Query 001836
Match_columns 1008
No_of_seqs 270 out of 2773
Neff 8.7
Searched_HMMs 29240
Date Tue Mar 26 16:49:38 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001836.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1131-1134//hhsearch_pdb/001836hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ixz_A Potassium-transporting 1.0 1 1 884.0 61.6 742 47-995 78-849 (1034)
2 2zxe_A Na, K-ATPase alpha subu 1.0 1 1 882.2 45.4 739 47-994 73-843 (1028)
3 3ar4_A Sarcoplasmic/endoplasmi 1.0 1 1 879.7 55.0 763 46-996 29-826 (995)
4 1mhs_A Proton pump, plasma mem 1.0 1 1 800.8 38.4 639 47-982 93-742 (920)
5 3b8c_A ATPase 2, plasma membra 1.0 1 1 791.1 -4.9 644 46-979 37-693 (885)
6 3rfu_A Copper efflux ATPase; a 1.0 1 1 604.2 41.6 527 109-975 191-730 (736)
7 3j09_A COPA, copper-exporting 1.0 1 1 599.5 41.5 492 109-945 177-679 (723)
8 3j08_A COPA, copper-exporting 1.0 1 1 589.9 41.9 488 109-940 99-597 (645)
9 2yj3_A Copper-transporting ATP 1.0 1 1 209.7 0.0 138 705-925 123-262 (263)
10 3a1c_A Probable copper-exporti 1.0 1 1 179.0 20.4 272 397-924 14-287 (287)
No 1
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A
Probab=1.00 E-value=1 Score=884.03 Aligned_cols=742 Identities=19% Similarity=0.206 Sum_probs=580.1
Q ss_pred CCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--CC-------CCCCCHHHHHHHHHHHHHH
Q ss_conf 77788878996454356512643489999995456898999988621423--78-------8884123153678999998
Q 001836 47 HKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP--LS-------PFSPVSMLLPLAIVVGVSM 117 (1008)
Q Consensus 47 ~~~~~~~yg~N~i~~~ky~~~~flp~~l~~qf~~~~n~~~l~i~il~~~~--~~-------~~~~~~~~~~l~~vi~is~ 117 (1008)
..+|+++||+|.+...+...++ +.+++||.++++++++++++++++. +. ....+...+++++++++++
T Consensus 78 a~~rl~~~G~N~l~~~~~~~~~---~~~~~q~~~~~~~il~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~ 154 (1034)
T 3ixz_A 78 AAELLLRDGPNALRPPRGTPEY---VKFARQLAGGLQCLMWVAAAICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTG 154 (1034)
T ss_pred HHHHHHHHCCCCCCCCCCCCHH---HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEEEEHHH
T ss_conf 9999985099989998999889---9999998473899999999999999987403477765442056424301322799
Q ss_pred HHHHHHHHHHHHCHHHHHC---CEEEEEECCCEEEEECCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCEEEEECCCCC
Q ss_conf 6999999984210398733---0889996686375305668975829994169713760999732189853999703677
Q 001836 118 AKEALEDWRRFMQDKEVNA---RKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLD 194 (1008)
Q Consensus 118 i~~~~~d~~r~k~~~~~n~---~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPAD~iiL~ss~~~g~~~Vd~s~Lt 194 (1008)
+.+.++++|..++.+.+++ .+++|+ |||++++|++++|+|||||.|++||.||||+++|++++ +.||||+||
T Consensus 155 ~~~~~qe~ka~~al~~L~~l~~~~a~Vi-RdG~~~~I~~~eLv~GDiV~l~~Gd~VPAD~~ll~~~~----l~VdES~LT 229 (1034)
T 3ixz_A 155 CFGYYQEFKSTNIIASFKNLVPQQATVI-RDGDKFQINADQLVVGDLVEMKGGDRVPADIRILQAQG----RKVDNSSLT 229 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCEEEEE-ECCEEEEEEHHHCCCCCEEEECCCCEECCCEEEEEECC----CEEEECCCC
T ss_conf 9999999999999999762489735999-99989998889879885899857964358769997088----058833667
Q ss_pred CCCCCEEEECCCCCCCCCCHHHHCCCCEEEEECCCCCCCCEEEEEEEECCEEEECCCCCEEECCCEEECCCEEEEEEEEE
Q ss_conf 87774333045557999965555048169995089999505799999889253049897141360772188599999984
Q 001836 195 GETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFT 274 (1008)
Q Consensus 195 GEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~t 274 (1008)
|||.|+.|.+..... .........|+||.+.+|. +.|+|++|
T Consensus 230 GES~pv~K~~~~~~~-----------------~~~~~~n~~f~GT~v~~G~---------------------~~~vVv~t 271 (1034)
T 3ixz_A 230 GESEPQTRSPECTHE-----------------SPLETRNIAFFSTMCLEGT---------------------AQGLVVNT 271 (1034)
T ss_pred CCCCCEECCCCCCCC-----------------CCCCCCCCEECCEEEEEEC---------------------CEEEEEEE
T ss_conf 887776655777665-----------------6323445122040698604---------------------24999960
Q ss_pred CCCCCEEC---CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 37520000---489999964479999989999999999999999988553001257997421378898643599998665
Q 001836 275 GHDSKVMQ---NATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVP 351 (1008)
Q Consensus 275 G~~Tk~~~---~~~~~~~k~s~l~~~~~~~~~~~~~~~i~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (1008)
|.+|.+++ +....+.+++++++.++++...+..+.++++++.++++.++.. .
T Consensus 272 G~~T~~GkI~~~~~~~~~~~tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-----~-------------------- 326 (1034)
T 3ixz_A 272 GDRTIIGRIASLASGVENEKTPIAIEIEHFVDIIAGLAILFGATFFIVAMCIGY-----T-------------------- 326 (1034)
T ss_pred HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----H--------------------
T ss_conf 254374089986203566789189999999999999999999999999999641-----2--------------------
Q ss_pred HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEEECCCCCEEEECE
Q ss_conf 89999999999702120034888999999999998301126446679865213443011012505999759871122002
Q 001836 352 GLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQM 431 (1008)
Q Consensus 352 ~~~~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~m 431 (1008)
....+..++.+++.+||++|+++++++..+++.+| +++++++|+++++|+||++++||||||||||+|+|
T Consensus 327 ~~~~~~~~i~l~v~~iPe~Lp~~vti~la~~~~rm----------ak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m 396 (1034)
T 3ixz_A 327 FLRAMVFFMAIVVAYVPEGLLATVTVCLSLTAKRL----------ASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRM 396 (1034)
T ss_pred HHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHH----------HHCCEEECCHHHHHHHCCCCEEECCCCCCCCCCEE
T ss_conf 99999999999882026650899999999999987----------33882864767888615872997289787236837
Q ss_pred EEEEEEECCEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHCC
Q ss_conf 79999993830379970788999986200525554432100147999731010000358998632345787656500006
Q 001836 432 DFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMD 511 (1008)
Q Consensus 432 ~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (1008)
.|.++++++..|.....+.. .+.
T Consensus 397 ~v~~~~~~~~~~~~~~~~~~------------------------------------------------~~~--------- 419 (1034)
T 3ixz_A 397 TVSHLWFDNHIHSADTTEDQ------------------------------------------------SGQ--------- 419 (1034)
T ss_pred EEEEEEECCCCCCCCCCCCC------------------------------------------------CCC---------
T ss_conf 99999977951225676665------------------------------------------------665---------
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHCCEECCCCCCC--CCEEEECCCCCHHHHHHHHHHCCCEEEEECCCEEEEEECCCCCCC
Q ss_conf 688899984789999999831043020235899--973784289509999999998894999773985999942899998
Q 001836 512 GNWLKEPNVDTLLLFFRILAICHTAIPELNEET--GNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQ 589 (1008)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~la~C~~~~~~~~~~~--~~~~y~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~ 589 (1008)
...........++.++++||++....+++. ..-....++|.|.|++.++...+.....
T Consensus 420 ---~~~~~~~~~~~l~~~~~lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~----------------- 479 (1034)
T 3ixz_A 420 ---TFDQSSETWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMG----------------- 479 (1034)
T ss_pred ---CCCCCCHHHHHHHHHHHHHCCCEECCCCCCCCCCCCEECCCCHHHHHHHHHHHHCCCHHH-----------------
T ss_conf ---567677899999999887162665357677766574355492599999999985788688-----------------
Q ss_pred CCEEEEEEEEEECCCCCCCEEEEEEECC---CCCEEEEECCCHHHHHHHHCC---------CCCCCHHHHHHHHHHHHHC
Q ss_conf 6227998977307989971689999808---992999983660466775202---------7421389999999999835
Q 001836 590 PVEREFKILNLLDFTSKRKRMSVIVRDE---DGQILLLCKGADSIIFDRLSK---------NGRMYEEATTKLLNEYGEA 657 (1008)
Q Consensus 590 ~~~~~~~il~~~~F~s~rkrmsviv~~~---~~~~~l~~KGa~~~i~~~~~~---------~~~~~~~~~~~~~~~~~~~ 657 (1008)
....|+++..+||+|+||||+++++.. ++++.+|+||||+.|+++|+. .++..++.+.+.+++++.+
T Consensus 480 -~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~~~l~~KGApe~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ 558 (1034)
T 3ixz_A 480 -YRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGL 558 (1034)
T ss_pred -HHHHCCCEEEEEECCCCCEEEEEEEECCCCCCCEEEEEECCHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHC
T ss_conf -8974860699503577726899998337888608999968849999973775528964019999999999999998714
Q ss_pred CCEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEE
Q ss_conf 87088889970798899999999999874110189999999999743064697641023446888099999999759909
Q 001836 658 GLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKI 737 (1008)
Q Consensus 658 Glr~l~~A~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~i~i~D~lr~~~~~~I~~L~~agIkv 737 (1008)
|+|||++|+|.++++++.++... +.+ ..+.+|+||+|+|+++++||+|++++++|++|+++||++
T Consensus 559 G~RvLa~A~~~l~~~~~~~~~~~----------~~~-----~~~~~e~~l~~lGlv~i~Dp~r~~~~~aI~~l~~aGI~v 623 (1034)
T 3ixz_A 559 GERVLGFCQLYLSEKDYPPGYAF----------DVE-----AMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRV 623 (1034)
T ss_pred CCHHHEEEEEECCHHHCCCCCCC----------CHH-----HHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCEE
T ss_conf 75823686785580004321124----------534-----430222486798887136887065999999999869969
Q ss_pred EEECCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHH
Q ss_conf 99948977669999988574447953899906883038999999999869999997887532017998836999926014
Q 001836 738 WVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTL 817 (1008)
Q Consensus 738 ~ilTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l 817 (1008)
||+|||+..||.++|+++|+...+...+ . +..... ...............+++|..+
T Consensus 624 vmiTGd~~~tA~~ia~~lgi~~~~~~~i----------~---------~~~~~~----~~~~~~~~~~~~~~~~~~g~~l 680 (1034)
T 3ixz_A 624 IMVTGDHPITAKAIAASVGIISEGSETV----------E---------DIAARL----RVPVDQVNRKDARACVINGMQL 680 (1034)
T ss_pred EEEECCCHHHHHHHHHHCCCCCCCCHHH----------H---------HHHHHH----CCCCHHCCCCCCCEEEEECHHH
T ss_conf 9996997799999999869998872478----------8---------888761----7650002544543167716766
Q ss_pred HHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEECCCCCHHHHHH
Q ss_conf 58725999999983220289159999084639999999961169909995389688666662471189516740014230
Q 001836 818 AYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMA 897 (1008)
Q Consensus 818 ~~~~~~~~~~~f~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~vl~iGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~ 897 (1008)
....++++.+ ....+...+|+|++|+||..+|+.+++ .+..|+|+|||.||++||+.||+||||+++....++.+
T Consensus 681 ~~~~~~~l~~----~~~~~~~~v~ar~~P~~K~~iv~~lq~-~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~a 755 (1034)
T 3ixz_A 681 KDMDPSELVE----ALRTHPEMVFARTSPQQKLVIVESCQR-LGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNA 755 (1034)
T ss_pred HHCCHHHHHH----HHHHCCCEEEEECCHHHHHHHHHHHHH-CCCEEEEECCCHHHHHHHHHCCEEEEECCCCCHHHHHH
T ss_conf 6389999999----987378269996698999999999997-69999998795776999997893298077567999985
Q ss_pred CCEEECCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 66430325447899-98611338899999899998889999999999997730446313246999999998735678855
Q 001836 898 SDFSIAQFRFLERL-LVVHGHWCYKRIAQMICYFFYKNIAFGLTLFYFEAFASFSGQSVYNDWYMLSFNVVLTALPVISL 976 (1008)
Q Consensus 898 aD~vi~~~~~l~~l-ll~~GR~~~~~~~~~i~~~~~~ni~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~i~~~lp~~~~ 976 (1008)
||+++.++++...+ .+.|||+.|.|+++++.|.+++|+..+++.+++.++. ...++.+++++|.|++++.+|++++
T Consensus 756 AD~Vl~~~~~~gI~~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~---~~~pl~~~qiL~inl~~d~~palal 832 (1034)
T 3ixz_A 756 ADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVS---VPLPLGCITILFIELCTDIFPSVSL 832 (1034)
T ss_pred CCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 4999666883399999999889999999999999999999999999999982---1466899999999999888888885
Q ss_pred HHCCCCCCHHHHHHCCCCC
Q ss_conf 4115679927774159774
Q 001836 977 GVFEQDVSSEICLQVRPAD 995 (1008)
Q Consensus 977 ~~~~~d~~~~~~~~~P~ly 995 (1008)
+.. +..++.+.+.|.-.
