Query 001837
Match_columns 1007
No_of_seqs 324 out of 3031
Neff 6.7
Searched_HMMs 46136
Date Fri Mar 29 10:29:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001837.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001837hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2217 ZntA Cation transport 100.0 3E-123 8E-128 1115.6 73.8 679 10-698 2-710 (713)
2 KOG0207 Cation transport ATPas 100.0 3E-120 6E-125 1066.9 56.9 696 10-708 146-912 (951)
3 PRK11033 zntA zinc/cadmium/mer 100.0 5E-108 1E-112 1009.1 72.2 682 9-699 52-740 (741)
4 PRK10671 copA copper exporting 100.0 2E-100 5E-105 956.9 72.9 678 11-699 100-831 (834)
5 TIGR01647 ATPase-IIIA_H plasma 100.0 8.7E-92 1.9E-96 867.4 57.0 579 73-692 7-648 (755)
6 TIGR01511 ATPase-IB1_Cu copper 100.0 2.5E-90 5.5E-95 830.6 63.8 531 124-673 1-552 (562)
7 TIGR01512 ATPase-IB2_Cd heavy 100.0 2.6E-89 5.6E-94 818.8 59.5 532 143-697 1-536 (536)
8 TIGR01525 ATPase-IB_hvy heavy 100.0 4.6E-88 9.9E-93 812.3 61.8 544 143-695 1-556 (556)
9 PRK10517 magnesium-transportin 100.0 8.9E-88 1.9E-92 841.6 60.1 576 74-691 74-751 (902)
10 PRK15122 magnesium-transportin 100.0 2E-87 4.3E-92 839.6 60.6 587 72-690 50-750 (903)
11 TIGR01524 ATPase-IIIB_Mg magne 100.0 2.3E-87 4.9E-92 838.0 60.0 576 72-690 38-715 (867)
12 PRK14010 potassium-transportin 100.0 2.5E-85 5.3E-90 788.0 60.6 487 166-662 72-578 (673)
13 TIGR01517 ATPase-IIB_Ca plasma 100.0 2.6E-85 5.7E-90 828.0 56.2 603 73-701 66-796 (941)
14 TIGR01522 ATPase-IIA2_Ca golgi 100.0 6.1E-85 1.3E-89 820.1 59.1 589 75-702 32-746 (884)
15 PRK01122 potassium-transportin 100.0 1.2E-83 2.5E-88 774.1 63.2 490 162-658 68-578 (679)
16 KOG0202 Ca2+ transporting ATPa 100.0 3.7E-85 8E-90 760.2 39.5 555 150-704 68-808 (972)
17 TIGR01523 ATPase-IID_K-Na pota 100.0 7.5E-82 1.6E-86 797.6 59.2 590 72-702 31-879 (1053)
18 COG0474 MgtA Cation transport 100.0 3.3E-83 7.1E-88 802.7 45.7 530 162-691 105-755 (917)
19 TIGR01497 kdpB K+-transporting 100.0 1.6E-80 3.4E-85 745.5 60.3 490 166-662 73-583 (675)
20 TIGR01106 ATPase-IIC_X-K sodiu 100.0 8.2E-81 1.8E-85 789.5 60.6 620 56-701 17-811 (997)
21 KOG0204 Calcium transporting A 100.0 6.7E-82 1.4E-86 731.6 32.6 515 170-690 199-853 (1034)
22 TIGR01116 ATPase-IIA1_Ca sarco 100.0 1.7E-78 3.6E-83 763.7 58.0 543 158-701 34-757 (917)
23 TIGR01657 P-ATPase-V P-type AT 100.0 6.7E-77 1.5E-81 758.2 56.2 578 69-690 141-911 (1054)
