BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001833
(1008 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SFX2|PUB43_ARATH U-box domain-containing protein 43 OS=Arabidopsis thaliana GN=PUB43
PE=2 SV=1
Length = 811
Score = 248 bits (634), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 233/785 (29%), Positives = 393/785 (50%), Gaps = 44/785 (5%)
Query: 264 QSFYCPITRDVMVDPVETSSGQTFERSAIEKWFS----DGNNL-CPLTMTVLDTSILRPN 318
++F CP+T+ VM +PV +GQTFER AIEKWF +G L CP+T L + L P+
Sbjct: 27 EAFICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKELSITDLSPS 86
Query: 319 KTLRQSIEEWKDRNTMITIASMKPKLVSTEVE-EVLHCLEQLQDLCQQRDQHREWVILEN 377
LR +IEEW+ RN + + + L E +L L+ ++++C+ + R+ V
Sbjct: 87 IALRNTIEEWRARNDALKLDIARQSLYLGNAETNILLALKNVREICRNIRKIRQRVCNPQ 146
Query: 378 YIPKLIYLLGSKNRDVRNRALIILHILVKDSNDTKERLANGDDAVESIVRSLGRRIEE-R 436
+ + +L S + +VR +AL L ++V+ ++K +A G D V +IV+ L + + R
Sbjct: 147 LVRLITDMLKSSSHEVRCKALQTLQVVVEGDEESKAIVAEG-DTVRTIVKFLSQEPSKGR 205
Query: 437 KLAVALLLELSTCNTLRDQIGDVQGCILLLVTMASSDDNQAS--RDAQELLENLSFSDDN 494
+ AV++L ELS L ++IG + G I+LLV + SS S A + L NL S++N
Sbjct: 206 EAAVSVLFELSKSEALCEKIGSIHGAIILLVGLTSSKSENVSTVEKADKTLTNLERSEEN 265
Query: 495 VVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEMELTDHHKASLLEGNVLGPLLHLVSR 554
V QMA + LL +L G K+ MA L + L + K ++ V L+ L+
Sbjct: 266 VRQMAINGRLQPLLAKLLEGSPETKVSMAFYLGVLALNNDVKV-IVAQTVGSSLIDLMRT 324
Query: 555 GDIQMKKVAVKALRNLSSVPQNGLQMIKEGAVGPLVDLLLHHSSSSSSLREETATAIMHL 614
D+ ++ A+ AL N+SS + +I G + PL+ L + + +R + +A +
Sbjct: 325 RDMSQREAALGALNNISSFEGSAKLLINTGILPPLIKDLFYVGPNQLPIRLKEVSATILA 384
Query: 615 AVSTMYQESSQTPV----TLLESDKEIFMLFSLINLTGPNVQQRILQTFNALCRSP-SAG 669
+ + + + PV L S++ + L L + TGP +Q ++L L P S
Sbjct: 385 NIVNIGYDFDKVPVGPHHQTLVSEEIVENLLQLTSNTGPEIQGKLLAVLVGLTSCPNSVI 444
Query: 670 NIKTTLTQCSAIPVLVQLCE-HDNENVRANAVKLFCCLVDDGDEAI---IREHVGQKCLE 725
N+ + + +AI LVQ E H+N+++R ++KL + E + +R VGQ L
Sbjct: 445 NVVSAIRNSAAIISLVQFVEIHENDDLRLASIKLLHNISPHMSEELANALRSTVGQ--LG 502
Query: 726 TLVTIIQSSHN--EEEIASAMGILSKLPEVP-QFTQWLLDAGALPIVLNFLKNGRQNDPN 782
+LV+II + EE A+A G+L++LPE T LL GA +++ + RQ +
Sbjct: 503 SLVSIISENTPTITEEQAAAAGLLAELPERDLVLTMRLLREGAFEKIISKIVGIRQGEIR 562
Query: 783 --RFQ--VVENAVGALRRFTAPTNLEWQKR--AAEAGVIPKLVQLLEYGTTLTKEHA-AT 835
RF+ +E V L R T E E + + LL+ + + A AT
Sbjct: 563 GIRFERTFLEGLVSILARITFALTKETDATLFCCEKNLPSLFLDLLQSNSQDNIQRASAT 622
Query: 836 SLARFSKNSLGLSR----PIPKR--KGFWCFSPPPEI--GCQVHGGLCGIESSFCLLEAN 887
+L S S L++ P P F C S PP + C++H G+C + SFCL+E
Sbjct: 623 ALENLSLESKNLTKIPELPPPTYCVSIFSCLSKPPVVLGICKIHQGICSVRESFCLVEGQ 682
Query: 888 AVRPLVRVLEDPDHGACEASLDALVTLIE-GERLQNGSKVLEDANAIDRMVR-FLSSPSP 945
AV LV +L+ + +L AL TL+E G + G +++++A+ I ++ L + +
Sbjct: 683 AVDKLVDLLDHENDKVVGPALAALSTLLEDGLDVVQGVRLIDEADGITPILNVLLENRTE 742
Query: 946 KLQEKALDSVERIFRLPEFKQKYG--KSAQMPLVDLTQRGNSSMKSLSARVLAHLNVLQD 1003
L+ +A+ VERI R+ E ++ G ++ LVD Q + + ++ + L H++ + +
Sbjct: 743 NLRIRAVWMVERILRIEEIAREVGEEQNVTAALVDAFQNADFRTRQIAEKALRHIDKIPN 802
Query: 1004 QSSYF 1008
S F
Sbjct: 803 FSGIF 807
>sp|Q9LM76|PUB44_ARATH U-box domain-containing protein 44 OS=Arabidopsis thaliana GN=PUB44
PE=1 SV=1
Length = 801
Score = 244 bits (624), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 226/779 (29%), Positives = 383/779 (49%), Gaps = 40/779 (5%)
Query: 264 QSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNN-----LCPLTMTVLDTSILRPN 318
++F CP+T++VM DPV +G+TFER AIEKWF + + CPLT L ++ + +
Sbjct: 25 EAFICPLTKEVMHDPVTLENGRTFEREAIEKWFKECRDSGRPPSCPLTSQELTSTDVSAS 84
Query: 319 KTLRQSIEEWKDRNTMITIASMKPKLVSTEVE-EVLHCLEQLQDLCQQRDQHREWVILEN 377
LR +IEEW+ RN + + L E ++L L ++ +C+ +R V
Sbjct: 85 IALRNTIEEWRSRNDAAKLDIARQSLFLGNAETDILQALMHVRQICRTIRSNRHGVRNSQ 144
Query: 378 YIPKLIYLLGSKNRDVRNRALIILHILVKDSNDTKERLANGDDAVESIVRSLGRRIEE-R 436
I +I +L S + VR +AL L ++V+ +++K +A G D V ++V+ L + R
Sbjct: 145 LIHMIIDMLKSTSHRVRYKALQTLQVVVEGDDESKAIVAEG-DTVRTLVKFLSHEPSKGR 203
Query: 437 KLAVALLLELSTCNTLRDQIGDVQGCILLLVTMASSDDNQAS--RDAQELLENLSFSDDN 494
+ AV+LL ELS L ++IG + G ++LLV + SS+ S A LEN+ S++
Sbjct: 204 EAAVSLLFELSKSEALCEKIGSIHGALILLVGLTSSNSENVSIVEKADRTLENMERSEEI 263
Query: 495 VVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEMELTDHHKASLLEGNVLGPLLHLVSR 554
V QMA + LL +L G K+ MA+ L E+ L + K L+ V L+ L+
Sbjct: 264 VRQMASYGRLQPLLGKLLEGSPETKLSMASFLGELPLNNDVKV-LVAQTVGSSLVDLMRS 322
Query: 555 GDIQMKKVAVKALRNLSSVPQNGLQMIKEGAVGPLVDLLLHHSSSSSSLR-EETATAIMH 613
GD+ ++ A+KAL +SS + +I +G + PL+ L + ++ +R +E + I+
Sbjct: 323 GDMPQREAALKALNKISSFEGSAKVLISKGILPPLIKDLFYVGPNNLPIRLKEVSATILA 382
Query: 614 LAVSTMYQESSQTPVTLLESDKEIFMLFSLINLTGPNVQQRILQTFNALCRSP-SAGNIK 672
V+ Y T L S+ + L LI+ TGP +Q ++L+ L P + +
Sbjct: 383 NIVNIGYDFDKAT----LVSENRVENLLHLISNTGPAIQCKLLEVLVGLTSCPKTVPKVV 438
Query: 673 TTLTQCSAIPVLVQLCE-HDNENVRANAVKLFCCLVDDGDEAIIREHVGQKC-LETLVTI 730
+ AI LVQ E +N+++R ++KL L E + + G L +LV I
Sbjct: 439 YAIKTSGAIISLVQFIEVRENDDLRLASIKLLHNLSPFMSEELAKALCGTAGQLGSLVAI 498
Query: 731 I--QSSHNEEEIASAMGILSKLPEVPQFTQWLLDAGALPIVLNFLKNGRQNDPNRFQVVE 788
I ++ EE+ A+A + TQ +L+ GA +++ + RQ D + V
Sbjct: 499 ISEKTPITEEQAAAAGLLAELPDRDLGLTQEMLEVGAFEKIISKVFGIRQGDIKGMRFVN 558
Query: 789 NAVGALRRFTAPTNLEWQKRA------AEAGVIPKLVQLLEY-GTTLTKEHAATSLARFS 841
+ L R A + K A E V + LL+ G + +A +L S
Sbjct: 559 PFLEGLVRILARITFVFNKEARAINFCREHDVASLFLHLLQSNGQDNIQMVSAMALENLS 618
Query: 842 KNSLGLSR---PIPKRKG---FWCFSPPPEIG--CQVHGGLCGIESSFCLLEANAVRPLV 893
S+ L+R P P F C P + C++H G+C + +FCL+E AV LV
Sbjct: 619 LESIKLTRMPDPPPVNYCGSIFSCVRKPHVVNGLCKIHQGICSLRETFCLVEGGAVEKLV 678
Query: 894 RVLEDPDHGACEASLDALVTLIE-GERLQNGSKVLEDANAIDRMVRFL-SSPSPKLQEKA 951
+L+ + EA+L AL +L+E G ++ G K+L++A+ I ++ L + + +L +A
Sbjct: 679 ALLDHENVKVVEAALAALSSLLEDGLDVEKGVKILDEADGIRHILNVLRENRTERLTRRA 738
Query: 952 LDSVERIFRLPEFKQKYG--KSAQMPLVDLTQRGNSSMKSLSARVLAHLNVLQDQSSYF 1008
+ VERI R+ + ++ +S LVD Q + + ++ L H++ + + SS F
Sbjct: 739 VWMVERILRIEDIAREVAEEQSLSAALVDAFQNADFRTRQIAENALKHIDKIPNFSSIF 797
>sp|Q9CAA7|PUB42_ARATH Putative U-box domain-containing protein 42 OS=Arabidopsis thaliana
GN=PUB42 PE=2 SV=1
Length = 1033
Score = 185 bits (469), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 219/895 (24%), Positives = 404/895 (45%), Gaps = 90/895 (10%)
Query: 176 RSYANHLLSLIADAVGISTERSALKKEFDEFKSEIENSRMRKDQAEAVQMDQIIALLERA 235
R + NH +++ + TE + + S+ ++ + K Q+++ ++ I + ++
Sbjct: 166 RKHGNH-----SESQSLVTEIPDIPSQSTNVSSQRKHGNLSKSQSQSTEIPDIPS---QS 217
Query: 236 DAASSPREKEMKYFSKRKSLG-----SQPLEP-LQSFYCPITRDVMVDPVETSSGQTFER 289
ASS R KY + +SL +Q +EP Q+F CP+T+++M DPV T +G T ER
Sbjct: 218 SNASSQR----KYGNLSESLSMLPQVTQFMEPPYQAFICPLTKEIMEDPVTTETGVTCER 273
Query: 290 SAIEKWFSDGNNL----CPLTMTVLDTSILRPNKTLRQSIEEWKDRN--TMITIASMKPK 343
A+ +WF N CP+T L T L N L+ I+EWK RN I +A
Sbjct: 274 QAVIEWFDSFGNSDEINCPVTGQKLTTE-LSANVVLKTIIQEWKVRNEAARIKVAHAALS 332
Query: 344 LVSTEVEEVLHCLEQLQDLCQQRDQHREWVILENYIPKLIYLLGSKNRDVRNRALIILHI 403
L +E V+ L LQ C+ ++ ++ V I L L +++DVR L L
Sbjct: 333 LGGSE-SMVIDALRDLQMTCEGKEYNKVQVREAGIIQLLDRYLTYRSKDVRFELLKFLRT 391
Query: 404 LVKDSNDTKERLANGDDAVESIVRSLGRRIEE-RKLAVALLLELSTCNTLRDQIGDVQGC 462
L + D + + + +++ LG + R A ALLLELS ++IG +G
Sbjct: 392 LADEETDDGKEMIVKTITMSCVIKLLGSSHQPVRHAAQALLLELSKSQHACEKIGTARGA 451
Query: 463 ILLLVTMASSD--DNQASRDAQELLENLSFSDDNVVQMAKANYFKHLLQRLSAGPESVKM 520
IL+LVT + D+ AS + ++L NL +N+ QMA++ + LL L+ G E ++
Sbjct: 452 ILMLVTAKYNRELDSFASETSDQILRNLEKCPENIKQMAESGLLEPLLGHLAEGSEETQV 511
Query: 521 RMATTLAEMELTDHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQM 580
MA L E+++ H K + + L+ LV +I ++ A KAL ++S N +
Sbjct: 512 AMAAYLVEIDI-GHEKKTYVAEKACPALIGLVQSENIDARRAAFKALAHISLYHPNNKIL 570
Query: 581 IKEGAVGPLVDLLLHHSSSSSSL--REETATAIMHLAVSTMYQESSQ--TPVTLLESDKE 636
++ G + +V+ + S + R E AT + ++ S + E+ + T L SD
Sbjct: 571 VEVGIIKIMVEEMFTKRVFSDLMNSRNEAATILANILESGLEHETFEVNTHGHTLGSDYF 630
Query: 637 IFMLFSLINLTGP-NVQQRILQTFNALCRSPSA-GNIKTTLTQCSAIPVLVQLCEHDNEN 694
++ + ++ + P ++ +++ +L +SP A I + + + A +++L + ++
Sbjct: 631 VYNIIHMLKNSSPDDLNIDLIRILLSLSKSPRAMATIVSVIKETDASFAMIELINNPHDE 690
Query: 695 VRANAVKLFCCLVDDGDEAIIREHVGQKCLETLVTI-----------IQSSHNEEEIASA 743
+ A+KL L ++G E L ++++ E+ A +
Sbjct: 691 LGVGALKLLIALTP---------YIGHTLSERLCKTRGQPENLIQCPVEANQITEKHAVS 741
Query: 744 MGILSKLPEVP-QFTQWLLDAGALPIVLNFL----KNGRQNDPNRFQVVENAVGALRRFT 798
+L+KLP L++ + +L+ + ++G + +E VG L RFT
Sbjct: 742 AKLLAKLPHQNLTLNLALVNESIVSEILHAIHLIQRSGARTSRYATDFLEGLVGILVRFT 801
Query: 799 A----PTNLEWQKRAAEAGVIPKLVQLLEYGTTLTKEHAATSLARFSKNSLGLSRPIPKR 854
P + + V L L++ + + +AT L S ++ LSRP R
Sbjct: 802 TTLYEPQMMYLARNHDLTSVFVDL--LMKTSSDEVQRLSATGLENLSSTTMTLSRPPQPR 859
Query: 855 --KGFWCFSPPPEIG-----------CQVHGGLCGIESSFCLLEANAVRPLVRVLEDPDH 901
K S P C +H G+C +++FCL+EANA+ L+ L+
Sbjct: 860 STKFMGSLSMPRSFSLRSSKKKQIEICAIHRGVCSAKNTFCLVEANAITKLLACLQSDKV 919
Query: 902 GACEASLDALVTLIEGE-RLQNGSKVLEDANAIDRMVRFLSSPSPK-LQEKALDSVER-I 958
E++L A+ TL++ + ++ +L + NA+ ++ + + L +KA +++ I
Sbjct: 920 EVVESALAAICTLLDDKVEVEKSLSMLSEMNAVQLILNAVKEHKKESLLQKAFWMIDKFI 979
Query: 959 FR-----LPEFKQKYGKSAQMPLVDLTQRGNSSMKSLSARVLAHLNVLQDQSSYF 1008
R E Q S LV RG+ + + ++ +L L+ + S+Y
Sbjct: 980 IRGGDKYASEISQDRMLSGM--LVSAFHRGDGNTRQMAENILRRLDKMPSFSTYI 1032
>sp|Q9SNC6|PUB13_ARATH U-box domain-containing protein 13 OS=Arabidopsis thaliana GN=PUB13
PE=1 SV=1
Length = 660
Score = 140 bits (352), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 150/612 (24%), Positives = 285/612 (46%), Gaps = 45/612 (7%)
Query: 15 ASEALSQIVEAILEVMIASNNVLIKKESFKELAAYLERIVPVLKELNKRDLSHSEGLNSA 74
A+++L +V I I+ + +KK + LA L+ +VP+ +E+ + + SE
Sbjct: 8 AAQSLIDVVNEI--AAISDYRITVKKLCYN-LARRLKLLVPMFEEIRESNEPISEDTLKT 64
Query: 75 IEILNREIKGAKELTTECSKRNKVYLLMNCRAIVKRLKDTAREISQALGILPLASLDLST 134
