Query 001820
Match_columns 1009
No_of_seqs 567 out of 2847
Neff 5.4
Searched_HMMs 29240
Date Tue Mar 26 16:17:43 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001820.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1117-1120//hhsearch_pdb/001820hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3u06_A Protein claret segregat 1.0 1 1 743.5 37.3 349 374-730 40-393 (412)
2 4etp_A Kinesin-like protein KA 1.0 1 1 742.7 38.4 347 371-724 37-402 (403)
3 3cob_A Kinesin heavy chain-lik 1.0 1 1 736.4 27.8 357 389-751 1-358 (369)
4 2rep_A Kinesin-like protein KI 1.0 1 1 723.8 30.9 340 380-719 9-376 (376)
5 2owm_A Nckin3-434, related to 1.0 1 1 707.9 27.5 350 387-743 32-437 (443)
6 2y65_A Kinesin, kinesin heavy 1.0 1 1 705.9 25.9 343 390-744 8-360 (365)
7 3bfn_A Kinesin-like protein KI 1.0 1 1 705.7 26.5 338 385-730 13-357 (388)
8 3t0q_A AGR253WP; kinesin, alph 1.0 1 1 705.6 32.6 328 389-723 1-348 (349)
9 3b6u_A Kinesin-like protein KI 1.0 1 1 704.6 25.3 344 385-732 13-365 (372)
10 3lre_A Kinesin-like protein KI 1.0 1 1 701.6 27.1 329 384-719 1-355 (355)
No 1
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=1.00 E-value=1 Score=743.49 Aligned_cols=349 Identities=40% Similarity=0.637 Sum_probs=313.0
Q ss_pred HHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCE-EEECCCEEEEECCCCCCC---CCEEEEECEEECCCCC
Q ss_conf 247899875553331116998699999199999988887536-741599399947999999---8424880214099988
Q 001820 374 YHRVLEENRKLYNQVQDLKGSIRVYCRVRPFLSGQSNYLSTV-DHIEEGNITINTPSKHGK---GWKSFSFNKVYGPSAT 449 (1009)
Q Consensus 374 ~~~~~~e~r~l~n~~qelkG~IrV~vRVRP~~~~E~~~~~~v-~~~~~~~i~i~~p~~~gk---~~k~F~FD~VF~~~at 449 (1009)
+++...+||+|||++||++|+|||||||||+.+.|.....++ ...++.++.+..+....+ +.+.|.||+||+++++
T Consensus 40 l~~~~~~rr~l~n~~~~l~gnIrV~vRvRP~~~~E~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~F~FD~VF~~~~~ 119 (412)
T 3u06_A 40 LFQSNMERKELHNTVMDLRDNIRVFCRIRPPLESEENRMCCTWTYHDESTVELQSIDAQAKSKMGQQIFSFDQVFHPLSS 119 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEEEEECCCCGGGTTSCBCEEEEEETTEEEEECCC-------CCCEEECSEEECTTCC
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHCCCCCEEEEECCCCEEEEECCCCCCCCCCCCEEEEECEECCCCCC
T ss_conf 99999999998878887179979999848998100267612899369987998057854456668637760868189997
Q ss_pred HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH-CCCEEEEEEEEEEE
Q ss_conf 67699606999999746874018731256989861425999987332222467999999999871-26506999999999
Q 001820 450 QAEVFSDMQPLIRSVLDGYNVCIFAYGQTGSGKTYTMTGPRELTEKSQGVNYRALSDLFLIAEQR-KDIFRYDVAVQMLE 528 (1009)
Q Consensus 450 QeeVF~~v~pLV~svldGyN~tIfAYGqTGSGKTyTM~G~~~~~~~~~GIipRal~dLF~~~~~~-~~~~~~~V~vS~lE 528 (1009)
|++||+.+.|+|+++++|||+||||||||||||||||+|. .+.+|||||++++||..+... ...+.|.|.+||+|
T Consensus 120 Q~~Vf~~v~plv~~~l~G~n~tifAYGqTGSGKTyTM~G~----~~~~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~E 195 (412)
T 3u06_A 120 QSDIFEMVSPLIQSALDGYNICIFAYGQTGSGKTYTMDGV----PESVGVIPRTVDLLFDSIRGYRNLGWEYEIKATFLE 195 (412)
T ss_dssp HHHHHTTTHHHHHHHHTTCCEEEEEESSTTSSHHHHHTEE----TTEECHHHHHHHHHHHHHHHHGGGTEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEECCC----CCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEE
T ss_conf 8899999999999997797447997458999971673677----887866789999999865342036834887778999
Q ss_pred EECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEE
Q ss_conf 95461332346778886430104799973479992998079889999987110146533445657888973289999965
Q 001820 529 IYNEQVRDLLVTDGSNRRLEIRNSSQTGLNVPDASLIPVSSTADVINLMNLGQKNRAVGATALNDRSSRSHSCLTVHVQG 608 (1009)
Q Consensus 529 IYnE~V~DLL~~~~~~~~L~Ire~~~~g~~V~gltev~V~S~eev~~lL~~G~~nR~~~sT~~N~~SSRSH~IftI~V~~ 608 (1009)
||||+|+|||.+......+.+.+++.++++|.|++++.|.+.+|++.+|..|.++|++++|.||..|||||+||+|+|.+
T Consensus 196 IYnE~i~DLL~~~~~~~~i~~~~~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~ 275 (412)
T 3u06_A 196 IYNEVLYDLLSNEQKDMEIRMAKNNKNDIYVSNITEETVLDPNHLRHLMHTAKMNRATASTAGNERSSRSHAVTKLELIG 275 (412)
T ss_dssp EETTEEEETTCCSCCCCCEEECSSCTTSEEETTCCCEECCSHHHHHHHHHHHHHHCC-----CHHHHTTCEEEEEEEEEE
T ss_pred EECCEEEECCCCCCCCCEEEEEECCCCCEEECCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEE
T ss_conf 96774578678878886355303589988973607999499999999999997435423467988776732999999999
Q ss_pred EECCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCC
Q ss_conf 55599946899889885268843457754134499998987979999999999721899977888654686442049994
Q 001820 609 KDLTSGTMYRGCMHLVDLAGSERVNKSEVTGDRLKEAQHINRSLSALGDVIASLAQKNPHVPYRNSKLTQLLQDSLGGQA 688 (1009)
Q Consensus 609 ~~~~~~~~~~s~L~LVDLAGSER~~ks~~~G~rlkEa~~INkSLsaLg~VI~ALa~k~~hIPYRdSKLT~LLqdsLGGns 688 (1009)
.+...+....|+|+|||||||||.. .|.|++|+.+||+||++||+||.||++++.||||||||||+||||+|||||
T Consensus 276 ~~~~~~~~~~~kL~lVDLAGSEr~~----~~~rl~E~~~INkSL~aLg~vI~aL~~~~~hiPyRdSkLT~LLqdsLgGns 351 (412)
T 3u06_A 276 RHAEKQEISVGSINLVDLAGSESPK----TSTRMTETKNINRSLSELTNVILALLQKQDHIPYRNSKLTHLLMPSLGGNS 351 (412)
T ss_dssp EETTTTEEEEEEEEEEECCCCCC--------------CTTTHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHHGGGTSTTC
T ss_pred EECCCCCEEEEEEEEEECCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCC
T ss_conf 7078897888999999899777677----663047688775889999999999863588887324378898898618996
Q ss_pred EEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCH
Q ss_conf 045798329998867987999999998612304841124793
Q 001820 689 KTLMFVHISPEPDAVGETISTLKFAERVATVELGAARVNKDS 730 (1009)
Q Consensus 689 kT~mI~~ISP~~~~~~ETLsTLrFA~Rvk~V~~~~~~vn~~~ 730 (1009)
+|+||+||||+..+++||++||+||+|++.|++++++.|...
