Query 001824
Match_columns 1009
No_of_seqs 341 out of 3372
Neff 8.3
Searched_HMMs 29240
Date Tue Mar 26 16:19:57 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001824.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1121-1125//hhsearch_pdb/001824hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ar4_A Sarcoplasmic/endoplasmi 1.0 1 1 803.5 52.6 737 61-947 205-992 (995)
2 2zxe_A Na, K-ATPase alpha subu 1.0 1 1 791.4 47.5 740 42-947 207-1017(1028)
3 3ixz_A Potassium-transporting 1.0 1 1 784.7 63.2 730 52-949 228-1025(1034)
4 1mhs_A Proton pump, plasma mem 1.0 1 1 678.1 31.6 637 53-947 231-881 (920)
5 3b8c_A ATPase 2, plasma membra 1.0 1 1 665.0 -9.3 651 52-948 181-845 (885)
6 3j09_A COPA, copper-exporting 1.0 1 1 468.7 34.6 429 32-745 232-676 (723)
7 3rfu_A Copper efflux ATPase; a 1.0 1 1 468.1 32.9 414 52-745 276-696 (736)
8 3j08_A COPA, copper-exporting 1.0 1 1 461.9 33.0 408 53-745 184-598 (645)
9 2yj3_A Copper-transporting ATP 1.0 1 1 211.4 0.0 138 502-729 123-262 (263)
10 3a1c_A Probable copper-exporti 1.0 1 1 174.2 26.9 272 211-728 14-287 (287)
No 1
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...
Probab=1.00 E-value=1 Score=803.49 Aligned_cols=737 Identities=20% Similarity=0.217 Sum_probs=530.8
Q ss_pred CCCEEECCEEEECCCEEEEEEEEECCCCHH---HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 996687030880489499999984572001---10279999986969899989999999999999999999876420223
Q 001824 61 PQQLLLRDSKLRNTDYIYGAVVFTGHDTKV---IQNSTDPPSKRSRIERKMDQIIYFMFFVVFTVAFVGSIFFGVITERD 137 (1009)
Q Consensus 61 ~~n~llrGs~l~nt~~~~gvVv~tG~~Tki---~~n~~~~~~k~s~le~~~n~~~~~~~~~~~~~~~i~~i~~~~~~~~~ 137 (1009)
.+|++++||.+++ |+++|+|++||++|++ ++....++.+++++++.+|+++..+..+.+++|++.+++...+.. .
T Consensus 205 ~~~~v~~GT~v~~-G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 282 (995)
T 3ar4_A 205 KKNMLFSGTNIAA-GKALGIVATTGVSTEIGKIRDQMAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFN-D 282 (995)
T ss_dssp CTTEECTTCEEEE-CEEEEEEEECGGGSHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGG-S
T ss_pred CCCEEECCCEEEC-CEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-C
T ss_conf 4546761878984-4589999976722198999997325787899389999999999999999999999999998741-4
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 67732233344789998545899914688999999999862132440024589999998977622522233336988301
Q 001824 138 LDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYLIPISLYVSIEIVKVLQSIFINQDVQMYYEEADTPAHA 217 (1009)
Q Consensus 138 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~i~~~~~~~~~~i~~d~~m~~~~~~~~~~~ 217 (1009)
++. ...+.......|..++.+++.+||++||++++++...++.++ +++++++
T Consensus 283 -------~~~-----------~~~~~~~~~~~~~~ai~l~v~aiP~~Lp~~vt~~la~~~~~m----------a~~~~lv 334 (995)
T 3ar4_A 283 -------PVH-----------GGSWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRM----------AKKNAIV 334 (995)
T ss_dssp -------CSS-----------SSCHHHHHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HHTTEEE
T ss_pred -------CCC-----------CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH----------CCCCCEE
T ss_conf -------334-----------640799999999999999998667604899999999999984----------4178486
Q ss_pred CCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEECCEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 57420001246159997488974113159999999384327880489998643069886333468887543336999888
Q 001824 218 RTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEEDLTESRPSVK 297 (1009)
Q Consensus 218 r~~~~~E~LG~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1009)
|+++.+|+||+|++||||||||||+|+|++.++++.+..++......+ . .-.+..
T Consensus 335 r~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~--~-~~~~~~---------------------- 389 (995)
T 3ar4_A 335 RSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNE--F-SITGST---------------------- 389 (995)
T ss_dssp SCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEEE--E-EECCSS----------------------
T ss_pred CCCHHHHHHCCCEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCE--E-ECCCCC----------------------
T ss_conf 134155550383399765888766585699999834755676554302--5-404777----------------------
Q ss_pred CCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEECCCEEEE
Q ss_conf 87767455541378899991899999999822041163003899817884079519999999998498999554984699
Q 001824 298 GFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFEFYQRTQTSISL 377 (1009)
Q Consensus 298 ~~~f~~~~l~~~~~~~~~~~~~~~~~~~~lalC~tv~~~~~~~~~~~~y~~~spdE~Alv~~a~~~g~~~~~r~~~~i~i 377 (1009)
++...+...++........+.++.++.++++||++.++.++..+. ....++|+|.|++.+|++.|+ +.. ....+..
T Consensus 390 -~~p~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~-~~~~g~p~E~Al~~~a~~~g~-~~~-~~~~i~~ 465 (995)
T 3ar4_A 390 -YAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGV-YEKVGEATETALTTLVEKMNV-FNT-EVRNLSK 465 (995)
T ss_dssp -SSSCCCEEETTEECCGGGCHHHHHHHHHHHHSCCCEEEEETTTTE-EEEESCHHHHHHHHHHHHHCT-TCC-CCTTSCT
T ss_pred -CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC-EEECCCCCHHHHHHHHHHCCC-CCC-CCCCCCC
T ss_conf -688631013664344445589999999998748880565688983-255479647999999998399-641-0001342
Q ss_pred EECCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEECCCC-----CEEEEEECCCHHHHHHHHCC---------CCCCHHH
Q ss_conf 955888775302798896740799998559999983899-----29999915703645764117---------9430899
Q 001824 378 HELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEG-----KILLLCKGADSVMFDRLAKN---------GRDFEVE 443 (1009)
Q Consensus 378 ~~~~~~~~~~~~~~y~il~~~~F~s~rkrmsviv~~~~g-----~~~l~~KGa~~~i~~~~~~~---------~~~~~~~ 443 (1009)
.+.........+..|++++.+||+|+||||||+++.++| ++.+|+||||+.|+++|... +++.++.
T Consensus 466 ~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~ 545 (995)
T 3ar4_A 466 VERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEK 545 (995)
T ss_dssp TTSTTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHH
T ss_pred CCCCCCCHHHHHHHCCEEEEEECCCCCCEEEEEEECCCCCCCCCCEEEEECCCHHHHHHHCCHHHCCCCCCCCCHHHHHH
T ss_conf 01012101556641745777404888875699983489876664449997588799998540544289732499999999
Q ss_pred HHHHHHHH--HHCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHCHHCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCH
Q ss_conf 99999999--8634569999999279989999999999973110021999899989810028089887520244567908
Q 001824 444 TRDHVNKY--ADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVP 521 (1009)
Q Consensus 444 ~~~~l~~~--a~~GlRtL~~a~r~l~~~e~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lq~~v~ 521 (1009)
+.++++++ +.+|+|||++|||+++..+ +...+ .+ ...++.+|+|++++|+++++|++|++++
T Consensus 546 ~~~~~~~~~~a~~GlRvLa~A~k~~~~~~----------~~~~~-~~-----~~~~~~~e~~l~~lG~~~i~D~lr~~~~ 609 (995)
T 3ar4_A 546 ILSVIKEWGTGRDTLRCLALATRDTPPKR----------EEMVL-DD-----SSRFMEYETDLTFVGVVGMLDPPRKEVM 609 (995)
T ss_dssp HHHHHHHHHHSTTCCEEEEEEEESSCCCG----------GGCCT-TC-----GGGHHHHTCSEEEEEEEEEECCBCTTHH
T ss_pred HHHHHHHHHHHHCCCEEEEEEEEECCCCC----------CCCCC-CC-----CHHHHHHCCCCEEEEEEEECCCCCHHHH
T ss_conf 99999987763056148899998347651----------11222-34-----0244553069489999852588966699
Q ss_pred HHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999987299599993898878999998858546896189990577356775322027999999887678875321100
Q 001824 522 DCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQ 601 (1009)
Q Consensus 522 e~I~~L~~aGIkiwilTGD~~~tA~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (1009)
++|+.|+++||++||+|||+.+||.++|+++||...+... .
T Consensus 610 ~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~~~~~~i-----~---------------------------------- 650 (995)
T 3ar4_A 610 GSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEV-----A---------------------------------- 650 (995)
T ss_dssp HHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSSCTTCCC-----T----------------------------------
T ss_pred HHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCC-----C----------------------------------
T ss_conf 9999999869989998999789999999983967788753-----5----------------------------------
Q ss_pred CCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHH
Q ss_conf 00159999873899917200376037889999999621681199708923199999998716898699972895682333
Q 001824 602 LSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGML 681 (1009)
Q Consensus 602 ~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~vlaiGDG~NDv~ml 681 (1009)
..+++|+.+....++++.+. .. +..+|||++|+||+.+|+.+|+ .|+.|+|+|||.||++||
T Consensus 651 -----------~~~~~g~~~~~l~~~~~~~~----~~--~~~v~~r~~P~~K~~~v~~l~~-~g~~v~~~GDG~ND~~al 712 (995)
T 3ar4_A 651 -----------DRAYTGREFDDLPLAEQREA----CR--RACCFARVEPSHKSKIVEYLQS-YDEITAMTGDGVNDAPAL 712 (995)
T ss_dssp -----------TTEEEHHHHHTSCHHHHHHH----HH--HCCEEESCCSSHHHHHHHHHHT-TTCCEEEEECSGGGHHHH
T ss_pred -----------CEEEECHHHHHCCHHHHHHH----HH--HCCEEEEECHHHHHHHHHHHHH-CCCEEEEECCCCHHHHHH
T ss_conf -----------34898366462899999998----75--3738997089999999999997-799799983881449999
Q ss_pred HCCCEEEEECCCCCCCCCCCCCEECCC--HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 207721895157653101146440022--533788753313110311002478888889999999999997613777433
Q 001824 682 QEADIGIGISGVEGMQAVMSSDIAIAQ--FRYLERLLLVHGHWCYRRISSMICYFFYKNITFGLSVFLYEAYTTFSGQPA 759 (1009)
Q Consensus 682 ~~AdVGI~i~g~e~~qa~~asD~~i~~--f~~l~~lll~~Gr~~~~r~~~~i~~~~~kni~~~~~~~~~~~~~~fsg~~~ 759 (1009)
++|||||+| |+....|+++||+++.+ |..+.++ +.|||++|+|+++++.|.+++|+..+++.+++.++.. ..+
T Consensus 713 k~Advgiam-g~g~~~ak~aAd~vl~~~~~~~i~~~-i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~~g~---~~p 787 (995)
T 3ar4_A 713 KKAEIGIAM-GSGTAVAKTASEMVLADDNFSTIVAA-VEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGL---PEA 787 (995)
T ss_dssp HHSTEEEEE-TTSCHHHHHTCSEEETTCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC---CCS
T ss_pred HHCCEEEEE-CCCCHHHHHHCCEEECCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCH
T ss_conf 878967996-78899999738899777877899999-9998999999999999999999999999999999847---625
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH--CC
Q ss_conf 2579999999998769999987347778846651045120034445434200257867778999999999987620--25
Q 001824 760 YNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNVLFSWRRIFGWMFNGLYSAIIIFFFCKKAM--EH 837 (1009)
Q Consensus 760 ~~~~~l~~~n~~~t~lp~i~~~~~d~d~~~~~~~~~P~lY~~~~~~~~~~~~~~~~~~~~~~~~s~vif~~~~~~~--~~ 837 (1009)
+.++|++|+|++++.+|++++|+++. +++.+.++|+ .++..++++++++.|++.|+++++++++.+.+.+ ..