T Consensus 833 ~~e--~~~~~~m~~~Pr~~ 849 (1034)
T 3ixz_A 833 AYE--KAESDIMHLRPRNP 849 (1034)
T ss_pred HCC--CCCHHHHHCCCCCC
T ss_conf 168--89732664799897
No 2
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A
Probab=1.00 E-value=1 Score=882.22 Aligned_cols=739 Identities=21% Similarity=0.245 Sum_probs=573.0
Q ss_pred CCCCCCCCCCCEEECCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC--C----C---CCCCHHHHHHHHHHHHH
Q ss_conf 77788878996454356-5126434899999954568989999886214237--8----8---88412315367899999
Q 001836 47 HKKRPLKYCTNYISTTK-YNFFSYFPKALFEQFNRVANIYFLIAALLSVTPL--S----P---FSPVSMLLPLAIVVGVS 116 (1008)
Q Consensus 47 ~~~~~~~yg~N~i~~~k-y~~~~flp~~l~~qf~~~~n~~~l~i~il~~~~~--~----~---~~~~~~~~~l~~vi~is 116 (1008)
...|+++||+|.+..++ .++| +.+++||.++++++++++++++++.. . . ...+...++++++++++
T Consensus 73 ~~~r~~~~G~N~l~~~~~~~~~----~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~ 148 (1028)
T 2zxe_A 73 AKEILARDGPNSLTPPPTTPEW----IKFCRQLFGGFSILLWIGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVT 148 (1028)
T ss_dssp HHHHHHHHCCSCCCCCCCCCHH----HHHHTTTTSTHHHHHHHHHHHHHHHHHHHHHSSCCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCCCCCCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 9999986699979999999899----999999970899999999999999987511345666520079998989888899
Q ss_pred HHHHHHHHHHHHHCHHHHH---CCEEEEEECCCEEEEECCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCEEEEECCCC
Q ss_conf 8699999998421039873---3088999668637530566897582999416971376099973218985399970367
Q 001836 117 MAKEALEDWRRFMQDKEVN---ARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNL 193 (1008)
Q Consensus 117 ~i~~~~~d~~r~k~~~~~n---~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPAD~iiL~ss~~~g~~~Vd~s~L 193 (1008)
++.+++++++..++.+.+. ..+++|+ |+|++++|++++|+|||||.|++||.||||++++++++ |+||||+|
T Consensus 149 ~~~~~~qe~ka~~~~~~L~~l~~~~a~V~-Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~----~~VdeS~L 223 (1028)
T 2zxe_A 149 GCFSYYQEAKSSRIMDSFKNMVPQQALVI-RDGEKSTINAEFVVAGDLVEVKGGDRIPADLRIISAHG----CKVDNSSL 223 (1028)
T ss_dssp HHHHHHHTCCCCCHHHHHHTTSCSEEEEE-ETTEEEEEEGGGCCTTCEEEEETTCBCCSEEEEEEEEE----EEEECHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCEEEEE-ECCEEEEEEHHHCCCCCEEEECCCCEEECEEEEEEECC----EEEECCCC
T ss_conf 99999999999999999885278726999-89999999888978677799899798412289996085----89986756
Q ss_pred CCCCCCEEEECCCCCCCCCCHHHHCCCCEEEEECCCCCCCCEEEEEEEECCEEEECCCCCEEECCCEEECCCEEEEEEEE
Q ss_conf 78777433304555799996555504816999508999950579999988925304989714136077218859999998
Q 001836 194 DGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIF 273 (1008)
Q Consensus 194 tGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~ 273 (1008)
||||.|+.|.++... + .+++.+|++++||.+.+ ++++|+|++
T Consensus 224 TGES~pv~K~~~~~~--------------------~-----------------~~~~~~n~v~~GT~v~~-G~~~~~V~~ 265 (1028)
T 2zxe_A 224 TGESEPQTRSPEFSS--------------------E-----------------NPLETRNIAFFSTNCVE-GTARGVVVY 265 (1028)
T ss_dssp HSCCSCEECCSSCCC--------------------S-----------------STTTCSSEECTTCEEEE-EEEEEEEEE
T ss_pred CCCCCCEECCCCCCC--------------------C-----------------CCCCCCCEEEECCEEEC-CEEEEEEEE
T ss_conf 788763443467788--------------------8-----------------84453354873746970-169999998
Q ss_pred ECCCCCEEC---CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 437520000---48999996447999998999999999999999998855300125799742137889864359999866
Q 001836 274 TGHDSKVMQ---NATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLV 350 (1008)
Q Consensus 274 tG~~Tk~~~---~~~~~~~k~s~l~~~~~~~~~~~~~~~i~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (1008)
||.+|++++ +...++.+++++++.+++++.+++++.++++++.+++..+. . ..|+
T Consensus 266 tG~~T~~g~i~~~~~~~~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~~~-~----~~~~----------------- 323 (1028)
T 2zxe_A 266 TGDRTVMGRIATLASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSFFILSLIL-G----YSWL----------------- 323 (1028)
T ss_dssp CGGGSHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-T----CCHH-----------------
T ss_pred ECCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-C----CCHH-----------------
T ss_conf 45143988999860378878892899999999999999999999999999973-6----7699-----------------
Q ss_pred HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEEECCCCCEEEEC
Q ss_conf 58999999999970212003488899999999999830112644667986521344301101250599975987112200
Q 001836 351 PGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQ 430 (1008)
Q Consensus 351 ~~~~~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~ 430 (1008)
..+.+++.+++.+||++|+++++++...++.+| +++++++|+++.+|+||++++||||||||||+|+
T Consensus 324 ---~~~~~~i~llv~~iP~~Lp~~vti~l~~~~~~m----------ak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~ 390 (1028)
T 2zxe_A 324 ---EAVIFLIGIIVANVPEGLLATVTVCLTLTAKRM----------ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNR 390 (1028)
T ss_dssp ---HHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSS
T ss_pred ---HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH----------HHCCCEECCCHHHHHHCCCEEEECCCCCCCCCCE
T ss_conf ---999999999999747417999999999999998----------5589164445676641476299516888888773
Q ss_pred EEEEEEEECCEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHC
Q ss_conf 27999999383037997078899998620052555443210014799973101000035899863234578765650000
Q 001836 431 MDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLM 510 (1008)
Q Consensus 431 m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (1008)
|+|.++++++..|.....+. . .+.
T Consensus 391 m~v~~~~~~~~~~~~~~~~~----------------------------~--------------------~~~-------- 414 (1028)
T 2zxe_A 391 MTVAHMWFDNQIHEADTTEN----------------------------Q--------------------SGA-------- 414 (1028)
T ss_dssp CEEEEEEETTEEEECCCCTT----------------------------C--------------------CSC--------
T ss_pred EEEEEEEECCEEEECCCCCC----------------------------C--------------------CCC--------
T ss_conf 89999998984651367777----------------------------6--------------------554--------
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCEECCCCCCCC--CEEEECCCCCHHHHHHHHHHCCCEEEEECCCEEEEEECCCCCC
Q ss_conf 66888999847899999998310430202358999--7378428950999999999889499977398599994289999
Q 001836 511 DGNWLKEPNVDTLLLFFRILAICHTAIPELNEETG--NLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKG 588 (1008)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~la~C~~~~~~~~~~~~--~~~y~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~ 588 (1008)
..........+++.++++||++..+.+.+.. ...+..++|+|.|++++++..|.....
T Consensus 415 ----~~~~~~~~~~~l~~~~alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~~---------------- 474 (1028)
T 2zxe_A 415 ----AFDKTSATWSALSRIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQG---------------- 474 (1028)
T ss_dssp ----CCCSSCHHHHHHHHHHHHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHHH----------------
T ss_pred ----CCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCEECCCCHHHHHHHHHHHHCCCHHH----------------
T ss_conf ----446677899999999986578765047777766453007894099999999995898889----------------
Q ss_pred CCCEEEEEEEEEECCCCCCCEEEEEEECC---CCCEEEEECCCHHHHHHHHCCC---------CCCCHHHHHHHHHHHHH
Q ss_conf 86227998977307989971689999808---9929999836604667752027---------42138999999999983
Q 001836 589 QPVEREFKILNLLDFTSKRKRMSVIVRDE---DGQILLLCKGADSIIFDRLSKN---------GRMYEEATTKLLNEYGE 656 (1008)
Q Consensus 589 ~~~~~~~~il~~~~F~s~rkrmsviv~~~---~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~~~~~~~ 656 (1008)
.+..|+++..+||+|+||||+++++.+ ++++.+|+||||+.|+++|... ++..++.+.+++++++.
T Consensus 475 --~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~ 552 (1028)
T 2zxe_A 475 --MRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGG 552 (1028)
T ss_dssp --HHHHSCEEEEECCCTTTCEEEEEEECSCTTTCCEEEEEEECHHHHHTTEEEECBTTBCCBCCHHHHHHHHHHHHHHHH
T ss_pred --HHHHCCEEEEECCCCCCCEEEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf --887482678704476666479999405788871799993882899987456533897212888999999999999985
Q ss_pred CCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCE
Q ss_conf 58708888997079889999999999987411018999999999974306469764102344688809999999975990
Q 001836 657 AGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLK 736 (1008)
Q Consensus 657 ~Glr~l~~A~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~i~i~D~lr~~~~~~I~~L~~agIk 736 (1008)
+|+|||++|+|+++++++.++. . .+++ ..+.+|.|++|+|+++++||+|++++++|++|+++||+
T Consensus 553 ~G~RvL~~A~~~l~~~~~~~~~--------~--~~~~-----~~~~~e~~l~~lG~i~i~Dplr~~~~~aI~~l~~aGI~ 617 (1028)
T 2zxe_A 553 LGERVLGFCHFALPEDKYNEGY--------P--FDAD-----EPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIK 617 (1028)
T ss_dssp TTCEEEEEEEEECCSTTSCTTC--------C--CCTT-----TTCSCCSSEEEEEEEEEECCBCTTHHHHHHHHHHTTCE
T ss_pred CCCEEEEEEEEECCCCCCCCCC--------C--CCHH-----HHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCE
T ss_conf 5997999998746822134201--------2--4624-----55555438099865115789984489999999986997
Q ss_pred EEEECCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCH
Q ss_conf 99994897766999998857444795389990688303899999999986999999788753201799883699992601
Q 001836 737 IWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKT 816 (1008)
Q Consensus 737 v~ilTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~ 816 (1008)
+||+|||+..||.++|++|||...+...+ . +..... ...+. ..........+++|..
T Consensus 618 v~miTGD~~~tA~~ia~~lgi~~~~~~~i----------~---------~~~~~~---~~~~~-~~~~~~~~~~vi~G~~ 674 (1028)
T 2zxe_A 618 VIMVTGDHPITAKAIAKGVGIISEGNETI----------E---------DIAARL---NIPIG-QVNPRDAKACVVHGSD 674 (1028)
T ss_dssp EEEECSSCHHHHHHHHHHHTSSCTTCCCH----------H---------HHHHHT---TCCGG-GSCGGGCCEEEEEHHH
T ss_pred EEEECCCCHHHHHHHHHHCCCCCCCCHHH----------H---------HHHHHC---CCCHH-HCCCCCCCEEEEECHH
T ss_conf 99988997799999999869887883367----------7---------777641---86322-2155566269988088
Q ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEECCCCCHHHHH
Q ss_conf 45872599999998322028915999908463999999996116990999538968866666247118951674001423
Q 001836 817 LAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVM 896 (1008)
Q Consensus 817 l~~~~~~~~~~~f~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~vl~iGDG~ND~~ml~~AdvGI~i~g~~~~~a~~ 896 (1008)
+....++++.+ +...+..++|||++|+||..+|+.+++ .|+.|+|+|||.||++||++||+||||+.+....++.
T Consensus 675 l~~~~~~~l~~----~~~~~~~~v~ar~~P~~K~~iV~~lq~-~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~ak~ 749 (1028)
T 2zxe_A 675 LKDLSTEVLDD----ILHYHTEIVFARTSPQQKLIIVEGCQR-QGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQ 749 (1028)
T ss_dssp HTTCCHHHHHH----HHHHCSEEEEESCCHHHHHHHHHHHHH-TTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHHHHH
T ss_pred HHHCCHHHHHH----HHHHCCCEEEEECCHHHHHHHHHHHHH-CCCEEEEECCCCCHHHHHHHCCCEEEECCCCCHHHHH
T ss_conf 56479999999----986279679998588899999999996-8998999858853399998689119967765888998
Q ss_pred HCCEEECCHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 06643032544--7899986113388999998999988899999999999977304463132469999999987356788
Q 001836 897 ASDFSIAQFRF--LERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTLFYFEAFASFSGQSVYNDWYMLSFNVVLTALPVI 974 (1008)
Q Consensus 897 ~aD~vi~~~~~--l~~lll~~GR~~~~~~~~~i~~~~~~ni~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~i~~~lp~~ 974 (1008)
+||+++.+.++ +..+ +.|||+.|.|+++++.|.+++|+..+++.+++.++. ...++.+++++|.|++++.+|++
T Consensus 750 aAD~Vl~~~~~~~I~~~-i~~gR~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~~---~~~~l~~~qil~inl~~d~~pa~ 825 (1028)
T 2zxe_A 750 AADMILLDDNFASIVTG-VEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGN---VPLPLGTVTILCIDLGTDMVPAI 825 (1028)
T ss_dssp HCSEEETTCCTHHHHHH-HHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHC---CCCSSCHHHHHHHHTTTTHHHHH
T ss_pred HCCEEECCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 54899557987799999-999999999999999999999999999999999976---66445799999999999999999
Q ss_pred HHHHCCCCCCHHHHHHCCCC
Q ss_conf 55411567992777415977
Q 001836 975 SLGVFEQDVSSEICLQVRPA 994 (1008)
Q Consensus 975 ~~~~~~~d~~~~~~~~~P~l 994 (1008)
+++.. + ..++.+.+.|..
