Query 001831
Match_columns 1008
No_of_seqs 274 out of 2873
Neff 10.3
Searched_HMMs 46136
Date Fri Mar 29 10:21:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001831.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001831hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK15101 protease3; Provisiona 100.0 8E-78 1.7E-82 750.8 79.4 858 30-961 36-929 (961)
2 PTZ00432 falcilysin; Provision 100.0 4.7E-64 1E-68 612.6 74.4 872 38-966 92-1109(1119)
3 COG1025 Ptr Secreted/periplasm 100.0 4.5E-59 9.7E-64 521.0 74.9 850 31-946 17-895 (937)
4 COG1026 Predicted Zn-dependent 100.0 1.4E-60 3E-65 535.1 61.4 875 38-972 22-970 (978)
5 KOG0959 N-arginine dibasic con 100.0 2.1E-58 4.5E-63 526.9 70.0 865 15-946 6-910 (974)
6 KOG2019 Metalloendoprotease HM 100.0 6.9E-57 1.5E-61 474.1 62.0 875 12-962 33-987 (998)
7 KOG0960 Mitochondrial processi 100.0 3.7E-53 8.1E-58 420.3 35.2 406 37-469 33-450 (467)
8 COG0612 PqqL Predicted Zn-depe 100.0 2.4E-51 5.3E-56 465.8 39.3 409 38-469 17-432 (438)
9 TIGR02110 PQQ_syn_pqqF coenzym 100.0 5.1E-46 1.1E-50 424.5 61.3 334 40-391 2-345 (696)
10 KOG2067 Mitochondrial processi 100.0 6.9E-45 1.5E-49 362.0 31.5 400 36-464 23-441 (472)
11 KOG0961 Predicted Zn2+-depende 100.0 1.6E-41 3.4E-46 357.8 52.9 876 39-973 22-998 (1022)
12 COG0612 PqqL Predicted Zn-depe 100.0 3.6E-43 7.9E-48 398.9 37.2 409 523-964 16-435 (438)
13 KOG0960 Mitochondrial processi 100.0 4.7E-41 1E-45 334.3 33.9 407 523-964 33-453 (467)
14 TIGR02110 PQQ_syn_pqqF coenzym 100.0 9.2E-37 2E-41 348.7 36.7 334 526-884 2-348 (696)
15 KOG2067 Mitochondrial processi 100.0 8.1E-36 1.7E-40 297.5 27.8 410 522-963 23-447 (472)
16 PRK15101 protease3; Provisiona 100.0 3.3E-35 7.2E-40 367.6 36.2 408 522-961 42-463 (961)
17 PTZ00432 falcilysin; Provision 100.0 8.1E-29 1.8E-33 303.7 38.2 420 528-970 96-586 (1119)
18 KOG2583 Ubiquinol cytochrome c 100.0 5.3E-25 1.2E-29 221.4 37.1 384 37-458 22-411 (429)
19 COG1025 Ptr Secreted/periplasm 99.9 7.2E-24 1.6E-28 239.1 35.3 411 520-962 20-443 (937)
20 KOG0959 N-arginine dibasic con 99.9 1.1E-21 2.4E-26 226.3 34.2 402 523-958 27-444 (974)
21 COG1026 Predicted Zn-dependent 99.9 7.1E-21 1.5E-25 216.0 32.4 411 531-973 29-471 (978)
22 PF00675 Peptidase_M16: Insuli 99.9 5.8E-22 1.3E-26 188.9 13.6 147 48-203 1-148 (149)
23 PF05193 Peptidase_M16_C: Pept 99.9 5.3E-21 1.1E-25 191.3 15.7 181 209-392 1-184 (184)
24 KOG2583 Ubiquinol cytochrome c 99.8 1.8E-17 3.9E-22 167.5 33.8 388 526-961 25-421 (429)
25 PF05193 Peptidase_M16_C: Pept 99.8 1.6E-18 3.5E-23 173.2 16.7 179 688-882 1-184 (184)
26 KOG2019 Metalloendoprotease HM 99.8 1.2E-16 2.7E-21 170.9 28.8 428 531-992 61-531 (998)
27 KOG0961 Predicted Zn2+-depende 99.7 5.7E-16 1.2E-20 165.6 27.7 434 532-997 29-489 (1022)
28 PF00675 Peptidase_M16: Insuli 99.7 1.4E-15 3.1E-20 144.9 14.3 144 534-681 1-145 (149)
29 PF08367 M16C_assoc: Peptidase 98.3 1.4E-05 3.1E-10 82.5 14.8 124 531-657 77-211 (248)
30 PF03410 Peptidase_M44: Protei 98.3 1.8E-05 4E-10 83.1 15.1 186 41-258 2-194 (590)
31 PHA03081 putative metalloprote 98.2 3.3E-05 7.3E-10 81.3 15.0 186 41-258 2-194 (595)
32 PF03410 Peptidase_M44: Protei 97.0 0.017 3.8E-07 61.5 14.8 187 527-739 2-196 (590)
33 PHA03081 putative metalloprote 96.8 0.026 5.6E-07 60.3 13.9 188 527-739 2-196 (595)
34 PF08367 M16C_assoc: Peptidase 94.7 0.2 4.3E-06 51.9 9.9 110 44-159 76-193 (248)
35 PF09851 SHOCT: Short C-termin 67.2 13 0.00027 24.0 3.8 24 370-393 6-30 (31)
36 PF01102 Glycophorin_A: Glycop 44.3 22 0.00047 31.7 2.9 10 983-992 69-78 (122)
37 PF12191 stn_TNFRSF12A: Tumour 38.4 10 0.00023 33.2 0.0 28 979-1007 82-109 (129)
38 PF01729 QRPTase_C: Quinolinat 33.0 45 0.00098 31.9 3.3 43 685-727 105-147 (169)
39 COG1725 Predicted transcriptio 32.3 1.9E+02 0.0041 26.0 6.8 66 802-883 52-120 (125)
40 cd01324 cbb3_Oxidase_CcoQ Cyto 31.7 32 0.00069 24.9 1.6 17 991-1007 21-37 (48)
41 PF05545 FixQ: Cbb3-type cytoc 29.4 60 0.0013 23.5 2.7 24 984-1007 13-36 (49)
42 TIGR03778 VPDSG_CTERM VPDSG-CT 28.8 75 0.0016 19.5 2.5 19 985-1003 7-25 (26)
43 PHA01735 hypothetical protein 28.3 2.2E+02 0.0048 22.1 5.4 36 850-885 9-45 (76)
44 PF01102 Glycophorin_A: Glycop 26.7 68 0.0015 28.6 3.1 28 978-1005 67-95 (122)
45 PF00046 Homeobox: Homeobox do 24.2 87 0.0019 23.3 3.0 45 962-1006 10-54 (57)
46 TIGR01167 LPXTG_anchor LPXTG-m 21.5 1E+02 0.0022 20.0 2.5 19 987-1005 14-32 (34)
47 COG1512 Beta-propeller domains 21.0 4.9E+02 0.011 27.2 8.4 71 213-297 53-123 (271)
No 1
>PRK15101 protease3; Provisional
Probab=100.00 E-value=8e-78 Score=750.80 Aligned_cols=858 Identities=14% Similarity=0.135 Sum_probs=619.7
Q ss_pred ccCCCCCCcEEEEcCCCcEEEEeecCCCCceEEEEEEEcccCCCCCCCCCChhHHHHHHccCCCCCCCh-hhHHHHHHHc
Q 001831 30 ELGEQPFGVDYGRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTN-HDIIKFLESI 108 (1008)
Q Consensus 30 ~~~~~~~~i~~~~L~NGl~v~~~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ahllehl~f~gs~~~~~-~~~~~~l~~~ 108 (1008)
..+.|+..++..+|+|||+|++++++... .++++|+|++||++||++..|+|||+|||+|+||++||. .++.++++++
T Consensus 36 k~~~d~~~~~~~~L~NGL~v~l~~~~~~~-~~~~~l~v~~Gs~~ep~~~~GlAHflEHmlf~GT~~~p~~~~~~~~l~~~ 114 (961)
T PRK15101 36 KSEKDPRQYQAIRLDNGMTVLLVSDPQAV-KSLAALALPVGSLEDPDAQQGLAHYLEHMVLMGSKKYPQPDSLAEFLKKH 114 (961)
T ss_pred CCCCCccceEEEEeCCCCEEEEEeCCCCc-ceeEEEEeCcCCCCCCCCCCchHHHHHHHHhcCCccCCCcchHHHHHHHh
Confidence 34556677999999999999999988643 689999999999999999999999999999999999984 6899999999
Q ss_pred ccccCCCccccccCCeEEEEEECCCCCHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhcCCC-chhhhHHHHHH
Q 001831 109 GAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEKERGAVLEEYRGNRN-ASGRMQDAHWV 187 (1008)
Q Consensus 109 g~~~g~~~na~T~~d~t~y~~~~~~~~~~~l~~~l~~l~d~~~~p~~~~~~~~~er~~v~~e~~~~~~-~~~~~~~~~~~ 187 (1008)
|+. .||+|+.|+|+|++++++ ++++.+|++++|++.+|.|+++++++||++|.+|++...+ +..++.+.+.+
T Consensus 115 Gg~----~NA~T~~d~T~y~~~~~~---~~l~~aL~~~ad~~~~P~f~~~~~erE~~~v~~E~~~~~~~~~~~~~~~~~~ 187 (961)
T PRK15101 115 GGS----HNASTASYRTAFYLEVEN---DALPPAVDRLADAIAEPLLDPKNADRERNAVNAELTMARSRDGMRMAQVSAE 187 (961)
T ss_pred CCC----ccceECCCceEEEEEcCH---HHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHh
Confidence 755 599999999999999995 4599999999999999999999999999999999997765 45566777788
Q ss_pred HHhcCCCCCccCCCCCHHHhcCC----CHHHHHHHHHhcccCCCcEEEEEccCCCHHHHHHHHHHhhcCCCCCCCCCCCC
Q 001831 188 LMMEGSKYAECLPIGLEKVIRTV----SSDTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPPVIP 263 (1008)
Q Consensus 188 ~~~~~~p~~~~~~~g~~~~i~~i----t~~~l~~f~~~~y~p~n~~l~i~Gdi~d~~~~~~~i~~~f~~~~~~~~~~~~~ 263 (1008)
.+|++|||+ ++.+|+.++|+++ ++++|++||++||+|+||+|+|+||+ ++++++++++++|+.|++...+.+..
T Consensus 188 ~~~~~hp~~-~~~~G~~etl~~~~~~~~~~~L~~f~~~~Y~p~nm~lvv~G~~-~~~~l~~~~~~~F~~~~~~~~~~~~~ 265 (961)
T PRK15101 188 TINPAHPGS-RFSGGNLETLSDKPGSKLQDALVDFYQRYYSANLMKAVIYSNQ-PLPELAKLAADTFGRVPNKNASVPEI 265 (961)
T ss_pred hCCCCCCcc-cCCCCCHHHhhcCCchHHHHHHHHHHHHhCcccceEEEEEcCC-CHHHHHHHHHHHhccCCCCCCCCCCC
Confidence 999999999 9999999999997 69999999999999999999999999 99999999999999998754322111
Q ss_pred CCCCCCCCCCceEEEecCCCCceEEEEEEEcCCCcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeeeeeeccCc-
Q 001831 264 KFPVPSHQEPRFSCFIESEAGGSAVIVSYKMPVNELKTIKDYKEMLTESMFLHALNQRFFKLSRRKDPPYFSCSASADD- 342 (1008)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~p~~~~~~~~~~~~~~l~~il~~~~~srL~~~lr~~~g~~~~~~~~~~~- 342 (1008)
..++.........+...+..++..+.+.|+.|... .........++..+|++...++|+..++ ++|++|+++++...
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~p~~~-~~~~~~~~~~l~~ll~~~~~g~l~~~L~-~~gla~~v~s~~~~~ 343 (961)
T PRK15101 266 TVPVVTDAQKGIIIHYVPAQPRKVLRVEFRIDNNS-AKFRSKTDEYISYLIGNRSPGTLSDWLQ-KQGLAEGISAGADPM 343 (961)
T ss_pred CCCCCCHHHcCeEEEEEECCCCcEEEEEEecCCcH-HHHhhCHHHHHHHHhcCCCCCcHHHHHH-HcCccceeeeccccc
Confidence 11111111112222333446678899999987642 1122234668888988876677887775 78999999987653
Q ss_pred ccccccEEEEEEEecCC---cHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhccCCcHHHHHHHHHHh
Q 001831 343 LVRPLKAYIMSSSCKER---GTLKALESMLIEVARVRLHGFSEREVSVARALLMSEVESAYLERDQMQSTNLRDECLQHF 419 (1008)
Q Consensus 343 ~~~~~~~~~i~~~~~~~---~~~~~~~~i~~~l~~l~~~g~s~~el~~ak~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (1008)
...+.|.|.+.+.+.++ +.+++++.++++|++++++|++++|++++|+.+..++.. .+. ....+.+..+...+
T Consensus 344 ~~~~~g~f~i~~~~~~~~~~~~~~v~~~i~~~i~~l~~~g~~~~el~~~k~~~~~~~~~--~~~--~~~~~~~~~~~~~~ 419 (961)
T PRK15101 344 VDRNSGVFAISVSLTDKGLAQRDQVVAAIFSYLNLLREKGIDKSYFDELAHVLDLDFRY--PSI--TRDMDYIEWLADTM 419 (961)
T ss_pred cCCCceEEEEEEEcChHHHHhHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhccccC--CCC--CChHHHHHHHHHHh
Confidence 23567899999998885 788999999999999999999999999999998776532 111 12233344444443
Q ss_pred hcCCCccCHHHHHHHHHHHcCCCCHHHHHHHHHHhcccCCeEEEEeCCCCCCCHH-----------HHH-HHHHHHHhhh
Q 001831 420 LCKEPIIGIEYEARLQKTLLPHISALEVSRYSEKLQTSCSCVIKTIEPQTFSTID-----------DLK-NIVLKIKNLE 487 (1008)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~i~~it~edv~~~~~~~l~~~~~~~~~~~p~~~~~~~-----------~~~-~~~~~~~~~~ 487 (1008)
.+.+. .. .......++.+++++|+++++. |.++++.+++++|+...+.+ ++. +++++|....
T Consensus 420 -~~~~~---~~-~l~~~~~~~~~~~~~i~~~~~~-l~~~n~~i~~~~~~~~~~~~~~~~~~~Y~~~~i~~~~~~~~~~~~ 493 (961)
T PRK15101 420 -LRVPV---EH-TLDAPYIADRYDPKAIKARLAE-MTPQNARIWYISPQEPHNKTAYFVDAPYQVDKISEQTFADWQQKA 493 (961)
T ss_pred -hhCCH---HH-heeCchhhhcCCHHHHHHHHhh-cCHhHEEEEEEeCCCCCCccccccCCcceeecCCHHHHHHHhcCC
Confidence 22221 11 1111245888999999999877 88999999999887542211 221 2334443211
Q ss_pred c-cCCC-CCCcCCCccccccCCCCCCceeEeEEecCCCeEEEEecCCcEEEEEecCC---CCCeEEEEEEecCc-CCCCC
Q 001831 488 E-KNIS-PWDEENIPEEIVSTKPSPGNIVQQFEYENLGATELVLSNGMRVCYKCTDF---LDDQVLFTGFSYGG-LSELP 561 (1008)
Q Consensus 488 ~-~~i~-~~~~~~~p~~l~~~~~~~~~i~~~~~~~~~~~~~~~L~NGl~v~~~~~~~---~~~~v~~~~~~~gg-~~~~~ 561 (1008)
. ..+. |...+.+|..+ .+.... .....++.+.++||++||+++++. .| .+.+.+.+.++ ..+.+
T Consensus 494 ~~~~l~lP~~n~fip~~~--------~~~~~~-~~~~~p~~i~~~~g~~vw~~~d~~f~~~P-k~~i~~~~~~~~~~~~~ 563 (961)
T PRK15101 494 QNIALSLPELNPYIPDDF--------SLIKAD-KAYKHPELIVDEPGLRVVYMPSQYFADEP-KADISLVLRNPKAMDSA 563 (961)
T ss_pred CCccCCCCCCCCccCCCC--------eeccCC-CCCCCCeEEEcCCCeEEEEeCCCccccCC-CEEEEEEEeCCCccCCH
Confidence 1 1111 00001122221 111000 011234788999999999999973 34 47777755444 44455
Q ss_pred cchhhhhchhHHHhhhcCCCCCCHHHHHHHHcCceEEEEEEecceeEEEEEecChhhHHHHHHHHHHHhccCCCCCHHHH
Q 001831 562 ESEYLSCSMGSTIAGEIGVFGYRPSMLMDMLAGKRVEGGTKVGAYMRTFSGDCSPSDLETALQLVYQLFTTNVAPGEEEV 641 (1008)
Q Consensus 562 ~~~g~~~~l~~~l~~~~g~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~ll~~~l~~p~~~~~~~~ 641 (1008)
...+++.++..++. .+..++....+..|.+++.+ +.+.+.+++++++++++.+|+++.+.+.+|.+ ++++|
T Consensus 564 ~~~~l~~L~~~ll~-------~~l~e~~y~a~~aG~~~~~~-~~~g~~i~v~g~s~~l~~ll~~l~d~l~~~~~-~~~~f 634 (961)
T PRK15101 564 RNQVLFALNDYLAG-------LALDQLSNQASVGGISFSTN-ANNGLMVNANGYTQRLPQLLQALLEGYFSFTP-TEEQL 634 (961)
T ss_pred HHHHHHHHHHHHHH-------HHHHHHhchHHhcCcEEEEc-cCCCEEEEEEecChhHHHHHHHHHHHHhcCCC-CHHHH
Confidence 67788877766652 22334445555678888888 78999999999999999999999999999988 89999
Q ss_pred HHHHHHHHHHHHHhhcChHHHHHHHHHH-HhcCCCCcCCCC-ChhhhhcCChhHHHHHHhhhhCCCCCcEEEEEecCCcc
Q 001831 642 EIVMQMAEEVIRAQERDPYTAFANRVKE-INYGNSYFFRPI-RISDLQKVDPLKACDYFNSCFKDPSTFTVVIVGNIDPS 719 (1008)
Q Consensus 642 ~~~k~~~~~e~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~-~~~~i~~lt~~~l~~~~~~~~~~~~~~~l~i~Gd~~~~ 719 (1008)
+++|+++++++++...+ ..+...+.. ..|..|||+... +.+.|+++|.+++++||++ ++.+.|++++|+||++.+
T Consensus 635 e~~k~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~py~~~~~~~~~l~~it~edl~~f~~~-~~~~~~~~~~v~GNi~~~ 711 (961)
T PRK15101 635 AQAKSWYREQLDSAEKG--KAYEQAIMPAQMLSQVPYFERDERRKLLPSITLKDVLAYRDA-LLSGATPEFLVVGNLTEE 711 (961)
T ss_pred HHHHHHHHHHHhhhccc--CcHHHHHHHHHHHhcCCCCCHHHHHHHHhcCCHHHHHHHHHH-HHHhceEEEEEEcCCCHH
Confidence 99999999999987653 112222221 345688888534 8999999999999999996 668999999999999999
Q ss_pred chHHHHHHhhccCCCCCCCCCccccCCCCCCCcCCCCccceeEEeCCCCCcceEEEEEe-eccCCCCcchHhHHHHHHHH
Q 001831 720 NGIPLILQYLGGIPKPPEPILHFNRDNLKGLPFTFPSSIIREVVRSPMVEAQCSVQLCF-PVELKNGTMVEEINYVGFLS 798 (1008)
Q Consensus 720 ~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~~~~L~ 798 (1008)
++.++++++++.++..+.... ....+..+.+.. ..+.......+..+.+.+ ..... .....+++.+|+
T Consensus 712 ea~~l~~~~~~~l~~~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~---~~~~~v~~~lLg 780 (961)
T PRK15101 712 QVTTLARDVQKQLGADGTEWW-------RGKDVVVDKKQS-VNFEKAGSSTDSALAAVYVPTGYD---EYQSSAYSSLLG 780 (961)
T ss_pred HHHHHHHHHHHHhccCCcccc-------cccceEeCCCCe-EEEecCCCCCCCeEEEEEEeCCCC---CHHHHHHHHHHH
Confidence 999999999988875322110 000011111111 112222222333344434 22221 245567788999
Q ss_pred HHHHHHHHHHHhhhcCCeeeeeeeeeccCCCCCCCCCcceeEEEEEEe---CcccHHHHHHHHHHHHHHHHhCCCCHHHH
Q 001831 799 KLLETKMMQVLRFKHGQIYSASVSVFLGGNKHSRTGDVRGDISINFSC---DPEISFKLVDLALDEISRLQKEGPSDEDV 875 (1008)
Q Consensus 799 ~~l~s~L~~~lRe~~gl~Y~~~~~~~~~~~~~~~~~~~~g~~~i~~~~---~~~~~~~~~~~~~~~l~~i~~~~is~~el 875 (1008)
+++++|||.+||+++||+|+|+++..... +.+.+.+.+++ +|+.+.+.++.+.+++....+ ++|++||
T Consensus 781 ~~~ssrlf~~LRtk~qLgY~V~s~~~~~~--------~~~~~~~~vqs~~~~~~~l~~~i~~f~~~~~~~l~-~lt~eE~ 851 (961)
T PRK15101 781 QIIQPWFYNQLRTEEQLGYAVFAFPMSVG--------RQWGMGFLLQSNDKQPAYLWQRYQAFFPQAEAKLR-AMKPEEF 851 (961)
T ss_pred HHHhHHHHHHHHHHhhhceEEEEEeeccC--------CeeeEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH-hCCHHHH
Confidence 99999999999999999999999876432 34445555543 466677777777777543334 7999999
Q ss_pred HHHHHHHHHHHHhhccchHHHHHHHHHhhccccccCCCCcchhhchhhHHHHHhcCCHHHHHHHHHHh-cCCCCCCc-eE
Q 001831 876 STILELEQRAHETGLQENYHWLDRILCSYQSRVYSGDVGTSFKIQDEARSKVRKSLQPLTLQLALQRI-MPYPCNKQ-FT 953 (1008)
Q Consensus 876 ~~ak~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vT~edi~~~a~~~-l~~~~~~~-~~ 953 (1008)
+++|+.++.++....++....+.++...+.. ...+++.. +.+.+.|++||++||++++++| +.+ ++ ..
T Consensus 852 ~~~k~~l~~~~~~~~~sl~~~a~~~~~~i~~--~~~~fd~~-----~~~~~~i~~vT~edv~~~~~~~~~~~---~~~~~ 921 (961)
T PRK15101 852 AQYQQALINQLLQAPQTLGEEASRLSKDFDR--GNMRFDSR-----DKIIAQIKLLTPQKLADFFHQAVIEP---QGLAI 921 (961)
T ss_pred HHHHHHHHHHhcCCCCCHHHHHHHHHHHHhc--CCCCcChH-----HHHHHHHHcCCHHHHHHHHHHHhcCC---CCCEE
Confidence 9999999999998887776665555443321 12244443 7789999999999999999998 666 55 34
Q ss_pred EEEEecCc
Q 001831 954 VVILMPQV 961 (1008)
Q Consensus 954 ~~i~~p~~ 961 (1008)
++.+++..
T Consensus 922 ~~~~~~~~ 929 (961)
T PRK15101 922 LSQISGSQ 929 (961)
T ss_pred EEEeeccC
Confidence 45555543
No 2
>PTZ00432 falcilysin; Provisional
Probab=100.00 E-value=4.7e-64 Score=612.58 Aligned_cols=872 Identities=12% Similarity=0.058 Sum_probs=585.6
Q ss_pred cEEEEcCCCcEEEEeecCCCC-ceEEEEEEEcccCCCCCCCCCChhHHHHHHccCCCCCCChhhHHHHHHHcccccCCCc
Q 001831 38 VDYGRLDNGLFYYVRCNSKPR-MRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDIIKFLESIGAEFGACQ 116 (1008)
Q Consensus 38 i~~~~L~NGl~v~~~~~~~~~-~~~~~~l~~~~Gs~~e~~~~~G~ahllehl~f~gs~~~~~~~~~~~l~~~g~~~g~~~ 116 (1008)
+.+...+||++|+.++++.+. ..+.+.++|++|+ .+..|+||++|||+|+||++||..++...+++.| +|+++
T Consensus 92 ~~~~H~~nGl~vl~~~~~d~~~~~~~f~i~f~T~~----~d~~G~aH~LEH~~f~GS~k~p~~~~~~~l~~~g--l~~~l 165 (1119)
T PTZ00432 92 TVYSHKKTGLQVISLKTNDSSGKEMCFDFYVPTPP----HNDKGIPHILEHSVLSGSKKYNYKDSFSLLVQGG--FNSFL 165 (1119)
T ss_pred EEEEEcCCCCEEEEEecCCCccceeEEEEEecCCC----CCCcchhHHHHHHHhCCCCCCCcccHHHHHHhcC--cCCCc
Confidence 678899999999988876541 1378999999997 4569999999999999999999999998888777 56789
Q ss_pred cccccCCeEEEEEECCCCCHHHHHHHHHHHHHhccCCCCChHHH-----------HHH--------------------HH
Q 001831 117 NAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDL-----------EKE--------------------RG 165 (1008)
Q Consensus 117 na~T~~d~t~y~~~~~~~~~~~l~~~l~~l~d~~~~p~~~~~~~-----------~~e--------------------r~ 165 (1008)
||+|+.|+|+|+++++. .+++..+|+++.|++++|.|+++++ +++ |+
T Consensus 166 NA~T~~D~T~Y~~~~~~--e~d~~~~ldv~~d~v~~P~~~~~~~~f~qEgwh~E~~~~~~~~~~~~e~~~~~~~~l~~kg 243 (1119)
T PTZ00432 166 NAYTFKDRTSYLFASTN--EKDFYNTADVYMDSVFQPNILEDKDIFKQEGWHYKVTKLKDDEKNADELGNVHDRHVSYSG 243 (1119)
T ss_pred cccCCCCceEEEeccCC--HHHHHHHHHHHHHHHhCcCcccccchhhhhhhhccccccccccccccccccccccccchhh
Confidence 99999999999999874 4469999999999999999998864 222 89
Q ss_pred HHHHHHhcCCCc-hhhhHHHHHHHHhcCCCCCccCCCCCHHHhcCCCHHHHHHHHHhcccCCCcEEEEEccCCCHHHHHH
Q 001831 166 AVLEEYRGNRNA-SGRMQDAHWVLMMEGSKYAECLPIGLEKVIRTVSSDTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVE 244 (1008)
Q Consensus 166 ~v~~e~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~g~~~~i~~it~~~l~~f~~~~y~p~n~~l~i~Gdi~d~~~~~~ 244 (1008)
+|++|+++..++ ..++.+.+.+.+| +|||+ ++.+|++++|.++|.++|++||++||+|+||+|+++||+ |++++.+
T Consensus 244 VV~~Emk~~~~~p~~~~~~~~~~~lf-~~pY~-~~~~G~~~~I~~lt~e~l~~Fh~~~Y~P~N~~l~v~Gdi-d~~~~l~ 320 (1119)
T PTZ00432 244 IVYSEMKKRFSDPLSFGYSVIYQNLF-SNVYK-YDSGGDPKDIVELTYEELVEFYKTYYGPKTATVYFYGPN-DVTERLE 320 (1119)
T ss_pred HHHHHHHHhhCCHHHHHHHHHHHHHh-CCCCC-CCCCCChHhhccCCHHHHHHHHHHhcCccceEEEEEcCC-CHHHHHH
Confidence 999999998655 4566888889999 99999 899999999999999999999999999999999999999 9999999
Q ss_pred HHHHhhcCCCCCCCCC----C-CCCCCCC---CCCCCceEE--EecCCCCceEEEEE-EEcCCCc----------CCCHH
Q 001831 245 LINTHFGQKKSATDPP----V-IPKFPVP---SHQEPRFSC--FIESEAGGSAVIVS-YKMPVNE----------LKTIK 303 (1008)
Q Consensus 245 ~i~~~f~~~~~~~~~~----~-~~~~~~~---~~~~~~~~~--~~~~~~~~~~v~l~-~~~p~~~----------~~~~~ 303 (1008)
+++++|+.+|+..... + .+..+.+ ....+.... +...+..+..+.++ |.+++.. .+.++
T Consensus 321 ~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~e~~~l~~~~w~~~p~~~~~~~~~~~~~d~~~ 400 (1119)
T PTZ00432 321 FVDNYLTKHPKTGQLSHTAYREDADENLLYEEYKDKPKHVKKKFSSHSEEEENLMSVSWLLNPKHNGSKDYDKSLIDPVD 400 (1119)
T ss_pred HHHHHHhhcccccccccccccccccccccccccccCCeEEEeccCCCccccccEEEEEEEcCCccccccccccccCCHHH
Confidence 9999998887542111 0 0011111 111222111 11223345666665 9884221 22368
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCCeeeee-eccCcccccccEEEEEEE-ecC-------CcHHHHHHHHHHHHHH
Q 001831 304 DYKEMLTESMFLHALNQRFFKLSRRKDPPYFSCS-ASADDLVRPLKAYIMSSS-CKE-------RGTLKALESMLIEVAR 374 (1008)
Q Consensus 304 ~~~~~~l~~il~~~~~srL~~~lr~~~g~~~~~~-~~~~~~~~~~~~~~i~~~-~~~-------~~~~~~~~~i~~~l~~ 374 (1008)
++++.++..+|+++.+|+|++.|++ .|++|++. ++.... ...+.|.+.+. +.. ++++++.+.|+++|++
T Consensus 401 ~~AL~VLs~lLggg~sS~L~q~LrE-~GLa~svv~~~~~~~-~~~~~f~I~l~g~~~~~~~~~~~~~~ev~~~I~~~L~~ 478 (1119)
T PTZ00432 401 YLALLVLNYLLLGTPESVLYKALID-SGLGKKVVGSGLDDY-FKQSIFSIGLKGIKETNEKRKDKVHYTFEKVVLNALTK 478 (1119)
T ss_pred HHHHHHHHHHHcCCCccHHHHHHHh-cCCCcCCCcCcccCC-CCceEEEEEEEcCChHhccchhhhHHHHHHHHHHHHHH
Confidence 8999999999999999999999996 79999863 344333 67788888875 332 3377899999999999
Q ss_pred HHhCCCCHHHHHHHHHHHHHHHHHHHHhhcc-CCcHHHHHHHHHHhhcCCCccC---HHHHHHHHHHHcCCCCHHHHHHH
Q 001831 375 VRLHGFSEREVSVARALLMSEVESAYLERDQ-MQSTNLRDECLQHFLCKEPIIG---IEYEARLQKTLLPHISALEVSRY 450 (1008)
Q Consensus 375 l~~~g~s~~el~~ak~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~it~edv~~~ 450 (1008)
++++||++++++++++++...+... +.+. .....++..++..|.+|..... .....+.++..+ .-++..+..+
T Consensus 479 l~~eGi~~eele~a~~qlef~~rE~--~~~~~p~gl~~~~~~~~~~~~g~dp~~~l~~~~~l~~lr~~~-~~~~~y~e~L 555 (1119)
T PTZ00432 479 VVTEGFNKSAVEASLNNIEFVMKEL--NLGTYPKGLMLIFLMQSRLQYGKDPFEILRFEKLLNELKLRI-DNESKYLEKL 555 (1119)
T ss_pred HHHhCCCHHHHHHHHHHHHHHhhhc--cCCCCCcHHHHHHHHHHHHhcCCCHHHHHhhHHHHHHHHHHH-hcccHHHHHH
Confidence 9999999999999999988765421 1111 1245677788888888643222 112222333333 2244679999
Q ss_pred HHHhcc-cCCeEEEEeCCCC--C-------------------CCHHHHHHHHHHHHhhhccCCCCCCcCCCccccccCCC
Q 001831 451 SEKLQT-SCSCVIKTIEPQT--F-------------------STIDDLKNIVLKIKNLEEKNISPWDEENIPEEIVSTKP 508 (1008)
Q Consensus 451 ~~~~l~-~~~~~~~~~~p~~--~-------------------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~p~~l~~~~~ 508 (1008)
+++||- +++.+++++.|+. . .++++++++.++.++. +.++..+.+.+.++..|
T Consensus 556 i~k~ll~N~h~~~v~~~p~~s~~~~~~~~~~e~~~L~~~~~~Ls~ee~~~i~~~~~~l-----~~~q~~~~~~e~l~~lP 630 (1119)
T PTZ00432 556 IEKHLLNNNHRVTVHLEAVESSKYEKEFNKLVKDELKERLSHLTKEQVDEMEKAYEKF-----KKEREADDDPEHLDSFP 630 (1119)
T ss_pred HHHHccCCCeeeEEEEecCCcccHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH-----HHHhcCCCChhHHhhcC
Confidence 999875 5556777777876 3 2333333333333322 22222222222222222
Q ss_pred CC--CceeEeEE-ecCCCe-----------EEEEecCCcEEEEEecCCCCCeEEEEEEecCcCCCCCcchhhhhchhHHH
Q 001831 509 SP--GNIVQQFE-YENLGA-----------TELVLSNGMRVCYKCTDFLDDQVLFTGFSYGGLSELPESEYLSCSMGSTI 574 (1008)
Q Consensus 509 ~~--~~i~~~~~-~~~~~~-----------~~~~L~NGl~v~~~~~~~~~~~v~~~~~~~gg~~~~~~~~g~~~~l~~~l 574 (1008)
.. .+|..... ++...+ ......+|++|++++.++ .+.+++.+++. ....+.+.....-++..+
T Consensus 631 ~l~~~DI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T-nGi~y~~~~fd--l~~l~~e~~~yl~L~~~~ 707 (1119)
T PTZ00432 631 ILSLSDLNKETEEIPTKLYKLSSDSLKENMDLDSDGGSVTVLVHPIES-RGILYLDFAFS--LDSLTVDELKYLNLFKAL 707 (1119)
T ss_pred CCcHHHcCCcccCCcchhhhcccccccccccccccCCCcceEEEecCC-CCeEEEEEEec--CCCCCHHHHhhHHHHHHH
Confidence 21 12221111 111000 001335789999997654 45699999885 334554332222234444
Q ss_pred hhhcCCCCCCHHHHHHHHcCceEEEEEE----ec------------ceeEEEEEecChhhHHHHHHHHHHHhccCCCCCH
Q 001831 575 AGEIGVFGYRPSMLMDMLAGKRVEGGTK----VG------------AYMRTFSGDCSPSDLETALQLVYQLFTTNVAPGE 638 (1008)
Q Consensus 575 ~~~~g~~~~~~~~l~~~l~~~g~~~~~~----~~------------~~~~~~~~~~~~~~l~~~l~ll~~~l~~p~~~~~ 638 (1008)
+...||++++..++...++...++++++ ++ ..++.+++.|+.++++++++|+.+++.++.|.+.
T Consensus 708 l~~~gT~~~s~~el~~~i~~~tGg~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~l~~~~~~~~~l~~eil~~~~f~d~ 787 (1119)
T PTZ00432 708 LKENGTDKLSSEEFTYKREKNLGGLSASTAFYSETNNLTYDDPYNGVGYLNVRAKVLKHKVNEMVDIVLEALKDADFSNS 787 (1119)
T ss_pred HHhcCCCCCCHHHHHHHHHHhCCCeEEEEEEeccccccccCcccccceEEEEEEEEhhhhHHHHHHHHHHHHhcCCCCcH
Confidence 5568999999999999999876665554 22 2368899999999999999999999999999666
Q ss_pred HHHHHHHHHHHHHHHHhhc-ChHHHHHHHHHHHh----------cCCCCcCCCC-C-h-----hhhhcCChhHHHHHHhh
Q 001831 639 EEVEIVMQMAEEVIRAQER-DPYTAFANRVKEIN----------YGNSYFFRPI-R-I-----SDLQKVDPLKACDYFNS 700 (1008)
Q Consensus 639 ~~~~~~k~~~~~e~~~~~~-~p~~~~~~~~~~~~----------~~~~~~~~~~-~-~-----~~i~~lt~~~l~~~~~~ 700 (1008)
+++..+..+.+..+.+... +....+...+...+ .|=+.+ ..+ . . ++...+ .+.|.+.+++
T Consensus 788 ~rl~~il~~~~~~~~~~~~~~Gh~~A~~~~~s~~S~~~~~~e~~~G~~~~-~fl~~l~~~~~e~~~~~v-~~~L~~i~~~ 865 (1119)
T PTZ00432 788 KKGVEILKRKINGMKTVFSSKGHKFALKRMKSKFSVSDYADELVNGYSQL-LFLKETLVPLAEKDWSKV-ESKLNEIRNK 865 (1119)
T ss_pred HHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhcCCHHHHHHHHhcCHHHH-HHHHHHHHHHhhhhHHHH-HHHHHHHHHH
Confidence 6688888888887777655 33333332222111 110000 000 0 0 112222 3445666775
Q ss_pred hhCCCCCcEEEEEecCC-ccchHHHHHHhhccCCCCCCCCC-ccccCCCCCCCcC---CCCccceeEEeCCCCCcceEEE
Q 001831 701 CFKDPSTFTVVIVGNID-PSNGIPLILQYLGGIPKPPEPIL-HFNRDNLKGLPFT---FPSSIIREVVRSPMVEAQCSVQ 775 (1008)
Q Consensus 701 ~~~~~~~~~l~i~Gd~~-~~~~~~~i~~~~~~l~~~~~~~~-~~~~~~~~~~~~~---~p~~~~~~~~~~~~~~~~~~v~ 775 (1008)
. .+.+|+.+.|+||.+ .+.+.+.+..++..++....... ......+...... ++.......+..+. ...++.
T Consensus 866 i-~~~~~l~~~vt~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~p~--~V~yv~ 942 (1119)
T PTZ00432 866 L-LSMKNLTVNVTGDSELLDSLLDDSTTFLKKLSSTFKENDNKSSDKVWVKEVLDKKLMESVDKNEFIVLPT--RVNFVG 942 (1119)
T ss_pred H-hCcCCcEEEEEeCHHHHHHHHHHHHHHHHhcccccccccccccccccccccccccccCCcccceEEEccC--ceeEEE
Confidence 4 467999999999974 45666666677777752210000 0000001100000 11111223333332 233444
Q ss_pred EEeec-cCCCCcchHhHHHHHHHHHHH-HHHHHHHHhhhcCCeeeeeeeeeccCCCCCCCCCcceeEEEEEEeCcccHHH
Q 001831 776 LCFPV-ELKNGTMVEEINYVGFLSKLL-ETKMMQVLRFKHGQIYSASVSVFLGGNKHSRTGDVRGDISINFSCDPEISFK 853 (1008)
Q Consensus 776 ~~~~~-~~~~~~~~~~~~~~~~L~~~l-~s~L~~~lRe~~gl~Y~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~~ 853 (1008)
.+.+. ...+++..+ +.|++.+| ++.||..||++ |++||++++.. ..|.|.++.+.+|+ +.+
T Consensus 943 ~~~~~~~~~~~~~~~----l~Vl~~~L~~~yLw~~IR~~-GGAYG~~~~~~-----------~~G~~~f~SYRDPn-~~~ 1005 (1119)
T PTZ00432 943 MGGKLFDKSDKVDGS----FQVIVHYLKNSYLWKTVRMS-LGAYGVFADLL-----------YTGHVIFMSYADPN-FEK 1005 (1119)
T ss_pred EecccccCCCccCHH----HHHHHHHHccccchHHHccc-CCccccCCccC-----------CCCeEEEEEecCCC-HHH
Confidence 43221 223333344 55566655 68999999975 99999986654 36889999999995 668
Q ss_pred HHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHHHHhhccchHHHHHHHHHhhccccccCCCCcchhhchhhHHHHHhcC
Q 001831 854 LVDLALDEISRLQK--EGPSDEDVSTILELEQRAHETGLQENYHWLDRILCSYQSRVYSGDVGTSFKIQDEARSKVRKSL 931 (1008)
Q Consensus 854 ~~~~~~~~l~~i~~--~~is~~el~~ak~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v 931 (1008)
.++++.+..+.+++ ..+|++++++++...++.++.+..........+..++. +. ..+. .+.+++.|.++
T Consensus 1006 Tl~~f~~~~~~l~~~~~~~~~~~l~~~iig~~~~~D~p~~p~~~g~~~~~~~l~-g~---t~e~-----rq~~R~~il~~ 1076 (1119)
T PTZ00432 1006 TLEVYKEVASALREAAETLTDKDLLRYKIGKISNIDKPLHVDELSKLALLRIIR-NE---SDED-----RQKFRKDILET 1076 (1119)
T ss_pred HHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHc-CC---CHHH-----HHHHHHHHHcC
Confidence 89999999999988 56999999999999999999987555444333433321 11 2222 37889999999
Q ss_pred CHHHHHHHHHHhcCCCCCCceEEEEEecCchhhHH
Q 001831 932 QPLTLQLALQRIMPYPCNKQFTVVILMPQVSRFKF 966 (1008)
Q Consensus 932 T~edi~~~a~~~l~~~~~~~~~~~i~~p~~~~~~~ 966 (1008)
|++||+++|+.|+.. .+...++++|+++++.+.
