BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001837
(1007 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial
P-Type Atpase Copper Transporter Copa
pdb|3J09|B Chain B, High Resolution Helical Reconstruction Of The Bacterial
P-Type Atpase Copper Transporter Copa
Length = 723
Score = 269 bits (687), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 217/728 (29%), Positives = 353/728 (48%), Gaps = 72/728 (9%)
Query: 16 VLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARF-- 73
V G+ C+ V IE + SLEGV+EV V + + T + D I I + + +
Sbjct: 8 VTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIEDLGYGV 67
Query: 74 ---EANVRAYGGTSYQKKWPSPYAMACGVLLAISILKYVYHPLRWFALGAVAI-GIF--- 126
+A V A + K A GVLL + + ++ P F +A+ IF
Sbjct: 68 VDEQAAVSAEVEHLSRMKRKLYVAAFAGVLL-LFLAHFISLPYEDFVQLLIALPAIFYSG 126
Query: 127 -PIILKGLAAIRNFKLDINILVLIAVIGTIAMNDYIEAGIIVFLFTIAEW---------- 175
I +A+R L+++++ + V + AG++ ++ E
Sbjct: 127 SSIFKAAFSALRRRTLNMDVMYSMGVGAAFLASVLSTAGVLPREYSFYETSVLLLAFLLL 186
Query: 176 ---LESRASHKATAVMSSLMSIAPQKAIIAGTGEE--VDAGEVKLNTVLAVKAGEVIPID 230
LE+RA + + L+ + + A++ G+E V EV + ++ V+ GE IP+D
Sbjct: 187 GRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVD 246
Query: 231 GIVVDGKCEVDEKTLTGESYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKL 290
G+VV+G+ VDE ++GE PV K KG V+ TIN G + + T V + ++A++ KL
Sbjct: 247 GVVVEGESYVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKL 306
Query: 291 VEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLA-------- 342
VE+A SK IQR DK Y+ P V+ ++ +S W+ +A
Sbjct: 307 VEDAMGSKPPIQRLADKVVAYFIPTVLLVA-----------ISAFIYWYFIAHAPLLFAF 355
Query: 343 ---LVVLVSACPCALILSTPVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTI 399
+ VLV ACPCA L+TP + K A G+LIK D L+ KV + FDKTGT+
Sbjct: 356 TTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTL 415
Query: 400 TRGEFVMSEFQPLSEDINLNTLLYWVSSIESKSSHPMSAALVEYGRSLSIE-PKPEDVED 458
T+G+ +++ PL+ D LL + E +S HP++ A+V+ IE +PE VE
Sbjct: 416 TKGKPEVTDLVPLNGD--ERELLRLAAIAERRSEHPIAEAIVKKALEHGIELGEPEKVE- 472
Query: 459 YQNFPXXXXXXXXXXXXXXXXNRKIAQRAGCGTVPSV----DGPKMKGNTIGYIFSGASP 514
N+++ + G V + + + T +
Sbjct: 473 ------VIAGEGVVADGILVGNKRLMEDFGVAVSNEVELALEKLEREAKTAVIVARNGRV 526
Query: 515 VGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSELLPE 574
GI +SD + A AV +LK +GI+ M+TGDN +A +L L++V +E+LP
Sbjct: 527 EGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELN--LDLVIAEVLPH 584
Query: 575 DKAKIINQFKQEGKTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRK 634
K++ + + + + A +GDGINDAPALA AD+GI++G SGS +A E+G ++L+ +D+R
Sbjct: 585 QKSEEVKKLQAKEVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRD 643
Query: 635 VPEAIRLARKAHWKVIENIAVSIATKAGIIALALGGHPLVWAAV-------LADVGTCLI 687
V AI+L+RK K+ +NI ++ +I A G ++ V LA + +
Sbjct: 644 VVAAIQLSRKTMSKIKQNIFWALIYNVILIPAAAGLLYPIFGVVFRPEFAGLAMAMSSVS 703
Query: 688 VILNSMLL 695
V+ NS+LL
Sbjct: 704 VVANSLLL 711
>pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial
P-Type Atpase Copper Transporter Copa
pdb|3J08|B Chain B, High Resolution Helical Reconstruction Of The Bacterial
P-Type Atpase Copper Transporter Copa
Length = 645
Score = 260 bits (664), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 178/545 (32%), Positives = 281/545 (51%), Gaps = 48/545 (8%)
Query: 176 LESRASHKATAVMSSLMSIAPQKAIIAGTGEE--VDAGEVKLNTVLAVKAGEVIPIDGIV 233
LE+RA + + L+ + + A++ G+E V EV + ++ V+ GE IP+DG+V
Sbjct: 112 LEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVV 171
Query: 234 VDGKCEVDEKTLTGESYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEE 293
V+G+ VDE ++GE PV K KG V+ TIN G + + T V + ++A++ KLVE+
Sbjct: 172 VEGESYVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVED 231
Query: 294 AQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLA----------- 342
A SK IQR DK Y+ P V+ ++ +S W+ +A
Sbjct: 232 AMGSKPPIQRLADKVVAYFIPTVLLVA-----------ISAFIYWYFIAHAPLLFAFTTL 280
Query: 343 LVVLVSACPCALILSTPVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRG 402
+ VLV ACPCA L+TP + K A G+LIK D L+ KV + FDKTGT+T+G
Sbjct: 281 IAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKG 340
Query: 403 EFVMSEFQPLSEDINLNTLLYWVSSIESKSSHPMSAALVEYGRSLSIE-PKPEDVEDYQN 461
+ +++ PL+ D LL + E +S HP++ A+V+ IE +PE VE
Sbjct: 341 KPEVTDLVPLNGD--ERELLRLAAIAERRSEHPIAEAIVKKALEHGIELGEPEKVE---- 394
Query: 462 FPXXXXXXXXXXXXXXXXNRKIAQRAGCGTVPSVDGPKMK----GNTIGYIFSGASPVGI 517
N+++ + G V+ K T + GI
Sbjct: 395 ---VIAGEGVVADGILVGNKRLMEDFGVAVSNEVELALEKLEREAKTAVIVARNGRVEGI 451
Query: 518 FCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSELLPEDKA 577
+SD + A AV +LK +GI+ M+TGDN +A +L L++V +E+LP K+
Sbjct: 452 IAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELN--LDLVIAEVLPHQKS 509
Query: 578 KIINQFKQEGKTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPE 637
+ + + + + A +GDGINDAPALA AD+GI++G SGS +A E+G ++L+ +D+R V
Sbjct: 510 EEVKKLQAKEVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVA 568
Query: 638 AIRLARKAHWKVIENIAVSIATKAGIIALALGGHPLVWAAV-------LADVGTCLIVIL 690
AI+L+RK K+ +NI ++ +I A G ++ V LA + + V+
Sbjct: 569 AIQLSRKTMSKIKQNIFWALIYNVILIPAAAGLLYPIFGVVFRPEFAGLAMAMSSVSVVA 628
Query: 691 NSMLL 695
NS+LL
Sbjct: 629 NSLLL 633
>pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase
pdb|3RFU|B Chain B, Crystal Structure Of A Copper-Transporting Pib-Type Atpase
pdb|3RFU|C Chain C, Crystal Structure Of A Copper-Transporting Pib-Type Atpase
pdb|3RFU|D Chain D, Crystal Structure Of A Copper-Transporting Pib-Type Atpase
Length = 736
Score = 243 bits (620), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 173/558 (31%), Positives = 291/558 (52%), Gaps = 35/558 (6%)
Query: 160 YIEAG-IIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAIIA---GTGEEVDAGEVKL 215
Y EA +I L + + LE +A + + + +L+ + P+ A G+ EEV V +
Sbjct: 187 YFEAAAVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAV 246
Query: 216 NTVLAVKAGEVIPIDGIVVDGKCEVDEKTLTGESYPVSKQKGSTVWAGTINLNGYISVET 275
+L V+ GE IP+DG V +G+ VDE +TGE PV+K+ + V TIN G ++
Sbjct: 247 GDLLRVRPGEKIPVDGEVQEGRSFVDESMVTGEPIPVAKEASAKVIGATINQTGSFVMKA 306
Query: 276 TAVAEDCVVAKMAKLVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNH 335
V D ++A++ ++V +AQ S++ IQR D S ++ PAVI ++ ++ LG
Sbjct: 307 LHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSFIVWALLGPQPA 366
Query: 336 KQWFHLALV-VLVSACPCALILSTPVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFD 394
+ +A V VL+ ACPCAL L+TP+ + K A SG+LIK + L+ + KV + D
Sbjct: 367 LSYGLIAAVSVLIIACPCALGLATPMSIMVGVGKGAQSGVLIKNAEALERMEKVNTLVVD 426
Query: 395 KTGTITRGEFVMSEFQPLSEDINLNTLLYWVSSIESKSSHPMSAALV----EYGRSLSIE 450
KTGT+T G ++ +++D + L +++E +S HP++ A+V E G SL
Sbjct: 427 KTGTLTEGHPKLTRI--VTDDFVEDNALALAAALEHQSEHPLANAIVHAAKEKGLSLG-- 482
Query: 451 PKPEDVEDYQNFPXXXXXXXXXXXXXXXXNRKIAQRAGCGTVP---SVDGPKMKGNTIGY 507
VE ++ N ++ Q G P D + KG ++ +
Sbjct: 483 ----SVEAFEAPTGKGVVGQVDGHHVAIGNARLMQEHGGDNAPLFEKADELRGKGASVMF 538
Query: 508 IFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVV 567
+ V + + D ++ E + +L+ GI MLTGD++ A LG + V
Sbjct: 539 MAVDGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLG--IKKV 596
Query: 568 HSELLPEDKAKIINQFKQEGK-TAMIGDGINDAPALATADIGISMGISGSALATETGQVI 626
+E++PEDK++I+++ K +G AM GDG+NDAPALA ADIGI+MG +G+ +A E+ V
Sbjct: 597 VAEIMPEDKSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIAMG-TGTDVAIESAGVT 655
Query: 627 LMSNDIRKVPEAIRLARKAHWKVIENI-------AVSIATKAGIIALALG--GHPLVWAA 677
L+ D+R + +A RL+ + +N+ + + AG++ G P++ AA
Sbjct: 656 LLHGDLRGIAKARRLSESTMSNIRQNLFFAFIYNVLGVPLAAGVLYPLTGLLLSPMIAAA 715
Query: 678 VLADVGTCLIVILNSMLL 695
+A + + VI+N++ L
Sbjct: 716 AMAL--SSVSVIINALRL 731
>pdb|3SKY|A Chain A, 2.1a Crystal Structure Of The Phosphate Bound Atp Binding
Domain Of Archaeoglobus Fulgidus Copb
Length = 274
Score = 155 bits (393), Expect = 8e-38, Method: Composition-based stats.
