Query 001831
Match_columns 1008
No_of_seqs 275 out of 2873
Neff 10.3
Searched_HMMs 29240
Date Tue Mar 26 16:56:06 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001831.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1126-1130//hhsearch_pdb/001831hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1q2l_A Protease III; hydrolase 1.0 1 1 771.3 73.5 857 30-963 13-909 (939)
2 2fge_A Atprep2;, zinc metallop 1.0 1 1 744.6 65.9 877 13-972 18-989 (995)
3 3cww_A Insulysin, insulin-degr 1.0 1 1 715.7 72.2 866 32-964 29-937 (990)
4 3s5m_A Falcilysin; M16 metallo 1.0 1 1 698.9 59.6 905 14-972 68-1185(1193)
5 3eoq_A Putative zinc protease; 1.0 1 1 476.1 40.9 402 38-469 2-405 (406)
6 3ami_A Zinc peptidase; alpha/b 1.0 1 1 464.1 43.3 413 37-470 6-424 (445)
7 3hdi_A Processing protease; CA 1.0 1 1 455.6 40.5 403 38-469 2-405 (421)
8 1pp9_A Ubiquinol-cytochrome C 1.0 1 1 443.7 39.9 419 29-475 6-436 (446)
9 3go9_A Insulinase family prote 1.0 1 1 442.1 45.8 441 27-487 16-465 (492)
10 1hr6_B Beta-MPP, mitochondrial 1.0 1 1 437.5 41.9 419 36-478 5-439 (443)
No 1
>1q2l_A Protease III; hydrolase; 2.20A {Escherichia coli str} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1
Probab=1.00 E-value=1 Score=771.29 Aligned_cols=857 Identities=13% Similarity=0.115 Sum_probs=640.4
Q ss_pred CCCCCCCCCEEEECCCCCEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCH-HHHHHHHHHC
Q ss_conf 469999984899818996899962699885599999981358787899978259999871479889991-3699999980
Q 001831 30 ELGEQPFGVDYGRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTN-HDIIKFLESI 108 (1008)
Q Consensus 30 ~~~~~~~~i~~~~L~NGl~v~~~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ahllehl~f~gs~~~~~-~~~~~~l~~~ 108 (1008)
..+.|+..++.++|+|||+|++++++.++ .+++++++++||++|+++++|+||++|||+|+||++||. .++.++++++
T Consensus 13 ~~~~d~~~~~~~~L~NGl~v~~~~~~~~~-~~~~~l~v~~Gs~~e~~~~~GlAH~lEHmlf~Gt~~~p~~~~~~~~l~~~ 91 (939)
T 1q2l_A 13 KSDKDNRQYQAIRLDNGMVVLLVSDPQAV-KSLSALVVPVGSLEDPEAYQGLAHYLEHMSLMGSKKYPQADSLAEYLKMH 91 (939)
T ss_dssp CCTTCCCEEEEEEETTSCEEEEEECTTCS-SEEEEEEESCCGGGCCGGGTTHHHHHHHHTTSCBSSSCSTTHHHHHHHTT
T ss_pred CCCCCCCCEEEEEECCCCEEEEEECCCCC-CEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHC
T ss_conf 79888865489993699989999788988-16899996725888999998569999987806888799936599999976
Q ss_pred CCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCC-HHHHHHHHHH
Q ss_conf 452599853235678179998878999788999999999820499879278999997899998607992-1224899999
Q 001831 109 GAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEKERGAVLEEYRGNRNA-SGRMQDAHWV 187 (1008)
Q Consensus 109 g~~~g~~~na~t~~d~t~y~~~~~~~~~~~l~~~l~~l~~~~~~p~~~~~~~~~er~~i~~e~~~~~~~-~~~~~~~~~~ 187 (1008)
|+. .||+|+.|+|+|+++++++ +++.+|++|+|++.+|.|+++++++||++|.+|++++.++ ..++.+.+.+
T Consensus 92 Gg~----~NA~T~~d~T~y~~~~~~~---~l~~~L~~l~d~~~~p~f~~~~~~~Er~~v~~E~~~~~~~~~~~~~~~~~~ 164 (939)
T 1q2l_A 92 GGS----HNASTAPYRTAFYLEVEND---ALPGAVDRLADAIAEPLLDKKYAERERNAVNAELTMARTRDGMRMAQVSAE 164 (939)
T ss_dssp TCE----EEEEECSSCEEEEEEECGG---GHHHHHHHHHHHHHCBCCCSTTHHHHHHHHHHHHHHHTTSHHHHHHHHHHH
T ss_pred CCC----CEEEECCCCEEEEEEECHH---HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 995----1579889867999994789---999999999999857799989999999999999985649879999999997
Q ss_pred HHHCCCCCCCCCCCCCHHHHCC----CCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 8805999886689888777448----999999999881266897189999369997899999997634799999999989
Q 001831 188 LMMEGSKYAECLPIGLEKVIRT----VSSDTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPPVIP 263 (1008)
Q Consensus 188 ~~~~~~p~~~~~~~g~~~~i~~----it~~~l~~f~~~~y~p~n~~l~i~Gdi~d~~~~~~~i~~~f~~~~~~~~~~~~~ 263 (1008)
.+|++|||+ ++++|+.++|.+ ++.++|++||++||+|+||+|+|+||+ |+++++++++++|+.|++...+.+.+
T Consensus 165 ~~~~~~p~~-~~~~G~~~~l~~~~~~~~~~~l~~f~~~~Y~p~n~~l~v~G~~-~~~~l~~~v~~~f~~~~~~~~~~~~~ 242 (939)
T 1q2l_A 165 TINPAHPGS-KFSGGNLETLSDKPGNPVQQALKDFHEKYYSANLMKAVIYSNK-PLPELAKMAADTFGRVPNKESKKPEI 242 (939)
T ss_dssp SSCTTSGGG-SCCSCCHHHHSCBTTBCHHHHHHHHHHHHCCTTTCEEEEEESS-CHHHHHHHHHHTGGGSCCCCCCCCCC
T ss_pred HCCCCCCCC-CCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCHHHEEEEEECCC-CHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 568999976-6788999997167884599999999996158735699997499-99999999999864333588789978
Q ss_pred CCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC-C
Q ss_conf 999999999935887438887309999998388767899999999999999999999999986137999124210257-4
Q 001831 264 KFPVPSHQEPRFSCFIESEAGGSAVIVSYKMPVNELKTIKDYKEMLTESMFLHALNQRFFKLSRRKDPPYFSCSASAD-D 342 (1008)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~p~~~~~~~~~~~~~vl~~il~~~~~srL~~~lr~~~g~~~~~~~~~~-~ 342 (1008)
..+++........+..++...++.+.++|+.|... +..+..++.+++.+||++.+|+|++.+++ .|++|+++++.. .
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~-~~~~~~~~~~l~~lLg~~~~s~L~~~L~~-~gl~~~~~a~~~~~ 320 (939)
T 1q2l_A 243 TVPVVTDAQKGIIIHYVPALPRKVLRVEFRIDNNS-AKFRSKTDELITYLIGNRSPGTLSDWLQK-QGLVEGISANSDPI 320 (939)
T ss_dssp CSCSCCGGGSSEEEEECCSSCCCEEEEEEEEECCG-GGGGGCHHHHHHHHHHCCCTTSHHHHHHH-TTCEEEEEEEEESS
T ss_pred CCCCCCHHHCCEEEEEEECCCCCEEEEEEECCCHH-HHHHHCHHHHHHHHHCCCCCCCHHHHHHH-CCCCHHEEECCCCC
T ss_conf 88999978947799998278771899999768727-76654789999999568998719999987-69712124334555
Q ss_pred CCCCCCEEEEEEEECC---CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 4455528999999448---8379999999999999996799999999999999999999998310378288999999975
Q 001831 343 LVRPLKAYIMSSSCKE---RGTLKALESMLIEVARVRLHGFSEREVSVARALLMSEVESAYLERDQMQSTNLRDECLQHF 419 (1008)
Q Consensus 343 ~~~~~~~~~i~~~~~~---~~~~~~~~~i~~~l~~l~~~g~s~~el~~ak~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (1008)
...+.|.|.+++.+.+ ++.+++++.++++|++++++|++++|++++|+.+...+.... .......+..+...+
T Consensus 321 ~~~~~g~f~i~~~~~~~~~~~~~~~~~~i~~~l~~l~~~g~~~~el~~~k~~~~~~~~~~~----~~~~~~~~~~l~~~~ 396 (939)
T 1q2l_A 321 VNGNSGVLAISASLTDKGLANRDQVVAAIFSYLNLLREKGIDKQYFDELANVLDIDFRYPS----ITRDMDYVEWLADTM 396 (939)
T ss_dssp TTSSEEEEEEEEEECHHHHHTHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHSCC----CCCSHHHHHHHHHHH
T ss_pred CCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC----CCCHHHHHHHHHHHH
T ss_conf 6888518999999894666529999999999999998679859999999999872203457----788599999999986
Q ss_pred HCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCC----------------CHHHHHHHHHHH
Q ss_conf 3699756978999999788289999999999998602598089981899989----------------999999999999
Q 001831 420 LCKEPIIGIEYEARLQKTLLPHISALEVSRYSEKLQTSCSCVIKTIEPQTFS----------------TIDDLKNIVLKI 483 (1008)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~i~~it~edv~~~~~~~l~~~~~~~~~~~p~~~~----------------~~~~~~~~~~~~ 483 (1008)
... +. .+. ......++.+|+++|++++++ +.++++++++++|.... +.+.+..+....
T Consensus 397 ~~~-~~---~~~-~~~~~~i~~vt~~~i~~~~~~-l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (939)
T 1q2l_A 397 IRV-PV---EHT-LDAVNIADRYDAKAVKERLAM-MTPQNARIWYISPKEPHNKTAYFVDAPYQVDKISAQTFADWQKKA 470 (939)
T ss_dssp TTS-CG---GGT-TTTTTCCCCCCHHHHHHHHHH-CSGGGCEEEEECTTCCCCEECTTTCCEEEEEECCHHHHHHHHHHH
T ss_pred HCC-CH---HHH-HCCCHHHHCCCHHHHHHHHHH-CCHHHCEEEEECCCCCCCCCCCEECCEEEEEECCHHHHHHHHCCC
T ss_conf 508-99---997-117221310699999999984-698774899982788877334543774256308999999875468
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCEEEEEECC-CCC-CEEEEEEEEC-CCCCCC
Q ss_conf 7321049999986789622335899999556767746998299995289399997467-999-9699999956-967889
Q 001831 484 KNLEEKNISPWDEENIPEEIVSTKPSPGNIVQQFEYENLGATELVLSNGMRVCYKCTD-FLD-DQVLFTGFSY-GGLSEL 560 (1008)
Q Consensus 484 ~~~~~~~i~~~~~~~~p~~l~~~~~~~~~i~~~~~~~~~~~~~~~L~NGl~v~~~~~~-~~~-~~v~~~~~~~-gg~~~~ 560 (1008)
. ...+.++.. .++ .|....+.... ......+.++|+||++||+++++ +.. ....+.+.+. ++..+.
T Consensus 471 ~---~~~~~~p~~----n~~---~~~~~~~~~~~-~~~~~p~~~~l~ng~~v~~~~~~~f~~pp~~~i~l~~~~~~~~~~ 539 (939)
T 1q2l_A 471 A---DIALSLPEL----NPY---IPDDFSLIKSE-KKYDHPELIVDESNLRVVYAPSRYFASEPKADVSLILRNPKAMDS 539 (939)
T ss_dssp H---TCCCCCCCC----CTT---CCCCCCCCCCS-SCCSSCEEEEEETTEEEEEECCSSCTTSSEEEEEEEEECGGGGSS
T ss_pred C---CCCCCCCCC----CCC---CCCCCCCCCCC-CCCCCCEEEEECCCCEEEECCCCCCCCCCCEEEEEEEECCCCCCC
T ss_conf 6---535669997----767---88675305676-789999799977981685557875589986799999958965589
Q ss_pred CCCHHHHHCHHHHHHHHCCCCCCCHHHHHHHHCCCEEEEEEEECCEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCHHH
Q ss_conf 96013231046777621078999988999977175378988755304999986293229999999999840589999899
Q 001831 561 PESEYLSCSMGSTIAGEIGVFGYRPSMLMDMLAGKRVEGGTKVGAYMRTFSGDCSPSDLETALQLVYQLFTTNVAPGEEE 640 (1008)
Q Consensus 561 ~~~~g~~~~l~~~l~~~~g~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~ll~~~l~~p~~~~~~~ 640 (1008)
+...+.++++..++. .|+..+ .+...+.+.+.++++ .+.+.+++++.+++++.+|+++.+.+.+|.| ++++
T Consensus 540 ~~~~~~~~l~~~ll~--~g~~~~---~~~~~l~G~~~~~~~---~~g~~~~~~g~~~~l~~~l~ll~~~l~~p~~-~~~~ 610 (939)
T 1q2l_A 540 ARNQVMFALNDYLAG--LALDQL---SNQASVGGISFSTNA---NNGLMVNANGYTQRLPQLFQALLEGYFSYTA-TEDQ 610 (939)
T ss_dssp HHHHHHHHHHHHHHH--HHHHHH---HHHHHHTTEEEEEEE---SSEEEEEEEEESSSHHHHHHHHHHHHHHCCC-CSHH
T ss_pred HHHHHHHHHHHHHHH--HHHHHH---HHHHHHCCCEEEEEE---CCCEEEEEECCCHHHHHHHHHHHHHHHCCCC-CHHH
T ss_conf 999999999999999--999987---527997694899960---8957999976567699999999999747898-9999
Q ss_pred HHHHHHHHHHHHHHH-HCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCC
Q ss_conf 999999999999994-1696999999999883299976789992555117936799999632079999499999168910
Q 001831 641 VEIVMQMAEEVIRAQ-ERDPYTAFANRVKEINYGNSYFFRPIRISDLQKVDPLKACDYFNSCFKDPSTFTVVIVGNIDPS 719 (1008)
Q Consensus 641 ~~~~k~~~~~e~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~it~~~l~~~~~~~~~~~~~~~l~i~Gd~~~~ 719 (1008)
|+++|+.++.++++. .++|...+.+.+..++|++. +....+.+.+++++.+++++|+++ ++.+.+++++|+||++.+
T Consensus 611 f~~~k~~~~~~l~~~~~~~p~~~a~~~l~~~l~~~~-~~~~~~~~~l~~it~~~l~~f~~~-~~~~~~~~~~vvGn~~~~ 688 (939)
T 1q2l_A 611 LEQAKSWYNQMMDSAEKGKAFEQAIMPAQMLSQVPY-FSRDERRKILPSITLKEVLAYRDA-LKSGARPEFMVIGNMTEA 688 (939)
T ss_dssp HHHHHHHHHHHHHHHSCSCHHHHHHHHHHHTTSSSC-CCHHHHHHHGGGCCHHHHHHHHHH-HHTTCEEEEEEEESCCHH
T ss_pred HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC-CCHHHHHHHHHCCCHHHHHHHHHH-HHHHHEEEEEEECCCCHH
T ss_conf 999999999997634206839999999999966899-999999999851899999999999-986420899997598999
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEE-EEEEECCCCCCCCHHHHHHHHHHH
Q ss_conf 4089999964169998888875666778888767888640268967887762299-999632677874258679999999
Q 001831 720 NGIPLILQYLGGIPKPPEPILHFNRDNLKGLPFTFPSSIIREVVRSPMVEAQCSV-QLCFPVELKNGTMVEEINYVGFLS 798 (1008)
Q Consensus 720 ~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~~~~~~~~~iL~ 798 (1008)
++.++++++++.|+....+. . .......+.+. ...+.......++.+ .++++.+. ......+++.+|+
T Consensus 689 ~~~~l~~~~~~~l~~~~~~~-----~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~lL~ 757 (939)
T 1q2l_A 689 QATTLARDVQKQLGADGSEW-----C--RNKDVVVDKKQ-SVIFEKAGNSTDSALAAVFVPTGY---DEYTSSAYSSLLG 757 (939)
T ss_dssp HHHHHHHHHHHHHTCCCSCC-----C--CCEEECCCSCE-EEEEEECCSSSCEEEEEEEECSSC---CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCC-----C--CCCEEEECCCC-EEEEECCCCCCCCEEEEEEEECCC---CCHHHHHHHHHHH
T ss_conf 99999999999973688655-----5--45358707995-489966899987426999996699---9999999999999
Q ss_pred HHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCE-EEEEEE-EECCCCHHHHHHHHHHHHHHHHHCCCCHHHHH
Q ss_conf 9999999999862449901000666104888888898401-399999-82913289999999999998981799999999
Q 001831 799 KLLETKMMQVLRFKHGQIYSASVSVFLGGNKHSRTGDVRG-DISINF-SCDPEISFKLVDLALDEISRLQKEGPSDEDVS 876 (1008)
Q Consensus 799 ~~l~s~L~~~lRe~~gl~Y~~~~~~~~~~~~~~~~~~~~g-~~~i~~-~~~~~~~~~~~~~~~~~l~~i~~~~is~~el~ 876 (1008)
++++++||.+||+++|++|+++++...... ..| .|.|++ .++|++++++++.+.+++.++.+ +++++||+
T Consensus 758 ~~~~s~lf~~LRek~gl~Y~v~s~~~~~~~-------~~g~~~~i~s~~~~p~~~~~~i~~~~~~~~~~~~-~~t~~el~ 829 (939)
T 1q2l_A 758 QIVQPWFYNQLRTEEQLGYAVFAFPMSVGR-------QWGMGFLLQSNDKQPSFLWERYKAFFPTAEAKLR-AMKPDEFA 829 (939)
T ss_dssp HHHHHHHTHHHHTSCCSSSCEEEEEEEETT-------EEEEEEEEEESSSCHHHHHHHHHHHHHHHHHHHH-TCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCEEEEEEEECCC-------EEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH-HCCHHHHH
T ss_conf 998888899999998747155346765397-------5689999987999989999999999999999998-68999999
Q ss_pred HHHHHHHHHHHHHCCCH-----HHHHHHHHHHHCCCCCCCCCCCCHHHCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCC
Q ss_conf 99999999787200104-----8999999976213555689774000021668999822899999999997659999995
Q 001831 877 TILELEQRAHETGLQEN-----YHWLDRILCSYQSRVYSGDVGTSFKIQDEARSKVRKSLQPLTLQLALQRIMPYPCNKQ 951 (1008)
Q Consensus 877 ~ak~~~~~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~iT~edi~~~a~~~l~~~~~~~ 951 (1008)
++|..++.++....++. .+|...+...+ .++.. +.+.+.|++||++||++++++|+.++ .+
T Consensus 830 ~~k~~l~~~~~~~~~s~~~~~~~~w~~i~~~~~-------~~d~~-----~~~~~~i~~vT~~dv~~~a~~~l~~~--~~ 895 (939)
T 1q2l_A 830 QIQQAVITQMLQAPQTLGEEASKLSKDFDRGNM-------RFDSR-----DKIVAQIKLLTPQKLADFFHQAVVEP--QG 895 (939)
T ss_dssp HHHHHHHHHHTCCCSSHHHHHHHHHHHHHHTCT-------TCCHH-----HHHHHHHHTCCHHHHHHHHHHHTTSC--SS
T ss_pred HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC-------CCCHH-----HHHHHHHHCCCHHHHHHHHHHHHCCC--CC
T ss_conf 999999998617999899999999999853898-------87868-----99999986089999999999984477--77
Q ss_pred EE--EEEEECCCHH
Q ss_conf 49--9999268424
Q 001831 952 FT--VVILMPQVSR 963 (1008)
Q Consensus 952 ~~--~~i~~p~~~~ 963 (1008)
.. +.++|+....