24 TIGR01494 ATPase_P-type ATPase 100.0 1.6E-76 3.5E-81 704.7 47.3 483 167-683 3-494 (499)
25 KOG0203 Na+/K+ ATPase, alpha s 100.0 6.8E-70 1.5E-74 631.1 17.2 515 173-690 139-820 (1019)
26 KOG0205 Plasma membrane H+-tra 100.0 7.3E-68 1.6E-72 597.5 24.6 588 72-696 41-692 (942)
27 TIGR01652 ATPase-Plipid phosph 100.0 2.1E-64 4.4E-69 645.2 47.1 551 103-688 19-883 (1057)
28 KOG0208 Cation transport ATPas 100.0 5.5E-64 1.2E-68 589.7 43.1 532 132-668 185-931 (1140)
29 COG2216 KdpB High-affinity K+ 100.0 7E-61 1.5E-65 531.9 36.7 473 170-649 76-571 (681)
30 PLN03190 aminophospholipid tra 100.0 3.1E-58 6.8E-63 584.3 53.4 495 160-667 140-951 (1178)
31 KOG0209 P-type ATPase [Inorgan 100.0 8.1E-53 1.8E-57 485.3 29.7 471 137-612 193-832 (1160)
32 KOG0210 P-type ATPase [Inorgan 100.0 1.5E-50 3.2E-55 459.2 27.1 492 158-661 130-855 (1051)
33 KOG0206 P-type ATPase [General 100.0 7.3E-44 1.6E-48 439.7 24.9 492 164-667 88-874 (1151)
34 PF00122 E1-E2_ATPase: E1-E2 A 100.0 3.7E-34 7.9E-39 307.5 21.4 220 165-384 1-230 (230)
35 PF00702 Hydrolase: haloacid d 100.0 5.8E-29 1.2E-33 262.3 7.9 207 388-606 1-215 (215)
36 COG4087 Soluble P-type ATPase 99.6 3.9E-15 8.5E-20 141.0 12.2 126 511-639 18-146 (152)
37 PF00403 HMA: Heavy-metal-asso 99.0 8.1E-10 1.8E-14 94.2 8.6 62 13-74 1-62 (62)
38 TIGR02137 HSK-PSP phosphoserin 99.0 1.2E-09 2.5E-14 115.9 10.6 115 523-642 68-198 (203)
39 COG2608 CopZ Copper chaperone 98.9 4.6E-09 1E-13 92.4 8.4 69 9-77 1-69 (71)
40 PRK11133 serB phosphoserine ph 98.9 6.8E-09 1.5E-13 117.3 11.7 114 523-640 181-316 (322)
41 TIGR00338 serB phosphoserine p 98.9 7.4E-09 1.6E-13 110.4 10.0 112 523-638 85-218 (219)
42 TIGR01670 YrbI-phosphatas 3-de 98.8 6.2E-08 1.3E-12 98.2 13.8 110 511-631 22-136 (154)
43 COG0560 SerB Phosphoserine pho 98.7 7.6E-08 1.7E-12 102.7 9.7 104 522-627 76-199 (212)
44 TIGR02726 phenyl_P_delta pheny 98.6 2E-07 4.3E-12 96.0 11.7 99 530-631 41-142 (169)
45 TIGR01487 SPP-like sucrose-pho 98.6 1.8E-07 3.8E-12 99.8 11.8 130 505-638 3-214 (215)
46 PRK09484 3-deoxy-D-manno-octul 98.6 2.7E-07 5.9E-12 96.2 12.5 109 530-643 55-172 (183)
47 PRK10513 sugar phosphate phosp 98.6 3.3E-07 7.2E-12 101.0 13.3 132 505-640 5-265 (270)
48 PRK13582 thrH phosphoserine ph 98.6 2.2E-07 4.9E-12 97.9 10.4 112 523-640 68-196 (205)
49 PRK01158 phosphoglycolate phos 98.6 3.4E-07 7.3E-12 98.3 11.8 131 505-640 5-226 (230)
