Your job contains 1 sequence.
>001828
MGQVGLPCGFQLICFWKMLWMELKLLQLVLLKFSLALQVVNGTTWHDTFLGLWIAALRLL
QRERDPSEGPVPRIDSSLCMVLSVTTLTVADIIEEEESELIDETEQSPSNLPKDKQAPGR
RRKDLVTSLQLLGDFEDMLTPPPFVRSIANQAAAKAIMFISGLTVGNGYYESVSMNGLAT
SCLGNMRHLIVEACIARNLLDTSAYLWPGYVNASDSNQVPCSIATQMSGWSSLMKGSPLT
PSLTNALVVTPASSLAEIEKVYEIAVNGSDDEKICAATVLCGASLVRGWSVQENTILFII
KLLSPPVPADYSGSESHLIGYAALLNTLLVGISSVDCIQIFSLHGWVPLLAAALMPICEV
FGSSIPNASWTLSSGEEFSCYAVFSNAFTILVRLWRFHKPPLEQLTVDMPLVASQLSPEY
LLLVRNSKLASFGTSPKDQMKSKRFSKNIKFSTDPIFMDSFPKLKRWYRQNEECIASTLT
GLVHGTSVHLIVDALLTKMFRKINRSGTPLTSATSGSTNSSGSGLEDVSIKLKVPAWDIL
EATPFVLDAALAACAHGRLSPRELATGLKELSDCLPATLATVVSYFSAEVTRGLWKPAFM
NGTDWPSPATNLSSIEQQIKKILAATGVDVPTVAVGGNSPATLPLPLAALVSLTITFKLD
KASDRFLALVGLGLSSLASSCPWPCMPIVASLWAQKVKRWNDFLVFSASGTVFHYNTDAV
VQLLKSCFTSTLGLTSSHNYSNGGVGALLGHGFGSHFSGGISPVGPGILYLRVHRSVRDV
MFMKEEILSILMHCVRDIASCGLPREKLEKLKKTKHGMRYGQVSLAAAMTRAKLAASLGA
SLVWISGGSSLVHSLLTETLPSWFISVHGLVQEGGESGCMVGMLGGYALAYFAVFCATFA
WGVDSESRASKKRPTVLGTHLEFLASALDRKISVGCDCATWRAYVSGFVTLIVGCTPTWM
LEINVDALKRLSKGLRQWDEEELALTLLGVGGVGAMGAAAQLIVESKI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001828
(1008 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2039356 - symbol:REF4 "AT2G48110" species:3702... 2371 2.6e-286 3
TAIR|locus:2088050 - symbol:RFR1 "AT3G23590" species:3702... 2492 6.2e-259 1
>TAIR|locus:2039356 [details] [associations]
symbol:REF4 "AT2G48110" species:3702 "Arabidopsis
thaliana" [GO:0009698 "phenylpropanoid metabolic process"
evidence=IMP] [GO:0016020 "membrane" evidence=TAS] [GO:2000762
"regulation of phenylpropanoid metabolic process" evidence=IGI]
EMBL:CP002685 GO:GO:0016020 GO:GO:0006355 GO:GO:0009698
GO:GO:0006351 EMBL:AC006072 GO:GO:0016592 eggNOG:NOG257621
HOGENOM:HOG000242204 GO:GO:2000762 EMBL:X96481 IPI:IPI00517586
PIR:E84923 RefSeq:NP_566125.4 UniGene:At.36290 PRIDE:F4IN69
EnsemblPlants:AT2G48110.1 GeneID:819423 KEGG:ath:AT2G48110
TAIR:At2g48110 InParanoid:Q9ZU78 OMA:ALWLPID Uniprot:F4IN69
Length = 1275
Score = 2371 (839.7 bits), Expect = 2.6e-286, Sum P(3) = 2.6e-286
Identities = 465/759 (61%), Positives = 552/759 (72%)
Query: 227 MSGWSSLMKGSPLTPSLTNALVVTPASSLAEIEKVYEIAVNGSDDEKICAATVLCGASLV 286
