BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001834
(1008 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O60177|YG42_SCHPO Uncharacterized ATP-dependent helicase C23E6.02
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC23E6.02 PE=3 SV=1
Length = 1040
Score = 355 bits (911), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 253/777 (32%), Positives = 384/777 (49%), Gaps = 141/777 (18%)
Query: 257 LNQPKVEATLPDGLLSVNLLKHQKIALAWMLQKETRSLHCLGGILADDQGLGKTISIIAL 316
+N P + P GL+ L++HQK L W+ + E S GGILADD GLGKT+ +AL
Sbjct: 373 VNDPTIREGTPAGLIPT-LMEHQKEGLMWLKRLEESSKK--GGILADDMGLGKTVQALAL 429
Query: 317 IQMQRSLQSKS-KTEVLGNQKTEALNLDDDDDNGNAGLDKVKETGESDDIKPVPEVSTST 375
+ + R +SKS KT ++ I PV
Sbjct: 430 L-VTRPPESKSVKTTLI--------------------------------ITPV------- 449
Query: 376 RSFSRRRPAAGTLVVCPASVLRQWARELEDKVPDKAALSVLIYHGGSRTKDPVE-LAKYD 434
S+L+QW E+ K+ +V I+HG S+ E L YD
Sbjct: 450 ------------------SLLQQWHNEILTKIAPSHRPTVYIHHGSSKKHKIAEQLMSYD 491
Query: 435 VVLTTYSIVTNEVPKQPSVDEEEADEKNGETYGLSSEFSVNKKRKKISNVSKRGKKGKKG 494
+VLTTY+++ E + + D+ D N KK ++
Sbjct: 492 IVLTTYNVIAYEFKNKMAYDKSIED---------------NAPIKKFEHL---------- 526
Query: 495 NVNSSIDYGCGPLAKVGWFRVVLDEAQTIKNHRTQVARACCSLRAKRRWCLSGTPIQNSI 554
P + W+RV+LDEAQTIKN T AR CC L + RWCLSGTP+QN +
Sbjct: 527 -----------PFFEAEWYRVILDEAQTIKNRNTLAARGCCLLESTYRWCLSGTPMQNGV 575
Query: 555 DDLYSYFRFLKYDPYAVYKSFYSTIKIPISR--NSLHGYKKLQAVLRAIMLRRTKGTFID 612
++ YS +FL+ PY+ + SF IP+S N+ K+ + +L+A++LRRTK T ID
Sbjct: 576 EEFYSLIKFLRIKPYSDWSSFSKDFTIPLSSNINTSAPMKRFRGLLKAVLLRRTKNTKID 635
Query: 613 GQPIINLPPKTISLTKVDFSKEEWAFYKKLESDSLKKFKAFADAGTVNQNYANILLMLLR 672
G+PI+ LPPKT ++ D S E FY L+S + + + + GT+ +Y ++L++LLR
Sbjct: 636 GKPILTLPPKTAVKSETDLSSSEMEFYNTLQSGAQIQMRKYLQEGTITTHYGSLLVLLLR 695
Query: 673 LRQACDHPLLV--KEYDFDSVGKISGEMAKRLPRDMLIDLLSRLETSSAI-CCVCSD-PP 728
LRQAC HP L+ +E D + + + + + ++RL+ + C +C D
Sbjct: 696 LRQACCHPWLIVAREAAVDDNDSFQAK-NRAIYNQIYPEAVNRLKLIETLQCSLCMDVVA 754
Query: 729 EDSVVTMCGHVFCYQCASEYITGDDNMCP-------APRCK--------EQLGADVVFSK 773
E ++ CGH C +C + IT ++M +P+C E+L + +F +
Sbjct: 755 ELLIIVPCGHFLCRECLTHVITSSEDMAKQTSNENISPKCSVCEEYIDTERLLSYALFRR 814
Query: 774 TTLKNCVSDDGGGSPTD--SPFADK--SGILDNEYISSKIRTVLDILHTQCELNTKCSIV 829
+ + D T+ S K S IL+N + KI T D H T + +
Sbjct: 815 YSGMAPIVDADNKLRTENISELLPKQYSNILENRQMGMKIFT--DPKHW-----TTSTKI 867
Query: 830 EIHDLAGSNGSSAVHSKSPIEGPIKSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLP 889
E N + K P + K ++FSQ+ L+L Q I+Y G +S
Sbjct: 868 E----KALNAVKEIIKKQPTD---KILIFSQFVSFLELFTVPFRQEGIKYLMYTGGLSTA 920
Query: 890 ARDRAVKDFNTDREQITVMLMSLKAGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRI 949
R++A+ +F D + V+L+SLKAGN+GLN+ A+HVI+LD +WNP E+QAVDRAHRI
Sbjct: 921 ERNQALINFEVD-PNVRVLLISLKAGNVGLNLTCANHVIILDPFWNPYIEEQAVDRAHRI 979
Query: 950 GQTRPVTVTRLTIRDTVEDRILKLQDDKRKMVASAFGEDQGGGTASRLTVEDLRYLF 1006
GQ +PV + R+ +T+E+R+L LQD KR+++ SA GE +G SRL ++L +LF
Sbjct: 980 GQDKPVNILRIVTNNTIEERVLALQDRKRELIDSALGE-KGLREISRLNTKELSFLF 1035
>sp|Q9FNI6|SM3L2_ARATH Putative SWI/SNF-related matrix-associated actin-dependent regulator
of chromatin subfamily A member 3-like 2 OS=Arabidopsis
thaliana GN=At5g22750 PE=2 SV=1
Length = 1029
Score = 355 bits (910), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 243/735 (33%), Positives = 367/735 (49%), Gaps = 146/735 (19%)
Query: 298 GGILADDQGLGKTISIIALIQMQRSLQSKSKTEVLGNQKTEALNLDDDDDNGNAGLDKVK 357
GGILAD GLGKT+ I+L+ + S ++ S + N + DKV
Sbjct: 414 GGILADAMGLGKTVMTISLL-LAHSWKAASTGFLCPNYEG----------------DKVI 456
Query: 358 ETGESDDIKPVPEVSTSTRSFSRRR-------PAAGTLVVCPASVLRQWARELEDKVPDK 410
+ DD+ P +T F +R G L+VCP ++L QW E+E
Sbjct: 457 SSS-VDDLTSPPVKATKFLGFDKRLLEQKSVLQNGGNLIVCPMTLLGQWKTEIEMHA-KP 514
Query: 411 AALSVLIYHGGSRTKDPVELAKYDVVLTTYSIVTNEVPKQPSVDEEEADEKNGETYGLSS 470
+LSV +++G SR KD L++ DVV+TTY ++T+E ++ S D E
Sbjct: 515 GSLSVYVHYGQSRPKDAKLLSQSDVVITTYGVLTSEFSQENSADHE-------------- 560
Query: 471 EFSVNKKRKKISNVSKRGKKGKKGNVNSSIDYGCGPLAKVGWFRVVLDEAQTIKNHRTQV 530
+ V WFR+VLDEA TIKN ++Q+
Sbjct: 561 -----------------------------------GIYAVRWFRIVLDEAHTIKNSKSQI 585
Query: 531 ARACCSLRAKRRWCLSGTPIQNSIDDLYSYFRFLKYDPYAVYKSFYSTIKIPISRNSLHG 590
+ A +L A RRWCL+GTPIQN+++DLYS RFL+ +P+ + + ++ P G
Sbjct: 586 SLAAAALVADRRWCLTGTPIQNNLEDLYSLLRFLRIEPWGTWAWWNKLVQKPFEEGDERG 645
Query: 591 YKKLQAVLRAIMLRRTK-GTFIDGQPIINLPPKTISLTKVDFSKEEWAFYKKLESDSLKK 649
K +Q++L+ IMLRRTK T +G+PI+ LPP + + S+ E FY L S K
Sbjct: 646 LKLVQSILKPIMLRRTKSSTDREGRPILVLPPADARVIYCELSESERDFYDALFKRSKVK 705
Query: 650 FKAFADAGTVNQNYANILLMLLRLRQACDHPLLV------KEY-DFDSV------GKISG 696
F F + G V NYA+IL +LLRLRQ CDHP LV EY D + + GK SG
Sbjct: 706 FDQFVEQGKVLHNYASILELLLRLRQCCDHPFLVMSRGDTAEYSDLNKLSKRFLSGKSSG 765
Query: 697 --EMAKRLPRDMLI-DLLSRL-ETSSAICCVCSDPPEDSVVTMCGHVFCYQC-ASEYITG 751
K +P + + +++ L + C +C + ED+V+T C H C +C + +
Sbjct: 766 LEREGKDVPSEAFVQEVVEELRKGEQGECPICLEALEDAVLTPCAHRLCRECLLASWRNS 825
Query: 752 DDNMCPAPRCKEQLGADVVFSKTTLKNCVSDDGGGSPTDSPFADKSGILDNEYISSKIRT 811
+CP C+ + + + +PT+S F + + N SSKI
Sbjct: 826 TSGLCPV--CRNTVSKQELIT--------------APTESRF--QVDVEKNWVESSKITA 867
Query: 812 VLDILHTQCELNTKCSIVEIHDLAGSNGSSAVHSKSPIEGPIKSIVFSQWTRMLDLVENS 871
+L+ +L G S + KSI+FSQWT LDL++
Sbjct: 868 LLE------------------ELEGLRSSGS-----------KSILFSQWTAFLDLLQIP 898
Query: 872 LNQHCIQYRRLDGTMSLPARDRAVKDFNTDREQITVMLMSLKAGNLGLNMVAASHVILLD 931
L+++ + RLDGT+S R++ +K+F+ D I V+LMSLKAG +G+N+ AAS+ ++D
Sbjct: 899 LSRNNFSFVRLDGTLSQQQREKVLKEFSED-GSILVLLMSLKAGGVGINLTAASNAFVMD 957
Query: 932 LWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRILKLQDDKRKMVASAFGEDQGG 991
WWNP E+QAV R HRIGQT+ V + R ++ TVE+R+ +Q K++M++ A DQ
Sbjct: 958 PWWNPAVEEQAVMRIHRIGQTKEVKIRRFIVKGTVEERMEAVQARKQRMISGAL-TDQEV 1016
Query: 992 GTASRLTVEDLRYLF 1006
+A +E+L+ LF
Sbjct: 1017 RSAR---IEELKMLF 1028
>sp|Q9FIY7|SM3L3_ARATH Putative SWI/SNF-related matrix-associated actin-dependent regulator
of chromatin subfamily A member 3-like 3 OS=Arabidopsis
thaliana GN=At5g43530 PE=3 SV=1
Length = 1277
Score = 350 bits (898), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 243/728 (33%), Positives = 359/728 (49%), Gaps = 152/728 (20%)
Query: 298 GGILADDQGLGKTISIIALIQMQRSLQSKSKTEVLGNQKTEALNLDDDDDNGNAGLDKVK 357
GGILAD GLGKT+ IALI + GN + E + + D NA K
Sbjct: 682 GGILADAMGLGKTVMTIALILARPGR---------GNPENEDVLVAD----VNADKRNRK 728
Query: 358 ETGESDDIKPVPEVSTSTRSFSRRRPAAGTLVVCPASVLRQWARELEDKV-PDKAALSVL 416
E + + + GTL++CP ++L QW ELE PD +SVL
Sbjct: 729 EIH---------------MALTTVKAKGGTLIICPMALLSQWKDELETHSKPD--TVSVL 771
Query: 417 IYHGGSRTKDPVELAKYDVVLTTYSIVTNEVPKQPSVDEEEADEKNGETYGLSSEFSVNK 476
+Y+GG RT D +A +DVVLTTY ++T+
Sbjct: 772 VYYGGDRTHDAKAIASHDVVLTTYGVLTS------------------------------- 800
Query: 477 KRKKISNVSKRGKKGKKGNVNSSIDYGCGPLAKVGWFRVVLDEAQTIKNHRTQVARACCS 536
K ++ +SI ++ W+R+VLDEA TIK+ +TQ A+A
Sbjct: 801 --------------AYKQDMANSI------FHRIDWYRIVLDEAHTIKSWKTQAAKATFE 840
Query: 537 LRAKRRWCLSGTPIQNSIDDLYSYFRFLKYDPYAVYKSFYSTIKIPISRNSLHGYKKLQA 596
L + RWCL+GTP+QN ++DLYS FL +P+ + + I+ P G K ++A
Sbjct: 841 LSSHCRWCLTGTPLQNKLEDLYSLLCFLHVEPWCNWAWWSKLIQKPYENGDPRGLKLIKA 900
Query: 597 VLRAIMLRRTKGTF-IDGQPIINLPPKTISLTKVDFSKEEWAFYKKLESDSLKKFKAFAD 655
+LR +MLRRTK T +G I+ LPP + + + + S+ E FY L S +F F
Sbjct: 901 ILRPLMLRRTKETRDKEGSLILELPPTDVQVIECEQSEAERDFYTALFKRSKVQFDQFVA 960
Query: 656 AGTVNQNYANILLMLLRLRQACDHPLLV------KEY-DFDSVGK---------ISGEMA 699
G V NYANIL +LLRLRQ C+HP LV ++Y D DS+ + +S
Sbjct: 961 QGKVLHNYANILELLLRLRQCCNHPFLVMSRADSQQYADLDSLARRFLDNNPDSVSQNAP 1020
Query: 700 KRLPRDMLIDLLSRLETSSAICCVCSDPPEDSVVTMCGHVFCYQC-ASEYITGDDNMCPA 758
R + +I L + +S C +C + +D V+T C H C +C + + + +CP
Sbjct: 1021 SRAYIEEVIQDLR--DGNSKECPICLESADDPVLTPCAHRMCRECLLTSWRSPSCGLCPI 1078
Query: 759 PRCKEQLGADVVFSKTTLKNCVSDDGGGSPTDSPFADKSGILDNEYISSKIRTVLDILHT 818
R + +T L +C PTDS F + ++ N SSK+ +L L
Sbjct: 1079 CR--------TILKRTELISC--------PTDSIF--RVDVVKNWKESSKVSELLKCLEK 1120
Query: 819 QCELNTKCSIVEIHDLAGSNGSSAVHSKSPIEGPIKSIVFSQWTRMLDLVENSLNQHCIQ 878
+GS KSIVFSQWT LDL+E L + +
Sbjct: 1121 ----------------IKKSGSGE-----------KSIVFSQWTSFLDLLEIPLRRRGFE 1153
Query: 879 YRRLDGTMSLPARDRAVKDFNTDREQITVMLMSLKAGNLGLNMVAASHVILLDLWWNPTT 938
+ R DG ++ R++ +K+FN + +Q T++LMSLKAG +GLN+ AAS V L+D WWNP
Sbjct: 1154 FLRFDGKLAQKGREKVLKEFN-ETKQKTILLMSLKAGGVGLNLTAASSVFLMDPWWNPAV 1212
Query: 939 EDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRILKLQDDKRKMVASAFGEDQGGGTASRLT 998
E+QA+ R HRIGQ R V V R ++DTVE+R+ ++Q K++M+A A +++ ++RL
Sbjct: 1213 EEQAIMRIHRIGQKRTVFVRRFIVKDTVEERMQQVQARKQRMIAGALTDEE--VRSARL- 1269
Query: 999 VEDLRYLF 1006
E+L+ LF
Sbjct: 1270 -EELKMLF 1276
>sp|O13762|YF2C_SCHPO Uncharacterized ATP-dependent helicase C17A2.12
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC17A2.12 PE=3 SV=1
Length = 897
Score = 329 bits (844), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 246/777 (31%), Positives = 357/777 (45%), Gaps = 147/777 (18%)
Query: 259 QPKVEATLPDGLLSVNLLKHQKIALAWMLQKETRSLHCLGGILADDQGLGKTISIIALIQ 318
Q K E GLL V+LL HQ AWM E S C GG++ADD GLGKTI IAL
Sbjct: 235 QLKNEQVQSAGLL-VSLLPHQVEGHAWMESMEQSS-KC-GGVMADDMGLGKTIQTIAL-- 289
Query: 319 MQRSLQSKSKTEVLGNQKTEALNLDDDDDNGNAGLDKVKETGESDDIKPVPEVSTSTRSF 378
L QK++ D +++T
Sbjct: 290 -------------LLTQKSQ---------------DPLRKTN------------------ 303
Query: 379 SRRRPAAGTLVVCPASVLRQWARELEDKVPDKAALSVLIYHGGSRTK-DPVELAKYDVVL 437
L+V ++L QWA EL KV LSV I+HG ++ D EL++YDVVL
Sbjct: 304 ---------LIVVSVALLHQWAEELSTKVHPSKKLSVYIHHGSTKKNLDSYELSQYDVVL 354
Query: 438 TTYSIVTNEVPKQPSVDEEEADEKNGETYGLSSEFSVNKKRKKISNVSKRGKKGKKGNVN 497
TTYS++ E+ K+ N
Sbjct: 355 TTYSMLAYEM--------------------------------------KQNDAFNNNNPA 376
Query: 498 SSIDYGCGPLAKVGWFRVVLDEAQTIKNHRTQVARACCSLRAKRRWCLSGTPIQNSIDDL 557
++ L + W+R+VLDEA TI+N T A+ C L AK RWCLSGTPIQN ID+
Sbjct: 377 TATPPPACSLLETSWYRIVLDEAHTIRNRDTLAAKCCVKLDAKYRWCLSGTPIQNHIDEF 436
Query: 558 YSYFRFLKYDPYAVYKSFYSTIKIPISRNSLH----GYKKLQAVLRAIMLRRTKGTFIDG 613
YS +FL+ PY V+ F I P+ K+L+ +L + + RRTK T ++
Sbjct: 437 YSLLKFLRIKPYCVWSLFAKDISRPLKSYRADIVEAALKRLRILLASTVFRRTKETRVNN 496
Query: 614 QPIINLPPKTISLTKVDFSKEEWAFYKKLESDSLKKFKAFADAGTVNQNYANILLMLLRL 673
PI+NLPPKTI V+ EE A Y + S + + + Y +L+ LLRL
Sbjct: 497 LPIVNLPPKTIRTVSVNLLPEERALYNEQMSSAQSLVDNYFNNDHDLSRYGFLLVSLLRL 556
Query: 674 RQACDHPLLVKEYDFDSVGKI-SGEMAKRLPRDMLIDLLSRLETSSAI-CCVCSDPPEDS 731
RQ C HP LVK D+ +I E + + + + R+ T C VC DP
Sbjct: 557 RQFCCHPWLVKSSSLDNSFRIRDSENVRNACKSLDPLTIERIATLQDFNCSVCLDPCLAP 616
Query: 732 VVTM-CGHVFCYQCASEYI-------TGDDNMCPAPRCKEQLGADVVFSKTTLKNCVSDD 783
V + CGH C +C S + + + P C+ + D + T L+
Sbjct: 617 VFIIPCGHFTCQECMSMLVGQKYGSSSTSTIIAKCPMCRGNIVQDSLVDATILQ------ 670
Query: 784 GGGSPTDS----PFADKSGILDNEYISSKIRTVLDILHTQ------CELNTKCSIVE--- 830
P +S + E I + +D + T+ E + + +
Sbjct: 671 AIHGPLNSLKQLELDMNQSFSEQESIKLRWENRIDQMFTKKFGKRASEWKSSSKLNQARQ 730
Query: 831 -IHDLAGSNGSSAVHSKSPIEGPIKSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLP 889
I D+ GS + + +V+SQ+++ L LV + L I++ R DGTMS
Sbjct: 731 TILDIIGSKRNEKI------------LVYSQFSQYLCLVSHMLKLENIRHVRYDGTMSAN 778
Query: 890 ARDRAVKDFNTDREQITVMLMSLKAGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRI 949
R +++ FN D++ + VML+SLKAG++GLN+ A+HVIL + ++NP+ EDQA+DR HR+
Sbjct: 779 QRQKSLHSFNNDKD-VLVMLVSLKAGSVGLNLTIANHVILQEPFYNPSIEDQAIDRVHRL 837
Query: 950 GQTRPVTVTRLTIRDTVEDRILKLQDDKRKMVASAFGEDQGGGTASRLTVEDLRYLF 1006
GQ +PVTV R +DT+E+RI+ +Q KR++V A ++ SRL E+L YLF
Sbjct: 838 GQQKPVTVYRFITKDTIEERIVSVQRKKRQLVKEALDSNENNP-LSRLDKEELLYLF 893
>sp|Q9FF61|SM3L1_ARATH Putative SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 3-like 1
OS=Arabidopsis thaliana GN=At5g05130 PE=2 SV=1
Length = 881
Score = 315 bits (807), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 240/803 (29%), Positives = 362/803 (45%), Gaps = 144/803 (17%)
Query: 218 SVSMTQFGGPSDLAYRS--GSADERAVGGDERLIYQAALEDLNQPKVEATLPDGLLSVNL 275
S S T FG + + G+ D+R+V +L+ + L V A P ++ L
Sbjct: 174 SESDTSFGLSEAVVVKEQMGNGDKRSVDKIFKLVDENV--KLMGKLVAAEPPREVIKSEL 231
Query: 276 LKHQKIALAWMLQKETRS-------------LHCL-------------GGILADDQGLGK 309
HQK L W+L +E L+ L GG+ ADD GLGK
Sbjct: 232 FAHQKEGLGWLLHREKSGELPPFWEEKDGEFLNTLTNYRSDKRPDPLRGGVFADDMGLGK 291
Query: 310 TISIIALIQMQRSLQSKSKTEVLGNQKTEALNLDDDDDNGNAGLDKVKETGESDDIKPVP 369
T+++++LI R + + T E L+ + D ++ ES K +
Sbjct: 292 TLTLLSLIAFDRYGNASTSTPT-----EEPLDGEGDKIEKKGKKRGRGKSSESVTRKKLK 346
Query: 370 EVSTSTRSFSRRRPAAGTLVVCPASVLRQWARELEDK-VPDKAALSVLIYHGGSRTKDPV 428
+ S++ TL+VCP SV+ W +LE+ VP L V +YHGG RT D
Sbjct: 347 TDDVVGMNVSQK----TTLIVCPPSVISAWITQLEEHTVP--GILKVYMYHGGERTDDVN 400
Query: 429 ELAKYDVVLTTYSIVTNEVPKQPSVDEEEADEKNGETYGLSSEFSVNKKRKKISNVSKRG 488
EL KYD+VLTTY + +V+E D
Sbjct: 401 ELMKYDIVLTTYGTL--------AVEESWED----------------------------- 423
Query: 489 KKGKKGNVNSSIDYGCGPLAKVGWFRVVLDEAQTIKNHRTQVARACCSLRAKRRWCLSGT 548
P+ K+ W R++LDEA TIKN Q +R C L+A RRW ++GT
Sbjct: 424 ----------------SPVKKMEWLRIILDEAHTIKNANAQQSRVVCKLKASRRWAVTGT 467
Query: 549 PIQNSIDDLYSYFRFLKYDPYAVYKSFYSTIKIPISRNSLHGYKKLQAVLRAIMLRRTKG 608
PIQN DLYS FL+++P+++ + S I+ P+ + + G +LQ ++ I LRRTK
Sbjct: 468 PIQNGSFDLYSLMAFLRFEPFSIKSYWQSLIQRPLGQGNKKGLSRLQVLMATISLRRTK- 526
Query: 609 TFIDGQPIINLPPKTISLTKVDFSKEEWAFYKKLESDSLKKFKAFADAGTVNQNYANILL 668
+ +I LPPKT+ V+ S EE Y +E ++ + + G++ +NY+ +L
Sbjct: 527 ----EKSLIGLPPKTVETCYVELSPEERQLYDHMEGEAKGVVQNLINNGSLMRNYSTVLS 582
Query: 669 MLLRLRQACDHPLLVKEYDFDSVGKISGEMAKRLPRDMLIDLLSRLETSSAI-CCVCSDP 727
++LRLRQ CD L S E P ++L L++ L+ C +C P
Sbjct: 583 IILRLRQLCDDMSLCPPELRSFTTSTSVEDVTDKP-ELLQKLVAALQDGEDFDCPICISP 641
Query: 728 PEDSVVTMCGHVFCYQCASEYITGDDNMCPAPRCKEQLGADVVFSKTTLKNCVSDDGGGS 787
P + ++T C H+FC C + + +CP C+ L +++ L N S
Sbjct: 642 PTNIIITRCAHIFCRACILQTLQRSKPLCPL--CRGSL------TQSDLYNAPPPPPDSS 693
Query: 788 PTDSPFADKSGILDNEYISSKIRTVLDILHTQCELNTKCSIVEIHDLAGSNGSSAVHSKS 847
TD A S SSK+ +L +L + N N S V
Sbjct: 694 NTDGEDAKSS------TKSSKVSALLSLLMASRQEN-------------PNTKSVV---- 730
Query: 848 PIEGPIKSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDF-NTDREQIT 906
FSQ+ +ML L+E L RLDG M++ R + + +F N +
Sbjct: 731 ----------FSQFRKMLLLLETPLKAAGFTILRLDGAMTVKKRTQVIGEFGNPELTGPV 780
Query: 907 VMLMSLKAGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTV 966
V+L SLKA G+N+ AAS V L D WWNP E+QA+DR HRIGQ + V + R+ R+++
Sbjct: 781 VLLASLKASGTGINLTAASRVYLFDPWWNPAVEEQAMDRIHRIGQKQEVKMIRMIARNSI 840
Query: 967 EDRILKLQDDKRKMVASAFGEDQ 989
E+R+L+LQ K+ + AF Q
Sbjct: 841 EERVLELQQKKKNLANEAFKRRQ 863
>sp|Q14527|HLTF_HUMAN Helicase-like transcription factor OS=Homo sapiens GN=HLTF PE=1
SV=2
Length = 1009
Score = 314 bits (804), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 198/621 (31%), Positives = 301/621 (48%), Gaps = 102/621 (16%)
Query: 371 VSTSTRSFSRRRPAAGTLVVCPASVLRQWARELEDKVPDKAALSVLIYHGGSRTKDPVEL 430
V S ++ RP TL++CP SVL W + + L+ +Y+G R ++P L
Sbjct: 463 VEGSKKTDVEERPRT-TLIICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRIREPALL 521
Query: 431 AKYDVVLTTYSIVTNEVPKQPSVDEEEADEKNGETYGLSSEFSVNKKRKKISNVSKRGKK 490
+K D+VLTTY+I+T++
Sbjct: 522 SKQDIVLTTYNILTHDY------------------------------------------- 538
Query: 491 GKKGNVNSSIDYGCGPLAKVGWFRVVLDEAQTIKNHRTQVARACCSLRAKRRWCLSGTPI 550
G KG+ PL + W RV+LDE I+N Q +A L ++RRW L+GTPI
Sbjct: 539 GTKGD---------SPLHSIRWLRVILDEGHAIRNPNAQQTKAVLDLESERRWVLTGTPI 589
Query: 551 QNSIDDLYSYFRFLKYDPYAVYKSFYSTIKIPISRNSLHGYKKLQAVLRAIMLRRTKGTF 610
QNS+ DL+S FLK P+ + ++ TI+ P++ G ++LQ++++ I LRRTK +
Sbjct: 590 QNSLKDLWSLLSFLKLKPFIDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKTSK 649