T Consensus 896 ~~l~v~v~G~~~~~ 909 (939)
T 1q2l_A 896 MAILSQISGSQNGK 909 (939)
T ss_dssp EEEEEEECCSSHHH
T ss_pred CEEEEEEECCCCCC
T ss_conf 77999996678875
No 2
>2fge_A Atprep2;, zinc metalloprotease (insulinase family); peptidasome, protease-peptide complex, hydrolase, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1
Probab=1.00 E-value=1 Score=744.62 Aligned_cols=877 Identities=13% Similarity=0.081 Sum_probs=638.1
Q ss_pred CCCCCCCCEEECCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCC
Q ss_conf 23686323011146755469999984899818996899962699885599999981358787899978259999871479
Q 001831 13 KKHGFRSLKLVSFDLNEELGEQPFGVDYGRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSA 92 (1008)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~L~NGl~v~~~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ahllehl~f~g 92 (1008)
..++|..++.... ...+...++..+|+||++|++++++... . +|++|+++|++++.|+||++|||+|+|
T Consensus 18 ~~~~f~~~~~~~~-----~~~~~~~~~~~~l~nGl~v~~~~~~~~~-~-----~~~vg~~~e~~~~~GlAH~lEHm~f~G 86 (995)
T 2fge_A 18 EKLGFEKVSEEFI-----SECKSKAILFKHKKTGCEVMSVSNEDEN-K-----VFGVVFRTPPKDSTGIPHILQHSVLCG 86 (995)
T ss_dssp HHTTEEEEEEEEE-----TTTTEEEEEEEETTTCCEEEEEECSCSS-E-----EEEEEEECCCSSSSCHHHHHHHHTTSC
T ss_pred EECCEEEEEEEEC-----CCCCCEEEEEEECCCCCEEEEEECCCCC-C-----EEEEEECCCCCCCCCHHHHHHHHHHCC
T ss_conf 1477389998703-----2115457999997899889999769986-1-----799996789869987689999997178
Q ss_pred CCCCCHHHH-HHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCC--CHHHHHHH------
Q ss_conf 889991369-999998045259985323567817999887899978899999999982049987--92789999------
Q 001831 93 TEKYTNHDI-IKFLESIGAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRV--SKDDLEKE------ 163 (1008)
Q Consensus 93 s~~~~~~~~-~~~l~~~g~~~g~~~na~t~~d~t~y~~~~~~~~~~~l~~~l~~l~~~~~~p~~--~~~~~~~e------ 163 (1008)
|++||..++ .++++. .+|+++||+|++|+|+|++.++. .++++.+|++++|++.+|.| +++++++|
T Consensus 87 t~~~p~~~~~~~~l~~---~~g~~~NA~T~~d~T~y~~~~~~--~~~~~~~l~~~~d~~~~p~~~~~~~~~~~E~~~~e~ 161 (995)
T 2fge_A 87 SRKYPVKEPFVELLKG---SLHTFLNAFTYPDRTCYPVASTN--TKDFYNLVDVYLDAVFFPKCVDDAHTFQQEGWHYEL 161 (995)
T ss_dssp BTTBCSSCHHHHHHHH---CCEEEECCEECSSEEEEEEEESS--HHHHHHHHHHHHHHHHSBGGGTSSHHHHHHTCEEEC
T ss_pred CCCCCCCCHHHHHHHH---CCCCCCEEEECCCCEEEEEECCC--HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHC
T ss_conf 8789984679999975---51887420677983599984488--899999999999997587877998999876666404
Q ss_pred ---------HHHHHHHHHCCCC-CHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCEEEEE
Q ss_conf ---------9789999860799-212248999998805999886689888777448999999999881266897189999
Q 001831 164 ---------RGAVLEEYRGNRN-ASGRMQDAHWVLMMEGSKYAECLPIGLEKVIRTVSSDTVKRFYQKWYRLQNMAVIAV 233 (1008)
Q Consensus 164 ---------r~~i~~e~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~i~~it~~~l~~f~~~~y~p~n~~l~i~ 233 (1008)
|++|.+|++++.+ +..++.+.+.+.+|++|||+ ++++|++++|.++|.++|++||++||+|+||+|+|+
T Consensus 162 ~~~~~~~~~r~vV~~E~~~~~~~p~~~~~~~~~~~~~~~~py~-~~~~G~~~~i~~~t~~~l~~f~~~~Y~p~n~~l~v~ 240 (995)
T 2fge_A 162 NDPSEDISYKGVVFNEMKGVYSQPDNILGRIAQQALSPENTYG-VDSGGDPKDIPNLTFEEFKEFHRQYYHPSNARIWFY 240 (995)
T ss_dssp SCTTSCCEEECHHHHHHHHHTTSHHHHHHHHHHHHHCTTSGGG-SCTTCCTTTGGGCCHHHHHHHHHHHSSGGGEEEEEE
T ss_pred CCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCC-CCCCCCHHHHHHCCHHHHHHHHHHHCCCCCEEEEEE
T ss_conf 5655432122319999875048889999999999718999887-779999676321589999999998188421699998
Q ss_pred CCCCCHHHHHHHHHHHHCCCC--CCCCCCCCCCCCCCCCCCCC--E-EEEE---CCCCCCEEEEEEEECCCCCCCCHHHH
Q ss_conf 369997899999997634799--99999998999999999993--5-8874---38887309999998388767899999
Q 001831 234 GDFPDTKGVVELINTHFGQKK--SATDPPVIPKFPVPSHQEPR--F-SCFI---ESEAGGSAVIVSYKMPVNELKTIKDY 305 (1008)
Q Consensus 234 Gdi~d~~~~~~~i~~~f~~~~--~~~~~~~~~~~~~~~~~~~~--~-~~~~---~~~~~~~~v~l~~~~p~~~~~~~~~~ 305 (1008)
||+ |+++++++|+++|+.|+ +...+...+. .++ ...+. . .... ++...++.+.++|+.|....++++.+
T Consensus 241 Gd~-d~~~~~~~i~~~f~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 317 (995)
T 2fge_A 241 GDD-DPVHRLRVLSEYLDMFEASPSPNSSKIKF-QKL-FSEPVRLVEKYPAGRDGDLKKKHMLCVNWLLSEKPLDLQTQL 317 (995)
T ss_dssp ESS-CHHHHHHHHHHHHTTCCCCSHHHHSCCCC-CCC-CSSCEEEEEEEECCSSSCGGGCEEEEEEEECCSSCCCHHHHH
T ss_pred CCC-CHHHHHHHHHHHHHHCCCCCCCCCCCCCC-CCC-CCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCHHHHH
T ss_conf 699-99999999999985177545677766577-778-888705888605677887667608999997688767988989
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC-CCCCCCCCCEEEEEE-EECCCCHHHHHHHHHHHHHHHHHCCCCHH
Q ss_conf 9999999999999999999861379991242102-574445552899999-94488379999999999999996799999
Q 001831 306 KEMLTESMFLHALNQRFFKLSRRKDPPYFSCSAS-ADDLVRPLKAYIMSS-SCKERGTLKALESMLIEVARVRLHGFSER 383 (1008)
Q Consensus 306 ~~~vl~~il~~~~~srL~~~lr~~~g~~~~~~~~-~~~~~~~~~~~~i~~-~~~~~~~~~~~~~i~~~l~~l~~~g~s~~ 383 (1008)
++.+++.+|+++.+|||++.++++ |++|+++++ +... ...+.|.+.+ .+.+++.+++++.+.++|++++++|++++
T Consensus 318 a~~vl~~~Lg~~~~S~L~~~l~e~-gl~~~~~~~~~~~~-~~~~~f~i~~~~~~~~~~~~~~~~i~~~l~~l~~~g~~~~ 395 (995)
T 2fge_A 318 ALGFLDHLMLGTPASPLRKILLES-GLGEALVSSGLSDE-LLQPQFGIGLKGVSEENVQKVEELIMDTLKKLAEEGFDND 395 (995)
T ss_dssp HHHHHHHHHHSSTTSHHHHHHHHT-TSCSEECSCEEECS-SSSCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHHCCCHH
T ss_pred HHHHHHHHHCCCCCCHHHHHHHHC-CCCCCEEECCCCCC-CCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCHH
T ss_conf 999999997679987899999863-88754265153566-6670799999948887899999999999999987398999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCH--HHHHHHHHHHHCC-CCCCCHHHHHHHHHHHCCCC----CHH----HHHHHHH
Q ss_conf 99999999999999999831037828--8999999975369-97569789999997882899----999----9999999
Q 001831 384 EVSVARALLMSEVESAYLERDQMQST--NLRDECLQHFLCK-EPIIGIEYEARLQKTLLPHI----SAL----EVSRYSE 452 (1008)
Q Consensus 384 el~~ak~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~i----t~e----dv~~~~~ 452 (1008)
|++++|+.++..+... .....+. .++..++..++++ .+....... + .++.+ +.+ +|+++++
T Consensus 396 el~~ak~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~v~~~~~ 467 (995)
T 2fge_A 396 AVEASMNTIEFSLREN---NTGSFPRGLSLMLQSISKWIYDMDPFEPLKYT-E----PLKALKTRIAEEGSKAVFSPLIE 467 (995)
T ss_dssp HHHHHHHHHHHHHHHC---CCTTSCHHHHHHHHHHHHHTTTSCSSGGGCCH-H----HHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHC---CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH-H----HHHHHHHHHCCCCCHHHHHHHHH
T ss_conf 9999999999997741---57889617999999999876699967876459-9----99999987507860799999999
Q ss_pred HHCCC-CCEEEEEECCCCCC-------------------CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC--
Q ss_conf 86025-98089981899989-------------------999999999999732104999998678962233589999--
Q 001831 453 KLQTS-CSCVIKTIEPQTFS-------------------TIDDLKNIVLKIKNLEEKNISPWDEENIPEEIVSTKPSP-- 510 (1008)
Q Consensus 453 ~~l~~-~~~~~~~~~p~~~~-------------------~~~~~~~~~~~~~~~~~~~i~~~~~~~~p~~l~~~~~~~-- 510 (1008)
+|+.+ ++.++++++|+... +++++++++++... +++++..+.+....+..|.+
T Consensus 468 ~~l~~~~~~~~~~~~p~~~~~~~~~~~e~~~l~~~~~~~~~~~~~~~~~~~~~-----l~~~~~~~~~~~~~~~~p~~~~ 542 (995)
T 2fge_A 468 KLILNNSHRVTIEMQPDPEKATQEEVEEKNILEKVKAAMTEEDLAELARATEE-----LKLKQETPDPPEALRCVPSLNL 542 (995)
T ss_dssp HHTTTCCCEEEEEEEEETTHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHH-----HHHHHTSCCCHHHHTTSCCCCG
T ss_pred HHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH-----HHHHHCCCCCHHHHHHCCCCCH
T ss_conf 98157994589999838028999999999999999873899999999999999-----9998558998678874477997
Q ss_pred CCEEEEEEECCCCEEEEEECCCCEEEEEECCCCCCEEEEEEEECCCCCCCCCCHHHHHCHHHHHHHHCCCCCCCHHHHHH
Q ss_conf 95567677469982999952893999974679999699999956967889960132310467776210789999889999
Q 001831 511 GNIVQQFEYENLGATELVLSNGMRVCYKCTDFLDDQVLFTGFSYGGLSELPESEYLSCSMGSTIAGEIGVFGYRPSMLMD 590 (1008)
Q Consensus 511 ~~i~~~~~~~~~~~~~~~L~NGl~v~~~~~~~~~~~v~~~~~~~gg~~~~~~~~g~~~~l~~~l~~~~g~~~~~~~~l~~ 590 (1008)
++|.... ...+++. .+.||++|++++++. .+.+++.+++++|.. .++..+..+++.+++.. +|+++++..++.+
T Consensus 543 ~~i~~~~--~~~~~~~-~~~nG~~v~~~~~~~-~~~v~~~~~~~~~~~-~~~~~~~~~l~~~~l~~-~Gt~~~s~~el~~ 616 (995)
T 2fge_A 543 GDIPKEP--TYVPTEV-GDINGVKVLRHDLFT-NDIIYTEVVFDIGSL-KHELLPLVPLFCQSLLE-MGTKDLTFVQLNQ 616 (995)
T ss_dssp GGSCSSC--CCCCCEE-EESSSSEEEEEECCC-SSEEEEEEEEECTTS-CTTTGGGHHHHHHHHHH-SCCSSSCHHHHHH
T ss_pred HHCCCCC--CCCCCEE-EECCCCEEEEEECCC-CCEEEEEEEEECCCC-CHHHHHHHHHHHHHHHH-CCCCCCCHHHHHH
T ss_conf 6667667--8788435-640892499986698-986999999617889-97883437999999984-8998888999999
Q ss_pred HHCCCEEEEEE-----EECC-----EEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCHH-HHHHHHHHHHHHHHHHHC-C
Q ss_conf 77175378988-----7553-----0499998629322999999999984058999989-999999999999999416-9
Q 001831 591 MLAGKRVEGGT-----KVGA-----YMRTFSGDCSPSDLETALQLVYQLFTTNVAPGEE-EVEIVMQMAEEVIRAQER-D 658 (1008)
Q Consensus 591 ~l~~~g~~~~~-----~~~~-----~~~~~~~~~~~~~l~~~l~ll~~~l~~p~~~~~~-~~~~~k~~~~~e~~~~~~-~ 658 (1008)
.++...+++++ +++. +.+.+++++++++++.+|+++.+++.+|.| +++ +|+.++..++.++++... +
T Consensus 617 ~l~~~~ggl~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~l~ll~e~l~~p~f-~~~~~~~~~~~~~~~~l~~~~~~~ 695 (995)
T 2fge_A 617 LIGRKTGGISVYPLTSSVRGKDEPCSKIIVRGKSMAGRADDLFNLMNCLLQEVQF-TDQQRFKQFVSQSRARMENRLRGS 695 (995)
T ss_dssp HHHHHSSEEEEEEEEEEETTEEEEEEEEEEEEEEEGGGHHHHHHHHHHHHHHCCS-CCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHCCCEEEECCCCCCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHCCCC-CCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9997317648411454667654556269999998364199999999999973888-918999999999998788754426
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCC-------C--------HHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEECCCC-CCHH
Q ss_conf 69999999998832999767899-------9--------255511793679999963207999949999916891-0408
Q 001831 659 PYTAFANRVKEINYGNSYFFRPI-------R--------ISDLQKVDPLKACDYFNSCFKDPSTFTVVIVGNIDP-SNGI 722 (1008)
Q Consensus 659 p~~~~~~~~~~~~~~~~~~~~~~-------~--------~~~i~~it~~~l~~~~~~~~~~~~~~~l~i~Gd~~~-~~~~ 722 (1008)
+..++...+...+++.+++.... . .+.++.+ .++|++||++ ++++++++++|+||++. +++.