+S WS +MKGSPLTPSLTN+L+ TPASSLAEIEK+YE+A GS+DEKI A++LCGASL
Sbjct: 492 ISCWSLVMKGSPLTPSLTNSLITTPASSLAEIEKMYEVATTGSEDEKIAVASILCGASLF 551
Query: 287 RGWSVQENTILFIIKLLSPPVPADYSGSESHLIGYAALLNTLLVGISSVDCIQIFSLHGW 346
RGWS+QE+ I+FI+ LLSPP PAD SGS SHLI A LN LLVGIS +DC+ IFSLHG
Sbjct: 552 RGWSIQEHVIIFIVTLLSPPAPADLSGSYSHLINSAPFLNVLLVGISPIDCVHIFSLHGV 611
Query: 347 VPLLAAALMPICEVFGSSIPNASWTLSSGEEFSCYAVFSNAFTILVRLWRFHKPPLEQLT 406
VPLLA ALMPICE FGS +PN +WTL +GE S +AVFS AFT+L+RLWRF PPL+ +
Sbjct: 612 VPLLAGALMPICEAFGSGVPNITWTLPTGELISSHAVFSTAFTLLLRLWRFDHPPLDYVL 671
Query: 407 VDMPLVASQLSPEYLLLVRNSKLASFGTSPKDQMKSKRFSKNIKFSTDPIFMDSFPKLKR 466
D+P V Q SPEYLLLVRN +L FG SPKD+M +RFSK I S DPIFMDSFP+LK+
Sbjct: 672 GDVPPVGPQPSPEYLLLVRNCRLECFGKSPKDRMARRRFSKVIDISVDPIFMDSFPRLKQ 731
Query: 467 WYRQNEECIASTLTGLVHGTSVHLIVDALLTKMFRKINRSGTPLXXXXXXXXXXXXXXLE 526
WYRQ++EC+AS L+ L G+ VH IVD+LL+ MF+K N+ G+ +
Sbjct: 732 WYRQHQECMASILSELKTGSPVHHIVDSLLSMMFKKANKGGSQSLTPSSGSSSLSTSGGD 791
Query: 527 DVSIKLKVPAWDILEATPFVLDAALAACAHGRLSPRELATGLKELSDCLPATLATVVSYF 586
D S +LK+PAWDILEA PFVLDAAL ACAHG LSPRELATGLK L+D LPATL T+VSYF
Sbjct: 792 DSSDQLKLPAWDILEAAPFVLDAALTACAHGSLSPRELATGLKILADFLPATLGTMVSYF 851
Query: 587 SAEVTRGLWKPAFMNGTDWPSPATNLSSIEQQIKKILAATGVDVPTVAVGGNXXXXXXXX 646
S+EVTRGLWKP MNGTDWPSPA NL+S+EQQI+KILAATGVDVP + G
Sbjct: 852 SSEVTRGLWKPVSMNGTDWPSPAANLASVEQQIEKILAATGVDVPRLPADGISAATLPLP 911
Query: 647 XXXXXXXXITFKLDKASDRFXXXXXXXXXXXXXXCPWPCMPIVASLWAQKVKRWNDFLVF 706
IT+KLDKA++RF CPWPCMPIV SLW QKVKRW+DFL+F
Sbjct: 912 LAALVSLTITYKLDKATERFLVLVGPALDSLAAACPWPCMPIVTSLWTQKVKRWSDFLIF 971
Query: 707 SASGTVFHYNTDAVVQLLKSCFTSTLGLT-SSHNYSNXXXXXXXXXXXXXXXXXXISPVG 765
SAS TVFH+N DAV+QLL+SCFT TLGLT +S S IS
Sbjct: 972 SASRTVFHHNRDAVIQLLRSCFTCTLGLTPTSQLCSYGGVGALLGHGFGSRYSGGISTAA 1031
Query: 766 PGILYLRVHRSVRDVMFMKEEILSILMHCVRDIASCGLPREKLEKLKKTKHGMRYG--QV 823
PGILY++VHRS+RDVMF+ EEILS+LM V+ IA+ LP + EKLKKTK G RYG QV
Sbjct: 1032 PGILYIKVHRSIRDVMFLTEEILSLLMFSVKSIATRELPAGQAEKLKKTKDGSRYGIGQV 1091
Query: 824 SXXXXXXXXXXXXXXGASLVWISGGSSLVHSLLTETLPSWFISVHGLVQEGGESGCMVGM 883
S GASLVWISGG +LV +L+ ETLPSWFISVHG E E G MV M
