BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001831
(1008 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P45181|PQQL_HAEIN Probable zinc protease PqqL OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=pqqL PE=3 SV=1
Length = 926
Score = 237 bits (605), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 210/846 (24%), Positives = 381/846 (45%), Gaps = 52/846 (6%)
Query: 35 PF--GVDYGRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSA 92
PF + +G+L NGL Y+V N++P+ R + L + AGS+ E++ ++G+AH+VEH+AF+
Sbjct: 29 PFDPNIQHGKLSNGLQYFVLKNTEPKERVYIRLVINAGSMHEDDDQKGIAHLVEHMAFNG 88
Query: 93 TEKYTNHDIIKFLESIGAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTE 152
++KY + II LE +G +F NA T + TVY L + + + L A V+ E+
Sbjct: 89 SKKYPENQIINALEKLGMKFARDINAFTDFENTVYTLNLDSNNQQKLELAFDVINEWMNN 148
Query: 153 VRVSKDDLEKERGAVLEEYRGNRNASGRMQDAHWVLMMEGSKYAECLPIGLEKVIRTVSS 212
+ D++ ERG V EE+R + R+ + + M GS+Y PIG +I+T+S+
Sbjct: 149 ITFLPKDVDGERGVVQEEWRRRLSPMLRIGNKKSAIEMAGSRYVLRDPIGDMDIIKTISA 208
Query: 213 DTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPPVIP-KFPVPSHQ 271
V FY KWYR NM+VI VGD DTK VV+L+ + Q+ T + F +P
Sbjct: 209 KRVADFYHKWYRPDNMSVIIVGDI-DTKQVVKLLKQNLSQENPITKTTLEKIDFNIPLIN 267
Query: 272 EPRFSCFIESEAGGSAVIVSYKMPVNELKTIKDYKEMLTESMFLHALNQRFFKLSRRKDP 331
+ R E ++ +S+ E T+ YK+ L + + LN R + + +
Sbjct: 268 KWRLDSISEQGTTIPSIELSFFENTIETNTLASYKQELIQQITTRLLNLRLQQWEKETEN 327
Query: 332 PYFSCSASADDLVRPLKAYIMSSSCKERGTLKALESMLIEVARVRLHGFSEREVS--VAR 389
S + L + I S + K ++ + +A ++ GF++ E+S + R
Sbjct: 328 GVDSANFYRTHLGKETLQSIFSLQLIDTQYSKTIDKLFAFIASIKQQGFTQNELSGEIKR 387
Query: 390 ALLMSEVESAYLERDQMQSTNLR--DECLQHFLCKEPIIGIEYEARLQKTLLPHISALEV 447
++E ++ ++S +L+ D+ + K+ ++ + L K L I+ ++
Sbjct: 388 LTQLNE------KQLNIRSGSLKIADDLITSVANKQVVLSVNDRYELNKRFLSQITLADL 441
Query: 448 SRYSEKLQTSCSCVIKTIEPQTFSTID-DLKNIVLKIKNLEEKNISPWDEENIPEEIVST 506
R + + ++ +P + D+ I + N+ E WDE+ E++
Sbjct: 442 QRTLNQTLALKAKLLLITQPLPQKALPFDVAEIETRWNNVMEMQQHQWDEKKQIEKLPHL 501
Query: 507 KPSPGNIVQQFEYENLGATELVLSNGMRVCYKCTDFLDDQVLFTGFSYGGLSELPESEYL 566
+ G++ Q+ ++ E LSNG ++ Y +D +QV F + GGL +P +Y
Sbjct: 502 TFNTGSLSQEKYWDRGDIYEFRLSNGSKLIYHYSDKTPNQVHFRAVTQGGLRSIPNKDYH 561
Query: 567 SCSMGSTIAGEIGVFGYRPSMLMDMLAGKRVEGGTKVGAYMRTFSGDCSPSDLETALQLV 626
++ E GV S + + + + T + + F+G P DLE L L
Sbjct: 562 LLRAAVSVVDETGVGELSLSAVNQIFSRDPLVIATVIDDDKQGFTGVSKPKDLENLLTLF 621
Query: 627 YQLFTTNVAPGEEEVEIVMQMAEEVIRAQERDPY------TAFANRVKEINYGNSYFFRP 680
+P + +A E R + RD + T F V ++ + N
Sbjct: 622 R--LKLRSSP-------ISDLALEKYRRETRDYFKQIDLETQFMQAVSKLRFPNIETVYT 672
Query: 681 IRISDLQKVDPLKACDYFNSCFKDPSTFTVVIVGNIDPSNGIPLILQYLGGIPKPPEPIL 740
+ + D + + + D + FT I+G+I+ + L +YL I + I
Sbjct: 673 QKQAQQLSFDKNQLNNAYQHYILDKTDFTYFIIGDIELNQVKKLAERYLASIESKTQ-IR 731
Query: 741 HFNRDNLKGLPFTFPSSIIREVVRSPMVEAQCSVQLCFPVELKNGTMVEEINYVGFLSKL 800
HF +P T + + + + + E + V++ + N E+ L+ +
Sbjct: 732 HF-------VP-TIIHTPTQSFIMNGLKEPRADVEIYLTAD--NTWRTEQKYLFNILADI 781
Query: 801 LETKMMQVLRFKHGQIYSASVSVFLGGNKHSRTGDVRGDISINFSCDP----EISFKLVD 856
++ K+ +LR K IYS + S F+ + + G I FSCDP E+++ L +
Sbjct: 782 VQEKLRLILREKVSGIYSVN-SWFM---QDVYAPQIEG--KIEFSCDPKRVEELTY-LTN 834
Query: 857 LALDEI 862
LD+I
Sbjct: 835 QVLDDI 840
>sp|P31828|PQQL_ECOLI Probable zinc protease PqqL OS=Escherichia coli (strain K12)
GN=pqqL PE=3 SV=2
Length = 931
Score = 212 bits (540), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 211/880 (23%), Positives = 385/880 (43%), Gaps = 79/880 (8%)
Query: 41 GRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHD 100
G+LDNGL Y + ++ P+ + L L + GS+ EE++E GVAH VEH+ F+ T+ + +
Sbjct: 38 GQLDNGLRYMIYPHAHPKDQVNLWLQIHTGSLQEEDNELGVAHFVEHMMFNGTKTWPGNK 97
Query: 101 IIKFLESIGAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDL 160
+I+ ES+G FG NA TS DETVY++ +P + + L + +++ +E+S K ++
Sbjct: 98 VIETFESMGLRFGRDVNAYTSYDETVYQVSLPTTQKQNLQQVMAIFSEWSNAATFEKLEV 157
Query: 161 EKERGAVLEEYRGNRNASGRMQDAHWVLMMEGSKYAECLPIGLEKVIRTVSSDTVKRFYQ 220
+ ERG + EE+R +++A R A ++ ++ + PIGL + TV+ +++FYQ
Sbjct: 158 DAERGVITEEWRAHQDAKWRTSQARRPFLLANTRNLDREPIGLMDTVATVTPAQLRQFYQ 217
Query: 221 KWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPPVIPKFPVPSHQEPRFSCFIE 280
+WY+ NM I VGD D+K + LI + K A +P + RF+ +
Sbjct: 218 RWYQPNNMTFIVVGDI-DSKEALALIKDNLS-KLPANKAAENRVWPTKAENHLRFNIIND 275
Query: 281 SEAGGSAVIVSYKMPVNELKTIKDYKEMLTESMFLHALNQRFFKLSRRKDPPYFSCSASA 340
E + + + Y++P+ ++ + + E SM + NQR + + + S +
Sbjct: 276 KENRVNGIALYYRLPMVQVNDEQSFIEQAEWSMLVQLFNQRLQERIQSGELKTISGGTAR 335
Query: 341 DDLVRP-LKAYIMSSSCKERGTLKALESMLIEVARVRLHGFSEREVSVARALLMSEVESA 399
+ P ++ + ++ A +++ E+A + HGFS E+ ++ ++ +++A
Sbjct: 336 SVKIAPDYQSLFFRVNARDDNMQDAANALMAELATIDQHGFSAEELDDVKSTRLTWLKNA 395
Query: 400 YLERDQMQSTNLR---DECLQHFLCKEPIIGIEYEARLQKTLLPHISALEVSR------- 449
DQ +LR L P + E +L K L I+ ++
Sbjct: 396 V---DQQAERDLRMLTSRLASSSLNNTPFLSPEETYQLSKRLWQQITVQSLAEKWQQLRK 452
Query: 450 ----YSEKLQTSCSCVIKTIEPQTFSTID-DLKNIVLKIKNLEEKNISPWDEENIPEEIV 504
+ E++ + K + P ++ + N L +N+S + + P+ +
Sbjct: 453 NQDAFWEQMVNNEVAAKKALSPAAILALEKEYANKKLAAYVFPGRNLSLTVDAD-PQAEI 511
Query: 505 STKPSPGNIVQQFEYENLGATELVLSNGMRVCYKCTDFLDDQVLFTGFSYGGLSELPESE 564
S+K + ENL T L LSNG RV + + ++ S G P +
Sbjct: 512 SSKETLA--------ENL--TSLTLSNGARVILAKSAGEEQKLQIIAVSNKGDLSFPAQQ 561
Query: 565 YLSCSMGSTIAGEIGVFGYRPSMLMDMLAGKRVEGGTKVGAYMRTFSGDCSPSDLETALQ 624
++ + GV S L A V +KV S ++ E Q
Sbjct: 562 KSLIALANKAVSGSGVGELSSSSLKRWSAENSVTMSSKVSGMNTLLSVSARTNNPEPGFQ 621
Query: 625 LVYQLFTTNVAPGEEEVEIVMQMAE-EVIRAQERDPYTAFANRVKEINYGN--SYFFRPI 681
L+ Q T + + + +Q A+ + ++ ++ P FA ++ E Y + + +
Sbjct: 622 LINQRITHSTI--NDNIWASLQNAQIQALKTLDQRPAEKFAQQMYETRYADDRTKLLQEN 679
Query: 682 RISDLQKVDPLKACDYFNSCFKDPSTFTVVIVGNIDPSNGIPLILQYLGGIPKPPEPILH 741
+I+ D L A F P+ T VIVGN+ + LI +YLG I P+
Sbjct: 680 QIAQFTAADALAAD---RQLFSSPADITFVIVGNVAEDKLVALITRYLGSIKHSDSPL-- 734
Query: 742 FNRDNLKGLPFTFPS---SIIREVVRSPMVEAQCSVQLCF----PVELKNGTMVEEINYV 794
G P T + S+ + P+ AQ S + PV L ++ N
Sbjct: 735 -----AAGKPLTRATDNASVTVKEQNEPV--AQVSQWKRYDSRTPVNLPTRMALDAFNVA 787
Query: 795 GFLSKLLETKMMQVLRFKHGQIYSASVSVFLGGNKHSRTGDVRGDIS--INFSCDPEISF 852
L+K L +R + Y SVS L + ++ DIS + F+C PE
Sbjct: 788 --LAKDLRVN----IREQASGAY--SVSSRLSVDPQAK------DISHLLAFTCQPERHD 833
Query: 853 KLVDLALDEISRLQKEGPSD-------EDVSTILELEQRA 885
+L+ LA + + + +G S+ ++V L+++QR+
Sbjct: 834 ELLTLANEVMVKRLAKGISEQELNEYQQNVQRSLDIQQRS 873
>sp|O86835|Y5738_STRCO Uncharacterized zinc protease SCO5738 OS=Streptomyces coelicolor
(strain ATCC BAA-471 / A3(2) / M145) GN=SCO5738 PE=3
SV=1
Length = 459
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 99/226 (43%), Gaps = 11/226 (4%)
