP + + + RR+LP ++ R LL + V+ GETG GKTTQ+PQY+ E
Sbjct: 68 SPYPEAVEQQRRNLPIFQARGQLLAQLRNLDSAVLIGETGSGKTTQIPQYLYEGGI---- 123
Query: 344 GAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXX 403
G I TQPRR++A++++ RV+ E+ +LG+ VGY VR + + DT++ F T G+
Sbjct: 124 GRQAIIAVTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSDDTKIKFLTDGMLL 183
Query: 404 XXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXX-----XMSATLNA 458
+ +I+DE HER ++ D L V MSAT++
Sbjct: 184 REAISDCLLRKYSCIILDEAHERTLHTDVLFGVVKAAQKRRKELGKLPLKVLVMSATMDV 243
Query: 459 ELFSSYFGGAPMLHIPGFTYPVRAYF 484
+LFS YF GAP+L++ G +P++ ++
Sbjct: 244 DLFSQYFNGAPVLYLEGRQHPIQIFY 269
>UNIPROTKB|E2RQN7 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AAEX03013926
Ensembl:ENSCAFT00000014371 Uniprot:E2RQN7
Length = 702
Score = 434 (157.8 bits), Expect = 4.3e-61, Sum P(2) = 4.3e-61
Identities = 116/443 (26%), Positives = 222/443 (50%)
Query: 556 PDSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQL--QAHPL--LGDPSRVLL 611
PD I + +E V+ I + E G +L F+TG +++ ++ L QA L G + +
Sbjct: 255 PDYIK-STVETVM-KIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGRTGMKRHLRV 312
Query: 612 LACHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALN 671
L + + S EQ +F++ VRK+++ATN+AETSITI+ +V+VIDCG K +Y+
Sbjct: 313 LPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRT 372
Query: 672 NTPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCL 731
CL+ + +S+ + G+CY LY +D +PE+ R+ L + L
Sbjct: 373 TIECLVVAPVSQASANQRAGRAGRSRSGKCYRLYTEEAFDKLPQCTVPEMQRSNLAPVIL 432
Query: 732 QIKSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTV-LGRNLSMLPVEP 790
Q+K+L + ++ F + PP S+ A+E L +G LD++ LT LG ++ P+ P
Sbjct: 433 QLKALGIDNVLRF--HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRVAEFPLNP 490
Query: 791 KLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALV 850
KML+ F C ++++ A + +++ F++P ++K A +F+ + DHL ++
Sbjct: 491 MFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPGNQKSQAIRVHRKFAVEE-GDHLTML 549
Query: 851 RAYDGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWS 910
Y+ + +H ++C ++FL+ + L ++R+Q LL + +++E
Sbjct: 550 NVYEAFI---KHNKNSQWCQEHFLNYKGLIRAATVREQLKKLLVKFQVPKKSSEG----- 601
Query: 911 HDEHLIRAVICAGLFPGLCSVVNKEKSIALKTMEDGQVLLYSNSVNAG-VPKIPYPWLVF 969
+ ++R ++ +G F + + ++ L Y N + K+ ++
Sbjct: 602 DPDPVLRCIV-SGFFANAARF-HSTGAYSVILSPHSLYLYYLTLFNRKFLQKV-----IY 654
Query: 970 NEKIKVNSVFLRDSTGVSDSVLL 992
NE I+ + ++RD T + + LL
Sbjct: 655 NEVIQTSKYYMRDVTAIESAWLL 677
Score = 267 (99.0 bits), Expect = 4.3e-61, Sum P(2) = 4.3e-61
Identities = 69/205 (33%), Positives = 104/205 (50%)
Query: 294 RRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQ 353
R+ LP +K R+ +L + Q VV+ GETGCGK+TQ+PQY+ E+ A G + TQ
Sbjct: 51 RQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQIPQYLAEAGW-TAEGRVVGV--TQ 107
Query: 354 PRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGR-DTRLMFCTTGIXXXXXXXXXXX 412
PRR++A+ V+ RVA ERG LG VGY +R + TR+ F T G+
Sbjct: 108 PRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPLL 167
Query: 413 XGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFG----GA 468
+ +++DE HER + D + + SATL+AE F +F
Sbjct: 168 TKYSAIMLDEAHERTLYTDIAIGLLKKIQRKRGDLRLLVASATLDAEKFRDFFNQNETSD 227
Query: 469 P------MLHIPGFTYPVRAYFLEN 487
P +L + G T+PV ++L++
Sbjct: 228 PTRDTCVILTVEGRTFPVDIFYLQS 252
>GENEDB_PFALCIPARUM|PFL1525c [details] [associations]
symbol:PFL1525c "pre-mRNA splicing factor RNA
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0008380
"RNA splicing" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0005681
GO:GO:0003676 GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 370 (135.3 bits), Expect = 4.8e-61, Sum P(3) = 4.8e-61
Identities = 103/364 (28%), Positives = 180/364 (49%)
Query: 635 RKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXX 694
RKI+L+TN+ ETSITI+++V+VID G K+ Y+ + L+ SK
Sbjct: 803 RKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQRTGRAG 862
Query: 695 XVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPEP 754
+ G+C+ L+ + + +D +PE+ R + S+ L +KSL + I F L PP P
Sbjct: 863 RKRDGKCFRLFTKKSFIDLSDNSIPEIQRCEISSMILLLKSLGMDDIINF--DFLDPPSP 920
Query: 755 LSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAI-FNCLDPVMTVVA 813
+ + +E L +GAL++ NLT GR ++ P + K KM++ A +NC+D ++ V +
Sbjct: 921 IVIIKGLELLYSLGALNDEGNLTRTGRKMAEFPTDVKSSKMILSAAEKYNCVDEILNVAS 980
Query: 814 GLS-VRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYEYCWKN 872
L+ + F + K+ AE+ K F D L + Y K E + +C+ +
Sbjct: 981 MLTHANNIFYVQKGKEKEAENIKKMFIIEGGGDFLLFLNIY---KQCEENNFSTSFCYDH 1037
Query: 873 FLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDE-HLIRAVICAGLFPGLCSV 931
FL TL + ++ Q L + + +D C +H+ + I+ I + F
Sbjct: 1038 FLQYHTLIKVKDVKTQLLSICEK---IDIPITTCGIENHESINNIKKSIVSAFFTNAALP 1094
Query: 932 VNKEKSIALKTMEDGQVL-LYSNSV---NAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVS 987
VNK + LK ++ QV+ +Y NSV + + ++F E IK+N ++R + V+
Sbjct: 1095 VNKTE---LKIIKLNQVVSIYPNSVLFKKNIMEENENVCIIFYEVIKLNKSYIRHNIPVN 1151
Query: 988 DSVL 991
++L
Sbjct: 1152 KNLL 1155
Score = 346 (126.9 bits), Expect = 4.8e-61, Sum P(3) = 4.8e-61
Identities = 82/261 (31%), Positives = 138/261 (52%)
Query: 227 QKYINASMSSLSNVGSTTNDEGLYEQQEQLVQNSVVRERILRQRSLQMHEKQQAWQESPE 286
++ ++++ S S N+ GL + E + S + ++ E + +E +
Sbjct: 369 ERNVDSNKRSFEKKESELNENGLTDVVEFVHLESFYGMNEKEKELEKLFEDIKKRKEK-K 427
Query: 287 GQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAA 346
+K+++ R+ LP Y R +LKAI N+++++ GETG GK+TQL QY+ E + G
Sbjct: 428 MKKIIDERKRLPIYSYRYDILKAIKNNKILILVGETGSGKSTQLTQYLYECKYHMY-G-- 484
Query: 347 CSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXX 406
+IICTQPRRI+ +A++ RVA E K+G+ VGY +R + T++M+ T G+
Sbjct: 485 -NIICTQPRRIACIAIANRVAEEMNVKIGKEVGYVIRFQNKTSEATKIMYMTDGMFLRLL 543
Query: 407 XXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFG 466
++ +I+DE HER ++ D +L + SATL+AE S+YF
Sbjct: 544 LYNPTLEDISVLIIDEAHERALHTDVILPIVKDICNFRENIRVVISSATLDAEKISTYFN 603
Query: 467 GAPMLHIPGFTYPVRAYFLEN 487
AP+ ++PG Y V Y+ N
Sbjct: 604 CAPIFYVPGRKYNVDIYYTIN 624
Score = 50 (22.7 bits), Expect = 4.8e-61, Sum P(3) = 4.8e-61
Identities = 22/99 (22%), Positives = 46/99 (46%)
Query: 541 REYSVQTQQSLSCWNPDSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQLQ-- 598
R+Y+V ++ N +S + I + I + G +LVF+ G +I ++ +L+
Sbjct: 613 RKYNVDIYYTI---NNESNYISAIVITILQIHITQGKGDILVFLPGQYEIELVQQELENK 669
Query: 599 AHPLLGDPSRVLLLACHGSMASSEQRLIFDK--PEDGVR 635
+ L +++L + S+ Q IF+ ED ++
Sbjct: 670 LNELAPKYRNLVILPIYSSLPVEYQARIFEDVTEEDNMK 708
Score = 46 (21.3 bits), Expect = 8.9e-30, Sum P(3) = 8.9e-30
Identities = 32/196 (16%), Positives = 79/196 (40%)
Query: 147 KDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNYRSDLDEKRPQRE 206
K+ +E + KKD R ++ + + +++S L DL E + ++
Sbjct: 57 KNNEEYIEYLKKDARRKYLKEREKEKLDITKKLLDDELLYSTVKLEG--KDLKELQFSKK 114
Query: 207 VILPFGLLREVDAHLKAYLSQK--YINASMSSLSNVGSTTNDE---GLYEQQEQLVQNSV 261
+ + + +E + +L+ L ++ Y + + ND+ LY EQ++ +
Sbjct: 115 I---YNIAKE-NINLREKLQEESYYFQQDIDKNKKTQTYENDKVDKSLYNYDEQILNKGI 170
Query: 262 VR--ERILRQRSLQMHEKQQAWQES--PEGQKMLEFRRSLPSYKERDALLKAISENQVVV 317
++ I +Q + + + + + +K ++ R S K ++ K + + +
Sbjct: 171 LKFGSAISKQNIQKQNNNEFVFDDDIITTNRKSIK-RESFEEKKMNESPTKKKKKRKDDI 229
Query: 318 VSGETGCGKTTQLPQY 333
S + C K + +Y
Sbjct: 230 ES-DNKCDKDEKYDKY 244
Score = 43 (20.2 bits), Expect = 4.0e-29, Sum P(2) = 4.0e-29
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 231 NASMSSLSNVGSTTNDEGLYEQQEQLVQ---NSVVRERIL 267
N +S NV + N + E+ E+L + N+ +R +I+
Sbjct: 767 NVGNNSKMNVSQSKNKRNINEEIEELKRINTNNKIRRKII 806
>UNIPROTKB|Q8I5A4 [details] [associations]
symbol:PFL1525c "Pre-mRNA splicing factor RNA helicase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008380 GO:GO:0005681 GO:GO:0003676
GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 370 (135.3 bits), Expect = 4.8e-61, Sum P(3) = 4.8e-61
Identities = 103/364 (28%), Positives = 180/364 (49%)
Query: 635 RKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXX 694
RKI+L+TN+ ETSITI+++V+VID G K+ Y+ + L+ SK
Sbjct: 803 RKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQRTGRAG 862
Query: 695 XVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPEP 754
+ G+C+ L+ + + +D +PE+ R + S+ L +KSL + I F L PP P
Sbjct: 863 RKRDGKCFRLFTKKSFIDLSDNSIPEIQRCEISSMILLLKSLGMDDIINF--DFLDPPSP 920
Query: 755 LSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAI-FNCLDPVMTVVA 813
+ + +E L +GAL++ NLT GR ++ P + K KM++ A +NC+D ++ V +
Sbjct: 921 IVIIKGLELLYSLGALNDEGNLTRTGRKMAEFPTDVKSSKMILSAAEKYNCVDEILNVAS 980
Query: 814 GLS-VRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYEYCWKN 872
L+ + F + K+ AE+ K F D L + Y K E + +C+ +
Sbjct: 981 MLTHANNIFYVQKGKEKEAENIKKMFIIEGGGDFLLFLNIY---KQCEENNFSTSFCYDH 1037
Query: 873 FLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDE-HLIRAVICAGLFPGLCSV 931
FL TL + ++ Q L + + +D C +H+ + I+ I + F
Sbjct: 1038 FLQYHTLIKVKDVKTQLLSICEK---IDIPITTCGIENHESINNIKKSIVSAFFTNAALP 1094
Query: 932 VNKEKSIALKTMEDGQVL-LYSNSV---NAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVS 987
VNK + LK ++ QV+ +Y NSV + + ++F E IK+N ++R + V+
Sbjct: 1095 VNKTE---LKIIKLNQVVSIYPNSVLFKKNIMEENENVCIIFYEVIKLNKSYIRHNIPVN 1151
Query: 988 DSVL 991
++L
Sbjct: 1152 KNLL 1155
Score = 346 (126.9 bits), Expect = 4.8e-61, Sum P(3) = 4.8e-61
Identities = 82/261 (31%), Positives = 138/261 (52%)
Query: 227 QKYINASMSSLSNVGSTTNDEGLYEQQEQLVQNSVVRERILRQRSLQMHEKQQAWQESPE 286
++ ++++ S S N+ GL + E + S + ++ E + +E +
Sbjct: 369 ERNVDSNKRSFEKKESELNENGLTDVVEFVHLESFYGMNEKEKELEKLFEDIKKRKEK-K 427
Query: 287 GQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAA 346
+K+++ R+ LP Y R +LKAI N+++++ GETG GK+TQL QY+ E + G
Sbjct: 428 MKKIIDERKRLPIYSYRYDILKAIKNNKILILVGETGSGKSTQLTQYLYECKYHMY-G-- 484
Query: 347 CSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXX 406
+IICTQPRRI+ +A++ RVA E K+G+ VGY +R + T++M+ T G+
Sbjct: 485 -NIICTQPRRIACIAIANRVAEEMNVKIGKEVGYVIRFQNKTSEATKIMYMTDGMFLRLL 543
Query: 407 XXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFG 466
++ +I+DE HER ++ D +L + SATL+AE S+YF
Sbjct: 544 LYNPTLEDISVLIIDEAHERALHTDVILPIVKDICNFRENIRVVISSATLDAEKISTYFN 603
Query: 467 GAPMLHIPGFTYPVRAYFLEN 487
AP+ ++PG Y V Y+ N
Sbjct: 604 CAPIFYVPGRKYNVDIYYTIN 624
Score = 50 (22.7 bits), Expect = 4.8e-61, Sum P(3) = 4.8e-61
Identities = 22/99 (22%), Positives = 46/99 (46%)
Query: 541 REYSVQTQQSLSCWNPDSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQLQ-- 598
R+Y+V ++ N +S + I + I + G +LVF+ G +I ++ +L+
Sbjct: 613 RKYNVDIYYTI---NNESNYISAIVITILQIHITQGKGDILVFLPGQYEIELVQQELENK 669
Query: 599 AHPLLGDPSRVLLLACHGSMASSEQRLIFDK--PEDGVR 635
+ L +++L + S+ Q IF+ ED ++
Sbjct: 670 LNELAPKYRNLVILPIYSSLPVEYQARIFEDVTEEDNMK 708
Score = 46 (21.3 bits), Expect = 8.9e-30, Sum P(3) = 8.9e-30
Identities = 32/196 (16%), Positives = 79/196 (40%)
Query: 147 KDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNYRSDLDEKRPQRE 206
K+ +E + KKD R ++ + + +++S L DL E + ++
Sbjct: 57 KNNEEYIEYLKKDARRKYLKEREKEKLDITKKLLDDELLYSTVKLEG--KDLKELQFSKK 114
Query: 207 VILPFGLLREVDAHLKAYLSQK--YINASMSSLSNVGSTTNDE---GLYEQQEQLVQNSV 261
+ + + +E + +L+ L ++ Y + + ND+ LY EQ++ +
Sbjct: 115 I---YNIAKE-NINLREKLQEESYYFQQDIDKNKKTQTYENDKVDKSLYNYDEQILNKGI 170
Query: 262 VR--ERILRQRSLQMHEKQQAWQES--PEGQKMLEFRRSLPSYKERDALLKAISENQVVV 317
++ I +Q + + + + + +K ++ R S K ++ K + + +
Sbjct: 171 LKFGSAISKQNIQKQNNNEFVFDDDIITTNRKSIK-RESFEEKKMNESPTKKKKKRKDDI 229
Query: 318 VSGETGCGKTTQLPQY 333
S + C K + +Y
Sbjct: 230 ES-DNKCDKDEKYDKY 244
Score = 43 (20.2 bits), Expect = 4.0e-29, Sum P(2) = 4.0e-29
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 231 NASMSSLSNVGSTTNDEGLYEQQEQLVQ---NSVVRERIL 267
N +S NV + N + E+ E+L + N+ +R +I+
Sbjct: 767 NVGNNSKMNVSQSKNKRNINEEIEELKRINTNNKIRRKII 806
>TAIR|locus:2197965 [details] [associations]
symbol:AT1G26370 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
IPI:IPI00532541 RefSeq:NP_173961.3 UniGene:At.15978
ProteinModelPortal:F4IE66 SMR:F4IE66 PRIDE:F4IE66
EnsemblPlants:AT1G26370.1 GeneID:839179 KEGG:ath:AT1G26370
OMA:ADISTNI Uniprot:F4IE66
Length = 717
Score = 405 (147.6 bits), Expect = 7.2e-61, Sum P(3) = 7.2e-61
Identities = 125/436 (28%), Positives = 218/436 (50%)
Query: 574 KERPGAVLVFMTGWDDINSLK----DQLQAHPLLGDPSRVLLLACHGSMASSEQRLIFDK 629
+E+PG +LVF+TG D+I S++ ++LQ P D ++L LA ++ S +Q +F
Sbjct: 288 EEKPGDILVFLTGQDEIESVERLVQERLQNIP--EDKRKLLPLAIFSALPSEQQMKVFAP 345
Query: 630 PEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXX 689
G RK++LATN+AETSITI + +VID G K SYD L SK
Sbjct: 346 APTGFRKVILATNIAETSITIPGIRYVIDPGFVKARSYDPSKGMESLDVVPASKAQTLQR 405
Query: 690 XXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRAL 749
PG+ + LYP ++ D PE+ R L ++ LQ+K+L + I F +
Sbjct: 406 SGRAGREGPGKSFRLYPEREFEKLEDSTKPEIKRCNLSNIILQLKALGIDDIVGF--DFI 463
Query: 750 QPPEPLSVKNAIEYLQIIGALDENENL-TVLGRNLSMLPVEPKLGKMLILGAIFNCLDPV 808
P ++ A+ L +GAL ++ L +G +S LP+EP K LIL FNCL+ +
Sbjct: 464 DKPSRGAIIKALAELHSLGALADDGKLENPVGYQMSRLPLEPVYSKALILANQFNCLEEM 523
Query: 809 MTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAY-DGWKDAERHQ---S 864
+ VA LSV F P +K++ A ++K F++ + DHL + Y + + E+ + S
Sbjct: 524 LITVAVLSVESIFYDPREKREEARTSKNHFASVE-GDHLTYLSVYRESDEFLEKRKAAGS 582
Query: 865 GY-------EYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDEHLIR 917
G ++C +N++++++LK + +Q ++ G N +C +D R
Sbjct: 583 GNNIDKIMKKWCKENYVNSRSLKHARDIYRQIREHVEQIGF---NVSSCG---NDMLAFR 636
Query: 918 AVICAGLFPGLCSVVNKEKSIALKTMEDGQVL-LYSNSVNAGVPKIPYPWLVFNEKIKVN 976
+ A F ++ + +E G+V+ ++ SV + + ++FNE ++ +
Sbjct: 637 RCLAASFF---LKAAQRQLDGTYRALESGEVVHIHPTSV---LFRAKPECVIFNELMQTS 690
Query: 977 SVFLRDSTGVSDSVLL 992
++++ T + DS+ L
Sbjct: 691 KKYIKNLT-IIDSLWL 705
Score = 253 (94.1 bits), Expect = 7.2e-61, Sum P(3) = 7.2e-61
Identities = 56/147 (38%), Positives = 83/147 (56%)
Query: 288 QKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAAC 347
QK+ E RRSLP L++ + +N ++++ GETG GKTTQLPQ++ + G
Sbjct: 32 QKIAEHRRSLPIASVEKRLVEEVQKNDILIIVGETGSGKTTQLPQFLYNAGF-CREGKMI 90
Query: 348 SIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXX 407
I TQPRRI+A+ V++RVA E +LG+ VGY +R + TRL + T G+
Sbjct: 91 GI--TQPRRIAAVTVAKRVAEECEVQLGQKVGYSIRFDDTTSGSTRLKYMTDGLLLREAL 148
Query: 408 XXXXXXGVTHVIVDEIHERGMNEDFLL 434
+ +IVDE H+R ++ D LL
Sbjct: 149 LDPHLSRYSVIIVDEAHDRSVHTDVLL 175
Score = 88 (36.0 bits), Expect = 7.2e-61, Sum P(3) = 7.2e-61
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 452 MSATLNAELFSSYFGGAPMLHIPGFTYPV 480
MSA+L+A +FS YFGGA +H+ G +PV
Sbjct: 234 MSASLDARVFSEYFGGAKAVHVQGRQFPV 262
Score = 38 (18.4 bits), Expect = 1.5e-33, Sum P(2) = 1.5e-33
Identities = 9/43 (20%), Positives = 20/43 (46%)
Query: 152 VVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNY 194
++ A D R F + A + + RQ+ ++++ P +Y
Sbjct: 232 IIMSASLDARVFSEYFGGAKAVHVQGRQFPVDILYTVHPESDY 274
>UNIPROTKB|E1BYA5 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000182 "rDNA binding"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0045943 "positive regulation of
transcription from RNA polymerase I promoter" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AADN02025994
IPI:IPI00823199 Ensembl:ENSGALT00000002492 ArrayExpress:E1BYA5
Uniprot:E1BYA5
Length = 660
Score = 395 (144.1 bits), Expect = 9.8e-60, Sum P(2) = 9.8e-60
Identities = 96/328 (29%), Positives = 174/328 (53%)
Query: 572 VKKERPGA--VLVFMTGWDDINSLKD---QLQAHPLLGDPSRVLLLACHGSMASSEQRLI 626
+ +E P + +LVF+TG ++I ++ + H G P ++ ++ + S+ S+Q +
Sbjct: 231 IHQEAPSSQDILVFLTGQEEIEAMTKTCRDIAKHLPDGCP-QMTVMPLYASLPYSQQLRV 289
Query: 627 FDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXX 686
F G RK++L+TN+AETSITI+ + +V+D G K Y+ L +SK
Sbjct: 290 FQAAPKGCRKVILSTNIAETSITISGIKYVVDTGMVKAKKYNPEIGLEVLAVQRVSKAQA 349
Query: 687 XXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPE---LLRTPLQSLCLQIKSLQLGSISE 743
G CY LY ++ F +PE L R L S+ LQ+ +L++ +I
Sbjct: 350 WQRTGRAGREDSGICYRLYTEDEFEKFDKMTVPEIQSLCRCNLASVLLQLLALRIPNILT 409
Query: 744 FLSRALQPPEPLSVKNAIEYLQIIGALDENEN---LTVLGRNLSMLPVEPKLGKMLILGA 800
F + P P +++ AIE L ++GA+++ E+ LT LGR ++ P+EPK K ++L
Sbjct: 410 F--DFMSKPSPDAIQAAIEQLDLLGAVEQKEDQLVLTPLGRKMAAFPLEPKFSKTILLSP 467
Query: 801 IFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAE 860
F+C + ++T+V+ LSV P ++D +S + +F + + DHL L+ Y +K+
Sbjct: 468 KFHCTEEILTIVSLLSVDSVLYNPPARRDEVQSVRKKFISSE-GDHLTLLNVYRAFKNVS 526
Query: 861 RHQSGYEYCWKNFLSAQTLKAIDSLRKQ 888
++ E+C +NF++ + + + +R Q
Sbjct: 527 GNK---EWCKENFVNGRNMMLVSDVRAQ 551
Score = 295 (108.9 bits), Expect = 9.8e-60, Sum P(2) = 9.8e-60
Identities = 69/196 (35%), Positives = 106/196 (54%)
Query: 294 RRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQ 353
RR LP ++ R LL + + V+ GETG GKTTQ+PQY+ E A G I TQ
Sbjct: 21 RRELPIFQARGPLLSQLRGLECAVLIGETGSGKTTQIPQYLYE----AGIGRQGIIAVTQ 76
Query: 354 PRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXX 413
PRR++A++++ RV+ E+ +LG+ VGY VR + + +TR+ F T G+
Sbjct: 77 PRRVAAISLATRVSDEKRTELGKLVGYTVRFDDLTSDETRIKFLTDGMLLREAIGDPILR 136
Query: 414 GVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXX-----XMSATLNAELFSSYFGGA 468
+ VI+DE HER ++ D L V MSAT++ + FS YF GA
Sbjct: 137 KYSVVILDEAHERTIHTDVLFGVVKAAQKKRKELGKLPLKVIVMSATMDVDQFSQYFNGA 196
Query: 469 PMLHIPGFTYPVRAYF 484
P+L++ G +P++ ++
Sbjct: 197 PVLYLEGRQHPIQVFY 212
Score = 42 (19.8 bits), Expect = 3.8e-33, Sum P(2) = 3.8e-33
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 152 VVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNY 194
+V A D F Q A + L RQ+ V ++K P +Y
Sbjct: 178 IVMSATMDVDQFSQYFNGAPVLYLEGRQHPIQVFYTKQPQSDY 220
>UNIPROTKB|Q5THR1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
EMBL:AL023803 UniGene:Hs.444520 HGNC:HGNC:15861 IPI:IPI00642913
SMR:Q5THR1 Ensembl:ENST00000373325 Uniprot:Q5THR1
Length = 679
Score = 414 (150.8 bits), Expect = 1.1e-59, Sum P(3) = 1.1e-59
Identities = 107/375 (28%), Positives = 193/375 (51%)
Query: 556 PDSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQL--QAHPLL--GDPSRVLL 611
PD I + +E V+ I + E G VL F+TG +++ ++ L QA L G + +
Sbjct: 255 PDYIK-STVETVV-KIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGMKRHLRV 312
Query: 612 LACHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALN 671
L + + S EQ +F++ VRK+++ATN+AETSITI+ +V+VIDCG K +Y+
Sbjct: 313 LPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRT 372
Query: 672 NTPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCL 731
CL+ +S+ + G+CY LY +D +PE+ R+ L + L
Sbjct: 373 AIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDKLPQSTVPEMQRSNLAPVIL 432
Query: 732 QIKSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTV-LGRNLSMLPVEP 790
Q+K+L + ++ F + PP S+ A+E L +G LD++ LT LG ++ P+ P
Sbjct: 433 QLKALGIDNVLRF--HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNP 490
Query: 791 KLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALV 850
KML+ F C ++++ A + +++ F++P ++K A +F+ + DHL ++
Sbjct: 491 MFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPPNQKSHAIRVHRKFAVEE-GDHLTML 549
Query: 851 RAYDGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWS 910
Y+ + +H ++C ++FL+ + L ++R+Q LL + +++E
Sbjct: 550 NIYEAFI---KHNKDSKWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPRKSSEG----- 601
Query: 911 HDEHLIRAVICAGLF 925
D L+ I +G F
Sbjct: 602 -DPDLVLRCIVSGFF 615
Score = 267 (99.0 bits), Expect = 1.1e-59, Sum P(3) = 1.1e-59
Identities = 69/205 (33%), Positives = 105/205 (51%)
Query: 294 RRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQ 353
R+ LP +K R+ +L I Q VV+ GETGCGK+TQ+PQY+ E+ A G + TQ
Sbjct: 51 RQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGW-TAEGRVVGV--TQ 107
Query: 354 PRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGR-DTRLMFCTTGIXXXXXXXXXXX 412
PRR++A+ V+ RVA ERG LG VGY +R + + TR+ F T G+
Sbjct: 108 PRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPLL 167
Query: 413 XGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFG----GA 468
+ +++DE HER + D + + SATL+A+ F +F
Sbjct: 168 TKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNETSD 227
Query: 469 P------MLHIPGFTYPVRAYFLEN 487
P +L + G T+PV ++L++
Sbjct: 228 PARDTCVILTVEGRTFPVDIFYLQS 252
Score = 49 (22.3 bits), Expect = 1.1e-59, Sum P(3) = 1.1e-59
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 967 LVFNEKIKVNSVFLRDSTGVSDSVLL 992
+++NE I+ + ++RD T + + LL
Sbjct: 629 VIYNEVIQTSKYYMRDVTAIESAWLL 654
>UNIPROTKB|F1MNA1 [details] [associations]
symbol:TDRD9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071547 "piP-body" evidence=IEA] [GO:0043046 "DNA
methylation involved in gamete generation" evidence=IEA]
[GO:0034587 "piRNA metabolic process" evidence=IEA] [GO:0009566
"fertilization" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0007140 "male meiosis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
InterPro:IPR002999 GO:GO:0005524 GO:GO:0005634 GO:GO:0009566
GO:GO:0007283 GO:GO:0003676 GO:GO:0007140 Pfam:PF00567
SMART:SM00333 PROSITE:PS50304 GO:GO:0043046 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0034587
GeneTree:ENSGT00700000104393 GO:GO:0008026 GO:GO:0071547
OMA:INDWFTI EMBL:DAAA02053320 EMBL:DAAA02053321 EMBL:DAAA02053322
EMBL:DAAA02053323 IPI:IPI00699308 Ensembl:ENSBTAT00000027199
Uniprot:F1MNA1
Length = 1392
Score = 395 (144.1 bits), Expect = 3.0e-59, Sum P(3) = 3.0e-59
Identities = 106/299 (35%), Positives = 156/299 (52%)
Query: 575 ERPGAVLVFMTGWDDINSLKDQLQAHPLLGDP--SRVLLLACHGSMASSEQRLIFDKPED 632
ER +VLVF+ G +IN + H LL + R+ + H S+ EQ +F P
Sbjct: 390 ER-SSVLVFLPGLGEINYM------HELLTNMVHKRLQVYPLHSSVTLEEQNNVFLSPVP 442
Query: 633 GVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXX 692
G RKI+L+TN+AE+S+T+ DV +VID + D N L SW SK
Sbjct: 443 GYRKIILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCEQRKGR 502
Query: 693 XXXVQPGECYHLYPRYVYD-AFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQP 751
V G CY L + +D + ++ +PE+LR PL S L++K L +G L+ AL P
Sbjct: 503 AGRVSKGYCYRLVHKDFWDNSIPNHVIPEMLRCPLGSTILKVKLLDMGEPRALLATALSP 562
Query: 752 PEPLSVKNAIEYLQIIGAL-------DENEN---LTVLGRNLSMLPVEPKLGKMLILGAI 801
P ++ I L+ +GAL D+N + LT LGR L+ LPV +LGK+++LG +
Sbjct: 563 PSLSDIERTILLLKEVGALAVSGRREDDNPHDGELTFLGRVLAQLPVSQQLGKLIVLGHV 622
