Query 001833
Match_columns 1008
No_of_seqs 508 out of 3688
Neff 9.1
Searched_HMMs 29240
Date Tue Mar 26 15:46:56 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001833.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1131-1134//hhsearch_pdb/001833hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2z6g_A B-catenin; FULL-length, 1.0 1 1 375.2 47.4 554 336-954 116-695 (780)
2 3now_A UNC-45 protein, SD10334 1.0 1 1 367.2 46.2 284 634-963 494-785 (810)
3 2z6h_A Catenin beta-1, beta-ca 1.0 1 1 367.1 48.3 514 374-944 11-550 (644)
4 2z6g_A B-catenin; FULL-length, 1.0 1 1 362.8 45.0 561 377-988 115-690 (780)
5 1jdh_A Beta-catenin; beta-cate 1.0 1 1 359.8 47.8 504 374-958 14-528 (529)
6 2z6h_A Catenin beta-1, beta-ca 1.0 1 1 355.7 40.9 480 337-841 16-526 (644)
7 3now_A UNC-45 protein, SD10334 1.0 1 1 354.4 37.4 482 341-917 253-784 (810)
8 1jdh_A Beta-catenin; beta-cate 1.0 1 1 351.9 40.6 503 419-999 16-529 (529)
9 3ul1_B Importin subunit alpha- 1.0 1 1 349.0 40.8 415 460-964 56-482 (510)
10 3tpo_A Importin subunit alpha- 1.0 1 1 343.4 41.4 415 460-964 75-501 (529)
No 1
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=1.00 E-value=1 Score=375.19 Aligned_cols=554 Identities=18% Similarity=0.179 Sum_probs=452.3
Q ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf 24311120048533779999999999982112344667515956899998738998889999999998316993459985
Q 001833 336 TIASMKPKLVSTEVEEVLHCLEQLQDLCQQRDQHREWVILENYIPKLIYLLGSKNRDVRNRALIILHILVKDSNDTKERL 415 (1008)
Q Consensus 336 ~i~~~~~~l~~~~~~~~~~al~~L~~l~~~~~~~r~~i~~~g~i~~L~~lL~s~~~~~~~~Al~~L~~Ls~~~~~~k~~i 415 (1008)
.++.+...|.+++++.+..+++.++.. ++..+. .|++|.|+.+|.+++..+|..|+.+|.+++.+. .++..+
T Consensus 116 ~i~~lv~~L~~~~~~~r~~a~~~l~~~------~~~~i~-~g~ip~Lv~lL~~~d~~vr~~A~~~L~~L~~~~-~~~~~i 187 (780)
T 2z6g_A 116 AHPTNVQRLAEPSQMLKHAVVNLINYQ------DDAELA-TRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKE-ASRHAI 187 (780)
T ss_dssp ----------CCSCHHHHHHHHHHHHH------HHHHHH-HHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTSH-HHHHHH
T ss_pred CHHHHHHHHCCCCHHHHHHHHHHHHHH------HHHHHH-HCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC-HHHHHH
T ss_conf 089999982386599999999999861------377777-387999999877999999999999999996798-418998
Q ss_pred HCCCCCHHHHHHHHCC--CHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC-C
Q ss_conf 3157838999999316--926999999999974027003688420004699999985399948899999999851389-5
Q 001833 416 ANGDDAVESIVRSLGR--RIEERKLAVALLLELSTCNTLRDQIGDVQGCILLLVTMASSDDNQASRDAQELLENLSFS-D 492 (1008)
Q Consensus 416 ~~~~g~i~~lv~~L~~--~~~~~~~A~~~L~~Ls~~~~~~~~i~~~~g~i~~Lv~lL~~~~~~~~~~a~~aL~~Ls~~-~ 492 (1008)
....|+++.|++.|.+ +.+.++.|+..|++|+..++++..+.+ .|+|+.|+.+++++++.++..|+.+|.|++.. +
T Consensus 188 ~~~~~~i~~Lv~~L~~~~d~~vr~~Aa~aL~~Ls~~~~~~~~i~~-~g~I~~Lv~lL~~~~~~v~~~A~~aL~nLa~~~~ 266 (780)
T 2z6g_A 188 MRSPQMVSAIVRTMQNTNDVETARCTSGTLHNLSHHREGLLAIFK-SGGIPALVNMLGSPVDSVLFHAITTLHNLLLHQE 266 (780)
T ss_dssp TTCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTSHHHHHHHHH-TTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHST
T ss_pred HHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH-CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCH
T ss_conf 755083999999975799999999999999999679636899987-5889999999759988999999999999967983
Q ss_pred CCHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCC-CHHHHHHHHHCCCHHHHHHHHCCCCH-HHHHHHHHHHHHH
Q ss_conf 009999852847999999815997899999999999717-94469987506847989987226998-7899999999995
Q 001833 493 DNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEMEL-TDHHKASLLEGNVLGPLLHLVSRGDI-QMKKVAVKALRNL 570 (1008)
Q Consensus 493 ~n~~~i~~~g~i~~Li~~L~~~~~~~~~~aa~~L~~Ls~-~~~~k~~i~~~g~i~~Lv~lL~~~~~-~~~~~A~~aL~~L 570 (1008)
.++..+.+.|+++.|+.++..++..++..++.+|..++. +++++..+.+.|+++.|+.+++++++ ..++.++.+|.+|
T Consensus 267 ~~~~~v~~~g~v~~Lv~lL~~~~~~v~~~a~~aL~~La~~~~e~~~~i~~~~~i~~Lv~lL~~~~~~~~~~~a~~aL~~L 346 (780)
T 2z6g_A 267 GAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVL 346 (780)
T ss_dssp THHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHTTTHHHHHHHHHTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf 54999997698889999980287889999999999984479288999997598899999984688899999999999984
Q ss_pred HCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHH
Q ss_conf 08992058998609759999996014899910699999999997405355346886545345234899999852258947
Q 001833 571 SSVPQNGLQMIKEGAVGPLVDLLLHHSSSSSSLREETATAIMHLAVSTMYQESSQTPVTLLESDKEIFMLFSLINLTGPN 650 (1008)
Q Consensus 571 ~~~~~~~~~~~~~g~i~~Lv~ll~~~~~~~~~~~~~a~~~L~nLa~~~~~~~~~~~~~~~l~~~~~i~~L~~ll~~~~~~ 650 (1008)
+..+.++..+++.|+++.|+.++.+.+ ..++..++++|.+++...... ....++++.|+.++.+.++.
T Consensus 347 s~~~~~~~~i~~~g~l~~Ll~lL~~~~---~~~~~~a~~~L~~L~~~~~~~---------~~~~~~i~~Lv~lL~~~d~~ 414 (780)
T 2z6g_A 347 SVCSSNKPAIVEAGGMQALGLHLTDPS---QRLVQNCLWTLRNLSDAATKQ---------EGMEGLLGTLVQLLGSDDIN 414 (780)
T ss_dssp HTSTTHHHHHHHTTHHHHHGGGTTCSC---HHHHHHHHHHHHHHHTTCTTC---------SCCHHHHHHHHHHTTCSCHH
T ss_pred HCCHHHHHHHHHHCHHHHHHHHHCCCC---HHHHHHHHHHHHHHHCCCHHH---------HHHHHHHHHHHHHHCCCCHH
T ss_conf 317378999998065999999871776---499999999999985234434---------45644999999997499989
Q ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHCCC-C-HHHHHHHHHHHHHHCCCCCHH--HHHHHHCCCCHHH
Q ss_conf 89999999999505999025999964169768999851167-7-458999999999834489804--7886316342579
Q 001833 651 VQQRILQTFNALCRSPSAGNIKTTLTQCSAIPVLVQLCEHD-N-ENVRANAVKLFCCLVDDGDEA--IIREHVGQKCLET 726 (1008)
Q Consensus 651 v~~~al~aL~~L~~~~~~~~~~~~i~e~~~i~~Li~ll~~~-~-~~i~~~a~~~L~~Ls~~~~~~--~~~~~~~~~~i~~ 726 (1008)
++..++++|.+|+.. +...+..+.+.++++.|+.++.+. + ++++..++++|.+|+...... ....+...++++.
T Consensus 415 vr~~A~~aL~~L~~~--~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~v~~~Al~aL~nL~~~~~~~~~~~~~v~~~~~l~~ 492 (780)
T 2z6g_A 415 VVTCAAGILSNLTCN--NYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQDAEMAQNAVRLHYGLPV 492 (780)
T ss_dssp HHHHHHHHHHHHTSS--CHHHHHHHHTTTHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSSTTHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHC--CHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHH
T ss_conf 999999999999858--888899999878999999999713987899999999999987458527999999997588899
Q ss_pred HHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHCCC----------------CCCCCHHHHHHHH
Q ss_conf 998722899999999999998439999565899996398799999840799----------------8998235699999
Q 001833 727 LVTIIQSSHNEEEIASAMGILSKLPEVPQFTQWLLDAGALPIVLNFLKNGR----------------QNDPNRFQVVENA 790 (1008)
Q Consensus 727 Lv~lL~~~~~~~v~~~a~~~L~nL~~~~~~~~~l~~~g~i~~L~~lL~~~~----------------~~~~~~~~i~~~a 790 (1008)
|+.+|.+.+...++..++++|+||+..+.....+.+.|+++.|+.+|.++. ........+++.+
T Consensus 493 L~~lL~~~~~~~v~~~A~~aL~nLa~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~aa~al~nq~~~~~~~~~~v~~~a 572 (780)
T 2z6g_A 493 VVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEAC 572 (780)
T ss_dssp HHHTTSTTCCHHHHHHHHHHHHHHHSSHHHHHHHHHTTHHHHHHHHHHHHHHHHHHTTC------CCSTTCCHHHHHHHH
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHCCCCCHHHCCCCHHHHHHHH
T ss_conf 99985688767899999999999853988799999788899999998720156777875224541123046769999999
Q ss_pred HHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99997714889988999999819967999996409958999999998643104799888899998631148999876544
Q 001833 791 VGALRRFTAPTNLEWQKRAAEAGVIPKLVQLLEYGTTLTKEHAATSLARFSKNSLGLSRPIPKRKGFWCFSPPPEIGCQV 870 (1008)
Q Consensus 791 ~~aL~~L~~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~Aa~aL~nls~~s~~l~~~~~~~~g~~~~~~~~~~~c~~ 870 (1008)
+.+|++++. ++..+..+.+.|+++.|+.+|.++++.++..|+.+|++++.
T Consensus 573 ~~aL~~La~--~~~~~~~l~~~~~i~~Lv~lL~~~~~~v~~~a~~aL~~L~~---------------------------- 622 (780)
T 2z6g_A 573 TGALHILAR--DIHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQ---------------------------- 622 (780)
T ss_dssp HHHHHHHTT--SHHHHHHHHHTCCHHHHHHGGGCSCHHHHHHHHHHHHHHHT----------------------------
T ss_pred HHHHHHHHC--CHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHC----------------------------
T ss_conf 999999835--84669999877868999999769988999999999999955----------------------------
Q ss_pred CCCCCCCCCCHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHH-CCCCCCHHHHHHHHCCCHHHHHHHHCCCCHHHHH
Q ss_conf 685347443036743456078987205898136599999997532-0444421468978508369999982599957899
Q 001833 871 HGGLCGIESSFCLLEANAVRPLVRVLEDPDHGACEASLDALVTLI-EGERLQNGSKVLEDANAIDRMVRFLSSPSPKLQE 949 (1008)
Q Consensus 871 h~~~c~~~~~~~l~~~g~i~~Lv~lL~~~d~~v~~~al~aL~~L~-~~~~~~~~~~~i~~~~~i~~L~~ll~~~~~~v~~ 949 (1008)
..+....+.+.|++++|+.++.+.|..++..|+++|.++. +.. ...... .+++.+..++.+.+ ..|.