Query: 57 PRMRAA-LALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDIIKFLESIGAEFGAC 115
P +R+A + GS E G H +EHL F T K + DI ++++G E
Sbjct: 52 PSVRSATFGIWAHVGSRDETPALNGATHYLEHLLFKGTRKRSALDISSAIDAVGGEM--- 108
Query: 116 QNAVTSADETVYELFV-PVDKPELLSRAISVLAEFSTEVRVSKDDLEKERGAVLEEYRGN 174
NA T+ + T Y V D P AI V+ + T + ++D++ ERGA+LEE
Sbjct: 109 -NAFTAKEYTCYYARVLDTDLP----LAIDVVCDMLTGSLIQEEDVDVERGAILEEIAMT 163
Query: 175 RNASGRMQDAHWVLMMEGSKYAECLPIGLEKVIRTVSSDTVKRFYQKWYRLQNMAVIAVG 234
+ G + M G +G + +++D ++RFY+K Y ++ V A G
Sbjct: 164 EDDPGDCVHDLFAHTMFGDNALGRPVLGTVDTVNALTADRIRRFYRKHYDPTHLVVAAAG 223
Query: 235 DFPDTKGVVELINTHFGQKKSATDPPVIPKFPVPSHQEPRFSCFIE 280
+ K VV + F + + DP P P + R + +E
Sbjct: 224 NVDHNK-VVRQVRAAFEKSGALKDPAAQPLAPRAGRRTVRAAGRVE 268
>sp|P37648|YHJJ_ECOLI Protein YhjJ OS=Escherichia coli (strain K12) GN=yhjJ PE=1 SV=1
Length = 498
Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 100/230 (43%), Gaps = 12/230 (5%)
Query: 41 GRLDNGLFYYVRCN-SKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNH 99
G L NGL + V +P R + L V GS+ E + G +H + +A + +
Sbjct: 36 GTLSNGLQWQVLTTPQRPSDRVEIRLLVNTGSLAESTQQSGYSHAIPRIALTQSGGLDAA 95
Query: 100 DIIKFLESIGAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDD 159
+ + S D T++ L +P ++ +LL A+S LA + ++ ++ +
Sbjct: 96 QARSLWQQGIDPKRPMPPVIVSYDTTLFNLSLPNNRNDLLKEALSYLANATGKLTITPET 155
Query: 160 LEKERGAVLEEYRGNRNASGRMQDAHWVLMMEGSKYAECLPIGLEKVIRTVSSDTVKRFY 219
+ L+ ++ W ++GS P + + + V ++ +K FY
Sbjct: 156 INH----ALQSQDMVATWPADTKEGWWRYRLKGSTLLGHDPA--DPLKQPVEAEKIKDFY 209
Query: 220 QKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPPVIPKFPVPS 269
QKWY M ++ VG+ D + VV+ IN FG+ K + P PVP+
Sbjct: 210 QKWYTPDAMTLLVVGNV-DARSVVDQINKTFGELKGKRETPA----PVPT 254
>sp|P50335|YHJJ_SALTY Protein YhjJ OS=Salmonella typhimurium (strain LT2 / SGSC1412 /
ATCC 700720) GN=yhjJ PE=3 SV=2
Length = 495
Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 104/441 (23%), Positives = 182/441 (41%), Gaps = 36/441 (8%)
Query: 41 GRLDNGLFYYVRCN-SKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNH 99
G L NGL + V +P R + L V GS+ E + G +H + +A + +
Sbjct: 36 GTLANGLQWQVLATPQRPSDRIEVRLQVNTGSLTESTQQSGFSHAIPRIALTQSGGLDAA 95
Query: 100 DIIKFLESIGAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDD 159
+ + S D T+Y L +P ++ +LL A++ LA S ++ ++ +
Sbjct: 96 QARSLWQQGFDPKRPMPPVIVSYDSTLYNLSLPNNRNDLLKEALTYLANVSGKLTITPET 155
Query: 160 LEKERGAVLEEYRGNRNASGRMQDAHWVLMMEGSKYAECLPIGLEKVIRTVSSDTVKRFY 219
+ + E+ A + + W ++GS P E + + V + ++ FY
Sbjct: 156 VNHALSS--EDMVATWPADTK--EGWWRYRLKGSALLGHDPA--EPLKQPVDAAKIQAFY 209
Query: 220 QKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPPVIPKFPVPSHQEPRF-SCF 278
+KWY M +I VG+ D + V E IN FG K + P PVP+ R S
Sbjct: 210 EKWYTPDAMTLIVVGNI-DARSVAEQINKTFGTLKGKRETPA----PVPTLSPLRAESVS 264
Query: 279 IESEAGG----SAVIVSYKMPVNELKTIKDY--KEMLTESMFLHALNQRFFKLSRRKDPP 332
I ++A S + + P+ E + Y ++ E++F H + Q K + +
Sbjct: 265 IMTDAVRQDRLSIMWDTPWQPIRESAALLRYWQADLAREALFWH-IQQELTKNNAKDIGL 323
Query: 333 YFSCSASADDLVRPLKAYIMSSSCKERGTLKALESMLIEVARVRLHGFSEREVSVARA-- 390
F C +R A + S + T L + E+A+VR G SE E + A
Sbjct: 324 GFDCRVL---FLRAQCAINIESPNDKLNT--NLSLVANELAKVRDKGLSEEEFTALVAQK 378
Query: 391 -LLMSEVESAYLERDQMQSTNLRDECLQHFLCKEPIIGIEYEARLQKTLLPHISALEVSR 449
L + ++ + Y D T R LQ+ + I E +L++ L ++L V
Sbjct: 379 NLELQKLFATYARTDTDILTGQRMRSLQNQVVD---IAPEQYQKLRQNFL---NSLTVDM 432
Query: 450 YSEKL--QTSCSCVIKTIEPQ 468
++ L Q S + ++PQ
Sbjct: 433 LNQNLRQQLSQEMALILLQPQ 453
>sp|Q8Z286|YHJJ_SALTI Protein YhjJ OS=Salmonella typhi GN=yhjJ PE=3 SV=1
Length = 495
Score = 70.1 bits (170), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 104/441 (23%), Positives = 182/441 (41%), Gaps = 36/441 (8%)
Query: 41 GRLDNGLFYYVRCN-SKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNH 99
G L NGL + V +P R + L V GS+ E + G +H + +A + +
Sbjct: 36 GTLANGLQWQVLATPQRPSDRIEVRLQVNTGSLTESTQQSGFSHAIPRIALTQSGGLDAA 95
Query: 100 DIIKFLESIGAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDD 159
+ + S D T+Y L +P ++ +LL A++ LA S ++ ++ +
Sbjct: 96 QARSLWQQGFDPKRPMPPVIVSYDSTLYSLSLPNNRNDLLKEALTYLANVSGKLTITPET 155
Query: 160 LEKERGAVLEEYRGNRNASGRMQDAHWVLMMEGSKYAECLPIGLEKVIRTVSSDTVKRFY 219
+ + E+ A + + W ++GS P E + + V + ++ FY
Sbjct: 156 VNHALSS--EDMVATWPADTK--EGWWRYRLKGSALLGHDPA--EPLKQPVDAAKIQAFY 209
Query: 220 QKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPPVIPKFPVPSHQEPRF-SCF 278
+KWY M +I VG+ D + V E IN FG K + P PVP+ R S
Sbjct: 210 EKWYTPDAMTLIVVGNI-DARSVAEQINKTFGTLKGKRETPA----PVPTLSPLRAESVS 264
Query: 279 IESEAGG----SAVIVSYKMPVNELKTIKDY--KEMLTESMFLHALNQRFFKLSRRKDPP 332
I ++A S + + P+ E + Y ++ E++F H + Q K + +
Sbjct: 265 IMTDAVRQDRLSIMWDTPWQPIRESAALLRYWQADLAREALFWH-IQQELTKNNAKDIGL 323
Query: 333 YFSCSASADDLVRPLKAYIMSSSCKERGTLKALESMLIEVARVRLHGFSEREVSVARA-- 390
F C +R A + S + T L + E+A+VR G SE E + A
Sbjct: 324 GFDCRVL---FLRAQCAINIESPNDKLNT--NLSLVANELAKVRDKGLSEEEFTALVAQK 378
Query: 391 -LLMSEVESAYLERDQMQSTNLRDECLQHFLCKEPIIGIEYEARLQKTLLPHISALEVSR 449
L + ++ + Y D T R LQ+ + I E +L++ L ++L V
Sbjct: 379 NLELQKLFATYARTDTDILTGQRMRSLQNQVVD---IAPEQYQKLRQNFL---NSLTVDM 432
Query: 450 YSEKL--QTSCSCVIKTIEPQ 468
++ L Q S + ++PQ
Sbjct: 433 LNQNLRQQLSQEMALILLQPQ 453
>sp|P31800|QCR1_BOVIN Cytochrome b-c1 complex subunit 1, mitochondrial OS=Bos taurus
GN=UQCRC1 PE=1 SV=2
Length = 480
Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 104/229 (45%), Gaps = 20/229 (8%)
Query: 42 RLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDI 101
+LDNGL +S+P + + + AGS E E G + VEHLAF T+ + +
Sbjct: 52 QLDNGLRVASEQSSQPT--CTVGVWIDAGSRYESEKNNGAGYFVEHLAFKGTKNRPGNAL 109
Query: 102 IKFLESIGAEFGACQNAVTSADETVYEL-FVPVDKPELLSRAISVLAEFSTEVRVSKDDL 160
K +ES+GA NA ++ + T Y + + D P +A+ +LA+ + +
Sbjct: 110 EKEVESMGAHL----NAYSTREHTAYYIKALSKDLP----KAVELLADIVQNCSLEDSQI 161
Query: 161 EKERGAVLEEYRGNRNASGRMQDAHW----VLMMEGSKYAECLPIGLEKVIRTVSSDTVK 216
EKER +L+E + N + M+D + +G+ A+ + G + +R +S +
Sbjct: 162 EKERDVILQELQENDTS---MRDVVFNYLHATAFQGTPLAQSVE-GPSENVRKLSRADLT 217
Query: 217 RFYQKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPPVIPKF 265
+ + Y+ M + A G + + +++L HF D +P
Sbjct: 218 EYLSRHYKAPRMVLAAAGGL-EHRQLLDLAQKHFSGLSGTYDEDAVPTL 265
>sp|Q9Y8B5|MPPB_LENED Mitochondrial-processing peptidase subunit beta OS=Lentinula edodes
GN=mppB PE=3 SV=1
Length = 466
Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 123/269 (45%), Gaps = 31/269 (11%)
Query: 22 LVSFDLNEELGEQPFGVDYGRLDNGLFYYVRCNSKPRMRAA-LALAVKAGSVLEEEHERG 80
L SF LG PF + L NGL V S+P + A + + + AGS E + G
Sbjct: 16 LRSFATTTNLG--PF-TEISTLSNGL--TVATESQPHAQTATVGVWIDAGSRAETDKTNG 70