T Consensus 826 al~~e-~-~~~~~m~~~Pr~ 843 (1028)
T 2zxe_A 826 SLAYE-Q-AESDIMKRQPRN 843 (1028)
T ss_dssp HGGGC-C-CSSCGGGSCCCC
T ss_pred HHCCC-C-CCHHHHCCCCCC
T ss_conf 86028-6-614565159999
No 3
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...
Probab=1.00 E-value=1 Score=879.72 Aligned_cols=763 Identities=21% Similarity=0.237 Sum_probs=567.4
Q ss_pred CCCCCCCCCCCCEEECCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCCC------CCCHHHHHHHHHHHHHH
Q ss_conf 7777888789964543565-12643489999995456898999988621423-7888------84123153678999998
Q 001836 46 MHKKRPLKYCTNYISTTKY-NFFSYFPKALFEQFNRVANIYFLIAALLSVTP-LSPF------SPVSMLLPLAIVVGVSM 117 (1008)
Q Consensus 46 ~~~~~~~~yg~N~i~~~ky-~~~~flp~~l~~qf~~~~n~~~l~i~il~~~~-~~~~------~~~~~~~~l~~vi~is~ 117 (1008)
+...|+++||+|.+..+++ ++| +.+++||++++++++++++++++++ +... .|+. .+.+++++++++
T Consensus 29 e~~~r~~~~G~N~l~~~~~~~~~----~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~ 103 (995)
T 3ar4_A 29 QVKRHLEKYGHNELPAEEGKSLW----ELVIEQFEDLLVRILLLAACISFVLAWFEEGEETITAFVE-PFVILLILIANA 103 (995)
T ss_dssp HHHHHHHHHCCSSCCCCCCCCHH----HHHHGGGCSHHHHHHHHHHHHHHHHTTSCCSSGGGSSSHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCCCCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH-HHHHHHHHHHHH
T ss_conf 99999975688732898898699----9999999889999999999999998860256654034787-688667889999
Q ss_pred HHHHHHHHHHHHCHHHH---HCCEEEEEECCCE--EEEECCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCEEEEECCC
Q ss_conf 69999999842103987---3308899966863--753056689758299941697137609997321898539997036
Q 001836 118 AKEALEDWRRFMQDKEV---NARKVSVHVGNGV--FSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMN 192 (1008)
Q Consensus 118 i~~~~~d~~r~k~~~~~---n~~~~~V~~r~g~--~~~i~~~~L~vGDII~l~~ge~iPAD~iiL~ss~~~g~~~Vd~s~ 192 (1008)
+.+.+++++..++.+.+ ...+++|+ |+|. +++|++++|+|||||.|++||.||||+++++.+. +.|+||||+
T Consensus 104 ~i~~~qe~~a~~al~~L~~~~~~~a~V~-R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPaD~~ll~~~s--~~l~VdeS~ 180 (995)
T 3ar4_A 104 IVGVWQERNAENAIEALKEYEPEMGKVY-RADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKS--TTLRVDQSI 180 (995)
T ss_dssp HHHHHHHHHCCCHHHHHGGGSCSEEEEE-BTTCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECS--SCEEEECHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCEEEEE-ECCCCEEEEEEHHHCCCCCEEEECCCCCCCCCEEEEEEEE--CEEEEECCC
T ss_conf 9999999999999999871089738999-3798647997899987787899889784354489998850--439998252
Q ss_pred CCCCCCCEEEECCCCCCCCCCHHHHCCCCEEEEECCCCCCCCEEEEEEEECCEEEECCCCCEEECCCEEECCCEEEEEEE
Q ss_conf 77877743330455579999655550481699950899995057999998892530498971413607721885999999
Q 001836 193 LDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVI 272 (1008)
Q Consensus 193 LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv 272 (1008)
|||||.|+.|.++.... + ...+.+.+|++++||.+.+ ++++|+|+
T Consensus 181 LTGES~pv~K~~~~~~~-------------------~---------------~~~~~~~~~~v~~GT~v~~-G~~~~~V~ 225 (995)
T 3ar4_A 181 LTGESVSVIKHTEPVPD-------------------P---------------RAVNQDKKNMLFSGTNIAA-GKALGIVA 225 (995)
T ss_dssp HHCCCSCEEECCSCCCC-------------------T---------------TCCGGGCTTEECTTCEEEE-CEEEEEEE
T ss_pred CCCCCCCEECCCCCCCC-------------------C---------------CCCCCCCCCEEECCCEEEC-CEEEEEEE
T ss_conf 46887633400456677-------------------6---------------6675554546761878984-45899999
Q ss_pred EECCCCCEECC---CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECC-CCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 84375200004---8999996447999998999999999999999998855300125-7997421378898643599998
Q 001836 273 FTGHDSKVMQN---ATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINY-QTPQWWYLKPKETDVYFNPGKP 348 (1008)
Q Consensus 273 ~tG~~Tk~~~~---~~~~~~k~s~l~~~~~~~~~~~~~~~i~~~~i~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 348 (1008)
+||.+|+++++ ...++.+++++++.+++++.++.++.+++|++.+++...+... .....|+
T Consensus 226 ~tG~~T~~g~i~~~~~~~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 290 (995)
T 3ar4_A 226 TTGVSTEIGKIRDQMAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWI--------------- 290 (995)
T ss_dssp ECGGGSHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGSCSSSSCHH---------------
T ss_pred ECCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH---------------
T ss_conf 76722198999997325787899389999999999999999999999999998741433464079---------------
Q ss_pred CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEEECCCCCEEE
Q ss_conf 66589999999999702120034888999999999998301126446679865213443011012505999759871122
Q 001836 349 LVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTC 428 (1008)
Q Consensus 349 ~~~~~~~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~e~Lg~v~~i~~DKTGTLT~ 428 (1008)
......|..++.+++.+||++|+++++++...++.+| +++++++|+++.+|+||++++||||||||||+
T Consensus 291 -~~~~~~~~~ai~l~v~aiP~~Lp~~vt~~la~~~~~m----------a~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~ 359 (995)
T 3ar4_A 291 -RGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRM----------AKKNAIVRSLPSVETLGCTSVICSDKTGTLTT 359 (995)
T ss_dssp -HHHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HHTTEEESCTTHHHHHHTCCEEEEESTTTTBC
T ss_pred -HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH----------CCCCCEECCCHHHHHHCCCEEEEECCCCCCCC
T ss_conf -9999999999999998667604899999999999984----------41784861341555503833997658887665
Q ss_pred ECEEEEEEEECCEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 00279999993830379970788999986200525554432100147999731010000358998632345787656500
Q 001836 429 NQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSR 508 (1008)
Q Consensus 429 n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (1008)
|+|+|.++++.+..++..... . .....+ .++......
T Consensus 360 n~m~v~~~~~~~~~~~~~~~~-~----------------------------~~~~~~--------------~~~~p~~~~ 396 (995)
T 3ar4_A 360 NQMSVCKMFIIDKVDGDFCSL-N----------------------------EFSITG--------------STYAPEGEV 396 (995)
T ss_dssp CCCEEEEEEEEEEEETTEEEE-E----------------------------EEEECC--------------SSSSSCCCE
T ss_pred CCEEEEEEEECCCCCCCCCCC-C----------------------------EEECCC--------------CCCCCCCCC
T ss_conf 856999998347556765543-0----------------------------254047--------------776886310
Q ss_pred HCCCCCCCCCCHHHHHHHHHHHHHHCCEECCCCCCCCCEEEECCCCCHHHHHHHHHHCCCEEEEECCCEEEEEECCCCCC
Q ss_conf 00668889998478999999983104302023589997378428950999999999889499977398599994289999
Q 001836 509 LMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKG 588 (1008)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~la~C~~~~~~~~~~~~~~~y~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~ 588 (1008)
...+..........+.+++.++++||++....++.. ......++|+|.|++.++++.|+ +.. ....+...+......
T Consensus 397 ~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~-~~~~~~g~p~E~Al~~~a~~~g~-~~~-~~~~i~~~~~~~~~~ 473 (995)
T 3ar4_A 397 LKNDKPIRSGQFDGLVELATICALCNDSSLDFNETK-GVYEKVGEATETALTTLVEKMNV-FNT-EVRNLSKVERANACN 473 (995)
T ss_dssp EETTEECCGGGCHHHHHHHHHHHHSCCCEEEEETTT-TEEEEESCHHHHHHHHHHHHHCT-TCC-CCTTSCTTTSTTHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC-CCEEECCCCCHHHHHHHHHHCCC-CCC-CCCCCCCCCCCCCCH
T ss_conf 136643444455899999999987488805656889-83255479647999999998399-641-000134201012101
Q ss_pred CCCEEEEEEEEEECCCCCCCEEEEEEECCCC-----CEEEEECCCHHHHHHHHCCC---------CCCCHHHHHHHHHHH
Q ss_conf 8622799897730798997168999980899-----29999836604667752027---------421389999999999
Q 001836 589 QPVEREFKILNLLDFTSKRKRMSVIVRDEDG-----QILLLCKGADSIIFDRLSKN---------GRMYEEATTKLLNEY 654 (1008)
Q Consensus 589 ~~~~~~~~il~~~~F~s~rkrmsviv~~~~~-----~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~~~~~ 654 (1008)
......|++++.+||+|+||||||+++.++| +..+|+||||+.|+++|... +++.++.+.++++++
T Consensus 474 ~~~~~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~ 553 (995)
T 3ar4_A 474 SVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEW 553 (995)
T ss_dssp HHHHHHEEEEEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHH
T ss_pred HHHHHHCCEEEEEECCCCCCEEEEEEECCCCCCCCCCEEEEECCCHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 55664174577740488887569998348987666444999758879999854054428973249999999999999987
Q ss_pred --HHCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHH
Q ss_conf --835870888899707988999999999998741101899999999997430646976410234468880999999997
Q 001836 655 --GEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQ 732 (1008)
Q Consensus 655 --~~~Glr~l~~A~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~i~i~D~lr~~~~~~I~~L~~ 732 (1008)
+.+|+|||++|||+++..+. ...+ .+. ...+.+|+|++|+|+++++|++|++++++|+.|++
T Consensus 554 ~~a~~GlRvLa~A~k~~~~~~~----------~~~~-~~~-----~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~ 617 (995)
T 3ar4_A 554 GTGRDTLRCLALATRDTPPKRE----------EMVL-DDS-----SRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRD 617 (995)
T ss_dssp HHSTTCCEEEEEEEESSCCCGG----------GCCT-TCG-----GGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHH
T ss_pred HHHHCCCEEEEEEEEECCCCCC----------CCCC-CCC-----HHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHH
T ss_conf 7630561488999983476511----------1222-340-----24455306948999985258896669999999998
Q ss_pred CCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
Q ss_conf 59909999489776699999885744479538999068830389999999998699999978875320179988369999
Q 001836 733 AGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALII 812 (1008)
Q Consensus 733 agIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi 812 (1008)
+||++||+|||+..||.++|+++|+...+..+ . ..++
T Consensus 618 ~Gi~v~miTGD~~~ta~~ia~~lgi~~~~~~i------~-------------------------------------~~~~ 654 (995)
T 3ar4_A 618 AGIRVIMITGDNKGTAIAICRRIGIFGENEEV------A-------------------------------------DRAY 654 (995)
T ss_dssp TTCEEEEEESSCHHHHHHHHHHHTSSCTTCCC------T-------------------------------------TTEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHCCCCCCCCCC------C-------------------------------------CEEE
T ss_conf 69989998999789999999983967788753------5-------------------------------------3489
Q ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEECCCCCH
Q ss_conf 26014587259999999832202891599990846399999999611699099953896886666624711895167400
Q 001836 813 EGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGM 892 (1008)
Q Consensus 813 ~g~~l~~~~~~~~~~~f~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~vl~iGDG~ND~~ml~~AdvGI~i~g~~~~ 892 (1008)
+|+.+....++++.+... +..+|||++|+||..+|+.+++ .|+.|+|+|||.||++||++||+||||+ +...
T Consensus 655 ~g~~~~~l~~~~~~~~~~------~~~v~~r~~P~~K~~~v~~l~~-~g~~v~~~GDG~ND~~alk~Advgiamg-~g~~ 726 (995)
T 3ar4_A 655 TGREFDDLPLAEQREACR------RACCFARVEPSHKSKIVEYLQS-YDEITAMTGDGVNDAPALKKAEIGIAMG-SGTA 726 (995)
T ss_dssp EHHHHHTSCHHHHHHHHH------HCCEEESCCSSHHHHHHHHHHT-TTCCEEEEECSGGGHHHHHHSTEEEEET-TSCH
T ss_pred ECHHHHHCCHHHHHHHHH------HCCEEEEECHHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHCCEEEEEC-CCCH
T ss_conf 836646289999999875------3738997089999999999997-7997999838814499998789679967-8899
Q ss_pred HHHHHCCEEECCHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 142306643032544--789998611338899999899998889999999999997730446313246999999998735
Q 001836 893 QAVMASDFSIAQFRF--LERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTLFYFEAFASFSGQSVYNDWYMLSFNVVLTA 970 (1008)
Q Consensus 893 ~a~~~aD~vi~~~~~--l~~lll~~GR~~~~~~~~~i~~~~~~ni~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~i~~~ 970 (1008)
.|+.+||+++.++++ +..+ +.|||+.|.|+++++.|.+++|+..+++.+++.++.. ..++.+++++|+|++++.