50 PRK15126 thiamin pyrimidine py 98.5 5.1E-07 1.1E-11 99.9 11.4 132 505-640 4-259 (272)
51 COG0561 Cof Predicted hydrolas 98.5 6.1E-07 1.3E-11 98.7 11.4 132 505-641 5-259 (264)
52 PRK10976 putative hydrolase; P 98.5 8.8E-07 1.9E-11 97.5 12.2 132 505-640 4-261 (266)
53 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.5 6.9E-07 1.5E-11 93.5 9.9 99 523-624 80-200 (201)
54 PRK10530 pyridoxal phosphate ( 98.4 3.3E-06 7.1E-11 93.0 14.6 52 588-640 217-268 (272)
55 KOG1615 Phosphoserine phosphat 98.4 3.2E-07 7E-12 93.5 5.8 90 523-612 88-199 (227)
56 PLN02954 phosphoserine phospha 98.4 1.9E-06 4.1E-11 92.2 11.9 114 523-638 84-222 (224)
57 TIGR01482 SPP-subfamily Sucros 98.4 1.5E-06 3.3E-11 92.9 10.9 116 523-639 15-221 (225)
58 PF08282 Hydrolase_3: haloacid 98.4 2.5E-06 5.4E-11 91.6 11.5 117 522-639 14-254 (254)
59 COG1778 Low specificity phosph 98.3 3.9E-06 8.5E-11 83.2 10.1 114 530-648 42-164 (170)
60 TIGR00099 Cof-subfamily Cof su 98.3 4.2E-06 9.2E-11 91.6 11.3 127 508-638 4-255 (256)
61 PLN02887 hydrolase family prot 98.3 6.5E-06 1.4E-10 99.8 13.1 52 588-640 525-576 (580)
62 TIGR03333 salvage_mtnX 2-hydro 98.2 5.7E-06 1.2E-10 88.4 9.6 90 522-612 69-182 (214)
63 PF12710 HAD: haloacid dehalog 98.2 3.3E-06 7.3E-11 87.6 7.5 78 526-603 92-192 (192)
64 COG0546 Gph Predicted phosphat 98.1 1.8E-05 3.9E-10 85.0 11.1 118 521-640 87-218 (220)
65 TIGR01488 HAD-SF-IB Haloacid D 98.1 7.1E-06 1.5E-10 84.2 7.7 80 524-605 74-177 (177)
66 PRK13222 phosphoglycolate phos 98.1 2.1E-05 4.5E-10 84.1 11.0 119 522-642 92-224 (226)
67 TIGR01489 DKMTPPase-SF 2,3-dik 98.1 9.2E-06 2E-10 84.0 7.9 89 522-610 71-186 (188)
68 PRK09552 mtnX 2-hydroxy-3-keto 98.0 1.1E-05 2.4E-10 86.4 8.4 88 523-611 74-185 (219)
69 PRK08238 hypothetical protein; 98.0 0.00011 2.3E-09 87.7 17.4 119 523-643 72-199 (479)
70 TIGR01490 HAD-SF-IB-hyp1 HAD-s 98.0 1.7E-05 3.7E-10 83.4 9.0 90 521-612 85-197 (202)
71 TIGR01454 AHBA_synth_RP 3-amin 97.9 7.1E-05 1.5E-09 79.1 10.6 116 523-640 75-204 (205)
72 PRK03669 mannosyl-3-phosphogly 97.9 9.8E-05 2.1E-09 81.8 11.7 59 502-563 6-64 (271)
73 KOG0207 Cation transport ATPas 97.8 0.00021 4.5E-09 87.8 15.0 70 10-79 69-138 (951)
74 PRK00192 mannosyl-3-phosphogly 97.8 0.00017 3.7E-09 80.0 12.2 57 504-563 5-61 (273)
75 cd01427 HAD_like Haloacid deha 97.8 0.0001 2.2E-09 70.8 9.2 91 520-610 21-138 (139)