Query: 81 VAHIVEHLAFSATEKYTNHDIIKFLESIGAEFGACQNAVTSADETVY--ELF---VPVDK 135
AH +EH+AF T + + H + +E+IGA NA TS ++TVY + F VPV
Sbjct: 71 TAHFLEHMAFKGTGRRSQHALELEVENIGAHL----NAYTSREQTVYYAKSFSKDVPV-- 124
Query: 136 PELLSRAISVLAEFSTEVRVSKDDLEKERGAVLEEYRG-NRNASGRMQDAHWVLMMEGSK 194
A+ ++++ ++ +E+ER +L E + ++ + D + +G
Sbjct: 125 ------AVDIISDILQNSKLESGAIERERDVILREQQEVDKQLEEVVFDHLHAVAFQGQP 178
Query: 195 YAECLPIGLEKVIRTVSSDTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKK 254
+ +G + I ++ D + + Q Y M ++ G D + +V+L HF
Sbjct: 179 LGRTI-LGPKNNILSIQRDDLASYIQTNYTADRMVLVGTGGV-DHQSLVKLAEKHFSSLP 236
Query: 255 SATDPPVIPKFPVPSHQEPRFSCFIESEA 283
+ +P + + + S ++P F+ SEA
Sbjct: 237 VSANPLALGR--LSSERKP---TFVGSEA 260
>sp|P0A5S9|Y2805_MYCBO Uncharacterized zinc protease Mb2805c OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=Mb2805c PE=3 SV=1
Length = 438
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 8/204 (3%)
Query: 61 AALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDIIKFLESIGAEFGACQNAVT 120
A++ + V GS E G AH +EHL F +T + DI + ++++G E NA T
Sbjct: 37 ASVGVWVGVGSRDEGATVAGAAHFLEHLLFKSTPTRSAVDIAQAMDAVGGEL----NAFT 92
Query: 121 SADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEKERGAVLEEYRGNRNASGR 180
+ + T Y V L A+ ++A+ R + DD+E ER VLEE +
Sbjct: 93 AKEHTCYYAHVLGSDLPL---AVDLVADVVLNGRCAADDVEVERDVVLEEIAMRDDDPED 149
Query: 181 MQDAHWVLMMEGSKYAECLPIGLEKVIRTVSSDTVKRFYQKWYRLQNMAVIAVGDFPDTK 240
++ + G IG + + ++ ++ F+ + Y + M V A G+ D
Sbjct: 150 ALADMFLAALFGDHPVGRPVIGSAQSVSVMTRAQLQSFHLRRYTPERMVVAAAGNV-DHD 208
Query: 241 GVVELINTHFGQKKSATDPPVIPK 264
G+V L+ HFG + PV P+
Sbjct: 209 GLVALVREHFGSRLVRGRRPVAPR 232
>sp|P0A5S8|Y2782_MYCTU Uncharacterized zinc protease Rv2782c/MT2852 OS=Mycobacterium
tuberculosis GN=Rv2782c PE=3 SV=1
Length = 438
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 8/204 (3%)
Query: 61 AALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDIIKFLESIGAEFGACQNAVT 120
A++ + V GS E G AH +EHL F +T + DI + ++++G E NA T
Sbjct: 37 ASVGVWVGVGSRDEGATVAGAAHFLEHLLFKSTPTRSAVDIAQAMDAVGGEL----NAFT 92
Query: 121 SADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEKERGAVLEEYRGNRNASGR 180
+ + T Y V L A+ ++A+ R + DD+E ER VLEE +
Sbjct: 93 AKEHTCYYAHVLGSDLPL---AVDLVADVVLNGRCAADDVEVERDVVLEEIAMRDDDPED 149
Query: 181 MQDAHWVLMMEGSKYAECLPIGLEKVIRTVSSDTVKRFYQKWYRLQNMAVIAVGDFPDTK 240
++ + G IG + + ++ ++ F+ + Y + M V A G+ D
Sbjct: 150 ALADMFLAALFGDHPVGRPVIGSAQSVSVMTRAQLQSFHLRRYTPERMVVAAAGNV-DHD 208
Query: 241 GVVELINTHFGQKKSATDPPVIPK 264
G+V L+ HFG + PV P+
Sbjct: 209 GLVALVREHFGSRLVRGRRPVAPR 232
>sp|P43264|QCR1_EUGGR Ubiquinol-cytochrome-c reductase complex core protein I,
mitochondrial OS=Euglena gracilis PE=2 SV=1
Length = 494
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 25/226 (11%)
Query: 43 LDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDII 102
L NG + + SK + + + AGS E E GVAH +EH+ F T K + DI
Sbjct: 32 LPNG--FRIASESKDGDTCTVGVWIDAGSRWETEKNNGVAHFLEHMNFKGTGKRSRQDIE 89
Query: 103 KFLESIGAEFGACQNAVTSADETVYEL-FVPVDKPELLSRAISVLAEFSTEVRVSKDDLE 161
+E +GA NA TS + T Y + D PE A+ +LA+ + ++ DL+
Sbjct: 90 FGMEKMGAHL----NAYTSREHTCYYVKCFKKDVPE----AVDILADILLNSKRTEQDLD 141
Query: 162 KERGAVLEEYRGNRNASGRMQDAHWVLM-------MEGSKYAECLPIGLEKVIRTVSSDT 214
ER +++E + R+ + VLM EGS + LE + ++++
Sbjct: 142 AERQTIVQE---KEDVEARIDE---VLMDHLHSAAFEGSGLGLSILGPLENIQKSITKGM 195
Query: 215 VKRFYQKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPP 260
+ F + Y MA++ G D + +L + +FG + P
Sbjct: 196 IDDFVKTHYTGPRMALVGSGAV-DHGQLCDLASKYFGALPTGQPKP 240
>sp|O94745|MPPA_SCHPO Probable mitochondrial-processing peptidase subunit alpha
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=mas2 PE=3 SV=2
Length = 502
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 116/243 (47%), Gaps = 16/243 (6%)
Query: 42 RLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDI 101
+L NG+ Y C+ +P + L + VKAGS E + GV+H ++ LAF ATE+ ++
Sbjct: 58 KLKNGVTYV--CDPRPGHFSGLGVYVKAGSRYETKKFSGVSHFMDRLAFQATERTPVGEM 115
Query: 102 IKFLESIGAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLE 161
LE++G + C TS + +Y+ V D + +S+ +LAE ++ +DDL
Sbjct: 116 KAKLENLGGNY-MCS---TSRESMIYQAAVFNDDVKSMSK---LLAETVLAPKIQEDDLV 168
Query: 162 KERGAVL-EEYRGNRNASGRMQDAHWVLMMEGSKYAECLPIGLEKVIRTVSSDTVKRFYQ 220
R +++ E + + V + + CL +KV +++ +++ + +
Sbjct: 169 HYRDSIIYENSELWTKPDALLGEFAHVTAFQNNTLGNCLLCTPDKV-NGITATSIREYLK 227
Query: 221 KWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPPVIPKFPVPSHQEPRFSCFIE 280
+YR +++ +A P + E+ +G S++ PP+ +PSH F +
Sbjct: 228 YFYRPEHL-TLAYAGIPQ-EIAKEITKELYGHLPSSSLPPL---EAIPSHYTGGFMGIKK 282
Query: 281 SEA 283
SEA
Sbjct: 283 SEA 285
>sp|Q3SZ71|MPPB_BOVIN Mitochondrial-processing peptidase subunit beta OS=Bos taurus
GN=PMPCB PE=2 SV=1
Length = 490
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 104/227 (45%), Gaps = 17/227 (7%)
Query: 43 LDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDII 102
L+NGL V + L + AGS E E G AH +EH+AF T+K + D+
Sbjct: 64 LENGL--RVASEDSGLATCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQLDLE 121
Query: 103 KFLESIGAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEK 162
+E++GA NA TS ++TVY + + L RA+ +LA+ + + ++E+
Sbjct: 122 LEIENMGAHL----NAYTSREQTVY--YAKAFSKD-LPRAVEILADIIQNSTLGEAEIER 174
Query: 163 ERGAVLEEYRGNRNASGRMQDAHWVLMMEGSKYAECLP---IGLEKVIRTVSSDTVKRFY 219
ERG +L E + +Q+ + + + L +G + I++++ + +
Sbjct: 175 ERGVILREM---QEVETNLQEVVFDYLHATAYQNTALGRTILGPTENIKSINRKDLVDYI 231
Query: 220 QKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPPVIPKFP 266
Y+ + + A G + ++EL HFG+ S T IP P
Sbjct: 232 TTHYKGPRIVLAAAGGVSHDE-LLELAKFHFGESLS-THKGEIPALP 276
>sp|Q03346|MPPB_RAT Mitochondrial-processing peptidase subunit beta OS=Rattus
norvegicus GN=Pmpcb PE=1 SV=3
Length = 489
Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 97/206 (47%), Gaps = 16/206 (7%)
Query: 63 LALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDIIKFLESIGAEFGACQNAVTSA 122
+ L + AGS E E G AH +EH+AF T+K + D+ +E++GA NA TS
Sbjct: 81 VGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQLDLELEIENMGAHL----NAYTSR 136
Query: 123 DETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEKERGAVLEEYRGNRNASGRMQ 182
++TVY + + L RA+ +LA+ + + ++E+ERG +L E + +Q
Sbjct: 137 EQTVY--YAKAFSKD-LPRAVEILADIIQNSTLGEAEIERERGVILREM---QEVETNLQ 190
Query: 183 DAHWVLMMEGSKYAECLP---IGLEKVIRTVSSDTVKRFYQKWYRLQNMAVIAVGDFPDT 239
+ + + + L +G + I+++S + + Y+ + + A G
Sbjct: 191 EVVFDYLHATAYQNTALGRTILGPTENIKSISRKDLVDYITTHYKGPRIVLAAAGGVCHN 250
Query: 240 KGVVELINTHFGQKKSA--TDPPVIP 263
+ ++EL HFG A D P +P
Sbjct: 251 E-LLELAKFHFGDSLCAHKGDVPALP 275