+ L + AK+ CS+ +K+YL+M + +L + + ++ Q+L +P LD+S
Sbjct: 65 LMNLKEAMCSAKDYLKFCSQGSKIYLVMEREQVTSKLMEVSVKLEQSLSQIPYEELDISD 124
Query: 135 DIIEEIEKVCDNMQRAEFRAAIAEEEILEKVESGIQERNVDRSYANHLLSLIADAVGIST 194
++ E++E V +RA+ R ++++E+ E ++S + ++ D +L +A + +
Sbjct: 125 EVREQVELVLSQFRRAKGRVDVSDDELYEDLQS-LCNKSSDVDAYQPVLERVAKKLHL-M 182
Query: 195 ERSALKKEFDEFKSEIENSRMRKDQAEAV-QMDQIIALLERADAASSPREKEMKYFSKRK 253
E L +E + +S D E + +M ++ +++ +E K +
Sbjct: 183 EIPDLAQESVALHEMVASS--GGDVGENIEEMAMVLKMIKDFVQTEDDNGEEQKVGVNSR 240
Query: 254 SLGSQ--------PLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPL 305
S G P+ P F CPI+ ++M DPV SSGQT+ER+ IEKW G++ CP
Sbjct: 241 SNGQTSTAASQKIPVIP-DDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPK 299
Query: 306 TMTVLDTSILRPNKTLRQSIEEWKDRNTM---ITIASMKPKLVST--------EVEEVLH 354
T L ++ L PN LR I +W + N + +S++P+ VS+ ++E+++
Sbjct: 300 TQQALTSTTLTPNYVLRSLIAQWCEANDIEPPKPPSSLRPRKVSSFSSPAEANKIEDLMW 359
Query: 355 CLE------------QLQDLCQQRDQHREWVILENYIPKLIYLLGSKNRDVRNRALIILH 402
L +++ L ++ +R + IP L+ LL + + ++ ++ L
Sbjct: 360 RLAYGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQEHSVTALL 419
Query: 403 ILVKDSNDTKERLANGDDAVESIVRSLGR-RIEERKLAVALLLELSTCNTLRDQIGDVQG 461
L N+ ++ G A+ IV+ L + +E R+ A A L LS + + IG + G
Sbjct: 420 NLSICENNKGAIVSAG--AIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGAL-G 476
Query: 462 CILLLVTMASSDDNQASRDAQELLENLSFSDDNVVQMAKANYFKHLLQRLSAGPESVKMR 521
I LV + + + +DA L NL N + +A L + L+ +
Sbjct: 477 AIPPLVVLLNEGTQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGMVDE 536
Query: 522 MATTLAEMELTDHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNL-SSVPQNGLQM 580
LA + KA + + + L+ + G + ++ A L +L S PQ+ ++
Sbjct: 537 ALAILAILSSHPEGKAIIGSSDAVPSLVEFIRTGSPRNRENAAAVLVHLCSGDPQHLVEA 596
Query: 581 IKEGAVGPLVDL 592
K G +GPL+DL
Sbjct: 597 QKLGLMGPLIDL 608
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 118/267 (44%), Gaps = 45/267 (16%)
Query: 760 LLDAGALPIVLNFLKNGRQNDPNRFQVVENAVGALRRFTAPTNLEWQKRA-AEAGVIPKL 818
+ +AGA+P+++ L P+ ++ E++V AL + N K A AG IP +
Sbjct: 390 IAEAGAIPLLVGLLST-----PDS-RIQEHSVTALLNLSICEN---NKGAIVSAGAIPGI 440
Query: 819 VQLLEYGTTLTKEHAATSLARFS-----KNSLGLSRPIPKRKGFWCFSPPPEIGCQVHGG 873
VQ+L+ G+ +E+AA +L S K ++G I PP + G
Sbjct: 441 VQVLKKGSMEARENAAATLFSLSVIDENKVTIGALGAI-----------PPLVVLLNEGT 489
Query: 874 LCGIESS------FCLLEAN---AVRP-----LVRVLEDPDHGACEASLDALVTLIEGER 919
G + + C+ + N A+R L R+L +P G + +L L L
Sbjct: 490 QRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGMVDEALAILAIL---SS 546
Query: 920 LQNGSKVLEDANAIDRMVRFLSSPSPKLQEKALDSVERIFRL-PEFKQKYGKSAQM-PLV 977
G ++ ++A+ +V F+ + SP+ +E A + + P+ + K M PL+
Sbjct: 547 HPEGKAIIGSSDAVPSLVEFIRTGSPRNRENAAAVLVHLCSGDPQHLVEAQKLGLMGPLI 606
Query: 978 DLTQRGNSSMKSLSARVLAHLNVLQDQ 1004
DL G K +A++L ++ L +Q
Sbjct: 607 DLAGNGTDRGKRKAAQLLERISRLAEQ 633
>sp|Q9ZV31|PUB12_ARATH U-box domain-containing protein 12 OS=Arabidopsis thaliana GN=PUB12
PE=2 SV=1
Length = 654
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 148/610 (24%), Positives = 274/610 (44%), Gaps = 49/610 (8%)
Query: 22 IVEAILEVMIASNNVLIKKESFKELAAYLERIVPVLKELNKRDLSHSEGLNSAIEILNRE 81
++++I E+ S++V K+ L+ L ++P+L+E+ S SE +N+ + + +
Sbjct: 13 LIDSINEIASISDSVTPMKKHCANLSRRLSLLLPMLEEIRDNQESSSEVVNALLSV-KQS 71
Query: 82 IKGAKELTTECSKRNKVYLLMNCRAIVKRLKDTAREISQALGILPLASLDLSTDIIEEIE 141
+ AK+L + S +K+YL++ ++ + + + QAL I+P +L++S ++ E++E
Sbjct: 72 LLHAKDLLSFVSHVSKIYLVLERDQVMVKFQKVTSLLEQALSIIPYENLEISDELKEQVE 131
Query: 142 KVCDNMQRAEFRAA--IAEEEILEKVES------GIQERNVDRSYANHL-LSLIADAVGI 192
V ++R+ + + ++E+ + V S + E ++ R A L L I D +
Sbjct: 132 LVLVQLRRSLGKRGGDVYDDELYKDVLSLYSGRGSVMESDMVRRVAEKLQLMTITD---L 188
Query: 193 STERSALKKEFDEFKSEIENSRMRKDQAEAVQ-MDQIIALLERADAASSPREKEMKY--- 248
+ E AL ++ +S D E+ + M ++ ++ +P +
Sbjct: 189 TQESLALL--------DMVSSSGGDDPGESFEKMSMVLKKIKDFVQTYNPNLDDAPLRLK 240
Query: 249 --FSKRKSLGSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLT 306
K + L P + F CPI+ ++M DPV SSGQT+ER I+KW G+ CP T
Sbjct: 241 SSLPKSRDDDRDMLIPPEEFRCPISLELMTDPVIVSSGQTYERECIKKWLEGGHLTCPKT 300
Query: 307 MTVLDTSILRPNKTLRQSIEEWKDRNTMITIASMKPKLVSTEVEEVLHCLEQLQDLCQQR 366
L + I+ PN LR I +W + N + +P + +
Sbjct: 301 QETLTSDIMTPNYVLRSLIAQWCESNGI--EPPKRPNISQPSSKAS-------SSSSAPD 351
Query: 367 DQHREWVILENYIPKLIYLLGSKNRDVRNRALIILHILVKDSNDTKERLANGDDAVESIV 426
D+H N I +L+ L S+ + R A + +L K +N + +A A+ +V
Sbjct: 352 DEH-------NKIEELLLKLTSQQPEDRRSAAGEIRLLAKQNNHNRVAIA-ASGAIPLLV 403
Query: 427 RSLGRRIEER--KLAVALLLELSTCNTLRDQIGDVQGCILLLVTMASSDDNQASRDAQEL 484
L + R + AV +L LS C + +I G + +V + +A +A
Sbjct: 404 NLLTISNDSRTQEHAVTSILNLSICQENKGKIVYSSGAVPGIVHVLQKGSMEARENAAAT 463
Query: 485 LENLSFSDDNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEMELTDHHKASLLEGNV 544
L +LS D+N V + A L+ LS G + K AT L + + +K + +
Sbjct: 464 LFSLSVIDENKVTIGAAGAIPPLVTLLSEGSQRGKKDAATALFNLCIFQGNKGKAVRAGL 523
Query: 545 LGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQMIKEGAVGPLVDLLLHHSSSSSSLR 604
+ L+ L++ + M ++ L LSS P ++ AV LVD + S S +
Sbjct: 524 VPVLMRLLTEPESGMVDESLSILAILSSHPDGKSEVGAADAVPVLVDFI---RSGSPRNK 580
Query: 605 EETATAIMHL 614
E +A ++HL
Sbjct: 581 ENSAAVLVHL 590
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 116/289 (40%), Gaps = 60/289 (20%)
Query: 724 LETLVTIIQSSHNEEEIASAMGILSKLPEVPQFTQWLLDAGALPIVLNFLKNGRQNDPNR 783
L L+TI S +E +++ LS E + + +GA+P +++ L+ G
Sbjct: 402 LVNLLTISNDSRTQEHAVTSILNLSICQE--NKGKIVYSSGAVPGIVHVLQKGS------ 453
Query: 784 FQVVENAVGALRRFTAPTNLEWQKRAAEAGVIPKLVQLLEYGTTLTKEHAATSLAR---F 840
+ ENA L F+ E + AG IP LV LL G+ K+ AAT+L F
Sbjct: 454 MEARENAAATL--FSLSVIDENKVTIGAAGAIPPLVTLLSEGSQRGKKDAATALFNLCIF 511
Query: 841 SKNSLGLSRPIPKRKGFWCFSPPPEIGCQVHGGLCGIESSFCLLEANAVRPLVRVLEDPD 900
N G V GL + L+R+L +P+
Sbjct: 512 QGNK----------------------GKAVRAGLVPV--------------LMRLLTEPE 535
Query: 901 HGACEASLDALVTLIEGERLQNGSKVLEDANAIDRMVRFLSSPSPKLQEKALDSVERIFR 960
G + SL L L +G + A+A+ +V F+ S SP+ +E +S +
Sbjct: 536 SGMVDESLSILAIL---SSHPDGKSEVGAADAVPVLVDFIRSGSPRNKE---NSAAVLVH 589
Query: 961 LPEFKQKYGKSAQM-----PLVDLTQRGNSSMKSLSARVLAHLNVLQDQ 1004
L + Q++ AQ L+++ + G K +A++L + DQ
Sbjct: 590 LCSWNQQHLIEAQKLGIMDLLIEMAENGTDRGKRKAAQLLNRFSRFNDQ 638
Score = 40.8 bits (94), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 99/237 (41%), Gaps = 43/237 (18%)
Query: 763 AGALPIVLNFLKNGRQNDPNRFQVVENAVGALRRFTAPTNLEWQKRAAEAGVIPKLVQLL 822
+GA+P+++N L ND +R Q E+AV ++ + K +G +P +V +L
Sbjct: 396 SGAIPLLVNLLT--ISND-SRTQ--EHAVTSILNLSI-CQENKGKIVYSSGAVPGIVHVL 449
Query: 823 EYGTTLTKEHAATSLARFSKNSLGLSRPIPKRKGFWCFSPPPEIGCQVHGGLCGIESSFC 882
+ G+ +E+AA +L FS + + E+
Sbjct: 450 QKGSMEARENAAATL--FSLSVID-------------------------------ENKVT 476
Query: 883 LLEANAVRPLVRVLEDPDHGACEASLDALVTLIEGERLQNGSKVLEDANAIDRMVRFLSS 942
+ A A+ PLV +L + G+ DA L Q A + ++R L+
Sbjct: 477 IGAAGAIPPLVTLLSE---GSQRGKKDAATALFNLCIFQGNKGKAVRAGLVPVLMRLLTE 533
Query: 943 PSPKLQEKALDSVERIFRLPEFKQKYGKSAQMP-LVDLTQRGNSSMKSLSARVLAHL 998
P + +++L + + P+ K + G + +P LVD + G+ K SA VL HL
Sbjct: 534 PESGMVDESLSILAILSSHPDGKSEVGAADAVPVLVDFIRSGSPRNKENSAAVLVHL 590
>sp|Q0IMG9|SL11_ORYSJ E3 ubiquitin-protein ligase SPL11 OS=Oryza sativa subsp. japonica
GN=SPL11 PE=1 SV=2
Length = 694
Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 127/525 (24%), Positives = 236/525 (44%), Gaps = 38/525 (7%)
Query: 96 NKVYLLMNCRAIVKRLKDTAREISQALGILPLASLDLSTDIIEEIEKVCDNMQRAEFRAA 155
+++ L++ +++K+ + ++ QAL +P LD+S ++ E++E V ++RA+ R
Sbjct: 108 SRISLVLERDSVMKKFQGVILQLEQALCDIPYNELDISDEVREQVELVHAQLKRAKERID 167
Query: 156 IAEEEILEKVESGIQERNVDRSYANHLLSLIADAVGISTERSALKKEFDEFKSEIENSRM 215
+ ++E + S + ++N D S +L +++ + + T ++ E+ S
Sbjct: 168 MPDDEFYNDLLS-VYDKNYDPSAELAILGRLSEKLHLMTITDLTQESL--ALHEMVASGG 224
Query: 216 RKDQAEAVQMDQIIALLERADAASSPREKEMKYFSKRKSLGS----QPLEPLQSFYCPIT 271
+D E ++++ LL++ + +M + L S +P+ F CPI+
Sbjct: 225 GQDPGE--HIERMSMLLKKIKDFVQTQNPDMGPPMASRVLDSNGDSRPITIPDEFRCPIS 282
Query: 272 RDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSIEEWKDR 331
++M DPV S+GQT+ER+ IEKW + G++ CP T + TS L PN LR I +W +
Sbjct: 283 LELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSALTPNYVLRSLISQWCET 342
Query: 332 NTM---------------------ITIASMKPKLVSTEVEEVLHCLEQLQDLCQQRDQHR 370
N M I ++ KL S + EE +L+ L ++ +R
Sbjct: 343 NGMEPPKRSTQPNKPTPACSSSERANIDALLSKLCSPDTEEQRSAAAELRLLAKRNANNR 402
Query: 371 EWVILENYIPKLIYLLGSKNRDVRNRALIILHILVKDSNDTKERLANGDDAVESIVRSL- 429
+ IP L+ LL S + + A+ L L ++ +++G AV SIV L
Sbjct: 403 ICIAEAGAIPLLLSLLSSSDLRTQEHAVTALLNLSIHEDNKASIISSG--AVPSIVHVLK 460
Query: 430 GRRIEERKLAVALLLELSTCNTLRDQIGDVQGCILLLVTMASSDDNQASRDAQELLENLS 489
+E R+ A A L LS + + IG + G I LV + + +DA L NL
Sbjct: 461 NGSMEARENAAATLFSLSVIDEYKVTIGGM-GAIPALVVLLGEGSQRGKKDAAAALFNLC 519
Query: 490 FSDDNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEMELTDH--HKASLLEGNVLGP 547
N + +A L+ L P M A + + L+ H KA++ +
Sbjct: 520 IYQGNKGRAIRAGLVP-LIMGLVTNPTGALMDEAMAILSI-LSSHPEGKAAIGAAEPVPV 577
Query: 548 LLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQMIKEGAVGPLVDL 592
L+ ++ G + ++ A + +L S + + + + G +V L
Sbjct: 578 LVEMIGSGTPRNRENAAAVMLHLCSGEHHLVHLARAQECGIMVPL 622
Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 760 LLDAGALPIVLNFLKNGRQNDPNRFQVVENAVGALRRFTAPTNLEWQKRAAEAGVIPKLV 819
++ +GA+P +++ LKNG + ENA L F+ E++ G IP LV
Sbjct: 446 IISSGAVPSIVHVLKNG------SMEARENAAATL--FSLSVIDEYKVTIGGMGAIPALV 497
Query: 820 QLLEYGTTLTKEHAATSL 837
LL G+ K+ AA +L
Sbjct: 498 VLLGEGSQRGKKDAAAAL 515
>sp|A2ZLU6|SL11_ORYSI Protein spotted leaf 11 OS=Oryza sativa subsp. indica GN=SPL11 PE=1
SV=2
Length = 694
Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 127/525 (24%), Positives = 236/525 (44%), Gaps = 38/525 (7%)