Query: 802 FNCLDPVMTVV---AGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWK 857
F CLD + +V A LS+++ F MPF + K F+ SD +ALV A+ W+
Sbjct: 623 FGCLDECLIIVLIAASLSLKNFFAMPFRQHLDGYRNKVNFAGSSRSDCIALVEAFRAWQ 681
Score = 318 (117.0 bits), Expect = 3.0e-59, Sum P(3) = 3.0e-59
Identities = 72/212 (33%), Positives = 112/212 (52%)
Query: 297 LPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRR 356
LP + ++ ++ I N VV++ G TG GK+TQLPQY+L+ + R A C+I+ TQPR+
Sbjct: 138 LPISRCKEEVISLIESNSVVIIHGATGSGKSTQLPQYVLDHYLQ--RSAYCNIVVTQPRK 195
Query: 357 ISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXGVT 416
I A +++ ++ ERG LG VGY+V LE + DT+L++ TTG+ T
Sbjct: 196 IGASSIARWISRERGWVLGGLVGYQVGLEKIATEDTKLIYMTTGVLLQKIVSAKSLVEFT 255
Query: 417 HVIVDEIHERGMNEDFLL-IVXXXXXXXXXXXXXXXMSATLNAELFSSYFG--------G 467
HV +DE+HER DFLL +V MSAT+N F+ YF
Sbjct: 256 HVFIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVVLMSATINCREFADYFAVPVQNKMSP 315
Query: 468 APMLHIPGFTYPVRAYFLENILEMTRYRLNTY 499
A + + G + + Y+L ++ + RL+ +
Sbjct: 316 AYIFEVEGKPFSIEEYYLNDLEHVHHSRLSPH 347
Score = 42 (19.8 bits), Expect = 4.2e-22, Sum P(3) = 4.2e-22
Identities = 10/44 (22%), Positives = 22/44 (50%)
Query: 624 RLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSY 667
R+ D + V + ++ NM + S TI D++ ++ + E +
Sbjct: 879 RVNVDFQKKTVDPVQVSFNMVDQSRTITDLLLTVEVTEVVEVGH 922
Score = 38 (18.4 bits), Expect = 3.0e-59, Sum P(3) = 3.0e-59
Identities = 26/94 (27%), Positives = 40/94 (42%)
Query: 890 LFLLKDAGLVDRNTENCNKWSHDEHLIRAVICAGLFPGLCSVVNKEKSIALKTMEDGQVL 949
LF L D +T + K ++HLIR L S NK + + K + G
Sbjct: 1113 LFSKSVEDLTDMSTASPVK-DDEKHLIRI-----LLESFSS--NKLGNPSCKAVLHGPFN 1164
Query: 950 LYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDS 983
Y ++ + +I V+ EK +NSV + DS
Sbjct: 1165 PYELKCHS-LTRISKFRCVWIEKESINSVIISDS 1197
Score = 38 (18.4 bits), Expect = 1.0e-22, Sum P(2) = 1.0e-22
Identities = 6/20 (30%), Positives = 15/20 (75%)
Query: 625 LIFDKPEDGVRKIVLATNMA 644
+I D PED +++++A +++
Sbjct: 1193 IISDSPEDTHQRLLVAASLS 1212
>ZFIN|ZDB-GENE-080507-1 [details] [associations]
symbol:dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide
40" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-080507-1 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421
EMBL:CR848791 EMBL:CU861501 IPI:IPI00507978
Ensembl:ENSDART00000101707 Uniprot:E7F7R7
Length = 734
Score = 358 (131.1 bits), Expect = 3.0e-59, Sum P(2) = 3.0e-59
Identities = 114/421 (27%), Positives = 204/421 (48%)
Query: 575 ERPGAVLVFMTGWDDINSLKDQL--QAHPL-----LGDPS--RVLLLACHGSMASSEQRL 625
E G +LVF+TG +I D L +A L + D S +L+L+ +GSM + +QR
Sbjct: 235 EAAGDILVFLTGQSEIEKACDLLFEKAEILDYRYDVHDRSVDGLLILSLYGSMPTDQQRQ 294
Query: 626 IFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXX 685
IF GVRK V+ATN+A TS+TI+ + +++D G K+ ++++ L ISK
Sbjct: 295 IFQPAPKGVRKCVVATNIAATSLTIDGIRYIVDSGFVKQLNHNSRVGLDILEVVPISKSE 354
Query: 686 XXXXXXXXXXVQPGECYHLYPRYVYDA-FADYQLPELLRTPLQSLCLQIKSLQLGSISEF 744
G+C+ +Y + +D +Y +PE+ RT L S+ L +K L + + F
Sbjct: 355 AQQRAGRAGRTAAGKCFRIYSKDFWDTCMPEYTIPEIQRTSLTSVILTLKCLGVHDVIRF 414
Query: 745 LSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNC 804
L PE + A++ L A+D +T LGR + P+ P L + L+ A C
Sbjct: 415 --PYLDCPEERFILTALKQLYQYDAIDRRGEVTKLGRLMVEFPLPPNLTRALLKAAALGC 472
Query: 805 LDPVMTVVAGLSVRDPFLMPF--DKKDLAESAKAQFSARD--YSDHLALVRAYDGWKDAE 860
D ++ V A LSV + F+ P +K+ AE + +A +D L L+ ++ + +E
Sbjct: 473 EDIMLPVAAMLSVENIFIRPGKPEKQKEAEVRHKEIAACSGGSNDFLMLLCVFEKCRASE 532
Query: 861 RHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDEHLIRAVI 920
+ + W ++ + ++ ++++ ++ L LK D E + S E L+R +
Sbjct: 533 NPSAWCKENWIHWRAVKSAFSVETQLREILLRLKQQK--DFPHERF-EGSRSE-LLRQCL 588
Query: 921 CAGLFPGLCSVVNKEKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFL 980
C G F + + KS VL++ +S G ++ W++F++ + + V++
Sbjct: 589 CLGYFTNVARR-SIGKSFCTMDGHGSSVLIHPSSCLFG-QELQLDWIIFHDVLVTSRVYV 646
Query: 981 R 981
R
Sbjct: 647 R 647
Score = 334 (122.6 bits), Expect = 3.0e-59, Sum P(2) = 3.0e-59
Identities = 74/195 (37%), Positives = 109/195 (55%)
Query: 295 RSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQP 354
+ LP Y+ +D L++A+ EN ++V+GETG GKTTQLPQY+ ++ +R + TQP
Sbjct: 16 KKLPIYQYKDKLVQAVEENTFLIVTGETGSGKTTQLPQYLYKAGL--SRNGRIGV--TQP 71
Query: 355 RRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXG 414
RR++A+ V++RV++E +LGE VGY+VR + +DT + + T G
Sbjct: 72 RRVAAITVAQRVSSEMQVRLGEEVGYQVRFDDCSTKDTMIKYMTDGCLLREILADPSLTQ 131
Query: 415 VTHVIVDEIHERGMNEDFLL-----IVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAP 469
+ VI+DE HER +N D LL + MSATL E SS++G P
Sbjct: 132 YSIVILDEAHERSLNTDVLLGLLKKTLLKGSRGNKTPLKVVVMSATLETEKLSSFYGNCP 191
Query: 470 MLHIPGFTYPVRAYF 484
+ IPG TYPV+ F
Sbjct: 192 VFTIPGRTYPVKETF 206
>RGD|1311165 [details] [associations]
symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box polypeptide 35"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1311165 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104241 KO:K13117
OMA:NIFVVPP CTD:60625 EMBL:CH474005 IPI:IPI00764730
RefSeq:NP_001102071.1 UniGene:Rn.118078 Ensembl:ENSRNOT00000021435
GeneID:362260 KEGG:rno:362260 UCSC:RGD:1311165 NextBio:679233
Uniprot:D4AEG5
Length = 679
Score = 412 (150.1 bits), Expect = 3.1e-59, Sum P(3) = 3.1e-59
Identities = 99/343 (28%), Positives = 176/343 (51%)
Query: 556 PDSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQL--QAHPLL--GDPSRVLL 611
PD I + V H + E G +L F+TG +++ ++ L QA L G + +
Sbjct: 255 PDYIKATVDTVVKIH--QTEGDGDILAFLTGQEEVETVVSMLIEQARALARTGMKKHLRV 312
Query: 612 LACHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALN 671
L + + S EQ +F++ VRK+++ATN+AETSITI+ +V+VIDCG K +Y+
Sbjct: 313 LPMYAGLPSFEQMKVFERVSHSVRKVIVATNVAETSITISGIVYVIDCGFMKLRAYNPRT 372
Query: 672 NTPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCL 731
CL+ +S+ + G+CY LY ++ +PE+ R+ L + L
Sbjct: 373 AIECLVVVPVSQASANQRAGRGGRNRSGKCYRLYTEEAFEQLPQSTVPEMQRSNLAPVVL 432
Query: 732 QIKSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTV-LGRNLSMLPVEP 790
Q+K+L + S+ F + PP S+ A+E L +G LD++ LT LG ++ P+ P
Sbjct: 433 QLKALGIDSVLRF--HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNP 490
Query: 791 KLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALV 850
KML+ F C ++++ A + +++ F+ P ++K A +F+ + DHL ++
Sbjct: 491 MFAKMLLESGNFGCSQEILSIAAMMQIQNVFVFPSNQKSQATRVHRKFAVEE-GDHLTML 549
Query: 851 RAYDGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLL 893
Y+ + +H ++C ++FL+ + L ++R Q LL
Sbjct: 550 NVYEAFI---KHNKSSQWCQEHFLNYKGLVRAATVRDQLKKLL 589
Score = 265 (98.3 bits), Expect = 3.1e-59, Sum P(3) = 3.1e-59
Identities = 70/205 (34%), Positives = 104/205 (50%)
Query: 294 RRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQ 353
R+ LP +K R+ +L + Q VV+ GETGCGK+TQ+PQY+ E+ A G + TQ
Sbjct: 51 RQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQVPQYLAEAGW-TAEGRVVGV--TQ 107
Query: 354 PRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGR-DTRLMFCTTGIXXXXXXXXXXX 412
PRR++A+ V+ RVA ERG LG VGY +R + TR+ F T G+
Sbjct: 108 PRRVAAVTVAGRVADERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPLL 167
Query: 413 XGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFG----GA 468
+ V++DE HER + D + + SATL+AE F +F
Sbjct: 168 TKYSVVMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNETSD 227
Query: 469 P------MLHIPGFTYPVRAYFLEN 487
P +L + G T+PV ++L++
Sbjct: 228 PARDTCVILTVEGRTFPVDIFYLQS 252
Score = 49 (22.3 bits), Expect = 3.1e-59, Sum P(3) = 3.1e-59
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 967 LVFNEKIKVNSVFLRDSTGVSDSVLL 992
+++NE I+ + ++RD T + + LL
Sbjct: 629 VIYNEVIQTSKYYMRDVTAIESAWLL 654
>MGI|MGI:2445102 [details] [associations]
symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000182 "rDNA binding" evidence=ISO;IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=ISO;IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IPI]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=ISO;IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2445102
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0000182
GO:GO:0045943 HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241
CTD:56919 OMA:APDYFRR ChiTaRS:DHX33 EMBL:AK035177 EMBL:BC052172
IPI:IPI00410764 RefSeq:NP_848144.3 UniGene:Mm.35399
ProteinModelPortal:Q80VY9 SMR:Q80VY9 PhosphoSite:Q80VY9
PRIDE:Q80VY9 Ensembl:ENSMUST00000108527 GeneID:216877
KEGG:mmu:216877 InParanoid:Q80VY9 NextBio:375442 Bgee:Q80VY9
CleanEx:MM_DHX33 Genevestigator:Q80VY9
GermOnline:ENSMUSG00000040620 Uniprot:Q80VY9
Length = 698
Score = 386 (140.9 bits), Expect = 3.3e-59, Sum P(2) = 3.3e-59
Identities = 90/325 (27%), Positives = 174/325 (53%)
Query: 572 VKKERPGA--VLVFMTGWDDINSLKD---QLQAHPLLGDPSRVLLLACHGSMASSEQRLI 626
+ +E P + +LVF+TG ++I ++ + H G PS +L+L + S+ S+Q +
Sbjct: 272 IHQEAPASQDILVFLTGQEEIEAMSKTCRDIARHLPDGCPS-MLVLPLYASLPYSQQLRV 330
Query: 627 FDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXX 686
F G RK++++TN+AETSITI + +V+D G K Y+ + L +SK
Sbjct: 331 FQGAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQA 390
Query: 687 XXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLS 746
G CY LY ++ F +PE+ R L S+ LQ+ ++++ ++ F
Sbjct: 391 WQRTGRAGREDSGICYRLYTEDEFEKFEKMTVPEIQRCNLASVILQLLAMKVPNVLTF-- 448
Query: 747 RALQPPEPLSVKNAIEYLQIIGALDENEN---LTVLGRNLSMLPVEPKLGKMLILGAIFN 803
+ P P ++ AI L ++GAL+ ++ LT +GR ++ P+EP+ K ++L + F+
Sbjct: 449 DFMSKPSPDHIEAAIAQLDLLGALEHKDDQLTLTPIGRKMAAFPLEPRFAKTILLSSKFH 508
Query: 804 CLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQ 863
C + ++T+V+ LSV P ++D +S + +F + + DH+ L+ Y +K+ ++
Sbjct: 509 CTEEILTIVSLLSVDSVLYNPPARRDEVQSVRKKFISSE-GDHITLLNIYRTFKNIGGNK 567
Query: 864 SGYEYCWKNFLSAQTLKAIDSLRKQ 888
++C +NF++++ + + +R Q
Sbjct: 568 ---DWCKENFVNSKNMLLVAEVRAQ 589
Score = 302 (111.4 bits), Expect = 3.3e-59, Sum P(2) = 3.3e-59
Identities = 73/203 (35%), Positives = 111/203 (54%)
Query: 288 QKMLEF-RRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAA 346
++ LE RRSLP ++ R LL + V+ GETG GKTTQ+PQY+ E + +G
Sbjct: 55 REALELQRRSLPIFRARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGI-SRQGI- 112
Query: 347 CSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXX 406
I TQPRR++A++++ RV+ E+ +LG+ VGY VR E + DTR+ F T G+
Sbjct: 113 --IAVTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFEDVTSEDTRIKFLTDGMLLREA 170
Query: 407 XXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXX-----XMSATLNAELF 461
+ VI+DE HER ++ D L V MSAT++ +LF
Sbjct: 171 ISDSLLRKYSCVILDEAHERTIHTDVLFGVVKTAQKRRKELGKLPLKVIVMSATMDVDLF 230
Query: 462 SSYFGGAPMLHIPGFTYPVRAYF 484
S YF AP+L++ G +P++ ++
Sbjct: 231 SQYFNRAPVLYLEGRQHPIQIFY 253
Score = 39 (18.8 bits), Expect = 1.4e-31, Sum P(2) = 1.4e-31
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 152 VVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNY 194
+V A D F Q A + L RQ+ + ++K P +Y
Sbjct: 219 IVMSATMDVDLFSQYFNRAPVLYLEGRQHPIQIFYTKQPQQDY 261
>FB|FBgn0032194 [details] [associations]
symbol:CG4901 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000390 "spliceosomal complex disassembly" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0004386
"helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AY113491
RefSeq:NP_609356.2 UniGene:Dm.10854 SMR:Q9VL25 MINT:MINT-898830
STRING:Q9VL25 EnsemblMetazoa:FBtr0079947 GeneID:34357
KEGG:dme:Dmel_CG4901 UCSC:CG4901-RA FlyBase:FBgn0032194
InParanoid:Q9VL25 OrthoDB:EOG4MW6N5 GenomeRNAi:34357 NextBio:788096
Uniprot:Q9VL25
Length = 694
Score = 410 (149.4 bits), Expect = 9.7e-59, Sum P(2) = 9.7e-59
Identities = 114/412 (27%), Positives = 209/412 (50%)
Query: 580 VLVFMTGWDDINSLKDQLQAHPLLGDPSRVLL--LACHGSMASSEQRLIFDKPEDGVRKI 637
VL+F+TG ++I SL Q++ + L + ++ +Q F VRK+
Sbjct: 284 VLIFLTGQEEIESLAQQIRQLAKIDTTGTTDLRVFTLYAQLSQGKQLECFVPTPANVRKV 343
Query: 638 VLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXXXVQ 697
+LATN+AETSITI + VIDCG KE S++ ++ L ISK
Sbjct: 344 ILATNIAETSITIPGIRCVIDCGFVKEKSFNTVDGLDVLKSVRISKAQAWQRAGRAGRDA 403
Query: 698 PGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPEPLSV 757
G CY Y + D+FAD PE+LRT S+ LQ+ +L + + F L PP +
Sbjct: 404 DGTCYRAYTKAEMDSFADATQPEILRTNPTSMVLQLLALDI-DCNNF--DFLDPPLEDGL 460
Query: 758 KNAIEYLQIIGALDENEN--LTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGL 815
++A + L +GA+ ++ +T LGR + P++PK K+L+ + F C++ ++++V+ L
Sbjct: 461 RSAYKSLDALGAIKTGDDSYITPLGRQMVQYPLDPKYSKLLLTASSFGCMEEILSLVSVL 520
Query: 816 SVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYEYCWKNFLS 875
S F+ +K ++A A A+F ++ + DHL L+ ++G+ +E+ + +C N+L+
Sbjct: 521 SSDHVFVSNSEKNEMAALAHAKFQSK-HGDHLTLLNVFNGFLKSEKPKM---WCHDNYLN 576
Query: 876 AQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDEHLIRAVICAGLFPGLCSVVNKE 935
++L ++R+Q L++ + + S D +++ I G F + +V+ ++
Sbjct: 577 LRSLTYARNVRRQ----LRE---ISEHLHLALNSSDDIEMLKKCILNGFFENI-AVLQRD 628
Query: 936 KSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVS 987
+ + + ++ +SV G K Y ++F E ++ FLR T +S
Sbjct: 629 -GFYITASGNIRSKIHPSSVLHGKYKPSY--ILFTEIVQTEQTFLRQVTEIS 677
Score = 271 (100.5 bits), Expect = 9.7e-59, Sum P(2) = 9.7e-59
Identities = 66/193 (34%), Positives = 101/193 (52%)
Query: 294 RRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQ 353
++SLP + R +LK + N V++ ETG GKTTQ+PQ++L + A+ I TQ
Sbjct: 65 QKSLPVFNCRHRILKELEANDTVLIMSETGSGKTTQIPQFLLLAGY--AKNGMIGI--TQ 120
Query: 354 PRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXX 413
PRR++A+ V+ RVA E +G++VGY VR E + R T++ F T G+
Sbjct: 121 PRRVAAITVARRVAQELNGTIGDTVGYTVRFEDVTSRATKIRFLTDGVLLRESIKDRLLL 180
Query: 414 GVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXM-----SATLNAELFSSYFGGA 468
+ +I+DE HER +N D L + + SAT++ + F +YF
Sbjct: 181 KYSVIILDEAHERTVNADLLFGIVKDAQKERRKQKLANLKVVVTSATMDIDHFGNYFNCK 240
Query: 469 PMLHIPGFTYPVR 481
M ++ G TYPVR
Sbjct: 241 GM-YLEGRTYPVR 252
Score = 46 (21.3 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 982 DSTGVSDSVLLLFGGNISRGGLVSCLIP 1009
D+TG +D + +S+G + C +P
Sbjct: 308 DTTGTTDLRVFTLYAQLSQGKQLECFVP 335
>FB|FBgn0003483 [details] [associations]
symbol:spn-E "spindle E" species:7227 "Drosophila
melanogaster" [GO:0007315 "pole plasm assembly" evidence=NAS]
[GO:0030720 "oocyte localization involved in germarium-derived egg
chamber formation" evidence=IMP] [GO:0030717 "karyosome formation"
evidence=IMP] [GO:0009951 "polarity specification of dorsal/ventral
axis" evidence=IMP] [GO:0048477 "oogenesis" evidence=IGI;TAS]
[GO:0009949 "polarity specification of anterior/posterior axis"
evidence=IMP] [GO:0007294 "germarium-derived oocyte fate
determination" evidence=IGI] [GO:0008298 "intracellular mRNA
localization" evidence=IMP;TAS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0008186 "RNA-dependent ATPase
activity" evidence=TAS] [GO:0006403 "RNA localization"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA;NAS] [GO:0003724
"RNA helicase activity" evidence=TAS] [GO:0004386 "helicase
activity" evidence=ISS] [GO:0009994 "oocyte differentiation"
evidence=NAS] [GO:0001556 "oocyte maturation" evidence=IMP]
[GO:0030423 "targeting of mRNA for destruction involved in RNA
interference" evidence=IMP] [GO:0045451 "pole plasm oskar mRNA
localization" evidence=IMP] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0007317 "regulation of pole plasm oskar
mRNA localization" evidence=IMP] [GO:0016246 "RNA interference"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0046843
"dorsal appendage formation" evidence=IMP] [GO:0010529 "negative
regulation of transposition" evidence=IMP] [GO:0043186 "P granule"
evidence=IDA] [GO:0060213 "positive regulation of
nuclear-transcribed mRNA poly(A) tail shortening" evidence=IMP]
[GO:0007076 "mitotic chromosome condensation" evidence=IMP]
InterPro:IPR001650 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 InterPro:IPR002999 EMBL:AE014297 GO:GO:0005524
GO:GO:0005634 GO:GO:0007126 GO:GO:0009949 GO:GO:0007294
GO:GO:0008270 GO:GO:0007283 GO:GO:0003676 GO:GO:0006342
GO:GO:0030423 Pfam:PF00567 SMART:SM00333 PROSITE:PS50304
GO:GO:0007076 GO:GO:0001556 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0046843 GO:GO:0030720 GO:GO:0030717
eggNOG:COG1643 GeneTree:ENSGT00700000104393 GO:GO:0060213
GO:GO:0008026 GO:GO:0045451 GO:GO:0003724 GO:GO:0043186
GO:GO:0007317 GO:GO:0008186 GO:GO:0009951 EMBL:S79915 EMBL:BT029921
EMBL:BT100306 PIR:T13889 RefSeq:NP_476741.1 UniGene:Dm.21664
ProteinModelPortal:Q9VF26 SMR:Q9VF26 STRING:Q9VF26 PaxDb:Q9VF26
PRIDE:Q9VF26 EnsemblMetazoa:FBtr0083183 GeneID:41919
KEGG:dme:Dmel_CG3158 UCSC:CG3158-RA CTD:41919 FlyBase:FBgn0003483
InParanoid:Q9VF26 OMA:INDWFTI OrthoDB:EOG4V6WXM PhylomeDB:Q9VF26
GenomeRNAi:41919 NextBio:826268 Bgee:Q9VF26 Uniprot:Q9VF26
Length = 1434
Score = 369 (135.0 bits), Expect = 1.5e-58, Sum P(2) = 1.5e-58
Identities = 110/341 (32%), Positives = 171/341 (50%)
Query: 576 RPGAVLVFMTGWDDINSLKDQLQAHPLLGDPS-RVLLLACHGSMASSEQRLIFDKPEDGV 634
R GAVL+F+ G +I+++ + L L DP+ +V ++ C M QR +F+ P G
Sbjct: 364 RYGAVLIFLPGIYEIDTMAENLTCM-LENDPNIKVSIVRCFSLMTPENQRDVFNPPPPGF 422
Query: 635 RKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXX 694
RKI+L TN+AE+SIT+ DV +VID AK D ++ L +W SK
Sbjct: 423 RKIILTTNIAESSITVPDVSYVIDFCLAKVKVTDTASSFSSLRLTWASKANCRQRAGRVG 482
Query: 695 XVQPGECYHLYPRYVYDA-FADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPE 753
++ G Y + ++ Y ++ +PE+LR PLQ+ L+ K L +GS E L+ AL PP
Sbjct: 483 RLRSGRVYRMVNKHFYQREMPEFGIPEMLRLPLQNSVLKAKVLNMGSPVEILALALSPPN 542
Query: 754 PLSVKNAIEYLQIIGAL--------DENE-NLTVLGRNLSMLPVEPKLGKMLILGAIFNC 804
+ N I L+ +GAL D + +LT G +S LP++ + +++ILG IFN
Sbjct: 543 LSDIHNTILLLKEVGALYLTVDGIYDPLDGDLTYWGTIMSRLPLDTRQSRLIILGYIFNM 602
Query: 805 LDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQ--FSARDYSDHLALVRAYDGWKD-AER 861
L+ + + AGLS F + L +S FS SD +A+ R Y + + E
Sbjct: 603 LEEAIIIAAGLSTPGLFAHEGGRSQLGDSFWMHYIFSDGSGSDLVAIWRVYLTYLNIVEN 662
Query: 862 -HQSGYEYCW-KNF-LSAQTLKAIDSLRKQFLFLLKDAGLV 899
H W K F +S ++LK I L ++ GL+
Sbjct: 663 GHDQESAIRWAKRFHVSLRSLKEIHLLVQELRVRCTHLGLI 703
Score = 327 (120.2 bits), Expect = 1.5e-58, Sum P(2) = 1.5e-58
Identities = 69/173 (39%), Positives = 102/173 (58%)
Query: 295 RSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQP 354
++L Y +R+ +L AI+ + VV++ GETGCGKTTQ+PQYIL+ ++ G C+I+ TQP
Sbjct: 113 KNLSIYAKREEILAAINAHPVVIIKGETGCGKTTQVPQYILDEAYKS--GKYCNIVVTQP 170
Query: 355 RRISAMAVSERVAAERGEKLGESVGYKVRLEGMKG-RDTRLMFCTTGIXXXXXXXXXXXX 413
RRI+A++++ RV ER + ++V L DTRL++CTTG+
Sbjct: 171 RRIAAISIANRVCQEREWQQNTVCSFQVGLHRPNSLEDTRLLYCTTGVLLNNLINNKTLT 230
Query: 414 GVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXX-MSATLNAELFSSYF 465
TH+++DE+HER N DFLLIV MSAT++A+ S YF
Sbjct: 231 HYTHIVLDEVHERDQNMDFLLIVVRRLLATNSRHVKIILMSATIDAKELSDYF 283
>UNIPROTKB|G4MKC3 [details] [associations]
symbol:MGG_02518 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:CM001231 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K13117 RefSeq:XP_003709326.1 EnsemblFungi:MGG_02518T0
GeneID:2681615 KEGG:mgr:MGG_02518 Uniprot:G4MKC3
Length = 671
Score = 407 (148.3 bits), Expect = 1.5e-58, Sum P(2) = 1.5e-58
Identities = 120/432 (27%), Positives = 206/432 (47%)
Query: 573 KKERPGAVLVFMTGWDDINSLKDQLQ---AHPLLGDPSRVLLLACHGSMASSEQRLIFDK 629
+ E G +LVF+TG D+I + D + AH L +L L +++ +Q IF++
Sbjct: 242 ENEPDGDILVFLTGRDEIEAAVDAVSERTAH-LTSQDRGLLPLPLFSGLSTEQQMYIFEE 300
Query: 630 PEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXX 689
RK++ +TN+AE S+TI+ +V+V+D G K +Y+ L ISK
Sbjct: 301 APANTRKVIFSTNIAEASVTISGIVYVVDSGFVKLRAYNPKTGIETLTAVPISKAAAAQR 360
Query: 690 XXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRAL 749
+PG+C+ LY Y + +D +PE+ R+ L LQ+K+L + ++ F
Sbjct: 361 AGRAGRTKPGKCFRLYTEESYTSLSDTNIPEVQRSNLAPFILQLKALGIDNVLHF-DFLT 419
Query: 750 QPPEPLSVKNAIEYLQIIGALDENENLTV-LGRNLSMLPVEPKLGKMLILGAIFNCLDPV 808
PP L K A+E L +GALD+ LT LG ++ L V+P + K L+ F CL +
Sbjct: 420 PPPAELMTK-ALELLYSLGALDDYAKLTKPLGLRMAELAVDPMMAKTLLSAESFGCLSEM 478
Query: 809 MTVVAGLSVR-DPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYE 867
+T+ A S D ++ ++ ES + +F+A + DHL + Y + R +SG+
Sbjct: 479 LTIAAMTSAGGDVWIQHEGERKQFESRRRKFAAGE-GDHLTFLNVYQAFVTKGRKESGF- 536
Query: 868 YCWKNFLSAQTLKAIDSLRKQFLFLLKDAGL-VDRN-----TENCNKWSHDEHLIRAVIC 921
C +N L+ +T+ S+R Q L+ G+ VD T + E IR +
Sbjct: 537 -CHENLLNYKTMSRAVSIRAQLKRYLERFGIRVDETLASGKTRGASPGVTGEQ-IRRCLT 594
Query: 922 AGLFPGLCSVVNKEKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFNEKIKVNS-VFL 980
G F + +T++ G L +++ + + W++F+E ++ + F+
Sbjct: 595 TGYF---AHAARMQADGTFQTVQGGTTL-HAHPSSLMFNR-KADWVIFHEVMETGAKTFI 649
Query: 981 RDSTGVSDSVLL 992
RD + V LL
Sbjct: 650 RDISKVEKCWLL 661
Score = 271 (100.5 bits), Expect = 1.5e-58, Sum P(2) = 1.5e-58
Identities = 74/210 (35%), Positives = 106/210 (50%)
Query: 297 LPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRR 356
LP + +D+LL + N V VV G+TG GKTTQ+PQ+ LE + G + TQPRR
Sbjct: 21 LPIARHKDSLLYVVESNPVTVVVGQTGSGKTTQIPQF-LEKAGWCSDGKLIGV--TQPRR 77
Query: 357 ISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXGVT 416
I+A V+ RVA E G ++G+ VGY +R E + TR+ F T G+ +
Sbjct: 78 IAATTVALRVAEEYGSEVGKEVGYSIRFEDVTSEATRIKFLTDGLLIREALVDPLLSRYS 137
Query: 417 HVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYF----GGA---- 468
V+VDE HER ++ D LL + SATL AE F ++F GG+
Sbjct: 138 IVMVDEAHERSVSTDILLGLLKKIRKKRPELRIIISSATLQAEQFLAFFSSTLGGSRQDR 197
Query: 469 --P------MLHIPGFTYPVRAYFLENILE 490
P ++ + G TYP+ +LE+ E
Sbjct: 198 EEPQGTIGTIVSLEGRTYPIDILYLESPAE 227
Score = 43 (20.2 bits), Expect = 1.4e-34, Sum P(2) = 1.4e-34
Identities = 16/75 (21%), Positives = 36/75 (48%)
Query: 156 AKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNY--RS-----DLDEKRPQREVI 208
+++DR E + T + L R Y +++ ++P +Y R+ D+ E P +++
Sbjct: 193 SRQDRE--EPQGTIGTIVSLEGRTYPIDILYLESPAEDYLQRAVSTVLDVHENEPDGDIL 250
Query: 209 LPFGLLREVDAHLKA 223
+ E++A + A
Sbjct: 251 VFLTGRDEIEAAVDA 265
>UNIPROTKB|Q9H6R0 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0000182
"rDNA binding" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CH471108 GO:GO:0005654
GO:GO:0005730 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0000182 GO:GO:0045943 HOVERGEN:HBG039428