T Consensus 623 -----~~~~~~~i~~~g~i~~L~~Ll~~~~~~Vr~~A~~aL~~l~~~~~--~~~~~~----l~~~ll~~l~~~~~-~~w~ 690 (780)
T 2z6g_A 623 -----DKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRMSEDKP--QDYKKR----LSVELTSSLFRTEP-MTWN 690 (780)
T ss_dssp -----SHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHHTTSC--TTHHHH----HHHHHHHHC----------
T ss_pred -----CHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCH--HHHHCC----CCHHHHHHHHHCCC-CCCC
T ss_conf -----98888999977879999998758998999999999999971881--755404----52789999980788-6646
Q ss_pred HHHHH
Q ss_conf 99999
Q 001833 950 KALDS 954 (1008)
Q Consensus 950 ~a~~~ 954 (1008)
.+..+
T Consensus 691 ~~~~~ 695 (780)
T 2z6g_A 691 ETGDL 695 (780)
T ss_dssp -----
T ss_pred CCCCC
T ss_conf 57654
No 2
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=1.00 E-value=1 Score=367.18 Aligned_cols=284 Identities=15% Similarity=0.173 Sum_probs=142.5
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHH
Q ss_conf 34899999852258947899999999995059990259999641697689998511677458999999999834489804
Q 001833 634 DKEIFMLFSLINLTGPNVQQRILQTFNALCRSPSAGNIKTTLTQCSAIPVLVQLCEHDNENVRANAVKLFCCLVDDGDEA 713 (1008)
Q Consensus 634 ~~~i~~L~~ll~~~~~~v~~~al~aL~~L~~~~~~~~~~~~i~e~~~i~~Li~ll~~~~~~i~~~a~~~L~~Ls~~~~~~ 713 (1008)
.|+++.|+.++.+.++.+++.++|+|.+++.+ .+.+..+.+.|+++.|+.++.++++..+..|+++|.+++...++.
T Consensus 494 aGaVp~LV~LL~s~s~~vqe~Aa~aL~NLA~d---~~~r~~Vv~~Gaip~Lv~LL~s~~~~~k~~Aa~AL~nL~~~~~p~ 570 (810)
T 3now_A 494 EGITTALCALAKTESHNSQELIARVLNAVCGL---KELRGKVVQEGGVKALLRMALEGTEKGKRHATQALARIGITINPE 570 (810)
T ss_dssp TTHHHHHHHHHTCCCHHHHHHHHHHHHHHHTS---HHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCHH
T ss_pred CCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCC---HHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHH
T ss_conf 85999999998599989999999999998589---889999998789999999970598889999999999996589856
Q ss_pred HHHH-HHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCC-CHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHH
Q ss_conf 7886-31634257999872289999999999999843999-956589999639879999984079989982356999999
Q 001833 714 IIRE-HVGQKCLETLVTIIQSSHNEEEIASAMGILSKLPE-VPQFTQWLLDAGALPIVLNFLKNGRQNDPNRFQVVENAV 791 (1008)
Q Consensus 714 ~~~~-~~~~~~i~~Lv~lL~~~~~~~v~~~a~~~L~nL~~-~~~~~~~l~~~g~i~~L~~lL~~~~~~~~~~~~i~~~a~ 791 (1008)
..-. ....++++.|+++|.++.+...+..|+.+|+||+. ++..+..+++.|+++.|+.++.+ .+..+++.|+
T Consensus 571 ~~~~~~~~~~aIppLv~LL~~~~~~l~~~eAl~AL~NLa~~~d~~~~~Ii~aG~l~~Lv~LL~s------~~~~Vq~~A~ 644 (810)
T 3now_A 571 VSFSGQRSLDVIRPLLNLLQQDCTALENFESLMALTNLASMNESVRQRIIKEQGVSKIEYYLME------DHLYLTRAAA 644 (810)
T ss_dssp HHTTTHHHHHTHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHHS------CCTTHHHHHH
T ss_pred HHHCCHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCC------CCHHHHHHHH
T ss_conf 6531002315799999986789827889999999999846998999999986888999999828------9999999999
Q ss_pred HHHHHHCCCCCHHHHHHHHH-CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99977148899889999998-19967999996409958999999998643104799888899998631148999876544
Q 001833 792 GALRRFTAPTNLEWQKRAAE-AGVIPKLVQLLEYGTTLTKEHAATSLARFSKNSLGLSRPIPKRKGFWCFSPPPEIGCQV 870 (1008)
Q Consensus 792 ~aL~~L~~~~~~~~~~~i~~-~g~i~~Lv~lL~~~~~~v~~~Aa~aL~nls~~s~~l~~~~~~~~g~~~~~~~~~~~c~~ 870 (1008)
++|+|++. +++.+..+.+ .|.++.|+.++.+++..+|+.|+|+|+|++..
T Consensus 645 ~~L~NLa~--~~~~~~~~v~~~g~l~~Lv~LL~s~d~~vq~~Aa~ALanLt~~--------------------------- 695 (810)
T 3now_A 645 QCLCNLVM--SEDVIKMFEGNNDRVKFLALLCEDEDEETATACAGALAIITSV--------------------------- 695 (810)
T ss_dssp HHHHHHTT--SHHHHHHHHSSSSHHHHHHHGGGCSSHHHHHHHHHHHHHHHHH---------------------------
T ss_pred HHHHHHHC--CHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCC---------------------------
T ss_conf 99999967--9599999986168089999984699989999999999998679---------------------------
Q ss_pred CCCCCCCCCCHHHHH-CCCHHHHHHHHCCCCHHHHHHHHHHHHHHH-CCCCCCHHHHHHHHCCCHHHHHHHHCCC---CH
Q ss_conf 685347443036743-456078987205898136599999997532-0444421468978508369999982599---95
Q 001833 871 HGGLCGIESSFCLLE-ANAVRPLVRVLEDPDHGACEASLDALVTLI-EGERLQNGSKVLEDANAIDRMVRFLSSP---SP 945 (1008)
Q Consensus 871 h~~~c~~~~~~~l~~-~g~i~~Lv~lL~~~d~~v~~~al~aL~~L~-~~~~~~~~~~~i~~~~~i~~L~~ll~~~---~~ 945 (1008)
+.++...+++ .|++++|+++|.++|..++..|+++|.|+. .+ ......+.+.|++++|++++..+ +.
T Consensus 696 -----s~~~~~~ii~~~g~I~~Lv~LL~s~d~~vq~~A~~aL~NL~~~s---~e~~~~l~e~G~i~~L~~LL~~~d~~~~ 767 (810)
T 3now_A 696 -----SVKCCEKILAIASWLDILHTLIANPSPAVQHRGIVIILNMINAG---EEIAKKLFETDIMELLSGLGQLPDDTRA 767 (810)
T ss_dssp -----CHHHHHHHHTSTTHHHHHHHHHTCSSHHHHHHHHHHHHHHHTTC---HHHHHHHHTSTHHHHHTTSCCCTTSTTH
T ss_pred -----CHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC---HHHHHHHHHCCCHHHHHHHHHCCCCCCH
T ss_conf -----98999999987488989999877998899999999999998699---9999999989788999999827665767
Q ss_pred HHHHHHHHHHHHHHCCHH
Q ss_conf 789999999999853847
Q 001833 946 KLQEKALDSVERIFRLPE 963 (1008)
Q Consensus 946 ~v~~~a~~~L~~l~~~~~ 963 (1008)
++.+.|..+|+++...+.
T Consensus 768 ~i~e~Al~aL~~ll~~g~ 785 (810)
T 3now_A 768 KAREVATQCLAAAERYRI 785 (810)
T ss_dssp HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHCCC
T ss_conf 999999999999986798
No 3
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=1.00 E-value=1 Score=367.07 Aligned_cols=514 Identities=18% Similarity=0.200 Sum_probs=431.5
Q ss_pred HHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHCC--CHHHHHHHHHHHHHHCCCCH
Q ss_conf 5159568999987389988899999999983169934599853157838999999316--92699999999997402700
Q 001833 374 ILENYIPKLIYLLGSKNRDVRNRALIILHILVKDSNDTKERLANGDDAVESIVRSLGR--RIEERKLAVALLLELSTCNT 451 (1008)
Q Consensus 374 ~~~g~i~~L~~lL~s~~~~~~~~Al~~L~~Ls~~~~~~k~~i~~~~g~i~~lv~~L~~--~~~~~~~A~~~L~~Ls~~~~ 451 (1008)
...|++|.|+.+|++++..+|..|+.+|.+++.++ .++..+....|+++.+++.|.+ +.+.+..|+..|.+|+..++
T Consensus 11 ~~~g~i~~Lv~lL~~~~~~vr~~A~~~L~~La~~~-~~~~~i~~~~~~i~~Lv~~L~~~~~~~~~~~A~~~L~~Ls~~~~ 89 (644)
T 2z6h_A 11 LATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKE-ASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHRE 89 (644)
T ss_dssp -CTTTHHHHHHHHTCSCHHHHHHHHHHHHHHHTST-THHHHHTTCHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHTTSHH
T ss_pred HHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC-HHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHH
T ss_conf 65530999999873999999999999999997787-53999986507699999998648999999999999999846916
Q ss_pred HHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC-CCCHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHC
Q ss_conf 3688420004699999985399948899999999851389-500999985284799999981599789999999999971
Q 001833 452 LRDQIGDVQGCILLLVTMASSDDNQASRDAQELLENLSFS-DDNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEME 530 (1008)
Q Consensus 452 ~~~~i~~~~g~i~~Lv~lL~~~~~~~~~~a~~aL~~Ls~~-~~n~~~i~~~g~i~~Li~~L~~~~~~~~~~aa~~L~~Ls 530 (1008)
++..+.+ .|+++.|+.+++++++.++..|+.+|.+++.. +.++..+.+.|+++.|+.+|.+++...+..++.+|.+++
T Consensus 90 ~~~~i~~-~g~i~~Lv~lL~~~~~~v~~~A~~aL~nL~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~~~~~a~~~L~~La 168 (644)
T 2z6h_A 90 GLLAIFK-SGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILA 168 (644)
T ss_dssp HHHHHHT-TTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSTTHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf 5899998-598999999980898999999999999997376103899997799489999877597899999999999998
Q ss_pred C-CHHHHHHHHHCCCHHHHHHHHCCCC-HHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHH
Q ss_conf 7-9446998750684798998722699-8789999999999508992058998609759999996014899910699999
Q 001833 531 L-TDHHKASLLEGNVLGPLLHLVSRGD-IQMKKVAVKALRNLSSVPQNGLQMIKEGAVGPLVDLLLHHSSSSSSLREETA 608 (1008)
Q Consensus 531 ~-~~~~k~~i~~~g~i~~Lv~lL~~~~-~~~~~~A~~aL~~L~~~~~~~~~~~~~g~i~~Lv~ll~~~~~~~~~~~~~a~ 608 (1008)
. +++++..+.+.|+++.|++++++.+ ...+..++.+|.+|+.+++++..+++.|+++.|+.++.+.+ ..++..++
T Consensus 169 ~~~~~~~~~i~~~g~v~~Lv~lL~~~~~~~~~~~a~~~L~nLs~~~~~~~~l~~~g~l~~L~~ll~~~~---~~~~~~a~ 245 (644)
T 2z6h_A 169 YGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPS---QRLVQNCL 245 (644)
T ss_dssp TTCHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTCTTHHHHHHHTTHHHHHHTTTTCSC---HHHHHHHH
T ss_pred HCCCHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHCCC---HHHHHHHH
T ss_conf 269589999998698499999997288288999999999998069501899998787999999982698---89999999
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHH
Q ss_conf 99999740535534688654534523489999985225894789999999999505999025999964169768999851
Q 001833 609 TAIMHLAVSTMYQESSQTPVTLLESDKEIFMLFSLINLTGPNVQQRILQTFNALCRSPSAGNIKTTLTQCSAIPVLVQLC 688 (1008)
Q Consensus 609 ~~L~nLa~~~~~~~~~~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~al~aL~~L~~~~~~~~~~~~i~e~~~i~~Li~ll 688 (1008)
++|.|++...... ....++++.|+.++.+.++.++..++++|.+|+.. +...+..+.+.++++.|+.++
T Consensus 246 ~~L~nL~~~~~~~---------~~~~~~i~~Lv~lL~~~d~~v~~~a~~aL~~L~~~--~~~~~~~v~~~g~v~~Lv~lL 314 (644)
T 2z6h_A 246 WTLRNLSDAATKQ---------EGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCN--NYKNKMMVCQVGGIEALVRTV 314 (644)
T ss_dssp HHHHHHGGGCTTC---------CSCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTT--CHHHHHHHHHTTHHHHHHHHH
T ss_pred HHHHHHHHCCHHH---------HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC--CHHHHHHHHHCCCHHHHHHHH
T ss_conf 9999986255143---------43635999999997389889999999999998719--989999999758879999999
Q ss_pred CCCC--HHHHHHHHHHHHHHCCCCC-HHH-HHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCC
Q ss_conf 1677--4589999999998344898-047-88631634257999872289999999999999843999956589999639
Q 001833 689 EHDN--ENVRANAVKLFCCLVDDGD-EAI-IREHVGQKCLETLVTIIQSSHNEEEIASAMGILSKLPEVPQFTQWLLDAG 764 (1008)
Q Consensus 689 ~~~~--~~i~~~a~~~L~~Ls~~~~-~~~-~~~~~~~~~i~~Lv~lL~~~~~~~v~~~a~~~L~nL~~~~~~~~~l~~~g 764 (1008)
.+.+ ++++..++++|.+++.... ... ...+...++++.|+++|.+.++..++..++++|+||+..+.....+.+.|
T Consensus 315 ~~~~~~~~v~~~a~~aL~nL~~~~~~~~~~q~~v~~~~~l~~L~~lL~~~~~~~v~~~a~~~L~nLa~~~~~~~~i~~~~ 394 (644)
T 2z6h_A 315 LRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQG 394 (644)
T ss_dssp HHHTTCHHHHHHHHHHHHHHTSSSTTHHHHHHHHHHTTHHHHHHHTTSTTCCHHHHHHHHHHHHHHTTSGGGHHHHHHTT
T ss_pred HCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCC
T ss_conf 80498579999999999998558944799999999746918999985766745799999999999736987779999768
Q ss_pred CHHHHHHHHHCCC----------------CCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHCCCHH
Q ss_conf 8799999840799----------------899823569999999997714889988999999819967999996409958
Q 001833 765 ALPIVLNFLKNGR----------------QNDPNRFQVVENAVGALRRFTAPTNLEWQKRAAEAGVIPKLVQLLEYGTTL 828 (1008)
Q Consensus 765 ~i~~L~~lL~~~~----------------~~~~~~~~i~~~a~~aL~~L~~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~ 828 (1008)
+++.|+.++.++. ........+++.++.+|.+++. ++..+..+.+.|+++.|+.+|.++++.