>sp|Q5UPX9|YL233_MIMIV Putative zinc protease L233 OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_L233 PE=3 SV=1
Length = 440
Score = 63.5 bits (153), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 81/179 (45%), Gaps = 12/179 (6%)
Query: 61 AALALAVKAGSVLE-EEHERGVAHIVEHLAFSATEKYTNHDIIKFLESIGAEFGACQNAV 119
A+ V GS E ++ G++H +EH+ F T ++ ++ L+S GA + NA+
Sbjct: 26 VAMGFYVGVGSRNEFGAYKNGISHFLEHMMFKRTTNKSSDELFSELDSTGANY----NAI 81
Query: 120 TSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEKERGAVLEEY--RGNRNA 177
T+ T Y L + + + ++ + DD+E+ER ++EE R ++
Sbjct: 82 TTTQNTCYFL---SGNSNYIDKLLDIMLDIFLHPNFVSDDIERERKVIMEEMKIRADQPQ 138
Query: 178 SGRMQDAHWVLMMEGSKYAECLPIGLEKVIRTVSSDTVKRFYQKWYRLQNMAVIAVGDF 236
S H V S + IG + I+ + + +++FY +YR N I G+F
Sbjct: 139 SSMTYQIHEVYFKNTSLSQKV--IGSIESIKNIDKNDLEKFYSTFYRPNNTIFIMAGNF 195
>sp|O05945|Y219_RICPR Uncharacterized zinc protease RP219 OS=Rickettsia prowazekii
(strain Madrid E) GN=RP219 PE=3 SV=1
Length = 412
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 126/290 (43%), Gaps = 20/290 (6%)
Query: 42 RLDNGLFYYVRCNSKPRMRA-ALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHD 100
+L NGL + + P + + A+ L K G+ E E E G++H +EH+AF T+ T
Sbjct: 9 KLKNGL--TILTYNMPYVHSVAINLIAKVGARYENEEEEGISHFLEHMAFKGTKTRTAQQ 66
Query: 101 IIKFLESIGAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDL 160
I + +SIG F NA T + TVY V E +A+++LA+ + +++
Sbjct: 67 IAEEFDSIGGYF----NAYTGHENTVYYARVL---SENCHKALNILADIIQNSIFADEEI 119
Query: 161 EKERGAVLEEYRGNR-NASGRMQDAHWVLMMEGSKYAECLPIGLEKVIRTVSSDTVKRFY 219
KE +++E + N + + + + +G + + +G K + T + + F
Sbjct: 120 AKEYQIIMQEIAHHHDNPDDLIYETFYNTVYKGQPLGKSI-LGTTKTLVTFTKEHFLNFI 178
Query: 220 QKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPPVIPKFPVPSHQEPRFSCFI 279
K Y +N+ + G+ K +V + F K IP + FI
Sbjct: 179 GKHYNAENLYLSIAGNIEHNK-IVMIAEELFASLKQGVKSSFIPAKYIGG------KGFI 231
Query: 280 ESEAGGSAVIVSYKMPVNELKTIKDYKEMLTESMFLHALNQRFFKLSRRK 329
E +++++ ++ + + + Y+ L +F ++ R F+ R K
Sbjct: 232 HKELEQTSLVLGFECT-SYINLGQLYQTYLLSIIFGGGMSSRLFQSIREK 280
>sp|Q5REK3|MPPB_PONAB Mitochondrial-processing peptidase subunit beta OS=Pongo abelii
GN=PMPCB PE=2 SV=1
Length = 489
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 60/108 (55%), Gaps = 7/108 (6%)
Query: 63 LALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDIIKFLESIGAEFGACQNAVTSA 122
+ L + AGS E E G AH +EH+AF T+K + D+ +E++GA NA TS
Sbjct: 81 VGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQLDLELEIENMGAHL----NAYTSR 136
Query: 123 DETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEKERGAVLEE 170
++TVY + + L RA+ +LA+ + + ++E+ERG +L E
Sbjct: 137 EQTVY--YAKAFSKD-LPRAVEILADIIQNSTLGEAEIERERGVILRE 181
>sp|Q9CXT8|MPPB_MOUSE Mitochondrial-processing peptidase subunit beta OS=Mus musculus
GN=Pmpcb PE=2 SV=1
Length = 489
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 67/128 (52%), Gaps = 9/128 (7%)
Query: 43 LDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDII 102
L+NGL V + + L + AGS E E G AH +EH+AF T+K + D+
Sbjct: 63 LENGL--RVASENSGLSTCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQLDLE 120
Query: 103 KFLESIGAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEK 162
+E++GA NA TS ++TVY + + L RA+ +LA+ + + ++E+
Sbjct: 121 LEIENMGAHL----NAYTSREQTVY--YAKAFSRD-LPRAVEILADIIQNSTLGEAEIER 173
Query: 163 ERGAVLEE 170
ERG +L E
Sbjct: 174 ERGVILRE 181
>sp|O75439|MPPB_HUMAN Mitochondrial-processing peptidase subunit beta OS=Homo sapiens
GN=PMPCB PE=1 SV=2
Length = 489
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 60/108 (55%), Gaps = 7/108 (6%)
Query: 63 LALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDIIKFLESIGAEFGACQNAVTSA 122
+ L + AGS E E G AH +EH+AF T+K + D+ +E++GA NA TS
Sbjct: 81 VGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQLDLELEIENMGAHL----NAYTSR 136
Query: 123 DETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEKERGAVLEE 170
++TVY + + L RA+ +LA+ + + ++E+ERG +L E
Sbjct: 137 EQTVY--YAKAFSKD-LPRAVEILADIIQNSTLGEAEIERERGVILRE 181
>sp|Q68FY0|QCR1_RAT Cytochrome b-c1 complex subunit 1, mitochondrial OS=Rattus
norvegicus GN=Uqcrc1 PE=1 SV=1
Length = 480
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 97/227 (42%), Gaps = 18/227 (7%)
Query: 43 LDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDII 102
LDNGL +S P + + + GS E E G + +EHLAF T+ + +
Sbjct: 53 LDNGLRVASEQSSHPT--CTVGVWIDVGSRYETEKNNGAGYFLEHLAFKGTKNRPGNALE 110
Query: 103 KFLESIGAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEK 162
K +ESIGA NA ++ + T Y L + K L + + +LA+ + + +EK
Sbjct: 111 KEVESIGAHL----NAYSTREHTAY-LIKALSKD--LPKVVELLADIVQNISLEDSQIEK 163
Query: 163 ERGAVLEEYRGNRNASGRMQ----DAHWVLMMEGSKYAECLPIGLEKVIRTVSSDTVKRF 218
ER +L E + N MQ D +G+ A+ + G + +R +S + +
Sbjct: 164 ERDVILREMQEN---DASMQNVVFDYLHATAFQGTPLAQAVE-GPSENVRRLSRTDLTDY 219
Query: 219 YQKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPPVIPKF 265
+ Y+ M + A G + +++L HF + +P
Sbjct: 220 LSRHYKAPRMVLAAAGGVKHQQ-LLDLAQDHFSSVSQVYEEDAVPSI 265
>sp|O32965|Y855_MYCLE Uncharacterized zinc protease ML0855 OS=Mycobacterium leprae
(strain TN) GN=ML0855 PE=3 SV=1
Length = 445
Score = 60.5 bits (145), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 95/202 (47%), Gaps = 17/202 (8%)
Query: 57 PRMRAA-LALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDIIKFLESIGAEFGAC 115
P +R+A + + V GS E G AH +EHL F +T T DI + ++++G E
Sbjct: 39 PAVRSASVGVWVGVGSRDEGATVAGAAHFLEHLLFKSTSTRTAMDIAQAIDAVGGEL--- 95
Query: 116 QNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEKERGAVLEE--YRG 173
NA T+ + T Y V EL A+ ++A+ R + DD+E ER VLEE R
Sbjct: 96 -NAFTAKEHTCYYAHVLDSDLEL---AVDLVADVVLNGRCAVDDVELERDVVLEEIAMRD 151
Query: 174 N--RNASGRMQDAHWVLMMEGSKYAECLPIGLEKVIRTVSSDTVKRFYQKWYRLQNMAVI 231
+ +A G M ++ + G IG + + ++ + F+ + Y + M V+
Sbjct: 152 DDPEDALGDM----FLAALFGDHPVGRPVIGTMESVSAMTRTQLHSFHVRRYTPERM-VV 206
Query: 232 AVGDFPDTKGVVELINTHFGQK 253
AV D +V L+ HFG +
Sbjct: 207 AVAGNVDHDEMVALVREHFGSR 228
>sp|Q1RJ61|Y522_RICBR Uncharacterized zinc protease RBE_0522 OS=Rickettsia bellii (strain
RML369-C) GN=RBE_0522 PE=3 SV=1
Length = 412
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 137/326 (42%), Gaps = 36/326 (11%)
Query: 42 RLDNGLFYYVRCNSKPRMRA-ALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHD 100
+L NGL + + P + + A+ L K GS E E G+AH +EH+AF T+ T
Sbjct: 9 KLKNGL--TILTYNMPYVNSVAINLIAKVGSRYENPGEEGIAHFLEHMAFKGTKTRTAKQ 66
Query: 101 IIKFLESIGAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDL 160
I + +SIG F NA T ++TVY V E ++A++++A+ +++++
Sbjct: 67 IAEEFDSIGGHF----NAYTGHEKTVYYSRVL---SENCNKALAIIADIVQNSAFAEEEI 119
Query: 161 EKERGAVLEEY-RGNRNASGRMQDAHWVLMMEGSKYAECLPIGLEKVIRTVSSDTVKRFY 219