T Consensus 352 kt~mI~~vsP~~~~~~ETl~TLrfA~rv~~i~~~~~~~n~~~ 393 (412)
T 3u06_A 352 KTLMFINVSPFQDCFQESVKSLRFAASVNSCKMTKAKRNRYL 393 (412)
T ss_dssp EEEEEEEECCBGGGHHHHHHHHHHHHHHHHHCC---------
T ss_pred EEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 699999948973348999999999999743246666223357
No 2
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=1.00 E-value=1 Score=742.68 Aligned_cols=347 Identities=40% Similarity=0.659 Sum_probs=304.7
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCC-CCCCCCCEE--EECC--C--EEEEECCCCCCCCCEEEEECEE
Q ss_conf 8222478998755533311169986999991999999-888875367--4159--9--3999479999998424880214
Q 001820 371 ASGYHRVLEENRKLYNQVQDLKGSIRVYCRVRPFLSG-QSNYLSTVD--HIEE--G--NITINTPSKHGKGWKSFSFNKV 443 (1009)
Q Consensus 371 ~~~~~~~~~e~r~l~n~~qelkG~IrV~vRVRP~~~~-E~~~~~~v~--~~~~--~--~i~i~~p~~~gk~~k~F~FD~V 443 (1009)
...+.+...+||+|||++||+||||||||||||+.+. |......+. ..++ + .+.+..+. .....+.|.||+|
T Consensus 37 ~~~~~~~~~~rr~l~n~~~elkgnIrV~vRvRP~~~~~e~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~F~FD~V 115 (403)
T 4etp_A 37 NEILIKEETVRRTLHNELQELRGNIRVYLRIRPALKNLENSDTSLINVNEFDDNSGVQSMEVTKIQ-NTAQVHEFKFDKI 115 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCSEEEEEEECCCCTTTSCSCCTTEEECCCBTTTTBEEEEEEECS-SSCEEEEEEESEE
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCC-CCCCCEEEECCEE
T ss_conf 999999999999999899971898699999088997634467870687403677884379982678-8767568776889
Q ss_pred ECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH-CCCEEEEE
Q ss_conf 09998867699606999999746874018731256989861425999987332222467999999999871-26506999
Q 001820 444 YGPSATQAEVFSDMQPLIRSVLDGYNVCIFAYGQTGSGKTYTMTGPRELTEKSQGVNYRALSDLFLIAEQR-KDIFRYDV 522 (1009)
Q Consensus 444 F~~~atQeeVF~~v~pLV~svldGyN~tIfAYGqTGSGKTyTM~G~~~~~~~~~GIipRal~dLF~~~~~~-~~~~~~~V 522 (1009)
|+++++|++||+++.|+|+++++|||+||||||||||||||||+|+ .+|||||++++||..++.. ...+.|.|
T Consensus 116 F~~~~~Q~~Vf~~v~~lv~~~l~G~N~tifAYGqTGSGKTyTM~g~------~~Giipr~~~~lF~~i~~~~~~~~~~~v 189 (403)
T 4etp_A 116 FDQQDTNVDVFKEVGQLVQSSLDGYNVAIFAYGQTGSGKTFTMLNP------GDGIIPSTISHIFNWINKLKTKGWDYKV 189 (403)
T ss_dssp ECTTCCHHHHHHHHHHHHHHHHTTCCEEEEEESCTTSSHHHHHHCT------TTSHHHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred ECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEECCC------CCCCCHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 7998865899999999999985896169999777999983674799------9863214799999888764036834899
Q ss_pred EEEEEEEECCEEEECCCCCC-------CCCCCCCCCCCC-CCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 99999995461332346778-------886430104799-9734799929980798899999871101465334456578
Q 001820 523 AVQMLEIYNEQVRDLLVTDG-------SNRRLEIRNSSQ-TGLNVPDASLIPVSSTADVINLMNLGQKNRAVGATALNDR 594 (1009)
Q Consensus 523 ~vS~lEIYnE~V~DLL~~~~-------~~~~L~Ire~~~-~g~~V~gltev~V~S~eev~~lL~~G~~nR~~~sT~~N~~ 594 (1009)
.+||+|||||+|+|||.+.. ....+.+++++. ++++|.|++++.|.++++++.+|..|.++|++++|.||..
T Consensus 190 ~vS~~EIYnE~i~DLL~~~~~~~~~~~~~~~~~i~~~~~~~~~~v~~l~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~ 269 (403)
T 4etp_A 190 NAEFIEIYNENIVDLLRSDNNNKEDTSIGLKHEIRHDQETKTTTITNVTSVKLESEEMVEIILKKANKLRSTASTASNEH 269 (403)
T ss_dssp EEEEEEEETTEEEETTCC--------CCSCCCCEEEETTTTEEEETTCCCEECCCHHHHHHHHHHHC--C----CHHHHH
T ss_pred EEEEEEEECCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEECCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 99999983661468567766554445667650368707999788368179991999999999999997344344547765
Q ss_pred CCCCCEEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---CCCC
Q ss_conf 8897328999996555599946899889885268843457754134499998987979999999999721899---9778
Q 001820 595 SSRSHSCLTVHVQGKDLTSGTMYRGCMHLVDLAGSERVNKSEVTGDRLKEAQHINRSLSALGDVIASLAQKNP---HVPY 671 (1009)
Q Consensus 595 SSRSH~IftI~V~~~~~~~~~~~~s~L~LVDLAGSER~~ks~~~G~rlkEa~~INkSLsaLg~VI~ALa~k~~---hIPY 671 (1009)
|||||+||+|+|.+.+...+....|+|+|||||||||+.++++.|+|++|+.+||+||++||+||.||+++.. ||||
T Consensus 270 SSRSH~if~i~v~~~~~~~~~~~~~kL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~~~hiPy 349 (403)
T 4etp_A 270 SSRSHSIFIIHLSGSNAKTGAHSYGTLNLVDLAGSERINVSQVVGDRLRETQNINKSLSALGDVIHALGQPDSTKRHIPF 349 (403)
T ss_dssp HHTSEEEEEEEEEEEETTTCCEEEEEEEEEECCCCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHTSSCTTTSCCCG
T ss_pred CCCCCCEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 67764279999998606889766899999979998644456770488999999878899999999998614689986774
Q ss_pred CCCHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 88654686442049994045798329998867987999999998612304841
Q 001820 672 RNSKLTQLLQDSLGGQAKTLMFVHISPEPDAVGETISTLKFAERVATVELGAA 724 (1009)
Q Consensus 672 RdSKLT~LLqdsLGGnskT~mI~~ISP~~~~~~ETLsTLrFA~Rvk~V~~~~~ 724 (1009)
||||||+||||+|||||+|+||+||||+..+++||++||+||+|++.|++++.
T Consensus 350 RdSkLT~LLqdsLgGnskt~mi~~vsP~~~~~~ETl~TL~fA~rv~~~~~~~r 402 (403)
T 4etp_A 350 RNSKLTYLLQYSLTGDSKTLMFVNISPSSSHINETLNSLRFASKVNSTRLVSR 402 (403)
T ss_dssp GGSHHHHHTGGGTSTTCEEEEEEEECCSGGGHHHHHHHHHHHHHHCCC-----
T ss_pred CCCHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 56668898798628996499999937963348999999999999710526789
No 3
>3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A*
Probab=1.00 E-value=1 Score=736.37 Aligned_cols=357 Identities=40% Similarity=0.656 Sum_probs=319.7
Q ss_pred HCCCCCEEEEEEECCCCCCCCCCCCCEEEECCCEEEEECCCCCCCCCEEEEECEEECCCCCHHHHHHHHHHHHHHHHCCC
Q ss_conf 11699869999919999998888753674159939994799999984248802140999886769960699999974687
Q 001820 389 QDLKGSIRVYCRVRPFLSGQSNYLSTVDHIEEGNITINTPSKHGKGWKSFSFNKVYGPSATQAEVFSDMQPLIRSVLDGY 468 (1009)
Q Consensus 389 qelkG~IrV~vRVRP~~~~E~~~~~~v~~~~~~~i~i~~p~~~gk~~k~F~FD~VF~~~atQeeVF~~v~pLV~svldGy 468 (1009)
||++|+|||||||||+.+.|.....++.....+.+++..+...+ ..+.|.||+||+++++|++||+.+.|+|+++++||
T Consensus 1 ee~~~~i~V~vRvRP~~~~E~~~~~~~~~~~~~~~~v~~~~~~~-~~~~f~FD~Vf~~~~~Q~~Vy~~~~~lv~~~l~G~ 79 (369)
T 3cob_A 1 EDMKGKIRVYCRLRPLCEKEIIAKERNAIRSVDEFTVEHLWKDD-KAKQHMYDRVFDGNATQDDVFEDTKYLVQSAVDGY 79 (369)
T ss_dssp ---CCBCEEEEEECCCCHHHHHTTCCBCEEECSSSEEEEECTTS-CEEEEECSEEECTTCCHHHHHHTTTHHHHHHHTTC
T ss_pred CCCCCCEEEEEECCCCCHHHCCCCCCEEEECCCCEEEEECCCCC-CCEEEECCEEECCCCCCCEEHHHHHHHHHHHHCCC
T ss_conf 98899849999879998345467983799769967999337899-82688659898999973140221313257664697