Query: 611 IDGQPIINLPPKTISLTKVDFSKEEWAFYKKLESDSLKKFKAFADAGTVNQNYANILLML 670
I G+P++ LP + + + + S EE Y+ ++++ + + GTV +YA++L +L
Sbjct: 650 IKGKPVLELPERKVFIQHITLSDEERKIYQSVKNEGRATIGRYFNEGTVLAHYADVLGLL 709
Query: 671 LRLRQACDHPLLVKEY---DFDSVGKISGEMAKRLPRDMLIDLLSRLETSSAICCVCSDP 727
LRLRQ C H L+ + S E+ K+L R M + L S S C +C D
Sbjct: 710 LRLRQICCHTYLLTNAVSSNGPSGNDTPEELRKKLIRKMKLILSS---GSDEECAICLDS 766
Query: 728 PEDSVVTMCGHVFCYQCASEYITGDDNMCPAPRCKEQLGADVVFSKTTLKNCVSDDGGGS 787
V+T C HVFC C + I + P C+ + D L C
Sbjct: 767 LTVPVITHCAHVFCKPCICQVIQNEQPHAKCPLCRNDIHED------NLLEC-------- 812
Query: 788 PTDSPFADKSGILDNEYI-SSKIRTVLDILHTQCELNTKCSIVEIHDLAGSNGSSAVHSK 846
P + D D E+ SSKI ++ L DL N +
Sbjct: 813 PPEELARDSEKKSDMEWTSSSKINALMHAL---------------TDLRKKNPN------ 851
Query: 847 SPIEGPIKSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDF-NTDREQI 905
IKS+V SQ+T L L+E L + RLDG+M+ R +++ F NT+
Sbjct: 852 ------IKSLVVSQFTTFLSLIEIPLKASGFVFTRLDGSMAQKKRVESIQCFQNTEAGSP 905
Query: 906 TVMLMSLKAGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDT 965
T+ML+SLKAG +GLN+ AAS V L+D WNP EDQ DR HR+GQ + V +T+ ++D+
Sbjct: 906 TIMLLSLKAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDS 965
Query: 966 VEDRILKLQDDKRKMVASAFG 986
VE+ +LK+Q+ KR++ A AFG
Sbjct: 966 VEENMLKIQNKKRELAAGAFG 986
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 27/95 (28%)
Query: 250 YQAALEDLNQP-KVEATLPDGLLSVNLLKHQKIALAWMLQKET----------------- 291
+ EDL + K P + LL HQK ALAWM+ +E
Sbjct: 214 FDKLFEDLKEDDKTHEMEPAEAIETPLLPHQKQALAWMVSRENSKELPPFWEQRNDLYYN 273
Query: 292 ---------RSLHCLGGILADDQGLGKTISIIALI 317
R + GGILADD GLGKT++ IA+I
Sbjct: 274 TITNFSEKDRPENVHGGILADDMGLGKTLTAIAVI 308
>sp|Q95216|HLTF_RABIT Helicase-like transcription factor OS=Oryctolagus cuniculus GN=HLTF
PE=1 SV=1
Length = 1005
Score = 312 bits (800), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 193/626 (30%), Positives = 302/626 (48%), Gaps = 103/626 (16%)
Query: 387 TLVVCPASVLRQWARELEDKVPDKAALSVLIYHGGSRTKDPVELAKYDVVLTTYSIVTNE 446
TL++CP SVL W + + L+ +Y+G R +DP L+K D+VLTTY+I+T++
Sbjct: 475 TLIICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRIRDPALLSKQDIVLTTYNILTHD 534
Query: 447 VPKQPSVDEEEADEKNGETYGLSSEFSVNKKRKKISNVSKRGKKGKKGNVNSSIDYGCGP 506
G KG+ P
Sbjct: 535 Y-------------------------------------------GTKGD---------SP 542
Query: 507 LAKVGWFRVVLDEAQTIKNHRTQVARACCSLRAKRRWCLSGTPIQNSIDDLYSYFRFLKY 566
L + W RV+LDE I+N Q +A L A+RRW L+GTPIQNS+ DL+S FLK
Sbjct: 543 LHSIRWLRVILDEGHAIRNPNAQQTKAVLDLEAERRWVLTGTPIQNSLKDLWSLLSFLKL 602
Query: 567 DPYAVYKSFYSTIKIPISRNSLHGYKKLQAVLRAIMLRRTKGTFIDGQPIINLPPKTISL 626
P+ + ++ TI+ P++ G ++LQ++++ I LRRTK + I G+P++ LP + + +
Sbjct: 603 KPFVDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKTSKIKGKPVLELPERPVFI 662
Query: 627 TKVDFSKEEWAFYKKLESDSLKKFKAFADAGTVNQNYANILLMLLRLRQACDHPLLVKEY 686
+ S EE Y+ ++S+ + + GTV +YA++L +LLRLRQ C H L+
Sbjct: 663 QHITLSDEERKIYQSVKSEGKATIGRYFNEGTVLAHYADVLGLLLRLRQICCHTHLLT-- 720
Query: 687 DFDSVGKISGEMAKRLPRDMLIDLLSRLET-----SSAICCVCSDPPEDSVVTMCGHVFC 741
++V SG P ++ L+ +++ S C +C D V+T C HVFC
Sbjct: 721 --NTVSS-SGPSGNDTPEELRKKLIKKMKLILSSGSDEECAICLDSLTVPVITHCAHVFC 777
Query: 742 YQCASEYITGDDNMCPAPRCKEQLGADVVFSKTTLKNCVSDDGGGSPTDSPFADKSGILD 801
C + I + P C+ + D L C P + D +
Sbjct: 778 KPCICQCIQNEQPHAKCPLCRNDIHGD------NLLEC--------PPEELACDSEKKSN 823
Query: 802 NEYISSKIRTVLDILHTQCELNTKCSIVEIHDLAGSNGSSAVHSKSPIEGPIKSIVFSQW 861
E+ SS + ++H +L TK IKS+V SQ+
Sbjct: 824 MEWTSSS--KINALMHALIDLRTK------------------------NPNIKSLVVSQF 857
Query: 862 TRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDF-NTDREQITVMLMSLKAGNLGLN 920
T L L+E L + RLDG+M+ R +++ F NT+ T+ML+SLKAG +GLN
Sbjct: 858 TTFLSLIETPLKASGFVFTRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSLKAGGVGLN 917
Query: 921 MVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRILKLQDDKRKM 980
+ AAS V L+D WNP EDQ DR HR+GQ + V +T+ ++D+VE+ +LK+Q+ KR++
Sbjct: 918 LCAASRVFLMDPAWNPAAEDQRFDRCHRLGQKQEVIITKFIVKDSVEENMLKIQNTKREL 977
Query: 981 VASAFGEDQGGGTASRLTVEDLRYLF 1006
A AFG + + + ++R L
Sbjct: 978 AAGAFGTKKNANEMKQAKINEIRTLI 1003
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 44/95 (46%), Gaps = 27/95 (28%)
Query: 250 YQAALEDLNQP-KVEATLPDGLLSVNLLKHQKIALAWMLQKE-TRSL------------- 294
+ EDL + K + P + LL HQK ALAWM+ +E +R L
Sbjct: 214 FDKLFEDLKEDDKTQEMEPAEAVETPLLPHQKQALAWMVSRENSRELPPFWELRNDLYYN 273
Query: 295 ------------HCLGGILADDQGLGKTISIIALI 317
+ GGILADD GLGKT++ IA+I
Sbjct: 274 TITNFSEKDQPENVHGGILADDMGLGKTLTAIAVI 308
>sp|P31244|RAD16_YEAST DNA repair protein RAD16 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RAD16 PE=1 SV=1
Length = 790
Score = 312 bits (800), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 216/664 (32%), Positives = 314/664 (47%), Gaps = 152/664 (22%)
Query: 387 TLVVCPASVLRQWARELEDKVPDKAALSVLIYHGGSRTKDPVELAKYDVVLTTYSIVTNE 446
+LVV P L QW E+E K L + IYHG SRT D +L YDVVLTTY+++ +
Sbjct: 233 SLVVAPTVALMQWKNEIEQHT--KGQLKIYIYHGASRTTDIKDLQGYDVVLTTYAVLESV 290
Query: 447 VPKQPSVDEEEADEKNGETYGLSSEFSVNKKRKKISNVSKRGKKG--KKGNVNSSIDYGC 504
KQ YG R K G K+ +V +ID+
Sbjct: 291 FRKQ--------------NYGF------------------RRKNGLFKQPSVLHNIDF-- 316
Query: 505 GPLAKVGWFRVVLDEAQTIKNHRTQVARACCSLRAKRRWCLSGTPIQNSIDDLYSYFRFL 564
+RV+LDEA IK+ ++ ARA +L+ ++RWCLSGTP+QN I ++YS RFL
Sbjct: 317 --------YRVILDEAHNIKDRQSNTARAVNNLKTQKRWCLSGTPLQNRIGEMYSLIRFL 368
Query: 565 KYDPYAVY------------------------------KSFYSTI------KIPISRNSL 588
+P+ Y +F++ K + L
Sbjct: 369 NINPFTKYFCTKCDCASKDWKFTDRMHCDHCSHVIMQHTNFFNHFMLKNIQKFGVEGPGL 428
Query: 589 HGYKKLQAVLRAIMLRRTKGTFIDGQPIINLPPKTISLTKVDFSKEEWAFYKKLESDSLK 648
+ +Q +L+ IMLRRTK D + LPP+ +++ + F++EE Y+ L +DS +
Sbjct: 429 ESFNNIQTLLKNIMLRRTKVERADD---LGLPPRIVTVRRDFFNEEEKDLYRSLYTDSKR 485
Query: 649 KFKAFADAGTVNQNYANILLMLLRLRQACDHPLLVKEYDFDSVGKISGEMAKRL---PRD 705
K+ +F + G V NYANI ++ R+RQ DHP LV KRL P D
Sbjct: 486 KYNSFVEEGVVLNNYANIFTLITRMRQLADHPDLV---------------LKRLNNFPGD 530
Query: 706 MLIDLLSRLETSSAICCVCSDPPEDSVVTMCGHVFCYQCASEYITG---DDNMCPAPRCK 762
+ IC +C+D E+ + + C H FC C EY+ ++N P C
Sbjct: 531 ---------DIGVVICQLCNDEAEEPIESKCHHKFCRLCIKEYVESFMENNNKLTCPVC- 580
Query: 763 EQLGADVVFSKTTLKNCVSDDGGGSPTDSPFADKSGILDNEYISSKIRTVLDILHTQCEL 822
+G + S+ L+ D K I+ +S K ++ I
Sbjct: 581 -HIGLSIDLSQPALE-----------VDLDSFKKQSIVSRLNMSGKWQSSTKI------- 621
Query: 823 NTKCSIVEIHDLAGSNGSSAVHSKSPIEGPIKSIVFSQWTRMLDLVENSLNQHCIQYRRL 882
+ + E++ L + + IKSIVFSQ+T MLDLVE L + Q +L
Sbjct: 622 --EALVEELYKLRSNKRT------------IKSIVFSQFTSMLDLVEWRLKRAGFQTVKL 667
Query: 883 DGTMSLPARDRAVKDFNTDREQITVMLMSLKAGNLGLNMVAASHVILLDLWWNPTTEDQA 942
G+MS RD +K F + Q V L+SLKAG + LN+ AS V +LD WWNP+ E Q+
Sbjct: 668 QGSMSPTQRDETIKYF-MNNIQCEVFLVSLKAGGVALNLCEASQVFILDPWWNPSVEWQS 726
Query: 943 VDRAHRIGQTRPVTVTRLTIRDTVEDRILKLQDDKRKMVASAFGEDQGGGTASRLTVEDL 1002
DR HRIGQ RPV +TR I D++E RI++LQ+ K M+ + +D+ SRLT DL
Sbjct: 727 GDRVHRIGQYRPVKITRFCIEDSIEARIIELQEKKANMIHATINQDEAA--ISRLTPADL 784
Query: 1003 RYLF 1006
++LF
Sbjct: 785 QFLF 788
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 3/51 (5%)
Query: 267 PDGLLSVNLLKHQKIALAWMLQKETRSLHCLGGILADDQGLGKTISIIALI 317
PDG+ ++ LL Q L W++ +E S++ GG+LAD+ G+GKTI IAL+
Sbjct: 177 PDGM-TIKLLPFQLEGLHWLISQE-ESIYA-GGVLADEMGMGKTIQTIALL 224
>sp|Q08562|ULS1_YEAST ATP-dependent helicase ULS1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=ULS1 PE=1 SV=1
Length = 1619
Score = 309 bits (791), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 247/791 (31%), Positives = 372/791 (47%), Gaps = 168/791 (21%)
Query: 251 QAALEDLNQPKV----EATLPDGLLSVNLLKHQKIALAWMLQKETRSLHCLGGILADDQG 306
+A LE++ Q + EA P+ + +VNLLKHQ++ L W+LQ E + GG+LADD G
Sbjct: 916 RALLENVKQSESIIDGEALTPEDM-TVNLLKHQRLGLHWLLQVENSAKK--GGLLADDMG 972
Query: 307 LGKTISIIALIQMQRSLQSKSKTEVLGNQKTEALNLDDDDDNGNAGLDKVKETGESDDIK 366
LGKTI IAL+ RS +SK KT ++ +
Sbjct: 973 LGKTIQAIALMLANRSEESKCKTNLI--------------------------------VA 1000
Query: 367 PVPEVSTSTRSFSRRRPAAGTLVVCPASVLRQWARELEDKVPDKAALSVLIY--HGGSRT 424
PV SVLR W ELE KV +A + I+ G +
Sbjct: 1001 PV-------------------------SVLRVWKGELETKVKKRAKFTTFIFGGSGNGKV 1035
Query: 425 KDPVELAKYDVVLTTYSIVTNEVPKQ-PSVDEEEADEKNGETYGLSSEFSVNKKRKKISN 483
K +LA+YD VL +Y + NE K P ++ D + + + ++N R K SN
Sbjct: 1036 KHWRDLARYDAVLVSYQTLANEFKKHWP----KKLDGEQNQLPAVPHIQALN--RLKTSN 1089
Query: 484 VSKRGKKGKKGNVNSSIDYGCGPLAKVGWFRVVLDEAQTIKNHRTQVARACCSLRAKRRW 543
Y ++R++LDE Q IKN T+ ++ACC++ RW
Sbjct: 1090 EY----------------YSPFFCNDSTFYRILLDEGQNIKNKNTRASKACCTINGMYRW 1133
Query: 544 CLSGTPIQNSIDDLYSYFRFLKYDPYAVYKSFYSTIKIPISRNSLHGY---------KKL 594
LSGTPIQNS+D+LYS RFL+ PY + F I RN + Y +K+
Sbjct: 1134 VLSGTPIQNSMDELYSLIRFLRIPPYHKEQRFKLDIGRFFQRNKQYQYDNEDRKNALRKV 1193
Query: 595 QAVLRAIMLRRTKGTFIDGQPIINLPPKTISLTKVDFSKEEWAFYKKLESDSLKKFKAFA 654
+ +L AIMLRR+K IDG+P++ LPPK + + + EE FY LES + K
Sbjct: 1194 RVLLNAIMLRRSKADKIDGKPLLELPPKIVEVDESRLKGEELKFYTALESKNQALAKKLL 1253
Query: 655 DAGTVNQNYANILLMLLRLRQACDHPLLV---------------KEYDFD------SVGK 693
+ T +Y+++L +LLRLRQAC H LV K ++ D +
Sbjct: 1254 NNSTRG-SYSSVLTLLLRLRQACCHSELVVMGEKKAEGTKVANGKSFEDDWLRLYYKITH 1312
Query: 694 ISGEMAKRLPRDMLIDLLSRLETSSAICCVCS---DPPEDSVVTMCGHVFCYQCASEYIT 750
+SGE ++ M +S C C +P SV+T CGH+ C C +I
Sbjct: 1313 MSGEAQAQVITSM----------NSMTCFWCMEQLEPEAMSVLTGCGHLICDTCIEPFIE 1362
Query: 751 GDDNMCPAPRCKEQLGADVVFSK-----TTLKNCVSDDGGGSPTDSPFADKSGILDNEYI 805
+ +M P + K + GA + K T K+ VS + F ++ L EY+
Sbjct: 1363 -ESSMLPQAK-KTKGGAFAIPCKDCQRLTNEKDIVSHKLYDQVINQGFTEED--LHAEYL 1418
Query: 806 SS----KIRTV------LDILHTQCELNTKCSIVEIHDLAGSNGSSAVHSKSPIEGPIKS 855
S KI+ + L ++ +++ V +S E K
Sbjct: 1419 SEMEKQKIQQKNVYVPNFESLEPSTKIEQCIQVIQ-----------RVFDESATE---KI 1464
Query: 856 IVFSQWTRMLDLVENSL-NQHCIQYRRLDGTMSLPARDRAVKDFNTDREQITVMLMSLKA 914
I+FSQ+T +++E+ L N+ Y + G+M+ R + +F D E+ ++L+S+KA
Sbjct: 1465 IIFSQFTTFFEILEHFLKNKLNFPYLKYIGSMNAQRRSDVINEFYRDPEK-RILLISMKA 1523
Query: 915 GNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRILKLQ 974
GN GL + A+HV+++D +WNP E+QA DR +RI QT+ V V +L I+D+VEDRI +LQ
Sbjct: 1524 GNSGLTLTCANHVVIVDPFWNPYVEEQAQDRCYRISQTKKVQVHKLFIKDSVEDRISELQ 1583
Query: 975 DDKRKMVASAF 985
K++MV SA
Sbjct: 1584 KRKKEMVDSAM 1594
>sp|Q10332|YBMA_SCHPO Uncharacterized ATP-dependent helicase C582.10c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC582.10c PE=1 SV=1
Length = 830
Score = 309 bits (791), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 231/758 (30%), Positives = 344/758 (45%), Gaps = 184/758 (24%)
Query: 271 LSVNLLKHQKIALAWMLQKETRSLHCL-GGILADDQGLGKTISIIALIQMQRSLQSKSKT 329
+ + LL HQ L W+ +ET S GGILADD GLGKTI +IALI
Sbjct: 229 MHIRLLDHQVQGLTWLKSRETVSKSSASGGILADDMGLGKTIQMIALILSH--------- 279
Query: 330 EVLGNQKTEALNLDDDDDNGNAGLDKVKETGESDDIKPVPEVSTSTRSFSRRRPAAGTLV 389
P+P+ S +S TLV
Sbjct: 280 -------------------------------------PLPKKKHSIKS---------TLV 293
Query: 390 VCPASVLRQWARELEDKVPDKAALSVLIYHGGSRTKDPVELAKYDVVLTTYSIVTNEVPK 449
V P S+++QW E +V K+ L+ ++YHG SR K + +YDVV+TTY I+ +E
Sbjct: 294 VAPLSLIKQW----ESEVQTKSKLTAIVYHGASRYKLLKVIHEYDVVITTYQILVSEWVS 349
Query: 450 QPSVDEEEADEKNGETYGLSSEFSVNKKRKKISNVSKRGKKGKKGNVNSSIDYGCGPLAK 509
+ G GK S + L
Sbjct: 350 HNTT----------------------------------GTDGKSPTEAKSYEKKKPSLFA 375
Query: 510 VGWFRVVLDEAQTIKNHRTQVARACCSLRAKRRWCLSGTPIQNSIDDLYSYFRFLKYDPY 569
W+R++LDEA TIKN ++ A ACC+L+ RWCL+GTP+QN++D+LYS +FL +P+
Sbjct: 376 FYWWRIILDEAHTIKNKSSKSALACCALQGINRWCLTGTPLQNNVDELYSLVKFLHINPF 435
Query: 570 AVYKSFYSTIKIPISRNSLH-GYKKLQAVLRAIMLRRTKGTFIDGQP-------IINLPP 621
+ I +P+ + + +K+L+ +L IMLRRTK T ++ + L
Sbjct: 436 NDQSVWKDQISLPLCQGEENLVFKRLRMLLSVIMLRRTK-TLLEANAGKDGTGGALKLSK 494
Query: 622 KTISLTKVDFSKEEWAFYKKLESDSLKKFKAFADAGTVNQNYANILLMLLRLRQACDHPL 681
+ + F + E FY L + + F ++G + +NY NIL +LLRLRQAC+HP
Sbjct: 495 RLVYKVICKFEESERDFYSNLARNMERTMSNFVNSGKLGKNYTNILCLLLRLRQACNHPQ 554
Query: 682 LVK---EYDFDSVGKISG-----EMAKRLPRDMLIDLLSRLETSS---AICCVC-SDPPE 729
+ E D D+ + G ++A D L +LL +E S + C +C ++ P
Sbjct: 555 SLNFQFEQDVDAFNALDGAANTNKLASDQDVDDLANLLETVEIGSRKKSFCTICMAELPP 614
Query: 730 DSVVTMCGHVFCYQCASEYITGDDNMCPAPRCKEQLGADVVFSKTTLKNCVSDDGGGSPT 789
D C C+ + KE D G P
Sbjct: 615 D-----FHEKKCKDCSRNF-------------KEL-----------------DKGIQDPN 639
Query: 790 DSPFADKSGILDNEYISSKIRTVLDILHTQCELNTKCSIVEIHDLAGSNGSSAVHSKSPI 849
D Y SSKIR +L IL S+ E + +
Sbjct: 640 DKTL----------YKSSKIREILKIL----------SLDEQEE------------DDTV 667
Query: 850 EGPIKSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDREQITVML 909
G K+I+FSQ+T LD+++ L + I + R DG M+ AR++++ +D V+L
Sbjct: 668 RGLRKTIIFSQFTTFLDIIDLHLRKAGIGFVRYDGRMNNRAREKSLDLLRSD-SGTQVLL 726
Query: 910 MSLKAGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDR 969
SLK G LGLN+ AS VIL D+WWNP E+QA+DR HRIGQ R V V +L + +T+E++
Sbjct: 727 CSLKCGALGLNLTCASRVILCDVWWNPAIEEQAIDRVHRIGQRRDVLVYKLVVENTIEEK 786
Query: 970 ILKLQDDKRKMVASAFGEDQGG-GTASRLTVEDLRYLF 1006
I++LQ+ KR + A G+ + T+ +LT+ DL +LF
Sbjct: 787 IVELQNLKRDLAKQALGDGKKSVFTSKKLTLNDLLFLF 824
>sp|Q6PCN7|HLTF_MOUSE Helicase-like transcription factor OS=Mus musculus GN=Hltf PE=1
SV=1
Length = 1003
Score = 308 bits (789), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 193/608 (31%), Positives = 293/608 (48%), Gaps = 105/608 (17%)
Query: 386 GTLVVCPASVLRQWARELEDKVPDKAALSVLIYHGGSRTKDPVELAKYDVVLTTYSIVTN 445
TL++CP SVL W + V + L+ +Y+G R +D L+K D++LT
Sbjct: 471 ATLIICPLSVLSNWIDQFGQHVKSEVHLNFYVYYGPDRIRDSAWLSKQDIILT------- 523
Query: 446 EVPKQPSVDEEEADEKNGETYGLSSEFSVNKKRKKISNVSKRGKKGKKGNVNSSIDYGC- 504
TY + + DYG
Sbjct: 524 -------------------TYNILTH-----------------------------DYGTK 535
Query: 505 --GPLAKVGWFRVVLDEAQTIKNHRTQVARACCSLRAKRRWCLSGTPIQNSIDDLYSYFR 562
PL + W RV+LDE I+N Q +A L A+RRW L+GTPIQNS+ DL+S
Sbjct: 536 DDSPLHSIKWLRVILDEGHAIRNPNAQQTKAVLELEAERRWVLTGTPIQNSLKDLWSLLS 595
Query: 563 FLKYDPYAVYKSFYSTIKIPISRNSLHGYKKLQAVLRAIMLRRTKGTFIDGQPIINLPPK 622
FLK P+ + +Y I+ P++ G ++LQ++++ I LRRTK + I G+P++ LP +
Sbjct: 596 FLKLKPFIDREWWYRIIQRPVTTGDEGGLRRLQSLIKNITLRRTKTSKIKGKPVLELPER 655
Query: 623 TISLTKVDFSKEEWAFYKKLESDSLKKFKAFADAGTVNQNYANILLMLLRLRQACDHPLL 682
+ + + S+EE Y+ ++++ + GTV +YA++L +LLRLRQ C H L
Sbjct: 656 KVFIQHITLSEEERKIYQSVKNEGKAAIGRYFTEGTVLAHYADVLGLLLRLRQICCHTHL 715
Query: 683 VKEYDFDSVGKISGEMAKRLPRDMLIDLLSRLETSSA--ICCVCSDPPEDSVVTMCGHVF 740
+ S G + + L R MLI+ + + +S + C +C D V+T C HVF
Sbjct: 716 LTN-GMSSSGPSRSDTPEEL-RKMLIEKMKIILSSGSDEECAICLDSLTFPVITHCAHVF 773
Query: 741 CYQCASEYITGDDNMCPAPRCKEQLGADVVFSKTTLKNCVSDD-GGGSPTDSPFADKSGI 799
C C + I + P C+ ++ D L C ++ S +S KS
Sbjct: 774 CKPCICQVIHSEQPHAKCPLCRNEIHGD------NLLECPPEELACDSDKESSMEWKS-- 825
Query: 800 LDNEYISSKIRTVLDILHTQCELNTKCSIVEIHDLAGSNGSSAVHSKSPIEGPIKSIVFS 859
SSKI ++H EL TK + IKS+V S
Sbjct: 826 ------SSKINA---LMHALIELRTK------------------------DPNIKSLVVS 852
Query: 860 QWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDF-NTDREQITVMLMSLKAGNLG 918
Q+T L L+E L + RLDG+M+ R +++ F NT+ T+ML+SLKAG +G
Sbjct: 853 QFTTFLSLIETPLKASGFVFTRLDGSMAQKKRVESIQRFQNTEAGSPTIMLLSLKAGGVG 912
Query: 919 LNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRILKLQDDKR 978
LN+ AAS V L+D WNP EDQ DR HR+GQ + V +T+ ++D+VE+ +LK+Q+ KR
Sbjct: 913 LNLCAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLKIQNTKR 972
Query: 979 KMVASAFG 986
+ A AFG
Sbjct: 973 DLAAGAFG 980
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 65/166 (39%), Gaps = 42/166 (25%)
Query: 250 YQAALEDLNQPKVEATL-PDGLLSVNLLKHQKIALAWMLQKET----------------- 291
+ EDL + + P + LL HQK ALAWM+ +E