T Consensus 727 ~ak~aAd~vl~~~~~~~i~~~-i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~~g~---~~pl~~~qil~~nl~~d~ 802 (995)
T 3ar4_A 727 VAKTASEMVLADDNFSTIVAA-VEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGL---PEALIPVQLLWVNLVTDG 802 (995)
T ss_dssp HHHHTCSEEETTCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC---CCSSCHHHHHHHHHTTTH
T ss_pred HHHHHCCEEECCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCHHHHHHHHHHHHHHHH
T ss_conf 999738899777877899999-9998999999999999999999999999999999847---625789999999999988
Q ss_pred HHHHHHHHCCCCCCHHHHHHCCCCCH
Q ss_conf 67885541156799277741597742
Q 001836 971 LPVISLGVFEQDVSSEICLQVRPADE 996 (1008)
Q Consensus 971 lp~~~~~~~~~d~~~~~~~~~P~ly~ 996 (1008)
+|++++|+++.+ ++.+.+.|..++
T Consensus 803 ~p~l~l~~~~~~--~~~m~~~P~~~~ 826 (995)
T 3ar4_A 803 LPATALGFNPPD--LDIMDRPPRSPK 826 (995)
T ss_dssp HHHHHHTTCCCC--TTGGGSCCCCTT
T ss_pred HHHHHHCCCCCC--HHHHHCCCCCCC
T ss_conf 777763067777--568737999976
No 4
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=1.00 E-value=1 Score=800.84 Aligned_cols=639 Identities=19% Similarity=0.216 Sum_probs=505.4
Q ss_pred CCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 77788878996454356512643489999995456898999988621423788884123153678999998699999998
Q 001836 47 HKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWR 126 (1008)
Q Consensus 47 ~~~~~~~yg~N~i~~~ky~~~~flp~~l~~qf~~~~n~~~l~i~il~~~~~~~~~~~~~~~~l~~vi~is~i~~~~~d~~ 126 (1008)
...|+++||+|.+..+++++| +.++.||..|++++++++++++++. ..|... ..++++++++++.+.+++++
T Consensus 93 a~~r~~~~G~N~l~~~~~~~~----~~~l~~f~~~~~~ll~~aai~s~~~---g~~~~~-~~i~~vv~i~~~i~~~qe~~ 164 (920)
T 1mhs_A 93 VVQRRRKYGLNQMKEEKENHF----LKFLGFFVGPIQFVMEGAAVLAAGL---EDWVDF-GVICGLLLLNAVVGFVQEFQ 164 (920)
T ss_dssp HHHHHHHTSSSSCCCCCCSSH----HHHTHHHHHHHHHHHHHHHHHCTTC---SCSSHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCCCCCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_conf 999999639981588888899----9999999879999999999999999---768999-99999999999999999999
Q ss_pred HHHCHHHHHC---CEEEEEECCCEEEEECCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCEEEE
Q ss_conf 4210398733---0889996686375305668975829994169713760999732189853999703677877743330
Q 001836 127 RFMQDKEVNA---RKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKR 203 (1008)
Q Consensus 127 r~k~~~~~n~---~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPAD~iiL~ss~~~g~~~Vd~s~LtGEs~~~~K~ 203 (1008)
..++.+.+++ .+++|+ |||++++|++++|+|||||.|++||.||||+++++++ +.+.||||+|||||.|+.|.
T Consensus 165 a~~a~~~L~~l~~~~a~V~-RdG~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g~---~~l~VDES~LTGES~PV~K~ 240 (920)
T 1mhs_A 165 AGSIVDELKKTLALKAVVL-RDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDD---AFLQVDQSALTGESLAVDKH 240 (920)
T ss_dssp HHHHHHTTTTCCCSSCEEE-CSSSEEECCTTTSCTTSEEEECTTCBCSSEEEEEEES---SCCEEBCTTTSSCCCCEECC
T ss_pred HHHHHHHHHCCCCCEEEEE-ECCEEEEEEHHHCCCCCEEEECCCCCCCCCEEEEECC---CEEEEECCCCCCCCCCEEEC
T ss_conf 9999998633599879999-8998999898995889789967797336656999457---22320222247888646934
Q ss_pred CCCCCCCCCCHHHHCCCCEEEEECCCCCCCCEEEEEEEECCEEEECCCCCEEECCCEEECCCEEEEEEEEECCCCCEECC
Q ss_conf 45557999965555048169995089999505799999889253049897141360772188599999984375200004
Q 001836 204 AMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQN 283 (1008)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tk~~~~ 283 (1008)
+++.. |+||.+.+|. +.++|++||.+|.++++
T Consensus 241 ~gd~v---------------------------~sGT~v~~G~---------------------~~~~V~~tG~~T~~g~I 272 (920)
T 1mhs_A 241 KGDQV---------------------------FASSAVKRGE---------------------AFVVITATGDNTFVGRA 272 (920)
T ss_dssp SSCEE---------------------------CSCBCCSCCC---------------------EEEEEEECSTTCSTTTT
T ss_pred CCCEE---------------------------ECCCEEECCE---------------------EEEEEEEECCCCHHHHH
T ss_conf 79863---------------------------0376695135---------------------99999995776788899
Q ss_pred C---CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 8---9999964479999989999999999999999988553001257997421378898643599998665899999999
Q 001836 284 A---TTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTAL 360 (1008)
Q Consensus 284 ~---~~~~~k~s~l~~~~~~~~~~~~~~~i~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 360 (1008)
. ..++.+++++++.++++..+++++.++++++.++.+ |+.. ......|.+++
T Consensus 273 ~~lv~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~~~~~-----------~~~~--------------~~~~~~l~~av 327 (920)
T 1mhs_A 273 AALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVWVSS-----------FYRS--------------NPIVQILEFTL 327 (920)
T ss_dssp TSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----------TTTT--------------CCHHHHHHHHH
T ss_pred HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHCC--------------CCHHHHHHHHH
T ss_conf 8877642467764999999999999999999999999998-----------8468--------------86999999999
Q ss_pred HHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEEECCCCCEEEECEEEEEEEECC
Q ss_conf 99702120034888999999999998301126446679865213443011012505999759871122002799999938
Q 001836 361 ILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAG 440 (1008)
Q Consensus 361 ~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~ 440 (1008)
.+++.+|||+|+++++++...++.++ +++++++|+++.+|.||++++||||||||||+|+|.+.+++..+
T Consensus 328 ~llV~aiP~aLp~~vti~la~g~~~m----------ak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~ 397 (920)
T 1mhs_A 328 AITIIGVPVGLPAVVTTTMAVGAAYL----------AKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVA 397 (920)
T ss_dssp HHHHHHSCCCHHHHHHHHHHHHHHHH----------HHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCCBCCS
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHHHH----------HHCCEEEECCCHHHHHCCCCEEEECCCCCCCCCCEEEEEEEECC
T ss_conf 99987676037777899999999999----------86883870571355543676899778887555531699985069
Q ss_pred EECCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCH
Q ss_conf 30379970788999986200525554432100147999731010000358998632345787656500006688899984
Q 001836 441 TAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNV 520 (1008)
Q Consensus 441 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (1008)
. + .+
T Consensus 398 g-~-------------------------------------------------------------------------~~-- 401 (920)
T 1mhs_A 398 G-V-------------------------------------------------------------------------DP-- 401 (920)
T ss_dssp C-C-------------------------------------------------------------------------CC--
T ss_pred C-C-------------------------------------------------------------------------CH--
T ss_conf 9-8-------------------------------------------------------------------------98--
Q ss_pred HHHHHHHHHHHHHCCEECCCCCCCCCEEEECCCCCHHHHHHHHHHCCCEEEEECCCEEEEEECCCCCCCCCEEEEEEEEE
Q ss_conf 78999999983104302023589997378428950999999999889499977398599994289999862279989773
Q 001836 521 DTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNL 600 (1008)
Q Consensus 521 ~~~~~~~~~la~C~~~~~~~~~~~~~~~y~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~ 600 (1008)
.+++.+.++|+.... ..+||.|.|+++++++.+... + ....|++++.
T Consensus 402 ---~~ll~~a~l~~~~~~-----------~~~~P~e~Al~~~~~~~~~~~-----------------~--~~~~~~~~~~ 448 (920)
T 1mhs_A 402 ---EDLMLTACLAASRKK-----------KGIDAIDKAFLKSLKYYPRAK-----------------S--VLSKYKVLQF 448 (920)
T ss_dssp ---THHHHHHHHSCCCSS-----------CSCCSHHHHHHHHHHHSSSCC-----------------G--GGSCCCEEEE
T ss_pred ---HHHHHHHHHHCCCCC-----------CCCCHHHHHHHHHHHHCCCCH-----------------H--HCCCCCEEEE
T ss_conf ---999999998547766-----------689858999999999646310-----------------1--0135533578
Q ss_pred ECCCCCCCEEEEEEECCCCCEEEEECCCHHHHHHHHCCC---CCCCHHHHHHHHHHHHHCCCEEEEEEEEECCHHHHHHH
Q ss_conf 079899716899998089929999836604667752027---42138999999999983587088889970798899999
Q 001836 601 LDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKN---GRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAW 677 (1008)
Q Consensus 601 ~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l~~~~~~~~ 677 (1008)
+||+|.||||+++++.++|+.++|+||||+.|+++|... +++..+.+.+.+++++.+|+|++++|+|..
T Consensus 449 ~pF~s~~k~ms~iv~~~~g~~~~~~KGape~il~~c~~~~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~~-------- 520 (920)
T 1mhs_A 449 HPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKRG-------- 520 (920)
T ss_dssp EEEETTTTEEEEEECCSSSSCEEEEEECHHHHHHHCCCSSCCCHHHHHHHHHHHHHHHTSSCCCCEECCCSS--------
T ss_pred EECCCCCCEEEEEEEECCCCEEEEEECCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECC--------
T ss_conf 611677885999999679918999908799999861356789878899899999999867997999998326--------
Q ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 99999987411018999999999974306469764102344688809999999975990999948977669999988574
Q 001836 678 NSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSL 757 (1008)
Q Consensus 678 ~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~i~i~D~lr~~~~~~I~~L~~agIkv~ilTGD~~~ta~~ia~~~gi 757 (1008)
|.+++|+|+++++||+|++++++|+.|+++||++||+|||+..||.+||+++||
T Consensus 521 --------------------------e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI 574 (920)
T 1mhs_A 521 --------------------------EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGL 574 (920)
T ss_dssp --------------------------SCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTS
T ss_pred --------------------------CCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCC
T ss_conf --------------------------653078899997343210179999998625744999838978999999998499
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 44795389990688303899999999986999999788753201799883699992601458725999999983220289
Q 001836 758 LRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECA 837 (1008)
Q Consensus 758 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~f~~~~~~~~ 837 (1008)
..... +... ++++|.. ...+++ +.+... +
T Consensus 575 ~~~~~-----~~~~--------------------------------------~~~~g~~--~~~~~e----l~~~~~--~ 603 (920)
T 1mhs_A 575 GTNIY-----NAER--------------------------------------LGLGGGG--DMPGSE----VYDFVE--A 603 (920)
T ss_dssp SCSCC-----CSSS--------------------------------------SSSCBCC--CGGGGG----GGTTTT--T
T ss_pred CCCCC-----CCCC--------------------------------------EEECCCC--CCCHHH----HHHHHH--H
T ss_conf 96546-----7541--------------------------------------2422765--589899----998775--1
Q ss_pred EEEEEEECHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEECCCCCHHHHHHCCEEECCHHH--HHHHHHHH
Q ss_conf 1599990846399999999611699099953896886666624711895167400142306643032544--78999861
Q 001836 838 SVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQFRF--LERLLVVH 915 (1008)
Q Consensus 838 ~~i~~r~~p~qK~~iv~~lk~~~~~~vl~iGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~vi~~~~~--l~~lll~~ 915 (1008)
..+|+|++|+||..+|+.+|+ .|+.|+|+|||.||++||+.||+||||+ +....++.+||+++.++++ +... +.+
T Consensus 604 ~~V~arv~P~~K~~iV~~Lq~-~g~~Vam~GDGvNDapaLk~AdvGIAmg-~gtd~ak~aADiVl~~~~~~~I~~a-i~~ 680 (920)
T 1mhs_A 604 ADGFAEVFPQHKYNVVEILQQ-RGYLVAMTGDGVNDAPSLKKADTGIAVE-GSSDAARSAADIVFLAPGLGAIIDA-LKT 680 (920)
T ss_dssp TSCEESCCSTHHHHHHHHHHT-TTCCCEECCCCGGGHHHHHHSSEEEEET-TSCHHHHHSSSEEESSCCSHHHHHH-HHH
T ss_pred CEEEEEECHHHHHHHHHHHHH-CCCEEEEECCCCCCHHHHHHCCCCCCCC-CCCHHHHHHCCEEECCCCHHHHHHH-HHH
T ss_conf 819998379999999999996-7996999828810099998578674056-4339999846807767977789999-999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 1338899999899998889999999999997730446313246999999998735678855411567
Q 001836 916 GHWCYKRIAQMICYFFYKNIAFGLTLFYFEAFASFSGQSVYNDWYMLSFNVVLTALPVISLGVFEQD 982 (1008)
Q Consensus 916 GR~~~~~~~~~i~~~~~~ni~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~i~~~lp~~~~~~~~~d 982 (1008)
||+.|.|+++++.|.++.|+.+.+..+++..+. +.+ +++.+++|.|++.+. |++++++.+.+
T Consensus 681 gR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~---~~~-l~~~~il~~~l~~d~-~~lal~~e~~~ 742 (920)
T 1mhs_A 681 SRQIFHRMYAYVVYRIALSIHLEIFLGLWIAIL---NRS-LNIELVVFIAIFADV-ATLAIAYDNAP 742 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC---SCC-CCHHHHHHHHHHHTT-HHHHCCCCCSG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HCC-CCHHHHHHHHHHHHH-HHHHHCCCCCC
T ss_conf 999999999987889799999999999999999---616-879999999999877-76651356764
No 5
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}
Probab=1.00 E-value=1 Score=791.15 Aligned_cols=644 Identities=18% Similarity=0.197 Sum_probs=494.0
Q ss_pred CCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC----CCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 77778887899645435651264348999999545689899998862142378----88841231536789999986999
Q 001836 46 MHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLS----PFSPVSMLLPLAIVVGVSMAKEA 121 (1008)
Q Consensus 46 ~~~~~~~~yg~N~i~~~ky~~~~flp~~l~~qf~~~~n~~~l~i~il~~~~~~----~~~~~~~~~~l~~vi~is~i~~~ 121 (1008)
+...|+++||+|.+..++++.| +.+++||.+|++++++++++++++... +..|...+ .++++++++.+.+.