Sbjct: 1092 SLSLAMRRVKLAASLGASLVWISGGLNLVQALIKETLPSWFISVHG---EEDELGGMVPM 1148
Query: 884 LGGYALAYFAVFCATFAWGVDSESRASKKRPTVLGTHLEFLASALDRKISVGCDCATWRA 943
L GYALAYFA+ + FAWGVDS ASK+RP VL HLEF+ SAL+ KIS+GCD ATW+A
Sbjct: 1149 LRGYALAYFAILSSAFAWGVDSSYPASKRRPRVLWLHLEFMVSALEGKISLGCDWATWQA 1208
Query: 944 YVSGFVTLIVGCTPTWMLEINVDALKRLSKGLRQWDEEE 982
YV+GFV+L+V CTP W+LE++V+ +KRLSK LRQW+E++
Sbjct: 1209 YVTGFVSLMVQCTPAWVLEVDVEVIKRLSKSLRQWNEQD 1247
Score = 315 (115.9 bits), Expect = 2.6e-286, Sum P(3) = 2.6e-286
Identities = 67/126 (53%), Positives = 85/126 (67%)
Query: 57 LRLLQRERDPSEGPVPRIDSSLCMVLSVTTLTVADXXXXXXXXXXXXXXQSPSNLPKDKQ 116
L +L ERDP EGPVPR D+ LC++LSVT L VA+ SPSN K+K+
Sbjct: 345 LEILSEERDPIEGPVPRTDTFLCVLLSVTPLAVANIIEEEESQWIDQTSSSPSNQWKEKK 404
Query: 117 APGRRRKDLVTSLQLLGDFEDMLTPPPFVRSIANQAAAKAIMFISGLTVGNGYYESVSMN 176
G+ R+ L+ SLQ LGD+E +LTPP V+S+ANQAAAKAIMFISG+T NG YE+ SM+
Sbjct: 405 --GKCRQGLINSLQQLGDYESLLTPPRSVQSVANQAAAKAIMFISGITNSNGSYENTSMS 462
Query: 177 GLATSC 182
A+ C
Sbjct: 463 ESASGC 468
Score = 106 (42.4 bits), Expect = 2.6e-286, Sum P(3) = 2.6e-286
Identities = 18/26 (69%), Positives = 21/26 (80%)
Query: 38 QVVNGTTWHDTFLGLWIAALRLLQRE 63
Q N T+WHD FL LW+AALRL+QRE
Sbjct: 307 QAANSTSWHDAFLALWLAALRLVQRE 332
>TAIR|locus:2088050 [details] [associations]
symbol:RFR1 "AT3G23590" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0016592
"mediator complex" evidence=IDA] [GO:2000762 "regulation of
phenylpropanoid metabolic process" evidence=IMP] [GO:0007155 "cell
adhesion" evidence=RCA] [GO:0010090 "trichome morphogenesis"
evidence=RCA] [GO:0045010 "actin nucleation" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0071555 "cell wall organization" evidence=RCA] EMBL:CP002686
GO:GO:0006355 GO:GO:0009698 GO:GO:0006351 EMBL:AB023036
GO:GO:0016592 EMBL:AK117119 EMBL:AK230008 IPI:IPI00527950
RefSeq:NP_189001.1 UniGene:At.23102 IntAct:Q9LUG9 PRIDE:Q9LUG9
EnsemblPlants:AT3G23590.1 GeneID:821938 KEGG:ath:AT3G23590
TAIR:At3g23590 eggNOG:NOG257621 HOGENOM:HOG000242204
InParanoid:Q9LUG9 OMA:LTITYKI PhylomeDB:Q9LUG9
ProtClustDB:CLSN2684326 Genevestigator:Q9LUG9 GO:GO:2000762
Uniprot:Q9LUG9
Length = 1309
Score = 2492 (882.3 bits), Expect = 6.2e-259, P = 6.2e-259