Sbjct: 214 FDKLFEDLKEDDRTVEMEPAEAIETPLLPHQKQALAWMIARENSKELPPFWEQRNDLYYN 273
Query: 292 ---------RSLHCLGGILADDQGLGKTISIIALIQMQ----RSLQSK-SKTEVLGNQ-- 335
R + GGILADD GLGKT++ IA+I R L SK K G +
Sbjct: 274 TITNFSVKERPENVHGGILADDMGLGKTLTAIAVILTNFDDGRPLLSKRGKKNHPGKEYK 333
Query: 336 ----KTEALNLDDDDDNGNAGLDKVKETGESDDIKPVPEVSTSTRS 377
K N+D +D G + GE I PE S+ T S
Sbjct: 334 DETIKRRGSNMDKKED----GHSESSTCGEEPSISGTPEKSSCTLS 375
>sp|P0CQ67|RAD5_CRYNB DNA repair protein RAD5 OS=Cryptococcus neoformans var. neoformans
serotype D (strain B-3501A) GN=RAD5 PE=3 SV=1
Length = 1198
Score = 306 bits (784), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 228/755 (30%), Positives = 349/755 (46%), Gaps = 131/755 (17%)
Query: 298 GGILADDQGLGKTISIIALIQMQRSLQSKSKTEVLGNQKTEALNLDDDDDNGNAGLDKVK 357
GGILAD G+GKT + +LI R + E +Q + + + D++ + + K K
Sbjct: 517 GGILADAMGMGKTCMMASLIHTNREEKPAGNLE---SQTRDGVEGEIDEEPASKRI-KFK 572
Query: 358 ETGESDDIKPVPEVSTSTRSFSRRRPAAGTLVVCPASVLRQWARELEDKVPDKAALSVLI 417
+ S+ + VP + SF R TLVVCP S+ QW EL K+ + +++ +
Sbjct: 573 QVTLSNQWRAVP-TAPKVESFPR-----ATLVVCPVSLAAQWHDELR-KMSQQGSINSYV 625
Query: 418 YHGGSRTKDPVELA-----KYDVVLTTYSIVTNEVPKQPSVDEEEADEKNGETYGLSSEF 472
++GG R LA + DV++T+Y +T+E K +
Sbjct: 626 WYGGDRVDIEALLAGDGKERVDVIVTSYGTLTSEYQK----------------------W 663
Query: 473 SVNKKRKKISNVSKRGKKGKKGNVNSSIDYGCGPLAKVGWFRVVLDEAQTIKNHRTQVAR 532
K R +Y G L + R+VLDEA I+N V++
Sbjct: 664 LRTKDRP---------------------NYEGGSLYDHEFLRIVLDEAHNIRNRLAMVSK 702
Query: 533 ACCSLRAKRRWCLSGTPIQNSIDDLYSYFRFLKYDPYAVYKSFYSTIKIPISRNSLHGYK 592
AC L+ +RRW L+GTPI N ++DLYS FL+ P+ Y F S + +P
Sbjct: 703 ACYELKGQRRWALTGTPIVNRLEDLYSLLHFLRITPWGNYSFFRSFVTVPFLNQDHKALN 762
Query: 593 KLQAVLRAIMLRRTKGTF-IDGQPIINLPPKTISLTKVDFSKEEWAFYKKLESDSLKKFK 651
+Q +L + +LRR K DG+ I++LPPKT+ + + FS+ E YK LE + K+F
Sbjct: 763 VVQYILESCLLRREKTMRDKDGRLIVDLPPKTVEIKVLQFSRAERQIYKFLEERAKKRFI 822
Query: 652 AFADAGTVNQNYANILLMLLRLRQACDHPLLV----------KEYDFDS----------- 690
G NY +IL ML++LRQ DHPLLV E +S
Sbjct: 823 ELDADGRAMSNYTSILAMLMKLRQCVDHPLLVLGKSGEDGELGEKILESGAGNGEGNLRD 882
Query: 691 -----VGKISGEMAKRLPRDMLIDLLSRL--ETSSAICCVCSDPPEDSVVTMCGHVFCYQ 743
G I E + + +L L + + IC +CS+ D V+ C H C
Sbjct: 883 MIAMYAGGIRAETPDDVDKAYAAKVLKELGEQEDTPICELCSNEMFDEVLLPCYHRSCQD 942
Query: 744 CASEYI-TGDDN--MCPAPRCKE---QLGADV--VFSKTTLKNCVSD--DGGGSPTDSPF 793
C E+I T +D + P C + +L AD+ V + N ++D GG P
Sbjct: 943 CIVEWIGTCEDQNKIASCPSCGKGPIKL-ADLRSVQRRHKRVNPITDAYPGGRDPNSKSS 1001
Query: 794 ADKSGILD--NEYISSKIRTVLDILHTQCELNTKCSIVEIHDLAGSNGSSAVHSKSPIEG 851
D + L + S+K+R +L L + + K
Sbjct: 1002 NDTTVTLGKVDLVTSTKLRALLRQLEEIRQEDPKA------------------------- 1036
Query: 852 PIKSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDREQITVMLMS 911
K++VFSQ+T LDL+E +L + I++ R DGTMS R +++F + ++L+S
Sbjct: 1037 --KALVFSQFTSFLDLIEATLTKQGIRWLRFDGTMSQAQRANTIEEFGRKTNEPLILLIS 1094
Query: 912 LKAGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRIL 971
LKAG +GLN+ A++V L+D WWN E QA+DR HR+GQ +PV VTR I+ TVE RI+
Sbjct: 1095 LKAGGVGLNLTMANYVFLMDTWWNEAIEQQAIDRVHRLGQNKPVYVTRYIIKGTVEKRIM 1154
Query: 972 KLQDDKRKMVASAFGEDQGGGTASRLTVEDLRYLF 1006
K+Q K +V ++ G T+ D++ +F
Sbjct: 1155 KIQRSKTALVNASLS---NGAKTKETTLADIKKIF 1186
>sp|P0CQ66|RAD5_CRYNJ DNA repair protein RAD5 OS=Cryptococcus neoformans var. neoformans
serotype D (strain JEC21 / ATCC MYA-565) GN=RAD5 PE=3
SV=1
Length = 1198
Score = 305 bits (782), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 228/755 (30%), Positives = 351/755 (46%), Gaps = 131/755 (17%)
Query: 298 GGILADDQGLGKTISIIALIQMQRSLQSKSKTEVLGNQKTEALNLDDDDDNGNAGLDKVK 357
GGILAD G+GKT + +LI R + E +Q + + + D++ + + K K
Sbjct: 517 GGILADAMGMGKTCMMASLIHTNREEKPAGNLE---SQTRDGVEGEIDEEPASKRI-KFK 572
Query: 358 ETGESDDIKPVPEVSTSTRSFSRRRPAAGTLVVCPASVLRQWARELEDKVPDKAALSVLI 417
+ S+ + VP + SF R TLVVCP S+ QW EL K+ + +++ +
Sbjct: 573 QVTLSNQWRAVP-TAPKVESFPR-----ATLVVCPVSLAAQWHDELR-KMSQQGSINSYV 625
Query: 418 YHGGSRTKDPVELA-----KYDVVLTTYSIVTNEVPKQPSVDEEEADEKNGETYGLSSEF 472
++GG R LA + DV++T+Y +T+E K +
Sbjct: 626 WYGGDRVDIEALLAGDGKERVDVIVTSYGTLTSEYQK----------------------W 663
Query: 473 SVNKKRKKISNVSKRGKKGKKGNVNSSIDYGCGPLAKVGWFRVVLDEAQTIKNHRTQVAR 532
K R +Y G L + R+VLDEA I+N V++
Sbjct: 664 LRTKDRP---------------------NYEGGSLYDHEFLRIVLDEAHNIRNRLAMVSK 702
Query: 533 ACCSLRAKRRWCLSGTPIQNSIDDLYSYFRFLKYDPYAVYKSFYSTIKIPISRNSLHGYK 592
AC L+ +RRW L+GTPI N ++DLYS FL+ P+ Y F S + +P
Sbjct: 703 ACYELKGQRRWALTGTPIVNRLEDLYSLLHFLRITPWGNYSFFRSFVTVPFLNQDHKALN 762
Query: 593 KLQAVLRAIMLRRTKGTF-IDGQPIINLPPKTISLTKVDFSKEEWAFYKKLESDSLKKFK 651
+Q +L + +LRR K DG+ I++LPPKT+ + + FS+ E YK LE + K+F
Sbjct: 763 VVQYILESCLLRREKTMRDKDGRLIVDLPPKTVEIKVLQFSRAERQIYKFLEERAKKRFI 822
Query: 652 AFADAGTVNQNYANILLMLLRLRQACDHPLLV---------------------KEYDF-D 689
G NY +IL ML++LRQ DHPLLV E + D
Sbjct: 823 DLDADGRAMSNYTSILAMLMKLRQCVDHPLLVLGKSGEDGELGEKILESGAGNGEGNLRD 882
Query: 690 SVGKISGEMAKRLPRDM----LIDLLSRL--ETSSAICCVCSDPPEDSVVTMCGHVFCYQ 743
+ +G + P D+ +L L + + IC +CS+ D V+ C H C
Sbjct: 883 MIAMYAGGIRAETPEDVDKAYAAKVLKELGEQEDTPICELCSNEMFDEVLLPCYHRSCQD 942
Query: 744 CASEYI-TGDDN--MCPAPRCKE---QLGADV--VFSKTTLKNCVSD--DGGGSPTDSPF 793
C E+I T +D + P C + +L AD+ V + N ++D GG P
Sbjct: 943 CIVEWIGTCEDQNKIASCPSCGKGPIKL-ADLRSVQRRHKRVNPITDAYPGGRDPNLKSS 1001
Query: 794 ADKSGILD--NEYISSKIRTVLDILHTQCELNTKCSIVEIHDLAGSNGSSAVHSKSPIEG 851
D + L + S+K+R +L L + + K
Sbjct: 1002 NDTTVTLGKVDLVTSTKLRALLRQLEEIRQEDPKA------------------------- 1036
Query: 852 PIKSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDREQITVMLMS 911
K++VFSQ+T LDL+E +L + I++ R DGTMS R +++F + ++L+S
Sbjct: 1037 --KALVFSQFTSFLDLIEATLTKQGIRWLRFDGTMSQAQRANTIEEFGRKTNEPLILLIS 1094
Query: 912 LKAGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRIL 971
LKAG +GLN+ A++V L+D WWN E QA+DR HR+GQ +PV VTR I+ TVE RI+
Sbjct: 1095 LKAGGVGLNLTMANYVFLMDTWWNEAIEQQAIDRVHRLGQNKPVYVTRYIIKGTVEKRIM 1154
Query: 972 KLQDDKRKMVASAFGEDQGGGTASRLTVEDLRYLF 1006
K+Q K +V ++ G T+ D++ +F
Sbjct: 1155 KIQRSKTALVNASLS---NGAKTKETTLADIKKIF 1186
>sp|Q4WVM1|RAD5_ASPFU DNA repair protein rad5 OS=Neosartorya fumigata (strain ATCC MYA-4609
/ Af293 / CBS 101355 / FGSC A1100) GN=rad5 PE=3 SV=2
Length = 1245
Score = 302 bits (774), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 229/792 (28%), Positives = 362/792 (45%), Gaps = 183/792 (23%)
Query: 295 HCLGGILADDQGLGKTISIIALIQMQRSLQSKSKTEVLGNQKTEALNLDDDDDNGNAGLD 354
HCLGGILAD+ GLGKTI +++LI R N+ ++ +
Sbjct: 556 HCLGGILADEMGLGKTIEMLSLIHSHR-------------------NVSPSRQGPSSSTE 596
Query: 355 KVKETGESDDIKPVPEVSTSTRSFSRRRPAAGTLVVCPASVLRQWARELEDKVPDKAALS 414
V+ S I P P TLVV P S+L QW E K ++ +
Sbjct: 597 LVRMPSSSSAILPAPNT---------------TLVVAPTSLLSQWESEAM-KASEQGTMK 640
Query: 415 VLIYHGGSRTKDPVEL------AKYDVVLTTYSIVTNEVPKQPSVDEEEADEKNGETYGL 468
VL+Y+G ++ + EL A ++++T+Y +V +E
Sbjct: 641 VLMYYGVDKSTNLQELCSAGNPAAPNIIITSYGVVLSE---------------------- 678
Query: 469 SSEFSVNKKRKKISNVSKRGKKGKKGNVNSSIDYGCGPLAKVGWFRVVLDEAQTIKNHRT 528
++ N N+ G L V +FRV+LDEA IKN R+
Sbjct: 679 -------------------SRQLAMFNSNTQ-----GGLFSVDFFRVILDEAHVIKNRRS 714
Query: 529 QVARACCSLRAKRRWCLSGTPIQNSIDDLYSYFRFLKYDPYAVYKSFYSTIKIPI-SRNS 587
+ ARAC LRA RW L+GTPI N ++DL+S RFL+ +P+ + + + I +P S++
Sbjct: 715 KTARACYELRATHRWVLTGTPIVNRLEDLFSLVRFLQVEPWNNFSFWKTFITVPFESKDY 774
Query: 588 LHGYKKLQAVLRAIMLRRTKGTFI-DGQPIINLPPKTISLTKVDFSKEEWAFYKKLESDS 646
+ +Q VL ++LRRTK +G+P++ LP +TI + +V+ S++E Y + + +
Sbjct: 775 VRALNVVQTVLEPLVLRRTKTMKTPEGEPLVPLPRRTIDIVEVELSEQEREIYDYIFTRA 834
Query: 647 LKKFKAFADAGTVNQNYANILLMLLRLRQACDHPLLVKEY-------------------- 686
+ F +AGT+ ++++ I +LRLRQ C HP+L +
Sbjct: 835 KRTFNDNIEAGTLLKSFSTIFAQILRLRQTCCHPILTRNKTIVADEEDAAATADAANELK 894
Query: 687 -DFD---SVGKISGEM-------AKRLPRDMLIDLLSRLET-SSAICCVCSDPPE-DSVV 733
D D + + S M A+ L +++T SS C +CS+ P D V
Sbjct: 895 DDMDLQELIDRFSASMENADTAEAQDPSAKFTTHALRQIQTESSGECPICSEEPMIDPAV 954
Query: 734 TMCGHVFCYQCASEYITGDDNMCPAPRCKEQLGADVVFSKTTLKNCVSDDGGGSPTDSPF 793
T C H C +C +YI + PRC V S+ + +PT++
Sbjct: 955 TACWHSACKKCLEDYIRHQTDKGVPPRCFSCRAP--VTSRDIFQVIRHQSPSSTPTETDL 1012
Query: 794 ADKSGILDNEYISSKIRTVLDILHTQCELNTKCSIVEIHDLAGSNGSSA-----VHSKSP 848
Y S+ + + S+ IH L+ S +SA ++ +
Sbjct: 1013 ----------YSSTPA--------SSPHPAPRISLRRIHPLSPSAHTSAKIHALINHLNR 1054
Query: 849 IEGPIKSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFN--------- 899
+ KS+VFSQ+T LDL+ L + I Y RLDGTM AR + +FN
Sbjct: 1055 VPANTKSVVFSQFTSFLDLIGAQLTKAGISYVRLDGTMPQKARAEVLAEFNRTETFHQEE 1114
Query: 900 --------TDREQIT------------VMLMSLKAGNLGLNMVAASHVILLDLWWNPTTE 939
T R +I+ V+L+SL+AG +GLN+ AAS+V ++D WW+ E
Sbjct: 1115 IDEDEGPDTPRVRISSKNSRSSPKSPAVLLISLRAGGVGLNLTAASNVFMMDPWWSFAIE 1174
Query: 940 DQAVDRAHRIGQTRPVTVTRLTIRDTVEDRILKLQDDKRKM-VASAFGEDQGGGTAS--- 995
QA+DR HR+GQ R V+VTR ++D++E R+L++Q+ RKM +A + G GG +
Sbjct: 1175 AQAIDRVHRMGQLRDVSVTRFIVKDSIEGRMLRVQE--RKMNIAGSLGLRVGGDGSEDEK 1232
Query: 996 -RLTVEDLRYLF 1006
+ +E+L+ LF
Sbjct: 1233 RKERIEELKLLF 1244
>sp|P36607|RAD5_SCHPO DNA repair protein rad5 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=rad8 PE=1 SV=1
Length = 1133
Score = 299 bits (766), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 222/735 (30%), Positives = 342/735 (46%), Gaps = 153/735 (20%)
Query: 298 GGILADDQGLGKTISIIALIQMQRSLQSKSKTEVLGNQKTEALNLDDDDDNGNAGLDKVK 357
GGILAD+ GLGKTI +++LI + + E + K
Sbjct: 524 GGILADEMGLGKTIEVLSLIHSRPCFSTDEIPEAFRHSK--------------------- 562
Query: 358 ETGESDDIKPVPEVSTSTRSFSRRRPAAGTLVVCPASVLRQWARELEDKVPDKAALSVLI 417
P + ++R+ TLVV P S+L QW E KV +I
Sbjct: 563 -----------PSLPVASRT---------TLVVAPMSLLDQWHSE-ACKVSQGTKFRSMI 601
Query: 418 YHGGSRTKDPVELAKYDVVLTTYSIVTNEVPKQPSVDEEEADEKNGETYG-LSSEFSVNK 476
Y+G + P++L K +D A +YG L SEFS
Sbjct: 602 YYGSEK---PLDL------------------KSCVIDTSTAPLIIITSYGVLLSEFSQQS 640
Query: 477 KRKKISNVSKRGKKGKKGNVNSSIDYGCGPLAKVGWFRVVLDEAQTIKNHRTQVARACCS 536
+ G L V WFRVVLDE I+N ++ A+AC S
Sbjct: 641 -------------------------HSSG-LFSVHWFRVVLDEGHNIRNRESKTAKACHS 674
Query: 537 LRAKRRWCLSGTPIQNSIDDLYSYFRFLKYDPYAVYKSFYSTIKIPI-SRNSLHGYKKLQ 595
+ ++ RW ++GTPI N +DDLYS +F++Y+P+ Y + + + +P S++ L +Q
Sbjct: 675 ISSQNRWVITGTPIVNKLDDLYSLIKFMRYEPWCNYTYWQTFVSLPYQSKDVLKALNVVQ 734
Query: 596 AVLRAIMLRRTKGTF-IDGQPIINLPPKTISLTKVDFSKEEWAFYKKLESDSLKKFKAFA 654
++L ++LRRTK T +G I+ LPPKT+ + +DFS E Y L + + A
Sbjct: 735 SILEFLVLRRTKETKDRNGNSIVTLPPKTVKIEYLDFSDSERKIYDSLYTKAKSTVNANI 794
Query: 655 DAGTVNQNYANILLMLLRLRQACDHPLLVK------------EYDFDSVGKISGEMA--- 699
AGT+ +NY IL +LLRLRQAC P+L+ E+ + + +
Sbjct: 795 VAGTLFRNYTTILGLLLRLRQACCDPVLLSNMTINSETFDDFEFSVEQFNSLINQFVVTG 854
Query: 700 KRLPRDML-IDLLSRLE---TSSAICCVCSDPPEDSVVTMCGHVFCYQCASEYITGDD-- 753
K +P D+L ID L E T IC C++P ++ ++ C H C C SE+I
Sbjct: 855 KPIPSDILKIDTLKSFEALITECPIC--CNEPIQNPLLLNCKHACCGDCLSEHIQYQKRR 912
Query: 754 NMCP--APRCKEQLGADVVFSKTTLKNCVSDDGGGSPTDSPFADKSGILDNEYISSKIRT 811
N+ P C++ V+ +KN G+ +S +L E + K
Sbjct: 913 NIIPPLCHTCRQPFNEQDVYKPFFVKN------NGT--------QSTLLVGEEVKWKYWN 958
Query: 812 VLDILHTQCELNTKCSIVEIHDLAGSNGSSAVHSKSPIEGPIKSIVFSQWTRMLDLVENS 871
L V+++ L G HS P K ++FSQ+T LD++ +
Sbjct: 959 RL-------------QSVKLNGLLG-QLRQLTHSSE----PEKVVIFSQFTTFLDIIADV 1000
Query: 872 LNQHCIQYRRLDGTMSLPARDRAVKDFNTDREQITVMLMSLKAGNLGLNMVAASHVILLD 931
L + Y R DGTMS R A++ F D + + V+++SLKAG +GLN+ A+HV ++D
Sbjct: 1001 LESEKMGYARFDGTMSQQMRSTALETFRNDPD-VNVLIISLKAGGVGLNLTCANHVFIMD 1059
Query: 932 LWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRILKLQDDKRKMVASAFGEDQGG 991
WW+ + E QA+DR HR+GQ +PV VTR +RDTVE+R+LK+Q +++ + G +G
Sbjct: 1060 PWWSWSVEAQAIDRIHRLGQEKPVFVTRYIVRDTVEERMLKIQ-ERKNFITGTLGMSEGK 1118
Query: 992 GTASRLTVEDLRYLF 1006
++ED++ LF
Sbjct: 1119 QQVQ--SIEDIKMLF 1131
>sp|Q7S1P9|RAD5_NEUCR DNA repair protein rad-5 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=rad-5
PE=3 SV=2
Length = 1222
Score = 291 bits (744), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 212/736 (28%), Positives = 343/736 (46%), Gaps = 152/736 (20%)
Query: 295 HCLGGILADDQGLGKTISIIALIQMQRSLQSKSKTEVLGNQKTEALNLDDDDDNGNAGLD 354
HCLGGILAD+ GLGKTI +++LI RS EV
Sbjct: 573 HCLGGILADEMGLGKTIQMLSLIHSHRS-------EVAI--------------------- 604
Query: 355 KVKETGESDDIKPVPEVSTSTRSFSRRRPAAGTLVVCPASVLRQWARELEDKVPDKAALS 414
K +E G + + +P + T + + TLVV P S+L QW E E+ +
Sbjct: 605 KAREAGPTS-VNNLPRLPTVSGQKTTIDAPCTTLVVAPMSLLAQWQSEAEN-ASKEGTFK 662
Query: 415 VLIYHGGSRTKDPVELA-------KYDVVLTTYSIVTNEVPKQPSVDEEEADEKNGETYG 467
++Y+G + D V + DV++T+Y +V +E + + KNG+
Sbjct: 663 TMMYYGAEKNVDLVTMCCEANAANAPDVIITSYGVVLSEFTQLAT--------KNGDRLS 714
Query: 468 LSSEFSVNKKRKKISNVSKRGKKGKKGNVNSSIDYGCGPLAKVGWFRVVLDEAQTIKNHR 527
FS+N +FRV+LDEA IKN +
Sbjct: 715 SRGLFSLN------------------------------------FFRVILDEAHNIKNRQ 738
Query: 528 TQVARACCSLRAKRRWCLSGTPIQNSIDDLYSYFRFLKYDPYAVYKSFYSTIKIPI-SRN 586
+ +RAC + A+ RW L+GTPI N ++DL+S RFL+ +P+ + + + I +P S+N
Sbjct: 739 AKTSRACYEIAAEHRWVLTGTPIVNRLEDLFSLVRFLRVEPWNNFSFWRTFITVPFESKN 798
Query: 587 SLHGYKKLQAVLRAIMLRRTKGTFI-DGQPIINLPPKTISLTKVDFSKEEWAFYKKLESD 645
+ +Q VL +++RRTK DGQ ++ LPPK I + ++ S+ E A Y + +
Sbjct: 799 FVRALDVVQTVLEPLVMRRTKDMKTPDGQFLVPLPPKHIEIVDIELSEPERAVYDYVFNR 858
Query: 646 SLKKFKAFADAGTVNQNYANILLMLLRLRQACDHPLLVKEYDF---DSVGKISGEMAKRL 702
+ + AGTV + + +I +LRLRQ+C HP+LV+ + + ++ ++A L
Sbjct: 859 AKRTLFDNMQAGTVMKAFTSIFAQILRLRQSCCHPVLVRNQEILADEEEANMAADVAAGL 918
Query: 703 PRDMLIDLLSRLETSSAI--------------------------CCVCSDPPE-DSVVTM 735
DM DL + +E +A C +C++ P D VT
Sbjct: 919 ADDM--DLQTLIERFTATTDDASKTNNNFGAHVLRQIRDEAVNECPICAEEPMIDQAVTG 976
Query: 736 CGHVFCYQCASEYITGDDNMCPAPR---CKEQLGADVVFSKTTLKNCV--SDDGGGSPTD 790
C H C +C +YI + PR C+E + +F + + S G SP
Sbjct: 977 CWHSACKKCLLDYIKHQTDRNEVPRCFQCREHINIRDIFEVIRHDDDLETSSTPGASPEP 1036
Query: 791 SPFADKSGILDNEYISSKIRTVLDILHTQCELNTKCSIVEIHDLAGSNGSSAVHSKSPIE 850
+ G D+ S+KI ++ L T + + K
Sbjct: 1037 RISLQRVGANDS---SAKIVALISHLRTLRQEHPK------------------------- 1068
Query: 851 GPIKSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDREQITVMLM 910
+KS+V SQ+T L L+ ++L +H I + RLDG+MS AR + +F + + V+L+
Sbjct: 1069 --MKSLVISQFTSFLSLISSALTRHKISFLRLDGSMSQKARAAVLTEFQST-NKFCVLLL 1125
Query: 911 SLKAGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRI 970
SLKAG +GLN+ +A V ++D WW+ E QA+DR HR+GQ V V R ++ +VE R+
Sbjct: 1126 SLKAGGVGLNLTSAKRVYMMDPWWSFAVEAQAIDRVHRMGQEDEVRVYRFIVKQSVEMRM 1185
Query: 971 LKLQDDKRKMVASAFG 986
L++Q +++K +A++ G
Sbjct: 1186 LRVQ-ERKKFIATSLG 1200
>sp|Q5BHD6|RAD5_EMENI DNA repair protein rad5 OS=Emericella nidulans (strain FGSC A4 / ATCC
38163 / CBS 112.46 / NRRL 194 / M139) GN=rad5 PE=3 SV=1
Length = 1202
Score = 290 bits (742), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 227/775 (29%), Positives = 351/775 (45%), Gaps = 187/775 (24%)
Query: 295 HCLGGILADDQGLGKTISIIALIQMQRSLQSKSKTEVLGNQKTEALNLDDDDDNGNAGLD 354
HCLGGILAD+ GLGKTI +++L+ R+L T+ LGN L
Sbjct: 509 HCLGGILADEMGLGKTIEMLSLVHSHRNL---PPTQSLGN------------------LT 547
Query: 355 KVKETGESDDIKPVPEVSTSTRSFSRRRPAAGTLVVCPASVLRQWARELEDKVPDKAALS 414
++ +G + P P TLVV P S+L QW E K ++
Sbjct: 548 RLPVSG----VVPAPYT---------------TLVVAPMSLLAQWEGEAL-KASRNGSMK 587
Query: 415 VLIYHGGSRTKDPVEL------AKYDVVLTTYSIVTNEVPKQPSVDEEEADEKNGETYGL 468
VL+Y+G + + E+ A +++LT+Y +V +E
Sbjct: 588 VLMYYGNEKNVNLREMCSAGNAAAPNMILTSYGVVMSE---------------------- 625
Query: 469 SSEFSVNKKRKKISNVSKRGKKGKKGNVNSSIDYGCGPLAKVGWFRVVLDEAQTIKNHRT 528
+ G GN+ S V +FRV+LDEA IKN R+
Sbjct: 626 ----------HRTHQALAPGTSWTPGNLFS-----------VDFFRVILDEAHIIKNRRS 664
Query: 529 QVARACCSLRAKRRWCLSGTPIQNSIDDLYSYFRFLKYDPYAVYKSFYSTIKIPI-SRNS 587