T Consensus 37 e~~~r~~~~G~N~l~~~~~~~~----~~~l~~~~~p~~~il~~aaiis~~l~~~~~~~~~~~~~~-~I~~~v~i~~~l~~ 111 (885)
T 3b8c_A 37 EGEDRIQIFGPNKLEEKKESKL----LKFLGFMWNPLSWVMEMAAIMAIALANGDGRPPDWQDFV-GIICLLVINSTISF 111 (885)
T ss_dssp HHHHHSSSCCSCCTTTTCCCTT----SSTTSCCCGGGSSHHHHHHHGGGGSSCCTTSCSCCTTHH-HHHHHTTTTTTTTT
T ss_pred HHHHHHHHCCCCCCCCCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH-HHHHHHHHHHHHHH
T ss_conf 9999998519971588788799----999999999999999999999999970456630188999-99999999999999
Q ss_pred HHHHHHHHCHHHHH---CCEEEEEECCCEEEEECCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCC
Q ss_conf 99998421039873---308899966863753056689758299941697137609997321898539997036778777
Q 001836 122 LEDWRRFMQDKEVN---ARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETN 198 (1008)
Q Consensus 122 ~~d~~r~k~~~~~n---~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPAD~iiL~ss~~~g~~~Vd~s~LtGEs~ 198 (1008)
+++++..++.+.+. ..+++|+ |||++++|++++|+|||||.|++||.||||+++++++. +.||||+|||||.
T Consensus 112 ~qe~ka~~al~~L~~~~~~~a~V~-RdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~ll~g~~----l~VdES~LTGES~ 186 (885)
T 3b8c_A 112 IEENNAGNAAAALMAGLAPKTKVL-RDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDP----LKVDQSALTGESL 186 (885)
T ss_dssp TTTTTTTTHHHHTTTSCSCCCCCC-CSSCSCCCCTTTTCTTSBCCCCSSCCCSSCCCCCCSSC----BCCCCCSTTCCSS
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEE-ECCEEEEEEHHHCCCCCEEEECCCCEEEECEEEEECCC----CCCCCCCCCCCCC
T ss_conf 999999999999733499869999-99989998989979897899889999930359997675----4003444688886
Q ss_pred CEEEECCCCCCCCCCHHHHCCCCEEEEECCCCCCCCEEEEEEEECCEEEECCCCCEEECCCEEECCCEEEEEEEEECCCC
Q ss_conf 43330455579999655550481699950899995057999998892530498971413607721885999999843752
Q 001836 199 LKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDS 278 (1008)
Q Consensus 199 ~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~T 278 (1008)
|+.|.+++.. |+||.+.+|. +.++|++||.+|
T Consensus 187 Pv~K~~g~~v---------------------------~~GT~v~~G~---------------------~~~~V~~tG~~T 218 (885)
T 3b8c_A 187 PVTKHPGQEV---------------------------FSGSTCKQGE---------------------IEAVVIATGVHT 218 (885)
T ss_dssp CCCBSSCCCC---------------------------CSCCCCCSCC---------------------CCCBCCSCTTTT
T ss_pred CEEECCCCCC---------------------------CCCEEEEEEE---------------------EEEEEEECCCCC
T ss_conf 4583489830---------------------------2675995117---------------------999999757301
Q ss_pred CEECCCC--CCCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 0000489--9999644799999899999999-999999999885530012579974213788986435999986658999
Q 001836 279 KVMQNAT--TSPSKRSGIEKKMDKIIFILFA-ILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAH 355 (1008)
Q Consensus 279 k~~~~~~--~~~~k~s~l~~~~~~~~~~~~~-~~i~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (1008)
.+++... ....+++++++.++++..+++. +.+.++++.++.+.+.. ..|. ..
T Consensus 219 ~~g~i~~lv~~~~~~~~lq~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~--------------------~~ 273 (885)
T 3b8c_A 219 FFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQR-----RKYR--------------------DG 273 (885)
T ss_dssp TSTTCCCSCCSCSCCSTTTTTTHHHHHHHHHHHHHHHHHHSTTTTTTTC-----SCST--------------------TH
T ss_pred HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CCHH--------------------HH
T ss_conf 9999999986464468499999999999999999999999999999806-----8699--------------------99
Q ss_pred HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEEECCCCCEEEECEEEEE
Q ss_conf 99999997021200348889999999999983011264466798652134430110125059997598711220027999
Q 001836 356 LVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLK 435 (1008)
Q Consensus 356 ~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~ 435 (1008)
+.+++.+++.+||++||+++++....++.++ +++++++|+++.+|+||++++||||||||||+|+|++.+
T Consensus 274 ~~~~v~llv~aiP~aLp~~vti~la~g~~r~----------ak~~ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~ 343 (885)
T 3b8c_A 274 IDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL----------SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDK 343 (885)
T ss_dssp HHHHHHHTTTTCCSSTTTHHHHTTTHHHHHH----------TTTSCCCSSGGGHHHHTTCCCCEEECCCCCSCCCCCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHCCEEECCCHHHHHHHCCCEEEECCCCCCCCCCEEEEE
T ss_conf 9999999999703689999999999999999----------719869689518889767998998799876168527998
Q ss_pred EEECCEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCC
Q ss_conf 99938303799707889999862005255544321001479997310100003589986323457876565000066888
Q 001836 436 CSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWL 515 (1008)
Q Consensus 436 ~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (1008)
+.+. .++.+
T Consensus 344 ~~~~--~~~~~--------------------------------------------------------------------- 352 (885)
T 3b8c_A 344 NLVE--VFCKG--------------------------------------------------------------------- 352 (885)
T ss_dssp CCCC--SSCSS---------------------------------------------------------------------
T ss_pred EEEE--CCCCC---------------------------------------------------------------------
T ss_conf 7775--15899---------------------------------------------------------------------
Q ss_pred CCCCHHHHHHHHHHHHHHCCEECCCCCCCCCEEEECCCCCHHHHHHHHHHCCCEEEEECCCEEEEEECCCCCCCCCEEEE
Q ss_conf 99984789999999831043020235899973784289509999999998894999773985999942899998622799
Q 001836 516 KEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREF 595 (1008)
Q Consensus 516 ~~~~~~~~~~~~~~la~C~~~~~~~~~~~~~~~y~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 595 (1008)
....+++.+.++|+... ++||.|.|+++++.+.. . ....+
T Consensus 353 -----~~~~~ll~~aa~~~~~~-------------~~~p~~~Al~~~~~~~~--------------------~--~~~~~ 392 (885)
T 3b8c_A 353 -----VEKDQVLLFAAMASRVE-------------NQDAIDAAMVGMLADPK--------------------E--ARAGI 392 (885)
T ss_dssp -----TTHHHHHHHHHHHCCSS-------------SCCSHHHHHHHTTCCTT--------------------C--CCCSS
T ss_pred -----CCHHHHHHHHHHHHCCC-------------CCCCHHHHHHHHHHCHH--------------------H--HHHCC
T ss_conf -----99999999999972788-------------99915899999864636--------------------5--76248
Q ss_pred EEEEEECCCCCCCEEEEEEECCCCCEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCHHHHH
Q ss_conf 89773079899716899998089929999836604667752027421389999999999835870888899707988999
Q 001836 596 KILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYS 675 (1008)
Q Consensus 596 ~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l~~~~~~ 675 (1008)
++++.+||+|.||||+++++..+|+.++|+||||+.++++|.... ..++.+.+.+++++.+|+|++++|+|++++.+
T Consensus 393 ~~~~~~pF~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~-~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~-- 469 (885)
T 3b8c_A 393 REVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELAKASN-DLSKKVLSIIDKYAERGLRSLAVARQVVPEKT-- 469 (885)
T ss_dssp CCBCCCCCCTTTCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCCCS-TTTTTHHHHHHHHTTTTCEEEEECCBCCCSSS--
T ss_pred CEEECCCCCCCCCEEEEEEEECCCCEEEEEECCHHHHHHHCCCCH-HHHHHHHHHHHHHHHCCCEEEEEEEECCCCCC--
T ss_conf 322013578522568999980489689999488999997645864-45799999999998579869999994466433--
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 99999999874110189999999999743064697641023446888099999999759909999489776699999885
Q 001836 676 AWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFAC 755 (1008)
Q Consensus 676 ~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~i~i~D~lr~~~~~~I~~L~~agIkv~ilTGD~~~ta~~ia~~~ 755 (1008)
+ +..|++++|+|+++++||+|++++++|+.|+++||++||+|||+..||.++|+++
T Consensus 470 ----------------~--------~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~l 525 (885)
T 3b8c_A 470 ----------------K--------ESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 525 (885)
T ss_dssp ----------------S--------SCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTT
T ss_pred ----------------C--------CCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHH
T ss_conf ----------------1--------1135675799999960666120899999999769968999399869999999980
Q ss_pred CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHH-HHHHHHHHHHHC
Q ss_conf 7444795389990688303899999999986999999788753201799883699992601458725-999999983220
Q 001836 756 SLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALE-DDMKHHFLGLAV 834 (1008)
Q Consensus 756 gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~-~~~~~~f~~~~~ 834 (1008)
|+..+... .. ++.|..++..+. .++.+.. .
T Consensus 526 Gi~~~~~~-----~~----------------------------------------~l~g~~~~~~~~~~~l~~~~----~ 556 (885)
T 3b8c_A 526 GMGTNMYP-----SS----------------------------------------ALLGTHKDANLASIPVEELI----E 556 (885)
T ss_dssp TCTTCCST-----TS----------------------------------------SCCBGGGGTTSCCSCHHHHH----H
T ss_pred CCCCCCCC-----CC----------------------------------------EEECCCCCCCCCHHHHHHHH----H
T ss_conf 97646677-----51----------------------------------------44555312224635799998----6
Q ss_pred CCCEEEEEEECHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEECCCCCHHHHHHCCEEECCHHH--HHHHH
Q ss_conf 2891599990846399999999611699099953896886666624711895167400142306643032544--78999
Q 001836 835 ECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSIAQFRF--LERLL 912 (1008)
Q Consensus 835 ~~~~~i~~r~~p~qK~~iv~~lk~~~~~~vl~iGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~vi~~~~~--l~~ll 912 (1008)
+..+|+|++|+||..+|+.+|+ .|+.|+|+|||.||++||+.||+||||+ +....|+.+||+++.++++ +...
T Consensus 557 --~~~v~arv~P~~K~~iV~~lq~-~g~~Vam~GDGvNDapaLk~AdvGIAmg-~gtd~ak~aADivl~~~~~~~I~~a- 631 (885)
T 3b8c_A 557 --KADGFAGVFPEHKYEIVKKLQE-RKHIVGMTGDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIISA- 631 (885)
T ss_dssp --TSCCEECCCHHHHHHHHHHHHH-TTCCCCBCCCSSTTHHHHHHSSSCCCCS-SSHHHHGGGCSSCCSSCSHHHHTHH-
T ss_pred --HCCEEEEECHHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHCCEEEEEC-CCCHHHHHHCCEEECCCCHHHHHHH-
T ss_conf --3868988789999999999997-7996999759812299998699759957-7129999843401335766689999-
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 8611338899999899998889999999999997730446313246999999998735678855411
Q 001836 913 VVHGHWCYKRIAQMICYFFYKNIAFGLTLFYFEAFASFSGQSVYNDWYMLSFNVVLTALPVISLGVF 979 (1008)
Q Consensus 913 l~~GR~~~~~~~~~i~~~~~~ni~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~i~~~lp~~~~~~~ 979 (1008)
+.+||+.|.|+++++.|.+..|+..++..++..+ ++. .++.+++++|.|++.+..+ +.++..