EMBL:AK025625 EMBL:AK026944 EMBL:AK295074 EMBL:AC004148
EMBL:BC030017 EMBL:CR936655 IPI:IPI00302860 IPI:IPI00655950
RefSeq:NP_001186628.1 RefSeq:NP_064547.2 UniGene:Hs.250456
ProteinModelPortal:Q9H6R0 SMR:Q9H6R0 IntAct:Q9H6R0
PhosphoSite:Q9H6R0 DMDM:296434478 PRIDE:Q9H6R0
Ensembl:ENST00000225296 GeneID:56919 KEGG:hsa:56919 UCSC:uc002gbz.3
CTD:56919 GeneCards:GC17M005360 HGNC:HGNC:16718 MIM:614405
neXtProt:NX_Q9H6R0 PharmGKB:PA27220 InParanoid:Q9H6R0 OMA:APDYFRR
OrthoDB:EOG46Q6S1 PhylomeDB:Q9H6R0 ChiTaRS:DHX33 GenomeRNAi:56919
NextBio:62420 ArrayExpress:Q9H6R0 Bgee:Q9H6R0 CleanEx:HS_DHX33
Genevestigator:Q9H6R0 GermOnline:ENSG00000005100 Uniprot:Q9H6R0
Length = 707
Score = 371 (135.7 bits), Expect = 7.2e-58, Sum P(2) = 7.2e-58
Identities = 86/325 (26%), Positives = 172/325 (52%)
Query: 572 VKKERPGA--VLVFMTGWDDINSLKD---QLQAHPLLGDPSRVLLLACHGSMASSEQRLI 626
+ +E P + +LVF+TG ++I ++ + H G P+ +L+L + S+ ++Q +
Sbjct: 281 IHQEAPSSQDILVFLTGQEEIEAMSKTCRDIAKHLPDGCPA-MLVLPLYASLPYAQQLRV 339
Query: 627 FDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXX 686
F G RK++++TN+AETSITI + +V+D G K Y+ + L +SK
Sbjct: 340 FQGAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQA 399
Query: 687 XXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLS 746
G CY LY ++ F +PE+ R L S+ LQ+ ++++ ++ F
Sbjct: 400 WQRTGRAGREDSGICYRLYTEDEFEKFDKMTVPEIQRCNLASVMLQLLAMKVPNVLTF-- 457
Query: 747 RALQPPEPLSVKNAIEYLQIIGALDENEN---LTVLGRNLSMLPVEPKLGKMLILGAIFN 803
+ P P ++ AI L ++GAL+ ++ LT +GR ++ P+EPK K +++ F+
Sbjct: 458 DFMSKPSPDHIQAAIAQLDLLGALEHKDDQLTLTPMGRKMAAFPLEPKFAKTILMSPKFH 517
Query: 804 CLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQ 863
C + ++T+V+ LSV P +++ + + +F + + DH+ L+ Y +K+ ++
Sbjct: 518 CTEEILTIVSLLSVDSVLHNPPSRREEVQGVRKKFISSE-GDHMTLLNIYRTFKNLGGNK 576
Query: 864 SGYEYCWKNFLSAQTLKAIDSLRKQ 888
++C +NF++++ + + +R Q
Sbjct: 577 ---DWCKENFVNSKNMTLVAEVRAQ 598
Score = 306 (112.8 bits), Expect = 7.2e-58, Sum P(2) = 7.2e-58
Identities = 71/196 (36%), Positives = 108/196 (55%)
Query: 294 RRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQ 353
RRSLP ++ R LL + V+ GETG GKTTQ+PQY+ E + +G I TQ
Sbjct: 71 RRSLPIFQARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGI-SRQGI---IAVTQ 126
Query: 354 PRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXX 413
PRR++A++++ RV+ E+ +LG+ VGY VR + + DTR+ F T G+
Sbjct: 127 PRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSEDTRIKFLTDGMLLREAISDSLLR 186
Query: 414 GVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXX-----XMSATLNAELFSSYFGGA 468
+ VI+DE HER ++ D L V MSAT++ +LFS YF GA
Sbjct: 187 KYSCVILDEAHERTIHTDVLFGVVKAAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNGA 246
Query: 469 PMLHIPGFTYPVRAYF 484
P+L++ G +P++ ++
Sbjct: 247 PVLYLEGRQHPIQVFY 262
Score = 37 (18.1 bits), Expect = 1.3e-29, Sum P(2) = 1.3e-29
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 152 VVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNY 194
+V A D F Q A + L RQ+ V ++K P +Y
Sbjct: 228 IVMSATMDVDLFSQYFNGAPVLYLEGRQHPIQVFYTKQPQNDY 270
>SGD|S000004735 [details] [associations]
symbol:ECM16 "Essential DEAH-box ATP-dependent RNA helicase
specific to U3 snoRNP" species:4932 "Saccharomyces cerevisiae"
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0042254 "ribosome biogenesis"
evidence=IEA;IDA;TAS] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0030686 "90S
preribosome" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000004735 GO:GO:0005739 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 EMBL:BK006946 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0030686 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0032040 GO:GO:0008026
GO:GO:0003724 GO:GO:0000462 EMBL:Z48622 PIR:S53058
RefSeq:NP_013847.1 ProteinModelPortal:Q04217 SMR:Q04217
DIP:DIP-6722N IntAct:Q04217 MINT:MINT-614026 STRING:Q04217
PaxDb:Q04217 PeptideAtlas:Q04217 PRIDE:Q04217 EnsemblFungi:YMR128W
GeneID:855158 KEGG:sce:YMR128W CYGD:YMR128w
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:HQLKREE OrthoDB:EOG4KM2B8 NextBio:978575 Genevestigator:Q04217
GermOnline:YMR128W Uniprot:Q04217
Length = 1267
Score = 385 (140.6 bits), Expect = 1.4e-57, Sum P(4) = 1.4e-57
Identities = 81/223 (36%), Positives = 126/223 (56%)
Query: 605 DPSRVLLLACHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKE 664
DP VL L + + + EQ +F KP G R ++ATN+AETS+TI V +V+D G++KE
Sbjct: 727 DPLYVLPL--YSLLPTKEQMRVFQKPPQGSRLCIVATNVAETSLTIPGVRYVVDSGRSKE 784
Query: 665 TSYDALNNTPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDA-FADYQLPELLR 723
Y+ N W+SK PG CY LY V++ F + PE+LR
Sbjct: 785 RKYNESNGVQSFEVGWVSKASANQRSGRAGRTGPGHCYRLYSSAVFEHDFEQFSKPEILR 844
Query: 724 TPLQSLCLQIKSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNL 783
P++S+ LQ+KS+ + +I F PP+ +++ AI+ LQ +GALD E +T G+ +
Sbjct: 845 MPVESIVLQMKSMAIHNIINFPFPT--PPDRVALSKAIQLLQYLGALDNKEMITEDGKKM 902
Query: 784 SMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFD 826
S+ P+ P+ KML++ CL ++ +V+ LSV DPF+ F+
Sbjct: 903 SLFPLSPRFSKMLLVSDEKACLPYIVAIVSALSVGDPFINEFE 945
Score = 255 (94.8 bits), Expect = 1.4e-57, Sum P(4) = 1.4e-57
Identities = 54/154 (35%), Positives = 87/154 (56%)
Query: 283 ESPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESE--TE 340
E ++ + R LP + E +++AI N VV++ GETG GKTTQ+PQ++ E+ E
Sbjct: 377 EVSRSDEIQKARIQLPVFGEEHKIMEAIHHNDVVIICGETGSGKTTQVPQFLYEAGFGAE 436
Query: 341 AARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTG 400
+ + TQPRR++A++++ERVA E G+ G VGY++R + DT++ F T G
Sbjct: 437 DSPDYPGMVGITQPRRVAAVSMAERVANELGDH-GHKVGYQIRFDSTAKEDTKVKFMTDG 495
Query: 401 IXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLL 434
+ + +I+DE HER +N D L+
Sbjct: 496 VLLREMMHDFKLTKYSSIIIDEAHERNINTDILI 529
Score = 74 (31.1 bits), Expect = 1.4e-57, Sum P(4) = 1.4e-57
Identities = 23/79 (29%), Positives = 39/79 (49%)
Query: 820 PFLMPFDKKDLAES---AKAQFSARD-YSDHLALVRAYDGWKDAERHQSGYEYCWKNFLS 875
P + P KK+L +++QFS D +SD L+ + Q + KNFL
Sbjct: 973 PGMDPELKKELRSKFYKSRSQFSKLDKFSDVFRLLSVVSAMDYVPKEQKEI-FMKKNFLR 1031
Query: 876 AQTLKAIDSLRKQFLFLLK 894
+ ++ I LRKQ ++++K
Sbjct: 1032 GKLMEEIVKLRKQLMYIIK 1050
Score = 65 (27.9 bits), Expect = 1.4e-57, Sum P(4) = 1.4e-57
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 569 CHIVKKERPGAVLVFMTGWDDINSLKDQLQ 598
C I +K PGA+LVF+TG +I + +L+
Sbjct: 611 CKIHQKLPPGAILVFLTGQQEITHMVKRLR 640
>UNIPROTKB|E1C094 [details] [associations]
symbol:E1C094 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AADN02054197 EMBL:AADN02054196
IPI:IPI00591998 Ensembl:ENSGALT00000001141 Uniprot:E1C094
Length = 1164
Score = 394 (143.8 bits), Expect = 2.4e-57, Sum P(3) = 2.4e-57
Identities = 111/359 (30%), Positives = 180/359 (50%)
Query: 132 NIDEWRWKLTMLLRNKDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKV---VVFSK 188
N D RW+ +L + VV R + D DFE+ ++ + +H+ + +VF+K
Sbjct: 374 NEDNERWETNRMLTSG----VVHRIEVDE-DFEEDNSAKVHLLVHNLVPPFLDGRIVFTK 428
Query: 189 APLPNYRSDLDEKRPQREVILPFG--LLREVDAHLKAYLSQ-KYINASMSSLSNVGSTTN 245
P P + + +I G L+R+ + +Q K+ + + L ++
Sbjct: 429 QPEPVI--PVKDATSDLAIIARKGSQLVRKHREQKERKRAQHKHWELAGTKLGDIMGIKK 486
Query: 246 DEGLYEQQEQLVQNSVVRERILRQRSLQMHEKQQAWQESPEGQKMLEFRRSLPSYKERDA 305
+E E+ E + ++ V R ++ + M EK +A E + + +LE R+ LP + +
Sbjct: 487 EE---EKDEMVTEDGKVDYRTEQKFAEHMKEKSEARSEFAKKKSILEQRQYLPIFAVQQE 543
Query: 306 LLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAVSER 365
LL + +N +V+V GETG GKTTQL QY+ E + G I CTQPRR++AM+V++R
Sbjct: 544 LLSILRDNSIVIVVGETGSGKTTQLTQYLHE-DGYTDYGM---IGCTQPRRVAAMSVAKR 599
Query: 366 VAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHE 425
V+ E G +LGE VGY +R E +T + + T GI + +I+DE HE
Sbjct: 600 VSEEMGVRLGEEVGYAIRFEDCTSENTIIKYMTDGILLRESLREADLDNYSAIIMDEAHE 659
Query: 426 RGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYF 484
R +N D L + SAT++A+ F+S+FG P+ HIPG T+PV F
Sbjct: 660 RSLNTDVLFGLLREVVARRSDLKLVVTSATMDADKFASFFGNVPIFHIPGRTFPVDILF 718
Score = 171 (65.3 bits), Expect = 2.4e-57, Sum P(3) = 2.4e-57
Identities = 37/88 (42%), Positives = 53/88 (60%)
Query: 577 PGAVLVFMTGWDDINSLKDQLQAH-PLLGDPSRVLLLACHGSMASSEQRLIFDKPEDGVR 635
PG +LVFM G +DI +Q+ H L + +L + + S Q IF K DGVR
Sbjct: 743 PGDILVFMPGQEDIEVTSEQIVEHLEELEKAPALAVLPIYSQLPSDLQAKIFQKAPDGVR 802
Query: 636 KIVLATNMAETSITINDVVFVIDCGKAK 663
K ++ATN+AETS+T++ ++FVID G K
Sbjct: 803 KCIVATNIAETSLTVDGIMFVIDSGYCK 830
Score = 164 (62.8 bits), Expect = 2.4e-57, Sum P(3) = 2.4e-57
Identities = 56/224 (25%), Positives = 102/224 (45%)
Query: 776 LTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAK 835
LT GR + P++P L KMLI+ C ++ +V+ LSV F P +++ ++ +
Sbjct: 876 LTSTGRQMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQVR 935
Query: 836 AQFSARDYSDHLALVRAYDGWKDAERHQSGYEYCWKN--FLSAQTLKAIDSLRKQFLFLL 893
+F+ + SDHL + Y WK+ + Y W N F+ A+ ++ + +R Q L
Sbjct: 936 EKFAVPE-SDHLTYLNVYLQWKN-----NNYSTLWCNQHFIHAKAMRKVREVRAQ----L 985
Query: 894 KDAGLVDR-NTENCNKWSHDEHLIRAVICAGLFPGLCSVVNKEKSIALKTMEDGQVL-LY 951
KD + R + +C D ++R ICA F + + + ++T G L+
Sbjct: 986 KDIMVQQRMSLASCGT---DWDVVRKCICAAYFHQAAKLKGIGEYVNIRT---GMPCHLH 1039
Query: 952 SNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVSDSVLLLFG 995
S G+ P ++V++E + +++ T V L G
Sbjct: 1040 PTSSLFGMGYTP-DYIVYHELVMTTKEYMQCVTAVDGEWLAELG 1082
Score = 45 (20.9 bits), Expect = 7.2e-20, Sum P(3) = 7.2e-20
Identities = 13/53 (24%), Positives = 22/53 (41%)
Query: 142 MLLRNKDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNY 194
++ R D + VV+ A D F + R + ++FSK P +Y
Sbjct: 674 VVARRSDLKLVVTSATMDADKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDY 726
Score = 38 (18.4 bits), Expect = 3.8e-19, Sum P(3) = 3.8e-19
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 187 SKAPLPNYRSDLDEKRPQREV 207
S +P P+YR R R++
Sbjct: 231 SPSPTPSYRDSERSHRASRDI 251
>UNIPROTKB|F1NY80 [details] [associations]
symbol:F1NY80 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
EMBL:AADN02054197 EMBL:AADN02054196 IPI:IPI00821409
Ensembl:ENSGALT00000038723 Uniprot:F1NY80
Length = 1170
Score = 394 (143.8 bits), Expect = 2.5e-57, Sum P(3) = 2.5e-57
Identities = 111/359 (30%), Positives = 180/359 (50%)
Query: 132 NIDEWRWKLTMLLRNKDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKV---VVFSK 188
N D RW+ +L + VV R + D DFE+ ++ + +H+ + +VF+K
Sbjct: 377 NEDNERWETNRMLTSG----VVHRIEVDE-DFEEDNSAKVHLLVHNLVPPFLDGRIVFTK 431
Query: 189 APLPNYRSDLDEKRPQREVILPFG--LLREVDAHLKAYLSQ-KYINASMSSLSNVGSTTN 245
P P + + +I G L+R+ + +Q K+ + + L ++
Sbjct: 432 QPEPVI--PVKDATSDLAIIARKGSQLVRKHREQKERKRAQHKHWELAGTKLGDIMGIKK 489
Query: 246 DEGLYEQQEQLVQNSVVRERILRQRSLQMHEKQQAWQESPEGQKMLEFRRSLPSYKERDA 305
+E E+ E + ++ V R ++ + M EK +A E + + +LE R+ LP + +
Sbjct: 490 EE---EKDEMVTEDGKVDYRTEQKFAEHMKEKSEARSEFAKKKSILEQRQYLPIFAVQQE 546
Query: 306 LLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAVSER 365
LL + +N +V+V GETG GKTTQL QY+ E + G I CTQPRR++AM+V++R
Sbjct: 547 LLSILRDNSIVIVVGETGSGKTTQLTQYLHE-DGYTDYGM---IGCTQPRRVAAMSVAKR 602
Query: 366 VAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHE 425
V+ E G +LGE VGY +R E +T + + T GI + +I+DE HE
Sbjct: 603 VSEEMGVRLGEEVGYAIRFEDCTSENTIIKYMTDGILLRESLREADLDNYSAIIMDEAHE 662
Query: 426 RGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYF 484
R +N D L + SAT++A+ F+S+FG P+ HIPG T+PV F
Sbjct: 663 RSLNTDVLFGLLREVVARRSDLKLVVTSATMDADKFASFFGNVPIFHIPGRTFPVDILF 721
Score = 171 (65.3 bits), Expect = 2.5e-57, Sum P(3) = 2.5e-57
Identities = 37/88 (42%), Positives = 53/88 (60%)
Query: 577 PGAVLVFMTGWDDINSLKDQLQAH-PLLGDPSRVLLLACHGSMASSEQRLIFDKPEDGVR 635
PG +LVFM G +DI +Q+ H L + +L + + S Q IF K DGVR
Sbjct: 746 PGDILVFMPGQEDIEVTSEQIVEHLEELEKAPALAVLPIYSQLPSDLQAKIFQKAPDGVR 805
Query: 636 KIVLATNMAETSITINDVVFVIDCGKAK 663
K ++ATN+AETS+T++ ++FVID G K
Sbjct: 806 KCIVATNIAETSLTVDGIMFVIDSGYCK 833
Score = 164 (62.8 bits), Expect = 2.5e-57, Sum P(3) = 2.5e-57
Identities = 56/224 (25%), Positives = 102/224 (45%)
Query: 776 LTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAK 835
LT GR + P++P L KMLI+ C ++ +V+ LSV F P +++ ++ +
Sbjct: 882 LTSTGRQMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQVR 941
Query: 836 AQFSARDYSDHLALVRAYDGWKDAERHQSGYEYCWKN--FLSAQTLKAIDSLRKQFLFLL 893
+F+ + SDHL + Y WK+ + Y W N F+ A+ ++ + +R Q L
Sbjct: 942 EKFAVPE-SDHLTYLNVYLQWKN-----NNYSTLWCNQHFIHAKAMRKVREVRAQ----L 991
Query: 894 KDAGLVDR-NTENCNKWSHDEHLIRAVICAGLFPGLCSVVNKEKSIALKTMEDGQVL-LY 951
KD + R + +C D ++R ICA F + + + ++T G L+
Sbjct: 992 KDIMVQQRMSLASCGT---DWDVVRKCICAAYFHQAAKLKGIGEYVNIRT---GMPCHLH 1045
Query: 952 SNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVSDSVLLLFG 995
S G+ P ++V++E + +++ T V L G
Sbjct: 1046 PTSSLFGMGYTP-DYIVYHELVMTTKEYMQCVTAVDGEWLAELG 1088
Score = 45 (20.9 bits), Expect = 7.3e-20, Sum P(3) = 7.3e-20
Identities = 13/53 (24%), Positives = 22/53 (41%)
Query: 142 MLLRNKDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNY 194
++ R D + VV+ A D F + R + ++FSK P +Y
Sbjct: 677 VVARRSDLKLVVTSATMDADKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDY 729
Score = 38 (18.4 bits), Expect = 3.8e-19, Sum P(3) = 3.8e-19
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 187 SKAPLPNYRSDLDEKRPQREV 207
S +P P+YR R R++
Sbjct: 234 SPSPTPSYRDSERSHRASRDI 254
>UNIPROTKB|F1PRA1 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045943 "positive regulation of transcription
from RNA polymerase I promoter" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000182 "rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AAEX03003580
Ensembl:ENSCAFT00000024626 Uniprot:F1PRA1
Length = 616
Score = 381 (139.2 bits), Expect = 5.4e-56, Sum P(2) = 5.4e-56
Identities = 90/325 (27%), Positives = 170/325 (52%)
Query: 572 VKKERPGA--VLVFMTGWDDINSLKD---QLQAHPLLGDPSRVLLLACHGSMASSEQRLI 626
+ +E P + +LVF+TG ++I ++ + H G PS +L+L + S+ ++Q +
Sbjct: 190 IHQEAPSSQDILVFLTGQEEIEAVSKTCRDIAKHLPDGCPS-MLVLPLYASLPYAQQLRV 248
Query: 627 FDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXX 686
F G RK+++ATN+AETSITI + +V+D G K Y+ + L +SK
Sbjct: 249 FQGAPKGCRKVIIATNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQA 308
Query: 687 XXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLS 746
G CY LY ++ F +PE+ R L S+ LQ+ ++++ ++ F
Sbjct: 309 WQRAGRAGREDSGICYRLYTENEFEKFEKMTVPEIQRCNLASVLLQLLAMKVPNVLTF-- 366
Query: 747 RALQPPEPLSVKNAIEYLQIIGALDENEN---LTVLGRNLSMLPVEPKLGKMLILGAIFN 803
+ P P ++ A+ L ++GAL+ +N LT +GR ++ P+EPK K ++L F+
Sbjct: 367 DFMSKPSPDHMQAAVAQLDLLGALERKDNQLTLTPIGRKMAAFPLEPKFAKTILLSPKFH 426
Query: 804 CLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQ 863
C + ++T+V+ LSV P ++D ++ + +F + + DH+ L+ Y +K +
Sbjct: 427 CTEEILTIVSLLSVDSVLYNPPSRRDEVQAMRKKFLSSE-GDHITLLNIYRTFKSLGGDK 485
Query: 864 SGYEYCWKNFLSAQTLKAIDSLRKQ 888
++C +NF++++ + +R Q
Sbjct: 486 ---DWCRENFVNSRNMMLAAEVRAQ 507
Score = 272 (100.8 bits), Expect = 5.4e-56, Sum P(2) = 5.4e-56
Identities = 62/172 (36%), Positives = 94/172 (54%)
Query: 318 VSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGES 377
+SGETG GKTTQLPQY+ E G I TQPRR++A++++ RV+ E+ +LG+
Sbjct: 4 LSGETGSGKTTQLPQYLYEGGI----GRQGVIAVTQPRRVAAISLATRVSDEKRTELGKL 59
Query: 378 VGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVX 437
VGY VR + + DTR+ F T G+ + +I+DE HER ++ D L V
Sbjct: 60 VGYTVRFDDVSSEDTRIKFLTDGMLLREAISDSLLRKYSCIILDEAHERTVHTDVLFGVV 119
Query: 438 XXXXXXXXXXXXX-----XMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYF 484
MSAT++ +LFS YF GA +L++ G +P++ ++
Sbjct: 120 KAAQRRRKELRKLPLKVIVMSATMDVDLFSQYFNGASVLYLEGRQHPIQVFY 171
Score = 42 (19.8 bits), Expect = 7.8e-32, Sum P(2) = 7.8e-32
Identities = 15/51 (29%), Positives = 23/51 (45%)
Query: 144 LRNKDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYAKVVVFSKAPLPNY 194
LR + +V A D F Q A+ + L RQ+ V ++K P +Y
Sbjct: 129 LRKLPLKVIVMSATMDVDLFSQYFNGASVLYLEGRQHPIQVFYTKQPQQDY 179
>SGD|S000005294 [details] [associations]
symbol:PRP2 "RNA-dependent ATPase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=IDA] [GO:0071006 "U2-type catalytic step 1
spliceosome" evidence=IMP;IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0000349 "generation of catalytic spliceosome for
first transesterification step" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000005294
GO:GO:0005524 GO:GO:0005634 EMBL:BK006947 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:X77395
GO:GO:0000349 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
OrthoDB:EOG4SBJ63 GO:GO:0008186 EMBL:X55936 EMBL:X55999 EMBL:Z71626
PIR:S12334 RefSeq:NP_014408.1 ProteinModelPortal:P20095 SMR:P20095
DIP:DIP-3961N IntAct:P20095 MINT:MINT-496813 STRING:P20095
PaxDb:P20095 EnsemblFungi:YNR011C GeneID:855745 KEGG:sce:YNR011C
CYGD:YNR011c KO:K12814 OMA:DDKIHIN NextBio:980148
Genevestigator:P20095 GermOnline:YNR011C Uniprot:P20095
Length = 876
Score = 345 (126.5 bits), Expect = 1.6e-55, Sum P(2) = 1.6e-55
Identities = 94/337 (27%), Positives = 172/337 (51%)
Query: 577 PGAVLVFMTGWDDINSLKDQLQA-HPLLGDPSRVLLLA-CHGSMASSEQRLIFDKPEDGV 634
PG +LVF+TG ++I K +L+ LG ++ +++ + ++ +Q IF +
Sbjct: 435 PGDILVFLTGQEEIERTKTKLEEIMSKLGSRTKQMIITPIYANLPQEQQLKIFQPTPENC 494
Query: 635 RKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXX 694
RK+VLATN+AETS+TI+ + +VID G KE SY LL S+
Sbjct: 495 RKVVLATNIAETSLTIDGIRYVIDPGFVKENSYVPSTGMTQLLTVPCSRASVDQRAGRAG 554
Query: 695 XVQPGECYHLYPRYVYDAFADYQL---PELLRTPLQSLCLQIKSLQLGSISEFLSRALQP 751
V PG+C+ ++ ++ Y + +L PE+ RT L + L + SL + + +F +
Sbjct: 555 RVGPGKCFRIFTKWSY--LHELELMPKPEITRTNLSNTVLLLLSLGVTDLIKF--PLMDK 610
Query: 752 PEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFN-C---LDP 807
P +++ ++E L I+GAL+ +T LG+ + P EP+ K+L A C L+
Sbjct: 611 PSIPTLRKSLENLYILGALNSKGTITRLGKMMCEFPCEPEFAKVLYTAATHEQCQGVLEE 670
Query: 808 VMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYE 867
+T+V+ L P L K+D A S ++ SDH+ + ++ W++++ +S
Sbjct: 671 CLTIVSMLH-ETPSLFIGQKRDAAASVLSEVE----SDHILYLEIFNQWRNSKFSRS--- 722
Query: 868 YCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTE 904
+C + + +T+ + ++R Q + GLV++N +
Sbjct: 723 WCQDHKIQFKTMLRVRNIRNQLFRCSEKVGLVEKNDQ 759
Score = 316 (116.3 bits), Expect = 1.6e-55, Sum P(2) = 1.6e-55
Identities = 77/224 (34%), Positives = 122/224 (54%)
Query: 266 ILRQRSLQMHEKQQAWQESPEGQKML---EFRRSLPSYKERDALLKAISENQVVVVSGET 322
+L + LQ +E + A E +++L E R+ LP ++ +D LL+ I +NQV+++ GET
Sbjct: 190 LLPEEKLQ-YEARLAQALETEEKRILTIQEARKLLPVHQYKDELLQEIKKNQVLIIMGET 248
Query: 323 GCGKTTQLPQYILESE-TEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYK 381
G GKTTQLPQY++E T+ + I TQPRR++A +V+ RVA E LG+ VGY+
Sbjct: 249 GSGKTTQLPQYLVEDGFTDQGK---LQIAITQPRRVAATSVAARVADEMNVVLGKEVGYQ 305
Query: 382 VRLEGMKGRD-TRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXX 440
+R E + T L + T G+ + +++DE HER + D L+ +
Sbjct: 306 IRFEDKTTPNKTVLKYMTDGMLLREFLTDSKLSKYSCIMIDEAHERTLATDILIGLLKDI 365
Query: 441 XXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYF 484
SAT+NA+ FS +F P+ ++PG YPV ++
Sbjct: 366 LPQRPTLKLLISSATMNAKKFSEFFDNCPIFNVPGRRYPVDIHY 409
Score = 48 (22.0 bits), Expect = 2.2e-27, Sum P(2) = 2.2e-27
Identities = 15/70 (21%), Positives = 33/70 (47%)
Query: 489 LEMTRYRLNTYNQIDDYGQEKSWKMQKQALALRKRKSSIASAVED-ALEAADFREYSVQT 547
+E+T +++ +ID +++ W+ Q+ LR + + +D LE +D +Y T
Sbjct: 123 VEVT-HKIKNAKEIDKINRQRMWEEQQ----LRNAMAGQSDHPDDITLEGSDKYDYVFDT 177
Query: 548 QQSLSCWNPD 557
+ N +
Sbjct: 178 DAMIDYTNEE 187
>CGD|CAL0002969 [details] [associations]
symbol:orf19.107 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0002969 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14781 EMBL:AACQ01000106 RefSeq:XP_714316.1
GeneID:3644014 KEGG:cal:CaO19.107 Uniprot:Q59XP9
Length = 831
Score = 363 (132.8 bits), Expect = 1.1e-54, Sum P(2) = 1.1e-54
Identities = 78/211 (36%), Positives = 121/211 (57%)
Query: 278 QQAWQESPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILES 337
Q ++Q + Q++L+ R LP Y +D +++ I+ NQV +V GETG GK+TQ+PQ+++
Sbjct: 163 QNSFQLAATAQQLLQIREKLPIYHHKDKIIEYINNNQVTIVIGETGSGKSTQIPQFLMPE 222
Query: 338 ETEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFC 397
+ I TQPRR++A +++ RV+ E G KLG+ VGY+VR M R T+L +
Sbjct: 223 NPKM-------IGVTQPRRVAAASLAARVSEEYGCKLGQDVGYQVRFTNMTNRQTKLKYL 275
Query: 398 TTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLL--IVXXXXXXXXXXXXXXXMSAT 455
T G+ + +I+DE HER + D ++ + MSAT
Sbjct: 276 TDGMLLREIMLDSNLTKYSTIILDEAHERTILTDLIMGFLKQIITSGKRKDLKIVVMSAT 335
Query: 456 LNAELFSSYFGGAPMLHIPGFTYPVRAYFLE 486
LNAELFS++FG AP+L+I G YPV ++L+
Sbjct: 336 LNAELFSNFFGNAPILYIEGKMYPVSQFYLD 366
Score = 288 (106.4 bits), Expect = 1.1e-54, Sum P(2) = 1.1e-54
Identities = 93/339 (27%), Positives = 170/339 (50%)
Query: 557 DSIGFNLIEHVLCHIVK---KERPGAVLVFMTGWDDI-NSLKDQLQAHPLLGDPSRVLL- 611
D+ ++++ ++ I++ E G VL F+ G ++I N +K Q P L + +++
Sbjct: 366 DAESEDIVDTMIRSIIQINLNEPEGDVLCFLPGQEEIDNCVKSLEQLAPQLPREAPLIVP 425
Query: 612 LACHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALN 671
L + +++ +Q IF+K G RK++LATN+AETSIT++ V +VID G K +
Sbjct: 426 LPLYAALSPGQQSKIFEKLPKGRRKVILATNIAETSITVSGVKYVIDSGLRKIKVWKHNL 485
Query: 672 NTPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCL 731
LL + IS+ G+ + LYP Y A Q E+ R + L
Sbjct: 486 GLSTLLTTPISQASARQRAGRAGRESEGKVFRLYPESTYMALPKQQESEIKRNDIILPVL 545
Query: 732 QIKSLQLGSISEFLSRA-LQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEP 790
+K L + + L+ + L+ P ++ +A+ L +GAL+++ +T LG +S+LP+ P
Sbjct: 546 TLKKL---GVDDLLNWSWLEYPGQDAILSALNTLYTLGALNDSGKVTTLGYKMSILPLPP 602
Query: 791 KLGKMLILGAIFNCLDPVMTVVAGLSVRDPFL-MPFDKKDLAESAKAQFSARDYSDHLAL 849
+L +LI A F L PV+ + + LSV + + + +D + Q + H L
Sbjct: 603 QLSVVLITAAEFGVLSPVIDIASCLSVDNLITNVTGEARDEINFKRRQHCPLG-NIHGDL 661
Query: 850 VRAYDGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQ 888
+ Y+ ++ A + Q G E+C + S + K ++ ++ Q
Sbjct: 662 IALYEYFQ-AYQAQ-GKEWCKELAFSFKGFKNVEKIKYQ 698
Score = 44 (20.5 bits), Expect = 8.2e-21, Sum P(2) = 8.2e-21
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 271 SLQMHEKQQAWQESPEGQKM-LEFRRSLPSYKERD 304
+L +Q+ Q S K LEF+R YK++D
Sbjct: 114 NLPTRTQQEKHQHSKNKFKQKLEFKRKTVVYKDQD 148
>UNIPROTKB|Q8EEY1 [details] [associations]
symbol:hrpA "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 353 (129.3 bits), Expect = 1.6e-54, Sum P(2) = 1.6e-54