T Consensus 696 ~~~~A~~~~~~~~~~~~~~~~~~~gl~~~~~~~~l~~~~~e~~~~i-~~~L~~~~~~-~~~~~~~~~~v~Gd~~~~~~~~ 773 (995)
T 2fge_A 696 GHGIAAARMDAMLNIAGWMSEQMGGLSYLEFLHTLEKKVDEDWEGI-SSSLEEIRRS-LLARNGCIVNMTADGKSLTNVE 773 (995)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHH-HHHHHHHHHH-HCCSTTCEEEEEECHHHHHHHH
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHH-HHHHHHHHHH-HCCCCCCEEEEEECHHHHHHHH
T ss_conf 9999999998737946899999735999999999998654189999-9999999999-7286884899994889998899
Q ss_pred HHHHHHHCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEEC-CCCCCCCHHHHHHHHHHHHH
Q ss_conf 9999964169-998888875666778888767888640268967887762299999632-67787425867999999999
Q 001831 723 PLILQYLGGI-PKPPEPILHFNRDNLKGLPFTFPSSIIREVVRSPMVEAQCSVQLCFPV-ELKNGTMVEEINYVGFLSKL 800 (1008)
Q Consensus 723 ~~i~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~iL~~~ 800 (1008)
+.++++|+.| |....+. . +...+.+.....+..+ .....+..+++. ++.++++....++..+|++
T Consensus 774 ~~~~~~~~~l~p~~~~~~--------~--~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~~d~~al~vl~~iLg~- 840 (995)
T 2fge_A 774 KSVAKFLDLLPENPSGGL--------V--TWDGRLPLRNEAIVIP--TQVNYVGKAGNIYSTGYELDGSAYVISKHISN- 840 (995)
T ss_dssp HHHHHHHHTSCSSCSSCS--------C--CCCCCCCCCCEEEECS--CSSBEEEEEEEGGGGTCCCCTHHHHHHHHHHH-
T ss_pred HHHHHHHHHHCCCCCCCC--------C--CCCCCCCCCCEEEEEC--CCEEEEEEECCCCCCCCCCCHHHHHHHHHHCC-
T ss_conf 999999985275677777--------7--6555677654489955--74189997447778898664999999999777-
Q ss_pred HHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCEEEE-EEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
Q ss_conf 99999999862449901000666104888888898401399-99982913289999999999998981799999999999
Q 001831 801 LETKMMQVLRFKHGQIYSASVSVFLGGNKHSRTGDVRGDIS-INFSCDPEISFKLVDLALDEISRLQKEGPSDEDVSTIL 879 (1008)
Q Consensus 801 l~s~L~~~lRe~~gl~Y~~~~~~~~~~~~~~~~~~~~g~~~-i~~~~~~~~~~~~~~~~~~~l~~i~~~~is~~el~~ak 879 (1008)
++||.+||+ +|++|+++++... .|.|. ++++++| +.+++++.+.+.++.+++.+++++||+++|
T Consensus 841 --~~L~~~iRe-~g~aYg~~s~~~~-----------~G~~~~~~s~~dp-~~~~~~~~~~~~~~~l~~~~~te~el~~ak 905 (995)
T 2fge_A 841 --TWLWDRVRV-SGGAYGGFCDFDS-----------HSGVFSYLSYRDP-NLLKTLDIYDGTGDFLRGLDVDQETLTKAI 905 (995)
T ss_dssp --THHHHHTTT-TTCCSEEEEEEET-----------TTTEEEEEEESBS-CSHHHHHHHHTHHHHHHTCCCCHHHHHHHH
T ss_pred --CCCHHHHHH-CCCCCCCCEEECC-----------CCCEEEEEEECCC-CHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_conf --702788631-4877221317179-----------9568999997289-989999999999999962998999999999
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEEEEEC
Q ss_conf 99999787200104899999997621355568977400002166899982289999999999765999999549999926
Q 001831 880 ELEQRAHETGLQENYHWLDRILCSYQSRVYSGDVGTSFKIQDEARSKVRKSLQPLTLQLALQRIMPYPCNKQFTVVILMP 959 (1008)
Q Consensus 880 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~iT~edi~~~a~~~l~~~~~~~~~~~i~~p 959 (1008)
..+++++... .+...........+..+. ..+. .+.+.+.|.+||++||+++|++|+.+ + ++.+++++|+
T Consensus 906 ~~li~~~~~~-~~~~~~~~~~~~~~~~g~---~~~~-----~~~~~~~i~~vT~edv~~~a~~~~~~-~-~~~~~~vvG~ 974 (995)
T 2fge_A 906 IGTIGDVDSY-QLPDAKGYSSLLRHLLGV---TDEE-----RQRKREEILTTSLKDFKDFAQAIDVV-R-DKGVAVAVAS 974 (995)
T ss_dssp HHHHHHHTCC-CCHHHHHHHHHHHHHTTC---CHHH-----HHHHHHHHHTCCHHHHHHHHHHHHHH-H-HHCEEEEEEC
T ss_pred HHHHHHCCCC-CCHHHHHHHHHHHHHCCC---CHHH-----HHHHHHHHHCCCHHHHHHHHHHHHHH-H-CCCCEEEECC
T ss_conf 9998733688-898999999999997495---9999-----99999999829999999999999865-3-3698899889
Q ss_pred CCHHHHHH--HHHHC
Q ss_conf 84245888--86202
Q 001831 960 QVSRFKFL--RSLFR 972 (1008)
Q Consensus 960 ~~~~~~~l--~~~~~ 972 (1008)
.+.+.+.- +.+|.
T Consensus 975 ~~~i~~~~~~~~~~~ 989 (995)
T 2fge_A 975 AEDIDAANNERSNFF 989 (995)
T ss_dssp HHHHHHHHHHTTTCS
T ss_pred HHHHHHHHHHHHHHH
T ss_conf 999976241346666
No 3
>3cww_A Insulysin, insulin-degrading enzyme, insulinase; A-beta degrading enzyme, criptidase, kinins, hydrolase; 1.96A {Homo sapiens} PDB: 3ofi_A 2wc0_A 3h44_A 3n56_A 3n57_A 2wby_A 3qz2_A 3e4z_A 2wk3_A 3e4a_A* 2g47_A 2g48_A 2g49_A 2g54_A 2g56_A 2jbu_A 3e50_A 2jg4_A 3hgz_A 2yb3_A* ...
Probab=1.00 E-value=1 Score=715.71 Aligned_cols=866 Identities=14% Similarity=0.132 Sum_probs=629.6
Q ss_pred CCCCCCCEEEECCCCCEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCH-HHHHHHHHHCCC
Q ss_conf 9999984899818996899962699885599999981358787899978259999871479889991-369999998045
Q 001831 32 GEQPFGVDYGRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTN-HDIIKFLESIGA 110 (1008)
Q Consensus 32 ~~~~~~i~~~~L~NGl~v~~~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ahllehl~f~gs~~~~~-~~~~~~l~~~g~ 110 (1008)
..+...++.++|+|||+|++++++.+. .++++++|++||++||++..|+||++|||+|+||++||. .++.++++++|+
T Consensus 29 ~~d~~~~~~~~L~NGl~v~~~~~~~~~-~~~~~l~v~~Gs~~ep~~~~GlAH~lEHmlf~GT~~~p~~~~~~~~l~~~Gg 107 (990)
T 3cww_A 29 PEDKREYRGLELANGIKVLLISDPTTD-KSSAALDVHIGSLSDPPNIAGLSHFLQHMLFLGTKKYPKENEYSQFLSEHAG 107 (990)
T ss_dssp TTCCCEEEEEEETTCCEEEEEECTTCS-EEEEEEEESCCGGGSCTTSTTHHHHHHHHGGGCBSSSCSTTHHHHHHHTTTC
T ss_pred CCCCCCEEEEEECCCCEEEEEECCCCC-CEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCC
T ss_conf 888755599994799889999788998-1789999552587799999973999999880688779980569999997699
Q ss_pred CCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCC-CCHHHHHHHHHHHH
Q ss_conf 25998532356781799988789997889999999998204998792789999978999986079-92122489999988
Q 001831 111 EFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEKERGAVLEEYRGNR-NASGRMQDAHWVLM 189 (1008)
Q Consensus 111 ~~g~~~na~t~~d~t~y~~~~~~~~~~~l~~~l~~l~~~~~~p~~~~~~~~~er~~i~~e~~~~~-~~~~~~~~~~~~~~ 189 (1008)
.+||+|+.|+|+|+++++++ +++.+|++++|++.+|.|+++++++||++|.+|++++. ++..++.+.+...+
T Consensus 108 ----~~NA~T~~d~T~y~~~~~~~---~l~~~l~~~~d~~~~p~f~~~~~~~E~~~V~~E~~~~~~~~~~~~~~~~~~~~ 180 (990)
T 3cww_A 108 ----SSNAFTSGEHTNYYFDVSHE---HLEGALDRFAQFFLSPLFDESAKDREVNAVDSEHEKNVMNDAWRLFQLEKATG 180 (990)
T ss_dssp ----EEEEEECSSCEEEEEEEEGG---GHHHHHHHHHGGGTCBCCCHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHTS
T ss_pred ----CEEEEECCCCEEEEEEECHH---HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC
T ss_conf ----50689889845999993789---99999999999985758998999999999999998553883999999999856
Q ss_pred HCCCCCCCCCCCCCHHHHCCC-------CHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 059998866898887774489-------9999999988126689718999936999789999999763479999999998
Q 001831 190 MEGSKYAECLPIGLEKVIRTV-------SSDTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPPVI 262 (1008)
Q Consensus 190 ~~~~p~~~~~~~g~~~~i~~i-------t~~~l~~f~~~~y~p~n~~l~i~Gdi~d~~~~~~~i~~~f~~~~~~~~~~~~ 262 (1008)
|++|||+ ++++|++++|.++ +.++|++||++||+|+||+|+++||+ |+++++++|+++|+.|++...+.
T Consensus 181 ~~~~py~-~~~~G~~~~l~~~~~~~~~~~~~~l~~f~~~~Y~p~n~~l~v~Gd~-~~~~~~~~i~~~f~~~~~~~~~~-- 256 (990)
T 3cww_A 181 NPKHPFS-KFGTGNKYTLETRPNQEGIDVRQELLKFHSAYYSSNLMAVVVLGRE-SLDDLTNLVVKLFSEVENKNVPL-- 256 (990)
T ss_dssp CTTSGGG-CCCSCCHHHHTHHHHHTTCCHHHHHHHHHHHHCCGGGEEEEEEESS-CHHHHHHHHHHHHTTSCCCCCCC--
T ss_pred CCCCCCC-CCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHEEEEEECCC-CHHHHHHHHHHHHCCCCCCCCCC--
T ss_conf 8999963-4788989998402010465299999999997177866389998699-99999999999713786578889--
Q ss_pred CCCCC-CCCCC-CCEEEEECCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHCCCCCCEEEEEEC
Q ss_conf 99999-99999-93588743888730999999838876789999999999999999-99999999861379991242102
Q 001831 263 PKFPV-PSHQE-PRFSCFIESEAGGSAVIVSYKMPVNELKTIKDYKEMLTESMFLH-ALNQRFFKLSRRKDPPYFSCSAS 339 (1008)
Q Consensus 263 ~~~~~-~~~~~-~~~~~~~~~~~~~~~v~l~~~~p~~~~~~~~~~~~~vl~~il~~-~~~srL~~~lr~~~g~~~~~~~~ 339 (1008)
+.+.. +.... ........+...++.+.++|..|... +..+..++.++..+||+ +.++ |+..+|+ .|++|+++++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~l~~lLg~~~~~s-l~~~Lr~-~g~~~~~~a~ 333 (990)
T 3cww_A 257 PEFPEHPFQEEHLKQLYKIVPIKDIRNLYVTFPIPDLQ-KYYKSNPGHYLGHLIGHEGPGS-LLSELKS-KGWVNTLVGG 333 (990)
T ss_dssp CCCCSCSSCGGGSSEEEEECCSSSCCEEEEEEEECCCG-GGTTTCHHHHHHHHHTCCSTTC-HHHHHHH-TTSCSCEEEE
T ss_pred CCCCCCCCCHHHCCEEEEEEECCCCCEEEEEEECCCHH-HHHHHCHHHHHHHHHCCCCCCC-HHHHHHH-CCCCCEEEEC
T ss_conf 98888999967807699999878774899999768805-6555588999999956999994-8999987-7971125653
Q ss_pred CCCCCCCCCEEEEEEEECC---CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
Q ss_conf 5744455528999999448---8379999999999999996799999999999999999999998310378288999999
Q 001831 340 ADDLVRPLKAYIMSSSCKE---RGTLKALESMLIEVARVRLHGFSEREVSVARALLMSEVESAYLERDQMQSTNLRDECL 416 (1008)
Q Consensus 340 ~~~~~~~~~~~~i~~~~~~---~~~~~~~~~i~~~l~~l~~~g~s~~el~~ak~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (1008)
......+.+.|.+++.+.+ ++.+++++.++++|++++++|++++++++++......+.. ........++..+.
T Consensus 334 ~~~~~~~~~~f~i~~~~~~~g~~~~~~~~~~i~~~l~~l~~~g~~~~~l~~~~~~~~~~~~~----~~~~~~~~~~~~l~ 409 (990)
T 3cww_A 334 QKAGARGFMFFIINVDLTEEGLLHVEDIILHMFQYIQKLRAEGPQEWVFQELKDLNAVAFRF----KDKERPRGYTSKIA 409 (990)
T ss_dssp EEEEETTEEEEEEEEECCHHHHHTHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHT----CCCCCHHHHHHHHH
T ss_pred CCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC----CCCCCHHHHHHHHH
T ss_conf 56677885179999998847765499999999999999985798389999999999973666----77699799999999
Q ss_pred HHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCH-------------HHH-HHHHHH
Q ss_conf 975369975697899999978828999999999999860259808998189998999-------------999-999999
Q 001831 417 QHFLCKEPIIGIEYEARLQKTLLPHISALEVSRYSEKLQTSCSCVIKTIEPQTFSTI-------------DDL-KNIVLK 482 (1008)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~i~~it~edv~~~~~~~l~~~~~~~~~~~p~~~~~~-------------~~~-~~~~~~ 482 (1008)
..+ .+.+ +.+.. .....+..+|+++|++++++ +.+++.++++++|+..... ..+ ++.++.