Q ss_pred CEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEECCEEEECCCCCCC-CCCC
Q ss_conf 401873125698986142599998733222246799999999987126506999999999954613323467788-8643
Q 001820 469 NVCIFAYGQTGSGKTYTMTGPRELTEKSQGVNYRALSDLFLIAEQRKDIFRYDVAVQMLEIYNEQVRDLLVTDGS-NRRL 547 (1009)
Q Consensus 469 N~tIfAYGqTGSGKTyTM~G~~~~~~~~~GIipRal~dLF~~~~~~~~~~~~~V~vS~lEIYnE~V~DLL~~~~~-~~~L 547 (1009)
|+||||||||||||||||+|++ .++||+||++++||..++.....+.|.|.+||+|||||+|+|||.+... ...+
T Consensus 80 n~tifAYGqTGSGKTyTM~G~~----~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~l 155 (369)
T 3cob_A 80 NVCIFAYGQTGSGKTFTIYGAD----SNPGLTPRAMSELFRIMKKDSNKFSFSLKAYMVELYQDTLVDLLLPKQAKRLKL 155 (369)
T ss_dssp EEEEEEEECTTSSHHHHHTBCS----SSBCHHHHHHHHHHHHHHHTTTTEEEEEEEEEEEECSSCEEESSCCSSSCCCCC
T ss_pred CEEEEEECCCCCCCEEEECCCC----CCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCEEEECCCCCCCCCCCE
T ss_conf 1599987899998837511799----888625899999999987413575267789998770763234578755677642
Q ss_pred CCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEEEEEEEEECC
Q ss_conf 01047999734799929980798899999871101465334456578889732899999655559994689988988526
Q 001820 548 EIRNSSQTGLNVPDASLIPVSSTADVINLMNLGQKNRAVGATALNDRSSRSHSCLTVHVQGKDLTSGTMYRGCMHLVDLA 627 (1009)
Q Consensus 548 ~Ire~~~~g~~V~gltev~V~S~eev~~lL~~G~~nR~~~sT~~N~~SSRSH~IftI~V~~~~~~~~~~~~s~L~LVDLA 627 (1009)
.|++++.++++|.|++++.|.+++|++.+|..|.++|++++|.||..|||||+||+|+|++.+...+....|+|+|||||
T Consensus 156 ~i~e~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~skL~lVDLA 235 (369)
T 3cob_A 156 DIKKDSKGMVSVENVTVVSISTYEELKTIIQRGSEQRHTTGTLMNEQSSRSHLIVSVIIESTNLQTQAIARGKLSFVDLA 235 (369)
T ss_dssp EEEECTTSCEEEETCCCEEECSHHHHHHHHHHHHHHTCCCSCCTTCHHHHSEEEEEEEEEEEETTTCCEEEEEEEEEECC
T ss_pred EEEECCCCCEECCCCEEEEECCHHHHHHHHHHHHHCCEEECCCCCCCCCCCEEEEEEEEEEECCCCCCEEEEEEEEEECC
T ss_conf 78997999888059879980899999999998752552303447787776338999999985278772788899999688
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHH
Q ss_conf 88434577541344999989879799999999997218999778886546864420499940457983299988679879
Q 001820 628 GSERVNKSEVTGDRLKEAQHINRSLSALGDVIASLAQKNPHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEPDAVGETI 707 (1009)
Q Consensus 628 GSER~~ks~~~G~rlkEa~~INkSLsaLg~VI~ALa~k~~hIPYRdSKLT~LLqdsLGGnskT~mI~~ISP~~~~~~ETL 707 (1009)
||||+.++++.|+|++|+.+||+||++||+||.||++++.||||||||||+||||+|||||+|+|||||||+..+++||+
T Consensus 236 GSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ETl 315 (369)
T 3cob_A 236 GSERVKKSGSAGNQLKEAQSINKSLSALGDVISALSSGNQHIPYRNHKLTMLMSDSLGGNAKTLMFVNISPAESNLDETH 315 (369)
T ss_dssp CSSCCCCCSSCSHHHHHHHHHTHHHHHHHHHHHHHHTTCSCCCGGGCHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHH
T ss_conf 78754434763023477878778899999999998648996787477778878876289852799999477200289999
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999998612304841124793799999999999999997551
Q 001820 708 STLKFAERVATVELGAARVNKDSSDVKELKEQIASLKAALARKE 751 (1009)
Q Consensus 708 sTLrFA~Rvk~V~~~~~~vn~~~~~i~~LkeeI~~Lk~~L~~~~ 751 (1009)
+||+||+|++.|++. +.+|.++.++.+|+++++.|+..+....
T Consensus 316 ~TLrfA~rak~i~~~-~~~n~~~~ei~~L~~~l~~~~~~~~~~~ 358 (369)
T 3cob_A 316 NSLTYASRVRSIVND-PSKNVSSKEVARLKKLVSYWKEQAGRKG 358 (369)
T ss_dssp HHHHHHHHHHTCBCC-CCCCEECHHHHHHHHHTTCC--------
T ss_pred HHHHHHHHHHHCCCC-CCCCCCHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 999999998654567-7415788999999999999997647999
No 4
>2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens}
Probab=1.00 E-value=1 Score=723.83 Aligned_cols=340 Identities=44% Similarity=0.680 Sum_probs=303.8
Q ss_pred HHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCC-CEEE--------ECCCEEEEECCCCC---------CCCCEEEEEC
Q ss_conf 8755533311169986999991999999888875-3674--------15993999479999---------9984248802
Q 001820 380 ENRKLYNQVQDLKGSIRVYCRVRPFLSGQSNYLS-TVDH--------IEEGNITINTPSKH---------GKGWKSFSFN 441 (1009)
Q Consensus 380 e~r~l~n~~qelkG~IrV~vRVRP~~~~E~~~~~-~v~~--------~~~~~i~i~~p~~~---------gk~~k~F~FD 441 (1009)
..-+|||++|+++|+|||||||||+++.|..... .+.. .++.++.+..|... ....+.|.||
T Consensus 9 ~~~~~hn~~~~~~~~irV~vRvRP~~~~E~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~F~FD 88 (376)
T 2rep_A 9 HHSSGLVPRGSLKGNIRVFCRVRPVLPGEPTPPPGLLLFPSGPGGPSDPPTRLSLSRSDERRGTLSGAPAPPPRHDFSFD 88 (376)
T ss_dssp --------------CEEEEEEECCCCTTSCCCCGGGSBCCC------CCCCEEECCC-----------------CEEECS
T ss_pred CCCCCCCHHHCCCCCEEEEEECCCCCHHHCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEC
T ss_conf 33212321122689839999919789355056985499816766656788579994477654322566677874566524
Q ss_pred EEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHC-CCEEE
Q ss_conf 14099988676996069999997468740187312569898614259999873322224679999999998712-65069
Q 001820 442 KVYGPSATQAEVFSDMQPLIRSVLDGYNVCIFAYGQTGSGKTYTMTGPRELTEKSQGVNYRALSDLFLIAEQRK-DIFRY 520 (1009)
Q Consensus 442 ~VF~~~atQeeVF~~v~pLV~svldGyN~tIfAYGqTGSGKTyTM~G~~~~~~~~~GIipRal~dLF~~~~~~~-~~~~~ 520 (1009)
+||+++++|++||+++.|+|+++++|||+||||||||||||||||+|+.......+|||||++++||..++... ..+.|
T Consensus 89 ~Vf~~~~~Q~~Vy~~v~~lv~~~l~G~N~tifAYGqTGSGKTyTM~G~~~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~ 168 (376)
T 2rep_A 89 RVFPPGSGQDEVFEEIAMLVQSALDGYPVCIFAYGQTGSGKTFTMEGGPGGDPQLEGLIPRALRHLFSVAQELSGQGWTY 168 (376)
T ss_dssp EEECTTCCHHHHHHHHHHHHHGGGGTCCEEEEEECSTTSSHHHHHTBCSSCCGGGBCHHHHHHHHHHHHHHHGGGGTEEE
T ss_pred EECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEE
T ss_conf 78488655002345477788874389754999767899987068666888886658807999999999999744477289
Q ss_pred EEEEEEEEEECCEEEECCCCCC---CCCCCCCCCC--CCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 9999999995461332346778---8864301047--9997347999299807988999998711014653344565788
Q 001820 521 DVAVQMLEIYNEQVRDLLVTDG---SNRRLEIRNS--SQTGLNVPDASLIPVSSTADVINLMNLGQKNRAVGATALNDRS 595 (1009)
Q Consensus 521 ~V~vS~lEIYnE~V~DLL~~~~---~~~~L~Ire~--~~~g~~V~gltev~V~S~eev~~lL~~G~~nR~~~sT~~N~~S 595 (1009)
.|.+||+|||||+|+|||.+.. ....+.++++ ..++++|.|++++.|.+++|++.+|..|.++|++++|.||.+|
T Consensus 169 ~v~vS~~EIYnE~i~DLL~~~~~~~~~~~l~ir~~~~~~~~~~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~S 248 (376)
T 2rep_A 169 SFVASYVEIYNETVRDLLATGTRKGQGGECEIRRAGPGSEELTVTNARYVPVSCEKEVDALLHLARQNRAVARTAQNERS 248 (376)
T ss_dssp EEEEEEEEEETTEEEETTCCC--------CCEEEC---CCCEEETTCCCEEECSHHHHHHHHHHHHHHHHHCC-----CG