Identities = 101/333 (30%), Positives = 167/333 (50%)
Query: 541 REYSVQTQQSLSCWNPDSIGFNLIEHVLCHI--VKKERPGAVLVFMTGWDDINSLKDQLQ 598
R Y V+T+ + ++ + IE + + + E G +L+FM G +I +QL
Sbjct: 251 RTYPVETRYRPLVQDTEA-DLDQIEGIFAAVDELVAEGLGDILIFMNGEREIRDTAEQLN 309
Query: 599 AHPLLGDPSRVLLLACHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVID 658
D +L + ++ EQ +F G R+IVLATN+AETS+T+ + +VID
Sbjct: 310 RRNYR-DTE---ILPLYARLSYGEQSKVFSS-HTG-RRIVLATNVAETSLTVPGIRYVID 363
Query: 659 CGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQL 718
G A+ + Y L IS+ V PG C LY ++ +
Sbjct: 364 PGTARISRYSYRTKVQRLPIEPISQASANQRQGRCGRVGPGICIRLYDEADFNNRPAFTD 423
Query: 719 PELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPEPLSVKNA---IEYLQIIGALDENEN 775
PE+LRT L S+ LQ+ ++ LG I+ F ++PP+P +++ +E LQ + N
Sbjct: 424 PEILRTNLASVILQMLAIGLGDIAAF--PFIEPPDPRHIRDGFLLLEELQAVKQQKGNIV 481
Query: 776 LTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAK 835
LT LGR LS +PV+P+L +M+I CL+ V+ + +GLS++DP P DKK ++ A
Sbjct: 482 LTPLGRQLSQIPVDPRLARMVIESHQLGCLNEVLVIASGLSIQDPRERPMDKKQASDEAH 541
Query: 836 AQFSARDYSDHLALVRAYDGWKDAERHQSGYEY 868
+F A SD ++ V + K+ ++ S ++
Sbjct: 542 RRF-ADPQSDFVSWVNLWQHLKEQQKELSASQF 573
Score = 304 (112.1 bits), Expect = 1.6e-54, Sum P(2) = 1.6e-54
Identities = 79/220 (35%), Positives = 112/220 (50%)
Query: 269 QRSLQMHEKQQAWQESPE----GQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGC 324
Q ++ E+ QA E E + + + +LP R+ + KAIS NQVV+++GETG
Sbjct: 44 QELAKLAEQAQAAFEKVEQRLKARPRINYPDNLPVSGMREDIAKAISANQVVIIAGETGS 103
Query: 325 GKTTQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRL 384
GKTTQLP+ LE +RG I TQPRR++A +V+ RVA E LGE VG+KVR
Sbjct: 104 GKTTQLPKICLELGL-GSRGF---IGHTQPRRLAARSVASRVAEELQSPLGEVVGFKVRF 159
Query: 385 EGMKGRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXX 444
++ + T GI +I+DE HER +N DF+L
Sbjct: 160 ADALKSESYIKLMTDGILLAELTSDRYLDQYDTIIIDEAHERSLNIDFILGYLKQILKKR 219
Query: 445 XXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYF 484
SAT++ E FS +F AP++ + G TYPV +
Sbjct: 220 PDLKIIITSATIDVERFSKHFNNAPIIEVSGRTYPVETRY 259
Score = 42 (19.8 bits), Expect = 1.0e-21, Sum P(2) = 1.0e-21
Identities = 34/148 (22%), Positives = 62/148 (41%)
Query: 699 GECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQ-IKSLQLGSISEFL-----SRA-LQP 751
G H+ P + + D L+ + C+ IKSL G F+ +RA +Q
Sbjct: 868 GVSVHI-PVALLNQIDDTDFDWLVAGMREEKCVALIKSLPKGLRRNFVPAPDYARACVQA 926
Query: 752 PEPLSVK--NAI--EYLQIIGALDENENLTV--LGRNLSM-LPVEPKLGKMLILGAIFNC 804
+P S +A+ + L++ G E+ V + +L M +E GK++ G + +
Sbjct: 927 MQPFSASLLDAMCKQLLRMSGTRVNPEDFDVSQMPVHLQMNFKIEDDKGKLVAQGRVLDS 986
Query: 805 LDPVMTVVAGLSVRDPFLMPFDKKDLAE 832
L + V ++R +K+ L E
Sbjct: 987 LKAELQGVVAKAIRQVANKGIEKEALTE 1014
Score = 39 (18.8 bits), Expect = 2.1e-21, Sum P(2) = 2.1e-21
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 820 PFLMPFDKKDLAESAKAQFSARDYSD 845
P L+ F+K L + + SA D+ D
Sbjct: 820 PDLLDFNKSLLMQRSADHISALDFPD 845
>TIGR_CMR|SO_2229 [details] [associations]
symbol:SO_2229 "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 353 (129.3 bits), Expect = 1.6e-54, Sum P(2) = 1.6e-54
Identities = 101/333 (30%), Positives = 167/333 (50%)
Query: 541 REYSVQTQQSLSCWNPDSIGFNLIEHVLCHI--VKKERPGAVLVFMTGWDDINSLKDQLQ 598
R Y V+T+ + ++ + IE + + + E G +L+FM G +I +QL
Sbjct: 251 RTYPVETRYRPLVQDTEA-DLDQIEGIFAAVDELVAEGLGDILIFMNGEREIRDTAEQLN 309
Query: 599 AHPLLGDPSRVLLLACHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVID 658
D +L + ++ EQ +F G R+IVLATN+AETS+T+ + +VID
Sbjct: 310 RRNYR-DTE---ILPLYARLSYGEQSKVFSS-HTG-RRIVLATNVAETSLTVPGIRYVID 363
Query: 659 CGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQL 718
G A+ + Y L IS+ V PG C LY ++ +
Sbjct: 364 PGTARISRYSYRTKVQRLPIEPISQASANQRQGRCGRVGPGICIRLYDEADFNNRPAFTD 423
Query: 719 PELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPEPLSVKNA---IEYLQIIGALDENEN 775
PE+LRT L S+ LQ+ ++ LG I+ F ++PP+P +++ +E LQ + N
Sbjct: 424 PEILRTNLASVILQMLAIGLGDIAAF--PFIEPPDPRHIRDGFLLLEELQAVKQQKGNIV 481
Query: 776 LTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAK 835
LT LGR LS +PV+P+L +M+I CL+ V+ + +GLS++DP P DKK ++ A
Sbjct: 482 LTPLGRQLSQIPVDPRLARMVIESHQLGCLNEVLVIASGLSIQDPRERPMDKKQASDEAH 541
Query: 836 AQFSARDYSDHLALVRAYDGWKDAERHQSGYEY 868
+F A SD ++ V + K+ ++ S ++
Sbjct: 542 RRF-ADPQSDFVSWVNLWQHLKEQQKELSASQF 573
Score = 304 (112.1 bits), Expect = 1.6e-54, Sum P(2) = 1.6e-54
Identities = 79/220 (35%), Positives = 112/220 (50%)
Query: 269 QRSLQMHEKQQAWQESPE----GQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGC 324
Q ++ E+ QA E E + + + +LP R+ + KAIS NQVV+++GETG
Sbjct: 44 QELAKLAEQAQAAFEKVEQRLKARPRINYPDNLPVSGMREDIAKAISANQVVIIAGETGS 103
Query: 325 GKTTQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRL 384
GKTTQLP+ LE +RG I TQPRR++A +V+ RVA E LGE VG+KVR
Sbjct: 104 GKTTQLPKICLELGL-GSRGF---IGHTQPRRLAARSVASRVAEELQSPLGEVVGFKVRF 159
Query: 385 EGMKGRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXX 444
++ + T GI +I+DE HER +N DF+L
Sbjct: 160 ADALKSESYIKLMTDGILLAELTSDRYLDQYDTIIIDEAHERSLNIDFILGYLKQILKKR 219
Query: 445 XXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYF 484
SAT++ E FS +F AP++ + G TYPV +
Sbjct: 220 PDLKIIITSATIDVERFSKHFNNAPIIEVSGRTYPVETRY 259
Score = 42 (19.8 bits), Expect = 1.0e-21, Sum P(2) = 1.0e-21
Identities = 34/148 (22%), Positives = 62/148 (41%)
Query: 699 GECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQ-IKSLQLGSISEFL-----SRA-LQP 751
G H+ P + + D L+ + C+ IKSL G F+ +RA +Q
Sbjct: 868 GVSVHI-PVALLNQIDDTDFDWLVAGMREEKCVALIKSLPKGLRRNFVPAPDYARACVQA 926
Query: 752 PEPLSVK--NAI--EYLQIIGALDENENLTV--LGRNLSM-LPVEPKLGKMLILGAIFNC 804
+P S +A+ + L++ G E+ V + +L M +E GK++ G + +
Sbjct: 927 MQPFSASLLDAMCKQLLRMSGTRVNPEDFDVSQMPVHLQMNFKIEDDKGKLVAQGRVLDS 986
Query: 805 LDPVMTVVAGLSVRDPFLMPFDKKDLAE 832
L + V ++R +K+ L E
Sbjct: 987 LKAELQGVVAKAIRQVANKGIEKEALTE 1014
Score = 39 (18.8 bits), Expect = 2.1e-21, Sum P(2) = 2.1e-21
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 820 PFLMPFDKKDLAESAKAQFSARDYSD 845
P L+ F+K L + + SA D+ D
Sbjct: 820 PDLLDFNKSLLMQRSADHISALDFPD 845
>UNIPROTKB|F1S4S9 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR006575
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00642
Pfam:PF05773 PROSITE:PS50103 SMART:SM00356 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR026290 PANTHER:PTHR11224 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU694750
Ensembl:ENSSSCT00000009281 OMA:HRYPYQA Uniprot:F1S4S9
Length = 745
Score = 567 (204.7 bits), Expect = 3.1e-54, P = 3.1e-54
Identities = 115/252 (45%), Positives = 162/252 (64%)
Query: 282 QESPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEA 341
Q S + Q +L+ R+SLP+++ER+ +LK +S++QV+VVSG TGCGKTTQ+PQ+IL+
Sbjct: 455 QASRQFQSILQERQSLPAWEERENILKLLSKHQVLVVSGMTGCGKTTQIPQFILDDSLNG 514
Query: 342 ARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGI 401
+I+CTQPRRISA++V+ERVA ER E++G +VGY++RLE +K TRL++CTTG+
Sbjct: 515 PPEKVANIVCTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGV 574
Query: 402 XXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELF 461
GVTH+IVDE+HER DFLL+V MSATLNAELF
Sbjct: 575 LLRRLEGDTALQGVTHIIVDEVHERTEESDFLLLVLKDILLQRPTLQVILMSATLNAELF 634
Query: 462 SSYFGGAPMLHIPGFTYPVRAYFLENILEMTRYRLNTYNQIDDYGQEKSWKMQKQALALR 521
S YF P++ IPG T+PV YFLE+ + +TRY L + Y + +M K+ L R
Sbjct: 635 SEYFNSCPVITIPGRTFPVDQYFLEDAIAVTRYVLQDGSP---YARSTK-QMSKEKLRAR 690
Query: 522 KRKSSIASAVED 533
+ +++ ED
Sbjct: 691 RNRTAFEEVEED 702
>UNIPROTKB|O83538 [details] [associations]
symbol:TP_0526 "ATP-dependent helicase (HrpA)"
species:243276 "Treponema pallidum subsp. pallidum str. Nichols"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AE000520
GenomeReviews:AE000520_GR PIR:H71312 RefSeq:NP_218966.1
ProteinModelPortal:O83538 IntAct:O83538 GeneID:2610764
KEGG:tpa:TP0526 PATRIC:20531093 OMA:WEYRERF ProtClustDB:CLSK507866
Uniprot:O83538
Length = 668
Score = 368 (134.6 bits), Expect = 4.0e-54, Sum P(2) = 4.0e-54
Identities = 92/340 (27%), Positives = 172/340 (50%)
Query: 563 LIEHVLC---HIVKKERPGAVLVFMTGWDDINSLKDQLQAHPLLGDPSRVLLLACHGSMA 619
L+E ++C ++ GA+L+F+ G I + +L ++ LL +G ++
Sbjct: 208 LLEKIVCIVERVIASRDKGAILIFLPGERSIKNCITRLSHERWF---RKLFLLPLYGRLS 264
Query: 620 SSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPS 679
EQ +F++ G RK+V+ATN+AETSITI+DV VID G K SY+ L+ T L +
Sbjct: 265 KEEQEQVFNRAPFGKRKVVIATNIAETSITIDDVTTVIDSGLVKLNSYNPLSYTASLDET 324
Query: 680 WISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLG 739
IS+ V+ G CY LY R ++ Y L E+ RT L + +++ L +
Sbjct: 325 PISQASCNQRRGRAGRVRAGTCYRLYSRDDFEQREPYTLEEIYRTDLSEVVMRMAELGIH 384
Query: 740 SISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLI-- 797
F + PP + A + L+++GAL+++ +L+ +G+ + + P+ P+ +M++
Sbjct: 385 DFEHF--DFISPPGTHGIIGAEDTLRLLGALEDDRSLSEIGKMMCLFPLGPRQSRMIVEA 442
Query: 798 LGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWK 857
L + +D V+ A LS R P + D+++ + A FS D ++ +R Y +
Sbjct: 443 LRRYPHSIDDVLIAAAFLSARSPLIFSEDQEEKTKKAHGTFSD-PMGDFVSFLRIYRAY- 500
Query: 858 DAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAG 897
A+ + + +C +L + + I ++++Q ++ G
Sbjct: 501 -AQENNK-HSFCQHFYLDERIMAEISNIKEQLELIVSGMG 538
Score = 272 (100.8 bits), Expect = 4.0e-54, Sum P(2) = 4.0e-54
Identities = 67/190 (35%), Positives = 95/190 (50%)
Query: 295 RSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQP 354
+ LP Y ++D +L A++ + V+VV TG GKTTQLP IL E G A + TQP
Sbjct: 5 KQLPVYSQKDKILSALAHHHVIVVESPTGSGKTTQLP-LILH-EAGYNEGGAIGV--TQP 60
Query: 355 RRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXG 414
RRI+ ++VSE +A + VGYK+R E +T++ T GI
Sbjct: 61 RRIAVLSVSEFIAKQVLHVQPGIVGYKMRFEDHTDVETKIKVMTDGILLQEMKLDPLLSK 120
Query: 415 VTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIP 474
+ ++VDE HER +N DF+L + SAT+N +FS YF P++ I
Sbjct: 121 YSIIMVDEAHERSLNIDFILGLLKRVLQQRHDFRIVISSATINTAMFSRYFNECPVIKID 180
Query: 475 GFTYPVRAYF 484
YPV F
Sbjct: 181 AVAYPVTVIF 190
>UNIPROTKB|Q9KS77 [details] [associations]
symbol:VC1382 "ATP-dependent helicase HrpA" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004386
"helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 335 (123.0 bits), Expect = 4.0e-54, Sum P(2) = 4.0e-54
Identities = 91/281 (32%), Positives = 146/281 (51%)
Query: 578 GAVLVFMTGWDDINSLKDQLQAHPLLGDPSRVLLLACHGSMASSEQRLIFDKPEDGVRKI 637
G +L+FM G +I D L L D V L A +++ EQ IF +P G R+I
Sbjct: 302 GDILIFMNGEREIRDTADALSKRNLR-DTEIVPLYA---RLSAGEQNKIF-QPHAG-RRI 355
Query: 638 VLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXXXVQ 697
VLATN+AETS+T+ + +VID G A+ + Y L IS+ +
Sbjct: 356 VLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRTE 415
Query: 698 PGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPEPLSV 757
G C LY + + ++ PE+LRT L S+ LQ+ +L LG I F ++ P+ ++
Sbjct: 416 EGICIRLYSEEDFLSRPEFTDPEILRTNLASVILQMTALGLGDIEAF--PFVEAPDKRNI 473
Query: 758 KNAIEYLQIIGAL-----DENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVV 812
++ + L+ +GA+ D + LT G+ L+ LP++P+L +M++ + CL VM +
Sbjct: 474 QDGVRLLEELGAINDQIKDPKKRLTESGKQLARLPIDPRLARMVLEASKLGCLKEVMIIA 533
Query: 813 AGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAY 853
+ LS++DP P DK+ A+ +F+ D SD L LV +
Sbjct: 534 SALSIQDPRERPSDKQQSADDKHRRFNHED-SDFLTLVNLW 573
Score = 319 (117.4 bits), Expect = 4.0e-54, Sum P(2) = 4.0e-54
Identities = 75/228 (32%), Positives = 115/228 (50%)
Query: 257 VQNSVVRERILRQRSLQMHEKQQAWQESPEGQKMLEFRRSLPSYKERDALLKAISENQVV 316
++N R + + +L + + ++ + +E+ LP ++RD + +AI+ +QVV
Sbjct: 47 IKNESARNAVFDEIALDIAQSMMVVEQRKQQMPKIEYPALLPVSQKRDDIAQAIAHHQVV 106
Query: 317 VVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGE 376
+V+GETG GKTTQLP+ E RG I TQPRR++A +V+ R+A E +LG
Sbjct: 107 IVAGETGSGKTTQLPKIC----AELGRGKYGLIGHTQPRRLAARSVANRIAEEMETELGG 162
Query: 377 SVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIV 436
VGYKVR T++ T GI +I+DE HER +N DF+L
Sbjct: 163 FVGYKVRFTDQISDQTQIKLMTDGILLAEIQNDRFLNQYDTIIIDEAHERSLNIDFILGY 222
Query: 437 XXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYF 484
SAT++ E FS +F AP++ + G TYPV +
Sbjct: 223 LKQLLPRRPDLKVIITSATIDPERFSKHFSNAPIIEVSGRTYPVEVRY 270
Score = 37 (18.1 bits), Expect = 8.5e-23, Sum P(2) = 8.5e-23
Identities = 10/47 (21%), Positives = 24/47 (51%)
Query: 776 LTVLGRNLSMLPVEPKLGK--MLILGAIFNCLDPVMTVVA-GLSVRD 819
+ + R + LPV+P + ML + ++ N ++ + G+++ D
Sbjct: 1224 MRAIERRMEKLPVDPNKDRLHMLKIESVANKYKELLNKIPKGMAIPD 1270
>TIGR_CMR|VC_1382 [details] [associations]
symbol:VC_1382 "ATP-dependent helicase HrpA" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004386 "helicase activity"
evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GenomeReviews:AE003852_GR GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 335 (123.0 bits), Expect = 4.0e-54, Sum P(2) = 4.0e-54
Identities = 91/281 (32%), Positives = 146/281 (51%)
Query: 578 GAVLVFMTGWDDINSLKDQLQAHPLLGDPSRVLLLACHGSMASSEQRLIFDKPEDGVRKI 637
G +L+FM G +I D L L D V L A +++ EQ IF +P G R+I
Sbjct: 302 GDILIFMNGEREIRDTADALSKRNLR-DTEIVPLYA---RLSAGEQNKIF-QPHAG-RRI 355
Query: 638 VLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXXXVQ 697
VLATN+AETS+T+ + +VID G A+ + Y L IS+ +
Sbjct: 356 VLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRTE 415
Query: 698 PGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPEPLSV 757
G C LY + + ++ PE+LRT L S+ LQ+ +L LG I F ++ P+ ++
Sbjct: 416 EGICIRLYSEEDFLSRPEFTDPEILRTNLASVILQMTALGLGDIEAF--PFVEAPDKRNI 473
Query: 758 KNAIEYLQIIGAL-----DENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVV 812
++ + L+ +GA+ D + LT G+ L+ LP++P+L +M++ + CL VM +
Sbjct: 474 QDGVRLLEELGAINDQIKDPKKRLTESGKQLARLPIDPRLARMVLEASKLGCLKEVMIIA 533
Query: 813 AGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAY 853
+ LS++DP P DK+ A+ +F+ D SD L LV +
Sbjct: 534 SALSIQDPRERPSDKQQSADDKHRRFNHED-SDFLTLVNLW 573
Score = 319 (117.4 bits), Expect = 4.0e-54, Sum P(2) = 4.0e-54
Identities = 75/228 (32%), Positives = 115/228 (50%)
Query: 257 VQNSVVRERILRQRSLQMHEKQQAWQESPEGQKMLEFRRSLPSYKERDALLKAISENQVV 316
++N R + + +L + + ++ + +E+ LP ++RD + +AI+ +QVV
Sbjct: 47 IKNESARNAVFDEIALDIAQSMMVVEQRKQQMPKIEYPALLPVSQKRDDIAQAIAHHQVV 106
Query: 317 VVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGE 376
+V+GETG GKTTQLP+ E RG I TQPRR++A +V+ R+A E +LG
Sbjct: 107 IVAGETGSGKTTQLPKIC----AELGRGKYGLIGHTQPRRLAARSVANRIAEEMETELGG 162
Query: 377 SVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIV 436
VGYKVR T++ T GI +I+DE HER +N DF+L
Sbjct: 163 FVGYKVRFTDQISDQTQIKLMTDGILLAEIQNDRFLNQYDTIIIDEAHERSLNIDFILGY 222
Query: 437 XXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYF 484
SAT++ E FS +F AP++ + G TYPV +
Sbjct: 223 LKQLLPRRPDLKVIITSATIDPERFSKHFSNAPIIEVSGRTYPVEVRY 270
Score = 37 (18.1 bits), Expect = 8.5e-23, Sum P(2) = 8.5e-23
Identities = 10/47 (21%), Positives = 24/47 (51%)
Query: 776 LTVLGRNLSMLPVEPKLGK--MLILGAIFNCLDPVMTVVA-GLSVRD 819
+ + R + LPV+P + ML + ++ N ++ + G+++ D
Sbjct: 1224 MRAIERRMEKLPVDPNKDRLHMLKIESVANKYKELLNKIPKGMAIPD 1270
>DICTYBASE|DDB_G0269306 [details] [associations]
symbol:dhx35 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0269306 GO:GO:0005524
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13117 OMA:NIFVVPP
RefSeq:XP_645858.1 ProteinModelPortal:Q55EC3
EnsemblProtists:DDB0233419 GeneID:8616802 KEGG:ddi:DDB_G0269306
InParanoid:Q55EC3 Uniprot:Q55EC3
Length = 716
Score = 376 (137.4 bits), Expect = 4.2e-54, Sum P(3) = 4.2e-54
Identities = 121/436 (27%), Positives = 209/436 (47%)
Query: 577 PGAVLVFMTGWDDINSLKDQL------------QAHPLLGDP-SRVLLLACHGSMASSEQ 623
PG +LVF+TG ++I L L Q H P + LL + ++ ++Q
Sbjct: 286 PGDILVFLTGQEEIEKLIQTLDDKFEILRQYHQQHHHQQQQPFMKYSLLPMYSGLSINKQ 345
Query: 624 RLIFDKPEDG--VRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWI 681
+F+ D +RKI+++TN+AETSITI+ VV+V+DCG K SYD+ + L+
Sbjct: 346 IKVFESVGDSKKIRKIIISTNIAETSITIDGVVYVVDCGFVKIKSYDSESGLESLVIVPT 405
Query: 682 SKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFA-DYQLPELLRTPLQSLCLQIKSLQLGS 740
SK + G+CY LY Y+ D +PE+ R+ L + LQ+K+L + +
Sbjct: 406 SKSSANQRAGRAGRSRAGKCYRLYTELTYEKLLPDQTIPEIQRSNLTNTILQLKALGIDN 465
Query: 741 ISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLT-VLGRNLSMLPVEPKLGKMLILG 799
I F QPP S+ +E L +GALD+N LT G ++ P +P KM+I
Sbjct: 466 ILNF-DFISQPPSS-SLIRGLEVLYGLGALDDNGKLTNPTGMIMAEFPTDPTFSKMIIQS 523
Query: 800 AI--FNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWK 857
+ FNC D +T+ A L+++ F K ++ ++ DHL L+ ++ +
Sbjct: 524 SSNGFNCSDECITITAMLNIQGLFTNQNHK------SRKHLLVKE-GDHLTLLNIFNSFI 576
Query: 858 DAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGL-VDRNTENCNKWSHDEHLI 916
+QS ++C ++ ++ + ++ + +RKQ L K + V ++ N +LI
Sbjct: 577 S---NQSSPQWCNQHQINYKAMQRVLQVRKQLLAYAKKYSINVISCFDSNNNREQCSNLI 633
Query: 917 RAVICAGLFPGLCSVVNKEKSIALKTMEDGQVL-LYSNSVNAGVPKIPYPWLVFNEKIKV 975
R I +G F + + + +T+ + L L+ SV + P W++FNE
Sbjct: 634 RKAIVSGFFTNAAQL---QPDGSYQTIREKHKLWLHPTSVLC-LSNSPQ-WVIFNEVTIT 688
Query: 976 NSVFLRDSTGVSDSVL 991
+++D T + + L
Sbjct: 689 TKEYMKDVTSIEPNWL 704
Score = 256 (95.2 bits), Expect = 4.2e-54, Sum P(3) = 4.2e-54
Identities = 55/144 (38%), Positives = 89/144 (61%)
Query: 294 RRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESE-TEAARGAACSIICT 352
R SLP Y+ R +L + + +V+ G TGCGK+TQ+PQY+ ES ++ R +I+CT
Sbjct: 52 RISLPIYQNRKHILYLLEKYSTLVIIGNTGCGKSTQIPQYLFESGWSDGFR----TILCT 107
Query: 353 QPRRISAMAVSERVAAERGEK-LGESVGYKVRL-EGMKGRDTRLMFCTTGIXXXXXXXXX 410
QPRR++A++++ERVA E GE+ +G++VGY VR E + +TR+ + T G+
Sbjct: 108 QPRRVAAISLAERVAQEMGEQHVGKTVGYSVRFDEKISDIETRIKYVTDGMLIREMMLDP 167
Query: 411 XXXGVTHVIVDEIHERGMNEDFLL 434
+ +++DE HER + D L+
Sbjct: 168 LLLKYSVIMIDEAHERSLQTDLLM 191
Score = 67 (28.6 bits), Expect = 2.8e-33, Sum P(2) = 2.8e-33
Identities = 23/93 (24%), Positives = 42/93 (45%)
Query: 193 NYRSDLDEKRPQREVILPFGLLREVDAHLKAYLSQKYINASMSSLSNVGSTT--NDEGLY 250
NY D+ + ++ G VD H + YI ++ ++ ++ +T D ++
Sbjct: 233 NYNQTNDKSKDTSTILSIEGRTYPVDIHYLEESTSNYIQTTIQTIIDIHTTQPPGDILVF 292
Query: 251 ----EQQEQLVQNSVVRERILRQRSLQMHEKQQ 279
E+ E+L+Q + ILRQ Q H +QQ
Sbjct: 293 LTGQEEIEKLIQTLDDKFEILRQYHQQHHHQQQ 325
Score = 53 (23.7 bits), Expect = 4.2e-54, Sum P(3) = 4.2e-54
Identities = 21/62 (33%), Positives = 28/62 (45%)
Query: 453 SATLNAELFSSYFG----------GAPMLHIPGFTYPVRAYFLENILEMTRYRLNTYNQI 502
SATLNA F ++F + +L I G TYPV ++LE + Y T I
Sbjct: 220 SATLNANDFFNFFNYNQTNDKSKDTSTILSIEGRTYPVDIHYLEE--STSNYIQTTIQTI 277
Query: 503 DD 504
D
Sbjct: 278 ID 279
>UNIPROTKB|G4NGS5 [details] [associations]
symbol:MGG_04040 "DEAH box polypeptide 37" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001236 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14780
RefSeq:XP_003719802.1 ProteinModelPortal:G4NGS5
EnsemblFungi:MGG_04040T0 GeneID:2677154 KEGG:mgr:MGG_04040
Uniprot:G4NGS5
Length = 1185
Score = 364 (133.2 bits), Expect = 5.2e-54, Sum P(5) = 5.2e-54
Identities = 80/218 (36%), Positives = 121/218 (55%)
Query: 606 PSRVLLLACHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKET 665
PSR+ +L + + + EQ +F+ P DG R +VLATN+AETS+TI + +V D G++KE
Sbjct: 672 PSRMHVLPLYSLLPTKEQLRVFEPPPDGSRLVVLATNVAETSLTIPGIRYVFDSGRSKER 731
Query: 666 SYDALNNTPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFAD-YQLPELLRT 724
YD L WISK PG C+ LY VY+ D + LPELLRT
Sbjct: 732 KYDQLTGVQSFEVGWISKASANQREGRAGRTGPGHCWRLYSSAVYERDLDEFALPELLRT 791
Query: 725 PLQSLCLQIKSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLS 784
L+ + LQ+KS+ L + F PPE S+ + + L+ I A+ E +T +G +S
Sbjct: 792 SLEGVVLQLKSMNLQHVVNFPFPT--PPERDSLVKSEKLLKYISAVSEEGRVTQVGYTMS 849
Query: 785 MLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFL 822
+ P+ P+ ++L+LG +CL +T+VA LS + F+
Sbjct: 850 IFPLSPRFSRILLLGHQHDCLHYTVTLVAALSAAEIFI 887
Score = 268 (99.4 bits), Expect = 5.2e-54, Sum P(5) = 5.2e-54
Identities = 72/216 (33%), Positives = 107/216 (49%)
Query: 284 SPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAAR 343
SPE Q R +LP E +++AI N +VVV G TG GKTTQ+PQ++ E+ +
Sbjct: 347 SPEIQSA---RLALPVVSEEQRIMEAIHNNNIVVVCGATGSGKTTQIPQFLFEAGYGSPD 403
Query: 344 GAACSII-CTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIX 402
+I TQPRR++A+++S+RVA E G+ + VGY++R EG +DT + F T G+
Sbjct: 404 SPTPGMIGITQPRRVAAVSMSKRVAEELGDH-SQKVGYQIRFEGTVNKDTAVKFMTDGVL 462
Query: 403 XXXXXXXXXXXGVTHVIVDEIHERGMNEDFLL-----IVXXXXXXXXXXXXXX-----XM 452
+ ++VDE HER +N D L+ I+ M
Sbjct: 463 LREVAQDLALRKYSAIVVDEAHERSVNTDILIGMLSRIIKLRAEMAQEDPTVKPLKLVIM 522
Query: 453 SATLNAELFSS----YFGGAPMLHIPGFTYPVRAYF 484
SATL E + + P+L + G YPV +F
Sbjct: 523 SATLRIEDLTENKNLFATPPPVLEVEGRQYPVTLHF 558
Score = 60 (26.2 bits), Expect = 5.2e-54, Sum P(5) = 5.2e-54
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 573 KKERPGAVLVFMTGWDDINSLKDQLQ 598
KK PG +LVF+TG ++I L +L+
Sbjct: 579 KKLPPGGMLVFLTGQNEITQLSKRLK 604
Score = 53 (23.7 bits), Expect = 5.2e-54, Sum P(5) = 5.2e-54
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 862 HQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLK 894
H+ ++C +F+ + LK LR+Q + LLK
Sbjct: 951 HEPTEKWCESHFVRFKVLKEAQKLRQQIVQLLK 983
Score = 42 (19.8 bits), Expect = 5.2e-54, Sum P(5) = 5.2e-54
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 225 LSQKYINASMSSLSNVGSTTNDEGLYEQQEQ 255
LSQ +N + L G+ T +E LYE++E+
Sbjct: 116 LSQA-LNEERAGLP--GNATREELLYEKREE 143
Score = 39 (18.8 bits), Expect = 8.6e-19, Sum P(4) = 8.6e-19
Identities = 13/52 (25%), Positives = 26/52 (50%)
Query: 841 RDYSDHLALVRAYD-GW--------KDAERHQSGYEYCWKNFLSAQTLKAID 883
R Y D L V++++ GW ++ ++G +CW+ + SA + +D
Sbjct: 731 RKY-DQLTGVQSFEVGWISKASANQREGRAGRTGPGHCWRLYSSAVYERDLD 781
Score = 37 (18.1 bits), Expect = 1.7e-53, Sum P(5) = 1.7e-53
Identities = 5/32 (15%), Positives = 16/32 (50%)
Query: 92 PLLEQQTSNYGRYAYQDESSDDSDREFGSTQQ 123
P+ + +G ++ ++ D + E G+ ++
Sbjct: 221 PVESSDSDEWGGFSSAEDEQDGDNEELGTEEK 252
>UNIPROTKB|F5GXM6 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K13117 EMBL:AL023803
UniGene:Hs.444520 DNASU:60625 GeneID:60625 KEGG:hsa:60625 CTD:60625
HGNC:HGNC:15861 GenomeRNAi:60625 NextBio:65461 IPI:IPI00513682
RefSeq:NP_001177738.1 ProteinModelPortal:F5GXM6 SMR:F5GXM6
Ensembl:ENST00000373323 UCSC:uc010zwc.2 ArrayExpress:F5GXM6
Bgee:F5GXM6 Uniprot:F5GXM6
Length = 672