T Consensus 1077 t~edi~~~a~~~~~~--~~~~~~~v~g~~~~~~~~ 1109 (1119)
T PTZ00432 1077 TKEDFYRLADLMEKS--KEWEKVIAVVNSKTSDTA 1109 (1119)
T ss_pred CHHHHHHHHHHHHhh--hccCeEEEEECHHHhhhc
Confidence 999999999999974 245678899998876653
No 3
>COG1025 Ptr Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.5e-59 Score=520.95 Aligned_cols=850 Identities=15% Similarity=0.159 Sum_probs=596.9
Q ss_pred cCCCCCCcEEEEcCCCcEEEEeecCCCCceEEEEEEEcccCCCCCCCCCChhHHHHHHccCCCCCCCh-hhHHHHHHHcc
Q 001831 31 LGEQPFGVDYGRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTN-HDIIKFLESIG 109 (1008)
Q Consensus 31 ~~~~~~~i~~~~L~NGl~v~~~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ahllehl~f~gs~~~~~-~~~~~~l~~~g 109 (1008)
.+.|-..++..+|+|||+++++.++... +.+..|.|++||.+||.+.+|+|||+|||+|.||++||. ..+..+|.++|
T Consensus 17 ~~~d~r~y~~I~LpNGl~~LlisDP~a~-ks~aAL~V~vGs~~DP~e~~GLAHflEHmlfmGseKYP~~~~f~~fLskhg 95 (937)
T COG1025 17 PALDDRKYRAIKLPNGLRALLVSDPQAD-KSSAALVVPVGSFDDPEEYPGLAHFLEHMLFMGSEKYPDEGGFSEFLSKHG 95 (937)
T ss_pred CcccCcceeEEECCCCceEEEecCCCCC-ccceeEEeecCCCCChhhcccHHHHHHHHHHhcCccCCCccchHHHHHHcC
Confidence 3444455999999999999999998654 689999999999999999999999999999999999997 47899998886
Q ss_pred cccCCCccccccCCeEEEEEECCCCCHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhcCCC-chhhhHHHHHHH
Q 001831 110 AEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEKERGAVLEEYRGNRN-ASGRMQDAHWVL 188 (1008)
Q Consensus 110 ~~~g~~~na~T~~d~t~y~~~~~~~~~~~l~~~l~~l~d~~~~p~~~~~~~~~er~~v~~e~~~~~~-~~~~~~~~~~~~ 188 (1008)
.. .||+|..+.|+|++.++ +++++.||+.|++++.+|+|+++.+++||.+|-+|..+... +.+|+++.....
T Consensus 96 Gs----~NA~T~~~~T~fyFeV~---~~al~~ALDrFa~ff~~PLf~~e~~dRE~~AV~sE~~~~~~~D~~R~~~~~~~~ 168 (937)
T COG1025 96 GS----HNASTAGERTAFYFEVE---NDALEGALDRFADFFIEPLFNKEALDRERNAVNSEFTMNLTSDGWRMYQVQALT 168 (937)
T ss_pred Cc----cccccCCCceeEEEEec---HHHHHHHHHHHHHHHhccccChHHHHHHHHHHHHHHhcCcCchHHHHHHHHHhh
Confidence 44 59999999999999998 45699999999999999999999999999999999999855 455667666677
Q ss_pred HhcCCCCCccCCCCCHHHhcC----CCHHHHHHHHHhcccCCCcEEEEEccCCCHHHHHHHHHHhhcCCCCCCCCCCCCC
Q 001831 189 MMEGSKYAECLPIGLEKVIRT----VSSDTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPPVIPK 264 (1008)
Q Consensus 189 ~~~~~p~~~~~~~g~~~~i~~----it~~~l~~f~~~~y~p~n~~l~i~Gdi~d~~~~~~~i~~~f~~~~~~~~~~~~~~ 264 (1008)
+-++||++ ++..|+.+++.. ...++|++||++||.++||+++|.|.= +.+++.+++.++||++|++....+..+
T Consensus 169 ~np~HP~s-rFs~GN~~TL~~~p~~~v~~el~ef~~~~YSa~~M~lviyg~q-~ldeL~~~a~~~F~~Ipn~~~~~p~~p 246 (937)
T COG1025 169 ANPGHPLS-KFSTGNLETLSDKPGLVVQQELKEFHEKHYSANNMKLVIYGNQ-PLDELAKLAADLFGDIPNRARKIPPIP 246 (937)
T ss_pred cCCCCCcc-ccCCCChhhhccCCCchHHHHHHHHHHHhcChhheEEEEecCC-CHHHHHHHHHHHhCcCCCCCCCCCCCC
Confidence 77899999 999999999988 558999999999999999999999998 999999999999999998765544333
Q ss_pred CCCCCCCCCceEEEecCCCCceEEEEEEEcCCCcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeeeeeeccCccc
Q 001831 265 FPVPSHQEPRFSCFIESEAGGSAVIVSYKMPVNELKTIKDYKEMLTESMFLHALNQRFFKLSRRKDPPYFSCSASADDLV 344 (1008)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~p~~~~~~~~~~~~~~l~~il~~~~~srL~~~lr~~~g~~~~~~~~~~~~~ 344 (1008)
+++..+......+.+.+..+...+.|.|+.++... ....-....+.+++|......|...|. +.||+.++.++.....
T Consensus 247 ~p~~~d~~t~~ii~i~p~~~~~~L~i~f~i~~~~~-~~~~~~~~~~s~Lig~es~gsL~~~Lk-~~Glit~l~a~~~~~~ 324 (937)
T COG1025 247 VPVVTDEQTGKIIHIVPAKPRPRLRIYFPIDDNSA-KFRSKPDEYLSHLIGNESPGSLLAWLK-KQGLITELSAGLDPIS 324 (937)
T ss_pred CCCCChHHhCceEEeccCCCCceEEEEEEcCCccc-ccccCCHHHHHHHhccCCCchHHHHHH-hccchhhhcccccccc
Confidence 33323333444556666778899999999987531 111224557777888644444555554 6799999999988776
Q ss_pred ccccEEEEEEEecC---CcHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhccCCcHHHHHHHHHHhhc
Q 001831 345 RPLKAYIMSSSCKE---RGTLKALESMLIEVARVRLHGFSEREVSVARALLMSEVESAYLERDQMQSTNLRDECLQHFLC 421 (1008)
Q Consensus 345 ~~~~~~~i~~~~~~---~~~~~~~~~i~~~l~~l~~~g~s~~el~~ak~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (1008)
.++|.|.+.+..+. .+.++++..+++.|+.++.+|+....++...+..-..+ .+. .....-+....+...+..
T Consensus 325 ~n~~~f~is~~LT~~Gl~~~~~VI~~~F~yl~~l~~~~~~~~~f~Elq~v~~l~f--~y~--~~t~~~~~~~~l~~~m~~ 400 (937)
T COG1025 325 GNYGVFAISYELTDKGLAHYDRVIALTFQYLNLLREKGIPKYTFDELQNVLDLDF--RYP--SKTRPMDYVSWLADNMER 400 (937)
T ss_pred CCcceEEEEeehhhcchhhHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhh--ccc--ccCChHHHHHHHHHhccc
Confidence 79999999988655 45688999999999999999999999998776544433 332 222334445454444433
Q ss_pred CCCccCHHHHHHHHHHHcCCCCHHHHHHHHHHhcccCCeEEEEeCCCCCCC-----------HHHHH-HHHHHHHhhhc-
Q 001831 422 KEPIIGIEYEARLQKTLLPHISALEVSRYSEKLQTSCSCVIKTIEPQTFST-----------IDDLK-NIVLKIKNLEE- 488 (1008)
Q Consensus 422 ~~~~~~~~~~~~~~~~~i~~it~edv~~~~~~~l~~~~~~~~~~~p~~~~~-----------~~~~~-~~~~~~~~~~~- 488 (1008)
. +..... ...-.+..-++++++.+..... ++++.+..+++...-. ..++. +.+..|+....
T Consensus 401 ~-p~~~~~----~~~~~~~~yd~~~~~~~l~~~~-pen~R~~lis~~~~~~~~a~~~~~py~v~~~~~~~~~~~~~~~~~ 474 (937)
T COG1025 401 E-PVEHTL----YASLVLPRYDPKAIQERLALMT-PENARLWLISKLEEHDKAAYFYGFPYQVDDYTAQPLDAWQQKADS 474 (937)
T ss_pred C-Chhhhh----chhhcccccCHHHHHHHHHhhC-ccceEEEEecCCCCccccceeecCcceecchhhhhhhhhhccccc
Confidence 3 222111 1223477788999999997766 9999998888765311 11111 12222222111
Q ss_pred cCCC-CCCcCCCccccccCCCCCCceeEeEEecCCCeEEEEecCCcEEEEEecCC----CCCeEEEEEEecCcCCCCCcc
Q 001831 489 KNIS-PWDEENIPEEIVSTKPSPGNIVQQFEYENLGATELVLSNGMRVCYKCTDF----LDDQVLFTGFSYGGLSELPES 563 (1008)
Q Consensus 489 ~~i~-~~~~~~~p~~l~~~~~~~~~i~~~~~~~~~~~~~~~L~NGl~v~~~~~~~----~~~~v~~~~~~~gg~~~~~~~ 563 (1008)
.++. |...+.+|.++. .|...++.+. .+...-.-|.++|+++++. ++..+++.+..++.... +..
T Consensus 475 ~~l~lP~~N~fIp~~~~-------~~~~~~~~~~--p~ll~~~~~~~~wy~~~d~F~~~PK~~v~~~irsp~~~~s-~r~ 544 (937)
T COG1025 475 IELSLPEPNPFIPDDVS-------LIKSEKKFTF--PQLLSEDPNLRLWYLKEDYFAVEPKASVSLAIRSPHASRS-PRN 544 (937)
T ss_pred ccccCCCCCCCCCcccc-------ccccccCCCC--chhhhcCCCceEEEecCCccccCCcceeEEEEeCcccccC-HHH
Confidence 1111 111111222221 1222222221 1222333578999987653 23346666666655554 322
Q ss_pred hhhhhchhHHHhhhcCCCCCCHHHHHHHHcCceEEEEEEecceeEEEEEecChhhHHHHHHHHHHHhccCCCCCHHHHHH
Q 001831 564 EYLSCSMGSTIAGEIGVFGYRPSMLMDMLAGKRVEGGTKVGAYMRTFSGDCSPSDLETALQLVYQLFTTNVAPGEEEVEI 643 (1008)
Q Consensus 564 ~g~~~~l~~~l~~~~g~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~ll~~~l~~p~~~~~~~~~~ 643 (1008)
. +...+...+.+ ..+..+ .......|.+++...+...+.+++++.++.++.++..+.+.+..-.. +++.|+.
T Consensus 545 ~-Vl~~l~~~la~-dal~~~-----~y~A~~aG~sfs~~~~~~Gl~ltisGft~~lp~L~~~~l~~l~~~~~-~~~~f~~ 616 (937)
T COG1025 545 Q-VLTELYAYLAN-DALDKL-----SYQASLAGLSFSLAANSNGLDLTISGFTQRLPQLLRAFLDGLFSLPV-DEDRFEQ 616 (937)
T ss_pred H-HHHHHHHHHHH-HHHHhh-----hhHHHhcceEEEeecCCCceEEEeeccccchHHHHHHHHHHHhcCCC-CHHHHHH
Confidence 2 12112222221 111111 12233457777888888899999999999999999999999987444 8999999
Q ss_pred HHHHHHHHHHHh-hcChHHHHHHHHHHHhcCCCCcCCCCChhhhhcCChhHHHHHHhhhhCCCCCcEEEEEecCCccchH
Q 001831 644 VMQMAEEVIRAQ-ERDPYTAFANRVKEINYGNSYFFRPIRISDLQKVDPLKACDYFNSCFKDPSTFTVVIVGNIDPSNGI 722 (1008)
Q Consensus 644 ~k~~~~~e~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~lt~~~l~~~~~~~~~~~~~~~l~i~Gd~~~~~~~ 722 (1008)
.|..+.+++++. ...|...+.+.+..++- ...+...-..+.++.++.+++..|... ++++.....+|.||+..+++.
T Consensus 617 ~K~~~~~~~~~a~~~~p~~~~~~~l~~l~~-~~~~s~~e~~~~l~~v~~~e~~~f~~~-l~~~~~lE~lv~Gn~~~~da~ 694 (937)
T COG1025 617 AKSQLSEELKNALTGKPYRQALDGLTGLLQ-VPYWSREERRNALESVSVEEFAAFRDT-LLNGVHLEMLVLGNLTEADAT 694 (937)
T ss_pred HHHHHHHHHHhhhhcCCHHHHHHHhhhhhC-CCCcCHHHHHHHhhhccHHHHHHHHHH-hhhccceeeeeeccchHHHHH
Confidence 999999999988 45688888777777663 233333336888999999999999996 557899999999999999999
Q ss_pred HHHHHhhccCCCCCCCCCccccCCCCCCCcCCCCccceeEEeCCCCCcceEEEEEeeccCCCCcchHhHHHHHHHHHHHH
Q 001831 723 PLILQYLGGIPKPPEPILHFNRDNLKGLPFTFPSSIIREVVRSPMVEAQCSVQLCFPVELKNGTMVEEINYVGFLSKLLE 802 (1008)
Q Consensus 723 ~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~L~~~l~ 802 (1008)
++++.....++...... .++..+..+.+.........+....+-..+.+...+. + .+...+..++++++.
T Consensus 695 ~l~~~~~~~l~~~~s~~-------~~~~~~~~~~~~~~~~e~~~~~~~~an~~i~~~~~~~--~-~~~~a~s~Ll~~l~~ 764 (937)
T COG1025 695 NLAETLQKKLPAIGSTW-------YRNPSVYLLKGGTRIFETVGGESDSANAAILYPQQYD--E-IKSSALSSLLGQLIH 764 (937)
T ss_pred HHHHHHHhhhcccCCcc-------cCCCceeccCCCeeEeeeccCCcccccceeEeccccc--h-HHHHHHHHHHHHHHh
Confidence 98887666665443321 1222222333322222222222233334444555444 2 334556678999999
Q ss_pred HHHHHHHhhhcCCeeeeeeeeeccCCCCCCCCCcceeEEEEEEe-CcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 001831 803 TKMMQVLRFKHGQIYSASVSVFLGGNKHSRTGDVRGDISINFSC-DPEISFKLVDLALDEISRLQKEGPSDEDVSTILEL 881 (1008)
Q Consensus 803 s~L~~~lRe~~gl~Y~~~~~~~~~~~~~~~~~~~~g~~~i~~~~-~~~~~~~~~~~~~~~l~~i~~~~is~~el~~ak~~ 881 (1008)
..+|.+||+|.++.|.|+++....... ..+.|.+.... .|+...+.++.+.+.+..... ++++++|+..|+.
T Consensus 765 ~~ff~~LRTkeQLGY~Vfs~~~~v~~~------~gi~f~vqS~~~~p~~L~~r~~~F~~~~~~~l~-~ms~e~Fe~~k~a 837 (937)
T COG1025 765 PWFFDQLRTKEQLGYAVFSGPREVGRT------PGIGFLVQSNSKSPSYLLERINAFLETAEPELR-EMSEEDFEQIKKA 837 (937)
T ss_pred HHhHHHhhhhhhcceEEEecceeecCc------cceEEEEeCCCCChHHHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHH
Confidence 999999999999999999987754311 12233344332 455677778888887776655 5999999999999
Q ss_pred HHHHHHhhccchHHHHHHHHHhhccccccCCCCcchhhchhhHHHHHhcCCHHHHHHHHHHhcCC
Q 001831 882 EQRAHETGLQENYHWLDRILCSYQSRVYSGDVGTSFKIQDEARSKVRKSLQPLTLQLALQRIMPY 946 (1008)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vT~edi~~~a~~~l~~ 946 (1008)
+++++..+..+....+.++...+..+ ..++++. +...+.++.+|.+++..++.+.+..
T Consensus 838 lin~il~~~~nl~e~a~r~~~~~~~g--~~~Fd~~-----ek~i~~vk~LT~~~l~~f~~~~l~~ 895 (937)
T COG1025 838 LINQILQPPQNLAEEASRLWKAFGRG--NLDFDHR-----EKKIEAVKTLTKQKLLDFFENALSY 895 (937)
T ss_pred HHHHHHccCCCHHHHHHHHHHHhccC--CCCcCcH-----HHHHHHHHhcCHHHHHHHHHHhhcc
Confidence 99999987766655555554332211 1244443 7788999999999999999998876
No 4
>COG1026 Predicted Zn-dependent peptidases, insulinase-like [General function prediction only]
Probab=100.00 E-value=1.4e-60 Score=535.10 Aligned_cols=875 Identities=15% Similarity=0.131 Sum_probs=593.2
Q ss_pred cEEEEcCCCcEEEEeecCCCCceEEEEEEEcccCCCCCCCCCChhHHHHHHccCCCCCCChhhHHHHHHHcccccCCCcc
Q 001831 38 VDYGRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDIIKFLESIGAEFGACQN 117 (1008)
Q Consensus 38 i~~~~L~NGl~v~~~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ahllehl~f~gs~~~~~~~~~~~l~~~g~~~g~~~n 117 (1008)
+....-++|++++-+.++++.++ ++++| ..+|.+..|+||.|||++||||++||-++. ++...+.++++++|
T Consensus 22 ~~~~H~~TGa~l~hi~~~d~~~v--Fsi~F----~T~p~dstGVaHiLEHtvlcGS~kYPvkdP--F~~ml~rSLntF~N 93 (978)
T COG1026 22 YILEHEKTGAELAHIKNEDPNNV--FSIAF----KTEPHDSTGVAHILEHTVLCGSKKYPVKDP--FFKMLKRSLNTFLN 93 (978)
T ss_pred EEEeeccCCceEEEecCCCcCce--EEEEe----ecCCCCCCCcchHHHHHhhhCCCCCCCCCh--HHHHHHHhHHHHHh
Confidence 56667779999998888877643 44444 568999999999999999999999999887 45555566788899
Q ss_pred ccccCCeEEEEEECCCCCHHHHHHHHHHHHHhccCCCCChHHHHHH--------------HHHHHHHHhcCCCchh-hhH
Q 001831 118 AVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEKE--------------RGAVLEEYRGNRNASG-RMQ 182 (1008)
Q Consensus 118 a~T~~d~t~y~~~~~~~~~~~l~~~l~~l~d~~~~p~~~~~~~~~e--------------r~~v~~e~~~~~~~~~-~~~ 182 (1008)
|+|+.|.|+|.++... ++++-+.|.++.|.+++|.++++.|.+| +|+|++||++...+++ .++
T Consensus 94 A~T~~D~T~YP~sS~~--~~Df~NLl~VYlDavf~PlL~~e~F~QEgwr~e~~~~~~l~~~GVVyNEMKGa~ss~~~~~~ 171 (978)
T COG1026 94 AFTFPDKTVYPASSAN--EKDFYNLLSVYLDAVFHPLLTKESFLQEGWRIEFKDESNLKYKGVVYNEMKGAYSSGESVLS 171 (978)
T ss_pred hccCCCcceeeccccC--cchHHHHHHHHHHhhhCcccchHHHhhhhhccccCCCccceeeeEEeehhcccccCchhHHH
Confidence 9999999999998774 6679999999999999999999999877 6899999999976654 669
Q ss_pred HHHHHHHhcCCCCCccCCCCCHHHhcCCCHHHHHHHHHhcccCCCcEEEEEccCCCHHHHHHHHHHh-hcCCCCCCCCCC
Q 001831 183 DAHWVLMMEGSKYAECLPIGLEKVIRTVSSDTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVELINTH-FGQKKSATDPPV 261 (1008)
Q Consensus 183 ~~~~~~~~~~~p~~~~~~~g~~~~i~~it~~~l~~f~~~~y~p~n~~l~i~Gdi~d~~~~~~~i~~~-f~~~~~~~~~~~ 261 (1008)
+.+..++|++..|+ ...+|.+..|..+|.+++++||+++|+|+|+.++++|++ +.+++++.|++. |..........+
T Consensus 172 ~~~~~slfp~~ty~-~~SGG~P~~I~~LtyE~~r~FHkk~Y~pSN~~i~~yGni-~~~~~L~~iee~~l~~~~k~~~~~~ 249 (978)
T COG1026 172 RAMQQSLFPGTTYG-VNSGGDPKNIPDLTYEEFRAFHKKHYHPSNCKIFVYGNI-PTERLLDFIEEKVLRPFGKRELDVP 249 (978)
T ss_pred HHHHHhhCCCcccc-ccCCCCcccccccCHHHHHHHHHHhCCccceEEEEECCC-CHHHHHHHHHHhhhccccccccCCC
Confidence 99999999999999 899999999999999999999999999999999999999 999999999987 554444332111
Q ss_pred CCCCCCCCCCCCceEE----EecCCCCceEEEEEEEcCCCcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeeeee
Q 001831 262 IPKFPVPSHQEPRFSC----FIESEAGGSAVIVSYKMPVNELKTIKDYKEMLTESMFLHALNQRFFKLSRRKDPPYFSCS 337 (1008)
Q Consensus 262 ~~~~~~~~~~~~~~~~----~~~~~~~~~~v~l~~~~p~~~~~~~~~~~~~~l~~il~~~~~srL~~~lr~~~g~~~~~~ 337 (1008)
.+.............. ....+..+..+.++|.+++. .+..+.+++.+|..+|.+.-.++|.+.+.+..-....++
T Consensus 250 i~~~~~~~~~~~~~~~ypi~~~~~de~q~~~~lsWl~~~~-~d~~~~lal~vL~~iLl~~~asPl~~~liesglg~~~~~ 328 (978)
T COG1026 250 IPDQKAFKKPRRKVLEYPISFDEEDEDQGLLSLSWLGGSA-SDAEDSLALEVLEEILLDSAASPLTQALIESGLGFADVS 328 (978)
T ss_pred CCcccccCcccccceeeccCCCCCCCceeEEEEEEecCCc-ccHHHHHHHHHHHHHHccCcccHHHHHHHHcCCCccccc
Confidence 1111110011111111 12345678999999999875 466788999999999999999999999986543324444
Q ss_pred eccCcccccccEEEEEEE-ecCCcHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhccCCcHHHHHHHH
Q 001831 338 ASADDLVRPLKAYIMSSS-CKERGTLKALESMLIEVARVRLHGFSEREVSVARALLMSEVESAYLERDQMQSTNLRDECL 416 (1008)
Q Consensus 338 ~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~i~~~l~~l~~~g~s~~el~~ak~~l~~~~~~~~~~~~~~~~~~~~~~~~ 416 (1008)
..+.+. ....+|.+.+. +..++.++.-+.++++|+.+.++||.++.++.++.++...+... ....+...+....+
T Consensus 329 g~~~~~-~~~~~f~v~~~gv~~ek~~~~k~lV~~~L~~l~~~gi~~~~ie~~~~q~E~s~ke~---~s~pfgl~l~~~~~ 404 (978)
T COG1026 329 GSYDSD-LKETIFSVGLKGVSEEKIAKLKNLVLSTLKELVKNGIDKKLIEAILHQLEFSLKEV---KSYPFGLGLMFRSL 404 (978)
T ss_pred ceeccc-cceeEEEEEecCCCHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhhh---cCCCccHHHHHHhc
Confidence 433333 33446666654 66688888889999999999999999999999999988765543 44456667777777
Q ss_pred HHhhcCCCccCHHHHHHHHHHHcCCCCHHH-HHHHHHHhcccCC-eEEEEeCCCCCC-------------------CHHH
Q 001831 417 QHFLCKEPIIGIEYEARLQKTLLPHISALE-VSRYSEKLQTSCS-CVIKTIEPQTFS-------------------TIDD 475 (1008)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~i~~it~ed-v~~~~~~~l~~~~-~~~~~~~p~~~~-------------------~~~~ 475 (1008)
..|.+|......-.....+...-+.+.... +.+++++||-.++ .+++++.|+... +.++
T Consensus 405 ~gw~~G~dp~~~Lr~~~~~~~Lr~~le~~~~fe~LI~ky~l~N~h~~~v~~~Ps~~~~~~~ekee~e~L~~~~~~l~de~ 484 (978)
T COG1026 405 YGWLNGGDPEDSLRFLDYLQNLREKLEKGPYFEKLIRKYFLDNPHYVTVIVLPSPELEEKLEKEERELLQKRSSELTDED 484 (978)
T ss_pred cccccCCChhhhhhhHHHHHHHHHhhhcChHHHHHHHHHhhcCCccEEEEEecChHHHHHHHHHHHHHHHHHHhhcCHHH
Confidence 777887544432222223333333444444 8999999977666 888899998752 2333
Q ss_pred HHHHHHHHHhhhccCCCCCCcCCCccccccCCCCC--CceeEeEEecCCCeEEEEecCCcEEEEEecCCCCCeEEEEEEe
Q 001831 476 LKNIVLKIKNLEEKNISPWDEENIPEEIVSTKPSP--GNIVQQFEYENLGATELVLSNGMRVCYKCTDFLDDQVLFTGFS 553 (1008)
Q Consensus 476 ~~~~~~~~~~~~~~~i~~~~~~~~p~~l~~~~~~~--~~i~~~~~~~~~~~~~~~L~NGl~v~~~~~~~~~~~v~~~~~~ 553 (1008)
++++.++..+. +..+..+.|+......|.- +++.... +.. ..+..-.|..+|++++.. ..+.+++++++
T Consensus 485 ~~ki~~~~~~l-----ke~Q~~~dse~~~~~lP~l~~~dvp~~~--~k~-~l~~~~~~~~~v~~~~~~-tn~i~yl~~~~ 555 (978)
T COG1026 485 LEKIIKDSKKL-----KERQDQPDSEEDLATLPTLKLGDVPDPI--EKT-SLETEVSNEAKVLHHDLF-TNGITYLRLYF 555 (978)
T ss_pred HHHHHHHHHHH-----HHhhcCCCchhhhhhccccchhcCCCcc--ccc-ceeeeccCCcceEEeecC-CCCeEEEEEEe
Confidence 33333333322 2222233223222222221 1111110 111 123355678899888754 45569999999
Q ss_pred cCcCCCCCcchhhhhchhHHHhhhcCCCCCCHHHHHHHHcCceEEEEEE----ec-------ceeEEEEEecChhhHHHH
Q 001831 554 YGGLSELPESEYLSCSMGSTIAGEIGVFGYRPSMLMDMLAGKRVEGGTK----VG-------AYMRTFSGDCSPSDLETA 622 (1008)
Q Consensus 554 ~gg~~~~~~~~g~~~~l~~~l~~~~g~~~~~~~~l~~~l~~~g~~~~~~----~~-------~~~~~~~~~~~~~~l~~~ 622 (1008)
..+. .|.+..+..-++..++.+.||++++..++...++...++++++ ++ ...+.+++.++.++.+++
T Consensus 556 ~~~~--l~~~llpyL~L~~~~l~~lgt~~~~y~e~~~~i~~~TGgis~~~~~~~~~~~~~~~~~~~~i~~K~l~~k~~~~ 633 (978)
T COG1026 556 DLDM--LPSELLPYLPLFAFALTNLGTETYSYKELLNQIERHTGGISVSLSVDTDPGDDGEYRPSFSISGKALRSKVEKL 633 (978)
T ss_pred ecCC--CChhhhhhHHHHHHHHHhcCCCCcCHHHHHHHHHHHhCCceeeEeeccCCCccccccceEEEEEEehhhhhhHH
Confidence 7644 4544433333344455569999999999998888765443333 32 237789999999999999
Q ss_pred HHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHhhcC-hHHHHHHHHHHHhcCCCCcCCCC----ChhhhhcCC-------
Q 001831 623 LQLVYQLFTTNVAPGEEEVEIVMQMAEEVIRAQERD-PYTAFANRVKEINYGNSYFFRPI----RISDLQKVD------- 690 (1008)
Q Consensus 623 l~ll~~~l~~p~~~~~~~~~~~k~~~~~e~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~----~~~~i~~lt------- 690 (1008)
++++.+++.++.|-|.+++..+..+..+.+.+...+ +..++.......++....+.... ..+-|..+.
T Consensus 634 ~~~i~~~l~~~~F~D~~Rlkell~q~~~~l~~~vr~sG~~~A~~~~~s~~~~~~~l~e~~~Gl~q~k~i~~l~~~~~~~~ 713 (978)
T COG1026 634 FELIREILANTDFHDRERLKELLEQYLSDLTSSVRNSGHSIASSLANSRLSSAGALKELLNGLSQVKFLRELSSNFEENF 713 (978)
T ss_pred HHHHHHHHhcCCcCcHHHHHHHHHHHHhhhHHhhhccchHHHHHHhhcccccchhHHHHhcChhHHHHHHHHHHhhcccc
Confidence 999999999999978888888888888888777655 44444444333333322222111 122222221
Q ss_pred ----hhHHHHHHhhhhCCCCCcEEEEEecCCccchHHHHHHhhccCCCCCCCCCccccCCCCCCCcCCCCccceeEEeCC
Q 001831 691 ----PLKACDYFNSCFKDPSTFTVVIVGNIDPSNGIPLILQYLGGIPKPPEPILHFNRDNLKGLPFTFPSSIIREVVRSP 766 (1008)
Q Consensus 691 ----~~~l~~~~~~~~~~~~~~~l~i~Gd~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 766 (1008)
.+.|++.+++.+ +.+|+.++|.|+.+ .+.+.+++.|-.+...-.+.... ...+.+..... .+.....+..+
T Consensus 714 ~~ei~~kL~~l~~~i~-~~~n~~i~i~~~~~--~~~~~~e~~l~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~ii~ 788 (978)
T COG1026 714 EKEIADKLQALRKKIF-QTNNLRIAIIGDID--KILDLLENPLLKFLEHLLPGFEL-PTPPKNPHLDL-ISSLSEATIIP 788 (978)
T ss_pred cHHHHHHHHHHHHHHh-hcCceEEEEecChh--hhHHHHHHHhhhhhcccCccccc-CCCCCCcchhh-hccccceEEec
Confidence 345667777655 55888899999874 33444444443333210110000 00111111111 11012223332
Q ss_pred CCCcceEEEEEee---ccCCCCcchHhHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeeeeeccCCCCCCCCCcceeEEEE
Q 001831 767 MVEAQCSVQLCFP---VELKNGTMVEEINYVGFLSKLLETKMMQVLRFKHGQIYSASVSVFLGGNKHSRTGDVRGDISIN 843 (1008)
Q Consensus 767 ~~~~~~~v~~~~~---~~~~~~~~~~~~~~~~~L~~~l~s~L~~~lRe~~gl~Y~~~~~~~~~~~~~~~~~~~~g~~~i~ 843 (1008)
. +.+...++|+ .++.+|+++...++..+|+ .+.||..+|++ |++||++++... ..|.|+++
T Consensus 789 ~--p~a~~~l~fs~~~~~y~hpd~~~l~vls~~L~---~~~lw~~IR~~-GGAYGa~as~~~----------~~G~f~f~ 852 (978)
T COG1026 789 S--PVAYNALAFSIGGLPYTHPDYAALQVLSEYLG---SGYLWNKIREK-GGAYGASASIDA----------NRGVFSFA 852 (978)
T ss_pred c--HHHHHHHhhhccCCCCCCccchHHHHHHHHhc---cchhHHHHHhh-cccccccccccc----------CCCeEEEE
Confidence 2 2233333443 2677787776555555555 77999999975 999999988764 57899999
Q ss_pred EEeCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccchHHHHHHHHHhhccccccCCCCcchhhchhh
Q 001831 844 FSCDPEISFKLVDLALDEISRLQKEGPSDEDVSTILELEQRAHETGLQENYHWLDRILCSYQSRVYSGDVGTSFKIQDEA 923 (1008)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~l~~i~~~~is~~el~~ak~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 923 (1008)
.+.+|+ +-+.++++.+.++.+..+.++++|+++++...++.+..+...... ...-...+.+++ ..+. .+.
T Consensus 853 sYRDPn-~~kt~~v~~~~v~~l~s~~~~~~d~~~~ilg~i~~~d~p~sp~~~-~~~s~~~~~sg~---~~~~-----~qa 922 (978)
T COG1026 853 SYRDPN-ILKTYKVFRKSVKDLASGNFDERDLEEAILGIISTLDTPESPASE-GSKSFYRDLSGL---TDEE-----RQA 922 (978)
T ss_pred ecCCCc-HHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhhcccccccCCcce-ehhhHHHHHhcC---CHHH-----HHH
Confidence 999996 557799999999999998999999999999999988876422211 000011111221 1222 278
Q ss_pred HHHHHhcCCHHHHHHHHHHhcCCCCCCceEEEEEecCchhhHHHHhhhc
Q 001831 924 RSKVRKSLQPLTLQLALQRIMPYPCNKQFTVVILMPQVSRFKFLRSLFR 972 (1008)
Q Consensus 924 ~~~~i~~vT~edi~~~a~~~l~~~~~~~~~~~i~~p~~~~~~~l~~~~~ 972 (1008)
+++.|.+||++||..+.++||.+ |.+..++++++.++...+..+.++.
T Consensus 923 ~re~~l~vt~~di~~~~~~yl~~-~~~e~~i~~~~~~e~~~e~~~~~g~ 970 (978)
T COG1026 923 FRERLLDVTKEDIKEVMDKYLLN-FSSENSIAVFAGEEKPQENFETLGF 970 (978)
T ss_pred HHHHHhcCcHHHHHHHHHHHHhc-ccccceEEEEechhhhhhhhhhcCc
Confidence 89999999999999999999986 4466666666667767777666443
No 5
>KOG0959 consensus N-arginine dibasic convertase NRD1 and related Zn2+-dependent endopeptidases, insulinase superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.1e-58 Score=526.87 Aligned_cols=865 Identities=17% Similarity=0.189 Sum_probs=604.3
Q ss_pred cCcccceeecccCccccCCCCCCcEEEEcCCCcEEEEeecCCCCceEEEEEEEcccCCCCCCCCCChhHHHHHHccCCCC
Q 001831 15 HGFRSLKLVSFDLNEELGEQPFGVDYGRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATE 94 (1008)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~L~NGl~v~~~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ahllehl~f~gs~ 94 (1008)
+++..++..-.+. .+.+.|.+.++..+|+|||++++++++.+. ..++.+.|++||..||.+.+|+|||+|||+|.||+
T Consensus 6 ~~~~~~~~~~~~~-~k~~~d~r~yr~~~L~Ngl~alLisDp~tD-~ssaal~V~vGS~~DP~dl~GLAHF~EHMlFmGS~ 83 (974)
T KOG0959|consen 6 SGNIVLKREDVSI-VKSLGDTREYRGIELTNGLRALLISDPKTD-KSSAALDVKVGSFSDPEDLQGLAHFCEHMLFMGSE 83 (974)
T ss_pred ccchhhhhccccc-ccCCCCccceeEEEecCCceEEEecCCCCC-ccceeeeeeccccCCccccccHHHHHHHHHhhccc
Confidence 3444444444432 344556667999999999999999997654 68999999999999999999999999999999999
Q ss_pred CCChh-hHHHHHHHcccccCCCccccccCCeEEEEEECCCCCHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhc
Q 001831 95 KYTNH-DIIKFLESIGAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEKERGAVLEEYRG 173 (1008)
Q Consensus 95 ~~~~~-~~~~~l~~~g~~~g~~~na~T~~d~t~y~~~~~~~~~~~l~~~l~~l~d~~~~p~~~~~~~~~er~~v~~e~~~ 173 (1008)
+||.. ++..++.+. ||..||+|+.|+|+|++.+. .++++.||+.+++++.+|+|+++.+++|+.+|.+|.++
T Consensus 84 KYP~En~y~~~lsk~----gGssNA~T~~e~T~y~F~V~---~~~l~~ALDrFaqFf~~Plf~~~a~eREv~AVdSE~~~ 156 (974)
T KOG0959|consen 84 KYPDENEYSKFLSKN----GGSSNAYTDSEHTNYYFDVQ---HDHLEGALDRFAQFFSDPLFNKSATEREVGAVDSEHEK 156 (974)
T ss_pred cCCCcchhHHHHHhc----CCccccccccccceEEEecc---hHHHHHHHHHHHHHhhCcccChHHHHHHHHHHHHHHHh
Confidence 99964 566777544 56689999999999999996 45699999999999999999999999999999999999
Q ss_pred CCCc-hhhhHHHHHHHHhcCCCCCccCCCCCHHHhcCCC-----HHHHHHHHHhcccCCCcEEEEEccCCCHHHHHHHHH
Q 001831 174 NRNA-SGRMQDAHWVLMMEGSKYAECLPIGLEKVIRTVS-----SDTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVELIN 247 (1008)
Q Consensus 174 ~~~~-~~~~~~~~~~~~~~~~p~~~~~~~g~~~~i~~it-----~~~l~~f~~~~y~p~n~~l~i~Gdi~d~~~~~~~i~ 247 (1008)
+... .++..+......-++|||+ ++++|+.++|.... ++.|+.||++||.+++|+|+|+|+. +.+.++.++.
T Consensus 157 nl~~D~wr~~ql~~~l~~~~hp~~-kF~tGN~~tL~~~p~~~~~r~~L~kF~k~~Yssn~M~l~i~G~e-slD~Le~lv~ 234 (974)
T KOG0959|consen 157 NLNSDGWRFDQLLRSLSNPGHPYS-KFSTGNKKTLLEGPREIDLRDELLKFYKNWYSSNIMTLVIVGKE-SLDVLESLVT 234 (974)
T ss_pred ccCcchhHHHHHHHHhcCCCCcch-hccccchhhhhhccccchHHHHHHHHHHhhcccccceEEEEcCC-ChhHHHHHHH
Confidence 8655 4455544444455899999 99999999999999 9999999999999999999999999 9999999999
Q ss_pred HhhcCCCCCCCCCCCCCCCCC-C-CCCCceEEEecCCCCceEEEEEEEcCCCcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 001831 248 THFGQKKSATDPPVIPKFPVP-S-HQEPRFSCFIESEAGGSAVIVSYKMPVNELKTIKDYKEMLTESMFLHALNQRFFKL 325 (1008)
Q Consensus 248 ~~f~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~v~l~~~~p~~~~~~~~~~~~~~l~~il~~~~~srL~~~ 325 (1008)
+.|+.+++...+. |.++.+ . ...-+..+.+.+......+.|.|+.|+.. .....-..+++.+++|..-.+.|...