T Consensus 395 ~i~~Lv~lL~~~~~~vr~~a~~al~n~~~~~~~~~~~v~~~a~~aL~~La~--~~~~~~~l~~~~~i~~Lv~lL~~~~~~ 472 (644)
T 2z6h_A 395 AIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILAR--DVHNRIVIRGLNTIPLFVQLLYSPIEN 472 (644)
T ss_dssp HHHHHHHHHHHHHHHHTTC----------CCSSCHHHHHHHHHHHHHHHTT--SHHHHHHHHHTTCHHHHHHHTTCSCHH
T ss_pred CHHHHHHHHHCCCHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHHHHC--CHHHHHHHHHCCCHHHHHHHHCCCCHH
T ss_conf 799999998500324666752045530111356599999999999999961--999999987478679999997189778
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHCCCCHHHHHHHH
Q ss_conf 99999999864310479988889999863114899987654468534744303674345607898720589813659999
Q 001833 829 TKEHAATSLARFSKNSLGLSRPIPKRKGFWCFSPPPEIGCQVHGGLCGIESSFCLLEANAVRPLVRVLEDPDHGACEASL 908 (1008)
Q Consensus 829 v~~~Aa~aL~nls~~s~~l~~~~~~~~g~~~~~~~~~~~c~~h~~~c~~~~~~~l~~~g~i~~Lv~lL~~~d~~v~~~al 908 (1008)
++..|+++|.+++.. .+....+.+.|++++|+.++.+.|+.++..|.
T Consensus 473 v~~~a~~aL~~l~~~---------------------------------~~~~~~i~~~g~l~~L~~ll~~~~~~vr~~A~ 519 (644)
T 2z6h_A 473 IQRVAAGVLCELAQD---------------------------------KEAAEAIEAEGATAPLTELLHSRNEGVATYAA 519 (644)
T ss_dssp HHHHHHHHHHHHHTS---------------------------------HHHHHHHHHTTCHHHHHHHTTCSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHCC---------------------------------HHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHH
T ss_conf 999999999999729---------------------------------87789999759866899987699889999999
Q ss_pred HHHHHHH-CCCCCCHHHHHHHHCCCHHHHHHHHCCCC
Q ss_conf 9997532-04444214689785083699999825999
Q 001833 909 DALVTLI-EGERLQNGSKVLEDANAIDRMVRFLSSPS 944 (1008)
Q Consensus 909 ~aL~~L~-~~~~~~~~~~~i~~~~~i~~L~~ll~~~~ 944 (1008)
.+|.++. +.. ..+... . +++.+..++.+.+
T Consensus 520 ~aL~~l~~~~~--~~~~~~---~-~~~il~~~~~~~~ 550 (644)
T 2z6h_A 520 AVLFRMSEDKP--QDYKKR---L-SVELTSSLFRTEP 550 (644)
T ss_dssp HHHHHHTTTSC--HHHHHH---H-HHHHHHHHSCCSC
T ss_pred HHHHHHHCCCC--HHHHCC---C-CHHHHHHHHHCCC
T ss_conf 99999864683--865304---4-5699999981798
No 4
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=1.00 E-value=1 Score=362.84 Aligned_cols=561 Identities=17% Similarity=0.188 Sum_probs=453.1
Q ss_pred CCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHCC-CHHHHHHHHHHHHHHCCCCHHHHH
Q ss_conf 9568999987389988899999999983169934599853157838999999316-926999999999974027003688
Q 001833 377 NYIPKLIYLLGSKNRDVRNRALIILHILVKDSNDTKERLANGDDAVESIVRSLGR-RIEERKLAVALLLELSTCNTLRDQ 455 (1008)
Q Consensus 377 g~i~~L~~lL~s~~~~~~~~Al~~L~~Ls~~~~~~k~~i~~~~g~i~~lv~~L~~-~~~~~~~A~~~L~~Ls~~~~~~~~ 455 (1008)
..++.++..|.+++.+++..++..++.. ++..+. .|+++.|+.+|.+ +...++.|+.+|.+++..+..+..
T Consensus 115 ~~i~~lv~~L~~~~~~~r~~a~~~l~~~------~~~~i~--~g~ip~Lv~lL~~~d~~vr~~A~~~L~~L~~~~~~~~~ 186 (780)
T 2z6g_A 115 SAHPTNVQRLAEPSQMLKHAVVNLINYQ------DDAELA--TRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHA 186 (780)
T ss_dssp -----------CCSCHHHHHHHHHHHHH------HHHHHH--HHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTSHHHHHH
T ss_pred CCHHHHHHHHCCCCHHHHHHHHHHHHHH------HHHHHH--HCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHH
T ss_conf 3089999982386599999999999861------377777--38799999987799999999999999999679841899
Q ss_pred HHCCCCHHHHHHHHHCC-CCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCC-H
Q ss_conf 42000469999998539-994889999999985138950099998528479999998159978999999999997179-4
Q 001833 456 IGDVQGCILLLVTMASS-DDNQASRDAQELLENLSFSDDNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEMELT-D 533 (1008)
Q Consensus 456 i~~~~g~i~~Lv~lL~~-~~~~~~~~a~~aL~~Ls~~~~n~~~i~~~g~i~~Li~~L~~~~~~~~~~aa~~L~~Ls~~-~ 533 (1008)
+....|+++.|+.+|++ .++.++..|+.+|.+|+..++++..+.+.|+++.|+.+|++++..++..++++|.+++.. +
T Consensus 187 i~~~~~~i~~Lv~~L~~~~d~~vr~~Aa~aL~~Ls~~~~~~~~i~~~g~I~~Lv~lL~~~~~~v~~~A~~aL~nLa~~~~ 266 (780)
T 2z6g_A 187 IMRSPQMVSAIVRTMQNTNDVETARCTSGTLHNLSHHREGLLAIFKSGGIPALVNMLGSPVDSVLFHAITTLHNLLLHQE 266 (780)
T ss_dssp HTTCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHST
T ss_pred HHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCH
T ss_conf 87550839999999757999999999999999996796368999875889999999759988999999999999967983
Q ss_pred HHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHC-CCCHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf 469987506847989987226998789999999999508-9920589986097599999960148999106999999999
Q 001833 534 HHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSS-VPQNGLQMIKEGAVGPLVDLLLHHSSSSSSLREETATAIM 612 (1008)
Q Consensus 534 ~~k~~i~~~g~i~~Lv~lL~~~~~~~~~~A~~aL~~L~~-~~~~~~~~~~~g~i~~Lv~ll~~~~~~~~~~~~~a~~~L~ 612 (1008)
..+..+.+.|+++.|++++.+++..++..++.+|.+++. +++++..+++.|+++.|+.++.+.+. ...++.++.+|.
T Consensus 267 ~~~~~v~~~g~v~~Lv~lL~~~~~~v~~~a~~aL~~La~~~~e~~~~i~~~~~i~~Lv~lL~~~~~--~~~~~~a~~aL~ 344 (780)
T 2z6g_A 267 GAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTY--EKLLWTTSRVLK 344 (780)
T ss_dssp THHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHTTTHHHHHHHHHTTCCC--HHHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCH--HHHHHHHHHHHH
T ss_conf 549999976988899999802878899999999999844792889999975988999999846888--999999999999
Q ss_pred HHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHCCCC
Q ss_conf 97405355346886545345234899999852258947899999999995059990259999641697689998511677
Q 001833 613 HLAVSTMYQESSQTPVTLLESDKEIFMLFSLINLTGPNVQQRILQTFNALCRSPSAGNIKTTLTQCSAIPVLVQLCEHDN 692 (1008)
Q Consensus 613 nLa~~~~~~~~~~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~al~aL~~L~~~~~~~~~~~~i~e~~~i~~Li~ll~~~~ 692 (1008)
+++.+...+. .+...++++.|+.++.+.++.++..++++|.+++....... ...++++.|+.++.+.+
T Consensus 345 ~Ls~~~~~~~-------~i~~~g~l~~Ll~lL~~~~~~~~~~a~~~L~~L~~~~~~~~-----~~~~~i~~Lv~lL~~~d 412 (780)
T 2z6g_A 345 VLSVCSSNKP-------AIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQE-----GMEGLLGTLVQLLGSDD 412 (780)
T ss_dssp HHHTSTTHHH-------HHHHTTHHHHHGGGTTCSCHHHHHHHHHHHHHHHTTCTTCS-----CCHHHHHHHHHHTTCSC
T ss_pred HHHCCHHHHH-------HHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHH-----HHHHHHHHHHHHHCCCC
T ss_conf 8431737899-------99980659999998717764999999999999852344344-----56449999999974999
Q ss_pred HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHCCC-CCHHHHHHHHHHHHCCCC-CHH---HHHHHHHCCCHH
Q ss_conf 458999999999834489804788631634257999872289-999999999999843999-956---589999639879
Q 001833 693 ENVRANAVKLFCCLVDDGDEAIIREHVGQKCLETLVTIIQSS-HNEEEIASAMGILSKLPE-VPQ---FTQWLLDAGALP 767 (1008)
Q Consensus 693 ~~i~~~a~~~L~~Ls~~~~~~~~~~~~~~~~i~~Lv~lL~~~-~~~~v~~~a~~~L~nL~~-~~~---~~~~l~~~g~i~ 767 (1008)
.+++..++++|.+|+ .+.+.....+.+.++++.|++++.+. +..+++..++++|+||+. +.+ .+..+...++++
T Consensus 413 ~~vr~~A~~aL~~L~-~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~v~~~Al~aL~nL~~~~~~~~~~~~~v~~~~~l~ 491 (780)
T 2z6g_A 413 INVVTCAAGILSNLT-CNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQDAEMAQNAVRLHYGLP 491 (780)
T ss_dssp HHHHHHHHHHHHHHT-SSCHHHHHHHHTTTHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSSTTHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHH-HCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHH
T ss_conf 899999999999998-5888889999987899999999971398789999999999998745852799999999758889
Q ss_pred HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHH--HHHCCC
Q ss_conf 999984079989982356999999999771488998899999981996799999640995899999999864--310479
Q 001833 768 IVLNFLKNGRQNDPNRFQVVENAVGALRRFTAPTNLEWQKRAAEAGVIPKLVQLLEYGTTLTKEHAATSLAR--FSKNSL 845 (1008)
Q Consensus 768 ~L~~lL~~~~~~~~~~~~i~~~a~~aL~~L~~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~Aa~aL~n--ls~~s~ 845 (1008)
.|+.+|.++ ....+++.++++|+|++. .+..+..+.+.|+++.|+.+|.+++.++++.++|++.| +.....