T Consensus 632 i~~gR~~~~ni~~~i~~~l~~n~~~~~~~~~~~~--~~~--~~l~p~~il~i~l~~d~~~-l~l~~~ 693 (885)
T 3b8c_A 632 VLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIAL--IWE--FDFSAFMVLIIAILNDGTI-MTISKD 693 (885)
T ss_dssp HHTHHHHHHHHHHHHHHHHHHTTTTTSTTHHHHS--SCS--SCSCHHHHHHHHHHHHTTT-CCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCC--CCCCHHHHHHHHHHHHHHH-HHHCCC
T ss_conf 9999999999999999999999999999999997--038--6758899999999987778-740465
No 6
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}
Probab=1.00 E-value=1 Score=604.19 Aligned_cols=527 Identities=19% Similarity=0.219 Sum_probs=415.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCHHHHH------CCEEEEEECCCEEEEECCCCCCCCCEEEECCCCCCCCEEEEEEECCC
Q ss_conf 678999998699999998421039873------30889996686375305668975829994169713760999732189
Q 001836 109 LAIVVGVSMAKEALEDWRRFMQDKEVN------ARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYE 182 (1008)
Q Consensus 109 l~~vi~is~i~~~~~d~~r~k~~~~~n------~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPAD~iiL~ss~~ 182 (1008)
..+++++..+..++|.+.++|+.+.++ ..+++|++|+|++++|++++|+|||||+|++||.||||+++++
T Consensus 191 a~~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~vl~---- 266 (736)
T 3rfu_A 191 AAVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQE---- 266 (736)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEECS----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEHHHCCCCCEEEECCCCCCCCCEEEEE----
T ss_conf 9999999999999999999999999999883399889999529989998776689898899879975156379997----
Q ss_pred CCEEEEECCCCCCCCCCEEEECCCCCCCCCCHHHHCCCCEEEEECCCCCCCCEEEEEEEECCEEEECCCCCEEECCCEEE
Q ss_conf 85399970367787774333045557999965555048169995089999505799999889253049897141360772
Q 001836 183 DGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLR 262 (1008)
Q Consensus 183 ~g~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~ 262 (1008)
|.++||||+|||||.|+.|.+++.. |+||++.+|.
T Consensus 267 -G~~~VDES~LTGES~Pv~K~~gd~v---------------------------~~Gt~~~~G~----------------- 301 (736)
T 3rfu_A 267 -GRSFVDESMVTGEPIPVAKEASAKV---------------------------IGATINQTGS----------------- 301 (736)
T ss_dssp -SCEEEECSSSTTCSSCEEECTTCEE---------------------------CTTCEEESCC-----------------
T ss_pred -CCEEEEECCCCCCCCCEEECCCCCC---------------------------CCCEEECCCE-----------------
T ss_conf -8667651235786142783168867---------------------------7864861450-----------------
Q ss_pred CCCEEEEEEEEECCCCCE---ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCC
Q ss_conf 188599999984375200---00489999964479999989999999999999999988553001257997421378898
Q 001836 263 NTAHVYGSVIFTGHDSKV---MQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKET 339 (1008)
Q Consensus 263 nt~~~~gvVv~tG~~Tk~---~~~~~~~~~k~s~l~~~~~~~~~~~~~~~i~~~~i~~i~~~~~~~~~~~~~~~~~~~~~ 339 (1008)
+.+.|++||.+|.+ .++...++.+++++++..+++..+++++.++++++.++++.++.... .|
T Consensus 302 ----~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~~~~~w~~~~~~~---~~------- 367 (736)
T 3rfu_A 302 ----FVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSFIVWALLGPQP---AL------- 367 (736)
T ss_dssp ----CCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSS---ST-------
T ss_pred ----EEEEEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---HH-------
T ss_conf ----9999998412259999999999743268979999999999999999999999999999967873---29-------
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEE
Q ss_conf 64359999866589999999999702120034888999999999998301126446679865213443011012505999
Q 001836 340 DVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTIL 419 (1008)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~e~Lg~v~~i~ 419 (1008)
...+.+++.+++.+|||+|+++++++...+..++ +++++++|+++.+|.||++++||
T Consensus 368 -------------~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~----------a~~gilvk~~~alE~l~~v~~i~ 424 (736)
T 3rfu_A 368 -------------SYGLIAAVSVLIIACPCALGLATPMSIMVGVGKG----------AQSGVLIKNAEALERMEKVNTLV 424 (736)
T ss_dssp -------------THHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHH----------HHTTEEESCHHHHHHHTSCCEEE
T ss_pred -------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHCCEEECHHHHHHHHCCCCEEE
T ss_conf -------------9999998774877324278888999999999997----------51513323378999862799999
Q ss_pred ECCCCCEEEECEEEEEEEECCEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCC
Q ss_conf 75987112200279999993830379970788999986200525554432100147999731010000358998632345
Q 001836 420 SDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRI 499 (1008)
Q Consensus 420 ~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (1008)
||||||||+|+|++.++...+.. +
T Consensus 425 fDKTGTLT~g~~~v~~i~~~~~~------~-------------------------------------------------- 448 (736)
T 3rfu_A 425 VDKTGTLTEGHPKLTRIVTDDFV------E-------------------------------------------------- 448 (736)
T ss_dssp ECCBTTTBCSSCEEEEEEESSSC------H--------------------------------------------------
T ss_pred EECCCCCCCCCEEEEEEEECCCC------H--------------------------------------------------
T ss_conf 81898875895279999834887------7--------------------------------------------------
Q ss_pred CCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCEECCCCCCCCCEEEECCCCCHHHHHHHHHHCCCEEEEECCCEEE
Q ss_conf 78765650000668889998478999999983104302023589997378428950999999999889499977398599
Q 001836 500 KGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVF 579 (1008)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~C~~~~~~~~~~~~~~~y~~~sp~e~al~~~a~~~g~~~~~~~~~~~~ 579 (1008)
.+++...+.+ ++.++||++.|++++++..|+.+.
T Consensus 449 ------------------------~~~l~~aa~l--------------e~~s~hPla~Aiv~~a~~~~~~~~-------- 482 (736)
T 3rfu_A 449 ------------------------DNALALAAAL--------------EHQSEHPLANAIVHAAKEKGLSLG-------- 482 (736)
T ss_dssp ------------------------HHHHHHHHHH--------------HHSSCCHHHHHHHHHHHTTCCCCC--------
T ss_pred ------------------------HHHHHHHHHH--------------HHCCCCHHHHHHHHHHHHCCCCCC--------
T ss_conf ------------------------8999999998--------------622899289999999996599866--------
Q ss_pred EEECCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 99428999986227998977307989971689999808992999983660466775202742138999999999983587
Q 001836 580 IRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGL 659 (1008)
Q Consensus 580 i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Gl 659 (1008)
...+|++.+++... .. .+|+ .+.+|+++.+.+.... .....+..++++.+|+
T Consensus 483 -------------------~~~~f~~~~g~gv~-~~-~~g~--~~~~G~~~~~~~~~~~-----~~~~~~~~~~~~~~G~ 534 (736)
T 3rfu_A 483 -------------------SVEAFEAPTGKGVV-GQ-VDGH--HVAIGNARLMQEHGGD-----NAPLFEKADELRGKGA 534 (736)
T ss_dssp -------------------CCSCCCCCTTTEEE-EC-SSSS--CEEEESHHHHHHHCCC-----CHHHHHHHHHHHHTTC
T ss_pred -------------------CCCCCCCCCCCEEE-EE-ECCE--EEEECCHHHHHHCCCC-----HHHHHHHHHHHHHCCC
T ss_conf -------------------75432024886589-99-9998--9997389999873997-----1678999999985698
Q ss_pred EEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEE
Q ss_conf 08888997079889999999999987411018999999999974306469764102344688809999999975990999
Q 001836 660 RTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWV 739 (1008)
Q Consensus 660 r~l~~A~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~i~i~D~lr~~~~~~I~~L~~agIkv~i 739 (1008)
|++++| .|.+++|+++++|++|++++++|+.|+++|++++|
T Consensus 535 ~vl~va---------------------------------------~d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~m 575 (736)
T 3rfu_A 535 SVMFMA---------------------------------------VDGKTVALLVVEDPIKSSTPETILELQQSGIEIVM 575 (736)
T ss_dssp EEEEEE---------------------------------------ETTEEEEEEEEECCBCSSHHHHHHHHHHHTCEEEE
T ss_pred EEEEEE---------------------------------------ECCEEEEEEEEECCCHHHHHHHHHHHHHCCCEEEE
T ss_conf 699998---------------------------------------79989999985032203099999999987994999
Q ss_pred ECCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHH
Q ss_conf 94897766999998857444795389990688303899999999986999999788753201799883699992601458
Q 001836 740 LTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAY 819 (1008)
Q Consensus 740 lTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~ 819 (1008)
+|||+..+|..+|+++|+..
T Consensus 576 lTGd~~~~a~~ia~~lgi~~------------------------------------------------------------ 595 (736)
T 3rfu_A 576 LTGDSKRTAEAVAGTLGIKK------------------------------------------------------------ 595 (736)
T ss_dssp ECSSCHHHHHHHHHHHTCCC------------------------------------------------------------
T ss_pred ECCCCHHHHHHHHHHCCCCE------------------------------------------------------------
T ss_conf 87989899999999859987------------------------------------------------------------
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEECCCCCHHHHHHCC
Q ss_conf 72599999998322028915999908463999999996116990999538968866666247118951674001423066
Q 001836 820 ALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASD 899 (1008)
Q Consensus 820 ~~~~~~~~~f~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~vl~iGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD 899 (1008)
++++++|++|..+|+.+++ .++.|+|+|||.||++||+.||+||+|+ +....++.+||
T Consensus 596 --------------------v~a~~~P~~K~~~v~~l~~-~g~~V~~vGDG~ND~paL~~AdvGIAmg-~g~d~a~~~AD 653 (736)
T 3rfu_A 596 --------------------VVAEIMPEDKSRIVSELKD-KGLIVAMAGDGVNDAPALAKADIGIAMG-TGTDVAIESAG 653 (736)
T ss_dssp --------------------EECSCCHHHHHHHHHHHHH-HSCCEEEEECSSTTHHHHHHSSEEEEES-SSCSHHHHHCS
T ss_pred --------------------EEEECCHHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHHCCEEEEEC-CCCHHHHHHCC
T ss_conf --------------------9970699999999999996-6998999989857699998699779947-86599997699
Q ss_pred EEECCHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC--CCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 43032544--7899986113388999998999988899999999999977304463--1324699999999873567885
Q 001836 900 FSIAQFRF--LERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTLFYFEAFASFSGQ--SVYNDWYMLSFNVVLTALPVIS 975 (1008)
Q Consensus 900 ~vi~~~~~--l~~lll~~GR~~~~~~~~~i~~~~~~ni~~~~~~~~~~~~~~~s~~--~~~~~~~~l~~n~i~~~lp~~~ 975 (1008)
+++.+.+. +... +.+||..++++++.+.|.|.+|++.+.+. . ..+..|.|. ++.-....+.++.+...+.++.
T Consensus 654 ~vl~~~~~~~i~~a-i~~sr~t~~~i~qnl~~a~~yN~~~iplA-a-g~l~p~~G~~l~P~~aa~~m~~Ssv~Vv~nslr 730 (736)
T 3rfu_A 654 VTLLHGDLRGIAKA-RRLSESTMSNIRQNLFFAFIYNVLGVPLA-A-GVLYPLTGLLLSPMIAAAAMALSSVSVIINALR 730 (736)
T ss_dssp EEECSCCSTTHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-TSSTTTSSCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEECCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99926987899999-99999999999999999999999999999-9-878775043132999999997439999999898
No 7
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=1.00 E-value=1 Score=599.53 Aligned_cols=492 Identities=18% Similarity=0.211 Sum_probs=396.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCHHHHH------CCEEEEEECCCEEEEECCCCCCCCCEEEECCCCCCCCEEEEEEECCC
Q ss_conf 678999998699999998421039873------30889996686375305668975829994169713760999732189
Q 001836 109 LAIVVGVSMAKEALEDWRRFMQDKEVN------ARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYE 182 (1008)
Q Consensus 109 l~~vi~is~i~~~~~d~~r~k~~~~~n------~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPAD~iiL~ss~~ 182 (1008)
.++++++..+.+++|++.++|+.+.++ ..+++|+ |+|++++|++++|+|||||.|++||.||||+++++
T Consensus 177 ~~~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~-r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~---- 251 (723)
T 3j09_A 177 SVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVI-RDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVE---- 251 (723)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEE-ETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEE----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE-ECCEEEEEEHHHCCCCCEEEECCCCEEEEEEEEEE----
T ss_conf 9999999999999999999999999988872699756999-89989998989979998999889998856799997----
Q ss_pred CCEEEEECCCCCCCCCCEEEECCCCCCCCCCHHHHCCCCEEEEECCCCCCCCEEEEEEEECCEEEECCCCCEEECCCEEE
Q ss_conf 85399970367787774333045557999965555048169995089999505799999889253049897141360772
Q 001836 183 DGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLR 262 (1008)
Q Consensus 183 ~g~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~ 262 (1008)
|.|+||||+|||||.|+.|.+++.. |+||.+.+|.
T Consensus 252 -G~~~VdeS~LTGES~pv~K~~g~~v---------------------------~~Gt~~~~g~----------------- 286 (723)
T 3j09_A 252 -GESYVDESMISGEPVPVLKSKGDEV---------------------------FGATINNTGV----------------- 286 (723)
T ss_dssp -CCEEEECHHHHCCSSCEEECTTCEE---------------------------CTTCEECSSC-----------------
T ss_pred -CCEEEECCCCCCCCCCEEECCCCEE---------------------------CCCEEEECCC-----------------
T ss_conf -7768860001388764663689823---------------------------0416970672-----------------
Q ss_pred CCCEEEEEEEEECCCC---CEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCC
Q ss_conf 1885999999843752---0000489999964479999989999999999999999988553001257997421378898
Q 001836 263 NTAHVYGSVIFTGHDS---KVMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKET 339 (1008)
Q Consensus 263 nt~~~~gvVv~tG~~T---k~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~i~~~~i~~i~~~~~~~~~~~~~~~~~~~~~ 339 (1008)
+.+.|++||.+| ++.++...++.+++++++.+++++.+++++.++++++.++.+.++.. .+|.