T ss_pred EEEEEEEEEECCEEEECCCCCCCCCCCCCCEEEECCCCCCCEEECCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 99999999988886672444222356777237752378898797796799947899999999999743666224478877
Q ss_pred CCCCEEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 89732899999655559994689988988526884345775413----44999989879799999999997218999778
Q 001820 596 SRSHSCLTVHVQGKDLTSGTMYRGCMHLVDLAGSERVNKSEVTG----DRLKEAQHINRSLSALGDVIASLAQKNPHVPY 671 (1009)
Q Consensus 596 SRSH~IftI~V~~~~~~~~~~~~s~L~LVDLAGSER~~ks~~~G----~rlkEa~~INkSLsaLg~VI~ALa~k~~hIPY 671 (1009)
||||+||+|+|.+.+...+....|+|+|||||||||+.+++++| +|++|+.+||+||++||+||.||++++.||||
T Consensus 249 SRSH~Ifti~v~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~~~~~rlkE~~~INkSL~aLg~vI~aL~~~~~hVPY 328 (376)
T 2rep_A 249 SRSHSVFQLQISGEHSSRGLQCGAPLSLVDLAGSERLDPGLALGPGERERLRETQAINSSLSTLGLVIMALSNKESHVPY 328 (376)
T ss_dssp GGSEEEEEEEEEEEESSSCCEEEEEEEEEECCCCC------------------------CHHHHHHHHHHHHTTCSCCCG
T ss_pred CCCEEEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 77549999999988369896777678999788775356556667654212367767608899999999998558983577
Q ss_pred CCCHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf 886546864420499940457983299988679879999999986123
Q 001820 672 RNSKLTQLLQDSLGGQAKTLMFVHISPEPDAVGETISTLKFAERVATV 719 (1009)
Q Consensus 672 RdSKLT~LLqdsLGGnskT~mI~~ISP~~~~~~ETLsTLrFA~Rvk~V 719 (1009)
||||||+||||+|||||+|+||+||||+..+++||++||+||+|++++
T Consensus 329 RdSkLT~LLqdsLgGnskT~mIa~isP~~~~~~ETlsTLrfA~Rv~~~ 376 (376)
T 2rep_A 329 RNSKLTYLLQNSLGGSAKMLMFVNISPLEENVSESLNSLRFASKVNQC 376 (376)
T ss_dssp GGSHHHHHTGGGTSTTCEEEEEEEECCCGGGHHHHHHHHHHHHHHC--
T ss_pred CCCHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 578889998986189870999999698522399999999999997429
No 5
>2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa}
Probab=1.00 E-value=1 Score=707.86 Aligned_cols=350 Identities=39% Similarity=0.601 Sum_probs=298.4
Q ss_pred HHHCCCCCEEEEEEECCCCCCCCCC-CCCEEEECC--CEEEEECCCCCC------------CCCEEEEECEEECC-----
Q ss_conf 3111699869999919999998888-753674159--939994799999------------98424880214099-----
Q 001820 387 QVQDLKGSIRVYCRVRPFLSGQSNY-LSTVDHIEE--GNITINTPSKHG------------KGWKSFSFNKVYGP----- 446 (1009)
Q Consensus 387 ~~qelkG~IrV~vRVRP~~~~E~~~-~~~v~~~~~--~~i~i~~p~~~g------------k~~k~F~FD~VF~~----- 446 (1009)
...|++++|||||||||+++.|... ..++..++. ..+++..|.... ...+.|.||+||++
T Consensus 32 ~~~~~~~~vrV~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~F~FD~vF~~~~~~~ 111 (443)
T 2owm_A 32 VSKDPGANVRVVVRVRAFLPRELERNAECIVEMDPATERTSLLVPQETDFADARGARSRRVLEEKSFTFDKSFWSHNTED 111 (443)
T ss_dssp --CCCCEECEEEEEEECCCHHHHHTTCCCCEEECSSSCEEEECCCC---------------CCCEEEECSEEEEESCTTS
T ss_pred CCCCCCCCEEEEEEECCCCHHHHHCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEECCEEECCCCCCC
T ss_conf 66789989499999399996886269945999758986279955887654333332123366772685273827877677
Q ss_pred --CCCHHHHHHHH-HHHHHHHHCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHC---CCEEE
Q ss_conf --98867699606-9999997468740187312569898614259999873322224679999999998712---65069
Q 001820 447 --SATQAEVFSDM-QPLIRSVLDGYNVCIFAYGQTGSGKTYTMTGPRELTEKSQGVNYRALSDLFLIAEQRK---DIFRY 520 (1009)
Q Consensus 447 --~atQeeVF~~v-~pLV~svldGyN~tIfAYGqTGSGKTyTM~G~~~~~~~~~GIipRal~dLF~~~~~~~---~~~~~ 520 (1009)
.++|++||+.+ .|+|+++++|||+||||||||||||||||+|+ .+++|||||++++||..++... ..+.|
T Consensus 112 ~~~asQ~~Vy~~~~~plv~~~l~GyN~tIfAYGQTGSGKTyTM~G~----~~~~GIipr~~~~lF~~i~~~~~~~~~~~~ 187 (443)
T 2owm_A 112 EHYATQEHVYDSLGEEFLDHNFEGYHTCIFAYGQTGSGKSYTMMGT----PDQPGLIPRTCEDLFQRIASAQDETPNISY 187 (443)
T ss_dssp TTCCCHHHHHHHHHHHHHHHHHTTCCEEEEEESSTTSSHHHHHTCC----TTSCCHHHHHHHHHHHHHHHTTTTSTTCEE
T ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEECC----CCCCCHHHHHHHHHHHHHHHHHCCCCCCEE
T ss_conf 6578799998763246888863687427998678899998886468----777753799999999988765213677349
Q ss_pred EEEEEEEEEECCEEEECCCCCC---CCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 9999999995461332346778---8864301047999734799929980798899999871101465334456578889
Q 001820 521 DVAVQMLEIYNEQVRDLLVTDG---SNRRLEIRNSSQTGLNVPDASLIPVSSTADVINLMNLGQKNRAVGATALNDRSSR 597 (1009)
Q Consensus 521 ~V~vS~lEIYnE~V~DLL~~~~---~~~~L~Ire~~~~g~~V~gltev~V~S~eev~~lL~~G~~nR~~~sT~~N~~SSR 597 (1009)
.|.|||+|||||+|+|||.+.. ....|.|++++.+|++|.|++++.|.+++|++.+|..|.++|++++|.||..|||
T Consensus 188 ~V~vS~lEIYnE~i~DLL~~~~~~~~~~~l~ire~~~~g~~V~gl~e~~V~s~~e~~~ll~~G~~~R~~~~T~~N~~SSR 267 (443)
T 2owm_A 188 NVKVSYFEVYNEHVRDLLAPVVPNKPPYYLKVRESPTEGPYVKDLTEVPVRGLEEIIRWMRIGDGSRTVASTKMNDTSSR 267 (443)
T ss_dssp EEEEEEEEEETTEEEETTSCCCSSCCCCCCEEEEETTTEEEEETCCCEECCSHHHHHHHHHHHHTTSCBCSSSSSCBCTT
T ss_pred EEEEEEEEEECCEEEECCCCCCCCCCCCCCCEEECCCCCEECCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 99999999988975685676345786534430377999995268779982899999999999973378633758776677
Q ss_pred CCEEEEEEEEEEECC----CCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-------
Q ss_conf 732899999655559----994689988988526884345775413449999898797999999999972189-------
Q 001820 598 SHSCLTVHVQGKDLT----SGTMYRGCMHLVDLAGSERVNKSEVTGDRLKEAQHINRSLSALGDVIASLAQKN------- 666 (1009)
Q Consensus 598 SH~IftI~V~~~~~~----~~~~~~s~L~LVDLAGSER~~ks~~~G~rlkEa~~INkSLsaLg~VI~ALa~k~------- 666 (1009)
||+||+|+|.+.... ......|+|+|||||||||+.+++++|+|++|+.+||+||++||+||.||++++
T Consensus 268 SH~Ifti~v~~~~~~~~~~~~~~~~skL~lVDLAGSER~~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~~~~~~~~~~ 347 (443)
T 2owm_A 268 SHAVFTIMLKQIHHDLETDDTTERSSRIRLVDLAGSERAKSTEATGQRLREGSNINKSLTTLGRVIAALADPKSSASRPS 347 (443)
T ss_dssp EEEEEEEEEEEEC-------CCEEEEEEEEEECCCCCC--------------CCSSHHHHHHHHHHHHHCC---------
T ss_pred CEEEEEEEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 71999999998603567887406887799997988753565677664121100105789999999999860455555444
Q ss_pred ---------------CCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC-CH
Q ss_conf ---------------99778886546864420499940457983299988679879999999986123048411247-93
Q 001820 667 ---------------PHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEPDAVGETISTLKFAERVATVELGAARVNK-DS 730 (1009)
Q Consensus 667 ---------------~hIPYRdSKLT~LLqdsLGGnskT~mI~~ISP~~~~~~ETLsTLrFA~Rvk~V~~~~~~vn~-~~ 730 (1009)
.||||||||||+||||+|||||+|+||+||||+ +++||++||+||+||++|++. +.+|. +.