Query: 96 NKVYLLMNCRAIVKRLKDTAREISQALGILPLASLDLSTDIIEEIEKVCDNMQRAEFRAA 155
+++ L++ +++K+ + ++ QAL +P LD+S ++ E++E V ++RA+ R
Sbjct: 108 SRISLVLERDSVMKKFQGVILQLEQALCDIPYNELDISDEVREQVELVHAQLKRAKERID 167
Query: 156 IAEEEILEKVESGIQERNVDRSYANHLLSLIADAVGISTERSALKKEFDEFKSEIENSRM 215
+ ++E + S + ++N D S +L +++ + + T ++ E+ S
Sbjct: 168 MPDDEFYNDLLS-VYDKNYDPSAELAILGRLSEKLHLMTITDLTQESL--ALHEMVASGG 224
Query: 216 RKDQAEAVQMDQIIALLERADAASSPREKEMKYFSKRKSLGS----QPLEPLQSFYCPIT 271
+D E ++++ LL++ + +M + L S +P+ F CPI+
Sbjct: 225 GQDPGE--HIERMSMLLKKIKDFVQTQNPDMGPPMASRVLDSNGDSRPITIPDEFRCPIS 282
Query: 272 RDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSIEEWKDR 331
++M DPV S+GQT+ER+ IEKW + G++ CP T + TS L PN LR I +W +
Sbjct: 283 LELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSALTPNYVLRSLISQWCET 342
Query: 332 NTM---------------------ITIASMKPKLVSTEVEEVLHCLEQLQDLCQQRDQHR 370
N M I ++ KL S + EE +L+ L ++ +R
Sbjct: 343 NGMEPPKRSTQPNKPTPACSSSERANIDALLSKLCSPDTEEQRSAAAELRLLAKRNANNR 402
Query: 371 EWVILENYIPKLIYLLGSKNRDVRNRALIILHILVKDSNDTKERLANGDDAVESIVRSL- 429
+ IP L+ LL S + + A+ L L ++ +++G AV SIV L
Sbjct: 403 ICIAEAGAIPLLLSLLSSSDLRTQEHAVTALLNLSIHEDNKASIISSG--AVPSIVHVLK 460
Query: 430 GRRIEERKLAVALLLELSTCNTLRDQIGDVQGCILLLVTMASSDDNQASRDAQELLENLS 489
+E R+ A A L LS + + IG + G I LV + + +DA L NL
Sbjct: 461 NGSMEARENAAATLFSLSVIDEYKVTIGGM-GAIPALVVLLGEGSQRGKKDAAAALFNLC 519
Query: 490 FSDDNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEMELTDH--HKASLLEGNVLGP 547
N + +A L+ L P M A + + L+ H KA++ +
Sbjct: 520 IYQGNKGRAIRAGLVP-LIMGLVTNPTGALMDEAMAILSI-LSSHPEGKAAIGAAEPVPV 577
Query: 548 LLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQMIKEGAVGPLVDL 592
L+ ++ G + ++ A + +L S + + + + G +V L
Sbjct: 578 LVEMIGSGTPRNRENAAAVMLHLCSGEHHLVHLARAQECGIMVPL 622
Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 760 LLDAGALPIVLNFLKNGRQNDPNRFQVVENAVGALRRFTAPTNLEWQKRAAEAGVIPKLV 819
++ +GA+P +++ LKNG + ENA L F+ E++ G IP LV
Sbjct: 446 IISSGAVPSIVHVLKNG------SMEARENAAATL--FSLSVIDEYKVTIGGMGAIPALV 497
Query: 820 QLLEYGTTLTKEHAATSL 837
LL G+ K+ AA +L
Sbjct: 498 VLLGEGSQRGKKDAAAAL 515
>sp|Q5VRH9|PUB12_ORYSJ U-box domain-containing protein 12 OS=Oryza sativa subsp. japonica
GN=PUB12 PE=2 SV=1
Length = 611
Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 119/523 (22%), Positives = 216/523 (41%), Gaps = 90/523 (17%)
Query: 82 IKGAKELTTECSKRNKVYLLMNCRAIVKRLKDTAREISQALGILPLASLDLSTDIIEEIE 141
+ A++L + +K+ M A + R+I AL LP + + ++ E++
Sbjct: 56 LGAARDLLRKTRDGSKIDQAMRGDAFLDEFAGVNRQIHLALDALPYNTFHMPQEVQEQVA 115
Query: 142 KVCDNMQRAEFRAAIAEEEILEKVESGIQERNVDRSYANHLLSLIADAVGISTERSALKK 201
V QRA R + ++ + + + D + LL+ I+ + + T + +K
Sbjct: 116 LVHSQFQRASTRTDPPDTQLSMDLAWALTDNPSDPA----LLTRISHKLQLHT-MADMKN 170
Query: 202 EFDEFKSEIENSRMRKDQAEAVQMDQIIALLER----------ADAASSPREKEMKYFSK 251
E + + ++ D +DQ+ +LL++ A+ A + R +K+ S
Sbjct: 171 ESIALHNMVISTAGEPDGC----VDQMSSLLKKLKDCVVTEDHANDALTTRSASIKHRS- 225
Query: 252 RKSLGSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLD 311
P+ P F CPI+ ++M DPV SSGQT+ERS I+KW G+ CP T L
Sbjct: 226 -------PIIP-DEFRCPISLELMQDPVIVSSGQTYERSCIQKWLDSGHKTCPKTQQPLS 277
Query: 312 TSILRPNKTLRQSIEEWKDRNTMITIASMKPKLVSTEVEEVLHCLEQLQDLCQQRDQHRE 371
+ L PN L+ I +W + N +E ++ RD+
Sbjct: 278 HTSLTPNFVLKSLISQWCEANG----------------------IELPKNKQNSRDKK-- 313
Query: 372 WVILENYIPKLIYLLGSKNRDVRNRALIILHILVKDSNDTKERLANGDDAVESIVRSLGR 431
+K+ D + L+ L ++ N ++R A G+ +R L +
Sbjct: 314 ---------------AAKSSDYDHAGLVSLMNRLRSGNQDEQRAAAGE------IRLLAK 352
Query: 432 RIEERKLAVALLLELSTCNTLRDQIGDVQGCILLLVTMASSDDNQASRDAQELLENLSFS 491
R ++ +A G I LLV + SS D + A L NLS
Sbjct: 353 RNVNNRICIA-----------------EAGAIPLLVNLLSSSDPRTQEHAVTALLNLSIH 395
Query: 492 DDNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEMELTDHHKASLLEGNVLGPLLHL 551
++N + ++ +++ L G + A TL + + D +K ++ + PL++L
Sbjct: 396 ENNKASIVDSHAIPKIVEVLKTGSMETRENAAATLFSLSVVDENKVTIGAAGAIPPLINL 455
Query: 552 VSRGDIQMKKVAVKALRNLSSVPQNGLQMIKEGAVGPLVDLLL 594
+ G + KK A A+ NL N ++ +K G V L++ L+
Sbjct: 456 LCDGSPRGKKDAATAIFNLCIYQGNKVRAVKAGIVIHLMNFLV 498
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 98/207 (47%), Gaps = 33/207 (15%)
Query: 760 LLDAGALPIVLNFLKNGRQNDPNRFQVVENAVGALRRFTAPTNLEWQKRAAEAGVIPKLV 819
+ +AGA+P+++N L + +DP R Q E+AV AL + N + ++ IPK+V
Sbjct: 361 IAEAGAIPLLVNLLSS---SDP-RTQ--EHAVTALLNLSIHEN--NKASIVDSHAIPKIV 412
Query: 820 QLLEYGTTLTKEHAATSLARFS-----KNSLGLSRPIPKRKGFWCFSPPPEIGCQVHGGL 874
++L+ G+ T+E+AA +L S K ++G + IP C P G
Sbjct: 413 EVLKTGSMETRENAAATLFSLSVVDENKVTIGAAGAIPPLINLLCDGSP-------RGKK 465
Query: 875 CGIESSF--CLLEANAVRP--------LVRVLEDPDHGACEASLDALVTLIEGERLQNGS 924
+ F C+ + N VR L+ L DP G + +L +L++++ G G
Sbjct: 466 DAATAIFNLCIYQGNKVRAVKAGIVIHLMNFLVDPTGGMIDEAL-SLLSILAGN--PEGK 522
Query: 925 KVLEDANAIDRMVRFLSSPSPKLQEKA 951
V+ + I +V + + SP+ +E A
Sbjct: 523 IVIARSEPIPPLVEVIKTGSPRNRENA 549
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 107/250 (42%), Gaps = 33/250 (13%)
Query: 762 DAGALPIVLNFLKNGRQNDPNRFQVVENAVGALRRFTAPTNLEWQKRAAEAGVIPKLVQL 821
D L ++N L++G Q++ + A R A N+ + AEAG IP LV L
Sbjct: 321 DHAGLVSLMNRLRSGNQDE-------QRAAAGEIRLLAKRNVNNRICIAEAGAIPLLVNL 373
Query: 822 LEYGTTLTKEHAATSLARFS-----KNSLGLSRPIPK-----RKGFWCFSPPPEIGCQVH 871
L T+EHA T+L S K S+ S IPK + G E
Sbjct: 374 LSSSDPRTQEHAVTALLNLSIHENNKASIVDSHAIPKIVEVLKTGSM------ETRENAA 427
Query: 872 GGLCGI----ESSFCLLEANAVRPLVRVLEDPDHGACEASLDALVTLIEGERLQNGSKVL 927
L + E+ + A A+ PL+ +L D G+ DA T I + G+KV
Sbjct: 428 ATLFSLSVVDENKVTIGAAGAIPPLINLLCD---GSPRGKKDA-ATAIFNLCIYQGNKVR 483
Query: 928 E-DANAIDRMVRFLSSPSPKLQEKALDSVERIFRLPEFKQKYGKSAQM-PLVDLTQRGNS 985
A + ++ FL P+ + ++AL + + PE K +S + PLV++ + G+
Sbjct: 484 AVKAGIVIHLMNFLVDPTGGMIDEALSLLSILAGNPEGKIVIARSEPIPPLVEVIKTGSP 543
Query: 986 SMKSLSARVL 995
+ +A +L
Sbjct: 544 RNRENAAAIL 553
>sp|Q9C7R6|PUB17_ARATH U-box domain-containing protein 17 OS=Arabidopsis thaliana GN=PUB17
PE=2 SV=1
Length = 729
Score = 109 bits (273), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 116/475 (24%), Positives = 208/475 (43%), Gaps = 56/475 (11%)
Query: 85 AKELTTECSKRNKVYLLMNCRAIVKRLKDTAREISQALGILPLASLDLSTDIIEEIEKVC 144
+K L C++ +K++LL+ +I D +EIS L +LP+ L LS DI E+IE +
Sbjct: 117 SKILVDYCAQSSKLWLLLQNPSISGYFHDLNQEISTLLDVLPVNDLGLSDDIREQIELLQ 176
Query: 145 DNMQRAEFRAAIAEEEILEKVES---GIQERNVDRSYANHLLSLIADAVGISTERSALKK 201
++A +E + E S G + + S L + +GI +S +
Sbjct: 177 RQSRKARLYIDKNDESLRESFYSFLDGFENGKIPSSV--DLRMFFVEKLGIRDSKSC-RS 233
Query: 202 EFDEFKSEIENSRMRKDQAEAVQMDQIIALLERA---------DAA-----SSPREKEMK 247
E + + +I N + +V ++ +A+ D ++P++
Sbjct: 234 EIEFLEEQIVNHDGDLEPTGSV-INGFVAITRYCRFLLFGFEEDGMEWWIENNPKKPRKG 292
Query: 248 YFSKRKSLGSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTM 307
+ ++ +G + + F CPI+ D+M DPV S+GQT++R++I +W +G+ CP T
Sbjct: 293 FVAQE--IGDTFITVPKDFVCPISLDLMTDPVIISTGQTYDRNSIARWIEEGHCTCPKTG 350
Query: 308 TVLDTSILRPNKTLRQSIEEWKDRNTMI-----------TIASMKPKLVSTEVEE--VLH 354
+L S + PN+ L+ I +W + + + AS P + E + V
Sbjct: 351 QMLMDSRIVPNRALKNLIVQWCTASGISYESEFTDSPNESFASALPTKAAVEANKATVSI 410
Query: 355 CLEQLQD---------------LCQQRDQHREWVILENYIPKLIYLLGSKNRDVR-NRAL 398
++ L D L + ++R ++ IP L LL S+N + N
Sbjct: 411 LIKYLADGSQAAQTVAAREIRLLAKTGKENRAYIAEAGAIPHLCRLLTSENAIAQENSVT 470
Query: 399 IILHILVKDSNDTKERLANGDDAVESIVRSL--GRRIEERKLAVALLLELSTCNTLRDQI 456
+L++ + + N K R+ D +ESIV L G +E ++ A A L LS + + +I
Sbjct: 471 AMLNLSIYEKN--KSRIMEEGDCLESIVSVLVSGLTVEAQENAAATLFSLSAVHEYKKRI 528
Query: 457 GDVQGCILLLVTMASSDDNQASRDAQELLENLSFSDDNVVQMAKANYFKHLLQRL 511
V C+ L + + + +DA L NLS DN +M + L+ L
Sbjct: 529 AIVDQCVEALALLLQNGTPRGKKDAVTALYNLSTHPDNCSRMIEGGGVSSLVGAL 583
Score = 36.2 bits (82), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 94/229 (41%), Gaps = 15/229 (6%)
Query: 461 GCILLLVTMASSDDNQASRDAQELLENLSFSDDNVVQ-MAKANYFKHLLQRLSAG--PES 517
G I L + +S++ A ++ + NLS + N + M + + + ++ L +G E+
Sbjct: 448 GAIPHLCRLLTSENAIAQENSVTAMLNLSIYEKNKSRIMEEGDCLESIVSVLVSGLTVEA 507
Query: 518 VKMRMATTLAEMELTDHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNG 577
+ AT + + ++ K + + L L+ G + KK AV AL NLS+ P N
Sbjct: 508 QENAAATLFSLSAVHEYKKRIAIVDQCVEALALLLQNGTPRGKKDAVTALYNLSTHPDNC 567
Query: 578 LQMIKEGAVGPLVDLLLHHSSSSSSLREETATAIMHLAVSTMYQESSQTPVTLLESDKEI 637
+MI+ G V LV L + + + L + +E D +
Sbjct: 568 SRMIEGGGVSSLVGALKNEGVAEEAAGALALLVRQSLGAEAIGKE-----------DSAV 616
Query: 638 FMLFSLINLTGPNVQQRILQTFNALCRSPSAGNIKTTLTQCSAIPVLVQ 686
L ++ P ++ + LCRS A + + + AI L+Q
Sbjct: 617 AGLMGMMRCGTPRGKENAVAALLELCRSGGAA-VAEKVLRAPAIAGLLQ 664
>sp|Q681N2|PUB15_ARATH U-box domain-containing protein 15 OS=Arabidopsis thaliana GN=PUB15
PE=2 SV=2
Length = 660
Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 124/486 (25%), Positives = 215/486 (44%), Gaps = 54/486 (11%)
Query: 39 KKESFKELAAYLERIVPVLKELNKRDLSHSEGLNSAIEILNREIKGAKELTTECSKRNKV 98
+KE F L L+ ++P L E+ + S + L + AK+L CS +K+
Sbjct: 75 QKECFN-LVRRLKILIPFLDEIRGFE---SPSCKHFLNRLRKVFLAAKKLLETCSNGSKI 130
Query: 99 YLLMNCRAIVKRLKDTAREISQALGILPLASLDLSTDIIEEIEKVCDNMQRAEFRAAIAE 158
Y+ ++ ++ R ++++ L P L +S D +EI+ +C +++A+ R +
Sbjct: 131 YMALDGETMMTRFHSIYEKLNRVLVKAPFDELMISGDAKDEIDSLCKQLKKAKRRTDTQD 190
Query: 159 EEI---LEKVESGIQERNVDRSYANHLLSLIADAVGISTERSALKKEF---DEFKSE--- 209
E+ + V S RN D + ER A K E D+ K+E
Sbjct: 191 IELAVDMMVVFSKTDPRNADSAI---------------IERLAKKLELQTIDDLKTETIA 235
Query: 210 IENSRMRKDQAEAVQMDQIIALLERADAASSPREKEMKY---FSKRKSLGSQPLEPLQSF 266
I++ K II LL + ++ Y +K + + + P F
Sbjct: 236 IQSLIQDKGGLNIETKQHIIELLNKFKKLQGLEATDILYQPVINKAITKSTSLILP-HEF 294
Query: 267 YCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSIE 326
CPIT ++M+DPV ++GQT+E+ +I+KWF G+ CP T LD L PN L+ I
Sbjct: 295 LCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQELDHLSLAPNFALKNLIM 354
Query: 327 EWKDRNTM-ITIASMKPK---------------LVSTEVEEVLHCLEQLQDLCQQRDQHR 370
+W ++N I + P L S+++EE ++Q++ L ++ ++R
Sbjct: 355 QWCEKNNFKIPEKEVSPDSQNEQKDEVSLLVEALSSSQLEEQRRSVKQMRLLARENPENR 414
Query: 371 EWVILENYIPKLIYLLGSKNRDVRNRALIILHILVKDSNDTKERLANGDDAVESIVRSL- 429
+ IP L+ LL + ++ A+ L L D + ++L + + A+ +I+ L
Sbjct: 415 VLIANAGAIPLLVQLLSYPDSGIQENAVTTLLNLSID--EVNKKLISNEGAIPNIIEILE 472
Query: 430 -GRRIEERKLAVALLLELSTCNTLRDQIGDVQGCILLLVTMASSDDNQASRDAQELLENL 488
G R E R+ + A L LS + + IG G I LV + + +DA L NL
Sbjct: 473 NGNR-EARENSAAALFSLSMLDENKVTIGLSNG-IPPLVDLLQHGTLRGKKDALTALFNL 530
Query: 489 SFSDDN 494
S + N
Sbjct: 531 SLNSAN 536
Score = 33.5 bits (75), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 25/46 (54%)
Query: 796 RFTAPTNLEWQKRAAEAGVIPKLVQLLEYGTTLTKEHAATSLARFS 841
R A N E + A AG IP LVQLL Y + +E+A T+L S
Sbjct: 404 RLLARENPENRVLIANAGAIPLLVQLLSYPDSGIQENAVTTLLNLS 449
>sp|Q9LZW3|PUB16_ARATH U-box domain-containing protein 16 OS=Arabidopsis thaliana GN=PUB16
PE=2 SV=1
Length = 674
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 108/447 (24%), Positives = 197/447 (44%), Gaps = 45/447 (10%)
Query: 86 KELTTECSKRNKVYLLMNCRAIVKRLKDTAREISQALGILPLASLDLS---TDIIEEIEK 142
K L +CS+ +K++LL+ + + ++S L ILPL DLS D+I + K
Sbjct: 104 KSLIDDCSRVSKLWLLLQIDIVAFNFHELVTDLSTVLDILPLHDFDLSDDAQDLISLLTK 163
Query: 143 VC-DNMQRAEFRAAIAEEEILEKVESGIQERNVDRSYANHLLSLIADAVGISTERSALKK 201
C D++Q + R ++ + + + + D S L+ + D +G+S + ++L
Sbjct: 164 QCSDSVQFVDARDVALRRKVTDTIAGIKHQISPDHST---LIKIFND-LGLS-DSASLTD 218
Query: 202 EFDEFKSEIENSRMRKDQAEAVQMDQIIALLERADAASSPREKEMKYFSKRKSLGSQPLE 261
E + EI++ + ++ A + I L+ + F + +SL +
Sbjct: 219 EIQRLEDEIQDQIDDRSKSAAASL---IGLVRYSKCVLYGPSTPAPDFRRHQSLSDANIP 275
Query: 262 PLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTL 321
F CPIT ++M DPV ++GQT++R +I+ W G+N CP T VL + L PN+ L
Sbjct: 276 --ADFRCPITLELMRDPVVVATGQTYDRESIDLWIQSGHNTCPKTGQVLKHTSLVPNRAL 333
Query: 322 RQSIEEW-KDRN----------------------TMITIASMKPKLVSTEVEEVLHCLEQ 358
+ I W +D+ T + ++ + KL + V+ +
Sbjct: 334 KNLIVLWCRDQKIPFELYGDGGGEPAPCKEAVEFTKMMVSFLIEKLSVADSNGVVF---E 390
Query: 359 LQDLCQQRDQHREWVILENYIPKLIYLLGSKNRDVR-NRALIILHILVKDSNDTKERLAN 417
L+ L + R + IPKL+ L ++ ++ N IL++ + + N K R+
Sbjct: 391 LRALAKSDTVARACIAEAGAIPKLVRYLATECPSLQINAVTTILNLSILEQN--KTRIME 448
Query: 418 GDDAVESIVRSL--GRRIEERKLAVALLLELSTCNTLRDQIGDVQGCILLLVTMASSDDN 475
D A+ ++ L G E + A A L L+ + R ++G + LV +A
Sbjct: 449 TDGALNGVIEVLRSGATWEAKANAAATLFSLAGVSAYRRRLGRKARVVSGLVDLAKQGPT 508
Query: 476 QASRDAQELLENLSFSDDNVVQMAKAN 502
+ RDA + NL +NV + +A
Sbjct: 509 SSKRDALVAILNLVAERENVGRFVEAG 535
>sp|O80742|PUB19_ARATH U-box domain-containing protein 19 OS=Arabidopsis thaliana GN=PUB19
PE=2 SV=1
Length = 686
Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 107/434 (24%), Positives = 193/434 (44%), Gaps = 49/434 (11%)
Query: 86 KELTTECSKRN-KVYLLMNCRAIVKRLKDTAREISQALGILPLASLDLSTDIIEEIEKVC 144
K L +C++ K+Y+LMN + +D R IS +L P+ S+DL ++ E I V
Sbjct: 102 KFLLDDCTRDGAKLYMLMNSGQVSAHFRDLTRSISTSLDTFPVRSVDLPGEVNELIYLVM 161
Query: 145 DNMQRAEFRAAIAEEEILEKVE--SGIQERNVDRSYANHLLSLIADAVGISTERSALKKE 202
+++E R ++ ++ V + E ++ + ++ +L ++ D +G+ R +K E
Sbjct: 162 RQTRKSEARPDRDDKRAIDSVYWFFNLFENRINPN-SDEILRVL-DHIGVRKWRDCVK-E 218
Query: 203 FDEFKSEIENSRMRKDQAEAVQMDQIIA--------LLERADAASSPREKEMKYFSKRKS 254
D + EI S +K E + ++ +L D ++KE +S
Sbjct: 219 IDFLREEI--SVGKKSNIEIELLSNLMGFICYCRCVILRGIDVDDEEKDKEEDDLMMVRS 276
Query: 255 LGSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSI 314
L L CPI+ ++M DPV SG T++RS+I KWF+ GN CP T L +++
Sbjct: 277 LNVDDLR------CPISLEIMSDPVVLESGHTYDRSSITKWFASGNITCPKTGKTLVSTV 330
Query: 315 LRPNKTLRQSIEEWKDRNTMITIASMKPK-----------------------LVSTEVEE 351
L N +++Q I+ + +N ++ K K L+ + EE
Sbjct: 331 LVDNFSVKQVIQSYSKQNGVVMGQKGKKKVDVAESLAAEEAGKLTAEFLAGELIKGDEEE 390
Query: 352 VLHCLEQLQDLCQQRDQHREWVILENYIPKLIYLLGSKNRDVRNRALIILHILVKDSNDT 411
++ L +++ L + +R ++ + L+ +L S + ++ A+ + L KD
Sbjct: 391 MVKALVEIRILTKTSTFYRSCLVEAGVVESLMKILRSDDPRIQENAMAGIMNLSKDIAGK 450
Query: 412 KERLANGDDAVESIVRSL--GRRIEERKLAVALLLELSTCNTLRDQIGDVQGCILLLVTM 469
+ + IV L G R E R+ A A L LS+ IG++ I LV +
Sbjct: 451 TRIVGEDGGGLRLIVEVLNDGARRESRQYAAAALFYLSSLGDYSRLIGEISDAIPGLVRI 510
Query: 470 ASSDD--NQASRDA 481
S D + A R+A
Sbjct: 511 VKSCDYGDSAKRNA 524
>sp|Q8GUG9|PUB11_ARATH U-box domain-containing protein 11 OS=Arabidopsis thaliana GN=PUB11
PE=2 SV=2
Length = 612
Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 162/351 (46%), Gaps = 31/351 (8%)
Query: 266 FYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSI 325
F CP++ ++M DPV ++GQT+ER+ I++W GN CP T L+ L PN LR I
Sbjct: 245 FLCPVSLELMKDPVIVATGQTYERAYIQRWIDCGNLTCPKTQQKLENFTLTPNYVLRSLI 304
Query: 326 EEW-----------------KDRNTMITIASMKPKLVSTEVEEVLHCLEQLQDLCQQRDQ 368
W K+ M I ++ +L S E+ + + +++ L ++
Sbjct: 305 SRWCAEHNIEQPAGYINGRTKNSGDMSVIRALVQRLSSRSTEDRRNAVSEIRSLSKRSTD 364
Query: 369 HREWVILENYIPKLIYLLGSKNRDVRNRALI-ILHILVKDSNDTKERLANGDDAVESIVR 427
+R + IP L+ LL S++ + A+ +L++ + ++N A AV SIV+
Sbjct: 365 NRILIAEAGAIPVLVNLLTSEDVATQENAITCVLNLSIYENNKELIMFAG---AVTSIVQ 421
Query: 428 SL-GRRIEERKLAVALLLELSTCNTLRDQIGDVQGCILLLVTMASSDDNQASRDAQELLE 486
L +E R+ A A L LS + + IG G I LV + + + +DA L
Sbjct: 422 VLRAGTMEARENAAATLFSLSLADENKIIIGG-SGAIPALVDLLENGTPRGKKDAATALF 480
Query: 487 NLSFSDDNVVQMAKANYFKHLLQRLSAGPESVKMRMA----TTLAEMELTDHHKASLLEG 542
NL N + +A L++ LS +S + RM T L+ + K+++++
Sbjct: 481 NLCIYHGNKGRAVRAGIVTALVKMLS---DSTRHRMVDEALTILSVLANNQDAKSAIVKA 537
Query: 543 NVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQMI-KEGAVGPLVDL 592
N L L+ ++ + ++ A L +L L I + GAV PL+DL
Sbjct: 538 NTLPALIGILQTDQTRNRENAAAILLSLCKRDTEKLITIGRLGAVVPLMDL 588
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 83/175 (47%), Gaps = 5/175 (2%)
Query: 424 SIVRSLGRRI-----EERKLAVALLLELSTCNTLRDQIGDVQGCILLLVTMASSDDNQAS 478
S++R+L +R+ E+R+ AV+ + LS +T + G I +LV + +S+D
Sbjct: 331 SVIRALVQRLSSRSTEDRRNAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLLTSEDVATQ 390
Query: 479 RDAQELLENLSFSDDNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEMELTDHHKAS 538
+A + NLS ++N + A ++Q L AG + A TL + L D +K
Sbjct: 391 ENAITCVLNLSIYENNKELIMFAGAVTSIVQVLRAGTMEARENAAATLFSLSLADENKII 450
Query: 539 LLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQMIKEGAVGPLVDLL 593
+ + L+ L+ G + KK A AL NL N + ++ G V LV +L
Sbjct: 451 IGGSGAIPALVDLLENGTPRGKKDAATALFNLCIYHGNKGRAVRAGIVTALVKML 505
Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 52/261 (19%), Positives = 118/261 (45%), Gaps = 16/261 (6%)
Query: 457 GDVQGCILLLVTMASSDDNQASRDAQELLENLS-FSDDNVVQMAKANYFKHLLQRLSAGP 515
GD+ I LV SS + R+A + +LS S DN + +A+A L+ L++
Sbjct: 328 GDMS-VIRALVQRLSSRSTEDRRNAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLLTSED 386
Query: 516 ESVKMRMATTLAEMELTDHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQ 575
+ + T + + + +++K ++ + ++ ++ G ++ ++ A L +LS +
Sbjct: 387 VATQENAITCVLNLSIYENNKELIMFAGAVTSIVQVLRAGTMEARENAAATLFSLSLADE 446
Query: 576 NGLQMIKEGAVGPLVDLLLHHSSSSSSLREETATAIMHLAVSTMYQESSQTPVTLLESDK 635
N + + GA+ LVDLL + + +++ ATA+ +L + Y + V
Sbjct: 447 NKIIIGGSGAIPALVDLLENGTPRG---KKDAATALFNLCI---YHGNKGRAV------- 493
Query: 636 EIFMLFSLINLTGPNVQQRIL-QTFNALCRSPSAGNIKTTLTQCSAIPVLVQLCEHDNEN 694
++ +L+ + + + R++ + L + + K+ + + + +P L+ + + D
Sbjct: 494 RAGIVTALVKMLSDSTRHRMVDEALTILSVLANNQDAKSAIVKANTLPALIGILQTDQTR 553
Query: 695 VRANAVKLFCCLVDDGDEAII 715
R NA + L E +I
Sbjct: 554 NRENAAAILLSLCKRDTEKLI 574
Score = 33.9 bits (76), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 108/263 (41%), Gaps = 42/263 (15%)
Query: 543 NVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQMIKE-GAVGPLVDLLLHHSSSSS 601
+V+ L+ +S + ++ AV +R+LS + +I E GA+ LV+LL +S
Sbjct: 331 SVIRALVQRLSSRSTEDRRNAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLL---TSEDV 387
Query: 602 SLREETATAIMHLAVSTMYQESSQTPVTLLESDKEIFMLFSLINLTGPNVQQRILQTFNA 661
+ +E T +++L++ E++KE+ M + ++ Q +L+
Sbjct: 388 ATQENAITCVLNLSI--------------YENNKELIMFAGAVT----SIVQ-VLRAGTM 428
Query: 662 LCRSPSAGNI---------KTTLTQCSAIPVLVQLCEHDNENVRANA-VKLFCCLVDDGD 711
R +A + K + AIP LV L E+ + +A LF + G+
Sbjct: 429 EARENAAATLFSLSLADENKIIIGGSGAIPALVDLLENGTPRGKKDAATALFNLCIYHGN 488
Query: 712 EAIIREHVGQKCLETLVTIIQSSHNEEEIASAMGILSKLPEVPQFTQWLLDAGALPIVLN 771
+ V + LV ++ S + A+ ILS L ++ A LP ++
Sbjct: 489 KG---RAVRAGIVTALVKMLSDSTRHRMVDEALTILSVLANNQDAKSAIVKANTLPALIG 545
Query: 772 FLKNGRQNDPNRFQVVENAVGAL 794
L Q D R + ENA L
Sbjct: 546 IL----QTDQTRNR--ENAAAIL 562
>sp|Q8VZ40|PUB14_ARATH U-box domain-containing protein 14 OS=Arabidopsis thaliana GN=PUB14
PE=1 SV=1
Length = 632
Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 160/685 (23%), Positives = 276/685 (40%), Gaps = 141/685 (20%)
Query: 46 LAAYLERIVPVLKELNKRDLSHSEGLNSAIEILNREIKGAKELTTECSKRNKVYLLMNCR 105
L+ + E ++ V EL K ++ E + A++ + EL + +K++ L +
Sbjct: 47 LSPFFEELIDVNVELKKDQITGFEAMRIALD-------SSLELFRSVNGGSKLFQLFDRD 99
Query: 106 AIVKRLKDTAREISQALGILPLASLDLSTDIIEEIEKVCDNMQRAEFR-----------A 154
++V++ +D EI AL +P +++S ++ E+++ + +RA+ R
Sbjct: 100 SLVEKFRDMTVEIEAALSQIPYEKIEVSEEVREQVQLLHFQFKRAKERWEESDLQLSHDL 159
Query: 155 AIAEEE------ILEKVESGIQERNVDR----SYANH--LLSLIADAVGISTERSALKKE 202
A+AE IL+++ +Q +D S+A H LS D S+L K
Sbjct: 160 AMAENVMDPDPIILKRLSQELQLTTIDELKKESHAIHEYFLSYDGDPDDCFERMSSLLKN 219
Query: 203 FDEFKSEIENSRMRKDQAEAVQMDQIIALLERADAASSPREKEMKYFSKRKSLGSQPLEP 262
+F + +E +D S + S+ +S P+ P
Sbjct: 220 LVDFVT-----------------------MESSDPDPSTGSR---IVSRHRS----PVIP 249
Query: 263 LQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLR 322
+ F CPI+ ++M DPV S+GQT+ERS+I+KW G+ CP + L + L PN L+
Sbjct: 250 -EYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYVLK 308