T Consensus 492 ~L~~lL~~~-----~~~~v~~~A~~aL~nLa~--~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~aa~al~nq~~~~~~~ 564 (780)
T 2z6g_A 492 VVVKLLHPP-----SHWPLIKATVGLIRNLAL--CPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVR 564 (780)
T ss_dssp HHHHTTSTT-----CCHHHHHHHHHHHHHHHS--SHHHHHHHHHTTHHHHHHHHHHHHHHHHHHTTC------CCSTTCC
T ss_pred HHHHHHCCC-----CHHHHHHHHHHHHHHHHC--CHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHCCCCCHHHCCCC
T ss_conf 999985688-----767899999999999853--9887999997888999999987201567778752245411230467
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHH-CCCCCCHH
Q ss_conf 98888999986311489998765-44685347443036743456078987205898136599999997532-04444214
Q 001833 846 GLSRPIPKRKGFWCFSPPPEIGC-QVHGGLCGIESSFCLLEANAVRPLVRVLEDPDHGACEASLDALVTLI-EGERLQNG 923 (1008)
Q Consensus 846 ~l~~~~~~~~g~~~~~~~~~~~c-~~h~~~c~~~~~~~l~~~g~i~~Lv~lL~~~d~~v~~~al~aL~~L~-~~~~~~~~ 923 (1008)
... .....+ ..+....++++...+.+.|++++|+.+|.+.++.++..++.+|.++. +. ..
T Consensus 565 --------~~~------v~~~a~~aL~~La~~~~~~~~l~~~~~i~~Lv~lL~~~~~~v~~~a~~aL~~L~~~~----~~ 626 (780)
T 2z6g_A 565 --------MEE------IVEACTGALHILARDIHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDK----EA 626 (780)
T ss_dssp --------HHH------HHHHHHHHHHHHTTSHHHHHHHHHTCCHHHHHHGGGCSCHHHHHHHHHHHHHHHTSH----HH
T ss_pred --------HHH------HHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCH----HH
T ss_conf --------699------999999999998358466999987786899999976998899999999999995598----88
Q ss_pred HHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHH--HHHHHCCCCCCHHHHHCCCCCCHHH
Q ss_conf 6897850836999998259995789999999999853847--7888414467113442124895036
Q 001833 924 SKVLEDANAIDRMVRFLSSPSPKLQEKALDSVERIFRLPE--FKQKYGKSAQMPLVDLTQRGNSSMK 988 (1008)
Q Consensus 924 ~~~i~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~--~~~~~~~~~~~~Lv~l~~~~~~~~~ 988 (1008)
...|.+.|+++.|.+++.++++.+++.|.++|.++..... ++... +...+..++.+.+..+.
T Consensus 627 ~~~i~~~g~i~~L~~Ll~~~~~~Vr~~A~~aL~~l~~~~~~~~~~~l---~~~ll~~l~~~~~~~w~ 690 (780)
T 2z6g_A 627 AEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRMSEDKPQDYKKRL---SVELTSSLFRTEPMTWN 690 (780)
T ss_dssp HHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHHTTSCTTHHHHH---HHHHHHHC---------
T ss_pred HHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHCCC---CHHHHHHHHHCCCCCCC
T ss_conf 89999778799999987589989999999999999718817554045---27899999807886646
No 5
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=1.00 E-value=1 Score=359.79 Aligned_cols=504 Identities=17% Similarity=0.188 Sum_probs=418.2
Q ss_pred HHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHCC--CHHHHHHHHHHHHHHCCCCH
Q ss_conf 5159568999987389988899999999983169934599853157838999999316--92699999999997402700
Q 001833 374 ILENYIPKLIYLLGSKNRDVRNRALIILHILVKDSNDTKERLANGDDAVESIVRSLGR--RIEERKLAVALLLELSTCNT 451 (1008)
Q Consensus 374 ~~~g~i~~L~~lL~s~~~~~~~~Al~~L~~Ls~~~~~~k~~i~~~~g~i~~lv~~L~~--~~~~~~~A~~~L~~Ls~~~~ 451 (1008)
...|++|.|+.+|++++..+|..|+..|.+++.++ .++..++...|+++.+++.|.+ +.+.+..|+..|++++..++
T Consensus 14 ~~~~~i~~Lv~lL~~~~~~v~~~A~~~L~~l~~~~-~~~~~~~~~~~~i~~Lv~~L~~~~~~~~~~~a~~~L~~ls~~~~ 92 (529)
T 1jdh_A 14 LATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKE-ASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHRE 92 (529)
T ss_dssp ---CHHHHHHHHHTCSCHHHHHHHHHHHHHHHTSH-HHHHHHHTCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSHH
T ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC-CCHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCH
T ss_conf 56734999999867899899999999999987478-11789986734699999998548999999999999999874924
Q ss_pred HHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC-CCCHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHC
Q ss_conf 3688420004699999985399948899999999851389-500999985284799999981599789999999999971
Q 001833 452 LRDQIGDVQGCILLLVTMASSDDNQASRDAQELLENLSFS-DDNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEME 530 (1008)
Q Consensus 452 ~~~~i~~~~g~i~~Lv~lL~~~~~~~~~~a~~aL~~Ls~~-~~n~~~i~~~g~i~~Li~~L~~~~~~~~~~aa~~L~~Ls 530 (1008)
++..+.+ .|+++.|+.+++++++.++..++.+|.+++.. +.++..+.+.|+++.|+.++.+++.+++..++.+|.+++
T Consensus 93 ~~~~i~~-~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~ll~~~~~~~~~~~~~~L~~la 171 (529)
T 1jdh_A 93 GLLAIFK-SGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILA 171 (529)
T ss_dssp HHHHHHH-TTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCTTHHHHHHHHTHHHHHHHGGGCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf 2799998-499999999883998899999999999970588420899988399799999980698889999999999998
Q ss_pred C-CHHHHHHHHHCCCHHHHHHHHCCCC-HHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHH
Q ss_conf 7-9446998750684798998722699-8789999999999508992058998609759999996014899910699999
Q 001833 531 L-TDHHKASLLEGNVLGPLLHLVSRGD-IQMKKVAVKALRNLSSVPQNGLQMIKEGAVGPLVDLLLHHSSSSSSLREETA 608 (1008)
Q Consensus 531 ~-~~~~k~~i~~~g~i~~Lv~lL~~~~-~~~~~~A~~aL~~L~~~~~~~~~~~~~g~i~~Lv~ll~~~~~~~~~~~~~a~ 608 (1008)
. +++++..+.+.|+++.|++++++++ ...+..+..+|.+++.+++++..+++.|+++.|+.++.+++ +.++..++
T Consensus 172 ~~~~~~~~~i~~~~~i~~L~~ll~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~g~~~~L~~ll~~~~---~~~~~~a~ 248 (529)
T 1jdh_A 172 YGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPS---QRLVQNCL 248 (529)
T ss_dssp TTCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSTTHHHHHHHTTHHHHHHTTTTSSC---HHHHHHHH
T ss_pred HCCHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHCCC---HHHHHHHH
T ss_conf 189788999998799899999987089188999999999998649222799998787999999986798---49999999
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHH
Q ss_conf 99999740535534688654534523489999985225894789999999999505999025999964169768999851
Q 001833 609 TAIMHLAVSTMYQESSQTPVTLLESDKEIFMLFSLINLTGPNVQQRILQTFNALCRSPSAGNIKTTLTQCSAIPVLVQLC 688 (1008)
Q Consensus 609 ~~L~nLa~~~~~~~~~~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~al~aL~~L~~~~~~~~~~~~i~e~~~i~~Li~ll 688 (1008)
++|.|++....... ...++++.|+.++.+.+++++..++++|.+++.. +...+..+.+.++++.|+.++
T Consensus 249 ~~L~~l~~~~~~~~---------~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~L~~~--~~~~~~~~~~~~~v~~L~~ll 317 (529)
T 1jdh_A 249 WTLRNLSDAATKQE---------GMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCN--NYKNKMMVCQVGGIEALVRTV 317 (529)
T ss_dssp HHHHHHHTTCTTCS---------CCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTTT--CHHHHHHHHHTTHHHHHHHHH
T ss_pred HHHHHHHCCCHHHH---------HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC--CHHHHHHHHHCCCHHHHHHHH
T ss_conf 99998762880567---------8884799999998399889999999999999669--878899999859869999999
Q ss_pred CCC--CHHHHHHHHHHHHHHCCCCCH--HHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCC
Q ss_conf 167--745899999999983448980--4788631634257999872289999999999999843999956589999639
Q 001833 689 EHD--NENVRANAVKLFCCLVDDGDE--AIIREHVGQKCLETLVTIIQSSHNEEEIASAMGILSKLPEVPQFTQWLLDAG 764 (1008)
Q Consensus 689 ~~~--~~~i~~~a~~~L~~Ls~~~~~--~~~~~~~~~~~i~~Lv~lL~~~~~~~v~~~a~~~L~nL~~~~~~~~~l~~~g 764 (1008)
.+. +++++..++++|.+++..... .....+...++++.|++++.++.+..++..++++|+|++.++.....+.+.|
T Consensus 318 ~~~~~~~~v~~~a~~~L~nl~~~~~~~~~~~~~i~~~~~i~~L~~lL~~~~~~~v~~~a~~~l~nl~~~~~~~~~~~~~~ 397 (529)
T 1jdh_A 318 LRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQG 397 (529)
T ss_dssp HHHTTCHHHHHHHHHHHHHHTSSSTTHHHHHHHHHHTTCHHHHHHTTSTTCCHHHHHHHHHHHHHHTTSGGGHHHHHHTT
T ss_pred HCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCC
T ss_conf 80697799999999999998769965899999999849936999873543516899999999999813832367888758
Q ss_pred CHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH--HCCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q ss_conf 87999998407998998235699999999977--1488998899999981996799999640995899999999864310
Q 001833 765 ALPIVLNFLKNGRQNDPNRFQVVENAVGALRR--FTAPTNLEWQKRAAEAGVIPKLVQLLEYGTTLTKEHAATSLARFSK 842 (1008)
Q Consensus 765 ~i~~L~~lL~~~~~~~~~~~~i~~~a~~aL~~--L~~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~Aa~aL~nls~ 842 (1008)
+++.++.++.+ .+..+++.++|++.| ++.+. ...+++..++.+|.+++.
T Consensus 398 ~i~~L~~ll~~------~~~~v~~~a~~~l~n~~~~~~~-----------------------~~~~i~~~~~~al~~L~~ 448 (529)
T 1jdh_A 398 AIPRLVQLLVR------AHQDTQRRTSMGGTQQQFVEGV-----------------------RMEEIVEGCTGALHILAR 448 (529)
T ss_dssp HHHHHHHHHHH------HHHHHC-----------CBTTB-----------------------CHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHH------HHHHHHHHHHCCCCCHHHHCCC-----------------------CHHHHHHHHHHHHHHHHC
T ss_conf 77899999998------7588888874056735665046-----------------------489999999999999960
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCH
Q ss_conf 47998888999986311489998765446853474430367434560789872058981365999999975320444421
Q 001833 843 NSLGLSRPIPKRKGFWCFSPPPEIGCQVHGGLCGIESSFCLLEANAVRPLVRVLEDPDHGACEASLDALVTLIEGERLQN 922 (1008)
Q Consensus 843 ~s~~l~~~~~~~~g~~~~~~~~~~~c~~h~~~c~~~~~~~l~~~g~i~~Lv~lL~~~d~~v~~~al~aL~~L~~~~~~~~ 922 (1008)
++++...+.+.|++++|+.++.++++.++..+..+|.++... ..