T Consensus 788 l~~~qil~~nl~~d~~p~l~l~~~~~--~~~~m~~~P~----~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 861 (995)
T 3ar4_A 788 LIPVQLLWVNLVTDGLPATALGFNPP--DLDIMDRPPR----SPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAE 861 (995)
T ss_dssp SCHHHHHHHHHTTTHHHHHHHTTCCC--CTTGGGSCCC----CTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCC--CHHHHHCCCC----CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 78999999999998877776306777--7568737999----97645448999999999999999999999999998515
Q ss_pred CC--CC-----------CCCCCC-----C---CHHHHHHHHHHHHHHHHHHHHHHHHH-----H--HHHHHHHHHHHHHH
Q ss_conf 54--46-----------999533-----4---11455789999999999999997521-----0--15888999998999
Q 001824 838 QA--FN-----------DDGKTV-----G---RDIFGATMYTCIVWVVNLQLALAISY-----F--TLIQHIFIWGSIAL 889 (1009)
Q Consensus 838 ~~--~~-----------~~g~~~-----~---~~~~~~~~~t~~v~~~~~~~~~~~~~-----~--~~~~~~~i~~si~~ 889 (1009)
.. .. .++... + .....|++|+++++...++.. .+++ | ..+.+..++.++++
T Consensus 862 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~-~~r~~~~~~~~~~~~~n~~l~~~~~~ 940 (995)
T 3ar4_A 862 DGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNAL-NSLSENQSLMRMPPWVNIWLLGSICL 940 (995)
T ss_dssp SSCCCTTCCGGGCSSCSSCCSCCSCSCCCGGGCHHHHHHHHHHHHHHHHHHHH-TTSCSSCCTTTSCGGGCHHHHHHHHH
T ss_pred CCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH-HHHCCCCCHHCCCCCCCHHHHHHHHH
T ss_conf 66543300000112234443333433221001013565999999999999999-86025543100577547999999999
Q ss_pred HHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999830287887405899999862785888999999999789999999999851
Q 001824 890 WYLFMLAYGAITPTHSTNAYKVFIEALAPAPLFWLVTLFVVISTLIPYFAYSAIQMRF 947 (1009)
Q Consensus 890 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~wl~~l~~~~~~llp~~~~k~~~r~~ 947 (1009)
.++++++..++|. ...+|...+.++.+|+.++++.++.++++.+.|++.|.|
T Consensus 941 ~~~l~~~~~~~p~------~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~r~~ 992 (995)
T 3ar4_A 941 SMSLHFLILYVDP------LPMIFKLKALDLTQWLMVLKISLPVIGLDEILKFIARNY 992 (995)
T ss_dssp HHHHHHHHHHSTH------HHHHTTCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHH------HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9999999998887------777611578999999999999999999999999994117
No 2
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A
Probab=1.00 E-value=1 Score=791.36 Aligned_cols=740 Identities=19% Similarity=0.217 Sum_probs=548.4
Q ss_pred CCCEEEEE-EEEC-----CCCCCC------------CCCCEEECCEEEECCCEEEEEEEEECCCCHH---HHCCCCCCCC
Q ss_conf 96037999-9976-----930247------------9996687030880489499999984572001---1027999998
Q 001824 42 NLYSFVGS-LIFE-----EQQHPL------------TPQQLLLRDSKLRNTDYIYGAVVFTGHDTKV---IQNSTDPPSK 100 (1009)
Q Consensus 42 ~l~~F~G~-~~~~-----~~~~~l------------~~~n~llrGs~l~nt~~~~gvVv~tG~~Tki---~~n~~~~~~k 100 (1009)
|.--.+|. +.+| ||+.|+ +..|++++||.+.+ |++.|+|++||++|++ +++...++.+
T Consensus 207 D~~ll~g~~~~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~v~~GT~v~~-G~~~~~V~~tG~~T~~g~i~~~~~~~~~~ 285 (1028)
T 2zxe_A 207 DLRIISAHGCKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVE-GTARGVVVYTGDRTVMGRIATLASGLEVG 285 (1028)
T ss_dssp EEEEEEEEEEEEECHHHHSCCSCEECCSSCCCSSTTTCSSEECTTCEEEE-EEEEEEEEECGGGSHHHHHHHHHHHSCCC
T ss_pred EEEEEEECCEEEECCCCCCCCCCEECCCCCCCCCCCCCCCEEEECCEEEC-CEEEEEEEEECCCCHHHHHHHHCCCCCCC
T ss_conf 28999608589986756788763443467788884453354873746970-16999999845143988999860378878
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf 69698999899999999999999999998764202236773223334478999854589991468899999999986213
Q 001824 101 RSRIERKMDQIIYFMFFVVFTVAFVGSIFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYL 180 (1009)
Q Consensus 101 ~s~le~~~n~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~ 180 (1009)
++++++.+|+++.+++.+.+++|++.+++. +|... .|+ ..+..++.+++.+
T Consensus 286 ~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~~--------~~~--------------------~~~~~~i~llv~~ 336 (1028)
T 2zxe_A 286 RTPIAIEIEHFIHIITGVAVFLGVSFFILS-LILGY--------SWL--------------------EAVIFLIGIIVAN 336 (1028)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHTTC--------CHH--------------------HHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCC--------CHH--------------------HHHHHHHHHHHHH
T ss_conf 892899999999999999999999999999-97367--------699--------------------9999999999997
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEECCEECCCC
Q ss_conf 24400245899999989776225222333369883015742000124615999748897411315999999938432788
Q 001824 181 IPISLYVSIEIVKVLQSIFINQDVQMYYEEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRG 260 (1009)
Q Consensus 181 iP~sL~v~i~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~ 260 (1009)
||++|+++++++..+++.++ +++++++|+++.+|+||+|++||||||||||+|+|++.++++++..|...
T Consensus 337 iP~~Lp~~vti~l~~~~~~m----------ak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~ 406 (1028)
T 2zxe_A 337 VPEGLLATVTVCLTLTAKRM----------ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEAD 406 (1028)
T ss_dssp SCTTHHHHHHHHHHHHHHHH----------HTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECC
T ss_pred CCCHHHHHHHHHHHHHHHHH----------HHCCCEECCCHHHHHHCCCEEEECCCCCCCCCCEEEEEEEEECCEEEECC
T ss_conf 47417999999999999998----------55891644456766414762995168888887738999999898465136
Q ss_pred CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 04899986430698863334688875433369998888776745554137889999189999999982204116300389
Q 001824 261 VTEVERAMNRKKGSPLIDVVNGLNTEEDLTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDEN 340 (1009)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~lalC~tv~~~~~~~ 340 (1009)
..+ . ..+..+ +..+...+.+++++++||++.++.+.+
T Consensus 407 ~~~------------~-------------------~~~~~~------------~~~~~~~~~l~~~~alc~~~~~~~~~~ 443 (1028)
T 2zxe_A 407 TTE------------N-------------------QSGAAF------------DKTSATWSALSRIAALCNRAVFQAGQD 443 (1028)
T ss_dssp CCT------------T-------------------CCSCCC------------CSSCHHHHHHHHHHHHSCCCEECTTCT
T ss_pred CCC------------C-------------------CCCCCC------------CCCCHHHHHHHHHHHHCCCCEEECCCC
T ss_conf 777------------7-------------------655444------------667789999999998657876504777
Q ss_pred CC--CEEEEECCHHHHHHHHHHHHCCCEEEEECCCEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEECC---C
Q ss_conf 98--178840795199999999984989995549846999558887753027988967407999985599999838---9
Q 001824 341 TG--KVMYEAESPDEAAFVIAARELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDE---E 415 (1009)
Q Consensus 341 ~~--~~~y~~~spdE~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~y~il~~~~F~s~rkrmsviv~~~---~ 415 (1009)
.. ...+..++|+|.|++++|+..|... ...+..|+++..+||||.|||||++++.+ +
T Consensus 444 ~hp~~~~~~~gdp~E~Al~~~a~~~~~~~------------------~~~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~ 505 (1028)
T 2zxe_A 444 NVPILKRSVAGDASESALLKCIELCCGSV------------------QGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSE 505 (1028)
T ss_dssp TSCGGGSCEESCHHHHHHHHHHHHHHSCH------------------HHHHHHSCEEEEECCCTTTCEEEEEEECSCTTT
T ss_pred CCCCCCCEECCCCHHHHHHHHHHHHCCCH------------------HHHHHHCCEEEEECCCCCCCEEEEEEECCCCCC
T ss_conf 77664530078940999999999958988------------------898874826787044766664799994057888
Q ss_pred CCEEEEEECCCHHHHHHHHCC---------CCCCHHHHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHCH
Q ss_conf 929999915703645764117---------94308999999999986345699999992799899999999999731100
Q 001824 416 GKILLLCKGADSVMFDRLAKN---------GRDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVS 486 (1009)
Q Consensus 416 g~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~a~~GlRtL~~a~r~l~~~e~~~~~~~~~~a~~~~~ 486 (1009)
+++++|+||||+.|+++|... +++.++.+.+++++++.+|+|+|++|+|+++++++.++. .
T Consensus 506 ~~~~~~~KGA~e~il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~--------~-- 575 (1028)
T 2zxe_A 506 SRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGY--------P-- 575 (1028)
T ss_dssp CCEEEEEEECHHHHHTTEEEECBTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTC--------C--
T ss_pred CCEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCC--------C--
T ss_conf 717999938828999874565338972128889999999999999855997999998746822134201--------2--
Q ss_pred HCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEEEC
Q ss_conf 21999899989810028089887520244567908999999872995999938988789999988585468961899905
Q 001824 487 ADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINL 566 (1009)
Q Consensus 487 ~~r~~~~~~~~~~iE~dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkiwilTGD~~~tA~~ia~~~gl~~~~~~~~~i~~ 566 (1009)
.+++ ..+.+|+|++|+|+++++||+||+++++|+.|+++||++||+|||+.+||.+||++|||..++...+
T Consensus 576 ~~~~-----~~~~~e~~l~~lG~i~i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i---- 646 (1028)
T 2zxe_A 576 FDAD-----EPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETI---- 646 (1028)
T ss_dssp CCTT-----TTCSCCSSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCH----
T ss_pred CCHH-----HHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCHHH----
T ss_conf 4624-----5555543809986511578998448999999998699799988997799999999869887883367----
Q ss_pred CCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 77356775322027999999887678875321100001599998738999172003760378899999996216811997
Q 001824 567 ETPEILALEKTGAKSEITKASKESVLHQINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICC 646 (1009)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~ 646 (1009)
. + .... ... ..... ........+++|..+....+++ +..+...++.++||
T Consensus 647 ---~--~---------~~~~--~~~------~~~~~----~~~~~~~~vi~G~~l~~~~~~~----l~~~~~~~~~~v~a 696 (1028)
T 2zxe_A 647 ---E--D---------IAAR--LNI------PIGQV----NPRDAKACVVHGSDLKDLSTEV----LDDILHYHTEIVFA 696 (1028)
T ss_dssp ---H--H---------HHHH--TTC------CGGGS----CGGGCCEEEEEHHHHTTCCHHH----HHHHHHHCSEEEEE
T ss_pred ---H--H---------HHHH--CCC------CHHHC----CCCCCCEEEEECHHHHHCCHHH----HHHHHHHCCCEEEE
T ss_conf ---7--7---------7764--186------32221----5556626998808856479999----99998627967999
Q ss_pred ECCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHCCCEEEEECCCCCCCCCCCCCEECCC--HHHHHHHHHHCCCHHH
Q ss_conf 08923199999998716898699972895682333207721895157653101146440022--5337887533131103
Q 001824 647 RSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQ--FRYLERLLLVHGHWCY 724 (1009)
Q Consensus 647 r~sP~qK~~iV~~lk~~~~~~vlaiGDG~NDv~ml~~AdVGI~i~g~e~~qa~~asD~~i~~--f~~l~~lll~~Gr~~~ 724 (1009)
|++|+||..+|+.+|+ .|++|+|+|||.||++||++|||||+|..+....|+++||+++.+ |..+.++ +.|||++|
T Consensus 697 r~~P~~K~~iV~~lq~-~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~ak~aAD~Vl~~~~~~~I~~~-i~~gR~i~ 774 (1028)
T 2zxe_A 697 RTSPQQKLIIVEGCQR-QGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMILLDDNFASIVTG-VEEGRLIF 774 (1028)
T ss_dssp SCCHHHHHHHHHHHHH-TTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHHHHHHCSEEETTCCTHHHHHH-HHHHHHHH
T ss_pred ECCHHHHHHHHHHHHH-CCCEEEEECCCCCHHHHHHHCCCEEEECCCCCHHHHHHCCEEECCCCHHHHHHH-HHHHHHHH
T ss_conf 8588899999999996-899899985885339999868911996776588899854899557987799999-99999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCC
Q ss_conf 11002478888889999999999997613777433257999999999876999998734777884665104512003444
Q 001824 725 RRISSMICYFFYKNITFGLSVFLYEAYTTFSGQPAYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQ 804 (1009)
Q Consensus 725 ~r~~~~i~~~~~kni~~~~~~~~~~~~~~fsg~~~~~~~~l~~~n~~~t~lp~i~~~~~d~d~~~~~~~~~P~lY~~~~~ 804 (1009)
.|+++++.|.+++|+..+++.+++.++.. ..++.+++++|+|++++.+|.++++.. + +.++.+.+.|+ ....