+ ARAC L+A RW L+GTPI N ++DL+S RFL+ +P+ + + + I P S+
Sbjct: 665 KTARACYDLKATHRWVLTGTPIVNRLEDLFSLVRFLRVEPWNNFSFWKTFITAPFESKEV 724
Query: 588 LHGYKKLQAVLRAIMLRRTKGTFI-DGQPIINLPPKTISLTKVDFSKEEWAFYKKLESDS 646
+ +Q VL ++LRRTK +G+P++ LP +TI + KV+ ++E Y + + +
Sbjct: 725 VRAISVVQTVLEPLVLRRTKSMKTPEGEPLVPLPKRTIRIEKVELIEQEREIYNHIYTRA 784
Query: 647 LKKFKAFADAGTVNQNYANILLMLLRLRQACDHPLLVK---------------------- 684
+ F + AGT+ ++Y+ I LLRLRQ C HP+L +
Sbjct: 785 KQTFNSNVAAGTLLKSYSTIFAQLLRLRQTCCHPILTRNKAIVADEEDAAAAADQDSDLK 844
Query: 685 -EYDFDSV-----GKISGEMAKRLPRDMLIDL----LSRLETSSA-ICCVCSDPPE-DSV 732
+ D + S + P D + L +++T SA C +CS+ P D
Sbjct: 845 DDMDLQELINRFTATTSDAESSNEPPDPSMKFTAHALRQIQTESAGECPICSEEPMIDPA 904
Query: 733 VTMCGHVFCYQCASEYITGDDNMCPAPR---CKEQLGADVVFSKTTLKNCVSDDGGGSPT 789
VT C H C C +YI + PR C+ L +F ++ +PT
Sbjct: 905 VTACWHSACKGCLKDYIQHQRDKGVQPRCFSCRADLNPQDIFEVVRYQS-----PNTTPT 959
Query: 790 DSPFADKSGILDNEYISSKIRTVLDILHTQCELNTKCSIVEIHDLAGSNGSSA-VHSKSP 848
+ + G DN Y SS Q + S+ I+ L+ S +SA +H+
Sbjct: 960 EQTPSSIGG--DNVYSSS-----------QPPPPPRISLRRINPLSPSAHTSAKIHALLA 1006
Query: 849 ----IEGPIKSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNT---- 900
+ KS+VFSQ+T LDL+ L + I + RLDGTM+ AR + F
Sbjct: 1007 HLVRVPAGTKSVVFSQFTSFLDLIGPQLTKAGISFVRLDGTMAQKARAEVLAQFTKFETF 1066
Query: 901 DREQI----------------------------TVMLMSLKAGNLGLNMVAASHVILLDL 932
+E++ TV+L+SLKAG +GLN+ AAS+V ++D
Sbjct: 1067 TQEELDQAESTSAPSGLTPTPKTPKQSSSPSSPTVLLISLKAGGVGLNLTAASNVFMMDP 1126
Query: 933 WWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRILKLQDDKRKM-VASAFG 986
WW+ E QA+DR HR+GQ R V V R ++D++E+R+L++Q+ RKM +A + G
Sbjct: 1127 WWSFAIEAQAIDRVHRMGQLRDVNVVRFIVKDSIEERMLRVQE--RKMGIAGSLG 1179
>sp|P79051|RHP16_SCHPO ATP-dependent helicase rhp16 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rhp16 PE=3 SV=2
Length = 861
Score = 287 bits (734), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 197/658 (29%), Positives = 309/658 (46%), Gaps = 140/658 (21%)
Query: 387 TLVVCPASVLRQWARELEDKVPDKAALSVLIYHGGSRTKDPVELAKYDVVLTTYSIVTNE 446
TLVV P + QW E++ ALS +Y+G +R EL+ YDVVLT+Y+++
Sbjct: 304 TLVVAPVVAIMQWKEEIDTHT--NKALSTYLYYGQARDISGEELSSYDVVLTSYNVIE-- 359
Query: 447 VPKQPSVDEEEADEKNGETYGLSSEFSVNKKRKKISNVSKRGKKGKKGNVNSSIDYGCGP 506
SV +K + G + K G V
Sbjct: 360 --------------------------SVYRKERS-------GFRRKNGVVKEK-----SL 381
Query: 507 LAKVGWFRVVLDEAQTIKNHRTQVARACCSLRAKRRWCLSGTPIQNSIDDLYSYFRFLKY 566
L ++ ++R++LDEA IK+ ARA C LR R+ CLSGTP+QN I +L+S RFL+
Sbjct: 382 LHQMEFYRIILDEAHGIKSRTCNTARAVCGLRTTRKICLSGTPLQNRIGELFSLLRFLRA 441
Query: 567 DPYAVYKS-------------------------------FYSTIKIPISRNSLHG----- 590
DP+A Y F + + PI + G
Sbjct: 442 DPFAYYYCLQCECKSLHWRFSDRSNCDECGHKPMSHTCYFNAEMLKPIQKFGYEGPGKLA 501
Query: 591 YKKLQAVLRAIMLRRTKGTFIDGQPIINLPPKTISLTKVDFSKEEWAFYKKLESDSLKKF 650
+KK+ ++L+ IMLRRTK D + LPP+ + + K F++EE Y+ L DS +KF
Sbjct: 502 FKKVHSLLKHIMLRRTKLERADD---LGLPPRVVEVRKDLFNEEEEDVYQSLYMDSKRKF 558
Query: 651 KAFADAGTVNQNYANILLMLLRLRQACDHPLLVKEYDFDSVGKISGEMAKRLPRDMLIDL 710
+ G V NYANI ++ R+RQ DHP LV +KR D+
Sbjct: 559 NTYLAEGVVLNNYANIFQLITRMRQMADHPDLVL-------------ASKRKTVDIE--- 602
Query: 711 LSRLETSSAICCVCSDPPEDSVVTMCGHVFCYQCASEYI--TGDDNMCPAPRCKEQLGAD 768
+ +C +C + +D++ + C H FC C +EYI GD P C L D
Sbjct: 603 ----NQENIVCKICDEVAQDAIESRCHHTFCRLCVTEYINAAGDGENVNCPSCFIPLSID 658
Query: 769 VVFSKTTLKNCVSDDGGGSPTDSPFADKSGILDNEYISSKIRTVLDILHTQCELNTKCSI 828
+ +P F+++ ++ ++ I +D+ + + +
Sbjct: 659 L----------------SAPALEDFSEE------KFKNASILNRIDMNSWRSSTKIEALV 696
Query: 829 VEIHDLAGSNGSSAVHSKSPIEGPIKSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSL 888
E++ L + + +KSIVFSQ+T MLDL+ L + +LDG M+
Sbjct: 697 EELYLLRKKDRT------------LKSIVFSQFTSMLDLIHWRLRKAGFNCVKLDGGMTP 744
Query: 889 PARDRAVKDFNTDREQITVMLMSLKAGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHR 948
AR ++ F+ D IT+ L+SLKAG + LN+ AS V ++D WWN + QA+DR HR
Sbjct: 745 KARAATIEAFSNDI-NITIFLVSLKAGGVALNLTEASQVFMMDPWWNGAVQWQAMDRIHR 803
Query: 949 IGQTRPVTVTRLTIRDTVEDRILKLQDDKRKMVASAFGEDQGGGTASRLTVEDLRYLF 1006
IGQ RP+ V L I +++E +I++LQ+ K +M+ + +D+ ++L+VED+++LF
Sbjct: 804 IGQKRPIKVITLCIENSIESKIIELQEKKAQMIHATIDQDEKA--LNQLSVEDMQFLF 859
Score = 43.5 bits (101), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 271 LSVNLLKHQKIALAWMLQKETRSLHCLGGILADDQGLGKTISIIALI 317
L +NLL Q+ + W+ ++E S GGILAD+ G+GKTI IAL+
Sbjct: 251 LVLNLLPFQREGVYWLKRQEDSSFG--GGILADEMGMGKTIQTIALL 295
>sp|Q4IJ84|RAD5_GIBZE DNA repair protein RAD5 OS=Gibberella zeae (strain PH-1 / ATCC
MYA-4620 / FGSC 9075 / NRRL 31084) GN=RAD5 PE=3 SV=1
Length = 1154
Score = 285 bits (729), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 210/732 (28%), Positives = 340/732 (46%), Gaps = 148/732 (20%)
Query: 295 HCLGGILADDQGLGKTISIIALIQMQRSLQSKSKTEVLGNQKTEALNLDDDDDNGNAGLD 354
HCLGGILAD+ GLGKTI +++L+ RS EV + + + ++
Sbjct: 511 HCLGGILADEMGLGKTIQMLSLVHTHRS-------EVALEARQSVV--------ARSNVN 555
Query: 355 KVKETGE-SDDIKPVPEVSTSTRSFSRRRPAAGTLVVCPASVLRQWARELEDKVPDKAAL 413
++ G+ S+ I P TLVV P S+L QW E E K +
Sbjct: 556 QLTRLGKNSESILDAP---------------CTTLVVAPMSLLSQWQSEAE-KASKDGTM 599
Query: 414 SVLIYHGGSRTKDPVELA-------KYDVVLTTYSIVTNEVPKQPSVDEEEADEKNGETY 466
+Y+G ++ + L D+V+T+Y +V
Sbjct: 600 KTELYYGNEKSSNLQALCCASNAANAPDLVITSYGVVL---------------------- 637
Query: 467 GLSSEFSVNKKRKKISNVSKRGKKGKKGNVNSSIDYGCGPLAKVGWFRVVLDEAQTIKNH 526
SEFS S + G K N L + +FR+++DEA IKN
Sbjct: 638 ---SEFS-----------SLAARNGDKSFHNG--------LFSLRFFRIIIDEAHHIKNR 675
Query: 527 RTQVARACCSLRAKRRWCLSGTPIQNSIDDLYSYFRFLKYDPYAVYKSFYSTIKIPI-SR 585
++ ++AC + A RW L+GTPI N ++DL+S RFL +P+ + + + I +P S
Sbjct: 676 SSKTSKACYEISATHRWALTGTPIVNKLEDLFSLVRFLGVEPWNNFSFWRTFITVPFESG 735
Query: 586 NSLHGYKKLQAVLRAIMLRRTKGTFI-DGQPIINLPPKTISLTKVDFSKEEWAFYKKLES 644
+ + +Q VL ++LRRTK DG+P++ LPPK I + V+ S+ E Y + +
Sbjct: 736 DFMRALDVVQTVLEPLVLRRTKDMKTPDGEPLVLLPPKQIEIVNVELSETERDVYNYIFN 795
Query: 645 DSLKKFKAFADAGTVNQNYANILLMLLRLRQACDHPLLVKEYDF--DSVGKISGEMAKRL 702
+ + F +AGTV + + I +LRLRQ+C HP+LV+ D D V +
Sbjct: 796 KAKRTFSQNVEAGTVMKAFTTIFAQILRLRQSCCHPILVRNRDIVADEV-EAGAAADAAA 854
Query: 703 PRDMLIDLLSRLETSSAI---------------------------CCVC-SDPPEDSVVT 734
+DL S + + +A+ C +C +P D VT
Sbjct: 855 GLADDMDLESLITSFTAVTDKASKESNQTFGAHALEQIRDEAENECPLCFEEPMNDQTVT 914
Query: 735 MCGHVFCYQCASEYITGDDNMCPAPRCKEQLGADVVFSKTTLKNCVSDDGGGSPTDSPFA 794
C H C +C +YI + PRC +K L V D
Sbjct: 915 GCWHSACKKCLLDYIKHQTDKAEVPRC---FSCREPINKRDLFEVVRHDD---------- 961
Query: 795 DKSGILDNEYISSKIRTVLDILHTQCELNTKCSIVEIHDLAGSNGSSAVHSKSPIEGPIK 854
D++ +S K R L + +N + V +A + A+ + P +K
Sbjct: 962 ------DSDMMSKKPRISLQ----RVGVNASSAKV----VALMSELRALRREHP---KMK 1004
Query: 855 SIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDREQITVMLMSLKA 914
S+VFSQ+T L L+E +L + I++ RLDG+M+ AR + +F T+++ T++L+SL+A
Sbjct: 1005 SVVFSQFTSFLSLIEPALTRANIKFLRLDGSMAQKARAAVLNEF-TEKKGFTILLLSLRA 1063
Query: 915 GNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRILKLQ 974
G +GLN+ +A V ++D WW+ E QA+DR HR+GQ V V R ++++VE+R+LK+Q
Sbjct: 1064 GGVGLNLTSAGRVFMMDPWWSFAVEAQAIDRVHRMGQEAEVQVKRFVVKESVEERMLKVQ 1123
Query: 975 DDKRKMVASAFG 986
+++K +A++ G
Sbjct: 1124 -ERKKFIATSLG 1134
>sp|Q6FY76|RAD5_CANGA DNA repair protein RAD5 OS=Candida glabrata (strain ATCC 2001 / CBS
138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=RAD5 PE=3 SV=1
Length = 1151
Score = 285 bits (728), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 220/756 (29%), Positives = 348/756 (46%), Gaps = 161/756 (21%)
Query: 298 GGILADDQGLGKTISIIALIQMQRSLQSKSKTEVLGNQKTEALNLDDDDDNGNAGLDKVK 357
GGIL+D+ GLGKTIS ++L+ M R + ++ L +Q++ L+ DD
Sbjct: 508 GGILSDEMGLGKTISALSLVLM-RPKDEHTTSQSLFHQESSNLSSDD------------- 553
Query: 358 ETGESDDIKPVPEVSTSTRSFSRRRPAAGTLVVCPASVLRQWARELEDKVPDKAALSVLI 417
V E+ RS++ + TL++ P S+L QW E DKV + A L+ +
Sbjct: 554 ----------VIEIKEPERSYAYK----TTLIIVPMSLLTQWRDEF-DKVNNNAGLTCEL 598
Query: 418 YHGGSRTKDPVELAKYD----VVLTTYSIVTNEVPKQPSVDEEEADEKNGETYGLSSEFS 473
Y+GG+ + L K VVLTTY IV NE K K+G
Sbjct: 599 YYGGNVSSLKSLLIKRKNPPTVVLTTYGIVQNEWTKL---------SKDG---------- 639
Query: 474 VNKKRKKISNVSKRGKKGKKGNVNSSIDYGCGPLAKVGWFRVVLDEAQTIKNHRTQVARA 533
+N+ G+ + + +FR++LDE TI+N T ++A
Sbjct: 640 --------TNIRSLGR--------------TSGIFSIEFFRIILDEGHTIRNKSTITSKA 677
Query: 534 CCSLRAKRRWCLSGTPIQNSIDDLYSYFRFLKYDPYAVYKSFYSTIKIPI-SRNSLHGYK 592
L +K RW L+GTPI N +DDLYS +FLK +P++ + I P RN +
Sbjct: 678 VLELSSKYRWILTGTPIINRLDDLYSLVKFLKLEPWSQIGYWKQFITNPFEERNFKQAFD 737
Query: 593 KLQAVLRAIMLRRTKGTF-IDGQPIINLPPKTISLTKVDFSKEEWAFYKKLESDSLKKFK 651
+ A++ ++LRRTK DG P++ LPPK I + K+ SK++ Y++ + K F+
Sbjct: 738 VVNAIMEPVLLRRTKQMKDTDGNPLVQLPPKEIVIEKLQLSKKQKLIYEEFLQRAEKTFR 797
Query: 652 AFADAGTVNQNYANILLMLLRLRQAC-------------------DHPLLVKEYDFDSVG 692
+ +G + + Y+ IL+ +LRLRQ C ++ L+ + D ++
Sbjct: 798 SGLQSGDLLKKYSTILVHILRLRQVCCDSNLIGTLDENDEDLSSGNNKLITESVDVKTLI 857
Query: 693 KISGEMAKRLP---RDMLIDLLSRLETS--------SAICCVCSDPPEDS---VVTMCGH 738
+ E +P D L L+ +E C +C+ P +S VVT C H
Sbjct: 858 PDTEEEEDEVPPFENDELDKLIESVEAKFIDSNQLIPVECSICTAEPIESSSAVVTECEH 917
Query: 739 VFCYQCASEYITGDDNMC---PAPRCKEQLGADVVFSKTTLKNCVSDDGGGSPTDSPFAD 795
VFC +C EY P C+ + L C++ + G
Sbjct: 918 VFCKECLEEYGNFQKEKSLQQKCPNCRRDIN---------LNRCLAFEKGS--------- 959
Query: 796 KSGILDNEYISSKIRTVLDILHTQCELNTKCSIVEIHDLAGSNGSSAVHSKSPIEGPIKS 855
GIL + K R +LN I + L S+ V
Sbjct: 960 -DGILKLIHFDRKERP--------AKLN--ALIRHLQQLQDSSAGEQV------------ 996
Query: 856 IVFSQWTRMLDLVENSLNQ----HCIQYRRLDGTMSLPARDRAVKDFNT-DREQITVMLM 910
+VFSQ++ LD++E+ LN+ + ++ + DG +SL R ++DF D V+L+
Sbjct: 997 VVFSQFSSYLDILESQLNEVYSSNKLKVYKFDGRLSLKERTAVLEDFKVKDYAVQKVLLL 1056
Query: 911 SLKAGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRI 970
SLKAG +GLN+ AS+ ++D WW+P+ EDQA+DR HRIGQT V V R I ++E+++
Sbjct: 1057 SLKAGGVGLNLTCASYAFMMDPWWSPSMEDQAIDRIHRIGQTNSVKVIRFVIDGSIEEKM 1116
Query: 971 LKLQDDKRKMVASAFGEDQGGGTASRLTVEDLRYLF 1006
L++QD KR + A D+ R +E+++ LF
Sbjct: 1117 LRIQDRKRTL-GEAMDTDEDERRKRR--IEEIQMLF 1149
>sp|P32849|RAD5_YEAST DNA repair protein RAD5 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RAD5 PE=1 SV=1
Length = 1169
Score = 273 bits (698), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 213/759 (28%), Positives = 346/759 (45%), Gaps = 167/759 (22%)
Query: 298 GGILADDQGLGKTISIIALIQMQRSLQSKSKTEVLGNQKTEALNLDDDDDNGNAGLDKVK 357
GGIL+D+ GLGKT++ +L+ L+ D D + L ++
Sbjct: 527 GGILSDEMGLGKTVAAYSLV----------------------LSCPHDSDVVDKKLFDIE 564
Query: 358 ETGESDDIKPVPEVSTSTRSFSRRRPAAG--TLVVCPASVLRQWARELEDKVPDKAALSV 415
T SD++ + ++P A TL+V P S+L QW+ E K + +
Sbjct: 565 NTAVSDNLPSTWQ--------DNKKPYASKTTLIVVPMSLLTQWSNEF-TKANNSPDMYH 615
Query: 416 LIYHGGS----RTKDPVELAKYDVVLTTYSIVTNEVPKQPSVDEEEADEKNGETYGLSSE 471
+Y+GG+ +T VVLTTY IV NE K
Sbjct: 616 EVYYGGNVSSLKTLLTKTKTPPTVVLTTYGIVQNEWTKHS-------------------- 655
Query: 472 FSVNKKRKKISNVSKRGKKGKKGNVNSSIDYGCGPLAKVGWFRVVLDEAQTIKNHRTQVA 531
KG+ + + +I G L V ++R+++DE I+N T +
Sbjct: 656 ------------------KGRMTDEDVNISSG---LFSVNFYRIIIDEGHNIRNRTTVTS 694
Query: 532 RACCSLRAKRRWCLSGTPIQNSIDDLYSYFRFLKYDPYA---VYKSFYSTIKIPI-SRNS 587
+A +L+ K +W L+GTPI N +DDLYS +FL+ DP+ +K+F ST P S+N
Sbjct: 695 KAVMALQGKCKWVLTGTPIINRLDDLYSLVKFLELDPWRQINYWKTFVST---PFESKNY 751
Query: 588 LHGYKKLQAVLRAIMLRRTKGTF-IDGQPIINLPPKTISLTKVDFSKEEWAFYKKLESDS 646
+ + A+L ++LRRTK DG+P++ LPPK + + ++ FSK + YK L +
Sbjct: 752 KQAFDVVNAILEPVLLRRTKQMKDKDGKPLVELPPKEVVIKRLPFSKSQDLLYKFLLDKA 811
Query: 647 LKKFKAFADAGTVNQNYANILLMLLRLRQACDHPLLVKEYD------------------- 687
K+ G + + Y+ IL+ +LRLRQ C HP L+ D
Sbjct: 812 EVSVKSGIARGDLLKKYSTILVHILRLRQVCCHPGLIGSQDENDEDLSKNNKLVTEQTVE 871
Query: 688 FDSVGKISGE-MAKRLPRDMLIDLLSRLET--------SSAICCVCSDPPED---SVVTM 735
DS+ ++ E ++ L ++ RL+ S C +C+ P D ++ T
Sbjct: 872 LDSLMRVVSERFDNSFSKEELDAMIQRLKVKYPDNKSFQSLECSICTTEPMDLDKALFTE 931
Query: 736 CGHVFCYQCASEYITGDDNM---CPAPRCKEQLGADVVFSKTTLKNCVSDDGGGSPTDSP 792
CGH FC +C EYI ++ P C+ Q+ A + + ++ + P
Sbjct: 932 CGHSFCEKCLFEYIEFQNSKNLGLKCPNCRNQIDACRLLALVQ-----TNSNSKNLEFKP 986
Query: 793 FADKSGILDNEYISSKIRTVLDILHTQCELNTKCSIVEIHDLAGSNGSSAVHSKSPIEGP 852
++ S SSKI +L E+ L S+ V
Sbjct: 987 YSPASK-------SSKITALLK---------------ELQLLQDSSAGEQV--------- 1015
Query: 853 IKSIVFSQWTRMLDLVENSL----NQHCIQYRRLDGTMSLPARDRAVKDFNT-DREQITV 907
++FSQ++ LD++E L ++ + + DG +SL R + DF D + +
Sbjct: 1016 ---VIFSQFSTYLDILEKELTHTFSKDVAKIYKFDGRLSLKERTSVLADFAVKDYSRQKI 1072
Query: 908 MLMSLKAGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVE 967
+L+SLKAG +GLN+ ASH ++D WW+P+ EDQA+DR HRIGQT V V R I+D++E
Sbjct: 1073 LLLSLKAGGVGLNLTCASHAYMMDPWWSPSMEDQAIDRLHRIGQTNSVKVMRFIIQDSIE 1132
Query: 968 DRILKLQDDKRKMVASAFGEDQGGGTASRLTVEDLRYLF 1006
+++L++Q+ KR + A D+ R +E+++ LF
Sbjct: 1133 EKMLRIQEKKR-TIGEAMDTDEDERRKRR--IEEIQMLF 1168
>sp|Q753V5|RAD5_ASHGO DNA repair protein RAD5 OS=Ashbya gossypii (strain ATCC 10895 / CBS
109.51 / FGSC 9923 / NRRL Y-1056) GN=RAD5 PE=3 SV=2
Length = 1085
Score = 265 bits (677), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 217/730 (29%), Positives = 329/730 (45%), Gaps = 170/730 (23%)
Query: 298 GGILADDQGLGKTISIIALIQMQRSLQSKSKTEVLGNQKTEALNLDDDDDNGNAGLDKVK 357
GGILAD+ GLGKTISI+ALI M + S +K + Q+ + G+ L
Sbjct: 455 GGILADEMGLGKTISILALITM---VPSDTKHLLTTAQEKPPV--------GHLSL---- 499
Query: 358 ETGESDDIKPVPEVSTSTRSFSRRRPAAGTLVVCPASVLRQWARELEDKVPDKAALSVLI 417
E G S +KP A+ TL+V P S+L QW E +V D L +
Sbjct: 500 ELGIST-VKPYT--------------ASTTLIVVPMSLLPQWRNEFV-RVNDGNGLYCEV 543
Query: 418 YHGGSRTKDPVELAKY----DVVLTTYSIVTNEVPKQPSVDEEEADEKNGETYGLSSEFS 473
Y+ G+ + L K VVLTTY +V E K D E ++E GL S
Sbjct: 544 YYAGNVSNLRTLLVKQKSPPSVVLTTYGVVQTEWSKLQQFDYEASNE------GLFS--- 594
Query: 474 VNKKRKKISNVSKRGKKGKKGNVNSSIDYGCGPLAKVGWFRVVLDEAQTIKNHRTQVARA 533
V +FR++LDE I+N T+ ++A
Sbjct: 595 ------------------------------------VEFFRIILDEGHNIRNRTTKTSKA 618
Query: 534 CCSLRAKRRWCLSGTPIQNSIDDLYSYFRFLKYDPYAVYKSFYSTIKIPISRNSL-HGYK 592
+L ++R+W L+GTPI N +DDL+S +F+ ++P+ + + P + +
Sbjct: 619 VMALTSRRKWVLTGTPIMNRLDDLFSLIKFMNFEPWCKIDYWRQFVSDPFEKKDYSSALE 678
Query: 593 KLQAVLRAIMLRRTKGTF-IDGQPIINLPPKTISLTKVDFSKEEWAFYKKLESDSLKKFK 651
+QAV+ I+LRRTK DG P++ LPPK + + + FS E YK S + K
Sbjct: 679 VIQAVMGPILLRRTKNMKDEDGNPLVQLPPKEVVIEMIRFSDTEAGLYKYFLSKAEHSVK 738
Query: 652 AFADAGTVNQNYANILLMLLRLRQACDHPLLVKEYD-----------FDSVGKIS----- 695
G + + Y+ ILL +LRLRQ C H L+ D + + IS
Sbjct: 739 ESLARGDLLKKYSTILLHILRLRQVCCHFKLLGSQDENDEDLKNMKLINDIPDISTLLGE 798
Query: 696 -----GEMAKRLPRDMLIDLLSRLETSSAI----CCVCS----DPPEDSVVTMCGHVFCY 742
G ++ +P D + D ++ S A+ C +C+ P V T CGH FC
Sbjct: 799 DSQSPGSSSEGMP-DFIEDFKTKYPNSDALKDLECSICTCEAISPLTSVVFTRCGHPFCE 857
Query: 743 QCASEYI-----TGDDNMCPAPRCKEQLGADVVFSKTTLKNCVSDDGGGSPTDSPFADKS 797
C EYI G + +CP R V S+ LK +D G P++
Sbjct: 858 SCLLEYIQFQNKKGSETICPNCRA-------AVESRYLLK---LEDINGKLEPVPYS--- 904
Query: 798 GILDNEYISSKIRTVLDILHTQCELNTKCSIVEIHDLAGSNGSSAVHSKSPIEGPIKSIV 857
N SSKI + I + L ++ + V +V
Sbjct: 905 ----NTKKSSKIVAL---------------IRHLKHLQDTSANEQV------------VV 933
Query: 858 FSQWTRMLDLVENSLNQH-----CIQYRRLDGTMSLPARDRAVKDFNTDRE--QITVMLM 910
FSQ++ LD++EN L Q C Y + DG + L R + F T++ ++ V+L+
Sbjct: 934 FSQFSSYLDILENELRQSFASDICEIY-KFDGRLDLKERSNVLAKF-TEKSLVKMKVLLL 991
Query: 911 SLKAGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRI 970
SLKAG +GLN+ ASH ++D WW+P EDQA+DR HRIGQ+ V + R + +++E+++
Sbjct: 992 SLKAGGVGLNLTCASHAFIMDPWWSPGMEDQAMDRIHRIGQSNTVKIYRFIVENSIEEKM 1051
Query: 971 LKLQDDKRKM 980
L++Q+ KR +
Sbjct: 1052 LRIQEKKRSL 1061