T Consensus 348 ~~~~~g~~~~~~~~~~hVPYRdSkLTrLLqdsLgGnskT~mIa~iSP~--~~~ETlsTLrfA~rak~I~n~-~~vN~~d~ 424 (443)
T 2owm_A 348 SPVKSGRGRTPGPANSVVPYRDSVLTWLLKDSLGGNSKTAMIACISPT--DYDETLSTLRYADQAKRIRTR-AVVNQVDG 424 (443)
T ss_dssp ----------------CCCGGGSHHHHHSTTTTTSSCEEEEEEEECSS--CHHHHHHHHHHHHHHTTCEEC-CCCCCC--
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCC--CHHHHHHHHHHHHHHHHCCCC-CEECCCCC
T ss_conf 322234333445677745574547688888862799708999981643--078999999999998544563-33513577
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 7999999999999
Q 001820 731 SDVKELKEQIASL 743 (1009)
Q Consensus 731 ~~i~~LkeeI~~L 743 (1009)
........+|++|
T Consensus 425 ~~~~~~~~~~~~~ 437 (443)
T 2owm_A 425 VSAAERDAQIPSI 437 (443)
T ss_dssp -------------
T ss_pred CCHHHHHHHHHHH
T ss_conf 6678889999998
No 6
>2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A*
Probab=1.00 E-value=1 Score=705.90 Aligned_cols=343 Identities=37% Similarity=0.546 Sum_probs=302.8
Q ss_pred CCCCCEEEEEEECCCCCCCCCCC-CCEEEEC----CCEEEEECCCCCCCCCEEEEECEEECCCCCHHHHHHHH-HHHHHH
Q ss_conf 16998699999199999988887-5367415----99399947999999842488021409998867699606-999999
Q 001820 390 DLKGSIRVYCRVRPFLSGQSNYL-STVDHIE----EGNITINTPSKHGKGWKSFSFNKVYGPSATQAEVFSDM-QPLIRS 463 (1009)
Q Consensus 390 elkG~IrV~vRVRP~~~~E~~~~-~~v~~~~----~~~i~i~~p~~~gk~~k~F~FD~VF~~~atQeeVF~~v-~pLV~s 463 (1009)
+.+++|||||||||+.+.|.... ..+.... +..+.+ ..+.|.||+||+++++|++||+.+ .|+|++
T Consensus 8 ~~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~i~~--------~~~~f~FD~Vf~~~~~Q~~Vy~~~~~plv~~ 79 (365)
T 2y65_A 8 PAEDSIKVVCRFRPLNDSEEKAGSKFVVKFPNNVEENCISI--------AGKVYLFDKVFKPNASQEKVYNEAAKSIVTD 79 (365)
T ss_dssp CCEEECEEEEEECCCCHHHHHTTCCBCEECCSSSTTCEEEE--------TTEEEECSEEECTTCCHHHHHHHHTHHHHHH
T ss_pred CCCCCEEEEEECCCCCHHHHCCCCCEEEEECCCCCCCEEEE--------CCEEEECCEEECCCCCHHHHHHHHHHHHHHH
T ss_conf 89999599999496994673159925999479987767998--------9989867469647899899999863037799
Q ss_pred HHCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEECCEEEECCCCCCC
Q ss_conf 74687401873125698986142599998733222246799999999987126506999999999954613323467788
Q 001820 464 VLDGYNVCIFAYGQTGSGKTYTMTGPRELTEKSQGVNYRALSDLFLIAEQRKDIFRYDVAVQMLEIYNEQVRDLLVTDGS 543 (1009)
Q Consensus 464 vldGyN~tIfAYGqTGSGKTyTM~G~~~~~~~~~GIipRal~dLF~~~~~~~~~~~~~V~vS~lEIYnE~V~DLL~~~~~ 543 (1009)
+++|||+||||||||||||||||+|+.. ....+|||||++++||..+......+.|.|.+||+|||||+|+|||.+.
T Consensus 80 ~l~G~n~tifAYGqTGSGKTyTm~G~~~-~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~-- 156 (365)
T 2y65_A 80 VLAGYNGTIFAYGQTSSGKTHTMEGVIG-DSVKQGIIPRIVNDIFNHIYAMEVNLEFHIKVSYYEIYMDKIRDLLDVS-- 156 (365)
T ss_dssp HHTTCCEEEEEECSTTSSHHHHHTBSTT-CTTTBCHHHHHHHHHHHHHHHCCSCEEEEEEEEEEEEETTEEEETTCTT--
T ss_pred HHCCCCEEEEEECCCCCCCCEEEECCCC-CCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCEEEECCCCC--
T ss_conf 8679824898345899999648866888-7555773779999999999833689539999999999877212622587--
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEEEEEEE
Q ss_conf 86430104799973479992998079889999987110146533445657888973289999965555999468998898
Q 001820 544 NRRLEIRNSSQTGLNVPDASLIPVSSTADVINLMNLGQKNRAVGATALNDRSSRSHSCLTVHVQGKDLTSGTMYRGCMHL 623 (1009)
Q Consensus 544 ~~~L~Ire~~~~g~~V~gltev~V~S~eev~~lL~~G~~nR~~~sT~~N~~SSRSH~IftI~V~~~~~~~~~~~~s~L~L 623 (1009)
...+.+++++..+++|.|++++.|.+++|++.+|..|.++|++++|.||.+|||||+||+|+|.+.+...+....|+|+|
T Consensus 157 ~~~l~i~e~~~~~~~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~skL~l 236 (365)
T 2y65_A 157 KVNLSVHEDKNRVPYVKGATERFVSSPEDVFEVIEEGKSNRHIAVTNMNEHSSRSHSVFLINVKQENLENQKKLSGKLYL 236 (365)
T ss_dssp CCSBCEEECSSSCEEETTCCCEEECSHHHHHHHHHHHHHHHTTTCSCHHHHHHTSEEEEEEEEEEEETTTCCEEEEEEEE
T ss_pred CCCCEEEECCCCCEEECCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEEEEE
T ss_conf 67723788799987842788996587999999999998646652356888788763999999999705888786899999
Q ss_pred EECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCC
Q ss_conf 852688434577541344999989879799999999997218-9997788865468644204999404579832999886
Q 001820 624 VDLAGSERVNKSEVTGDRLKEAQHINRSLSALGDVIASLAQK-NPHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEPDA 702 (1009)
Q Consensus 624 VDLAGSER~~ks~~~G~rlkEa~~INkSLsaLg~VI~ALa~k-~~hIPYRdSKLT~LLqdsLGGnskT~mI~~ISP~~~~ 702 (1009)
||||||||+.++++.|.|++|+.+||+||++||+||.||+++ ..||||||||||+||||+|||||+|+||+||||+..+
T Consensus 237 VDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mI~~isP~~~~ 316 (365)
T 2y65_A 237 VDLAGSEKVSKTGAEGTVLDEAKNINKSLSALGNVISALADGNKTHIPYRDSKLTRILQESLGGNARTTIVICCSPASFN 316 (365)
T ss_dssp EECCCCCC----------------CCHHHHHHHHHHHHHHHCCCSCCCGGGCHHHHHTGGGTTSSSEEEEEEEECCBGGG
T ss_pred EECCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCC
T ss_conf 97999882012189522478998888889999989999852788878663578889877613899637999984675278
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCHH---HHHHHHHHHHHHH
Q ss_conf 79879999999986123048411247937---9999999999999
Q 001820 703 VGETISTLKFAERVATVELGAARVNKDSS---DVKELKEQIASLK 744 (1009)
Q Consensus 703 ~~ETLsTLrFA~Rvk~V~~~~~~vn~~~~---~i~~LkeeI~~Lk 744 (1009)
++||++||+||+||+.|++. +.+|.+.. .++++++|+++|+
T Consensus 317 ~~ETl~TL~fA~rak~I~n~-~~~n~~~~~~~~~~~~~~e~~~~~ 360 (365)
T 2y65_A 317 ESETKSTLDFGRRAKTVKNV-VCVNEELTAEEWKRRYEKEKEKNA 360 (365)
T ss_dssp HHHHHHHHHHHHHHTTCEEE-CCCEEECCSHHHHHC---------
T ss_pred HHHHHHHHHHHHHHHCCCCC-CEECCCCCHHHHHHHHHHHHHHHH
T ss_conf 89999999999997215675-411788999999999999999999
No 7
>3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens}
Probab=1.00 E-value=1 Score=705.70 Aligned_cols=338 Identities=38% Similarity=0.548 Sum_probs=302.8
Q ss_pred HHHHHCCCCCEEEEEEECCCCCCCCCC--CCCEEEECCCEEEEECCCCCCCCCEEEEECEEECCCCCHHHHHHH-HHHHH
Q ss_conf 333111699869999919999998888--753674159939994799999984248802140999886769960-69999