76 PRK13288 pyrophosphatase PpaX; 97.8 0.00014 3E-09 77.5 10.4 115 523-639 82-210 (214)
77 TIGR01486 HAD-SF-IIB-MPGP mann 97.7 0.00022 4.8E-09 78.2 11.3 52 588-640 196-253 (256)
78 KOG4383 Uncharacterized conser 97.6 0.00047 1E-08 81.2 13.0 207 511-717 814-1158(1354)
79 PRK13223 phosphoglycolate phos 97.6 0.00027 5.9E-09 78.5 10.5 117 522-640 100-230 (272)
80 TIGR02471 sucr_syn_bact_C sucr 97.6 0.00035 7.5E-09 75.7 10.6 65 575-640 159-232 (236)
81 PRK10826 2-deoxyglucose-6-phos 97.5 0.00032 7E-09 75.1 9.6 111 522-636 91-216 (222)
82 TIGR01449 PGP_bact 2-phosphogl 97.5 0.0003 6.5E-09 74.4 9.2 112 523-637 85-211 (213)
83 PRK13225 phosphoglycolate phos 97.5 0.00076 1.6E-08 75.0 11.8 113 523-639 142-267 (273)
84 PRK06769 hypothetical protein; 97.4 0.00073 1.6E-08 69.9 9.4 108 502-611 3-136 (173)
85 PRK13226 phosphoglycolate phos 97.4 0.00097 2.1E-08 72.0 10.6 116 523-640 95-225 (229)
86 TIGR01544 HAD-SF-IE haloacid d 97.3 0.0024 5.3E-08 70.7 12.5 118 523-640 121-274 (277)
87 TIGR03351 PhnX-like phosphonat 97.2 0.0018 3.9E-08 69.1 10.8 115 522-639 86-219 (220)
88 TIGR01485 SPP_plant-cyano sucr 97.2 0.0016 3.4E-08 71.3 10.4 112 510-622 8-219 (249)
89 TIGR00003 copper ion binding p 97.2 0.0018 3.9E-08 52.6 8.2 65 10-74 2-66 (68)
90 PRK10187 trehalose-6-phosphate 97.2 0.0013 2.8E-08 72.9 9.2 131 503-640 14-241 (266)
91 TIGR01422 phosphonatase phosph 97.2 0.0016 3.6E-08 71.2 9.6 84 523-607 99-195 (253)
92 PLN02770 haloacid dehalogenase 97.1 0.0024 5.3E-08 69.8 10.8 110 523-634 108-230 (248)
93 PRK08942 D,D-heptose 1,7-bisph 97.1 0.0043 9.4E-08 64.4 11.5 115 523-640 29-177 (181)
94 PRK11009 aphA acid phosphatase 97.0 0.0013 2.8E-08 71.6 7.2 86 523-611 114-210 (237)
95 TIGR01672 AphA HAD superfamily 97.0 0.0014 2.9E-08 71.4 7.0 84 524-607 115-205 (237)
96 PLN03243 haloacid dehalogenase 97.0 0.004 8.7E-08 68.8 10.8 112 523-637 109-232 (260)
97 PRK13478 phosphonoacetaldehyde 97.0 0.0035 7.5E-08 69.3 10.3 115 523-640 101-255 (267)
98 PLN02382 probable sucrose-phos 96.9 0.0065 1.4E-07 71.6 12.4 64 576-640 176-257 (413)
99 PRK06698 bifunctional 5'-methy 96.9 0.004 8.6E-08 74.4 10.6 117 523-641 330-455 (459)
100 PRK11587 putative phosphatase; 96.9 0.0054 1.2E-07 65.6 10.4 110 523-635 83-203 (218)
101 TIGR01662 HAD-SF-IIIA HAD-supe 96.8 0.0091 2E-07 58.5 10.3 102 506-607 3-125 (132)
102 COG4030 Uncharacterized protei 96.8 0.0098 2.1E-07 62.6 10.6 116 523-641 83-263 (315)