>sp|Q6CJM4|RAD5_KLULA DNA repair protein RAD5 OS=Kluyveromyces lactis (strain ATCC 8585 /
CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
GN=RAD5 PE=3 SV=1
Length = 1114
Score = 256 bits (654), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 211/757 (27%), Positives = 336/757 (44%), Gaps = 170/757 (22%)
Query: 298 GGILADDQGLGKTISIIALIQMQRSLQSKSKTEVLGNQKTEALNLDDDDDNGNAGLDKVK 357
GGILAD+ GLGKTIS +ALI S + ++ +K +K
Sbjct: 479 GGILADEMGLGKTISALALI-CTASYDEAHEKKIESTKKP-----------------SMK 520
Query: 358 ETGESDDIKPVPEVSTSTRSFSRRRPAAGTLVVCPASVLRQWARELEDKVPDKAALSVLI 417
E D P+ +++ R TL+V P S+L QW E E D +
Sbjct: 521 EMSSQVDSSPLRHSQHKHDTYAYR----TTLIVVPMSLLNQWQSEFEKANKDLKKRCEIY 576
Query: 418 YHGGSRTKDPVELAKY-------DVVLTTYSIVTNEVPKQPSVDEEEADEKNGETYGLSS 470
Y G+ KD L Y V++TTY I+ +E YG +S
Sbjct: 577 Y--GNNIKD---LRAYVLGPNAPSVIITTYGIIQSE-------------------YGRTS 612
Query: 471 EFSVNKKRKKISNVSKRGKKGKKGNVNSSIDYGCGPLAKVGWFRVVLDEAQTIKNHRTQV 530
L V +FR++LDE TI+N T+
Sbjct: 613 ---------------------------------TSGLFNVVFFRIILDEGHTIRNRSTRT 639
Query: 531 ARACCSLRAKRRWCLSGTPIQNSIDDLYSYFRFLKYDPYAVYKSFYSTIKIPISR-NSLH 589
++A +LR+ R+W L+GTPI N +DDL+S +FL +P++ + + +P + N
Sbjct: 640 SKAVIALRSSRKWILTGTPIINRLDDLFSLVQFLNLEPWSHINYWKRYVSVPFEKGNYAQ 699
Query: 590 GYKKLQAVLRAIMLRRTKGTF-IDGQPIINLPPKTISLTKVDFSKEEWAFYKKLESDSLK 648
+ + AVL ++LRRTK +DG+P+++LPPK + + K+ S E Y+ + D+
Sbjct: 700 AFDVINAVLEPVLLRRTKNMKDVDGKPLVSLPPKEVIVEKLQLSSSEKRVYQSMLEDAEN 759
Query: 649 KFKAFADAGTVNQNYANILLMLLRLRQACDHPLLVKEY------DFDSVGKISGEMAKRL 702
K G + +NY NIL+ +LRLRQ C H L+K+ D + + + ++ L
Sbjct: 760 SVKEGLAKGDLLKNYTNILVHILRLRQVCCHLDLLKKTPDLGDPDLEDLENSTQNISSIL 819
Query: 703 -PRDM----------LIDLLSR----LETSS--------AICCV-CSDPPEDSVVTMCGH 738
P+++ +D LS + ++S AIC C +P +T C H
Sbjct: 820 MPKNIKSPKSSISQDKLDALSANFRDIHSASEQLPSFECAICTTECIEPLSAVSITECLH 879
Query: 739 VFCYQCASEYITGDDNM---CPAPRCKEQLG-ADVVFSKTTLKNCVSDDGGGSPTDSPFA 794
FC C +EYI N P C+ + A+V+ K P D+
Sbjct: 880 TFCEPCLAEYIEFQQNKKLSINCPYCRMPISEANVLKLK-------------EPIDAERG 926
Query: 795 DKSGILDNEYISSKIRTVLDILHTQCELNTKCSIVEIHDLAGSNGSSAVHSKSPIEGPIK 854
+ + + S+KI+ +L L + SP E +
Sbjct: 927 YELISFHSHFQSTKIKALLRHL------------------------KQIQETSPGE---Q 959
Query: 855 SIVFSQWTRMLDLVENSLNQHC----IQYRRLDGTMSLPARDRAVKDF-NTDREQITVML 909
IVFSQ++ LD++E L H + + DG + + R R ++ F + D I ++L
Sbjct: 960 IIVFSQFSSFLDILEIELRSHLPRDQVIIYKFDGRLDMKERTRILEQFHDKDLSCIKLLL 1019
Query: 910 MSLKAGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDR 969
+SLK G +GLN+ AS ++D WW+P EDQA+DR HRIGQ + V V R I ++VE++
Sbjct: 1020 LSLKTGGVGLNLTCASRAFMMDPWWSPGMEDQAIDRIHRIGQQQTVKVVRFIIDNSVEEK 1079
Query: 970 ILKLQDDKRKMVASAFGEDQGGGTASRLTVEDLRYLF 1006
+L++Q+ KR M+ D+ R +E+++ LF
Sbjct: 1080 MLRIQERKR-MLGDIVEGDEAERRQKR--IEEIQMLF 1113
>sp|Q6BIP2|RAD5_DEBHA DNA repair protein RAD5 OS=Debaryomyces hansenii (strain ATCC 36239 /
CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=RAD5 PE=3
SV=2
Length = 1190
Score = 254 bits (650), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 201/770 (26%), Positives = 347/770 (45%), Gaps = 182/770 (23%)
Query: 298 GGILADDQGLGKTISIIALIQMQRSLQSKSKTEVLGNQKTEALNLDDDDDNGNAGLDKVK 357
GGILAD+ GLGKTIS +ALI + +D +
Sbjct: 539 GGILADEMGLGKTISTLALI-------------------------------NSVPIDVMF 567
Query: 358 ETGESDDIKPVPEVSTSTRSFSRRRPAAGTLVVCPASVLRQWARELEDKVPDKAALSVLI 417
E + + K + T TL++ P S+L QW +E DK + + I
Sbjct: 568 EENKELEDKTIYASKT-------------TLIIVPMSLLSQWQKEF-DKANNNSNHKCFI 613
Query: 418 YHGGSRTKD--PVELAKYD----VVLTTYSIVTNEVPKQPSVDEEEADEKNGETYGLSSE 471
Y+G S T D PV K V++TTY V NE +
Sbjct: 614 YYGDSATTDLSPVLCNKKKDIPIVMITTYGTVLNEFTR---------------------- 651
Query: 472 FSVNKKRKKISNVSKRGKKGKKGNVNSSIDYGCGPLAKVGWFRVVLDEAQTIKNHRTQVA 531
ISN +R KG + L V +FR+VLDE I+N + +
Sbjct: 652 ---------ISN--RRDAKGFLPKIG---------LFSVKFFRIVLDEGHNIRNRTAKTS 691
Query: 532 RACCSLRAKRRWCLSGTPIQNSIDDLYSYFRFLKYDPYAVYKSFYSTIKIPISRNSL-HG 590
+A + + R+W L+GTP+ N +DDLYS +FL+ +P++ + + + + +P + +
Sbjct: 692 KAIYEILSNRKWVLTGTPVINRLDDLYSLVKFLELEPWSNFSYWKTFVTLPFEQRKISQT 751
Query: 591 YKKLQAVLRAIMLRRTKGTF-IDGQPIINLPPKTISLTKVDFSKEEWAFYKKLESDSLKK 649
++++L I +RRTK +G+P++ LPPK + + +V F++ E Y ++ + +
Sbjct: 752 LDVVKSILEPIFIRRTKNMKQSNGKPLVELPPKEVVIEEVKFNEVEEKLYNWFKARASQS 811
Query: 650 FKAFADAGTVNQNYANILLMLLRLRQACDHPLLV-----KEYDF--------------DS 690
FK +G + + Y+ IL +LRLRQ C H LV E + DS
Sbjct: 812 FKDGIKSGDLFKKYSQILTHILRLRQVCCHVDLVGSANEMEQELVDPNTDLSEANGESDS 871
Query: 691 VGKISGEMAKRLP--------------RDMLIDLLSRLETSSAICCVCSDPP---EDSVV 733
+ ++ + R ++ L +++ + C +C+ P + +
Sbjct: 872 ISMVNNVLDSYHADNNHDEKFKNNTEVRSVMFPLYEKIDLKESECSICTQSPIPLGEMAL 931
Query: 734 TMCGHVFCYQCASEYITGDDN-----MCPAPRCKEQLGADVVFS----KTTLKNCV--SD 782
T CGH +C C E+ + +C P C+E + +F T++K +
Sbjct: 932 TPCGHAYCLNCVLEHFDFQEKNSQKPLC--PNCREPISKYKIFKLRHRDTSVKEIRFHTK 989
Query: 783 DGGGSPTDSPFADKSGILDNEYISSKIRTVLDILHTQCELNTKCSIVEIHDLAGSNGSSA 842
P+ + F + + D SSKI QC + N
Sbjct: 990 QEMEDPSQN-FKFQLYLYDPTKTSSKI---------QCLI---------------NHLKI 1024
Query: 843 VHSKSPIEGPIKSIVFSQWTRMLDLVENSL----NQHCIQYRRLDGTMSLPARDRAVKDF 898
+ +SP E + +VFSQ++ LD++EN L + + Y + DG +++ R + +++F
Sbjct: 1025 LKEQSPNE---QVVVFSQFSSYLDIIENELKIQISNDFVVY-KFDGRLNMNERQKILENF 1080
Query: 899 NTDREQ--ITVMLMSLKAGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVT 956
++ + + + ++L+SLKAG +GLN+ AS ++D WW+P+ EDQA+DR HRIGQ V
Sbjct: 1081 SSQKHENKVMILLLSLKAGGVGLNLTTASRAFMMDPWWSPSVEDQAIDRLHRIGQNSNVK 1140
Query: 957 VTRLTIRDTVEDRILKLQDDKRKMVASAFGEDQGGGTASRLTVEDLRYLF 1006
VTR + D++E ++LK+Q +++K + A G ++ R +E+++ LF
Sbjct: 1141 VTRFIMADSIETKMLKIQ-ERKKQIGEAVGAEEDERRKRR--IEEMQILF 1187
>sp|Q5ACX1|RAD5_CANAL DNA repair protein RAD5 OS=Candida albicans (strain SC5314 / ATCC
MYA-2876) GN=RAD5 PE=3 SV=1
Length = 1084
Score = 246 bits (628), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 189/721 (26%), Positives = 321/721 (44%), Gaps = 157/721 (21%)
Query: 298 GGILADDQGLGKTISIIALIQMQRSLQSKSKTEVLGNQKTEALNLDDDDDNGNAGLDKVK 357
GGILAD+ GLGKTI+ +AL+ + D
Sbjct: 458 GGILADEMGLGKTIATLALV-------------------------------NSVPYDNF- 485
Query: 358 ETGESDDIKPVPEVSTSTRSFSRRRPAAGTLVVCPASVLRQWARELEDKVPDKAALSVLI 417
P P+ S R ++ + TL+V P S+L QW E E + + L
Sbjct: 486 ---------PEPK---SDRPYA----SQTTLIVVPMSLLFQWKSEFEKCNNNSRHVCRLH 529
Query: 418 YHGGSRTKDPVELAKYD------VVLTTYSIVTNEVPKQPSVDEEEADEKNGETYGLSSE 471
Y T L D V++TTY V NE +
Sbjct: 530 YGEDQETNLAWSLCNPDNSKIPIVMITTYGTVLNEFTR---------------------- 567
Query: 472 FSVNKKRKKISNVSKRGKKGKKGNVNSSIDYGCGPLAKVGWFRVVLDEAQTIKNHRTQVA 531
++K+R + K G L V +FR++LDE I+N T+ A
Sbjct: 568 --LSKRRNSKGELPKVG------------------LYSVKFFRIILDEGHNIRNRNTKTA 607
Query: 532 RACCSLRAKRRWCLSGTPIQNSIDDLYSYFRFLKYDPYAVYKSFYSTIKIPISRNSL-HG 590
++ L++ R+W L+GTPI N +DDLYS +FL+ DP+ + + + + +P + +
Sbjct: 608 KSVYELQSSRKWILTGTPIVNRLDDLYSLTKFLELDPWNNFSYWKTFVTLPFEQKKISQT 667
Query: 591 YKKLQAVLRAIMLRRTKGTFIDGQPIINLPPKTISLTKVDFSKEEWAFYKKLESDSLKKF 650
++++L I LRRTK +G+P++ LP K + + ++ F+ +E Y+ + + F
Sbjct: 668 LDVVKSILEPIFLRRTKSQKKNGKPLVELPAKEVVIEQIKFNDDEEKLYQWFKDRAYASF 727
Query: 651 KAFADAGTVNQNYANILLMLLRLRQACDHPLLV---KEYDFDSVGKISGE-MAKRLP--- 703
+G + + Y IL +LRLRQ C H L+ E D + + E M K L
Sbjct: 728 AEGIKSGQLLRRYTQILTHILRLRQVCCHVDLIGGAHEMDDEIIEAEQDEDMRKFLTSIK 787
Query: 704 ------------RDMLIDLLSRL--ETSSAICCVCSDPPEDSVVTMCGHVFCYQCASEYI 749
++ + +L ++ E +IC P + VVT C H FC C E++
Sbjct: 788 ENQIRFANDTDVKEKMYNLYGKIKEENECSICTQVPIPYSEMVVTPCAHTFCLSCILEHL 847
Query: 750 -----TGDDNMCPAPRCKEQLGADVVFSKTTLKNCVSDDGGGSPTDSP-FADKSGILDNE 803
+ +C P C+ + +F ++ + D+P ++ + + D
Sbjct: 848 DFQKELKKEKLC--PNCRSPISKYQLFRIRNQPTKGNEIRFHTQKDAPDYSFQLYLYDPN 905
Query: 804 YISSKIRTVLDILHTQCELNTKCSIVEIHDLAGSNGSSAVHSKSPIEGPIKSIVFSQWTR 863
SSKI+ ++ L A+HS+SP K IVFSQ++
Sbjct: 906 RSSSKIQALVRHL------------------------KALHSQSPNS---KVIVFSQFSS 938
Query: 864 MLDLVENSLNQHCIQY--RRLDGTMSLPARDRAVKDFNTDRE--QITVMLMSLKAGNLGL 919
LD++++ L ++ + DG +++ R + ++ FN E ++ ++L+SLKAG +GL
Sbjct: 939 YLDIIQSELKLASEEFIVFKFDGRLNMNDRTKLLESFNQPLEDGKVAILLLSLKAGGVGL 998
Query: 920 NMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRILKLQDDKRK 979
N+ AS ++D WW+P+ EDQA+DR HRIGQ V V R + +++E ++LK+Q+ K++
Sbjct: 999 NLTTASRAYMMDPWWSPSIEDQAIDRIHRIGQNETVKVVRFIMENSIETKMLKIQERKKQ 1058
Query: 980 M 980
+
Sbjct: 1059 I 1059
>sp|Q6C2R8|RAD5_YARLI DNA repair protein RAD5 OS=Yarrowia lipolytica (strain CLIB 122 / E
150) GN=RAD5 PE=3 SV=1
Length = 1025
Score = 233 bits (594), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 214/771 (27%), Positives = 334/771 (43%), Gaps = 117/771 (15%)
Query: 255 EDLNQPKVEATLPDGLLSVNLLKHQKIALAWMLQKETRSLHCLGGILADDQGLGKTISII 314
ED+ QP+ E +G + L ++QK L WM+ +ET DD G I
Sbjct: 351 EDVEQPETEV---EGF-PLELRRYQKQGLTWMISRETEVSEYFDN---DDSG-----PIN 398
Query: 315 ALIQMQRSLQSKSKTEVLGNQKTEALNLDDDDDNGNAGLDKVKETGESDDIKPVPEVSTS 374
L S K V + L + + + G+ +D++ +ST
Sbjct: 399 PLWTKVDFPGSDEKFYVNFSSGALTLKFPKQERSFSGGI-------LADEMGLGKTISTL 451
Query: 375 TRSFSRRRPAAGTLVVCPASVLRQWARELEDKVPDKAALSVLIYHGGSRTKDPVELAKY- 433
+ R R TLVV P S+L QW +E E + LS +YH D EL K
Sbjct: 452 AMVY-RDRHVGCTLVVAPMSLLWQWEQECE-----RVGLSTYVYHEKGADIDLDELFKTY 505
Query: 434 --DVVLTTYSIVTNEVPKQPSVDEEEADEKNGETYGLSSEFSVNKKRKKISNVSKRGKKG 491
++++T+Y + + YG R IS S +
Sbjct: 506 SPNILITSYHTLVSH-------------------YGQIKALGGGLDRNVISETSSHERPK 546
Query: 492 KKGNVNSSIDYGCGPLAKVGWFRVVLDEAQTIKNHRTQVARACCSLRAKRRWCLSGTPIQ 551
+ + R+VLDEA IKN T A+ACC LRA +W L+GTPI
Sbjct: 547 ---------------IFTKHFHRIVLDEAHVIKNRNTVSAKACCLLRATNKWALTGTPIH 591
Query: 552 NSIDDLYSYFRFLKYDPYAVYKSFYSTIKIPISRNSL-HGYKKLQAVLRAIMLRRTKGTF 610
N ++DL+S +FL P+ + + + I +P + +Q +L I+LRRTK
Sbjct: 592 NRLEDLFSILKFLGAAPWNDFIYWRNFITLPFQEGKIVSALMTVQCILEPIVLRRTKNMK 651
Query: 611 -IDGQPIINLPPKTISLTKVDFSKEEWAFYKKLESDSLKKFKAFADAGTVNQNYANILLM 669
DG P++ LP KTI++ KV + +E Y + + + + + V +NY NIL
Sbjct: 652 QADGSPLVVLPKKTINIEKVALTDQERVIYSYVLARAQTSLQKSEASEAVGRNYLNILTQ 711
Query: 670 LLRLRQACDHPLLV--KEYDFDSVGKISGEMAKRLPRDMLIDL-----LSRLETSSAICC 722
+LRLRQ+C P L+ E + + ++ E + + M+ S E SS I
Sbjct: 712 ILRLRQSCCDPALILRPEAEVPTDEQLQIEENESQLKSMIQQYNDDTQTSACEYSSEIIA 771
Query: 723 VCSD---PPEDSVVTMCGHVFCYQCASEYITGDDNMCPAPRCKEQLGADVVFSKTTLKNC 779
D PPE C CA + + C C + L +V F ++ +
Sbjct: 772 QLQDQSAPPE-----------CPICAEDVTKLAISKCLHMGCVDCLADNVRFQESKKQTP 820
Query: 780 VSDDGGGSPTDSPFADKSGILDNEYISSKIRTVLDILHTQCELNTKCSIVEIHDLAGSNG 839
V I + + DI + C + + L+
Sbjct: 821 VC----------------------CICRQPAALKDIFEVE-RTGEDCKDIRLKKLSDRPR 857
Query: 840 SS---AVHSK-SPIEGPIKSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAV 895
SS A+ SK + KS+VFSQ+T LD+++ L + IQ R DGT+S R +
Sbjct: 858 SSKLVALVSKLKQLPKDAKSVVFSQFTSYLDIIQTELRREKIQAFRFDGTLSRQQRTDVL 917
Query: 896 KDFNTDREQITVMLMSLKAGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPV 955
K F + +V+L+SLK G +GLN+V A+H ++D WW E QA+DR HR+GQT+ V
Sbjct: 918 KAFGLSKG--SVLLISLKTGGVGLNLVTANHAFIMDPWWTFAQEAQAIDRIHRMGQTKDV 975
Query: 956 TVTRLTIRDTVEDRILKLQDDKRKMVASAFGEDQGGGTASRLTVEDLRYLF 1006
VTR + ++VE+++LK+Q K ++A G + A R +E+++ L
Sbjct: 976 HVTRFIVENSVEEKMLKIQQQK-MVLAGTLGMSEQEQKAQR--IENIKTLL 1023
>sp|Q5NC05|TTF2_MOUSE Transcription termination factor 2 OS=Mus musculus GN=Ttf2 PE=1
SV=2
Length = 1138
Score = 191 bits (485), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 135/450 (30%), Positives = 215/450 (47%), Gaps = 117/450 (26%)
Query: 271 LSVNLLKHQKIALAWMLQKETRSLHCLGGILADDQGLGKTISIIALIQMQRSLQSKSKTE 330
L V LL HQK ALAW+L +E++ GGILADD GLGKT+++IALI +++ Q KSK
Sbjct: 542 LKVPLLLHQKQALAWLLWRESQKPQ--GGILADDMGLGKTLTMIALILTKKN-QQKSK-- 596
Query: 331 VLGNQKTEALNLDDDDDNGNAGLDKVKETGESDDIKPVPEVSTSTRS-FSRRRPAAGTLV 389
E + +PV +S + S F+ ++GTL+
Sbjct: 597 ------------------------------EKERSEPVTWLSKNDSSVFT----SSGTLI 622
Query: 390 VCPASVLRQWARELEDKVPDKAALSVLIYHGGSRTKDPVELAKYDVVLTTYSIVTNEVPK 449
VCPAS++ W E+E +V L + +YHG +R++ L+ YD+V+TTYS++ E+P
Sbjct: 623 VCPASLIHHWKNEVEKRVTSNR-LRIYLYHGPNRSRHAKVLSTYDIVITTYSLLAKEIP- 680
Query: 450 QPSVDEEEADEKNGETYGLSSEFSVNKKRKKISNVSKRGKKGKKGNVNSSIDYGCGPLAK 509
++ GE G N S++ PL +
Sbjct: 681 --------TTKQEGEVPG----------------------------ANLSVEGTSAPLLQ 704
Query: 510 VGWFRVVLDEAQTIKNHRTQVARACCSLRAKRRWCLSGTPIQNSIDDLYSYFRFLKYDPY 569
V W R++LDEA +KN R Q + A C L+A+ RW ++GTPIQN++ D+YS +FL+ P+
Sbjct: 705 VVWARIILDEAHNVKNPRVQTSIAVCKLQAQARWAVTGTPIQNNLLDMYSLMKFLRCSPF 764
Query: 570 AVYKSFYSTIKIPISRNSLHGYKKLQAVLRAIMLRRTKGTF-IDGQPIINLPPKTISLTK 628
+S K + S+ G ++L + ++++LRRTK G+P++ LP + L +
Sbjct: 765 ----DEFSLWKSQVDNGSMKGGERLSILTKSLLLRRTKDQLDSTGKPLVALPARRCQLHR 820
Query: 629 VDFSKEEWAFYKKLESDSLKKFKAFAD------------------------AGTVNQ--- 661
+ S++E A Y + S +++ +V+Q
Sbjct: 821 LKLSEDERAVYDIFLARSRSALQSYLKRQEGRGSHHGRSPDNPFSRVAQEFGSSVSQGCP 880
Query: 662 -------NYANILLMLLRLRQACDHPLLVK 684
+ ++L LLRLRQ C H L+K
Sbjct: 881 AADSQRPSTVHVLSQLLRLRQCCCHLSLLK 910
Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 96/158 (60%), Gaps = 3/158 (1%)
Query: 851 GPIKSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDREQITVMLM 910
G KS++ SQWT ML +V L ++ + Y +DG+++ R V+ FN + VML+
Sbjct: 984 GSQKSVIVSQWTSMLQVVALHLKKNRLTYATIDGSVNPKQRMDLVEAFNHS-QGPQVMLI 1042
Query: 911 SLKAGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRI 970
SL AG +GLN+ +H+ LLD+ WNP+ EDQA DR +R+GQ + V + R TVE++I
Sbjct: 1043 SLLAGGVGLNLTGGNHLFLLDMHWNPSLEDQACDRIYRVGQKKDVVIHRFVCEGTVEEKI 1102
Query: 971 LKLQDDKRKMVASAFGEDQGGGTASRLTVEDLRYLFMV 1008
L+LQ+ K+ + + G ++LT+ DL+ LF +
Sbjct: 1103 LQLQEKKKDLAKQVLSGSE--GPVTKLTLADLKILFGI 1138
>sp|P34739|TTF2_DROME Transcription termination factor 2 OS=Drosophila melanogaster
GN=lds PE=1 SV=2
Length = 1061
Score = 185 bits (470), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 148/474 (31%), Positives = 212/474 (44%), Gaps = 125/474 (26%)
Query: 251 QAALEDLNQPKVEATLPDGLLSVNLLKHQKIALAWMLQKETRSLHCLGGILADDQGLGKT 310
+LEDL P+V A P GL V+L+ HQK ALAWM +E + GGILADD GLGKT
Sbjct: 416 HVSLEDLPGPEVLAEDPVGL-KVSLMNHQKHALAWMSWRERKLPR--GGILADDMGLGKT 472
Query: 311 ISIIALIQMQRSLQSKSKTEVLGNQKTEALNLDDDDDNGNAGLDKVKETGESDDIKPVPE 370
+++I+ + ++ Q S+ G ++ + +DD + + K G D
Sbjct: 473 LTMISSVLACKNGQEMSE----GKDESSDSDSEDDKNKKRKSVTGWKSKGRKD------- 521
Query: 371 VSTSTRSFSRRRPAAGTLVVCPASVLRQWARELEDKVPDKAALSVLIYHGGSRTKDPVEL 430
+RR GTLVVCPAS+LRQW E+E KV + L+V ++HG +R L
Sbjct: 522 --------TRR---GGTLVVCPASLLRQWESEVESKV-SRQKLTVCVHHGNNRETKGKYL 569
Query: 431 AKYDVVLTTYSIVTNEVPKQPSVDEEEADEKNGETYGLSSEFSVNKKRKKISNVSKRGKK 490
YD+V+TTY IV E LS+ F V
Sbjct: 570 RDYDIVVTTYQIVAR------------------EHKSLSAVFGVK--------------- 596
Query: 491 GKKGNVNSSIDYGCGPLAKVGWFRVVLDEAQTIKNHRTQVARACCSLRAKRRWCLSGTPI 550
W R++LDEA ++NH++Q + A C LR K RW L+GTPI
Sbjct: 597 ---------------------WRRIILDEAHVVRNHKSQSSLAVCDLRGKYRWALTGTPI 635
Query: 551 QNSIDDLYSYFRFLKYDPYAVYKSFYSTIKIPISRNSLHGYKKLQAVLRAIMLRRTKGTF 610
QN D+Y+ +FL+ P+ T K I S G +L +++++MLRRTK
Sbjct: 636 QNKELDVYALLKFLRCSPF----DDLHTWKKWIDNKSAGGQNRLNLLMKSLMLRRTKAQL 691
Query: 611 IDGQPIINLPPKTISLTKVDFSKEEWAFYKKLESDSLKKFKAF----------------A 654
+ +LP K + L ++ KEE Y+ + + S F F A
Sbjct: 692 QSDGKLNSLPNKELRLIEISLDKEEMNVYQTVMTYSRTLFAQFLHQRAERETDFNYRSDA 751
Query: 655 DAGTVNQ-------------NYA------------NILLMLLRLRQACDHPLLV 683
+ T NQ +A +IL++LLRLRQ C HP L+
Sbjct: 752 NKPTYNQIKDPNGAYYKMHEKFARMAGSKKEVKSHDILVLLLRLRQICCHPGLI 805
Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 96/153 (62%), Gaps = 3/153 (1%)
Query: 854 KSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDREQITVMLMSLK 913
K+IV SQWT +LD++ + L++ + L+GT+ + R V +FN Q V+L+SL