T Consensus 449 ---------------------------------~~~~~~~l~~~~~v~~l~~ll~~~~~~v~~~a~~~l~~l~~~---~~ 492 (529)
T 1jdh_A 449 ---------------------------------DVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQD---KE 492 (529)
T ss_dssp ---------------------------------SHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHTTS---HH
T ss_pred ---------------------------------CCHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCC---HH
T ss_conf ---------------------------------922789976068750899998188269999999999998448---77
Q ss_pred HHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHH
Q ss_conf 468978508369999982599957899999999998
Q 001833 923 GSKVLEDANAIDRMVRFLSSPSPKLQEKALDSVERI 958 (1008)
Q Consensus 923 ~~~~i~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l 958 (1008)
+...+.+.|+++.|.+++++++++++++|.++|.++
T Consensus 493 ~~~~i~~~~~~~~L~~l~~~~~~~v~~~a~~aL~~l 528 (529)
T 1jdh_A 493 AAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRM 528 (529)
T ss_dssp HHHHHHHTTCHHHHHHGGGCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHC
T ss_conf 789999768757899986699789999999999750
No 6
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=1.00 E-value=1 Score=355.74 Aligned_cols=480 Identities=15% Similarity=0.155 Sum_probs=225.7
Q ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHH-CCCHHHHHHHHCCC-CHHHHHHHHHHHHHHCCCCHHHHHH
Q ss_conf 431112004853377999999999998211234466751-59568999987389-9888999999999831699345998
Q 001833 337 IASMKPKLVSTEVEEVLHCLEQLQDLCQQRDQHREWVIL-ENYIPKLIYLLGSK-NRDVRNRALIILHILVKDSNDTKER 414 (1008)
Q Consensus 337 i~~~~~~l~~~~~~~~~~al~~L~~l~~~~~~~r~~i~~-~g~i~~L~~lL~s~-~~~~~~~Al~~L~~Ls~~~~~~k~~ 414 (1008)
++.+...+.++++..+..|+..|..++.+.+ +|..+.. .|+++.|+++|.++ +.+++..|+.+|.+++.+. +++..
T Consensus 16 i~~Lv~lL~~~~~~vr~~A~~~L~~La~~~~-~~~~i~~~~~~i~~Lv~~L~~~~~~~~~~~A~~~L~~Ls~~~-~~~~~ 93 (644)
T 2z6h_A 16 IPELTKLLNDEDQVVVNKAAVMVHQLSKKEA-SRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHR-EGLLA 93 (644)
T ss_dssp HHHHHHHHTCSCHHHHHHHHHHHHHHHTSTT-HHHHHTTCHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHTTSH-HHHHH
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCH-HHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCH-HHHHH
T ss_conf 9999998739999999999999999977875-399998650769999999864899999999999999984691-65899
Q ss_pred HHCCCCCHHHHHHHHCC-CHHHHHHHHHHHHHHCCCC-HHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCC-C
Q ss_conf 53157838999999316-9269999999999740270-0368842000469999998539994889999999985138-9
Q 001833 415 LANGDDAVESIVRSLGR-RIEERKLAVALLLELSTCN-TLRDQIGDVQGCILLLVTMASSDDNQASRDAQELLENLSF-S 491 (1008)
Q Consensus 415 i~~~~g~i~~lv~~L~~-~~~~~~~A~~~L~~Ls~~~-~~~~~i~~~~g~i~~Lv~lL~~~~~~~~~~a~~aL~~Ls~-~ 491 (1008)
+.+ .|+++.|+++|.+ +...+..|+.+|.+++..+ ..+..+.+ .|+++.|+.+++++++..+..++.+|.+++. +
T Consensus 94 i~~-~g~i~~Lv~lL~~~~~~v~~~A~~aL~nL~~~~~~~~~~v~~-~g~i~~Lv~lL~~~~~~~~~~a~~~L~~La~~~ 171 (644)
T 2z6h_A 94 IFK-SGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRL-AGGLQKMVALLNKTNVKFLAITTDCLQILAYGN 171 (644)
T ss_dssp HHT-TTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSTTHHHHHHH-TTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTC
T ss_pred HHH-CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH-CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 998-598999999980898999999999999997376103899997-799489999877597899999999999998269
Q ss_pred CCCHHHHHHCCCHHHHHHHHHCCC-HHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHH
Q ss_conf 500999985284799999981599-7899999999999717944699875068479899872269987899999999995
Q 001833 492 DDNVVQMAKANYFKHLLQRLSAGP-ESVKMRMATTLAEMELTDHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNL 570 (1008)
Q Consensus 492 ~~n~~~i~~~g~i~~Li~~L~~~~-~~~~~~aa~~L~~Ls~~~~~k~~i~~~g~i~~Lv~lL~~~~~~~~~~A~~aL~~L 570 (1008)
++++..+.+.|+++.|+.+++.++ ...++.++.+|.+++.+++++..+.+.|+++.|+.++.++++.++..++++|.+|
T Consensus 172 ~~~~~~i~~~g~v~~Lv~lL~~~~~~~~~~~a~~~L~nLs~~~~~~~~l~~~g~l~~L~~ll~~~~~~~~~~a~~~L~nL 251 (644)
T 2z6h_A 172 QESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNL 251 (644)
T ss_dssp HHHHHHHHHTTHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTCTTHHHHHHHTTHHHHHHTTTTCSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 58999999869849999999728828899999999999806950189999878799999998269889999999999998
Q ss_pred HCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC--C
Q ss_conf 08992058998609759999996014899910699999999997405355346886545345234899999852258--9
Q 001833 571 SSVPQNGLQMIKEGAVGPLVDLLLHHSSSSSSLREETATAIMHLAVSTMYQESSQTPVTLLESDKEIFMLFSLINLT--G 648 (1008)
Q Consensus 571 ~~~~~~~~~~~~~g~i~~Lv~ll~~~~~~~~~~~~~a~~~L~nLa~~~~~~~~~~~~~~~l~~~~~i~~L~~ll~~~--~ 648 (1008)
+...... ....++++.|+.++.+.+ +.+++.|+++|.+|+..+..... .+...++++.|+.++... .
T Consensus 252 ~~~~~~~--~~~~~~i~~Lv~lL~~~d---~~v~~~a~~aL~~L~~~~~~~~~------~v~~~g~v~~Lv~lL~~~~~~ 320 (644)
T 2z6h_A 252 SDAATKQ--EGMEGLLGTLVQLLGSDD---INVVTCAAGILSNLTCNNYKNKM------MVCQVGGIEALVRTVLRAGDR 320 (644)
T ss_dssp GGGCTTC--CSCHHHHHHHHHHTTCSC---HHHHHHHHHHHHHHHTTCHHHHH------HHHHTTHHHHHHHHHHHHTTC
T ss_pred HHCCHHH--HHHHHHHHHHHHHHCCCC---HHHHHHHHHHHHHHHCCCHHHHH------HHHHCCCHHHHHHHHHCCCCC
T ss_conf 6255143--436359999999973898---89999999999998719989999------999758879999999804985
Q ss_pred HHHHHHHHHHHHHHCCC-CCHHHHHHHHHHCCCHHHHHHHHCCCC-HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHH
Q ss_conf 47899999999995059-990259999641697689998511677-4589999999998344898047886316342579
Q 001833 649 PNVQQRILQTFNALCRS-PSAGNIKTTLTQCSAIPVLVQLCEHDN-ENVRANAVKLFCCLVDDGDEAIIREHVGQKCLET 726 (1008)
Q Consensus 649 ~~v~~~al~aL~~L~~~-~~~~~~~~~i~e~~~i~~Li~ll~~~~-~~i~~~a~~~L~~Ls~~~~~~~~~~~~~~~~i~~ 726 (1008)
+.++..++++|.+++.. ++....+..+.+.++++.|+.++.+.+ ..++..++++|.+++ .+. .....+.+.++++.
T Consensus 321 ~~v~~~a~~aL~nL~~~~~~~~~~q~~v~~~~~l~~L~~lL~~~~~~~v~~~a~~~L~nLa-~~~-~~~~~i~~~~~i~~ 398 (644)
T 2z6h_A 321 EDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLA-LCP-ANHAPLREQGAIPR 398 (644)
T ss_dssp HHHHHHHHHHHHHHTSSSTTHHHHHHHHHHTTHHHHHHHTTSTTCCHHHHHHHHHHHHHHT-TSG-GGHHHHHHTTHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHC-CCH-HHHHHHHHCCCHHH
T ss_conf 7999999999999855894479999999974691899998576674579999999999973-698-77799997687999
Q ss_pred HHHHHCCC---------------------CCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHH
Q ss_conf 99872289---------------------999999999999843999956589999639879999984079989982356
Q 001833 727 LVTIIQSS---------------------HNEEEIASAMGILSKLPEVPQFTQWLLDAGALPIVLNFLKNGRQNDPNRFQ 785 (1008)
Q Consensus 727 Lv~lL~~~---------------------~~~~v~~~a~~~L~nL~~~~~~~~~l~~~g~i~~L~~lL~~~~~~~~~~~~ 785 (1008)
|++++.+. ...+++..++++|++|+.++..+..+.+.|+++.|+.++.+ .+..
T Consensus 399 Lv~lL~~~~~~vr~~a~~al~n~~~~~~~~~~~v~~~a~~aL~~La~~~~~~~~l~~~~~i~~Lv~lL~~------~~~~ 472 (644)
T 2z6h_A 399 LVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYS------PIEN 472 (644)
T ss_dssp HHHHHHHHHHHHTTC----------CCSSCHHHHHHHHHHHHHHHTTSHHHHHHHHHTTCHHHHHHHTTC------SCHH
T ss_pred HHHHHHCCCHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHCC------CCHH
T ss_conf 9999850032466675204553011135659999999999999996199999998747867999999718------9778
Q ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 99999999977148899889999998199679999964099589999999986431
Q 001833 786 VVENAVGALRRFTAPTNLEWQKRAAEAGVIPKLVQLLEYGTTLTKEHAATSLARFS 841 (1008)
Q Consensus 786 i~~~a~~aL~~L~~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~Aa~aL~nls 841 (1008)
++..++++|++++. +++.+..+.+.|+++.|..++.++++.++..|+++|.+++
T Consensus 473 v~~~a~~aL~~l~~--~~~~~~~i~~~g~l~~L~~ll~~~~~~vr~~A~~aL~~l~ 526 (644)
T 2z6h_A 473 IQRVAAGVLCELAQ--DKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRMS 526 (644)
T ss_dssp HHHHHHHHHHHHHT--SHHHHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHC--CHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf 99999999999972--9877899997598668999876998899999999999986
No 7
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=1.00 E-value=1 Score=354.45 Aligned_cols=482 Identities=14% Similarity=0.137 Sum_probs=370.4
Q ss_pred HHHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHH-HHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCC
Q ss_conf 120048533779999999999982112344667-5159568999987389988899999999983169934599853157
Q 001833 341 KPKLVSTEVEEVLHCLEQLQDLCQQRDQHREWV-ILENYIPKLIYLLGSKNRDVRNRALIILHILVKDSNDTKERLANGD 419 (1008)
Q Consensus 341 ~~~l~~~~~~~~~~al~~L~~l~~~~~~~r~~i-~~~g~i~~L~~lL~s~~~~~~~~Al~~L~~Ls~~~~~~k~~i~~~~ 419 (1008)
..++...+.+....+...+-.+..........+ ...|++|.++.++.+++..+|+.|+.++.+.+.+ ..+|..+.+ .
T Consensus 253 ~~~~~~~~~~~~~~a~~alt~i~~g~~~~~~~~~~~~G~v~~li~Ll~s~~~~~q~~A~~al~~aa~~-~~~R~~I~~-~ 330 (810)
T 3now_A 253 KDKLLAPDMESKVRVTVAITALLNGPLDVGNQVVAREGILQMILAMATTDDELQQRVACECLIAASSK-KDKAKALCE-Q 330 (810)
T ss_dssp HHHHSSCCHHHHHHHHHHHHHHHSSSHHHHHHHHHTTTHHHHHHHHHHSSCHHHHHHHHHHHHHHTTS-HHHHHTTHH-H
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC-CHHHHHHHH-C
T ss_conf 99854687376899999999996598988899983202699999986799788999999999998189-099999998-6
Q ss_pred CCHHHHHHHHCCC-HHHHHHHHHHHHHHCCCC--HHH-HHHHC--CCCHHHHHHHHHCCC--CHHHHHHHHHHHHHHCCC
Q ss_conf 8389999993169-269999999999740270--036-88420--004699999985399--948899999999851389
Q 001833 420 DAVESIVRSLGRR-IEERKLAVALLLELSTCN--TLR-DQIGD--VQGCILLLVTMASSD--DNQASRDAQELLENLSFS 491 (1008)
Q Consensus 420 g~i~~lv~~L~~~-~~~~~~A~~~L~~Ls~~~--~~~-~~i~~--~~g~i~~Lv~lL~~~--~~~~~~~a~~aL~~Ls~~ 491 (1008)
| ++.|+.++.++ ...+..|+..|.+++... +.. ..+.. ....++.|+.+|.++ |++++.+|+.+|.+|+..