Identities = 93/261 (35%), Positives = 150/261 (57%), Gaps = 15/261 (5%)
Query: 393 FDKTGTITRGEFVMSEFQPL--SEDINLNTLLYWVSSIESKSSHPMSAALVEYG--RSLS 448
FDKTGT+T G F +++ SED LL +S+E++S HP++AA+VE R
Sbjct: 18 FDKTGTLTEGRFGVTDIVGFNHSED----ELLQIAASLEARSEHPIAAAIVEEAEKRGFG 73
Query: 449 IEPKPEDVEDYQNFPXXXXXXXXXXXXXXXXNRKIAQRAGCGTVPSVDGPKMKGNTIGYI 508
+ +VE+++ P + + G T SV+ K +G T+ +I
Sbjct: 74 LT----EVEEFRAIPGKGVEGIVNGRRYMVVSPGYIRELGIKTDESVEKLKQQGKTVVFI 129
Query: 509 FSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVH 568
G+ L+D R + EA+++LK++GI+ MLTGDN+ A E+LG L+
Sbjct: 130 LKNGEVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELG--LDDYF 187
Query: 569 SELLPEDKAKIINQFKQEGKTAMIGDGINDAPALATADIGISMGISGSALATETGQVILM 628
+E+LP +KA+ + + +Q+ TAM+GDG+NDAPALA AD+GI++G +G+ +A ET ++L+
Sbjct: 188 AEVLPHEKAEKVKEVQQKYVTAMVGDGVNDAPALAQADVGIAIG-AGTDVAVETADIVLV 246
Query: 629 SNDIRKVPEAIRLARKAHWKV 649
ND R V + L+RK + K+
Sbjct: 247 RNDPRDVAAIVELSRKTYSKL 267
>pdb|3SKX|A Chain A, Crystal Structure Of The Atp Binding Domain Of
Archaeoglobus Fulgidus Copb
Length = 280
Score = 155 bits (391), Expect = 1e-37, Method: Composition-based stats.
Identities = 93/260 (35%), Positives = 149/260 (57%), Gaps = 15/260 (5%)
Query: 393 FDKTGTITRGEFVMSEFQPL--SEDINLNTLLYWVSSIESKSSHPMSAALVEYG--RSLS 448
FDKTGT+T G F +++ SED LL +S+E++S HP++AA+VE R
Sbjct: 18 FDKTGTLTEGRFGVTDIVGFNHSED----ELLQIAASLEARSEHPIAAAIVEEAEKRGFG 73
Query: 449 IEPKPEDVEDYQNFPXXXXXXXXXXXXXXXXNRKIAQRAGCGTVPSVDGPKMKGNTIGYI 508
+ +VE+++ P + + G T SV+ K +G T+ +I
Sbjct: 74 LT----EVEEFRAIPGKGVEGIVNGRRYMVVSPGYIRELGIKTDESVEKLKQQGKTVVFI 129
Query: 509 FSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVH 568
G+ L+D R + EA+++LK++GI+ MLTGDN+ A E+LG L+
Sbjct: 130 LKNGEVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELG--LDDYF 187
Query: 569 SELLPEDKAKIINQFKQEGKTAMIGDGINDAPALATADIGISMGISGSALATETGQVILM 628
+E+LP +KA+ + + +Q+ TAM+GDG+NDAPALA AD+GI++G +G+ +A ET ++L+
Sbjct: 188 AEVLPHEKAEKVKEVQQKYVTAMVGDGVNDAPALAQADVGIAIG-AGTDVAVETADIVLV 246
Query: 629 SNDIRKVPEAIRLARKAHWK 648
ND R V + L+RK + K
Sbjct: 247 RNDPRDVAAIVELSRKTYSK 266
>pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A
Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg
pdb|3A1C|B Chain B, Crystal Structure Of The P- And N-Domains Of Copa, A
Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg
pdb|3A1D|A Chain A, Crystal Structure Of The P- And N-domains Of Copa, A
Copper- Transporting P-type Atpase, Bound With Adp-mg
pdb|3A1D|B Chain B, Crystal Structure Of The P- And N-domains Of Copa, A
Copper- Transporting P-type Atpase, Bound With Adp-mg
Length = 287
Score = 144 bits (363), Expect = 3e-34, Method: Composition-based stats.
Identities = 96/287 (33%), Positives = 153/287 (53%), Gaps = 17/287 (5%)
Query: 368 KAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDINLNTLLYWVSS 427
K A G+LIK D L+ KV + FDKTGT+T+G+ +++ PL+ D LL +
Sbjct: 12 KGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGD--ERELLRLAAI 69
Query: 428 IESKSSHPMSAALVEYGRSLSIE-PKPEDVEDYQNFPXXXXXXXXXXXXXXXXNRKIAQR 486
E +S HP++ A+V+ IE +PE VE N+++ +
Sbjct: 70 AERRSEHPIAEAIVKKALEHGIELGEPEKVE-------VIAGEGVVADGILVGNKRLMED 122
Query: 487 AGCGTVPSVD----GPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRT 542
G V+ + + T + GI +SD + A AV +LK +GI+
Sbjct: 123 FGVAVSNEVELALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKV 182
Query: 543 AMLTGDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEGKTAMIGDGINDAPAL 602
M+TGDN +A +L L++V +E+LP K++ + + + + A +GDGINDAPAL
Sbjct: 183 GMITGDNWRSAEAISRELN--LDLVIAEVLPHQKSEEVKKLQAKEVVAFVGDGINDAPAL 240
Query: 603 ATADIGISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKV 649
A AD+GI++G SGS +A E+G ++L+ +D+R V AI+L+RK K+
Sbjct: 241 AQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKI 286
>pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln
Mutant Copa, A Copper-Transporting P-Type Atpase, Bound
With Amppcp-Mg
pdb|3A1E|B Chain B, Crystal Structure Of The P- And N-Domains Of His462gln
Mutant Copa, A Copper-Transporting P-Type Atpase, Bound
With Amppcp-Mg
Length = 287
Score = 141 bits (356), Expect = 2e-33, Method: Composition-based stats.
Identities = 95/287 (33%), Positives = 152/287 (52%), Gaps = 17/287 (5%)
Query: 368 KAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDINLNTLLYWVSS 427
K A G+LIK D L+ KV + FDKTGT+T+G+ +++ PL+ D LL +
Sbjct: 12 KGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGD--ERELLRLAAI 69
Query: 428 IESKSSHPMSAALVEYGRSLSIE-PKPEDVEDYQNFPXXXXXXXXXXXXXXXXNRKIAQR 486
E +S P++ A+V+ IE +PE VE N+++ +
Sbjct: 70 AERRSEQPIAEAIVKKALEHGIELGEPEKVE-------VIAGEGVVADGILVGNKRLMED 122
Query: 487 AGCGTVPSVD----GPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRT 542
G V+ + + T + GI +SD + A AV +LK +GI+
Sbjct: 123 FGVAVSNEVELALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKV 182
Query: 543 AMLTGDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEGKTAMIGDGINDAPAL 602
M+TGDN +A +L L++V +E+LP K++ + + + + A +GDGINDAPAL
Sbjct: 183 GMITGDNWRSAEAISRELN--LDLVIAEVLPHQKSEEVKKLQAKEVVAFVGDGINDAPAL 240
Query: 603 ATADIGISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKV 649
A AD+GI++G SGS +A E+G ++L+ +D+R V AI+L+RK K+
Sbjct: 241 AQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKI 286
>pdb|2KKH|A Chain A, Structure Of The Zinc Binding Domain Of The Atpase Hma4
Length = 95
Score = 133 bits (335), Expect = 5e-31, Method: Composition-based stats.