KE +L+E N + + + + + + + +G K I T + D +F
Sbjct: 120 AKEYQVILQEIAHAQDNPDDLVYEKFYNSVFKDQPLGKPI-LGTSKTIETFNRDHFLKFT 178
Query: 220 QKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPPVIPKFPVPSHQEPRFSCFI 279
K Y +N + G+ D + +V+ F P + H FI
Sbjct: 179 GKHYNAENFYLSIAGNV-DHEEIVKEAERLFSSLTQGEKSNFSPAKYIGGH------SFI 231
Query: 280 ESEAGGSAVIVSYKMPVNELKTIKDYKEMLTESMFLHALNQRFFKLSRRK---------- 329
+ + +I+ ++ + + + Y+ L +F ++ R F+ R K
Sbjct: 232 NKDLEQTTLILGFE-GTSYINLERLYQTQLLAIIFGGGMSSRLFQHIREKLGLAYAVGSY 290
Query: 330 DPPYFSC------SASADDLVRPLKA 349
+ PYF +++A D + L A
Sbjct: 291 NSPYFDSGVFTIYASTAHDKLELLAA 316
>sp|Q68XF0|Y210_RICTY Uncharacterized zinc protease RT0210 OS=Rickettsia typhi (strain
ATCC VR-144 / Wilmington) GN=RT0210 PE=3 SV=1
Length = 412
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 125/290 (43%), Gaps = 20/290 (6%)
Query: 42 RLDNGLFYYVRCNSKPRMRA-ALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHD 100
+L NGL + + P + + A+ L K G+ E E E G++H +EH+AF T+ T
Sbjct: 9 KLKNGLT--ILTYNMPYVHSVAINLIAKVGARYENEEEEGISHFLEHMAFKGTKTRTAQQ 66
Query: 101 IIKFLESIGAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDL 160
I + +SIG F NA T + TVY + V E +A+++LA+ + +++
Sbjct: 67 IAEEFDSIGGYF----NAYTGYENTVYYVRVL---SENCHKALNILADIIQNSIFADEEI 119
Query: 161 EKERGAVLEEYRGNR-NASGRMQDAHWVLMMEGSKYAECLPIGLEKVIRTVSSDTVKRFY 219
KE +++E + N + + + + + + + +G K + + + F
Sbjct: 120 SKEYQIIMQEIAHHHDNPDDLIYETFYNTVYKDQPLGKSI-LGTAKTLVKFTQEHFLNFI 178
Query: 220 QKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPPVIPKFPVPSHQEPRFSCFI 279
K Y +N+ + G+ K +V + F K IP + FI
Sbjct: 179 GKHYNAENLYLSIAGNIEHNK-IVIIAEELFASLKQGVTSSFIPAKYIGG------KGFI 231
Query: 280 ESEAGGSAVIVSYKMPVNELKTIKDYKEMLTESMFLHALNQRFFKLSRRK 329
E +++++ ++ + + K Y+ L +F ++ R F+ R K
Sbjct: 232 HKELEQTSLVLGFECT-SYINLEKLYQTYLLSIIFGGGVSSRLFQSIREK 280
>sp|Q92IX7|Y293_RICCN Uncharacterized zinc protease RC0293 OS=Rickettsia conorii (strain
ATCC VR-613 / Malish 7) GN=RC0293 PE=3 SV=1
Length = 412
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 125/290 (43%), Gaps = 20/290 (6%)
Query: 42 RLDNGLFYYVRCNSKPRMRA-ALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHD 100
+L NGL + + P + + A+ L K G+ E E G++H +EH+AF T+ T
Sbjct: 9 KLKNGL--TILTYNMPYVNSVAINLIAKVGARYENAEEDGISHFLEHMAFKGTKTRTAKQ 66
Query: 101 IIKFLESIGAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDL 160
I + ++IG F NA T + TVY V E +A+++LA+ S +++
Sbjct: 67 IAEAFDAIGGHF----NAYTGHENTVYYARVL---SENCDKALNILADIIQNSIFSDEEI 119
Query: 161 EKERGAVLEEYRGNR-NASGRMQDAHWVLMMEGSKYAECLPIGLEKVIRTVSSDTVKRFY 219
KE +++E ++ N + + + + + + +G K + T + + F
Sbjct: 120 AKEYQVIMQEIAHHQDNPDDLVYEKFYNKVYREQPLGKSI-LGTAKTLATFTKEHFFNFI 178
Query: 220 QKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPPVIPKFPVPSHQEPRFSCFI 279
K+Y N+ + G+ K +V + F K IP + + FI
Sbjct: 179 DKYYNAANLYLSIAGNIDHDK-IVIIAEQLFSSLKQGVKSSFIPAKYIGG------NGFI 231
Query: 280 ESEAGGSAVIVSYKMPVNELKTIKDYKEMLTESMFLHALNQRFFKLSRRK 329
E +++++ ++ + + K Y+ L +F ++ R F+ R K
Sbjct: 232 NKELEQTSLVLGFE-GTSYINLEKLYQTHLLSIIFGGGMSSRLFQSIREK 280
>sp|Q10040|YQA4_CAEEL Putative zinc protease C28F5.4 OS=Caenorhabditis elegans GN=C28F5.4
PE=3 SV=2
Length = 856
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 89/201 (44%), Gaps = 18/201 (8%)
Query: 43 LDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKY-TNHDI 101
L NGL + +SK R+ +A+AL VK G +++ G+AH EH+ F T KY + +
Sbjct: 32 LTNGLRVLLVSDSKTRV-SAVALDVKVGHLMDPWELPGLAHFCEHMLFLGTAKYPSEREY 90
Query: 102 IKFLESIGAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLE 161
K+L + + NA T D T Y V + E L A+ A+F + + ++ E
Sbjct: 91 FKYLAANNGD----SNAYTDTDHTNYSFEV---RSEKLYGALDRFAQFFLDPQFTESATE 143
Query: 162 KERGAVLEEYRGNRNAS-GRMQDAHWVLMMEGSKYAECLPIGLEKVI----RTVS---SD 213
+E AV EY N R L G Y++ IG +K + RT D
Sbjct: 144 REVCAVNCEYLDKVNEDFWRCLQVERSLSKPGHDYSK-FAIGNKKTLLEDPRTKGIEPRD 202
Query: 214 TVKRFYQKWYRLQNMAVIAVG 234
+ FY+ WY M VG
Sbjct: 203 VLLDFYKNWYSSDIMTCCIVG 223
>sp|Q9CZ13|QCR1_MOUSE Cytochrome b-c1 complex subunit 1, mitochondrial OS=Mus musculus
GN=Uqcrc1 PE=1 SV=2
Length = 480
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 95/225 (42%), Gaps = 18/225 (8%)
Query: 43 LDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDII 102
LDNGL V + + + AGS E E G + +EHLAF T+ + +
Sbjct: 53 LDNGL--RVASEQSSHATCTVGVWIDAGSRYETEKNNGAGYFLEHLAFKGTKNRPGNALE 110
Query: 103 KFLESIGAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEK 162
K +ESIGA NA ++ + T Y L + K L + + +LA+ + +EK
Sbjct: 111 KEVESIGAHL----NAYSTREHTAY-LIKALSKD--LPKVVELLADIVQNSSLEDSQIEK 163
Query: 163 ERGAVLEEYRGNRNASGRMQ----DAHWVLMMEGSKYAECLPIGLEKVIRTVSSDTVKRF 218
ER +L E + N MQ D +G+ A+ + G + +R +S + +
Sbjct: 164 ERDVILREMQEN---DASMQNVVFDYLHATAFQGTPLAQAVE-GPSENVRRLSRTDLTDY 219
Query: 219 YQKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPPVIP 263
+ Y+ M + A G + + +++L H + +P
Sbjct: 220 LNRHYKAPRMVLAAAGGV-EHQQLLDLAQKHLSSVSRVYEEDAVP 263
>sp|P10507|MPPB_YEAST Mitochondrial-processing peptidase subunit beta OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=MAS1 PE=1
SV=1
Length = 462
Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 104/242 (42%), Gaps = 27/242 (11%)
Query: 37 GVDYGRLDNGLFY---YVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSAT 93
G +L NGL Y+ S A + + V AGS E G AH +EHLAF T
Sbjct: 25 GTRTSKLPNGLTIATEYIPNTSS----ATVGIFVDAGSRAENVKNNGTAHFLEHLAFKGT 80
Query: 94 EKYTNHDIIKFLESIGAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEV 153
+ + I +E+IG+ NA TS + TVY E + +A+ +L++ T+
Sbjct: 81 QNRSQQGIELEIENIGSHL----NAYTSRENTVY---YAKSLQEDIPKAVDILSDILTKS 133
Query: 154 RVSKDDLEKERGAVLEEYRGNRNASGRMQDAHWVLMMEGSKYAECLPIGLE-----KVIR 208
+ +E+ER ++ E +M D + Y + P+G K I+
Sbjct: 134 VLDNSAIERERDVIIRE----SEEVDKMYDEVVFDHLHEITYKDQ-PLGRTILGPIKNIK 188
Query: 209 TVSSDTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPPVI--PKFP 266
+++ +K + K Y+ M + G D + +V+ +FG + P + P+ P
Sbjct: 189 SITRTDLKDYITKNYKGDRMVLAGAGAV-DHEKLVQYAQKYFGHVPKSESPVPLGSPRGP 247
Query: 267 VP 268
+P
Sbjct: 248 LP 249
>sp|P31930|QCR1_HUMAN Cytochrome b-c1 complex subunit 1, mitochondrial OS=Homo sapiens
GN=UQCRC1 PE=1 SV=3
Length = 480
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 94/214 (43%), Gaps = 20/214 (9%)
Query: 43 LDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDII 102
LDNGL +S+P + + + GS E E G + +EHLAF T+ +
Sbjct: 53 LDNGLRVASEQSSQPT--CTVGVWIDVGSRFETEKNNGAGYFLEHLAFKGTKNRPGSALE 110
Query: 103 KFLESIGAEFGACQNAVTSADETVYEL-FVPVDKPELLSRAISVLAEFSTEVRVSKDDLE 161
K +ES+GA NA ++ + T Y + + D P +A+ +L + + +E
Sbjct: 111 KEVESMGAHL----NAYSTREHTAYYIKALSKDLP----KAVELLGDIVQNCSLEDSQIE 162