T Consensus 235 ~~F~~i~N~~~~~--p~f~~~p~~~e~~~~~~~v~pik~~~~l~is~~~p~~~-~~y~~kP~~y~~hLigheg~GSL~~~ 311 (974)
T KOG0959|consen 235 RLFDEISNKKKPR--PVFPEPPFLPEELKKLVRVVPIKDGRSLMISWPVPPLN-HHYKSKPLRYLSHLIGHEGPGSLLSY 311 (974)
T ss_pred HHcccccccCCCC--CcccCCCCChHHhCcEEEEEeccccceEEEEEecCCcc-cccccCcHHHHHHHhccCCcchHHHH
Confidence 9999998876554 333332 1 11233445566667788999999999753 23334456678888887444556677
Q ss_pred hccCCCCeeeeeeccCcccccccEEEEEEEecC---CcHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHh
Q 001831 326 SRRKDPPYFSCSASADDLVRPLKAYIMSSSCKE---RGTLKALESMLIEVARVRLHGFSEREVSVARALLMSEVESAYLE 402 (1008)
Q Consensus 326 lr~~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~i~~~l~~l~~~g~s~~el~~ak~~l~~~~~~~~~~ 402 (1008)
|+ +.||+.+..++......+.+.|.+.+..+. ++.++++..+++.|+.++..|...+-++.....- ...+.+.+
T Consensus 312 Lk-~~gw~~sl~a~~~~~as~~~~f~v~idLtd~G~e~~~~ii~~~f~yi~~l~~~~~~~~i~~E~~~~~--~~~Frf~~ 388 (974)
T KOG0959|consen 312 LK-RLGWATSLEAGIPEFASGYSFFNVSIDLTDEGLEHVDEIIGLVFNYIKLLQSAGPEKWIFKELQLIS--EVKFRFQD 388 (974)
T ss_pred HH-HhhchheeecCCCccccccceEEEEEEeccccchhHHHHHHHHHHHHHHHHhcCchhHHHHHHHHhh--hhheeecc
Confidence 76 679999999988866688899999998665 4568999999999999999999888787665433 33333433
Q ss_pred hccCCcHHHHHHHHHHhhcCCCccCHHHHHHHHHHHcCCCCHHHHHHHHHHhcccCCeEEEEeCCCCCC-----------
Q 001831 403 RDQMQSTNLRDECLQHFLCKEPIIGIEYEARLQKTLLPHISALEVSRYSEKLQTSCSCVIKTIEPQTFS----------- 471 (1008)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~it~edv~~~~~~~l~~~~~~~~~~~p~~~~----------- 471 (1008)
.. ++...+..+..++.+ ++...... -...+....++-++.+.. .+.|.++.+++..-....
T Consensus 389 k~--~p~~~~~~~~~nlq~---~P~~~il~--~~~ll~~~~p~~i~~~~~-~L~p~n~~v~~~s~~~~~~~d~~E~~ygt 460 (974)
T KOG0959|consen 389 KE--PPMEYASEIASNLQY---YPVEDVLT--GSYLLTEFDPDLIQEVLS-SLVPSNMRVILVSRSFEGKTDKAEPWYGT 460 (974)
T ss_pred cC--CcHHHHHHHHhhccc---CChHHhhc--chhhhhhcChHHHHHHHH-hcCcccceeeeeeeccccccccccceecc
Confidence 32 445555555555442 11111111 113466788888888774 467888777665543321
Q ss_pred --CHHHHH-HHHHHHHhhhccCCCCCCcCCCccccccC-CCC-CCceeEeEEecCCCeEEEEecCCcEEEEEecCCC-CC
Q 001831 472 --TIDDLK-NIVLKIKNLEEKNISPWDEENIPEEIVST-KPS-PGNIVQQFEYENLGATELVLSNGMRVCYKCTDFL-DD 545 (1008)
Q Consensus 472 --~~~~~~-~~~~~~~~~~~~~i~~~~~~~~p~~l~~~-~~~-~~~i~~~~~~~~~~~~~~~L~NGl~v~~~~~~~~-~~ 545 (1008)
..+++. ++.+.|.+. . ..+--..+.|..++.. ... +.++ ...++| +-+.-.-..++|+++++.. .+
T Consensus 461 ~y~~e~i~~~~~~~~~~~-~--~~~~l~lP~~nefI~t~f~~~~~~~-~~~~~P----~Li~~~~~~~lw~k~dd~f~~P 532 (974)
T KOG0959|consen 461 AYKVEDIPAEIIKEWENS-H--LNPELHLPTPNEFIPTDFSILPAPI-PKLEYP----VLISDTPFSELWYKQDDKFNVP 532 (974)
T ss_pred ccccccCCHHHHHHhhcc-C--ccccccCCCCCcccccccccccccC-ccccCC----eeeecCCcceeEEecccccccc
Confidence 112222 233333211 1 1100001112222210 000 1111 111122 2223334689999998632 23
Q ss_pred eEEEEE--EecCcCCCCCcchhhhhchhHHHhhhcCCCCCCHHHHHHHHcCceEEEEEEecceeEEEEEecChhhHHHHH
Q 001831 546 QVLFTG--FSYGGLSELPESEYLSCSMGSTIAGEIGVFGYRPSMLMDMLAGKRVEGGTKVGAYMRTFSGDCSPSDLETAL 623 (1008)
Q Consensus 546 ~v~~~~--~~~gg~~~~~~~~g~~~~l~~~l~~~~g~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l 623 (1008)
..++.+ ..++.. ..+....++.++..++.. .+....+. ....|.+++.+.+.....+++++.+++++.++
T Consensus 533 ka~~~~~~~~p~~~-~~~~~~~l~~l~~~~l~d-----~l~E~~Y~--A~~aGl~~~~~~s~~G~~~~v~Gfnekl~~ll 604 (974)
T KOG0959|consen 533 KAYTKFDFICPGAT-QSPLNSVLSTLYVRLLKD-----QLNEYLYP--ALLAGLTYSLSSSSKGVELRVSGFNEKLPLLL 604 (974)
T ss_pred hhheeeeecCcccc-cCHHHHHHHHHHHHHHHH-----HHhHHHHH--HHhccceEEeeecCCceEEEEeccCcccHHHH
Confidence 344444 334433 345556666665555442 23323333 33456667777777778888888999999999
Q ss_pred HHHHHHhccCCCCCHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHHhcCCCCcCCCCChhhhhcCChhHHHHHHhhhhC
Q 001831 624 QLVYQLFTTNVAPGEEEVEIVMQMAEEVIRAQERDPYTAFANRVKEINYGNSYFFRPIRISDLQKVDPLKACDYFNSCFK 703 (1008)
Q Consensus 624 ~ll~~~l~~p~~~~~~~~~~~k~~~~~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~lt~~~l~~~~~~~~~ 703 (1008)
+.+.+++.+-. +++++|+.+++.+..++++...+.....+..+..++.....|......+.++.++.+++..|..+ |.
T Consensus 605 ~~~~~~~~~f~-~~~~rf~iike~~~~~~~n~~~~~p~~~a~~~~~lll~~~~W~~~e~~~al~~~~le~~~~F~~~-~~ 682 (974)
T KOG0959|consen 605 EKVVQMMANFE-LDEDRFEIIKELLKRELRNHAFDNPYQLANDYLLLLLEESIWSKEELLEALDDVTLEDLESFISE-FL 682 (974)
T ss_pred HHHHHHHHhcc-ccHHHHHHHHHHHHHHHhhhhhccHHHHHHHHHHHHhhccccchHHHHHHhhcccHHHHHHHHHH-Hh
Confidence 99999777643 49999999999999999996554444555556666667777777667888899999999999996 66
Q ss_pred CCCCcEEEEEecCCccchHHHHHHhhccCCCCC-CCCCccccCCCCCCCcCCCCccceeEEeC-CCCCcceEEEEEeecc
Q 001831 704 DPSTFTVVIVGNIDPSNGIPLILQYLGGIPKPP-EPILHFNRDNLKGLPFTFPSSIIREVVRS-PMVEAQCSVQLCFPVE 781 (1008)
Q Consensus 704 ~~~~~~l~i~Gd~~~~~~~~~i~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~-~~~~~~~~v~~~~~~~ 781 (1008)
++..++++|.||++.+++.++++...+.+.... .+.+-......+...+.+|.+........ ....+.+.+.+++++.
T Consensus 683 ~~~~~e~~i~GN~te~~A~~l~~~v~d~l~~~~~~~~p~~~~~~~~~~~~~lp~G~~~~~~~~~n~~~~ns~i~~~~Q~~ 762 (974)
T KOG0959|consen 683 QPFHLELLIHGNLTEKEALQLLKSVLDILKSAAPNSRPLFRSEHLPRREIQLPNGDYYFYRHLLNKTDDNSCIEVYYQIG 762 (974)
T ss_pred hhhheEEEEecCcchHHHHHHHHHHHhhhhccCCCCccccccccCcccceeccCCceEEEEcccccCCCCceEEEEEEcc
Confidence 799999999999999999998777776662221 11111111233444566777665433333 1234677777888864
Q ss_pred CCCCcchHhHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeeeeeccCCCCCCCCCcceeEEEEEE--eCcccHHHHHHHHH
Q 001831 782 LKNGTMVEEINYVGFLSKLLETKMMQVLRFKHGQIYSASVSVFLGGNKHSRTGDVRGDISINFS--CDPEISFKLVDLAL 859 (1008)
Q Consensus 782 ~~~~~~~~~~~~~~~L~~~l~s~L~~~lRe~~gl~Y~~~~~~~~~~~~~~~~~~~~g~~~i~~~--~~~~~~~~~~~~~~ 859 (1008)
..+ ......+.+++.++..++|..||++..+.|-+++...... +.-.+.+.++ ..++.++.-|+.+.
T Consensus 763 ~~~---~~~~~~~~L~~~li~ep~Fd~LRTkeqLGYiv~~~~r~~~--------G~~~~~i~Vqs~~~~~~le~rIe~fl 831 (974)
T KOG0959|consen 763 VQD---TRDNAVLGLLEQLIKEPAFDQLRTKEQLGYIVSTGVRLNY--------GTVGLQITVQSEKSVDYLEERIESFL 831 (974)
T ss_pred cch---hHHHHHHHHHHHHhccchHHhhhhHHhhCeEeeeeeeeec--------CcceeEEEEccCCCchHHHHHHHHHH
Confidence 333 2334467889999999999999999888898888776543 2222334333 45678888888888
Q ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHHHHhh-----ccchHHHHHHHHHhhccccccCCCCcchhhchhhHHHHHhcCCHH
Q 001831 860 DEISRLQKEGPSDEDVSTILELEQRAHETG-----LQENYHWLDRILCSYQSRVYSGDVGTSFKIQDEARSKVRKSLQPL 934 (1008)
Q Consensus 860 ~~l~~i~~~~is~~el~~ak~~~~~~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vT~e 934 (1008)
+.+.+...+ +++++++.-+..++...... .+...+|.+.....| ++++. +...+.++.+|.+
T Consensus 832 ~~~~~~i~~-m~~e~Fe~~~~~lI~~~~ek~~~l~~e~~~~w~ei~~~~y-------~f~r~-----~~~v~~l~~i~k~ 898 (974)
T KOG0959|consen 832 ETFLEEIVE-MSDEEFEKHKSGLIASKLEKPKNLSEESSRYWDEIIIGQY-------NFDRD-----EKEVEALKKITKE 898 (974)
T ss_pred HHHHHHHHh-cchhhhhhhHHHHHHHHhhcCcchhHHHHHHHHHHHhhhh-------cchhh-----HHHHHHHHhhhHH
Confidence 888777664 89999999999888776653 245567877766655 34433 5567789999999
Q ss_pred HHHHHHHHhcCC
Q 001831 935 TLQLALQRIMPY 946 (1008)
Q Consensus 935 di~~~a~~~l~~ 946 (1008)
|+..+...++..
T Consensus 899 ~~i~~f~~~~~~ 910 (974)
T KOG0959|consen 899 DVINFFDEYIRK 910 (974)
T ss_pred HHHHHHHhhccc
Confidence 999999999864
No 6
>KOG2019 consensus Metalloendoprotease HMP1 (insulinase superfamily) [General function prediction only; Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.9e-57 Score=474.11 Aligned_cols=875 Identities=15% Similarity=0.139 Sum_probs=608.4
Q ss_pred ccccCcccceeecccCccccCCCCCCcEEEEcCCCcEEEEeecCCCCceEEEEEEEcccCCCCCCCCCChhHHHHHHccC
Q 001831 12 AKKHGFRSLKLVSFDLNEELGEQPFGVDYGRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFS 91 (1008)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~L~NGl~v~~~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ahllehl~f~ 91 (1008)
..+|||......++. .+.+. -+....-+.|.+|+-+.++++.++ |.++.+..|++..||.|++||..+|
T Consensus 33 ~~~hgfevv~~~~Vp---El~l~--av~lkH~~Tgae~lhl~reD~N~v------FsI~FrTpp~dstGiPHILEHtvLC 101 (998)
T KOG2019|consen 33 DKKHGFEVVSEEFVP---ELKLT--AVLLKHKKTGAEVLHLDREDENNV------FSIVFRTPPKDSTGIPHILEHTVLC 101 (998)
T ss_pred ccccceEEeeeeech---hhhhh--heeeeecCCCceeEeeccCCCCce------eEEEeecCCCccCCCchhhhhheee
Confidence 577888877655552 11111 256667789999999988777643 4455577899999999999999999
Q ss_pred CCCCCChhhHHHHHHHcccccCCCccccccCCeEEEEEECCCCCHHHHHHHHHHHHHhccCCCCChHHHHHH--------
Q 001831 92 ATEKYTNHDIIKFLESIGAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEKE-------- 163 (1008)
Q Consensus 92 gs~~~~~~~~~~~l~~~g~~~g~~~na~T~~d~t~y~~~~~~~~~~~l~~~l~~l~d~~~~p~~~~~~~~~e-------- 163 (1008)
||.+||-++- +++.+.-++.+++||+|..|+|+|.+... |+.++.+..+++.|..+.|.+.+.+|.+|
T Consensus 102 GS~KYPvrdP--FfkmLnrSLatFmNAfT~pD~T~yPfatt--N~kDf~NL~dVYLDAtffPklr~~dF~QEGWr~Eh~d 177 (998)
T KOG2019|consen 102 GSRKYPVRDP--FFKMLNRSLATFMNAFTAPDYTFYPFATT--NTKDFYNLRDVYLDATFFPKLRKLDFQQEGWRLEHND 177 (998)
T ss_pred ccCcCcccCh--HHHHHHHHHHHHHhhccCCCcceeecccC--ChHHHHHHHHHhhhcccchHHHhhhhhhhcceeecCC
Confidence 9999998764 44444455667799999999999999876 47789999999999999999999999887
Q ss_pred ----------HHHHHHHHhcCCCchhhh-HHHHHHHHhcCCCCCccCCCCCHHHhcCCCHHHHHHHHHhcccCCCcEEEE
Q 001831 164 ----------RGAVLEEYRGNRNASGRM-QDAHWVLMMEGSKYAECLPIGLEKVIRTVSSDTVKRFYQKWYRLQNMAVIA 232 (1008)
Q Consensus 164 ----------r~~v~~e~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~g~~~~i~~it~~~l~~f~~~~y~p~n~~l~i 232 (1008)
|++|.+||++.-+++.++ ...+.+++|+++.|| ...+|++..|..++.+++++||++||+|+|+.++.
T Consensus 178 psd~~SpivfkGVVfNEMKG~~S~~~~if~~~~Qq~L~p~~tYg-v~SGGDPl~IpdLt~eelk~FHr~~YHPSNAri~t 256 (998)
T KOG2019|consen 178 PSDPISPIVFKGVVFNEMKGQYSDPDYIFGMLFQQALFPENTYG-VNSGGDPLDIPDLTYEELKEFHRQHYHPSNARIFT 256 (998)
T ss_pred CCCCcccceeeeeeeecccccccChhHHHHHHHHHhhCcccccc-ccCCCCcccCccccHHHHHHHHHhccCCCcceeEe
Confidence 799999999997766654 777789999999999 88999999999999999999999999999999999
Q ss_pred EccCCCHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCceEEE------ecCCCCceEEEEEEEcCCCcCCCHHHHH
Q 001831 233 VGDFPDTKGVVELINTHFGQKKSATDPPVIPKFPVPSHQEPRFSCF------IESEAGGSAVIVSYKMPVNELKTIKDYK 306 (1008)
Q Consensus 233 ~Gdi~d~~~~~~~i~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~v~l~~~~p~~~~~~~~~~~ 306 (1008)
+||+ ..++....+...|....++....+.. +..+ ...++..+. .+.+..|..+.+.|..+. +.+..+.++
T Consensus 257 YGn~-Pl~~~l~~l~e~~~~~sk~~~s~kv~-~qk~-f~kp~rvve~~p~d~~~~p~Kq~~~s~s~L~~~-p~d~~etfa 332 (998)
T KOG2019|consen 257 YGNF-PLEDLLKQLEEDFSPFSKRELSSKVT-FQKL-FDKPRRVVEKGPADPGDLPKKQTKCSNSFLSND-PLDTYETFA 332 (998)
T ss_pred ecCc-hHHHHHHHHHHhhcccccccccCccc-cccc-cccCceeeeecCCCCCCCccceeEEEEEeecCC-chhHHHHHH
Confidence 9999 99999999998887654433222211 1111 122222211 133456778888887765 457889999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCC-CCeeeeeeccCcccccccEEEEEEE-ecCCcHHHHHHHHHHHHHHHHhCCCCHHH
Q 001831 307 EMLTESMFLHALNQRFFKLSRRKD-PPYFSCSASADDLVRPLKAYIMSSS-CKERGTLKALESMLIEVARVRLHGFSERE 384 (1008)
Q Consensus 307 ~~~l~~il~~~~~srL~~~lr~~~-g~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~i~~~l~~l~~~g~s~~e 384 (1008)
+.++..++.++.+|++++.|.|.. |.-+++.+++... ...+.|.+.+. +..++++.+.+.|..+++.|.+.||..+.
T Consensus 333 L~~L~~Ll~~gpsSp~yk~LiESGLGtEfsvnsG~~~~-t~~~~fsVGLqGvseediekve~lV~~t~~~lae~gfd~dr 411 (998)
T KOG2019|consen 333 LKVLSHLLLDGPSSPFYKALIESGLGTEFSVNSGYEDT-TLQPQFSVGLQGVSEEDIEKVEELVMNTFNKLAETGFDNDR 411 (998)
T ss_pred HHHHHHHhcCCCccHHHHHHHHcCCCcccccCCCCCcc-cccceeeeeeccccHHHHHHHHHHHHHHHHHHHHhccchHH
Confidence 999999999999999999998765 4457788887765 45668888876 56678888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCcHHHHHHHHHHhhcC-CCccCHH--HHHHHHHHHcCCCCHHHHHHHHHHhcccC-Ce
Q 001831 385 VSVARALLMSEVESAYLERDQMQSTNLRDECLQHFLCK-EPIIGIE--YEARLQKTLLPHISALEVSRYSEKLQTSC-SC 460 (1008)
Q Consensus 385 l~~ak~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~i~~it~edv~~~~~~~l~~~-~~ 460 (1008)
+++..+++.- +...+...+.-.++..++..|.++ +|..... ...+.++..++.-...-++..+++|+.++ ++
T Consensus 412 ieAil~qiEi----slk~qst~fGL~L~~~i~~~W~~d~DPfE~Lk~~~~L~~lk~~l~ek~~~lfq~lIkkYilnn~h~ 487 (998)
T KOG2019|consen 412 IEAILHQIEI----SLKHQSTGFGLSLMQSIISKWINDMDPFEPLKFEEQLKKLKQRLAEKSKKLFQPLIKKYILNNPHC 487 (998)
T ss_pred HHHHHHHhhh----hhhccccchhHHHHHHHhhhhccCCCccchhhhhhHHHHHHHHHhhhchhHHHHHHHHHHhcCCce
Confidence 9987777655 445555556677777788888775 4544333 23344555666556777899999996654 57
Q ss_pred EEEEeCCCCCCC-------------------HHHHHHHHHHHHhhhccCCCCCCcCCCccccccCCCC-CCceeEeEEec
Q 001831 461 VIKTIEPQTFST-------------------IDDLKNIVLKIKNLEEKNISPWDEENIPEEIVSTKPS-PGNIVQQFEYE 520 (1008)
Q Consensus 461 ~~~~~~p~~~~~-------------------~~~~~~~~~~~~~~~~~~i~~~~~~~~p~~l~~~~~~-~~~i~~~~~~~ 520 (1008)
+++.+.|+.... ++++.++.++.... .. ....|+.+-+.+.. -.+|.....+.
T Consensus 488 ~t~smqpd~e~~~~~~~eE~tkL~ek~~alteeD~~ei~k~~~eL-----~~--kQ~tp~dlsClPtL~vsDIp~~~~~~ 560 (998)
T KOG2019|consen 488 FTFSMQPDPEFAEKLEQEEATKLEEKKAALTEEDLAEIAKAGEEL-----RE--KQSTPEDLSCLPTLNVSDIPKTIPYT 560 (998)
T ss_pred EEEEecCCchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHH-----HH--hhCCccccccccccccccCCCCCCcc
Confidence 778888887522 22222222211111 00 01112222111111 02333222222
Q ss_pred CCCeEEEEecCCcEEEEEecCCCCCeEEEEEEecCcCCCCCcchhhhhchhHHHhhhcCCCCCCHHHHHHHHcCceEEEE
Q 001831 521 NLGATELVLSNGMRVCYKCTDFLDDQVLFTGFSYGGLSELPESEYLSCSMGSTIAGEIGVFGYRPSMLMDMLAGKRVEGG 600 (1008)
Q Consensus 521 ~~~~~~~~L~NGl~v~~~~~~~~~~~v~~~~~~~gg~~~~~~~~g~~~~l~~~l~~~~g~~~~~~~~l~~~l~~~g~~~~ 600 (1008)
. .++..-||++|.+..... ++.+++++++.- ...|.+.....-++...+.+.||+..+..++++++..+.+.++
T Consensus 561 ~---~~v~dingvkv~~~dl~t-ngi~Y~r~~~~l--~~~p~eL~PylPlfc~sll~lGt~~lsf~el~qqI~rkTGGiS 634 (998)
T KOG2019|consen 561 K---LEVGDINGVKVQRCDLFT-NGITYTRVVFDL--NSLPEELLPYLPLFCQSLLNLGTGDLSFVELEQQIGRKTGGIS 634 (998)
T ss_pred c---eeeeeccCceeEEeeccC-CceEEEEEeecc--ccCcHHhhcchHHHHHHHHhcCCCcccHHHHHHHhhhhcCcee
Confidence 2 345677999999997654 456999998864 3467665444334444444599999999999999998765554
Q ss_pred EE--ecc--------eeEEEEEecChhhHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHH
Q 001831 601 TK--VGA--------YMRTFSGDCSPSDLETALQLVYQLFTTNVAPGEEEVEIVMQMAEEVIRAQERDPYTAFANRVKEI 670 (1008)
Q Consensus 601 ~~--~~~--------~~~~~~~~~~~~~l~~~l~ll~~~l~~p~~~~~~~~~~~k~~~~~e~~~~~~~p~~~~~~~~~~~ 670 (1008)
++ +.. -.+.+++.++..+++++++++..++.++.|-+++.|+...+...+++.+...+.+..++..-...
T Consensus 635 ~~p~~~s~~~~d~p~~~i~~~~~~l~rn~~dlfel~n~il~e~~f~n~dkfkvlvk~s~s~~~n~i~dsGH~~A~~rs~a 714 (998)
T KOG2019|consen 635 VSPLVSSDDGMDEPELGIVFSGSMLDRNADDLFELWNKILQETCFTNQDKFKVLVKQSASRMTNGIADSGHGFAAARSAA 714 (998)
T ss_pred ecceeccCCCCCccceeEEechhhhcCChhHHHHHHHHHhcccCcccHHHHHHHHHHHHHHhhccCCcccchhHhhhhhc
Confidence 44 332 14667788899999999999999999999989999999999999998888766665554443333
Q ss_pred hcCCCCc-CCCC----C---hh--------hhhcCChhHHHHHHhhhhCCCCCcEEEEEecC-CccchHHHHHHhhccCC
Q 001831 671 NYGNSYF-FRPI----R---IS--------DLQKVDPLKACDYFNSCFKDPSTFTVVIVGNI-DPSNGIPLILQYLGGIP 733 (1008)
Q Consensus 671 ~~~~~~~-~~~~----~---~~--------~i~~lt~~~l~~~~~~~~~~~~~~~l~i~Gd~-~~~~~~~~i~~~~~~l~ 733 (1008)
++...-+ .... . .. +++.| .+.|.+. ++.+.+.++|.+.|..|= ....+.+.+++++.++|
T Consensus 715 ~l~~ag~i~EqlgGl~ql~fl~~L~~~~d~d~~~i-~~kL~eI-rk~ll~~ng~~~~itAd~~q~~~vEkav~kFl~~lp 792 (998)
T KOG2019|consen 715 MLTPAGWISEQLGGLSQLEFLHRLEEKVDNDWEPI-VSKLTEI-RKSLLNTNGMIVNITADPKQLTNVEKAVEKFLDSLP 792 (998)
T ss_pred ccCcccchHhHhcchHHHHHHHHHHHHhhhhHHHH-HHHHHHH-HHHHhcCCCeEEEEecCcccchhHHHHHHHHHHhcc
Confidence 3321111 0000 0 11 12222 1223333 335667899999998764 56789999999999998
Q ss_pred CCCCCCCccccCCCCCCCcCCCCccceeEEeCCCCCcceEEEEEeec-cCCCCcchHhHHHHHHHHHHH-HHHHHHHHhh
Q 001831 734 KPPEPILHFNRDNLKGLPFTFPSSIIREVVRSPMVEAQCSVQLCFPV-ELKNGTMVEEINYVGFLSKLL-ETKMMQVLRF 811 (1008)
Q Consensus 734 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~L~~~l-~s~L~~~lRe 811 (1008)
...+.. .........|.+.....+..+. -+..++.-+..+ ++.+++... +.||+.++ +..|+.++||
T Consensus 793 ~e~p~g------~~st~d~r~p~~~~~i~~~~P~-fqvnyvgka~~~vpyt~~d~as----l~vlS~~lt~k~Lh~evRe 861 (998)
T KOG2019|consen 793 RENPSG------SKSTWDARLPLRSEAIRVVIPT-FQVNYVGKAGLGVPYTHPDGAS----LQVLSKLLTNKWLHDEVRE 861 (998)
T ss_pred ccCCCC------CccCccccCCCCceeEEEeccc-cchhhhhhhcccccCCCCCCcH----HHHHHHHHHHHHHHHHHHH
Confidence 533222 1111222334333222223331 112222222333 566665443 67777766 6789999998
Q ss_pred hcCCeeeeeeeeeccCCCCCCCCCcceeEEEEEEeCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhcc
Q 001831 812 KHGQIYSASVSVFLGGNKHSRTGDVRGDISINFSCDPEISFKLVDLALDEISRLQKEGPSDEDVSTILELEQRAHETGLQ 891 (1008)
Q Consensus 812 ~~gl~Y~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~~l~~i~~~~is~~el~~ak~~~~~~~~~~~~ 891 (1008)
+ |++|+.++++.. ..|.|+++.+.+|+-+ +.++.+...-+.++...++++++++||...+...+.++.
T Consensus 862 k-GGAYGgg~s~~s----------h~GvfSf~SYRDpn~l-ktL~~f~~tgd~~~~~~~~~~dldeAkl~~f~~VDap~~ 929 (998)
T KOG2019|consen 862 K-GGAYGGGCSYSS----------HSGVFSFYSYRDPNPL-KTLDIFDGTGDFLRGLDVDQQDLDEAKLGTFGDVDAPQL 929 (998)
T ss_pred h-cCccCCcccccc----------ccceEEEEeccCCchh-hHHHhhcchhhhhhcCCccccchhhhhhhhcccccCCcC
Confidence 6 999999888663 6899999999999755 569999999999998899999999999999998877664
Q ss_pred chHHHHHHHHHhhccccccCCCCcchhhchhhHHHHHhcCCHHHHHHHHHHhcCCCCCCceEEEEEecCch
Q 001831 892 ENYHWLDRILCSYQSRVYSGDVGTSFKIQDEARSKVRKSLQPLTLQLALQRIMPYPCNKQFTVVILMPQVS 962 (1008)
Q Consensus 892 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vT~edi~~~a~~~l~~~~~~~~~~~i~~p~~~ 962 (1008)
.....+.+..... -+. . .+..++.|-+++..|+.++|.+|+.. .+....+++.||+..
T Consensus 930 P~~kG~~~fl~gv--------tDe-m---kQarREqll~vSl~d~~~vae~yl~~-~~~~~~vav~g~E~~ 987 (998)
T KOG2019|consen 930 PDAKGLLRFLLGV--------TDE-M---KQARREQLLAVSLKDFKAVAEAYLGV-GDKGVAVAVAGPEDI 987 (998)
T ss_pred CcccchHHHHhcC--------CHH-H---HHHHHHHHHhhhHHHHHHHHHHHhcc-CCcceEEEeeCccCc
Confidence 3333222222111 111 1 26678889999999999999999975 112334555667663
No 7
>KOG0960 consensus Mitochondrial processing peptidase, beta subunit, and related enzymes (insulinase superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.7e-53 Score=420.32 Aligned_cols=406 Identities=19% Similarity=0.251 Sum_probs=348.1
Q ss_pred CcEEEEcCCCcEEEEeecCCCCceEEEEEEEcccCCCCCCCCCChhHHHHHHccCCCCCCChhhHHHHHHHcccccCCCc
Q 001831 37 GVDYGRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDIIKFLESIGAEFGACQ 116 (1008)
Q Consensus 37 ~i~~~~L~NGl~v~~~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ahllehl~f~gs~~~~~~~~~~~l~~~g~~~g~~~ 116 (1008)
..+..+|+||++|..-.+.. .++++++||++||+.|++...|.|||+|||+|+||++.+...++..+|.+|+.+
T Consensus 33 ~t~vttL~NGlrVaTE~~~a--~TATVGVwidaGSR~EnekNNG~ahFLEhlaFKGT~~Rs~~alElEieniGahL---- 106 (467)
T KOG0960|consen 33 ETEVTTLPNGLRVATEHNSA--STATVGVWIDAGSRFENEKNNGTAHFLEHLAFKGTKNRSQAALELEIENIGAHL---- 106 (467)
T ss_pred cceEEEcCCCcEEEeccCCC--cceEEEEEeccCccccccccccHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHh----
Confidence 37999999999998887733 369999999999999999999999999999999999999999999999998765
Q ss_pred cccccCCeEEEEEECCCCCHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhcCCCc-hhhhHHHHHHHHhcCCCC
Q 001831 117 NAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEKERGAVLEEYRGNRNA-SGRMQDAHWVLMMEGSKY 195 (1008)
Q Consensus 117 na~T~~d~t~y~~~~~~~~~~~l~~~l~~l~d~~~~p~~~~~~~~~er~~v~~e~~~~~~~-~~~~~~~~~~~~~~~~p~ 195 (1008)
||||++|+|+|++.+.+++ +++++++|+|++.+..+.+.++++||++|+.|++..+.. +..+.+.++...|.|+|+
T Consensus 107 NAytSReqT~yyakal~~d---v~kavdiLaDIlqns~L~~s~IerER~vILrEmqevd~~~~eVVfdhLHatafQgtPL 183 (467)
T KOG0960|consen 107 NAYTSREQTVYYAKALSKD---VPKAVDILADILQNSKLEESAIERERDVILREMQEVDKNHQEVVFDHLHATAFQGTPL 183 (467)
T ss_pred cccccccceeeehhhcccc---chHHHHHHHHHHHhCccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhcCCcc
Confidence 9999999999999998766 999999999999999999999999999999999988654 667899999999999999
Q ss_pred CccCCCCCHHHhcCCCHHHHHHHHHhcccCCCcEEEEEccCCCHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCce
Q 001831 196 AECLPIGLEKVIRTVSSDTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPPVIPKFPVPSHQEPRF 275 (1008)
Q Consensus 196 ~~~~~~g~~~~i~~it~~~l~~f~~~~y~p~n~~l~i~Gdi~d~~~~~~~i~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (1008)
+ +...|+.++|++|+.+||++|-+.||.+++|+|+.+|.| +++++.++++++||.++....+...+..+++ ......
T Consensus 184 ~-~tilGp~enI~si~r~DL~~yi~thY~~~RmVlaaaGgV-~He~lv~la~k~fg~~~~~~~~~~~~~~~~~-~FtgsE 260 (467)
T KOG0960|consen 184 G-RTILGPSENIKSISRADLKDYINTHYKASRMVLAAAGGV-KHEELVKLAEKYFGDLSKLQTGDKVPLVPPA-RFTGSE 260 (467)
T ss_pred c-ccccChhhhhhhhhHHHHHHHHHhcccCccEEEEecCCc-CHHHHHHHHHHHcCCCcccccCcCCCCCCCc-cccCce
Confidence 9 999999999999999999999999999999999999999 9999999999999998764444433333332 222333
Q ss_pred EEEecCCCCceEEEEEEEcCCCcCCCHHHHHHHHHHHHHHH---------HHHHHHHHHhccCCCCeeeeeeccCccccc
Q 001831 276 SCFIESEAGGSAVIVSYKMPVNELKTIKDYKEMLTESMFLH---------ALNQRFFKLSRRKDPPYFSCSASADDLVRP 346 (1008)
Q Consensus 276 ~~~~~~~~~~~~v~l~~~~p~~~~~~~~~~~~~~l~~il~~---------~~~srL~~~lr~~~g~~~~~~~~~~~~~~~ 346 (1008)
....++..+.+++.|+..+ .++.+||++++++.++++|. ..+|+|.+.+.+. .+|.+..++...| .+
T Consensus 261 vR~rdd~lP~a~~AiAVEG--~~w~~pD~~~l~van~iiG~wdr~~g~g~~~~s~La~~~~~~-~l~~sfqsFnt~Y-kD 336 (467)
T KOG0960|consen 261 VRVRDDDLPLAHIAIAVEG--VSWAHPDYFALMVANTIIGNWDRTEGGGRNLSSRLAQKIQQD-QLCHSFQSFNTSY-KD 336 (467)
T ss_pred eeecCCCCchhheeeeEec--CCcCCccHHHHHHHHHHhhhhhcccCCccCCccHHHHHHHHH-HHHHHHhhhhccc-cc
Confidence 4556777888888887765 55789999999999999995 3468998888765 5566666665544 99
Q ss_pred ccEEEEEEEe-cCCcHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhccCCcHHHHHHHHHHhhc-CCC
Q 001831 347 LKAYIMSSSC-KERGTLKALESMLIEVARVRLHGFSEREVSVARALLMSEVESAYLERDQMQSTNLRDECLQHFLC-KEP 424 (1008)
Q Consensus 347 ~~~~~i~~~~-~~~~~~~~~~~i~~~l~~l~~~g~s~~el~~ak~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 424 (1008)
+|+|++++.+ ++..++..+..++++|.+|+. -+|+.|++|||++++.++...++.. ...++.+..++++ |..
T Consensus 337 TGLwG~y~V~~~~~~iddl~~~vl~eW~rL~~-~vteaEV~RAKn~Lkt~Lll~ldgt-----tpi~ediGrqlL~~Grr 410 (467)
T KOG0960|consen 337 TGLWGIYFVTDNLTMIDDLIHSVLKEWMRLAT-SVTEAEVERAKNQLKTNLLLSLDGT-----TPIAEDIGRQLLTYGRR 410 (467)
T ss_pred ccceeEEEEecChhhHHHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHhcCC-----CchHHHHHHHHhhcCCc
Confidence 9999999999 778899999999999999988 6999999999999999998887654 3446777766654 666
Q ss_pred ccCHHHHHHHHHHHcCCCCHHHHHHHHHHhcccCCeEEEEeCCCC
Q 001831 425 IIGIEYEARLQKTLLPHISALEVSRYSEKLQTSCSCVIKTIEPQT 469 (1008)
Q Consensus 425 ~~~~~~~~~~~~~~i~~it~edv~~~~~~~l~~~~~~~~~~~p~~ 469 (1008)
.+..+.+ .+|++||.++|++++.+|+.+....++.+||-.
T Consensus 411 i~l~El~-----~rId~vt~~~Vr~va~k~iyd~~iAia~vG~ie 450 (467)
T KOG0960|consen 411 IPLAELE-----ARIDAVTAKDVREVASKYIYDKDIAIAAVGPIE 450 (467)
T ss_pred CChHHHH-----HHHhhccHHHHHHHHHHHhhcCCcceeeecccc
Confidence 5544433 349999999999999999999998888888865
No 8
>COG0612 PqqL Predicted Zn-dependent peptidases [General function prediction only]
Probab=100.00 E-value=2.4e-51 Score=465.75 Aligned_cols=409 Identities=25% Similarity=0.344 Sum_probs=339.7
Q ss_pred cEEEEcCCCcEEEEeecCCCCceEEEEEEEcccCCCCCCCCCChhHHHHHHccCCCCCCChhhHHHHHHHcccccCCCcc
Q 001831 38 VDYGRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDIIKFLESIGAEFGACQN 117 (1008)
Q Consensus 38 i~~~~L~NGl~v~~~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ahllehl~f~gs~~~~~~~~~~~l~~~g~~~g~~~n 117 (1008)
++.++|+||++|++.+++.. ..+++.++|++|+++|++++.|+|||+|||+|+||++++..++.+.+++.|+. .|
T Consensus 17 ~~~~~L~nGl~~~~~~~~~~-~~vs~~~~v~~Gs~~e~~~~~G~AH~lehm~fkgt~~~~~~~i~~~~~~~G~~----~n 91 (438)
T COG0612 17 LQVFTLPNGLRVITYPNPTA-PTVSLDVWVKAGSRAEPAGKAGIAHFLEHMAFKGTTGLPSAELAEAFEKLGGQ----LN 91 (438)
T ss_pred ceEEEcCCCCEEEEEeCCCC-CEEEEEEEEeecccCCCCCcccHHHHHHHHHccCCCCCChHHHHHHHHHhcCe----ee
Confidence 99999999999999998863 37999999999999999999999999999999999999988999999999876 59
Q ss_pred ccccCCeEEEEEECCCCCHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhcCCCch-hhhHHHHHHHHhcCCCCC
Q 001831 118 AVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEKERGAVLEEYRGNRNAS-GRMQDAHWVLMMEGSKYA 196 (1008)
Q Consensus 118 a~T~~d~t~y~~~~~~~~~~~l~~~l~~l~d~~~~p~~~~~~~~~er~~v~~e~~~~~~~~-~~~~~~~~~~~~~~~p~~ 196 (1008)
|+|++|+|+|++++. +++++.+|++++|++.+|.|++++|++||++|++|+++..+++ ..+...+...+|++|||+
T Consensus 92 a~ts~d~t~y~~~~l---~~~~~~~l~llad~l~~p~f~~~~~e~Ek~vil~ei~~~~d~p~~~~~~~l~~~~~~~~p~~ 168 (438)
T COG0612 92 AFTSFDYTVYYLSVL---PDNLDKALDLLADILLNPTFDEEEVEREKGVILEEIRMRQDDPDDLAFERLLEALYGNHPLG 168 (438)
T ss_pred ccccchhhhhhhhhc---hhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHhhccCCCC
Confidence 999999999999954 3459999999999999999999999999999999999997654 456999999999999999
Q ss_pred ccCCCCCHHHhcCCCHHHHHHHHHhcccCCCcEEEEEccCCCHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCceE
Q 001831 197 ECLPIGLEKVIRTVSSDTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPPVIPKFPVPSHQEPRFS 276 (1008)
Q Consensus 197 ~~~~~g~~~~i~~it~~~l~~f~~~~y~p~n~~l~i~Gdi~d~~~~~~~i~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (1008)
++++|++++|.++|.++|++||++||+|+||+|+||||| +++++.++++++|+.|+....+...+. .++... .+..
T Consensus 169 -~~~~G~~e~I~~it~~dl~~f~~k~Y~p~n~~l~vvGdi-~~~~v~~~~~~~f~~~~~~~~~~~~~~-~~~~~~-~~~~ 244 (438)
T COG0612 169 -RPILGTEESIEAITREDLKDFYQKWYQPDNMVLVVVGDV-DAEEVVELIEKYFGDLPGAAPPPKIPP-EPPLGP-ERVV 244 (438)
T ss_pred -CCCCCCHHHHHhCCHHHHHHHHHHhcCcCceEEEEecCC-CHHHHHHHHHHHHccCCccCCCCCCCC-ccccCC-CceE
Confidence 999999999999999999999999999999999999999 999999999999999987222222111 112222 2222
Q ss_pred EEe---cCCCCceEEEEEEEcCCCcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeeeeeeccCcccccccEEEEE
Q 001831 277 CFI---ESEAGGSAVIVSYKMPVNELKTIKDYKEMLTESMFLHALNQRFFKLSRRKDPPYFSCSASADDLVRPLKAYIMS 353 (1008)
Q Consensus 277 ~~~---~~~~~~~~v~l~~~~p~~~~~~~~~~~~~~l~~il~~~~~srL~~~lr~~~g~~~~~~~~~~~~~~~~~~~~i~ 353 (1008)
... .+...++++.++++.+... ...+++++.+++.++|++.+|||++.+|+++|++|+++++.... .+.+.+.++
T Consensus 245 ~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~l~~~llgg~~~SrLf~~~re~~glay~~~~~~~~~-~~~~~~~~~ 322 (438)
T COG0612 245 RVNDPEQPDLEQAWLALGYPGPDYD-SPDDYAALLLLNGLLGGGFSSRLFQELREKRGLAYSVSSFSDFL-SDSGLFSIY 322 (438)
T ss_pred EecCCCCchhhhhhhhccccCcCcC-cchhhHHHHHHHHHhCCCcchHHHHHHHHhcCceeeeccccccc-cccCCceEE
Confidence 222 2345577777777766543 12367888899999999999999999999999999999866644 788899999
Q ss_pred EEecCCcHHHHHHHHHHHHHHHHhCC---CCHHHHHHHHHHHHHHHHHHHHhhccCCcHHHHHHHHHHhhcCCCccCHHH
Q 001831 354 SSCKERGTLKALESMLIEVARVRLHG---FSEREVSVARALLMSEVESAYLERDQMQSTNLRDECLQHFLCKEPIIGIEY 430 (1008)
Q Consensus 354 ~~~~~~~~~~~~~~i~~~l~~l~~~g---~s~~el~~ak~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (1008)
+.+.+.+.+...+.+.+++..+.+.+ +++++++++|..+...+....+++ ...++.+......+........