Sbjct: 910 KAIVVSQWTSVLDILRDHLSKDGVATLSLNGTIPVKNRQDIVNEFNDRNNQKRVLLLSLT 969
Query: 914 AGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRILKL 973
AG +GLN++ A+H++LLDL WNP E QA DR +R+GQ + V + + DTVE RI L
Sbjct: 970 AGGVGLNLIGANHLLLLDLHWNPQLEAQAQDRIYRVGQKKNVIIYKFMCVDTVEQRIKGL 1029
Query: 974 QDDKRKMVASAFGEDQGGGTASRLTVEDLRYLF 1006
QD K + A G G +S+LT++DL+ LF
Sbjct: 1030 QDKKLDL---ADGVLTGAKVSSKLTIDDLKGLF 1059
>sp|Q9UNY4|TTF2_HUMAN Transcription termination factor 2 OS=Homo sapiens GN=TTF2 PE=1
SV=2
Length = 1162
Score = 181 bits (460), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 147/516 (28%), Positives = 229/516 (44%), Gaps = 124/516 (24%)
Query: 210 PSSLMHGKSVSMTQFGGPSDLAYRSGSADERAVGGDERLIYQA------ALEDLNQPKVE 263
P + KS GG S YR G ++ V ++ +A +LE V
Sbjct: 502 PVGSLELKSACQVTAGGSSQ-CYR-GHTNQDHVHAVWKITSEAIGQLHRSLESCPGETVV 559
Query: 264 ATLPDGLLSVNLLKHQKIALAWMLQKETRSLHCLGGILADDQGLGKTISIIALIQMQRSL 323
A P GL V LL HQK ALAW+L +E++ GGILADD GLGKT+++IALI L
Sbjct: 560 AEDPAGL-KVPLLLHQKQALAWLLWRESQKPQ--GGILADDMGLGKTLTMIALI-----L 611
Query: 324 QSKSKTEVLGNQKTEALNLDDDDDNGNAGLDKVKETGESDDIKPVPEVSTSTRSFSRRRP 383
K++ + +K+ AL DD+ + F+
Sbjct: 612 TQKNQEKKEEKEKSTALTWLSKDDSCD---------------------------FT---- 640
Query: 384 AAGTLVVCPASVLRQWARELEDKVPDKAALSVLIYHGGSRTKDPVELAKYDVVLTTYSIV 443
+ GTL++CPAS++ W E+E +V + L V +YHG +R L+ YD+V+TTYS+V
Sbjct: 641 SHGTLIICPASLIHHWKNEVEKRV-NSNKLRVYLYHGPNRDSRARVLSTYDIVITTYSLV 699
Query: 444 TNEVPKQPSVDEEEADEKNGETYGLSSEFSVNKKRKKISNVSKRGKKGKKGNVNSSIDYG 503
E+P NK+ +I N +++
Sbjct: 700 AKEIP-------------------------TNKQEAEIPGA------------NLNVEGT 722
Query: 504 CGPLAKVGWFRVVLDEAQTIKNHRTQVARACCSLRAKRRWCLSGTPIQNSIDDLYSYFRF 563
PL ++ W R++LDEA +KN R Q + A C L+A RW ++GTPIQN++ D+YS +F
Sbjct: 723 STPLLRIAWARIILDEAHNVKNPRVQTSIAVCKLQACARWAVTGTPIQNNLLDMYSLLKF 782
Query: 564 LKYDPYAVYKSFYSTIKIPISRNSLHGYKKLQAVLRAIMLRRTKGTF-IDGQPIINLPPK 622
L+ P+ + + S + S G ++L + ++++LRRTK G+P++ LP +
Sbjct: 783 LRCSPFDEFNLWRSQ----VDNGSKKGGERLSILTKSLLLRRTKDQLDSTGRPLVILPQR 838
Query: 623 TISLTKVDFSKEEWAFYKKLESDSLKKFKAFAD--------------------------- 655
L + S++E Y + S +++
Sbjct: 839 KFQLHHLKLSEDEETVYNVFFARSRSALQSYLKRHESRGNQSGRSPNNPFSRVALEFGSE 898
Query: 656 -------AGTVNQNYANILLMLLRLRQACDHPLLVK 684
A + + +IL LLRLRQ C H L+K
Sbjct: 899 EPRHSEAADSPRSSTVHILSQLLRLRQCCCHLSLLK 934
Score = 127 bits (318), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 98/158 (62%), Gaps = 9/158 (5%)
Query: 854 KSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDREQITVMLMSLK 913
KS++ SQWT ML +V L +H + Y +DG+++ R V+ FN R VML+SL
Sbjct: 1011 KSVIVSQWTNMLKVVALHLKKHGLTYATIDGSVNPKQRMDLVEAFNHSRGP-QVMLISLL 1069
Query: 914 AGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRILKL 973
AG +GLN+ +H+ LLD+ WNP+ EDQA DR +R+GQ + V + R TVE++IL+L
Sbjct: 1070 AGGVGLNLTGGNHLFLLDMHWNPSLEDQACDRIYRVGQQKDVVIHRFVCEGTVEEKILQL 1129
Query: 974 QDDKR---KMVASAFGEDQGGGTASRLTVEDLRYLFMV 1008
Q+ K+ K V S GE + ++LT+ DLR LF +
Sbjct: 1130 QEKKKDLAKQVLSGSGE-----SVTKLTLADLRVLFGI 1162
>sp|Q4PGG5|RAD5_USTMA DNA repair protein RAD5 OS=Ustilago maydis (strain 521 / FGSC 9021)
GN=RAD5 PE=3 SV=1
Length = 1387
Score = 168 bits (425), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 122/397 (30%), Positives = 184/397 (46%), Gaps = 63/397 (15%)
Query: 298 GGILADDQGLGKTISIIALIQMQRSLQSKSKTEVLGNQKTEALNLDDDDDNGNAGLDKVK 357
GGILAD+ GLGKTI + +L+ R T G + +N D G K
Sbjct: 653 GGILADEMGLGKTIMVASLLHANR-------TSDPGEESEGEINAVD----AAEGDVSTK 701
Query: 358 ETGESDDIKPVPEVSTSTRSFSRRRP--------AAGTLVVCPASVLRQWARELEDKVPD 409
G + + ST S +R+ +LVV P S++ QW EL +
Sbjct: 702 RKGSAKQTSLASAFAASTSSVDQRKALLKASVSKGKASLVVAPMSLIGQWRDELI-RASA 760
Query: 410 KAALSVLIYHGGSRTK--DPVELAKYDVVLTTYSIVTNEVPKQPSVDEEEADEKNGETYG 467
+L+ ++Y+ ++ +E K DVV+T+Y + E
Sbjct: 761 PGSLTPVLYYADTKGDLLAQLESGKVDVVITSYGTLVTEY-------------------- 800
Query: 468 LSSEFSVNKKRKKISNVSKRGKKGKKGNVNSSIDYGCGPLAKVGWFRVVLDEAQTIKNHR 527
R+ + G N + S+ PL + W RV+LDEA IKN
Sbjct: 801 ----------RRFLDG-------GGASNRHLSV---SAPLYCIDWLRVILDEAHNIKNRS 840
Query: 528 TQVARACCSLRAKRRWCLSGTPIQNSIDDLYSYFRFLKYDPYAVYKSFYSTIKIPISRNS 587
T ARACC L ++RRW L+GTPI N + DL+S +FL+ +P+ + F S + P S
Sbjct: 841 TMNARACCDLVSRRRWALTGTPIINRLTDLFSLLKFLRVEPWGDFSFFNSFVCKPFQAKS 900
Query: 588 LHGYKKLQAVLRAIMLRRTKGTF-IDGQPIINLPPKTISLTKVDFSKEEWAFYKKLESDS 646
+Q +L +++LRR K DG+PI+ LPPKTI + +++FS+ E Y + +
Sbjct: 901 TKALDVVQVILESVLLRREKKMKDKDGKPIVELPPKTIVVKELEFSELERRIYDNVYRRA 960
Query: 647 LKKFKAFADAGTVNQNYANILLMLLRLRQACDHPLLV 683
+F + GTV +N + I +L+RLRQA HP LV
Sbjct: 961 YLQFASLKANGTVTRNLSVIFSVLMRLRQAVCHPSLV 997
Score = 149 bits (376), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 152/327 (46%), Gaps = 39/327 (11%)
Query: 682 LVKEYDFDSVGKISGEMAKRLPRDMLIDLLSRLETSSAI-----------CCVCSDPPED 730
LV ++ D G+ + + + + L+ + A C +C + +
Sbjct: 1058 LVAQFQLDEAGEAGDDSTESYTKATVERLIGEMHGDQATVPPVVSDGENECPICLEESQI 1117
Query: 731 SVVTM--CGHVFCYQCASEYI-----TGDDNMCPAPRCKEQLGADVVFSKTTLKNCVSDD 783
S + C H C C +Y+ GD CP R D++ + T +
Sbjct: 1118 SPCYLPRCMHSACKACLVDYLGQCKQKGDQGACPTCRKGPVQETDLIEAIRTRPATRAAS 1177
Query: 784 GGGSPTDSPFADKSGILDNEYISSKIRTVLDILHTQCELNTKCSIVEIHDLAGSNGSSAV 843
GG SPTD P + + +V +++ + L T + + S +
Sbjct: 1178 GGASPTDRPGK-----------ACTLTSVPSVIYVRNNLRTSTKLSAL--------ISHL 1218
Query: 844 HSKSPIEGPIKSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDR- 902
++ E K ++FSQ+T LDL+E L ++ + RLDG+ RD+ V +F +
Sbjct: 1219 NTLRATEAAFKGVIFSQFTSFLDLIEPVLTRYRFHFLRLDGSTPQKVRDKLVLEFQSPSP 1278
Query: 903 -EQITVMLMSLKAGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLT 961
+ + L+SLKAG +GLN+ AA+ + LLD WWN + E+QA+DR HR GQT PV+V R
Sbjct: 1279 TNHVVLFLISLKAGGVGLNLTAANKIWLLDFWWNSSIENQAIDRIHRFGQTSPVSVFRYI 1338
Query: 962 IRDTVEDRILKLQDDKRKMVASAFGED 988
I+D++EDRIL +Q K ++ A D
Sbjct: 1339 IKDSIEDRILLIQKRKDMLIKHALNTD 1365
>sp|P47264|Y018_MYCGE Uncharacterized ATP-dependent helicase MG018 OS=Mycoplasma genitalium
(strain ATCC 33530 / G-37 / NCTC 10195) GN=MG018 PE=3
SV=3
Length = 1031
Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 116/202 (57%), Gaps = 8/202 (3%)
Query: 810 RTVLDILHTQCELNTKCSIVEIHDLAGSNGSSAVHSK-----SPIEGPIKSIVFSQWTRM 864
+ L+IL +L CS+V+ +D+ +S ++ +E K I+F+Q+ +
Sbjct: 832 KNALNILSLILKLRHICSLVKDNDVNDFEDNSKANAALNIIYEALENKRKVILFTQFLDV 891
Query: 865 LDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDREQITVMLMSLKAGNLGLNMVAA 924
+D + +L I + DG ++ R+ ++ FN+ +E VML SLKAG +G+N+ AA
Sbjct: 892 IDCFKQTLKNQKIDHLVFDGRKTVKNRNTIIQKFNSAKEP-CVMLASLKAGGVGINLTAA 950
Query: 925 SHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRILKLQDDKRKMVASA 984
VI D+WWN E+QA DRAHRIGQ++ V V R+ ++T+E+R+ ++Q+ K+++V
Sbjct: 951 EVVIHFDVWWNSAVENQATDRAHRIGQSKTVQVYRIIAKNTIEERVCQVQNQKQELVKKT 1010
Query: 985 FGEDQGGGTASRLTVEDLRYLF 1006
ED + L+ E+L LF
Sbjct: 1011 LVEDVNFFKS--LSHEELLKLF 1030
Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 90/173 (52%), Gaps = 16/173 (9%)
Query: 515 VVLDEAQTIKNHRTQVARACCSLRAKRRWCLSGTPIQNSIDDLYSYFRFLKYDPYAVYKS 574
VV+DEAQ IKN + V +A ++ L+GTPI+N + DL+S F F+ + K
Sbjct: 699 VVIDEAQGIKNENSTVTKAAKKIKGNFCLALTGTPIENRLLDLWSCFDFVLPNFLGNKKQ 758
Query: 575 FYSTIKIPISRNSLHGYKKLQAVLRAIMLRRTKGTFIDGQPIINLPPKTISLTKVDFSKE 634
F + + +N ++KL +LRRTK + + LP K I+ V+ S+E
Sbjct: 759 F--SDQFEKEKND-ESFQKLMKKTSPFILRRTK-----NKVLKELPKKIITDIYVELSEE 810
Query: 635 EWAFYKKLESDSLKKFKAFADAGTVNQNYANILLMLLRLRQACDHPLLVKEYD 687
Y K ++D LK+ K +DA +N NIL ++L+LR C LVK+ D
Sbjct: 811 HQKLYDKQKTDGLKEIKE-SDA----KNALNILSLILKLRHICS---LVKDND 855
Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 274 NLLKHQKIALAWMLQKETRSLHCLGGILADDQGLGKTISII 314
NL K+QK + W+ E GGILAD+ GLGKT +I
Sbjct: 577 NLRKYQKEGVKWIRALEDNQF---GGILADEMGLGKTAQVI 614
>sp|A7EQA8|INO80_SCLS1 Putative DNA helicase INO80 OS=Sclerotinia sclerotiorum (strain ATCC
18683 / 1980 / Ss-1) GN=INO80 PE=3 SV=1
Length = 1707
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/145 (45%), Positives = 90/145 (62%), Gaps = 5/145 (3%)
Query: 850 EGPIKSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDREQITVML 909
EG + +++ Q TRM+DL+E L +Y RLDG+ L R V DF T R +I + L
Sbjct: 1436 EGGHRVLLYFQMTRMIDLMEEYLTYRNYKYLRLDGSTKLEDRRDTVHDFQT-RPEIFIFL 1494
Query: 910 MSLKAGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDR 969
+S +AG LG+N+ +A VI D WNPT + QA+DRAHR+GQTR VTV R+ R T+E+R
Sbjct: 1495 LSTRAGGLGINLTSADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRMITRGTIEER 1554
Query: 970 ILK--LQDDKRKMVASAFGEDQGGG 992
I K LQ ++ + V G GGG
Sbjct: 1555 IRKRALQKEEVQKVVMTGG--AGGG 1577
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 124/305 (40%), Gaps = 62/305 (20%)
Query: 388 LVVCPASVLRQWARELEDKVPDKAALSVLIYHGGSRTKDPVELAKYDVVLTTYSIVTNEV 447
LVV PAS L W +E+ VP L VL Y G + + V +D TY+
Sbjct: 894 LVVAPASTLHNWQQEITKFVP---RLKVLPYWGTAADRK-VLRKFWDRKHITYT------ 943
Query: 448 PKQPSVDEEEADEKNGETYGLSSEFSVNKKRKKISNVSKRGKKGKKGNVNSSIDYGCGPL 507
++ + L + + + V S + Y
Sbjct: 944 -------------EDAPFHVLVTSYQL---------------------VVSDVAY----F 965
Query: 508 AKVGWFRVVLDEAQTIKNHRTQVARACCSLRAKRRWCLSGTPIQNSIDDLYSYFRFLK-- 565
K+ W ++LDEAQ IK+ ++ ++ + R L+GTPIQN++ +L++ F+
Sbjct: 966 QKMKWQYMILDEAQAIKSSQSSRWKSLLGFHCRNRLLLTGTPIQNNMQELWALLHFIMPS 1025
Query: 566 -YDPYAVYKSFYST-IKIPISRNSL---HGYKKLQAVLRAIMLRRTKGTFIDGQPIINLP 620
+D + + ++S I+ N+ K+L +L+ MLRR K L
Sbjct: 1026 LFDSHDEFSEWFSKDIESHAQSNTKLNEDQLKRLHMILKPFMLRRVKKHVQK-----ELG 1080
Query: 621 PKTISLTKVDFSKEEWAFYKKLESD-SLKKFKAFADAGTVNQNYANILLMLLRLRQACDH 679
K D + + A+Y L + S+ A G N + ++ ++++ R+ C+H
Sbjct: 1081 DKIEEDIFCDLTYRQRAYYSNLRNQISIMDLIEKATIGDDN-DTGTLMNLVMQFRKVCNH 1139
Query: 680 PLLVK 684
P L +
Sbjct: 1140 PDLFE 1144
Score = 35.0 bits (79), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 11/62 (17%)
Query: 256 DLNQPKVEATLPDGLLSVNLLKHQKIALAWMLQKETRSLHCLGGILADDQGLGKTISIIA 315
D+ QPK +L L ++Q L W++ + ++ GILAD+ GLGKT+ I+
Sbjct: 830 DIEQPK--------MLQAQLKEYQLKGLNWLVNLYEQGIN---GILADEMGLGKTVQSIS 878
Query: 316 LI 317
++
Sbjct: 879 VM 880
>sp|Q9XFH4|DDM1_ARATH ATP-dependent DNA helicase DDM1 OS=Arabidopsis thaliana GN=DDM1
PE=1 SV=1
Length = 764
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 87/136 (63%)
Query: 854 KSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDREQITVMLMSLK 913
K ++FSQWT++LD+++ ++ + R+DG++ L R R +KDF+ ++ ++ L+S +
Sbjct: 542 KVLIFSQWTKLLDIMDYYFSEKGFEVCRIDGSVKLDERRRQIKDFSDEKSSCSIFLLSTR 601
Query: 914 AGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRILKL 973
AG LG+N+ AA IL D WNP + QA+DR HRIGQT+PV V RL+ ++E R+LK
Sbjct: 602 AGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTAQSIETRVLKR 661
Query: 974 QDDKRKMVASAFGEDQ 989
K K+ G+ Q
Sbjct: 662 AYSKLKLEHVVIGQGQ 677
Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 133/331 (40%), Gaps = 77/331 (23%)
Query: 388 LVVCPASVLRQWARELEDKVPDKAALSVLIYHGGSRTKDPVELAKYDVVLTTYSIVTNEV 447
LV+ P S L W E+ P +++ +IYHG +D EL + + T
Sbjct: 254 LVIAPLSTLSNWFNEIARFTP---SINAIIYHGDKNQRD--ELRRKHMPKTVG------- 301
Query: 448 PKQPSVDEEEADEKNGETYGLSSEFSVNKKRKKISNVSKRGKKGKKGNVNSSIDYGCGPL 507
PK P V S E ++N ++ + +
Sbjct: 302 PKFPIVI-------------TSYEVAMNDAKRILRHYP---------------------- 326
Query: 508 AKVGWFRVVLDEAQTIKNHRTQVARACCSLRAKRRWCLSGTPIQNSIDDLYSYFRFLKYD 567
W VV+DE +KNH+ ++ R L+ + L+GTP+QN++ +L+S F+ D
Sbjct: 327 ----WKYVVIDEGHRLKNHKCKLLRELKHLKMDNKLLLTGTPLQNNLSELWSLLNFILPD 382
Query: 568 PYAVYKSFYSTIKIPISRNSLHGYK------------KLQAVLRAIMLRRTKGTFIDGQP 615
+ + F S +N K KL +LR +LRR K D +
Sbjct: 383 IFTSHDEFESWFDFS-EKNKNEATKEEEEKRRAQVVSKLHGILRPFILRRMK---CDVE- 437
Query: 616 IINLPPKTISLTKVDFSKEEWAFYKKLESDSLKKFKAFADAGTVNQNYANIL-LMLLRLR 674
++LP K + + + F + L +++L+ + Q + L ++++LR
Sbjct: 438 -LSLPRKKEIIMYATMTDHQKKFQEHLVNNTLEAH--LGENAIRGQGWKGKLNNLVIQLR 494
Query: 675 QACDHPLLVK-----EYDFDSVGKISGEMAK 700
+ C+HP L++ Y + V +I G+ K
Sbjct: 495 KNCNHPDLLQGQIDGSYLYPPVEEIVGQCGK 525
>sp|A1CZE5|INO80_NEOFI Putative DNA helicase ino80 OS=Neosartorya fischeri (strain ATCC 1020
/ DSM 3700 / FGSC A1164 / NRRL 181) GN=ino80 PE=3 SV=1
Length = 1708
Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 87/142 (61%), Gaps = 3/142 (2%)
Query: 851 GPIKSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDREQITVMLM 910
G + +++ Q TRM+DL+E L +Y RLDG+ L R V DF R +I V L+
Sbjct: 1433 GGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQ-QRPEIFVFLL 1491
Query: 911 SLKAGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRI 970
S +AG LG+N+ AA VI D WNPT + QA+DRAHR+GQTR VTV RL R T+E+RI
Sbjct: 1492 STRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITRGTIEERI 1551
Query: 971 LK--LQDDKRKMVASAFGEDQG 990
K LQ ++ + V + G G
Sbjct: 1552 RKRALQKEEVQRVVISGGAAGG 1573
Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 124/310 (40%), Gaps = 72/310 (23%)
Query: 388 LVVCPASVLRQWARELEDKVPDKAALSVLIYHGGSRTKDPVELAKY-DVVLTTYSIVTNE 446
LV+ PAS L W +E+ VPD + VL Y G + KD L K+ D TY+
Sbjct: 886 LVIAPASTLHNWQQEITKFVPD---IKVLPYWGSA--KDRKVLRKFWDRKHITYT----- 935
Query: 447 VPKQPSVDEEEADEKNGETYGLSSEFSVNKKRKKISNVSKRGKKGKKGNVNSSIDYGCGP 506
K E + L + + + +
Sbjct: 936 --------------KESEFHVLVTSYQL-------------------------VVLDSQY 956
Query: 507 LAKVGWFRVVLDEAQTIKNHRTQVARACCSLRAKRRWCLSGTPIQNSIDDLYSYFRFLK- 565
KV W ++LDEAQ IK+ ++ + + R L+GTPIQN++ +L++ F+
Sbjct: 957 FQKVKWQYMILDEAQAIKSSQSSRWKNLLGFHCRNRLLLTGTPIQNNMQELWALLHFIMP 1016
Query: 566 --YDPYAVYKSFYST-IKIPISRNSL---HGYKKLQAVLRAIMLRRTKGTFIDGQPIINL 619
+D + + ++S I+ N+ ++L +L+ MLRR K L
Sbjct: 1017 TLFDSHDEFSEWFSKDIESHAQSNTKLNEDQLRRLHMILKPFMLRRVKKHVQQ-----EL 1071
Query: 620 PPKTISLTKVDFSKEEWAFYKKLES-----DSLKKFKAFADAGTVNQNYANILLMLLRLR 674
K D + + A+Y L + D ++K +A + ++ ++++ R
Sbjct: 1072 GDKVEKDVFCDLTYRQRAYYANLRNRVSIMDLIEKAAVGDEADST-----TLMNLVMQFR 1126
Query: 675 QACDHPLLVK 684
+ C+HP L +
Sbjct: 1127 KVCNHPDLFE 1136
Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 11/62 (17%)
Query: 256 DLNQPKVEATLPDGLLSVNLLKHQKIALAWMLQKETRSLHCLGGILADDQGLGKTISIIA 315
+++QPK +L+ L ++Q L W++ + ++ GILAD+ GLGKTI I+
Sbjct: 822 EISQPK--------MLTAKLKEYQLKGLNWLVNLYEQGIN---GILADEMGLGKTIQSIS 870
Query: 316 LI 317
++
Sbjct: 871 VM 872
>sp|A2R9H9|INO80_ASPNC Putative DNA helicase ino80 OS=Aspergillus niger (strain CBS 513.88 /
FGSC A1513) GN=ino80 PE=3 SV=1
Length = 1697
Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 78/122 (63%), Gaps = 1/122 (0%)
Query: 851 GPIKSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDREQITVMLM 910
G + +++ Q TRM+DL+E L +Y RLDG+ L R V DF R +I V L+
Sbjct: 1421 GGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQ-QRPEIFVFLL 1479
Query: 911 SLKAGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRI 970
S +AG LG+N+ AA VI D WNPT + QA+DRAHR+GQTR VTV RL R T+E+RI
Sbjct: 1480 STRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITRGTIEERI 1539
Query: 971 LK 972
K
Sbjct: 1540 RK 1541
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 127/316 (40%), Gaps = 72/316 (22%)
Query: 388 LVVCPASVLRQWARELEDKVPDKAALSVLIYHGGSRTKDPVELAKY-DVVLTTYSIVTNE 446
LV+ PAS L W +E+ VPD + VL Y G + KD L K+ D TY+
Sbjct: 876 LVIAPASTLHNWQQEITKFVPD---IKVLPYWGSA--KDRKILRKFWDRKHITYT----- 925
Query: 447 VPKQPSVDEEEADEKNGETYGLSSEFSVNKKRKKISNVSKRGKKGKKGNVNSSIDYGCGP 506
K E + L + + + V Y
Sbjct: 926 --------------KESEFHVLVTSYQL---------------------VVLDAQY---- 946
Query: 507 LAKVGWFRVVLDEAQTIKNHRTQVARACCSLRAKRRWCLSGTPIQNSIDDLYSYFRFLK- 565
KV W ++LDEAQ IK+ ++ + + R L+GTPIQN++ +L++ F+
Sbjct: 947 FQKVKWQYMILDEAQAIKSSQSSRWKNLLGFHCRNRLLLTGTPIQNNMQELWALLHFIMP 1006
Query: 566 --YDPYAVYKSFYST-IKIPISRNSL---HGYKKLQAVLRAIMLRRTKGTFIDGQPIINL 619