T Consensus 775 ~ni~k~i~~~l~~n~~~~~~~~~~~~~~~---~~~l~~~qil~inl~~d~~pa~al~~e-~-~~~~~m~~~Pr---~~~~ 846 (1028)
T 2zxe_A 775 DNLKKSIAYTLTSNIPEITPFLVFIIGNV---PLPLGTVTILCIDLGTDMVPAISLAYE-Q-AESDIMKRQPR---NPKT 846 (1028)
T ss_dssp HHHHHHHHHHHHTTHHHHHHHHHHHHHCC---CCSSCHHHHHHHHTTTTHHHHHHGGGC-C-CSSCGGGSCCC---CTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHHHHHCCC-C-CCHHHHCCCCC---CCCC
T ss_conf 99999999999999999999999999766---644579999999999999999986028-6-61456515999---9521
Q ss_pred CCCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHCCCCC-------------CC--------CCCCCC-------CHHHHHH
Q ss_conf 54342002578-6777899999999998762025544-------------69--------995334-------1145578
Q 001824 805 NVLFSWRRIFG-WMFNGLYSAIIIFFFCKKAMEHQAF-------------ND--------DGKTVG-------RDIFGAT 855 (1009)
Q Consensus 805 ~~~~~~~~~~~-~~~~~~~~s~vif~~~~~~~~~~~~-------------~~--------~g~~~~-------~~~~~~~ 855 (1009)
+.++++++++. |+..|++++++.|+.+++.+....+ .. .|.... .....|+
T Consensus 847 ~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~ 926 (1028)
T 2zxe_A 847 DKLVNERLISMAYGQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQQWTYEQRKIVEFTCHTS 926 (1028)
T ss_dssp CCSSCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHTTCCHHHHTTCHHHHSCTTCCCEECTTSCEECHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 34527999999999999999999999999987406766201310220010356542113455322234444566678899
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHH----HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHH
Q ss_conf 9999999999999997-521015----88899999899999999998302878874058999998627858889999999
Q 001824 856 MYTCIVWVVNLQLALA-ISYFTL----IQHIFIWGSIALWYLFMLAYGAITPTHSTNAYKVFIEALAPAPLFWLVTLFVV 930 (1009)
Q Consensus 856 ~~t~~v~~~~~~~~~~-~~~~~~----~~~~~i~~si~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~wl~~l~~~ 930 (1009)
+|+++++.+.+..... +...++ +.+..++.++++.++++++..++|. +. .+|...+.++..|+.++.+.
T Consensus 927 ~f~~~v~~q~~~~~~~r~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~-~~-----~~f~~~~l~~~~w~~~~~~~ 1000 (1028)
T 2zxe_A 927 FFISIVVVQWADLIICKTRRNSIFQQGMKNKILIFGLFEETALAAFLSYCPG-TD-----VALRMYPLKPSWWFCAFPYS 1000 (1028)
T ss_dssp HHHHHHHHHHHHHHHTTCSSSCHHHHCSCCHHHHHHHHHHHHHHHHHHHSTT-HH-----HHTCCCCCCGGGGGTTHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH-HH-----HHHCCCCCCHHHHHHHHHHH
T ss_conf 9999999999999987468751101577688999999999999999998656-77-----64218889999999999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q ss_conf 99789999999999851
Q 001824 931 ISTLIPYFAYSAIQMRF 947 (1009)
Q Consensus 931 ~~~llp~~~~k~~~r~~ 947 (1009)
+..++.+.+.|++.|.+
T Consensus 1001 ~~~~~~~e~~k~~~r~~ 1017 (1028)
T 2zxe_A 1001 LIIFLYDEMRRFIIRRS 1017 (1028)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHCC
T ss_conf 99999999999998706
No 3
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A
Probab=1.00 E-value=1 Score=784.74 Aligned_cols=730 Identities=17% Similarity=0.170 Sum_probs=552.9
Q ss_pred ECCCCCCC------------CCCCEEECCEEEECCCEEEEEEEEECCCC---HHHHCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 76930247------------99966870308804894999999845720---0110279999986969899989999999
Q 001824 52 FEEQQHPL------------TPQQLLLRDSKLRNTDYIYGAVVFTGHDT---KVIQNSTDPPSKRSRIERKMDQIIYFMF 116 (1009)
Q Consensus 52 ~~~~~~~l------------~~~n~llrGs~l~nt~~~~gvVv~tG~~T---ki~~n~~~~~~k~s~le~~~n~~~~~~~ 116 (1009)
++||+.|+ +..|++++||.+.+ |.+.|+|++||.+| |++++...++.+++++++.+++++..+.
T Consensus 228 LTGES~pv~K~~~~~~~~~~~~~n~~f~GT~v~~-G~~~~vVv~tG~~T~~GkI~~~~~~~~~~~tpl~~~~~~~~~~l~ 306 (1034)
T 3ixz_A 228 LTGESEPQTRSPECTHESPLETRNIAFFSTMCLE-GTAQGLVVNTGDRTIIGRIASLASGVENEKTPIAIEIEHFVDIIA 306 (1034)
T ss_pred CCCCCCCEECCCCCCCCCCCCCCCCEECCEEEEE-ECCEEEEEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 6788777665577766563234451220406986-042499996025437408998620356678918999999999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
Q ss_conf 99999999999987642022367732233344789998545899914688999999999862132440024589999998
Q 001824 117 FVVFTVAFVGSIFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYLIPISLYVSIEIVKVLQ 196 (1009)
Q Consensus 117 ~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~i~~~~~~~ 196 (1009)
.+.++++++.+++..++.. . ....+..++.+++.+||++|+++++++..++
T Consensus 307 ~~~~~~~~~~~~~~~~~~~---------~--------------------~~~~~~~~i~l~v~~iPe~Lp~~vti~la~~ 357 (1034)
T 3ixz_A 307 GLAILFGATFFIVAMCIGY---------T--------------------FLRAMVFFMAIVVAYVPEGLLATVTVCLSLT 357 (1034)
T ss_pred HHHHHHHHHHHHHHHHHCC---------H--------------------HHHHHHHHHHHHHHEECCCCHHHHHHHHHHH
T ss_conf 9999999999999999641---------2--------------------9999999999988202665089999999999
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEECCEECCCCCHHHHHHHHHHCCCCC
Q ss_conf 97762252223333698830157420001246159997488974113159999999384327880489998643069886
Q 001824 197 SIFINQDVQMYYEEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPL 276 (1009)
Q Consensus 197 ~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~ 276 (1009)
+.++ +++++++|+++.+|+||++++||||||||||+|+|++.++++++..|.....+. .
T Consensus 358 ~~rm----------ak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~----------~- 416 (1034)
T 3ixz_A 358 AKRL----------ASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTED----------Q- 416 (1034)
T ss_pred HHHH----------HHCCEEECCHHHHHHHCCCCEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCC----------C-
T ss_conf 9987----------338828647678886158729972897872368379999997795122567666----------5-
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCC--CCEEEEECCHHHH
Q ss_conf 33346888754333699988887767455541378899991899999999822041163003899--8178840795199
Q 001824 277 IDVVNGLNTEEDLTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENT--GKVMYEAESPDEA 354 (1009)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~lalC~tv~~~~~~~~--~~~~y~~~spdE~ 354 (1009)
.+. ..++.....+.+++++++||++....+.+. ....+..++|.|.
T Consensus 417 --------------------~~~------------~~~~~~~~~~~l~~~~~lc~~a~~~~~~~~~~~~~~~~~gdp~e~ 464 (1034)
T 3ixz_A 417 --------------------SGQ------------TFDQSSETWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASET 464 (1034)
T ss_pred --------------------CCC------------CCCCCCHHHHHHHHHHHHHCCCEECCCCCCCCCCCCEECCCCHHH
T ss_conf --------------------665------------567677899999999887162665357677766574355492599
Q ss_pred HHHHHHHHCCCEEEEECCCEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEECC---CCCEEEEEECCCHHHHH
Q ss_conf 999999984989995549846999558887753027988967407999985599999838---99299999157036457
Q 001824 355 AFVIAARELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDE---EGKILLLCKGADSVMFD 431 (1009)
Q Consensus 355 Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~y~il~~~~F~s~rkrmsviv~~~---~g~~~l~~KGa~~~i~~ 431 (1009)
|++.++...|..... .+..|+++..+||+|+||||+++++.+ ++++.+|+||||+.|++
T Consensus 465 All~~~~~~~~~~~~------------------~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~~~l~~KGApe~il~ 526 (1034)
T 3ixz_A 465 ALLKFSELTLGNAMG------------------YRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLE 526 (1034)
T ss_pred HHHHHHHHHCCCHHH------------------HHHHCCCEEEEEECCCCCEEEEEEEECCCCCCCEEEEEECCHHHHHH
T ss_conf 999999985788688------------------89748606995035777268999983378886089999688499999
Q ss_pred HHHCC---------CCCCHHHHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHCHHCHHHHHHHHHHHHHC
Q ss_conf 64117---------943089999999999863456999999927998999999999997311002199989998981002
Q 001824 432 RLAKN---------GRDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEK 502 (1009)
Q Consensus 432 ~~~~~---------~~~~~~~~~~~l~~~a~~GlRtL~~a~r~l~~~e~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~ 502 (1009)
+|+.. .++.++.+.+.+++++.+|+|+|++|+|.++++++..+... +. +..+.+|+
T Consensus 527 ~c~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~----------~~-----~~~~~~e~ 591 (1034)
T 3ixz_A 527 RCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAF----------DV-----EAMNFPTS 591 (1034)
T ss_pred HHHHHHCCCCEECCCHHHHHHHHHHHHHHHHCCCHHHEEEEEECCHHHCCCCCCC----------CH-----HHHHCCCC
T ss_conf 7377552896401999999999999999871475823686785580004321124----------53-----44302224
Q ss_pred CCEEEEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHCHHHH
Q ss_conf 80898875202445679089999998729959999389887899999885854689618999057735677532202799
Q 001824 503 DLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSE 582 (1009)
Q Consensus 503 dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkiwilTGD~~~tA~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 582 (1009)
|++|+|+++++||+|++++++|+.|+++||++||+|||+.+||.++|+++|+..++... ..
T Consensus 592 ~l~~lGlv~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~---------i~---------- 652 (1034)
T 3ixz_A 592 GLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSET---------VE---------- 652 (1034)
T ss_pred CCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCCCCCHH---------HH----------
T ss_conf 86798887136887065999999999869969999699779999999986999887247---------88----------
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHC
Q ss_conf 99998876788753211000015999987389991720037603788999999962168119970892319999999871
Q 001824 583 ITKASKESVLHQINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKS 662 (1009)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~ 662 (1009)
+.. .+....... .........+++|..+....+++ +......++.++|||++|+||..+|+.+|+
T Consensus 653 --~~~-----~~~~~~~~~----~~~~~~~~~~~~g~~l~~~~~~~----l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~ 717 (1034)
T 3ixz_A 653 --DIA-----ARLRVPVDQ----VNRKDARACVINGMQLKDMDPSE----LVEALRTHPEMVFARTSPQQKLVIVESCQR 717 (1034)
T ss_pred --HHH-----HHHCCCCHH----CCCCCCCEEEEECHHHHHCCHHH----HHHHHHHCCCEEEEECCHHHHHHHHHHHHH
T ss_conf --888-----761765000----25445431677167666389999----999987378269996698999999999997
Q ss_pred CCCCEEEEECCCCCCHHHHHCCCEEEEECCCCCCCCCCCCCEECCCHHH--HHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 6898699972895682333207721895157653101146440022533--78875331311031100247888888999
Q 001824 663 GTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRY--LERLLLVHGHWCYRRISSMICYFFYKNIT 740 (1009)
Q Consensus 663 ~~~~~vlaiGDG~NDv~ml~~AdVGI~i~g~e~~qa~~asD~~i~~f~~--l~~lll~~Gr~~~~r~~~~i~~~~~kni~ 740 (1009)
.|.+|+|+|||.||++||+.||+||+|.++....|+++||+++.++++ +..+ +.|||++|.|+++++.|.+++|+.
T Consensus 718 -~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aAD~Vl~~~~~~gI~~a-i~~GR~i~~ni~k~i~~~l~~ni~ 795 (1034)
T 3ixz_A 718 -LGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMILLDDNFASIVTG-VEQGRLIFDNLKKSIAYTLTKNIP 795 (1034)
T ss_pred -CCCEEEEECCCHHHHHHHHHCCEEEEECCCCCHHHHHHCCEEECCCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf -699999987957769999978932980775679999854999666883399999-999889999999999999999999
Q ss_pred HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCC-CCCCCCHHHHHH-HHH
Q ss_conf 999999999761377743325799999999987699999873477788466510451200344-454342002578-677
Q 001824 741 FGLSVFLYEAYTTFSGQPAYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGV-QNVLFSWRRIFG-WMF 818 (1009)
Q Consensus 741 ~~~~~~~~~~~~~fsg~~~~~~~~l~~~n~~~t~lp~i~~~~~d~d~~~~~~~~~P~lY~~~~-~~~~~~~~~~~~-~~~ 818 (1009)
.+++.+++.++. ...++.+++++|.|++++.+|.++++.++ ++++.+.+.|+ .+ +..++++++++. ++.
T Consensus 796 ~~~~~~~~~~~~---~~~pl~~~qiL~inl~~d~~palal~~e~--~~~~~m~~~Pr----~~~~~~l~~~~~~~~~~~~ 866 (1034)
T 3ixz_A 796 ELTPYLIYITVS---VPLPLGCITILFIELCTDIFPSVSLAYEK--AESDIMHLRPR----NPKRDRLVNEPLAAYSYFQ 866 (1034)
T ss_pred HHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHCCC--CCHHHHHCCCC----CCCCCCCCCHHHHHHHHHH
T ss_conf 999999999982---14668999999999998888888851688--97326647998----9753445578899999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCC-----------C----------CCC-------CCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 789999999999876202554469-----------9----------953-------341145578999999999999999
Q 001824 819 NGLYSAIIIFFFCKKAMEHQAFND-----------D----------GKT-------VGRDIFGATMYTCIVWVVNLQLAL 870 (1009)
Q Consensus 819 ~~~~~s~vif~~~~~~~~~~~~~~-----------~----------g~~-------~~~~~~~~~~~t~~v~~~~~~~~~ 870 (1009)
.|++++++.|+.++..+...++.. + |.. .......|+.|+++++.+.+..+.