Identities = 63/80 (78%), Positives = 71/80 (88%)
Query: 10 QKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALN 69
QKSYFDVLGICC+SEVP+IENILKSL+GVKE SVIVPSRTVIV+HD+LLIS QI KALN
Sbjct: 16 QKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQIAKALN 75
Query: 70 QARFEANVRAYGGTSYQKKW 89
+AR EANVR G TS++ KW
Sbjct: 76 EARLEANVRVNGETSFKNKW 95
>pdb|2B8E|A Chain A, Copa Atp Binding Domain
pdb|2B8E|B Chain B, Copa Atp Binding Domain
pdb|2B8E|C Chain C, Copa Atp Binding Domain
Length = 273
Score = 130 bits (326), Expect = 4e-30, Method: Composition-based stats.
Identities = 90/277 (32%), Positives = 144/277 (51%), Gaps = 17/277 (6%)
Query: 377 KGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDINLNTLLYWVSSIESKSSHPM 436
K D L+ KV + FDKTGT+T+G+ +++ PL+ D LL + E +S HP+
Sbjct: 1 KNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGD--ERELLRLAAIAERRSEHPI 58
Query: 437 SAALVEYGRSLSIE-PKPEDVEDYQNFPXXXXXXXXXXXXXXXXNRKIAQRAGCGTVPSV 495
+ A+V+ IE +PE VE N+++ + G V
Sbjct: 59 AEAIVKKALEHGIELGEPEKVE-------VIAGEGVVADGILVGNKRLXEDFGVAVSNEV 111
Query: 496 D----GPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQS 551
+ + + T + GI +SD + A AV +LK GI+ +TGDN
Sbjct: 112 ELALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRXGIKVGXITGDNWR 171
Query: 552 AAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEGKTAMIGDGINDAPALATADIGISM 611
+A +L L++V +E+LP K++ + + + + A +GDGINDAPALA AD+GI++
Sbjct: 172 SAEAISRELN--LDLVIAEVLPHQKSEEVKKLQAKEVVAFVGDGINDAPALAQADLGIAV 229
Query: 612 GISGSALATETGQVILMSNDIRKVPEAIRLARKAHWK 648
G SGS +A E+G ++L+ +D+R V AI+L+RK K
Sbjct: 230 G-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTXSK 265
>pdb|2IYE|A Chain A, Structure Of Catalytic Cpx-atpase Domain Copb-b
pdb|2IYE|C Chain C, Structure Of Catalytic Cpx-atpase Domain Copb-b
Length = 263
Score = 103 bits (256), Expect = 6e-22, Method: Composition-based stats.
Identities = 77/266 (28%), Positives = 139/266 (52%), Gaps = 31/266 (11%)
Query: 368 KAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDINLNTLLYWVSS 427
K G++IK + + + ++ + FDKTGT+T G ++++F I + L + +S
Sbjct: 8 KMLHKGMIIKNSNVYEKIKEIDTIIFDKTGTLTYGTPIVTQF------IGDSLSLAYAAS 61
Query: 428 IESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFPXXXXXXXXXXXXXXXXNRKIAQRA 487
+E+ SSHP++ A+V+Y + + K +V+D++ KI+ +
Sbjct: 62 VEALSSHPIAKAIVKYAKEQGV--KILEVKDFKEI------------SGIGVRGKISDKI 107
Query: 488 GCGTVPSVDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTG 547
++ K + N ++ P+ F +SD R + + +LK+ G++ +L+G
Sbjct: 108 -------IEVKKAENNNDIAVYINGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSG 160
Query: 548 DNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEG-KTAMIGDGINDAPALATAD 606
D + + ++L + +S L PEDK +II + KQ G K MIGDG+NDA ALA AD
Sbjct: 161 DKEDKVKELSKELN--IQEYYSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALALAD 218
Query: 607 IGISMGISGSALATETGQVILMSNDI 632
+ ++MG +G ++ +IL+SNDI
Sbjct: 219 VSVAMG-NGVDISKNVADIILVSNDI 243
>pdb|2YJ3|A Chain A, Conformational Changes In The Catalytic Domain Of The Cpx-
Atpase Copb-B Upon Nucleotide Binding
Length = 263
Score = 101 bits (251), Expect = 2e-21, Method: Composition-based stats.
Identities = 76/266 (28%), Positives = 139/266 (52%), Gaps = 31/266 (11%)
Query: 368 KAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDINLNTLLYWVSS 427
K G++IK + + + ++ + F+KTGT+T G ++++F I + L + +S
Sbjct: 8 KMLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQF------IGDSLSLAYAAS 61
Query: 428 IESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFPXXXXXXXXXXXXXXXXNRKIAQRA 487
+E+ SSHP++ A+V+Y + + K +V+D++ KI+ +
Sbjct: 62 VEALSSHPIAKAIVKYAKEQGV--KILEVKDFKEI------------SGIGVRGKISDKI 107
Query: 488 GCGTVPSVDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTG 547
++ K + N ++ P+ F +SD R + + +LK+ G++ +L+G
Sbjct: 108 -------IEVKKAENNNDIAVYINGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSG 160
Query: 548 DNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEG-KTAMIGDGINDAPALATAD 606
D + + ++L + +S L PEDK +II + KQ G K MIGDG+NDA ALA AD
Sbjct: 161 DKEDKVKELSKELN--IQEYYSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALALAD 218
Query: 607 IGISMGISGSALATETGQVILMSNDI 632
+ ++MG +G ++ +IL+SNDI
Sbjct: 219 VSVAMG-NGVDISKNVADIILVSNDI 243
>pdb|2YJ4|A Chain A, Conformational Changes In The Catalytic Domain Of The Cpx-
Atpase Copb-B Upon Nucleotide Binding
pdb|2YJ4|B Chain B, Conformational Changes In The Catalytic Domain Of The Cpx-
Atpase Copb-B Upon Nucleotide Binding
pdb|2YJ5|A Chain A, Conformational Changes In The Catalytic Domain Of The Cpx-
Atpase Copb-B Upon Nucleotide Binding
pdb|2YJ5|B Chain B, Conformational Changes In The Catalytic Domain Of The Cpx-
Atpase Copb-B Upon Nucleotide Binding
pdb|2YJ6|A Chain A, Conformational Changes In The Catalytic Domain Of The
Cpx-Atpase Copb-B Upon Nucleotide Binding
pdb|2YJ6|B Chain B, Conformational Changes In The Catalytic Domain Of The
Cpx-Atpase Copb-B Upon Nucleotide Binding
Length = 263
Score = 101 bits (251), Expect = 2e-21, Method: Composition-based stats.
Identities = 76/266 (28%), Positives = 139/266 (52%), Gaps = 31/266 (11%)
Query: 368 KAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDINLNTLLYWVSS 427
K G++IK + + + ++ + F+KTGT+T G ++++F I + L + +S
Sbjct: 8 KMLHKGMIIKNSNVYEKIKEIDTIIFNKTGTLTYGTPIVTQF------IGDSLSLAYAAS 61
Query: 428 IESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFPXXXXXXXXXXXXXXXXNRKIAQRA 487
+E+ SSHP++ A+V+Y + + K +V+D++ KI+ +
Sbjct: 62 VEALSSHPIAKAIVKYAKEQGV--KILEVKDFKEI------------SGIGVRGKISDKI 107
Query: 488 GCGTVPSVDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTG 547
++ K + N ++ P+ F +SD R + + +LK+ G++ +L+G
Sbjct: 108 -------IEVKKAENNNDIAVYINGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSG 160
Query: 548 DNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEG-KTAMIGDGINDAPALATAD 606
D + + ++L + +S L PEDK +II + KQ G K MIGDG+NDA ALA AD
Sbjct: 161 DKEDKVKELSKELN--IQEYYSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALALAD 218
Query: 607 IGISMGISGSALATETGQVILMSNDI 632
+ ++MG +G ++ +IL+SNDI
Sbjct: 219 VSVAMG-NGVDISKNVADIILVSNDI 243
>pdb|2VOY|I Chain I, Cryoem Model Of Copa, The Copper Transporting Atpase From
Archaeoglobus Fulgidus
Length = 128
Score = 80.5 bits (197), Expect = 4e-15, Method: Composition-based stats.
Identities = 43/116 (37%), Positives = 70/116 (60%), Gaps = 11/116 (9%)
Query: 525 RTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFK 584
+ A AV +LK GI+ +TGDN +A +L L++V +E+LP K++ + + +
Sbjct: 24 KESAKPAVQELKRXGIKVGXITGDNWRSAEAISRELN--LDLVIAEVLPHQKSEEVKKLQ 81
Query: 585 QEGKTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIR 640
+ A +GDGINDAPALA AD+GI++G +G ++L+ +D+R V AI+
Sbjct: 82 AKEVVAFVGDGINDAPALAQADLGIAVG---------SGDIVLIRDDLRDVVAAIQ 128
>pdb|2HC8|A Chain A, Structure Of The A. Fulgidus Copa A-Domain
pdb|2VOY|F Chain F, Cryoem Model Of Copa, The Copper Transporting Atpase From
Archaeoglobus Fulgidus
Length = 113
Score = 79.0 bits (193), Expect = 1e-14, Method: Composition-based stats.