T Consensus 323 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~t~~~~~~~k~~~~~~~~~~~~s~-----~~~~~~~~~~~~~~~~~~~~~~ 397 (438)
T COG0612 323 AGTAPENPEKTAELVEEILKALKKGLKGPFTEEELDAAKQLLIGLLLLSLDSP-----SSIAELLGQYLLLGGSLITLEE 397 (438)
T ss_pred EEecCCChhhHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHhhhccCCH-----HHHHHHHHHHHHhcCCccCHHH
Confidence 99887777777777777777766654 999999999999888776654333 5666666666666555444443
Q ss_pred HHHHHHHHcCCCCHHHHHHHHHHhcccCCeEEEEeCCCC
Q 001831 431 EARLQKTLLPHISALEVSRYSEKLQTSCSCVIKTIEPQT 469 (1008)
Q Consensus 431 ~~~~~~~~i~~it~edv~~~~~~~l~~~~~~~~~~~p~~ 469 (1008)
+.+.|+.+|++||++++++++.+++.++++++|..
T Consensus 398 ----~~~~i~~vt~~dv~~~a~~~~~~~~~~~~~~~p~~ 432 (438)
T COG0612 398 ----LLERIEAVTLEDVNAVAKKLLAPENLTIVVLGPEK 432 (438)
T ss_pred ----HHHHHHhcCHHHHHHHHHHhcCCCCcEEEEEcccc
Confidence 34569999999999999999999999999999875
No 9
>TIGR02110 PQQ_syn_pqqF coenzyme PQQ biosynthesis probable peptidase PqqF. In a subset of species that make coenzyme PQQ (pyrrolo-quinoline-quinone), this probable peptidase is found in the PQQ biosynthesis region and is thought to act as a protease on PqqA (TIGR02107), a probable peptide precursor of the coenzyme. PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases.
Probab=100.00 E-value=5.1e-46 Score=424.47 Aligned_cols=334 Identities=16% Similarity=0.151 Sum_probs=280.5
Q ss_pred EEEcCCCcEEEEeecCCCCceEEEEEEEcccCCCCCCCCCChhHHHHHHccCCCCCCChh-hHHHHHHHcccccCCCccc
Q 001831 40 YGRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNH-DIIKFLESIGAEFGACQNA 118 (1008)
Q Consensus 40 ~~~L~NGl~v~~~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ahllehl~f~gs~~~~~~-~~~~~l~~~g~~~g~~~na 118 (1008)
+.+|+|||+|++++++..+ .+++.++|++||++|++++.|+|||+|||+|+||++++.. ++.+.++.+|+. .||
T Consensus 2 ~~tL~NGLrVllv~~p~~p-~vav~l~v~aGS~~Ep~~~~GLAHfLEHMLFkGT~~~~~~~~i~~~le~lGG~----lNA 76 (696)
T TIGR02110 2 RITLPNGLRVHLYHQPDAK-RAAALLRVAAGSHDEPSAWPGLAHFLEHLLFLGGERFQGDDRLMPWVQRQGGQ----VNA 76 (696)
T ss_pred eEEcCCCCEEEEEECCCCC-EEEEEEEEeeccCCCCCCCCcHHHHHHHHHhcCCCCCCcHHHHHHHHHHhCCe----EEE
Confidence 5789999999999988654 6999999999999999999999999999999999999985 799999999866 599
Q ss_pred cccCCeEEEEEECCCCCHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhcCCCc-hhhhHHHHHHHHhcCCCCCc
Q 001831 119 VTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEKERGAVLEEYRGNRNA-SGRMQDAHWVLMMEGSKYAE 197 (1008)
Q Consensus 119 ~T~~d~t~y~~~~~~~~~~~l~~~l~~l~d~~~~p~~~~~~~~~er~~v~~e~~~~~~~-~~~~~~~~~~~~~~~~p~~~ 197 (1008)
+|+.|+|+|++++++ ++++.+|++|+|++.+|.|+++++++||++|.+|++...++ ...+.+.+.+.+|++|||+
T Consensus 77 ~Ts~d~T~y~~~v~~---~~l~~aL~lLaD~l~~P~f~eeeierEr~vvl~Ei~~~~ddp~~~~~~~l~~~l~~~HPy~- 152 (696)
T TIGR02110 77 TTLERTTAFFFELPA---AALAAGLARLCDMLARPLLTAEDQQREREVLEAEYIAWQNDADTLREAALLDALQAGHPLR- 152 (696)
T ss_pred EEcCCeEEEEEEecH---HHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHcCCCCCCC-
Confidence 999999999999995 45999999999999999999999999999999999988655 4556778889999999999
Q ss_pred cCCCCCHHHhcCCC---HHHHHHHHHhcccCCCcEEEEEccCCCHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCc
Q 001831 198 CLPIGLEKVIRTVS---SDTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPPVIPKFPVPSHQEPR 274 (1008)
Q Consensus 198 ~~~~g~~~~i~~it---~~~l~~f~~~~y~p~n~~l~i~Gdi~d~~~~~~~i~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 274 (1008)
++.+|+.++|++++ .++|++||++||+|+||+|+|+||+ ++++++++++++|+.|+....+... .+.+.....+
T Consensus 153 ~~~iGt~esL~~it~~t~edL~~F~~~~Y~p~NmvLvIvGdv-s~eel~~l~e~~f~~~~~~~~~~~~--~~~p~~~~~~ 229 (696)
T TIGR02110 153 RFHAGSRDSLALPNTAFQQALRDFHRRHYQAGNMQLWLQGPQ-SLDELEQLAARFGASLAAGGECAQA--PPAPLLRFDR 229 (696)
T ss_pred CCCCCCHHHHhCcccchHHHHHHHHHHhcchhcEEEEEEeCC-CHHHHHHHHHHHhCCCCCCCCCCCC--CCCCCCCCce
Confidence 89999999999876 9999999999999999999999999 9999999999999999765433211 1112111222
Q ss_pred eEEEecCCCCceEEEEEEEcCCCcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeeeeeeccCcccccccEEEEEE
Q 001831 275 FSCFIESEAGGSAVIVSYKMPVNELKTIKDYKEMLTESMFLHALNQRFFKLSRRKDPPYFSCSASADDLVRPLKAYIMSS 354 (1008)
Q Consensus 275 ~~~~~~~~~~~~~v~l~~~~p~~~~~~~~~~~~~~l~~il~~~~~srL~~~lr~~~g~~~~~~~~~~~~~~~~~~~~i~~ 354 (1008)
.. +..... .++.+.|..|+.+..+++ ++.+++.+|+++.+|+|+..+|+ +|++|+++++......+.+.|.+++
T Consensus 230 ~~-~~~~~~--~q~~l~~~~p~~~~~d~~--al~lL~~iLg~g~sSrL~~~LRe-~GLaysV~s~~~~~~~g~~lf~I~~ 303 (696)
T TIGR02110 230 LT-LAGGSE--PRLWLLFALAGLPATARD--NVTLLCEFLQDEAPGGLLAQLRE-RGLAESVAATWLYQDAGQALLALEF 303 (696)
T ss_pred eE-EEecCc--ceEEEEEeecCCCCCChH--HHHHHHHHhCCCcchHHHHHHHH-CCCEEEEEEeccccCCCCcEEEEEE
Confidence 22 223233 456666766665544444 47899999999999999999996 8999999986532222344899998
Q ss_pred Eec---CCcHHHHHHHHHHHHHHHHhC--CCCHHHHHHHHHH
Q 001831 355 SCK---ERGTLKALESMLIEVARVRLH--GFSEREVSVARAL 391 (1008)
Q Consensus 355 ~~~---~~~~~~~~~~i~~~l~~l~~~--g~s~~el~~ak~~ 391 (1008)
.+. +++.+++++.|+++|++++++ +++.+|++++|+.
T Consensus 304 ~lt~~~~~~~~~v~~~i~~~L~~L~~~~~~~~~eel~rlk~~ 345 (696)
T TIGR02110 304 SARCISAAAAQQIEQLLTQWLGALAEQTWAEQLEHYAQLAQR 345 (696)
T ss_pred EEcCCCccCHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHh
Confidence 873 458899999999999999999 8999999999986
No 10
>KOG2067 consensus Mitochondrial processing peptidase, alpha subunit [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.9e-45 Score=362.00 Aligned_cols=400 Identities=16% Similarity=0.209 Sum_probs=334.1
Q ss_pred CCcEEEEcCCCcEEEEeecCCCCceEEEEEEEcccCCCCCCCCCChhHHHHHHccCCCCCCChhhHHHHHHHcccccCCC
Q 001831 36 FGVDYGRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDIIKFLESIGAEFGAC 115 (1008)
Q Consensus 36 ~~i~~~~L~NGl~v~~~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ahllehl~f~gs~~~~~~~~~~~l~~~g~~~g~~ 115 (1008)
...+..+|+|||+|..-+.++ .-.+++|++++||++|...-.|++||+|.|+|+.|.+|+..++...||.+|. .
T Consensus 23 ~~~kvttL~NGlkvase~~pg--~f~~vGlyIdsGsrYE~~~~~GisH~lerLAF~ST~~~~~~ei~~~LE~~GG----n 96 (472)
T KOG2067|consen 23 SNTKVTTLPNGLKVASENTPG--QFCTVGLYIDSGSRYEAKYFSGISHFLERLAFKSTERFSSKEILAELEKLGG----N 96 (472)
T ss_pred ccceeeecCCccEEeccCCCC--CceEEEEEEecCccccCcCcccHHHHHHHHhhccccCCcHHHHHHHHHHhCC----c
Confidence 358999999999987766544 4589999999999999999999999999999999999999999999998874 4
Q ss_pred ccccccCCeEEEEEECCCCCHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhcCC-CchhhhHHHHHHHHhcCCC
Q 001831 116 QNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEKERGAVLEEYRGNR-NASGRMQDAHWVLMMEGSK 194 (1008)
Q Consensus 116 ~na~T~~d~t~y~~~~~~~~~~~l~~~l~~l~d~~~~p~~~~~~~~~er~~v~~e~~~~~-~~~~~~~~~~~~~~~~~~p 194 (1008)
..+.|++|.++|.+++.++. ++..+.+|+|.+.+|.|++++++.+|..|.-|+..-. .+...+.+.++.++|.+..
T Consensus 97 ~~cqsSRetm~Yaas~~~~~---v~sm~~lLadtV~~P~~~d~ev~~~~~~v~~E~~el~~~Pe~lL~e~iH~Aay~~nt 173 (472)
T KOG2067|consen 97 CDCQSSRETMMYAASADSDG---VDSMVELLADTVLNPKFTDQEVEEARRAVKYEIEELWMRPEPLLTEMIHSAAYSGNT 173 (472)
T ss_pred ccccccHhhhHHHHHhhhcc---cHHHHHHHHHHHhcccccHHHHHHHHHhhhheccccccCchhhHHHHHHHHHhccCc
Confidence 58899999999999998766 9999999999999999999999999999999998774 4555679999999999988
Q ss_pred CCccCCCCCHHHhcCCCHHHHHHHHHhcccCCCcEEEEEccCCCHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCc
Q 001831 195 YAECLPIGLEKVIRTVSSDTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPPVIPKFPVPSHQEPR 274 (1008)
Q Consensus 195 ~~~~~~~g~~~~i~~it~~~l~~f~~~~y~p~n~~l~i~Gdi~d~~~~~~~i~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 274 (1008)
.+ .+.+++.+.|.+|+.+.|.+|.+++|+|++|++..|| | +++++.+.++++|+.+|+...|+.... +....-.
T Consensus 174 lg-~pl~cp~~~i~~I~~~~l~~yl~~~ytp~rmVlA~vG-V-~heelv~~~~~~~~~~~s~~~p~i~~~---~aQYtGG 247 (472)
T KOG2067|consen 174 LG-LPLLCPEENIDKINREVLEEYLKYFYTPERMVLAGVG-V-EHEELVEIAEKLLGDLPSTKVPPIDES---KAQYTGG 247 (472)
T ss_pred cc-ccccCChhhhhhhhHHHHHHHHHhcCChhheEeeecC-C-CHHHHHHHHHHHhccCCccCCCCcccc---hhhcccc
Confidence 98 8889999999999999999999999999999999999 8 999999999999999988644432111 1011000
Q ss_pred eEEE------ecCCCCceEEEEEEEcCCCcCCCHHHHHHHHHHHHHHH-----------HHHHHHHHHhccCCCCeeeee
Q 001831 275 FSCF------IESEAGGSAVIVSYKMPVNELKTIKDYKEMLTESMFLH-----------ALNQRFFKLSRRKDPPYFSCS 337 (1008)
Q Consensus 275 ~~~~------~~~~~~~~~v~l~~~~p~~~~~~~~~~~~~~l~~il~~-----------~~~srL~~~lr~~~g~~~~~~ 337 (1008)
...+ ......-++|.++|..+ +++++|.+++.+|+.++|| ++.||||..+..+..|.|+|.
T Consensus 248 ~~~~~~d~~~~~~g~EltHv~lg~Eg~--~~~deD~v~~avLq~lmGGGGSFSAGGPGKGMySrLY~~vLNry~wv~sct 325 (472)
T KOG2067|consen 248 ELKIDTDAPQVTGGPELTHVVLGFEGC--SWNDEDFVALAVLQMLMGGGGSFSAGGPGKGMYSRLYLNVLNRYHWVYSCT 325 (472)
T ss_pred ccccCCCCccccCccceeeeeEeeccC--CCCChhHHHHHHHHHHhcCCcccCCCCCCcchHHHHHHHHHhhhHHHHHhh
Confidence 0000 01112567888988765 4678999999999999996 678999999998899999999
Q ss_pred eccCcccccccEEEEEEEecCCcHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhccCCcHHHHHHHHH
Q 001831 338 ASADDLVRPLKAYIMSSSCKERGTLKALESMLIEVARVRLHGFSEREVSVARALLMSEVESAYLERDQMQSTNLRDECLQ 417 (1008)
Q Consensus 338 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~l~~l~~~g~s~~el~~ak~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (1008)
++...+ .++|+|+|++.+.|+...+++..+.+++-.+.. |++++|++|||+++++.+..+++++. -..+.+..
T Consensus 326 Afnhsy-~DtGlfgi~~s~~P~~a~~aveli~~e~~~~~~-~v~~~el~RAK~qlkS~LlMNLESR~-----V~~EDvGR 398 (472)
T KOG2067|consen 326 AFNHSY-SDTGLFGIYASAPPQAANDAVELIAKEMINMAG-GVTQEELERAKTQLKSMLLMNLESRP-----VAFEDVGR 398 (472)
T ss_pred hhhccc-cCCceeEEeccCCHHHHHHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHHHHhcccccc-----hhHHHHhH
Confidence 999877 999999999999999999999999999999876 69999999999999999988876652 23344554
Q ss_pred Hhh-cCCCccCHHHHHHHHHHHcCCCCHHHHHHHHHHhcccCCeEEEE
Q 001831 418 HFL-CKEPIIGIEYEARLQKTLLPHISALEVSRYSEKLQTSCSCVIKT 464 (1008)
Q Consensus 418 ~~~-~~~~~~~~~~~~~~~~~~i~~it~edv~~~~~~~l~~~~~~~~~ 464 (1008)
+.+ +|.... +.+ ++..|+++|++||.+++++.+..++.+...
T Consensus 399 QVL~~g~rk~-p~e----~~~~Ie~lt~~DI~rva~kvlt~~p~va~~ 441 (472)
T KOG2067|consen 399 QVLTTGERKP-PDE----FIKKIEQLTPSDISRVASKVLTGKPSVAAF 441 (472)
T ss_pred HHHhccCcCC-HHH----HHHHHHhcCHHHHHHHHHHHhcCCceeccC
Confidence 444 354333 232 355699999999999999999987765544
No 11
>KOG0961 consensus Predicted Zn2+-dependent endopeptidase, insulinase superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.6e-41 Score=357.77 Aligned_cols=876 Identities=13% Similarity=0.096 Sum_probs=539.4
Q ss_pred EEEEcCCCcEEEEeecCCCCceEEEEEEEcccCCCCCCCCCChhHHHHHHccCCCCCCChhhHHHHHHHcccccCCCccc
Q 001831 39 DYGRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDIIKFLESIGAEFGACQNA 118 (1008)
Q Consensus 39 ~~~~L~NGl~v~~~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ahllehl~f~gs~~~~~~~~~~~l~~~g~~~g~~~na 118 (1008)
++..=..|++|.....+++. +.=.+.| ..|..+..|+.|-+||+.|+||++||-+.+...+..+. -++.||
T Consensus 22 kyis~~Tkl~va~~~~pts~--vhG~f~v----~TEa~~d~G~PHTLEHL~FMGSKkYP~kGvLd~~anr~---l~dtNA 92 (1022)
T KOG0961|consen 22 KYISKNTKLRVAIGEVPTSM--VHGAFSV----VTEADSDDGLPHTLEHLVFMGSKKYPFKGVLDVIANRC---LADTNA 92 (1022)
T ss_pred EEeccccceEEEEeecCCcc--eeeeEEe----eeeecCCCCCchhHHHHhhhccccCCcccHHHHhhcch---hccccc
Confidence 34455678999988877664 3333333 23666779999999999999999999988876665554 246899
Q ss_pred cccCCeEEEEEECCCCCHHHHHHHHHHHHHhccCCCCChHHHHHH----------HHHHHHHHhcCCCchhhh-HHHHHH
Q 001831 119 VTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEKE----------RGAVLEEYRGNRNASGRM-QDAHWV 187 (1008)
Q Consensus 119 ~T~~d~t~y~~~~~~~~~~~l~~~l~~l~d~~~~p~~~~~~~~~e----------r~~v~~e~~~~~~~~~~~-~~~~~~ 187 (1008)
+|+.|+|.|.++..- .+-+-..|-++.|.+..|.++++.+..| +++|+.||+..++..+.+ .....+
T Consensus 93 wTDtD~T~YtLStag--~dGFlklLPvy~dHiL~P~Ltdeaf~TEVyHI~geg~d~GVVySEMq~~es~~~~im~~~~~~ 170 (1022)
T KOG0961|consen 93 WTDTDHTAYTLSTAG--SDGFLKLLPVYIDHILTPMLTDEAFATEVYHITGEGNDAGVVYSEMQDHESEMESIMDRKTKE 170 (1022)
T ss_pred ccccCcceEEeeccc--ccchHHHhHHHHHhhcCcccchhhhhhheeeecCCCCccceeehhhhhhhcccchhhhhhhhe
Confidence 999999999998653 2348999999999999999999999877 699999999887766555 566677
Q ss_pred HHhc-CCCCCccCCCCCHHHhcCCCHHHHHHHHHhcccCCCcEEEEEccCCCHHHHHHHHHHhhcCCCCCC--CCC--CC
Q 001831 188 LMME-GSKYAECLPIGLEKVIRTVSSDTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSAT--DPP--VI 262 (1008)
Q Consensus 188 ~~~~-~~p~~~~~~~g~~~~i~~it~~~l~~f~~~~y~p~n~~l~i~Gdi~d~~~~~~~i~~~f~~~~~~~--~~~--~~ 262 (1008)
..|| +++|. ...+|-+..++.+|.+.+|+||+++|+|+||+++|+|.| +++++.......-..++... .|. +.
T Consensus 171 ~~yP~~sgY~-~eTGG~~knLR~lt~ekIR~yHK~~Y~~sN~cviVcG~v-~~d~lL~~m~~~~neile~~s~vP~~~~r 248 (1022)
T KOG0961|consen 171 VIYPPFSGYA-VETGGRLKNLRELTLEKIRDYHKKFYHLSNMCVIVCGMV-DHDQLLEIMNNVENEILEHMSTVPDHFPR 248 (1022)
T ss_pred eecCCCCCce-eccCCChhhHHHhhHHHHHHHHHHhccccceEEEEecCc-CHHHHHHHHHHHHhhhhhccccCCCCCCC
Confidence 7886 78898 889999999999999999999999999999999999999 99999988776544333211 111 11
Q ss_pred C-CC-CCC-CCCCCceE--EEecCCCCceEEEEEEEcCCCcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCC-eeee
Q 001831 263 P-KF-PVP-SHQEPRFS--CFIESEAGGSAVIVSYKMPVNELKTIKDYKEMLTESMFLHALNQRFFKLSRRKDPP-YFSC 336 (1008)
Q Consensus 263 ~-~~-~~~-~~~~~~~~--~~~~~~~~~~~v~l~~~~p~~~~~~~~~~~~~~l~~il~~~~~srL~~~lr~~~g~-~~~~ 336 (1008)
| .+ ..+ ...++... .+...+..+..|.++|.+++.. +-....+..++..+|....-+++.+.+.+-..+ +.++
T Consensus 249 Pf~~tn~~~~i~e~t~~tVefp~~Des~G~v~~aW~g~s~s-D~~t~~a~~vL~dyls~savapf~~~fVeieDP~assv 327 (1022)
T KOG0961|consen 249 PFSFTNALSDIKESTVHTVEFPTDDESRGAVEVAWFGHSPS-DLETHSALHVLFDYLSNSAVAPFQKDFVEIEDPLASSV 327 (1022)
T ss_pred CcccccCcccCCccceeeeecCCcccccceEEEEEcCCCHH-HhhhHHHHHHHHHHhccccccccccceEEecCccccce
Confidence 1 01 111 11112122 2233456789999999988753 445567888999999987778888877665544 4444
Q ss_pred eeccCcccccccEEEEEEEecCCcHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhccCCcHHHHHHHH
Q 001831 337 SASADDLVRPLKAYIMSSSCKERGTLKALESMLIEVARVRLHGFSEREVSVARALLMSEVESAYLERDQMQSTNLRDECL 416 (1008)
Q Consensus 337 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~l~~l~~~g~s~~el~~ak~~l~~~~~~~~~~~~~~~~~~~~~~~~ 416 (1008)
+.... +.-.+.+-.....+.-+++.+....+++.+.+ ...|+-+.+.....+-+.++...++.. ....++..++
T Consensus 328 ~f~~~-~~vrc~i~L~f~gVP~EKi~~~~~k~l~~l~e--t~~iDm~Rm~~~i~~t~~~yL~nlE~n---~~s~fms~ii 401 (1022)
T KOG0961|consen 328 SFHIA-EGVRCDIRLNFAGVPVEKIDECAPKFLDKLVE--TANIDMERMGYLIDQTILNYLVNLETN---APSDFMSHII 401 (1022)
T ss_pred eeeee-cccceeEEEeecCCcHHHhhhhhHHHHHHHHH--hcccCHHHHHHHHHHHHHHHHHhhhcC---ChHHHHHHHh
Confidence 44433 21233333233344557777766666665543 345765555444444444444444433 3456666777
Q ss_pred HHhhcCCCccC----HHHHHHHHHHHcCCCCHHHHHHHHHHhcccCCeEEEEeCCCCCC-------------------CH
Q 001831 417 QHFLCKEPIIG----IEYEARLQKTLLPHISALEVSRYSEKLQTSCSCVIKTIEPQTFS-------------------TI 473 (1008)
Q Consensus 417 ~~~~~~~~~~~----~~~~~~~~~~~i~~it~edv~~~~~~~l~~~~~~~~~~~p~~~~-------------------~~ 473 (1008)
...++|..-.. .-... .+.+.+.+....|+.++.++||..++.++++..|.... ..
T Consensus 402 ~d~~ygnedg~~l~~~lk~l-~~~~~L~~w~~kdW~~Llnk~Fven~s~tVia~Ps~em~e~i~kE~~~~i~~r~~~lg~ 480 (1022)
T KOG0961|consen 402 GDQLYGNEDGELLKKRLKEL-DFLKKLKSWPAKDWVQLLNKYFVENPSATVIAVPSEEMVEKIAKEEEKRIAARCEKLGK 480 (1022)
T ss_pred hhhhccCcchhHHHHHHHhH-HHHHHHhhccHHHHHHHHHHHhccCCCeEEEecCcHHHHHHHHHHHHHHHHHHHHHhCh
Confidence 77777654221 11111 22356888999999999999999999999999998641 22
Q ss_pred HHHHHHHHHHHhhhccCCCCCCcCCCccccccCCCC--CCceeE--eE----------EecCCCeEEEEecCCcEEEEEe
Q 001831 474 DDLKNIVLKIKNLEEKNISPWDEENIPEEIVSTKPS--PGNIVQ--QF----------EYENLGATELVLSNGMRVCYKC 539 (1008)
Q Consensus 474 ~~~~~~~~~~~~~~~~~i~~~~~~~~p~~l~~~~~~--~~~i~~--~~----------~~~~~~~~~~~L~NGl~v~~~~ 539 (1008)
+.++++.++..+++ ..++.++|..++....+ |..+.. .. ..+....+.-+..........-
T Consensus 481 ~gle~l~k~L~~ak-----~~N~~~~p~~ll~~f~I~~peS~ef~~~~~v~t~~s~~pfdne~~~~~~T~~~~fp~fi~l 555 (1022)
T KOG0961|consen 481 KGLEELGKSLEAAK-----LENTANHPSALLLDFLIVKPESLEFFDRFPVQTLTSNSPFDNELTPQQSTFLAQFPFFINL 555 (1022)
T ss_pred hhHHHHHHHHHHhh-----hcccCCCCHHHHhheeccCchheeeeeccceeeccCCCCCCccccceeecccccCCceeec
Confidence 22333333333322 22334455554432211 111110 00 0011111111111122222222
Q ss_pred cCCCCCeEEEEEEecCcCCCCC--cchhhh---hchh-H-HHhhhcCCCC----CCHHHHHHHHcCceEEEEEEe-----
Q 001831 540 TDFLDDQVLFTGFSYGGLSELP--ESEYLS---CSMG-S-TIAGEIGVFG----YRPSMLMDMLAGKRVEGGTKV----- 603 (1008)
Q Consensus 540 ~~~~~~~v~~~~~~~gg~~~~~--~~~g~~---~~l~-~-~l~~~~g~~~----~~~~~l~~~l~~~g~~~~~~~----- 603 (1008)
++....-|.+..+. ..+..+ ...++. .+++ . .++ .|+-. .+.+++.+.+....++.+..+
T Consensus 556 ~h~ps~Fvel~fl~--dss~i~~sl~pYl~~f~~l~~~~pa~l--dgtiptp~~~s~~~v~~~~~s~~id~si~~g~~G~ 631 (1022)
T KOG0961|consen 556 HHCPSKFVELFFLL--DSSNISISLRPYLFLFTDLLFESPAML--DGTIPTPVLTSADDVAKHFTSDLIDHSIQVGVSGL 631 (1022)
T ss_pred ccCchHHHhHhhhh--ccccCchhhhhHHHHHHHHHhcCHHHh--cCCCCcchhhhHHHHHHHHHhhhhhhhhccccccc
Confidence 22211112222222 122222 222322 1111 1 112 34333 244556655555444433333
Q ss_pred cceeEEEEEecChhhHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHHhcCCCCcCCCC--
Q 001831 604 GAYMRTFSGDCSPSDLETALQLVYQLFTTNVAPGEEEVEIVMQMAEEVIRAQERDPYTAFANRVKEINYGNSYFFRPI-- 681 (1008)
Q Consensus 604 ~~~~~~~~~~~~~~~l~~~l~ll~~~l~~p~~~~~~~~~~~k~~~~~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-- 681 (1008)
-.+.+.+.+.|.+++.+....|+.-++....| |++++-+..++.+.++..+..+...++...+...+|+........
T Consensus 632 ~~~lvn~~Ikv~a~~Y~~~v~Wi~~~l~~~Vf-D~~Ri~~~~~~~l~~i~~~KRdg~~vlss~~~~~lY~~~slk~s~d~ 710 (1022)
T KOG0961|consen 632 YDRLVNLRIKVGADKYPLLVKWIQIFLQGVVF-DPSRIHQCAQKLLGEIRDRKRDGCTVLSSAVASMLYGKNSLKISFDE 710 (1022)
T ss_pred chhheeEEEEEccCCcchhHHHHHHHhhhhcc-CHHHHHHHHHHHHhhhhhhhcCccEehHHHHHHHHhcccchhhcccH
Confidence 34577899999999999999999999999888 999999999999999999999988888888999999877654332
Q ss_pred --ChhhhhcC-------------ChhHHHHHHhhhhCCCCCcEEEEEecCC-ccchHHHHHHhhccCCCCCCCCCccccC
Q 001831 682 --RISDLQKV-------------DPLKACDYFNSCFKDPSTFTVVIVGNID-PSNGIPLILQYLGGIPKPPEPILHFNRD 745 (1008)
Q Consensus 682 --~~~~i~~l-------------t~~~l~~~~~~~~~~~~~~~l~i~Gd~~-~~~~~~~i~~~~~~l~~~~~~~~~~~~~ 745 (1008)
.++-++.| ..++++. |. .+ .+.+.+.|+||++ .++...-+....++...+++.. .++..
T Consensus 711 L~~Ek~l~ei~~~v~n~~~~Il~~~e~mR~-y~-l~--~n~~~ihvvgDI~kid~~~~~Wn~l~~~~~~~nP~~-~f~~t 785 (1022)
T KOG0961|consen 711 LVLEKLLEEISKDVMNNPEAILEKLEQMRS-YA-LF--SNGVNIHVVGDIDKIDPKMLSWNWLQADPRFGNPGH-QFSAT 785 (1022)
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHH-HH-Hh--hcceEEEEEeehhcCCccccCchhhhcCcccCCchh-hcccc
Confidence 12222222 1233344 22 23 4788999999996 4666665666665544432211 11110
Q ss_pred CCCCC--CcCCCCccceeEEeCCCCCcceEEEEEeec--cCCCCcchHhHHHHHHHHHHHHHHHHHHHhhhcCCeeeeee
Q 001831 746 NLKGL--PFTFPSSIIREVVRSPMVEAQCSVQLCFPV--ELKNGTMVEEINYVGFLSKLLETKMMQVLRFKHGQIYSASV 821 (1008)
Q Consensus 746 ~~~~~--~~~~p~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~~~~~~~~~~L~~~l~s~L~~~lRe~~gl~Y~~~~ 821 (1008)
..... +..+.++....++-.+. ...+.+....|+ .+.+|.++...++.++|+. +.+++|+.+| ..|++||.++
T Consensus 786 f~~~~~~s~e~gsssk~~~I~~p~-sESs~l~~sip~~~~w~dpel~~~~l~~~YL~~-~eGPfW~~IR-G~GLAYGanm 862 (1022)
T KOG0961|consen 786 FEAGENVSLELGSSSKELLIGVPG-SESSFLYQSIPLDANWNDPELIPAMLFGQYLSQ-CEGPFWRAIR-GDGLAYGANM 862 (1022)
T ss_pred cccCcccceeccCCcceeEecCCC-ccccceeeecccccccCCcchhHHHHHHHHHHh-cccchhhhhc-ccchhcccee
Confidence 00011 11122222222222222 234444445555 3445655543444445544 3889999999 5699999998
Q ss_pred eeeccCCCCCCCCCcceeEEEEEEeCcccHHHHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHHHHhhccch--HHHH
Q 001831 822 SVFLGGNKHSRTGDVRGDISINFSCDPEISFKLVDLALDEISRLQK--EGPSDEDVSTILELEQRAHETGLQEN--YHWL 897 (1008)
Q Consensus 822 ~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~~l~~i~~--~~is~~el~~ak~~~~~~~~~~~~~~--~~~~ 897 (1008)
.... +.+.++..+++.++ +-++.+.-+++++.+.. ..|++.+++-||.+.+..+....... +...
T Consensus 863 ~~~~----------d~~~~~~~iyr~ad-~~kaye~~rdiV~~~vsG~~e~s~~~~egAk~s~~~~~~~~Eng~~~~a~~ 931 (1022)
T KOG0961|consen 863 FVKP----------DRKQITLSIYRCAD-PAKAYERTRDIVRKIVSGSGEISKAEFEGAKRSTVFEMMKRENGTVSGAAK 931 (1022)
T ss_pred EEec----------cCCEEEEEeecCCc-HHHHHHHHHHHHHHHhcCceeecHHHhccchHHHHHHHHHHhccceechHH
Confidence 8875 34556666665553 45778888888888875 46999999999998887665532110 1111
Q ss_pred HHHHHhhccccccCCCCcchhhchhhHHHHHhcCCHHHHHHHHHHhcCCCCCCceEEEEEecCchhhHHHHhhhcc
Q 001831 898 DRILCSYQSRVYSGDVGTSFKIQDEARSKVRKSLQPLTLQLALQRIMPYPCNKQFTVVILMPQVSRFKFLRSLFRH 973 (1008)
Q Consensus 898 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vT~edi~~~a~~~l~~~~~~~~~~~i~~p~~~~~~~l~~~~~~ 973 (1008)
..+..... + ...+++ ..+.++|.+||.+++.+..+.|+.+.|.++-.+..+.--....++.++.|+.
T Consensus 932 ~~~l~~~~-q-~~~~fn-------~~~leri~nvT~~~~~~~~~~y~~~~Fds~~~va~i~~hpaKle~~~e~F~e 998 (1022)
T KOG0961|consen 932 ISILNNFR-Q-TPHPFN-------IDLLERIWNVTSEEMVKIGGPYLARLFDSKCFVASIAVHPAKLEEMKEAFPE 998 (1022)
T ss_pred HHHHHHHH-h-cCCccc-------HHHHHHHHHhhHHHHHHhcccceehhhcccCceEEEeccHHHHHHHHHHhhc
Confidence 11111111 1 122333 5678999999999999999999987776666655555444445555555553
No 12
>COG0612 PqqL Predicted Zn-dependent peptidases [General function prediction only]
Probab=100.00 E-value=3.6e-43 Score=398.85 Aligned_cols=409 Identities=20% Similarity=0.221 Sum_probs=341.8
Q ss_pred CeEEEEecCCcEEEEEecCCCCCeEEEEEEec-CcCCCCCcchhhhhchhHHHhhhcCCCCCCHHHHHHHHcCceEEEEE
Q 001831 523 GATELVLSNGMRVCYKCTDFLDDQVLFTGFSY-GGLSELPESEYLSCSMGSTIAGEIGVFGYRPSMLMDMLAGKRVEGGT 601 (1008)
Q Consensus 523 ~~~~~~L~NGl~v~~~~~~~~~~~v~~~~~~~-gg~~~~~~~~g~~~~l~~~l~~~~g~~~~~~~~l~~~l~~~g~~~~~ 601 (1008)
+++.++|+||++++..+++..+ .+.+.+++. |+..+.+.+.|++|+++||+| .|+.+++..++.+.++..|+.+|+
T Consensus 16 ~~~~~~L~nGl~~~~~~~~~~~-~vs~~~~v~~Gs~~e~~~~~G~AH~lehm~f--kgt~~~~~~~i~~~~~~~G~~~na 92 (438)
T COG0612 16 GLQVFTLPNGLRVITYPNPTAP-TVSLDVWVKAGSRAEPAGKAGIAHFLEHMAF--KGTTGLPSAELAEAFEKLGGQLNA 92 (438)
T ss_pred cceEEEcCCCCEEEEEeCCCCC-EEEEEEEEeecccCCCCCcccHHHHHHHHHc--cCCCCCChHHHHHHHHHhcCeeec
Confidence 4788999999999999998744 488888665 777777789999999999999 599999888999999999999999
Q ss_pred EecceeEEEEEecChhhHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHHhcCCCCcCCCC
Q 001831 602 KVGAYMRTFSGDCSPSDLETALQLVYQLFTTNVAPGEEEVEIVMQMAEEVIRAQERDPYTAFANRVKEINYGNSYFFRPI 681 (1008)
Q Consensus 602 ~~~~~~~~~~~~~~~~~l~~~l~ll~~~l~~p~~~~~~~~~~~k~~~~~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 681 (1008)
+|+.+++.|++++++++++.+|+++++++.+|.| ++++|+++|.++++|+++..++|...+...+...+|++||+++++
T Consensus 93 ~ts~d~t~y~~~~l~~~~~~~l~llad~l~~p~f-~~~~~e~Ek~vil~ei~~~~d~p~~~~~~~l~~~~~~~~p~~~~~ 171 (438)
T COG0612 93 FTSFDYTVYYLSVLPDNLDKALDLLADILLNPTF-DEEEVEREKGVILEEIRMRQDDPDDLAFERLLEALYGNHPLGRPI 171 (438)
T ss_pred cccchhhhhhhhhchhhhHHHHHHHHHHHhCCCC-CHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHhhccCCCCCCC
Confidence 9999999999999999999999999999999999 899999999999999999999999999999999999999999988
Q ss_pred --ChhhhhcCChhHHHHHHhhhhCCCCCcEEEEEecCCccchHHHHHHhhccCCCCCCCCCccccCCCCCCCcCCCCccc
Q 001831 682 --RISDLQKVDPLKACDYFNSCFKDPSTFTVVIVGNIDPSNGIPLILQYLGGIPKPPEPILHFNRDNLKGLPFTFPSSII 759 (1008)
Q Consensus 682 --~~~~i~~lt~~~l~~~~~~~~~~~~~~~l~i~Gd~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~p~~~~ 759 (1008)
+.++|+++|.++|++||++ ||+|+||+++|+||++++++.++++++|++|+....+. ..+..+...+ .
T Consensus 172 ~G~~e~I~~it~~dl~~f~~k-~Y~p~n~~l~vvGdi~~~~v~~~~~~~f~~~~~~~~~~------~~~~~~~~~~---~ 241 (438)
T COG0612 172 LGTEESIEAITREDLKDFYQK-WYQPDNMVLVVVGDVDAEEVVELIEKYFGDLPGAAPPP------KIPPEPPLGP---E 241 (438)
T ss_pred CCCHHHHHhCCHHHHHHHHHH-hcCcCceEEEEecCCCHHHHHHHHHHHHccCCccCCCC------CCCCccccCC---C
Confidence 8999999999999999996 99999999999999999999999999999999722211 1111111111 1
Q ss_pred eeEEeC---CCCCcceEEEEEeecc-CCCC-cchHhHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeeeeeccCCCCCCCC
Q 001831 760 REVVRS---PMVEAQCSVQLCFPVE-LKNG-TMVEEINYVGFLSKLLETKMMQVLRFKHGQIYSASVSVFLGGNKHSRTG 834 (1008)
Q Consensus 760 ~~~~~~---~~~~~~~~v~~~~~~~-~~~~-~~~~~~~~~~~L~~~l~s~L~~~lRe~~gl~Y~~~~~~~~~~~~~~~~~ 834 (1008)
...... .....++++.++++++ ..++ ++....+.+.++|+++.||||..+|++.|++|++++......