T Consensus 867 ~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~q~~~~~~ 946 (1034)
T 3ixz_A 867 IGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEWTFGQRLYQQYTCYTVFFISIEMCQIADVLI 946 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999636776200001112223344443101112111011100000257989999999999999983
Q ss_pred HHHH-----H--HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 7521-----0--15888999998999999999983028788740589999986278588899999999978999999999
Q 001824 871 AISY-----F--TLIQHIFIWGSIALWYLFMLAYGAITPTHSTNAYKVFIEALAPAPLFWLVTLFVVISTLIPYFAYSAI 943 (1009)
Q Consensus 871 ~~~~-----~--~~~~~~~i~~si~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~wl~~l~~~~~~llp~~~~k~~ 943 (1009)
+++ | .++.|..+|+++++.++++++..++|+ +.. +|...+.++.+|+.++.+.++.++.+.+.|++
T Consensus 947 -~r~~~~s~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~-~~~-----~f~~~~l~~~~w~~~~~~~~~~~~~~e~~K~~ 1019 (1034)
T 3ixz_A 947 -RKTRRLSAFQQGFFRNRILVIAIVFQVCIGCFLCYCPG-MPN-----IFNFMPIRFQWWLVPMPFGLLIFVYDEIRKLG 1019 (1034)
T ss_pred -HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-HHH-----HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf -12688765426775368999999999999999998266-777-----75678898999999999999999999999999
Q ss_pred HHHHCC
Q ss_conf 985199
Q 001824 944 QMRFFP 949 (1009)
Q Consensus 944 ~r~~~P 949 (1009)
.|.+-+
T Consensus 1020 ~r~~~~ 1025 (1034)
T 3ixz_A 1020 VRCCPG 1025 (1034)
T ss_pred HHHCCC
T ss_conf 974799
No 4
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=1.00 E-value=1 Score=678.10 Aligned_cols=637 Identities=16% Similarity=0.179 Sum_probs=459.2
Q ss_pred CCCCCCC--CCCCEEECCEEEECCCEEEEEEEEECCCCHHHHC---CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6930247--9996687030880489499999984572001102---7999998696989998999999999999999999
Q 001824 53 EEQQHPL--TPQQLLLRDSKLRNTDYIYGAVVFTGHDTKVIQN---STDPPSKRSRIERKMDQIIYFMFFVVFTVAFVGS 127 (1009)
Q Consensus 53 ~~~~~~l--~~~n~llrGs~l~nt~~~~gvVv~tG~~Tki~~n---~~~~~~k~s~le~~~n~~~~~~~~~~~~~~~i~~ 127 (1009)
+||+.|+ .++|.+++||.+.+ |.+.++|++||.+|++++. ...++.+++++++.++++..+++++.++++++.+
T Consensus 231 TGES~PV~K~~gd~v~sGT~v~~-G~~~~~V~~tG~~T~~g~I~~lv~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~~ 309 (920)
T 1mhs_A 231 TGESLAVDKHKGDQVFASSAVKR-GEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVW 309 (920)
T ss_dssp SSCCCCEECCSSCEECSCBCCSC-CCEEEEEEECSTTCSTTTTTSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEECCCCEEECCCEEEC-CEEEEEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 78886469347986303766951-35999999957767888998877642467764999999999999999999999999
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 98764202236773223334478999854589991468899999999986213244002458999999897762252223
Q 001824 128 IFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYLIPISLYVSIEIVKVLQSIFINQDVQMY 207 (1009)
Q Consensus 128 i~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~i~~~~~~~~~~i~~d~~m~ 207 (1009)
+. | ||.. ......+..++.+++.+||++|+++++++...++.++
T Consensus 310 ~~---~------------~~~~--------------~~~~~~l~~av~llV~aiP~aLp~~vti~la~g~~~m------- 353 (920)
T 1mhs_A 310 VS---S------------FYRS--------------NPIVQILEFTLAITIIGVPVGLPAVVTTTMAVGAAYL------- 353 (920)
T ss_dssp HT---T------------TTTT--------------CCHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHH-------
T ss_pred HH---H------------HHCC--------------CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH-------
T ss_conf 99---8------------8468--------------8699999999999987676037777899999999999-------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEECCEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 33369883015742000124615999748897411315999999938432788048999864306988633346888754
Q 001824 208 YEEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEE 287 (1009)
Q Consensus 208 ~~~~~~~~~~r~~~~~E~LG~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (1009)
+++++++|+++.+|+||++++||||||||||+|+|++.+++..+..
T Consensus 354 ---ak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~g~------------------------------- 399 (920)
T 1mhs_A 354 ---AKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAGV------------------------------- 399 (920)
T ss_dssp ---HHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCCBCCSCC-------------------------------
T ss_pred ---HHCCEEEECCCHHHHHCCCCEEEECCCCCCCCCCEEEEEEEECCCC-------------------------------
T ss_conf ---8688387057135554367689977888755553169998506998-------------------------------
Q ss_pred CCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCHHHHHHHHHHHHCCCEE
Q ss_conf 33369998888776745554137889999189999999982204116300389981788407951999999999849899
Q 001824 288 DLTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFEF 367 (1009)
Q Consensus 288 ~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~lalC~tv~~~~~~~~~~~~y~~~spdE~Alv~~a~~~g~~~ 367 (1009)
++ .+++++.++|+... . .+.||.|.|++++++..+...
T Consensus 400 --------------------------~~-----~~ll~~a~l~~~~~----~-------~~~~P~e~Al~~~~~~~~~~~ 437 (920)
T 1mhs_A 400 --------------------------DP-----EDLMLTACLAASRK----K-------KGIDAIDKAFLKSLKYYPRAK 437 (920)
T ss_dssp --------------------------CC-----THHHHHHHHSCCCS----S-------CSCCSHHHHHHHHHHHSSSCC
T ss_pred --------------------------CH-----HHHHHHHHHHCCCC----C-------CCCCHHHHHHHHHHHHCCCCH
T ss_conf --------------------------98-----99999999854776----6-------689858999999999646310
Q ss_pred EEECCCEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCEEEEEECCCHHHHHHHHCC---CCCCHHHH
Q ss_conf 955498469995588877530279889674079999855999998389929999915703645764117---94308999
Q 001824 368 YQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKN---GRDFEVET 444 (1009)
Q Consensus 368 ~~r~~~~i~i~~~~~~~~~~~~~~y~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGa~~~i~~~~~~~---~~~~~~~~ 444 (1009)
.....|++++.+||+|.||||+++++.++|+.++|+|||++.|+++|... .++.++.+
T Consensus 438 -------------------~~~~~~~~~~~~pF~s~~k~ms~iv~~~~g~~~~~~KGape~il~~c~~~~~~~~~~~~~~ 498 (920)
T 1mhs_A 438 -------------------SVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVEEDHPIPEEVDQAY 498 (920)
T ss_dssp -------------------GGGSCCCEEEEEEEETTTTEEEEEECCSSSSCEEEEEECHHHHHHHCCCSSCCCHHHHHHH
T ss_pred -------------------HHCCCCCEEEEEECCCCCCEEEEEEEECCCCEEEEEECCHHHHHHHCCCCCCCCHHHHHHH
T ss_conf -------------------1013553357861167788599999967991899990879999986135678987889989
Q ss_pred HHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHCHHCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHH
Q ss_conf 99999998634569999999279989999999999973110021999899989810028089887520244567908999
Q 001824 445 RDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCI 524 (1009)
Q Consensus 445 ~~~l~~~a~~GlRtL~~a~r~l~~~e~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lq~~v~e~I 524 (1009)
.+++++++.+|+|+|++|+|.. |.+++++|+++++||+||+++++|
T Consensus 499 ~~~~~~~a~~G~RvL~vA~~~~----------------------------------e~~l~~lGli~i~Dp~R~ea~~aI 544 (920)
T 1mhs_A 499 KNKVAEFATRGFRSLGVARKRG----------------------------------EGSWEILGIMPCMDPPRHDTYKTV 544 (920)
T ss_dssp HHHHHHHHTSSCCCCEECCCSS----------------------------------SCSCCCCBBCCCCCCCCHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEEEECC----------------------------------CCCCEEEEEEEEECCCCCCHHHHH
T ss_conf 9999999867997999998326----------------------------------653078899997343210179999
Q ss_pred HHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 99987299599993898878999998858546896189990577356775322027999999887678875321100001
Q 001824 525 DKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQLSA 604 (1009)
Q Consensus 525 ~~L~~aGIkiwilTGD~~~tA~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 604 (1009)
+.|+++||++||+|||++.||.+||+++||..... +.+.
T Consensus 545 ~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~-----~~~~------------------------------------ 583 (920)
T 1mhs_A 545 CEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIY-----NAER------------------------------------ 583 (920)
T ss_dssp HHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCC-----CSSS------------------------------------
T ss_pred HHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCC-----CCCC------------------------------------
T ss_conf 99862574499983897899999999849996546-----7541------------------------------------
Q ss_pred CCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHCC
Q ss_conf 59999873899917200376037889999999621681199708923199999998716898699972895682333207
Q 001824 605 SGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEA 684 (1009)
Q Consensus 605 ~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~vlaiGDG~NDv~ml~~A 684 (1009)
++++|.. ...++++.+ .. .+..+|+|++|+||..+|+.+|+ .|+.|+|+|||.||+|||++|
T Consensus 584 ---------~~~~g~~--~~~~~el~~----~~--~~~~V~arv~P~~K~~iV~~Lq~-~g~~Vam~GDGvNDapaLk~A 645 (920)
T 1mhs_A 584 ---------LGLGGGG--DMPGSEVYD----FV--EAADGFAEVFPQHKYNVVEILQQ-RGYLVAMTGDGVNDAPSLKKA 645 (920)
T ss_dssp ---------SSSCBCC--CGGGGGGGT----TT--TTTSCEESCCSTHHHHHHHHHHT-TTCCCEECCCCGGGHHHHHHS
T ss_pred ---------EEECCCC--CCCHHHHHH----HH--HHCEEEEEECHHHHHHHHHHHHH-CCCEEEEECCCCCCHHHHHHC
T ss_conf ---------2422765--589899998----77--51819998379999999999996-799699982881009999857
Q ss_pred CEEEEECCCCCCCCCCCCCEECCC--HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
Q ss_conf 721895157653101146440022--533788753313110311002478888889999999999997613777433257
Q 001824 685 DIGIGISGVEGMQAVMSSDIAIAQ--FRYLERLLLVHGHWCYRRISSMICYFFYKNITFGLSVFLYEAYTTFSGQPAYND 762 (1009)
Q Consensus 685 dVGI~i~g~e~~qa~~asD~~i~~--f~~l~~lll~~Gr~~~~r~~~~i~~~~~kni~~~~~~~~~~~~~~fsg~~~~~~ 762 (1009)
||||+|+ .....|+++||+++.+ |..+..+ +.+||++|+|+++++.|.++.|+.+....+++..+.++ + +.+
T Consensus 646 dvGIAmg-~gtd~ak~aADiVl~~~~~~~I~~a-i~~gR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~---~-l~~ 719 (920)
T 1mhs_A 646 DTGIAVE-GSSDAARSAADIVFLAPGLGAIIDA-LKTSRQIFHRMYAYVVYRIALSIHLEIFLGLWIAILNR---S-LNI 719 (920)
T ss_dssp SEEEEET-TSCHHHHHSSSEEESSCCSHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSC---C-CCH
T ss_pred CCCCCCC-CCCHHHHHHCCEEECCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---C-CCH
T ss_conf 8674056-4339999846807767977789999-99999999999998788979999999999999999961---6-879
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 99999999987699999873477788466510451200344454342002578677789999999999876202554469
Q 001824 763 WFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNVLFSWRRIFGWMFNGLYSAIIIFFFCKKAMEHQAFND 842 (1009)
Q Consensus 763 ~~l~~~n~~~t~lp~i~~~~~d~d~~~~~~~~~P~lY~~~~~~~~~~~~~~~~~~~~~~~~s~vif~~~~~~~~~~~~~~ 842 (1009)
.+++|.|++.+. |++++++++.+.+ +.|+-.. ..+.++..+..|++.++..++.+...+... ..
T Consensus 720 ~~il~~~l~~d~-~~lal~~e~~~~~-----~~P~~~~--------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~ 783 (920)
T 1mhs_A 720 ELVVFIAIFADV-ATLAIAYDNAPYS-----QTPVKWN--------LPKLWGMSVLLGVVLAVGTWITVTTMYAQG--EN 783 (920)
T ss_dssp HHHHHHHHHHTT-HHHHCCCCCSGGG-----GSCCCCC--------SSSCSSCHHHHHHHHHHHHHHHHHHHTTTT--TT
T ss_pred HHHHHHHHHHHH-HHHHHCCCCCCCC-----CCCCCCH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CC
T ss_conf 999999999877-7665135676434-----5887840--------898999999999999999999999999835--45
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC
Q ss_conf 99533411455789999999999999997521----01588899999899999999998302878874058999998627
Q 001824 843 DGKTVGRDIFGATMYTCIVWVVNLQLALAISY----FTLIQHIFIWGSIALWYLFMLAYGAITPTHSTNAYKVFIEALAP 918 (1009)
Q Consensus 843 ~g~~~~~~~~~~~~~t~~v~~~~~~~~~~~~~----~~~~~~~~i~~si~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 918 (1009)
.+...+.....|++|+++++...+.++. +++ |....+..+++++++..++.....+++ . |...+.