103 PRK12702 mannosyl-3-phosphogly 96.8 0.009 1.9E-07 66.4 10.9 56 505-563 3-58 (302)
104 TIGR01548 HAD-SF-IA-hyp1 haloa 96.7 0.0042 9E-08 65.3 8.0 85 521-605 104-197 (197)
105 PLN02575 haloacid dehalogenase 96.7 0.01 2.3E-07 68.6 11.2 111 523-636 216-338 (381)
106 TIGR02253 CTE7 HAD superfamily 96.6 0.0072 1.6E-07 64.3 9.1 89 523-612 94-195 (221)
107 TIGR02461 osmo_MPG_phos mannos 96.6 0.009 2E-07 64.6 9.8 52 508-563 4-55 (225)
108 TIGR01545 YfhB_g-proteo haloac 96.5 0.012 2.7E-07 62.8 10.0 90 523-612 94-201 (210)
109 PRK11590 hypothetical protein; 96.5 0.015 3.2E-07 62.1 10.6 90 523-612 95-202 (211)
110 TIGR00213 GmhB_yaeD D,D-heptos 96.5 0.014 3E-07 60.4 10.0 128 505-636 3-175 (176)
111 PLN02957 copper, zinc superoxi 96.5 0.0096 2.1E-07 64.9 8.9 68 10-81 6-73 (238)
112 TIGR01668 YqeG_hyp_ppase HAD s 96.5 0.014 3E-07 60.2 9.4 102 501-607 23-130 (170)
113 PHA02530 pseT polynucleotide k 96.4 0.012 2.6E-07 66.0 9.6 89 520-608 184-291 (300)
114 PRK10671 copA copper exporting 96.4 0.0055 1.2E-07 78.6 7.6 63 10-77 3-65 (834)
115 TIGR01428 HAD_type_II 2-haloal 96.4 0.0092 2E-07 62.6 7.8 85 523-608 92-187 (198)
116 TIGR01685 MDP-1 magnesium-depe 96.3 0.015 3.2E-07 60.4 8.9 93 518-610 40-154 (174)
117 TIGR02254 YjjG/YfnB HAD superf 96.3 0.012 2.5E-07 62.7 8.2 112 523-638 97-223 (224)
118 TIGR01484 HAD-SF-IIB HAD-super 96.2 0.015 3.1E-07 61.4 8.3 50 508-561 4-55 (204)
119 PF13419 HAD_2: Haloacid dehal 96.2 0.015 3.3E-07 58.4 8.1 87 522-608 76-172 (176)
120 TIGR01990 bPGM beta-phosphoglu 96.2 0.013 2.8E-07 60.4 7.4 83 523-608 87-180 (185)
121 PRK14502 bifunctional mannosyl 96.1 0.024 5.2E-07 69.5 10.5 56 504-562 417-472 (694)
122 PRK09449 dUMP phosphatase; Pro 96.1 0.022 4.8E-07 60.9 9.2 114 523-639 95-222 (224)
123 PRK14988 GMP/IMP nucleotidase; 96.1 0.014 3.1E-07 62.8 7.6 86 523-608 93-188 (224)
124 PLN02779 haloacid dehalogenase 96.1 0.025 5.4E-07 63.4 9.6 112 523-636 144-269 (286)
125 TIGR01509 HAD-SF-IA-v3 haloaci 95.9 0.028 6.1E-07 57.6 8.4 84 523-607 85-178 (183)
126 PLN02940 riboflavin kinase 95.9 0.023 5E-07 66.3 8.4 103 523-627 93-210 (382)
127 COG4359 Uncharacterized conser 95.7 0.027 5.7E-07 57.9 6.8 89 523-611 73-184 (220)
128 TIGR02009 PGMB-YQAB-SF beta-ph 95.7 0.022 4.8E-07 58.7 6.6 84 522-608 87-181 (185)
129 KOG4656 Copper chaperone for s 95.6 0.021 4.6E-07 59.1 5.9 68 11-82 8-75 (247)