Query: 162 KERGAVLEEYRGNRNASGRMQDAHW----VLMMEGSKYAECLPIGLEKVIRTVSSDTVKR 217
KER +L E + N M+D + +G+ A+ + G + +R +S +
Sbjct: 163 KERDVILREMQEN---DASMRDVVFNYLHATAFQGTPLAQAVE-GPSENVRKLSRADLTE 218
Query: 218 FYQKWYRLQNMAVIAVGDFPDTKGVVELINTHFG 251
+ Y+ M + A G + + +++L H G
Sbjct: 219 YLSTHYKAPRMVLAAAGGV-EHQQLLDLAQKHLG 251
>sp|P55679|Y4WA_RHISN Uncharacterized zinc protease y4wA OS=Rhizobium sp. (strain NGR234)
GN=NGR_a01040 PE=3 SV=1
Length = 512
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 13/203 (6%)
Query: 68 KAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDIIKFLESIGAEFGACQNAVTSADETVY 127
K G+ E + G+AH +EHL F T+K+ + + + IG E +NA T +D T Y
Sbjct: 116 KVGNADEPPGKSGIAHFLEHLMFKGTKKHPSGEFSAKIAEIGGE----ENAFTGSDYTAY 171
Query: 128 ELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEKERGAVLEE--YRGNRNASGRMQDAH 185
V PE L + A+ + ++ + ER +LEE +R + +++
Sbjct: 172 HQTV---TPESLRTMMEFEADRMRHLVLTDAVIVPERDVILEERRWRVENDPEQLLEEEM 228
Query: 186 WVLMMEGSKYAECLPIGLEKVIRTVSSDTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVEL 245
+ + Y IG + ++ + +FY ++Y N ++ GD D V +L
Sbjct: 229 QATLYQNHPY-RIPTIGWMHEMEQLNREDALKFYDRYYAPNNAILVVAGDV-DAGRVRQL 286
Query: 246 INTHFGQKKSATDPP--VIPKFP 266
+ FG D P V P+ P
Sbjct: 287 ADETFGTLPRGPDLPARVRPQEP 309
>sp|Q00302|MPPB_BLAEM Mitochondrial-processing peptidase subunit beta OS=Blastocladiella
emersonii GN=MPP1 PE=3 SV=1
Length = 465
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 102/222 (45%), Gaps = 31/222 (13%)
Query: 42 RLDNGLFYYVRCNSKPRM-RAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHD 100
RL NGL V S P + A + + + +GS E + GVAH +EH++F T++ T
Sbjct: 39 RLPNGL--TVATESNPALATATVGVWIDSGSRAETKANNGVAHFLEHISFKGTKQRTQSG 96
Query: 101 IIKFLESIGAEFGACQNAVTSADETVY--ELFVPVDKPELLSRAISVLAEFSTEVRVSKD 158
+ +E++G NA TS ++TVY +LF + +++ +++L + +
Sbjct: 97 LEIEIENMGGHL----NAYTSREQTVYYAKLF-----SQDVAKGVNILGDILQNSTLDPG 147
Query: 159 DLEKERGAVLEEYRGNRNASGRMQDAHWVLMMEGSKYAECLP--------IGLEKVIRTV 210
+++ER +L E D ++ +A P +G ++ I+T+
Sbjct: 148 AIDRERAVILRE--------AEEVDKQVEEVVFDHLHAAAFPENALGYTILGPKENIQTL 199
Query: 211 SSDTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQ 252
S ++ + + Y M V+ G+ D + +L T+FG+
Sbjct: 200 SQADLQAYIKNNYTADRMVVVGAGNV-DHAELCKLAETNFGK 240
>sp|Q9P7X1|MPPB_SCHPO Probable mitochondrial-processing peptidase subunit beta
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=qcr1 PE=2 SV=1
Length = 457
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 105/235 (44%), Gaps = 16/235 (6%)
Query: 43 LDNGLFYYVRCNSKPRMRAALAL-AVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDI 101
L NGL V P + A L V AGS E G AH +EHLAF T+ + +
Sbjct: 27 LKNGL--TVATEHHPYAQTATVLVGVDAGSRAETAKNNGAAHFLEHLAFKGTKNRSQKAL 84
Query: 102 IKFLESIGAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLE 161
E+ GA NA TS ++TVY + K + A++VLA+ T +S +E
Sbjct: 85 ELEFENTGAHL----NAYTSREQTVY--YAHAFK-NAVPNAVAVLADILTNSSISASAVE 137
Query: 162 KERGAVL-EEYRGNRNASGRMQDAHWVLMMEGSKYAECLPIGLEKVIRTVSSDTVKRFYQ 220
+ER +L E+ ++ A + D +G + +G ++ I +++ + + ++ +
Sbjct: 138 RERQVILREQEEVDKMADEVVFDHLHATAYQGHPLGRTI-LGPKENIESLTREDLLQYIK 196
Query: 221 KWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPPVIPKFPVPSHQEPRF 275
YR M + + G + +V+L +FG + + + P +PRF
Sbjct: 197 DNYRSDRMIISSAGSISHEE-LVKLAEKYFGHLEPSAEQ---LSLGAPRGLKPRF 247
>sp|Q54JQ2|IDE_DICDI Insulin-degrading enzyme homolog OS=Dictyostelium discoideum
GN=DDB_G0287851 PE=3 SV=1
Length = 962
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 27/205 (13%)
Query: 40 YGRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKY-TN 98
Y +L NGL V + + +++ L++ GS+ G+AH +EH+ F TEK+
Sbjct: 32 YVKLKNGL-EVVLVSDETTDQSSCCLSINIGSLCNPREIEGLAHFLEHMLFLGTEKFPVE 90
Query: 99 HDIIKFLESIGAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKD 158
+ + F+ G + N TS ++T Y V E A+ + F +++D
Sbjct: 91 KEFVNFIYLNGGSY----NGTTSPNKTNYYFTV---NQESFEEALDRFSSFFISPLMNED 143
Query: 159 DLEKERGAVLEEYRGNRNASGRMQDAHWVLMMEGSKYAECLPIGLEKVIRTVSSDTVKR- 217
+ +E AV E+ N MQ W + + E P+ + T S T+KR
Sbjct: 144 AVNRELNAVDSEHNNN------MQKDFWRMDRIVNDQFEGHPMSM---FFTGDSSTLKRD 194
Query: 218 --------FYQKWYRLQNMAVIAVG 234
FYQ++Y M V G
Sbjct: 195 DIREKVVEFYQRYYSANLMKVCIFG 219
>sp|O22941|PXM16_ARATH Zinc-metallopeptidase, peroxisomal OS=Arabidopsis thaliana GN=PXM16
PE=2 SV=1
Length = 970
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 18/215 (8%)
Query: 60 RAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHD-IIKFLESIGAEFGACQNA 118
+ A +++V GS + + G+AH +EH+ F A+EKY D K++ E G NA
Sbjct: 46 KCAASMSVSVGSFSDPQGLEGLAHFLEHMLFYASEKYPEEDSYSKYI----TEHGGSTNA 101
Query: 119 VTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEKERGAVLEEYRGNRNAS 178
T+++ET Y V D A+ A+F + +S D +E AV E + N +
Sbjct: 102 YTASEETNYHFDVNAD---CFDEALDRFAQFFIKPLMSADATMREIKAVDSENQKNLLSD 158
Query: 179 G-RMQDAHWVLMMEGSKYAECLPIGLEKV-IRTVSS--DT---VKRFYQKWYRLQNMAVI 231
G R++ L E Y + ++ + +R + DT + +FY++ Y M ++
Sbjct: 159 GWRIRQLQKHLSKEDHPYHKFSTGNMDTLHVRPQAKGVDTRSELIKFYEEHYSANIMHLV 218
Query: 232 AVGDFPDTKGVVELINTHFGQKKSATDPPVIPKFP 266
G K + +L+ F + ++ V+P+FP
Sbjct: 219 VYGKESLDK-IQDLVERMFQEIQNTNK--VVPRFP 250
>sp|Q4UML9|Y338_RICFE Uncharacterized zinc protease RF_0338 OS=Rickettsia felis (strain
ATCC VR-1525 / URRWXCal2) GN=RF_0338 PE=3 SV=1
Length = 412
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 124/291 (42%), Gaps = 22/291 (7%)
Query: 42 RLDNGLFYYVRCNSKPRMRA-ALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHD 100
+L NGL V + P + + A+ L K GS E E G++H +EH+AF T T
Sbjct: 9 KLKNGL--TVLTYNMPYVDSVAINLITKVGSRYENSEEEGISHFLEHMAFKGTTTRTAKQ 66
Query: 101 IIKFLESIGAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDL 160
I + + IG F NA T ++T+Y V E +A+++LA+ +++++
Sbjct: 67 IAEEFDEIGGHF----NAYTGHEKTIYYARVL---SENCDKALNILADIIQNSIFAEEEI 119
Query: 161 EKERGAVLEEYRGNR-NASGRMQDAHWVLMMEGSKYAECLPIGLEKVIRTVSSDTVKRFY 219
KE +L+E ++ N + + + + + + + +G K + + + + F
Sbjct: 120 AKEYQVILQEIAHSQDNPDDLIYEKFYSSVYKDQPLGKPI-LGASKTLSSFTKEHFLSFI 178
Query: 220 QKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPPVIPKFPVPSHQEPRFSCFI 279
K Y N+ + G+ D +V F K +P + + FI
Sbjct: 179 DKHYNAGNLYLSVAGNV-DHDKIVSSAERLFSSLKQGEKSNFLPAKYIGG------NSFI 231
Query: 280 ESEAGGSAVIVSYK-MPVNELKTIKDYKEMLTESMFLHALNQRFFKLSRRK 329
+ + +I+ ++ P L+ + Y+ L +F ++ R F+ R K
Sbjct: 232 NKDLEQTTLILGFEGTPYINLERL--YRTQLLAIIFGGGMSSRLFQHIREK 280
>sp|P11913|MPPB_NEUCR Mitochondrial-processing peptidase subunit beta OS=Neurospora
crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 /
DSM 1257 / FGSC 987) GN=pep PE=1 SV=1
Length = 476
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 100/218 (45%), Gaps = 17/218 (7%)