T Consensus 784 ~~~~~~~~~~~T~~f~~lv~~~~~~~~~-~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---------f~~~~l 852 (920)
T 1mhs_A 784 GGIVQNFGNMDEVLFLQISLTENWLIFI-TRANGPFWSSIPSWQLSGAIFLVDILATCFTIWG-W---------FEHSDT 852 (920)
T ss_dssp CCSSSSSSSHHHHHHHHHHHHHHHHTTS-SSCSSSCSCCSCTHHHHHHHHHHHHHHHHHHSSS-S---------TTSCSH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHH-HCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH-H---------HCCCCC
T ss_conf 6533206678999999999999999998-5036054037559999999999999999999765-6---------316788
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 85888999999999789999999999851
Q 001824 919 APLFWLVTLFVVISTLIPYFAYSAIQMRF 947 (1009)
Q Consensus 919 s~~~wl~~l~~~~~~llp~~~~k~~~r~~ 947 (1009)
++..|+.++++.++.++...+.|++.+..
T Consensus 853 ~~~~~~~~~~~~~~~~~~~e~~k~~~~~~ 881 (920)
T 1mhs_A 853 SIVAVVRIWIFSFGIFCIMGGVYYILQDS 881 (920)
T ss_dssp HHHTHHHHHHHTTHHHHHHHHHHHCCCCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999998604
No 5
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}
Probab=1.00 E-value=1 Score=665.00 Aligned_cols=651 Identities=17% Similarity=0.193 Sum_probs=442.4
Q ss_pred ECCCCCCC--CCCCEEECCEEEECCCEEEEEEEEECCCCHHHHCCC--CCCCCCCHHHHHHHHHHHHHHH-HHHHHHHHH
Q ss_conf 76930247--999668703088048949999998457200110279--9999869698999899999999-999999999
Q 001824 52 FEEQQHPL--TPQQLLLRDSKLRNTDYIYGAVVFTGHDTKVIQNST--DPPSKRSRIERKMDQIIYFMFF-VVFTVAFVG 126 (1009)
Q Consensus 52 ~~~~~~~l--~~~n~llrGs~l~nt~~~~gvVv~tG~~Tki~~n~~--~~~~k~s~le~~~n~~~~~~~~-~~~~~~~i~ 126 (1009)
++||+.|+ .++|.+++||.+.+ |++.++|++||.+|.+.+... +...+++++++.++++..+++. +.+.++++.
T Consensus 181 LTGES~Pv~K~~g~~v~~GT~v~~-G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~lq~~~~~i~~~~~~~~~~~~~~~~ 259 (885)
T 3b8c_A 181 LTGESLPVTKHPGQEVFSGSTCKQ-GEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAIGMVIEI 259 (885)
T ss_dssp TTCCSSCCCBSSCCCCCSCCCCCS-CCCCCBCCSCTTTTTSTTCCCSCCSCSCCSTTTTTTHHHHHHHHHHHHHHHHHHS
T ss_pred CCCCCCCEEECCCCCCCCCEEEEE-EEEEEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 688886458348983026759951-1799999975730199999999864644684999999999999999999999999
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 99876420223677322333447899985458999146889999999998621324400245899999989776225222
Q 001824 127 SIFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYLIPISLYVSIEIVKVLQSIFINQDVQM 206 (1009)
Q Consensus 127 ~i~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~i~~~~~~~~~~i~~d~~m 206 (1009)
+ ..|.... ..|. ..+.+++.+++.+||++||++++++..+++.++
T Consensus 260 ~---~~~~~~~------~~~~--------------------~~~~~~v~llv~aiP~aLp~~vti~la~g~~r~------ 304 (885)
T 3b8c_A 260 I---VMYPIQR------RKYR--------------------DGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL------ 304 (885)
T ss_dssp T---TTTTTTC------SCST--------------------THHHHHHHHTTTTCCSSTTTHHHHTTTHHHHHH------
T ss_pred H---HHHHHCC------CCHH--------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------
T ss_conf 9---9999806------8699--------------------999999999999703689999999999999999------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEECCEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 33336988301574200012461599974889741131599999993843278804899986430698863334688875
Q 001824 207 YYEEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTE 286 (1009)
Q Consensus 207 ~~~~~~~~~~~r~~~~~E~LG~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (1009)
+++++++|+++.+|+||++++||||||||||+|+|++.++.+. .++.+
T Consensus 305 ----ak~~ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~--~~~~~-------------------------- 352 (885)
T 3b8c_A 305 ----SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVE--VFCKG-------------------------- 352 (885)
T ss_dssp ----TTTSCCCSSGGGHHHHTTCCCCEEECCCCCSCCCCCCCSCCCC--SSCSS--------------------------
T ss_pred ----HHCCEEECCCHHHHHHHCCCEEEECCCCCCCCCCEEEEEEEEE--CCCCC--------------------------
T ss_conf ----7198696895188897679989987998761685279987775--15899--------------------------
Q ss_pred CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCHHHHHHHHHHHHCCCE
Q ss_conf 43336999888877674555413788999918999999998220411630038998178840795199999999984989
Q 001824 287 EDLTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFE 366 (1009)
Q Consensus 287 ~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~lalC~tv~~~~~~~~~~~~y~~~spdE~Alv~~a~~~g~~ 366 (1009)
. ...+++...++|+... +++|.|.|+++++.+..
T Consensus 353 -----------------------------~--~~~~ll~~aa~~~~~~-------------~~~p~~~Al~~~~~~~~-- 386 (885)
T 3b8c_A 353 -----------------------------V--EKDQVLLFAAMASRVE-------------NQDAIDAAMVGMLADPK-- 386 (885)
T ss_dssp -----------------------------T--THHHHHHHHHHHCCSS-------------SCCSHHHHHHHTTCCTT--
T ss_pred -----------------------------C--CHHHHHHHHHHHHCCC-------------CCCCHHHHHHHHHHCHH--
T ss_conf -----------------------------9--9999999999972788-------------99915899999864636--
Q ss_pred EEEECCCEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCEEEEEECCCHHHHHHHHCCCCCCHHHHHH
Q ss_conf 99554984699955888775302798896740799998559999983899299999157036457641179430899999
Q 001824 367 FYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKNGRDFEVETRD 446 (1009)
Q Consensus 367 ~~~r~~~~i~i~~~~~~~~~~~~~~y~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~ 446 (1009)
. ....|++++.+||+|.||||+++++.++|+.++++|||++.|+++|... .+.++.+.+
T Consensus 387 ---------------~-----~~~~~~~~~~~pF~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~-~~~~~~~~~ 445 (885)
T 3b8c_A 387 ---------------E-----ARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELAKAS-NDLSKKVLS 445 (885)
T ss_dssp ---------------C-----CCCSSCCBCCCCCCTTTCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCCC-STTTTTHHH
T ss_pred ---------------H-----HHHCCCEEECCCCCCCCCEEEEEEEECCCCEEEEEECCHHHHHHHCCCC-HHHHHHHHH
T ss_conf ---------------5-----7624832201357852256899998048968999948899999764586-445799999
Q ss_pred HHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHCHHCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHH
Q ss_conf 99999863456999999927998999999999997311002199989998981002808988752024456790899999
Q 001824 447 HVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDK 526 (1009)
Q Consensus 447 ~l~~~a~~GlRtL~~a~r~l~~~e~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lq~~v~e~I~~ 526 (1009)
++++++.+|+|+|++|+|++++++ .+..|+|++++|+++++||+||+++++|+.
T Consensus 446 ~~~~~a~~G~rvl~vA~~~~~~~~--------------------------~~~~e~~l~~lGli~i~Dp~R~~a~~aI~~ 499 (885)
T 3b8c_A 446 IIDKYAERGLRSLAVARQVVPEKT--------------------------KESPGAPWEFVGLLPLFDPPRHDSAETIRR 499 (885)
T ss_dssp HHHHHTTTTCEEEEECCBCCCSSS--------------------------SSCCCCCCCCCEEEEECCCCCHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEEEECCCCCC--------------------------CCCCCCCCEEEEEEEEECCCCHHHHHHHHH
T ss_conf 999998579869999994466433--------------------------111356757999999606661208999999
Q ss_pred HHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 98729959999389887899999885854689618999057735677532202799999988767887532110000159
Q 001824 527 LAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQLSASG 606 (1009)
Q Consensus 527 L~~aGIkiwilTGD~~~tA~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 606 (1009)
|+++||++||+|||+..||.+||+++||..+... ..
T Consensus 500 l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~~-----~~--------------------------------------- 535 (885)
T 3b8c_A 500 ALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP-----SS--------------------------------------- 535 (885)
T ss_dssp HHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCST-----TS---------------------------------------
T ss_pred HHHCCCCEEEECCCCHHHHHHHHHHHCCCCCCCC-----CC---------------------------------------
T ss_conf 9976996899939986999999998097646677-----51---------------------------------------
Q ss_pred CCCCCEEEEECCCCHHHHHHH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHCCC
Q ss_conf 999873899917200376037-8899999996216811997089231999999987168986999728956823332077
Q 001824 607 GSSEAFALIIDGKSLTYALED-DIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEAD 685 (1009)
Q Consensus 607 ~~~~~~~lvi~G~~l~~~l~~-~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~vlaiGDG~NDv~ml~~Ad 685 (1009)
++.|..++..+.+ ++.+ +.. +..+|+|++|+||..+|+.+|+ .|+.|+|+|||.||+|||++||
T Consensus 536 --------~l~g~~~~~~~~~~~l~~----~~~--~~~v~arv~P~~K~~iV~~lq~-~g~~Vam~GDGvNDapaLk~Ad 600 (885)
T 3b8c_A 536 --------ALLGTHKDANLASIPVEE----LIE--KADGFAGVFPEHKYEIVKKLQE-RKHIVGMTGDGVNDAPALKKAD 600 (885)
T ss_dssp --------SCCBGGGGTTSCCSCHHH----HHH--TSCCEECCCHHHHHHHHHHHHH-TTCCCCBCCCSSTTHHHHHHSS
T ss_pred --------EEECCCCCCCCCHHHHHH----HHH--HCCEEEEECHHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHCC
T ss_conf --------445553122246357999----986--3868988789999999999997-7996999759812299998699
Q ss_pred EEEEECCCCCCCCCCCCCEECCC--HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
Q ss_conf 21895157653101146440022--5337887533131103110024788888899999999999976137774332579
Q 001824 686 IGIGISGVEGMQAVMSSDIAIAQ--FRYLERLLLVHGHWCYRRISSMICYFFYKNITFGLSVFLYEAYTTFSGQPAYNDW 763 (1009)
Q Consensus 686 VGI~i~g~e~~qa~~asD~~i~~--f~~l~~lll~~Gr~~~~r~~~~i~~~~~kni~~~~~~~~~~~~~~fsg~~~~~~~ 763 (1009)
|||+|. .....|+++||+++.+ |..+..+ +.+||.+|+|+++++.|.+..|+..++..++..+ ++. .++.++
T Consensus 601 vGIAmg-~gtd~ak~aADivl~~~~~~~I~~a-i~~gR~~~~ni~~~i~~~l~~n~~~~~~~~~~~~--~~~--~~l~p~ 674 (885)
T 3b8c_A 601 IGIAVA-DATDAARGASDIVLTEPGLSVIISA-VLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIAL--IWE--FDFSAF 674 (885)
T ss_dssp SCCCCS-SSHHHHGGGCSSCCSSCSHHHHTHH-HHTHHHHHHHHHHHHHHHHHHTTTTTSTTHHHHS--SCS--SCSCHH
T ss_pred EEEEEC-CCCHHHHHHCCEEECCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCC--CCCCHH
T ss_conf 759957-7129999843401335766689999-9999999999999999999999999999999997--038--675889
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-
Q ss_conf 9999999987699999873477788466510451200344454342002578677789999999999876202554469-
Q 001824 764 FLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNVLFSWRRIFGWMFNGLYSAIIIFFFCKKAMEHQAFND- 842 (1009)
Q Consensus 764 ~l~~~n~~~t~lp~i~~~~~d~d~~~~~~~~~P~lY~~~~~~~~~~~~~~~~~~~~~~~~s~vif~~~~~~~~~~~~~~- 842 (1009)
+++|.|++.+..+ ++++....+ .|+ .++. ......+..+++.|++++++.+.++++.+....+..