T Consensus 410 ~~~-~~~~---~~~~~-~~~~~i~~~t~~~i~~~~~~-l~~~~~~~~~~~p~~~~~~~~~e~~~~~~y~~~~~~~~~~~~ 483 (990)
T 3cww_A 410 GIL-HYYP---LEEVL-TAEYLLEEFRPDLIEMVLDK-LRPENVRVAIVSKSFEGKTDRTEEWYGTQYKQEAIPDAVIAK 483 (990)
T ss_dssp HHT-TTSC---GGGTT-TTTTCCCCCCHHHHHHHHTT-CSGGGCEEEEECGGGTTCCCEECTTTCCEEEEEECCHHHHHH
T ss_pred HHH-HHCC---HHHHH-CCCHHHHCCCHHHHHHHHHH-CCHHHEEEEEECCCCCCCCCCCCCEECCEEEEECCCHHHHHH
T ss_conf 998-6279---99973-26224531899999999984-697677999973777777673331637621562389999997
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCEEEEEECC-CC--CCEEEEEEEECCCCCC
Q ss_conf 97321049999986789622335899999556767746998299995289399997467-99--9969999995696788
Q 001831 483 IKNLEEKNISPWDEENIPEEIVSTKPSPGNIVQQFEYENLGATELVLSNGMRVCYKCTD-FL--DDQVLFTGFSYGGLSE 559 (1008)
Q Consensus 483 ~~~~~~~~i~~~~~~~~p~~l~~~~~~~~~i~~~~~~~~~~~~~~~L~NGl~v~~~~~~-~~--~~~v~~~~~~~gg~~~ 559 (1008)
|.+.... ..+..+ .+.+. .|..-.+......+......+++.||++||+++++ +. ...+++.+.++++. .
T Consensus 484 ~~~~~~~--~~~~~p-~~~~~---ip~~~~~~~~~~~~~~~p~~~~~~ng~~v~~~~~~~f~~P~~~i~~~~~~~~~~-~ 556 (990)
T 3cww_A 484 WQNAALN--GKFKLP-TKNEF---IPTNFEILPLEAAATPYPALIKDTAMSKLWFKQDDKFFLPKANLNFEFFSPFAY-V 556 (990)
T ss_dssp HHTCCCC--TTCCCC-CCCTT---CCCCCCCCCCCTTCCSSCEEEEECSSEEEEEEECSSCCCSEEEEEEEEECGGGT-S
T ss_pred HHCCCCC--CCCCCC-CCCCC---CCCCCCCCCCCCCCCCCCEEEECCCCCEEEECCCCCCCCCCEEEEEEEECCCCC-C
T ss_conf 6457887--455699-98877---886650045777888999565438871675516876578868999999689777-9
Q ss_pred CCCCHHHHHCHHHHHHHHCCCCCCCHHHHHHHHCCCEEEEEEEECCEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCHH
Q ss_conf 99601323104677762107899998899997717537898875530499998629322999999999984058999989
Q 001831 560 LPESEYLSCSMGSTIAGEIGVFGYRPSMLMDMLAGKRVEGGTKVGAYMRTFSGDCSPSDLETALQLVYQLFTTNVAPGEE 639 (1008)
Q Consensus 560 ~~~~~g~~~~l~~~l~~~~g~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~ll~~~l~~p~~~~~~ 639 (1008)
.+...+.+.++..++.. .++..++...+. |.+++.+++.+.+.+++++++++++.+|+++.+++.+|.| +++
T Consensus 557 ~~~~~~~~~L~~~ll~~-----~~~~~~~~~~l~--G~~~~~~~~~~~~~~~~~g~~~~l~~~l~ll~~~l~~p~~-~~~ 628 (990)
T 3cww_A 557 DPLHSNMAYLYLELLKD-----SLNEYAYAAELA--GLSYDLQNTIYGMYLSVKGYNDKQPILLKKIIEKMATFEI-DEA 628 (990)
T ss_dssp SHHHHHHHHHHHHHHHH-----HHHHHHHHHHHT--TEEEEEEEETTEEEEEEEEESTTHHHHHHHHHHHHHTCCC-CHH
T ss_pred CHHHHHHHHHHHHHHHH-----HHHHHHHHHHHC--CEEEEEEECCCEEEEEEEECCHHHHHHHHHHHHHHHCCCC-CHH
T ss_conf 99999999999999999-----987864489868--7489999768759999984218689999999999865898-999
Q ss_pred HHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEECCCC
Q ss_conf 999999999999999416-9699999999988329997678999255511793679999963207999949999916891
Q 001831 640 EVEIVMQMAEEVIRAQER-DPYTAFANRVKEINYGNSYFFRPIRISDLQKVDPLKACDYFNSCFKDPSTFTVVIVGNIDP 718 (1008)
Q Consensus 640 ~~~~~k~~~~~e~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~it~~~l~~~~~~~~~~~~~~~l~i~Gd~~~ 718 (1008)
+|+.++..+...+++... +|...+...+...+++ +++....+.+.+++++.+++++|+++.| ++.+++++|+||++.
T Consensus 629 ~f~~~k~~~~~~~~~~~~~~p~~~a~~~~~~~l~~-~~~~~~~~~~~l~~lt~~~l~~~~~~~~-~~~~~~~~v~Gn~~~ 706 (990)
T 3cww_A 629 RFEIIKEAYMRSLNNFRAEQPHQHAMYYLRLLMTE-VAWTKDELKEALADVTLPRLKAFIPQLL-SRLHIEALLHGNITK 706 (990)
T ss_dssp HHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHBS-SCCCHHHHHHHHTTCCHHHHHHHHHHHH-HEEEEEEEEEESCCH
T ss_pred HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC-CCCCHHHHHHHHHCCCHHHHHHHHHHHH-HHHEEEEEEECCCCH
T ss_conf 99999999999988666248599999999999678-9999999999885299999999999998-641189999758899
Q ss_pred CCHHHH---HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCHHHHHHHH
Q ss_conf 040899---99964169998888875666778888767888640268967887762299999632677874258679999
Q 001831 719 SNGIPL---ILQYLGGIPKPPEPILHFNRDNLKGLPFTFPSSIIREVVRSPMVEAQCSVQLCFPVELKNGTMVEEINYVG 795 (1008)
Q Consensus 719 ~~~~~~---i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 795 (1008)
+++.++ +.++|+.+|........ .......+..+.+.............++.+.++++.+.. + .....++.
T Consensus 707 ~~~~~~~~~~~~~l~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~-~~~~~~l~ 780 (990)
T 3cww_A 707 QAALGIMQMVEDTLIEHAHTKPLLPS---QLAAYREVQLPDRGWFVYQQRNEVHNNSGIEIYYQTDMQ--S-TSENMFLE 780 (990)
T ss_dssp HHHHHHHHHHHHHHHHHHCCEECCGG---GCCCCCBBCCCTTEEEEEEEECSSCSSEEEEEEEEEEEC--C-HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCHH---HCCCCCEEECCCCCEEEEEECCCCCCCCEEEEEEECCCC--C-HHHHHHHH
T ss_conf 99999999999998346777887433---313354488389986999706888888379999967999--9-99999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHH
Q ss_conf 99999999999998624499010006661048888888984013999998291328999999999999898179999999
Q 001831 796 FLSKLLETKMMQVLRFKHGQIYSASVSVFLGGNKHSRTGDVRGDISINFSCDPEISFKLVDLALDEISRLQKEGPSDEDV 875 (1008)
Q Consensus 796 iL~~~l~s~L~~~lRe~~gl~Y~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~~l~~i~~~~is~~el 875 (1008)
+|+.+|+++||.+||++.|++|+++++....... ....|.++++++|+++++.++.+.+++..+.+ +++++||
T Consensus 781 ll~~il~~~lf~~LRek~~lgY~v~s~~~~~~g~------~~~~~~vqs~~dp~~~~~~i~~f~~~~~~l~~-~~te~el 853 (990)
T 3cww_A 781 LFAQIISEPAFNTLRTKEQLGYIVFSGPRRANGI------QGLRFIIQSEKPPHYLESRVEAFLITMEKSIE-DMTEEAF 853 (990)
T ss_dssp HHHHHHHHHHHHHHTTTTCCCSEEEEEEEEETTE------EEEEEEEEESSCHHHHHHHHHHHHHHHHHHHH-HSCHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCE------EEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH-HCCHHHH
T ss_conf 9999988899999871127757998887863897------88999993799999999999999999999998-5699999
Q ss_pred HHHHHHHHHHHHHHCCC-----HHHHHHHHHHHHCCCCCCCCCCCCHHHCHHHHHHHHHCCCHHHHHHHHHHHCCC--CC
Q ss_conf 99999999978720010-----489999999762135556897740000216689998228999999999976599--99
Q 001831 876 STILELEQRAHETGLQE-----NYHWLDRILCSYQSRVYSGDVGTSFKIQDEARSKVRKSLQPLTLQLALQRIMPY--PC 948 (1008)
Q Consensus 876 ~~ak~~~~~~~~~~~~~-----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~iT~edi~~~a~~~l~~--~~ 948 (1008)
+++|..+++++....++ ..+|...+...+ .++. .+.+.+.|++||++||++++++++.+ ..
T Consensus 854 ~~~k~~li~~~~~~~~~~~~~~~~~~~~i~~~~~-------~~d~-----~~~~~~~i~~vT~~di~~~a~~~l~~~~~~ 921 (990)
T 3cww_A 854 QKHIQALAIRRLDKPKKLSAESAKYWGEIISQQY-------NFDR-----DNTEVAYLKTLTKADIIKFYKEMLAVDAPR 921 (990)
T ss_dssp HHHHHHHHHHHHCCCSSHHHHHHHHHHHHHTTCC-------CTTH-----HHHHHHHHTTCCHHHHHHHHHHHTSTTCTT
T ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC-------CCCH-----HHHHHHHHHHCCHHHHHHHHHHHHHCCCCC
T ss_conf 9999999998517998899999999999974898-------8776-----799999998289999999999986036887
Q ss_pred CCCEEEEEEECCCHHH
Q ss_conf 9954999992684245
Q 001831 949 NKQFTVVILMPQVSRF 964 (1008)
Q Consensus 949 ~~~~~~~i~~p~~~~~ 964 (1008)
..+.+++++|+++...
T Consensus 922 ~~~~~v~v~g~~~~~~ 937 (990)
T 3cww_A 922 RHKVSVHVLAREMDSN 937 (990)
T ss_dssp CEEEEEEEECTTC---
T ss_pred CCEEEEEEECCCCCCC
T ss_conf 7779999977787533
No 4
>3s5m_A Falcilysin; M16 metalloprotease, peptidase, hydrolase; 1.55A {Plasmodium falciparum} PDB: 3s5i_A 3s5k_A 3s5h_A
Probab=1.00 E-value=1 Score=698.87 Aligned_cols=905 Identities=12% Similarity=0.061 Sum_probs=627.3
Q ss_pred CCCCCCCEEECCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCC
Q ss_conf 36863230111467554699999848998189968999626998855999999813587878999782599998714798
Q 001831 14 KHGFRSLKLVSFDLNEELGEQPFGVDYGRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSAT 93 (1008)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~L~NGl~v~~~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ahllehl~f~gs 93 (1008)
.++|..++.... ...+...++..+|+||++|++++++.+. .+. .+|.+|++.|+++..|+||++|||+|+||
T Consensus 68 ~~~f~~~~~~~~-----p~~~~~~~~~~~l~nGl~vl~i~~~~~~-~~~--~~f~vg~~tep~~~~GvAH~lEHmlf~GS 139 (1193)
T 3s5m_A 68 HNSYDIIEKRYN-----EEFKMTYTVYQHKKAKTQVISLGTNDPL-DVE--QAFAFYVKTLTHSGKGIPHILEHSVLSGS 139 (1193)
T ss_dssp CTTEEEEEEEEE-----TTTTEEEEEEEETTTCCEEEEEEECCTT-CCC--EEEEEEEECCCSSSSCHHHHHHHHTTSCB
T ss_pred CCCEEEEEECCC-----CCCCCCCEEEEECCCCCEEEEEECCCCC-EEE--EEEEEEECCCCCCCCHHHHHHHHHHHCCC
T ss_conf 588689984058-----8766652699997999889999989987-078--99999978999997119999999983799
Q ss_pred CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHH--HHHH--------
Q ss_conf 899913699999980452599853235678179998878999788999999999820499879278--9999--------
Q 001831 94 EKYTNHDIIKFLESIGAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDD--LEKE-------- 163 (1008)
Q Consensus 94 ~~~~~~~~~~~l~~~g~~~g~~~na~t~~d~t~y~~~~~~~~~~~l~~~l~~l~~~~~~p~~~~~~--~~~e-------- 163 (1008)
++||..++...++..+ +|+++||+|+.|+|+|+++++. .++++.+|+++.|++++|.|++++ |.+|
T Consensus 140 ~k~p~~e~~~~l~~~s--lG~~lNA~T~~D~T~Y~~~~~~--~~~l~~~L~l~~D~v~~P~l~~~~~~F~qE~~~~E~e~ 215 (1193)
T 3s5m_A 140 KNYNYKNSIGLLEKGT--LHTHLNAYTFNDRTVYMAGSMN--NKDFFNIMGVYMDSVFQPNVLENKYIFETEGWTYEVEK 215 (1193)
T ss_dssp TTBCCTTHHHHHHHSC--CEEEEEEEECSSEEEEEEEESS--HHHHHHHHHHHHHHHHSBGGGTCHHHHHHHTCEEEEEE
T ss_pred CCCCHHHHHHHHHHHC--CCCEEEEEECCCEEEEEEEECC--HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHC
T ss_conf 8988566999999754--4824876876875999999457--88899999999999858787632110224566654311
Q ss_pred ---------------------HHHHHHHHHCCCCCH-HHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHH
Q ss_conf ---------------------978999986079921-2248999998805999886689888777448999999999881
Q 001831 164 ---------------------RGAVLEEYRGNRNAS-GRMQDAHWVLMMEGSKYAECLPIGLEKVIRTVSSDTVKRFYQK 221 (1008)
Q Consensus 164 ---------------------r~~i~~e~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~g~~~~i~~it~~~l~~f~~~ 221 (1008)
|++|.+|+++..+++ ..+.+.+.+.+|++|||+ ++++|++++|.++|.++|++||++
T Consensus 216 ~~~~Er~~~~~~~~~~~~l~~k~vV~~E~k~~~~~p~~~~~~~l~~~lf~~hpY~-~~~~G~~e~I~~lt~edl~~F~~~ 294 (1193)
T 3s5m_A 216 LKEDEKGKAEIPQMKDYKVSFNGIVYNEMKGALSSPLEDLYHEEMKYMFPDNVHS-NNSGGDPKEITNLTYEEFKEFYYK 294 (1193)
T ss_dssp CCTTTTTCTTSCEETTEEEEEECHHHHHHHHHTTCHHHHHHHHHHHHHCTTSGGG-SCTTCCHHHHTTCCHHHHHHHHHH
T ss_pred CCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCC-CCCCCCHHHHHHCCHHHHHHHHHH
T ss_conf 1001101222222221004589999999997558999999999999857999998-899999999851899999999998
Q ss_pred CCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCC--CCCCCCCCCCCCCEEEEE---CCCCCCEEEEEEEECCC
Q ss_conf 2668971899993699978999999976347999999999--899999999999358874---38887309999998388
Q 001831 222 WYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPPV--IPKFPVPSHQEPRFSCFI---ESEAGGSAVIVSYKMPV 296 (1008)
Q Consensus 222 ~y~p~n~~l~i~Gdi~d~~~~~~~i~~~f~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~---~~~~~~~~v~l~~~~p~ 296 (1008)
||+|+||+|+++||+ |++++.++++++|+.|+....+.. .+....+....++..... ..+..++.+.++|+.|+
T Consensus 295 ~Y~P~Na~l~v~Gdi-d~~~~~~~v~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~q~~l~~~~~~~~ 373 (1193)
T 3s5m_A 295 NYNPKKVKVFFFSKN-NPTELLNFVDQYLGQLDYSKYRDDAVESVEYQTYKKGPFYIKKKYGDHSEEKENLVSVAWLLNP 373 (1193)
T ss_dssp HSCTTTCEEEEEESS-CTHHHHHHHHHHHTTCCGGGCCCCCCCCCCCCBCCCCCEEEEEEEECCCSSCCEEEEEEEESSC
T ss_pred HCCCCCEEEEEEECC-CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEECC
T ss_conf 609566699999268-8999999999986058877777666666677787788869999468999865138999998267
Q ss_pred C---CCC-----------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE-ECCCCC
Q ss_conf 7---678-----------------------------9999999999999999999999998613799912421-025744
Q 001831 297 N---ELK-----------------------------TIKDYKEMLTESMFLHALNQRFFKLSRRKDPPYFSCS-ASADDL 343 (1008)
Q Consensus 297 ~---~~~-----------------------------~~~~~~~~vl~~il~~~~~srL~~~lr~~~g~~~~~~-~~~~~~ 343 (1008)
. ..+ .++.+++.+++.+|+++.+|||++.+++ .|++|+++ +++...