Score = 460 (167.0 bits), Expect = 2.7e-53, Sum P(2) = 2.7e-53
Identities = 121/442 (27%), Positives = 224/442 (50%)
Query: 556 PDSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQL--QAHPLL--GDPSRVLL 611
PD I + +E V+ I + E G VL F+TG +++ ++ L QA L G + +
Sbjct: 224 PDYIK-STVETVV-KIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGMKRHLRV 281
Query: 612 LACHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALN 671
L + + S EQ +F++ VRK+++ATN+AETSITI+ +V+VIDCG K +Y+
Sbjct: 282 LPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRT 341
Query: 672 NTPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCL 731
CL+ +S+ + G+CY LY +D +PE+ R+ L + L
Sbjct: 342 AIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDKLPQSTVPEMQRSNLAPVIL 401
Query: 732 QIKSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTV-LGRNLSMLPVEP 790
Q+K+L + ++ F + PP S+ A+E L +G LD++ LT LG ++ P+ P
Sbjct: 402 QLKALGIDNVLRF--HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNP 459
Query: 791 KLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALV 850
KML+ F C ++++ A + +++ F++P ++K A +F+ + DHL ++
Sbjct: 460 MFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPPNQKSHAIRVHRKFAVEE-GDHLTML 518
Query: 851 RAYDGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWS 910
Y+ + +H ++C ++FL+ + L ++R+Q LL + +++E
Sbjct: 519 NIYEAFI---KHNKDSKWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPRKSSEG----- 570
Query: 911 HDEHLIRAVICAGLFPGLCSVVNKEKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFN 970
D L+ I +G F + + A +T+ D L + + + + P W+++N
Sbjct: 571 -DPDLVLRCIVSGFF---ANAARFHSTGAYRTIRDDHEL-HIHPASVLYAEKPPRWVIYN 625
Query: 971 EKIKVNSVFLRDSTGVSDSVLL 992
E I+ + ++RD T + + LL
Sbjct: 626 EVIQTSKYYMRDVTAIESAWLL 647
Score = 159 (61.0 bits), Expect = 2.7e-53, Sum P(2) = 2.7e-53
Identities = 50/172 (29%), Positives = 81/172 (47%)
Query: 329 QLP--QYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEG 386
+LP +Y+ E+ A G + TQPRR++A+ V+ RVA ERG LG VGY +R +
Sbjct: 53 KLPVFKYLAEAGW-TAEGRVVGV--TQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDD 109
Query: 387 MKGR-DTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXX 445
+ TR+ F T G+ + +++DE HER + D + +
Sbjct: 110 CTDQLATRIKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRG 169
Query: 446 XXXXXXMSATLNAELFSSYFG----GAP------MLHIPGFTYPVRAYFLEN 487
SATL+A+ F +F P +L + G T+PV ++L++
Sbjct: 170 DLRLIVASATLDADKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQS 221
>UNIPROTKB|P43329 [details] [associations]
symbol:hrpA species:83333 "Escherichia coli K-12"
[GO:0004386 "helicase activity" evidence=IEA;IMP] [GO:0009451 "RNA
modification" evidence=IMP] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0006397 "mRNA processing"
evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:D42105
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0009451 PIR:H64892 RefSeq:NP_415931.4 RefSeq:YP_489680.1
ProteinModelPortal:P43329 SMR:P43329 DIP:DIP-9937N IntAct:P43329
MINT:MINT-1229564 PRIDE:P43329 EnsemblBacteria:EBESCT00000000014
EnsemblBacteria:EBESCT00000015011 GeneID:12932513 GeneID:948444
KEGG:ecj:Y75_p1389 KEGG:eco:b1413 PATRIC:32118112 EchoBASE:EB2772
EcoGene:EG12936 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 BioCyc:EcoCyc:G6732-MONOMER
BioCyc:ECOL316407:JW5905-MONOMER Genevestigator:P43329
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967 Uniprot:P43329
Length = 1300
Score = 343 (125.8 bits), Expect = 8.6e-53, Sum P(2) = 8.6e-53
Identities = 95/335 (28%), Positives = 169/335 (50%)
Query: 572 VKKERPGAVLVFMTGWDDINSLKDQLQAHPLLGDPSRVLLLACHGSMASSEQRLIFDKPE 631
+ +E G +L+FM+G +I D L L +L + +++SEQ +F
Sbjct: 285 LSQESHGDILIFMSGEREIRDTADALNKLNL----RHTEILPLYARLSNSEQNRVFQS-H 339
Query: 632 DGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXX 691
G R+IVLATN+AETS+T+ + +VID G A+ + Y L IS+
Sbjct: 340 SG-RRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKG 398
Query: 692 XXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQP 751
V G C LY + + ++ PE+LRT L S+ LQ+ +L LG I+ F ++
Sbjct: 399 RCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAF--PFVEA 456
Query: 752 PEPLSVKNAIEYLQIIGALDENEN-----LTVLGRNLSMLPVEPKLGKMLILGAIFNCLD 806
P+ ++++ + L+ +GA+ +E LT LGR LS LPV+P+L +M++ C+
Sbjct: 457 PDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVR 516
Query: 807 PVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGY 866
M + + LS++DP P DK+ ++ +F ++ SD LA V ++ + ++ S
Sbjct: 517 EAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKE-SDFLAFVNLWNYLGEQQKALSSN 575
Query: 867 EY---CWKNFLSAQTLKAIDSLRKQFLFLLKDAGL 898
+ C ++L+ ++ + Q ++K+ G+
Sbjct: 576 AFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGI 610
Score = 298 (110.0 bits), Expect = 8.6e-53, Sum P(2) = 8.6e-53
Identities = 75/217 (34%), Positives = 112/217 (51%)
Query: 296 SLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPR 355
+LP +++ +L+AI ++QVV+V+GETG GKTTQLP+ +E RG I TQPR
Sbjct: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICME----LGRGIKGLIGHTQPR 131
Query: 356 RISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXGV 415
R++A V+ R+A E + G +GYKVR +T + T GI
Sbjct: 132 RLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQY 191
Query: 416 THVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPG 475
+I+DE HER +N DFLL SAT++ E FS +F AP++ + G
Sbjct: 192 DTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSG 251
Query: 476 FTYPVRAYF---LENILEMTRYRLNT-YNQIDDYGQE 508
TYPV + +E + R +L ++ +D+ QE
Sbjct: 252 RTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQE 288
>CGD|CAL0004556 [details] [associations]
symbol:orf19.2090 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0032040 "small-subunit
processome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 CGD:CAL0004556 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AACQ01000031
EMBL:AACQ01000030 KO:K14780 RefSeq:XP_719536.1 RefSeq:XP_719660.1
STRING:Q5ACX7 GeneID:3638741 GeneID:3638820 KEGG:cal:CaO19.2090
KEGG:cal:CaO19.9637 Uniprot:Q5ACX7
Length = 1263
Score = 564 (203.6 bits), Expect = 1.9e-52, Sum P(3) = 1.9e-52
Identities = 180/644 (27%), Positives = 312/644 (48%)
Query: 294 RRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESET-EAARGAACSII-C 351
R LP + E +++A+ + +++ GETG GKTTQ+PQ++ E+ +I
Sbjct: 440 RALLPVFAEEHRIMEAVYHHDCIILCGETGSGKTTQVPQFLYEAGFGNLLHDLYPGMIGV 499
Query: 352 TQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGM---KGRD--TRLMFCTTGIXXXXX 406
TQPRR++A++++ERV +E G+ G VGY++R + +G++ T L F T G+
Sbjct: 500 TQPRRVAAVSMAERVGSELGDH-GHRVGYQIRFDTTIKNEGKENGTALKFMTDGVLLREM 558
Query: 407 XXXXXXXGVTHVIVDEIHERGMNEDFLL-----IVXXXXXXXXXX------XXXXXMSAT 455
+ +I+DE HER +N D L+ +V MSAT
Sbjct: 559 MTDFLLAKYSAIIIDEAHERNINTDILIGMLTRVVKLRRKYHKENPQLYKPLKLIIMSAT 618
Query: 456 LNAELFSS----YFGGAPMLHIPGFTYPVRAYFLENILEMTRYRLNTYNQIDDYGQEKSW 511
L FS + P++++ YPV +F N + Y+ +++ +K+
Sbjct: 619 LRVSDFSENPALFKTPPPIINVQARQYPVSIHF--N-------KKTNYDYLEE-AFKKTC 668
Query: 512 KMQKQA-----LALRKRKSSIASAVEDALEAADFREYS-VQTQQSLSCWNPDSIGFNLIE 565
K+ ++ L ++ I + V+ + F++ S +Q +++ +++ +E
Sbjct: 669 KIHRKLPEGGILIFLTGQNEITTLVKKLRQEFPFKKKSTIQYDENIDVKLSENVQQE-VE 727
Query: 566 HVLCHIVKKERPGAVLVFMTGWD---DINSLKDQLQAHPLLGDPSRVLLLACHGSMASSE 622
V V+ G + + G + + ++ + + P VL L + + + +
Sbjct: 728 DV-DFSVQSGDAGILDDYEEGEENEEEEEGFEESIDSKESEVGPLYVLPL--YSLLPTKQ 784
Query: 623 QRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWIS 682
Q +F+ P G R ++ATN+AETS+TI + +V+DCG++KE Y+ N W+S
Sbjct: 785 QMKVFEDPPPGSRICIVATNVAETSLTIPGIRYVVDCGRSKERKYNQENGVQSFEVDWVS 844
Query: 683 KXXXXXXXXXXXXVQPGECYHLYPRYVY-DAFADYQLPELLRTPLQSLCLQIKSLQLGSI 741
K PG CY LY V+ D F + +PE+LR P +S+ L +KS+ + I
Sbjct: 845 KASANQRAGRAGRTGPGHCYRLYSSAVFEDFFPQFSVPEILRMPFESIVLSMKSMGIDQI 904
Query: 742 SEFLSRALQPPEPLSVKNAIEYLQIIGALD-ENENLTVLGRNLSMLPVEPKLGKMLILGA 800
+ F PP+ S+K A E L I+GALD E + +T LG+ +S+ P+ P+ K+LI+G
Sbjct: 905 ANFPFPT--PPDRFSLKKAEELLVILGALDKEQKQITDLGKKMSLFPLSPRFAKILIIGN 962
Query: 801 IFNCLDPVMTVVAGLSVRDPFL----MPFDKKDLAES--------AKAQFSARDYSDH-- 846
CL ++ +V+ LSV DPF+ + + D A ++A FS D S +
Sbjct: 963 QQECLSYIIAIVSALSVGDPFIGENELVGNMNDEARREFRTKFYHSRALFSKLDASSNCM 1022
Query: 847 --LALVRAYDGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQ 888
L+ V AYD E Q+G+ K++L + ++ I LRKQ
Sbjct: 1023 MLLSAVCAYDHVPKEE--QNGF--LQKHYLRHKMMEEIQKLRKQ 1062
Score = 60 (26.2 bits), Expect = 1.9e-52, Sum P(3) = 1.9e-52
Identities = 32/141 (22%), Positives = 57/141 (40%)
Query: 212 GLLREVDAHLKAYLSQKYINASMSSLSNVGSTTNDEGLYEQQEQLVQNSVVRERILRQRS 271
G+L + A KA Q Y TT + +++ ER+ R+R+
Sbjct: 15 GMLAKQAALKKARNKQFYRQDDEEETETTPDTTEIFNTQDSNSEILAPVTEEERLARKRA 74
Query: 272 LQMHEKQQAWQESPEGQKMLEFRRS-LPSY-------KERDALLKAISENQV----VVVS 319
L+ Q + E+ + +KM ++ L Y +E+ LL+ ++E ++
Sbjct: 75 LE----QNLYSENSKKEKMSRAKKKRLDKYIDHQLKREEKKILLEKLAETKMDTSNFAAL 130
Query: 320 GETGCGKTTQLPQYILESETE 340
E G GK T+ + I E E
Sbjct: 131 KELGKGKQTKKEEMIEALELE 151
Score = 45 (20.9 bits), Expect = 1.9e-52, Sum P(3) = 1.9e-52
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 943 MEDGQ-VLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDST 984
+EDG V L+ NS+ A +IP +LV+ + + D T
Sbjct: 1138 IEDGPFVYLHPNSLIAESGQIPSSYLVY-QSLSTKGNISEDET 1179
Score = 39 (18.8 bits), Expect = 2.9e-50, Sum P(3) = 2.9e-50
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 143 LLRNKDEQEVVSRAKKDRRD 162
L ++E +SRAKK R D
Sbjct: 79 LYSENSKKEKMSRAKKKRLD 98
Score = 37 (18.1 bits), Expect = 4.7e-50, Sum P(3) = 4.7e-50
Identities = 17/61 (27%), Positives = 26/61 (42%)
Query: 65 SRRRHAVVTCS---GAVTRTRRLDW--KAVSYP-LLEQQTSNYGRYAYQDESSDDSDREF 118
S+ RH+ S A + R ++ K V P + E+ Y + +DE D S E
Sbjct: 353 SKPRHSTTAASFKEWAEQQVRIMEGRDKNVLTPEVSEEIKKKYSKQTVRDEDVDHSSDEE 412
Query: 119 G 119
G
Sbjct: 413 G 413
>UNIPROTKB|F1NWM3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AADN02025787
IPI:IPI00583149 Ensembl:ENSGALT00000008234 Uniprot:F1NWM3
Length = 730
Score = 323 (118.8 bits), Expect = 2.2e-52, Sum P(2) = 2.2e-52
Identities = 112/424 (26%), Positives = 197/424 (46%)
Query: 575 ERPGAVLVFMTGWDDINSLKDQL--QAHPL-----LGDPS--RVLLLACHGSMASSEQRL 625
E G +LVF+TG +I D L +A + + D S +L+L +GSM++ +Q+
Sbjct: 219 EPEGDILVFLTGQIEIEKACDLLFKKAESIDYRYEVHDRSIEGLLILPLYGSMSTDQQKR 278
Query: 626 IFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXX 685
IF G+RK V++TN+A TS+TI V +V+D G K+ +++ L ISK
Sbjct: 279 IFLPAPKGIRKCVVSTNIAATSLTIEGVRYVVDSGFVKQLNHNPRVGLDILEVVPISKSE 338
Query: 686 XXXXXXXXXXVQPGECYHLYPRYVYD-AFADYQLPELLRTPLQSLCLQIKSLQLGSISEF 744
G+ Y LY ++ D+ +PE+ RT L S+ L +K L + + F
Sbjct: 339 AMQRAGRAGRTSSGKSYRLYSTEFWEQCMPDHTVPEIKRTSLTSVILTLKCLSVHDVIRF 398
Query: 745 LSRALQPPEPLSVKNAIEYLQIIGALDENE--NLTVLGRNLSMLPVEPKLGKMLILGAIF 802
L PE + A++ L A+D ++T LG L P+ P L +I A
Sbjct: 399 --PYLDRPEERHILEALKQLYQCDAIDRTRRGHVTRLGEFLVQFPLPPNLSCAVIKAASL 456
Query: 803 NCLDPVMTVVAGLSVRDPFLMPFD--KKDLAESAKAQFSAR--DYSDHLALVRAYDGWKD 858
+C D ++ + A LSV + F+ P D K+ AE + S++ +D L+ ++ K
Sbjct: 457 DCEDMLLPIAAMLSVENVFIRPGDPQKQKEAELQHQELSSQVGGCNDFATLLNIFEQCK- 515
Query: 859 AERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDEHLIRA 918
A + S + C K ++ + +K+ S+ KQ + + + + S E L+R
Sbjct: 516 ASKSPSAW--CHKYWIHWRAVKSALSVEKQLREITSKLKQLPDFPKETFEGSRTE-LLRR 572
Query: 919 VICAGLFPGLCSVVNKEKSIALKTMED-GQVLLYSNSVNAGVPKIPYPWLVFNEKIKVNS 977
+CAG F +V + + TM+ G ++ S + W++F++ +
Sbjct: 573 CLCAGYF---INVARRSAARTFCTMDGHGSIVYIHPSSTLYNQETRLEWIIFHDVTVTSK 629
Query: 978 VFLR 981
+++R
Sbjct: 630 IYVR 633
Score = 306 (112.8 bits), Expect = 2.2e-52, Sum P(2) = 2.2e-52
Identities = 74/199 (37%), Positives = 108/199 (54%)
Query: 297 LPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRR 356
LP + R AL++A+SE ++V+GETG GK+TQLP+Y+ E+ A GA I TQPRR
Sbjct: 1 LPIRRHRRALVRAVSERPFLIVTGETGSGKSTQLPKYLYEAGL-AQHGA---IGVTQPRR 56
Query: 357 ISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXGVT 416
++ ++V++RVA E G LG VGY+VR + +T + + T G +
Sbjct: 57 VATISVAQRVAEEMGCALGSVVGYQVRFDDCSSEETAIKYMTDGCLLRHILADPLLSKYS 116
Query: 417 HVIVDEIHERGMNEDFL------LIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPM 470
+I+DE HER ++ D L L + MSATL + S +FG +
Sbjct: 117 IIILDEAHERSLSTDILFGLLKKLFLQNKPPGRKTEMKVVVMSATLEVDKLSEFFGHCSV 176
Query: 471 LHIPGFTYPVRAYFLENIL 489
LHIPG +YPV+ F N+L
Sbjct: 177 LHIPGRSYPVKEIFC-NLL 194
Score = 37 (18.1 bits), Expect = 2.8e-22, Sum P(2) = 2.8e-22
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 511 WKMQKQALALRKRKSSIASAVE 532
W+ K AL++ K+ I S ++
Sbjct: 531 WRAVKSALSVEKQLREITSKLK 552
>UNIPROTKB|G4NI12 [details] [associations]
symbol:MGG_17793 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0043581 "mycelium development"
evidence=IEP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0043581
EMBL:CM001236 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 RefSeq:XP_003720239.1 EnsemblFungi:MGG_17793T0
GeneID:12987242 KEGG:mgr:MGG_17793 Uniprot:G4NI12
Length = 1430
Score = 571 (206.1 bits), Expect = 7.4e-52, P = 7.4e-52
Identities = 193/692 (27%), Positives = 307/692 (44%)
Query: 357 ISAMAVSERVAAER-GEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXX-- 413
++ SER ER GE +G + + RL +G + F T GI
Sbjct: 650 VAQRVASER--GERLGESVGFRIRFDARLANRQGGT--VSFVTLGILLKQLQDGVQETLD 705
Query: 414 GVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXX-----MSATL-NAELFSSYF-- 465
+H+++DE+HER + D LL+V MSA++ N E Y
Sbjct: 706 MYSHIVIDEVHERSLELDLLLVVLKKAIAERLAKGQSLPKIILMSASISNQEQLQEYLAD 765
Query: 466 ----GGA---------PMLHIPGFTYPVRAYFLENILEMTRYRLNTYNQIDDYGQEKSWK 512
G A P+L IPG T+PV + +L+ +L M R D YG++
Sbjct: 766 SLHDGKARRLPAHQACPILSIPGRTFPVSSIYLDRLLPMIR---------DKYGEQ---- 812
Query: 513 MQKQALALRKRKSSIASAVEDALEAADFREYSVQTQQSLSCWNPDSIGFNLIEHVLCHIV 572
L L SA LE E+ + + ++L+ + + +L+ + HI
Sbjct: 813 -----LDLWLEDKPFKSAAIQYLETETSSEWDI-SDETLAERHAAYVPIDLVAATIAHIA 866
Query: 573 KKERPGAVLVFMTGWDDINSLKDQLQAHP-LLG---------DPSRVLLLACHGSMASSE 622
PG +LVF+ G +I S+ D L+ LG D S+ + H +++++E
Sbjct: 867 SSASPGDILVFLPGIKEIRSVNDVLRDRQGSLGIDFKDINFNDTSKFRIHFLHSAVSAAE 926
Query: 623 QRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWIS 682
Q IF K G R+I+LA+N+AETS+TI DVV V+D GK ++ YD + W +
Sbjct: 927 QNKIFQKVPLGCRRIILASNIAETSVTIPDVVHVVDVGKTRDRKYDRSTRITGMYTGWQT 986
Query: 683 KXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQL-GSI 741
K Q G Y LY + D LPE+L+ L + CL +K S+
Sbjct: 987 KSKAMQRQGRAGRTQEGHYYGLYSEQRRQSMKDDALPEMLKLDLTNTCLSVKGFGFRDSV 1046
Query: 742 SEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAI 801
++FL+ A+ PP P V++A+ L+ + AL ENE +T LG L +P+ P LGKM++LG
Sbjct: 1047 ADFLAAAISPPPPSVVQDAVNSLKAMDALAENEGITSLGHLLLRIPLHPLLGKMILLGVF 1106
Query: 802 FNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAER 861
F C+ P++ + A F +P A+ A QF D SDHL+ ++A++ + E+
Sbjct: 1107 FRCVGPMIVLCALHGGGSLFEVPPGSPSAAKRAHQQFRVAD-SDHLSQMKAFNHLRQLEQ 1165
Query: 862 --HQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTE-----------NCNK 908
H+ ++ L+ + Q +L + GLV E N
Sbjct: 1166 ISHREAVDFARSEHLNFAKYEEAKLTAAQIEQVLINHGLVPPRDELEHRFSSPGGVELNV 1225
Query: 909 WSHDEHLIRAVICAGLFPGLC-SVVNKEKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWL 967
S +E L++A++ GL+P + V ++LK G S V G + P +
Sbjct: 1226 NSGNEQLLKALLVKGLYPNVAVKVARSPTRMSLKAAAGG-----SGHVLLGHASVVQP-I 1279
Query: 968 VFNEKIKVNSVFLRDSTGVSDSVLLLFGGNIS 999
+E NS+F+ D + L+F N+S
Sbjct: 1280 TNHELFPKNSLFVYSELVRQDYINLMFLTNVS 1311
Score = 503 (182.1 bits), Expect = 6.8e-47, Sum P(2) = 6.8e-47
Identities = 167/564 (29%), Positives = 250/564 (44%)
Query: 230 INASMSSLSNVGSTTNDEGLYEQQEQLVQNSVVRE----RILRQRSLQMH--------EK 277
+ S+ S S++G+ T + Q Q + S V R +RSL MH +
Sbjct: 503 LEMSLDS-SSLGTMTVPRSIRSQVVQRLPASAVEHFHSNRPGARRSLWMHPLARSSLNRR 561
Query: 278 QQAWQESPEGQKMLEF----RRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQY 333
A E+ + + LE R SLP K R LL + + +V G TG GK+TQ+PQ
Sbjct: 562 LAARLEAYQADRHLEHIRAQRASLPMNKHRKQLLNLVEGSHFCIVIGATGSGKSTQVPQI 621
Query: 334 ILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEG-MKGRDT 392
IL+ + RGA I+C QPRR +AM V++RVA+ERGE+LGESVG+++R + + R
Sbjct: 622 ILDDAIKQGRGADTRILCLQPRRAAAMWVAQRVASERGERLGESVGFRIRFDARLANRQG 681
Query: 393 -RLMFCTTGIXXXXXXXXXXXX--GVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXX 449
+ F T GI +H+++DE+HER + D LL+V
Sbjct: 682 GTVSFVTLGILLKQLQDGVQETLDMYSHIVIDEVHERSLELDLLLVVLKKAIAERLAKGQ 741
Query: 450 XX-----MSATL-NAELFSSYFGGAPMLHIPGFTYPVRAYFLENILEMTRYRLNTYNQID 503
MSA++ N E Y A LH G + A+ IL + +
Sbjct: 742 SLPKIILMSASISNQEQLQEYL--ADSLH-DGKARRLPAHQACPILSIPGRTFPVSSIYL 798
Query: 504 DYGQEKSWKMQKQALALRKRKSSIASAVEDALEAADFREYSVQTQQSLSCWNPDSIGFNL 563
D + L L SA LE E+ + + ++L+ + + +L
Sbjct: 799 DRLLPMIRDKYGEQLDLWLEDKPFKSAAIQYLETETSSEWDI-SDETLAERHAAYVPIDL 857
Query: 564 IEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQLQAHP-LLG---------DPSRVLLLA 613
+ + HI PG +LVF+ G +I S+ D L+ LG D S+ +
Sbjct: 858 VAATIAHIASSASPGDILVFLPGIKEIRSVNDVLRDRQGSLGIDFKDINFNDTSKFRIHF 917
Query: 614 CHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNT 673
H +++++EQ IF K G R+I+LA+N+AETS+TI DVV V+D GK ++ YD
Sbjct: 918 LHSAVSAAEQNKIFQKVPLGCRRIILASNIAETSVTIPDVVHVVDVGKTRDRKYDRSTRI 977
Query: 674 PCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQI 733
+ W +K Q G Y LY + D LPE+L+ L + CL +
Sbjct: 978 TGMYTGWQTKSKAMQRQGRAGRTQEGHYYGLYSEQRRQSMKDDALPEMLKLDLTNTCLSV 1037
Query: 734 KSLQLGSISEFLSRALQPPEPLSV 757
K A P P SV
Sbjct: 1038 KGFGFRDSVADFLAAAISPPPPSV 1061
Score = 76 (31.8 bits), Expect = 6.8e-47, Sum P(2) = 6.8e-47
Identities = 30/102 (29%), Positives = 52/102 (50%)
Query: 910 SHDEHLIRAVICAGLFPGLC-SVVNKEKSIALKTME--DGQVLLYSNSVNAGVPKIP-YP 965
S +E L++A++ GL+P + V ++LK G VLL SV + +P
Sbjct: 1227 SGNEQLLKALLVKGLYPNVAVKVARSPTRMSLKAAAGGSGHVLLGHASVVQPITNHELFP 1286
Query: 966 ---WLVFNEKIK---VNSVFLRDSTGV-SDSVLLLFGGNISR 1000
V++E ++ +N +FL + + + S VL LFGG++ R
Sbjct: 1287 KNSLFVYSELVRQDYINLMFLTNVSHLESPLVLALFGGSLLR 1328
>POMBASE|SPAPB1A10.06c [details] [associations]
symbol:SPAPB1A10.06c "ATP-dependent RNA helicase Dhr1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0030490 "maturation of SSU-rRNA" evidence=ISO] [GO:0032040
"small-subunit processome" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAPB1A10.06c
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 GO:GO:0032040
GO:GO:0030490 HOGENOM:HOG000201240 KO:K14780 OMA:HQLKREE
OrthoDB:EOG4KM2B8 EMBL:AB027915 RefSeq:NP_593520.1
ProteinModelPortal:Q9HDY4 STRING:Q9HDY4
EnsemblFungi:SPAPB1A10.06c.1 GeneID:2543371 KEGG:spo:SPAPB1A10.06c
NextBio:20804386 Uniprot:Q9HDY4
Length = 1183
Score = 367 (134.2 bits), Expect = 8.3e-52, Sum P(4) = 8.3e-52
Identities = 84/260 (32%), Positives = 139/260 (53%)
Query: 588 DDINSLKDQLQAHPLLGDPSRVL-LLACHGSMASSEQRLIFDKPEDGVRKIVLATNMAET 646
+DI+ + + D S + +L + + + +Q +FD +G R ++ATN+AET
Sbjct: 680 EDIDQVPTSSSSSVTYDDESEPMYVLPLYSLLTTEDQMKVFDSSPEGHRMCIVATNVAET 739
Query: 647 SITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYP 706
SITI ++ +V+DCGKAKE Y+ + WISK PG CY LY
Sbjct: 740 SITIPNIRYVVDCGKAKERVYNEKTSVQKFEVRWISKANADQRAGRAGRTGPGHCYRLYS 799
Query: 707 RYVYDA-FADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPEPLSVKNAIEYLQ 765
V+D+ F + LPE+LRTP++S+ LQ+K++ + +I+ F P ++ +++ L
Sbjct: 800 SAVFDSSFPLHSLPEILRTPVESIVLQMKNMNIDNIANFPFPT--SPGRSRLEKSLKLLS 857
Query: 766 IIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPF 825
+GA+D LT LG +S+ P+ P+ KMLI+G CL V+ +V+ LS+ F+
Sbjct: 858 NLGAIDSEGVLTKLGEQMSLFPLSPRFSKMLIIGQQHGCLPYVIALVSALSINQLFV--- 914
Query: 826 DKKDLAESAKAQFSARDYSD 845
K+ L A + S + +D
Sbjct: 915 SKQSLLYDAHDKNSRSEETD 934
Score = 233 (87.1 bits), Expect = 8.3e-52, Sum P(4) = 8.3e-52
Identities = 52/144 (36%), Positives = 77/144 (53%)
Query: 292 EFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIIC 351
E R +LP E +++ I N VV++ G TG GKTTQLPQ++ E+ + +I
Sbjct: 393 ESRLALPIVAEEQRIMEQIFANDVVIICGATGSGKTTQLPQFLFEAGFSSPESENPGMIA 452
Query: 352 -TQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXX 410
TQPRR++A+++++RV+ E V Y++R + DT + F T GI
Sbjct: 453 ITQPRRVAAVSIAKRVSEEL-TGFSSKVSYQIRFDSTINPDTAIKFMTDGILLRELSSDF 511
Query: 411 XXXGVTHVIVDEIHERGMNEDFLL 434
+ VIVDE HER +N D LL
Sbjct: 512 LLTAYSAVIVDEAHERSVNTDILL 535
Score = 64 (27.6 bits), Expect = 8.3e-52, Sum P(4) = 8.3e-52
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 847 LALVRAYDGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLK 894
L+ V AYD D + +C +N+L + L+ + +LRKQ + LLK
Sbjct: 974 LSAVCAYDYASDKRK------FCKENYLREKALEEVTNLRKQIIGLLK 1015
Score = 59 (25.8 bits), Expect = 8.3e-52, Sum P(4) = 8.3e-52
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 539 DFREYSVQTQQSLSCWNPDSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQLQ 598
D R+Y V + + PD + + + V C I K+ G++LVF+TG ++ L L+
Sbjct: 589 DARQYPVSIHFNRTT-KPDYLQ-DAFDKV-CLIHKRLPAGSILVFLTGQQEVEQLCQMLR 645
Score = 47 (21.6 bits), Expect = 2.0e-16, Sum P(3) = 2.0e-16
Identities = 17/67 (25%), Positives = 28/67 (41%)
Query: 719 PELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTV 778
P+ L+ +CL K L GSI FL+ Q E L +++ L + V
Sbjct: 605 PDYLQDAFDKVCLIHKRLPAGSILVFLT-GQQEVEQLCQMLRKRFVRSFRPLKSRARIVV 663
Query: 779 LGRNLSM 785
+ +S+
Sbjct: 664 SRKTMSV 670
Score = 42 (19.8 bits), Expect = 1.9e-30, Sum P(3) = 1.9e-30
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 175 LHSRQYAKVVVFSKAPLPNYRSDLDEK 201
+ +RQY + F++ P+Y D +K
Sbjct: 588 IDARQYPVSIHFNRTTKPDYLQDAFDK 614
>TIGR_CMR|CPS_2243 [details] [associations]
symbol:CPS_2243 "ATP-dependent helicase HrpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004386
"helicase activity" evidence=ISS] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_268968.1 ProteinModelPortal:Q482P9 STRING:Q482P9
GeneID:3518699 KEGG:cps:CPS_2243 PATRIC:21467591
BioCyc:CPSY167879:GI48-2313-MONOMER Uniprot:Q482P9
Length = 1375
Score = 328 (120.5 bits), Expect = 1.0e-51, Sum P(2) = 1.0e-51
Identities = 100/337 (29%), Positives = 166/337 (49%)
Query: 578 GAVLVFMTGWDDINSLKDQLQAHPLLGDPSRVLLLACHGSMASSEQRLIFDKPEDGVRKI 637
G +LVF+ G +I L L + VL L + + SEQ IF KP G R I
Sbjct: 325 GDILVFLNGEREIRDTAAALVKANLRH--TNVLPL--YARLTVSEQNQIF-KPHSG-RNI 378
Query: 638 VLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXXXVQ 697