Q 001820 385 YNQVQDLKGSIRVYCRVRPFLSGQSNY--LSTVDHIEEGNITINTPSKHGKGWKSFSFNKVYGPSATQAEVFSD-MQPLI 461 (1009)
Q Consensus 385 ~n~~qelkG~IrV~vRVRP~~~~E~~~--~~~v~~~~~~~i~i~~p~~~gk~~k~F~FD~VF~~~atQeeVF~~-v~pLV 461 (1009)
|-+.++.+++|||+|||||+.+.|... ..++...++.++.+..+.. ....+.|.||+||+++++|++||+. +.|+|
T Consensus 13 ~~~~~~~~~~irV~vRvRP~~~~E~~~~~~~~v~~~~~~~~~i~~~~~-~~~~~~f~FD~Vf~~~~tQ~~Vy~~~~~plv 91 (388)
T 3bfn_A 13 NLYFQGPPARVRVAVRLRPFVDGTAGASDPPCVRGMDSCSLEIANWRN-HQETLKYQFDAFYGERSTQQDIYAGSVQPIL 91 (388)
T ss_dssp -CCSSSCCCCCEEEEEECCCC------------------------------CEEEEECSEEECTTCCHHHHHHHHTGGGH
T ss_pred CCCCCCCCCCEEEEEECCCCCHHHHCCCCCCEEEECCCCEEEEECCCC-CCCEEEEECCEEECCCCCHHHHHHHHHHHHH
T ss_conf 344568999979999779899145346998639955998599956888-8770598723695678977577899888888
Q ss_pred HHHHCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH---CCCEEEEEEEEEEEEECCEEEECC
Q ss_conf 99746874018731256989861425999987332222467999999999871---265069999999999546133234
Q 001820 462 RSVLDGYNVCIFAYGQTGSGKTYTMTGPRELTEKSQGVNYRALSDLFLIAEQR---KDIFRYDVAVQMLEIYNEQVRDLL 538 (1009)
Q Consensus 462 ~svldGyN~tIfAYGqTGSGKTyTM~G~~~~~~~~~GIipRal~dLF~~~~~~---~~~~~~~V~vS~lEIYnE~V~DLL 538 (1009)
+++++|||+||||||||||||||||+|+ ..++|||||++++||..+... ...+.|.|.+||+|||||+|+|||
T Consensus 92 ~~~l~G~N~tifAYGqTGSGKTyTM~G~----~~~~Giipra~~~lF~~i~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL 167 (388)
T 3bfn_A 92 RHLLEGQNASVLAYGPTGAGKTHTMLGS----PEQPGVIPRALMDLLQLTREEGAEGRPWALSVTMSYLEIYQEKVLDLL 167 (388)
T ss_dssp HHHTTTCCEEEEEESCTTSSHHHHHTBC----SSSBCHHHHHHHHHHHHHHHHTSTTCSEEEEEEEEEEEEETTEEEESS
T ss_pred HHHHCCCEEEEEEECCCCCCCCEEEECC----CCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCEEEEHH
T ss_conf 8761696566761168889997686567----556641689999999999874233777148999999999888645600
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCC-CCEE
Q ss_conf 677888643010479997347999299807988999998711014653344565788897328999996555599-9468
Q 001820 539 VTDGSNRRLEIRNSSQTGLNVPDASLIPVSSTADVINLMNLGQKNRAVGATALNDRSSRSHSCLTVHVQGKDLTS-GTMY 617 (1009)
Q Consensus 539 ~~~~~~~~L~Ire~~~~g~~V~gltev~V~S~eev~~lL~~G~~nR~~~sT~~N~~SSRSH~IftI~V~~~~~~~-~~~~ 617 (1009)
.+. ...+.|++++.++++|.|++++.|.+++|++.+|..|.++|++++|.||.+|||||+||+|+|.+.+... ....
T Consensus 168 ~~~--~~~l~ired~~~~v~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~~~~~~ 245 (388)
T 3bfn_A 168 DPA--SGDLVIREDCRGNILIPGLSQKPISSFADFERHFLPASRNRTVGATRLNQRSSRSHAVLLVKVDQRERLAPFRQR 245 (388)
T ss_dssp SCS--SCBCCCEECTTSCEECTTCCCEECCSHHHHHHHHHHHTC-----------CGGGSEEEEEEEEEEEESSTTCCEE
T ss_pred CCC--CCCCEEEECCCCCEEECCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCEE
T ss_conf 167--888459986999988536059995899999999999750265223647787777739999999982268887336
Q ss_pred EEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECC
Q ss_conf 99889885268843457754134499998987979999999999721899977888654686442049994045798329
Q 001820 618 RGCMHLVDLAGSERVNKSEVTGDRLKEAQHINRSLSALGDVIASLAQKNPHVPYRNSKLTQLLQDSLGGQAKTLMFVHIS 697 (1009)
Q Consensus 618 ~s~L~LVDLAGSER~~ks~~~G~rlkEa~~INkSLsaLg~VI~ALa~k~~hIPYRdSKLT~LLqdsLGGnskT~mI~~IS 697 (1009)
.|+|+|||||||||..++++.|.|++|+.+||+||++||+||.||+++..||||||||||+||||+|||||+|+||+|||
T Consensus 246 ~skL~lVDLAGSEr~~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~~~~hVPYRdSkLTrlLqdsLgGnskT~mIa~iS 325 (388)
T 3bfn_A 246 EGKLYLIDLAGSEDNRRTGNKGLRLKESGAINTSLFVLGKVVDALNQGLPRVPYRDSKLTRLLQDSLGGSAHSILIANIA 325 (388)
T ss_dssp EEEEEEEECCCTTC--------------CCCCHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHTTTSSSTTCEEEEEEEEC
T ss_pred EEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEC
T ss_conf 88999998987766554567551147776750639999999999966999886756588999998608996289999979
Q ss_pred CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCH
Q ss_conf 998867987999999998612304841124793
Q 001820 698 PEPDAVGETISTLKFAERVATVELGAARVNKDS 730 (1009)
Q Consensus 698 P~~~~~~ETLsTLrFA~Rvk~V~~~~~~vn~~~ 730 (1009)
|+..+++||++||+||+|++.|++. +.+|.+.
T Consensus 326 P~~~~~~ETlsTLrfA~rak~I~n~-p~~n~~~ 357 (388)
T 3bfn_A 326 PERRFYLDTVSALNFAARSKEVINR-PFTNESL 357 (388)
T ss_dssp CSGGGHHHHHHHHHHHCSEEEEC----------
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCC-CCCCCCC
T ss_conf 8500089999999999998517576-7356789
No 8
>3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii}
Probab=1.00 E-value=1 Score=705.64 Aligned_cols=328 Identities=43% Similarity=0.719 Sum_probs=292.4
Q ss_pred HCCCCCEEEEEEECCCCCCCCCCCCCEE--EEC--CC--EEEEECCCCCCCCCEEEEECEEECCCCCHHHHHHHHHHHHH
Q ss_conf 1169986999991999999888875367--415--99--39994799999984248802140999886769960699999
Q 001820 389 QDLKGSIRVYCRVRPFLSGQSNYLSTVD--HIE--EG--NITINTPSKHGKGWKSFSFNKVYGPSATQAEVFSDMQPLIR 462 (1009)
Q Consensus 389 qelkG~IrV~vRVRP~~~~E~~~~~~v~--~~~--~~--~i~i~~p~~~gk~~k~F~FD~VF~~~atQeeVF~~v~pLV~ 462 (1009)
++|||||||||||||+++.|......+. ..+ .+ .+.+..+. .....+.|.||+||+++++|++||+++.|+|+
T Consensus 1 m~lkgnIrV~vRvRP~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~f~FD~Vf~~~~~Q~~vf~~v~~lv~ 79 (349)
T 3t0q_A 1 MALRGNIRVYCRVRPPLLNEPQDMSHILIEKFNEAKGAQSLTINRNE-GRILSYNFQFDMIFEPSHTNKEIFEEIRQLVQ 79 (349)
T ss_dssp ----CEEEEEEEECCCCTTSCCCCTTEEECCCBC--CBEEEEEEECC---CEEEEEEESEEECTTCCHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCC-CCCCCEEEECCEEECCCCCHHHHHHHHHHHHH
T ss_conf 99899838999969799552236863788612677884389984788-86441466568797987668899999999999
Q ss_pred HHHCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH-CCCEEEEEEEEEEEEECCEEEECCCCC
Q ss_conf 9746874018731256989861425999987332222467999999999871-265069999999999546133234677
Q 001820 463 SVLDGYNVCIFAYGQTGSGKTYTMTGPRELTEKSQGVNYRALSDLFLIAEQR-KDIFRYDVAVQMLEIYNEQVRDLLVTD 541 (1009)
Q Consensus 463 svldGyN~tIfAYGqTGSGKTyTM~G~~~~~~~~~GIipRal~dLF~~~~~~-~~~~~~~V~vS~lEIYnE~V~DLL~~~ 541 (1009)
++++|||+||||||||||||||||+|+ ..|||||++++||..++.. ...+.|.|.+||+|||||+|+|||.+.