Query: 323 QSIEEWKDRNTMITIASMKPKLVSTEVEEVLHCLEQLQDLCQQRDQHREWVILENYIPKL 382
I W + N + L Q Q C +
Sbjct: 309 SLIALWCESNGIE--------------------LPQNQGSC-----------------RT 331
Query: 383 IYLLGSKNRDVRNRALIILHILVKDSNDTKE--RLANGDDAVESIVRSLGRRIEERKLAV 440
+ GS + D +R +L +L K +N T E R A G+ +R L +R + ++ +
Sbjct: 332 TKIGGSSSSDC-DRTF-VLSLLEKLANGTTEQQRAAAGE------LRLLAKRNVDNRVCI 383
Query: 441 ALLLELSTCNTLRDQIGDVQGCILLLVTMASSDDNQASRDAQELLENLSFSDDNVVQMAK 500
A G I LLV + SS D + + L NLS ++ N +
Sbjct: 384 A-----------------EAGAIPLLVELLSSPDPRTQEHSVTALLNLSINEGNKGAIVD 426
Query: 501 ANYFKHLLQRLSAGPESVKMRMATTLAEMELTDHHKASLLEGNVLGPLLHLVSRGDIQMK 560
A +++ L G + A TL + + D +K ++ + L+ L+ G + K
Sbjct: 427 AGAITDIVEVLKNGSMEARENAAATLFSLSVIDENKVAIGAAGAIQALISLLEEGTRRGK 486
Query: 561 KVAVKALRNLSSVPQNGLQMIKEGAVGPLVDLLLHHSSSSSSLREETATAIMHLAVSTMY 620
K A A+ NL N + +K G V PL LL + + +E A+ LA+ +
Sbjct: 487 KDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLL---KDAGGGMVDE---ALAILAILSTN 540
Query: 621 QESSQTPVTLLESDKEIFMLFSLINLTGPNVQQRILQTFNALCRSPSAGNIK--TTLTQC 678
QE +T + ES I +L +I P ++ LC GNI+ +
Sbjct: 541 QE-GKTAIAEAES---IPVLVEIIRTGSPRNRENAAAILWYLC----IGNIERLNVAREV 592
Query: 679 SAIPVLVQLCEHDNENVRANAVKLF 703
A L +L E+ + + A L
Sbjct: 593 GADVALKELTENGTDRAKRKAASLL 617
Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 96/244 (39%), Gaps = 58/244 (23%)
Query: 760 LLDAGALPIVLNFLKNGRQNDPNRFQVVENAVGALRRFTAPTNLEWQKRAAEAGVIPKLV 819
++DAGA+ ++ LKNG + ENA L F+ E + AG I L+
Sbjct: 424 IVDAGAITDIVEVLKNGS------MEARENAAATL--FSLSVIDENKVAIGAAGAIQALI 475
Query: 820 QLLEYGTTLTKEHAATSLARFSKNSLGLSRPIPKRKGFWCFSPPPEIGCQVHGGLCGIES 879
LLE GT K+ AAT++ SR V GG+
Sbjct: 476 SLLEEGTRRGKKDAATAIFNLCIYQGNKSRA-------------------VKGGI----- 511
Query: 880 SFCLLEANAVRPLVRVLEDPDHGACEASLDALVTLIEGERLQNGSKVLEDANAIDRMVRF 939
V PL R+L+D G + +L L L Q G + +A +I +V
Sbjct: 512 ---------VDPLTRLLKDAGGGMVDEALAILAILSTN---QEGKTAIAEAESIPVLVEI 559
Query: 940 LSSPSPKLQEKA--------LDSVERIFRLPEFKQKYGKSAQMPLVDLTQRGNSSMKSLS 991
+ + SP+ +E A + ++ER+ E A + L +LT+ G K +
Sbjct: 560 IRTGSPRNRENAAAILWYLCIGNIERLNVAREV------GADVALKELTENGTDRAKRKA 613
Query: 992 ARVL 995
A +L
Sbjct: 614 ASLL 617
Score = 34.7 bits (78), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 790 AVGALRRFTAPTNLEWQKRAAEAGVIPKLVQLLEYGTTLTKEHAATSLARFSKN 843
A G LR A N++ + AEAG IP LV+LL T+EH+ T+L S N
Sbjct: 365 AAGELR-LLAKRNVDNRVCIAEAGAIPLLVELLSSPDPRTQEHSVTALLNLSIN 417
>sp|O48700|PUB6_ARATH U-box domain-containing protein 6 OS=Arabidopsis thaliana GN=PUB6
PE=2 SV=2
Length = 771
Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 156/662 (23%), Positives = 275/662 (41%), Gaps = 111/662 (16%)
Query: 23 VEAILEVMIASNNVLIKKESFKELAAYLER---IVPVLKELNKRDLSHSEGLNSAIEILN 79
V + E + A+++ + + KEL+A + I P L+E R S + L S L+
Sbjct: 3 VSELEENLFAASDAKLHGDMCKELSAVYCKVLSIFPSLEEARPRSKSGIQTLCS----LH 58
Query: 80 REIKGAKELTTECSKRNKVYLLMNCRAIVKRLKDTAREISQAL----GILPLASLDLSTD 135
++ AK + CS+ +K+YL + A++ + + + +L I+P + D
Sbjct: 59 IALEKAKNILQHCSECSKLYLAITGDAVLLKFEKAKSALIDSLRRVEDIVPSSIGSQILD 118
Query: 136 IIEEIEKVCDNMQRAEFRAAIAEEEILEKV----ESGIQERNVDRSYANHLLSLIADAVG 191
I+ E+E +F +E+E+ +++ + G + N S + A +
Sbjct: 119 IVGELE-------HTKFLLDPSEKEVGDRIIALLQQGKKFDNGSDSTELEIFHQAATRLS 171
Query: 192 ISTERSALKKEFDEFKSEIENSRMRKDQAEAVQMDQIIALLER----------------- 234
I++ RSAL E K I+ +R+ +D+ + + ++ L+ +
Sbjct: 172 ITSSRSALA-ERRALKKVIDRARVEEDKRKESIVAYLLHLMRKYSKLFRSEMMDENDSPC 230
Query: 235 ----ADAASSPREKEMKYF----SKRKSLGSQPLE---------PLQSFYCPITRDVMVD 277
+ P E + F SK S+ +P+ P + CPI+ +M D
Sbjct: 231 STPCSPTGQGPNEDRVNAFGRQLSKFGSINYKPMNSRKSGQMPIPPEELRCPISLQLMYD 290
Query: 278 PVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSIEEWKDRNTMITI 337
PV +SGQT+ER IEKWFSDG+N CP T L L PN ++ I W ++N IT+
Sbjct: 291 PVIIASGQTYERVCIEKWFSDGHNSCPKTQQQLPHLSLTPNYCVKGLIASWCEQNG-ITV 349
Query: 338 ASMKPKLV----------------STEVEEVLHC---------LEQLQDLCQQRDQHR-- 370
+ P+ + S V+ V C LE+ + +R Q
Sbjct: 350 PTGPPESLDLNYWRLAMSDSESPNSKSVDSVGLCTPKDIRVVPLEESSTIESERQQKEKN 409
Query: 371 --------EWVILENYIPKLIYLLGSKNRDVRNRALII--LHILVKDSNDTKERLANGDD 420
E +LE Y + I + K D+ + ++ + IL+KD N+ L +
Sbjct: 410 NAPDEVDSEINVLEGY--QDILAIVDKEEDLAKKCKVVENVRILLKD-NEEARILMGANG 466
Query: 421 AVESIVRSLGRRIEERKLAVA-----LLLELSTCNTLRDQIGDVQGCILLLVTMASSDDN 475
VE+ ++ L + + A L L+ N ++ G I LL M S +
Sbjct: 467 FVEAFLQFLESAVHDNNAAAQETGAMALFNLAVNNNRNKELMLTSGVIPLLEKMISCSQS 526
Query: 476 QASRDAQELLENLSFSDDN--VVQMAKA-NYFKHLLQRLSAGPESVKMRMATTLAEMELT 532
Q A L NLS + V+ ++A ++F +LL L K+ L +
Sbjct: 527 QGP--ATALYLNLSCLEKAKPVIGSSQAVSFFVNLL--LQDTKTQCKLDALHALYNLSTY 582
Query: 533 DHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQMI-KEGAVGPLVD 591
+ +LL N++ L L S G+ + ++ L NL+S + +MI +G + L
Sbjct: 583 SPNIPTLLSSNIIKSLQVLASTGNHLWIEKSLAVLLNLASSREGKEEMITTQGMISTLAT 642
Query: 592 LL 593
+L
Sbjct: 643 VL 644
>sp|Q9C9A6|PUB10_ARATH U-box domain-containing protein 10 OS=Arabidopsis thaliana GN=PUB10
PE=2 SV=1
Length = 628
Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 101/362 (27%), Positives = 158/362 (43%), Gaps = 40/362 (11%)
Query: 264 QSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQ 323
+ F CPI+ ++M DP S+GQT+ERS I++W GN CP T L+ L PN LR
Sbjct: 245 EDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFTLTPNYVLRS 304
Query: 324 SIEEW---------------KDRNT----------MITIASMKPKLVSTEVEEVLHCLEQ 358
I +W + +N+ M I ++ KL S +E+ + +
Sbjct: 305 LISQWCTKHNIEQPGGYMNGRTKNSDGSFRDLSGDMSAIRALVCKLSSQSIEDRRTAVSE 364
Query: 359 LQDLCQQRDQHREWVILENYIPKLIYLLGSKN--RDVRNRALIILHILVKDSNDTKERLA 416
++ L ++ +R + IP L+ LL S N IL++ + + N LA
Sbjct: 365 IRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGDTETQENAVTCILNLSIYEHNKELIMLA 424
Query: 417 NGDDAVESIVRSL-GRRIEERKLAVALLLELSTCNTLRDQIGDVQGCILLLVTMASSDDN 475
AV SIV L +E R+ A A L LS + + IG G I+ LV +
Sbjct: 425 G---AVTSIVLVLRAGSMEARENAAATLFSLSLADENKIIIG-ASGAIMALVDLLQYGSV 480
Query: 476 QASRDAQELLENLSFSDDNVVQMAKANYFKHLLQRLSAGPESVKMRMA----TTLAEMEL 531
+ +DA L NL N + +A K L++ L+ +S RMA T L+ +
Sbjct: 481 RGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLT---DSSSERMADEALTILSVLAS 537
Query: 532 TDHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQMIKE-GAVGPLV 590
K ++L N + PL+ + + + ++ A L L L I GAV PL+
Sbjct: 538 NQVAKTAILRANAIPPLIDCLQKDQPRNRENAAAILLCLCKRDTEKLISIGRLGAVVPLM 597
Query: 591 DL 592
+L
Sbjct: 598 EL 599
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 120/269 (44%), Gaps = 17/269 (6%)
Query: 450 NTLRDQIGDVQGCILLLVTMASSDDNQASRDAQELLENLS-FSDDNVVQMAKANYFKHLL 508
+ RD GD+ I LV SS + R A + +LS S DN + +A+A L+
Sbjct: 331 GSFRDLSGDMSA-IRALVCKLSSQSIEDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLV 389
Query: 509 QRLSA-GPESVKMRMATTLAEMELTDHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKAL 567
+ L++ G + T + + + +H+K ++ + ++ ++ G ++ ++ A L
Sbjct: 390 KLLTSDGDTETQENAVTCILNLSIYEHNKELIMLAGAVTSIVLVLRAGSMEARENAAATL 449
Query: 568 RNLSSVPQNGLQMIKEGAVGPLVDLLLHHSSSSSSLREETATAIMHLAVSTMYQESSQTP 627
+LS +N + + GA+ LVDLL + S +++ ATA+ +L + YQ +
Sbjct: 450 FSLSLADENKIIIGASGAIMALVDLLQYGSVRG---KKDAATALFNLCI---YQGNKGRA 503
Query: 628 VTLLESDKEIFMLFSLINLTGPNVQQRIL-QTFNALCRSPSAGNIKTTLTQCSAIPVLVQ 686
V ++ L+ + + +R+ + L S KT + + +AIP L+
Sbjct: 504 V-------RAGIVKPLVKMLTDSSSERMADEALTILSVLASNQVAKTAILRANAIPPLID 556
Query: 687 LCEHDNENVRANAVKLFCCLVDDGDEAII 715
+ D R NA + CL E +I
Sbjct: 557 CLQKDQPRNRENAAAILLCLCKRDTEKLI 585
>sp|Q9CAG5|PUB7_ARATH U-box domain-containing protein 7 OS=Arabidopsis thaliana GN=PUB7
PE=2 SV=1
Length = 782
Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 144/630 (22%), Positives = 268/630 (42%), Gaps = 99/630 (15%)
Query: 28 EVMIASNNVLIKKESFKELAAYLERIVPVLKELNKRDLSHSEGLNSAIEILNREIKGAKE 87
E + A+++ + + KEL+ L +++ + L G+ A+ L+ ++ AK
Sbjct: 8 ENLFAASDAKLHGDMCKELSGVLCKVLSIFPSLEGARPRSKSGIQ-ALCSLHIALEKAKN 66
Query: 88 LTTECSKRNKVYLLMNCRAIVKRLKDTAREISQALGILPLASLDLSTDIIEEIEKVCDNM 147
+ CS+ +K+YL + A++ LK +I+ G+ + + + + I +I ++ +
Sbjct: 67 ILQHCSECSKLYLAITGDAVL--LKFEKAKIALIDGLKRVEDI-VPSSIGSQILEIVGEL 123
Query: 148 QRAEFRAAIAEEEILEKVESGIQE-RNVDRSYANHLLSLI---ADAVGIST------ERS 197
+ F +E+E+ +++ + +Q+ + D N L + A + I++ ER
Sbjct: 124 ENTRFMLDPSEKEVGDQIIALLQQGKKFDNCNDNTELEIFHRAATRLSITSSRVALAERR 183
Query: 198 ALKKEFDEFKSEIENSRMRKDQAEAVQMDQIIALLERAD----------AASSPREKEM- 246
ALKK D ++E E+ R A + + + + L R++ SP E
Sbjct: 184 ALKKLIDRARAE-EDKRKESIVAYLLHLMRKCSKLFRSEILDENDSPGSYPCSPNEDHGS 242
Query: 247 -----KYFSKRKSLGSQPLE---------PLQSFYCPITRDVMVDPVETSSGQTFERSAI 292
+ S+ SL +P+ P + CPI+ +M DPV +SGQT+ER I
Sbjct: 243 VHGFGRQLSRFGSLNDKPMNSINSGQMPVPPEELRCPISLQLMCDPVIIASGQTYERVCI 302
Query: 293 EKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSIEEWKDRN-------------------- 332
EKWFSDG+N CP T L L PN ++ I W ++N
Sbjct: 303 EKWFSDGHNTCPKTQQQLPHISLTPNNCVKGLIASWCEQNGTQIPSGPPESQDLDYWRLA 362
Query: 333 ----------TMITIASMKPKLVSTEVEEVLHCLEQLQDLCQQRDQHREWV--------- 373
++ +I S K K V +++ E + ++++ +V
Sbjct: 363 LSDSESTKSQSVNSIGSYKLKGV-----KIVPLEENGTTVVERQNTEESFVSDDDDEEDS 417
Query: 374 ---ILENYIPKLIYLLGSKNRDVRNRALIILHILVKDSNDTKERLANGDDA-VESIVRSL 429
+LE Y L L + + + + + + +L+KD D + R+ G + VE+++R L
Sbjct: 418 DINVLERYQDLLAVLNEEEGLEKKCKVVEKIRLLLKD--DEEARIFMGANGFVEALLRFL 475
Query: 430 GRRIEERKLAVA-----LLLELSTCNTLRDQIGDVQGCILLLVTMASSDDNQASRDAQEL 484
G +++ A L L+ N ++ G I LL M SS ++ S A L
Sbjct: 476 GSAVDDNNAAAQDSGAMALFNLAVNNNRNKELMLTSGVIRLLEKMISSAESHGS--ATAL 533
Query: 485 LENLSFSDDNVVQMAKANYFKHLLQRLSAGPES-VKMRMATTLAEMELTDHHKASLLEGN 543
NLS D+ + + L+Q L E+ K+ L + + +LL N
Sbjct: 534 YLNLSCLDEAKSVIGSSQAVPFLVQLLQKEIETQCKLDALHALYNLSTYSPNIPALLSSN 593
Query: 544 VLGPLLHLV-SRGDIQMKKVAVKALRNLSS 572
++ L L+ S G+ + ++ L NL+S