T Consensus 287 ----~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~----~~~~------ 352 (723)
T 3j09_A 287 ----LKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAH----APLL------ 352 (723)
T ss_dssp ----EEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSSTT----CTTC------
T ss_pred ----EEEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC----CCHH------
T ss_conf ----99999984674399999999997534698389999999999999999999999999998568----8699------
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEE
Q ss_conf 64359999866589999999999702120034888999999999998301126446679865213443011012505999
Q 001836 340 DVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTIL 419 (1008)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~e~Lg~v~~i~ 419 (1008)
..+..++.+++.+|||+|+++++++...+..++ +++++++|+++.+|.||++++||
T Consensus 353 --------------~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~----------a~~gilvk~~~~lE~lg~v~~i~ 408 (723)
T 3j09_A 353 --------------FAFTTLIAVLVVACPCAFGLATPTALTVGMGKG----------AELGILIKNADALEVAEKVTAVI 408 (723)
T ss_dssp --------------CSHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HTTTCEESSTTHHHHGGGCCEEE
T ss_pred --------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHCCEEEECHHHHHHHHCCCEEE
T ss_conf --------------999999999975026789999999999999999----------98893894828998762498999
Q ss_pred ECCCCCEEEECEEEEEEEECCEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCC
Q ss_conf 75987112200279999993830379970788999986200525554432100147999731010000358998632345
Q 001836 420 SDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRI 499 (1008)
Q Consensus 420 ~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (1008)
||||||||+|+|++.++...+..
T Consensus 409 fDKTGTLT~g~~~v~~~~~~~~~--------------------------------------------------------- 431 (723)
T 3j09_A 409 FDKTGTLTKGKPEVTDLVPLNGD--------------------------------------------------------- 431 (723)
T ss_dssp EEHHHHTSCSCCEEEEEEESSSC---------------------------------------------------------
T ss_pred ECCCCCCCCCCEEEEEEEECCCC---------------------------------------------------------
T ss_conf 84777552696279999807999---------------------------------------------------------
Q ss_pred CCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCEECCCCCCCCCEEEECCCCCHHHHHHHHHHCCCEEEEECCCEEE
Q ss_conf 78765650000668889998478999999983104302023589997378428950999999999889499977398599
Q 001836 500 KGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVF 579 (1008)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~C~~~~~~~~~~~~~~~y~~~sp~e~al~~~a~~~g~~~~~~~~~~~~ 579 (1008)
..+++...+.+.. .++||++.|++++++..|+.+...
T Consensus 432 -----------------------~~~~l~~aa~~e~--------------~s~hP~~~Ai~~~a~~~~~~~~~~------ 468 (723)
T 3j09_A 432 -----------------------ERELLRLAAIAER--------------RSEHPIAEAIVKKALEHGIELGEP------ 468 (723)
T ss_dssp -----------------------HHHHHHHHHHHHT--------------TCCSHHHHHHHHHHHHTTCCCCSC------
T ss_pred -----------------------HHHHHHHHHHHHC--------------CCCCCHHHHHHHHHHHCCCCCCCC------
T ss_conf -----------------------8999999999850--------------499954289999998549985786------
Q ss_pred EEECCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 99428999986227998977307989971689999808992999983660466775202742138999999999983587
Q 001836 580 IRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGL 659 (1008)
Q Consensus 580 i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Gl 659 (1008)
..++ +...+. +.. ..+.+|+++.+.+... ...+.....+++++.+|+
T Consensus 469 -------------~~~~--------~~~g~g-~~~-------~~~~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~g~ 515 (723)
T 3j09_A 469 -------------EKVE--------VIAGEG-VVA-------DGILVGNKRLMEDFGV----AVSNEVELALEKLEREAK 515 (723)
T ss_dssp -------------CCCE--------EETTTE-EEE-------TTEEEECHHHHHHTTC----CCCHHHHHHHHHHHTTTC
T ss_pred -------------CCEE--------EECCCC-EEE-------EEEEECCHHHHHHCCC----CCCHHHHHHHHHHHHCCC
T ss_conf -------------4459--------966981-699-------9999778999975499----860899999999985598
Q ss_pred EEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEE
Q ss_conf 08888997079889999999999987411018999999999974306469764102344688809999999975990999
Q 001836 660 RTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWV 739 (1008)
Q Consensus 660 r~l~~A~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~i~i~D~lr~~~~~~I~~L~~agIkv~i 739 (1008)
|++++| .|++++|+++++|++|++++++|+.|+++||++||
T Consensus 516 ~~~~va---------------------------------------~~~~~~G~i~i~D~~~~~~~~~i~~l~~~Gi~v~~ 556 (723)
T 3j09_A 516 TAVIVA---------------------------------------RNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGM 556 (723)
T ss_dssp EEEEEE---------------------------------------ETTEEEEEEEEECCSCTTHHHHHHHHHHTTCEEEE
T ss_pred EEEEEE---------------------------------------ECCEEEEEEEECCCCCHHHHHHHHHHHHCCCEEEE
T ss_conf 289997---------------------------------------89999999960687525699999999977997999
Q ss_pred ECCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHH
Q ss_conf 94897766999998857444795389990688303899999999986999999788753201799883699992601458
Q 001836 740 LTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAY 819 (1008)
Q Consensus 740 lTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~ 819 (1008)
+|||+..+|..+|+++|+.
T Consensus 557 ~TGd~~~~a~~ia~~lgi~------------------------------------------------------------- 575 (723)
T 3j09_A 557 ITGDNWRSAEAISRELNLD------------------------------------------------------------- 575 (723)
T ss_dssp ECSSCHHHHHHHHHHHTCS-------------------------------------------------------------
T ss_pred ECCCCHHHHHHHHHHCCCC-------------------------------------------------------------
T ss_conf 9998989999999985993-------------------------------------------------------------
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEECCCCCHHHHHHCC
Q ss_conf 72599999998322028915999908463999999996116990999538968866666247118951674001423066
Q 001836 820 ALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASD 899 (1008)
Q Consensus 820 ~~~~~~~~~f~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~vl~iGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD 899 (1008)
.++++++|++|..+++.+++ . +.|+|+|||.||++||+.||+||+|+ +....++.+||
T Consensus 576 -------------------~~~~~~~P~~K~~~v~~l~~-~-~~v~~vGDg~ND~~al~~A~vgiamg-~g~~~a~~~AD 633 (723)
T 3j09_A 576 -------------------LVIAEVLPHQKSEEVKKLQA-K-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGD 633 (723)
T ss_dssp -------------------EEECSCCTTCHHHHHHHHTT-T-CCEEEEECSSTTHHHHHHSSEEEECC-CCSCCSSCCSS
T ss_pred -------------------EEECCCCHHHHHHHHHHHHC-C-CEEEEEECCHHHHHHHHHCCEEEEEC-CCCHHHHHHCC
T ss_conf -------------------89926899999999999834-9-93999989823099995499879967-87599998699
Q ss_pred EEECCHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 43032544--78999861133889999989999888999999999999
Q 001836 900 FSIAQFRF--LERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTLFYFE 945 (1008)
Q Consensus 900 ~vi~~~~~--l~~lll~~GR~~~~~~~~~i~~~~~~ni~~~~~~~~~~ 945 (1008)
+++.+.++ +..+ +.+||+.++++++.+.|.|++|++.+. ...+.
T Consensus 634 ~vl~~~~~~~i~~~-i~~~r~~~~~i~~nl~~a~~~n~~~i~-~a~~~ 679 (723)
T 3j09_A 634 IVLIRDDLRDVVAA-IQLSRKTMSKIKQNIFWALIYNVILIP-AAAGL 679 (723)
T ss_dssp EECSSCCTTHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHT
T ss_pred EEEECCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
T ss_conf 99967998899999-999999999999999999999999999-99975
No 8
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=1.00 E-value=1 Score=589.88 Aligned_cols=488 Identities=18% Similarity=0.219 Sum_probs=393.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCHHHH------HCCEEEEEECCCEEEEECCCCCCCCCEEEECCCCCCCCEEEEEEECCC
Q ss_conf 67899999869999999842103987------330889996686375305668975829994169713760999732189
Q 001836 109 LAIVVGVSMAKEALEDWRRFMQDKEV------NARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYE 182 (1008)
Q Consensus 109 l~~vi~is~i~~~~~d~~r~k~~~~~------n~~~~~V~~r~g~~~~i~~~~L~vGDII~l~~ge~iPAD~iiL~ss~~ 182 (1008)
..+++++..+.+++|++.++|+.+.+ ...+++|+ |+|++++|++++|+|||||.|++||.||||+++++
T Consensus 99 ~~~i~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~-r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~---- 173 (645)
T 3j08_A 99 SVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVI-RDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVE---- 173 (645)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEE-ETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEE----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE-ECCEEEEEEHHHCCCCCEEEECCCCEEEEEEEEEE----
T ss_conf 9999999999999999999999999999861799979999-99979998899979899999889998866899998----
Q ss_pred CCEEEEECCCCCCCCCCEEEECCCCCCCCCCHHHHCCCCEEEEECCCCCCCCEEEEEEEECCEEEECCCCCEEECCCEEE
Q ss_conf 85399970367787774333045557999965555048169995089999505799999889253049897141360772
Q 001836 183 DGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLR 262 (1008)
Q Consensus 183 ~g~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~ 262 (1008)
|.|+||||+|||||.|+.|.+++.. |+||.+.+|.
T Consensus 174 -G~~~VdeS~LTGES~Pv~K~~g~~v---------------------------~~Gt~~~~g~----------------- 208 (645)
T 3j08_A 174 -GESYVDESMISGEPVPVLKSKGDEV---------------------------FGATINNTGV----------------- 208 (645)
T ss_dssp -CCEEEECHHHHCCSSCEEECTTCEE---------------------------CTTCEECSSC-----------------
T ss_pred -CCEEEECCCCCCCCCCEECCCCCEE---------------------------ECCEEEECCC-----------------
T ss_conf -8689980224699876560899974---------------------------1667982572-----------------
Q ss_pred CCCEEEEEEEEECCCC---CEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCC
Q ss_conf 1885999999843752---0000489999964479999989999999999999999988553001257997421378898
Q 001836 263 NTAHVYGSVIFTGHDS---KVMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKET 339 (1008)
Q Consensus 263 nt~~~~gvVv~tG~~T---k~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~i~~~~i~~i~~~~~~~~~~~~~~~~~~~~~ 339 (1008)
+.+.|++||.+| ++.++...++.+++++++.+++++.+++++.++++++.++.+.++... +|.
T Consensus 209 ----~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~~----~~~------ 274 (645)
T 3j08_A 209 ----LKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAHA----PLL------ 274 (645)
T ss_dssp ----EEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCSC----SCC------
T ss_pred ----EEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC----CHH------
T ss_conf ----999999727745999999999973146985899999999999999999999999999995698----699------
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEE
Q ss_conf 64359999866589999999999702120034888999999999998301126446679865213443011012505999
Q 001836 340 DVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTIL 419 (1008)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~l~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~e~Lg~v~~i~ 419 (1008)
..+..++.+++.+|||+|+++++++...+..++ +++++++|+++.+|.||++++||
T Consensus 275 --------------~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~----------a~~gilvk~~~~lE~lg~v~~i~ 330 (645)
T 3j08_A 275 --------------FAFTTLIAVLVVACPCAFGLATPTALTVGMGKG----------AELGILIKNADALEVAEKVTAVI 330 (645)
T ss_dssp --------------CTTTTTHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HTTCCCCSSTTHHHHGGGCCEEE
T ss_pred --------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHCCEEECCCHHHHHHHCCCEEE
T ss_conf --------------999999999998736689999999999999999----------97793766816999862799999
Q ss_pred ECCCCCEEEECEEEEEEEECCEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCC
Q ss_conf 75987112200279999993830379970788999986200525554432100147999731010000358998632345
Q 001836 420 SDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRI 499 (1008)
Q Consensus 420 ~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (1008)
||||||||+|+|++.++...+..