130 PRK14501 putative bifunctional 95.6 0.039 8.6E-07 69.8 9.8 132 502-640 491-721 (726)
131 COG2179 Predicted hydrolase of 95.6 0.046 9.9E-07 55.6 8.1 106 497-607 22-132 (175)
132 smart00577 CPDc catalytic doma 95.6 0.015 3.2E-07 58.6 4.8 89 521-610 43-139 (148)
133 TIGR01656 Histidinol-ppas hist 95.5 0.051 1.1E-06 54.5 8.5 86 523-608 27-140 (147)
134 PLN02811 hydrolase 95.5 0.042 9.1E-07 58.9 8.1 86 523-608 78-179 (220)
135 TIGR01459 HAD-SF-IIA-hyp4 HAD- 95.2 0.094 2E-06 57.1 9.7 90 516-606 17-115 (242)
136 KOG1603 Copper chaperone [Inor 95.2 0.076 1.7E-06 47.0 7.3 58 12-72 6-63 (73)
137 TIGR01261 hisB_Nterm histidino 95.1 0.076 1.6E-06 54.4 8.2 89 523-611 29-146 (161)
138 TIGR01549 HAD-SF-IA-v1 haloaci 95.1 0.071 1.5E-06 53.4 7.9 84 523-606 64-154 (154)
139 TIGR01664 DNA-3'-Pase DNA 3'-p 95.1 0.12 2.6E-06 53.3 9.6 105 504-608 14-157 (166)
140 PF06888 Put_Phosphatase: Puta 94.8 0.062 1.3E-06 58.4 6.9 87 523-609 71-195 (234)
141 TIGR02252 DREG-2 REG-2-like, H 94.8 0.074 1.6E-06 55.9 7.4 83 523-607 105-199 (203)
142 smart00775 LNS2 LNS2 domain. T 94.8 0.24 5.3E-06 50.5 10.7 87 521-607 25-140 (157)
143 TIGR01686 FkbH FkbH-like domai 94.5 0.1 2.2E-06 59.5 7.9 89 523-611 31-128 (320)
144 PRK05446 imidazole glycerol-ph 94.3 0.15 3.3E-06 58.7 8.8 87 522-608 29-143 (354)
145 PLN02919 haloacid dehalogenase 94.2 0.14 2.9E-06 67.4 9.3 109 524-635 162-285 (1057)
146 TIGR01533 lipo_e_P4 5'-nucleot 94.1 0.17 3.6E-06 56.2 8.4 80 523-602 118-204 (266)
147 TIGR01675 plant-AP plant acid 94.1 0.18 3.9E-06 54.6 8.4 78 523-600 120-210 (229)
148 PLN02580 trehalose-phosphatase 93.8 0.28 6E-06 57.1 9.9 66 570-640 293-374 (384)
149 COG3769 Predicted hydrolase (H 93.8 0.4 8.7E-06 50.8 9.8 56 504-563 8-63 (274)
150 TIGR01691 enolase-ppase 2,3-di 93.7 0.28 6.2E-06 52.9 9.0 89 520-608 92-191 (220)
151 TIGR01681 HAD-SF-IIIC HAD-supe 93.7 0.21 4.5E-06 49.1 7.4 82 523-604 29-126 (128)
152 TIGR02463 MPGP_rel mannosyl-3- 93.6 0.15 3.2E-06 54.5 6.8 37 575-611 179-220 (221)
153 PF09419 PGP_phosphatase: Mito 93.4 0.26 5.6E-06 50.9 7.8 104 498-605 36-156 (168)
154 TIGR01458 HAD-SF-IIA-hyp3 HAD- 93.4 0.58 1.3E-05 51.6 11.1 48 516-563 10-64 (257)
155 PRK10444 UMP phosphatase; Prov 92.8 0.64 1.4E-05 51.1 10.3 45 516-560 10-54 (248)
156 TIGR02247 HAD-1A3-hyp Epoxide 92.6 0.15 3.3E-06 53.9 5.0 89 522-611 93-195 (211)
157 TIGR00685 T6PP trehalose-phosp 92.6 0.24 5.2E-06 54.1 6.5 70 566-640 158-240 (244)