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~llgg~~~SrLf~~~re~~glay~~~~~~~~~~------- 314 (438)
T COG0612 242 RVVRVNDPEQPDLEQAWLALGYPGPDYDSPDDYAALLLLNGLLGGGFSSRLFQELREKRGLAYSVSSFSDFLS------- 314 (438)
T ss_pred ceEEecCCCCchhhhhhhhccccCcCcCcchhhHHHHHHHHHhCCCcchHHHHHHHHhcCceeeecccccccc-------
Confidence 112211 2234577777778874 3333 455656666778888899999999999999999987555432
Q ss_pred CcceeEEEEEEeCcccHHHHHHHHHHHHHHHHhCC---CCHHHHHHHHHHHHHHHHhhccchHHHHHHHHHhhccccccC
Q 001831 835 DVRGDISINFSCDPEISFKLVDLALDEISRLQKEG---PSDEDVSTILELEQRAHETGLQENYHWLDRILCSYQSRVYSG 911 (1008)
Q Consensus 835 ~~~g~~~i~~~~~~~~~~~~~~~~~~~l~~i~~~~---is~~el~~ak~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 911 (1008)
..|.+.+++.+++.+.+++.+.+.+++..+++.. +++++++.+|..+.+.+....+++...++.+..+.. ..+
T Consensus 315 -~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~t~~~~~~~k~~~~~~~~~~~~s~~~~~~~~~~~~~---~~~ 390 (438)
T COG0612 315 -DSGLFSIYAGTAPENPEKTAELVEEILKALKKGLKGPFTEEELDAAKQLLIGLLLLSLDSPSSIAELLGQYLL---LGG 390 (438)
T ss_pred -ccCCceEEEEecCCChhhHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHhhhccCCHHHHHHHHHHHHH---hcC
Confidence 5788999999998888888999999998887764 999999999999999998888888877776666553 223
Q ss_pred CCCcchhhchhhHHHHHhcCCHHHHHHHHHHhcCCCCCCceEEEEEecCchhh
Q 001831 912 DVGTSFKIQDEARSKVRKSLQPLTLQLALQRIMPYPCNKQFTVVILMPQVSRF 964 (1008)
Q Consensus 912 ~~~~~~~~~~~~~~~~i~~vT~edi~~~a~~~l~~~~~~~~~~~i~~p~~~~~ 964 (1008)
..... +++.+.|++||++||+++|++++.+ ++.++++++|.+...
T Consensus 391 ~~~~~-----~~~~~~i~~vt~~dv~~~a~~~~~~---~~~~~~~~~p~~~~~ 435 (438)
T COG0612 391 SLITL-----EELLERIEAVTLEDVNAVAKKLLAP---ENLTIVVLGPEKALK 435 (438)
T ss_pred CccCH-----HHHHHHHHhcCHHHHHHHHHHhcCC---CCcEEEEEccccccc
Confidence 44443 7889999999999999999999998 889999999987543
No 13
>KOG0960 consensus Mitochondrial processing peptidase, beta subunit, and related enzymes (insulinase superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.7e-41 Score=334.30 Aligned_cols=407 Identities=11% Similarity=0.056 Sum_probs=343.3
Q ss_pred CeEEEEecCCcEEEEEecCCCCCeEEEEEEe-cCcCCCCCcchhhhhchhHHHhhhcCCCCCCHHHHHHHHcCceEEEEE
Q 001831 523 GATELVLSNGMRVCYKCTDFLDDQVLFTGFS-YGGLSELPESEYLSCSMGSTIAGEIGVFGYRPSMLMDMLAGKRVEGGT 601 (1008)
Q Consensus 523 ~~~~~~L~NGl~v~~~~~~~~~~~v~~~~~~-~gg~~~~~~~~g~~~~l~~~l~~~~g~~~~~~~~l~~~l~~~g~~~~~ 601 (1008)
+.+..+|+||++|....+ .... ..+.+++ .|++.+.+.+.|.+|+++||.| -|+++.+...++.+++..|..+|+
T Consensus 33 ~t~vttL~NGlrVaTE~~-~a~T-ATVGVwidaGSR~EnekNNG~ahFLEhlaF--KGT~~Rs~~alElEieniGahLNA 108 (467)
T KOG0960|consen 33 ETEVTTLPNGLRVATEHN-SAST-ATVGVWIDAGSRFENEKNNGTAHFLEHLAF--KGTKNRSQAALELEIENIGAHLNA 108 (467)
T ss_pred cceEEEcCCCcEEEeccC-CCcc-eEEEEEeccCccccccccccHHHHHHHHHh--cCCCcchhHHHHHHHHHHHHHhcc
Confidence 457779999999999877 4443 5555544 5778888889999999999999 599999999999999999999999
Q ss_pred EecceeEEEEEecChhhHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHHhcCCCCcCCCC
Q 001831 602 KVGAYMRTFSGDCSPSDLETALQLVYQLFTTNVAPGEEEVEIVMQMAEEVIRAQERDPYTAFANRVKEINYGNSYFFRPI 681 (1008)
Q Consensus 602 ~~~~~~~~~~~~~~~~~l~~~l~ll~~~l~~p~~~~~~~~~~~k~~~~~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 681 (1008)
+|+++.+.|+.+++++++++++++|++++.+..+ ++.+++++|.+++.|++....+.....++.++...|+++|+++.+
T Consensus 109 ytSReqT~yyakal~~dv~kavdiLaDIlqns~L-~~s~IerER~vILrEmqevd~~~~eVVfdhLHatafQgtPL~~ti 187 (467)
T KOG0960|consen 109 YTSREQTVYYAKALSKDVPKAVDILADILQNSKL-EESAIERERDVILREMQEVDKNHQEVVFDHLHATAFQGTPLGRTI 187 (467)
T ss_pred cccccceeeehhhccccchHHHHHHHHHHHhCcc-chhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhcCCcccccc
Confidence 9999999999999999999999999999999887 899999999999999999999999999999999999999999998
Q ss_pred --ChhhhhcCChhHHHHHHhhhhCCCCCcEEEEEecCCccchHHHHHHhhccCCCCCCCCCccccCCCCCCCcCCCCccc
Q 001831 682 --RISDLQKVDPLKACDYFNSCFKDPSTFTVVIVGNIDPSNGIPLILQYLGGIPKPPEPILHFNRDNLKGLPFTFPSSII 759 (1008)
Q Consensus 682 --~~~~i~~lt~~~l~~~~~~~~~~~~~~~l~i~Gd~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~p~~~~ 759 (1008)
+.+.|++|+.+||++|.+. +|.+.+|.+..+|.++++++.+++++|||.++....+. .++. .+.+.-..
T Consensus 188 lGp~enI~si~r~DL~~yi~t-hY~~~RmVlaaaGgV~He~lv~la~k~fg~~~~~~~~~-------~~~~-~~~~~Ftg 258 (467)
T KOG0960|consen 188 LGPSENIKSISRADLKDYINT-HYKASRMVLAAAGGVKHEELVKLAEKYFGDLSKLQTGD-------KVPL-VPPARFTG 258 (467)
T ss_pred cChhhhhhhhhHHHHHHHHHh-cccCccEEEEecCCcCHHHHHHHHHHHcCCCcccccCc-------CCCC-CCCccccC
Confidence 8999999999999999996 66789999999999999999999999999987633222 1111 11222223
Q ss_pred eeEEeCCCCCcceEEEEEeec-cCCCCcchHhHHHHHHHHHH---------HHHHHHHHHhhhcCCeeeeeeeeeccCCC
Q 001831 760 REVVRSPMVEAQCSVQLCFPV-ELKNGTMVEEINYVGFLSKL---------LETKMMQVLRFKHGQIYSASVSVFLGGNK 829 (1008)
Q Consensus 760 ~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~L~~~---------l~s~L~~~lRe~~gl~Y~~~~~~~~~~~~ 829 (1008)
.++...++..|.+++.++..+ ++.+||+....++..++|.. +.++|-+.+-+. .++-+..++.
T Consensus 259 sEvR~rdd~lP~a~~AiAVEG~~w~~pD~~~l~van~iiG~wdr~~g~g~~~~s~La~~~~~~-~l~~sfqsFn------ 331 (467)
T KOG0960|consen 259 SEVRVRDDDLPLAHIAIAVEGVSWAHPDYFALMVANTIIGNWDRTEGGGRNLSSRLAQKIQQD-QLCHSFQSFN------ 331 (467)
T ss_pred ceeeecCCCCchhheeeeEecCCcCCccHHHHHHHHHHhhhhhcccCCccCCccHHHHHHHHH-HHHHHHhhhh------
Confidence 456666677899999999999 78899998888888888875 478898888754 5565554332
Q ss_pred CCCCCCcceeEEEEEEe-CcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccchHHHHHHHHHhhcccc
Q 001831 830 HSRTGDVRGDISINFSC-DPEISFKLVDLALDEISRLQKEGPSDEDVSTILELEQRAHETGLQENYHWLDRILCSYQSRV 908 (1008)
Q Consensus 830 ~~~~~~~~g~~~i~~~~-~~~~~~~~~~~~~~~l~~i~~~~is~~el~~ak~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 908 (1008)
++|. +.|.|++|+.| ++..++.++..+.+++.++.. .+|+.|+++||+.+..++...++.....++.+..+..
T Consensus 332 -t~Yk-DTGLwG~y~V~~~~~~iddl~~~vl~eW~rL~~-~vteaEV~RAKn~Lkt~Lll~ldgttpi~ediGrqlL--- 405 (467)
T KOG0960|consen 332 -TSYK-DTGLWGIYFVTDNLTMIDDLIHSVLKEWMRLAT-SVTEAEVERAKNQLKTNLLLSLDGTTPIAEDIGRQLL--- 405 (467)
T ss_pred -cccc-cccceeEEEEecChhhHHHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHh---
Confidence 2233 69999999999 899999999999999999987 6999999999999999999888777666776666553
Q ss_pred ccCCCCcchhhchhhHHHHHhcCCHHHHHHHHHHhcCCCCCCceEEEEEecCchhh
Q 001831 909 YSGDVGTSFKIQDEARSKVRKSLQPLTLQLALQRIMPYPCNKQFTVVILMPQVSRF 964 (1008)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~i~~vT~edi~~~a~~~l~~~~~~~~~~~i~~p~~~~~ 964 (1008)
.+|..-. ..+..++|.+||.++|+++|.+|+-+ +...++.+||-+.+.
T Consensus 406 ~~Grri~-----l~El~~rId~vt~~~Vr~va~k~iyd---~~iAia~vG~ie~lp 453 (467)
T KOG0960|consen 406 TYGRRIP-----LAELEARIDAVTAKDVREVASKYIYD---KDIAIAAVGPIEGLP 453 (467)
T ss_pred hcCCcCC-----hHHHHHHHhhccHHHHHHHHHHHhhc---CCcceeeecccccCc
Confidence 3333322 37888999999999999999999988 888999999988553
No 14
>TIGR02110 PQQ_syn_pqqF coenzyme PQQ biosynthesis probable peptidase PqqF. In a subset of species that make coenzyme PQQ (pyrrolo-quinoline-quinone), this probable peptidase is found in the PQQ biosynthesis region and is thought to act as a protease on PqqA (TIGR02107), a probable peptide precursor of the coenzyme. PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases.
Probab=100.00 E-value=9.2e-37 Score=348.69 Aligned_cols=334 Identities=12% Similarity=0.051 Sum_probs=273.1
Q ss_pred EEEecCCcEEEEEecCCCCCeEEEEEEec-CcCCCCCcchhhhhchhHHHhhhcCCCCCCHH-HHHHHHcCceEEEEEEe
Q 001831 526 ELVLSNGMRVCYKCTDFLDDQVLFTGFSY-GGLSELPESEYLSCSMGSTIAGEIGVFGYRPS-MLMDMLAGKRVEGGTKV 603 (1008)
Q Consensus 526 ~~~L~NGl~v~~~~~~~~~~~v~~~~~~~-gg~~~~~~~~g~~~~l~~~l~~~~g~~~~~~~-~l~~~l~~~g~~~~~~~ 603 (1008)
.++|+||++|++.+++..+. +.+.+++. |+..+.++..|++|+++||+| .||++++.. ++.+.++..|+++|++|
T Consensus 2 ~~tL~NGLrVllv~~p~~p~-vav~l~v~aGS~~Ep~~~~GLAHfLEHMLF--kGT~~~~~~~~i~~~le~lGG~lNA~T 78 (696)
T TIGR02110 2 RITLPNGLRVHLYHQPDAKR-AAALLRVAAGSHDEPSAWPGLAHFLEHLLF--LGGERFQGDDRLMPWVQRQGGQVNATT 78 (696)
T ss_pred eEEcCCCCEEEEEECCCCCE-EEEEEEEeeccCCCCCCCCcHHHHHHHHHh--cCCCCCCcHHHHHHHHHHhCCeEEEEE
Confidence 46899999999999887664 77777554 555666679999999999999 699999985 79999999999999999
Q ss_pred cceeEEEEEecChhhHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHHhcCCCCcCCCC--
Q 001831 604 GAYMRTFSGDCSPSDLETALQLVYQLFTTNVAPGEEEVEIVMQMAEEVIRAQERDPYTAFANRVKEINYGNSYFFRPI-- 681 (1008)
Q Consensus 604 ~~~~~~~~~~~~~~~l~~~l~ll~~~l~~p~~~~~~~~~~~k~~~~~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-- 681 (1008)
+.+++.|++++++++++.+|+++.+++.+|.| ++++++++|+++++|+++..++|...+.+.+.+.+|++|||+++.
T Consensus 79 s~d~T~y~~~v~~~~l~~aL~lLaD~l~~P~f-~eeeierEr~vvl~Ei~~~~ddp~~~~~~~l~~~l~~~HPy~~~~iG 157 (696)
T TIGR02110 79 LERTTAFFFELPAAALAAGLARLCDMLARPLL-TAEDQQREREVLEAEYIAWQNDADTLREAALLDALQAGHPLRRFHAG 157 (696)
T ss_pred cCCeEEEEEEecHHHHHHHHHHHHHHHhCCCC-CHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHcCCCCCCCCCCCC
Confidence 99999999999999999999999999999999 899999999999999999999999999999999999999999876
Q ss_pred ChhhhhcCC---hhHHHHHHhhhhCCCCCcEEEEEecCCccchHHHHHHhhccCCCCCCCCCccccCCCCCCCcCCCCcc
Q 001831 682 RISDLQKVD---PLKACDYFNSCFKDPSTFTVVIVGNIDPSNGIPLILQYLGGIPKPPEPILHFNRDNLKGLPFTFPSSI 758 (1008)
Q Consensus 682 ~~~~i~~lt---~~~l~~~~~~~~~~~~~~~l~i~Gd~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~p~~~ 758 (1008)
+.++|++++ .++|++||++ ||.|+||+++|+||++++++.++++++|+.|+.+..+.. ..+.+ .. ..
T Consensus 158 t~esL~~it~~t~edL~~F~~~-~Y~p~NmvLvIvGdvs~eel~~l~e~~f~~~~~~~~~~~------~~~~p-~~-~~- 227 (696)
T TIGR02110 158 SRDSLALPNTAFQQALRDFHRR-HYQAGNMQLWLQGPQSLDELEQLAARFGASLAAGGECAQ------APPAP-LL-RF- 227 (696)
T ss_pred CHHHHhCcccchHHHHHHHHHH-hcchhcEEEEEEeCCCHHHHHHHHHHHhCCCCCCCCCCC------CCCCC-CC-CC-
Confidence 899998776 9999999996 889999999999999999999999999999986543320 01111 11 11
Q ss_pred ceeEEeCCCCCcceEEEEEeec-cCCCCcchHhHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeeeeeccCCCCCCCCCcc
Q 001831 759 IREVVRSPMVEAQCSVQLCFPV-ELKNGTMVEEINYVGFLSKLLETKMMQVLRFKHGQIYSASVSVFLGGNKHSRTGDVR 837 (1008)
Q Consensus 759 ~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~L~~~l~s~L~~~lRe~~gl~Y~~~~~~~~~~~~~~~~~~~~ 837 (1008)
....+.. ...++..+.+.+++ +..++ ....++..+|++.++++|+.+||+ +|++|+++++..+.. .+.
T Consensus 228 ~~~~~~~-~~~~q~~l~~~~p~~~~~d~--~al~lL~~iLg~g~sSrL~~~LRe-~GLaysV~s~~~~~~-------~g~ 296 (696)
T TIGR02110 228 DRLTLAG-GSEPRLWLLFALAGLPATAR--DNVTLLCEFLQDEAPGGLLAQLRE-RGLAESVAATWLYQD-------AGQ 296 (696)
T ss_pred ceeEEEe-cCcceEEEEEeecCCCCCCh--HHHHHHHHHhCCCcchHHHHHHHH-CCCEEEEEEeccccC-------CCC
Confidence 1122222 22355666666665 33333 234556678888889999999996 799999998653211 134
Q ss_pred eeEEEEEEe---CcccHHHHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHH
Q 001831 838 GDISINFSC---DPEISFKLVDLALDEISRLQKE--GPSDEDVSTILELEQR 884 (1008)
Q Consensus 838 g~~~i~~~~---~~~~~~~~~~~~~~~l~~i~~~--~is~~el~~ak~~~~~ 884 (1008)
+.|.|++.+ .+++.+++++.+.++|++++++ +++.+|+.++|..-..
T Consensus 297 ~lf~I~~~lt~~~~~~~~~v~~~i~~~L~~L~~~~~~~~~eel~rlk~~~~~ 348 (696)
T TIGR02110 297 ALLALEFSARCISAAAAQQIEQLLTQWLGALAEQTWAEQLEHYAQLAQRRFQ 348 (696)
T ss_pred cEEEEEEEEcCCCccCHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhhhh
Confidence 589999987 3568999999999999999988 8999999999986443
No 15
>KOG2067 consensus Mitochondrial processing peptidase, alpha subunit [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=8.1e-36 Score=297.49 Aligned_cols=410 Identities=12% Similarity=0.107 Sum_probs=337.8
Q ss_pred CCeEEEEecCCcEEEEEecCCCCCeEEEEE-EecCcCCCCCcchhhhhchhHHHhhhcCCCCCCHHHHHHHHcCceEEEE
Q 001831 522 LGATELVLSNGMRVCYKCTDFLDDQVLFTG-FSYGGLSELPESEYLSCSMGSTIAGEIGVFGYRPSMLMDMLAGKRVEGG 600 (1008)
Q Consensus 522 ~~~~~~~L~NGl~v~~~~~~~~~~~v~~~~-~~~gg~~~~~~~~g~~~~l~~~l~~~~g~~~~~~~~l~~~l~~~g~~~~ 600 (1008)
..++..+|+||++|...+++..- +.+.+ +-.|++.+.+.-.|++|+++.+.| ..+.+++..++...|+..|+...
T Consensus 23 ~~~kvttL~NGlkvase~~pg~f--~~vGlyIdsGsrYE~~~~~GisH~lerLAF--~ST~~~~~~ei~~~LE~~GGn~~ 98 (472)
T KOG2067|consen 23 SNTKVTTLPNGLKVASENTPGQF--CTVGLYIDSGSRYEAKYFSGISHFLERLAF--KSTERFSSKEILAELEKLGGNCD 98 (472)
T ss_pred ccceeeecCCccEEeccCCCCCc--eEEEEEEecCccccCcCcccHHHHHHHHhh--ccccCCcHHHHHHHHHHhCCccc
Confidence 35677899999999998876443 34444 456888888889999999999999 58999999999999999999999
Q ss_pred EEecceeEEEEEecChhhHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHHhcCCCCcCCC
Q 001831 601 TKVGAYMRTFSGDCSPSDLETALQLVYQLFTTNVAPGEEEVEIVMQMAEEVIRAQERDPYTAFANRVKEINYGNSYFFRP 680 (1008)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~l~~~l~ll~~~l~~p~~~~~~~~~~~k~~~~~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 680 (1008)
+.++++.+.|..++.++.++.++++|+|.+.+|+| ++++++.++..+.-|+......|..++.+.++...|.+...+.+
T Consensus 99 cqsSRetm~Yaas~~~~~v~sm~~lLadtV~~P~~-~d~ev~~~~~~v~~E~~el~~~Pe~lL~e~iH~Aay~~ntlg~p 177 (472)
T KOG2067|consen 99 CQSSRETMMYAASADSDGVDSMVELLADTVLNPKF-TDQEVEEARRAVKYEIEELWMRPEPLLTEMIHSAAYSGNTLGLP 177 (472)
T ss_pred ccccHhhhHHHHHhhhcccHHHHHHHHHHHhcccc-cHHHHHHHHHhhhheccccccCchhhHHHHHHHHHhccCccccc
Confidence 99999999999999999999999999999999999 89999999999999999999999999999999999999888887
Q ss_pred C--ChhhhhcCChhHHHHHHhhhhCCCCCcEEEEEecCCccchHHHHHHhhccCCCCCCCCCccccCCCCCCCcCCCCcc
Q 001831 681 I--RISDLQKVDPLKACDYFNSCFKDPSTFTVVIVGNIDPSNGIPLILQYLGGIPKPPEPILHFNRDNLKGLPFTFPSSI 758 (1008)
Q Consensus 681 ~--~~~~i~~lt~~~l~~~~~~~~~~~~~~~l~i~Gd~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~p~~~ 758 (1008)
. ..+.|..|+.+.|..|.++ ||+|.+|++..+| ++++++.+.++++|+.||....|..+.+......-....+.
T Consensus 178 l~cp~~~i~~I~~~~l~~yl~~-~ytp~rmVlA~vG-V~heelv~~~~~~~~~~~s~~~p~i~~~~aQYtGG~~~~~~-- 253 (472)
T KOG2067|consen 178 LLCPEENIDKINREVLEEYLKY-FYTPERMVLAGVG-VEHEELVEIAEKLLGDLPSTKVPPIDESKAQYTGGELKIDT-- 253 (472)
T ss_pred ccCChhhhhhhhHHHHHHHHHh-cCChhheEeeecC-CCHHHHHHHHHHHhccCCccCCCCcccchhhccccccccCC--
Confidence 7 7999999999999999995 8899999999888 79999999999999999986554433222221111111111
Q ss_pred ceeEEeCCCCCcceEEEEEeec-cCCCCcchHhHHHHHHHHH-----------HHHHHHHHHHhhhcCCeeeeeeeeecc
Q 001831 759 IREVVRSPMVEAQCSVQLCFPV-ELKNGTMVEEINYVGFLSK-----------LLETKMMQVLRFKHGQIYSASVSVFLG 826 (1008)
Q Consensus 759 ~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~L~~-----------~l~s~L~~~lRe~~gl~Y~~~~~~~~~ 826 (1008)
..-.......-++|.++|.+ ++.++|....+++..++|+ +|.||||.++-.++.|.|++-+..+..
T Consensus 254 --d~~~~~~g~EltHv~lg~Eg~~~~deD~v~~avLq~lmGGGGSFSAGGPGKGMySrLY~~vLNry~wv~sctAfnhsy 331 (472)
T KOG2067|consen 254 --DAPQVTGGPELTHVVLGFEGCSWNDEDFVALAVLQMLMGGGGSFSAGGPGKGMYSRLYLNVLNRYHWVYSCTAFNHSY 331 (472)
T ss_pred --CCccccCccceeeeeEeeccCCCCChhHHHHHHHHHHhcCCcccCCCCCCcchHHHHHHHHHhhhHHHHHhhhhhccc
Confidence 00000111257899999999 7888888887777777765 379999999999999999997775542
Q ss_pred CCCCCCCCCcceeEEEEEEeCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccchHHHHHHHHHhhcc
Q 001831 827 GNKHSRTGDVRGDISINFSCDPEISFKLVDLALDEISRLQKEGPSDEDVSTILELEQRAHETGLQENYHWLDRILCSYQS 906 (1008)
Q Consensus 827 ~~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~~l~~i~~~~is~~el~~ak~~~~~~~~~~~~~~~~~~~~l~~~~~~ 906 (1008)
+ +.|.|.|+.+++|+.+.+++.++.+++..+.. +++++|++|||..+...+..++++.-...+.+.++..
T Consensus 332 -------~-DtGlfgi~~s~~P~~a~~aveli~~e~~~~~~-~v~~~el~RAK~qlkS~LlMNLESR~V~~EDvGRQVL- 401 (472)
T KOG2067|consen 332 -------S-DTGLFGIYASAPPQAANDAVELIAKEMINMAG-GVTQEELERAKTQLKSMLLMNLESRPVAFEDVGRQVL- 401 (472)
T ss_pred -------c-CCceeEEeccCCHHHHHHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHHHHhcccccchhHHHHhHHHH-
Confidence 3 79999999999999999999999999999965 6999999999999999999999877666666666553
Q ss_pred ccccCCCCcchhhchhhHHHHHhcCCHHHHHHHHHHhcCCCCCCceEEEEEecCchh
Q 001831 907 RVYSGDVGTSFKIQDEARSKVRKSLQPLTLQLALQRIMPYPCNKQFTVVILMPQVSR 963 (1008)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~i~~vT~edi~~~a~~~l~~~~~~~~~~~i~~p~~~~ 963 (1008)
..|+... .+++.+.|+++|++||.++|.+.|.. +.++.-.|+...+
T Consensus 402 --~~g~rk~-----p~e~~~~Ie~lt~~DI~rva~kvlt~----~p~va~~Gd~~~l 447 (472)
T KOG2067|consen 402 --TTGERKP-----PDEFIKKIEQLTPSDISRVASKVLTG----KPSVAAFGDGTGL 447 (472)
T ss_pred --hccCcCC-----HHHHHHHHHhcCHHHHHHHHHHHhcC----CceeccCCcccCC
Confidence 2333333 38889999999999999999999975 7777777766533
No 16
>PRK15101 protease3; Provisional
Probab=100.00 E-value=3.3e-35 Score=367.59 Aligned_cols=408 Identities=12% Similarity=0.108 Sum_probs=315.1
Q ss_pred CCeEEEEecCCcEEEEEecCCCCCeEEEEEEec-CcCCCCCcchhhhhchhHHHhhhcCCCCCC-HHHHHHHHcCceEEE
Q 001831 522 LGATELVLSNGMRVCYKCTDFLDDQVLFTGFSY-GGLSELPESEYLSCSMGSTIAGEIGVFGYR-PSMLMDMLAGKRVEG 599 (1008)
Q Consensus 522 ~~~~~~~L~NGl~v~~~~~~~~~~~v~~~~~~~-gg~~~~~~~~g~~~~l~~~l~~~~g~~~~~-~~~l~~~l~~~g~~~ 599 (1008)
..++.++|+||++|++.+++..+. +.+.+.+. |+..+.++..|++|+++||+| .||++++ ..++.+.++..|+++
T Consensus 42 ~~~~~~~L~NGL~v~l~~~~~~~~-~~~~l~v~~Gs~~ep~~~~GlAHflEHmlf--~GT~~~p~~~~~~~~l~~~Gg~~ 118 (961)
T PRK15101 42 RQYQAIRLDNGMTVLLVSDPQAVK-SLAALALPVGSLEDPDAQQGLAHYLEHMVL--MGSKKYPQPDSLAEFLKKHGGSH 118 (961)
T ss_pred cceEEEEeCCCCEEEEEeCCCCcc-eeEEEEeCcCCCCCCCCCCchHHHHHHHHh--cCCccCCCcchHHHHHHHhCCCc
Confidence 356788999999999999987664 77777555 555555578999999999999 7999996 578999999999999
Q ss_pred EEEecceeEEEEEecChhhHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHHhcCCCCcCC
Q 001831 600 GTKVGAYMRTFSGDCSPSDLETALQLVYQLFTTNVAPGEEEVEIVMQMAEEVIRAQERDPYTAFANRVKEINYGNSYFFR 679 (1008)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~l~~~l~ll~~~l~~p~~~~~~~~~~~k~~~~~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 679 (1008)
|++|+.+.|.|++++++++++.+|+++++++.+|.| ++++++++|+++.+|+++..++|...+.+.+.+.+|++|||++
T Consensus 119 NA~T~~d~T~y~~~~~~~~l~~aL~~~ad~~~~P~f-~~~~~erE~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~hp~~~ 197 (961)
T PRK15101 119 NASTASYRTAFYLEVENDALPPAVDRLADAIAEPLL-DPKNADRERNAVNAELTMARSRDGMRMAQVSAETINPAHPGSR 197 (961)
T ss_pred cceECCCceEEEEEcCHHHHHHHHHHHHHHHhccCC-CHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhCCCCCCccc
Confidence 999999999999999999999999999999999999 8999999999999999999999999999999999999999998
Q ss_pred CC--ChhhhhcC----ChhHHHHHHhhhhCCCCCcEEEEEecCCccchHHHHHHhhccCCCCCCCCCccccCCCCCCCcC
Q 001831 680 PI--RISDLQKV----DPLKACDYFNSCFKDPSTFTVVIVGNIDPSNGIPLILQYLGGIPKPPEPILHFNRDNLKGLPFT 753 (1008)
Q Consensus 680 ~~--~~~~i~~l----t~~~l~~~~~~~~~~~~~~~l~i~Gd~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 753 (1008)
+. +.++|+++ +.++|++||++ ||.|+||+++|+||++++++.++++++|+.|+.+..+.+ ... .+..
T Consensus 198 ~~~G~~etl~~~~~~~~~~~L~~f~~~-~Y~p~nm~lvv~G~~~~~~l~~~~~~~F~~~~~~~~~~~-----~~~-~~~~ 270 (961)
T PRK15101 198 FSGGNLETLSDKPGSKLQDALVDFYQR-YYSANLMKAVIYSNQPLPELAKLAADTFGRVPNKNASVP-----EIT-VPVV 270 (961)
T ss_pred CCCCCHHHhhcCCchHHHHHHHHHHHH-hCcccceEEEEEcCCCHHHHHHHHHHHhccCCCCCCCCC-----CCC-CCCC
Confidence 76 89999987 69999999996 889999999999999999999999999999987643221 000 1111
Q ss_pred CCCccceeEEeCCCCCcceEEEEEeeccCCCCcch--HhHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeeeeeccCCCCC
Q 001831 754 FPSSIIREVVRSPMVEAQCSVQLCFPVELKNGTMV--EEINYVGFLSKLLETKMMQVLRFKHGQIYSASVSVFLGGNKHS 831 (1008)
Q Consensus 754 ~p~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~--~~~~~~~~L~~~l~s~L~~~lRe~~gl~Y~~~~~~~~~~~~~~ 831 (1008)
.+......+...+ ..++..+.+.|+.+.....+. ...++..+|++...+.|+..|+ ++|++|+++++.....
T Consensus 271 ~~~~~~~~~~~~~-~~~~~~l~l~~~~p~~~~~~~~~~~~~l~~ll~~~~~g~l~~~L~-~~gla~~v~s~~~~~~---- 344 (961)
T PRK15101 271 TDAQKGIIIHYVP-AQPRKVLRVEFRIDNNSAKFRSKTDEYISYLIGNRSPGTLSDWLQ-KQGLAEGISAGADPMV---- 344 (961)
T ss_pred CHHHcCeEEEEEE-CCCCcEEEEEEecCCcHHHHhhCHHHHHHHHhcCCCCCcHHHHHH-HcCccceeeecccccc----
Confidence 1111111122122 245677888888754322211 2234455666665667888885 7899999988754211
Q ss_pred CCCCcceeEEEEEEeCcc---cHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhh-ccchHHHHHHHHHhhccc
Q 001831 832 RTGDVRGDISINFSCDPE---ISFKLVDLALDEISRLQKEGPSDEDVSTILELEQRAHETG-LQENYHWLDRILCSYQSR 907 (1008)
Q Consensus 832 ~~~~~~g~~~i~~~~~~~---~~~~~~~~~~~~l~~i~~~~is~~el~~ak~~~~~~~~~~-~~~~~~~~~~l~~~~~~~ 907 (1008)
+.+.|.|.|++.+.++ +.+++++.+.++|+.++++|++++||+++|..+...+... ..........+.....
T Consensus 345 --~~~~g~f~i~~~~~~~~~~~~~~v~~~i~~~i~~l~~~g~~~~el~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 420 (961)
T PRK15101 345 --DRNSGVFAISVSLTDKGLAQRDQVVAAIFSYLNLLREKGIDKSYFDELAHVLDLDFRYPSITRDMDYIEWLADTML-- 420 (961)
T ss_pred --CCCceEEEEEEEcChHHHHhHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhccccCCCCCChHHHHHHHHHHhh--
Confidence 0147899999998874 8899999999999999999999999999999888766432 1222222233333221
Q ss_pred cccCCCCcchhhchhhHHHHHhcCCHHHHHHHHHHhcCCCCCCceEEEEEecCc
Q 001831 908 VYSGDVGTSFKIQDEARSKVRKSLQPLTLQLALQRIMPYPCNKQFTVVILMPQV 961 (1008)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~i~~vT~edi~~~a~~~l~~~~~~~~~~~i~~p~~ 961 (1008)
...++.. ......+..+++++|+++++. |.+ ++..+++++|..
T Consensus 421 --~~~~~~~-----l~~~~~~~~~~~~~i~~~~~~-l~~---~n~~i~~~~~~~ 463 (961)
T PRK15101 421 --RVPVEHT-----LDAPYIADRYDPKAIKARLAE-MTP---QNARIWYISPQE 463 (961)
T ss_pred --hCCHHHh-----eeCchhhhcCCHHHHHHHHhh-cCH---hHEEEEEEeCCC
Confidence 1122221 233567889999999999977 788 899999999874
No 17
>PTZ00432 falcilysin; Provisional
Probab=99.97 E-value=8.1e-29 Score=303.69 Aligned_cols=420 Identities=11% Similarity=0.041 Sum_probs=291.2
Q ss_pred EecCCcEEEEEecCCC-CCeEEEEEEecCcCCCCCcchhhhhchhHHHhhhcCCCCCCHHHHHHHHcCce--EEEEEEec
Q 001831 528 VLSNGMRVCYKCTDFL-DDQVLFTGFSYGGLSELPESEYLSCSMGSTIAGEIGVFGYRPSMLMDMLAGKR--VEGGTKVG 604 (1008)
Q Consensus 528 ~L~NGl~v~~~~~~~~-~~~v~~~~~~~gg~~~~~~~~g~~~~l~~~l~~~~g~~~~~~~~l~~~l~~~g--~~~~~~~~ 604 (1008)
-.+||++|++.+++.. ...+.+.+.+..|. .+..|++|+++||+| .|+++++..++...++..| +.+|++|+
T Consensus 96 H~~nGl~vl~~~~~d~~~~~~~f~i~f~T~~---~d~~G~aH~LEH~~f--~GS~k~p~~~~~~~l~~~gl~~~lNA~T~ 170 (1119)
T PTZ00432 96 HKKTGLQVISLKTNDSSGKEMCFDFYVPTPP---HNDKGIPHILEHSVL--SGSKKYNYKDSFSLLVQGGFNSFLNAYTF 170 (1119)
T ss_pred EcCCCCEEEEEecCCCccceeEEEEEecCCC---CCCcchhHHHHHHHh--CCCCCCCcccHHHHHHhcCcCCCccccCC
Confidence 3459999999986543 12366666665453 457899999999999 7999999999888887765 77999999
Q ss_pred ceeEEEEEecChh-hHHHHHHHHHHHhccCCCCCHHHH--H---------HH--------------------HHHHHHHH
Q 001831 605 AYMRTFSGDCSPS-DLETALQLVYQLFTTNVAPGEEEV--E---------IV--------------------MQMAEEVI 652 (1008)
Q Consensus 605 ~~~~~~~~~~~~~-~l~~~l~ll~~~l~~p~~~~~~~~--~---------~~--------------------k~~~~~e~ 652 (1008)
.|+|.|.+.++++ ++..+|+++.+++.+|.+ +++++ . ++ ++++.+|+
T Consensus 171 ~D~T~Y~~~~~~e~d~~~~ldv~~d~v~~P~~-~~~~~~f~qEgwh~E~~~~~~~~~~~~e~~~~~~~~l~~kgVV~~Em 249 (1119)
T PTZ00432 171 KDRTSYLFASTNEKDFYNTADVYMDSVFQPNI-LEDKDIFKQEGWHYKVTKLKDDEKNADELGNVHDRHVSYSGIVYSEM 249 (1119)
T ss_pred CCceEEEeccCCHHHHHHHHHHHHHHHhCcCc-ccccchhhhhhhhccccccccccccccccccccccccchhhHHHHHH
Confidence 9999999999875 699999999999999999 45542 2 21 78899999
Q ss_pred HHhhcChHHHHHHHHHHHhcCCCCcCCCC--ChhhhhcCChhHHHHHHhhhhCCCCCcEEEEEecCCccchHHHHHHhhc
Q 001831 653 RAQERDPYTAFANRVKEINYGNSYFFRPI--RISDLQKVDPLKACDYFNSCFKDPSTFTVVIVGNIDPSNGIPLILQYLG 730 (1008)
Q Consensus 653 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~lt~~~l~~~~~~~~~~~~~~~l~i~Gd~~~~~~~~~i~~~~~ 730 (1008)
+...++|...+.+.+.+.+| +|||+.+. ++++|.++|.+++++||++ ||.|+|+.++|+||++++++.++++++|+
T Consensus 250 k~~~~~p~~~~~~~~~~~lf-~~pY~~~~~G~~~~I~~lt~e~l~~Fh~~-~Y~P~N~~l~v~Gdid~~~~l~~l~~~f~ 327 (1119)
T PTZ00432 250 KKRFSDPLSFGYSVIYQNLF-SNVYKYDSGGDPKDIVELTYEELVEFYKT-YYGPKTATVYFYGPNDVTERLEFVDNYLT 327 (1119)
T ss_pred HHhhCCHHHHHHHHHHHHHh-CCCCCCCCCCChHhhccCCHHHHHHHHHH-hcCccceEEEEEcCCCHHHHHHHHHHHHh
Confidence 99999999999999999999 99999876 9999999999999999996 88999999999999999999999999998
Q ss_pred cCCCCCCCCCccccC-CCCCCCcCCCCccceeEE--eCCCCCcceEEEEE-eec-cC-----------CC-CcchHhHHH
Q 001831 731 GIPKPPEPILHFNRD-NLKGLPFTFPSSIIREVV--RSPMVEAQCSVQLC-FPV-EL-----------KN-GTMVEEINY 793 (1008)
Q Consensus 731 ~l~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~~--~~~~~~~~~~v~~~-~~~-~~-----------~~-~~~~~~~~~ 793 (1008)
.+|............ ...+.+...+......+. .......+..+.++ |+. +. .+ .++.+..++
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~e~~~l~~~~w~~~p~~~~~~~~~~~~~d~~~~~AL~VL 407 (1119)
T PTZ00432 328 KHPKTGQLSHTAYREDADENLLYEEYKDKPKHVKKKFSSHSEEEENLMSVSWLLNPKHNGSKDYDKSLIDPVDYLALLVL 407 (1119)
T ss_pred hcccccccccccccccccccccccccccCCeEEEeccCCCccccccEEEEEEEcCCccccccccccccCCHHHHHHHHHH
Confidence 887542211000000 000000000000111111 11112234445554 865 22 11 233444455
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCeeee-eeeeeccCCCCCCCCCcceeEEEEEE-eC-------cccHHHHHHHHHHHHHH
Q 001831 794 VGFLSKLLETKMMQVLRFKHGQIYSA-SVSVFLGGNKHSRTGDVRGDISINFS-CD-------PEISFKLVDLALDEISR 864 (1008)
Q Consensus 794 ~~~L~~~l~s~L~~~lRe~~gl~Y~~-~~~~~~~~~~~~~~~~~~g~~~i~~~-~~-------~~~~~~~~~~~~~~l~~ 864 (1008)
..+|++..+|+|++.||+ .|++|++ +++..... ..+.|.|.+. +. +++++++.+.+.++|++
T Consensus 408 s~lLggg~sS~L~q~LrE-~GLa~svv~~~~~~~~--------~~~~f~I~l~g~~~~~~~~~~~~~~ev~~~I~~~L~~ 478 (1119)
T PTZ00432 408 NYLLLGTPESVLYKALID-SGLGKKVVGSGLDDYF--------KQSIFSIGLKGIKETNEKRKDKVHYTFEKVVLNALTK 478 (1119)
T ss_pred HHHHcCCCccHHHHHHHh-cCCCcCCCcCcccCCC--------CceEEEEEEEcCChHhccchhhhHHHHHHHHHHHHHH
Confidence 666777779999999996 7999986 33332211 5678888875 44 23477999999999999
Q ss_pred HHhCCCCHHHHHHHHHHHHHHHHhhcc----chHHHHHHHHHhhccccccCCCCcchhh--chhhHHHHHhcCCHHHHHH
Q 001831 865 LQKEGPSDEDVSTILELEQRAHETGLQ----ENYHWLDRILCSYQSRVYSGDVGTSFKI--QDEARSKVRKSLQPLTLQL 938 (1008)
Q Consensus 865 i~~~~is~~el~~ak~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~vT~edi~~ 938 (1008)
++++||+++++++++..+..++..... ..-.++..+...+. +.+++...+.+ .++.++..+ .-+..-+.+
T Consensus 479 l~~eGi~~eele~a~~qlef~~rE~~~~~~p~gl~~~~~~~~~~~---~g~dp~~~l~~~~~l~~lr~~~-~~~~~y~e~ 554 (1119)
T PTZ00432 479 VVTEGFNKSAVEASLNNIEFVMKELNLGTYPKGLMLIFLMQSRLQ---YGKDPFEILRFEKLLNELKLRI-DNESKYLEK 554 (1119)
T ss_pred HHHhCCCHHHHHHHHHHHHHHhhhccCCCCCcHHHHHHHHHHHHh---cCCCHHHHHhhHHHHHHHHHHH-hcccHHHHH
Confidence 999999999999999887766654321 12233334444332 22343332111 123344444 223456999
Q ss_pred HHHHhcCCCCCCceEEEEEecCc--hhhHHHHhh
Q 001831 939 ALQRIMPYPCNKQFTVVILMPQV--SRFKFLRSL 970 (1008)
Q Consensus 939 ~a~~~l~~~~~~~~~~~i~~p~~--~~~~~l~~~ 970 (1008)
+.++||-+ +...+++++.|.+ .+.+.+++-
T Consensus 555 Li~k~ll~--N~h~~~v~~~p~~s~~~~~~~~~~ 586 (1119)
T PTZ00432 555 LIEKHLLN--NNHRVTVHLEAVESSKYEKEFNKL 586 (1119)
T ss_pred HHHHHccC--CCeeeEEEEecCCcccHHHHHHHH
Confidence 99999844 1566777777776 555554443
No 18
>KOG2583 consensus Ubiquinol cytochrome c reductase, subunit QCR2 [Energy production and conversion]
Probab=99.95 E-value=5.3e-25 Score=221.43 Aligned_cols=384 Identities=14% Similarity=0.086 Sum_probs=281.4
Q ss_pred CcEEEEcCCCcEEEEeecCCCCceEEEEEEEcccCCCCCCCCCChhHHHHHHccCCCCCCChhhHHHHHHHcccccCCCc
Q 001831 37 GVDYGRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDIIKFLESIGAEFGACQ 116 (1008)
Q Consensus 37 ~i~~~~L~NGl~v~~~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ahllehl~f~gs~~~~~~~~~~~l~~~g~~~g~~~ 116 (1008)
.....+|.|||+|..++++.+. .++.|.|++||++|+.++.|++|++....++-|+.+++..|.+..+..|..+
T Consensus 22 ~~~~~kl~ngL~Vas~e~~~~i--s~l~l~~~AGSRYe~~~~~G~sHllr~f~g~~Tq~~sal~ivr~se~~GG~L---- 95 (429)
T KOG2583|consen 22 ISKTTKLVNGLTVASREAPTAI--SSLSLAFRAGSRYEPADQQGLSHLLRNFVGRDTQERSALKIVRESEQLGGTL---- 95 (429)
T ss_pred hhhhhccccceEEEeccCCCcc--eEEEEEEecCccCCccccccHHHHHHHhcccCccccchhhhhhhhHhhCcee----
Confidence 4677899999999999988875 7899999999999999999999999999999999999999999999988665
Q ss_pred cccccCCeEEEEEECCCCCHHHHHHHHHHHHHhccCCCCChHHHHHHH-HHHHHHHhcCCCchhhhHHHHHHHHhcCCCC
Q 001831 117 NAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEKER-GAVLEEYRGNRNASGRMQDAHWVLMMEGSKY 195 (1008)
Q Consensus 117 na~T~~d~t~y~~~~~~~~~~~l~~~l~~l~d~~~~p~~~~~~~~~er-~~v~~e~~~~~~~~~~~~~~~~~~~~~~~p~ 195 (1008)
+.++++|+..|.++++.++ ++-.|.+|.+++..|.|.+++++... ..|..+.. ++++...+.++++++.|.. .+
T Consensus 96 ss~~tRe~~~~tvt~lrd~---~~~~l~~L~~V~~~paFkPwEl~D~~~~ti~~~l~-~~t~~~~a~e~lH~aAfRn-gL 170 (429)
T KOG2583|consen 96 SSTATRELIGLTVTFLRDD---LEYYLSLLGDVLDAPAFKPWELEDVVLATIDADLA-YQTPYTIAIEQLHAAAFRN-GL 170 (429)
T ss_pred eeeeecceEEEEEEEeccc---HHHHHHHHHHhhcccCcCchhhhhhhhhhhHHHhh-hcChHHHHHHHHHHHHHhc-cc
Confidence 8999999999999999766 99999999999999999999999988 66666654 4556667799999999986 67
Q ss_pred CccCCCCCHHHhcCCCHHHHHHHHHhcccCCCcEEEEEccCCCHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCce
Q 001831 196 AECLPIGLEKVIRTVSSDTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPPVIPKFPVPSHQEPRF 275 (1008)
Q Consensus 196 ~~~~~~g~~~~i~~it~~~l~~f~~~~y~p~n~~l~i~Gdi~d~~~~~~~i~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (1008)
| ++.+.+--.+.+++.++|..|-+++|+.+|++|+-+| + |++.+....++++ .++........+. .-...+.|
T Consensus 171 g-nslY~p~~~vg~vss~eL~~Fa~k~fv~gn~~lvg~n-v-d~~~L~~~~~~~~-~~~~~~~~k~a~a--~~~gGe~R- 243 (429)
T KOG2583|consen 171 G-NSLYSPGYQVGSVSSSELKDFAAKHFVKGNAVLVGVN-V-DHDDLKQFADEYA-PIRDGLPLKPAPA--KYSGGEAR- 243 (429)
T ss_pred C-CcccCCcccccCccHHHHHHHHHHHhhccceEEEecC-C-ChHHHHHHHHHhc-cccCCCCCCCCCc--cccCCccc-
Confidence 6 6666666678999999999999999999999999998 7 9999999999983 2322111111110 00011111
Q ss_pred EEEecCCCCceEEEEEEEcCCCcCCCHHHHHHHHHHHHHHHHH-----HHHHHHHhccCCCCeeeeeeccCcccccccEE
Q 001831 276 SCFIESEAGGSAVIVSYKMPVNELKTIKDYKEMLTESMFLHAL-----NQRFFKLSRRKDPPYFSCSASADDLVRPLKAY 350 (1008)
Q Consensus 276 ~~~~~~~~~~~~v~l~~~~p~~~~~~~~~~~~~~l~~il~~~~-----~srL~~~lr~~~g~~~~~~~~~~~~~~~~~~~ 350 (1008)
.+...+..+|.+.-. +....+.+...+..++.+.|+... .+.|.+....-.+--.++.++...+ .+.|+|
T Consensus 244 ---k~~~g~~~~v~vage-gAAa~~~k~~~a~av~~~~Lg~~~~~k~~t~~~~~aa~~a~~~~~s~sA~~a~y-sDsGL~ 318 (429)
T KOG2583|consen 244 ---KDARGNRVHVAVAGE-GAAAGNLKVLAAQAVLLAALGNSAPVKRGTGLLSEAAGAAGEQGASASAFNAPY-SDSGLF 318 (429)
T ss_pred ---cccCCceeEEEEecC-cccccchHHHHHHHHHHHHHhcccccccccchHHHHHhhccccCceeeeecccc-cCCceE
Confidence 223333444443322 223334667778888889988655 4444433321111223444555544 899999
Q ss_pred EEEEEecCCcHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhccCCcHHHHHHHHHHhhcCCCccCHHH
Q 001831 351 IMSSSCKERGTLKALESMLIEVARVRLHGFSEREVSVARALLMSEVESAYLERDQMQSTNLRDECLQHFLCKEPIIGIEY 430 (1008)
Q Consensus 351 ~i~~~~~~~~~~~~~~~i~~~l~~l~~~g~s~~el~~ak~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (1008)
++++..+..+..++++.....++.....+++-.-...+++.+......+... +-.. ......... .+.