T Consensus 374 ~~~~~~d~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~d~~al~vL~~iLggg~sSrL~~~L~e-~gLa~~v~~~~~~~~ 452 (1193)
T 3s5m_A 374 KVDKTNNHNNNHSNNQSSENNGYSNGSHSSDLSLENPTDYFVLLIINNLLIHTPESVLYKALTD-CGLGNNVIDRGLNDS 452 (1193)
T ss_dssp BCC----------------------CCCCSTTCCCSHHHHHHHHHHHHHHHSSTTSHHHHHHHH-HCSCSEEEEEEEECS
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHH-CCCEEEECCCCCCCC
T ss_conf 5444445322344310001111123321112245686279999999999779998779999996-698035466545655
Q ss_pred CCCCCEEEEEEE-ECCCC--------H-HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
Q ss_conf 455528999999-44883--------7-9999999999999996799999999999999999999998310378288999
Q 001831 344 VRPLKAYIMSSS-CKERG--------T-LKALESMLIEVARVRLHGFSEREVSVARALLMSEVESAYLERDQMQSTNLRD 413 (1008)
Q Consensus 344 ~~~~~~~~i~~~-~~~~~--------~-~~~~~~i~~~l~~l~~~g~s~~el~~ak~~~~~~~~~~~~~~~~~~~~~~~~ 413 (1008)
...+.|.+.+. +.+++ . +++.+.|.++|++++++||+++|++++++++...+... +.+......+..
T Consensus 453 -~~~~~f~i~~~g~~~~~~~~~~~~~~~~~~~~~I~~~L~~l~~~gi~~~ele~a~~~le~~~re~--~~~~~~gl~~~~ 529 (1193)
T 3s5m_A 453 -LVQYIFSIGLKGIKRNNEKIKNFDKVHYEVEDVIMNALKKVVKEGFNKSAVEASINNIEFILKEA--NLKTSKSIDFVF 529 (1193)
T ss_dssp -SSSCEEEEEEEEECTTCTTCSCGGGHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH--TTSTTHHHHHHH
T ss_pred -CCCCEEEEEEECCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC--CCCCCCHHHHHH
T ss_conf -67868999996578343145310248999999999999999872989999999999999987751--379970999999
Q ss_pred HHHHHHHC-CCCCCCHHHHHHHHHHHCCCC---CHHHHHHHHHHHCC-CCCEEEEEECCCCC------------------
Q ss_conf 99997536-997569789999997882899---99999999998602-59808998189998------------------
Q 001831 414 ECLQHFLC-KEPIIGIEYEARLQKTLLPHI---SALEVSRYSEKLQT-SCSCVIKTIEPQTF------------------ 470 (1008)
Q Consensus 414 ~~~~~~~~-~~~~~~~~~~~~~~~~~i~~i---t~edv~~~~~~~l~-~~~~~~~~~~p~~~------------------ 470 (1008)
.++..|++ |++.....+... .+.++.. .+.++++++++||. +++.+++++.|+..
T Consensus 530 ~~~~~w~~~~dp~~~l~~~~~--l~~l~~~~~~~~~~~~~li~~yll~n~~~~~~~~~P~~~~~~~~~~~e~~~L~~~~~ 607 (1193)
T 3s5m_A 530 EMTSKLNYNRDPLLIFEFEKY--LNIVKNKIKNEPMYLEKFVEKHFINNAHRSVILLEGDENYAQEQENLEKQELKKRIE 607 (1193)
T ss_dssp HHHHHHHTTCCTTTTTSHHHH--HHHHHHHHHHSTTHHHHHHHHHTTTCCCEEEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCHHHHHHHHHH--HHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHH
T ss_conf 987887807998998778999--999999861084999999999833499638999972887778999999999999986
Q ss_pred -CCHHHHHHHHHHHHHHHC-CC-CCCCC-CCCCCCCCCCCCCCC-CCEEEEE-EECCCC---------------------
Q ss_conf -999999999999973210-49-99998-678962233589999-9556767-746998---------------------
Q 001831 471 -STIDDLKNIVLKIKNLEE-KN-ISPWD-EENIPEEIVSTKPSP-GNIVQQF-EYENLG--------------------- 523 (1008)
Q Consensus 471 -~~~~~~~~~~~~~~~~~~-~~-i~~~~-~~~~p~~l~~~~~~~-~~i~~~~-~~~~~~--------------------- 523 (1008)
.++++++++.++...... ++ ....+ ...+|.--+++.|.. ..+.... ......
T Consensus 608 ~ls~~~~~~i~~~~~~L~~~q~~~~~~e~l~~lP~l~~~Di~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 687 (1193)
T 3s5m_A 608 NFNEQEKEQVIKNFEELSKYKNAEESPEHLNKFPIISISDLNKKTLEVPVNVYFTNINENNNIMETYNKLKTNEHMLKDN 687 (1193)
T ss_dssp HCCHHHHHHHHHHHHHHHHHHHCCCCHHHHTTSCCCCGGGSCSSCCCCCCEEEEECTTTCSCHHHHHHHHHTCHHHHHHH
T ss_pred HCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 38999999999999999998737797546974784709876887666763011222221122100011111111112221
Q ss_pred -------------------------E-----EEEEECCCCEEEEEECCCCCCEEEEEEEECCCCCCCC-CCHHHHHCHHH
Q ss_conf -------------------------2-----9999528939999746799996999999569678899-60132310467
Q 001831 524 -------------------------A-----TELVLSNGMRVCYKCTDFLDDQVLFTGFSYGGLSELP-ESEYLSCSMGS 572 (1008)
Q Consensus 524 -------------------------~-----~~~~L~NGl~v~~~~~~~~~~~v~~~~~~~gg~~~~~-~~~g~~~~l~~ 572 (1008)
. .+.+..||++|++++.++. +.+++++++..+. .+ +..+...++..
T Consensus 688 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~TN-GIvY~~l~fdl~~--l~~e~l~yl~Lf~~ 764 (1193)
T 3s5m_A 688 MDVFLKKYVLKNDKHNTNNNNNNNNNMDYSFTETKYEGNVPILVYEMPTT-GIVYLQFVFSLDH--LTVDELAYLNLFKT 764 (1193)
T ss_dssp HHHHHHHHTTC---------------------CCTTTTCEEEEEEECCCT-TEEEEEEEEECTT--CCHHHHTTHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCC-CEEEEEEEEECCC--CCHHHHHHHHHHHH
T ss_conf 10000000012222222322222332222221113449837999987999-8699999987999--99788756999999
Q ss_pred HHHHHCCCCCCCHHHHHHHHCCCEEEEEEEEC----------------CEEEEEEEECCHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 77621078999988999977175378988755----------------30499998629322999999999984058999
Q 001831 573 TIAGEIGVFGYRPSMLMDMLAGKRVEGGTKVG----------------AYMRTFSGDCSPSDLETALQLVYQLFTTNVAP 636 (1008)
Q Consensus 573 ~l~~~~g~~~~~~~~l~~~l~~~g~~~~~~~~----------------~~~~~~~~~~~~~~l~~~l~ll~~~l~~p~~~ 636 (1008)
+ +...||++++..++...++..+++++++++ ..++.+++.|+.++++.+++++.+++.+|.|.
T Consensus 765 ~-L~~lGT~~~sy~el~~~i~~~tGGis~s~~~~~~~~~~~~~~~~~~~~~~~vs~kaL~~n~~~~~~Ll~eiL~~~~F~ 843 (1193)
T 3s5m_A 765 L-ILENKTNKRSSEDFVILREKNIGSMSANVALYSKDDHLNVTDKYNAQALFNLEMHVLSHKCNDALNIALEAVKESDFS 843 (1193)
T ss_dssp H-TTTCCBSSSCHHHHHHHHHHHCSEEEEEEEEECCCBTTBCCCTTCCEEEEEEEEEEEGGGHHHHHHHHHHHHHSBCTT
T ss_pred H-HHHCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEHHHCHHHHHHHHHHHHHCCCCC
T ss_conf 9-984799999999999999985885588766503655445566556564699999974426999999999998579999
Q ss_pred CHHHHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHCCCCCCCCC---------CC------HHHHHCCCHHHHHHHHHH
Q ss_conf 9899999999999999994169-6999999999883299976789---------99------255511793679999963
Q 001831 637 GEEEVEIVMQMAEEVIRAQERD-PYTAFANRVKEINYGNSYFFRP---------IR------ISDLQKVDPLKACDYFNS 700 (1008)
Q Consensus 637 ~~~~~~~~k~~~~~e~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~---------~~------~~~i~~it~~~l~~~~~~ 700 (1008)
+++++..+.....+.+.+...+ +...+...+...+.+.+++... +. .++++.+ .++|++++++
T Consensus 844 d~eRlk~ll~~~ks~le~~i~~sGH~~A~~ra~s~~s~~~~~~e~~~Gl~~~~fl~~l~~~~e~~~~~l-~~~L~~i~~~ 922 (1193)
T 3s5m_A 844 NKKKVIDILKRKINGMKTTFSEKGYAILMKYVKAHLNSKHYAHNIIYGYENYLKLQEQLELAENDFKTL-ENILVRIRNK 922 (1193)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTTTTCHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHH-HHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
T ss_conf 689999999999998873142466899999999864750223442078579999999998667559999-9999999999
Q ss_pred HHCCCCCCEEEEEECCC-CCCHHHHHHHHHCCCCC----CCCCCCCCCCCCCCC-----------CCCCCCCCCCEEEEE
Q ss_conf 20799994999991689-10408999996416999----888887566677888-----------876788864026896
Q 001831 701 CFKDPSTFTVVIVGNID-PSNGIPLILQYLGGIPK----PPEPILHFNRDNLKG-----------LPFTFPSSIIREVVR 764 (1008)
Q Consensus 701 ~~~~~~~~~l~i~Gd~~-~~~~~~~i~~~~~~l~~----~~~~~~~~~~~~~~~-----------~~~~~p~~~~~~~~~ 764 (1008)
+++++|+.+.++|+.+ .+++.+.++++++.|+. ......+.......+ .....+.......+.
T Consensus 923 -if~~~nl~vsvtg~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 1001 (1193)
T 3s5m_A 923 -IFNKKNLMVSVTSDYGALKHLFVNSNESLKNLVSYFEENDKYINDMQNKVNDPTVMGWNEEIKSKKLFDEEKVKKEFFV 1001 (1193)
T ss_dssp -HSCSTTEEEEEEECGGGTHHHHTTTHHHHHHHHHHHHHGGGGSCCCCSSSCCCCCCCHHHHHHHTTCCCTTCCEEEEEE
T ss_pred -HCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
T ss_conf -8187883999994765699999999999975121025566432222233445443322222233222355555550674
Q ss_pred CCCCCCCEEEEEEEEC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCEEEEEE
Q ss_conf 7887762299999632-677874258679999999999999999986244990100066610488888889840139999
Q 001831 765 SPMVEAQCSVQLCFPV-ELKNGTMVEEINYVGFLSKLLETKMMQVLRFKHGQIYSASVSVFLGGNKHSRTGDVRGDISIN 843 (1008)
Q Consensus 765 ~~~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~iL~~~l~s~L~~~lRe~~gl~Y~~~~~~~~~~~~~~~~~~~~g~~~i~ 843 (1008)
.+ ..++++..+++. +..++++.+..++..+|| +++||.+|||+.| +|++++++. ..|.|.++
T Consensus 1002 ~p--~~v~yv~~~~~~~~~~~~d~~al~Vl~~iLg---~~~L~~eIREkgG-AYg~~s~~~-----------~~G~f~~~ 1064 (1193)
T 3s5m_A 1002 LP--TFVNSVSMSGILFKPGEYLDPSFTVIVAALK---NSYLWDTVRGLNG-AYGVFADIE-----------YDGSVVFL 1064 (1193)
T ss_dssp CC--CSSBEEEEEEECSCTTCBCCTHHHHHHHHHH---HTHHHHHHTTTTC-CSEEEEEEC-----------TTSEEEEE
T ss_pred CC--CCCEEEEEEECCCCCCCCCHHHHHHHHHHHC---CCHHHHHHHHCCC-EEEEEEECC-----------CCCCEEEE
T ss_conf 27--8646999972477779876099999999978---2477999976187-268877616-----------78867999
Q ss_pred EEECCCCHHHHHHHHHHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHCH
Q ss_conf 982913289999999999998981--799999999999999997872001048999999976213555689774000021
Q 001831 844 FSCDPEISFKLVDLALDEISRLQK--EGPSDEDVSTILELEQRAHETGLQENYHWLDRILCSYQSRVYSGDVGTSFKIQD 921 (1008)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~l~~i~~--~~is~~el~~ak~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 921 (1008)
.+++| +..+.++++.++++.+++ ++++++||+++|..+++++..+. ++...+..+...+..++ ..+. .
T Consensus 1065 syrdp-~~~~tl~~~~~~~~~l~~~~~~~teeEL~~ak~~~~~~~d~p~-~p~~~a~~~~~~~~~Gl---~~d~-----~ 1134 (1193)
T 3s5m_A 1065 SARDP-NLEKTLATFRESAKGLRKMADTMTENDLLRYIINTIGTIDKPR-RGIELSKLSFLRLISNE---SEQD-----R 1134 (1193)
T ss_dssp EESBS-CSHHHHHHHHTHHHHHHHHHHHCCHHHHHHHHHHHHHHHSCCC-CTHHHHHHHHHHHHTTC---CHHH-----H
T ss_pred EEECC-CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC-CHHHHHHHHHHHHHCCC---CHHH-----H
T ss_conf 98079-8799999999999999963589899999999999983666668-96999999999998195---9999-----9
Q ss_pred HHHHHHHHCCCHHHHHHHHHHHCCCCCC-CCEEEEEEECCCHHHHHHHHHHC
Q ss_conf 6689998228999999999976599999-95499999268424588886202
Q 001831 922 EARSKVRKSLQPLTLQLALQRIMPYPCN-KQFTVVILMPQVSRFKFLRSLFR 972 (1008)
Q Consensus 922 ~~~~~~i~~iT~edi~~~a~~~l~~~~~-~~~~~~i~~p~~~~~~~l~~~~~ 972 (1008)
+++++.|.+||++||+++|++|+.+ .. ++.+++++||...+.+.+..+.-
T Consensus 1135 ~~~~~~I~aVT~edv~~vA~~~~~~-l~~~~~~~vvvG~~~~i~~~l~~~~~ 1185 (1193)
T 3s5m_A 1135 VEFRKRIMNTKKEDFYKFADLLESK-VNEFEKNIVIITTKEKANEYIANVDG 1185 (1193)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHHHT-HHHHTTEEEEEECHHHHHHHHHHTCT
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHH-HCCCCCEEEEECCHHHHHHHHHHCCC
T ss_conf 9999999809999999999998513-21367369998588885357764687
No 5
>3eoq_A Putative zinc protease; two similar domains of beta(2)-alpha(2)-beta(2)-alpha(5)- beta structure, hydrolase; 2.29A {Thermus thermophilus}
Probab=1.00 E-value=1 Score=476.10 Aligned_cols=402 Identities=16% Similarity=0.152 Sum_probs=348.5
Q ss_pred CEEEECCCCCEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
Q ss_conf 48998189968999626998855999999813587878999782599998714798899913699999980452599853
Q 001831 38 VDYGRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDIIKFLESIGAEFGACQN 117 (1008)
Q Consensus 38 i~~~~L~NGl~v~~~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ahllehl~f~gs~~~~~~~~~~~l~~~g~~~g~~~n 117 (1008)
+++.+|+||++|++.+++..+ .+++++++++|+++|++++.|+||++|||+|+||++|+..++.+.++.+|+. +|
T Consensus 2 ~~~~~L~NGl~v~~~~~~~~~-~~~~~l~~~~Gs~~e~~~~~G~ah~lehmlf~Gt~~~~~~~~~~~l~~~G~~----~n 76 (406)
T 3eoq_A 2 FREAELRNGLRVIAEVVPGAR-SVALGYFVKTGARDETKEESGVSHFLEHMVFKGPEDMDALAVNRAFDRMGAQ----YN 76 (406)
T ss_dssp EEEEECTTSCEEEEEECTTCS-CEEEEEEESCSGGGSCGGGTTHHHHHHHHHTTCCTTCCHHHHHHHHHHTTCE----EE
T ss_pred CEEEECCCCCEEEEEECCCCC-EEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC----CC
T ss_conf 646986899989999879997-6999999854257889998889999999871799999989999999984887----35
Q ss_pred CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCC-CHHHHHHHHHHHHHCCCCCC
Q ss_conf 23567817999887899978899999999982049987927899999789999860799-21224899999880599988
Q 001831 118 AVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEKERGAVLEEYRGNRN-ASGRMQDAHWVLMMEGSKYA 196 (1008)
Q Consensus 118 a~t~~d~t~y~~~~~~~~~~~l~~~l~~l~~~~~~p~~~~~~~~~er~~i~~e~~~~~~-~~~~~~~~~~~~~~~~~p~~ 196 (1008)
|+|++|+|+|+++++++ +++.+|++++|++ +|.|+++++++||+++.+|+++..+ +..++.+.+.+.+|++|||+
T Consensus 77 a~t~~d~t~y~~~~~~~---~l~~~l~ll~d~~-~p~f~~~~~~~ek~~v~~e~~~~~~~p~~~~~~~~~~~~~~~~p~~ 152 (406)
T 3eoq_A 77 AFTSEEATVYYGAVLPE---FAYDLLGLFAKLL-RPALREEDFQTEKLVILEEIARYQDRPGFMAYEWARARFFQGHPLG 152 (406)
T ss_dssp EEECSSCEEEEEEECGG---GHHHHHHHHHHHT-SCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTTCGGG
T ss_pred CEECCCEEEEEEEECHH---HHHHHHHHHHHHH-CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCC
T ss_conf 26447748999995578---8999999999985-6899989999999999999987429978999999999843899998
Q ss_pred CCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 66898887774489999999998812668971899993699978999999976347999999999899999999999358
Q 001831 197 ECLPIGLEKVIRTVSSDTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPPVIPKFPVPSHQEPRFS 276 (1008)
Q Consensus 197 ~~~~~g~~~~i~~it~~~l~~f~~~~y~p~n~~l~i~Gdi~d~~~~~~~i~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (1008)
++++|+.++|.+++.++|++||++||+|+||+|+++||+ |+++++++++++|+.|+..+.+.. .++.....+..