Identities = 40/109 (36%), Positives = 66/109 (60%), Gaps = 2/109 (1%)
Query: 188 MSSLMSIAPQKAIIAGTGEE--VDAGEVKLNTVLAVKAGEVIPIDGIVVDGKCEVDEKTL 245
+ L+ + + A++ G+E V EV + ++ V+ GE IP+DG+VV+G+ VDE +
Sbjct: 3 IKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESYVDESMI 62
Query: 246 TGESYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEA 294
+GE PV K KG V+ TIN G + + T V + ++A++ KLVE+A
Sbjct: 63 SGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDA 111
>pdb|2KIJ|A Chain A, Solution Structure Of The Actuator Domain Of The Copper-
Transporting Atpase Atp7a
Length = 124
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 77/126 (61%), Gaps = 4/126 (3%)
Query: 170 FTIAEWLESRASHKATAVMSSLMSIAPQKAIIAGTGEEVDAGEVKLNTVLAVKAGEVIPI 229
FT++E L S +AT ++++++ ++ + E+VD V+ ++ V G P+
Sbjct: 3 FTMSEALAKLISLQATE--ATIVTLDSDNILL--SEEQVDVELVQRGDIIKVVPGGKFPV 58
Query: 230 DGIVVDGKCEVDEKTLTGESYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAK 289
DG V++G VDE +TGE+ PV+K+ GSTV AG+IN NG + + T V D ++++ K
Sbjct: 59 DGRVIEGHSMVDESLITGEAMPVAKKPGSTVIAGSINQNGSLLICATHVGADTTLSQIVK 118
Query: 290 LVEEAQ 295
LVEEAQ
Sbjct: 119 LVEEAQ 124
>pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase
pdb|1MHS|B Chain B, Model Of Neurospora Crassa Proton Atpase
Length = 920
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 116/263 (44%), Gaps = 27/263 (10%)
Query: 157 MNDYIEAGIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAIIA--GTGEEVDAGEVK 214
+ D+++ G+I L + + +A +++ L KA++ GT +E++A EV
Sbjct: 138 LEDWVDFGVICGLLLLNAVVGFVQEFQAGSIVDELKKTLALKAVVLRDGTLKEIEAPEVV 197
Query: 215 LNTVLAVKAGEVIPIDGIVV--DGKCEVDEKTLTGESYPVSKQKGSTVWAGTINLNGYIS 272
+L V+ G +IP DG +V D +VD+ LTGES V K KG V+A + G
Sbjct: 198 PGDILQVEEGTIIPADGRIVTDDAFLQVDQSALTGESLAVDKHKGDQVFASSAVKRGEAF 257
Query: 273 VETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVDKFSQ------YYTPAVIFISACVAVI 326
V TA ++ V + A LV A ++ +T ++++S+
Sbjct: 258 VVITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVWVSSFYRSN 317
Query: 327 PIALGVSNHKQWFHLALVVLVSACPCAL--ILSTPVVT---YCALTKAATSGLLIKGGDY 381
PI Q L + + P L +++T + Y A KA L
Sbjct: 318 PIV-------QILEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKAIVQKL-----SA 365
Query: 382 LQTLAKVRFMAFDKTGTITRGEF 404
+++LA V + DKTGT+T+ +
Sbjct: 366 IESLAGVEILCSDKTGTLTKNKL 388
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 39/216 (18%)
Query: 515 VGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVH------ 568
+GI D R + V + K+LG+ MLTGD A + QLG N+ +
Sbjct: 527 LGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGL 586
Query: 569 ---------------------SELLPEDKAKIINQFKQEGK-TAMIGDGINDAPALATAD 606
+E+ P+ K ++ +Q G AM GDG+NDAP+L AD
Sbjct: 587 GGGGDMPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKAD 646
Query: 607 IGISMGISGSALATETGQVILMSNDIRKVPEAIRLAR----KAHWKVIENIAVSIATK-- 660
GI++ S A A ++ ++ + + +A++ +R + + V+ IA+SI +
Sbjct: 647 TGIAVEGSSDA-ARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVYRIALSIHLEIF 705
Query: 661 ----AGIIALALGGHPLVWAAVLADVGTCLIVILNS 692
I+ +L +V+ A+ ADV T I N+
Sbjct: 706 LGLWIAILNRSLNIELVVFIAIFADVATLAIAYDNA 741
>pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump
pdb|3B8E|C Chain C, Crystal Structure Of The Sodium-Potassium Pump
pdb|3KDP|A Chain A, Crystal Structure Of The Sodium-potassium Pump
pdb|3KDP|C Chain C, Crystal Structure Of The Sodium-potassium Pump
Length = 998
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 108/241 (44%), Gaps = 20/241 (8%)
Query: 183 KATAVMSSLMSIAPQKAIIAGTGEE--VDAGEVKLNTVLAVKAGEVIPID-GIVVDGKCE 239
K++ +M S ++ PQ+A++ GE+ ++A EV + ++ VK G+ IP D I+ C+
Sbjct: 128 KSSKIMESFKNMVPQQALVIRNGEKMSINAEEVVVGDLVEVKGGDRIPADLRIISANGCK 187
Query: 240 VDEKTLTGESYPVSKQKGST----VWAGTINLNGYISVETTA------VAEDCVVAKMAK 289
VD +LTGES P ++ T + I VE TA + V+ ++A
Sbjct: 188 VDNSSLTGESEPQTRSPDFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIAT 247
Query: 290 LVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALV---VL 346
L + ++ I ++ F T +F+ ++ + L W + ++
Sbjct: 248 LASGLEGGQTPIAAEIEHFIHIITGVAVFLGVSFFILSLIL----EYTWLEAVIFLIGII 303
Query: 347 VSACPCALILSTPVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVM 406
V+ P L+ + V + A L+K + ++TL + DKTGT+T+ +
Sbjct: 304 VANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTV 363
Query: 407 S 407
+
Sbjct: 364 A 364
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 87/215 (40%), Gaps = 56/215 (26%)
Query: 496 DGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAM- 554
+G + + + + VG+ + D R +AV + +S GI+ M+TGD+ A
Sbjct: 542 EGFQFDTDDVNFPLDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKA 601
Query: 555 ----------------------------------------------QAQEQLGNALN--- 565
EQL + L
Sbjct: 602 IAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDDILKYHT 661
Query: 566 -VVHSELLPEDKAKIINQFKQEGK-TAMIGDGINDAPALATADIGISMGISGSALATETG 623
+V + P+ K I+ +++G A+ GDG+ND+PA ADIG++MGI+GS ++ +
Sbjct: 662 EIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPASKKADIGVAMGIAGSDVSKQAA 721
Query: 624 QVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIA 658
+IL+ ++ + + R + +N+ SIA
Sbjct: 722 DMILLDDNFASIVTGVEEGR----LIFDNLKKSIA 752
>pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The
E2.2k+.Pi State
pdb|3A3Y|A Chain A, Crystal Structure Of The Sodium-potassium Pump With Bound
Potassium And Ouabain
Length = 1028
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 106/258 (41%), Gaps = 69/258 (26%)
Query: 498 PKMKGNTIGYIFSGASP---------VGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGD 548
P+ K N GY F P VG+ + D R +AV + +S GI+ M+TGD
Sbjct: 566 PEDKYNE-GYPFDADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGD 624
Query: 549 NQ-------------SAAMQAQEQLGNALNV----------------------------- 566
+ S + E + LN+
Sbjct: 625 HPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVLD 684
Query: 567 ----VHSELL-----PEDKAKIINQFKQEGK-TAMIGDGINDAPALATADIGISMGISGS 616
H+E++ P+ K I+ +++G A+ GDG+ND+PAL ADIG++MGISGS
Sbjct: 685 DILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGS 744
Query: 617 ALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATK----AGIIALALGGHP 672
++ + +IL+ ++ + + R + ++IA ++ + + +G P
Sbjct: 745 DVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNVP 804
Query: 673 LVWAAVL---ADVGTCLI 687
L V D+GT ++
Sbjct: 805 LPLGTVTILCIDLGTDMV 822
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 112/241 (46%), Gaps = 20/241 (8%)
Query: 183 KATAVMSSLMSIAPQKAIIAGTGEE--VDAGEVKLNTVLAVKAGEVIPIDGIVVDG-KCE 239
K++ +M S ++ PQ+A++ GE+ ++A V ++ VK G+ IP D ++ C+
Sbjct: 158 KSSRIMDSFKNMVPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPADLRIISAHGCK 217
Query: 240 VDEKTLTGESYPVSK--QKGSTVWAGTINLNGYIS--VETTA------VAEDCVVAKMAK 289
VD +LTGES P ++ + S T N+ + + VE TA + V+ ++A
Sbjct: 218 VDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIAT 277
Query: 290 LVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALV---VL 346
L + ++ I ++ F T +F+ ++ + LG S W + ++
Sbjct: 278 LASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSFFILSLILGYS----WLEAVIFLIGII 333
Query: 347 VSACPCALILSTPVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVM 406
V+ P L+ + V + A L+K + ++TL + DKTGT+T+ +
Sbjct: 334 VANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTV 393
Query: 407 S 407
+
Sbjct: 394 A 394
>pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between
Ouabain And The E2p Form Of The Sodium-Potassium Pump
pdb|3N23|C Chain C, Crystal Structure Of The High Affinity Complex Between
Ouabain And The E2p Form Of The Sodium-Potassium Pump
pdb|3N2F|A Chain A, Crystal Structure Of The Sodium-Potassium Pump
pdb|3N2F|C Chain C, Crystal Structure Of The Sodium-Potassium Pump
Length = 992
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 107/241 (44%), Gaps = 20/241 (8%)
Query: 183 KATAVMSSLMSIAPQKAIIAGTGEE--VDAGEVKLNTVLAVKAGEVIPID-GIVVDGKCE 239
K++ +M S ++ PQ+A++ GE+ ++A EV + ++ VK G+ IP D I+ C+
Sbjct: 122 KSSKIMESFKNMVPQQALVIRNGEKMSINAEEVVVGDLVEVKGGDRIPADLRIISANGCK 181
Query: 240 VDEKTLTGESYPVSKQKGST----VWAGTINLNGYISVETTA------VAEDCVVAKMAK 289
VD +LTGES P ++ T + I VE TA + V+ ++A
Sbjct: 182 VDNSSLTGESEPQTRSPDFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIAT 241
Query: 290 LVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALV---VL 346
L + ++ I ++ F T +F+ ++ + L W + ++
Sbjct: 242 LASGLEGGQTPIAAEIEHFIHIITGVAVFLGVSFFILSLIL----EYTWLEAVIFLIGII 297
Query: 347 VSACPCALILSTPVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVM 406
V+ P L+ + V + A L+K + ++TL + KTGT+T+ +
Sbjct: 298 VANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSXKTGTLTQNRMTV 357
Query: 407 S 407
+
Sbjct: 358 A 358
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 87/215 (40%), Gaps = 56/215 (26%)
Query: 496 DGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAM- 554
+G + + + + VG+ + D R +AV + +S GI+ M+TGD+ A
Sbjct: 536 EGFQFDTDDVNFPLDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKA 595
Query: 555 ----------------------------------------------QAQEQLGNALN--- 565
EQL + L
Sbjct: 596 IAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDDILKYHT 655
Query: 566 -VVHSELLPEDKAKIINQFKQEGK-TAMIGDGINDAPALATADIGISMGISGSALATETG 623
+V + P+ K I+ +++G A+ GDG+ND+PA ADIG++MGI+GS ++ +
Sbjct: 656 EIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPASKKADIGVAMGIAGSDVSKQAA 715
Query: 624 QVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIA 658
+IL+ ++ + + R + +N+ SIA
Sbjct: 716 DMILLDDNFASIVTGVEEGR----LIFDNLKKSIA 746
>pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The
Absence Of Calcium
pdb|2EAR|A Chain A, P21 Crystal Of The Sr Ca2+-Atpase With Bound Tg
pdb|2EAT|A Chain A, Crystal Structure Of The Sr Ca2+-Atpase With Bound Cpa And
Tg
pdb|2ZBF|A Chain A, Calcium Pump Crystal Structure With Bound Bef3 And Tg In
The Absence Of Calcium
pdb|2ZBG|A Chain A, Calcium Pump Crystal Structure With Bound Alf4 And Tg In
The Absence Of Calcium
pdb|3AR2|A Chain A, Calcium Pump Crystal Structure With Bound Amppcp And Ca2+
pdb|3AR3|A Chain A, Calcium Pump Crystal Structure With Bound Adp And Tg
pdb|3AR4|A Chain A, Calcium Pump Crystal Structure With Bound Atp And Tg In
The Absence Of Ca2+
pdb|3AR5|A Chain A, Calcium Pump Crystal Structure With Bound Tnp-Amp And Tg
pdb|3AR6|A Chain A, Calcium Pump Crystal Structure With Bound Tnp-Adp And Tg
In The Absence Of Calcium
pdb|3AR7|A Chain A, Calcium Pump Crystal Structure With Bound Tnp-Atp And Tg
In The Absence Of Ca2+
pdb|3AR8|A Chain A, Calcium Pump Crystal Structure With Bound Alf4, Tnp-Amp
And Tg
pdb|3AR9|A Chain A, Calcium Pump Crystal Structure With Bound Bef3, Tnp-Amp
And Tg In The Absence Of Calcium
pdb|2ZBE|A Chain A, Calcium Pump Crystal Structure With Bound Bef3 In The
Absence Of Calcium And Tg
pdb|2ZBE|B Chain B, Calcium Pump Crystal Structure With Bound Bef3 In The
Absence Of Calcium And Tg
pdb|2ZBD|A Chain A, Crystal Structure Of The Sr Calcium Pump With Bound
Aluminium Fluoride, Adp And Calcium
Length = 995
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 42/208 (20%)
Query: 515 VGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLG------------- 561
VG+ + D R ++ + GIR M+TGDN+ A+ ++G
Sbjct: 595 VGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAY 654
Query: 562 -----NALNVVH-----------SELLPEDKAKIINQFKQEGK-TAMIGDGINDAPALAT 604
+ L + + + P K+KI+ + + TAM GDG+NDAPAL
Sbjct: 655 TGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKK 714
Query: 605 ADIGISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAG-- 662
A+IGI+MG SG+A+A +++L ++ + A+ R + + + I I++ G
Sbjct: 715 AEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEV 773
Query: 663 --IIALALGGHP-------LVWAAVLAD 681
I A G P L+W ++ D
Sbjct: 774 VCIFLTAALGLPEALIPVQLLWVNLVTD 801
Score = 33.9 bits (76), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 128/315 (40%), Gaps = 53/315 (16%)
Query: 136 IRNFK-LDINILVLIAVI---------GTIAMNDYIEAGIIVFLFT----IAEWLESRAS 181
I F+ L + IL+L A I G + ++E +I+ + + W E A
Sbjct: 55 IEQFEDLLVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAE 114
Query: 182 HKATAVMSSLMSIAPQKAIIAGTGEEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGK---C 238
+ A+ + + + + A ++ ++ V G+ +P D ++ K
Sbjct: 115 NAIEALKEYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTL 174
Query: 239 EVDEKTLTGESYPVSK-------------QKGSTVWAGTINLNGYIS--VETTAVAEDCV 283
VD+ LTGES V K K + +++GT G V TT V+ +
Sbjct: 175 RVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTE-- 232
Query: 284 VAKMAKLVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHK------- 336
+ K+ + + K+ +Q+ +D+F + + + I CVAV I +G N
Sbjct: 233 IGKIRDQMAATEQDKTPLQQKLDEFGEQLSKVISLI--CVAVWLINIGHFNDPVHGGSWI 290
Query: 337 ----QWFHLALVVLVSACPCALILSTPVVTYC---ALTKAATSGLLIKGGDYLQTLAKVR 389
+F +A+ + V+A P L V+T C + A +++ ++TL
Sbjct: 291 RGAIYYFKIAVALAVAAIPEGL---PAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTS 347
Query: 390 FMAFDKTGTITRGEF 404
+ DKTGT+T +
Sbjct: 348 VICSDKTGTLTTNQM 362
>pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State
pdb|1IWO|A Chain A, Crystal Structure Of The Sr Ca2+-Atpase In The Absence Of
Ca2+
pdb|1IWO|B Chain B, Crystal Structure Of The Sr Ca2+-Atpase In The Absence Of
Ca2+
pdb|1SU4|A Chain A, Crystal Structure Of Calcium Atpase With Two Bound Calcium
Ions
pdb|1T5S|A Chain A, Structure Of The (sr)ca2+-atpase Ca2-e1-amppcp Form
pdb|1T5T|A Chain A, Structure Of The (Sr)ca2+-Atpase Ca2-E1-Adp:alf4- Form
pdb|1VFP|A Chain A, Crystal Structure Of The Sr Ca2+-Atpase With Bound Amppcp
pdb|1VFP|B Chain B, Crystal Structure Of The Sr Ca2+-Atpase With Bound Amppcp
pdb|1WPG|A Chain A, Crystal Structure Of The Sr Ca2+-Atpase With Mgf4
pdb|1WPG|B Chain B, Crystal Structure Of The Sr Ca2+-Atpase With Mgf4
pdb|1WPG|C Chain C, Crystal Structure Of The Sr Ca2+-Atpase With Mgf4
pdb|1WPG|D Chain D, Crystal Structure Of The Sr Ca2+-Atpase With Mgf4
pdb|1XP5|A Chain A, Structure Of The (Sr)ca2+-Atpase E2-Alf4- Form
pdb|2AGV|A Chain A, Crystal Structure Of The Sr Ca2+-atpase With Bhq And Tg
pdb|2AGV|B Chain B, Crystal Structure Of The Sr Ca2+-atpase With Bhq And Tg
pdb|2BY4|A Chain A, Sr Ca(2+)-Atpase In The Hne2 State Complexed With The
Thapsigargin Derivative Boc-12adt.
pdb|2C88|A Chain A, Crystal Structure Of (Sr) Calcium-Atpase E2(Tg):amppcp
Form
pdb|2C8K|A Chain A, Crystal Structure Of (Sr) Calcium-Atpase E2(Tg) With
Partially Occupied Amppcp Site
pdb|2C8L|A Chain A, Crystal Structure Of (Sr) Calcium-Atpase E2(Tg) Form
pdb|2C9M|A Chain A, Structure Of (Sr) Calcium-Atpase In The Ca2e1 State Solved
In A P1 Crystal Form.
pdb|2C9M|B Chain B, Structure Of (Sr) Calcium-Atpase In The Ca2e1 State Solved
In A P1 Crystal Form.