T Consensus 331 g-v~~L~~Ll~s~~~~vr~~Al~~L~kl~s~~~~d~~~~~~~~g~i~~Lv~~l~~lL~~~~~d~~v~~~AveaLayLS~~ 409 (810)
T 3now_A 331 G-VDILKRLYHSKNDGIRVRALVGLCKLGSYGGQDAAIRPFGDGAALKLAEACRRFLIKPGKDKDIRRWAADGLAYLTLD 409 (810)
T ss_dssp H-HHHHHHHTTCSCHHHHHHHHHHHHHHHTTTTTTTSCCSSTTTHHHHHHHHHHHHHHCSSCCSSHHHHHHHHHHHHTTS
T ss_pred C-CHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 9-679999874897889999999999744144668653532004499999999998657899878999999999998379
Q ss_pred CCCHHHHHH-CCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCH------------------------------HHH---H
Q ss_conf 500999985-284799999981599789999999999971794------------------------------469---9
Q 001833 492 DDNVVQMAK-ANYFKHLLQRLSAGPESVKMRMATTLAEMELTD------------------------------HHK---A 537 (1008)
Q Consensus 492 ~~n~~~i~~-~g~i~~Li~~L~~~~~~~~~~aa~~L~~Ls~~~------------------------------~~k---~ 537 (1008)
++.+..++. .|++++|++++++++..++..++++|+|++... ..+ .
T Consensus 410 ~~vk~~lv~d~g~Ip~LV~LL~s~d~~i~~~al~~L~NLt~~~d~q~~~~~l~~la~~s~~~v~~~~~ld~~~~v~~r~~ 489 (810)
T 3now_A 410 AECKEKLIEDKASIHALMDLARGGNQSCLYGVVTTFVNLCNAYEKQEMLPEMIELAKFAKQHIPEEHELDDVDFINKRIT 489 (810)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHTTCGGGHHHHHHHHHHHTTCSCCCCCCCSCGGGTTTTCCSCCCSSCHHHHHHHHHHHH
T ss_pred CHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
T ss_conf 27899999820649999999679981899999999999857960212128999999876424765564331777799999
Q ss_pred HHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf 87506847989987226998789999999999508992058998609759999996014899910699999999997405
Q 001833 538 SLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQMIKEGAVGPLVDLLLHHSSSSSSLREETATAIMHLAVS 617 (1008)
Q Consensus 538 ~i~~~g~i~~Lv~lL~~~~~~~~~~A~~aL~~L~~~~~~~~~~~~~g~i~~Lv~ll~~~~~~~~~~~~~a~~~L~nLa~~ 617 (1008)
.+.+.|++|.|+.+++++++.+++.|+++|.|++.+++++..+++.|++|+|+.++.+++ +..++.|+++|.|++.+
T Consensus 490 ~VveaGaVp~LV~LL~s~s~~vqe~Aa~aL~NLA~d~~~r~~Vv~~Gaip~Lv~LL~s~~---~~~k~~Aa~AL~nL~~~ 566 (810)
T 3now_A 490 VLANEGITTALCALAKTESHNSQELIARVLNAVCGLKELRGKVVQEGGVKALLRMALEGT---EKGKRHATQALARIGIT 566 (810)
T ss_dssp HHHHTTHHHHHHHHHTCCCHHHHHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHHHHSSC---HHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCC---HHHHHHHHHHHHHHHCC
T ss_conf 999885999999998599989999999999998589889999998789999999970598---88999999999999658
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHCCC-CHHHH
Q ss_conf 35534688654534523489999985225894789999999999505999025999964169768999851167-74589
Q 001833 618 TMYQESSQTPVTLLESDKEIFMLFSLINLTGPNVQQRILQTFNALCRSPSAGNIKTTLTQCSAIPVLVQLCEHD-NENVR 696 (1008)
Q Consensus 618 ~~~~~~~~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~al~aL~~L~~~~~~~~~~~~i~e~~~i~~Li~ll~~~-~~~i~ 696 (1008)
...... + .. ..+ .++++.|+.++.++ +...+
T Consensus 567 ~~p~~~-------~------------------------------------~~---~~~--~~aIppLv~LL~~~~~~l~~ 598 (810)
T 3now_A 567 INPEVS-------F------------------------------------SG---QRS--LDVIRPLLNLLQQDCTALEN 598 (810)
T ss_dssp SCHHHH-------T------------------------------------TT---HHH--HHTHHHHHHTTSTTSCHHHH
T ss_pred CCHHHH-------H------------------------------------CC---HHH--HCHHHHHHHHHCCCCCHHHH
T ss_conf 985665-------3------------------------------------10---023--15799999986789827889
Q ss_pred HHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH-CCCHHHHHHHHHC
Q ss_conf 999999998344898047886316342579998722899999999999998439999565899996-3987999998407
Q 001833 697 ANAVKLFCCLVDDGDEAIIREHVGQKCLETLVTIIQSSHNEEEIASAMGILSKLPEVPQFTQWLLD-AGALPIVLNFLKN 775 (1008)
Q Consensus 697 ~~a~~~L~~Ls~~~~~~~~~~~~~~~~i~~Lv~lL~~~~~~~v~~~a~~~L~nL~~~~~~~~~l~~-~g~i~~L~~lL~~ 775 (1008)
..|+++|.||+ .++++....+.+.|+++.|+.++.+. +..++.+|+++|+||+.+++....+.+ .|.++.|+.++.+
T Consensus 599 ~eAl~AL~NLa-~~~d~~~~~Ii~aG~l~~Lv~LL~s~-~~~Vq~~A~~~L~NLa~~~~~~~~~v~~~g~l~~Lv~LL~s 676 (810)
T 3now_A 599 FESLMALTNLA-SMNESVRQRIIKEQGVSKIEYYLMED-HLYLTRAAAQCLCNLVMSEDVIKMFEGNNDRVKFLALLCED 676 (810)
T ss_dssp HHHHHHHHHHT-TSCHHHHHHHHHTTHHHHHHHHHHSC-CTTHHHHHHHHHHHHTTSHHHHHHHHSSSSHHHHHHHGGGC
T ss_pred HHHHHHHHHHH-CCCHHHHHHHHHCCCHHHHHHHHCCC-CHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHCC
T ss_conf 99999999984-69989999999868889999998289-99999999999999967959999998616808999998469
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH-CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 998998235699999999977148899889999998-1996799999640995899999999864310479988889999
Q 001833 776 GRQNDPNRFQVVENAVGALRRFTAPTNLEWQKRAAE-AGVIPKLVQLLEYGTTLTKEHAATSLARFSKNSLGLSRPIPKR 854 (1008)
Q Consensus 776 ~~~~~~~~~~i~~~a~~aL~~L~~~~~~~~~~~i~~-~g~i~~Lv~lL~~~~~~v~~~Aa~aL~nls~~s~~l~~~~~~~ 854 (1008)
.+..+++.|+|+|++++.+ ++...+.+.+ .|+++.|+.+|.+++.+++..|+|+|.|++..
T Consensus 677 ------~d~~vq~~Aa~ALanLt~~-s~~~~~~ii~~~g~I~~Lv~LL~s~d~~vq~~A~~aL~NL~~~----------- 738 (810)
T 3now_A 677 ------EDEETATACAGALAIITSV-SVKCCEKILAIASWLDILHTLIANPSPAVQHRGIVIILNMINA----------- 738 (810)
T ss_dssp ------SSHHHHHHHHHHHHHHHHH-CHHHHHHHHTSTTHHHHHHHHHTCSSHHHHHHHHHHHHHHHTT-----------
T ss_pred ------CCHHHHHHHHHHHHHHHCC-CHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHC-----------
T ss_conf ------9989999999999998679-9899999998748898999987799889999999999999869-----------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHCCC---CHHHHHHHHHHHHHHH-CC
Q ss_conf 863114899987654468534744303674345607898720589---8136599999997532-04
Q 001833 855 KGFWCFSPPPEIGCQVHGGLCGIESSFCLLEANAVRPLVRVLEDP---DHGACEASLDALVTLI-EG 917 (1008)
Q Consensus 855 ~g~~~~~~~~~~~c~~h~~~c~~~~~~~l~~~g~i~~Lv~lL~~~---d~~v~~~al~aL~~L~-~~ 917 (1008)
+.++...++++|++++|++++... +.++.+.|+.+|.+++ .+
T Consensus 739 ---------------------s~e~~~~l~e~G~i~~L~~LL~~~d~~~~~i~e~Al~aL~~ll~~g 784 (810)
T 3now_A 739 ---------------------GEEIAKKLFETDIMELLSGLGQLPDDTRAKAREVATQCLAAAERYR 784 (810)
T ss_dssp ---------------------CHHHHHHHHTSTHHHHHTTSCCCTTSTTHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------CHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf ---------------------9999999998978899999982766576799999999999998679
No 8
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=1.00 E-value=1 Score=351.89 Aligned_cols=503 Identities=19% Similarity=0.202 Sum_probs=431.0
Q ss_pred CCCHHHHHHHHCC-CHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHCC-CCHHHHHHHHHHHHHHCCCCCCHH
Q ss_conf 7838999999316-92699999999997402700368842000469999998539-994889999999985138950099
Q 001833 419 DDAVESIVRSLGR-RIEERKLAVALLLELSTCNTLRDQIGDVQGCILLLVTMASS-DDNQASRDAQELLENLSFSDDNVV 496 (1008)
Q Consensus 419 ~g~i~~lv~~L~~-~~~~~~~A~~~L~~Ls~~~~~~~~i~~~~g~i~~Lv~lL~~-~~~~~~~~a~~aL~~Ls~~~~n~~ 496 (1008)
.|+++.++++|.+ +...+..|+..|.+++.++..+..+....|+++.|+.++.+ +++.++..++.+|.+++..++++.
T Consensus 16 ~~~i~~Lv~lL~~~~~~v~~~A~~~L~~l~~~~~~~~~~~~~~~~i~~Lv~~L~~~~~~~~~~~a~~~L~~ls~~~~~~~ 95 (529)
T 1jdh_A 16 TRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLL 95 (529)
T ss_dssp -CHHHHHHHHHTCSCHHHHHHHHHHHHHHHTSHHHHHHHHTCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSHHHHH
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHH
T ss_conf 73499999986789989999999999998747811789986734699999998548999999999999999874924279
Q ss_pred HHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCC-HHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHC-CC
Q ss_conf 998528479999998159978999999999997179-4469987506847989987226998789999999999508-99
Q 001833 497 QMAKANYFKHLLQRLSAGPESVKMRMATTLAEMELT-DHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSS-VP 574 (1008)
Q Consensus 497 ~i~~~g~i~~Li~~L~~~~~~~~~~aa~~L~~Ls~~-~~~k~~i~~~g~i~~Lv~lL~~~~~~~~~~A~~aL~~L~~-~~ 574 (1008)
.+.+.|+++.|+.++.+++++++..++++|.+++.. +..+..+.+.|+++.|++++.++++.++..++.+|.+++. ++
T Consensus 96 ~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~ll~~~~~~~~~~~~~~L~~la~~~~ 175 (529)
T 1jdh_A 96 AIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQ 175 (529)
T ss_dssp HHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCTTHHHHHHHHTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCH
T ss_conf 99984999999998839988999999999999705884208999883997999999806988899999999999981897
Q ss_pred CHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHH
Q ss_conf 20589986097599999960148999106999999999974053553468865453452348999998522589478999
Q 001833 575 QNGLQMIKEGAVGPLVDLLLHHSSSSSSLREETATAIMHLAVSTMYQESSQTPVTLLESDKEIFMLFSLINLTGPNVQQR 654 (1008)
Q Consensus 575 ~~~~~~~~~g~i~~Lv~ll~~~~~~~~~~~~~a~~~L~nLa~~~~~~~~~~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~ 654 (1008)
+++..+.+.|+++.|+.++.++.. ...+..+..+|++++.++..+. .+...++++.++.++.+.++.++..