T Consensus 80 ~~l~G~n~tifAYGqTGSGKTyTm~g~------~~Giipr~~~~lF~~~~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~ 153 (349)
T 3t0q_A 80 SSLDGYNVCIFAYGQTGSGKTYTMLNA------GDGMIPMTLSHIFKWTANLKERGWNYEMECEYIEIYNETILDLLRDF 153 (349)
T ss_dssp GGGTTCEEEEEEECSTTSSHHHHHHST------TTSHHHHHHHHHHHHHHHHGGGTEEEEEEEEEEEEETTEEEETTC--
T ss_pred HHHCCCCEEEEEECCCCCCCCEEECCC------CCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCHHHCCCCCC
T ss_conf 997795236888678999996375899------88446679999999998755048526899999999756011023564
Q ss_pred C---------CCCCCCCCCCCC-CCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEEEC
Q ss_conf 8---------886430104799-973479992998079889999987110146533445657888973289999965555
Q 001820 542 G---------SNRRLEIRNSSQ-TGLNVPDASLIPVSSTADVINLMNLGQKNRAVGATALNDRSSRSHSCLTVHVQGKDL 611 (1009)
Q Consensus 542 ~---------~~~~L~Ire~~~-~g~~V~gltev~V~S~eev~~lL~~G~~nR~~~sT~~N~~SSRSH~IftI~V~~~~~ 611 (1009)
. ....+.|+++.. +|++|.|++++.|.+++|++.+|..|.++|++++|.||+.|||||+||+|+|++.+.
T Consensus 154 ~~~~~~~~~~~~~~~~i~~~~~~~g~~v~~l~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~ 233 (349)
T 3t0q_A 154 KSHDNIDEILDSQKHDIRHDHEKQGTYITNVTRMKMTSTSQVDTILKKASKMRSTAATRSNERSSRSHSVFMVHINGRNL 233 (349)
T ss_dssp -------------CCCEEEETTTTEEEETTCCCEECCCHHHHHHHHHHC------------CTGGGSEEEEEEEEEEEET
T ss_pred CCCCCCCCCCCCCCCEEEEECCCCCEEEECCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEC
T ss_conf 54454222356666405896698988971987999489999999999999737602345645467752589999997735
Q ss_pred CCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---CCCCCCCCHHHHHHHHHCCCCC
Q ss_conf 9994689988988526884345775413449999898797999999999972189---9977888654686442049994
Q 001820 612 TSGTMYRGCMHLVDLAGSERVNKSEVTGDRLKEAQHINRSLSALGDVIASLAQKN---PHVPYRNSKLTQLLQDSLGGQA 688 (1009)
Q Consensus 612 ~~~~~~~s~L~LVDLAGSER~~ks~~~G~rlkEa~~INkSLsaLg~VI~ALa~k~---~hIPYRdSKLT~LLqdsLGGns 688 (1009)
..+....|+|+|||||||||+.+++++|+|++|+.+||+||++||+||.||++++ .||||||||||+||||+|||||
T Consensus 234 ~~~~~~~~kL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~~~hiPyRdSkLT~lLqdsLgGns 313 (349)
T 3t0q_A 234 HTGETSQGKLNLVDLAGSERINSSAVTGERLRETQNINKSLSCLGDVIYALNTPDAGKRYIPFRNSKLTYLLQYSLVGDS 313 (349)
T ss_dssp TTCCEEEEEEEEEECCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHHHHHSTTGGGSCCCGGGSHHHHHHGGGSSTTC
T ss_pred CCCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCC
T ss_conf 88986579999994899875444567531005577651749999999999855368888577747888898898638996
Q ss_pred EEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 04579832999886798799999999861230484
Q 001820 689 KTLMFVHISPEPDAVGETISTLKFAERVATVELGA 723 (1009)
Q Consensus 689 kT~mI~~ISP~~~~~~ETLsTLrFA~Rvk~V~~~~ 723 (1009)
+|+|||||||+..+++||++||+||+|++.|++++
T Consensus 314 kt~mi~~vsP~~~~~~ETl~TL~fA~rv~~ik~~~ 348 (349)
T 3t0q_A 314 KTLMFVNIPPDPNHISETLNSLRFASKVNSTKIAK 348 (349)
T ss_dssp EEEEEEEECCCGGGHHHHHHHHHHHHHHHC-----
T ss_pred EEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 49999980886213999999999999860163479
No 9
>3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A*
Probab=1.00 E-value=1 Score=704.64 Aligned_cols=344 Identities=41% Similarity=0.658 Sum_probs=305.8
Q ss_pred HHHHHCCCCCEEEEEEECCCCCCCCCC--CCCEEE-ECCCEEEEECCCCCC-CCCEEEEECEEECCCCCHHHHHHH-HHH
Q ss_conf 333111699869999919999998888--753674-159939994799999-984248802140999886769960-699
Q 001820 385 YNQVQDLKGSIRVYCRVRPFLSGQSNY--LSTVDH-IEEGNITINTPSKHG-KGWKSFSFNKVYGPSATQAEVFSD-MQP 459 (1009)
Q Consensus 385 ~n~~qelkG~IrV~vRVRP~~~~E~~~--~~~v~~-~~~~~i~i~~p~~~g-k~~k~F~FD~VF~~~atQeeVF~~-v~p 459 (1009)
....++.+++|||+|||||+.+.|... ..++.. ..++++.+..|.... ...+.|.||+||+++++|++||+. +.|
T Consensus 13 ~~~~~~~~~~irV~vRvRP~~~~E~~~~~~~~v~~~~~~~~v~v~~~~~~~~~~~~~F~FD~Vf~~~~~Q~~Vy~~~~~p 92 (372)
T 3b6u_A 13 NLYFQGSSESVRVVVRCRPMNGKEKAASYDKVVDVDVKLGQVSVKNPKGTAHEMPKTFTFDAVYDWNAKQFELYDETFRP 92 (372)
T ss_dssp --------CBCEEEEEECCCCHHHHHTTCCBCEEEETTTTEEEECCTTCTTTCCCEEEECSEEECTTCCHHHHHHHTHHH
T ss_pred CCCCCCCCCCEEEEEECCCCCHHHHCCCCCEEEEEECCCCEEEEECCCCCCCCCCEEEECCEEECCCCCHHHHHHHHHHH
T ss_conf 67667899983999986989935530499638999589987999778877777843887686968867417898878777
Q ss_pred HHHHHHCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEECCEEEECCC
Q ss_conf 99997468740187312569898614259999873322224679999999998712650699999999995461332346
Q 001820 460 LIRSVLDGYNVCIFAYGQTGSGKTYTMTGPRELTEKSQGVNYRALSDLFLIAEQRKDIFRYDVAVQMLEIYNEQVRDLLV 539 (1009)
Q Consensus 460 LV~svldGyN~tIfAYGqTGSGKTyTM~G~~~~~~~~~GIipRal~dLF~~~~~~~~~~~~~V~vS~lEIYnE~V~DLL~ 539 (1009)
+|+++++|||+||||||||||||||||+|+.. .+..+|||||++++||..+.. ...+.|.|++||+|||||+|+|||.
T Consensus 93 lv~~~l~G~n~tifAYGqTGSGKTyTM~G~~~-~~~~~Giipr~~~~lF~~i~~-~~~~~~~v~vS~~EIYnE~i~DLL~ 170 (372)
T 3b6u_A 93 LVDSVLQGFNGTIFAYGQTGTGKTYTMEGIRG-DPEKRGVIPNSFDHIFTHISR-SQNQQYLVRASYLEIYQEEIRDLLS 170 (372)
T ss_dssp HHHHHHTTCCEEEEEEESTTSSHHHHHTBCTT-SGGGBCHHHHHHHHHHHHHHT-CSSCEEEEEEEEEEEETTEEEETTS
T ss_pred HHHHHHCCCEEEEEEECCCCCCCCEEEECCCC-CCCCCCCHHHHHHHHHHHHHH-CCCCCEEEEEEEEEEECCEEEECCC
T ss_conf 78998679813588656899999875755899-834488188999999998651-4577369999899996788899778
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEEECC---CCCE
Q ss_conf 7788864301047999734799929980798899999871101465334456578889732899999655559---9946
Q 001820 540 TDGSNRRLEIRNSSQTGLNVPDASLIPVSSTADVINLMNLGQKNRAVGATALNDRSSRSHSCLTVHVQGKDLT---SGTM 616 (1009)
Q Consensus 540 ~~~~~~~L~Ire~~~~g~~V~gltev~V~S~eev~~lL~~G~~nR~~~sT~~N~~SSRSH~IftI~V~~~~~~---~~~~ 616 (1009)
++. ...+.|++++.+|++|.|++++.|.+++|++.+|..|.++|++++|.||..|||||+||+|+|++.+.. ....