+D + + ++S I+ N+ ++L +L+ MLRR K L
Sbjct: 1007 TLFDSHDEFSEWFSKDIESHAQSNTKLNEDQLRRLHMILKPFMLRRVKKHVQQ-----EL 1061
Query: 620 PPKTISLTKVDFSKEEWAFYKKLES-----DSLKKFKAFADAGTVNQNYANILLMLLRLR 674
K D + + A+Y L + D ++K +A + ++ ++++ R
Sbjct: 1062 GDKVEKDIFCDLTYRQRAYYTNLRNRVSIMDLIEKAAVGDEADST-----TLMNLVMQFR 1116
Query: 675 QACDHPLLVKEYDFDS 690
+ C+HP L + + S
Sbjct: 1117 KVCNHPDLFERAETKS 1132
Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
Query: 262 VEATLPDGLLSVNLLKHQKIALAWMLQKETRSLHCLGGILADDQGLGKTISIIALI 317
+E + P+ +L+ L ++Q L W++ + ++ GILAD+ GLGKTI I+++
Sbjct: 811 IEISQPN-MLTAKLKEYQLKGLNWLVNLYEQGIN---GILADEMGLGKTIQSISVM 862
>sp|P75093|Y020_MYCPN Uncharacterized ATP-dependent helicase MPN_020 OS=Mycoplasma
pneumoniae (strain ATCC 29342 / M129) GN=MPN_020 PE=3
SV=1
Length = 1030
Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 96/158 (60%), Gaps = 3/158 (1%)
Query: 849 IEGPIKSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDREQITVM 908
IE K I+F+Q+ ++D +++ + I+Y DG S +R ++ FN + V+
Sbjct: 875 IENQRKIILFTQFIDVIDHFKDTFKEQGIEYFIFDGRKSPKSRHSIIEKFNNAKNP-CVL 933
Query: 909 LMSLKAGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVED 968
L SLKAG +G+N+ AA VI D+WWN E+QA DRAHRIGQ + V V R+ ++T+E+
Sbjct: 934 LASLKAGGVGINLTAAEVVIHFDVWWNTAVENQATDRAHRIGQKKTVQVYRIIAKNTIEE 993
Query: 969 RILKLQDDKRKMVASAFGEDQGGGTASRLTVEDLRYLF 1006
R+ ++Q +K+++V+ ED + LT E+L LF
Sbjct: 994 RVCQVQAEKQELVSKTLVEDVNFFES--LTNEELLRLF 1029
Score = 56.6 bits (135), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 76/174 (43%), Gaps = 13/174 (7%)
Query: 507 LAKVGWFRVVLDEAQTIKNHRTQVARACCSLRAKRRWCLSGTPIQNSIDDLYSYFRFLKY 566
+ K + VV+DEAQ IKN + + +A ++ L+GTPI+N + DL+S F F+
Sbjct: 691 ITKQRFHYVVIDEAQGIKNDSSSITKAAKKVKGNFCLALTGTPIENRLLDLWSCFDFVLP 750
Query: 567 DPYAVYKSFYSTIKIPISRNSLHGYKKLQAVLRAIMLRRTKGTFIDGQPIINLPPKTISL 626
K F + + S H L +LRRTK + LP K +
Sbjct: 751 SFLGNKKQFTDQFEKEKTDQSFHL---LMQRTSPFILRRTKSKVLK-----ELPNKITTD 802
Query: 627 TKVDFSKEEWAFYKKLESDSLKKFKAFADAGTVNQNYANILLMLLRLRQACDHP 680
V+ + Y++ L++ K D + NIL ++L+LR C P
Sbjct: 803 IYVELNPMHQKLYEEERDRGLEEIKQIQDKSSF-----NILTLILKLRHLCSLP 851
>sp|Q4WTV7|INO80_ASPFU Putative DNA helicase ino80 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=ino80 PE=3
SV=1
Length = 1708
Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/137 (46%), Positives = 85/137 (62%), Gaps = 3/137 (2%)
Query: 856 IVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDREQITVMLMSLKAG 915
+++ Q TRM+DL+E L +Y RLDG+ L R V DF R +I V L+S +AG
Sbjct: 1438 LLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQ-QRPEIFVFLLSTRAG 1496
Query: 916 NLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRILK--L 973
LG+N+ AA VI D WNPT + QA+DRAHR+GQTR VTV RL R T+E+RI K L
Sbjct: 1497 GLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITRGTIEERIRKRAL 1556
Query: 974 QDDKRKMVASAFGEDQG 990
Q ++ + V + G G
Sbjct: 1557 QKEEVQRVVISGGAAGG 1573
Score = 60.5 bits (145), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 124/310 (40%), Gaps = 72/310 (23%)
Query: 388 LVVCPASVLRQWARELEDKVPDKAALSVLIYHGGSRTKDPVELAKY-DVVLTTYSIVTNE 446
LV+ PAS L W +E+ VPD + VL Y G + KD L K+ D TY+
Sbjct: 886 LVIAPASTLHNWQQEITKFVPD---IKVLPYWGSA--KDRKVLRKFWDRKHITYT----- 935
Query: 447 VPKQPSVDEEEADEKNGETYGLSSEFSVNKKRKKISNVSKRGKKGKKGNVNSSIDYGCGP 506
K E + L + + + +
Sbjct: 936 --------------KESEFHVLVTSYQL-------------------------VVLDSQY 956
Query: 507 LAKVGWFRVVLDEAQTIKNHRTQVARACCSLRAKRRWCLSGTPIQNSIDDLYSYFRFLK- 565
KV W ++LDEAQ IK+ ++ + + R L+GTPIQN++ +L++ F+
Sbjct: 957 FQKVKWQYMILDEAQAIKSSQSSRWKNLLGFHCRNRLLLTGTPIQNNMQELWALLHFIMP 1016
Query: 566 --YDPYAVYKSFYST-IKIPISRNSL---HGYKKLQAVLRAIMLRRTKGTFIDGQPIINL 619
+D + + ++S I+ N+ ++L +L+ MLRR K L
Sbjct: 1017 TLFDSHDEFSEWFSKDIESHAQSNTKLNEDQLRRLHMILKPFMLRRVKKHVQQ-----EL 1071
Query: 620 PPKTISLTKVDFSKEEWAFYKKLES-----DSLKKFKAFADAGTVNQNYANILLMLLRLR 674
K D + + A+Y L + D ++K +A + ++ ++++ R
Sbjct: 1072 GDKVEKDVFCDLTYRQRAYYTNLRNRVSIMDLIEKAAVGDEADST-----TLMNLVMQFR 1126
Query: 675 QACDHPLLVK 684
+ C+HP L +
Sbjct: 1127 KVCNHPDLFE 1136
Score = 35.0 bits (79), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 11/62 (17%)
Query: 256 DLNQPKVEATLPDGLLSVNLLKHQKIALAWMLQKETRSLHCLGGILADDQGLGKTISIIA 315
+++QPK +L+ L ++Q L W++ + ++ GILAD+ GLGKTI I+
Sbjct: 822 EISQPK--------MLTAKLKEYQLKGLNWLVNLYEQGIN---GILADEMGLGKTIQSIS 870
Query: 316 LI 317
++
Sbjct: 871 VM 872
>sp|Q9VDY1|INO80_DROME Putative DNA helicase Ino80 OS=Drosophila melanogaster GN=Ino80 PE=1
SV=2
Length = 1638
Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/134 (45%), Positives = 87/134 (64%), Gaps = 4/134 (2%)
Query: 854 KSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDREQITVMLMSLK 913
+ +++SQ T+M+DL+E + +Y RLDG+ + AR V DF T R I V L+S +
Sbjct: 1174 RVLIYSQMTKMIDLLEEYMWHRKHRYMRLDGSSKISARRDMVADFQT-RADIFVFLLSTR 1232
Query: 914 AGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRILKL 973
AG LG+N+ AA VI D WNPT + QA+DRAHR+GQT+ VTV RL + T+E+RIL+
Sbjct: 1233 AGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQR 1292
Query: 974 QDDK---RKMVASA 984
+K ++MV S
Sbjct: 1293 AREKSEIQRMVISG 1306
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 124/311 (39%), Gaps = 65/311 (20%)
Query: 388 LVVCPASVLRQWARELEDKVPDKAALSVLIYHGGSRTKDPVELAKYDVVLTTYSIVTNEV 447
LV+ PAS L W +E+ VPD V+ Y G
Sbjct: 588 LVISPASTLHNWQQEMSRFVPD---FKVVPYWGS-------------------------- 618
Query: 448 PKQPSVDEEEADEKNGETYGLSSEFSVNKKRKKISNVSKRGKKGKKGNVNSSIDYGCGPL 507
P + + + D+K+ T S + + +S DY
Sbjct: 619 PAERKILRQFWDQKHLHTRDASFHVVITSYQLVVS------------------DYKY--F 658
Query: 508 AKVGWFRVVLDEAQTIKNHRTQVARACCSLRAKRRWCLSGTPIQNSIDDLYSYFRFLK-- 565
++ W +VLDEAQ IK+ +Q + + R LSGTPIQNS+ +L++ F+
Sbjct: 659 NRIKWQYMVLDEAQAIKSAASQRWKLLLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPT 718
Query: 566 -YDPYAVYKSFYSTIKIPISRNSL----HGYKKLQAVLRAIMLRRTK----GTFIDGQPI 616
+D + + ++S + N +L +L+ MLRR K D I
Sbjct: 719 LFDSHDEFNEWFSKDIESHAENKTGIDEKQISRLHMILKPFMLRRIKKDVENELSDKIEI 778
Query: 617 INLPPKTISLTKVDFSKEEWAFYKKLESDSLKKFKAFADAGTVNQNYANILLMLLRLRQA 676
+ P TI K+ + A +K+ + L + + + + + +N++ ++++ R+
Sbjct: 779 MVYCPLTIR-QKLLYR----ALKQKIRIEDLLHLTSGSTTTSSSSSASNLMNLVMQFRKV 833
Query: 677 CDHPLLVKEYD 687
C+HP L + D
Sbjct: 834 CNHPELFERRD 844
>sp|Q2UTQ9|INO80_ASPOR Putative DNA helicase ino80 OS=Aspergillus oryzae (strain ATCC 42149
/ RIB 40) GN=ino80 PE=3 SV=1
Length = 1444
Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 78/122 (63%), Gaps = 1/122 (0%)
Query: 851 GPIKSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDREQITVMLM 910
G + +++ Q TRM+DL+E L +Y RLDG+ L R V DF R +I V L+
Sbjct: 1231 GGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQ-QRPEIFVFLL 1289
Query: 911 SLKAGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRI 970
S +AG LG+N+ AA VI D WNPT + QA+DRAHR+GQTR VTV RL R T+E+RI
Sbjct: 1290 STRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITRGTIEERI 1349
Query: 971 LK 972
K
Sbjct: 1350 RK 1351
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 124/310 (40%), Gaps = 72/310 (23%)
Query: 388 LVVCPASVLRQWARELEDKVPDKAALSVLIYHGGSRTKDPVELAKY-DVVLTTYSIVTNE 446
LV+ PAS L W +E+ VPD + VL Y G + KD L K+ D TY+
Sbjct: 686 LVIAPASTLHNWQQEITKFVPD---IKVLPYWGSA--KDRKILRKFWDRKHITYT----- 735
Query: 447 VPKQPSVDEEEADEKNGETYGLSSEFSVNKKRKKISNVSKRGKKGKKGNVNSSIDYGCGP 506
K E + L + + + +
Sbjct: 736 --------------KESEFHVLVTSYQL-------------------------VVLDAQY 756
Query: 507 LAKVGWFRVVLDEAQTIKNHRTQVARACCSLRAKRRWCLSGTPIQNSIDDLYSYFRFLK- 565
KV W ++LDEAQ IK+ ++ + + R L+GTPIQN++ +L++ F+
Sbjct: 757 FQKVKWQYMILDEAQAIKSSQSSRWKNLLGFSCRNRLLLTGTPIQNNMQELWALLHFIMP 816
Query: 566 --YDPYAVYKSFYST-IKIPISRNSL---HGYKKLQAVLRAIMLRRTKGTFIDGQPIINL 619
+D + + ++S I+ N+ K+L +L+ MLRR K L
Sbjct: 817 TLFDSHDEFSEWFSKDIESHAQSNTKLNEDQLKRLHMILKPFMLRRVKKHVQQ-----EL 871
Query: 620 PPKTISLTKVDFSKEEWAFYKKLES-----DSLKKFKAFADAGTVNQNYANILLMLLRLR 674
K D + + A+Y L + D ++K +A + ++ ++++ R
Sbjct: 872 GDKVEKDVFCDLTYRQRAYYTNLRNRVSIMDLIEKAAVGDEADST-----TLMNLVMQFR 926
Query: 675 QACDHPLLVK 684
+ C+HP L +
Sbjct: 927 KVCNHPDLFE 936
>sp|Q0CA78|INO80_ASPTN Putative DNA helicase ino80 OS=Aspergillus terreus (strain NIH 2624 /
FGSC A1156) GN=ino80 PE=3 SV=1
Length = 1690
Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/117 (50%), Positives = 76/117 (64%), Gaps = 1/117 (0%)
Query: 856 IVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDREQITVMLMSLKAG 915
+++ Q TRM+DL+E L +Y RLDG+ L R V DF R +I V L+S +AG
Sbjct: 1419 LLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQ-QRPEIFVFLLSTRAG 1477
Query: 916 NLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRILK 972
LG+N+ AA VI D WNPT + QA+DRAHR+GQTR VTV RL R T+E+RI K
Sbjct: 1478 GLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITRGTIEERIRK 1534
Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 92/411 (22%), Positives = 153/411 (37%), Gaps = 80/411 (19%)
Query: 388 LVVCPASVLRQWARELEDKVPDKAALSVLIYHGGSRTKDPVELAKY-DVVLTTYSIVTNE 446
LV+ PAS L W +E+ VPD + VL Y G + KD L K+ D TY+
Sbjct: 871 LVIAPASTLHNWQQEITKFVPD---IKVLPYWGSA--KDRKILRKFWDRKHITYT----- 920
Query: 447 VPKQPSVDEEEADEKNGETYGLSSEFSVNKKRKKISNVSKRGKKGKKGNVNSSIDYGCGP 506
K E + L + + + V Y
Sbjct: 921 --------------KESEFHVLVTSYQL---------------------VVLDAQY---- 941
Query: 507 LAKVGWFRVVLDEAQTIKNHRTQVARACCSLRAKRRWCLSGTPIQNSIDDLYSYFRFLK- 565
KV W ++LDEAQ IK+ ++ + + R L+GTPIQN++ +L++ F+
Sbjct: 942 FQKVKWQYMILDEAQAIKSSQSSRWKNLLGFHCRNRLLLTGTPIQNNMQELWALLHFIMP 1001
Query: 566 --YDPYAVYKSFYST-IKIPISRNSL---HGYKKLQAVLRAIMLRRTKGTFIDGQPIINL 619
+D + + ++S I+ N+ K+L +L+ MLRR K L
Sbjct: 1002 TLFDSHDEFSEWFSKDIESHAQSNTKLNEDQLKRLHMILKPFMLRRVKKHVQQ-----EL 1056
Query: 620 PPKTISLTKVDFSKEEWAFYKKLESDSLKKFKAFADAGTVNQNYANILL-MLLRLRQACD 678
K D + + A+Y L D + A ++ + L+ ++++ R+ C+
Sbjct: 1057 GDKVEKDVFCDLTYRQRAYYTGLR-DRVSIMDLIEKAAVGDEADSTTLMNLVMQFRKVCN 1115
Query: 679 HPLLVKEYDFDS--VGKISGEMAKRLPRDMLIDLLSRLETSSAICCVCSDPPEDSVVTMC 736
HP L + + S E A + +D+ T S I
Sbjct: 1116 HPDLFERAETKSPLTTAYFAETASFVREGQFVDV--GYSTRSLIEYPLP----------- 1162
Query: 737 GHVFCYQCASEYITGDDNMCPAPRCKEQLGADVVFSKTTLKNCVSDDGGGS 787
+ C + G DN+ R K VF+ +K + +DG S
Sbjct: 1163 -RLLCSSAGRVDVAGPDNLHAGFRGKYLAHMMNVFAPENIKQSIQEDGAFS 1212
Score = 34.7 bits (78), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 262 VEATLPDGLLSVNLLKHQKIALAWMLQKETRSLHCLGGILADDQGLGKTISIIALI 317
+E + P +L+ L ++Q L W++ + ++ GILAD+ GLGKTI I+++
Sbjct: 806 IEISQP-SMLTAKLKEYQLKGLNWLVNLYEQGIN---GILADEMGLGKTIQSISVM 857
>sp|Q6ZPV2|INO80_MOUSE DNA helicase INO80 OS=Mus musculus GN=Ino80 PE=2 SV=2
Length = 1559
Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/132 (46%), Positives = 84/132 (63%), Gaps = 4/132 (3%)
Query: 856 IVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDREQITVMLMSLKAG 915
+++SQ TRM+DL+E + Y RLDG+ + R V DF T R I V L+S +AG
Sbjct: 1124 LIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDMVADFQT-RNDIFVFLLSTRAG 1182
Query: 916 NLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRILKLQD 975
LG+N+ AA VI D WNPT + QA+DRAHR+GQT+ VTV RL + T+E+RIL+
Sbjct: 1183 GLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAK 1242
Query: 976 DK---RKMVASA 984
+K ++MV S
Sbjct: 1243 EKSEIQRMVISG 1254
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 92/202 (45%), Gaps = 21/202 (10%)
Query: 507 LAKVGWFRVVLDEAQTIKNHRTQVARACCSLRAKRRWCLSGTPIQNSIDDLYSYFRFLK- 565
+V W +VLDEAQ +K+ + + + + R L+GTPIQN++ +L++ F+
Sbjct: 643 FQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWALLHFIMP 702
Query: 566 --YDPYAVYKSFYST-------IKIPISRNSLHGYKKLQAVLRAIMLRRTKGTFIDGQPI 616
+D + + ++S K I N L +L +L+ MLRR K +
Sbjct: 703 TLFDSHEEFNEWFSKDIESHAENKSAIDENQL---SRLHMILKPFMLRRIKKDVEN---- 755
Query: 617 INLPPKTISLTKVDFSKEEWAFYKKLESDSLKKFKAFADAGTVNQ---NYANILLMLLRL 673
L K LT + + Y+ L++ + + G+ Q ++++ ++++
Sbjct: 756 -ELSDKIEILTYCQLTSRQKLLYQALKNKISIEDLLQSSMGSTQQAQNTTSSLMNLVMQF 814
Query: 674 RQACDHPLLVKEYDFDSVGKIS 695
R+ C+HP L + + S IS
Sbjct: 815 RKVCNHPELFERQETWSPFHIS 836
>sp|Q5BAZ5|INO80_EMENI Putative DNA helicase ino80 OS=Emericella nidulans (strain FGSC A4 /
ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=ino80 PE=3
SV=1
Length = 1612
Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 86/142 (60%), Gaps = 3/142 (2%)
Query: 851 GPIKSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDREQITVMLM 910
G + +++ Q TRM+DL+E L +Y RLDG+ L R V DF R I V L+
Sbjct: 1336 GGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQ-QRPDIFVFLL 1394
Query: 911 SLKAGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRI 970
S +AG LG+N+ AA VI D WNPT + QA+DRAHR+GQTR VTV RL R T+E+RI
Sbjct: 1395 STRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITRSTIEERI 1454
Query: 971 LK--LQDDKRKMVASAFGEDQG 990
K LQ ++ + V + G G
Sbjct: 1455 RKRALQKEEVQRVVISGGAAGG 1476
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 123/306 (40%), Gaps = 64/306 (20%)
Query: 388 LVVCPASVLRQWARELEDKVPDKAALSVLIYHGGSRTKDPVELAKY-DVVLTTYSIVTNE 446
LV+ PAS L W +E+ VP+ + VL Y G + KD L K+ D TY+
Sbjct: 851 LVIAPASTLHNWQQEITKFVPN---IKVLPYWGNA--KDRKILRKFWDRKHITYT----- 900
Query: 447 VPKQPSVDEEEADEKNGETYGLSSEFSVNKKRKKISNVSKRGKKGKKGNVNSSIDYGCGP 506
K E + L + + + V Y
Sbjct: 901 --------------KESEFHVLVTSYQL---------------------VVLDAQY---- 921
Query: 507 LAKVGWFRVVLDEAQTIKNHRTQVARACCSLRAKRRWCLSGTPIQNSIDDLYSYFRFLK- 565
KV W ++LDEAQ IK+ ++ ++ + R L+GTPIQN++ +L++ F+
Sbjct: 922 FQKVKWQYMILDEAQAIKSSQSSRWKSLLGFHCRNRLLLTGTPIQNNMQELWALLHFIMP 981
Query: 566 --YDPYAVYKSFYST-IKIPISRNSL---HGYKKLQAVLRAIMLRRTKGTFIDGQPIINL 619
+D + + ++S I+ N+ ++L +L+ MLRR K L
Sbjct: 982 TLFDSHDEFSEWFSKDIESHAQSNTKLNEDQLRRLHMILKPFMLRRVKKHVQQ-----EL 1036
Query: 620 PPKTISLTKVDFSKEEWAFYKKLESDSLKKFKAFADAGTVNQNYANILL-MLLRLRQACD 678
K D + + A Y L + + A ++ + L+ ++++ R+ C+
Sbjct: 1037 GDKVEKDVFCDLTYRQRALYTNLR-NRVSIMDLIEKAAVGDETDSTTLMNLVMQFRKVCN 1095
Query: 679 HPLLVK 684
HP L +
Sbjct: 1096 HPDLFE 1101
>sp|A1C9W6|INO80_ASPCL Putative DNA helicase ino80 OS=Aspergillus clavatus (strain ATCC 1007
/ CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=ino80
PE=3 SV=1
Length = 1707
Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 86/142 (60%), Gaps = 3/142 (2%)
Query: 851 GPIKSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDREQITVMLM 910
G + +++ Q TRM+DL+E L +Y RLDG+ L R V DF R I V L+
Sbjct: 1434 GGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQ-QRPDIFVFLL 1492
Query: 911 SLKAGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRI 970
S +AG LG+N+ AA VI D WNPT + QA+DRAHR+GQTR VTV RL R T+E+RI
Sbjct: 1493 STRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITRGTIEERI 1552
Query: 971 LK--LQDDKRKMVASAFGEDQG 990
K LQ ++ + V + G G
Sbjct: 1553 RKRALQKEEVQRVVISGGAAGG 1574
Score = 60.5 bits (145), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 124/310 (40%), Gaps = 72/310 (23%)
Query: 388 LVVCPASVLRQWARELEDKVPDKAALSVLIYHGGSRTKDPVELAKY-DVVLTTYSIVTNE 446
LV+ PAS L W +E+ VPD + VL Y G + KD L K+ D TY+
Sbjct: 888 LVIAPASTLHNWQQEITKFVPD---IKVLPYWGSA--KDRKVLRKFWDRKHITYT----- 937
Query: 447 VPKQPSVDEEEADEKNGETYGLSSEFSVNKKRKKISNVSKRGKKGKKGNVNSSIDYGCGP 506
K E + L + + + +
Sbjct: 938 --------------KESEFHVLVTSYQL-------------------------VVLDSQY 958
Query: 507 LAKVGWFRVVLDEAQTIKNHRTQVARACCSLRAKRRWCLSGTPIQNSIDDLYSYFRFLK- 565
KV W ++LDEAQ IK+ ++ + + R L+GTPIQN++ +L++ F+
Sbjct: 959 FQKVKWQYMILDEAQAIKSSQSSRWKNLLGFSCRNRLLLTGTPIQNNMQELWALLHFIMP 1018
Query: 566 --YDPYAVYKSFYST-IKIPISRNSL---HGYKKLQAVLRAIMLRRTKGTFIDGQPIINL 619