T Consensus 176 ~~~~~i~~~~~i~~L~~ll~~~~~--~~~~~~a~~~L~~l~~~~~~~~-------~~~~~g~~~~L~~ll~~~~~~~~~~ 246 (529)
T 1jdh_A 176 ESKLIILASGGPQALVNIMRTYTY--EKLLWTTSRVLKVLSVCSSNKP-------AIVEAGGMQALGLHLTDPSQRLVQN 246 (529)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHCCC--HHHHHHHHHHHHHHTTSTTHHH-------HHHHTTHHHHHHTTTTSSCHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHCCH--HHHHHHHHHHHHHHHCCCCCHH-------HHHHCCCHHHHHHHHHCCCHHHHHH
T ss_conf 889999987998999999870891--8899999999999864922279-------9998787999999986798499999
Q ss_pred HHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHCCC
Q ss_conf 99999995059990259999641697689998511677458999999999834489804788631634257999872289
Q 001833 655 ILQTFNALCRSPSAGNIKTTLTQCSAIPVLVQLCEHDNENVRANAVKLFCCLVDDGDEAIIREHVGQKCLETLVTIIQSS 734 (1008)
Q Consensus 655 al~aL~~L~~~~~~~~~~~~i~e~~~i~~Li~ll~~~~~~i~~~a~~~L~~Ls~~~~~~~~~~~~~~~~i~~Lv~lL~~~ 734 (1008)
++++|.+++....... ...++++.|+.++.+++++++..++++|.+++ .+.++....+.+.++++.|++++.+.
T Consensus 247 a~~~L~~l~~~~~~~~-----~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~L~-~~~~~~~~~~~~~~~v~~L~~ll~~~ 320 (529)
T 1jdh_A 247 CLWTLRNLSDAATKQE-----GMEGLLGTLVQLLGSDDINVVTCAAGILSNLT-CNNYKNKMMVCQVGGIEALVRTVLRA 320 (529)
T ss_dssp HHHHHHHHHTTCTTCS-----CCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHT-TTCHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHH-----HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH-CCCHHHHHHHHHCCCHHHHHHHHHCC
T ss_conf 9999998762880567-----88847999999983998899999999999996-69878899999859869999999806
Q ss_pred -CCHHHHHHHHHHHHCCCC-CHH---HHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHH
Q ss_conf -999999999999843999-956---589999639879999984079989982356999999999771488998899999
Q 001833 735 -HNEEEIASAMGILSKLPE-VPQ---FTQWLLDAGALPIVLNFLKNGRQNDPNRFQVVENAVGALRRFTAPTNLEWQKRA 809 (1008)
Q Consensus 735 -~~~~v~~~a~~~L~nL~~-~~~---~~~~l~~~g~i~~L~~lL~~~~~~~~~~~~i~~~a~~aL~~L~~~~~~~~~~~i 809 (1008)
++.+++..++++|+||+. ++. .+..+.+.|+++.++.++.++ .+..+++.++|+|+|++.+ +..+..+
T Consensus 321 ~~~~~v~~~a~~~L~nl~~~~~~~~~~~~~i~~~~~i~~L~~lL~~~-----~~~~v~~~a~~~l~nl~~~--~~~~~~~ 393 (529)
T 1jdh_A 321 GDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPP-----SHWPLIKATVGLIRNLALC--PANHAPL 393 (529)
T ss_dssp TTCHHHHHHHHHHHHHHTSSSTTHHHHHHHHHHTTCHHHHHHTTSTT-----CCHHHHHHHHHHHHHHTTS--GGGHHHH
T ss_pred CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCC-----CCHHHHHHHHHHHHHHHCC--HHHHHHH
T ss_conf 97799999999999998769965899999999849936999873543-----5168999999999998138--3236788
Q ss_pred HHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCH
Q ss_conf 98199679999964099589999999986431047998888999986311489998765446853474430367434560
Q 001833 810 AEAGVIPKLVQLLEYGTTLTKEHAATSLARFSKNSLGLSRPIPKRKGFWCFSPPPEIGCQVHGGLCGIESSFCLLEANAV 889 (1008)
Q Consensus 810 ~~~g~i~~Lv~lL~~~~~~v~~~Aa~aL~nls~~s~~l~~~~~~~~g~~~~~~~~~~~c~~h~~~c~~~~~~~l~~~g~i 889 (1008)
.+.|++|.|+.++.++++++|+.|+|++.|.... .++
T Consensus 394 ~~~~~i~~L~~ll~~~~~~v~~~a~~~l~n~~~~----------~~~--------------------------------- 430 (529)
T 1jdh_A 394 REQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFV----------EGV--------------------------------- 430 (529)
T ss_dssp HHTTHHHHHHHHHHHHHHHHC-----------CB----------TTB---------------------------------
T ss_pred HHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHH----------CCC---------------------------------
T ss_conf 8758778999999987588888874056735665----------046---------------------------------
Q ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHH-CCCCCCHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHH
Q ss_conf 78987205898136599999997532-04444214689785083699999825999578999999999985384778884
Q 001833 890 RPLVRVLEDPDHGACEASLDALVTLI-EGERLQNGSKVLEDANAIDRMVRFLSSPSPKLQEKALDSVERIFRLPEFKQKY 968 (1008)
Q Consensus 890 ~~Lv~lL~~~d~~v~~~al~aL~~L~-~~~~~~~~~~~i~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 968 (1008)
.+.+++..++.+|.++. +. ..+..+.+.|+++.++.++.++++.+++.+.+.+.++...++.+..+
T Consensus 431 ---------~~~~i~~~~~~al~~L~~~~----~~~~~l~~~~~v~~l~~ll~~~~~~v~~~a~~~l~~l~~~~~~~~~i 497 (529)
T 1jdh_A 431 ---------RMEEIVEGCTGALHILARDV----HNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAI 497 (529)
T ss_dssp ---------CHHHHHHHHHHHHHHHTTSH----HHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHTTSHHHHHHH
T ss_pred ---------CHHHHHHHHHHHHHHHHCCC----HHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHH
T ss_conf ---------48999999999999996092----27899760687508999981882699999999999984487778999
Q ss_pred CCCC-CCHHHHHCCCCCCHHHHHHHHHHHHHH
Q ss_conf 1446-711344212489503689999999982
Q 001833 969 GKSA-QMPLVDLTQRGNSSMKSLSARVLAHLN 999 (1008)
Q Consensus 969 ~~~~-~~~Lv~l~~~~~~~~~~~aa~~L~~L~ 999 (1008)
...+ ...|.+++.+.|+.++..|..+|.+|.
T Consensus 498 ~~~~~~~~L~~l~~~~~~~v~~~a~~aL~~l~ 529 (529)
T 1jdh_A 498 EAEGATAPLTELLHSRNEGVATYAAAVLFRMS 529 (529)
T ss_dssp HHTTCHHHHHHGGGCSSHHHHHHHHHHHHHHC
T ss_pred HHCCCHHHHHHHHCCCCHHHHHHHHHHHHHCC
T ss_conf 97687578999866997899999999997509
No 9
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=1.00 E-value=1 Score=349.04 Aligned_cols=415 Identities=19% Similarity=0.280 Sum_probs=356.3
Q ss_pred CCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC--CCHHHHHHCCCHHHHHHHHHCC-CHHHHHHHHHHHHHHC-CCHHH
Q ss_conf 046999999853999488999999998513895--0099998528479999998159-9789999999999971-79446
Q 001833 460 QGCILLLVTMASSDDNQASRDAQELLENLSFSD--DNVVQMAKANYFKHLLQRLSAG-PESVKMRMATTLAEME-LTDHH 535 (1008)
Q Consensus 460 ~g~i~~Lv~lL~~~~~~~~~~a~~aL~~Ls~~~--~n~~~i~~~g~i~~Li~~L~~~-~~~~~~~aa~~L~~Ls-~~~~~ 535 (1008)
...|+.+|..++++|+..+..|+..++++...+ +....++++|++|+|+++|+.. +++++..|+++|++++ .++++
T Consensus 56 ~~~i~~~v~~l~s~d~~~q~~a~~~~rklls~e~~ppi~~ii~~G~ip~LV~lL~~~~~~~lq~~Aa~aL~nias~~~e~ 135 (510)
T 3ul1_B 56 NWSVEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQ 135 (510)
T ss_dssp SCCHHHHHHHHTSSCHHHHHHHHHHHHHHHTCSSCCCHHHHHHTTHHHHHHHHTTCTTCHHHHHHHHHHHHHHHTSCHHH
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHH
T ss_conf 40099999984599999999999999998657889629999988888999998778998999999999999996499999
Q ss_pred HHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHC-CCCHHHHHHHCCCHHHHHHHHCCCCCC--CCCHHHHHHHHHH
Q ss_conf 9987506847989987226998789999999999508-992058998609759999996014899--9106999999999
Q 001833 536 KASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSS-VPQNGLQMIKEGAVGPLVDLLLHHSSS--SSSLREETATAIM 612 (1008)
Q Consensus 536 k~~i~~~g~i~~Lv~lL~~~~~~~~~~A~~aL~~L~~-~~~~~~~~~~~g~i~~Lv~ll~~~~~~--~~~~~~~a~~~L~ 612 (1008)
+..+.+.|++|.|+.+|.++++.+++.|+++|+||+. .+.++..+++.|++++|+.++...... ...+...++++|.
T Consensus 136 ~~~vv~~GaIp~Lv~lL~s~~~~v~e~A~~aL~nLa~d~~~~r~~v~~~G~i~~Ll~lL~~~~~~~~~~~~~~~a~~~L~ 215 (510)
T 3ul1_B 136 TKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLS 215 (510)
T ss_dssp HHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTCSSCGGGSCHHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 99999788799999988699989999999999999718899999999869817999999734610445999999999999
Q ss_pred HHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHCCCC
Q ss_conf 97405355346886545345234899999852258947899999999995059990259999641697689998511677
Q 001833 613 HLAVSTMYQESSQTPVTLLESDKEIFMLFSLINLTGPNVQQRILQTFNALCRSPSAGNIKTTLTQCSAIPVLVQLCEHDN 692 (1008)
Q Consensus 613 nLa~~~~~~~~~~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~al~aL~~L~~~~~~~~~~~~i~e~~~i~~Li~ll~~~~ 692 (1008)
|++.+...... .....++++.|+.++.+++
T Consensus 216 nl~~~~~~~~~--------------------------------------------------~~~~~~~lp~L~~LL~~~~ 245 (510)
T 3ul1_B 216 NLCRNKNPAPP--------------------------------------------------LDAVEQILPTLVRLLHHND 245 (510)
T ss_dssp HHHCCCSSCCC--------------------------------------------------HHHHHHHHHHHHHHTTCSC
T ss_pred HHHHCCCCHHH--------------------------------------------------HHHHHHHHHHHHHHHHCCC
T ss_conf 87531110257--------------------------------------------------9999769999999981687
Q ss_pred HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCC-CHHHHHHHHHCCCHHHHHH
Q ss_conf 458999999999834489804788631634257999872289999999999999843999-9565899996398799999
Q 001833 693 ENVRANAVKLFCCLVDDGDEAIIREHVGQKCLETLVTIIQSSHNEEEIASAMGILSKLPE-VPQFTQWLLDAGALPIVLN 771 (1008)
Q Consensus 693 ~~i~~~a~~~L~~Ls~~~~~~~~~~~~~~~~i~~Lv~lL~~~~~~~v~~~a~~~L~nL~~-~~~~~~~l~~~g~i~~L~~ 771 (1008)
++++..++++|.+|+ .+.+.....+...|+++.|+.++.+ .+..++..++++|+|++. ++..+..+.+.|+++.|+.