T Consensus 171 ~~~-~~~l~i~e~~~~~v~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~~~~~~~ 249 (372)
T 3b6u_A 171 KDQ-TKRLELKERPDTGVYVKDLSSFVTKSVKEIEHVMNVGNQNRSVGATNMNEHSSRSHAIFVITIECSEVGLDGENHI 249 (372)
T ss_dssp SCT-TCCBCEEEETTTEEEETTCCCEECCSHHHHHHHHHHHHHHHTTTCSSHHHHHHTSEEEEEEEEEEEC-----CCCE
T ss_pred CCC-CCCCEEEECCCCCEECCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCE
T ss_conf 977-7773689879996752898899926799999999999976672545577877764299999999960477887626
Q ss_pred EEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCCCCCCCHHHHHHHHHCCCCCEEEEEEE
Q ss_conf 89988988526884345775413449999898797999999999972189-99778886546864420499940457983
Q 001820 617 YRGCMHLVDLAGSERVNKSEVTGDRLKEAQHINRSLSALGDVIASLAQKN-PHVPYRNSKLTQLLQDSLGGQAKTLMFVH 695 (1009)
Q Consensus 617 ~~s~L~LVDLAGSER~~ks~~~G~rlkEa~~INkSLsaLg~VI~ALa~k~-~hIPYRdSKLT~LLqdsLGGnskT~mI~~ 695 (1009)
..|+|+|||||||||+.++++.|+|++|+.+||+||++||+||.||++++ .||||||||||+||||+|||||+|+||+|
T Consensus 250 ~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~ 329 (372)
T 3b6u_A 250 RVGKLNLVDLAGSERQAKTGAQGERLKEATKINLSLSALGNVISALVDGKSTHIPYRDSKLTRLLQDSLGGNAKTVMVAN 329 (372)
T ss_dssp EEEEEEEEECCCCCE----------EEEGGGCCHHHHHHHHHHHHHHCC---CCCGGGSHHHHHTTTTTTSSSEEEEEEE
T ss_pred EEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEE
T ss_conf 78899999798876554457515431467565064999999999986389887866220889999986299954899999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
Q ss_conf 2999886798799999999861230484112479379
Q 001820 696 ISPEPDAVGETISTLKFAERVATVELGAARVNKDSSD 732 (1009)
Q Consensus 696 ISP~~~~~~ETLsTLrFA~Rvk~V~~~~~~vn~~~~~ 732 (1009)
|||+..+++||++||+||+|+++|++ .+++|.++.+
T Consensus 330 vsP~~~~~~ETlsTLrfA~rak~I~n-~~~~n~~~~~ 365 (372)
T 3b6u_A 330 VGPASYNVEETLTTLRYANRAKNIKN-KPRVNEDPKD 365 (372)
T ss_dssp ECCBGGGHHHHHHHHHHHHHHTTCBC-CCCCCC----
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHCCC-CCEECCCHHH
T ss_conf 68852479999999999999864556-6625577579
No 10
>3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} SCOP: c.37.1.0
Probab=1.00 E-value=1 Score=701.61 Aligned_cols=329 Identities=39% Similarity=0.610 Sum_probs=295.4
Q ss_pred HHHHHHCCCCCEEEEEEECCCCCCCCCC-CCCEEEECCCEEEEECCCCC------------------CCCCEEEEECEEE
Q ss_conf 5333111699869999919999998888-75367415993999479999------------------9984248802140
Q 001820 384 LYNQVQDLKGSIRVYCRVRPFLSGQSNY-LSTVDHIEEGNITINTPSKH------------------GKGWKSFSFNKVY 444 (1009)
Q Consensus 384 l~n~~qelkG~IrV~vRVRP~~~~E~~~-~~~v~~~~~~~i~i~~p~~~------------------gk~~k~F~FD~VF 444 (1009)
++++.+|++++|||+|||||++..|... ...++.+.+..+.+.+|... ....+.|.||+||
T Consensus 1 ~~~~~~d~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~FD~vf 80 (355)
T 3lre_A 1 MSVTEEDLCHHMKVVVRVRPENTKEKAAGFHKVVHVVDKHILVFDPKQEEVSFFHGKKTTNQNVIKKQNKDLKFVFDAVF 80 (355)
T ss_dssp -----------CEEEEEECCCCHHHHHTTCCBSEEECSSSEEEEC------------------------CCEEEECSEEE
T ss_pred CCCCHHHCCCCCEEEEEECCCCHHHHHCCCCEEEEECCCCEEEECCCCCCCEEECCCCCCCCCCHHCCCCCCEEEECEEE
T ss_conf 98670223678789999396995787559954999659966985688774112035554444300026787168705687
Q ss_pred CCCCCHHHHHHH-HHHHHHHHHCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf 999886769960-6999999746874018731256989861425999987332222467999999999871265069999
Q 001820 445 GPSATQAEVFSD-MQPLIRSVLDGYNVCIFAYGQTGSGKTYTMTGPRELTEKSQGVNYRALSDLFLIAEQRKDIFRYDVA 523 (1009)
Q Consensus 445 ~~~atQeeVF~~-v~pLV~svldGyN~tIfAYGqTGSGKTyTM~G~~~~~~~~~GIipRal~dLF~~~~~~~~~~~~~V~ 523 (1009)
+++++|++||+. +.|+|+++++|||+||||||||||||||||+|+ ..++||+||++++||..++.......|.|.
T Consensus 81 ~~~~~Q~~Vy~~~~~plv~~~l~G~n~tifAYGqTGSGKTyTm~G~----~~~~Giipr~~~~lf~~i~~~~~~~~~~v~ 156 (355)
T 3lre_A 81 DETSTQSEVFEHTTKPILRSFLNGYNCTVLAYGATGAGKTHTMLGS----ADEPGVMYLTMLHLYKCMDEIKEEKICSTA 156 (355)
T ss_dssp CTTCCHHHHHHTTHHHHHHHHTTTCCEEEEEECCTTSSHHHHHTBC----SSSBCHHHHHHHHHHHHHHHTTTTEEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEECCC----CCCCCEEEHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 9988768999999999999873799469997188999724223168----988870102446777766520457359999
Q ss_pred EEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEE
Q ss_conf 99999954613323467788864301047999734799929980798899999871101465334456578889732899
Q 001820 524 VQMLEIYNEQVRDLLVTDGSNRRLEIRNSSQTGLNVPDASLIPVSSTADVINLMNLGQKNRAVGATALNDRSSRSHSCLT 603 (1009)
Q Consensus 524 vS~lEIYnE~V~DLL~~~~~~~~L~Ire~~~~g~~V~gltev~V~S~eev~~lL~~G~~nR~~~sT~~N~~SSRSH~Ift 603 (1009)
+||+|||||+|+|||.+. ..+.+++++.+|++|.|++++.|.+.+|++.+|..|.++|++++|.||..|||||+||+
T Consensus 157 vS~~EIYnE~i~DLL~~~---~~l~ire~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~ 233 (355)
T 3lre_A 157 VSYLEVYNEQIRDLLVNS---GPLAVREDTQKGVVVHGLTLHQPKSSEEILHLLDNGNKNRTQHPTDMNATSSRSHAVFQ 233 (355)
T ss_dssp EEEEEEETTEEEESSSCC---CCBEEEECTTSCEEEETCCCBCCCSHHHHHHHHHHHHHTSCBC-----CBCTTCEEEEE
T ss_pred EEEEEEECCEEEECCCCC---CCCEEEECCCCCEEEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE
T ss_conf 999999878779976787---77236884899988533369953999999999999873277432657687787829999
Q ss_pred EEEEEEECCC---CCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCCCHHH
Q ss_conf 9996555599---9468998898852688434577541344999989879799999999997218---999778886546
Q 001820 604 VHVQGKDLTS---GTMYRGCMHLVDLAGSERVNKSEVTGDRLKEAQHINRSLSALGDVIASLAQK---NPHVPYRNSKLT 677 (1009)
Q Consensus 604 I~V~~~~~~~---~~~~~s~L~LVDLAGSER~~ks~~~G~rlkEa~~INkSLsaLg~VI~ALa~k---~~hIPYRdSKLT 677 (1009)
|+|.+.+... .....|+|+|||||||||+.++++.|+|++|+.+||+||++||+||.||++. ..||||||||||
T Consensus 234 i~v~~~~~~~~~~~~~~~skl~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~~~hiPyRdSkLT 313 (355)
T 3lre_A 234 IYLRQQDKTASINQNVRIAKMSLIDLAGSERASTSGAKGTRFVEGTNINRSLLALGNVINALADSKRKNQHIPYRNSKLT 313 (355)
T ss_dssp EEEEEEETTSCTTCCCCCEEEEEEECCCCCC-----------------CHHHHHHHHHHHHHC--------CCGGGSHHH
T ss_pred EEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
T ss_conf 99999657788887777999999979887757677873378999999989999998799998714588986876337888
Q ss_pred HHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf 864420499940457983299988679879999999986123
Q 001820 678 QLLQDSLGGQAKTLMFVHISPEPDAVGETISTLKFAERVATV 719 (1009)
Q Consensus 678 ~LLqdsLGGnskT~mI~~ISP~~~~~~ETLsTLrFA~Rvk~V 719 (1009)
+||||+|||||+|+||+||||+..+++||++||+||+||++|
T Consensus 314 ~lL~dsLgGnskt~mIa~isP~~~~~~ETl~TL~fA~rak~I 355 (355)
T 3lre_A 314 RLLKDSLGGNCQTIMIAAVSPSSVFYDDTYNTLKYANRAKDI 355 (355)
T ss_dssp HHTTTTSSTTSEEEEEEEECCBGGGHHHHHHHHHHHHHTC--
T ss_pred HHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCC
T ss_conf 988986489965999999488622389999999999985659
Done!