T Consensus 319 gv~~~~~~~~a~~~v~s~v~~lks~~~~~id~~~~~a~~~~l~~~~~ss~~a--------~~~~-~~~~a~~~~--~~d- 386 (429)
T KOG2583|consen 319 GVYVSAQGSQAGKVVSSEVKKLKSALVSDIDNAKVKAAIKALKASYLSSVEA--------LELA-TGSQANLVS--EPD- 386 (429)
T ss_pred EEEEEecCccHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhhcchHH--------HHHh-hHHHhcCCC--ChH-
Confidence 9999998889999999988888888888888777777777666554333211 1111 111111111 122
Q ss_pred HHHHHHHHcCCCCHHHHHHHHHHhcccC
Q 001831 431 EARLQKTLLPHISALEVSRYSEKLQTSC 458 (1008)
Q Consensus 431 ~~~~~~~~i~~it~edv~~~~~~~l~~~ 458 (1008)
.+++.|+.|++.||.+++++++..+
T Consensus 387 ---~~i~~id~Vt~sdV~~a~kk~~s~k 411 (429)
T KOG2583|consen 387 ---AFIQQIDKVTASDVQKAAKKFLSGK 411 (429)
T ss_pred ---HHHHHhccccHHHHHHHHHHhccCc
Confidence 3456699999999999999987433
No 19
>COG1025 Ptr Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones]
Probab=99.94 E-value=7.2e-24 Score=239.09 Aligned_cols=411 Identities=12% Similarity=0.112 Sum_probs=299.3
Q ss_pred cCCCeEEEEecCCcEEEEEecCCCCCeEEEEEEecCcCCCCCcchhhhhchhHHHhhhcCCCCCCHHH-HHHHHcCceEE
Q 001831 520 ENLGATELVLSNGMRVCYKCTDFLDDQVLFTGFSYGGLSELPESEYLSCSMGSTIAGEIGVFGYRPSM-LMDMLAGKRVE 598 (1008)
Q Consensus 520 ~~~~~~~~~L~NGl~v~~~~~~~~~~~v~~~~~~~gg~~~~~~~~g~~~~l~~~l~~~~g~~~~~~~~-l~~~l~~~g~~ 598 (1008)
....++.++|+||+++.+..+|..........+..|+..++.+-.|+||++|||+| +|+++|+... +..+|+.+|++
T Consensus 20 d~r~y~~I~LpNGl~~LlisDP~a~ks~aAL~V~vGs~~DP~e~~GLAHflEHmlf--mGseKYP~~~~f~~fLskhgGs 97 (937)
T COG1025 20 DDRKYRAIKLPNGLRALLVSDPQADKSSAALVVPVGSFDDPEEYPGLAHFLEHMLF--MGSEKYPDEGGFSEFLSKHGGS 97 (937)
T ss_pred cCcceeEEECCCCceEEEecCCCCCccceeEEeecCCCCChhhcccHHHHHHHHHH--hcCccCCCccchHHHHHHcCCc
Confidence 34467889999999999999998776343333555555555568899999999999 8999998766 99999999999
Q ss_pred EEEEecceeEEEEEecChhhHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHHhcCCCCcC
Q 001831 599 GGTKVGAYMRTFSGDCSPSDLETALQLVYQLFTTNVAPGEEEVEIVMQMAEEVIRAQERDPYTAFANRVKEINYGNSYFF 678 (1008)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~l~~~l~ll~~~l~~p~~~~~~~~~~~k~~~~~e~~~~~~~p~~~~~~~~~~~~~~~~~~~ 678 (1008)
.|++|..+.|+|.+.+.++.++.+|+.+++++.+|.| +++..++|+..+.+|......+-+..+++.....+-++||+.
T Consensus 98 ~NA~T~~~~T~fyFeV~~~al~~ALDrFa~ff~~PLf-~~e~~dRE~~AV~sE~~~~~~~D~~R~~~~~~~~~np~HP~s 176 (937)
T COG1025 98 HNASTAGERTAFYFEVENDALEGALDRFADFFIEPLF-NKEALDRERNAVNSEFTMNLTSDGWRMYQVQALTANPGHPLS 176 (937)
T ss_pred cccccCCCceeEEEEecHHHHHHHHHHHHHHHhcccc-ChHHHHHHHHHHHHHHhcCcCchHHHHHHHHHhhcCCCCCcc
Confidence 9999999999999999999999999999999999999 899999999999999999999999899888888888899998
Q ss_pred CCC--Chhhhhc----CChhHHHHHHhhhhCCCCCcEEEEEecCCccchHHHHHHhhccCCCCCCCCCccccCCCCCCCc
Q 001831 679 RPI--RISDLQK----VDPLKACDYFNSCFKDPSTFTVVIVGNIDPSNGIPLILQYLGGIPKPPEPILHFNRDNLKGLPF 752 (1008)
Q Consensus 679 ~~~--~~~~i~~----lt~~~l~~~~~~~~~~~~~~~l~i~Gd~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~ 752 (1008)
+.. ..+.+.. ...++|++||++ +|.++||+++|.|+-+.+++.+++.++||.+|......+ ..+ .++
T Consensus 177 rFs~GN~~TL~~~p~~~v~~el~ef~~~-~YSa~~M~lviyg~q~ldeL~~~a~~~F~~Ipn~~~~~p-----~~p-~p~ 249 (937)
T COG1025 177 KFSTGNLETLSDKPGLVVQQELKEFHEK-HYSANNMKLVIYGNQPLDELAKLAADLFGDIPNRARKIP-----PIP-VPV 249 (937)
T ss_pred ccCCCChhhhccCCCchHHHHHHHHHHH-hcChhheEEEEecCCCHHHHHHHHHHHhCcCCCCCCCCC-----CCC-CCC
Confidence 765 5556655 467899999996 778999999999999999999999999999997654431 111 111
Q ss_pred CCCCccceeEEeCCCCCcceEEEEEeeccCCCCcch--HhHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeeeeeccCCCC
Q 001831 753 TFPSSIIREVVRSPMVEAQCSVQLCFPVELKNGTMV--EEINYVGFLSKLLETKMMQVLRFKHGQIYSASVSVFLGGNKH 830 (1008)
Q Consensus 753 ~~p~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~--~~~~~~~~L~~~l~s~L~~~lRe~~gl~Y~~~~~~~~~~~~~ 830 (1008)
-.+.... .++......+...+.+.|+.+.....+. ....+..+||.-=.+-|-.-| .+.||+-++.+......
T Consensus 250 ~~d~~t~-~ii~i~p~~~~~~L~i~f~i~~~~~~~~~~~~~~~s~Lig~es~gsL~~~L-k~~Glit~l~a~~~~~~--- 324 (937)
T COG1025 250 VTDEQTG-KIIHIVPAKPRPRLRIYFPIDDNSAKFRSKPDEYLSHLIGNESPGSLLAWL-KKQGLITELSAGLDPIS--- 324 (937)
T ss_pred CChHHhC-ceEEeccCCCCceEEEEEEcCCcccccccCCHHHHHHHhccCCCchHHHHH-Hhccchhhhcccccccc---
Confidence 1222222 2333333346667778888754332221 113334455441122233444 47799999888765322
Q ss_pred CCCCCcceeEEEEEEe---CcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhc-cchHHHHHHHHHhhcc
Q 001831 831 SRTGDVRGDISINFSC---DPEISFKLVDLALDEISRLQKEGPSDEDVSTILELEQRAHETGL-QENYHWLDRILCSYQS 906 (1008)
Q Consensus 831 ~~~~~~~g~~~i~~~~---~~~~~~~~~~~~~~~l~~i~~~~is~~el~~ak~~~~~~~~~~~-~~~~~~~~~l~~~~~~ 906 (1008)
+ +.|.|.|.... --.+.++++..+.+.|+-++++++....|++.....-..+.... .......+.+......
T Consensus 325 ---~-n~~~f~is~~LT~~Gl~~~~~VI~~~F~yl~~l~~~~~~~~~f~Elq~v~~l~f~y~~~t~~~~~~~~l~~~m~~ 400 (937)
T COG1025 325 ---G-NYGVFAISYELTDKGLAHYDRVIALTFQYLNLLREKGIPKYTFDELQNVLDLDFRYPSKTRPMDYVSWLADNMER 400 (937)
T ss_pred ---C-CcceEEEEeehhhcchhhHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhcccccCChHHHHHHHHHhccc
Confidence 2 57778887654 34588999999999999999999999999887664444443332 2333344444443321
Q ss_pred ccccCCCCcchhhchhhHHHHHhcCCHHHHHHHHHHhcCCCCCCceEEEEEecCch
Q 001831 907 RVYSGDVGTSFKIQDEARSKVRKSLQPLTLQLALQRIMPYPCNKQFTVVILMPQVS 962 (1008)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~i~~vT~edi~~~a~~~l~~~~~~~~~~~i~~p~~~ 962 (1008)
..++ .+ ......+..=.+++++.+..-.. | ++..+..+++.+.
T Consensus 401 ----~p~~-~~----~~~~~~~~~yd~~~~~~~l~~~~-p---en~R~~lis~~~~ 443 (937)
T COG1025 401 ----EPVE-HT----LYASLVLPRYDPKAIQERLALMT-P---ENARLWLISKLEE 443 (937)
T ss_pred ----CChh-hh----hchhhcccccCHHHHHHHHHhhC-c---cceEEEEecCCCC
Confidence 1121 11 22234566667789999997766 7 8888888777653
No 20
>KOG0959 consensus N-arginine dibasic convertase NRD1 and related Zn2+-dependent endopeptidases, insulinase superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=99.91 E-value=1.1e-21 Score=226.25 Aligned_cols=402 Identities=14% Similarity=0.125 Sum_probs=288.4
Q ss_pred CeEEEEecCCcEEEEEecCCCCCeEEEEE-EecCcCCCCCcchhhhhchhHHHhhhcCCCCCCHHH-HHHHHcCceEEEE
Q 001831 523 GATELVLSNGMRVCYKCTDFLDDQVLFTG-FSYGGLSELPESEYLSCSMGSTIAGEIGVFGYRPSM-LMDMLAGKRVEGG 600 (1008)
Q Consensus 523 ~~~~~~L~NGl~v~~~~~~~~~~~v~~~~-~~~gg~~~~~~~~g~~~~l~~~l~~~~g~~~~~~~~-l~~~l~~~g~~~~ 600 (1008)
..+..+|+||+++.+..++.... ..+.+ +..|+..++.+..|+||+++||+| +|+.+|+.+. +..++...|++-|
T Consensus 27 ~yr~~~L~Ngl~alLisDp~tD~-ssaal~V~vGS~~DP~dl~GLAHF~EHMlF--mGS~KYP~En~y~~~lsk~gGssN 103 (974)
T KOG0959|consen 27 EYRGIELTNGLRALLISDPKTDK-SSAALDVKVGSFSDPEDLQGLAHFCEHMLF--MGSEKYPDENEYSKFLSKNGGSSN 103 (974)
T ss_pred ceeEEEecCCceEEEecCCCCCc-cceeeeeeccccCCccccccHHHHHHHHHh--hccccCCCcchhHHHHHhcCCccc
Confidence 67889999999999999976444 44434 777888888889999999999999 8999997554 8899999999999
Q ss_pred EEecceeEEEEEecChhhHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHHhcCCCCcCCC
Q 001831 601 TKVGAYMRTFSGDCSPSDLETALQLVYQLFTTNVAPGEEEVEIVMQMAEEVIRAQERDPYTAFANRVKEINYGNSYFFRP 680 (1008)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~l~~~l~ll~~~l~~p~~~~~~~~~~~k~~~~~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 680 (1008)
|+|..+.|+|++.+..++++.+|+.+++.+.+|.| .++..++++..+.+|..+..++-.....+....+.-++||+++.
T Consensus 104 A~T~~e~T~y~F~V~~~~l~~ALDrFaqFf~~Plf-~~~a~eREv~AVdSE~~~nl~~D~wr~~ql~~~l~~~~hp~~kF 182 (974)
T KOG0959|consen 104 AYTDSEHTNYYFDVQHDHLEGALDRFAQFFSDPLF-NKSATEREVGAVDSEHEKNLNSDGWRFDQLLRSLSNPGHPYSKF 182 (974)
T ss_pred cccccccceEEEecchHHHHHHHHHHHHHhhCccc-ChHHHHHHHHHHHHHHHhccCcchhHHHHHHHHhcCCCCcchhc
Confidence 99999999999999999999999999999999999 89999999999999999999998888888888888899999886
Q ss_pred C--ChhhhhcCC-----hhHHHHHHhhhhCCCCCcEEEEEecCCccchHHHHHHhhccCCCCCCCCCccccCCCCCCCcC
Q 001831 681 I--RISDLQKVD-----PLKACDYFNSCFKDPSTFTVVIVGNIDPSNGIPLILQYLGGIPKPPEPILHFNRDNLKGLPFT 753 (1008)
Q Consensus 681 ~--~~~~i~~lt-----~~~l~~~~~~~~~~~~~~~l~i~Gd~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 753 (1008)
. ..+.|.... .+.|.+||++ ||.+++|+++|+|+.+.+.+..++.+.|+.++....+.+. ++..+ .
T Consensus 183 ~tGN~~tL~~~p~~~~~r~~L~kF~k~-~Yssn~M~l~i~G~eslD~Le~lv~~~F~~i~N~~~~~p~-----f~~~p-~ 255 (974)
T KOG0959|consen 183 STGNKKTLLEGPREIDLRDELLKFYKN-WYSSNIMTLVIVGKESLDVLESLVTRLFDEISNKKKPRPV-----FPEPP-F 255 (974)
T ss_pred cccchhhhhhccccchHHHHHHHHHHh-hcccccceEEEEcCCChhHHHHHHHHHcccccccCCCCCc-----ccCCC-C
Confidence 6 678888777 8999999996 8899999999999999999999999999999887666532 22221 1
Q ss_pred CCCccceeEEeCCCCCcceEEEEEeeccCCCCcc--hHhHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeeeeeccCCCCC
Q 001831 754 FPSSIIREVVRSPMVEAQCSVQLCFPVELKNGTM--VEEINYVGFLSKLLETKMMQVLRFKHGQIYSASVSVFLGGNKHS 831 (1008)
Q Consensus 754 ~p~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~--~~~~~~~~~L~~~l~s~L~~~lRe~~gl~Y~~~~~~~~~~~~~~ 831 (1008)
.+......+...+ ......+.+.|+.+-....| .....+..++|.--.+-|...|| ++||+-+..++.....
T Consensus 256 ~~e~~~~~~~v~p-ik~~~~l~is~~~p~~~~~y~~kP~~y~~hLigheg~GSL~~~Lk-~~gw~~sl~a~~~~~a---- 329 (974)
T KOG0959|consen 256 LPEELKKLVRVVP-IKDGRSLMISWPVPPLNHHYKSKPLRYLSHLIGHEGPGSLLSYLK-RLGWATSLEAGIPEFA---- 329 (974)
T ss_pred ChHHhCcEEEEEe-ccccceEEEEEecCCcccccccCcHHHHHHHhccCCcchHHHHHH-HhhchheeecCCCccc----
Confidence 2211122222222 23456677778875322112 12233444555533555778887 5799988877765211
Q ss_pred CCCCcceeEEEEEEeC---cccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH--HHHHhhccchHHHHHHHHHhhcc
Q 001831 832 RTGDVRGDISINFSCD---PEISFKLVDLALDEISRLQKEGPSDEDVSTILELEQ--RAHETGLQENYHWLDRILCSYQS 906 (1008)
Q Consensus 832 ~~~~~~g~~~i~~~~~---~~~~~~~~~~~~~~l~~i~~~~is~~el~~ak~~~~--~~~~~~~~~~~~~~~~l~~~~~~ 906 (1008)
.+.+.|.|.+... -+++++++..+...+.-++..+.-..-+++....-. ..+... +.+...+..+.....
T Consensus 330 ---s~~~~f~v~idLtd~G~e~~~~ii~~~f~yi~~l~~~~~~~~i~~E~~~~~~~~Frf~~k-~~p~~~~~~~~~nlq- 404 (974)
T KOG0959|consen 330 ---SGYSFFNVSIDLTDEGLEHVDEIIGLVFNYIKLLQSAGPEKWIFKELQLISEVKFRFQDK-EPPMEYASEIASNLQ- 404 (974)
T ss_pred ---cccceEEEEEEeccccchhHHHHHHHHHHHHHHHHhcCchhHHHHHHHHhhhhheeeccc-CCcHHHHHHHHhhcc-
Confidence 1466777777653 358899999999999988776655444444433222 222222 233333333333221
Q ss_pred ccccCCCCcchhhchhhHHHHHhcCCHHHHHHHHHHhcCCCCCCceEEEEEe
Q 001831 907 RVYSGDVGTSFKIQDEARSKVRKSLQPLTLQLALQRIMPYPCNKQFTVVILM 958 (1008)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~i~~vT~edi~~~a~~~l~~~~~~~~~~~i~~ 958 (1008)
....... -.....+....++.|+.+... |.| .++.++++.
T Consensus 405 ---~~P~~~i-----l~~~~ll~~~~p~~i~~~~~~-L~p---~n~~v~~~s 444 (974)
T KOG0959|consen 405 ---YYPVEDV-----LTGSYLLTEFDPDLIQEVLSS-LVP---SNMRVILVS 444 (974)
T ss_pred ---cCChHHh-----hcchhhhhhcChHHHHHHHHh-cCc---ccceeeeee
Confidence 1112211 122345666777777777744 566 677665554
No 21
>COG1026 Predicted Zn-dependent peptidases, insulinase-like [General function prediction only]
Probab=99.89 E-value=7.1e-21 Score=215.97 Aligned_cols=411 Identities=13% Similarity=0.069 Sum_probs=292.8
Q ss_pred CCcEEEEEecCCCCCeEEEEEEecCcCCCCCcchhhhhchhHHHhhhcCCCCCCHHH-HHHHHcC-ceEEEEEEecceeE
Q 001831 531 NGMRVCYKCTDFLDDQVLFTGFSYGGLSELPESEYLSCSMGSTIAGEIGVFGYRPSM-LMDMLAG-KRVEGGTKVGAYMR 608 (1008)
Q Consensus 531 NGl~v~~~~~~~~~~~v~~~~~~~gg~~~~~~~~g~~~~l~~~l~~~~g~~~~~~~~-l~~~l~~-~g~~~~~~~~~~~~ 608 (1008)
+|+++....++......+ +.+ .-.+.+..|++|.++|+++ +|+.+|+-.+ +...+.+ .+.-+||.|..|+|
T Consensus 29 TGa~l~hi~~~d~~~vFs--i~F---~T~p~dstGVaHiLEHtvl--cGS~kYPvkdPF~~ml~rSLntF~NA~T~~D~T 101 (978)
T COG1026 29 TGAELAHIKNEDPNNVFS--IAF---KTEPHDSTGVAHILEHTVL--CGSKKYPVKDPFFKMLKRSLNTFLNAFTFPDKT 101 (978)
T ss_pred CCceEEEecCCCcCceEE--EEe---ecCCCCCCCcchHHHHHhh--hCCCCCCCCChHHHHHHHhHHHHHhhccCCCcc
Confidence 799999998875444333 333 2344568999999999999 8999999888 4444444 33449999999999
Q ss_pred EEEEec-ChhhHHHHHHHHHHHhccCCCCCHHHHHHH--------------HHHHHHHHHHhhcChHHHHHHHHHHHhcC
Q 001831 609 TFSGDC-SPSDLETALQLVYQLFTTNVAPGEEEVEIV--------------MQMAEEVIRAQERDPYTAFANRVKEINYG 673 (1008)
Q Consensus 609 ~~~~~~-~~~~l~~~l~ll~~~l~~p~~~~~~~~~~~--------------k~~~~~e~~~~~~~p~~~~~~~~~~~~~~ 673 (1008)
.|-+++ ..+++-.+|.+..|.+.+|.. +++.|.++ ++++..||+....++..++++.+.+.+|+
T Consensus 102 ~YP~sS~~~~Df~NLl~VYlDavf~PlL-~~e~F~QEgwr~e~~~~~~l~~~GVVyNEMKGa~ss~~~~~~~~~~~slfp 180 (978)
T COG1026 102 VYPASSANEKDFYNLLSVYLDAVFHPLL-TKESFLQEGWRIEFKDESNLKYKGVVYNEMKGAYSSGESVLSRAMQQSLFP 180 (978)
T ss_pred eeeccccCcchHHHHHHHHHHhhhCccc-chHHHhhhhhccccCCCccceeeeEEeehhcccccCchhHHHHHHHHhhCC
Confidence 998865 557799999999999999977 88888654 56788999999999999999999999999
Q ss_pred CCCcCCCC--ChhhhhcCChhHHHHHHhhhhCCCCCcEEEEEecCCccchHHHHHHh-hccCCCCCCCCCccccCCCCCC
Q 001831 674 NSYFFRPI--RISDLQKVDPLKACDYFNSCFKDPSTFTVVIVGNIDPSNGIPLILQY-LGGIPKPPEPILHFNRDNLKGL 750 (1008)
Q Consensus 674 ~~~~~~~~--~~~~i~~lt~~~l~~~~~~~~~~~~~~~l~i~Gd~~~~~~~~~i~~~-~~~l~~~~~~~~~~~~~~~~~~ 750 (1008)
+..|+... .+.+|..+|.+++++||++ +|.|+|+.+++.||++.++..+.+++. +...+... .. . +++..
T Consensus 181 ~~ty~~~SGG~P~~I~~LtyE~~r~FHkk-~Y~pSN~~i~~yGni~~~~~L~~iee~~l~~~~k~~-~~--~---~i~~~ 253 (978)
T COG1026 181 GTTYGVNSGGDPKNIPDLTYEEFRAFHKK-HYHPSNCKIFVYGNIPTERLLDFIEEKVLRPFGKRE-LD--V---PIPDQ 253 (978)
T ss_pred CccccccCCCCcccccccCHHHHHHHHHH-hCCccceEEEEECCCCHHHHHHHHHHhhhccccccc-cC--C---CCCcc
Confidence 98888665 8999999999999999997 778999999999999999999999877 54444332 11 1 11111
Q ss_pred C-cCCCCccceeEEeC--CCCCcceEEEEEeeccCCCCcchHhHHHHHHHHHHH----HHHHHHHHhhhcCCe-eeeeee
Q 001831 751 P-FTFPSSIIREVVRS--PMVEAQCSVQLCFPVELKNGTMVEEINYVGFLSKLL----ETKMMQVLRFKHGQI-YSASVS 822 (1008)
Q Consensus 751 ~-~~~p~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~L~~~l----~s~L~~~lRe~~gl~-Y~~~~~ 822 (1008)
+ +..|.......-.. ..+..+..+.+.|-++... .....+++.+|..++ .+.|.+.|-| .|+. +.+...
T Consensus 254 ~~~~~~~~~~~~ypi~~~~~de~q~~~~lsWl~~~~~--d~~~~lal~vL~~iLl~~~asPl~~~lie-sglg~~~~~g~ 330 (978)
T COG1026 254 KAFKKPRRKVLEYPISFDEEDEDQGLLSLSWLGGSAS--DAEDSLALEVLEEILLDSAASPLTQALIE-SGLGFADVSGS 330 (978)
T ss_pred cccCcccccceeeccCCCCCCCceeEEEEEEecCCcc--cHHHHHHHHHHHHHHccCcccHHHHHHHH-cCCCcccccce
Confidence 1 22222221111111 1234566666667774332 134456677777766 7789999975 5777 333222
Q ss_pred eeccCCCCCCCCCcceeEEEEEE-eCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccchHHHHHHHH
Q 001831 823 VFLGGNKHSRTGDVRGDISINFS-CDPEISFKLVDLALDEISRLQKEGPSDEDVSTILELEQRAHETGLQENYHWLDRIL 901 (1008)
Q Consensus 823 ~~~~~~~~~~~~~~~g~~~i~~~-~~~~~~~~~~~~~~~~l~~i~~~~is~~el~~ak~~~~~~~~~~~~~~~~~~~~l~ 901 (1008)
....- ....|.+.+. +..+++++.-+.+...|+++.+.||+.+.++.++..+.-++... .+..+....+.
T Consensus 331 ~~~~~--------~~~~f~v~~~gv~~ek~~~~k~lV~~~L~~l~~~gi~~~~ie~~~~q~E~s~ke~-~s~pfgl~l~~ 401 (978)
T COG1026 331 YDSDL--------KETIFSVGLKGVSEEKIAKLKNLVLSTLKELVKNGIDKKLIEAILHQLEFSLKEV-KSYPFGLGLMF 401 (978)
T ss_pred ecccc--------ceeEEEEEecCCCHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhhh-cCCCccHHHHH
Confidence 22111 3456666664 57789999999999999999999999999999987766555543 22223333444
Q ss_pred HhhccccccCCCCcchhhchhhHHHHHhcCCHHH--HHHHHHHhcCCCCCCc-eEEEEEecCchhhHHHHhhhcc
Q 001831 902 CSYQSRVYSGDVGTSFKIQDEARSKVRKSLQPLT--LQLALQRIMPYPCNKQ-FTVVILMPQVSRFKFLRSLFRH 973 (1008)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vT~ed--i~~~a~~~l~~~~~~~-~~~~i~~p~~~~~~~l~~~~~~ 973 (1008)
.....++.++++....++ ..+.+.|+.--.++ +.++.++||-. ++ ++++++.|...+.+.+++-.+.
T Consensus 402 ~~~~gw~~G~dp~~~Lr~--~~~~~~Lr~~le~~~~fe~LI~ky~l~---N~h~~~v~~~Ps~~~~~~~ekee~e 471 (978)
T COG1026 402 RSLYGWLNGGDPEDSLRF--LDYLQNLREKLEKGPYFEKLIRKYFLD---NPHYVTVIVLPSPELEEKLEKEERE 471 (978)
T ss_pred HhccccccCCChhhhhhh--HHHHHHHHHhhhcChHHHHHHHHHhhc---CCccEEEEEecChHHHHHHHHHHHH
Confidence 444444455576655443 55555565544455 99999999966 45 8999999999888887774443
No 22
>PF00675 Peptidase_M16: Insulinase (Peptidase family M16) This is family M16 in the peptidase classification. ; InterPro: IPR011765 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. The majority of the sequences in this entry are metallopeptidases and non-peptidase homologs belong to MEROPS peptidase family M16 (clan ME), subfamilies M16A, M16B and M16C; they include: Insulinase, insulin-degrading enzyme (3.4.24.56 from EC) Mitochondrial processing peptidase alpha subunit, (Alpha-MPP, 3.4.24.64 from EC) Pitrlysin, Protease III precursor (3.4.24.55 from EC) Nardilysin, (3.4.24.61 from EC) Ubiquinol-cytochrome C reductase complex core protein I,mitochondrial precursor (1.10.2.2 from EC) Coenzyme PQQ synthesis protein F (3.4.99 from EC) These proteins do not share many regions of sequence similarity; the most noticeable is in the N-terminal section. This region includes a conserved histidine followed, two residues later by a glutamate and another histidine. In pitrilysin, it has been shown [] that this H-x-x-E-H motif is involved in enzymatic activity; the two histidines bind zinc and the glutamate is necessary for catalytic activity. The proteins classified as non-peptidase homologues either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. ; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 3P7L_A 3P7O_A 3TUV_A 3GO9_A 1BE3_B 1PP9_B 2A06_B 1SQB_B 1SQP_B 1L0N_B ....
Probab=99.87 E-value=5.8e-22 Score=188.90 Aligned_cols=147 Identities=28% Similarity=0.419 Sum_probs=133.5
Q ss_pred EEEEeecCCCCceEEEEEEEcccCCCCCCCCCChhHHHHHHccCCCCCCChhhHHHHHHHcccccCCCccccccCCeEEE
Q 001831 48 FYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDIIKFLESIGAEFGACQNAVTSADETVY 127 (1008)
Q Consensus 48 ~v~~~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ahllehl~f~gs~~~~~~~~~~~l~~~g~~~g~~~na~T~~d~t~y 127 (1008)
+|++.+++... .+++.++|++|+++|++++.|++|+++||+|+||.+++..++.+.++++|+.+ |++|+.|+|.|
T Consensus 1 ~V~~~~~~~~~-~~~~~l~~~~Gs~~e~~~~~G~a~ll~~l~~~gs~~~~~~~l~~~l~~~G~~~----~~~t~~d~t~~ 75 (149)
T PF00675_consen 1 KVVLVEDPGSP-VVSVSLVFKAGSRYEPPGKPGLAHLLEHLLFRGSKKYSSDELQEELESLGASF----NASTSRDSTSY 75 (149)
T ss_dssp EEEEEESTTSS-EEEEEEEES-SGGGSCTTTTTHHHHHHHHTTSBBSSSBHHHHHHHHHHTTCEE----EEEEESSEEEE
T ss_pred CEEEEEcCCCC-EEEEEEEEeeccCCCCCCCCchhhhhhhhcccccchhhhhhhHHHhhhhcccc----ceEecccceEE
Confidence 57888886544 79999999999999999999999999999999999999999999999998775 99999999999
Q ss_pred EEECCCCCHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHhcCCCch-hhhHHHHHHHHhcCCCCCccCCCCC
Q 001831 128 ELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEKERGAVLEEYRGNRNAS-GRMQDAHWVLMMEGSKYAECLPIGL 203 (1008)
Q Consensus 128 ~~~~~~~~~~~l~~~l~~l~d~~~~p~~~~~~~~~er~~v~~e~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~g~ 203 (1008)
.+++++++ ++.+|++|++++.+|.|++++|+++|..+..|++....++ ..+.+.+.+.+|.+|||+ ++..|+
T Consensus 76 ~~~~~~~~---~~~~l~~l~~~~~~P~f~~~~~~~~r~~~~~ei~~~~~~~~~~~~~~l~~~~f~~~p~~-~~~~~~ 148 (149)
T PF00675_consen 76 SASVLSED---LEKALELLADMLFNPSFDEEEFEREREQILQEIEEIKENPQELAFEKLHSAAFRGHPYG-NPLLGP 148 (149)
T ss_dssp EEEEEGGG---HHHHHHHHHHHHHSBGGCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTSGGG-SHSS-T
T ss_pred EEEEeccc---chhHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHhccCCCC-CCCCCC
Confidence 99999654 9999999999999999999999999999999999887665 567999999999999999 888775
No 23
>PF05193 Peptidase_M16_C: Peptidase M16 inactive domain; InterPro: IPR007863 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. These metallopeptidases belong to MEROPS peptidase family M16 (clan ME). They include proteins, which are classified as non-peptidase homologues either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. The peptidases in this group of sequences include: Insulinase, insulin-degrading enzyme (3.4.24.56 from EC) Mitochondrial processing peptidase alpha subunit, (Alpha-MPP, 3.4.24.64 from EC) Pitrlysin, Protease III precursor (3.4.24.55 from EC) Nardilysin, (3.4.24.61 from EC) Ubiquinol-cytochrome C reductase complex core protein I,mitochondrial precursor (1.10.2.2 from EC) Coenzyme PQQ synthesis protein F (3.4.99 from EC) These proteins do not share many regions of sequence similarity; the most noticeable is in the N-terminal section. This region includes a conserved histidine followed, two residues later by a glutamate and another histidine. In pitrilysin, it has been shown [] that this H-x-x-E-H motif is involved in enzymatic activity; the two histidines bind zinc and the glutamate is necessary for catalytic activity. The mitochondrial processing peptidase consists of two structurally related domains. One is the active peptidase whereas the other, the C-terminal region, is inactive. The two domains hold the substrate like a clamp [].; GO: 0004222 metalloendopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 1BE3_B 1PP9_B 2A06_B 1SQB_B 1SQP_B 1L0N_B 1SQX_B 1NU1_B 1L0L_B 2FYU_B ....