VLATN+AETS+T+ + +VID G A+ + Y L +S+ V
Sbjct: 379 VLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPVSQASANQRSGRCGRVS 438
Query: 698 PGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPEPLSV 757
G C LY Y + A++ PE+LRT L ++ LQ+ +L LG I+ F ++ P+ ++
Sbjct: 439 EGICIRLYSEDDYKSRAEFTDPEILRTNLATVILQMHALDLGDIANF--PFVEAPDNRNI 496
Query: 758 KNAIEYLQIIGALDENEN---------------LTVLGRNLSMLPVEPKLGKMLILGAIF 802
+ + L+ I A++ EN LT GR L+ P++P+L KM++ F
Sbjct: 497 TDGVRLLEEIAAVESIENADKNAKGKASSTATQLTKSGRLLAKFPIDPRLAKMVVSSIEF 556
Query: 803 NCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSARDYSDHLALVRAY----DGWKD 858
C++ ++ +V+ LS++DP P +K+ L++ +F + SD ++L+ + + KD
Sbjct: 557 GCIEQILIIVSALSIQDPRERPHEKQQLSDEKHNRFKDKS-SDFISLLNLWQYINEQKKD 615
Query: 859 AERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKD 895
++Q + C + FLS L+ + Q LK+
Sbjct: 616 LTQNQFR-KLCQREFLSYVRLREWQDIFSQLKLTLKE 651
Score = 304 (112.1 bits), Expect = 1.0e-51, Sum P(2) = 1.0e-51
Identities = 101/307 (32%), Positives = 143/307 (46%)
Query: 211 FGLLREVDAHLKAYLSQKYINASMSSLSNVGSTTNDE----GLYEQQEQLVQNSVVRERI 266
F LL + ++ IN + VG + E L E+ +LV+ +++ I
Sbjct: 19 FELLPQAKKSDAVRFRKRLINLKKTITKEVGQKSPTELAMLSLSEKHIKLVEP--LQQHI 76
Query: 267 LRQRSLQMHEKQQAWQESPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGK 326
LR S+Q +KQQ + P+ + + LP + + AI NQVV+++GETG GK
Sbjct: 77 LR--SIQ--DKQQKIRSLPK----ITYPEGLPISENAAQISAAIDANQVVIIAGETGSGK 128
Query: 327 TTQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEG 386
TTQ+P+ LE RG I TQPRRI+A V+ R+A E G KLGE VGYKVR
Sbjct: 129 TTQIPKICLE----LGRGVDGLIGHTQPRRIAARTVANRIAEELGTKLGEQVGYKVRFND 184
Query: 387 MKGRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXX 446
+ + T GI +I+DE HER +N DF+L
Sbjct: 185 QVSEQSYIKLMTDGILLAEMQRDRLLLKYDTIIIDEAHERSLNIDFILGYLKQILIKRPD 244
Query: 447 XXXXXMSATLNAELFSSYFGG-----APMLHIPGFTYPVRAYFLENILEMTRYR-LNTYN 500
SAT++ + F+ +F AP++ + G T+PV EM RYR LN
Sbjct: 245 LKLIITSATIDPQRFAKHFSSKNGLPAPIIEVSGRTFPV---------EM-RYRPLNDRA 294
Query: 501 QIDDYGQ 507
IDD Q
Sbjct: 295 VIDDDDQ 301
Score = 40 (19.1 bits), Expect = 2.0e-21, Sum P(2) = 2.0e-21
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 547 TQQSLSCWNPDSIGFNLIEHVLC 569
T LS + I FN+IE V C
Sbjct: 793 TLYGLSIVSKRKINFNVIEPVTC 815
>UNIPROTKB|F1S235 [details] [associations]
symbol:LOC100519272 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:CU694896
RefSeq:XP_003131712.1 Ensembl:ENSSSCT00000019229 GeneID:100519272
KEGG:ssc:100519272 Uniprot:F1S235
Length = 779
Score = 336 (123.3 bits), Expect = 5.8e-51, Sum P(2) = 5.8e-51
Identities = 114/437 (26%), Positives = 209/437 (47%)
Query: 564 IEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQL--QAHPL-----LGDPSR--VLLLAC 614
I V I E G +LVF+TG +I + L A + + D + +L+L C
Sbjct: 259 IVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPC 318
Query: 615 HGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTP 674
+GSM + +QR IF P G+RK V++TN++ TS+TI+ + +V+D G K+ +++
Sbjct: 319 YGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLD 378
Query: 675 CLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYD-AFADYQLPELLRTPLQSLCLQI 733
L ISK G+C+ +Y + ++ D+ +PE+ RT L S+ L +
Sbjct: 379 ILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTL 438
Query: 734 KSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLG 793
K L + + F L PP + A++ L A+D + ++T LG ++ P+ P L
Sbjct: 439 KCLAIHDVIRF--PYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLT 496
Query: 794 KMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFD---KKDLAESAKAQFSAR--DYSDHLA 848
+I A +C D ++ + A LSV + F+ P D +K+ AE + +A+ ++D
Sbjct: 497 CAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKE-AEQRHRELAAKAGGFNDFAT 555
Query: 849 LVRAYDGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNK 908
L ++ K + S + W ++ + +++ ++ + LK R T K
Sbjct: 556 LAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETFEGPK 615
Query: 909 WSHDEHLIRAVICAGLFPGLCSVVNKEKSIALKTMEDGQ---VLLY-SNSVNAGVPKIPY 964
H+ ++R +CAG F +V + TM DG+ V ++ S++++ K+
Sbjct: 616 --HE--VLRRCLCAGYFK---NVARRSVGRTFCTM-DGRGSPVHIHPSSALHEQETKLE- 666
Query: 965 PWLVFNEKIKVNSVFLR 981
W++F+E + V+ R
Sbjct: 667 -WIIFHEVLVTTKVYAR 682
Score = 280 (103.6 bits), Expect = 5.8e-51, Sum P(2) = 5.8e-51
Identities = 78/252 (30%), Positives = 127/252 (50%)
Query: 252 QQEQLVQNSVVRERILRQRSLQMHEKQQAWQESPEGQKMLEFRRSLPSYKERDALLKAIS 311
+QE+ ++ ++E R ++ + ++++ S EG F P K+R L++A+
Sbjct: 14 RQEEGERSRDLQEE--RPSAVTIADREEKGCTSQEGGTTPTF----PIQKQRKKLIQAVR 67
Query: 312 ENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERG 371
+N ++V+G TG GKTTQLP+Y+ E+ + G I TQPR+++A++V++RVA E
Sbjct: 68 DNSFLIVTGNTGSGKTTQLPKYLYEAGF-SQHGM---IGVTQPRKVAAISVAQRVAEEMK 123
Query: 372 EKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNED 431
LG VGY+VR + ++T + + T G + +I+DE HER + D
Sbjct: 124 CTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTD 183
Query: 432 FLL-----IVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYFLE 486
L + MSAT+ S++FG P+ IPG YPVR F
Sbjct: 184 ILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFC- 242
Query: 487 NILEMTRYRLNT 498
N++ R R NT
Sbjct: 243 NLIG-PRDRENT 253
>MGI|MGI:1914737 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:1914737
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL592222 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT EMBL:AK004610
EMBL:AK010512 EMBL:AK031000 EMBL:AK075991 EMBL:AL596111
EMBL:BC058276 IPI:IPI00453964 RefSeq:NP_080467.3 UniGene:Mm.260627
ProteinModelPortal:Q6PE54 SMR:Q6PE54 STRING:Q6PE54
PhosphoSite:Q6PE54 PaxDb:Q6PE54 PRIDE:Q6PE54
Ensembl:ENSMUST00000018569 GeneID:67487 KEGG:mmu:67487
UCSC:uc007ktc.1 InParanoid:Q6PE54 OrthoDB:EOG48PMJH NextBio:324718
Bgee:Q6PE54 CleanEx:MM_DHX40 Genevestigator:Q6PE54
GermOnline:ENSMUSG00000018425 Uniprot:Q6PE54
Length = 779
Score = 335 (123.0 bits), Expect = 5.8e-51, Sum P(2) = 5.8e-51
Identities = 114/437 (26%), Positives = 208/437 (47%)
Query: 564 IEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQL--QAHPL-----LGDPSR--VLLLAC 614
I V I E G +LVF+TG +I + L A + + D + +L+L C
Sbjct: 259 IVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPC 318
Query: 615 HGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTP 674
+GSM + +QR IF P G+RK V++TN++ TS+TI+ + +V+D G K+ +++
Sbjct: 319 YGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLD 378
Query: 675 CLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYD-AFADYQLPELLRTPLQSLCLQI 733
L ISK G+C+ +Y + + D+ +PE+ RT L S+ L +
Sbjct: 379 ILEVVPISKSEALQRSGRAGRTASGKCFRIYSKEFWSQCMPDHVIPEIKRTSLTSVVLTL 438
Query: 734 KSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLG 793
K L + + F L PP + A++ L A+D + ++T LG ++ P+ P L
Sbjct: 439 KCLAIHDVIRF--PYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLT 496
Query: 794 KMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFD---KKDLAESAKAQFSAR--DYSDHLA 848
+I A +C D ++ + A LSV + F+ P D +K+ AE + +A+ ++D
Sbjct: 497 CAVIRAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKE-AEQRHRELAAKAGGFNDFAT 555
Query: 849 LVRAYDGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNK 908
L ++ K + S + W ++ + +++ ++ + LK R T K
Sbjct: 556 LAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETFEGPK 615
Query: 909 WSHDEHLIRAVICAGLFPGLCSVVNKEKSIALKTMEDGQ---VLLY-SNSVNAGVPKIPY 964
H+ ++R +CAG F +V + TM DG+ V ++ S++++ K+
Sbjct: 616 --HE--VLRRCLCAGYFK---NVARRSVGRTFCTM-DGRGSPVHIHPSSALHEQETKLE- 666
Query: 965 PWLVFNEKIKVNSVFLR 981
W++F+E + V+ R
Sbjct: 667 -WIIFHEVLVTTKVYAR 682
Score = 281 (104.0 bits), Expect = 5.8e-51, Sum P(2) = 5.8e-51
Identities = 75/236 (31%), Positives = 119/236 (50%)
Query: 268 RQRSLQMHEKQQAWQESPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKT 327
R ++++ ++++ S EG F P K+R L++A+ +N ++V+G TG GKT
Sbjct: 28 RPSAVRIADREEKGCTSQEGGTTPTF----PIQKQRKKLIQAVRDNSFLIVTGNTGSGKT 83
Query: 328 TQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGM 387
TQLP+Y+ E+ + G I TQPR+++A++V++RVA E LG VGY+VR +
Sbjct: 84 TQLPKYLYEAGF-SQHGM---IGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDC 139
Query: 388 KGRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLL-----IVXXXXXX 442
++T + + T G + +I+DE HER + D L +
Sbjct: 140 SSKETAIKYMTDGCLLKHILGDPNLSKFSVIILDEAHERTLTTDILFGLLKKLFQDKSPN 199
Query: 443 XXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYFLENILEMTRYRLNT 498
MSAT+ S++FG P+ IPG YPVR F N++ R R NT
Sbjct: 200 RKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFC-NLIG-PRDRENT 253
>UNIPROTKB|E2RPC8 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03006584 EMBL:AAEX03006585
Ensembl:ENSCAFT00000027962 Uniprot:E2RPC8
Length = 781
Score = 336 (123.3 bits), Expect = 5.8e-51, Sum P(2) = 5.8e-51
Identities = 114/437 (26%), Positives = 207/437 (47%)
Query: 564 IEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQL--QAHPL-----LGDPSR--VLLLAC 614
I V I E G +LVF+TG +I + L A + + D + +L+L C
Sbjct: 259 IVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPC 318
Query: 615 HGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTP 674
+GSM + +QR IF P G+RK V++TN++ TS+TI+ + +V+D G K+ +++
Sbjct: 319 YGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLD 378
Query: 675 CLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYD-AFADYQLPELLRTPLQSLCLQI 733
L ISK G+C+ +Y + ++ D+ +PE+ RT L S+ L +
Sbjct: 379 ILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTL 438
Query: 734 KSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLG 793
K L + + F L PP + A++ L A+D + ++T LG ++ P+ P L
Sbjct: 439 KCLAIHDVIRF--PYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLT 496
Query: 794 KMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFD---KKDLAESAKAQFSAR--DYSDHLA 848
+I A +C D ++ + A LSV + F+ P D +K+ AE + +A+ ++D
Sbjct: 497 CAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKE-AEQRHRELAAKAGGFNDFAT 555
Query: 849 LVRAYDGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNK 908
L ++ K + S + W ++ + +++ ++ + LK R T K
Sbjct: 556 LAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETFEGPK 615
Query: 909 WSHDEHLIRAVICAGLFPGLCSVVNKEKSIALKTMEDGQ---VLLYSN-SVNAGVPKIPY 964
H+ ++R +CAG F +V + TM DG+ V ++ N ++ K+
Sbjct: 616 --HE--VLRRCLCAGYFK---NVARRSVGRTFCTM-DGRGSPVHIHQNCKLHEQETKLE- 666
Query: 965 PWLVFNEKIKVNSVFLR 981
W++F+E + V+ R
Sbjct: 667 -WIIFHEVLVTTKVYAR 682
Score = 280 (103.6 bits), Expect = 5.8e-51, Sum P(2) = 5.8e-51
Identities = 75/236 (31%), Positives = 118/236 (50%)
Query: 268 RQRSLQMHEKQQAWQESPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKT 327
R ++ + ++++ S EG F P K+R L++A+ +N ++V+G TG GKT
Sbjct: 28 RPSAVSIADREEKGCTSQEGGTTPTF----PIQKQRKKLIQAVRDNSFLIVTGNTGSGKT 83
Query: 328 TQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGM 387
TQLP+Y+ E+ + G I TQPR+++A++V++RVA E LG VGY+VR +
Sbjct: 84 TQLPKYLYEAGF-SQHGM---IGVTQPRKVAAISVAQRVAEEMKCALGSKVGYQVRFDDC 139
Query: 388 KGRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLL-----IVXXXXXX 442
++T + + T G + +I+DE HER + D L +
Sbjct: 140 SSKETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPN 199
Query: 443 XXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYFLENILEMTRYRLNT 498
MSAT+ S++FG P+ IPG YPVR F N++ R R NT
Sbjct: 200 RKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFC-NLIG-PRDRENT 253
>UNIPROTKB|Q08DS9 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104421 CTD:79665
OMA:LYGSMPT EMBL:DAAA02048338 EMBL:BC123581 IPI:IPI00715479
RefSeq:NP_001070365.1 UniGene:Bt.63706 Ensembl:ENSBTAT00000023753
GeneID:533484 KEGG:bta:533484 InParanoid:Q08DS9 NextBio:20876051
Uniprot:Q08DS9
Length = 779
Score = 336 (123.3 bits), Expect = 7.3e-51, Sum P(2) = 7.3e-51
Identities = 114/437 (26%), Positives = 209/437 (47%)
Query: 564 IEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQL--QAHPL-----LGDPSR--VLLLAC 614
I V I E G +LVF+TG +I + L A + + D + +L+L C
Sbjct: 259 IVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPC 318
Query: 615 HGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTP 674
+GSM + +QR IF P G+RK V++TN++ TS+TI+ + +V+D G K+ +++
Sbjct: 319 YGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLD 378
Query: 675 CLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYD-AFADYQLPELLRTPLQSLCLQI 733
L ISK G+C+ +Y + ++ D+ +PE+ RT L S+ L +
Sbjct: 379 ILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTL 438
Query: 734 KSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLG 793
K L + + F L PP + A++ L A+D + ++T LG ++ P+ P L
Sbjct: 439 KCLAIHDVIRF--PYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLT 496
Query: 794 KMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFD---KKDLAESAKAQFSAR--DYSDHLA 848
+I A +C D ++ + A LSV + F+ P D +K+ AE + +A+ ++D
Sbjct: 497 CAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKE-AEQRHRELAAKAGGFNDFAT 555
Query: 849 LVRAYDGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNK 908
L ++ K + S + W ++ + +++ ++ + LK R T K
Sbjct: 556 LAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETFEGPK 615
Query: 909 WSHDEHLIRAVICAGLFPGLCSVVNKEKSIALKTMEDGQ---VLLY-SNSVNAGVPKIPY 964
H+ ++R +CAG F +V + TM DG+ V ++ S++++ K+
Sbjct: 616 --HE--VLRRCLCAGYFK---NVARRSVGRTFCTM-DGRGSPVHIHPSSALHEQETKLE- 666
Query: 965 PWLVFNEKIKVNSVFLR 981
W++F+E + V+ R
Sbjct: 667 -WIIFHEVLVTTKVYAR 682
Score = 279 (103.3 bits), Expect = 7.3e-51, Sum P(2) = 7.3e-51
Identities = 70/208 (33%), Positives = 107/208 (51%)
Query: 296 SLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPR 355
+ P K+R L++A+ +N ++V+G TG GKTTQLP+Y+ E+ + G I TQPR
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGF-SQHGM---IGVTQPR 107
Query: 356 RISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXGV 415
+++A++V++RVA E LG VGY+VR + ++T + + T G
Sbjct: 108 KVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKF 167
Query: 416 THVIVDEIHERGMNEDFLL-----IVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPM 470
+ +I+DE HER + D L + MSAT+ S++FG P+
Sbjct: 168 SVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPI 227
Query: 471 LHIPGFTYPVRAYFLENILEMTRYRLNT 498
IPG YPVR F N++ R R NT
Sbjct: 228 FDIPGRLYPVREKFC-NLIG-PRDRENT 253
>RGD|1359618 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1359618 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT
OrthoDB:EOG48PMJH EMBL:BC083821 IPI:IPI00369962
RefSeq:NP_001005873.1 UniGene:Rn.29182 ProteinModelPortal:Q5XI69
PhosphoSite:Q5XI69 Ensembl:ENSRNOT00000006926 GeneID:287595
KEGG:rno:287595 InParanoid:Q5XI69 NextBio:626568
ArrayExpress:Q5XI69 Genevestigator:Q5XI69
GermOnline:ENSRNOG00000004549 Uniprot:Q5XI69
Length = 779
Score = 335 (123.0 bits), Expect = 7.4e-51, Sum P(2) = 7.4e-51
Identities = 114/437 (26%), Positives = 209/437 (47%)
Query: 564 IEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQL--QAHPL-----LGDPSR--VLLLAC 614
I V I E G +LVF+TG +I + L A + + D + +L+L C
Sbjct: 259 IVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPC 318
Query: 615 HGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTP 674
+GSM + +QR IF P G+RK V++TN++ TS+TI+ + +V+D G K+ +++
Sbjct: 319 YGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLD 378
Query: 675 CLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYD-AFADYQLPELLRTPLQSLCLQI 733
L ISK G+C+ +Y + ++ D+ +PE+ RT L S+ L +
Sbjct: 379 ILEVVPISKSEALQRSGRAGRTASGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTL 438
Query: 734 KSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLG 793
K L + + F L PP + A++ L A+D + ++T LG ++ P+ P L
Sbjct: 439 KCLAIHDVIRF--PYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLT 496
Query: 794 KMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFD---KKDLAESAKAQFSAR--DYSDHLA 848
+I A +C D ++ + A LSV + F+ P D +K+ AE + +A+ ++D
Sbjct: 497 CAVIRAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKE-AEQKHRELAAKAGGFNDFAT 555
Query: 849 LVRAYDGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNK 908
L ++ K + S + W ++ + +++ ++ + LK R T K
Sbjct: 556 LAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETFEGPK 615
Query: 909 WSHDEHLIRAVICAGLFPGLCSVVNKEKSIALKTMEDGQ---VLLY-SNSVNAGVPKIPY 964
H+ ++R +CAG F +V + TM DG+ V ++ S++++ K+
Sbjct: 616 --HE--VLRRCLCAGYFK---NVARRSVGRTFCTM-DGRGSPVHIHPSSALHEQETKLE- 666
Query: 965 PWLVFNEKIKVNSVFLR 981
W++F+E + V+ R
Sbjct: 667 -WIIFHEVLVTTKVYAR 682
Score = 280 (103.6 bits), Expect = 7.4e-51, Sum P(2) = 7.4e-51
Identities = 75/236 (31%), Positives = 119/236 (50%)
Query: 268 RQRSLQMHEKQQAWQESPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKT 327
R ++++ ++++ S EG F P K+R L++A+ +N ++V+G TG GKT
Sbjct: 28 RPSAVRIADREEKGCTSQEGGTTPTF----PIQKQRKKLIQAVRDNSFLIVTGNTGSGKT 83
Query: 328 TQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGM 387
TQLP+Y+ E+ + G I TQPR+++A++V++RVA E LG VGY+VR +
Sbjct: 84 TQLPKYLYEAGF-SQHGM---IGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDC 139
Query: 388 KGRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLL-----IVXXXXXX 442
++T + + T G + +I+DE HER + D L +
Sbjct: 140 SSKETAIKYMTDGCLLKHILGDPNLNKFSVIILDEAHERTLTTDILFGLLKKLFQDKSPN 199
Query: 443 XXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYFLENILEMTRYRLNT 498
MSAT+ S++FG P+ IPG YPVR F N++ R R NT
Sbjct: 200 RKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFC-NLIG-PRDRENT 253
>UNIPROTKB|Q5JP46 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOVERGEN:HBG039428 UniGene:Hs.485060
HGNC:HGNC:2739 IPI:IPI00292510 SMR:Q5JP46 Ensembl:ENST00000383576
UCSC:uc011ijt.2 Uniprot:Q5JP46
Length = 560
Score = 456 (165.6 bits), Expect = 7.8e-51, Sum P(2) = 7.8e-51
Identities = 131/423 (30%), Positives = 211/423 (49%)
Query: 577 PGAVLVFMTGWDDINSLKDQLQAH-PLLGDPSRVLL-LACHGSMASSEQRLIFDKPEDGV 634
PG +LVF+TG ++I + + LQ LG R LL L + ++ S Q IF G
Sbjct: 127 PGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA 186
Query: 635 RKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXX 694
RK+V+ATN+AETS+TI +++V+D G K+ SY+ L + SK
Sbjct: 187 RKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAG 246
Query: 695 XVQPGECYHLYPRYVYD-AFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPE 753
V G+C+ LY + Y + +PE+ RT L ++ L +KSL + + F L PP
Sbjct: 247 RVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHF--DFLDPPP 304
Query: 754 PLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVA 813
++ A+E L +GAL+ LT GR ++ LPV+P L KM++ ++C + ++TV A
Sbjct: 305 YETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAA 364
Query: 814 GLSVRDP-FLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGY--EYCW 870
LSV + F P DK A++A+ F DHL L+ Y W AE SGY ++C+
Sbjct: 365 MLSVNNSIFYRPKDKVVHADNARVNFFLPG-GDHLVLLNVYTQW--AE---SGYSSQWCY 418
Query: 871 KNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDEHLIRAVICAGLFPGLCS 930
+NF+ ++++ +R+Q GL++R + D +R I AG F
Sbjct: 419 ENFVQFRSMRRARDVREQL------EGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTAR 472
Query: 931 VVNKEKSIALKTMEDGQ-VLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVSDS 989
+ +T++ Q V ++ NS + + P WL+++E + F+R + S
Sbjct: 473 LTRS----GYRTVKQQQTVFIHPNS--SLFEQQPR-WLLYHELVLTTKEFMRQVLEIESS 525
Query: 990 VLL 992
LL
Sbjct: 526 WLL 528
Score = 108 (43.1 bits), Expect = 7.8e-51, Sum P(2) = 7.8e-51
Identities = 23/67 (34%), Positives = 35/67 (52%)
Query: 418 VIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFT 477
V+VDE HER ++ D L + SAT++ FS++F GAP+ IPG
Sbjct: 36 VMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDGAPVFRIPGRR 95
Query: 478 YPVRAYF 484
+PV ++
Sbjct: 96 FPVDIFY 102
>UNIPROTKB|J9NVQ3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AAEX03006584
EMBL:AAEX03006585 Ensembl:ENSCAFT00000048714 Uniprot:J9NVQ3
Length = 857
Score = 336 (123.3 bits), Expect = 8.8e-51, Sum P(2) = 8.8e-51
Identities = 114/437 (26%), Positives = 209/437 (47%)
Query: 564 IEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQL--QAHPL-----LGDPSR--VLLLAC 614
I V I E G +LVF+TG +I + L A + + D + +L+L C
Sbjct: 337 IVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPC 396
Query: 615 HGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTP 674
+GSM + +QR IF P G+RK V++TN++ TS+TI+ + +V+D G K+ +++
Sbjct: 397 YGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLD 456
Query: 675 CLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYD-AFADYQLPELLRTPLQSLCLQI 733
L ISK G+C+ +Y + ++ D+ +PE+ RT L S+ L +
Sbjct: 457 ILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTL 516
Query: 734 KSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLG 793
K L + + F L PP + A++ L A+D + ++T LG ++ P+ P L
Sbjct: 517 KCLAIHDVIRF--PYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLT 574
Query: 794 KMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFD---KKDLAESAKAQFSAR--DYSDHLA 848
+I A +C D ++ + A LSV + F+ P D +K+ AE + +A+ ++D
Sbjct: 575 CAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKE-AEQRHRELAAKAGGFNDFAT 633
Query: 849 LVRAYDGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNK 908
L ++ K + S + W ++ + +++ ++ + LK R T K
Sbjct: 634 LAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETFEGPK 693
Query: 909 WSHDEHLIRAVICAGLFPGLCSVVNKEKSIALKTMEDGQ---VLLY-SNSVNAGVPKIPY 964
H+ ++R +CAG F +V + TM DG+ V ++ S++++ K+
Sbjct: 694 --HE--VLRRCLCAGYFK---NVARRSVGRTFCTM-DGRGSPVHIHPSSALHEQETKLE- 744
Query: 965 PWLVFNEKIKVNSVFLR 981
W++F+E + V+ R
Sbjct: 745 -WIIFHEVLVTTKVYAR 760
Score = 280 (103.6 bits), Expect = 8.8e-51, Sum P(2) = 8.8e-51
Identities = 75/236 (31%), Positives = 118/236 (50%)
Query: 268 RQRSLQMHEKQQAWQESPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKT 327
R ++ + ++++ S EG F P K+R L++A+ +N ++V+G TG GKT
Sbjct: 106 RPSAVSIADREEKGCTSQEGGTTPTF----PIQKQRKKLIQAVRDNSFLIVTGNTGSGKT 161
Query: 328 TQLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGM 387
TQLP+Y+ E+ + G I TQPR+++A++V++RVA E LG VGY+VR +
Sbjct: 162 TQLPKYLYEAGF-SQHGM---IGVTQPRKVAAISVAQRVAEEMKCALGSKVGYQVRFDDC 217
Query: 388 KGRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLL-----IVXXXXXX 442
++T + + T G + +I+DE HER + D L +
Sbjct: 218 SSKETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPN 277
Query: 443 XXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAYFLENILEMTRYRLNT 498
MSAT+ S++FG P+ IPG YPVR F N++ R R NT
Sbjct: 278 RKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFC-NLIG-PRDRENT 331
>UNIPROTKB|Q8IX18 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOVERGEN:HBG039428 EMBL:AF461690 EMBL:AF260270
EMBL:AK025713 EMBL:AK095681 EMBL:BC024187 EMBL:AL832510
EMBL:AF319521 IPI:IPI00410110 IPI:IPI00797226 IPI:IPI01010408
RefSeq:NP_001159773.1 RefSeq:NP_078888.4 UniGene:Hs.29403
ProteinModelPortal:Q8IX18 SMR:Q8IX18 IntAct:Q8IX18 STRING:Q8IX18
PhosphoSite:Q8IX18 DMDM:116247771 PaxDb:Q8IX18 PRIDE:Q8IX18
DNASU:79665 Ensembl:ENST00000251241 GeneID:79665 KEGG:hsa:79665
UCSC:uc002ixn.2 CTD:79665 GeneCards:GC17P057642 HGNC:HGNC:18018
HPA:HPA044350 MIM:607570 neXtProt:NX_Q8IX18 PharmGKB:PA27227
InParanoid:Q8IX18 OMA:LYGSMPT PhylomeDB:Q8IX18 ChiTaRS:DHX40
GenomeRNAi:79665 NextBio:68866 ArrayExpress:Q8IX18 Bgee:Q8IX18
CleanEx:HS_DHX40 Genevestigator:Q8IX18 GermOnline:ENSG00000108406
Uniprot:Q8IX18
Length = 779
Score = 333 (122.3 bits), Expect = 2.6e-50, Sum P(2) = 2.6e-50
Identities = 113/437 (25%), Positives = 209/437 (47%)
Query: 564 IEHVLCHIVKKERPGAVLVFMTGWDDINSLKDQL--QAHPL-----LGDPSR--VLLLAC 614
I V I E G +LVF+TG +I + L A + + D + +L+L C
Sbjct: 259 IVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPC 318
Query: 615 HGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTP 674
+GSM + +QR IF P G+RK V++TN++ TS+TI+ + +V+D G K+ +++
Sbjct: 319 YGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLD 378
Query: 675 CLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYD-AFADYQLPELLRTPLQSLCLQI 733
L ISK G+C+ +Y + ++ D+ +PE+ RT L S+ L +
Sbjct: 379 ILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTL 438
Query: 734 KSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLG 793
K L + + F L PP + A++ L A+D + ++T LG ++ P+ P L
Sbjct: 439 KCLAIHDVIRF--PYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLT 496
Query: 794 KMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFD---KKDLAESAKAQFSAR--DYSDHLA 848
+I A +C D ++ + A LSV + F+ P D +K+ AE + +A+ ++D
Sbjct: 497 CAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKE-AEQRHRELAAKAGGFNDFAT 555
Query: 849 LVRAYDGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNK 908
L ++ K + S + W ++ + +++ ++ + LK + T K
Sbjct: 556 LAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPKETFEGPK 615
Query: 909 WSHDEHLIRAVICAGLFPGLCSVVNKEKSIALKTMEDGQ---VLLY-SNSVNAGVPKIPY 964
H+ ++R +CAG F +V + TM DG+ V ++ S++++ K+
Sbjct: 616 --HE--VLRRCLCAGYFK---NVARRSVGRTFCTM-DGRGSPVHIHPSSALHEQETKLE- 666
Query: 965 PWLVFNEKIKVNSVFLR 981
W++F+E + V+ R
Sbjct: 667 -WIIFHEVLVTTKVYAR 682
Score = 277 (102.6 bits), Expect = 2.6e-50, Sum P(2) = 2.6e-50
Identities = 69/208 (33%), Positives = 107/208 (51%)
Query: 296 SLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPR 355
+ P K+R +++A+ +N ++V+G TG GKTTQLP+Y+ E+ + G I TQPR
Sbjct: 52 TFPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGF-SQHGM---IGVTQPR 107
Query: 356 RISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXGV 415
+++A++V++RVA E LG VGY+VR + ++T + + T G
Sbjct: 108 KVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKF 167
Query: 416 THVIVDEIHERGMNEDFLL-----IVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPM 470
+ +I+DE HER + D L + MSAT+ S++FG P+
Sbjct: 168 SVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPI 227
Query: 471 LHIPGFTYPVRAYFLENILEMTRYRLNT 498
IPG YPVR F N++ R R NT
Sbjct: 228 FDIPGRLYPVREKFC-NLIG-PRDRENT 253
>UNIPROTKB|Q5SQH5 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:CH471081 GO:GO:0003676 EMBL:BX119957 EMBL:CR753328
EMBL:CR759778 EMBL:AL732442 EMBL:BX908728 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
UniGene:Hs.485060 HGNC:HGNC:2739 EMBL:CR788240 EMBL:AL662798
EMBL:CU013522 IPI:IPI00644906 SMR:Q5SQH5 Ensembl:ENST00000376437
Ensembl:ENST00000414052 Ensembl:ENST00000445379
Ensembl:ENST00000449861 Ensembl:ENST00000451748
Ensembl:ENST00000453879 UCSC:uc003nqy.3 Uniprot:Q5SQH5
Length = 560
Score = 456 (165.6 bits), Expect = 4.3e-50, Sum P(2) = 4.3e-50
Identities = 131/423 (30%), Positives = 211/423 (49%)
Query: 577 PGAVLVFMTGWDDINSLKDQLQAH-PLLGDPSRVLL-LACHGSMASSEQRLIFDKPEDGV 634
PG +LVF+TG ++I + + LQ LG R LL L + ++ S Q IF G
Sbjct: 127 PGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA 186
Query: 635 RKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXX 694
RK+V+ATN+AETS+TI +++V+D G K+ SY+ L + SK
Sbjct: 187 RKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAG 246
Query: 695 XVQPGECYHLYPRYVYD-AFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPE 753
V G+C+ LY + Y + +PE+ RT L ++ L +KSL + + F L PP
Sbjct: 247 RVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHF--DFLDPPP 304
Query: 754 PLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVA 813
++ A+E L +GAL+ LT GR ++ LPV+P L KM++ ++C + ++TV A
Sbjct: 305 YETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAA 364
Query: 814 GLSVRDP-FLMPFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGY--EYCW 870
LSV + F P DK A++A+ F DHL L+ Y W AE SGY ++C+
Sbjct: 365 MLSVNNSIFYRPKDKVVHADNARVNFFLPG-GDHLVLLNVYTQW--AE---SGYSSQWCY 418
Query: 871 KNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDEHLIRAVICAGLFPGLCS 930
+NF+ ++++ +R+Q GL++R + D +R I AG F
Sbjct: 419 ENFVQFRSMRRARDVREQL------EGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTAR 472
Query: 931 VVNKEKSIALKTMEDGQ-VLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVSDS 989
+ +T++ Q V ++ NS + + P WL+++E + F+R + S
Sbjct: 473 LTRS----GYRTVKQQQTVFIHPNS--SLFEQQPR-WLLYHELVLTTKEFMRQVLEIESS 525
Query: 990 VLL 992
LL
Sbjct: 526 WLL 528
Score = 101 (40.6 bits), Expect = 4.3e-50, Sum P(2) = 4.3e-50
Identities = 22/67 (32%), Positives = 34/67 (50%)
Query: 418 VIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPGFT 477
V+VDE HER ++ D L + SAT++ FS++F AP+ IPG
Sbjct: 36 VMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFRIPGRR 95
Query: 478 YPVRAYF 484
+PV ++
Sbjct: 96 FPVDIFY 102
>TAIR|locus:2125211 [details] [associations]
symbol:AT4G01020 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS50157 PROSITE:PS51194 SMART:SM00184
SMART:SM00322 SMART:SM00355 SMART:SM00490 SMART:SM00647
SMART:SM00847 Pfam:PF00097 Prosite:PS00518 GO:GO:0005524
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 HSSP:P38398 GO:GO:0008026
EMBL:AL161491 EMBL:AL080237 KO:K12818 PIR:T10542 IPI:IPI00547897
RefSeq:NP_567206.1 UniGene:At.42970 ProteinModelPortal:P0CE10
SMR:P0CE10 PRIDE:P0CE10 EnsemblPlants:AT4G01020.1 GeneID:826439
KEGG:ath:AT4G01020 GeneFarm:1806 TAIR:At4g01020
HOGENOM:HOG000084497 PhylomeDB:P0CE10 Uniprot:P0CE10
Length = 1787
Score = 361 (132.1 bits), Expect = 4.3e-49, Sum P(2) = 4.3e-49
Identities = 118/421 (28%), Positives = 198/421 (47%)
Query: 571 IVKKERPGAVLVFMTGWDDINSLKDQLQAHPLLGDPSRVLLLACHGSMASSEQRLIFDKP 630
I K E+ G +L F+T ++ ++ A PS + L HG ++ EQ ++F
Sbjct: 515 IHKTEKEGTILAFLTSQAEVEWACERFVA------PSAIAL-PLHGKLSFEEQFMVFQN- 566
Query: 631 EDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXX 690
G RK++ ATN+AETS+TI V +VID G KE+ Y+ L +S+
Sbjct: 567 YPGRRKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGMSILKVCQVSQSSARQRA 626
Query: 691 XXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQ 750
+PG CY LY + +D+ Q PE+ R L L++ +L + +I+ F +
Sbjct: 627 GRAGRTEPGRCYRLYSKTDFDSMNLNQEPEIRRVHLGVALLRMLALGIDNIAAF--EFVD 684
Query: 751 PPEPLSVKNAIEYLQIIGALDENEN---LTVLGRNLSMLPVEPKLGKMLILGAIFNCLDP 807
P P ++ AI+ L +GA+ E LT G L L +EPKLGK LILG + +
Sbjct: 685 APVPEAIAMAIQNLVQLGAVVEKNGVLELTQEGHCLVKLGLEPKLGK-LILGCFRHRMGK 743
Query: 808 VMTVVAGLSVRDPFLM----PFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQ 863
V+A + + FD K A+ K QF D D L+ Y W R +
Sbjct: 744 EGIVLAAVMANASSIFCRVGNFDDKMKADRLKVQF-CNDNGDLFTLLSVYKEWASLPRDR 802
Query: 864 SGYEYCWKNFLSAQTLKAI-DSLRKQFLFLLKDAGLVDRN--TENCNKWS-HDEHLIRAV 919
++CW+N L+A++++ D++++ + + ++ LV + N N+ + HD++L + V
Sbjct: 803 RN-KWCWENSLNAKSMRRCEDTVKELEICIERELTLVSPSYWVWNPNEGTKHDKYL-KMV 860
Query: 920 ICAGLFPGLCSVVNKEKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVF 979
I A L + ++ + QV L+ + + P W+VF E + + +
Sbjct: 861 ILASLAENVAMYTGYDQLGYEVALTSQQVQLHPSCSLLAFGQKP-SWVVFGELLSIVDQY 919
Query: 980 L 980
L
Sbjct: 920 L 920
Score = 248 (92.4 bits), Expect = 4.3e-49, Sum P(2) = 4.3e-49
Identities = 61/189 (32%), Positives = 93/189 (49%)
Query: 297 LPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRR 356
LP Y R +LK I Q++V+ GETG GK+TQL Q++ +S A+ SI+CTQPR+
Sbjct: 303 LPIYAYRRQILKKIHCEQIMVLIGETGSGKSTQLVQFLADSGVAASE----SIVCTQPRK 358
Query: 357 ISAMAVSERVAAERGEKLGES-VGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXGV 415
I+AM +++RV E E+ V + +++++ T G+
Sbjct: 359 IAAMTLTDRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGI 418
Query: 416 THVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPG 475
+ VI+DE HER +N D LL + MSAT +A S Y +LH+ G
Sbjct: 419 SCVIIDEAHERSLNTDLLLALLRKLLSRRIDLRLVIMSATADANQLSQYLFDCGILHVNG 478
Query: 476 FTYPVRAYF 484
+PV +
Sbjct: 479 RNFPVEIVY 487
>TAIR|locus:2142459 [details] [associations]
symbol:AT5G10370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00322
SMART:SM00355 SMART:SM00490 SMART:SM00647 SMART:SM00847
Pfam:PF00097 Prosite:PS00518 GO:GO:0005524 EMBL:CP002688
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12818 IPI:IPI00548793
RefSeq:NP_196599.2 UniGene:At.49004 PRIDE:F4KGU4
EnsemblPlants:AT5G10370.1 GeneID:830901 KEGG:ath:AT5G10370
OMA:HQEPEIR ArrayExpress:F4KGU4 Uniprot:F4KGU4
Length = 1775
Score = 357 (130.7 bits), Expect = 9.0e-49, Sum P(2) = 9.0e-49
Identities = 117/421 (27%), Positives = 197/421 (46%)
Query: 571 IVKKERPGAVLVFMTGWDDINSLKDQLQAHPLLGDPSRVLLLACHGSMASSEQRLIFDKP 630
I K E+ G +L F+T ++ ++ PS + L HG ++ EQ +F
Sbjct: 518 IHKTEKEGTILAFLTSQAEVEWACERFIT------PSAIAL-PLHGKLSFEEQFRVFQN- 569
Query: 631 EDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXX 690
G RK++ ATN+AETS+TI V +VID G KE+ Y+ L +S+
Sbjct: 570 HPGRRKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGMSILKVCRVSQSSARQRA 629
Query: 691 XXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQ 750
+PG CY LY + +D+ Q PE+ R L L++ +L + +I+EF +
Sbjct: 630 GRAGRTEPGRCYRLYSKNDFDSMNLNQEPEIRRVHLGVALLRMLALGVNNIAEF--NFVD 687
Query: 751 PPEPLSVKNAIEYLQIIGALDENEN---LTVLGRNLSMLPVEPKLGKMLILGAIFNCLDP 807
P P ++ A++ L +GA+ E LT G L L +EPKLGK LILG + +
Sbjct: 688 APVPEAIAMAVQNLVQLGAVVEKNGVHELTQEGHCLVKLGLEPKLGK-LILGCFRHRMGK 746
Query: 808 VMTVVAGLSVRDPFLM----PFDKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQ 863
V+A + + FD K A+ K QF ++ D L+ Y W R +
Sbjct: 747 EGIVLAAVMANASSIFCRVGNFDDKMKADRLKVQFCNQN-GDLFTLLSVYKEWASLPRER 805
Query: 864 SGYEYCWKNFLSAQTLKAI-DSLRKQFLFLLKDAGLVDRN--TENCNKWS-HDEHLIRAV 919
++CW+N L+A++++ D++++ + + ++ LV + N N+ + HD+HL + V
Sbjct: 806 RN-KWCWENSLNAKSMRRCEDTVKELEICIERELTLVSPSYWVWNPNEGTKHDKHL-KMV 863
Query: 920 ICAGLFPGLCSVVNKEKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVF 979
I A L + + + QV L+ + + P W+VF E + + +
Sbjct: 864 ILASLAENVAMYTGYNQLGYEVALTGQQVQLHPSCSLLAFGQKP-SWVVFGELLSIVDQY 922
Query: 980 L 980
L
Sbjct: 923 L 923
Score = 249 (92.7 bits), Expect = 9.0e-49, Sum P(2) = 9.0e-49
Identities = 61/189 (32%), Positives = 94/189 (49%)
Query: 297 LPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQPRR 356
LP Y R +LK I Q++V+ GETG GK+TQL Q++ +S A+ SI+CTQPR+
Sbjct: 306 LPIYAYRRQILKKIHREQIMVLIGETGSGKSTQLVQFLADSGVAASE----SIVCTQPRK 361
Query: 357 ISAMAVSERVAAERGEKLGES-VGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXXGV 415
I+AM +++RV E E+ V + +++++ T G+
Sbjct: 362 IAAMTLADRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGI 421
Query: 416 THVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPMLHIPG 475
+ VI+DE HER +N D LL + MSAT +A+ S YF +L + G
Sbjct: 422 SCVIIDEAHERSLNTDLLLALLKKLLSRRIDLRLVIMSATADAKQLSQYFFSCGILLVNG 481
Query: 476 FTYPVRAYF 484
+PV +
Sbjct: 482 RNFPVEIVY 490
>POMBASE|SPAC20H4.09 [details] [associations]
symbol:SPAC20H4.09 "ATP-dependent RNA helicase,
spliceosomal (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IC;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0045292 "mRNA cis splicing,
via spliceosome" evidence=ISS] [GO:0071276 "cellular response to
cadmium ion" evidence=IMP] [GO:0071585 "detoxification of cadmium
ion" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAC20H4.09
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 EMBL:CU329670
GO:GO:0008380 GO:GO:0071276 GO:GO:0071585 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 RefSeq:NP_593629.1 ProteinModelPortal:Q9HE06
EnsemblFungi:SPAC20H4.09.1 GeneID:2542874 KEGG:spo:SPAC20H4.09
OMA:NYSVIIL OrthoDB:EOG4BGD47 NextBio:20803914 Uniprot:Q9HE06
Length = 647
Score = 306 (112.8 bits), Expect = 1.9e-48, Sum P(2) = 1.9e-48
Identities = 111/430 (25%), Positives = 207/430 (48%)
Query: 564 IEHVLCHIVKKERPGAVLVFMTGWDDIN----SLKDQLQAHPLLGDPSRVLLLACHGSMA 619
IE V+ +I PG +LVF++G +I ++D L H D ++ L H +
Sbjct: 224 IETVI-NINSTYPPGDILVFLSGRKEIEYCIKKIEDSL-IHAS-EDCQTLVPLPLHAGLT 280
Query: 620 SSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPS 679
EQ +F+ + RK++ +TN+AETSITI+ +V+V+D G K+ Y+ T L+
Sbjct: 281 VDEQMRVFNIYDGDFRKVIFSTNIAETSITIDGIVYVVDSGFNKQRIYNPYTRTSKLINV 340
Query: 680 WISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLG 739
ISK G+ + LY Y + ++L + L L +K L L
Sbjct: 341 PISKSSAIQRSGRAGRTMRGKVFRLYTEKAYSLMKEEFEADILNCDMSPLVLFLKGLGLK 400
Query: 740 SISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLT-VLGRNLSMLPVEPKLGKMLIL 798
+I +F ++PP + + A+E L ++G LDE+ NLT LG +S ++ + K L+
Sbjct: 401 NILQF-PFFVRPPT-VHLMAALEDLYLLGVLDESGNLTDPLGIQISNSFLDANISKALLT 458
Query: 799 GAIFNCLDPVMTVVAGLSVRDPFLMPFDK-KDLAESAKAQFSARDYSDHLALVRAYDGWK 857
F C ++++ + L+ + F P K+ A A + F A + D + + ++ +
Sbjct: 459 SNQFGCTHEILSIASILTAGEVFYNPTSSSKNDAFVAHSSFFANE-GDIITALNVFESFV 517
Query: 858 DAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFL-FLLK-DAGLVDR-NTENCNKWSHDEH 914
++ ++C KN+L+ QTL+ +R + FL K R + +C+K
Sbjct: 518 G---NKKDLQWCRKNYLNYQTLRQALDIRTHLVRFLNKFSIPTAQRLPSSDCSK------ 568
Query: 915 LIRAVICAGLFPGLC-SVVNKEKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFNEKI 973
+++ C L G +V + + + KT+ QV L S+SV + + PW++++ +
Sbjct: 569 ILK---C--LLDGFVRNVAHLQNDGSYKTIGGKQVWLDSSSV---LHEKKTPWIMYSSAV 620
Query: 974 KVNS-VFLRD 982
+ + +F+++
Sbjct: 621 ESETQIFVKN 630
Score = 284 (105.0 bits), Expect = 1.9e-48, Sum P(2) = 1.9e-48
Identities = 68/199 (34%), Positives = 102/199 (51%)
Query: 294 RRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSIICTQ 353
++ LP K R+ LL A+ +NQ+ +V G TGCGKTTQ+PQ++ E+ + G I CTQ
Sbjct: 22 KKLLPITKYRNQLLYAVEQNQITIVLGHTGCGKTTQIPQFLYEAGWASQNGI---IGCTQ 78
Query: 354 PRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXXXXXX 413
PRR+ A +VSERV+ E G GY ++ + T++ + T GI
Sbjct: 79 PRRLVAKSVSERVSLELNSPPGSLCGYSIQFDHNVSEKTKIKYMTDGILLNEIFFDPLLE 138
Query: 414 GVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGAPM--L 471
+ VI+DE+HER ++ D LL V SA+++A S +FG + +
Sbjct: 139 RYSIVILDEVHERTLSTDLLLGVLKRILEKRNDFRLVLSSASVDANKLSQFFGQDKVCTM 198
Query: 472 HIPGFTYPVRAYFLENILE 490
I G +PV FL+ E
Sbjct: 199 SIEGKLFPVETLFLQKPTE 217
>UNIPROTKB|I3LRU8 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR002464 InterPro:IPR011545
Pfam:PF00270 PROSITE:PS00690 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:FP312685
Ensembl:ENSSSCT00000027576 Uniprot:I3LRU8
Length = 439
Score = 511 (184.9 bits), Expect = 3.9e-48, P = 3.9e-48
Identities = 101/209 (48%), Positives = 134/209 (64%)
Query: 289 KMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACS 348
+M FR LPSY + L+ I +QV V+SGETGCGKTTQ+ Q+IL++ E +G+AC
Sbjct: 203 EMQHFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACR 262
Query: 349 IICTQPRRISAMAVSERVAAERGEKLGE--SVGYKVRLEG-MKGRDTRLMFCTTGIXXXX 405
I+CTQPRRISA++V+ERVAAER E G S GY++RL+ + + +++CTTGI
Sbjct: 263 IVCTQPRRISAISVAERVAAERAETCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQW 322
Query: 406 XXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYF 465
V+H+++DEIHER + D L+ V MSATLNAE FS YF
Sbjct: 323 LQSDPHLSSVSHILLDEIHERNLQSDVLMTVIKDLLSYRPDLKVVLMSATLNAEKFSEYF 382
Query: 466 GGAPMLHIPGFTYPVRAYFLENILEMTRY 494
G PM+HIPGFT+PV Y LE+I+E RY
Sbjct: 383 GNCPMIHIPGFTFPVVEYLLEDIIEKIRY 411
>DICTYBASE|DDB_G0287351 [details] [associations]
symbol:dhx37 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0005732 "small nucleolar ribonucleoprotein
complex" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0287351
GO:GO:0005524 GO:GO:0005730 GenomeReviews:CM000154_GR GO:GO:0003676
GO:GO:0042254 EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0003724 KO:K14780 GO:GO:0005732
RefSeq:XP_637255.1 STRING:Q54KG8 EnsemblProtists:DDB0235265
GeneID:8626085 KEGG:ddi:DDB_G0287351 InParanoid:Q54KG8 OMA:HERNLNT
Uniprot:Q54KG8
Length = 1461
Score = 356 (130.4 bits), Expect = 1.0e-47, Sum P(6) = 1.0e-47
Identities = 83/242 (34%), Positives = 131/242 (54%)
Query: 583 FMTGWDDINSLKDQLQAHPLLGDPSRVLLLACHGSMASSEQRLIFDKPEDGVRKIVLATN 642
F G +DI + D+ A PL +L + ++ +S+Q +F P G R +V+ATN
Sbjct: 827 FEIGKEDIITEDDEKPAGPLF-------VLPLYSTLPTSKQMRVFQTPPLGSRLVVVATN 879
Query: 643 MAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXXXVQPGECY 702
+AETS+TI ++ +V+D G+ K+ Y+ N W SK PG CY
Sbjct: 880 LAETSLTIPNIKYVVDTGRVKQRYYNKDNGISSFEVGWTSKASADQRAGRAGRTGPGHCY 939
Query: 703 HLYPRYVY-DAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPEPLSVKNAI 761
+Y V+ D F + PE+L P+ + LQ+KS+ + I+ F PP+ S+K A+
Sbjct: 940 RIYSSAVFNDHFQQFSKPEILMIPIDGMILQMKSMGIQKITGFPFPT--PPDESSLKLAL 997
Query: 762 EYLQIIGALD-ENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDP 820
L +GAL+ + ++T LG +S PV P+ KML+LG NCL ++ +V+ L+V+DP
Sbjct: 998 RTLINLGALEVKTFSITELGMKMSQFPVSPRHSKMLLLGQEHNCLPYIIAIVSILTVKDP 1057
Query: 821 FL 822
FL
Sbjct: 1058 FL 1059
Score = 234 (87.4 bits), Expect = 1.0e-47, Sum P(6) = 1.0e-47
Identities = 51/144 (35%), Positives = 82/144 (56%)
Query: 294 RRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESET-EAARGAACSII-C 351
R +LP E ++++ I +N VV++ GETG GKTTQ+PQ++ ES G II
Sbjct: 402 RDNLPIMLEEHSIVEKIKDNDVVIICGETGSGKTTQVPQFLYESGFGHRESGDFPGIIGV 461
Query: 352 TQPRRISAMAVSERVAAERGEKLGESVGYKVRLEG-MKGRDTRLMFCTTGIXXXXXXXXX 410
TQPRR++A++ ++RVA E + G+ VGY++R + + ++ F T GI
Sbjct: 462 TQPRRVAAVSTAKRVAEELNVEFGKEVGYQIRYDKKLDSSVNKIKFMTDGILMREVQTDF 521
Query: 411 XXXGVTHVIVDEIHERGMNEDFLL 434
+ +++DE HER +N D L+
Sbjct: 522 LLSQYSSILIDEAHERNLNTDILI 545
Score = 53 (23.7 bits), Expect = 1.0e-47, Sum P(6) = 1.0e-47
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 562 NLIEHVLCHIVK--KERP-GAVLVFMTGWDDINSLKDQLQ-AHPL 602
N I+ +VK K P G +LVF+TG +I L +L+ A P+
Sbjct: 629 NYIDECYKKVVKIHKNLPSGGILVFVTGKQEIEYLCSKLRRAFPI 673
Score = 52 (23.4 bits), Expect = 1.3e-47, Sum P(6) = 1.3e-47
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 452 MSATLNAELFSS----YFGGAPMLHIPGFTYPVRAYFLENILEMTRYRLNTYNQI 502
MSATL E F+ + P+++IP +PV +F + E+ Y Y ++
Sbjct: 585 MSATLRVEDFTKNKTLFSRPPPVINIPTRQFPVTIHFNKKT-ELVNYIDECYKKV 638
Score = 51 (23.0 bits), Expect = 1.0e-47, Sum P(6) = 1.0e-47
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 847 LALVRAYDGWKDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQ 888
L +V AYD ++ + + +C +NFL+ +++ I LR Q
Sbjct: 1124 LKVVGAYD-YQIRKSPKDIDHFCSQNFLNTKSMSEIHKLRHQ 1164
Score = 42 (19.8 bits), Expect = 1.0e-47, Sum P(6) = 1.0e-47
Identities = 14/58 (24%), Positives = 26/58 (44%)
Query: 145 RNKDEQEVVSRAKKDRRDFEQLSALATRMGLHSRQYA-KVVVFSKAPLPNYRSDLDEK 201
+NK E++V +++ E+L +A ++ +Y + VF K N L K
Sbjct: 307 KNKVEEKVKEEEEEEEIKKEELEEIANQVNSEIDRYNYSIEVFGKEEEENREVFLSTK 364
Score = 38 (18.4 bits), Expect = 1.0e-47, Sum P(6) = 1.0e-47
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 107 QDESSDDSDREFGSTQQQM 125
QD+S D++ E ST + +
Sbjct: 194 QDDSEDENTIELNSTNKNV 212
Score = 37 (18.1 bits), Expect = 2.2e-26, Sum P(5) = 2.2e-26
Identities = 9/42 (21%), Positives = 18/42 (42%)
Query: 245 NDEGLYEQQEQLVQNSVVRERILRQRSLQMHEKQQAWQESPE 286
ND+ E+ V+ V E + + ++ E ++ E E
Sbjct: 752 NDDQFIVNDEEEVEEEEVEEEEVEEEEVEEEEVEEEEVEEEE 793
>GENEDB_PFALCIPARUM|PF08_0042 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase
prh1, putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 305 (112.4 bits), Expect = 2.4e-47, Sum P(4) = 2.4e-47
Identities = 68/212 (32%), Positives = 116/212 (54%)
Query: 611 LLACHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDAL 670
+L + S+ + +Q++IF+ RK++L+TN+AETS+TI ++ +VID GK K +D
Sbjct: 402 ILQLYSSLPNKKQKVIFEPVPPNTRKVILSTNIAETSVTIPNIKYVIDSGKVKIKYFDVN 461
Query: 671 NNTPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLC 730
+ L + ISK PG+ Y +Y + Y+ + +PE+ R+ L +
Sbjct: 462 RGSNVLRVTQISKDSAIQRSGRAGREAPGQVYRIYTKEEYENMNPFLIPEIFRSDLTQIY 521
Query: 731 LQIKSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEP 790
L++K++ + + EF + P + L V +A + L I A+D N NLT LG+ L + P+ P
Sbjct: 522 LELKAMNINNPLEF-NFPENPRKELFVHSA-KMLFKINAIDMNNNLTDLGKKLCLFPLNP 579
Query: 791 KLGKMLILGAIFNCLDPVMTVVAGLSVRDPFL 822
+L+ FNC+D + T+VA L+ FL
Sbjct: 580 IYANILLCSIEFNCIDEIATIVALLNCDSIFL 611
Score = 173 (66.0 bits), Expect = 2.4e-47, Sum P(4) = 2.4e-47
Identities = 63/268 (23%), Positives = 119/268 (44%)
Query: 349 IICTQPRRISAMAVSERVAAE--RGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXX 406
++ + PRR++ + V+ERV+ E RG+ +G VGY +R + + TR+ F T GI
Sbjct: 72 MLISLPRRVATITVAERVSKEMKRGD-IGNYVGYTIRFKNVCSDKTRIKFVTDGILIREI 130
Query: 407 XXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFG 466
+I+DEIHER + D LL MSAT + +F+ +F
Sbjct: 131 MNDPLLKKYKFLILDEIHERSIRTDVLLGYTKILLQKRKKIKIILMSATFDINIFNQFFN 190
Query: 467 GAPMLHIPGFTYPVRAYF----LEN-ILEMTRYRL-----NT-----YNQIDDYGQEKSW 511
P++ IP + + Y+ +E+ IL + L NT + DD+ + K
Sbjct: 191 NPPIITIPHKLHKITIYYPRRNIEDYILSVVSTILQIHFGNTSYSSEFENDDDHRENKPN 250
Query: 512 KMQKQALALRKRKSSIASAVEDALEAADFRE-YSVQTQQSLSCWNPDSIGFNLIEHVLCH 570
++ + + + + + ++ V ++ + + + + + D+I N I +
Sbjct: 251 ELNELNKSNEQNELNESNEVNKEHDSYESNKTHDINEIDEQNNLQTDNISMNNINEDIKK 310
Query: 571 IVKKERPGAVLVFMTGWDDINSLKDQLQ 598
K G +LVF+ G ++I + L+
Sbjct: 311 TEDKSL-GDILVFLPGQEEIEMVNIMLK 337
Score = 124 (48.7 bits), Expect = 2.4e-47, Sum P(4) = 2.4e-47
Identities = 33/102 (32%), Positives = 53/102 (51%)