T Consensus 331 fDKTGTLT~~~~~v~~~~~~~~~--------------------------------------------------------- 353 (645)
T 3j08_A 331 FDKTGTLTKGKPEVTDLVPLNGD--------------------------------------------------------- 353 (645)
T ss_dssp EEGGGTSSSSCCEEEEEEESSSC---------------------------------------------------------
T ss_pred ECCCCCCCCCCEEEEEEEECCCC---------------------------------------------------------
T ss_conf 86866655897079999817999---------------------------------------------------------
Q ss_pred CCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCEECCCCCCCCCEEEECCCCCHHHHHHHHHHCCCEEEEECCCEEE
Q ss_conf 78765650000668889998478999999983104302023589997378428950999999999889499977398599
Q 001836 500 KGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVF 579 (1008)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~C~~~~~~~~~~~~~~~y~~~sp~e~al~~~a~~~g~~~~~~~~~~~~ 579 (1008)
..+++...+.|+. .+.||++.|++++++..|+.+...+
T Consensus 354 -----------------------~~~~l~~aa~~e~--------------~s~hPla~Aiv~~a~~~g~~~~~~~----- 391 (645)
T 3j08_A 354 -----------------------ERELLRLAAIAER--------------RSEHPIAEAIVKKALEHGIELGEPE----- 391 (645)
T ss_dssp -----------------------HHHHHHHHHHHHT--------------TCCSHHHHHHHHHHHHTTCCCCSCC-----
T ss_pred -----------------------HHHHHHHHHHHHH--------------CCCCHHHHHHHHHHHHCCCCCCCCC-----
T ss_conf -----------------------7999999999751--------------5887467999999996599867865-----
Q ss_pred EEECCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 99428999986227998977307989971689999808992999983660466775202742138999999999983587
Q 001836 580 IRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRLSKNGRMYEEATTKLLNEYGEAGL 659 (1008)
Q Consensus 580 i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Gl 659 (1008)
.++ +...+. +.. ..+.+|+++.+.+.. ....+.....+++++.+|+
T Consensus 392 --------------~~~--------~~~g~g-~~~-------~~v~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~g~ 437 (645)
T 3j08_A 392 --------------KVE--------VIAGEG-VVA-------DGILVGNKRLMEDFG----VAVSNEVELALEKLEREAK 437 (645)
T ss_dssp --------------CCE--------EETTTE-EEE-------TTEEEECHHHHHHTT----CCCCHHHHHHHHHHHTTTC
T ss_pred --------------CEE--------EECCCC-EEE-------EEEEECCHHHHHHCC----CCCCHHHHHHHHHHHHCCC
T ss_conf --------------359--------965884-699-------999988799997549----8751889999999985598
Q ss_pred EEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEE
Q ss_conf 08888997079889999999999987411018999999999974306469764102344688809999999975990999
Q 001836 660 RTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWV 739 (1008)
Q Consensus 660 r~l~~A~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~i~i~D~lr~~~~~~I~~L~~agIkv~i 739 (1008)
|++++| .|++++|+++++|++|++++++|+.|+++|+++||
T Consensus 438 ~~l~va---------------------------------------~~~~~~G~i~~~D~l~~~~~~~i~~L~~~Gi~v~~ 478 (645)
T 3j08_A 438 TAVIVA---------------------------------------RNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGM 478 (645)
T ss_dssp CCEEEE---------------------------------------ETTEEEEEEEEECCCTTTHHHHHHHHHHTTCEEEE
T ss_pred EEEEEE---------------------------------------ECCEEEEEEEECCCCHHHHHHHHHHHHHCCCEEEE
T ss_conf 389998---------------------------------------89999999993487656799999999977997999
Q ss_pred ECCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHH
Q ss_conf 94897766999998857444795389990688303899999999986999999788753201799883699992601458
Q 001836 740 LTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQMIKLERDPHAAYALIIEGKTLAY 819 (1008)
Q Consensus 740 lTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~ 819 (1008)
+|||+..+|..+++++|+.
T Consensus 479 ~TGd~~~~a~~ia~~lgi~------------------------------------------------------------- 497 (645)
T 3j08_A 479 ITGDNWRSAEAISRELNLD------------------------------------------------------------- 497 (645)
T ss_dssp ECSSCHHHHHHHHHHHTCS-------------------------------------------------------------
T ss_pred EECCCHHHHHHHHHHCCCC-------------------------------------------------------------
T ss_conf 9088879999999983997-------------------------------------------------------------
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEECCCCCHHHHHHCC
Q ss_conf 72599999998322028915999908463999999996116990999538968866666247118951674001423066
Q 001836 820 ALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASD 899 (1008)
Q Consensus 820 ~~~~~~~~~f~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~vl~iGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD 899 (1008)
.++++++|++|..+++.+++ . +.|+|+|||.||++|++.||+||+|+ +....++.+||
T Consensus 498 -------------------~~~~~~~P~~K~~~v~~l~~-~-~~v~~vGDg~ND~~al~~A~vgiamg-~g~~~a~~~AD 555 (645)
T 3j08_A 498 -------------------LVIAEVLPHQKSEEVKKLQA-K-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGD 555 (645)
T ss_dssp -------------------EEECSCCTTCHHHHHHHHTT-T-CCEEEEECSSSCHHHHHHSSEEEEEC-CCSCCSSCCSS
T ss_pred -------------------EEEEECCHHHHHHHHHHHHH-C-CEEEEEECCHHHHHHHHHCCEEEEEC-CCCHHHHHHCC
T ss_conf -------------------89983787768999999860-9-95999969776899997599889948-87599998699
Q ss_pred EEECCHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 43032544--789998611338899999899998889999999
Q 001836 900 FSIAQFRF--LERLLVVHGHWCYKRIAQMICYFFYKNIAFGLT 940 (1008)
Q Consensus 900 ~vi~~~~~--l~~lll~~GR~~~~~~~~~i~~~~~~ni~~~~~ 940 (1008)
+++.+.++ +..+ +.+||+.++++++.+.|.+++|++.+..
T Consensus 556 ~vl~~~~~~~i~~~-i~~~r~~~~~i~~nl~~a~~~N~~~i~l 597 (645)
T 3j08_A 556 IVLIRDDLRDVVAA-IQLSRKTMSKIKQNIFWALIYNVILIPA 597 (645)
T ss_dssp SEESSCCTTHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99936998899999-9999999999999999999999999999
No 9
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=1.00 E-value=1 Score=209.68 Aligned_cols=138 Identities=21% Similarity=0.318 Sum_probs=114.0
Q ss_pred CCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHH
Q ss_conf 06469764102344688809999999975990999948977669999988574447953899906883038999999999
Q 001836 705 KDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVK 784 (1008)
Q Consensus 705 ~~l~~lG~i~i~D~lr~~~~~~I~~L~~agIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~ 784 (1008)
.+-.+.|.+.+.|+++|+++++|+.|++.|++++|+|||+..++..++..+|+..
T Consensus 123 ~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~------------------------- 177 (263)
T 2yj3_A 123 INGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE------------------------- 177 (263)
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHCCCEE
Q ss_conf 86999999788753201799883699992601458725999999983220289159999084639999999961169909
Q 001836 785 DNILMQITNASQMIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTT 864 (1008)
Q Consensus 785 ~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~f~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~v 864 (1008)
+|..+.|..|..+++.++. .+..+
T Consensus 178 -------------------------------------------------------~f~~~~p~~k~~~~~~l~~-~~~~~ 201 (263)
T 2yj3_A 178 -------------------------------------------------------YYSNLSPEDKVRIIEKLKQ-NGNKV 201 (263)
Q ss_pred EEECCCCCCHHHHHHCCEEEEECCCCCHHHHHHCCEEE--CCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99538968866666247118951674001423066430--32544789998611338899999
Q 001836 865 LAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFSI--AQFRFLERLLVVHGHWCYKRIAQ 925 (1008)
Q Consensus 865 l~iGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~vi--~~~~~l~~lll~~GR~~~~~~~~ 925 (1008)
+|||||.||++|++.|++||++. .....+...+|+++ .++..+..+ +..+|..+++++.
T Consensus 202 ~~VGD~~~D~~aa~~Agv~va~g-~~~~~~~~~ad~v~~~~~l~~l~~~-l~~~r~~~~~i~~ 262 (263)
T 2yj3_A 202 LMIGDGVNDAAALALADVSVAMG-NGVDISKNVADIILVSNDIGTLLGL-IKNRKRLSNAIPS 262 (263)
No 10
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=1.00 E-value=1 Score=178.97 Aligned_cols=272 Identities=21% Similarity=0.268 Sum_probs=194.5
Q ss_pred CCCCCCCCCCCCHHHCCCEEEEEECCCCCEEEECEEEEEEEECCEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCC
Q ss_conf 79865213443011012505999759871122002799999938303799707889999862005255544321001479
Q 001836 397 SGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKN 476 (1008)
Q Consensus 397 ~~~~~~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (1008)
.++|+++|+++.+|.+++++.|+||||||||.+.+.+..+...+. ++
T Consensus 14 ~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~------~~--------------------------- 60 (287)
T 3a1c_A 14 AELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG------DE--------------------------- 60 (287)
T ss_dssp CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS------CH---------------------------
T ss_pred HHCCEEEECCHHHHHHHCCCEEEEECCCCCCCCCEEEEEEEECCC------CH---------------------------
T ss_conf 879979968089988536999999689988289779999981799------99---------------------------
Q ss_pred CCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCEECCCCCCCCCEEEECCCCCH
Q ss_conf 99731010000358998632345787656500006688899984789999999831043020235899973784289509
Q 001836 477 SGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDE 556 (1008)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~C~~~~~~~~~~~~~~~y~~~sp~e 556 (1008)
.+++..++ .+ + ..+.||.+
T Consensus 61 -----------------------------------------------~~~l~~~~---~~--e---------~~s~hp~~ 79 (287)
T 3a1c_A 61 -----------------------------------------------RELLRLAA---IA--E---------RRSEHPIA 79 (287)
T ss_dssp -----------------------------------------------HHHHHHHH---HH--T---------TTCCSHHH
T ss_pred -----------------------------------------------HHHHHHHH---HH--H---------HCCCCHHH
T ss_conf -----------------------------------------------99999999---97--5---------21799799
Q ss_pred HHHHHHHHHCCCEEEEECCCEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCEEEEECCCHHHHHHHH
Q ss_conf 99999999889499977398599994289999862279989773079899716899998089929999836604667752
Q 001836 557 AAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADSIIFDRL 636 (1008)
Q Consensus 557 ~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~ 636 (1008)
.|+.++++..|+..... ..+..+ . ...+ +. . .+.+|.++.+....
T Consensus 80 ~a~~~~~~~~g~~~~~~-------------------~~~~~~--~-----G~~~----~~--~---~~~~g~~~~~~~~~ 124 (287)
T 3a1c_A 80 EAIVKKALEHGIELGEP-------------------EKVEVI--A-----GEGV----VA--D---GILVGNKRLMEDFG 124 (287)
T ss_dssp HHHHHHHHHTTCCCCCC-------------------SCEEEE--T-----TTEE----EE--T---TEEEECHHHHHHTT
T ss_pred HHHHHHHHHCCCCCCCC-------------------CCCEEE--C-----CCCE----EE--E---EEEECCHHHHHHCC
T ss_conf 99999998659985555-------------------441462--4-----8872----88--9---99988999998659
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 02742138999999999983587088889970798899999999999874110189999999999743064697641023
Q 001836 637 SKNGRMYEEATTKLLNEYGEAGLRTLALAYKQLDESEYSAWNSEFQKAKSSIGADREATLEHVSDMMEKDLILVGATAVE 716 (1008)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~Glr~l~~A~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~i~i~ 716 (1008)
. ..........+.+..+|.+++.+++ +..+++.+..+
T Consensus 125 ~----~~~~~~~~~~~~~~~~g~~~i~~~~---------------------------------------d~~~~~~~~~~ 161 (287)
T 3a1c_A 125 V----AVSNEVELALEKLEREAKTAVIVAR---------------------------------------NGRVEGIIAVS 161 (287)
T ss_dssp C----CCCHHHHHHHHHHHHTTCEEEEEEE---------------------------------------TTEEEEEEEEE
T ss_pred C----CCCHHHHHHHHHHHHCCCEEEEEEE---------------------------------------CCEEEEEEEEC
T ss_conf 9----7507789999998747975999999---------------------------------------99899999954
Q ss_pred CCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 44688809999999975990999948977669999988574447953899906883038999999999869999997887
Q 001836 717 DKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITALNSDSVGKAAKEAVKDNILMQITNASQ 796 (1008)
Q Consensus 717 D~lr~~~~~~I~~L~~agIkv~ilTGD~~~ta~~ia~~~gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (1008)
++++|++.++++.|+++|+++.++||+....+..++..+|+..
T Consensus 162 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~------------------------------------- 204 (287)
T 3a1c_A 162 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL------------------------------------- 204 (287)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE-------------------------------------
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCE-------------------------------------
T ss_conf 5361418999999997798599990989899999999809813-------------------------------------
Q ss_pred HHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHCCCEEEEECCCCCCHHH
Q ss_conf 53201799883699992601458725999999983220289159999084639999999961169909995389688666
Q 001836 797 MIKLERDPHAAYALIIEGKTLAYALEDDMKHHFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGM 876 (1008)
Q Consensus 797 ~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~f~~~~~~~~~~i~~r~~p~qK~~iv~~lk~~~~~~vl~iGDG~ND~~m 876 (1008)
.|..+.|..|...++.+.. . ..+++|||+.||+.|
T Consensus 205 -------------------------------------------~f~~i~~~~K~~~~~~l~~-~-~~~~~vGDs~~Di~~ 239 (287)
T 3a1c_A 205 -------------------------------------------VIAEVLPHQKSEEVKKLQA-K-EVVAFVGDGINDAPA 239 (287)
T ss_dssp -------------------------------------------EECSCCTTCHHHHHHHHTT-T-CCEEEEECTTTCHHH
T ss_pred -------------------------------------------EEEECCHHHHHHHHHHHHC-C-CEEEEEECCHHHHHH
T ss_conf -------------------------------------------1100581779999999825-8-839999797778999
Q ss_pred HHHCCEEEEECCCCCHHHHHHCCEEE--CCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 66247118951674001423066430--3254478999861133889999
Q 001836 877 IQEADIGIGISGVEGMQAVMASDFSI--AQFRFLERLLVVHGHWCYKRIA 924 (1008)
Q Consensus 877 l~~AdvGI~i~g~~~~~a~~~aD~vi--~~~~~l~~lll~~GR~~~~~~~ 924 (1008)
.+.|+++|++.. ........+|+++ .++..+..+ +..+|..+++++
T Consensus 240 a~~ag~~v~~~~-~~~~~~~~ad~v~~~~~~~~l~~~-l~~~~~~~~~i~ 287 (287)
T 3a1c_A 240 LAQADLGIAVGS-GSDVAVESGDIVLIRDDLRDVVAA-IQLSRKTMSKIK 287 (287)
T ss_dssp HHHSSEEEEECC-CSCCSSCCSSEEESSSCTHHHHHH-HHTTC-------
T ss_pred HHHCCEEEEECC-CCHHHHHHCCEEEECCCHHHHHHH-HHHHHHHHHHHC
T ss_conf 997895299678-877889629999947998999999-999999998509
Done!