Probab=99.86 E-value=5.3e-21 Score=191.25 Aligned_cols=181 Identities=25% Similarity=0.368 Sum_probs=147.0
Q ss_pred CCCHHHHHHHHHhcccCCCcEEEEEccCCCHHHHHHHHHHhhcCCCCCC---CCCCCCCCCCCCCCCCceEEEecCCCCc
Q 001831 209 TVSSDTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSAT---DPPVIPKFPVPSHQEPRFSCFIESEAGG 285 (1008)
Q Consensus 209 ~it~~~l~~f~~~~y~p~n~~l~i~Gdi~d~~~~~~~i~~~f~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (1008)
++|.++|++||++||+|+||+|+++||+ +++++.++|+++|+.++... .+........+.............+..+
T Consensus 1 ~it~e~l~~f~~~~y~p~n~~l~i~Gd~-~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (184)
T PF05193_consen 1 NITLEDLRAFYKKFYRPSNMTLVIVGDI-DPDELEKLIEKYFGSLPKSSIPPKPKPRSPPLPPSEPQGKEIVIPSKDESQ 79 (184)
T ss_dssp C--HHHHHHHHHHHSSGGGEEEEEEESS-GHHHHHHHHHHHHTTSSHSCHGGSSSCSSSSSSCGGSSEEEEEEEESSSSS
T ss_pred CCCHHHHHHHHHHhcCccceEEEEEcCc-cHHHHHHHHHhhhhhhccccccccccccccccccccccccccccccccccc
Confidence 5799999999999999999999999999 99999999999999998754 1111111111111122222333333478
Q ss_pred eEEEEEEEcCCCcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeeeeeeccCcccccccEEEEEEEecCCcHHHHH
Q 001831 286 SAVIVSYKMPVNELKTIKDYKEMLTESMFLHALNQRFFKLSRRKDPPYFSCSASADDLVRPLKAYIMSSSCKERGTLKAL 365 (1008)
Q Consensus 286 ~~v~l~~~~p~~~~~~~~~~~~~~l~~il~~~~~srL~~~lr~~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 365 (1008)
+.+.++|..++. .+.++..++.++..+|++.+.++|+..+|++.+++|++.++...+ .+.++|.+.+.+.+++.++++
T Consensus 80 ~~v~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~s~l~~~lr~~~~l~y~v~~~~~~~-~~~~~~~i~~~~~~~~~~~~~ 157 (184)
T PF05193_consen 80 SIVSIAFPGPPI-KDSKDYFALNLLSSLLGNGMSSRLFQELREKQGLAYSVSASNSSY-RDSGLFSISFQVTPENLDEAI 157 (184)
T ss_dssp EEEEEEEEEEET-GTSTTHHHHHHHHHHHHCSTTSHHHHHHHTTTTSESEEEEEEEEE-SSEEEEEEEEEEEGGGHHHHH
T ss_pred cccccccccccc-cccchhhHHHHHHHHHhcCccchhHHHHHhccccceEEEeeeecc-ccceEEEEEEEcCcccHHHHH
Confidence 999999998875 257889999999999999999999999999999999999996544 688999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 001831 366 ESMLIEVARVRLHGFSEREVSVARALL 392 (1008)
Q Consensus 366 ~~i~~~l~~l~~~g~s~~el~~ak~~l 392 (1008)
+.+.+++++++++|++++||+++|++|
T Consensus 158 ~~~~~~l~~l~~~~~s~~el~~~k~~L 184 (184)
T PF05193_consen 158 EAILQELKRLREGGISEEELERAKNQL 184 (184)
T ss_dssp HHHHHHHHHHHHHCS-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHhcC
Confidence 999999999999999999999999875
No 24
>KOG2583 consensus Ubiquinol cytochrome c reductase, subunit QCR2 [Energy production and conversion]
Probab=99.83 E-value=1.8e-17 Score=167.55 Aligned_cols=388 Identities=12% Similarity=0.056 Sum_probs=269.4
Q ss_pred EEEecCCcEEEEEecCCCCCeEEEEEEecCcCCCCCcchhhhhchhHHHhhhcCCCCCCHHHHHHHHcCceEEEEEEecc
Q 001831 526 ELVLSNGMRVCYKCTDFLDDQVLFTGFSYGGLSELPESEYLSCSMGSTIAGEIGVFGYRPSMLMDMLAGKRVEGGTKVGA 605 (1008)
Q Consensus 526 ~~~L~NGl~v~~~~~~~~~~~v~~~~~~~gg~~~~~~~~g~~~~l~~~l~~~~g~~~~~~~~l~~~l~~~g~~~~~~~~~ 605 (1008)
..+|.||++|...+.+.....+.+ .+..|++++..++.|++|++....+ ..+.+++...+.+.++..|+.++..+++
T Consensus 25 ~~kl~ngL~Vas~e~~~~is~l~l-~~~AGSRYe~~~~~G~sHllr~f~g--~~Tq~~sal~ivr~se~~GG~Lss~~tR 101 (429)
T KOG2583|consen 25 TTKLVNGLTVASREAPTAISSLSL-AFRAGSRYEPADQQGLSHLLRNFVG--RDTQERSALKIVRESEQLGGTLSSTATR 101 (429)
T ss_pred hhccccceEEEeccCCCcceEEEE-EEecCccCCccccccHHHHHHHhcc--cCccccchhhhhhhhHhhCceeeeeeec
Confidence 348899999999988754443333 2666788877788999999987776 6899999999999999999999999999
Q ss_pred eeEEEEEecChhhHHHHHHHHHHHhccCCCCCHHHHHHHH-HHHHHHHHHhhcChHHHHHHHHHHHhcCCCCcCCCC--C
Q 001831 606 YMRTFSGDCSPSDLETALQLVYQLFTTNVAPGEEEVEIVM-QMAEEVIRAQERDPYTAFANRVKEINYGNSYFFRPI--R 682 (1008)
Q Consensus 606 ~~~~~~~~~~~~~l~~~l~ll~~~l~~p~~~~~~~~~~~k-~~~~~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~--~ 682 (1008)
+.+.++.+++.++++-.|.+|.+++..|.| -+-+++... ..+..+ ....+|...+.+.+++..|.+ .++.++ .
T Consensus 102 e~~~~tvt~lrd~~~~~l~~L~~V~~~paF-kPwEl~D~~~~ti~~~--l~~~t~~~~a~e~lH~aAfRn-gLgnslY~p 177 (429)
T KOG2583|consen 102 ELIGLTVTFLRDDLEYYLSLLGDVLDAPAF-KPWELEDVVLATIDAD--LAYQTPYTIAIEQLHAAAFRN-GLGNSLYSP 177 (429)
T ss_pred ceEEEEEEEecccHHHHHHHHHHhhcccCc-CchhhhhhhhhhhHHH--hhhcChHHHHHHHHHHHHHhc-ccCCcccCC
Confidence 999999999999999999999999999999 788888777 444443 447789999999999999977 566666 3
Q ss_pred hhhhhcCChhHHHHHHhhhhCCCCCcEEEEEecCCccchHHHHHHhhccCCCCCCCCCccccCCCCCCCcCCCCccceeE
Q 001831 683 ISDLQKVDPLKACDYFNSCFKDPSTFTVVIVGNIDPSNGIPLILQYLGGIPKPPEPILHFNRDNLKGLPFTFPSSIIREV 762 (1008)
Q Consensus 683 ~~~i~~lt~~~l~~~~~~~~~~~~~~~l~i~Gd~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 762 (1008)
.-.+.+++.++|.+|..++|. ..|+.++-+| +|++.+....++++ .++.+... .+.+..+..+.
T Consensus 178 ~~~vg~vss~eL~~Fa~k~fv-~gn~~lvg~n-vd~~~L~~~~~~~~-~~~~~~~~---------k~a~a~~~gGe---- 241 (429)
T KOG2583|consen 178 GYQVGSVSSSELKDFAAKHFV-KGNAVLVGVN-VDHDDLKQFADEYA-PIRDGLPL---------KPAPAKYSGGE---- 241 (429)
T ss_pred cccccCccHHHHHHHHHHHhh-ccceEEEecC-CChHHHHHHHHHhc-cccCCCCC---------CCCCccccCCc----
Confidence 347999999999999998775 6888776664 78899999999883 33322111 11122222222
Q ss_pred EeCCCCCcceEEEEEeecc-CCC-CcchHhHHHHHHHHHHHH----HHHHHHHhhhcCCeeeeeeeeeccCCCCCCCCCc
Q 001831 763 VRSPMVEAQCSVQLCFPVE-LKN-GTMVEEINYVGFLSKLLE----TKMMQVLRFKHGQIYSASVSVFLGGNKHSRTGDV 836 (1008)
Q Consensus 763 ~~~~~~~~~~~v~~~~~~~-~~~-~~~~~~~~~~~~L~~~l~----s~L~~~lRe~~gl~Y~~~~~~~~~~~~~~~~~~~ 836 (1008)
.+.....+..+|.+.-.+. ..+ +......++..+|+.... .-++.++--. -+-|++.++..... |. +
T Consensus 242 ~Rk~~~g~~~~v~vagegAAa~~~k~~~a~av~~~~Lg~~~~~k~~t~~~~~aa~~-a~~~~~s~sA~~a~-----ys-D 314 (429)
T KOG2583|consen 242 ARKDARGNRVHVAVAGEGAAAGNLKVLAAQAVLLAALGNSAPVKRGTGLLSEAAGA-AGEQGASASAFNAP-----YS-D 314 (429)
T ss_pred cccccCCceeEEEEecCcccccchHHHHHHHHHHHHHhcccccccccchHHHHHhh-ccccCceeeeeccc-----cc-C
Confidence 2222223455555544442 221 121222334445554431 2233444322 23355555444222 33 7
Q ss_pred ceeEEEEEEeCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccchHHHHHHHHHhhccccccCCCCcc
Q 001831 837 RGDISINFSCDPEISFKLVDLALDEISRLQKEGPSDEDVSTILELEQRAHETGLQENYHWLDRILCSYQSRVYSGDVGTS 916 (1008)
Q Consensus 837 ~g~~~i~~~~~~~~~~~~~~~~~~~l~~i~~~~is~~el~~ak~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 916 (1008)
.|.|++++..+..++.+++......+...+..+++-.....+++.+........+... ......+ .+ .. .
T Consensus 315 sGL~gv~~~~~~~~a~~~v~s~v~~lks~~~~~id~~~~~a~~~~l~~~~~ss~~a~~---~~~~~~a--~~-~~---~- 384 (429)
T KOG2583|consen 315 SGLFGVYVSAQGSQAGKVVSSEVKKLKSALVSDIDNAKVKAAIKALKASYLSSVEALE---LATGSQA--NL-VS---E- 384 (429)
T ss_pred CceEEEEEEecCccHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhhcchHHHH---HhhHHHh--cC-CC---C-
Confidence 9999999998888899999999999998888888887777777766665554332211 1111111 01 11 1
Q ss_pred hhhchhhHHHHHhcCCHHHHHHHHHHhcCCCCCCceEEEEEecCc
Q 001831 917 FKIQDEARSKVRKSLQPLTLQLALQRIMPYPCNKQFTVVILMPQV 961 (1008)
Q Consensus 917 ~~~~~~~~~~~i~~vT~edi~~~a~~~l~~~~~~~~~~~i~~p~~ 961 (1008)
...+.+.|++||..||++++++++.. +..++-+|.-.
T Consensus 385 ----~d~~i~~id~Vt~sdV~~a~kk~~s~----kls~aA~Gnl~ 421 (429)
T KOG2583|consen 385 ----PDAFIQQIDKVTASDVQKAAKKFLSG----KLSLAAYGNLS 421 (429)
T ss_pred ----hHHHHHHhccccHHHHHHHHHHhccC----cceeeeecccc
Confidence 26779999999999999999999864 66777777644
No 25
>PF05193 Peptidase_M16_C: Peptidase M16 inactive domain; InterPro: IPR007863 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. These metallopeptidases belong to MEROPS peptidase family M16 (clan ME). They include proteins, which are classified as non-peptidase homologues either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. The peptidases in this group of sequences include: Insulinase, insulin-degrading enzyme (3.4.24.56 from EC) Mitochondrial processing peptidase alpha subunit, (Alpha-MPP, 3.4.24.64 from EC) Pitrlysin, Protease III precursor (3.4.24.55 from EC) Nardilysin, (3.4.24.61 from EC) Ubiquinol-cytochrome C reductase complex core protein I,mitochondrial precursor (1.10.2.2 from EC) Coenzyme PQQ synthesis protein F (3.4.99 from EC) These proteins do not share many regions of sequence similarity; the most noticeable is in the N-terminal section. This region includes a conserved histidine followed, two residues later by a glutamate and another histidine. In pitrilysin, it has been shown [] that this H-x-x-E-H motif is involved in enzymatic activity; the two histidines bind zinc and the glutamate is necessary for catalytic activity. The mitochondrial processing peptidase consists of two structurally related domains. One is the active peptidase whereas the other, the C-terminal region, is inactive. The two domains hold the substrate like a clamp [].; GO: 0004222 metalloendopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 1BE3_B 1PP9_B 2A06_B 1SQB_B 1SQP_B 1L0N_B 1SQX_B 1NU1_B 1L0L_B 2FYU_B ....
Probab=99.79 E-value=1.6e-18 Score=173.17 Aligned_cols=179 Identities=27% Similarity=0.383 Sum_probs=137.6
Q ss_pred cCChhHHHHHHhhhhCCCCCcEEEEEecCCccchHHHHHHhhccCCCCCC---CCCccccCCCCCCCcCCCCccceeEEe
Q 001831 688 KVDPLKACDYFNSCFKDPSTFTVVIVGNIDPSNGIPLILQYLGGIPKPPE---PILHFNRDNLKGLPFTFPSSIIREVVR 764 (1008)
Q Consensus 688 ~lt~~~l~~~~~~~~~~~~~~~l~i~Gd~~~~~~~~~i~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~p~~~~~~~~~ 764 (1008)
+||.++|++||++ ||.|.||+++|+||++++++.+.++++|+.|+.... .. ...............++.
T Consensus 1 ~it~e~l~~f~~~-~y~p~n~~l~i~Gd~~~~~~~~~i~~~~~~l~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~ 72 (184)
T PF05193_consen 1 NITLEDLRAFYKK-FYRPSNMTLVIVGDIDPDELEKLIEKYFGSLPKSSIPPKPK-------PRSPPLPPSEPQGKEIVI 72 (184)
T ss_dssp C--HHHHHHHHHH-HSSGGGEEEEEEESSGHHHHHHHHHHHHTTSSHSCHGGSSS-------CSSSSSSCGGSSEEEEEE
T ss_pred CCCHHHHHHHHHH-hcCccceEEEEEcCccHHHHHHHHHhhhhhhcccccccccc-------cccccccccccccccccc
Confidence 5799999999996 889999999999999999999999999999997641 11 011111111122223333
Q ss_pred CCCCCcceEEEEEeecc-C-CCCcchHhHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeeeeeccCCCCCCCCCcceeEEE
Q 001831 765 SPMVEAQCSVQLCFPVE-L-KNGTMVEEINYVGFLSKLLETKMMQVLRFKHGQIYSASVSVFLGGNKHSRTGDVRGDISI 842 (1008)
Q Consensus 765 ~~~~~~~~~v~~~~~~~-~-~~~~~~~~~~~~~~L~~~l~s~L~~~lRe~~gl~Y~~~~~~~~~~~~~~~~~~~~g~~~i 842 (1008)
.....+...+.++|+++ . .+.+.....++..+|++.++++|+..||++.|++|+++++..... +.|.|.+
T Consensus 73 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~s~l~~~lr~~~~l~y~v~~~~~~~~--------~~~~~~i 144 (184)
T PF05193_consen 73 PSKDESQSIVSIAFPGPPIKDSKDYFALNLLSSLLGNGMSSRLFQELREKQGLAYSVSASNSSYR--------DSGLFSI 144 (184)
T ss_dssp EESSSSSEEEEEEEEEEETGTSTTHHHHHHHHHHHHCSTTSHHHHHHHTTTTSESEEEEEEEEES--------SEEEEEE
T ss_pred ccccccccccccccccccccccchhhHHHHHHHHHhcCccchhHHHHHhccccceEEEeeeeccc--------cceEEEE
Confidence 33333788899999984 3 345555555666777777788899999999999999999966433 5789999
Q ss_pred EEEeCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 001831 843 NFSCDPEISFKLVDLALDEISRLQKEGPSDEDVSTILELE 882 (1008)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~l~~i~~~~is~~el~~ak~~~ 882 (1008)
++.+.+++.+++++.+.+++++++++||+++||+++|+.+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~s~~el~~~k~~L 184 (184)
T PF05193_consen 145 SFQVTPENLDEAIEAILQELKRLREGGISEEELERAKNQL 184 (184)
T ss_dssp EEEEEGGGHHHHHHHHHHHHHHHHHHCS-HHHHHHHHHHH
T ss_pred EEEcCcccHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999864
No 26
>KOG2019 consensus Metalloendoprotease HMP1 (insulinase superfamily) [General function prediction only; Posttranslational modification, protein turnover, chaperones]
Probab=99.78 E-value=1.2e-16 Score=170.89 Aligned_cols=428 Identities=13% Similarity=0.076 Sum_probs=287.2
Q ss_pred CCcEEEEEecCCCCCeEEEEEEecCcCCCCCcchhhhhchhHHHhhhcCCCCCCHHH-HHHHHcC-ceEEEEEEecceeE
Q 001831 531 NGMRVCYKCTDFLDDQVLFTGFSYGGLSELPESEYLSCSMGSTIAGEIGVFGYRPSM-LMDMLAG-KRVEGGTKVGAYMR 608 (1008)
Q Consensus 531 NGl~v~~~~~~~~~~~v~~~~~~~gg~~~~~~~~g~~~~l~~~l~~~~g~~~~~~~~-l~~~l~~-~g~~~~~~~~~~~~ 608 (1008)
-|.+++.......++.+++. + +-..++..|+.|.++|.++ +|+.+|+-.+ +.+.|.+ ...-+|++|..|++
T Consensus 61 Tgae~lhl~reD~N~vFsI~-F----rTpp~dstGiPHILEHtvL--CGS~KYPvrdPFfkmLnrSLatFmNAfT~pD~T 133 (998)
T KOG2019|consen 61 TGAEVLHLDREDENNVFSIV-F----RTPPKDSTGIPHILEHTVL--CGSRKYPVRDPFFKMLNRSLATFMNAFTAPDYT 133 (998)
T ss_pred CCceeEeeccCCCCceeEEE-e----ecCCCccCCCchhhhhhee--eccCcCcccChHHHHHHHHHHHHHhhccCCCcc
Confidence 58999888776655533332 2 2234468899999999999 9999998776 6666664 34468999999999
Q ss_pred EEEEec-ChhhHHHHHHHHHHHhccCCCCCHHHHHH------------------HHHHHHHHHHHhhcChHHHHHHHHHH
Q 001831 609 TFSGDC-SPSDLETALQLVYQLFTTNVAPGEEEVEI------------------VMQMAEEVIRAQERDPYTAFANRVKE 669 (1008)
Q Consensus 609 ~~~~~~-~~~~l~~~l~ll~~~l~~p~~~~~~~~~~------------------~k~~~~~e~~~~~~~p~~~~~~~~~~ 669 (1008)
.|-+++ .++++..+.++..+....|.. .+..|.+ .++++..|++...++|.+++...+.+
T Consensus 134 ~yPfattN~kDf~NL~dVYLDAtffPkl-r~~dF~QEGWr~Eh~dpsd~~SpivfkGVVfNEMKG~~S~~~~if~~~~Qq 212 (998)
T KOG2019|consen 134 FYPFATTNTKDFYNLRDVYLDATFFPKL-RKLDFQQEGWRLEHNDPSDPISPIVFKGVVFNEMKGQYSDPDYIFGMLFQQ 212 (998)
T ss_pred eeecccCChHHHHHHHHHhhhcccchHH-HhhhhhhhcceeecCCCCCCcccceeeeeeeecccccccChhHHHHHHHHH
Confidence 998754 667899999999998888876 4555544 46788999999999999999999999
Q ss_pred HhcCCCCcCCCC--ChhhhhcCChhHHHHHHhhhhCCCCCcEEEEEecCCccchHHHHHHhhccCCCCCCCCCccccCCC
Q 001831 670 INYGNSYFFRPI--RISDLQKVDPLKACDYFNSCFKDPSTFTVVIVGNIDPSNGIPLILQYLGGIPKPPEPILHFNRDNL 747 (1008)
Q Consensus 670 ~~~~~~~~~~~~--~~~~i~~lt~~~l~~~~~~~~~~~~~~~l~i~Gd~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~ 747 (1008)
.+|+++.|+... ++-.|..++.+++++||++ +|.|+|+.++-.||++.++...+++.-|.......... .+
T Consensus 213 ~L~p~~tYgv~SGGDPl~IpdLt~eelk~FHr~-~YHPSNAri~tYGn~Pl~~~l~~l~e~~~~~sk~~~s~------kv 285 (998)
T KOG2019|consen 213 ALFPENTYGVNSGGDPLDIPDLTYEELKEFHRQ-HYHPSNARIFTYGNFPLEDLLKQLEEDFSPFSKRELSS------KV 285 (998)
T ss_pred hhCccccccccCCCCcccCccccHHHHHHHHHh-ccCCCcceeEeecCchHHHHHHHHHHhhcccccccccC------cc
Confidence 999999998776 8899999999999999996 88999999999999999998888887776554332211 01
Q ss_pred CC-CCcCCCCccceeEEeC----CC--CCcceEEEEEeeccCCCCcchHhHHHHHHHHHHH----HHHHHHHHhhhcCCe
Q 001831 748 KG-LPFTFPSSIIREVVRS----PM--VEAQCSVQLCFPVELKNGTMVEEINYVGFLSKLL----ETKMMQVLRFKHGQI 816 (1008)
Q Consensus 748 ~~-~~~~~p~~~~~~~~~~----~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~L~~~l----~s~L~~~lRe~~gl~ 816 (1008)
.. ..+..| .+++.. +. ...+..+.+.|-.+.+.. ...+.++.+|+.++ +|.+++.|-|. |+.
T Consensus 286 ~~qk~f~kp----~rvve~~p~d~~~~p~Kq~~~s~s~L~~~p~d--~~etfaL~~L~~Ll~~gpsSp~yk~LiES-GLG 358 (998)
T KOG2019|consen 286 TFQKLFDKP----RRVVEKGPADPGDLPKKQTKCSNSFLSNDPLD--TYETFALKVLSHLLLDGPSSPFYKALIES-GLG 358 (998)
T ss_pred ccccccccC----ceeeeecCCCCCCCccceeEEEEEeecCCchh--HHHHHHHHHHHHHhcCCCccHHHHHHHHc-CCC
Confidence 10 111122 122211 11 234666666666644332 23456677777766 89999999864 655
Q ss_pred --eeeeeeeeccCCCCCCCCCcceeEEEEEEe-CcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccch
Q 001831 817 --YSASVSVFLGGNKHSRTGDVRGDISINFSC-DPEISFKLVDLALDEISRLQKEGPSDEDVSTILELEQRAHETGLQEN 893 (1008)
Q Consensus 817 --Y~~~~~~~~~~~~~~~~~~~~g~~~i~~~~-~~~~~~~~~~~~~~~l~~i~~~~is~~el~~ak~~~~~~~~~~~~~~ 893 (1008)
.++++++. +. . ..+.|+|.... ..++++++.+.+...++++...+|+.+.++.....+--++... +.
T Consensus 359 tEfsvnsG~~--~~-----t-~~~~fsVGLqGvseediekve~lV~~t~~~lae~gfd~drieAil~qiEislk~q--st 428 (998)
T KOG2019|consen 359 TEFSVNSGYE--DT-----T-LQPQFSVGLQGVSEEDIEKVEELVMNTFNKLAETGFDNDRIEAILHQIEISLKHQ--ST 428 (998)
T ss_pred cccccCCCCC--cc-----c-ccceeeeeeccccHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHhhhhhhcc--cc
Confidence 34444433 21 1 45678888865 5678999999999999999999999999988755443333332 22
Q ss_pred HHHHHHHHHhhccccccCCCCcchhh--chhhHHHHHhcCCHHHHHHHHHHhcCCCCCCceEEEEEecCchhhHHHHhh-
Q 001831 894 YHWLDRILCSYQSRVYSGDVGTSFKI--QDEARSKVRKSLQPLTLQLALQRIMPYPCNKQFTVVILMPQVSRFKFLRSL- 970 (1008)
Q Consensus 894 ~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~vT~edi~~~a~~~l~~~~~~~~~~~i~~p~~~~~~~l~~~- 970 (1008)
+.....+......+....|+-....+ .++.+.+++..-+..=++.+.++|+.. +....++-+.|..+..+.++..
T Consensus 429 ~fGL~L~~~i~~~W~~d~DPfE~Lk~~~~L~~lk~~l~ek~~~lfq~lIkkYiln--n~h~~t~smqpd~e~~~~~~~eE 506 (998)
T KOG2019|consen 429 GFGLSLMQSIISKWINDMDPFEPLKFEEQLKKLKQRLAEKSKKLFQPLIKKYILN--NPHCFTFSMQPDPEFAEKLEQEE 506 (998)
T ss_pred chhHHHHHHHhhhhccCCCccchhhhhhHHHHHHHHHhhhchhHHHHHHHHHHhc--CCceEEEEecCCchhhHHHHHHH
Confidence 23222333322223333344333222 145556666666677799999999965 1335566677777554443321
Q ss_pred ---hccCccccchhHHHHHHHhhhH
Q 001831 971 ---FRHNQTYHLGDAKALAAVAGLT 992 (1008)
Q Consensus 971 ---~~~~~~~~~~~~~~~~~~~~~~ 992 (1008)
++.-.++-.+.-.+.+..+|++
T Consensus 507 ~tkL~ek~~alteeD~~ei~k~~~e 531 (998)
T KOG2019|consen 507 ATKLEEKKAALTEEDLAEIAKAGEE 531 (998)
T ss_pred HHHHHHHHhhCCHHHHHHHHHHHHH
Confidence 2222233333345566666665
No 27
>KOG0961 consensus Predicted Zn2+-dependent endopeptidase, insulinase superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=99.75 E-value=5.7e-16 Score=165.58 Aligned_cols=434 Identities=15% Similarity=0.116 Sum_probs=283.4
Q ss_pred CcEEEEEecCCCCCeEEEEEEecCcCCCCCcchhhhhchhHHHhhhcCCCCCCHHHHHHHHcCce-EEEEEEecceeEEE
Q 001831 532 GMRVCYKCTDFLDDQVLFTGFSYGGLSELPESEYLSCSMGSTIAGEIGVFGYRPSMLMDMLAGKR-VEGGTKVGAYMRTF 610 (1008)
Q Consensus 532 Gl~v~~~~~~~~~~~v~~~~~~~gg~~~~~~~~g~~~~l~~~l~~~~g~~~~~~~~l~~~l~~~g-~~~~~~~~~~~~~~ 610 (1008)
|++|.....++. .|+..+.++ -+-....|..|.++|++| +|+++|+.+.+-+.+.++. +..|+-|+.|++.|
T Consensus 29 kl~va~~~~pts--~vhG~f~v~---TEa~~d~G~PHTLEHL~F--MGSKkYP~kGvLd~~anr~l~dtNAwTDtD~T~Y 101 (1022)
T KOG0961|consen 29 KLRVAIGEVPTS--MVHGAFSVV---TEADSDDGLPHTLEHLVF--MGSKKYPFKGVLDVIANRCLADTNAWTDTDHTAY 101 (1022)
T ss_pred ceEEEEeecCCc--ceeeeEEee---eeecCCCCCchhHHHHhh--hccccCCcccHHHHhhcchhcccccccccCcceE
Confidence 788888877643 355544432 233456899999999999 8999999999887777654 47999999999999
Q ss_pred EEec-ChhhHHHHHHHHHHHhccCCCCCHHHHHHH----------HHHHHHHHHHhhcChHHHHHHHHHHHhcCC-CCcC
Q 001831 611 SGDC-SPSDLETALQLVYQLFTTNVAPGEEEVEIV----------MQMAEEVIRAQERDPYTAFANRVKEINYGN-SYFF 678 (1008)
Q Consensus 611 ~~~~-~~~~l~~~l~ll~~~l~~p~~~~~~~~~~~----------k~~~~~e~~~~~~~p~~~~~~~~~~~~~~~-~~~~ 678 (1008)
++++ -.+.+-++|....+-+.+|.. +.++|..+ ++++..|+++..++-..++.+...+.+|+. ++|.
T Consensus 102 tLStag~dGFlklLPvy~dHiL~P~L-tdeaf~TEVyHI~geg~d~GVVySEMq~~es~~~~im~~~~~~~~yP~~sgY~ 180 (1022)
T KOG0961|consen 102 TLSTAGSDGFLKLLPVYIDHILTPML-TDEAFATEVYHITGEGNDAGVVYSEMQDHESEMESIMDRKTKEVIYPPFSGYA 180 (1022)
T ss_pred EeecccccchHHHhHHHHHhhcCccc-chhhhhhheeeecCCCCccceeehhhhhhhcccchhhhhhhheeecCCCCCce
Confidence 9876 445689999999999999988 78888554 578899999888888889999999999984 4554
Q ss_pred CCC--ChhhhhcCChhHHHHHHhhhhCCCCCcEEEEEecCCccchHHHHHHhhccCCCCCCCCC-ccccCCCCC--CCcC
Q 001831 679 RPI--RISDLQKVDPLKACDYFNSCFKDPSTFTVVIVGNIDPSNGIPLILQYLGGIPKPPEPIL-HFNRDNLKG--LPFT 753 (1008)
Q Consensus 679 ~~~--~~~~i~~lt~~~l~~~~~~~~~~~~~~~l~i~Gd~~~~~~~~~i~~~~~~l~~~~~~~~-~~~~~~~~~--~~~~ 753 (1008)
..- ..+.++.+|.+++++||++ +|.+.||.++|+|.++++++....+.+-..|+......+ .++++ +.. .+..
T Consensus 181 ~eTGG~~knLR~lt~ekIR~yHK~-~Y~~sN~cviVcG~v~~d~lL~~m~~~~neile~~s~vP~~~~rP-f~~tn~~~~ 258 (1022)
T KOG0961|consen 181 VETGGRLKNLRELTLEKIRDYHKK-FYHLSNMCVIVCGMVDHDQLLEIMNNVENEILEHMSTVPDHFPRP-FSFTNALSD 258 (1022)
T ss_pred eccCCChhhHHHhhHHHHHHHHHH-hccccceEEEEecCcCHHHHHHHHHHHHhhhhhccccCCCCCCCC-cccccCccc
Confidence 433 6888999999999999997 889999999999999999999988776665554333221 11111 111 1111
Q ss_pred CCCccceeEEeCCCCCcceEEEEEeeccCCCCcchHhHHHHHHHHHHH----HHHHHHHHhhhc-CCeeeeeeeeeccCC
Q 001831 754 FPSSIIREVVRSPMVEAQCSVQLCFPVELKNGTMVEEINYVGFLSKLL----ETKMMQVLRFKH-GQIYSASVSVFLGGN 828 (1008)
Q Consensus 754 ~p~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~L~~~l----~s~L~~~lRe~~-gl~Y~~~~~~~~~~~ 828 (1008)
.+....+.+-....++.+..|.++|-+.... | .....++.+|-..+ -+.+.+.+-|-. -++-++++.....
T Consensus 259 i~e~t~~tVefp~~Des~G~v~~aW~g~s~s-D-~~t~~a~~vL~dyls~savapf~~~fVeieDP~assv~f~~~~~-- 334 (1022)
T KOG0961|consen 259 IKESTVHTVEFPTDDESRGAVEVAWFGHSPS-D-LETHSALHVLFDYLSNSAVAPFQKDFVEIEDPLASSVSFHIAEG-- 334 (1022)
T ss_pred CCccceeeeecCCcccccceEEEEEcCCCHH-H-hhhHHHHHHHHHHhccccccccccceEEecCccccceeeeeecc--
Confidence 2222222222233345677888888774322 1 12223344444443 334444443322 2344444433321
Q ss_pred CCCCCCCcceeEEEEEE-eCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccc--hHHHHHHHHHhhc
Q 001831 829 KHSRTGDVRGDISINFS-CDPEISFKLVDLALDEISRLQKEGPSDEDVSTILELEQRAHETGLQE--NYHWLDRILCSYQ 905 (1008)
Q Consensus 829 ~~~~~~~~~g~~~i~~~-~~~~~~~~~~~~~~~~l~~i~~~~is~~el~~ak~~~~~~~~~~~~~--~~~~~~~l~~~~~ 905 (1008)
..-.+.+.+. ++.+++++....+.+.+.+- ..|+-+.+.......+-++..+.+. ++..|+.+...+.
T Consensus 335 -------vrc~i~L~f~gVP~EKi~~~~~k~l~~l~et--~~iDm~Rm~~~i~~t~~~yL~nlE~n~~s~fms~ii~d~~ 405 (1022)
T KOG0961|consen 335 -------VRCDIRLNFAGVPVEKIDECAPKFLDKLVET--ANIDMERMGYLIDQTILNYLVNLETNAPSDFMSHIIGDQL 405 (1022)
T ss_pred -------cceeEEEeecCCcHHHhhhhhHHHHHHHHHh--cccCHHHHHHHHHHHHHHHHHhhhcCChHHHHHHHhhhhh
Confidence 2333455554 46788888888777777643 3477666665555555555555433 2445555554443
Q ss_pred cccccC-CCCcchhhchhhHHHHHhcCCHHHHHHHHHHhcCCCCCCceEEEEEecCchhhHHHHhhhccCccccchhHHH
Q 001831 906 SRVYSG-DVGTSFKIQDEARSKVRKSLQPLTLQLALQRIMPYPCNKQFTVVILMPQVSRFKFLRSLFRHNQTYHLGDAKA 984 (1008)
Q Consensus 906 ~~~~~~-~~~~~~~~~~~~~~~~i~~vT~edi~~~a~~~l~~~~~~~~~~~i~~p~~~~~~~l~~~~~~~~~~~~~~~~~ 984 (1008)
.+-..| ++..... .-++.+.+.+....|.+++.++||.. .+..+||..|...+.+++++--.. +---+-.
T Consensus 406 ygnedg~~l~~~lk--~l~~~~~L~~w~~kdW~~Llnk~Fve---n~s~tVia~Ps~em~e~i~kE~~~----~i~~r~~ 476 (1022)
T KOG0961|consen 406 YGNEDGELLKKRLK--ELDFLKKLKSWPAKDWVQLLNKYFVE---NPSATVIAVPSEEMVEKIAKEEEK----RIAARCE 476 (1022)
T ss_pred ccCcchhHHHHHHH--hHHHHHHHhhccHHHHHHHHHHHhcc---CCCeEEEecCcHHHHHHHHHHHHH----HHHHHHH
Confidence 221111 1111100 13456778999999999999999997 788999999999999999884443 2222333
Q ss_pred HHHHhhhHHHHHH
Q 001831 985 LAAVAGLTFLAFS 997 (1008)
Q Consensus 985 ~~~~~~~~~~~~~ 997 (1008)
..+--|++.++=.
T Consensus 477 ~lg~~gle~l~k~ 489 (1022)
T KOG0961|consen 477 KLGKKGLEELGKS 489 (1022)
T ss_pred HhChhhHHHHHHH
Confidence 4556677766543
No 28
>PF00675 Peptidase_M16: Insulinase (Peptidase family M16) This is family M16 in the peptidase classification. ; InterPro: IPR011765 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. The majority of the sequences in this entry are metallopeptidases and non-peptidase homologs belong to MEROPS peptidase family M16 (clan ME), subfamilies M16A, M16B and M16C; they include: Insulinase, insulin-degrading enzyme (3.4.24.56 from EC) Mitochondrial processing peptidase alpha subunit, (Alpha-MPP, 3.4.24.64 from EC) Pitrlysin, Protease III precursor (3.4.24.55 from EC) Nardilysin, (3.4.24.61 from EC) Ubiquinol-cytochrome C reductase complex core protein I,mitochondrial precursor (1.10.2.2 from EC) Coenzyme PQQ synthesis protein F (3.4.99 from EC) These proteins do not share many regions of sequence similarity; the most noticeable is in the N-terminal section. This region includes a conserved histidine followed, two residues later by a glutamate and another histidine. In pitrilysin, it has been shown [] that this H-x-x-E-H motif is involved in enzymatic activity; the two histidines bind zinc and the glutamate is necessary for catalytic activity. The proteins classified as non-peptidase homologues either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. ; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 3P7L_A 3P7O_A 3TUV_A 3GO9_A 1BE3_B 1PP9_B 2A06_B 1SQB_B 1SQP_B 1L0N_B ....
Probab=99.66 E-value=1.4e-15 Score=144.85 Aligned_cols=144 Identities=16% Similarity=0.123 Sum_probs=131.8
Q ss_pred EEEEEecCCCCCeEEEEEEecCcCCCCC-cchhhhhchhHHHhhhcCCCCCCHHHHHHHHcCceEEEEEEecceeEEEEE
Q 001831 534 RVCYKCTDFLDDQVLFTGFSYGGLSELP-ESEYLSCSMGSTIAGEIGVFGYRPSMLMDMLAGKRVEGGTKVGAYMRTFSG 612 (1008)
Q Consensus 534 ~v~~~~~~~~~~~v~~~~~~~gg~~~~~-~~~g~~~~l~~~l~~~~g~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~ 612 (1008)
||++..++..+ .+.+.+++.+|....+ .+.|++|+++|+++ .|+.+++..++.+.++..|+.++++++.+++.|++
T Consensus 1 ~V~~~~~~~~~-~~~~~l~~~~Gs~~e~~~~~G~a~ll~~l~~--~gs~~~~~~~l~~~l~~~G~~~~~~t~~d~t~~~~ 77 (149)
T PF00675_consen 1 KVVLVEDPGSP-VVSVSLVFKAGSRYEPPGKPGLAHLLEHLLF--RGSKKYSSDELQEELESLGASFNASTSRDSTSYSA 77 (149)
T ss_dssp EEEEEESTTSS-EEEEEEEES-SGGGSCTTTTTHHHHHHHHTT--SBBSSSBHHHHHHHHHHTTCEEEEEEESSEEEEEE
T ss_pred CEEEEEcCCCC-EEEEEEEEeeccCCCCCCCCchhhhhhhhcc--cccchhhhhhhHHHhhhhccccceEecccceEEEE
Confidence 68888887655 4888887776665554 68999999999999 69999999999999999999999999999999999
Q ss_pred ecChhhHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHHhcCCCCcCCCC
Q 001831 613 DCSPSDLETALQLVYQLFTTNVAPGEEEVEIVMQMAEEVIRAQERDPYTAFANRVKEINYGNSYFFRPI 681 (1008)
Q Consensus 613 ~~~~~~l~~~l~ll~~~l~~p~~~~~~~~~~~k~~~~~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 681 (1008)
++++++++.+|+++++++.+|.| ++++|+++|..+..+++....+|...+.+.+++.+|.++||+.++
T Consensus 78 ~~~~~~~~~~l~~l~~~~~~P~f-~~~~~~~~r~~~~~ei~~~~~~~~~~~~~~l~~~~f~~~p~~~~~ 145 (149)
T PF00675_consen 78 SVLSEDLEKALELLADMLFNPSF-DEEEFEREREQILQEIEEIKENPQELAFEKLHSAAFRGHPYGNPL 145 (149)
T ss_dssp EEEGGGHHHHHHHHHHHHHSBGG-CHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTSGGGSHS
T ss_pred EEecccchhHHHHHHHHHhCCCC-CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHhccCCCCCCC
Confidence 99999999999999999999999 899999999999999999999999999999999999999999865
No 29
>PF08367 M16C_assoc: Peptidase M16C associated; InterPro: IPR013578 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain appears in eukaryotes as well as bacteria and tends to be found near the C terminus of metalloproteases and related sequences belonging to MEROPS peptidase family M16 (subfamily M16C, clan ME). These include: eupitrilysin, falcilysin, PreP peptidase, CYM1 peptidase and subfamily M16C non-peptidase homologues.; GO: 0008237 metallopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 2FGE_B 3S5I_A 3S5H_A 3S5M_A 3S5K_A.
Probab=98.29 E-value=1.4e-05 Score=82.53 Aligned_cols=124 Identities=15% Similarity=0.179 Sum_probs=86.9
Q ss_pred CCcEEEEEecCCCCCeEEEEEEecCcCCCCCcchhhhhchhHHHhhhcCCCCCCHHHHHHHHcCceEEEEEEec------
Q 001831 531 NGMRVCYKCTDFLDDQVLFTGFSYGGLSELPESEYLSCSMGSTIAGEIGVFGYRPSMLMDMLAGKRVEGGTKVG------ 604 (1008)
Q Consensus 531 NGl~v~~~~~~~~~~~v~~~~~~~gg~~~~~~~~g~~~~l~~~l~~~~g~~~~~~~~l~~~l~~~g~~~~~~~~------ 604 (1008)
+|++|++++.++ ++.+++++.+.-+ ..+.+.....-++..++.+.||+++++.++...+....+++++++.