T Consensus 675 ~il~i~l~~d~~~-l~l~~~~~~--------~~~----~p~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 740 (885)
T 3b8c_A 675 MVLIIAILNDGTI-MTISKDRVK--------PSP----TPDS-WKLKEIFATGVVLGGYQAIMTVIFFWAAHKTDFFSDT 740 (885)
T ss_dssp HHHHHHHHHHTTT-CCCCCCCCC--------CSS----CCCS-TTTTTTTTTHHHHHSSTHHHHTTSSSCTTTTTTTTCC
T ss_pred HHHHHHHHHHHHH-HHHCCCCCC--------CCC----CCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 9999999987778-740465467--------545----8730-3589999999999999999999999999973765223
Q ss_pred CCCC---CCCHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHC
Q ss_conf 9953---3411455789999999999999997521--0158889999989999999999830287887405899999862
Q 001824 843 DGKT---VGRDIFGATMYTCIVWVVNLQLALAISY--FTLIQHIFIWGSIALWYLFMLAYGAITPTHSTNAYKVFIEALA 917 (1009)
Q Consensus 843 ~g~~---~~~~~~~~~~~t~~v~~~~~~~~~~~~~--~~~~~~~~i~~si~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 917 (1009)
.|.. .......+++|...++...+ .++.+++ |+|+.+...+..+++.+ ..++...+...... .++...+
T Consensus 741 ~~~~~~~~~~~~~~t~~~~~~~~~~~~-~~~~~Rs~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~ 814 (885)
T 3b8c_A 741 FGVRSIRDNNHELMGAVYLQVSIISQA-LIFVTRSRSWSFVERPGALLMIAFLI-AQLIATLIAVYANW----EFAKIRG 814 (885)
T ss_dssp CCSSCCGGGTHHHHTTTTTTTSSTTGG-GTTCSSSCTTTSTTSTTTTTSGGGSS-TTTTTTSSSSSCCC----CSSCCCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHH-HHHHHCCCCCCCCCCCCHHHHHHHHH-HHHHHHHHHHHCCC----CCCCCCC
T ss_conf 575411022999999999999999999-99976458887011864999999999-99999999986022----1031377
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 7858889999999997899999999998519
Q 001824 918 PAPLFWLVTLFVVISTLIPYFAYSAIQMRFF 948 (1009)
Q Consensus 918 ~s~~~wl~~l~~~~~~llp~~~~k~~~r~~~ 948 (1009)
.++.+|+.+++..++.+++..+.|++.|...
T Consensus 815 l~~~~~~~~~~~~~~~~~~~e~~k~~~~~~~ 845 (885)
T 3b8c_A 815 IGWGWAGVIWLYSIVTYFPLDVFKFAIRYIL 845 (885)
T ss_dssp CTTTTHHHHHHHTGGGTHHHHHHHHHHTTC-
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 6099999999999999999999999999762
No 6
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=1.00 E-value=1 Score=468.71 Aligned_cols=429 Identities=20% Similarity=0.252 Sum_probs=338.1
Q ss_pred EEEEECCCCCCC----CEEEEEEEE-----CCCCCCC--CCCCEEECCEEEECCCEEEEEEEEECCCC---HHHHCCCCC
Q ss_conf 799972799896----037999997-----6930247--99966870308804894999999845720---011027999
Q 001824 32 ATIKCEDPNANL----YSFVGSLIF-----EEQQHPL--TPQQLLLRDSKLRNTDYIYGAVVFTGHDT---KVIQNSTDP 97 (1009)
Q Consensus 32 g~i~~e~pn~~l----~~F~G~~~~-----~~~~~~l--~~~n~llrGs~l~nt~~~~gvVv~tG~~T---ki~~n~~~~ 97 (1009)
|.+..-.|...+ --.+|...+ +||+.|+ .+++.+++||.+.+ |++.+.|++||.+| |++++...+
T Consensus 232 GDiv~v~~Ge~IPaDg~vl~G~~~VdeS~LTGES~pv~K~~g~~v~~Gt~~~~-g~~~~~v~~~g~~T~l~~i~~lv~~a 310 (723)
T 3j09_A 232 GDIVIVRPGEKIPVDGVVVEGESYVDESMISGEPVPVLKSKGDEVFGATINNT-GVLKIRATRVGGETLLAQIVKLVEDA 310 (723)
T ss_dssp TCEEEECTTCBCCSEEEEEECCEEEECHHHHCCSSCEEECTTCEECTTCEECS-SCEEEEEEECGGGSHHHHHHHHHSSS
T ss_pred CCEEEECCCCEEEEEEEEEECCEEEECCCCCCCCCCEEECCCCEECCCEEEEC-CCEEEEEEEECCCCHHHHHHHHHHHH
T ss_conf 98999889998856799997776886000138876466368982304169706-72999999846743999999999975
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 99869698999899999999999999999998764202236773223334478999854589991468899999999986
Q 001824 98 PSKRSRIERKMDQIIYFMFFVVFTVAFVGSIFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLY 177 (1009)
Q Consensus 98 ~~k~s~le~~~n~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~i~l~ 177 (1009)
+.+++++++.+|+++.+++++.++++++.++.+.++... +|. ..+.+++.++
T Consensus 311 ~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~~--------~~~--------------------~~~~~~i~vl 362 (723)
T 3j09_A 311 MGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAHA--------PLL--------------------FAFTTLIAVL 362 (723)
T ss_dssp CCSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSSTTC--------TTC--------------------CSHHHHHHHH
T ss_pred HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--------CHH--------------------HHHHHHHHHH
T ss_conf 346983899999999999999999999999999985688--------699--------------------9999999999
Q ss_pred HCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEECCEEC
Q ss_conf 21324400245899999989776225222333369883015742000124615999748897411315999999938432
Q 001824 178 SYLIPISLYVSIEIVKVLQSIFINQDVQMYYEEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAY 257 (1009)
Q Consensus 178 ~~~iP~sL~v~i~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y 257 (1009)
+..|||+|+++++++...+..++ +++++++|+++.+|+||++++||||||||||+|+|++.++...+..
T Consensus 363 via~P~aL~la~p~a~~~~~~~~----------a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~~~~~~~~- 431 (723)
T 3j09_A 363 VVACPCAFGLATPTALTVGMGKG----------AELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGD- 431 (723)
T ss_dssp HHHSCTTHHHHHHHHHHHHHHHH----------HTTTCEESSTTHHHHGGGCCEEEEEHHHHTSCSCCEEEEEEESSSC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH----------HHCCEEEECHHHHHHHHCCCEEEECCCCCCCCCCEEEEEEEECCCC-
T ss_conf 75026789999999999999999----------9889389482899876249899984777552696279999807999-
Q ss_pred CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 78804899986430698863334688875433369998888776745554137889999189999999982204116300
Q 001824 258 GRGVTEVERAMNRKKGSPLIDVVNGLNTEEDLTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEV 337 (1009)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~lalC~tv~~~~ 337 (1009)
..++++..+.+..
T Consensus 432 --------------------------------------------------------------~~~~l~~aa~~e~----- 444 (723)
T 3j09_A 432 --------------------------------------------------------------ERELLRLAAIAER----- 444 (723)
T ss_dssp --------------------------------------------------------------HHHHHHHHHHHHT-----
T ss_pred --------------------------------------------------------------HHHHHHHHHHHHC-----
T ss_conf --------------------------------------------------------------8999999999850-----
Q ss_pred CCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEECCCEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEECCCCC
Q ss_conf 38998178840795199999999984989995549846999558887753027988967407999985599999838992
Q 001824 338 DENTGKVMYEAESPDEAAFVIAARELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGK 417 (1009)
Q Consensus 338 ~~~~~~~~y~~~spdE~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~y~il~~~~F~s~rkrmsviv~~~~g~ 417 (1009)
.++||++.|+++++++.|+.+.... .++. ...+ ++..
T Consensus 445 ---------~s~hP~~~Ai~~~a~~~~~~~~~~~-------------------~~~~--------~~g~-g~~~------ 481 (723)
T 3j09_A 445 ---------RSEHPIAEAIVKKALEHGIELGEPE-------------------KVEV--------IAGE-GVVA------ 481 (723)
T ss_dssp ---------TCCSHHHHHHHHHHHHTTCCCCSCC-------------------CCEE--------ETTT-EEEE------
T ss_pred ---------CCCCCHHHHHHHHHHHCCCCCCCCC-------------------CEEE--------ECCC-CEEE------
T ss_conf ---------4999542899999985499857864-------------------4599--------6698-1699------
Q ss_pred EEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHCHHCHHHHHHHHH
Q ss_conf 99999157036457641179430899999999998634569999999279989999999999973110021999899989
Q 001824 418 ILLLCKGADSVMFDRLAKNGRDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVT 497 (1009)
Q Consensus 418 ~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~a~r~l~~~e~~~~~~~~~~a~~~~~~~r~~~~~~~~ 497 (1009)
..+.+|+++.+.+. +....+...+++++++.+|+|++++|+
T Consensus 482 -~~~~~g~~~~~~~~----~~~~~~~~~~~~~~~~~~g~~~~~va~---------------------------------- 522 (723)
T 3j09_A 482 -DGILVGNKRLMEDF----GVAVSNEVELALEKLEREAKTAVIVAR---------------------------------- 522 (723)
T ss_dssp -TTEEEECHHHHHHT----TCCCCHHHHHHHHHHHTTTCEEEEEEE----------------------------------
T ss_pred -EEEEECCHHHHHHC----CCCCCHHHHHHHHHHHHCCCEEEEEEE----------------------------------
T ss_conf -99997789999754----998608999999999855982899978----------------------------------
Q ss_pred HHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHH
Q ss_conf 81002808988752024456790899999987299599993898878999998858546896189990577356775322
Q 001824 498 ETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKT 577 (1009)
Q Consensus 498 ~~iE~dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkiwilTGD~~~tA~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~ 577 (1009)
|++++|+++++|++||+++++|+.|+++||++||+|||+..+|..+|+++|+.
T Consensus 523 -----~~~~~G~i~i~D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~---------------------- 575 (723)
T 3j09_A 523 -----NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD---------------------- 575 (723)
T ss_dssp -----TTEEEEEEEEECCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS----------------------
T ss_pred -----CCEEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCC----------------------
T ss_conf -----99999999606875256999999999779979999998989999999985993----------------------
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Q ss_conf 02799999988767887532110000159999873899917200376037889999999621681199708923199999
Q 001824 578 GAKSEITKASKESVLHQINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVT 657 (1009)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV 657 (1009)
.++++++|+||+.+|
T Consensus 576 -----------------------------------------------------------------~~~~~~~P~~K~~~v 590 (723)
T 3j09_A 576 -----------------------------------------------------------------LVIAEVLPHQKSEEV 590 (723)
T ss_dssp -----------------------------------------------------------------EEECSCCTTCHHHHH
T ss_pred -----------------------------------------------------------------EEECCCCHHHHHHHH
T ss_conf -----------------------------------------------------------------899268999999999
Q ss_pred HHHHCCCCCEEEEECCCCCCHHHHHCCCEEEEECCCCCCCCCCCCCEECCC--HHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 998716898699972895682333207721895157653101146440022--533788753313110311002478888
Q 001824 658 RLVKSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQ--FRYLERLLLVHGHWCYRRISSMICYFF 735 (1009)
Q Consensus 658 ~~lk~~~~~~vlaiGDG~NDv~ml~~AdVGI~i~g~e~~qa~~asD~~i~~--f~~l~~lll~~Gr~~~~r~~~~i~~~~ 735 (1009)
+.+++ . +.|+|+|||.||++||+.|||||+| |+....++.+||+++.+ ++.+..+ +.+||+.++++++.+.|.|
T Consensus 591 ~~l~~-~-~~v~~vGDg~ND~~al~~A~vgiam-g~g~~~a~~~AD~vl~~~~~~~i~~~-i~~~r~~~~~i~~nl~~a~ 666 (723)
T 3j09_A 591 KKLQA-K-EVVAFVGDGINDAPALAQADLGIAV-GSGSDVAVESGDIVLIRDDLRDVVAA-IQLSRKTMSKIKQNIFWAL 666 (723)
T ss_dssp HHHTT-T-CCEEEEECSSTTHHHHHHSSEEEEC-CCCSCCSSCCSSEECSSCCTTHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHC-C-CEEEEEECCHHHHHHHHHCCEEEEE-CCCCHHHHHHCCEEEECCCHHHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_conf 99834-9-9399998982309999549987996-78759999869999967998899999-9999999999999999999
Q ss_pred HHHHHHHHHH
Q ss_conf 8899999999
Q 001824 736 YKNITFGLSV 745 (1009)
Q Consensus 736 ~kni~~~~~~ 745 (1009)
++|+..+.+.
T Consensus 667 ~~n~~~i~~a 676 (723)
T 3j09_A 667 IYNVILIPAA 676 (723)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
T ss_conf 9999999999
No 7
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}
Probab=1.00 E-value=1 Score=468.06 Aligned_cols=414 Identities=21% Similarity=0.272 Sum_probs=338.5
Q ss_pred ECCCCCCC--CCCCEEECCEEEECCCEEEEEEEEECCCC---HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 76930247--99966870308804894999999845720---01102799999869698999899999999999999999
Q 001824 52 FEEQQHPL--TPQQLLLRDSKLRNTDYIYGAVVFTGHDT---KVIQNSTDPPSKRSRIERKMDQIIYFMFFVVFTVAFVG 126 (1009)
Q Consensus 52 ~~~~~~~l--~~~n~llrGs~l~nt~~~~gvVv~tG~~T---ki~~n~~~~~~k~s~le~~~n~~~~~~~~~~~~~~~i~ 126 (1009)
++||+.|+ .+++.++.||.+.+ |++.+.|++||.+| |++++...++.+++++++.+|++..+++++.+++++++
T Consensus 276 LTGES~Pv~K~~gd~v~~Gt~~~~-G~~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~~ 354 (736)
T 3rfu_A 276 VTGEPIPVAKEASAKVIGATINQT-GSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLS 354 (736)
T ss_dssp STTCSSCEEECTTCEECTTCEEES-CCCCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCEEECCCCCCCCCEEECC-CEEEEEEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 578614278316886778648614-5099999984122599999999997432689799999999999999999999999
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 99876420223677322333447899985458999146889999999998621324400245899999989776225222
Q 001824 127 SIFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYLIPISLYVSIEIVKVLQSIFINQDVQM 206 (1009)
Q Consensus 127 ~i~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~i~~~~~~~~~~i~~d~~m 206 (1009)
++++.++.... .| ...+.+++.++..+|||+|+++++++...+..++
T Consensus 355 ~~~w~~~~~~~-------~~--------------------~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~------ 401 (736)
T 3rfu_A 355 FIVWALLGPQP-------AL--------------------SYGLIAAVSVLIIACPCALGLATPMSIMVGVGKG------ 401 (736)
T ss_dssp HHHHHHHCSSS-------ST--------------------THHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHH------
T ss_pred HHHHHHHCCCC-------HH--------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------
T ss_conf 99999967873-------29--------------------9999998774877324278888999999999997------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEECCEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 33336988301574200012461599974889741131599999993843278804899986430698863334688875
Q 001824 207 YYEEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTE 286 (1009)
Q Consensus 207 ~~~~~~~~~~~r~~~~~E~LG~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (1009)
+++++++|+++.+|+||+|++||||||||||+|+|++.++...+..