Sbjct: 594 IIKSLQGLLASTGENLWIEKSLAVLLNLAS 623
>sp|Q9XIJ5|PUB18_ARATH U-box domain-containing protein 18 OS=Arabidopsis thaliana GN=PUB18
PE=2 SV=1
Length = 697
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 162/349 (46%), Gaps = 32/349 (9%)
Query: 9 SASTVPASEALSQIVEAILEVMIASNNVLIKKESFKELAAYLERIVPVLKELNKRDLS-- 66
S S V ++L Q+ IL S + K+SF+E ++ ++ V +E+ R +
Sbjct: 23 SISIVTLLDSLIQLAGDIL--TFKSKHFSTNKQSFRETLRRIQNLLVVFEEIRIRIRNSR 80
Query: 67 ---HSEGLNSAIEILNREIKGAKELTTECSKRN-KVYLLMNCRAIVKRLKDTAREISQAL 122
H S+++ ++ + K L +C++ ++ ++MN + L+ R IS +L
Sbjct: 81 RYFHDSAAASSLKEIHVGFQKLKFLLEDCTRDGARLCMMMNSDQVSDHLRVLTRSISTSL 140
Query: 123 GILPLASLDLSTDIIEEIEKVCDNMQRAEFRAAIAEEEILEKVESGIQERNVDRSYAN-H 181
P+AS+DL+T++ E I+ V ++ + ++ + + I V+R +
Sbjct: 141 SAFPVASVDLTTEVNELIDLVVRQARKYGVQPETNDKRAVSSINR-ILALFVNRVVPDPD 199
Query: 182 LLSLIADAVGISTERSALKKEFDEFKSEIENSRM---RKDQAEAVQMDQ----------- 227
++ I D VGI +K E + EI+ R+ +K ++ V++
Sbjct: 200 EINRILDHVGIRKWGDCVK-EINFLGEEIDAERLDEKKKKSSDQVELLSSLMGFICYCRC 258
Query: 228 -IIALLERADAASSPREKEMKYFSKRKSLGSQPLEPLQSFYCPITRDVMVDPVETSSGQT 286
I+ +ER D + + K + L ++ CPI+ ++M DPV +G T
Sbjct: 259 IILGRIERDDHHNHHEDGIKKDHDLIRGL------KVEDLLCPISLEIMTDPVVIETGHT 312
Query: 287 FERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSIEEWKDRNTMI 335
++RS+I KWF GN CP+T +L ++ L N ++RQ I + N ++
Sbjct: 313 YDRSSITKWFGSGNITCPITGKILTSTELVDNVSVRQVIRKHCKTNGIV 361
>sp|Q6EUK7|PUB04_ORYSJ U-box domain-containing protein 4 OS=Oryza sativa subsp. japonica
GN=PUB4 PE=2 SV=1
Length = 728
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 131/537 (24%), Positives = 232/537 (43%), Gaps = 70/537 (13%)
Query: 85 AKELTTECSKRNKVYLLMNCRAIVKRLKDTAREISQALGILPLASLDLSTDIIEEIEKVC 144
A+ L + + + + L+ + +D E++ L +LP ASL LS D ++
Sbjct: 111 AELLVSYVASAGRAWALLRSPHLAASFRDLDAELAVVLDVLPAASLRLSHDATGLLD--- 167
Query: 145 DNMQRAEFRAAIAEEEILEKVESGIQERNVD--RSY-----ANH--LLSLIADAVGISTE 195
+ RA R A + + E+ ++ER +D R + +H L SL+AD +GIST
Sbjct: 168 --LLRAHCRCR-APAQYHDPDEAALRERLMDALRQFDLGQPPDHPSLQSLLAD-MGISTA 223
Query: 196 RSALKKEFDEFKSEIENSRMRKDQAEAVQMDQIIALLERA-----DAASSPREKEMKYFS 250
S + E D + +I + +++ + + ++ALL D +++ ++
Sbjct: 224 ASC-RAEIDYLEEQILS---QEEDTDLPLVGSVLALLRYCLFAVFDPSNAKALRDWPLSG 279
Query: 251 KRKSLGS------QPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCP 304
R+ L S + F CPI+ D+M DPV S+GQT++R +I +W +G++ CP
Sbjct: 280 NRQRLLSIGGGDDTSFSVPKEFSCPISLDLMRDPVVASTGQTYDRPSIIQWIEEGHSTCP 339
Query: 305 LTMTVLDTSILRPNKTLRQSIEEW-------------------------KDRNTMITIAS 339
+ L L PN+ LR I +W R M +
Sbjct: 340 NSGQTLADHRLVPNRALRSLISQWCGVYGLQYDSPESNEGMAECVAASCSSRAAMEANKA 399
Query: 340 MKPKLV------STEVEEVLHCLEQLQDLCQQRDQHREWVILENYIPKLIYLLGSKNRDV 393
LV S V+ V ++++ L + Q+R ++ IP L LL S +
Sbjct: 400 TARILVRMLEDGSENVKAV--AAKEIRLLAKTGKQNRAFIADLGAIPLLCRLLLSNDWMA 457
Query: 394 RNRALI-ILHILVKDSNDTKERLANGDDAVESIVRSL--GRRIEERKLAVALLLELSTCN 450
+ A+ +L++ + + N K R+ + + IV L G E ++ A A L LS +
Sbjct: 458 QENAVTALLNLSIFEPN--KGRIMEQEGCLRLIVGVLQNGWTTEAKENAAATLFSLSVVH 515
Query: 451 TLRDQIGDVQGCILLLVTMASSDDNQASRDAQELLENLSFSDDNVVQMAKANYFKHLLQR 510
+ I + G + L +M + ++ +DA L NLS ++ +M ++ L+Q
Sbjct: 516 NFKKLIMNEPGAVEELASMLTKGTSRGKKDAVMALFNLSTHPESSARMLESCAVVALIQS 575
Query: 511 LSAGPESVKMRMATTLAEMELTDHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKAL 567
L S + A L + + H E V+ L+ L+ RG + K+ AV AL
Sbjct: 576 LRNDTVSEEAAGALALLMKQPSIVHLVGSSE-TVITSLVGLMRRGTPKGKENAVSAL 631
>sp|Q9SRT0|PUB9_ARATH U-box domain-containing protein 9 OS=Arabidopsis thaliana GN=PUB9
PE=1 SV=1
Length = 460
Score = 83.2 bits (204), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 80/145 (55%), Gaps = 8/145 (5%)
Query: 205 EFKSEIENSRMRKDQAEAVQMDQIIALLERADAASSPREKEMKYFSKRKSLGSQPLEPL- 263
E K E++ ++ D + + + I L DA S+ RE M+ +K SL + LE +
Sbjct: 19 ELKREMKKLLIKIDDEDDLGVQTIDQL---QDALSALREATMRKMAKSSSL--EMLETVS 73
Query: 264 --QSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTL 321
+ F CP++ ++M DPV +SGQT+++ I+KW S GN CP T VL + L PN +
Sbjct: 74 CPEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSGNRTCPKTQQVLPHTALTPNLLI 133
Query: 322 RQSIEEWKDRNTMITIASMKPKLVS 346
R+ I +W +N + T + P LV+
Sbjct: 134 REMISKWCKKNGLETKSQYHPNLVN 158
Score = 34.3 bits (77), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 516 ESVKMRMATTLAEMELTDHHKASLL--EGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSV 573
E ++ + TTL + + D L+ NV+ L+ + RG + + A A+ LS++
Sbjct: 229 EKLQEDVVTTLLNISIHDDSNKKLVCENPNVIPLLIDALRRGTVATRSNAAAAIFTLSAL 288
Query: 574 PQNGLQMIKEGAVGPLVDLL 593
N + + K G + PL+DLL
Sbjct: 289 DSNKVLIGKSGILKPLIDLL 308
>sp|Q9C7G1|PUB45_ARATH U-box domain-containing protein 45 OS=Arabidopsis thaliana GN=PUB45
PE=1 SV=1
Length = 768
Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 144/326 (44%), Gaps = 58/326 (17%)
Query: 53 IVPVLKELNKRDLSHSEGLNSAIEILNREIKGAKELTTECSKRNKVYLLMNCRAIVKRLK 112
I P L+ R S + L S +L + K + C++ +K+YL + ++V + +
Sbjct: 36 IFPSLEAARPRSKSGIQALCSLHVVLEK----VKNILRHCTESSKLYLAITGDSVVLKFE 91
Query: 113 DTAREISQALG-ILPLASLDLSTDIIEEIEKVCDNMQRAEFRAAIAEEEILEKVESGIQE 171
++ +L + + + + ++E + ++ EF AE+EI +++ +Q+
Sbjct: 92 KAKSSLTDSLRRVEDIVQQSIGSQLLE----ILMELENTEFSLDPAEKEIGDQIIGLLQQ 147
Query: 172 R-NVDRSYANHLLSLIADA---VGISTERSALKKEFDEFKSEIENSRMRKDQAEAVQMDQ 227
N + S N+ L + A +GI++ R+AL E K IE +RM D+ + +
Sbjct: 148 GGNFESSSDNNELEVFHQAATRLGITSSRAALT-ERRCLKKLIERARMEDDKRKESIVAY 206
Query: 228 IIALLERA-------------------------------DAASSPREKEMKYFS------ 250
++ L+ + DA ++++ S
Sbjct: 207 LLHLMRKYSKLFRSEIWDDNDSQGSSSLPCSPTIQGSIDDAHGRAFDRQLSKLSSFNFRS 266
Query: 251 ----KRKSLGSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLT 306
+R S S P E L+ CPI+ +M DPV +SGQT+ER IEKWFSDG+N CP T
Sbjct: 267 CNNNRRSSQMSVPPEELR---CPISLQLMYDPVIIASGQTYERICIEKWFSDGHNTCPKT 323
Query: 307 MTVLDTSILRPNKTLRQSIEEWKDRN 332
L L PN ++ I W ++N
Sbjct: 324 HQQLSHLCLTPNYCVKALISSWCEQN 349
>sp|O23225|PUB5_ARATH U-box domain-containing protein 5 OS=Arabidopsis thaliana GN=PUB5
PE=2 SV=3
Length = 718
Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 132/295 (44%), Gaps = 30/295 (10%)
Query: 45 ELAAYLERIVPVLKELNKRDLSHSEGLNSAIEILNREIKGAKELTTECSKRNKVYLLMNC 104
EL ++RI+ + ++ S G+ + + +L+ + K+L CS+ +K+Y+ +
Sbjct: 22 ELKRLVDRIMRIFPDIEDARPGCSSGIQT-LCLLHNALDKTKQLLQYCSESSKLYMAVTG 80
Query: 105 RAIVKRLKDTAREISQAL----GILPLASLDLSTDIIEEIEKVCDNMQRAEFRAAIAEEE 160
AI+ R + + Q L I+P + I++++ ++ +E A A E
Sbjct: 81 DAILARGSRAKKSLEQCLNDIRSIVPTILEIKISQIVQDLRSTQLTLEFSEEEAGKAIRE 140
Query: 161 ILEKVESGIQERNVDRSYANHLLSL-IADAVGISTERSALKKEFDEFKSEIENSRMRKDQ 219
+++K S + + + L L ++ I TER +LK ++ K +NS
Sbjct: 141 LMQKSTSSSASPDEIKDFHYAALKLQLSTPEAIVTERRSLKIICEDHK---QNS------ 191
Query: 220 AEAVQMDQIIALLERADAASSPREKEMKYFSKRKSLGSQPLEPLQSFYCPITRDVMVDPV 279
S + + + G+ P + F C ++R VM DPV
Sbjct: 192 -----------FTHHQSIDDSLHANAAEAEASEEHNGTLP----EKFKCTLSRTVMYDPV 236
Query: 280 ETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSIEEWKDRNTM 334
SSG TFER I+KWF +GN+ CP++ LD L+PN L+ I EW +N +
Sbjct: 237 IISSGNTFERMQIQKWFDEGNDSCPISKRKLDDFTLKPNVELKSQISEWCAKNGL 291
>sp|Q8GWV5|PUB3_ARATH U-box domain-containing protein 3 OS=Arabidopsis thaliana GN=PUB3
PE=2 SV=2
Length = 760
Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 131/267 (49%), Gaps = 25/267 (9%)
Query: 71 LNSAIEILNREIKGAKELTTECS-KRNKVYLLMNCRAIVKRLKDTAREISQALGILPLAS 129
L E L+ + A+E + S K +K++ + C ++ +++ + EIS+ L L L+
Sbjct: 62 LYKGCEDLDSVVNQAREFLEDWSPKLSKLFGVFQCEVLLGKVQTCSLEISRIL--LQLSQ 119
Query: 130 LDLSTDIIEEIEKVCDNMQRAEFRAAIAEEEILEKVESGI--QERNVDRSYANHLLSLIA 187
T ++ +E+ E + E ++E +E+ + Q+ ++ NHL S+I
Sbjct: 120 SSPVTSSVQSVERCVQ-----ETESFKQEGTLMELMENALRNQKDDITSLDNNHLESII- 173
Query: 188 DAVGISTERSALKKEFDEFKSEIENSRMRKDQAEAVQMDQIIALLERADAASSPREKEMK 247
+G+ + + LK+ K I S+ K + + Q +Q+I L+ RE +K
Sbjct: 174 QMLGLISNQDLLKESITVEKERIR-SQASKSEEDMEQTEQLIELV------LCIREHMLK 226
Query: 248 --YFSKRKSLGSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPL 305
+ K + P F CP++ ++M+DPV +SGQTF+R++I+KW +G +CP
Sbjct: 227 TEFLEVAKGISIPPY-----FRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPR 281
Query: 306 TMTVLDTSILRPNKTLRQSIEEWKDRN 332
T VL L PN T++ I W + N
Sbjct: 282 TRQVLTHQELIPNYTVKAMIASWLEAN 308
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 4/156 (2%)
Query: 439 AVALLLELSTCNTLRDQIGDVQGCILLLVTMASSDDNQASRDAQELLENLSFSDDNVVQM 498
+ A L LS R++IG I LV + + +DA L NLS + DN ++
Sbjct: 575 SAASLFSLSVLQVNRERIGQSNAAIQALVNLLGKGTFRGKKDAASALFNLSITHDNKARI 634
Query: 499 AKANYFKHLLQRLSAGPESVKMRMATTLAEMELTDHHKASLLEGNVLGPLL-HLVSRGDI 557
+A K+L++ L E V +A + + +A + EG + PLL V G
Sbjct: 635 VQAKAVKYLVELLDPDLEMVDKAVALLANLSAVGEGRQAIVREGGI--PLLVETVDLGSQ 692
Query: 558 QMKKVAVKALRNLS-SVPQNGLQMIKEGAVGPLVDL 592
+ K+ A L L + P+ +++EGA+ PLV L
Sbjct: 693 RGKENAASVLLQLCLNSPKFCTLVLQEGAIPPLVAL 728
>sp|Q9FXA4|PUB26_ARATH U-box domain-containing protein 26 OS=Arabidopsis thaliana GN=PUB26
PE=2 SV=1
Length = 421
Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 47/76 (61%), Gaps = 7/76 (9%)
Query: 260 LEPLQ-------SFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDT 312
LEPL F CPI+ D+M DPV S+GQT++R++I+ W + GN CP+T L
Sbjct: 5 LEPLDLGIQIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRVALSD 64
Query: 313 SILRPNKTLRQSIEEW 328
L PN TLR+ I+EW
Sbjct: 65 FTLIPNHTLRRLIQEW 80
>sp|Q9LSA6|PUB29_ARATH U-box domain-containing protein 29 OS=Arabidopsis thaliana GN=PUB29
PE=1 SV=1
Length = 415
Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 96/188 (51%), Gaps = 25/188 (13%)
Query: 266 FYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSI 325
F CPI+ DVM PV +G T++R++I++W GNN CP TM +L T PN TL++ I
Sbjct: 16 FKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLKTKDFVPNLTLQRLI 75
Query: 326 EEWKDR--------NTMITIASMKPKLVSTEVEEVLHCLEQLQDL------CQQRDQHRE 371
W D + ++ S + EV +L L L++L + D +RE
Sbjct: 76 NIWSDSIGRRHNGDSPVLNPPSGREVPTKEEVNVLLERLMSLENLMKIVRFVKDSDSNRE 135
Query: 372 WVILE-NYIPKLIYLLGSKNRDVRNRALIILHILVKDSNDT-KERLAN------GDDAVE 423
++ + ++P L+ ++ +K + L+I+ I + DS +ERL+N G D +
Sbjct: 136 FLSKKMEFVPMLVDIIRTKKTKIE---LVIMAIRILDSIKVDRERLSNLMLANDGGDCLT 192
Query: 424 SIVRSLGR 431
+I+ ++ R
Sbjct: 193 AILLAIQR 200
>sp|Q9SVC6|PUB22_ARATH E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana GN=PUB22
PE=1 SV=1
Length = 435
Score = 77.0 bits (188), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 4/100 (4%)
Query: 258 QPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKW-FSDGNNLCPLTMTVLDTSILR 316
Q +E F CPI+ D+M DPV S+G T++R +IEKW FS N CP+T V+ + L
Sbjct: 3 QEIEIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETDLT 62
Query: 317 PNKTLRQSIEEWKDRNTMITIASM---KPKLVSTEVEEVL 353
PN TLR+ I+ W N I + KP + +E+E+++
Sbjct: 63 PNHTLRRLIQSWCTLNASYGIERIPTPKPPICKSEIEKLI 102
>sp|Q9LXE3|PUB28_ARATH U-box domain-containing protein 28 OS=Arabidopsis thaliana GN=PUB28
PE=1 SV=1
Length = 409
Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 41/65 (63%)
Query: 266 FYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSI 325
F CPI+ DVM PV S+G T++R +I++W DGNN CP TM +L PN TL + I
Sbjct: 15 FKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQNKEFVPNLTLHRLI 74
Query: 326 EEWKD 330
+ W D
Sbjct: 75 DHWSD 79
>sp|Q5XEZ8|PUB2_ARATH U-box domain-containing protein 2 OS=Arabidopsis thaliana GN=PUB2
PE=2 SV=1
Length = 707
Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 130/284 (45%), Gaps = 21/284 (7%)
Query: 53 IVPVLKELNKRDLSHSEGLNSAIEILNREIKGAKE-LTTECSKRNKVYLLMNCRAIVKRL 111
I PVL+ L D + SE LN+ E L + + +E + +++ ++ ++ +L
Sbjct: 48 IKPVLENLIDSDAAPSELLNNGFEELAQYVDELREQFQSWQPLSTRIFYVLRIESLASKL 107
Query: 112 KDTAREISQALGILPLASLDLSTDIIEEIEKVCDNMQRAEFRAAIAEEEILEKVESGIQE 171
++++ E+ Q +L L D+I + C E +A +EI ++ +++
Sbjct: 108 RESSLEVFQ---LLKHCEQHLPADLISPSFEEC-----IELVKLVARDEISYTIDQALKD 159
Query: 172 RNVDRSYANHLLSLIADAVGISTERSALKKEFDEFKSEIENSRMRKDQAEAVQMDQIIAL 231
+ + +L IA++ G+ + + L E + E++ + + EA +D +I+L
Sbjct: 160 QKKGVGPTSEVLVKIAESTGLRSNQEILV-EGVVLTNMKEDAELTDNDTEAEYLDGLISL 218
Query: 232 LERADAASSPREKEMKYFSKRKSLGSQ-PLEPLQSFYCPITRDVMVDPVETSSGQTFERS 290
+ +Y S K + P+ F C ++ ++M DPV +SGQTFER
Sbjct: 219 TTQMH----------EYLSDIKQAQLRCPVRVPSDFRCSLSLELMTDPVIVASGQTFERV 268
Query: 291 AIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSIEEWKDRNTM 334
I+KW G +CP T L + L PN +R + W + N +
Sbjct: 269 FIQKWIDMGLMVCPKTRQALSHTTLTPNFIVRAFLASWCETNNV 312
Score = 60.5 bits (145), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 67/129 (51%), Gaps = 1/129 (0%)
Query: 466 LVTMASSDDNQASRDAQELLENLSFSDDNVVQMAKANYFKHLLQRLSAGP-ESVKMRMAT 524
LV++ S D + DA L NLS +D+N +A++ L+ L G E K A
Sbjct: 468 LVSLLYSTDERIQADAVTCLLNLSINDNNKSLIAESGAIVPLIHVLKTGYLEEAKANSAA 527
Query: 525 TLAEMELTDHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQMIKEG 584
TL + + + +K + E + PL+ L+ G + KK A AL NLS +N ++I+ G
Sbjct: 528 TLFSLSVIEEYKTEIGEAGAIEPLVDLLGSGSLSGKKDAATALFNLSIHHENKTKVIEAG 587
Query: 585 AVGPLVDLL 593
AV LV+L+
Sbjct: 588 AVRYLVELM 596
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 7/217 (3%)
Query: 379 IPKLIYLLGSKNRDVRNRALI-ILHILVKDSNDTKERLANGDDAVESI-VRSLGRRIEER 436
IP L+ LL S + ++ A+ +L++ + D+N K +A V I V G E +
Sbjct: 465 IPSLVSLLYSTDERIQADAVTCLLNLSINDNN--KSLIAESGAIVPLIHVLKTGYLEEAK 522
Query: 437 KLAVALLLELSTCNTLRDQIGDVQGCILLLVTMASSDDNQASRDAQELLENLSFSDDNVV 496
+ A L LS + +IG+ G I LV + S +DA L NLS +N
Sbjct: 523 ANSAATLFSLSVIEEYKTEIGEA-GAIEPLVDLLGSGSLSGKKDAATALFNLSIHHENKT 581
Query: 497 QMAKANYFKHLLQRLSAGPESVKMRMATTLAEMELTDHHKASLLEGNVLGPLLHLVSRGD 556
++ +A ++L++ + V+ + LA + K ++ E + L+ +V G
Sbjct: 582 KVIEAGAVRYLVELMDPAFGMVE-KAVVVLANLATVREGKIAIGEEGGIPVLVEVVELGS 640
Query: 557 IQMKKVAVKALRNL-SSVPQNGLQMIKEGAVGPLVDL 592
+ K+ A AL L + P+ +I+EG + PLV L
Sbjct: 641 ARGKENATAALLQLCTHSPKFCNNVIREGVIPPLVAL 677
Score = 50.4 bits (119), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 107/221 (48%), Gaps = 5/221 (2%)
Query: 375 LENYIPKLIYLLGSKNRDVRNRALIILHILVKDSNDTKERLANGDDAVESIVRSLGRRIE 434
+E + KLI L S + D + A + IL ++S D + +A + A+ S+V SL +
Sbjct: 419 IETEVKKLIDDLKSSSLDTQREATARIRILARNSTDNRIVIARCE-AIPSLV-SLLYSTD 476
Query: 435 ER--KLAVALLLELSTCNTLRDQIGDVQGCILLLVTMASSDDNQASRDAQELLENLSFSD 492
ER AV LL LS + + I + + L+ + + +A ++ L +LS +
Sbjct: 477 ERIQADAVTCLLNLSINDNNKSLIAESGAIVPLIHVLKTGYLEEAKANSAATLFSLSVIE 536
Query: 493 DNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEMELTDHHKASLLEGNVLGPLLHLV 552
+ ++ +A + L+ L +G S K AT L + + +K ++E + L+ L+
Sbjct: 537 EYKTEIGEAGAIEPLVDLLGSGSLSGKKDAATALFNLSIHHENKTKVIEAGAVRYLVELM 596
Query: 553 SRGDIQMKKVAVKALRNLSSVPQNGLQMIKEGAVGPLVDLL 593
M + AV L NL++V + + + +EG + LV+++
Sbjct: 597 DPA-FGMVEKAVVVLANLATVREGKIAIGEEGGIPVLVEVV 636
Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 126/330 (38%), Gaps = 92/330 (27%)
Query: 672 KTTLTQCSAIPVLVQLCEHDNENVRANAVKLFCCL-VDDGDEAIIREHVGQKCLETLVTI 730
+ + +C AIP LV L +E ++A+AV L ++D ++++I E + L+ +
Sbjct: 456 RIVIARCEAIPSLVSLLYSTDERIQADAVTCLLNLSINDNNKSLIAE---SGAIVPLIHV 512
Query: 731 IQSSHNEEEIASAMGILSKLPEVPQFTQWLLDAGALPIVLNFLKNGRQNDPNRFQVVENA 790
+++ + EE A++ L L V+E
Sbjct: 513 LKTGYLEEAKANSAATLFSL----------------------------------SVIE-- 536
Query: 791 VGALRRFTAPTNLEWQKRAAEAGVIPKLVQLLEYGTTLTKEHAATSLARFSKNSLGLSRP 850
E++ EAG I LV LL G+ K+ AAT+L S
Sbjct: 537 -------------EYKTEIGEAGAIEPLVDLLGSGSLSGKKDAATALFNLS--------- 574
Query: 851 IPKRKGFWCFSPPPEIGCQVHGGLCGIESSFCLLEANAVRPLVRVLEDPDHGACEASLDA 910
+H E+ ++EA AVR LV ++ DP G E A
Sbjct: 575 -------------------IHH-----ENKTKVIEAGAVRYLVELM-DPAFGMVE---KA 606
Query: 911 LVTLIEGERLQNGSKVLEDANAIDRMVRFLSSPSPKLQEKALDSVERI-FRLPEFKQKYG 969
+V L ++ G + + I +V + S + +E A ++ ++ P+F
Sbjct: 607 VVVLANLATVREGKIAIGEEGGIPVLVEVVELGSARGKENATAALLQLCTHSPKFCNNVI 666
Query: 970 KSAQM-PLVDLTQRGNSSMKSLSARVLAHL 998
+ + PLV LT+ G + K + +L +
Sbjct: 667 REGVIPPLVALTKSGTARGKEKAQNLLKYF 696
>sp|Q9FLF4|PUB27_ARATH U-box domain-containing protein 27 OS=Arabidopsis thaliana GN=PUB27
PE=2 SV=1
Length = 420
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%)
Query: 266 FYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSI 325
F CPI+ DVM PV +G T++R++I++W GNN CP TM +L PN+TL++ I
Sbjct: 14 FRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQNKDFIPNRTLQRLI 73
Query: 326 EEWKD 330
E W D
Sbjct: 74 EIWSD 78
>sp|C6L7U1|LIN1_LOTJA Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus japonicus
GN=CERBERUS PE=2 SV=2
Length = 1485
Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
Query: 254 SLGSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTS 313
S+GS+P P + F CPIT + DPV +GQT+ER AI++W GN CP+T L S
Sbjct: 506 SMGSKP--P-KDFVCPITGQIFCDPVTLETGQTYERKAIQEWLRTGNTTCPITRQPLSAS 562
Query: 314 IL-RPNKTLRQSIEEWKDRN 332
IL + N L++ I WK++N
Sbjct: 563 ILPKTNYVLKRLITSWKEQN 582
>sp|D1FP57|LIN2_LOTJA Putative E3 ubiquitin-protein ligase LIN-2 OS=Lotus japonicus
GN=LIN PE=1 SV=1
Length = 1485
Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
Query: 254 SLGSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTS 313
S+GS+P P + F CPIT + DPV +GQT+ER AI++W GN CP+T L S
Sbjct: 506 SMGSKP--P-KDFVCPITGQIFCDPVTLETGQTYERKAIQEWLRTGNTTCPITRQPLSAS 562
Query: 314 IL-RPNKTLRQSIEEWKDRN 332
IL + N L++ I WK++N
Sbjct: 563 ILPKTNYVLKRLITSWKEQN 582
>sp|O22193|PUB4_ARATH U-box domain-containing protein 4 OS=Arabidopsis thaliana GN=PUB4
PE=1 SV=3
Length = 826
Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 134/293 (45%), Gaps = 24/293 (8%)
Query: 43 FKELAAYLERIVPVLKELNKRDLSHSEGLNSAIEILNREIKGAKELTTECSK-RNKVYLL 101
+K + L + P+ + D E L A E L +++ + +L +KVY +
Sbjct: 29 YKRVEELLRVLKPIADVVVTSDFVFDEKLGKAFEELTQDVDQSIDLFRSWQAFSSKVYFV 88
Query: 102 MNCRAIVKRLKDTAREISQALGILPLASLDLSTDIIE--EIEKVCDNMQRAEFRAAIAEE 159
+ +++ +++DT + Q L ++S + D + +E+ + ++ + E
Sbjct: 89 LQIESLLPKMRDTIVDTFQFL----MSSKNHLPDELSPASLEQCLEKIKHLSY------E 138
Query: 160 EILEKVESGIQERNVDRSYANHLLSLIADAVGISTERSALKKEFDEFKSEIENSRMRKDQ 219
EI ++ ++++ + +L I + G+ + + L E + + E + ++
Sbjct: 139 EISSVIDGALRDQRDGVGPSPEILVKIGENTGLRSNQEILI-EAVALERQKEMAEQSENN 197
Query: 220 AEAVQMDQIIALLERADAASSPREKEMKYFSKRKSLGSQPLEPLQSFYCPITRDVMVDPV 279
AE +DQ+I ++ R E K+ S + L F+CP++ +VM DPV
Sbjct: 198 AEVEFLDQLIVIVNRM--------HERLLLIKQTQTSSVAI--LADFFCPLSLEVMTDPV 247
Query: 280 ETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSIEEWKDRN 332
SSGQT+E++ I++W G +CP T L + L PN T++ I W + N
Sbjct: 248 IVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLTHTTLIPNYTVKALIANWCETN 300
Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 95/192 (49%), Gaps = 1/192 (0%)
Query: 403 ILVKDSNDTKERLANGDDAVESIVRSL-GRRIEERKLAVALLLELSTCNTLRDQIGDVQG 461
I+ SN+T+ L+ + V+ +V L ++ ++ A A L L+ N + G
Sbjct: 524 IVSAPSNETRRDLSEVETQVKKLVEELKSSSLDTQRQATAELRLLAKHNMDNRIVIGNSG 583
Query: 462 CILLLVTMASSDDNQASRDAQELLENLSFSDDNVVQMAKANYFKHLLQRLSAGPESVKMR 521
I+LLV + S D+ +A L NLS +D+N +A A + L+ L G K
Sbjct: 584 AIVLLVELLYSTDSATQENAVTALLNLSINDNNKKAIADAGAIEPLIHVLENGSSEAKEN 643
Query: 522 MATTLAEMELTDHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQMI 581
A TL + + + +K + + +GPL+ L+ G + KK A AL NLS +N ++
Sbjct: 644 SAATLFSLSVIEENKIKIGQSGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQENKAMIV 703
Query: 582 KEGAVGPLVDLL 593
+ GAV L+DL+
Sbjct: 704 QSGAVRYLIDLM 715
>sp|D1FP53|LIN_MEDTR Putative E3 ubiquitin-protein ligase LIN OS=Medicago truncatula
GN=LIN PE=2 SV=1
Length = 1488
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 10/130 (7%)
Query: 210 IENSRMRKDQAEAVQMDQ----IIALLERADAASSPREKEMKYFSK--RKSLGSQPLEPL 263