T Consensus 153 -~~~~G~~~~i~~~t~~~l~~f~~~~y~p~n~~l~v~Gd~-~~~~~~~~i~~~f~~~~~~~~~~~----~~~~~~~~~~~ 226 (406)
T 3eoq_A 153 -NSVLGTRESITALTREGMAAYHRRRYLPKNMVLAATGRV-DFDRLLAEAERLTEAWPEGEAERA----YPPLTPAFGVE 226 (406)
T ss_dssp -CCSSCCHHHHHHCCHHHHHHHHHHHCCGGGEEEEEEESC-CHHHHHHHHHHHHTTCCCCCCCCC----CCCCCCCCEEE
T ss_pred -CCCCCCHHHHHHCCHHHHHHHHHHHCCCCCEEEEEECCC-CHHHHHHHHHHHHCCCCCCCCCCC----CCCCCCCCCEE
T ss_conf -888689999963899999999998488667799998489-999999999998357887888988----89878888469
Q ss_pred EEECCCC-CCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEEE
Q ss_conf 8743888-730999999838876789999999999999999999999998613799912421025744455528999999
Q 001831 277 CFIESEA-GGSAVIVSYKMPVNELKTIKDYKEMLTESMFLHALNQRFFKLSRRKDPPYFSCSASADDLVRPLKAYIMSSS 355 (1008)
Q Consensus 277 ~~~~~~~-~~~~v~l~~~~p~~~~~~~~~~~~~vl~~il~~~~~srL~~~lr~~~g~~~~~~~~~~~~~~~~~~~~i~~~ 355 (1008)
....+. .++.+.++|+.|.. .+++++++.+++.+||++++|||++.+|+ .|++|+++++...+ .+.|.|.+++.
T Consensus 227 -~~~~~~~~q~~~~~~~~~~~~--~~~d~~~l~vl~~iLgg~~~srL~~~lre-~gl~y~~~s~~~~~-~~~g~~~i~~~ 301 (406)
T 3eoq_A 227 -ERPYEKARALYLVALFPGVAY--QEEARFPGQVLAHLLGEEGSGRLHFALVD-KGLAEVASFGLEEA-DRAGTFHAYVQ 301 (406)
T ss_dssp -EEECTTCSSEEEEEEEECCCT--TCTTHHHHHHHHHHHHCTTTSHHHHHTTT-TTSEEEEEEEEEEC-SSCEEEEEEEE
T ss_pred -EEECCCCCCEEEEEEECCCCC--CCCHHHHHHHHHHHHCCCCCHHHHHHHHH-CCCEEEEEEEECCC-CCCEEEEEEEE
T ss_conf -983687350589999447998--88119999999999679962488999997-59746999874056-78637999998
Q ss_pred ECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHH
Q ss_conf 44883799999999999999967999999999999999999999983103782889999999753699756978999999
Q 001831 356 CKERGTLKALESMLIEVARVRLHGFSEREVSVARALLMSEVESAYLERDQMQSTNLRDECLQHFLCKEPIIGIEYEARLQ 435 (1008)
Q Consensus 356 ~~~~~~~~~~~~i~~~l~~l~~~g~s~~el~~ak~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (1008)
+.+++.+++++.+.+++++++++|++++||+++|+.++.++...+++. ..++..+...+..+........ .
T Consensus 302 ~~~~~~~~~~~~i~~~l~~l~~~~~t~~el~~ak~~l~~~~~~~~e~~-----~~~~~~~~~~~~~~~~~~~~~~----~ 372 (406)
T 3eoq_A 302 ADPARKGEVLAVLQEELDRLGREGVGEEEVERAKTPLATGLVFAGETP-----MQRLFHLGMEYLYTGRYLSLEE----V 372 (406)
T ss_dssp ECGGGHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHTTSH-----HHHHHHHHHHHHHHSSCCCHHH----H
T ss_pred ECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCH-----HHHHHHHHHHHHHCCCCCCHHH----H
T ss_conf 473329999999999999998579999999999999997787734789-----9999999999996699899999----9
Q ss_pred HHHCCCCCHHHHHHHHHHHCCCCCEEEEEECCCC
Q ss_conf 7882899999999999986025980899818999
Q 001831 436 KTLLPHISALEVSRYSEKLQTSCSCVIKTIEPQT 469 (1008)
Q Consensus 436 ~~~i~~it~edv~~~~~~~l~~~~~~~~~~~p~~ 469 (1008)
.+.|+++|++||++++++|+.+++. ++++||..
T Consensus 373 ~~~i~~vt~~dv~~~a~~~l~~~~~-~~vvGp~~ 405 (406)
T 3eoq_A 373 KARVQRVTSREVNALLERGFLEKGL-YYLVLPHG 405 (406)
T ss_dssp HHHHHHCCHHHHHHHHHTTTTTSCE-EEEEECCC
T ss_pred HHHHHHCCHHHHHHHHHHHCCCCCE-EEEECCCC
T ss_conf 9999828999999999986585667-99978989
No 6
>3ami_A Zinc peptidase; alpha/beta, zinc binding, hydrolase; 2.40A {Sphingomonas} PDB: 3amj_C
Probab=1.00 E-value=1 Score=464.06 Aligned_cols=413 Identities=19% Similarity=0.226 Sum_probs=352.7
Q ss_pred CCEEEECCCCCEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCC
Q ss_conf 84899818996899962699885599999981358787899978259999871479889991369999998045259985
Q 001831 37 GVDYGRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDIIKFLESIGAEFGACQ 116 (1008)
Q Consensus 37 ~i~~~~L~NGl~v~~~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ahllehl~f~gs~~~~~~~~~~~l~~~g~~~g~~~ 116 (1008)
+++.++|+||++|++.+++..+ .+.+++++++|+++|++++.|+||++|||+|+||++||..++.+.++.+|+. +
T Consensus 6 ~~~~~~L~NGl~v~~~~~~~~~-~v~~~~~~~~Gs~~e~~~~~Glah~lehmlf~Gt~~~~~~~l~~~l~~~g~~----~ 80 (445)
T 3ami_A 6 STFETTLPNGLKVVVREDHRAP-TLVHMVWYRVGSMDETTGTTGVAHALEHMMFKGTKDVGPGEFSKRVAAMGGR----D 80 (445)
T ss_dssp GEEEEECTTSCEEEEEECTTSS-EEEEEEEESCCGGGCCTTCTTHHHHHHHHTTSCBSSSCTTHHHHHHHHTTCE----E
T ss_pred CCEEEECCCCCEEEEEECCCCC-EEEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC----C
T ss_conf 7179997999989999779998-6999999845567889889538999987010899889877899999982986----3
Q ss_pred CCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH-CCCCC-HHHHHHHHHHHHHCCCC
Q ss_conf 32356781799988789997889999999998204998792789999978999986-07992-12248999998805999
Q 001831 117 NAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEKERGAVLEEYR-GNRNA-SGRMQDAHWVLMMEGSK 194 (1008)
Q Consensus 117 na~t~~d~t~y~~~~~~~~~~~l~~~l~~l~~~~~~p~~~~~~~~~er~~i~~e~~-~~~~~-~~~~~~~~~~~~~~~~p 194 (1008)
||+|+.|+|+|+++++++ +++.+|+++++++.+|.|+++++++||+++.+|++ ...++ ..++.+.+.+.+|++||
T Consensus 81 na~t~~d~t~y~~~~~~~---~l~~~l~ll~d~~~~p~f~~~~~~~e~~~v~~e~~~~~~~~p~~~~~~~~~~~~~~~~p 157 (445)
T 3ami_A 81 NAFTTRDYTAYYQQVPSS---RLSDVMGLEADRMANLVVDDELFKKEIQVIAEERRWRTDDKPRSKAYEALMAASYVAHP 157 (445)
T ss_dssp EEEECSSCEEEEEEEEGG---GHHHHHHHHHHHHHCBCCCHHHHHHHHHHHHHHHHHTGGGCHHHHHHHHHHHHHCSSSG
T ss_pred CCCCCCCEEEEEEECCHH---HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC
T ss_conf 301479857999978889---99999999999961899998999999999999998544588479999999998605898
Q ss_pred CCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 88668988877744899999999988126689718999936999789999999763479999999998999999999993
Q 001831 195 YAECLPIGLEKVIRTVSSDTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPPVIPKFPVPSHQEPR 274 (1008)
Q Consensus 195 ~~~~~~~g~~~~i~~it~~~l~~f~~~~y~p~n~~l~i~Gdi~d~~~~~~~i~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 274 (1008)
|+ ++++|+.++|++++.++|++||++||+|+||+|+|+||+ |+++++++++++|+.||....+.... ...+.....+
T Consensus 158 ~~-~~~~G~~e~l~~it~~~l~~f~~~~y~p~n~~l~vvGd~-d~~~~~~~v~~~f~~~~~~~~~~~~~-~~~~~~~~~~ 234 (445)
T 3ami_A 158 YR-VPVIGWMNDIQNMTAQDVRDWYKRWYGPNNATVVVVGDV-EHEAVFRLAEQTYGKLARVEAPARKQ-QGEPQQAGVR 234 (445)
T ss_dssp GG-SCTTCCHHHHHHCCHHHHHHHHHHHCSGGGEEEEEEESC-CHHHHHHHHHHTGGGSCCCCCCCCCC-CCCCCCCSCE
T ss_pred CC-CCCCCCHHHHHHCCHHHHHHHHHHHCCCCCEEEEEECCC-CHHHHHHHHHHHHCCCCCCCCCCCCC-CCCCCCCCCE
T ss_conf 77-998889999865799999999997188556699998289-99999999999843798888998777-8898877865
Q ss_pred EEEEECCCCCCEEEEEEEECCCCC-CC-CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC-CCEEE
Q ss_conf 588743888730999999838876-78-9999999999999999999999998613799912421025744455-52899
Q 001831 275 FSCFIESEAGGSAVIVSYKMPVNE-LK-TIKDYKEMLTESMFLHALNQRFFKLSRRKDPPYFSCSASADDLVRP-LKAYI 351 (1008)
Q Consensus 275 ~~~~~~~~~~~~~v~l~~~~p~~~-~~-~~~~~~~~vl~~il~~~~~srL~~~lr~~~g~~~~~~~~~~~~~~~-~~~~~ 351 (1008)
.. ....+..++.+.++|+.|... .+ +++.+++.+++.+|+++.+|||++.+|++.|++|+++++......+ .|.|.
T Consensus 235 ~~-~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~vl~~iLg~~~~srL~~~lre~~gl~y~v~~~~~~~~~~~~g~~~ 313 (445)
T 3ami_A 235 RV-TVKAPAELPYLALAWHVPAIVDLDKSRDAYALEILAAVLDGYDGARMTRQLVRGNKHAVSAGAGYDSLSRGQQGLFI 313 (445)
T ss_dssp EE-EEEEECSSCEEEEEEEECCCSSTTCCHHHHHHHHHHHHHHSSTTCHHHHHTTTTSCCEEEEEEECCCCCSSCCEEEE
T ss_pred EE-EEECCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEE
T ss_conf 89-98568776379999976872125688329999999999807723578999852588579998501233457897599
Q ss_pred EEEEECCCC-HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHH
Q ss_conf 999944883-7999999999999999679999999999999999999999831037828899999997536997569789
Q 001831 352 MSSSCKERG-TLKALESMLIEVARVRLHGFSEREVSVARALLMSEVESAYLERDQMQSTNLRDECLQHFLCKEPIIGIEY 430 (1008)
Q Consensus 352 i~~~~~~~~-~~~~~~~i~~~l~~l~~~g~s~~el~~ak~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (1008)
+++.+.++. .+++++.+.++|++++++|++++||+++|+.++.++....+++ ..++..+...+..+.+...
T Consensus 314 i~~~~~~~~~~~~~~~~i~~~l~~l~~~g~t~~el~~ak~~~~~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~~--- 385 (445)
T 3ami_A 314 LEGVPSKGVTIAQLETDLRAQVRDIAAKGVTEAELSRVKSQMVAGKVYEQDSL-----MGQATQIGGLEVLGLSWRD--- 385 (445)
T ss_dssp EEEEECTTCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHTTTSH-----HHHHHHHHHHHTTTCCTTH---
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCH-----HHHHHHHHHHHHCCCCHHH---
T ss_conf 99997999999999999999999998539899999999999999999974478-----9999999999981798678---
Q ss_pred HHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCC
Q ss_conf 9999978828999999999999860259808998189998
Q 001831 431 EARLQKTLLPHISALEVSRYSEKLQTSCSCVIKTIEPQTF 470 (1008)
Q Consensus 431 ~~~~~~~~i~~it~edv~~~~~~~l~~~~~~~~~~~p~~~ 470 (1008)
...+.+.|+++|++||++++++|+.+++.++++++|...
T Consensus 386 -~~~~~~~i~~vt~~dv~~~a~~~l~~~~~~~~~~~p~~~ 424 (445)
T 3ami_A 386 -DDRFYQQLRSVTAAEVKAAAARLLTDDTLTVANLVPLPP 424 (445)
T ss_dssp -HHHHHHHHHTCCHHHHHHHHHTTSCSTTEEEEEEEEECC
T ss_pred -HHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEECCCCC
T ss_conf -999999997499999999999971857739999756765
No 7
>3hdi_A Processing protease; CAGE structure, M16B peptidase, metallopeptidase, peptidasome, protease, hydrolase; 2.70A {Bacillus halodurans c-125}
Probab=1.00 E-value=1 Score=455.58 Aligned_cols=403 Identities=19% Similarity=0.232 Sum_probs=346.3
Q ss_pred CEEEECCCCCEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
Q ss_conf 48998189968999626998855999999813587878999782599998714798899913699999980452599853
Q 001831 38 VDYGRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDIIKFLESIGAEFGACQN 117 (1008)
Q Consensus 38 i~~~~L~NGl~v~~~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ahllehl~f~gs~~~~~~~~~~~l~~~g~~~g~~~n 117 (1008)
++..+|+||++|++.+++..+ .++++++|++|+++|++++.|+||++|||+|+||++++..++.+.++.+|+. +|
T Consensus 2 ~~~~~L~NGl~v~~~~~~~~~-~~~~~l~~~~Gs~~e~~~~~G~ah~leh~lf~gt~~~~~~~~~~~l~~~G~~----~n 76 (421)
T 3hdi_A 2 INTMTLDNGVRIITEKMSTVR-SVSIGIWVGTGSRYESAEENGISHFLEHMFFKGTNTRSAQEIAEFFDSIGGQ----VN 76 (421)
T ss_dssp CEEEECTTSCEEEEEECTTCS-EEEEEEEESCCGGGCCGGGTTHHHHHHHHTTSBBSSSBHHHHHHHHHTTTSC----EE
T ss_pred CEEEECCCCCEEEEEECCCCC-EEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC----EE
T ss_conf 667986999889999879997-7999999823457889998867999999862798999999999999984881----20
Q ss_pred CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCC-CHHHHHHHHHHHHHCCCCCC
Q ss_conf 23567817999887899978899999999982049987927899999789999860799-21224899999880599988
Q 001831 118 AVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEKERGAVLEEYRGNRN-ASGRMQDAHWVLMMEGSKYA 196 (1008)
Q Consensus 118 a~t~~d~t~y~~~~~~~~~~~l~~~l~~l~~~~~~p~~~~~~~~~er~~i~~e~~~~~~-~~~~~~~~~~~~~~~~~p~~ 196 (1008)
|+|+.|+|+|+++++++ +++.+|++++|++.+|.|+++++++||+++.+|++...+ +..++.+.+.+.+|++|||+
T Consensus 77 a~t~~d~t~~~~~~~~~---~l~~~l~ll~d~~~~p~f~~~~~~~ek~~v~~e~~~~~~~p~~~~~~~~~~~~~~~~p~~ 153 (421)
T 3hdi_A 77 AFTSKEYTCYYAKVLDD---HAGQAIDTLSDMFFHSTFQKEELEKERKVVFEEIKMVDDTPDDIVHDLLSSATYGKHSLG 153 (421)
T ss_dssp EEECSSCEEEEEEEEGG---GHHHHHHHHHHHHHSBCCCHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTSGGG
T ss_pred EEECCCEEEEEEEECHH---HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCC
T ss_conf 24356569999996487---799999999999868999989999999999999987568888999999999824899999
Q ss_pred CCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 66898887774489999999998812668971899993699978999999976347999999999899999999999358
Q 001831 197 ECLPIGLEKVIRTVSSDTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPPVIPKFPVPSHQEPRFS 276 (1008)
Q Consensus 197 ~~~~~g~~~~i~~it~~~l~~f~~~~y~p~n~~l~i~Gdi~d~~~~~~~i~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (1008)
++.+|+.++|++++.++|++||++||+|+||+|+|+||+ + +++.++++++|+.|+....+.. ...|.. ....