Identities = 484/863 (56%), Positives = 611/863 (70%)
Query: 122 RKDLVTSLQLLGDFEDMLTPPPFVRSIANQAAAKAIMFISGLTVGNGYYESVSMNGLATS 181
R DLVTSLQ+LGDF +L PP V S AN+AA KAI+F+SG VG ++ ++M + +
Sbjct: 425 RDDLVTSLQVLGDFPGLLAPPKCVVSAANKAATKAILFLSGGNVGKSCFDVINMKDMPVN 484
Query: 182 CLGNMRHLIVEACIARNLLDTSAYLWPGYVNASDSNQVPCSIATQMSGWSSLMKGSPLTP 241
C GNMRHLIVEACIARN+LD SAY WPGYVN NQ+P S+ ++ WSS +KG+PL
Sbjct: 485 CSGNMRHLIVEACIARNILDMSAYSWPGYVNGR-INQIPQSLPNEVPCWSSFVKGAPLNA 543
Query: 242 SLTNALVVTPASSLAEIEKVYEIAVNGSDDEKICAATVLCGASLVRGWSVQENTILFIIK 301
++ N LV PASSLAE+EK++E+AV GSDDEKI AATVLCGASL RGW++QE+T+ ++ +
Sbjct: 544 AMVNTLVSVPASSLAELEKLFEVAVKGSDDEKISAATVLCGASLTRGWNIQEHTVEYLTR 603
Query: 302 LLSPPVPADYSGSESHLIGYAALLNTLLVGISSVDCIQIFSLHGWVPLLAAALMPICEVF 361
LLSPPVPADYS +E+HLIGYA +LN ++VGI SVD IQIFSLHG VP LA +LMPICE F
Sbjct: 604 LLSPPVPADYSRAENHLIGYACMLNVVIVGIGSVDSIQIFSLHGMVPQLACSLMPICEEF 663
Query: 362 GSSIPNASWTLSSGEEFSCYAVFSNAFTILVRLWRFHKPPLEQLTVDMPLVASQLSPEYL 421
GS P+ SWTL SGE S Y+VFSNAFT+L++LWRF+ PP+E D+P V SQL+PE+L
Sbjct: 664 GSYTPSVSWTLPSGEAISAYSVFSNAFTLLLKLWRFNHPPIEHGVGDVPTVGSQLTPEHL 723
Query: 422 LLVRNSKLASFGTSPKDQMKSKRFSKNIKF-STDPIFMDSFPKLKRWYRQNEECIASTLT 480
L VRNS L S +D+ + KR S+ + S P+F+DSFPKLK WYRQ++ CIA+TL+
Sbjct: 724 LSVRNSYLVSSEILDRDRNR-KRLSEVARAASCQPVFVDSFPKLKVWYRQHQRCIAATLS 782
Query: 481 GLVHGTSVHLIVDALLTKMFRKINRSGTPLXXXXXXXXXXXXXXLEDVSIKLKVPAWDIL 540
GL HG+ VH V+ALL F K+ S T L ED +I+ + PAWDIL
Sbjct: 783 GLTHGSPVHQTVEALLNMTFGKVRGSQT-LNPVNSGTSSSSGAASEDSNIRPEFPAWDIL 841
Query: 541 EATPFVLDAALAACAHGRLSPRELATGLKELSDCLPATLATVVSYFSAEVTRGLWKPAFM 600
+A P+V+DAAL AC HGRLSPR+LATGLK+L+D LPA+LAT+VSYFSAEV+RG+WKP FM
Sbjct: 842 KAVPYVVDAALTACTHGRLSPRQLATGLKDLADFLPASLATIVSYFSAEVSRGVWKPVFM 901
Query: 601 NGTDWPSPATNLSSIEQQIKKILAATGVDVPTVAVGGNXXXXXXXXXXXXXXXXITFKLD 660
NG DWPSPATNLS++E+ I KILA TGVD+P++A GG+ IT+K+D
Sbjct: 902 NGVDWPSPATNLSTVEEYITKILATTGVDIPSLAPGGSSPATLPLPLAAFVSLTITYKID 961
Query: 661 KASDRFXXXXXXXXXXXXXXCPWPCMPIVASLWAQKVKRWNDFLVFSASGTVFHYNTDAV 720
KAS+RF CPWPCMPIVASLW QK KRW DFLVFSAS TVF +N DAV
Sbjct: 962 KASERFLNLAGPALECLAAGCPWPCMPIVASLWTQKAKRWFDFLVFSASRTVFLHNQDAV 1021