T Consensus 402 ----a~~gilvk~~~alE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~------------------------------ 447 (736)
T 3rfu_A 402 ----AQSGVLIKNAEALERMEKVNTLVVDKTGTLTEGHPKLTRIVTDDFV------------------------------ 447 (736)
T ss_dssp ----HHTTEEESCHHHHHHHTSCCEEEECCBTTTBCSSCEEEEEEESSSC------------------------------
T ss_pred ----HHCCEEECHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEEECCCC------------------------------
T ss_conf ----5151332337899986279999981898875895279999834887------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCHHHHHHHHHHHHCCCE
Q ss_conf 43336999888877674555413788999918999999998220411630038998178840795199999999984989
Q 001824 287 EDLTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFE 366 (1009)
Q Consensus 287 ~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~lalC~tv~~~~~~~~~~~~y~~~spdE~Alv~~a~~~g~~ 366 (1009)
. .+.+...+.+ ++.++||.+.|++++|++.|+.
T Consensus 448 ------------------------------~---~~~l~~aa~l--------------e~~s~hPla~Aiv~~a~~~~~~ 480 (736)
T 3rfu_A 448 ------------------------------E---DNALALAAAL--------------EHQSEHPLANAIVHAAKEKGLS 480 (736)
T ss_dssp ------------------------------H---HHHHHHHHHH--------------HHSSCCHHHHHHHHHHHTTCCC
T ss_pred ------------------------------H---HHHHHHHHHH--------------HHCCCCHHHHHHHHHHHHCCCC
T ss_conf ------------------------------7---8999999998--------------6228992899999999965998
Q ss_pred EEEECCCEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCEEEEEECCCHHHHHHHHCCCCCCHHHHHH
Q ss_conf 99554984699955888775302798896740799998559999983899299999157036457641179430899999
Q 001824 367 FYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKNGRDFEVETRD 446 (1009)
Q Consensus 367 ~~~r~~~~i~i~~~~~~~~~~~~~~y~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~ 446 (1009)
+. ...+|++.+++. +... .+|+ .+.+|+++.+.+... ......+
T Consensus 481 ~~---------------------------~~~~f~~~~g~g-v~~~-~~g~--~~~~G~~~~~~~~~~-----~~~~~~~ 524 (736)
T 3rfu_A 481 LG---------------------------SVEAFEAPTGKG-VVGQ-VDGH--HVAIGNARLMQEHGG-----DNAPLFE 524 (736)
T ss_dssp CC---------------------------CCSCCCCCTTTE-EEEC-SSSS--CEEEESHHHHHHHCC-----CCHHHHH
T ss_pred CC---------------------------CCCCCCCCCCCE-EEEE-ECCE--EEEECCHHHHHHCCC-----CHHHHHH
T ss_conf 66---------------------------754320248865-8999-9998--999738999987399-----7167899
Q ss_pred HHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHCHHCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHH
Q ss_conf 99999863456999999927998999999999997311002199989998981002808988752024456790899999
Q 001824 447 HVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDK 526 (1009)
Q Consensus 447 ~l~~~a~~GlRtL~~a~r~l~~~e~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lq~~v~e~I~~ 526 (1009)
..++++.+|+|++++|+ |.+++|+++++|++|++++++|+.
T Consensus 525 ~~~~~~~~G~~vl~va~---------------------------------------d~~~~G~i~i~D~i~~~~~~aI~~ 565 (736)
T 3rfu_A 525 KADELRGKGASVMFMAV---------------------------------------DGKTVALLVVEDPIKSSTPETILE 565 (736)
T ss_dssp HHHHHHHTTCEEEEEEE---------------------------------------TTEEEEEEEEECCBCSSHHHHHHH
T ss_pred HHHHHHHCCCEEEEEEE---------------------------------------CCEEEEEEEEECCCHHHHHHHHHH
T ss_conf 99999856986999987---------------------------------------998999998503220309999999
Q ss_pred HHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 98729959999389887899999885854689618999057735677532202799999988767887532110000159
Q 001824 527 LAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQLSASG 606 (1009)
Q Consensus 527 L~~aGIkiwilTGD~~~tA~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 606 (1009)
|+++||++||+|||+..+|..+|+++|+.
T Consensus 566 L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~--------------------------------------------------- 594 (736)
T 3rfu_A 566 LQQSGIEIVMLTGDSKRTAEAVAGTLGIK--------------------------------------------------- 594 (736)
T ss_dssp HHHHTCEEEEECSSCHHHHHHHHHHHTCC---------------------------------------------------
T ss_pred HHHCCCEEEEECCCCHHHHHHHHHHCCCC---------------------------------------------------
T ss_conf 99879949998798989999999985998---------------------------------------------------
Q ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHCCCE
Q ss_conf 99987389991720037603788999999962168119970892319999999871689869997289568233320772
Q 001824 607 GSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADI 686 (1009)
Q Consensus 607 ~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~vlaiGDG~NDv~ml~~AdV 686 (1009)
-++++++|++|..+|+.+++ .++.|+|+|||.||++||+.|||
T Consensus 595 ------------------------------------~v~a~~~P~~K~~~v~~l~~-~g~~V~~vGDG~ND~paL~~Adv 637 (736)
T 3rfu_A 595 ------------------------------------KVVAEIMPEDKSRIVSELKD-KGLIVAMAGDGVNDAPALAKADI 637 (736)
T ss_dssp ------------------------------------CEECSCCHHHHHHHHHHHHH-HSCCEEEEECSSTTHHHHHHSSE
T ss_pred ------------------------------------EEEEECCHHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHHCCE
T ss_conf ------------------------------------79970699999999999996-69989999898576999986997
Q ss_pred EEEECCCCCCCCCCCCCEECCC--HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 1895157653101146440022--5337887533131103110024788888899999999
Q 001824 687 GIGISGVEGMQAVMSSDIAIAQ--FRYLERLLLVHGHWCYRRISSMICYFFYKNITFGLSV 745 (1009)
Q Consensus 687 GI~i~g~e~~qa~~asD~~i~~--f~~l~~lll~~Gr~~~~r~~~~i~~~~~kni~~~~~~ 745 (1009)
||+| |+....++.+||+++.+ ++.+.++ +.+||..++++++++.|.|.+|+..+.+.
T Consensus 638 GIAm-g~g~d~a~~~AD~vl~~~~~~~i~~a-i~~sr~t~~~i~qnl~~a~~yN~~~iplA 696 (736)
T 3rfu_A 638 GIAM-GTGTDVAIESAGVTLLHGDLRGIAKA-RRLSESTMSNIRQNLFFAFIYNVLGVPLA 696 (736)
T ss_dssp EEEE-SSSCSHHHHHCSEEECSCCSTTHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEE-CCCCHHHHHHCCEEECCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 7994-78659999769999926987899999-99999999999999999999999999999
No 8
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=1.00 E-value=1 Score=461.86 Aligned_cols=408 Identities=21% Similarity=0.254 Sum_probs=329.9
Q ss_pred CCCCCCC--CCCCEEECCEEEECCCEEEEEEEEECCCC---HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6930247--99966870308804894999999845720---011027999998696989998999999999999999999
Q 001824 53 EEQQHPL--TPQQLLLRDSKLRNTDYIYGAVVFTGHDT---KVIQNSTDPPSKRSRIERKMDQIIYFMFFVVFTVAFVGS 127 (1009)
Q Consensus 53 ~~~~~~l--~~~n~llrGs~l~nt~~~~gvVv~tG~~T---ki~~n~~~~~~k~s~le~~~n~~~~~~~~~~~~~~~i~~ 127 (1009)
+||+.|+ .+++.+++||.+.+ |++.+.|++||.+| |++++...++.+++++++.+|++..+++++.++++++.+
T Consensus 184 TGES~Pv~K~~g~~v~~Gt~~~~-g~~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~ 262 (645)
T 3j08_A 184 SGEPVPVLKSKGDEVFGATINNT-GVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAF 262 (645)
T ss_dssp HCCSSCEEECTTCEECTTCEECS-SCEEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCEECCCCCEEECCEEEEC-CCEEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 69987656089997416679825-72999999727745999999999973146985899999999999999999999999
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 98764202236773223334478999854589991468899999999986213244002458999999897762252223
Q 001824 128 IFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYLIPISLYVSIEIVKVLQSIFINQDVQMY 207 (1009)
Q Consensus 128 i~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~i~~~~~~~~~~i~~d~~m~ 207 (1009)
+.+.++... +|.. .+.+++.+++..|||+|+++++++...+..++
T Consensus 263 ~~~~~~~~~--------~~~~--------------------~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~------- 307 (645)
T 3j08_A 263 IYWYFIAHA--------PLLF--------------------AFTTLIAVLVVACPCAFGLATPTALTVGMGKG------- 307 (645)
T ss_dssp HCSSCCCSC--------SCCC--------------------TTTTTHHHHHHHSCTTHHHHHHHHHHHHHHHH-------
T ss_pred HHHHHHCCC--------CHHH--------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------
T ss_conf 999995698--------6999--------------------99999999998736689999999999999999-------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEECCEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 33369883015742000124615999748897411315999999938432788048999864306988633346888754
Q 001824 208 YEEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEE 287 (1009)
Q Consensus 208 ~~~~~~~~~~r~~~~~E~LG~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (1009)
+++++++|+++.+|+||++++||||||||||+|+|++.++...+..
T Consensus 308 ---a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~------------------------------- 353 (645)
T 3j08_A 308 ---AELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGD------------------------------- 353 (645)
T ss_dssp ---HTTCCCCSSTTHHHHGGGCCEEEEEGGGTSSSSCCEEEEEEESSSC-------------------------------
T ss_pred ---HHCCEEECCCHHHHHHHCCCEEEECCCCCCCCCCEEEEEEEECCCC-------------------------------
T ss_conf ---9779376681699986279999986866655897079999817999-------------------------------
Q ss_pred CCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCHHHHHHHHHHHHCCCEE
Q ss_conf 33369998888776745554137889999189999999982204116300389981788407951999999999849899
Q 001824 288 DLTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFEF 367 (1009)
Q Consensus 288 ~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~lalC~tv~~~~~~~~~~~~y~~~spdE~Alv~~a~~~g~~~ 367 (1009)
..++++..+.|.. .++||++.|+++++++.|+.+
T Consensus 354 --------------------------------~~~~l~~aa~~e~--------------~s~hPla~Aiv~~a~~~g~~~ 387 (645)
T 3j08_A 354 --------------------------------ERELLRLAAIAER--------------RSEHPIAEAIVKKALEHGIEL 387 (645)
T ss_dssp --------------------------------HHHHHHHHHHHHT--------------TCCSHHHHHHHHHHHHTTCCC
T ss_pred --------------------------------HHHHHHHHHHHHH--------------CCCCHHHHHHHHHHHHCCCCC
T ss_conf --------------------------------7999999999751--------------588746799999999659986
Q ss_pred EEECCCEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCEEEEEECCCHHHHHHHHCCCCCCHHHHHHH
Q ss_conf 95549846999558887753027988967407999985599999838992999991570364576411794308999999
Q 001824 368 YQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKNGRDFEVETRDH 447 (1009)
Q Consensus 368 ~~r~~~~i~i~~~~~~~~~~~~~~y~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~ 447 (1009)
.... .++ +...+ ++.. . .+.+|+++.+.+. +....+...++
T Consensus 388 ~~~~-------------------~~~--------~~~g~-g~~~----~---~v~~g~~~~~~~~----~~~~~~~~~~~ 428 (645)
T 3j08_A 388 GEPE-------------------KVE--------VIAGE-GVVA----D---GILVGNKRLMEDF----GVAVSNEVELA 428 (645)
T ss_dssp CSCC-------------------CCE--------EETTT-EEEE----T---TEEEECHHHHHHT----TCCCCHHHHHH
T ss_pred CCCC-------------------CEE--------EECCC-CEEE----E---EEEECCHHHHHHC----CCCCCHHHHHH
T ss_conf 7865-------------------359--------96588-4699----9---9998879999754----98751889999
Q ss_pred HHHHHHCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHCHHCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHH
Q ss_conf 99998634569999999279989999999999973110021999899989810028089887520244567908999999
Q 001824 448 VNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKL 527 (1009)
Q Consensus 448 l~~~a~~GlRtL~~a~r~l~~~e~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lq~~v~e~I~~L 527 (1009)
+++++.+|+|++++|+ |++++|+++++|++||+++++|+.|
T Consensus 429 ~~~~~~~g~~~l~va~---------------------------------------~~~~~G~i~~~D~l~~~~~~~i~~L 469 (645)
T 3j08_A 429 LEKLEREAKTAVIVAR---------------------------------------NGRVEGIIAVSDTLKESAKPAVQEL 469 (645)
T ss_dssp HHHHHTTTCCCEEEEE---------------------------------------TTEEEEEEEEECCCTTTHHHHHHHH
T ss_pred HHHHHHCCCEEEEEEE---------------------------------------CCEEEEEEEECCCCHHHHHHHHHHH
T ss_conf 9999855983899988---------------------------------------9999999993487656799999999
Q ss_pred HHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 87299599993898878999998858546896189990577356775322027999999887678875321100001599
Q 001824 528 AQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQLSASGG 607 (1009)
Q Consensus 528 ~~aGIkiwilTGD~~~tA~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 607 (1009)
+++|+++||+|||+.++|..+++++|+.