Query: 61 AALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDIIKFLESIGAEFGACQNAVT 120
+ + + + AGS E + G AH +EHLAF T K T + +E++GA NA T
Sbjct: 62 STVGMWIDAGSRAETDETNGTAHFLEHLAFKGTTKRTQQQLELEIENMGAHL----NAYT 117
Query: 121 SADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEKERGAVLEEYRGNRNASGR 180
S + TVY F E + + + +L + ++ + +E+ER +L E + +
Sbjct: 118 SRENTVY--FAKA-LNEDVPKCVDILQDILQNSKLEESAIERERDVILRE---SEEVEKQ 171
Query: 181 MQDAHWVLMMEGSKYAECLP---IGLEKVIRTVSSDTVKRFYQKWYRLQNMAVIAVGDFP 237
+++ + + + + L +G + IR ++ + + + Y M ++ G P
Sbjct: 172 LEEVVFDHLHATAYQHQPLGRTILGPRENIRDITRTELVNYIKNNYTADRMVLVGAGGVP 231
Query: 238 DTKGVVELINTHFGQKKSATDPPVIPKFPVPSHQEPRF 275
+ +VE+ + +F K AT P + + S ++P F
Sbjct: 232 HEQ-LVEMADKYF-SKLPATAP--VSSASILSKKKPDF 265
>sp|Q0P5M8|MPPA_BOVIN Mitochondrial-processing peptidase subunit alpha OS=Bos taurus
GN=PMPCA PE=2 SV=1
Length = 525
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 71/137 (51%), Gaps = 10/137 (7%)
Query: 32 GEQPFGVDYGRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFS 91
G++ F LDNGL V +K + + + +GS E ++ G+AH +E LAFS
Sbjct: 61 GQEKFETKVTTLDNGL--RVASQNKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLAFS 118
Query: 92 ATEKYTNHD-IIKFLESIGAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFS 150
+TE++ + D I+ LE G G C + TS D T+Y V D + L + +LA+
Sbjct: 119 STERFDSKDEILLTLEKHG---GIC-DCQTSRDTTMYA--VSADS-KGLDTVVGLLADVV 171
Query: 151 TEVRVSKDDLEKERGAV 167
R++ +++E R AV
Sbjct: 172 LHPRLTDEEIEMARMAV 188
>sp|Q8CVS2|PTRA_ECOL6 Protease 3 OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 /
UPEC) GN=ptrA PE=3 SV=1
Length = 962
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 68/140 (48%), Gaps = 11/140 (7%)
Query: 42 RLDNGLFYYVRCNSKPRMRAAL-ALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHD 100
RLDNG+ V S P+ +L AL V GS+ + E +G+AH +EH++ ++KY D
Sbjct: 48 RLDNGMV--VLLVSDPQAVKSLSALVVPVGSLEDPEAYQGLAHYLEHMSLMGSKKYPQAD 105
Query: 101 -IIKFLESIGAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDD 159
+ ++L+ G NA T+ T + L V D L A+ LA+ E + K
Sbjct: 106 SLAEYLKM----HGGSHNASTAPYRTAFYLEVENDA---LPGAVDRLADAIAEPLLDKKY 158
Query: 160 LEKERGAVLEEYRGNRNASG 179
E+ER AV E R G
Sbjct: 159 AERERNAVNAELTMARTRDG 178
>sp|Q8X6M8|PTRA_ECO57 Protease 3 OS=Escherichia coli O157:H7 GN=ptrA PE=3 SV=1
Length = 962
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 68/140 (48%), Gaps = 11/140 (7%)
Query: 42 RLDNGLFYYVRCNSKPRMRAAL-ALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHD 100
RLDNG+ V S P+ +L AL V GS+ + E +G+AH +EH++ ++KY D
Sbjct: 48 RLDNGMV--VLLVSDPQAVKSLSALVVPVGSLEDPEAYQGLAHYLEHMSLMGSKKYPQAD 105
Query: 101 -IIKFLESIGAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDD 159
+ ++L+ G NA T+ T + L V D L A+ LA+ E + K
Sbjct: 106 SLAEYLKM----HGGSHNASTAPYRTAFYLEVENDA---LPGAVDRLADAIAEPLLDKKY 158
Query: 160 LEKERGAVLEEYRGNRNASG 179
E+ER AV E R G
Sbjct: 159 AERERNAVNAELTMARTRDG 178
>sp|Q83QC3|PTRA_SHIFL Protease 3 OS=Shigella flexneri GN=ptrA PE=3 SV=1
Length = 962
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 68/140 (48%), Gaps = 11/140 (7%)
Query: 42 RLDNGLFYYVRCNSKPRMRAAL-ALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHD 100
RLDNG+ V S P+ +L AL V GS+ + E +G+AH +EH++ ++KY D
Sbjct: 48 RLDNGMV--VLLVSDPQAVKSLSALVVPVGSLEDPEAYQGLAHYLEHMSLMGSKKYPQAD 105
Query: 101 -IIKFLESIGAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDD 159
+ ++L+ G NA T+ T + L V D L A+ LA+ E + K
Sbjct: 106 SLAEYLKM----HGGSHNASTAPYRTAFYLEVENDA---LPGAVDRLADAIAEPLLDKKY 158
Query: 160 LEKERGAVLEEYRGNRNASG 179
E+ER AV E R G
Sbjct: 159 AERERNAVNAELTMARTRDG 178
>sp|P20069|MPPA_RAT Mitochondrial-processing peptidase subunit alpha OS=Rattus
norvegicus GN=Pmpca PE=1 SV=1
Length = 524
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 70/137 (51%), Gaps = 10/137 (7%)
Query: 32 GEQPFGVDYGRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFS 91
G++ F LDNGL V +K L + + +GS E ++ G+AH +E LAFS
Sbjct: 60 GQEKFETKVTTLDNGL--RVASQNKFGQFCTLGILINSGSRYEAKYLSGIAHFLEKLAFS 117
Query: 92 ATEKYTNHD-IIKFLESIGAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFS 150
+T ++ + D I+ LE G G C + TS D T+Y V D + L + +LA+
Sbjct: 118 STARFDSKDEILLTLEKHG---GIC-DCQTSRDTTMYA--VSADS-KGLDTVVGLLADVV 170
Query: 151 TEVRVSKDDLEKERGAV 167
R++ +++E R AV
Sbjct: 171 LHPRLTDEEIEMTRMAV 187
>sp|P05458|PTRA_ECOLI Protease 3 OS=Escherichia coli (strain K12) GN=ptrA PE=1 SV=1
Length = 962
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 68/140 (48%), Gaps = 11/140 (7%)
Query: 42 RLDNGLFYYVRCNSKPRMRAAL-ALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHD 100
RLDNG+ V S P+ +L AL V GS+ + E +G+AH +EH++ ++KY D
Sbjct: 48 RLDNGMV--VLLVSDPQAVKSLSALVVPVGSLEDPEAYQGLAHYLEHMSLMGSKKYPQAD 105
Query: 101 -IIKFLESIGAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDD 159
+ ++L+ G NA T+ T + L V D L A+ LA+ E + K
Sbjct: 106 SLAEYLKM----HGGSHNASTAPYRTAFYLEVENDA---LPGAVDRLADAIAEPLLDKKY 158
Query: 160 LEKERGAVLEEYRGNRNASG 179
E+ER AV E R G
Sbjct: 159 AERERNAVNAELTMARTRDG 178
>sp|Q10713|MPPA_HUMAN Mitochondrial-processing peptidase subunit alpha OS=Homo sapiens
GN=PMPCA PE=1 SV=2
Length = 525
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 72/137 (52%), Gaps = 10/137 (7%)
Query: 32 GEQPFGVDYGRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFS 91
G++ F LDNGL V +K + + + +GS E ++ G+AH +E LAFS
Sbjct: 61 GQEKFETKVTTLDNGL--RVASQNKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLAFS 118
Query: 92 ATEKYTNHD-IIKFLESIGAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFS 150
+T ++ + D I+ LE G G C + TS D T+Y V D + L +++LA+
Sbjct: 119 STARFDSKDEILLTLEKHG---GIC-DCQTSRDTTMYA--VSADS-KGLDTVVALLADVV 171
Query: 151 TEVRVSKDDLEKERGAV 167
+ R++ +++E R AV
Sbjct: 172 LQPRLTDEEVEMTRMAV 188
>sp|Q42290|MPPB_ARATH Probable mitochondrial-processing peptidase subunit beta
OS=Arabidopsis thaliana GN=At3g02090 PE=1 SV=2
Length = 531
Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 98/219 (44%), Gaps = 15/219 (6%)
Query: 43 LDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDII 102
L NGL N + A + + + AGS E + G AH +EH+ F T++ T +
Sbjct: 102 LPNGLRVATESNLSAKT-ATVGVWIDAGSRFESDETNGTAHFLEHMIFKGTDRRT----V 156
Query: 103 KFLESIGAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEK 162
+ LE + G NA TS ++T Y V +D +++A+ VLA+ + + + +
Sbjct: 157 RALEEEIEDIGGHLNAYTSREQTTYYAKV-LDSN--VNQALDVLADILQNSKFEEQRINR 213
Query: 163 ERGAVLEEYRGNRNASGRMQDAHWVLMMEGSKYAEC--LPIGLEKVIRTVSSDTVKRFYQ 220
ER +L E + + + H L +Y +G + +++++ + ++ + +
Sbjct: 214 ERDVILREMQEVEGQTDEVVLDH--LHATAFQYTPLGRTILGPAQNVKSITREDLQNYIK 271