+D + + ++S I+ N+ ++L +L+ MLRR K L
Sbjct: 1019 TLFDSHDEFSEWFSKDIESHAQSNTKLNEDQLRRLHMILKPFMLRRVKKHVQQ-----EL 1073
Query: 620 PPKTISLTKVDFSKEEWAFYKKLES-----DSLKKFKAFADAGTVNQNYANILLMLLRLR 674
K D + + A+Y L + D ++K +A + ++ ++++ R
Sbjct: 1074 GDKVEKDVFCDLTYRQRAYYTNLRNRVSIMDLIEKAAVGDEADST-----TLMNLVMQFR 1128
Query: 675 QACDHPLLVK 684
+ C+HP L +
Sbjct: 1129 KVCNHPDLFE 1138
Score = 35.0 bits (79), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
Query: 262 VEATLPDGLLSVNLLKHQKIALAWMLQKETRSLHCLGGILADDQGLGKTISIIALI 317
+E + P+ +L+ L ++Q L W++ + ++ GILAD+ GLGKTI I+++
Sbjct: 823 IEISQPN-MLTAKLKEYQLKGLNWLVNLYEQGIN---GILADEMGLGKTIQSISVM 874
>sp|Q1DUF9|INO80_COCIM Putative DNA helicase INO80 OS=Coccidioides immitis (strain RS)
GN=INO80 PE=3 SV=1
Length = 1662
Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/142 (45%), Positives = 87/142 (61%), Gaps = 3/142 (2%)
Query: 851 GPIKSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDREQITVMLM 910
G + +++ Q TRM+DL+E L +Y RLDG+ L R V DF R +I V L+
Sbjct: 1395 GGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVSDFQ-QRPEIFVFLL 1453
Query: 911 SLKAGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRI 970
S +AG LG+N+ AA VI D WNPT + QA+DRAHR+GQT+ VTV RL R T+E+RI
Sbjct: 1454 STRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTKQVTVYRLITRGTIEERI 1513
Query: 971 LK--LQDDKRKMVASAFGEDQG 990
K LQ ++ + V + G G
Sbjct: 1514 RKRALQKEEVQRVVISGGAAGG 1535
Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 128/309 (41%), Gaps = 70/309 (22%)
Query: 388 LVVCPASVLRQWARELEDKVPDKAALSVLIYHGGSRTKDPVELAKYDVVLTTYSIVTNEV 447
LVV P+S L W +E+ VPD L VL Y G + KD L K+
Sbjct: 849 LVVAPSSTLHNWQQEIVKFVPD---LKVLPYWGSA--KDRKVLRKF-------------- 889
Query: 448 PKQPSVDEEEADEKNGETYGLSSEFSVNKKRKKISNVSKRGKKGKKGNVNSSIDYGCGPL 507
D +N TY SEF V ++ V Y
Sbjct: 890 ----------WDRRNI-TYRKQSEFHVLVTSYQL--------------VVGDAQY----F 920
Query: 508 AKVGWFRVVLDEAQTIKNHRTQVARACCSLRAKRRWCLSGTPIQNSIDDLYSYFRFLK-- 565
K+ W ++LDEAQ IK+ ++ ++ + + R L+GTPIQN++ +L++ F+
Sbjct: 921 QKIKWQYMILDEAQAIKSSQSSRWKSLLGMHCRNRLLLTGTPIQNNMQELWALLHFIMPT 980
Query: 566 -YDPYAVYKSFYST-IKIPISRNSL---HGYKKLQAVLRAIMLRRTKGTFIDGQPIINLP 620
+D + + ++S I+ N+ K+L +L+ MLRR K L
Sbjct: 981 LFDSHDEFSEWFSKDIESHAQSNTKLNEDQLKRLHMILKPFMLRRIKKHVQK-----ELG 1035
Query: 621 PKTISLTKVDFSKEEWAFYKKLES-----DSLKKFKAFADAGTVNQNYANILLMLLRLRQ 675
K D + + A+Y L + D ++K A D + + ++ ++++ R+
Sbjct: 1036 DKVEKDVFCDLTYRQRAYYTSLRNRVSIMDLIEK-AAIGD----DTDSTTLMNLVMQFRK 1090
Query: 676 ACDHPLLVK 684
C+HP L +
Sbjct: 1091 VCNHPDLFE 1099
>sp|Q4IL82|INO80_GIBZE Putative DNA helicase INO80 OS=Gibberella zeae (strain PH-1 / ATCC
MYA-4620 / FGSC 9075 / NRRL 31084) GN=INO80 PE=3 SV=1
Length = 1904
Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 84/139 (60%), Gaps = 4/139 (2%)
Query: 856 IVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDREQITVMLMSLKAG 915
+++ Q TRM+D++E L +Y RLDG+ L R V DF T R +I + L+S +AG
Sbjct: 1646 LLYFQMTRMIDMMEEYLTYRNYKYCRLDGSTKLEDRRDTVHDFQT-RPEIFIFLLSTRAG 1704
Query: 916 NLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRILKLQD 975
LG+N+ A VI D WNPT + QA+DRAHR+GQT+ VTV RL R T+E+RI K
Sbjct: 1705 GLGINLTTADTVIFYDSDWNPTIDSQAMDRAHRLGQTKQVTVYRLITRGTIEERIRKRAM 1764
Query: 976 DKRKMVASAFGEDQGGGTA 994
K ++ QGGG +
Sbjct: 1765 QKEEVQRVVI---QGGGAS 1780
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 129/311 (41%), Gaps = 62/311 (19%)
Query: 388 LVVCPASVLRQWARELEDKVPDKAALSVLIYHGGSRTKDPVELAKYDVVLTTYSIVTNEV 447
LVV PAS L W +E+ VP+ +L Y GG+ + V +D TTY +
Sbjct: 1098 LVVAPASTLHNWQQEIAKFVPE---FKILPYWGGASDRK-VLRKFWDRKHTTYR---KDA 1150
Query: 448 PKQPSVDEEEADEKNGETYGLSSEFSVNKKRKKISNVSKRGKKGKKGNVNSSIDYGCGPL 507
P V +Y L V S + Y
Sbjct: 1151 PFHVCVT----------SYQL---------------------------VVSDVAY----F 1169
Query: 508 AKVGWFRVVLDEAQTIKNHRTQVARACCSLRAKRRWCLSGTPIQNSIDDLYSYFRFLK-- 565
K+ W ++LDEAQ IK+ ++ +A + + R L+GTPIQN++ +L++ F+
Sbjct: 1170 QKMRWQYMILDEAQAIKSSQSSRWKALLNFHCRNRLLLTGTPIQNNMQELWALLHFIMPS 1229
Query: 566 -YDPYAVYKSFYST-IKIPISRNSL---HGYKKLQAVLRAIMLRRTKGTFIDGQPIINLP 620
+D + + ++S I+ N+ K+L +L+ MLRR K L
Sbjct: 1230 LFDSHDEFSEWFSKDIESHAQSNTKLNEDQLKRLHMILKPFMLRRVKKHVQK-----ELG 1284
Query: 621 PKTISLTKVDFSKEEWAFYKKLESD-SLKKFKAFADAGTVNQNYANILLMLLRLRQACDH 679
K D + + A+Y L + ++ A G +Q+ ++ ++++ R+ C+H
Sbjct: 1285 DKIELDIFCDLTYRQRAYYSNLRNQINIMDLVEKATMGD-DQDSGTLMNLVMQFRKVCNH 1343
Query: 680 PLLVKEYDFDS 690
P L + + +S
Sbjct: 1344 PDLFERAEVNS 1354
Score = 33.9 bits (76), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 11/62 (17%)
Query: 256 DLNQPKVEATLPDGLLSVNLLKHQKIALAWMLQKETRSLHCLGGILADDQGLGKTISIIA 315
++ QPK L++ L ++Q L W++ + ++ GILAD+ GLGKT+ I+
Sbjct: 1034 EIEQPK--------LINAQLKEYQLKGLNWLVNLYEQGIN---GILADEMGLGKTVQSIS 1082
Query: 316 LI 317
++
Sbjct: 1083 VM 1084
>sp|Q872I5|INO80_NEUCR Putative DNA helicase ino-80 OS=Neurospora crassa (strain ATCC 24698
/ 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=ino-80 PE=3 SV=3
Length = 1997
Score = 114 bits (284), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 77/117 (65%), Gaps = 1/117 (0%)
Query: 856 IVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDREQITVMLMSLKAG 915
+++ Q TRM+DL+E L +Y RLDG+ L R V DF T R +I + L+S +AG
Sbjct: 1718 LLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQT-RPEIFIFLLSTRAG 1776
Query: 916 NLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRILK 972
LG+N+ +A VI D WNPT + QA+DRAHR+GQT+ VTV RL R T+E+RI K
Sbjct: 1777 GLGINLTSADTVIFYDSDWNPTIDSQAMDRAHRLGQTKQVTVYRLITRGTIEERIRK 1833
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 123/307 (40%), Gaps = 61/307 (19%)
Query: 388 LVVCPASVLRQWARELEDKVPDKAALSVLIYHGGSRTKDPVELAKYDVVLTTYSIVTNEV 447
LVV PAS L W +E+ VP VL Y G + + V +D TTY
Sbjct: 1171 LVVAPASTLHNWQQEITKFVPQ---FKVLPYWGTAGDRK-VLRKFWDRKHTTY------- 1219
Query: 448 PKQPSVDEEEADEKNGETYGLSSEFSVNKKRKKISNVSKRGKKGKKGNVNSSIDYGCGPL 507
+K+ + + + + + V S + Y
Sbjct: 1220 ------------KKDAPFHVMITSYQL---------------------VVSDVAY----F 1242
Query: 508 AKVGWFRVVLDEAQTIKNHRTQVARACCSLRAKRRWCLSGTPIQNSIDDLYSYFRFLK-- 565
K+ W ++LDEAQ IK+ ++ + + R L+GTPIQN++ +L++ F+
Sbjct: 1243 QKMKWQYMILDEAQAIKSSQSSRWKCLLGFHCRNRLLLTGTPIQNNMQELWALLHFIMPS 1302
Query: 566 -YDPYAVYKSFYST-IKIPISRNSL---HGYKKLQAVLRAIMLRRTKGTFIDGQPIINLP 620
+D + + ++S I+ N+ K+L +L+ MLRR K L
Sbjct: 1303 LFDSHDEFSEWFSKDIESHAQSNTKLNEDQLKRLHMILKPFMLRRVKKHVQK-----ELG 1357
Query: 621 PKTISLTKVDFSKEEWAFYKKLESDSLKKFKAFADAGTVNQNYANILLMLLRLRQACDHP 680
K D + + A Y L + + A + + A+++ ++++ R+ C+HP
Sbjct: 1358 DKIEMDVFCDLTYRQRAMYANLR-NQISIMDLIEKATLGDDDSASLMNLVMQFRKVCNHP 1416
Query: 681 LLVKEYD 687
L + D
Sbjct: 1417 DLFERAD 1423
Score = 34.7 bits (78), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 11/62 (17%)
Query: 256 DLNQPKVEATLPDGLLSVNLLKHQKIALAWMLQKETRSLHCLGGILADDQGLGKTISIIA 315
++ QPK LL+ L ++Q L W++ + ++ GILAD+ GLGKT+ I+
Sbjct: 1107 EIEQPK--------LLNCQLKEYQLKGLNWLVNLYEQGIN---GILADEMGLGKTVQSIS 1155
Query: 316 LI 317
++
Sbjct: 1156 VM 1157
>sp|P41447|GTA_NPVAC Probable global transactivator OS=Autographa californica nuclear
polyhedrosis virus GN=GTA PE=3 SV=1
Length = 506
Score = 113 bits (283), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 137/302 (45%), Gaps = 72/302 (23%)
Query: 387 TLVVCPASVLRQWARELEDKVPDKAALSVLIYHGGSRTKDPVELAKYDVVLTTYSIVTNE 446
TL+VCP S++ W E +K D ++L Y+ S D VE Y +V+TTY +
Sbjct: 81 TLIVCPLSLINHWVTE--NKKHD-LNFNILKYYK-SLDADTVE--HYHIVVTTYDV---- 130
Query: 447 VPKQPSVDEEEADEKNGETYGLSSEFSVNKKRKKISNVSKRGKKGKKGNVNSSIDYGCGP 506
L + F + K+ K+ S S R
Sbjct: 131 ---------------------LLAHFKLIKQNKQSSLFSTR------------------- 150
Query: 507 LAKVGWFRVVLDEAQTIKNHRTQVARACCSLRAKRRWCLSGTPIQNSIDDLYSYFRFLKY 566
W RVVLDEA IKN +T V A C+L A RWC++GTPI N D+YS FL+
Sbjct: 151 -----WHRVVLDEAHIIKNCKTGVHNAACALTATNRWCITGTPIHNKHWDMYSMINFLQC 205
Query: 567 DPYAVYKSFYSTIKIPISRNSLHGYKKLQAVLRAIMLRRTKGTFIDGQPIINLPPKTISL 626
P+ + + K S N +++++++ I+L+R K N+P T+
Sbjct: 206 RPFNNPRVWKMLNKNNDSTN------RIKSIIKKIVLKRDKSEISS-----NIPKHTVEY 254
Query: 627 TKVDFSKEEWAFYKKLESDSLKKF-KAFADAGTVN-----QNYANILLMLLRLRQACDHP 680
V+F++EE Y KL+ +S + + KA A N Q ++L ++L+LRQ C HP
Sbjct: 255 VHVNFNEEEKTLYDKLKCESEEAYVKAVAARENENALSRLQQMQHVLWLILKLRQICCHP 314
Query: 681 LL 682
L
Sbjct: 315 YL 316
Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 79/156 (50%), Gaps = 10/156 (6%)
Query: 854 KSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFN-TDREQITVMLMSL 912
K I+ SQW L + EN Q I G + + R A FN Q ++L+S+
Sbjct: 356 KIILVSQWVEYLKIFENFFKQKNIATLMYTGQLKVEDRILAETTFNDAANTQHRILLLSI 415
Query: 913 KAGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTR-LTIRD-TVEDRI 970
K G +GLN++ +H+++L+ WNP E QA DR R+GQT+ V + L + D ++E I
Sbjct: 416 KCGGVGLNLIGGNHIVMLEPHWNPQIELQAQDRISRMGQTKNTYVYKMLNVEDNSIEKYI 475
Query: 971 LKLQDDKRKMVASAFGEDQGGGTASRLTVEDLRYLF 1006
+ QD K V + F E + L ED++ F
Sbjct: 476 KQRQDKKIAFVNTVFEE-------TLLNYEDIKKFF 504
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 42/72 (58%), Gaps = 7/72 (9%)
Query: 256 DLNQPKVEATLPDGLLSVNLLKHQKIALAWMLQKETRSLHCLGGILADDQGLGKTISIIA 315
D + P E P NLL HQK + WM+ +E ++ GG+LADD GLGKT+S++
Sbjct: 17 DNDDPNFEHQTP------NLLAHQKKGIQWMINRE-KNGRPNGGVLADDMGLGKTLSVLM 69
Query: 316 LIQMQRSLQSKS 327
LI SLQ K+
Sbjct: 70 LIAKNNSLQLKT 81
>sp|Q9ULG1|INO80_HUMAN DNA helicase INO80 OS=Homo sapiens GN=INO80 PE=1 SV=2
Length = 1556
Score = 113 bits (283), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 60/134 (44%), Positives = 85/134 (63%), Gaps = 4/134 (2%)
Query: 854 KSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDREQITVMLMSLK 913
+ +++SQ TRM+DL+E + Y RLDG+ + R V DF +R I V L+S +
Sbjct: 1119 RVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDMVADFQ-NRNDIFVFLLSTR 1177
Query: 914 AGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRILKL 973
AG LG+N+ AA VI D WNPT + QA+DRAHR+GQT+ VTV RL + T+E+RIL+
Sbjct: 1178 AGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQR 1237
Query: 974 QDDK---RKMVASA 984
+K ++MV S
Sbjct: 1238 AKEKSEIQRMVISG 1251
Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 91/202 (45%), Gaps = 21/202 (10%)
Query: 507 LAKVGWFRVVLDEAQTIKNHRTQVARACCSLRAKRRWCLSGTPIQNSIDDLYSYFRFLK- 565
+V W +VLDEAQ +K+ + + + + R L+GTPIQN++ +L++ F+
Sbjct: 641 FQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWALLHFIMP 700
Query: 566 --YDPYAVYKSFYST-------IKIPISRNSLHGYKKLQAVLRAIMLRRTKGTFIDGQPI 616
+D + + ++S K I N L +L +L+ MLRR K +
Sbjct: 701 TLFDSHEEFNEWFSKDIESHAENKSAIDENQL---SRLHMILKPFMLRRIKKDVEN---- 753
Query: 617 INLPPKTISLTKVDFSKEEWAFYKKLESDSLKKFKAFADAGTVNQ---NYANILLMLLRL 673
L K L + + Y+ L++ + + G+ Q ++++ ++++
Sbjct: 754 -ELSDKIEILMYCQLTSRQKLLYQALKNKISIEDLLQSSMGSTQQAQNTTSSLMNLVMQF 812
Query: 674 RQACDHPLLVKEYDFDSVGKIS 695
R+ C+HP L + + S IS
Sbjct: 813 RKVCNHPELFERQETWSPFHIS 834
>sp|C0H4W3|HEPF1_PLAF7 Probable ATP-dependent helicase PF08_0048 OS=Plasmodium falciparum
(isolate 3D7) GN=PF08_0048 PE=3 SV=1
Length = 2082
Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 92/159 (57%), Gaps = 4/159 (2%)
Query: 845 SKSPIEGPIKSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDREQ 904
SK EG K ++F+Q+ +MLD++E LN + RLDG+ + R + V FN D+
Sbjct: 1778 SKCKREGN-KCLLFTQFIKMLDILEIFLNHLNYSFIRLDGSTKVEQRQKIVTKFNNDK-S 1835
Query: 905 ITVMLMSLKAGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRD 964
I + + S ++G++G+N+ AA+ VI D WNP+ + QA+DR HRIGQT+ V V R
Sbjct: 1836 IFIFISSTRSGSIGINLTAANVVIFYDTDWNPSIDKQAMDRCHRIGQTKDVHVFRFVCEY 1895
Query: 965 TVEDRILKLQDDKRKM--VASAFGEDQGGGTASRLTVED 1001
TVE+ I K Q KRK+ + G T S++T D
Sbjct: 1896 TVEENIWKKQLQKRKLDNICINMGNFNNSNTHSKITDTD 1934
Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 90/176 (51%), Gaps = 19/176 (10%)
Query: 512 WFRVVLDEAQTIKNHRTQVARACCSLRAKRRWCLSGTPIQNSIDDLYSYFRFLK---YDP 568
W ++LDEA IKN T+ SL+ ++GTP+QNS+++L+S FL +
Sbjct: 784 WKYIILDEAHNIKNFNTKRWNIILSLKRDNCLLITGTPLQNSLEELWSLLHFLMPNIFTS 843
Query: 569 YAVYKSFYST-IKIPISRNSLHGYK----KLQAVLRAIMLRRTKGTFIDGQPIINLPPKT 623
+ +K ++S + + I ++ +H K +L V+R +LRR K ++ + +P K
Sbjct: 844 HLDFKEWFSDPLNLAIEKSKIHHSKELIDRLHTVIRPYILRRLKKN-VEKE----MPNKY 898
Query: 624 ISLTKVDFSKEEWAFYKKLESDSLKKFKAFADAGTVNQNYANILLMLLRLRQACDH 679
+ K ++ + Y + ++ K + + G NY ++ +L++LR+ C+H
Sbjct: 899 EHIIKCKLTRRQQILYDEFINN--KNVQNTLNTG----NYIGLMNILIQLRKVCNH 948
Score = 37.4 bits (85), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 12/58 (20%)
Query: 260 PKVEATLPDGLLSVNLLKHQKIALAWMLQKETRSLHCLGGILADDQGLGKTISIIALI 317
P ++ATL D +Q L W+L ++ GILAD+ GLGKT+ I+L+
Sbjct: 656 PIIKATLRD---------YQHAGLHWLLYLYKNNI---NGILADEMGLGKTLQCISLL 701
>sp|A4R227|INO80_MAGO7 Putative DNA helicase INO80 OS=Magnaporthe oryzae (strain 70-15 /
ATCC MYA-4617 / FGSC 8958) GN=INO80 PE=3 SV=1
Length = 1944
Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 77/122 (63%), Gaps = 1/122 (0%)
Query: 851 GPIKSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDREQITVMLM 910
G + +++ Q TRM+DL+E L +Y RLDG+ R V DF T+ I V L+
Sbjct: 1674 GGHRVLLYFQMTRMIDLMEEYLTYRNWKYCRLDGSTKFEDRRDTVHDFQTN-PSIFVFLL 1732
Query: 911 SLKAGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRI 970
S +AG LG+N+ +A VI D WNPT + QA+DRAHR+GQTR VTV RL R T+E+RI
Sbjct: 1733 STRAGGLGINLTSADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITRGTIEERI 1792
Query: 971 LK 972
K
Sbjct: 1793 RK 1794
Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 128/311 (41%), Gaps = 62/311 (19%)
Query: 388 LVVCPASVLRQWARELEDKVPDKAALSVLIYHGGSRTKDPVELAKYDVVLTTYSIVTNEV 447
LVV PAS L W +E++ VPD L ++ Y G + + +L +
Sbjct: 1131 LVVAPASTLHNWEQEIKRFVPD---LKIVPYWGSASDRK---------ILRKFW------ 1172
Query: 448 PKQPSVDEEEADEKNGETYGLSSEFSVNKKRKKISNVSKRGKKGKKGNVNSSIDYGCGPL 507
++ TY ++F V ++ V S + Y
Sbjct: 1173 ------------DRKHSTYKRDAQFHVAITSYQM--------------VVSDVAY----F 1202
Query: 508 AKVGWFRVVLDEAQTIKNHRTQVARACCSLRAKRRWCLSGTPIQNSIDDLYSYFRFLK-- 565
K+ W ++LDEAQ IK+ ++ + S + R L+GTPIQN++ +L++ F+
Sbjct: 1203 QKMKWQYMILDEAQAIKSSQSSRWKCLLSFHCRNRLLLTGTPIQNNMQELWALLHFIMPS 1262
Query: 566 -YDPYAVYKSFYST-IKIPISRNSL---HGYKKLQAVLRAIMLRRTKGTFIDGQPIINLP 620
+D + + ++S I+ NS K+L +L+ MLRR K L
Sbjct: 1263 LFDSHEEFSDWFSKDIESHAQSNSKLNEDQLKRLHMILKPFMLRRVKKHVQK-----ELG 1317
Query: 621 PKTISLTKVDFSKEEWAFYKKLESD-SLKKFKAFADAGTVNQNYANILLMLLRLRQACDH 679
K D + + A+Y L + S+ A G N + ++ ++++ R+ C+H
Sbjct: 1318 DKIELDVYCDLTYRQRAYYANLRNQISIMDLIEKATLGDDN-DSGTLMNLVMQFRKVCNH 1376
Query: 680 PLLVKEYDFDS 690
P L + D S
Sbjct: 1377 PDLFERADTSS 1387
Score = 35.4 bits (80), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 11/62 (17%)
Query: 256 DLNQPKVEATLPDGLLSVNLLKHQKIALAWMLQKETRSLHCLGGILADDQGLGKTISIIA 315
++ QPK LL+ L ++Q L W++ + ++ GILAD+ GLGKTI I+
Sbjct: 1067 EIEQPK--------LLTATLKEYQLKGLNWLVNLYEQGIN---GILADEMGLGKTIQSIS 1115
Query: 316 LI 317
++
Sbjct: 1116 VM 1117
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.131 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 373,368,374
Number of Sequences: 539616
Number of extensions: 16110943
Number of successful extensions: 44151
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 501
Number of HSP's successfully gapped in prelim test: 175
Number of HSP's that attempted gapping in prelim test: 42136
Number of HSP's gapped (non-prelim): 1778
length of query: 1008
length of database: 191,569,459
effective HSP length: 128
effective length of query: 880
effective length of database: 122,498,611
effective search space: 107798777680
effective search space used: 107798777680
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)