T Consensus 470 ~~~Gi~v~~~TGd~~~~a~~ia~~lgi~---------------------------------------------------- 497 (645)
T 3j08_A 470 KRMGIKVGMITGDNWRSAEAISRELNLD---------------------------------------------------- 497 (645)
T ss_dssp HHTTCEEEEECSSCHHHHHHHHHHHTCS----------------------------------------------------
T ss_pred HHCCCEEEEEECCCHHHHHHHHHHCCCC----------------------------------------------------
T ss_conf 9779979999088879999999983997----------------------------------------------------
Q ss_pred CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHCCCEE
Q ss_conf 99873899917200376037889999999621681199708923199999998716898699972895682333207721
Q 001824 608 SSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIG 687 (1009)
Q Consensus 608 ~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~vlaiGDG~NDv~ml~~AdVG 687 (1009)
.++++++|+||..+++.+++ . +.|+|+|||.||++|++.||||
T Consensus 498 -----------------------------------~~~~~~~P~~K~~~v~~l~~-~-~~v~~vGDg~ND~~al~~A~vg 540 (645)
T 3j08_A 498 -----------------------------------LVIAEVLPHQKSEEVKKLQA-K-EVVAFVGDGINDAPALAQADLG 540 (645)
T ss_dssp -----------------------------------EEECSCCTTCHHHHHHHHTT-T-CCEEEEECSSSCHHHHHHSSEE
T ss_pred -----------------------------------EEEEECCHHHHHHHHHHHHH-C-CEEEEEECCHHHHHHHHHCCEE
T ss_conf -----------------------------------89983787768999999860-9-9599996977689999759988
Q ss_pred EEECCCCCCCCCCCCCEECCC--HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 895157653101146440022--5337887533131103110024788888899999999
Q 001824 688 IGISGVEGMQAVMSSDIAIAQ--FRYLERLLLVHGHWCYRRISSMICYFFYKNITFGLSV 745 (1009)
Q Consensus 688 I~i~g~e~~qa~~asD~~i~~--f~~l~~lll~~Gr~~~~r~~~~i~~~~~kni~~~~~~ 745 (1009)
|+| |+....++.+||+++.+ ++.+..+ +.+||+.++++++.+.|.+++|+..+...
T Consensus 541 iam-g~g~~~a~~~AD~vl~~~~~~~i~~~-i~~~r~~~~~i~~nl~~a~~~N~~~i~la 598 (645)
T 3j08_A 541 IAV-GSGSDVAVESGDIVLIRDDLRDVVAA-IQLSRKTMSKIKQNIFWALIYNVILIPAA 598 (645)
T ss_dssp EEE-CCCSCCSSCCSSSEESSCCTTHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEE-CCCCHHHHHHCCEEEECCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 994-88759999869999936998899999-99999999999999999999999999999
No 9
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=1.00 E-value=1 Score=211.39 Aligned_cols=138 Identities=23% Similarity=0.323 Sum_probs=114.3
Q ss_pred CCCEEEEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHCHHH
Q ss_conf 28089887520244567908999999872995999938988789999988585468961899905773567753220279
Q 001824 502 KDLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKS 581 (1009)
Q Consensus 502 ~dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkiwilTGD~~~tA~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~ 581 (1009)
.+..+.|...++|+++|+++++++.|++.|++++|+|||+..++..++..+|+..
T Consensus 123 ~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~------------------------- 177 (263)
T 2yj3_A 123 INGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE------------------------- 177 (263)
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Q ss_conf 99999887678875321100001599998738999172003760378899999996216811997089231999999987
Q 001824 582 EITKASKESVLHQINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVK 661 (1009)
Q Consensus 582 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk 661 (1009)
+|..+.|+.|..+++.++
T Consensus 178 --------------------------------------------------------------~f~~~~p~~k~~~~~~l~ 195 (263)
T 2yj3_A 178 --------------------------------------------------------------YYSNLSPEDKVRIIEKLK 195 (263)
Q ss_pred CCCCCEEEEECCCCCCHHHHHCCCEEEEECCCCCCCCCCCCCEEC--CCHHHHHHHHHHCCCHHHHHHHH
Q ss_conf 168986999728956823332077218951576531011464400--22533788753313110311002
Q 001824 662 SGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAI--AQFRYLERLLLVHGHWCYRRISS 729 (1009)
Q Consensus 662 ~~~~~~vlaiGDG~NDv~ml~~AdVGI~i~g~e~~qa~~asD~~i--~~f~~l~~lll~~Gr~~~~r~~~ 729 (1009)
. .+..+++||||.||++|++.|++||++. .....+...+|+++ .++..+..+ +..+|...++++.
T Consensus 196 ~-~~~~~~~VGD~~~D~~aa~~Agv~va~g-~~~~~~~~~ad~v~~~~~l~~l~~~-l~~~r~~~~~i~~ 262 (263)
T 2yj3_A 196 Q-NGNKVLMIGDGVNDAAALALADVSVAMG-NGVDISKNVADIILVSNDIGTLLGL-IKNRKRLSNAIPS 262 (263)
No 10
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=1.00 E-value=1 Score=174.23 Aligned_cols=272 Identities=25% Similarity=0.287 Sum_probs=196.2
Q ss_pred CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEECCEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 69883015742000124615999748897411315999999938432788048999864306988633346888754333
Q 001824 211 ADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEEDLT 290 (1009)
Q Consensus 211 ~~~~~~~r~~~~~E~LG~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1009)
+++++++|+++.+|.|++++.|+||||||||.+.+.+..+...+. . +
T Consensus 14 ~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~----~--~--------------------------- 60 (287)
T 3a1c_A 14 AELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG----D--E--------------------------- 60 (287)
T ss_dssp CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS----C--H---------------------------
T ss_pred HHCCEEEECCHHHHHHHCCCEEEEECCCCCCCCCEEEEEEEECCC----C--H---------------------------
T ss_conf 879979968089988536999999689988289779999981799----9--9---------------------------
Q ss_pred CCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEE
Q ss_conf 69998888776745554137889999189999999982204116300389981788407951999999999849899955
Q 001824 291 ESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFEFYQR 370 (1009)
Q Consensus 291 ~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~lalC~tv~~~~~~~~~~~~y~~~spdE~Alv~~a~~~g~~~~~r 370 (1009)
.+++.. |..+ + ..+.+|.+.|+..+++..|+.....
T Consensus 61 ------------------------------~~~l~~---~~~~--e---------~~s~hp~~~a~~~~~~~~g~~~~~~ 96 (287)
T 3a1c_A 61 ------------------------------RELLRL---AAIA--E---------RRSEHPIAEAIVKKALEHGIELGEP 96 (287)
T ss_dssp ------------------------------HHHHHH---HHHH--T---------TTCCSHHHHHHHHHHHHTTCCCCCC
T ss_pred ------------------------------HHHHHH---HHHH--H---------HCCCCHHHHHHHHHHHHCCCCCCCC
T ss_conf ------------------------------999999---9997--5---------2179979999999998659985555
Q ss_pred CCCEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCEEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHH
Q ss_conf 49846999558887753027988967407999985599999838992999991570364576411794308999999999
Q 001824 371 TQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKNGRDFEVETRDHVNK 450 (1009)
Q Consensus 371 ~~~~i~i~~~~~~~~~~~~~~y~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~ 450 (1009)
..+ ....|. .+.. . .+.+|.++.+.+. +....+......+.
T Consensus 97 --~~~-~~~~G~-----------------------~~~~------~---~~~~g~~~~~~~~----~~~~~~~~~~~~~~ 137 (287)
T 3a1c_A 97 --EKV-EVIAGE-----------------------GVVA------D---GILVGNKRLMEDF----GVAVSNEVELALEK 137 (287)
T ss_dssp --SCE-EEETTT-----------------------EEEE------T---TEEEECHHHHHHT----TCCCCHHHHHHHHH
T ss_pred --CCC-EEECCC-----------------------CEEE------E---EEEECCHHHHHHC----CCCCCHHHHHHHHH
T ss_conf --441-462488-----------------------7288------9---9998899999865----99750778999999
Q ss_pred HHHCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHCHHCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHC
Q ss_conf 98634569999999279989999999999973110021999899989810028089887520244567908999999872
Q 001824 451 YADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQA 530 (1009)
Q Consensus 451 ~a~~GlRtL~~a~r~l~~~e~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lq~~v~e~I~~L~~a 530 (1009)
+..+|.+++++++ |..+++....++++.|++.++++.|+++
T Consensus 138 ~~~~g~~~i~~~~---------------------------------------d~~~~~~~~~~~~~~~g~~~~l~~L~~~ 178 (287)
T 3a1c_A 138 LEREAKTAVIVAR---------------------------------------NGRVEGIIAVSDTLKESAKPAVQELKRM 178 (287)
T ss_dssp HHHTTCEEEEEEE---------------------------------------TTEEEEEEEEECCBCTTHHHHHHHHHHT
T ss_pred HHHCCCEEEEEEE---------------------------------------CCEEEEEEEECCCCCHHHHHHHHHHHHC
T ss_conf 8747975999999---------------------------------------9989999995453614189999999977
Q ss_pred CCEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 99599993898878999998858546896189990577356775322027999999887678875321100001599998
Q 001824 531 GIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQLSASGGSSE 610 (1009)
Q Consensus 531 GIkiwilTGD~~~tA~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 610 (1009)
|+++.++||+....+..+...+|+..
T Consensus 179 g~~~~i~T~~~~~~~~~~l~~~gl~~------------------------------------------------------ 204 (287)
T 3a1c_A 179 GIKVGMITGDNWRSAEAISRELNLDL------------------------------------------------------ 204 (287)
T ss_dssp TCEEEEECSSCHHHHHHHHHHHTCSE------------------------------------------------------
T ss_pred CCEEEEEECCCHHHHHHHHHHHCCCE------------------------------------------------------
T ss_conf 98599990989899999999809813------------------------------------------------------
Q ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHCCCEEEEE
Q ss_conf 73899917200376037889999999621681199708923199999998716898699972895682333207721895
Q 001824 611 AFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIGI 690 (1009)
Q Consensus 611 ~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~vlaiGDG~NDv~ml~~AdVGI~i 690 (1009)
.|..+.|..|...++.+.. . ..+++|||+.||+.|.+.|+++|++
T Consensus 205 ---------------------------------~f~~i~~~~K~~~~~~l~~-~-~~~~~vGDs~~Di~~a~~ag~~v~~ 249 (287)
T 3a1c_A 205 ---------------------------------VIAEVLPHQKSEEVKKLQA-K-EVVAFVGDGINDAPALAQADLGIAV 249 (287)
T ss_dssp ---------------------------------EECSCCTTCHHHHHHHHTT-T-CCEEEEECTTTCHHHHHHSSEEEEE
T ss_pred ---------------------------------EEEECCHHHHHHHHHHHHC-C-CEEEEEECCHHHHHHHHHCCEEEEE
T ss_conf ---------------------------------1100581779999999825-8-8399997977789999978952996
Q ss_pred CCCCCCCCCCCCCEEC--CCHHHHHHHHHHCCCHHHHHHH
Q ss_conf 1576531011464400--2253378875331311031100
Q 001824 691 SGVEGMQAVMSSDIAI--AQFRYLERLLLVHGHWCYRRIS 728 (1009)
Q Consensus 691 ~g~e~~qa~~asD~~i--~~f~~l~~lll~~Gr~~~~r~~ 728 (1009)
. .........+|+++ .++..+..+ +..+|..+++++
T Consensus 250 ~-~~~~~~~~~ad~v~~~~~~~~l~~~-l~~~~~~~~~i~ 287 (287)
T 3a1c_A 250 G-SGSDVAVESGDIVLIRDDLRDVVAA-IQLSRKTMSKIK 287 (287)
T ss_dssp C-CCSCCSSCCSSEEESSSCTHHHHHH-HHTTC-------
T ss_pred C-CCCHHHHHHCCEEEECCCHHHHHHH-HHHHHHHHHHHC
T ss_conf 7-8877889629999947998999999-999999998509
Done!