pdb|2O9J|A Chain A, Crystal Structure Of Calcium Atpase With Bound Magnesium
Fluoride And Cyclopiazonic Acid
pdb|2OA0|A Chain A, Crystal Structure Of Calcium Atpase With Bound Adp And
Cyclopiazonic Acid
pdb|3B9B|A Chain A, Structure Of The E2 Beryllium Fluoride Complex Of The
Serca Ca2+-Atpase
pdb|3B9R|A Chain A, Serca Ca2+-Atpase E2 Aluminium Fluoride Complex Without
Thapsigargin
pdb|3B9R|B Chain B, Serca Ca2+-Atpase E2 Aluminium Fluoride Complex Without
Thapsigargin
pdb|2EAS|A Chain A, Crystal Structure Of The Sr Ca2+-Atpase With Bound Cpa
pdb|2EAU|A Chain A, Crystal Structure Of The Sr Ca2+-Atpase With Bound Cpa In
The Presence Of Curcumin
pdb|3FGO|A Chain A, Crystal Structure Of The E2 Magnesium Fluoride Complex Of
The (Sr) Ca2+-Atpase With Bound Cpa And Amppcp
pdb|3FGO|B Chain B, Crystal Structure Of The E2 Magnesium Fluoride Complex Of
The (Sr) Ca2+-Atpase With Bound Cpa And Amppcp
pdb|3FPB|A Chain A, The Structure Of Sarcoplasmic Reticulum Ca2+-Atpase Bound
To Cyclopiazonic Acid With Atp
pdb|3FPS|A Chain A, The Structure Of Sarcoplasmic Reticulum Ca2+-Atpase Bound
To Cyclopiazonic And Adp
pdb|3NAL|A Chain A, Sr Ca(2+)-Atpase In The Hne2 State Complexed With The
Thapsigargin Derivative Dtb
pdb|3NAM|A Chain A, Sr Ca(2+)-Atpase In The Hne2 State Complexed With The
Thapsigargin Derivative Dotg
pdb|3NAN|A Chain A, Sr Ca(2+)-Atpase In The Hne2 State Complexed With A
Thapsigargin Derivative Boc-(Phi)tg
pdb|3N5K|A Chain A, Structure Of The (sr)ca2+-atpase E2-alf4- Form
pdb|3N5K|B Chain B, Structure Of The (sr)ca2+-atpase E2-alf4- Form
pdb|3N8G|A Chain A, Structure Of The (sr)ca2+-atpase Ca2-e1-caamppcp Form
pdb|2YFY|A Chain A, Serca In The Hne2 State Complexed With Debutanoyl
Thapsigargin
Length = 994
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 42/208 (20%)
Query: 515 VGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLG------------- 561
VG+ + D R ++ + GIR M+TGDN+ A+ ++G
Sbjct: 594 VGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAY 653
Query: 562 -----NALNVVH-----------SELLPEDKAKIINQFKQEGK-TAMIGDGINDAPALAT 604
+ L + + + P K+KI+ + + TAM GDG+NDAPAL
Sbjct: 654 TGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKK 713
Query: 605 ADIGISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAG-- 662
A+IGI+MG SG+A+A +++L ++ + A+ R + + + I I++ G
Sbjct: 714 AEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEV 772
Query: 663 --IIALALGGHP-------LVWAAVLAD 681
I A G P L+W ++ D
Sbjct: 773 VCIFLTAALGLPEALIPVQLLWVNLVTD 800
Score = 33.9 bits (76), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 128/315 (40%), Gaps = 53/315 (16%)
Query: 136 IRNFK-LDINILVLIAVI---------GTIAMNDYIEAGIIVFLFT----IAEWLESRAS 181
I F+ L + IL+L A I G + ++E +I+ + + W E A
Sbjct: 54 IEQFEDLLVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAE 113
Query: 182 HKATAVMSSLMSIAPQKAIIAGTGEEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGK---C 238
+ A+ + + + + A ++ ++ V G+ +P D ++ K
Sbjct: 114 NAIEALKEYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTL 173
Query: 239 EVDEKTLTGESYPVSK-------------QKGSTVWAGTINLNGYIS--VETTAVAEDCV 283
VD+ LTGES V K K + +++GT G V TT V+ +
Sbjct: 174 RVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTE-- 231
Query: 284 VAKMAKLVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHK------- 336
+ K+ + + K+ +Q+ +D+F + + + I CVAV I +G N
Sbjct: 232 IGKIRDQMAATEQDKTPLQQKLDEFGEQLSKVISLI--CVAVWLINIGHFNDPVHGGSWI 289
Query: 337 ----QWFHLALVVLVSACPCALILSTPVVTYC---ALTKAATSGLLIKGGDYLQTLAKVR 389
+F +A+ + V+A P L V+T C + A +++ ++TL
Sbjct: 290 RGAIYYFKIAVALAVAAIPEGL---PAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTS 346
Query: 390 FMAFDKTGTITRGEF 404
+ DKTGT+T +
Sbjct: 347 VICSDKTGTLTTNQM 361
>pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The
Serca Ca2+-Atpase
Length = 994
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 42/208 (20%)
Query: 515 VGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLG------------- 561
VG+ + D R ++ + GIR M+TGDN+ A+ ++G
Sbjct: 594 VGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAY 653
Query: 562 -----NALNVVH-----------SELLPEDKAKIINQFKQEGK-TAMIGDGINDAPALAT 604
+ L + + + P K+KI+ + + TAM GDG+NDAPAL
Sbjct: 654 TGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKK 713
Query: 605 ADIGISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAG-- 662
A+IGI+MG SG+A+A +++L ++ + A+ R + + + I I++ G
Sbjct: 714 AEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEV 772
Query: 663 --IIALALGGHP-------LVWAAVLAD 681
I A G P L+W ++ D
Sbjct: 773 VCIFLTAALGLPEALIPVQLLWVNLVTD 800
Score = 30.8 bits (68), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 127/315 (40%), Gaps = 53/315 (16%)
Query: 136 IRNFK-LDINILVLIAVI---------GTIAMNDYIEAGIIVFLFT----IAEWLESRAS 181
I F+ L + IL+L A I G + ++E +I+ + + W E A
Sbjct: 54 IEQFEDLLVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAE 113
Query: 182 HKATAVMSSLMSIAPQKAIIAGTGEEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGK---C 238
+ A+ + + + + A ++ ++ V G+ +P D ++ K
Sbjct: 114 NAIEALKEYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTL 173
Query: 239 EVDEKTLTGESYPVSK-------------QKGSTVWAGTINLNGYIS--VETTAVAEDCV 283
VD+ LTGES V K K + +++GT G V TT V+ +
Sbjct: 174 RVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTE-- 231
Query: 284 VAKMAKLVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHK------- 336
+ K+ + + K+ +Q+ +D+F + + + I CVAV I +G N
Sbjct: 232 IGKIRDQMAATEQDKTPLQQKLDEFGEQLSKVISLI--CVAVWLINIGHFNDPVHGGSWI 289
Query: 337 ----QWFHLALVVLVSACPCALILSTPVVTYC---ALTKAATSGLLIKGGDYLQTLAKVR 389
+F +A+ + V+A P L V+T C + A +++ ++TL
Sbjct: 290 RGAIYYFKIAVALAVAAIPEGL---PAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTS 346
Query: 390 FMAFDKTGTITRGEF 404
+ KTGT+T +
Sbjct: 347 VICSXKTGTLTTNQM 361
>pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride
pdb|2XZB|A Chain A, Pig Gastric H,K-Atpase With Bound Bef And Sch28080
pdb|2YN9|A Chain A, Cryo-em Structure Of Gastric H+,k+-atpase With Bound
Rubidium
Length = 1034
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 111/240 (46%), Gaps = 16/240 (6%)
Query: 182 HKATAVMSSLMSIAPQKAIIAGTGE--EVDAGEVKLNTVLAVKAGEVIPIDGIVVDGKC- 238
K+T +++S ++ PQ+A + G+ +++A ++ + ++ +K G+ +P D ++ +
Sbjct: 162 FKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVPADIRILQAQGR 221
Query: 239 EVDEKTLTGESYPVSKQKGST----------VWAGTINLNGYISVETTAVAEDCVVAKMA 288
+VD +LTGES P ++ T + T+ L G + ++ ++A
Sbjct: 222 KVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIA 281
Query: 289 KLVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQW-FHLALVVLV 347
L +N K+ I ++ F I A ++ + +G + + F +A+VV
Sbjct: 282 SLASGVENEKTPIAIEIEHFVDIIAGLAILFGATFFIVAMCIGYTFLRAMVFFMAIVV-- 339
Query: 348 SACPCALILSTPVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMS 407
+ P L+ + V + A+ ++K + ++TL + DKTGT+T+ +S
Sbjct: 340 AYVPEGLLATVTVCLSLTAKRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVS 399
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 85/202 (42%), Gaps = 58/202 (28%)
Query: 510 SGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAA---------------- 553
SG S G+ + D R +AV + ++ GIR M+TGD+ A
Sbjct: 591 SGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSET 650
Query: 554 ---------------------------MQAQE----QLGNALNVVHSELL-----PEDKA 577
MQ ++ +L AL H E++ P+ K
Sbjct: 651 VEDIAARLRVPVDQVNRKDARACVINGMQLKDMDPSELVEALRT-HPEMVFARTSPQQKL 709