+ N+ RK+ ++ M+Q + L + + S + F K + ++GS+P P
Sbjct: 458 VRNNIKRKNDSQTPSMNQDNENSLVLNDSSHCESEDGYQSSSSFPKLEKLTIGSKP--P- 514
Query: 264 QSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSIL-RPNKTLR 322
+ F CPIT + DPV +GQT+ER AI++W GN CP+T L +IL + N L+
Sbjct: 515 KDFVCPITGQIFSDPVTLETGQTYERKAIQEWLGTGNTTCPITRQALSANILPKTNYVLK 574
Query: 323 QSIEEWKDRN 332
+ I WK++N
Sbjct: 575 RLIVSWKEQN 584
>sp|Q9FHN9|PUB31_ARATH U-box domain-containing protein 31 OS=Arabidopsis thaliana GN=PUB31
PE=2 SV=1
Length = 444
Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 40/63 (63%)
Query: 266 FYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSI 325
F CPI+ + M DPV +GQT+ERS I KWF+ G+ CP TM L ++ PNKTL Q I
Sbjct: 64 FICPISLEPMQDPVTLCTGQTYERSNILKWFNIGHCTCPTTMQELWDDLVTPNKTLHQLI 123
Query: 326 EEW 328
W
Sbjct: 124 YTW 126
>sp|Q9LT79|PUB25_ARATH U-box domain-containing protein 25 OS=Arabidopsis thaliana GN=PUB25
PE=2 SV=1
Length = 421
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 104/221 (47%), Gaps = 26/221 (11%)
Query: 266 FYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNN-LCPLTMTVLDTSILRPNKTLRQS 324
F CPI+ ++M DPV +GQT++R++IE W S GNN CP+T L L PN TLR+
Sbjct: 18 FRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDFTLIPNHTLRRL 77
Query: 325 IEEW---KDRNTMITIASMKPKLVSTEVEEVLH-----------------CLEQLQDLCQ 364
I+EW N + I + K T V +L L +L+ +
Sbjct: 78 IQEWCVANRSNGVERIPTPKQPADPTSVRALLSQASAITGTHVSVRSRAAALRRLRGFAR 137
Query: 365 QRDQHREWVILENYIPKLIYLLGSK--NRDVRNRALIILHILVKDSNDTKERLANGDDAV 422
D++R + N LI +L S+ + ++ + +L +L +L + +++ V
Sbjct: 138 DSDKNRVLIAAHNATEILIKILFSETTSSELVSESLALLVMLPITEPNQFVSISSDPGRV 197
Query: 423 ESIVRSLGRRIEERKLAVALLLELSTCNTLRDQIGDVQGCI 463
E + R L E ++ A L+E+ + T + D++G I
Sbjct: 198 EFLTRLLFDSSIETRVNAAALIEIVSTGT---KSADLKGSI 235
>sp|Q9LU47|PUB53_ARATH Putative U-box domain-containing protein 53 OS=Arabidopsis thaliana
GN=PUB53 PE=3 SV=1
Length = 819
Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 59/111 (53%), Gaps = 18/111 (16%)
Query: 226 DQIIALLER----ADAASSPREKEMKYFSKRKSLGSQPLEPLQSFYCPITRDVMVDPVET 281
DQI+ +LE AD A R SL + P +P F+CP+ +DVM +P
Sbjct: 722 DQILPVLESLKKVADKA-------------RNSLSAAPSQPPSHFFCPLLKDVMKEPCIA 768
Query: 282 SSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSIEEWKDRN 332
+ G T++R AIE+W + + P+T + L L PN TL +I EW++RN
Sbjct: 769 ADGYTYDRRAIEEWM-ENHRTSPVTNSPLQNVNLLPNHTLYAAIVEWRNRN 818
>sp|Q5PNY6|PUB21_ARATH U-box domain-containing protein 21 OS=Arabidopsis thaliana GN=PUB21
PE=2 SV=1
Length = 435
Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 42/63 (66%)
Query: 266 FYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSI 325
F CPI+ D+M DPV S+G T++R +IE W + GN CP+T TVL T PN T+R+ I
Sbjct: 35 FQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNTVLTTFDQIPNHTIRKMI 94
Query: 326 EEW 328
+ W
Sbjct: 95 QGW 97
>sp|A0AUS0|WSDU1_DANRE WD repeat, SAM and U-box domain-containing protein 1 OS=Danio rerio
GN=wdsub1 PE=2 SV=1
Length = 487
Score = 70.1 bits (170), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 41/63 (65%)
Query: 266 FYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSI 325
F CPITR++M DPV + G ++ER AIE W S N P+T L T++L PN+TL+ +I
Sbjct: 421 FLCPITREIMKDPVIAADGYSYEREAIEAWISTKNRTSPMTNLPLQTTLLTPNRTLKMAI 480
Query: 326 EEW 328
W
Sbjct: 481 FRW 483
>sp|Q84TG3|PUB23_ARATH E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana GN=PUB23
PE=1 SV=1
Length = 411
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 4/92 (4%)
Query: 266 FYCPITRDVMVDPVETSSGQTFERSAIEKW-FSDGNNLCPLTMTVLDTSILRPNKTLRQS 324
F CPI+ ++M DPV S+G T++R +IEKW F+ N CP+T + + L PN TLR+
Sbjct: 16 FLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDADLTPNHTLRRL 75
Query: 325 IEEWKDRNTMIT---IASMKPKLVSTEVEEVL 353
I+ W N I + +P + +E+E+++
Sbjct: 76 IQSWCTLNASYGVERIPTPRPPICKSEIEKLI 107
>sp|Q9C8D1|PUB20_ARATH U-box domain-containing protein 20 OS=Arabidopsis thaliana GN=PUB20
PE=2 SV=1
Length = 431
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 41/63 (65%)
Query: 266 FYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSI 325
F CPI+ ++M DPV +SG T++R IEKWF G CP+T TVL + PN T+R+ I
Sbjct: 37 FQCPISYELMKDPVIIASGITYDRENIEKWFESGYQTCPVTNTVLTSLEQIPNHTIRRMI 96
Query: 326 EEW 328
+ W
Sbjct: 97 QGW 99
>sp|Q8GZ84|PUB36_ARATH U-box domain-containing protein 36 OS=Arabidopsis thaliana GN=PUB36
PE=2 SV=2
Length = 435
Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%)
Query: 261 EPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKT 320
EP Q F CPIT D+M DP + G T+E AI +WF G+ P+ L + L PN
Sbjct: 352 EPPQYFICPITHDIMEDPHVAADGFTYEGEAISRWFERGHETSPMINKRLPHTSLVPNLA 411
Query: 321 LRQSIEEW 328
LR +I+EW
Sbjct: 412 LRSAIQEW 419
>sp|Q9SGT2|PUB58_ARATH Putative U-box domain-containing protein 58 OS=Arabidopsis thaliana
GN=PUB58 PE=2 SV=3
Length = 420
Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 235 ADAASSPREKEMKYFSKRKSLGSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEK 294
ADA R+K +K + ++ + + +P SF+CPIT++VM DP + G T+E +I K
Sbjct: 330 ADAMREERDKALK--TAKEQMEKR--QPPSSFFCPITQEVMKDPHFAADGFTYEAESIRK 385
Query: 295 WFSDGNNLCPLTMTVLDTSILRPNKTLRQSIEE 327
W S G+ P+T L L PN+ LR +IEE
Sbjct: 386 WLSTGHQTSPMTNLRLSHLTLVPNRALRSAIEE 418
>sp|Q8N9V3|WSDU1_HUMAN WD repeat, SAM and U-box domain-containing protein 1 OS=Homo
sapiens GN=WDSUB1 PE=1 SV=3
Length = 476
Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 49/80 (61%), Gaps = 5/80 (6%)
Query: 250 SKRKSLGSQ-PLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMT 308
+K KSL S P E F CPITR++M DPV S G ++E+ A+E W S P+T
Sbjct: 395 TKVKSLSSGIPDE----FICPITRELMKDPVIASDGYSYEKEAMENWISKKKRTSPMTNL 450
Query: 309 VLDTSILRPNKTLRQSIEEW 328
VL +++L PN+TL+ +I W
Sbjct: 451 VLPSAVLTPNRTLKMAINRW 470
>sp|Q058P4|PUB30_ARATH U-box domain-containing protein 30 OS=Arabidopsis thaliana GN=PUB30
PE=2 SV=1
Length = 448
Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 37/63 (58%)
Query: 266 FYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSI 325
F CPI+ + M DPV +GQT+ER I KWF+ G+ CP TM L + PNKTL I
Sbjct: 68 FICPISLEPMQDPVTLCTGQTYERLNIHKWFNLGHLTCPTTMQELWDDTVTPNKTLHHLI 127
Query: 326 EEW 328
W
Sbjct: 128 YTW 130
>sp|Q5ZMC3|WSDU1_CHICK WD repeat, SAM and U-box domain-containing protein 1 OS=Gallus
gallus GN=WDSUB1 PE=2 SV=2
Length = 476
Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%)
Query: 252 RKSLGSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLD 311
R + S P+ F CPITR++M DPV + G ++E+ A+E W S+ P+T L
Sbjct: 394 RMKMVSVPVAVPDEFLCPITRELMKDPVIAADGYSYEKEAMENWISNNRRSSPMTNLPLP 453
Query: 312 TSILRPNKTLRQSIEEW 328
+ +L PN+TL+ +I W
Sbjct: 454 SLVLTPNRTLKMAISRW 470
>sp|Q9D0I6|WSDU1_MOUSE WD repeat, SAM and U-box domain-containing protein 1 OS=Mus
musculus GN=Wdsub1 PE=2 SV=1
Length = 474
Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 38/63 (60%)
Query: 266 FYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSI 325
F CPITR++M DPV S G ++ER A+E W P+T L + +L PN+TL+ +I
Sbjct: 406 FICPITRELMKDPVIASDGYSYEREAMESWIHKKKRTSPMTNLALPSLVLTPNRTLKMAI 465
Query: 326 EEW 328
W
Sbjct: 466 NRW 468
>sp|Q5FVN8|WSDU1_RAT WD repeat, SAM and U-box domain-containing protein 1 OS=Rattus
norvegicus GN=Wdsub1 PE=2 SV=1
Length = 476
Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 38/63 (60%)
Query: 266 FYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSI 325
F CPITR++M DPV S G ++ER A+E W P+T L + +L PN+TL+ +I
Sbjct: 408 FICPITRELMKDPVIASDGYSYEREAMESWIHKKKRTSPMTNLALPSLVLTPNRTLKMAI 467
Query: 326 EEW 328
W
Sbjct: 468 NRW 470
>sp|Q8S8S7|PUB34_ARATH U-box domain-containing protein 34 OS=Arabidopsis thaliana GN=PUB34
PE=3 SV=1
Length = 801
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 250 SKRKSLGSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTV 309
SK K GS P ++CPI R++M +P + G T+ER AI W + +N+ P+T
Sbjct: 714 SKVKKEGSNLRAP-SHYFCPILREIMEEPEIAADGFTYERKAILAWL-EKHNISPVTRQK 771
Query: 310 LDTSILRPNKTLRQSIEEWKDR 331
LD L PN TLR +I +WK R
Sbjct: 772 LDHFKLTPNHTLRSAIRDWKSR 793
>sp|P0C6E7|PUB55_ARATH Putative U-box domain-containing protein 55 OS=Arabidopsis thaliana
GN=PUB55 PE=3 SV=1
Length = 568
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Query: 249 FSKRKSLGSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMT 308
FS S+ QP P F CPI+++VM +P + G T+E ++ +W +G+ P+T
Sbjct: 487 FSDEDSVTRQP--P-SYFICPISQEVMREPRVAADGFTYEAESLREWLDNGHETSPMTNL 543
Query: 309 VLDTSILRPNKTLRQSIEEWKDRNT 333
L + L PN LR +I+EW RN+
Sbjct: 544 KLAHNNLVPNHALRSAIQEWLQRNS 568
>sp|Q683D5|PUB37_ARATH U-box domain-containing protein 37 OS=Arabidopsis thaliana GN=PUB37
PE=2 SV=1
Length = 400
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 44/84 (52%)
Query: 245 EMKYFSKRKSLGSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCP 304
E++ K S + E Q F CPI+ +VM DP + G T+E AI W G+ P
Sbjct: 308 EVEELRKEVSRSDEHREAPQYFICPISLEVMKDPQLAADGFTYEAEAISTWLQGGHETSP 367
Query: 305 LTMTVLDTSILRPNKTLRQSIEEW 328
+T T L + L PN LR +I+EW
Sbjct: 368 MTNTKLHHTKLVPNLALRSAIQEW 391
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.131 0.364
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 334,167,999
Number of Sequences: 539616
Number of extensions: 13433360
Number of successful extensions: 47391
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 283
Number of HSP's that attempted gapping in prelim test: 46486
Number of HSP's gapped (non-prelim): 935
length of query: 1008
length of database: 191,569,459
effective HSP length: 128
effective length of query: 880
effective length of database: 122,498,611
effective search space: 107798777680
effective search space used: 107798777680
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)