T Consensus 154 -~~~~G~~~~l~~it~~~l~~f~~~~y~p~n~~l~v~Gd~-~-~~~~~~v~~~f~~~~~~~~~~~---~~~~~~-~~~~- 225 (421)
T 3hdi_A 154 -YPILGTVETLNSFNEGMLRHYMDRFYTGDYVVISVAGNV-H-DELIDKIKETFSQVKPTTYNYQ---GEKPMF-LPNR- 225 (421)
T ss_dssp -SCTTCCHHHHHHCCHHHHHHHHHHHSSTTTEEEEEEESC-C-HHHHHHHHHHTTSSCCCCCCCC---CCCCCC-CCCE-
T ss_pred -CCCCCCHHHHHHCCHHHHHHHHHHHCCCCCEEEEEEECC-C-HHHHHHHHHHHCCCCCCCCCCC---CCCCCC-CCCE-
T ss_conf -988689899975999999999998448466799998088-7-9999999998368888888878---898877-8853-
Q ss_pred EEECCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEEEE
Q ss_conf 87438887309999998388767899999999999999999999999986137999124210257444555289999994
Q 001831 277 CFIESEAGGSAVIVSYKMPVNELKTIKDYKEMLTESMFLHALNQRFFKLSRRKDPPYFSCSASADDLVRPLKAYIMSSSC 356 (1008)
Q Consensus 277 ~~~~~~~~~~~v~l~~~~p~~~~~~~~~~~~~vl~~il~~~~~srL~~~lr~~~g~~~~~~~~~~~~~~~~~~~~i~~~~ 356 (1008)
.....+..++.+.++|+.+.. ++++.+++.+++.+||++++|||++.+|++.|++|+++++...+ .+.|.|.+++.+
T Consensus 226 ~~~~~~~~q~~v~~~~~~~~~--~~~d~~~l~vl~~iLgg~~~srL~~~lRe~~glay~~~s~~~~~-~~~g~~~i~~~~ 302 (421)
T 3hdi_A 226 IVRKKETEQAHLCLGYPGLPI--GDKDVYALVLLNNVLGGSMSSRLFQDIREKRGLCYSVFSYHSSF-RDSGMLTIYAGT 302 (421)
T ss_dssp EEEECCCSEEEEEEEEECCCT--TCTTHHHHHHHHHHHTSSSSSHHHHHHTTTTCCCSCEEEEEEEC-SSCEEEEEEEEE
T ss_pred EEECCCCCCEEEEEEEECCCC--CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEEEECCC-CCCCEEEEEEEE
T ss_conf 886078884589999766998--98169999999999679963279999987359779999751466-788369999980
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHH
Q ss_conf 48837999999999999999679999999999999999999999831037828899999997536997569789999997
Q 001831 357 KERGTLKALESMLIEVARVRLHGFSEREVSVARALLMSEVESAYLERDQMQSTNLRDECLQHFLCKEPIIGIEYEARLQK 436 (1008)
Q Consensus 357 ~~~~~~~~~~~i~~~l~~l~~~g~s~~el~~ak~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (1008)
++++.+++++.+.+++++++++|++++||+++|+.++.++....++. ..++..+......+....... .+.
T Consensus 303 ~~~~~~~~~~~i~~~l~~l~~~~~t~~el~~ak~~l~~~~~~~~e~~-----~~~~~~~~~~~~~~~~~~~~~----~~~ 373 (421)
T 3hdi_A 303 GHDQLDDLVYSIQETTSALAEKGLTEKELENGKEQLKGSLMLSLEST-----NSRMSRNGKNELLLKKHRSLD----EMI 373 (421)
T ss_dssp EGGGHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHTTCH-----HHHHHHHHHHHHHTSCCCCHH----HHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCH-----HHHHHHHHHHHHHCCCCCCHH----HHH
T ss_conf 88789999999999999998579999999999999999998706899-----999999999999669989999----999
Q ss_pred HHCCCCCHHHHHHHHHHHCCCCCEEEEEECCCC
Q ss_conf 882899999999999986025980899818999
Q 001831 437 TLLPHISALEVSRYSEKLQTSCSCVIKTIEPQT 469 (1008)
Q Consensus 437 ~~i~~it~edv~~~~~~~l~~~~~~~~~~~p~~ 469 (1008)
+.|+++|++||++++++|+ +++..+++++|..
T Consensus 374 ~~i~~vt~~dv~~~a~~~~-~~~~~~~vvgp~~ 405 (421)
T 3hdi_A 374 EQINAVQKQDVSRLAKILL-SASPSISLINANG 405 (421)
T ss_dssp HHHHHCCHHHHHHHHHHHT-TSCCEEEEEESSC
T ss_pred HHHHCCCHHHHHHHHHHHC-CCCCEEEEECCHH
T ss_conf 9997089999999999970-5275899987500
No 8
>1pp9_A Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_A* 1be3_A* 1l0n_A* 1ntk_A* 1ntm_A* 1ntz_A* 1nu1_A* 1l0l_A* 1ppj_A* 1sqq_A* 1sqv_A* 1sqx_A* 2a06_A* 2fyu_A* 2ybb_A* 1sqb_A* 1sqp_A* 1qcr_A* 1bcc_A* 2bcc_A* ...
Probab=1.00 E-value=1 Score=443.70 Aligned_cols=419 Identities=18% Similarity=0.224 Sum_probs=348.7
Q ss_pred CCCCCCCCCCEEEECCCCCEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHC
Q ss_conf 54699999848998189968999626998855999999813587878999782599998714798899913699999980
Q 001831 29 EELGEQPFGVDYGRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDIIKFLESI 108 (1008)
Q Consensus 29 ~~~~~~~~~i~~~~L~NGl~v~~~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ahllehl~f~gs~~~~~~~~~~~l~~~ 108 (1008)
.+++.+|. ++.++|+||++|++.+++.+ .+.+.++|++|+++|++++.|+||++|||+|+||++++..++.+.++.+
T Consensus 6 ~~~~~~~~-~~~~~L~NGl~v~~~~~~~~--~~~~~l~~~~Gs~~e~~~~~Glahllehmlf~GT~~~~~~~~~~~l~~~ 82 (446)
T 1pp9_A 6 QALQSVPE-TQVSQLDNGLRVASEQSSQP--TCTVGVWIDAGSRYESEKNNGAGYFVEHLAFKGTKNRPGNALEKEVESM 82 (446)
T ss_dssp HHHTTSCC-CEEEECTTCCEEEEEECSCS--EEEEEEEESCSGGGCCTTTTTHHHHHHHHTTSCBSSSTTTHHHHHHHHT
T ss_pred CCCCCCCC-CEEEECCCCCEEEEEECCCC--EEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHC
T ss_conf 12115667-45999999988999967998--7999999753048899998738999999751789999989999999970
Q ss_pred CCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCC-HHHHHHHHHH
Q ss_conf 452599853235678179998878999788999999999820499879278999997899998607992-1224899999
Q 001831 109 GAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEKERGAVLEEYRGNRNA-SGRMQDAHWV 187 (1008)
Q Consensus 109 g~~~g~~~na~t~~d~t~y~~~~~~~~~~~l~~~l~~l~~~~~~p~~~~~~~~~er~~i~~e~~~~~~~-~~~~~~~~~~ 187 (1008)
|+ .+||+|+.|+|+|+++++++ +++.+|++++|++.+|.|+++++++||+++.+|++...++ ..++.+.+.+
T Consensus 83 G~----~~na~t~~d~t~~~~~~~~~---~l~~~l~ll~d~~~~p~f~~~~~~~ek~~v~~e~~~~~~~~~~~~~~~~~~ 155 (446)
T 1pp9_A 83 GA----HLNAYSTREHTAYYIKALSK---DLPKAVELLADIVQNCSLEDSQIEKERDVILQELQENDTSMRDVVFNYLHA 155 (446)
T ss_dssp TC----EEEEEECSSCEEEEEEEEGG---GHHHHHHHHHHHHHHBCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CC----EEEEEECCCEEEEEEEECHH---HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf 99----79999768769999992578---899999999999857999989999999999999986342888999999999
Q ss_pred HHHCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 88059998866898887774489999999998812668971899993699978999999976347999999999899999
Q 001831 188 LMMEGSKYAECLPIGLEKVIRTVSSDTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPPVIPKFPV 267 (1008)
Q Consensus 188 ~~~~~~p~~~~~~~g~~~~i~~it~~~l~~f~~~~y~p~n~~l~i~Gdi~d~~~~~~~i~~~f~~~~~~~~~~~~~~~~~ 267 (1008)
.+|++|||+ ++++|+.++|++++.++|++||++||+|+||+|+++||+ ++++++++++++|+.|+....+...+....
T Consensus 156 ~~~~~~~~~-~~~~G~~~~l~~~~~~~l~~f~~~~y~p~n~~l~v~Gd~-~~~~~~~~i~~~f~~~~~~~~~~~~~~~~~ 233 (446)
T 1pp9_A 156 TAFQGTPLA-QSVEGPSENVRKLSRADLTEYLSRHYKAPRMVLAAAGGL-EHRQLLDLAQKHFSGLSGTYDEDAVPTLSP 233 (446)
T ss_dssp HHTTTSGGG-SCSSCCHHHHHHCCHHHHHHHHHHHCCGGGEEEEEEESC-CHHHHHHHHHHHHTTSCSCCCSSCCCCCCC
T ss_pred HHCCCCCCC-CCCCCCHHHHHHCCHHHHHHHHHHCCCCCCEEEEEECCC-CHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 862899999-998588899974799999999994467887799998089-999999999998236888888776666778
Q ss_pred CCCCCCCEEEEECCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHH---------HHHHHHHHHHCCCCCCEEEEEE
Q ss_conf 9999993588743888730999999838876789999999999999999---------9999999986137999124210
Q 001831 268 PSHQEPRFSCFIESEAGGSAVIVSYKMPVNELKTIKDYKEMLTESMFLH---------ALNQRFFKLSRRKDPPYFSCSA 338 (1008)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~v~l~~~~p~~~~~~~~~~~~~vl~~il~~---------~~~srL~~~lr~~~g~~~~~~~ 338 (1008)
+.. ......+.+++.+++.+.++|+.|.. .+++++++.+++.+||+ +++|||++.+|+ .|++|++++
T Consensus 234 ~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~d~~al~vl~~iLg~~~~~~~~g~~~~srL~~~lr~-~glay~~~s 309 (446)
T 1pp9_A 234 CRF-TGSQICHREDGLPLAHVAIAVEGPGW--AHPDNVALQVANAIIGHYDCTYGGGAHLSSPLASIAAT-NKLCQSFQT 309 (446)
T ss_dssp CCC-CCEEEEEEETTSSSEEEEEEEEECCT--TCTHHHHHHHHHHHHCEEETTCSCGGGCSSHHHHHHHH-HTCCSEEEE
T ss_pred CCC-CCCEEEEECCCCCCEEEEEEEECCCC--CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH-CCCEEEEEE
T ss_conf 887-89658970588540589999734899--99509999999998199864578889877799999986-498389988
Q ss_pred CCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
Q ss_conf 25744455528999999448837999999999999999679999999999999999999999831037828899999997
Q 001831 339 SADDLVRPLKAYIMSSSCKERGTLKALESMLIEVARVRLHGFSEREVSVARALLMSEVESAYLERDQMQSTNLRDECLQH 418 (1008)
Q Consensus 339 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~l~~l~~~g~s~~el~~ak~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (1008)
+...+ .+.|.|.+++.+++++.+++++.+.++++++++ |++++||+++|+.++..+....+++ ..++..+...
T Consensus 310 ~~~~~-~~~g~~~i~~~~~~~~~~~~~~~i~~~l~~l~~-~~t~~el~~ak~~~~~~~~~~~~~~-----~~~~~~~~~~ 382 (446)
T 1pp9_A 310 FNICY-ADTGLLGAHFVCDHMSIDDMMFVLQGQWMRLCT-SATESEVLRGKNLLRNALVSHLDGT-----TPVCEDIGRS 382 (446)
T ss_dssp EEEEC-SSCEEEEEEEEECTTSHHHHHHHHHHHHHHHHH-HCCHHHHHHHHHHHHHHHHHHSCSH-----HHHHHHHHHH
T ss_pred ECCCC-CCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHCCCH-----HHHHHHHHHH
T ss_conf 50567-787699999997787799999999999999864-6999999999999999998805889-----9999999999
Q ss_pred H-HCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCC-CCHHH
Q ss_conf 5-369975697899999978828999999999999860259808998189998-99999
Q 001831 419 F-LCKEPIIGIEYEARLQKTLLPHISALEVSRYSEKLQTSCSCVIKTIEPQTF-STIDD 475 (1008)
Q Consensus 419 ~-~~~~~~~~~~~~~~~~~~~i~~it~edv~~~~~~~l~~~~~~~~~~~p~~~-~~~~~ 475 (1008)
+ .+|.+.. ... +.+.|.++|++||++++++|+.+++.+++++||... +.-.+
T Consensus 383 ~~~~g~~~~-~~~----~~~~i~~vt~edv~~~a~~~~~~~~~~~~~~g~~~~~~~~~~ 436 (446)
T 1pp9_A 383 LLTYGRRIP-LAE----WESRIAEVDARVVREVCSKYFYDQCPAVAGFGPIEQLPDYNR 436 (446)
T ss_dssp HHHTSSCCC-HHH----HHHHHHTCCHHHHHHHHHHHTTTCCCEEEEEESCTTSCCHHH
T ss_pred HHHCCCCCC-HHH----HHHHHHCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHH
T ss_conf 997389899-999----999997399999999999973888867999887444757889
No 9
>3go9_A Insulinase family protease; IDP00573, structural genomics, for structural genomics of infectious diseases, csgid, HYDR; HET: MSE; 1.62A {Yersinia pestis}
Probab=1.00 E-value=1 Score=442.09 Aligned_cols=441 Identities=17% Similarity=0.256 Sum_probs=345.0
Q ss_pred CCCCCCCCCCCCEEEECCCCCEEEEEECC-CCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf 75546999998489981899689996269-98855999999813587878999782599998714798899913699999
Q 001831 27 LNEELGEQPFGVDYGRLDNGLFYYVRCNS-KPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDIIKFL 105 (1008)
Q Consensus 27 ~~~~~~~~~~~i~~~~L~NGl~v~~~~~~-~~~~~~~~~l~~~~Gs~~e~~~~~G~ahllehl~f~gs~~~~~~~~~~~l 105 (1008)
....++.+|. +++++|+||++|++++++ .+...++++++|++||++|++++.|+|||+|||+|+||++++..++.+.+
T Consensus 16 ~~~~l~~dp~-~~~~~L~NGl~v~~~~~~~~~~~~v~~~l~~~~Gs~~e~~~~~Glahllehmlf~GT~~~~~~~~~~~~ 94 (492)
T 3go9_A 16 QAEALQPDPA-WQQGKLDNGFSWQLLATPQRPSDRIELRLIVNTGSLSENTQEVGFAHLLPRLALMSSASFTPAQLQSLW 94 (492)
T ss_dssp CCCCCCBCTT-EEEEECTTSCEEEEEECTTSTTSCEEEEEEESCCGGGCCGGGTTHHHHHHHHHHHCCTTCCHHHHHHHH
T ss_pred CCCCCCCCCC-EEEEECCCCCEEEEEECCCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHH
T ss_conf 6677899987-279999999989999788888886999999922557889997679999999983288899978999999
Q ss_pred HHCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
Q ss_conf 98045259985323567817999887899978899999999982049987927899999789999860799212248999
Q 001831 106 ESIGAEFGACQNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEKERGAVLEEYRGNRNASGRMQDAH 185 (1008)
Q Consensus 106 ~~~g~~~g~~~na~t~~d~t~y~~~~~~~~~~~l~~~l~~l~~~~~~p~~~~~~~~~er~~i~~e~~~~~~~~~~~~~~~ 185 (1008)
+.....+|+.+||+|++|+|+|+++++++..++++.+|++|+|++.+|.|+++++++||.++.++++...+++... .+
T Consensus 95 ~~~~~~~G~~~na~t~~d~t~y~~~~~~~~~~~l~~~l~ll~d~~~~p~f~~~~~~~er~~~~~~~~~~~~~~~~~--~~ 172 (492)
T 3go9_A 95 QQGIDNERPLPPAITSYDFTLYSLSLPNNRPDLLKDALAWLSDTAGNLAVSEQTVNAALNTATDPIATFPQNIQEP--WW 172 (492)
T ss_dssp HTCSCSSSCCCSEEECSSCEEEEEEECTTCHHHHHHHHHHHHHHHHCCCCSHHHHHHHHTCSSCCEEESSSCTTCH--HH
T ss_pred HHHHHHCCCCCCEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHH--HH
T ss_conf 9977731897652767881799997787738899999999999980798899999999978888998521360137--99
Q ss_pred HHHHHCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCC-CCCC
Q ss_conf 998805999886689888777448999999999881266897189999369997899999997634799999999-9899
Q 001831 186 WVLMMEGSKYAECLPIGLEKVIRTVSSDTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPP-VIPK 264 (1008)
Q Consensus 186 ~~~~~~~~p~~~~~~~g~~~~i~~it~~~l~~f~~~~y~p~n~~l~i~Gdi~d~~~~~~~i~~~f~~~~~~~~~~-~~~~ 264 (1008)
...+++.++++ ++..+ ++|++++.++|++||++||+|+||+|+|+||+ |+++++++++++|+.|+....++ ..+.