Query: 578 KIINQFKQEGK-TAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVP 636
I+ ++ G A+ GDG+ND+PAL ADIG++MGI+GS A +IL+ ++ +
Sbjct: 710 VIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMILLDDNFASIV 769
Query: 637 EAIRLARKAHWKVIENIAVSIA 658
+ R + +N+ SIA
Sbjct: 770 TGVEQGR----LIFDNLKKSIA 787
>pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase
(Serca) From Bovine Muscle
Length = 992
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 42/208 (20%)
Query: 515 VGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLG------------- 561
VG+ + D R ++ + GIR M+TGDN+ A+ ++G
Sbjct: 593 VGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEDVADRAY 652
Query: 562 -----NALNVVH-----------SELLPEDKAKIINQFKQ-EGKTAMIGDGINDAPALAT 604
+ L + + + P K+KI+ + + TAM GDG+NDAPAL
Sbjct: 653 TGREFDDLPLAEQREACRRACCFARVEPTHKSKIVEYLQSFDEITAMTGDGVNDAPALKK 712
Query: 605 ADIGISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAG-- 662
A+IGI+MG SG+A+A +++L ++ + A+ R + + + I I++ G
Sbjct: 713 AEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEV 771
Query: 663 --IIALALGGHP-------LVWAAVLAD 681
I A G P L+W ++ D
Sbjct: 772 VCIFLTAALGLPEALIPVQLLWVNLVTD 799
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 99/231 (42%), Gaps = 39/231 (16%)
Query: 206 EEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGK---CEVDEKTLTGESYPVSK-------- 254
+ + A ++ ++ V G+ +P D ++ K VD+ LTGES V K
Sbjct: 138 QRIKARDIVPGDIVEVAVGDKVPADIRILTIKSTTLRVDQSILTGESVSVIKHTEPVPDP 197
Query: 255 -----QKGSTVWAGT-INLNGYIS-VETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVDK 307
K + +++GT I I V TT V + + K+ + + K+ +Q+ +D+
Sbjct: 198 RAVNQDKKNMLFSGTNIAAGKAIGIVATTGVGTE--IGKIRDQMAATEQDKTPLQQKLDE 255
Query: 308 FSQYYTPAVIFISACVAVIPIALGVSNHK-----------QWFHLALVVLVSACPCALIL 356
F + + + I CVAV I +G N +F +A+ + V+A P L
Sbjct: 256 FGEQLSKVISLI--CVAVWLINIGHFNDPVHGGSWIRGAIYYFKIAVALAVAAIPEGL-- 311
Query: 357 STPVVTYC---ALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEF 404
V+T C + A +++ ++TL + DKTGT+T +
Sbjct: 312 -PAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQM 361
>pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump
pdb|3B8C|B Chain B, Crystal Structure Of A Plasma Membrane Proton Pump
Length = 885
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 90/211 (42%), Gaps = 41/211 (19%)
Query: 515 VGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSELL-- 572
VG+ L D R +AE + + +LG+ M+TGD + + +LG N+ S L
Sbjct: 480 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLG 539
Query: 573 --------------------------PEDKAKIINQFKQEGK--TAMIGDGINDAPALAT 604
PE K +I+ + QE K M GDG+NDAPAL
Sbjct: 540 THKDANLASIPVEELIEKADGFAGVFPEHKYEIVKKL-QERKHIVGMTGDGVNDAPALKK 598
Query: 605 ADIGISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKV----IENIAVSIATK 660
ADIGI++ + A A ++L + + A+ +R ++ I ++++I
Sbjct: 599 ADIGIAVADATDA-ARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 657
Query: 661 AGIIALALGGHPLVWAAVLADVGTCLIVILN 691
G + +A L+W + +I ILN
Sbjct: 658 FGFMLIA-----LIWEFDFSAFMVLIIAILN 683
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 92/206 (44%), Gaps = 6/206 (2%)
Query: 198 KAIIAGTGEEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGK-CEVDEKTLTGESYPVSKQK 256
K + G E +A + ++++K G++IP D +++G +VD+ LTGES PV+K
Sbjct: 133 KVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKHP 192
Query: 257 GSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVDKFSQY--YTP 314
G V++G+ G I A K A LV ++ N Q+ + + +
Sbjct: 193 GQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLV-DSTNQVGHFQKVLTAIGNFCICSI 251
Query: 315 AVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCALTKAATSGL 374
A+ + + + PI ++ LV+L+ P A+ V + + G
Sbjct: 252 AIGMVIEIIVMYPIQR--RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGA 309
Query: 375 LIKGGDYLQTLAKVRFMAFDKTGTIT 400
+ K ++ +A + + DKTGT+T
Sbjct: 310 ITKRMTAIEEMAGMDVLCSDKTGTLT 335
>pdb|2ROP|A Chain A, Solution Structure Of Domains 3 And 4 Of Human Atp7b
Length = 202
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 39/66 (59%)
Query: 12 SYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQA 71
+ + G+ C+S V IE ++ LEGV+++SV + T VL++ +IS ++ A+
Sbjct: 124 TLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEELRAAIEDM 183
Query: 72 RFEANV 77
FEA+V
Sbjct: 184 GFEASV 189
>pdb|1L7M|A Chain A, High Resolution Liganded Structure Of Phosphoserine
Phosphatase (Pi Complex)
pdb|1L7M|B Chain B, High Resolution Liganded Structure Of Phosphoserine
Phosphatase (Pi Complex)
pdb|1L7N|A Chain A, Transition State Analogue Of Phosphoserine Phosphatase
(Aluminum Fluoride Complex)
pdb|1L7N|B Chain B, Transition State Analogue Of Phosphoserine Phosphatase
(Aluminum Fluoride Complex)
Length = 211
Score = 38.5 bits (88), Expect = 0.018, Method: Composition-based stats.
Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 22/134 (16%)
Query: 527 GAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLG------NALNV--------VHSELL 572
GA E + +LK+ G A+++G A + +E+LG N L V V E+L
Sbjct: 80 GAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVL 139
Query: 573 PED-KAKIINQF-KQEG----KTAMIGDGINDAPALATADIGISMGISGSALATETGQVI 626
E+ K +I+ + K EG T +GDG ND A G+ + + E +
Sbjct: 140 KENAKGEILEKIAKIEGINLEDTVAVGDGANDISXFKKA--GLKIAFCAKPILKEKADIC 197
Query: 627 LMSNDIRKVPEAIR 640
+ D+R++ + I+
Sbjct: 198 IEKRDLREILKYIK 211
>pdb|1L7O|A Chain A, Crystal Structure Of Phosphoserine Phosphatase In Apo Form
pdb|1L7O|B Chain B, Crystal Structure Of Phosphoserine Phosphatase In Apo Form
pdb|1L7P|A Chain A, Substrate Bound Phosphoserine Phosphatase Complex
Structure
pdb|1L7P|B Chain B, Substrate Bound Phosphoserine Phosphatase Complex
Structure
Length = 211
Score = 38.5 bits (88), Expect = 0.018, Method: Composition-based stats.
Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 22/134 (16%)
Query: 527 GAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLG------NALNV--------VHSELL 572
GA E + +LK+ G A+++G A + +E+LG N L V V E+L
Sbjct: 80 GAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVL 139
Query: 573 PED-KAKIINQF-KQEG----KTAMIGDGINDAPALATADIGISMGISGSALATETGQVI 626
E+ K +I+ + K EG T +GDG ND A G+ + + E +
Sbjct: 140 KENAKGEILEKIAKIEGINLEDTVAVGDGANDISXFKKA--GLKIAFCAKPILKEKADIC 197
Query: 627 LMSNDIRKVPEAIR 640
+ D+R++ + I+
Sbjct: 198 IEKRDLREILKYIK 211
>pdb|1F5S|A Chain A, Crystal Structure Of Phosphoserine Phosphatase From
Methanococcus Jannaschii
pdb|1F5S|B Chain B, Crystal Structure Of Phosphoserine Phosphatase From
Methanococcus Jannaschii
Length = 211
Score = 38.5 bits (88), Expect = 0.021, Method: Composition-based stats.
Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 22/134 (16%)
Query: 527 GAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLG------NALNV--------VHSELL 572
GA E + +LK+ G A+++G A + +E+LG N L V V E+L
Sbjct: 80 GAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVL 139
Query: 573 PED-KAKIINQF-KQEG----KTAMIGDGINDAPALATADIGISMGISGSALATETGQVI 626
E+ K +I+ + K EG T +GDG ND A G+ + + E +
Sbjct: 140 KENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKA--GLKIAFCAKPILKEKADIC 197
Query: 627 LMSNDIRKVPEAIR 640
+ D+R++ + I+
Sbjct: 198 IEKRDLREILKYIK 211
>pdb|1J97|A Chain A, Phospho-Aspartyl Intermediate Analogue Of Phosphoserine
Phosphatase
pdb|1J97|B Chain B, Phospho-Aspartyl Intermediate Analogue Of Phosphoserine
Phosphatase
Length = 211
Score = 38.5 bits (88), Expect = 0.021, Method: Composition-based stats.
Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 22/134 (16%)
Query: 527 GAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLG------NALNV--------VHSELL 572
GA E + +LK+ G A+++G A + +E+LG N L V V E+L
Sbjct: 80 GAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVL 139
Query: 573 PED-KAKIINQF-KQEG----KTAMIGDGINDAPALATADIGISMGISGSALATETGQVI 626
E+ K +I+ + K EG T +GDG ND A G+ + + E +
Sbjct: 140 KENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKA--GLKIAFCAKPILKEKADIC 197
Query: 627 LMSNDIRKVPEAIR 640
+ D+R++ + I+
Sbjct: 198 IEKRDLREILKYIK 211
>pdb|2WZ1|A Chain A, Structure Of The Catalytic Domain Of Human Soluble
Guanylate Cyclase 1 Beta 3.
pdb|2WZ1|B Chain B, Structure Of The Catalytic Domain Of Human Soluble
Guanylate Cyclase 1 Beta 3
Length = 219
Score = 34.3 bits (77), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 50/128 (39%), Gaps = 17/128 (13%)
Query: 498 PKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQ 557
P + + + +FSG FC A GA + VN L L R LT ++ +
Sbjct: 6 PAKRYDNVTILFSGIVGFNAFCSKHASGEGAMKIVNLLNDLYTRFDTLTDSRKNPFVYKV 65
Query: 558 EQLGNALNVVHSELLPE--------------DKAKIINQFKQEGKTAMIGDGINDAPALA 603
E +G+ V LPE D +I Q + +G++ I GI+ +
Sbjct: 66 ETVGDKYMTVSG--LPEPCIHHARSICHLALDMMEIAGQVQVDGESVQITIGIHTG-EVV 122
Query: 604 TADIGISM 611
T IG M
Sbjct: 123 TGVIGQRM 130
>pdb|1AW0|A Chain A, Fourth Metal-Binding Domain Of The Menkes Copper-
Transporting Atpase, Nmr, 20 Structures
pdb|2AW0|A Chain A, Fourth Metal-Binding Domain Of The Menkes Copper-
Transporting Atpase, Nmr, 20 Structures
Length = 72
Score = 33.5 bits (75), Expect = 0.66, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 35/68 (51%)
Query: 10 QKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALN 69
Q++ ++ G+ C+S V IE ++ GVK + V + + V +D LL S + A+
Sbjct: 3 QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIE 62
Query: 70 QARFEANV 77
F+A +
Sbjct: 63 DMGFDATL 70
>pdb|4B6J|A Chain A, Crystal Structure Of Phosphoserine Phosphatase From T.
Onnurineus
pdb|4B6J|B Chain B, Crystal Structure Of Phosphoserine Phosphatase From T.
Onnurineus
pdb|4B6J|C Chain C, Crystal Structure Of Phosphoserine Phosphatase From T.
Onnurineus
pdb|4B6J|D Chain D, Crystal Structure Of Phosphoserine Phosphatase From T.
Onnurineus
Length = 201
Score = 32.0 bits (71), Expect = 2.0, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 14/103 (13%)
Query: 528 AAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHS----------ELLPEDKA 577
A E V L+ G + +++G + ++ ++LG+ + L DK
Sbjct: 84 ARELVETLREKGFKVVLISGSFEEV-LEPFKELGDEFMANRAIFEDGKFQGIRLRFRDKG 142
Query: 578 KIINQFKQEGKTAMIGDGINDAPALATADIGISMG--ISGSAL 618
+ + +F+ +G +GDG DA AD+GI++G I G+ L
Sbjct: 143 EFLKRFR-DGFILAMGDGYADAKMFERADMGIAVGREIPGADL 184
>pdb|4I62|A Chain A, 1.05 Angstrom Crystal Structure Of An Amino Acid Abc
Transporter Substrate-Binding Protein From Streptococcus
Pneumoniae Canada Mdr_19a Bound To L-Arginine
Length = 269
Score = 31.2 bits (69), Expect = 2.8, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 49/95 (51%), Gaps = 11/95 (11%)
Query: 548 DNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEGKTAMIGDGINDAPALATADI 607
+NQSA ++A + G + ++ + P + K++ +GK ++G I A A+AT ++
Sbjct: 26 NNQSAGIEAIKSKGKLVVALNPDFAPFEYQKVV-----DGKNQIVGSDIELAKAIAT-EL 79
Query: 608 GISMGISGSAL-----ATETGQVILMSNDIRKVPE 637
G+ + +S + + ++G+ L + + K E
Sbjct: 80 GVELELSPMSFDNVLASVQSGKADLAISGVSKTDE 114
>pdb|1OSD|A Chain A, Crystal Structure Of Oxidized Merp From Ralstonia
Metallidurans Ch34
pdb|1OSD|B Chain B, Crystal Structure Of Oxidized Merp From Ralstonia
Metallidurans Ch34
Length = 72
Score = 30.8 bits (68), Expect = 4.4, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 33/69 (47%)
Query: 10 QKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALN 69
Q V G+ CS+ ++ + +EGV +V V +R +V D S ++ KA
Sbjct: 3 QTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATA 62
Query: 70 QARFEANVR 78
A + ++V+
Sbjct: 63 DAGYPSSVK 71
>pdb|4DW8|A Chain A, Crystal Structure Of A Haloacid Dehalogenase-Like
Hydrolase (Target Efi-900331) From Bacteroides
Thetaiotaomicron With Bound Na Crystal Form I
pdb|4DWO|A Chain A, Crystal Structure Of A Haloacid Dehalogenase-Like
Hydrolase (Target Efi-900331) From Bacteroides
Thetaiotaomicron With Bound Mg Crystal Form Ii
Length = 279
Score = 30.8 bits (68), Expect = 4.5, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 592 IGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAI 639
IGDG ND + A +G++MG + + I ++ND V EAI
Sbjct: 219 IGDGYNDLSMIKFAGMGVAMG-NAQEPVKKAADYITLTNDEDGVAEAI 265
>pdb|4AP9|A Chain A, Crystal Structure Of Phosphoserine Phosphatase From
T.Onnurineus In Complex With Ndsb-201
pdb|4AP9|B Chain B, Crystal Structure Of Phosphoserine Phosphatase From
T.Onnurineus In Complex With Ndsb-201
pdb|4AP9|C Chain C, Crystal Structure Of Phosphoserine Phosphatase From
T.Onnurineus In Complex With Ndsb-201
pdb|4AP9|D Chain D, Crystal Structure Of Phosphoserine Phosphatase From
T.Onnurineus In Complex With Ndsb-201
Length = 201
Score = 30.4 bits (67), Expect = 5.6, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 46/103 (44%), Gaps = 14/103 (13%)
Query: 528 AAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHS----------ELLPEDKA 577
A E V L+ G + +++G + ++ ++LG+ + L DK
Sbjct: 84 ARELVETLREKGFKVVLISGSFEEV-LEPFKELGDEFXANRAIFEDGKFQGIRLRFRDKG 142
Query: 578 KIINQFKQEGKTAMIGDGINDAPALATADIGISMG--ISGSAL 618
+ + +F+ +G GDG DA AD GI++G I G+ L
Sbjct: 143 EFLKRFR-DGFILAXGDGYADAKXFERADXGIAVGREIPGADL 184
>pdb|1L5C|A Chain A, Solution Structure Of The Monomeric Form Of A Mutant
Unliganded Bovine Neurophysin, 20 Structures
pdb|1L5D|A Chain A, Solution Structure Of The Monomeric Form Of A Mutant
Unliganded Bovine Neurophysin, Minimized Average
Structure
pdb|2LBN|A Chain A, (Revised) Solution Structure Of The Monomeric Form Of A
Mutant Unliganded Bovine Neurophysin, 20 Structures
Length = 92
Score = 30.0 bits (66), Expect = 6.0, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 30/80 (37%), Gaps = 14/80 (17%)
Query: 759 GCKSNHFHPSDNQQLCCSD-------SKAQNRCEPEDYSSHGCDSRSNDSGSRSPNLCGN 811
G K F PS +CC D + RC+ E+Y C S GS C
Sbjct: 16 GGKGRCFGPS----ICCGDELGCFVGTAEALRCQEENYLPSPCQSGQKPCGSGGR--CAA 69
Query: 812 NQCCAGSDHGAEEDKLCDHE 831
C D G EED CD E
Sbjct: 70 AGICCSPD-GCEEDPACDPE 88
>pdb|1S6O|A Chain A, Solution Structure And Backbone Dynamics Of The Apo-Form
Of The Second Metal-Binding Domain Of The Menkes
Protein Atp7a
pdb|1S6U|A Chain A, Solution Structure And Backbone Dynamics Of The Cu(I)
Form Of The Second Metal-Binding Domain Of The Menkes
Protein Atp7a
Length = 76
Score = 30.0 bits (66), Expect = 6.4, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 33/67 (49%)
Query: 16 VLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARFEA 75
V G+ C S IE + L+GV+ + V + ++ +++ LIS ++ K + F A
Sbjct: 9 VEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPA 68
Query: 76 NVRAYGG 82
V+ G
Sbjct: 69 FVKKIEG 75
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.132 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,455,808
Number of Sequences: 62578
Number of extensions: 1143058
Number of successful extensions: 3368
Number of sequences better than 100.0: 66
Number of HSP's better than 100.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 3241
Number of HSP's gapped (non-prelim): 96
length of query: 1007
length of database: 14,973,337
effective HSP length: 108
effective length of query: 899
effective length of database: 8,214,913
effective search space: 7385206787
effective search space used: 7385206787
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)