Query: 221 KWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDP 259
Y M + A G + VVE + F K ++DP
Sbjct: 272 THYTASRMVIAAAGAVKHEE-VVEQVKKLF--TKLSSDP 307
>sp|Q9DC61|MPPA_MOUSE Mitochondrial-processing peptidase subunit alpha OS=Mus musculus
GN=Pmpca PE=1 SV=1
Length = 524
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 70/137 (51%), Gaps = 10/137 (7%)
Query: 32 GEQPFGVDYGRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFS 91
G++ F LDNGL V +K + + + +GS E ++ G+AH +E LAFS
Sbjct: 60 GQEKFETKVTTLDNGL--RVASQNKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLAFS 117
Query: 92 ATEKYTNHD-IIKFLESIGAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFS 150
+T ++ + D I+ LE G G C + TS D T+Y V D + L + +LA+
Sbjct: 118 STARFDSKDEILLTLEKHG---GIC-DCQTSRDTTMYA--VSADS-KGLDTVVDLLADVV 170
Query: 151 TEVRVSKDDLEKERGAV 167
R++ +++E R AV
Sbjct: 171 LHPRLTDEEIEMTRMAV 187
>sp|Q04805|YMXG_BACSU Uncharacterized zinc protease YmxG OS=Bacillus subtilis (strain
168) GN=ymxG PE=3 SV=3
Length = 409
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 88/188 (46%), Gaps = 12/188 (6%)
Query: 55 SKPRMRA-ALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDIIKFLESIGAEFG 113
+ P +R+ A+ + + GS E G++H +EH+ F T + +I + + IG +
Sbjct: 17 NNPTVRSVAIGVWIGTGSRHETPEINGISHFLEHMFFKGTSTKSAREIAESFDRIGGQV- 75
Query: 114 ACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEKERGAVLEEYRG 173
NA TS + T Y V E + A+ VLA+ +++L+KE+ V EE +
Sbjct: 76 ---NAFTSKEYTCYYAKVL---DEHANYALDVLADMFFHSTFDENELKKEKNVVYEEIKM 129
Query: 174 NRNASGRMQDAHWVLMMEG-SKYAECLPI-GLEKVIRTVSSDTVKRFYQKWYRLQNMAVI 231
+A + H +L ++ PI G E+ + + + D+++++ +Y + +
Sbjct: 130 YEDAPDDI--VHDLLSKATYGNHSLGYPILGTEETLASFNGDSLRQYMHDYYTPDRVVIS 187
Query: 232 AVGDFPDT 239
G+ D+
Sbjct: 188 VAGNISDS 195
>sp|Q5R513|MPPA_PONAB Mitochondrial-processing peptidase subunit alpha OS=Pongo abelii
GN=PMPCA PE=2 SV=2
Length = 525
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 70/137 (51%), Gaps = 10/137 (7%)
Query: 32 GEQPFGVDYGRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFS 91
G++ F LDNGL V +K + + + +GS E ++ G+AH +E LAFS
Sbjct: 61 GQEKFETKVTTLDNGL--RVASQNKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLAFS 118
Query: 92 ATEKYTNHD-IIKFLESIGAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFS 150
+T ++ + D I+ LE G G C + TS D T+Y V D + L + +LA+
Sbjct: 119 STARFDSKDEILLTLEKHG---GIC-DCQTSRDTTMYA--VSADS-KGLDTVVGLLADVV 171
Query: 151 TEVRVSKDDLEKERGAV 167
+ R++ +++E R V
Sbjct: 172 LQPRLTDEEVEMTRMTV 188
>sp|Q4W6B5|MPPB_DICDI Mitochondrial-processing peptidase subunit beta OS=Dictyostelium
discoideum GN=mppB PE=1 SV=1
Length = 469
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 81/177 (45%), Gaps = 12/177 (6%)
Query: 61 AALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKY-TNHDIIKFLESIGAEFGACQNAV 119
A++ + V +GSV E + GVAH +EH+ F T K T I +E++G NA
Sbjct: 56 ASVGVWVDSGSVYETDKNNGVAHFLEHMIFKGTAKRPTPQSIETEIENMGGSL----NAF 111
Query: 120 TSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEKERGAVLEE--YRGNRNA 177
TS + + Y + V D + A+ +L++ + +E+ER +L E Y ++
Sbjct: 112 TSREHSAYYMKVLKDN---VPNAVDILSDILQNSKFETSLIEQERDTILSENDYIQSKED 168
Query: 178 SGRMQDAHWVLMMEGSKYAECLPIGLEKVIRTVSSDTVKRFYQKWYRLQNMAVIAVG 234
H +GS + +G + I++++ + ++ F + Y + + A G
Sbjct: 169 EVVFDQLH-AAAFQGSALGRTI-LGPVENIKSITREQIQEFINENYTGDRLVISAAG 223
>sp|P22817|IDE_DROME Insulin-degrading enzyme OS=Drosophila melanogaster GN=Ide PE=1
SV=4
Length = 990
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 16/201 (7%)
Query: 42 RLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHD- 100
+L+NGL + + + AA AL+V+ G + + + G+AH EH+ F TEKY + +
Sbjct: 41 QLENGLKVLLISDPNTDVSAA-ALSVQVGHMSDPTNLPGLAHFCEHMLFLGTEKYPHENG 99
Query: 101 IIKFLESIGAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDL 160
+L ++ G NA T T Y V DK L A+ A+F +
Sbjct: 100 YTTYL----SQSGGSSNAATYPLMTKYHFHVAPDK---LDGALDRFAQFFIAPLFTPSAT 152
Query: 161 EKERGAVLEEYRGNRNAS-GRMQDAHWVLMMEG---SKYAECLPIGLEKVIRTVS---SD 213
E+E AV E+ N + R++ + L SK+ L ++ ++ + D
Sbjct: 153 EREINAVNSEHEKNLPSDLWRIKQVNRHLAKPDHAYSKFGSGNKTTLSEIPKSKNIDVRD 212
Query: 214 TVKRFYQKWYRLQNMAVIAVG 234
+ +F+++WY M + +G
Sbjct: 213 ELLKFHKQWYSANIMCLAVIG 233
>sp|O43847|NRDC_HUMAN Nardilysin OS=Homo sapiens GN=NRD1 PE=1 SV=2
Length = 1150
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 77/174 (44%), Gaps = 20/174 (11%)
Query: 60 RAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDIIKFLESIGAEFGACQNAV 119
++A AL V GS + + G+AH +EH+ F + KY + + ++ + G NA
Sbjct: 209 QSAAALCVGVGSFADPDDLPGLAHFLEHMVFMGSLKYPDEN---GFDAFLKKHGGSDNAS 265
Query: 120 TSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEKERGAVLEEYRGNRNASG 179
T + TV++ V + + A+ A+F + +D +++E AV EY+
Sbjct: 266 TDCERTVFQFDV---QRKYFKEALDRWAQFFIHPLMIRDAIDREVEAVDSEYQ-----LA 317
Query: 180 RMQDAHWVLMMEGSKYAECLPIG---------LEKVIRTVSSDTVKRFYQKWYR 224
R DA+ M+ GS P+G L+ R + DT R + W R
Sbjct: 318 RPSDANRKEMLFGSLARPGHPMGKFFWGNAETLKHEPRKNNIDTHARLREFWMR 371
>sp|Q86A84|MPPA1_DICDI Mitochondrial-processing peptidase subunit alpha-1 OS=Dictyostelium
discoideum GN=mppA1 PE=1 SV=1
Length = 654
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 106/237 (44%), Gaps = 22/237 (9%)
Query: 21 KLVSFDLNEELGEQPFGVDYGRLDNGLFYYVRCNSKPRMRA--ALALAVKAGSVLEEEHE 78
KL S D ++ F + L NG +R SK A+ L + AG+ E +
Sbjct: 127 KLYSNDNEANNNQKEFKAEISTLPNG----IRVVSKQTHEGVCAIGLYINAGTKYESPQD 182
Query: 79 RGVAHIVEHLAFSATEKYTNHDIIKFLESIGAEFGACQNAVTSADETVYELFVPVDKPEL 138
RGV +++E + F T+ + +IIK LE I NA+ S+ + + + V + +
Sbjct: 183 RGVFNLLEKMTFKETKNNSTSEIIKELEEISM------NAMASSSREMINVSLEVLRKD- 235
Query: 139 LSRAISVLAEFSTEVRVSKDDLEKERGAVLEEYRGNRNASGRMQDAHWVLMMEGSKYAEC 198
L +S+L++ S+++L ++ + Y N+S D ++ G + +
Sbjct: 236 LEFVLSILSDQIKSPTYSEEELREQIEVCIRNYEMITNSSS---DQLMTEILMGVAFGDA 292
Query: 199 ----LPIGLEKVIRTVSSDTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVELINTHFG 251
L I + + ++ + + +K+Y +N+ + G + V+EL++ +FG
Sbjct: 293 GLGNLVIATPEQYQNITREKLFDALRKYYVGKNIVISVTG--AEHSQVIELVDKYFG 347
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 363,876,498
Number of Sequences: 539616
Number of extensions: 15442692
Number of successful extensions: 37278
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 67
Number of HSP's that attempted gapping in prelim test: 37167
Number of HSP's gapped (non-prelim): 138
length of query: 1008
length of database: 191,569,459
effective HSP length: 128
effective length of query: 880
effective length of database: 122,498,611
effective search space: 107798777680
effective search space used: 107798777680
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)