T Consensus 77 ~~~~v~~~~~~T-nGI~Y~~l~fdl~--~l~~e~l~yl~Ll~~ll~~lgT~~~sy~el~~~i~~~tGGis~~~~~~~~~~ 153 (248)
T PF08367_consen 77 GGIPVLFHEQPT-NGIVYVRLYFDLS--DLPEEDLPYLPLLTDLLGELGTKNYSYEELSNEIDLYTGGISFSIEVYTDYD 153 (248)
T ss_dssp TTCEEEEEE----TTEEEEEEEEE-T--TS-CCCHCCHHHHHHHCCCS-BSSS-HHHHHHHHHHHSSEEEEEEEEEEEEC
T ss_pred CCccEEEEEcCC-CCeEEEEEEecCC--CCCHHHHHhHHHHHHHHHhCCCCCCCHHHHHHHHHHhCCCeEEEeeeccCCC
Confidence 699999998765 5679999988654 3443333222334556677999999999999998876655555542
Q ss_pred -----ceeEEEEEecChhhHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHhhc
Q 001831 605 -----AYMRTFSGDCSPSDLETALQLVYQLFTTNVAPGEEEVEIVMQMAEEVIRAQER 657 (1008)
Q Consensus 605 -----~~~~~~~~~~~~~~l~~~l~ll~~~l~~p~~~~~~~~~~~k~~~~~e~~~~~~ 657 (1008)
..++.+++.|+.++++++++++.+++.++.|.+.+++..+..+....+.+...
T Consensus 154 ~~~~~~~~l~is~k~L~~~~~~~~~ll~eil~~~~f~d~~rl~~ll~~~~s~~~~~i~ 211 (248)
T PF08367_consen 154 DDDKYRPYLVISAKCLDEKLDEAFELLSEILTETDFDDKERLKELLKELKSDMESSII 211 (248)
T ss_dssp TECCCEEEEEEEEEEEGGGHHHHHHHHHHHHHCB-TT-HHHHHHHHHHHHHHHHHHHH
T ss_pred CccceeEEEEEEEEeHhhhHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHHHHhhh
Confidence 23678899999999999999999999999997777777777777776665543
No 30
>PF03410 Peptidase_M44: Protein G1; InterPro: IPR005072 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M44 (clan ME). The active site residues for members of this family and family M16 occur in the motif HXXEHProtein. The type example is the vaccinia virus-type metalloendopeptidase G1 from vaccinia virus, it is a metalloendopeptidase expressed by many Poxviridae which appears to play a role in the maturation of viral proteins.; GO: 0004222 metalloendopeptidase activity, 0008270 zinc ion binding, 0019067 viral assembly, maturation, egress, and release
Probab=98.28 E-value=1.8e-05 Score=83.10 Aligned_cols=186 Identities=17% Similarity=0.221 Sum_probs=116.8
Q ss_pred EEcCCCcEEEEeecCCCCceEEEEEEEcccCCCCCCCCCChhHHHHHHccCCCCCCChhhHHHHHHHcccccCCCccccc
Q 001831 41 GRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDIIKFLESIGAEFGACQNAVT 120 (1008)
Q Consensus 41 ~~L~NGl~v~~~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ahllehl~f~gs~~~~~~~~~~~l~~~g~~~g~~~na~T 120 (1008)
..|+||+|+.+-+.-.. -+.+++. +.|.-.+-.+--|+||+|||.+-. |+. ..++ .||.|
T Consensus 2 IvL~NGVRiFin~~M~K--DIYlGIs-~FGFe~DI~~iLGiAHLLEHILIs----FD~---~~F~----------ANAST 61 (590)
T PF03410_consen 2 IVLSNGVRIFINPSMKK--DIYLGIS-NFGFENDIGEILGIAHLLEHILIS----FDS---SKFL----------ANAST 61 (590)
T ss_pred eEecCceEEEecCcccc--ceEEeec-ccccccchHHHHhHHHHHHHHeee----cch---HHhh----------cccch
Confidence 36999999987654221 2444432 467777777889999999999752 222 2233 39999
Q ss_pred cCCeEEEEEECCCCCHHHHHHHHHHHHHhccCC-----CCChHHHHHHHHHHHHHHhcCCCchhhhHHHHHHHHhcCCCC
Q 001831 121 SADETVYELFVPVDKPELLSRAISVLAEFSTEV-----RVSKDDLEKERGAVLEEYRGNRNASGRMQDAHWVLMMEGSKY 195 (1008)
Q Consensus 121 ~~d~t~y~~~~~~~~~~~l~~~l~~l~d~~~~p-----~~~~~~~~~er~~v~~e~~~~~~~~~~~~~~~~~~~~~~~p~ 195 (1008)
++.+..|++....+. .--+|+..+..|+++- .|+...++.--..+.+|.--|... .-.-.+...+.+|..|
T Consensus 62 aRsYMSFWC~si~g~--~~~DAvrtliSWFF~~g~Lk~~F~~~~i~~hikELENEYYFRnEv--fHCmDvLtfL~gGDLY 137 (590)
T PF03410_consen 62 ARSYMSFWCKSIRGR--TYIDAVRTLISWFFDNGKLKDNFSRSKIKNHIKELENEYYFRNEV--FHCMDVLTFLGGGDLY 137 (590)
T ss_pred hhhhhhhhhhhccCC--ChhHHHHHHHHHhhcCCcccccccHhHHHHHHHHHhhhhhhhhhH--HHHHHHHHHhcCCccc
Confidence 999999999766544 2456777777777653 366666655555555554333211 1122334556677766
Q ss_pred CccCCCCCHHHhcCCC--HHHHHHHHHhcccCCCcEEEEEccCCCHHHHHHHHHHhhcCCCCCCC
Q 001831 196 AECLPIGLEKVIRTVS--SDTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATD 258 (1008)
Q Consensus 196 ~~~~~~g~~~~i~~it--~~~l~~f~~~~y~p~n~~l~i~Gdi~d~~~~~~~i~~~f~~~~~~~~ 258 (1008)
. +|-.+-+++++ .+-|.+--++ ....|.++++- .+ + +.+..++++.||.+|.-+.
T Consensus 138 N----GGRi~ML~~l~~i~~mL~~RM~~-I~GpniVIFVk-~l-~-~~~l~lL~~TFGtLP~cP~ 194 (590)
T PF03410_consen 138 N----GGRIDMLNNLNDIRNMLSNRMHR-IIGPNIVIFVK-EL-N-PNILSLLSNTFGTLPSCPL 194 (590)
T ss_pred C----CchHHHHhhhHHHHHHHHHHHHh-hcCCcEEEEEe-cc-C-HHHHHHHHHhcCCCCCCcc
Confidence 5 56666666554 2233332223 45567777655 57 6 6788999999999987543
No 31
>PHA03081 putative metalloprotease; Provisional
Probab=98.20 E-value=3.3e-05 Score=81.28 Aligned_cols=186 Identities=18% Similarity=0.220 Sum_probs=118.5
Q ss_pred EEcCCCcEEEEeecCCCCceEEEEEEEcccCCCCCCCCCChhHHHHHHccCCCCCCChhhHHHHHHHcccccCCCccccc
Q 001831 41 GRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDIIKFLESIGAEFGACQNAVT 120 (1008)
Q Consensus 41 ~~L~NGl~v~~~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ahllehl~f~gs~~~~~~~~~~~l~~~g~~~g~~~na~T 120 (1008)
..|+||+|+.+.+.-.. .+.+++. +.|.-.+-.+--|+||++||.+-. |+. ..++ .||.|
T Consensus 2 i~~~ngvr~f~~~~m~k--diy~gi~-~fgfe~di~~~lg~ahllehili~----fd~---~~f~----------anast 61 (595)
T PHA03081 2 IVLSNGVRIFINPSMKK--DIYLGIS-NFGFENDIGEILGIAHLLEHILIS----FDS---SKFV----------ANAST 61 (595)
T ss_pred eEecCceEEEecCcccc--ceEEeec-ccccccchHHHHhHHHHHHHHeee----cch---HHhc----------ccchh
Confidence 36999999987664322 2444332 467777777889999999999753 222 2222 39999
Q ss_pred cCCeEEEEEECCCCCHHHHHHHHHHHHHhccCCC-----CChHHHHHHHHHHHHHHhcCCCchhhhHHHHHHHHhcCCCC
Q 001831 121 SADETVYELFVPVDKPELLSRAISVLAEFSTEVR-----VSKDDLEKERGAVLEEYRGNRNASGRMQDAHWVLMMEGSKY 195 (1008)
Q Consensus 121 ~~d~t~y~~~~~~~~~~~l~~~l~~l~d~~~~p~-----~~~~~~~~er~~v~~e~~~~~~~~~~~~~~~~~~~~~~~p~ 195 (1008)
++.+..|++....+.+ -.+|+..+..|++++. |+...++.--..+.+|.--|... .-...+...+.+|..|
T Consensus 62 ~r~ymsfwc~sirg~~--y~DAvrtliSWFF~~~~Lr~~F~~~~ik~~ikELENEYYFRnEv--fHCmDvLTfL~gGDLY 137 (595)
T PHA03081 62 ARSYMSFWCKSIRGRS--YIDAIRTLISWFFDNGKLKDNFSLSKIRNHIKELENEYYFRNEV--FHCMDVLTFLGGGDLY 137 (595)
T ss_pred hhhhHhHhhHhhcCCc--hHHHHHHHHHHhccCCccccccchhhHHHHHHHHhhhhhhhhhh--HHHHHHHHHhcCCccc
Confidence 9999999998776543 5588888999988875 55555554445555554333211 1122334556677766
Q ss_pred CccCCCCCHHHhcCCC--HHHHHHHHHhcccCCCcEEEEEccCCCHHHHHHHHHHhhcCCCCCCC
Q 001831 196 AECLPIGLEKVIRTVS--SDTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATD 258 (1008)
Q Consensus 196 ~~~~~~g~~~~i~~it--~~~l~~f~~~~y~p~n~~l~i~Gdi~d~~~~~~~i~~~f~~~~~~~~ 258 (1008)
. +|-.+-+++++ .+-|.+-- +-....|.+|++- .+ + +.+..++.+.||.+|.-+.
T Consensus 138 N----GGRi~ML~~l~~i~~~L~~RM-~~I~GpniVIFVk-~l-n-~~~l~lL~~TFGtLP~~P~ 194 (595)
T PHA03081 138 N----GGRIDMLDNLNDVRDMLSNRM-HRISGPNIVIFVK-EL-N-PNTLSLLNNTFGTLPSCPE 194 (595)
T ss_pred C----CchHHHHhhhHHHHHHHHHHH-HhhcCCcEEEEEe-cc-C-HHHHHHHHHhcCCCCCCcc
Confidence 5 56666666554 22222222 2245567777655 57 6 6788999999999987543
No 32
>PF03410 Peptidase_M44: Protein G1; InterPro: IPR005072 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M44 (clan ME). The active site residues for members of this family and family M16 occur in the motif HXXEHProtein. The type example is the vaccinia virus-type metalloendopeptidase G1 from vaccinia virus, it is a metalloendopeptidase expressed by many Poxviridae which appears to play a role in the maturation of viral proteins.; GO: 0004222 metalloendopeptidase activity, 0008270 zinc ion binding, 0019067 viral assembly, maturation, egress, and release
Probab=97.02 E-value=0.017 Score=61.51 Aligned_cols=187 Identities=13% Similarity=0.182 Sum_probs=101.8
Q ss_pred EEecCCcEEEEEecCCCCCeEEEEEEecCcCCCCCcchhhhhchhHHHhhhcCCCCCCHHHHHHHHcCceEEEEEEecce
Q 001831 527 LVLSNGMRVCYKCTDFLDDQVLFTGFSYGGLSELPESEYLSCSMGSTIAGEIGVFGYRPSMLMDMLAGKRVEGGTKVGAY 606 (1008)
Q Consensus 527 ~~L~NGl~v~~~~~~~~~~~v~~~~~~~gg~~~~~~~~g~~~~l~~~l~~~~g~~~~~~~~l~~~l~~~g~~~~~~~~~~ 606 (1008)
+.|+||+||.+.+.-. ++ +++.+..-|--.+..+-.|++|++||.|. .++...+ --|++|++.
T Consensus 2 IvL~NGVRiFin~~M~-KD-IYlGIs~FGFe~DI~~iLGiAHLLEHILI------sFD~~~F---------~ANASTaRs 64 (590)
T PF03410_consen 2 IVLSNGVRIFINPSMK-KD-IYLGISNFGFENDIGEILGIAHLLEHILI------SFDSSKF---------LANASTARS 64 (590)
T ss_pred eEecCceEEEecCccc-cc-eEEeecccccccchHHHHhHHHHHHHHee------ecchHHh---------hcccchhhh
Confidence 5799999999887542 33 88876544444556677899999999987 4544432 246777777
Q ss_pred eEEEEEecChhh-HHHHHHHHHHHhcc-C----CCCCHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHHhcCCCCcCC-
Q 001831 607 MRTFSGDCSPSD-LETALQLVYQLFTT-N----VAPGEEEVEIVMQMAEEVIRAQERDPYTAFANRVKEINYGNSYFFR- 679 (1008)
Q Consensus 607 ~~~~~~~~~~~~-l~~~l~ll~~~l~~-p----~~~~~~~~~~~k~~~~~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~- 679 (1008)
+..|=+.+.... ..+++.-+..++++ . .| +...++...+.+..|+- -.+-.-..++ +...+.|++-|.-
T Consensus 65 YMSFWC~si~g~~~~DAvrtliSWFF~~g~Lk~~F-~~~~i~~hikELENEYY--FRnEvfHCmD-vLtfL~gGDLYNGG 140 (590)
T PF03410_consen 65 YMSFWCKSIRGRTYIDAVRTLISWFFDNGKLKDNF-SRSKIKNHIKELENEYY--FRNEVFHCMD-VLTFLGGGDLYNGG 140 (590)
T ss_pred hhhhhhhhccCCChhHHHHHHHHHhhcCCcccccc-cHhHHHHHHHHHhhhhh--hhhhHHHHHH-HHHHhcCCcccCCc
Confidence 777655443333 22333333333322 2 23 33334333333333321 1121222223 3444556655532
Q ss_pred CC-ChhhhhcCChhHHHHHHhhhhCCCCCcEEEEEecCCccchHHHHHHhhccCCCCCCCC
Q 001831 680 PI-RISDLQKVDPLKACDYFNSCFKDPSTFTVVIVGNIDPSNGIPLILQYLGGIPKPPEPI 739 (1008)
Q Consensus 680 ~~-~~~~i~~lt~~~l~~~~~~~~~~~~~~~l~i~Gd~~~~~~~~~i~~~~~~l~~~~~~~ 739 (1008)
.+ ..+++..+ .+-|..-.++ ... .|++++| -.++ +.+..++++.||++|..+...
T Consensus 141 Ri~ML~~l~~i-~~mL~~RM~~-I~G-pniVIFV-k~l~-~~~l~lL~~TFGtLP~cP~~I 196 (590)
T PF03410_consen 141 RIDMLNNLNDI-RNMLSNRMHR-IIG-PNIVIFV-KELN-PNILSLLSNTFGTLPSCPLTI 196 (590)
T ss_pred hHHHHhhhHHH-HHHHHHHHHh-hcC-CcEEEEE-eccC-HHHHHHHHHhcCCCCCCcccc
Confidence 22 23333332 1233444453 554 4555555 3455 678899999999999876543
No 33
>PHA03081 putative metalloprotease; Provisional
Probab=96.79 E-value=0.026 Score=60.34 Aligned_cols=188 Identities=15% Similarity=0.198 Sum_probs=100.0
Q ss_pred EEecCCcEEEEEecCCCCCeEEEEEEecCcCCCCCcchhhhhchhHHHhhhcCCCCCCHHHHHHHHcCceEEEEEEecce
Q 001831 527 LVLSNGMRVCYKCTDFLDDQVLFTGFSYGGLSELPESEYLSCSMGSTIAGEIGVFGYRPSMLMDMLAGKRVEGGTKVGAY 606 (1008)
Q Consensus 527 ~~L~NGl~v~~~~~~~~~~~v~~~~~~~gg~~~~~~~~g~~~~l~~~l~~~~g~~~~~~~~l~~~l~~~g~~~~~~~~~~ 606 (1008)
+.|+||++|...+.-. ++ +++.+...|--.+..+-.|++|+++|.+. .++...+ --|++|.+.
T Consensus 2 i~~~ngvr~f~~~~m~-kd-iy~gi~~fgfe~di~~~lg~ahllehili------~fd~~~f---------~anast~r~ 64 (595)
T PHA03081 2 IVLSNGVRIFINPSMK-KD-IYLGISNFGFENDIGEILGIAHLLEHILI------SFDSSKF---------VANASTARS 64 (595)
T ss_pred eEecCceEEEecCccc-cc-eEEeecccccccchHHHHhHHHHHHHHee------ecchHHh---------cccchhhhh
Confidence 4799999999887543 33 88776544444555667899999999887 3443322 235666666
Q ss_pred eEEEEEecChhh-HHHHHHHHHHHhccCCCC----CHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHHhcCCCCcCC-C
Q 001831 607 MRTFSGDCSPSD-LETALQLVYQLFTTNVAP----GEEEVEIVMQMAEEVIRAQERDPYTAFANRVKEINYGNSYFFR-P 680 (1008)
Q Consensus 607 ~~~~~~~~~~~~-l~~~l~ll~~~l~~p~~~----~~~~~~~~k~~~~~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~-~ 680 (1008)
+..|-+.+.... ..+++.-+..+++++... ....++...+.+..|+ +-.+-.-..++ +...+.|++-|.- .
T Consensus 65 ymsfwc~sirg~~y~DAvrtliSWFF~~~~Lr~~F~~~~ik~~ikELENEY--YFRnEvfHCmD-vLTfL~gGDLYNGGR 141 (595)
T PHA03081 65 YMSFWCKSIRGRSYIDAIRTLISWFFDNGKLKDNFSLSKIRNHIKELENEY--YFRNEVFHCMD-VLTFLGGGDLYNGGR 141 (595)
T ss_pred hHhHhhHhhcCCchHHHHHHHHHHhccCCccccccchhhHHHHHHHHhhhh--hhhhhhHHHHH-HHHHhcCCcccCCch
Confidence 666544333222 234454444445443322 2223333333333332 11121222222 3444556665532 2
Q ss_pred C-ChhhhhcCChhHHHHHHhhhhCCCCCcEEEEEecCCccchHHHHHHhhccCCCCCCCC
Q 001831 681 I-RISDLQKVDPLKACDYFNSCFKDPSTFTVVIVGNIDPSNGIPLILQYLGGIPKPPEPI 739 (1008)
Q Consensus 681 ~-~~~~i~~lt~~~l~~~~~~~~~~~~~~~l~i~Gd~~~~~~~~~i~~~~~~l~~~~~~~ 739 (1008)
+ ..+.+..+ .+-|..-.++ ... .|++++| -.++ +.+..++++.||++|..+...
T Consensus 142 i~ML~~l~~i-~~~L~~RM~~-I~G-pniVIFV-k~ln-~~~l~lL~~TFGtLP~~P~~I 196 (595)
T PHA03081 142 IDMLDNLNDV-RDMLSNRMHR-ISG-PNIVIFV-KELN-PNTLSLLNNTFGTLPSCPETI 196 (595)
T ss_pred HHHHhhhHHH-HHHHHHHHHh-hcC-CcEEEEE-eccC-HHHHHHHHHhcCCCCCCcccc
Confidence 1 22223222 1223344443 544 4555555 3455 678899999999999876543
No 34
>PF08367 M16C_assoc: Peptidase M16C associated; InterPro: IPR013578 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain appears in eukaryotes as well as bacteria and tends to be found near the C terminus of metalloproteases and related sequences belonging to MEROPS peptidase family M16 (subfamily M16C, clan ME). These include: eupitrilysin, falcilysin, PreP peptidase, CYM1 peptidase and subfamily M16C non-peptidase homologues.; GO: 0008237 metallopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 2FGE_B 3S5I_A 3S5H_A 3S5M_A 3S5K_A.
Probab=94.66 E-value=0.2 Score=51.94 Aligned_cols=110 Identities=15% Similarity=0.093 Sum_probs=68.4
Q ss_pred CCCcEEEEeecCCCCceEEEEEEEcccCCCCCCCCCChhHHHHHHc-cCCCCCCChhhHHHHHHHcccccCCCccccccC
Q 001831 44 DNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLA-FSATEKYTNHDIIKFLESIGAEFGACQNAVTSA 122 (1008)
Q Consensus 44 ~NGl~v~~~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ahllehl~-f~gs~~~~~~~~~~~l~~~g~~~g~~~na~T~~ 122 (1008)
.+|.+|+..+.++. +.+.++++|+.+...+. +-+=++ ++..++ -.||++++..++.......-.-++.....+++.
T Consensus 76 ~~~~~v~~~~~~Tn-GI~Y~~l~fdl~~l~~e-~l~yl~-Ll~~ll~~lgT~~~sy~el~~~i~~~tGGis~~~~~~~~~ 152 (248)
T PF08367_consen 76 LGGIPVLFHEQPTN-GIVYVRLYFDLSDLPEE-DLPYLP-LLTDLLGELGTKNYSYEELSNEIDLYTGGISFSIEVYTDY 152 (248)
T ss_dssp CTTCEEEEEE---T-TEEEEEEEEE-TTS-CC-CHCCHH-HHHHHCCCS-BSSS-HHHHHHHHHHHSSEEEEEEEEEEEE
T ss_pred cCCccEEEEEcCCC-CeEEEEEEecCCCCCHH-HHHhHH-HHHHHHHhCCCCCCCHHHHHHHHHHhCCCeEEEeeeccCC
Confidence 37999999887654 47999999999866542 334444 445554 449999999999888876532233334344433
Q ss_pred ----C---eEEEEEECCCCCHHHHHHHHHHHHHhccCCCCChHH
Q 001831 123 ----D---ETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDD 159 (1008)
Q Consensus 123 ----d---~t~y~~~~~~~~~~~l~~~l~~l~d~~~~p~~~~~~ 159 (1008)
. ...+.+.+.. ++++.+++++.+++.++.|++.+
T Consensus 153 ~~~~~~~~~l~is~k~L~---~~~~~~~~ll~eil~~~~f~d~~ 193 (248)
T PF08367_consen 153 DDDDKYRPYLVISAKCLD---EKLDEAFELLSEILTETDFDDKE 193 (248)
T ss_dssp CTECCCEEEEEEEEEEEG---GGHHHHHHHHHHHHHCB-TT-HH
T ss_pred CCccceeEEEEEEEEeHh---hhHHHHHHHHHHHHhccCCCcHH
Confidence 1 1233444553 45999999999999999998875
No 35
>PF09851 SHOCT: Short C-terminal domain; InterPro: IPR018649 This family of hypothetical prokaryotic proteins has no known function.
Probab=67.19 E-value=13 Score=23.99 Aligned_cols=24 Identities=21% Similarity=0.194 Sum_probs=17.5
Q ss_pred HHHHHHHhC-CCCHHHHHHHHHHHH
Q 001831 370 IEVARVRLH-GFSEREVSVARALLM 393 (1008)
Q Consensus 370 ~~l~~l~~~-g~s~~el~~ak~~l~ 393 (1008)
+.|+.+.+. -||++|+++.|+.++
T Consensus 6 ~~L~~l~~~G~IseeEy~~~k~~ll 30 (31)
T PF09851_consen 6 EKLKELYDKGEISEEEYEQKKARLL 30 (31)
T ss_pred HHHHHHHHcCCCCHHHHHHHHHHHh
Confidence 345555554 599999999998764
No 36
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=44.32 E-value=22 Score=31.66 Aligned_cols=10 Identities=20% Similarity=0.385 Sum_probs=4.3
Q ss_pred HHHHHHhhhH
Q 001831 983 KALAAVAGLT 992 (1008)
Q Consensus 983 ~~~~~~~~~~ 992 (1008)
+.+.+.||+.
T Consensus 69 Ii~gv~aGvI 78 (122)
T PF01102_consen 69 IIFGVMAGVI 78 (122)
T ss_dssp HHHHHHHHHH
T ss_pred hhHHHHHHHH
Confidence 3334444444
No 37
>PF12191 stn_TNFRSF12A: Tumour necrosis factor receptor stn_TNFRSF12A_TNFR domain; InterPro: IPR022316 The tumour necrosis factor (TNF) receptor (TNFR) superfamily comprises more than 20 type-I transmembrane proteins. Family members are defined based on similarity in their extracellular domain - a region that contains many cysteine residues arranged in a specific repetitive pattern []. The cysteines allow formation of an extended rod-like structure, responsible for ligand binding []. Upon receptor activation, different intracellular signalling complexes are assembled for different members of the TNFR superfamily, depending on their intracellular domains and sequences []. Activation of TNFRs can therefore induce a range of disparate effects, including cell proliferation, differentiation, survival, or apoptotic cell death, depending upon the receptor involved []. TNFRs are widely distributed and play important roles in many crucial biological processes, such as lymphoid and neuronal development, innate and adaptive immunity, and maintenance of cellular homeostasis []. Drugs that manipulate their signalling have potential roles in the prevention and treatment of many diseases, such as viral infections, coronary heart disease, transplant rejection, and immune disease []. TNF receptor 12 (also known as TWEAK receptor, and fibroblast growth factor-inducible-14 (Fn14)) has been implicated in endothelial cell growth and migration []. The receptor may also play a role in cell-matrix interactions [].; PDB: 2KN0_A 2RPJ_A 2KMZ_A 2EQP_A.
Probab=38.38 E-value=10 Score=33.17 Aligned_cols=28 Identities=39% Similarity=0.593 Sum_probs=0.0
Q ss_pred chhHHHHHHHhhhHHHHHHHHHhhhhhcc
Q 001831 979 LGDAKALAAVAGLTFLAFSLWRYSRRTLK 1007 (1008)
Q Consensus 979 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1008)
++.+..++.+.|++. .|+.||++||.+|
T Consensus 82 ~~sal~v~lVl~lls-g~lv~rrcrrr~~ 109 (129)
T PF12191_consen 82 LGSALSVVLVLALLS-GFLVWRRCRRREK 109 (129)
T ss_dssp -----------------------------
T ss_pred hhhHHHHHHHHHHHH-HHHHHhhhhcccc
Confidence 334444455555544 7788888888776
No 38
>PF01729 QRPTase_C: Quinolinate phosphoribosyl transferase, C-terminal domain; InterPro: IPR002638 Quinolinate phosphoribosyl transferase (QPRTase) or nicotinate-nucleotide pyrophosphorylase 2.4.2.19 from EC is involved in the de novo synthesis of NAD in both prokaryotes and eukaryotes. It catalyses the reaction of quinolinic acid with 5-phosphoribosyl-1-pyrophosphate (PRPP) in the presence of Mg2+ to give rise to nicotinic acid mononucleotide (NaMN), pyrophosphate and carbon dioxide [, ]. Unlike IPR004393 from INTERPRO, this domain also includes the molybdenum transport system protein ModD.; GO: 0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity, 0009435 NAD biosynthetic process; PDB: 3C2O_A 3C2F_A 3C2E_A 3C2R_A 3C2V_A 1QPN_E 1QPO_A 1QPQ_F 1QPR_E 2I14_D ....
Probab=32.96 E-value=45 Score=31.95 Aligned_cols=43 Identities=12% Similarity=0.027 Sum_probs=34.0
Q ss_pred hhhcCChhHHHHHHhhhhCCCCCcEEEEEecCCccchHHHHHH
Q 001831 685 DLQKVDPLKACDYFNSCFKDPSTFTVVIVGNIDPSNGIPLILQ 727 (1008)
Q Consensus 685 ~i~~lt~~~l~~~~~~~~~~~~~~~l~i~Gd~~~~~~~~~i~~ 727 (1008)
.+++++++++++..+..+..+.++.+.++|+++.+.+.++.+.
T Consensus 105 ~lD~~~~~~~~~~v~~l~~~~~~v~ie~SGGI~~~ni~~ya~~ 147 (169)
T PF01729_consen 105 MLDNMSPEDLKEAVEELRELNPRVKIEASGGITLENIAEYAKT 147 (169)
T ss_dssp EEES-CHHHHHHHHHHHHHHTTTSEEEEESSSSTTTHHHHHHT
T ss_pred EecCcCHHHHHHHHHHHhhcCCcEEEEEECCCCHHHHHHHHhc
Confidence 4677788999888885544456799999999999999888764
No 39
>COG1725 Predicted transcriptional regulators [Transcription]
Probab=32.26 E-value=1.9e+02 Score=26.04 Aligned_cols=66 Identities=15% Similarity=0.031 Sum_probs=44.0
Q ss_pred HHHHHHHHhhhcCCeeeeeeeeeccCCCCCCCCCcceeEEEEE---EeCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHH
Q 001831 802 ETKMMQVLRFKHGQIYSASVSVFLGGNKHSRTGDVRGDISINF---SCDPEISFKLVDLALDEISRLQKEGPSDEDVSTI 878 (1008)
Q Consensus 802 ~s~L~~~lRe~~gl~Y~~~~~~~~~~~~~~~~~~~~g~~~i~~---~~~~~~~~~~~~~~~~~l~~i~~~~is~~el~~a 878 (1008)
-+|-|+.| |+.|..|... +.|.|.-.- ..+..+...+.+.+...+.+++..|++.+|+...
T Consensus 52 v~raY~eL-E~eG~i~t~r---------------g~G~fV~~~~~~~~~~~~~~~~~~~l~~~I~~~~~~G~s~eei~~~ 115 (125)
T COG1725 52 VQRAYQEL-EREGIVETKR---------------GKGTFVTEDAKEILDQLKRELAEEELEEFIEEAKALGLSLEEILEL 115 (125)
T ss_pred HHHHHHHH-HHCCCEEEec---------------CeeEEEcCCchhhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 56788888 5679888764 455442211 1123355666777777888888899999998877
Q ss_pred HHHHH
Q 001831 879 LELEQ 883 (1008)
Q Consensus 879 k~~~~ 883 (1008)
.....
T Consensus 116 ~~~~~ 120 (125)
T COG1725 116 LKEIY 120 (125)
T ss_pred HHHHH
Confidence 55444
No 40
>cd01324 cbb3_Oxidase_CcoQ Cytochrome cbb oxidase CcoQ. Cytochrome cbb3 oxidase, the terminal oxidase in the respiratory chains of proteobacteria, is a multi-chain transmembrane protein located in the cell membrane. Like other cytochrome oxidases, it catalyzes the reduction of O2 and simultaneously pumps protons across the membrane. Found exclusively in proteobacteria, cbb3 is believed to be a modern enzyme that has evolved independently to perform a specialized function in microaerobic energy metabolism. The cbb3 operon contains four genes (ccoNOQP or fixNOQP), with ccoN coding for subunit I. Instead of a CuA-containing subunit II analogous to other cytochrome oxidases, cbb3 utilizes subunits ccoO and ccoP, which contain one and two hemes, respectively, to transfer electrons to the binuclear center. ccoQ, the fourth subunit, is a single transmembrane helix protein. It has been shown to protect the core complex from proteolytic degradation by serine proteases. See cd00919, cd01322
Probab=31.71 E-value=32 Score=24.88 Aligned_cols=17 Identities=29% Similarity=0.622 Sum_probs=14.9
Q ss_pred hHHHHHHHHHhhhhhcc
Q 001831 991 LTFLAFSLWRYSRRTLK 1007 (1008)
Q Consensus 991 ~~~~~~~~~~~~~~~~~ 1007 (1008)
++|+++++|-++.++++
T Consensus 21 ~~Figiv~wa~~p~~k~ 37 (48)
T cd01324 21 LFFLGVVVWAFRPGRKK 37 (48)
T ss_pred HHHHHHHHHHhCCCcch
Confidence 46999999999998876
No 41
>PF05545 FixQ: Cbb3-type cytochrome oxidase component FixQ; InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=29.42 E-value=60 Score=23.53 Aligned_cols=24 Identities=21% Similarity=0.405 Sum_probs=17.8
Q ss_pred HHHHHhhhHHHHHHHHHhhhhhcc
Q 001831 984 ALAAVAGLTFLAFSLWRYSRRTLK 1007 (1008)
Q Consensus 984 ~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1008)
...+.-.++|.+++.|.+++++++
T Consensus 13 ~~~v~~~~~F~gi~~w~~~~~~k~ 36 (49)
T PF05545_consen 13 IGTVLFFVFFIGIVIWAYRPRNKK 36 (49)
T ss_pred HHHHHHHHHHHHHHHHHHcccchh
Confidence 344455667899999999988765
No 42
>TIGR03778 VPDSG_CTERM VPDSG-CTERM exosortase interaction domain. Through in silico analysis, we previously described the PEP-CTERM/exosortase system (PubMed:16930487). This model describes a PEP-CTERM-like variant C-terminal protein sorting signal, as found at the C-terminus of twenty otherwise unrelated proteins in Verrucomicrobiae bacterium DG1235. The variant motif, VPDSG, seems an intermediate between the VPEP motif (TIGR02595) of typical exosortase systems and the classical LPXTG of sortase in Gram-positive bacteria.
Probab=28.85 E-value=75 Score=19.50 Aligned_cols=19 Identities=26% Similarity=0.242 Sum_probs=14.2
Q ss_pred HHHHhhhHHHHHHHHHhhh
Q 001831 985 LAAVAGLTFLAFSLWRYSR 1003 (1008)
Q Consensus 985 ~~~~~~~~~~~~~~~~~~~ 1003 (1008)
-++..|+-+++++.||++.
T Consensus 7 T~~Ll~~~l~~l~~~rRr~ 25 (26)
T TIGR03778 7 TLALLGLGLLGLLGLRRRX 25 (26)
T ss_pred HHHHHHHHHHHHHHHhhcc
Confidence 5566777788889888753
No 43
>PHA01735 hypothetical protein
Probab=28.31 E-value=2.2e+02 Score=22.12 Aligned_cols=36 Identities=17% Similarity=0.199 Sum_probs=24.5
Q ss_pred cHHHHHHHHHHHH-HHHHhCCCCHHHHHHHHHHHHHH
Q 001831 850 ISFKLVDLALDEI-SRLQKEGPSDEDVSTILELEQRA 885 (1008)
Q Consensus 850 ~~~~~~~~~~~~l-~~i~~~~is~~el~~ak~~~~~~ 885 (1008)
..+++-.++.++| .+++.+.-|..+|..|..-+..+
T Consensus 9 ~fs~LH~~lt~El~~RiksgeATtaDL~AA~d~Lk~N 45 (76)
T PHA01735 9 QFDELHQLLTNELLSRIKSGEATTADLRAACDWLKSN 45 (76)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHC
Confidence 4455555555544 67888888888998887766653
No 44
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=26.67 E-value=68 Score=28.62 Aligned_cols=28 Identities=14% Similarity=0.271 Sum_probs=18.0
Q ss_pred cchhHHHHHHHhhhH-HHHHHHHHhhhhh
Q 001831 978 HLGDAKALAAVAGLT-FLAFSLWRYSRRT 1005 (1008)
Q Consensus 978 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 1005 (1008)
-+=-.+++||+.|+. +++|++||++++.
T Consensus 67 ~~Ii~gv~aGvIg~Illi~y~irR~~Kk~ 95 (122)
T PF01102_consen 67 IGIIFGVMAGVIGIILLISYCIRRLRKKS 95 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHS---
T ss_pred eehhHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 455778899999998 5555665555543
No 45
>PF00046 Homeobox: Homeobox domain not present here.; InterPro: IPR001356 The homeobox domain was first identified in a number of drosophila homeotic and segmentation proteins, but is now known to be well-conserved in many other animals, including vertebrates [, , ]. Hox genes encode homeodomain-containing transcriptional regulators that operate differential genetic programs along the anterior-posterior axis of animal bodies []. The domain binds DNA through a helix-turn-helix (HTH) structure. The HTH motif is characterised by two alpha-helices, which make intimate contacts with the DNA and are joined by a short turn. The second helix binds to DNA via a number of hydrogen bonds and hydrophobic interactions, which occur between specific side chains and the exposed bases and thymine methyl groups within the major groove of the DNA []. The first helix helps to stabilise the structure. The motif is very similar in sequence and structure in a wide range of DNA-binding proteins (e.g., cro and repressor proteins, homeotic proteins, etc.). One of the principal differences between HTH motifs in these different proteins arises from the stereo-chemical requirement for glycine in the turn which is needed to avoid steric interference of the beta-carbon with the main chain: for cro and repressor proteins the glycine appears to be mandatory, while for many of the homeotic and other DNA-binding proteins the requirement is relaxed.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2DA3_A 1LFB_A 2LFB_A 2ECB_A 2DA5_A 3D1N_O 3A03_A 2XSD_C 3CMY_A 1AHD_P ....
Probab=24.19 E-value=87 Score=23.30 Aligned_cols=45 Identities=27% Similarity=0.324 Sum_probs=39.7
Q ss_pred hhhHHHHhhhccCccccchhHHHHHHHhhhHHHHHHHHHhhhhhc
Q 001831 962 SRFKFLRSLFRHNQTYHLGDAKALAAVAGLTFLAFSLWRYSRRTL 1006 (1008)
Q Consensus 962 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1008)
.-...|+..|..+.-+.......+|...||..--+-.|-..||.+
T Consensus 10 ~q~~~L~~~f~~~~~p~~~~~~~la~~l~l~~~~V~~WF~nrR~k 54 (57)
T PF00046_consen 10 EQLKVLEEYFQENPYPSKEEREELAKELGLTERQVKNWFQNRRRK 54 (57)
T ss_dssp HHHHHHHHHHHHSSSCHHHHHHHHHHHHTSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccccccccccccccccccccccCHHHhHHH
Confidence 456788899999999999999999999999999999999888754
No 46
>TIGR01167 LPXTG_anchor LPXTG-motif cell wall anchor domain. A common feature of this proteins containing this domain appears to be a high proportion of charged and zwitterionic residues immediatedly upstream of the LPXTG motif. This model differs from other descriptions of the LPXTG region by including a portion of that upstream charged region.
Probab=21.46 E-value=1e+02 Score=20.03 Aligned_cols=19 Identities=21% Similarity=0.310 Sum_probs=9.0
Q ss_pred HHhhhHHHHHHHHHhhhhh
Q 001831 987 AVAGLTFLAFSLWRYSRRT 1005 (1008)
Q Consensus 987 ~~~~~~~~~~~~~~~~~~~ 1005 (1008)
...|+++.++.+|...||.
T Consensus 14 ~~~G~~l~~~~~~~~~~rk 32 (34)
T TIGR01167 14 LLLGLLLLGLGGLLLRKRK 32 (34)
T ss_pred HHHHHHHHHHHHHHheecc
Confidence 3344454444555544443
No 47
>COG1512 Beta-propeller domains of methanol dehydrogenase type [General function prediction only]
Probab=20.99 E-value=4.9e+02 Score=27.19 Aligned_cols=71 Identities=13% Similarity=0.134 Sum_probs=52.0
Q ss_pred HHHHHHHHhcccCCCcEEEEEccCCCHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCceEEEecCCCCceEEEEEE
Q 001831 213 DTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPPVIPKFPVPSHQEPRFSCFIESEAGGSAVIVSY 292 (1008)
Q Consensus 213 ~~l~~f~~~~y~p~n~~l~i~Gdi~d~~~~~~~i~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~ 292 (1008)
++++++.++ +...++++++=.. +.+.+++...+.|..|+...... ...+..+++.+.....+.++|
T Consensus 53 q~l~~L~~k--t~~QiaVv~vpSt-~g~~IE~ya~rlfd~W~lG~k~~-----------~dGvLLlVa~~dr~~rIevGy 118 (271)
T COG1512 53 QQLADLEQK--TGAQIAVVTVPST-GGETIEQYATRLFDKWKLGDKAQ-----------DDGVLLLVAMNDRRVRIEVGY 118 (271)
T ss_pred HHHHHHHhc--cCCeEEEEEecCC-CCCCHHHHHHHHHHhcCCCcccc-----------CCCEEEEEEcCCCeEEEEEec
Confidence 556667766 6678888888777 88899999999999997443221 234566777777788899999
Q ss_pred EcCCC
Q 001831 293 KMPVN 297 (1008)
Q Consensus 293 ~~p~~ 297 (1008)
.+.+.
T Consensus 119 GLEg~ 123 (271)
T COG1512 119 GLEGV 123 (271)
T ss_pred Ccccc
Confidence 77654
Done!