T Consensus 246 ~~v~~~A~~aL~~L~-~~~~~~~~~i~~~g~i~~Lv~lL~~-~~~~v~~~al~aL~nl~~~~~~~~~~i~~~g~l~~L~~ 323 (510)
T 3ul1_B 246 PEVLADSCWAISYLT-DGPNERIEMVVKKGVVPQLVKLLGA-TELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPS 323 (510)
T ss_dssp HHHHHHHHHHHHHHT-SSCHHHHHHHHTTTCHHHHHHHHTC-SCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTGGGGCC-
T ss_pred HHHHHHHHHHHHHHH-HCHHHHHHHHHHCCCCHHHHHHHCC-CCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHH
T ss_conf 999999999999986-0215667899863651255566138-87134268899998862377888888761241278888
Q ss_pred HHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 84079989982356999999999771488998899999981996799999640995899999999864310479988889
Q 001833 772 FLKNGRQNDPNRFQVVENAVGALRRFTAPTNLEWQKRAAEAGVIPKLVQLLEYGTTLTKEHAATSLARFSKNSLGLSRPI 851 (1008)
Q Consensus 772 lL~~~~~~~~~~~~i~~~a~~aL~~L~~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~Aa~aL~nls~~s~~l~~~~ 851 (1008)
++.+ .+..+++.++|+|+|++.+ +++....+.+.|++|.|+.++.+++..++..|+|+|.|++...
T Consensus 324 LL~~------~~~~v~~~A~~aL~nl~a~-~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~Aa~aL~Nl~~~~------- 389 (510)
T 3ul1_B 324 LLTN------PKTNIQKEATWTMSNITAG-RQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGG------- 389 (510)
T ss_dssp CTTC------SSHHHHHHHHHHHHHHTTS-CHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHC-------
T ss_pred HHCC------CCHHHHHHHHHHHHHHHCC-CHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC-------
T ss_conf 7249------9889999999999999708-4989999885387889999973898899999999999987069-------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHH-CCCC---CCHHHHHH
Q ss_conf 9998631148999876544685347443036743456078987205898136599999997532-0444---42146897
Q 001833 852 PKRKGFWCFSPPPEIGCQVHGGLCGIESSFCLLEANAVRPLVRVLEDPDHGACEASLDALVTLI-EGER---LQNGSKVL 927 (1008)
Q Consensus 852 ~~~~g~~~~~~~~~~~c~~h~~~c~~~~~~~l~~~g~i~~Lv~lL~~~d~~v~~~al~aL~~L~-~~~~---~~~~~~~i 927 (1008)
+.++...+++.|++++|+++|...|+.++..++++|.+++ .++. .+.....|
T Consensus 390 ------------------------~~~~~~~L~~~g~i~~L~~LL~~~d~~i~~~~L~aL~nil~~~~~~~~~~~~~~~i 445 (510)
T 3ul1_B 390 ------------------------TVEQIVYLVHCGIIEPLMNLLSAKDTKIIQVILDAISNIFQAAEKLGETEKLSIMI 445 (510)
T ss_dssp ------------------------CHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHH
T ss_pred ------------------------CHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf ------------------------99999999979789999998669999999999999999999857426658999999
Q ss_pred HHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHH
Q ss_conf 8508369999982599957899999999998538477
Q 001833 928 EDANAIDRMVRFLSSPSPKLQEKALDSVERIFRLPEF 964 (1008)
Q Consensus 928 ~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~ 964 (1008)
.++||+++|..+..++|.+++++|..++++||..++-
T Consensus 446 ee~ggl~~ie~Lq~~~n~~i~~~A~~iie~yf~~~~~ 482 (510)
T 3ul1_B 446 EECGGLDKIEALQRHENESVYKASLNLIEKYFSVEEE 482 (510)
T ss_dssp HHTTHHHHHHHGGGCSSHHHHHHHHHHHHHHCC----
T ss_pred HHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCC
T ss_conf 9868599999987599899999999999997798533
No 10
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=1.00 E-value=1 Score=343.42 Aligned_cols=415 Identities=19% Similarity=0.280 Sum_probs=354.2
Q ss_pred CCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC--CCCHHHHHHCCCHHHHHHHHHCC-CHHHHHHHHHHHHHHCC-CHHH
Q ss_conf 04699999985399948899999999851389--50099998528479999998159-97899999999999717-9446
Q 001833 460 QGCILLLVTMASSDDNQASRDAQELLENLSFS--DDNVVQMAKANYFKHLLQRLSAG-PESVKMRMATTLAEMEL-TDHH 535 (1008)
Q Consensus 460 ~g~i~~Lv~lL~~~~~~~~~~a~~aL~~Ls~~--~~n~~~i~~~g~i~~Li~~L~~~-~~~~~~~aa~~L~~Ls~-~~~~ 535 (1008)
...++.++..+.++|+..+..|+..++++... .+....+++.|++|.|+++|... +++++..++++|++++. +++.
T Consensus 75 ~~~l~~lv~~l~s~d~~~q~~a~~~~rklLs~~~~~~i~~ii~~G~ip~Lv~lL~~~~~~~~q~~Aa~aL~nia~~~~~~ 154 (529)
T 3tpo_A 75 NWSVEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQ 154 (529)
T ss_dssp SCCHHHHHHHHTSSCHHHHHHHHHHHHHHHTSSSCCCHHHHHHTTHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTSCHHH
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHH
T ss_conf 88999999985699999999999999998727898449999988899999998768998999999999999997499999
Q ss_pred HHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHC-CCCHHHHHHHCCCHHHHHHHHCCCCCC--CCCHHHHHHHHHH
Q ss_conf 9987506847989987226998789999999999508-992058998609759999996014899--9106999999999
Q 001833 536 KASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSS-VPQNGLQMIKEGAVGPLVDLLLHHSSS--SSSLREETATAIM 612 (1008)
Q Consensus 536 k~~i~~~g~i~~Lv~lL~~~~~~~~~~A~~aL~~L~~-~~~~~~~~~~~g~i~~Lv~ll~~~~~~--~~~~~~~a~~~L~ 612 (1008)
+..+.+.|++|.|+.++.++++.+++.|+++|+||+. ++.++..+++.|++++|+.++...... ...+...++++|.
T Consensus 155 ~~~vv~~Gaip~Lv~LL~s~~~~v~e~A~~aL~nLa~~~~~~r~~i~~~g~i~~Ll~lL~~~~~~~~~~~~~~~a~~~L~ 234 (529)
T 3tpo_A 155 TKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGAGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLS 234 (529)
T ss_dssp HHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHTTCSSCGGGSCHHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_conf 99999888899999987699989999999999987446889999998738727899987324403768999999999999
Q ss_pred HHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHCCCC
Q ss_conf 97405355346886545345234899999852258947899999999995059990259999641697689998511677
Q 001833 613 HLAVSTMYQESSQTPVTLLESDKEIFMLFSLINLTGPNVQQRILQTFNALCRSPSAGNIKTTLTQCSAIPVLVQLCEHDN 692 (1008)
Q Consensus 613 nLa~~~~~~~~~~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~al~aL~~L~~~~~~~~~~~~i~e~~~i~~Li~ll~~~~ 692 (1008)
+++.+...... .....++++.|+.++.+++
T Consensus 235 nl~~~~~~~~~--------------------------------------------------~~~~~~~lp~L~~LL~~~~ 264 (529)
T 3tpo_A 235 NLCRNKNPAPP--------------------------------------------------LDAVEQILPTLVRLLHHND 264 (529)
T ss_dssp HHHCCCTTCCC--------------------------------------------------HHHHHHHHHHHHHHTTSSC
T ss_pred HHHHCCCCHHH--------------------------------------------------HHHHHHHHHHHHHHHCCCC
T ss_conf 98741321136--------------------------------------------------9998648999999955996
Q ss_pred HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCC-CHHHHHHHHHCCCHHHHHH
Q ss_conf 458999999999834489804788631634257999872289999999999999843999-9565899996398799999
Q 001833 693 ENVRANAVKLFCCLVDDGDEAIIREHVGQKCLETLVTIIQSSHNEEEIASAMGILSKLPE-VPQFTQWLLDAGALPIVLN 771 (1008)
Q Consensus 693 ~~i~~~a~~~L~~Ls~~~~~~~~~~~~~~~~i~~Lv~lL~~~~~~~v~~~a~~~L~nL~~-~~~~~~~l~~~g~i~~L~~ 771 (1008)
++++..++++|.+++ .+.++....+...|+++.|+.++.+ .+..++..++++|+|++. ++..+..+.+.|+++.|+.
T Consensus 265 ~~v~~~a~~aL~~l~-~~~~~~~~~v~~~g~i~~Lv~lL~~-~~~~v~~~a~~aL~nl~~~~~~~~~~i~~~g~l~~L~~ 342 (529)
T 3tpo_A 265 PEVLADSCWAISYLT-DGPNERIEMVVKKGVVPQLVKLLGA-TELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPS 342 (529)
T ss_dssp HHHHHHHHHHHHHHH-SSCHHHHHHHHTTTCHHHHHHHHTC-SCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTGGGGHHH
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCHHHHHHHHCC-CCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHH
T ss_conf 889999999999865-2000567899963602889988618-97047788999999997164687788760242789999
Q ss_pred HHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 84079989982356999999999771488998899999981996799999640995899999999864310479988889
Q 001833 772 FLKNGRQNDPNRFQVVENAVGALRRFTAPTNLEWQKRAAEAGVIPKLVQLLEYGTTLTKEHAATSLARFSKNSLGLSRPI 851 (1008)
Q Consensus 772 lL~~~~~~~~~~~~i~~~a~~aL~~L~~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~Aa~aL~nls~~s~~l~~~~ 851 (1008)
++.+ .+..+++.++|+|+|++.+ +++....+.+.|++|.|+.++.+++.+++..|+|+|+|++...
T Consensus 343 LL~~------~~~~i~~~a~~aL~nl~~~-~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nl~~~~------- 408 (529)
T 3tpo_A 343 LLTN------PKTNIQKEATWTMSNITAG-RQDQIQQVVNHGLVPFLVGVLSKADFKTQKAAAWAITNYTSGG------- 408 (529)
T ss_dssp HTTC------SSHHHHHHHHHHHHHHHTS-CHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHS-------
T ss_pred HHCC------CCHHHHHHHHHHHHHHHCC-CHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC-------
T ss_conf 9809------9888989999999998616-3888889996583799999856999999999999999998189-------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHH-CCCC---CCHHHHHH
Q ss_conf 9998631148999876544685347443036743456078987205898136599999997532-0444---42146897
Q 001833 852 PKRKGFWCFSPPPEIGCQVHGGLCGIESSFCLLEANAVRPLVRVLEDPDHGACEASLDALVTLI-EGER---LQNGSKVL 927 (1008)
Q Consensus 852 ~~~~g~~~~~~~~~~~c~~h~~~c~~~~~~~l~~~g~i~~Lv~lL~~~d~~v~~~al~aL~~L~-~~~~---~~~~~~~i 927 (1008)
+.++...+++.|+|++|+++|...|+.++..++++|.+++ .++. .+.....|
T Consensus 409 ------------------------~~~~~~~l~~~g~i~~L~~LL~~~d~~i~~~~L~aL~nil~~~~~~~~~~~~~~~i 464 (529)
T 3tpo_A 409 ------------------------TVEQIVYLVHCGIIEPLMNLLSAKDTKIIQVILDAISNIFQAAEKLGETEKLSIMI 464 (529)
T ss_dssp ------------------------CHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHH
T ss_pred ------------------------CHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf ------------------------99999999989689999998669999999999999999999868626768999999
Q ss_pred HHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHH
Q ss_conf 8508369999982599957899999999998538477
Q 001833 928 EDANAIDRMVRFLSSPSPKLQEKALDSVERIFRLPEF 964 (1008)
Q Consensus 928 ~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~ 964 (1008)
.++||+++|..+..++|.+++++|..++++||..++-
T Consensus 465 ee~ggl~~ie~Lq~~~n~~i~~~A~~iie~yf~~~~~ 501 (529)
T 3tpo_A 465 EECGGLDKIEALQRHENESVYKASLNLIEKYFSVEEE 501 (529)
T ss_dssp HHTTCHHHHTGGGGCSSHHHHHHHHHHHHHHC-----
T ss_pred HHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCC
T ss_conf 9877499999987499999999999999997798543
Done!