T Consensus 173 ~~~~~~~~~~~-~~~~~--~~i~~it~~dL~~fy~~~Y~p~n~~l~vvGdv-d~~~~~~~i~~~f~~~~~~~~~~~~~~~ 248 (492)
T 3go9_A 173 RYRLKGSSLIG-HDPGQ--PVTQPVDVEKLKQFYQQWYTPDAMTLYVVGNV-DSRSIAAQISKAFSELKGKRTAPAAVAT 248 (492)
T ss_dssp HHHTTTSTTTT-CCTTC--CCCSSCCHHHHHHHHHHHCCGGGEEEEEEESC-CHHHHHHHHHHHHTTCCCCCSSCCCCCC
T ss_pred HHHHCCCCCCC-CCCCH--HHHHCCCHHHHHHHHHHHCCCCCEEEEEECCC-CHHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 98744687456-99851--23514999999999998568576489998189-9999999999985169888889988887
Q ss_pred CCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCCCH----HHHHHHHHHHHHHHHHHHHHHHHHCC--CCCCEEEEEE
Q ss_conf 99999999935887438887309999998388767899----99999999999999999999998613--7999124210
Q 001831 265 FPVPSHQEPRFSCFIESEAGGSAVIVSYKMPVNELKTI----KDYKEMLTESMFLHALNQRFFKLSRR--KDPPYFSCSA 338 (1008)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~p~~~~~~~----~~~~~~vl~~il~~~~~srL~~~lr~--~~g~~~~~~~ 338 (1008)
. .+. ..... ...+.+..++.+.++|+.|.....+. +++...+++.+|+ ++|+..+|+ +.|++|++++
T Consensus 249 ~-~~~-~~~~~-~~~~~~~~q~~v~l~~~~~~~~~~d~~~l~~~~~~~v~~~iLg----~~L~~~lre~~~~gl~y~~~s 321 (492)
T 3go9_A 249 L-APL-PPEPV-SLMNEQAAQDTLSLMWDTPWHPIQDSMALSRYWRSDLAREALF----WHIKQVLEKNNQKNLKLGFDC 321 (492)
T ss_dssp C-CCC-CSSCE-EEEESSCSSEEEEEEEEEECCCCCSHHHHHHHHHHHHHHHHHH----HHHHHHHHHSCCTTCEEEEEE
T ss_pred C-CCC-CCCCE-EEECCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHCCCCCCCCCC
T ss_conf 8-888-87755-8973787774799996278877654789999999999999999----999999997425454434684
Q ss_pred CCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
Q ss_conf 25744455528999999448837999999999999999679999999999999999999999831037828899999997
Q 001831 339 SADDLVRPLKAYIMSSSCKERGTLKALESMLIEVARVRLHGFSEREVSVARALLMSEVESAYLERDQMQSTNLRDECLQH 418 (1008)
Q Consensus 339 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~l~~l~~~g~s~~el~~ak~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (1008)
+.... ++.+.|.+ .+.+++.+++++.+.++|++++++|++++||+++|+.++..+...++.........+++.+...
T Consensus 322 ~~~~~-~~~~~~~i--~~~~~~~~~a~~~i~~el~~l~~~g~te~EL~~aK~~~~~~l~~~~~~~~~~~~~~~a~~~~~~ 398 (492)
T 3go9_A 322 RVQYQ-RAQCAIHL--NTPVENLTANMTFVARELAALRANGLSQAEFDALMTQKNDQLSKLFATYARTDTDILMSQRLRS 398 (492)
T ss_dssp EEETT-EEEEEEEE--EECGGGHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHTHHHHHHTCCHHHHHHHHHHH
T ss_pred HHHHH-HCCEEEEE--ECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf 06644-20238999--7683009999999999999999739899999999999999999999988711669999999999
Q ss_pred HHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCC-CHHHHHHHHHHHHHHH
Q ss_conf 53699756978999999788289999999999998602598089981899989-9999999999997321
Q 001831 419 FLCKEPIIGIEYEARLQKTLLPHISALEVSRYSEKLQTSCSCVIKTIEPQTFS-TIDDLKNIVLKIKNLE 487 (1008)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~i~~it~edv~~~~~~~l~~~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~~ 487 (1008)
+..+.....+.+..+.+.+.|+++|.+||++++++++.++..++++.++.... ..+. +++.|.+..
T Consensus 399 ~~~~~~~~~~~~~~~~~~~~i~~vT~edV~~~a~~~l~~~~~~vvvg~~~~~e~~~~~---l~~~~~~~~ 465 (492)
T 3go9_A 399 QQSGVVDIAPEQYQKLRQAFLSGLTLAELNRELKQQLSQDTTLVLMQPKGEPEVNVKA---LQEIYNGIM 465 (492)
T ss_dssp HHHTCCCBCHHHHHHHHHHHHHHCCHHHHHHHHHHHHTSCCEEEEEEETTSCCCCHHH---HHHHHHHHH
T ss_pred HHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHH---HHHHHHHHH
T ss_conf 8659876899999999999880699999999999984899719997288887754999---999999972
No 10
>1hr6_B Beta-MPP, mitochondrial processing peptidase beta subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_B 1hr8_B* 1hr9_B*
Probab=1.00 E-value=1 Score=437.47 Aligned_cols=419 Identities=17% Similarity=0.202 Sum_probs=351.4
Q ss_pred CCCEEEECCCCCEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCC
Q ss_conf 98489981899689996269988559999998135878789997825999987147988999136999999804525998
Q 001831 36 FGVDYGRLDNGLFYYVRCNSKPRMRAALALAVKAGSVLEEEHERGVAHIVEHLAFSATEKYTNHDIIKFLESIGAEFGAC 115 (1008)
Q Consensus 36 ~~i~~~~L~NGl~v~~~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~ahllehl~f~gs~~~~~~~~~~~l~~~g~~~g~~ 115 (1008)
.+++.++|+||++|++.+++.+. .+.+.+++++|+++|++++.|+||++|||+|+||++++..++.+.++.+|+.
T Consensus 5 ~~~~~~~L~NGl~v~~~~~~~~~-~~~~~~~~~~Gs~~e~~~~~G~ah~le~~~~~Gt~~~~~~~l~~~l~~~g~~---- 79 (443)
T 1hr6_B 5 PGTRTSKLPNGLTIATEYIPNTS-SATVGIFVDAGSRAENVKNNGTAHFLEHLAFKGTQNRPQQGIELEIENIGSH---- 79 (443)
T ss_dssp CCCEEEECTTSCEEEEEECSSCS-EEEEEEEEECSGGGCCTTTTTHHHHHHHHTTSBBSSCBHHHHHHHHHHTTCE----
T ss_pred CCCEEEECCCCCEEEEEECCCCC-EEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCE----
T ss_conf 87458998998889999779998-7999999851137899998768999998750588899989999999975996----
Q ss_pred CCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCC-HHHHHHHHHHHHHCCCC
Q ss_conf 53235678179998878999788999999999820499879278999997899998607992-12248999998805999
Q 001831 116 QNAVTSADETVYELFVPVDKPELLSRAISVLAEFSTEVRVSKDDLEKERGAVLEEYRGNRNA-SGRMQDAHWVLMMEGSK 194 (1008)
Q Consensus 116 ~na~t~~d~t~y~~~~~~~~~~~l~~~l~~l~~~~~~p~~~~~~~~~er~~i~~e~~~~~~~-~~~~~~~~~~~~~~~~p 194 (1008)
+|++|+.|+|+|.++++++ +++.+|+++.+++.+|.|+++++++||+++.+|++...++ ...+.+.+.+.+|++||
T Consensus 80 ~na~t~~~~t~~~~~~~~~---~l~~~l~ll~d~~~~p~f~~~~~~~e~~~v~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (443)
T 1hr6_B 80 LNAYTSRENTVYYAKSLQE---DIPKAVDILSDILTKSVLDNSAIERERDVIIRESEEVDKMYDEVVFDHLHEITYKDQP 156 (443)
T ss_dssp EEEEECSSEEEEEEEEEGG---GHHHHHHHHHHHHHSBCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTSG
T ss_pred EEEEECCCEEEEEEEECHH---HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCC
T ss_conf 7899878768999996477---7999999999998578999999999999999999841278488999999997347998
Q ss_pred CCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC--CCCCCCC
Q ss_conf 88668988877744899999999988126689718999936999789999999763479999999998999--9999999
Q 001831 195 YAECLPIGLEKVIRTVSSDTVKRFYQKWYRLQNMAVIAVGDFPDTKGVVELINTHFGQKKSATDPPVIPKF--PVPSHQE 272 (1008)
Q Consensus 195 ~~~~~~~g~~~~i~~it~~~l~~f~~~~y~p~n~~l~i~Gdi~d~~~~~~~i~~~f~~~~~~~~~~~~~~~--~~~~~~~ 272 (1008)
|+ ++++|+.++|++++.++|++||++||+|+||+|+++||+ ++++++++++++|+.|+....+...+.. ..+.. .
T Consensus 157 ~~-~~~~g~~~~i~~~~~~~l~~f~~~~y~~~n~~l~v~Gd~-~~~~~~~~i~~~f~~~~~~~~~~~~~~~~~~~~~~-~ 233 (443)
T 1hr6_B 157 LG-RTILGPIKNIKSITRTDLKDYITKNYKGDRMVLAGAGAV-DHEKLVQYAQKYFGHVPKSESPVPLGSPRGPLPVF-C 233 (443)
T ss_dssp GG-SCSSCCHHHHHHCCHHHHHHHHHHHCCGGGEEEEEEESC-CHHHHHHHHHHHHTTSCCCSSCCCTTSCCSSCCCC-C
T ss_pred CC-CCCCCCHHHHHHCCHHHHHHHHHHCCCCCCEEEEEECCC-CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC-C
T ss_conf 98-888389999964899999999994476777799998599-99999999999835799888887765455788887-7
Q ss_pred CCEEEEECCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHH---------HHHHHHHHHHCCCCCCEEEEEECCCCC
Q ss_conf 93588743888730999999838876789999999999999999---------999999998613799912421025744
Q 001831 273 PRFSCFIESEAGGSAVIVSYKMPVNELKTIKDYKEMLTESMFLH---------ALNQRFFKLSRRKDPPYFSCSASADDL 343 (1008)
Q Consensus 273 ~~~~~~~~~~~~~~~v~l~~~~p~~~~~~~~~~~~~vl~~il~~---------~~~srL~~~lr~~~g~~~~~~~~~~~~ 343 (1008)
........++..++.+.++|+.|. .++++.+++.+++.+||+ +++|||++.+|++.|++|+++++...+
T Consensus 234 ~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~l~vl~~iLg~~~r~~~~g~~~~s~L~~~lre~~glay~~~~~~~~~ 311 (443)
T 1hr6_B 234 RGERFIKENTLPTTHIAIALEGVS--WSAPDYFVALATQAIVGNWDRAIGTGTNSPSPLAVAASQNGSLANSYMSFSTSY 311 (443)
T ss_dssp CEEEEEECTTCSEEEEEEEEECCC--TTCTTHHHHHHHHHHHCEEETTTBCSSSSCCHHHHHHHSTTCSCSEEEEEEEEC
T ss_pred CCEEEECCCCCCCEEEEEEEECCC--CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEEECCC
T ss_conf 876874268855058999970599--999418999999998089865578888866689999998709748998652477
Q ss_pred CCCCCEEEEEEEEC--CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH-H
Q ss_conf 45552899999944--88379999999999999996799999999999999999999998310378288999999975-3
Q 001831 344 VRPLKAYIMSSSCK--ERGTLKALESMLIEVARVRLHGFSEREVSVARALLMSEVESAYLERDQMQSTNLRDECLQHF-L 420 (1008)
Q Consensus 344 ~~~~~~~~i~~~~~--~~~~~~~~~~i~~~l~~l~~~g~s~~el~~ak~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 420 (1008)
.+.|.|.+++.++ +++.+++++.+.+++++++.+|++++||+++|+.++.++....+++ ..++..+...+ .
T Consensus 312 -~~~g~~~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~t~~el~~ak~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 385 (443)
T 1hr6_B 312 -ADSGLWGMYIVTDSNEHNVRLIVNEILKEWKRIKSGKISDAEVNRAKAQLKAALLLSLDGS-----TAIVEDIGRQVVT 385 (443)
T ss_dssp -SSCEEEEEEEEEETTTCCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCCSH-----HHHHHHHHHHHHH
T ss_pred -CCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCH-----HHHHHHHHHHHHH
T ss_conf -7762799999826876679999999999999975389899999999999999999726899-----9999999999985
Q ss_pred CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCC-CCHHHHHH
Q ss_conf 69975697899999978828999999999999860259808998189998-99999999
Q 001831 421 CKEPIIGIEYEARLQKTLLPHISALEVSRYSEKLQTSCSCVIKTIEPQTF-STIDDLKN 478 (1008)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~i~~it~edv~~~~~~~l~~~~~~~~~~~p~~~-~~~~~~~~ 478 (1008)
+|.+.. .. .+.+.|+++|++||++++++|+.+++..+++++|... +..+++..
T Consensus 386 ~g~~~~-~~----~~~~~i~~vt~~dv~~~a~~~l~~~~~~~~v~g~~~~~~~~~~~~~ 439 (443)
T 1hr6_B 386 TGKRLS-PE----EVFEQVDKITKDDIIMWANYRLQNKPVSMVALGNTSTVPNVSYIEE 439 (443)
T ss_dssp HSSCCC-HH----HHHHHHHTCCHHHHHHHHHHHSSSCCEEEEEEECGGGCCCHHHHHH
T ss_pred CCCCCC-HH----HHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHH
T ss_conf 488689-99----9999997289999999999982668867999887333756999998
Done!