Query: 295 RSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILE----------------SE 338
R LP K + + K I +N ++++ GETGCGKTTQ+PQ I E ++
Sbjct: 2 RELPILKYKHEIKKLIKKNNLIIIKGETGCGKTTQVPQIINEIFFDKKEKKYDNIKHKND 61
Query: 339 TEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGY 380
+ R ++ + PRR++ + V+ERV+ E K G+ Y
Sbjct: 62 EKKKRKEKKKMLISLPRRVATITVAERVSKEM--KRGDIGNY 101
Score = 74 (31.1 bits), Expect = 2.4e-47, Sum P(4) = 2.4e-47
Identities = 30/170 (17%), Positives = 79/170 (46%)
Query: 826 DKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYEYCWKNFLSAQTLKAIDSL 885
DK L A+ + D DHL L+ + W++A+ + + +C L+ + L+ ++ +
Sbjct: 696 DKNKLINVARRKLIHPD-GDHLTLLHIFYLWQEADIKEKKH-FCNIYALNNEILQQVEKI 753
Query: 886 RKQFLFLLKDAGLVDRNTE-NCNKWSHDEHLIRAVICAGLFPGLCSVVNKEKSIALKTME 944
+ Q L ++K+ ++ + + +KW D+ LI +C F + + ++ + +
Sbjct: 754 KIQLLEIMKNKMKIEIPKKLHMHKW--DQILI--CLCKACFFNIAKSTSNT-NVYINLVN 808
Query: 945 DGQVLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVSDSVLLLF 994
++ ++ +S I ++ +++ ++ ++ R T + LL +
Sbjct: 809 KTKIRIHPSSTLFN-SYIKPTFIFYSDIVQTKRLYARIVTKIEADWLLKY 857
>UNIPROTKB|Q8IB47 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase prh1,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 305 (112.4 bits), Expect = 2.4e-47, Sum P(4) = 2.4e-47
Identities = 68/212 (32%), Positives = 116/212 (54%)
Query: 611 LLACHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDAL 670
+L + S+ + +Q++IF+ RK++L+TN+AETS+TI ++ +VID GK K +D
Sbjct: 402 ILQLYSSLPNKKQKVIFEPVPPNTRKVILSTNIAETSVTIPNIKYVIDSGKVKIKYFDVN 461
Query: 671 NNTPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLC 730
+ L + ISK PG+ Y +Y + Y+ + +PE+ R+ L +
Sbjct: 462 RGSNVLRVTQISKDSAIQRSGRAGREAPGQVYRIYTKEEYENMNPFLIPEIFRSDLTQIY 521
Query: 731 LQIKSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEP 790
L++K++ + + EF + P + L V +A + L I A+D N NLT LG+ L + P+ P
Sbjct: 522 LELKAMNINNPLEF-NFPENPRKELFVHSA-KMLFKINAIDMNNNLTDLGKKLCLFPLNP 579
Query: 791 KLGKMLILGAIFNCLDPVMTVVAGLSVRDPFL 822
+L+ FNC+D + T+VA L+ FL
Sbjct: 580 IYANILLCSIEFNCIDEIATIVALLNCDSIFL 611
Score = 173 (66.0 bits), Expect = 2.4e-47, Sum P(4) = 2.4e-47
Identities = 63/268 (23%), Positives = 119/268 (44%)
Query: 349 IICTQPRRISAMAVSERVAAE--RGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXX 406
++ + PRR++ + V+ERV+ E RG+ +G VGY +R + + TR+ F T GI
Sbjct: 72 MLISLPRRVATITVAERVSKEMKRGD-IGNYVGYTIRFKNVCSDKTRIKFVTDGILIREI 130
Query: 407 XXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFG 466
+I+DEIHER + D LL MSAT + +F+ +F
Sbjct: 131 MNDPLLKKYKFLILDEIHERSIRTDVLLGYTKILLQKRKKIKIILMSATFDINIFNQFFN 190
Query: 467 GAPMLHIPGFTYPVRAYF----LEN-ILEMTRYRL-----NT-----YNQIDDYGQEKSW 511
P++ IP + + Y+ +E+ IL + L NT + DD+ + K
Sbjct: 191 NPPIITIPHKLHKITIYYPRRNIEDYILSVVSTILQIHFGNTSYSSEFENDDDHRENKPN 250
Query: 512 KMQKQALALRKRKSSIASAVEDALEAADFRE-YSVQTQQSLSCWNPDSIGFNLIEHVLCH 570
++ + + + + + ++ V ++ + + + + + D+I N I +
Sbjct: 251 ELNELNKSNEQNELNESNEVNKEHDSYESNKTHDINEIDEQNNLQTDNISMNNINEDIKK 310
Query: 571 IVKKERPGAVLVFMTGWDDINSLKDQLQ 598
K G +LVF+ G ++I + L+
Sbjct: 311 TEDKSL-GDILVFLPGQEEIEMVNIMLK 337
Score = 124 (48.7 bits), Expect = 2.4e-47, Sum P(4) = 2.4e-47
Identities = 33/102 (32%), Positives = 53/102 (51%)
Query: 295 RSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILE----------------SE 338
R LP K + + K I +N ++++ GETGCGKTTQ+PQ I E ++
Sbjct: 2 RELPILKYKHEIKKLIKKNNLIIIKGETGCGKTTQVPQIINEIFFDKKEKKYDNIKHKND 61
Query: 339 TEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGY 380
+ R ++ + PRR++ + V+ERV+ E K G+ Y
Sbjct: 62 EKKKRKEKKKMLISLPRRVATITVAERVSKEM--KRGDIGNY 101
Score = 74 (31.1 bits), Expect = 2.4e-47, Sum P(4) = 2.4e-47
Identities = 30/170 (17%), Positives = 79/170 (46%)
Query: 826 DKKDLAESAKAQFSARDYSDHLALVRAYDGWKDAERHQSGYEYCWKNFLSAQTLKAIDSL 885
DK L A+ + D DHL L+ + W++A+ + + +C L+ + L+ ++ +
Sbjct: 696 DKNKLINVARRKLIHPD-GDHLTLLHIFYLWQEADIKEKKH-FCNIYALNNEILQQVEKI 753
Query: 886 RKQFLFLLKDAGLVDRNTE-NCNKWSHDEHLIRAVICAGLFPGLCSVVNKEKSIALKTME 944
+ Q L ++K+ ++ + + +KW D+ LI +C F + + ++ + +
Sbjct: 754 KIQLLEIMKNKMKIEIPKKLHMHKW--DQILI--CLCKACFFNIAKSTSNT-NVYINLVN 808
Query: 945 DGQVLLYSNSVNAGVPKIPYPWLVFNEKIKVNSVFLRDSTGVSDSVLLLF 994
++ ++ +S I ++ +++ ++ ++ R T + LL +
Sbjct: 809 KTKIRIHPSSTLFN-SYIKPTFIFYSDIVQTKRLYARIVTKIEADWLLKY 857
>UNIPROTKB|I3LRK0 [details] [associations]
symbol:I3LRK0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
GeneTree:ENSGT00550000074257 EMBL:FP102731 EMBL:CU694750
Ensembl:ENSSSCT00000027140 Uniprot:I3LRK0
Length = 524
Score = 499 (180.7 bits), Expect = 7.7e-47, P = 7.7e-47
Identities = 109/285 (38%), Positives = 174/285 (61%)
Query: 549 QSLSCWNPDSIGFNLIEHVLCHIVKKER-----PGAVLVFMTGWDDINSLKDQLQAHPLL 603
+++S + + + LIE +L IV + PGA+LVF+ G +I L +QLQ++ L
Sbjct: 8 KTMSIMDFEKVNLELIEALLEWIVDGKHSYPPDPGAILVFLPGLAEIKMLYEQLQSNSLF 67
Query: 604 GD--PSRVLLLACHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGK 661
+ +R ++ H S++S EQ+ +F KP GV KI+++TN+AETSITI+DVV+VID GK
Sbjct: 68 NNRRSNRCVVHPLHSSLSSEEQQAVFVKPPVGVTKIIISTNIAETSITIDDVVYVIDSGK 127
Query: 662 AKETSYDALNNTPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYD-AFADYQLPE 720
KE YDA L +++S+ V G C+HL+ + ++ QLPE
Sbjct: 128 MKEKRYDASKGMESLEDTFVSQANALQRKGRAGRVTSGVCFHLFTSHHFNHQLLKQQLPE 187
Query: 721 LLRTPLQSLCLQIKSLQLGS---ISEFLSRALQPPEPLSVKNAIEYLQIIGALDENENLT 777
+ R PL+ LCL+IK L++ S + SR ++PP P S++ + L+ +GAL +E LT
Sbjct: 188 IQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIEPPHPDSLRASKIRLRDLGALTPDEKLT 247
Query: 778 VLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFL 822
LG +L+ LPV+ ++GK+++ G+IF CLDP +T+ A L+ + PF+
Sbjct: 248 PLGYHLASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFV 292
>SGD|S000001561 [details] [associations]
symbol:DHR2 "Predominantly nucleolar DEAH-box ATP-dependent
RNA helicase" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0042254 "ribosome biogenesis" evidence=IDA;TAS]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001561 GO:GO:0005524 GO:GO:0005730
EMBL:BK006944 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GO:GO:0003724 GO:GO:0000462 EMBL:AF005090 EMBL:L15328 EMBL:X75560
EMBL:Z28078 PIR:S37903 RefSeq:NP_012845.1 ProteinModelPortal:P36009
SMR:P36009 DIP:DIP-6424N IntAct:P36009 MINT:MINT-677951
STRING:P36009 PaxDb:P36009 PeptideAtlas:P36009 EnsemblFungi:YKL078W
GeneID:853784 KEGG:sce:YKL078W CYGD:YKL078w KO:K14781 OMA:PGQEEID
OrthoDB:EOG4F7RTB NextBio:974906 Genevestigator:P36009
GermOnline:YKL078W Uniprot:P36009
Length = 735
Score = 324 (119.1 bits), Expect = 8.2e-47, Sum P(2) = 8.2e-47
Identities = 72/198 (36%), Positives = 108/198 (54%)
Query: 290 MLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACSI 349
+L+ R +LP Y+ + ++ I N V V+ GETG GK+TQ+PQ++LE + + SI
Sbjct: 74 LLKMRETLPVYQHKREIMSYIESNPVTVLIGETGSGKSTQIPQFVLEKLYDTKKHG--SI 131
Query: 350 ICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXXXX 409
TQPRR++A+ ++ RVA E G KLGE VGY VR + TRL + T G+
Sbjct: 132 AVTQPRRVAAINLATRVAQEHGCKLGEQVGYSVRFDNTTTTRTRLKYLTDGMLLRELMMN 191
Query: 410 XXXXGVTHVIVDEIHERGMNEDFLL-IVXXXXXXXXXXXXXXXMSATLNAELFSSYFGGA 468
+ +++DE HER + D +L + MSATL AE FS +F A
Sbjct: 192 SDLREYSVIVIDEAHERTVLTDLILGFLKSLIQGPRPDLRIIVMSATLQAEKFSEFFNNA 251
Query: 469 PMLHIPGFTYPVRAYFLE 486
P+L + G + V+ Y+L+
Sbjct: 252 PILFVEGRKFDVKQYYLK 269
Score = 252 (93.8 bits), Expect = 8.2e-47, Sum P(2) = 8.2e-47
Identities = 99/432 (22%), Positives = 189/432 (43%)
Query: 562 NLIEHVL-C--HIVKKERPGAVLVFMTGWDDINSLKDQLQA-HPLLGDPSRVLLLA---C 614
++++ V+ C I + E G +L F+ G ++I+ ++ + D + V L+
Sbjct: 274 DIVDAVIRCCIQINQGEELGDILCFLPGQEEIDKAVTIMEKIAKYVSDEAPVPLIVPYPL 333
Query: 615 HGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTP 674
+ ++ + +Q L+F + RK+V +TN+AETS+TI+ V FV+D G K +
Sbjct: 334 YAALPAVQQSLVFAPIKGFKRKVVFSTNIAETSVTISGVKFVVDSGLRKVKVWRHQLGLA 393
Query: 675 CLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIK 734
LL IS+ G+ + LY Y PE+ R+ + S L +K
Sbjct: 394 TLLTVPISQASAMQRSGRAGRESEGKSFRLYCESDYVKLPKQSEPEIARSDVTSPVLMLK 453
Query: 735 SLQLGSISEFLSRA-LQPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLG 793
+ G + + L+ + P ++ ++ L +GALD +T G+ +++LP++P L
Sbjct: 454 --RYG-VDDLLNWTWFENPGKEAIVMGLQELYELGALDTRGKITKRGQQMALLPLQPHLS 510
Query: 794 KMLILGAIFNCLDPVMTVVAGLSVRDPFLMPF-DKKDLAESAKAQF--SARDYSDHLALV 850
+LI + CL V+ +V+ LSV + L P +++D + + + Y D + L
Sbjct: 511 SVLIKASEVGCLSQVIDIVSCLSVENLLLNPSPEERDEVNERRLSLCNAGKRYGDLIMLK 570
Query: 851 RAYDGW-----KDAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDA-GLVDRNTE 904
+D + K + ++C +S + K + +R Q K + E
Sbjct: 571 ELFDIYFYELGKSQDASSERNDWCKGLCISIRGFKNVIRVRDQLRVYCKRLFSSISEEDE 630
Query: 905 NCNKWSHDEHLIRAVICAGLFPGLCSVVNKEKSIALKTMEDGQ-VLLYSNSV---NAGVP 960
K D LI ++ L + + + +T+ G+ + ++ +S+ N P
Sbjct: 631 ESKKIGEDGELISKILKCFLTGFIKNTAIGMPDRSYRTVSTGEPISIHPSSMLFMNKSCP 690
Query: 961 KIPYPWLVFNEK 972
I Y VF K
Sbjct: 691 GIMYTEYVFTTK 702
>UNIPROTKB|H7C5F5 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 EMBL:AC018452 EMBL:AC134026 HGNC:HGNC:14410
ProteinModelPortal:H7C5F5 Ensembl:ENST00000469977 Uniprot:H7C5F5
Length = 188
Score = 316 (116.3 bits), Expect = 8.3e-46, Sum P(2) = 8.3e-46
Identities = 63/121 (52%), Positives = 76/121 (62%)
Query: 615 HGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTP 674
H M + Q +F + GVRKIV+ATN+AETSITI+DVV+VID GK KET +D NN
Sbjct: 5 HSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNIS 64
Query: 675 CLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIK 734
+ W+SK VQPG CYHLY DYQLPE+LRTPL+ LCLQIK
Sbjct: 65 TMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIK 124
Query: 735 S 735
+
Sbjct: 125 N 125
Score = 204 (76.9 bits), Expect = 8.3e-46, Sum P(2) = 8.3e-46
Identities = 42/82 (51%), Positives = 56/82 (68%)
Query: 750 QPPEPLSVKNAIEYLQIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVM 809
Q PE L LQI ALD+ E LT LG +L+ LPVEP +GKM++ GA+F CLDPV+
Sbjct: 107 QLPEILRTPLEELCLQIKNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVL 166
Query: 810 TVVAGLSVRDPFLMPFDKKDLA 831
T+ A LS +DPF++P K+ +A
Sbjct: 167 TIAASLSFKDPFVIPLGKEKIA 188
>UNIPROTKB|E1C9C2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 OMA:AKLQPRT EMBL:AADN02034854
IPI:IPI00601367 Ensembl:ENSGALT00000004688 Uniprot:E1C9C2
Length = 1145
Score = 309 (113.8 bits), Expect = 1.2e-45, Sum P(3) = 1.2e-45
Identities = 76/246 (30%), Positives = 120/246 (48%)
Query: 611 LLACHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDAL 670
+L + +A +Q +F P G R V+ATN+AETS+TI + +V+DCGK K+ YD +
Sbjct: 579 VLPLYSLLAPEKQAKVFRPPPPGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRFYDKI 638
Query: 671 NNTPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLC 730
+WIS+ +PG CY LY V+ F + PE+ + P++ L
Sbjct: 639 TGVSSFRVTWISQASANQRAGRAGRTEPGHCYRLYSSAVFMDFEKFSAPEITKRPVEDLI 698
Query: 731 LQIKSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDE-------NEN-------- 775
LQ+K+L + + F P E L+ A E L +GAL E E
Sbjct: 699 LQMKALNIEKVINFPFPTPPPTEALAA--AEELLIALGALKEPPMTGRLKEQQAAKLSCP 756
Query: 776 LTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAK 835
++ LGR ++ PV P+ KML L +CL +T+V+ ++VR+ F FD+ +E
Sbjct: 757 ISPLGRVMATFPVAPRYAKMLALSRQHDCLPYTITIVSAMTVRELF-EEFDRPAASEEET 815
Query: 836 AQFSAR 841
+ +
Sbjct: 816 VKLKGK 821
Score = 260 (96.6 bits), Expect = 1.2e-45, Sum P(3) = 1.2e-45
Identities = 71/209 (33%), Positives = 105/209 (50%)
Query: 284 SPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAAR 343
SPE Q E R LP E +++AI+EN +VV+ GETG GKTTQ+PQ++ E+ ++
Sbjct: 232 SPEIQ---EARLKLPILAEEQVIMEAINENPIVVICGETGSGKTTQVPQFLYEAGYTSSN 288
Query: 344 GAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXX 403
G I T+PRR++A+++S+RVA E V Y++R EG +T++ F T G+
Sbjct: 289 GI---IGITEPRRVAAVSMSQRVAKEMNLS-HRVVSYQIRYEGNTTDETQIKFMTDGVLL 344
Query: 404 XXXXXXXXXXGVTHVIVDEIHERGMNEDFLL----IVXXXXXXXXXXXXXXXMSATLNAE 459
+I+DE HER M D L+ + MSATL E
Sbjct: 345 KEVQKDFLLSKYKVIIIDEAHERSMYTDILIGLLSRIVPLREKKGLPLKLIIMSATLRVE 404
Query: 460 LFSS---YFGGAP-MLHIPGFTYPVRAYF 484
F+ F G P +L + +PV +F
Sbjct: 405 DFTENTRLFAGTPPVLQVDARQFPVTVHF 433
Score = 53 (23.7 bits), Expect = 1.2e-45, Sum P(3) = 1.2e-45
Identities = 13/35 (37%), Positives = 22/35 (62%)
Query: 568 LCHIVKKERPGAVLVFMTGWDDINSLKDQLQ-AHP 601
+C I + G +LVF+TG +++SL +L+ A P
Sbjct: 450 VCKIHRMLPSGGILVFLTGQAEVHSLCRRLRKAFP 484
Score = 40 (19.1 bits), Expect = 7.8e-23, Sum P(3) = 7.8e-23
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 67 RRHAVVTCSGAVTRTRRLDWKAVSYPL 93
RR A V+ S V + L + VSY +
Sbjct: 297 RRVAAVSMSQRVAKEMNLSHRVVSYQI 323
>RGD|1306837 [details] [associations]
symbol:Dhx37 "DEAH (Asp-Glu-Ala-His) box polypeptide 37"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
RGD:1306837 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647
OMA:AKLQPRT OrthoDB:EOG4P2Q1J IPI:IPI00391385 RefSeq:NP_001099396.2
UniGene:Rn.24493 Ensembl:ENSRNOT00000030823 GeneID:288647
KEGG:rno:288647 UCSC:RGD:1306837 NextBio:628468 ArrayExpress:D4A1R0
Uniprot:D4A1R0
Length = 1150
Score = 317 (116.6 bits), Expect = 1.3e-45, Sum P(3) = 1.3e-45
Identities = 77/246 (31%), Positives = 119/246 (48%)
Query: 611 LLACHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDAL 670
+L + +A +Q +F P +G R V+ATN+AETS+TI + +V+DCGK K+ YD +
Sbjct: 583 VLPLYSLLAPEKQAQVFKPPPEGTRLCVIATNVAETSLTIPGIKYVVDCGKVKKRYYDRV 642
Query: 671 NNTPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLC 730
+W+S+ +PG CY LY V+ F + PE+ R P++ L
Sbjct: 643 TGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGDFEQFPPPEITRRPVEDLI 702
Query: 731 LQIKSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALD---ENENL----------- 776
LQ+K+L + + F PP ++ A E L +GAL + E +
Sbjct: 703 LQMKALNIEKVINFPFPT--PPSVEALIAAEELLIALGALQAPPKQERMKKLQMSQLSCP 760
Query: 777 -TVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAK 835
T LGR +S PV P+ KML L CL + +VA ++VR+ F D+ +E
Sbjct: 761 ITALGRTMSTFPVAPRYAKMLALSQQHGCLPYTIAIVAAMTVRELF-EELDRPAASEEEL 819
Query: 836 AQFSAR 841
A+ R
Sbjct: 820 AELKGR 825
Score = 252 (93.8 bits), Expect = 1.3e-45, Sum P(3) = 1.3e-45
Identities = 69/205 (33%), Positives = 103/205 (50%)
Query: 289 KMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAARGAACS 348
+M E R LP E A+++A++E+ +V+V GETG GKTTQ+PQ++ E A + S
Sbjct: 240 EMQEERLKLPILAEEQAIMEAVAEHPIVIVCGETGSGKTTQVPQFLYE----AGYSSEDS 295
Query: 349 II-CTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLMFCTTGIXXXXXX 407
II T+PRR++A+A+S+RVA E V Y++R EG +TR+ F T G+
Sbjct: 296 IIGVTEPRRVAAVAMSQRVAKEMNLS-HRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQ 354
Query: 408 XXXXXXGVTHVIVDEIHERGMNEDFLL----IVXXXXXXXXXXXXXXXMSATLNAELFSS 463
VI+DE HER + D LL + MSATL E F+
Sbjct: 355 KDFLLLKYKVVIIDEAHERSVYTDILLGLLSRIVALRAKRHLPLKLLIMSATLRVEDFTQ 414
Query: 464 ----YFGGAPMLHIPGFTYPVRAYF 484
+ P++ + +PV +F
Sbjct: 415 NQRLFTTPPPVIKVESRQFPVTVHF 439
Score = 52 (23.4 bits), Expect = 1.3e-45, Sum P(3) = 1.3e-45
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 568 LCHIVKKERPGAVLVFMTGWDDINSLKDQLQ-AHPL 602
+C I + G +LVF+TG ++++L +L+ A P+
Sbjct: 456 VCKIHRMLPAGGILVFLTGQAEVHALCRRLRKAFPI 491
Score = 42 (19.8 bits), Expect = 1.8e-22, Sum P(3) = 1.8e-22
Identities = 15/59 (25%), Positives = 32/59 (54%)
Query: 265 RILRQRSLQMHEKQQAWQESPEGQKMLEFRRSLPSYKERDAL-LKAIS-ENQVVVVSGE 321
R+ + ++ + Q+ ++S EG M F++S ++ A+ L I+ +N V+ +GE
Sbjct: 484 RLRKAFPIRCSQPQEMEEDSAEG--MRRFKKSRTRARKAQAMALPQINLDNYSVLPAGE 540
Score = 39 (18.8 bits), Expect = 1.7e-23, Sum P(3) = 1.7e-23
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 67 RRHAVVTCSGAVTRTRRLDWKAVSYPL 93
RR A V S V + L + VSY +
Sbjct: 303 RRVAAVAMSQRVAKEMNLSHRVVSYQI 329
>UNIPROTKB|F5H3Y4 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00217630 HGNC:HGNC:17210
EMBL:AC093719 ProteinModelPortal:F5H3Y4 SMR:F5H3Y4
Ensembl:ENST00000544745 ArrayExpress:F5H3Y4 Bgee:F5H3Y4
Uniprot:F5H3Y4
Length = 962
Score = 316 (116.3 bits), Expect = 1.9e-45, Sum P(3) = 1.9e-45
Identities = 74/226 (32%), Positives = 113/226 (50%)
Query: 611 LLACHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDAL 670
+L + +A +Q +F P +G R V+ATN+AETS+TI + +V+DCGK K+ YD +
Sbjct: 377 VLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRYYDRV 436
Query: 671 NNTPCLLPSWISKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLC 730
+W+S+ +PG CY LY V+ F + PE+ R P++ L
Sbjct: 437 TGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGDFEQFPPPEITRRPVEDLI 496
Query: 731 LQIKSLQLGSISEFLSRALQPPEPLSVKNAIEYLQIIGALDE----------NEN----- 775
LQ+K+L + + F PP ++ A E L +GAL EN
Sbjct: 497 LQMKALNVEKVINFPFPT--PPSVEALLAAEELLIALGALQPPQKAERVKQLQENRLSCP 554
Query: 776 LTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPF 821
+T LGR ++ PV P+ KML L CL +T+VA ++VR+ F
Sbjct: 555 ITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVASMTVRELF 600
Score = 249 (92.7 bits), Expect = 1.9e-45, Sum P(3) = 1.9e-45
Identities = 71/211 (33%), Positives = 106/211 (50%)
Query: 284 SPEGQKMLEFRRSLPSYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESETEAAR 343
SPE M E R LP E +++A++E+ +V+V GETG GKTTQ+PQ++ E A
Sbjct: 29 SPE---MQEERLKLPILSEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYE----AGF 81
Query: 344 GAACSII-CTQPRRISAMAVSERVAAERGEKLGESV-GYKVRLEGMKGRDTRLMFCTTGI 401
+ SII T+PRR++A+A+S+RVA E L + V Y++R EG +TR+ F T G+
Sbjct: 82 SSEDSIIGVTEPRRVAAVAMSQRVAKEMN--LSQRVVSYQIRYEGNVTEETRIKFMTDGV 139
Query: 402 XXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLL----IVXXXXXXXXXXXXXXXMSATLN 457
VI+DE HER + D L+ + MSATL
Sbjct: 140 LLKEIQKDFLLLRYKVVIIDEAHERSVYTDILIGLLSRIVTLRAKRNLPLKLLIMSATLR 199
Query: 458 AELFSS----YFGGAPMLHIPGFTYPVRAYF 484
E F+ + P++ + +PV +F
Sbjct: 200 VEDFTQNPRLFAKPPPVIKVESRQFPVTVHF 230
Score = 51 (23.0 bits), Expect = 1.9e-45, Sum P(3) = 1.9e-45
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 568 LCHIVKKERPGAVLVFMTGWDDINSLKDQLQ-AHPLLGDPSR 608
+C I + G +LVF+TG ++++L +L+ A P PSR
Sbjct: 247 VCKIHRMLPAGGILVFLTGQAEVHALCRRLRKAFP----PSR 284
Score = 39 (18.8 bits), Expect = 1.2e-23, Sum P(3) = 1.2e-23
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 67 RRHAVVTCSGAVTRTRRLDWKAVSYPL 93
RR A V S V + L + VSY +
Sbjct: 94 RRVAAVAMSQRVAKEMNLSQRVVSYQI 120
Score = 37 (18.1 bits), Expect = 3.6e-16, Sum P(3) = 3.6e-16
Identities = 9/30 (30%), Positives = 18/30 (60%)
Query: 831 AESAKAQFSARDYSDHLALVRAYDGWKDAE 860
A+ A+A+ + DH +++ A +G +D E
Sbjct: 311 AKKARAEVLPQINLDHYSVLPAGEGDEDRE 340
>WB|WBGene00020263 [details] [associations]
symbol:T05E8.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0007413
"axonal fasciculation" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0006898 GO:GO:0040010
GO:GO:0040011 GO:GO:0003676 GO:GO:0040035 GO:GO:0007413
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO080463 PIR:T29623
RefSeq:NP_491604.3 ProteinModelPortal:O01598 SMR:O01598
STRING:O01598 PaxDb:O01598 EnsemblMetazoa:T05E8.3 GeneID:172199
KEGG:cel:CELE_T05E8.3 UCSC:T05E8.3 CTD:172199 WormBase:T05E8.3
InParanoid:O01598 OMA:KEGCIME NextBio:874451 Uniprot:O01598
Length = 856
Score = 286 (105.7 bits), Expect = 2.0e-45, Sum P(3) = 2.0e-45
Identities = 83/298 (27%), Positives = 146/298 (48%)
Query: 567 VLC--HIVKKERPGA-VLVFMTGWDDINSLKDQL-QAHPLLGDPSRVLL-LACHGSMASS 621
V+C ++ E G +LVF+TG ++I ++ QL + + L + VL+ + + ++
Sbjct: 367 VICVKYVHLTEPKGRDILVFLTGSEEIEAVASQLAELNGSLPASADVLMPVPLYAALRPE 426
Query: 622 EQRLIFDKPEDGVRKIVLATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWI 681
+Q+ F K G RK++++TN+AETS+TI + VID GK K ++A N L +
Sbjct: 427 KQKEAFRKTPQGARKVIISTNIAETSVTIPGIRVVIDSGKVKTKRFEAFNRIDVLKVHNV 486
Query: 682 SKXXXXXXXXXXXXVQPGECYHLYPRYVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSI 741
SK PG+CY LY R + F +PE+LR L + L++ ++LG
Sbjct: 487 SKAQAKQRAGRAGRDAPGKCYRLYSREDFHKFEAENMPEILRCNLSATFLEL--MKLGMK 544
Query: 742 SEFLSRALQPPEPLSVKNAIEYLQIIGAL-----DENE-NLTVLGRNLSMLPVEPKLGKM 795
+ + + PPE ++ A+ L +GA+ D ++ LT +G M P+ P ++
Sbjct: 545 NPHRLKLIDPPETDNINAALLELTSLGAIRPVNSDRSKFALTEMGDAFCMYPLPPDHARI 604
Query: 796 LILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAE--SAKAQFSARDYSDHLALVR 851
L C+ + +VA + F D K A+ + +F R+ DH+ L++
Sbjct: 605 LFQAQKEGCIMEAIKIVAAMQTDALFSGAGDSKSDADVDRIRRRFETRE-GDHITLLK 661
Score = 269 (99.8 bits), Expect = 2.0e-45, Sum P(3) = 2.0e-45
Identities = 72/219 (32%), Positives = 106/219 (48%)
Query: 271 SLQMHEKQQAWQESPEGQKMLE-FRR-SLPSYKERDALLKAISENQVVVVSGETGCGKTT 328
S + H Q Q P + E F R LP L+ ++ + ++V GETG GK+T
Sbjct: 135 STRKHSSSQ--QSPPHFEANYEKFSRPQLPIDAVEQQLMYELASQETLIVIGETGSGKST 192
Query: 329 QLPQYILESETEAARGAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMK 388
Q+PQ + + A G SI TQPRR++A++++ RVA E G +G VGY VR E
Sbjct: 193 QVPQLCVRAGI-ANSG---SIAVTQPRRVAAISLASRVATEMGTNIGGIVGYHVRFENAT 248
Query: 389 GRDTRLMFCTTGIXXXXXXXXXXXXGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXX 448
T++ + T GI + VI+DE HER ++ D L+ +
Sbjct: 249 CHKTKIEYMTDGIVLRKALVSPLLDKYSCVIIDEAHERSLHSDVLMCILRQCQDQRRETN 308
Query: 449 X----XXMSATLNAELFSSYFGGAPMLHIPGFTYPVRAY 483
MSATL AE F SYF A ++ + G T+P+ +
Sbjct: 309 NPLRLIIMSATLQAEKFQSYFNNAKVVLVAGRTFPIEVF 347
Score = 60 (26.2 bits), Expect = 2.0e-45, Sum P(3) = 2.0e-45
Identities = 26/123 (21%), Positives = 52/123 (42%)
Query: 858 DAERHQSGYEYCWKNFLSAQTLKAIDSLRKQFLFLLKDAGLVDRNT-ENCNKWSHDEHLI 916
+ E +Q+ ++C N ++ Q LK + +Q LK + + T C D +
Sbjct: 691 EREYNQTIRKFCNDNMINEQHLKTASMIEEQ----LKQIAIEQKVTFSTCGA---DFMKM 743
Query: 917 RAVICAGLFPGLCSVVNKEKSIALKTMEDGQVLLYSNSVNAGVPKIPYPWLVFNEKIKVN 976
R + G+F C +E L + ++ +S + + ++VF+E +K N
Sbjct: 744 RKALALGMFLNSCEYDRQEDRYRLMINPAITLKIHPSSC---LSRSKPAYIVFSELMKTN 800
Query: 977 SVF 979
+F
Sbjct: 801 DLF 803
WARNING: HSPs involving 65 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.393 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1009 940 0.00093 122 3 11 22 0.38 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 315
No. of states in DFA: 630 (67 KB)
Total size of DFA: 445 KB (2212 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 81.22u 0.13s 81.35t Elapsed: 00:00:04
Total cpu time: 81.32u 0.13s 81.45t Elapsed: 00:00:05
Start: Tue May 21 00:53:59 2013 End: Tue May 21 00:54:04 2013
WARNINGS ISSUED: 2