Query: 721 VQLLKSCFTSTLGLTSSHNYSNXXXXXXXXXXXXXXXXXXISPVGPGILYLRVHRSVRDV 780
+QLL++CF++TLGL ++ ++ ISPV PGILYLR++R++RD
Sbjct: 1022 IQLLRNCFSATLGLNAAPMSNDGGVGALLGHGFGSHFYGGISPVAPGILYLRMYRALRDT 1081
Query: 781 MFMKEEILSILMHCVRDIASCGLPREKLEKLKKTKHGMRYGQVSXXXXXXXXXXXXXXGA 840
+ + EEILS+L+H V DIA L +EKLEKLK K+G RYGQ S A
Sbjct: 1082 VSVSEEILSLLIHSVEDIAQNRLSKEKLEKLKTVKNGSRYGQSSLATAMTQVKLAASLSA 1141
Query: 841 SLVWISGGSSLVHSLLTETLPSWFISVHGLVQEGGESGCMVGMLGGYALAYFAVFCATFA 900
SLVW++GG +VH L+ ET+PSWF+S +E G S +V L G+ALAYF V C
Sbjct: 1142 SLVWLTGGLGVVHVLIKETIPSWFLSTDKSDREQGPSD-LVAELRGHALAYFVVLCGALT 1200
Query: 901 WGVDSESRASKKR-PTVLGTHLEFLASALDRKISVGCDCATWRAYVSGFVTLIVGCTPTW 959
WGVDS S ASK+R +LG+HLEF+ASALD KISVGC+ ATWR Y+SG V+L+V C P W
Sbjct: 1201 WGVDSRSSASKRRRQAILGSHLEFIASALDGKISVGCETATWRTYISGLVSLMVSCLPLW 1260
Query: 960 MLEINVDALKRLSKGLRQWDEEE 982
+ EI+ + LK LS GLR+W ++E
Sbjct: 1261 VTEIDTEVLKSLSNGLRKWGKDE 1283
Score = 473 (171.6 bits), Expect = 2.6e-41, P = 2.6e-41
Identities = 100/189 (52%), Positives = 123/189 (65%)
Query: 40 VNGTTWHDTFLGLWIAALRLLQRERDPSEGPVPRIDSSLCMVLSVTTLTVADXXXXXXXX 99
+NG+TWHDTFLGLWIAALRL+QRERDP EGP+PR+D+ LCM L + L VA+
Sbjct: 359 INGSTWHDTFLGLWIAALRLVQRERDPIEGPIPRLDTRLCMSLCIVPLVVANLIEEG--- 415
Query: 100 XXXXXXQSPSNLPKDKQAPGRRRKDLVTSLQLLGDFEDMLTPPPFVRSIANQAAAKAIMF 159
K + + R DLVTSLQ+LGDF +L PP V S AN+AA KAI+F
Sbjct: 416 -------------KYESVMEKLRDDLVTSLQVLGDFPGLLAPPKCVVSAANKAATKAILF 462
Query: 160 ISGLTVGNGYYESVSMNGLATSCLGNMRHLIVEACIARNLLDTSAYLWPGYVNA------ 213
+SG VG ++ ++M + +C GNMRHLIVEACIARN+LD SAY WPGYVN
Sbjct: 463 LSGGNVGKSCFDVINMKDMPVNCSGNMRHLIVEACIARNILDMSAYSWPGYVNGRINQIP 522
Query: 214 -SDSNQVPC 221
S N+VPC
Sbjct: 523 QSLPNEVPC 531
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.134 0.415 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1008 879 0.00085 122 3 11 22 0.37 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 2
No. of states in DFA: 628 (67 KB)
Total size of DFA: 444 KB (2209 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 62.44u 0.65s 63.09t Elapsed: 00:00:04
Total cpu time: 62.44u 0.65s 63.09t Elapsed: 00:00:04
Start: Tue May 21 02:20:27 2013 End: Tue May 21 02:20:31 2013