158 PHA02597 30.2 hypothetical pro 91.9 0.37 8.1E-06 50.4 6.9 84 523-608 74-169 (197)
159 PF05116 S6PP: Sucrose-6F-phos 91.7 0.39 8.4E-06 52.7 7.0 44 574-618 164-212 (247)
160 KOG3120 Predicted haloacid deh 91.2 0.29 6.3E-06 52.0 4.9 88 523-612 84-209 (256)
161 PLN02645 phosphoglycolate phos 91.0 0.52 1.1E-05 53.5 7.2 96 505-609 30-134 (311)
162 PLN03017 trehalose-phosphatase 90.7 1.5 3.3E-05 50.6 10.7 55 502-557 110-166 (366)
163 PRK09456 ?-D-glucose-1-phospha 90.5 0.5 1.1E-05 49.7 6.2 85 523-608 84-180 (199)
164 PF13344 Hydrolase_6: Haloacid 90.0 0.36 7.8E-06 45.5 4.0 86 516-607 7-100 (101)
165 PRK10563 6-phosphogluconate ph 90.0 0.81 1.8E-05 48.8 7.3 85 523-610 88-183 (221)
166 PRK10725 fructose-1-P/6-phosph 89.9 0.86 1.9E-05 47.1 7.2 82 525-608 90-181 (188)
167 PF03767 Acid_phosphat_B: HAD 89.5 0.62 1.3E-05 50.6 5.9 79 523-601 115-207 (229)
168 PLN02205 alpha,alpha-trehalose 89.5 1.3 2.9E-05 56.8 9.8 58 501-558 594-652 (854)
169 PRK14054 methionine sulfoxide 88.8 1.1 2.4E-05 46.4 6.9 50 22-71 10-78 (172)
170 TIGR01993 Pyr-5-nucltdase pyri 88.7 0.9 2E-05 47.0 6.3 82 523-608 84-180 (184)
171 TIGR01452 PGP_euk phosphoglyco 87.9 17 0.00037 40.5 16.2 85 525-611 145-246 (279)
172 KOG3040 Predicted sugar phosph 87.7 2.4 5.3E-05 44.8 8.5 51 514-564 14-67 (262)
173 TIGR01457 HAD-SF-IIA-hyp2 HAD- 87.7 2.8 6.1E-05 46.0 9.6 46 518-563 12-60 (249)
174 PTZ00174 phosphomannomutase; P 87.1 0.47 1E-05 51.9 3.2 54 570-624 181-242 (247)
175 PRK00058 methionine sulfoxide 86.8 1.5 3.3E-05 46.9 6.6 50 22-71 52-120 (213)
176 PRK10748 flavin mononucleotide 86.5 1.7 3.7E-05 47.2 7.1 78 523-608 113-203 (238)
177 TIGR02251 HIF-SF_euk Dullard-l 86.0 0.54 1.2E-05 48.2 2.7 88 519-607 38-133 (162)
178 TIGR02052 MerP mercuric transp 85.7 4.9 0.00011 35.4 8.6 64 11-74 24-87 (92)
179 TIGR01663 PNK-3'Pase polynucle 84.8 3.5 7.6E-05 50.2 9.2 101 504-604 169-302 (526)
180 COG1011 Predicted hydrolase (H 83.4 7.6 0.00016 41.2 10.3 114 523-640 99-227 (229)
181 PRK13014 methionine sulfoxide 83.0 2.4 5.2E-05 44.5 5.9 58 8-71 7-83 (186)
182 KOG4383 Uncharacterized conser 82.9 4.3 9.4E-05 49.2 8.5 36 202-237 161-198 (1354)
183 PRK05528 methionine sulfoxide 81.7 2.8 6E-05 42.8 5.7 50 22-71 8-71 (156)
184 TIGR01452 PGP_euk phosphoglyco 81.6 11 0.00024 42.0 11.0 95 506-610 5-108 (279)
185 COG0225 MsrA Peptide methionin 81.3 3.9 8.4E-05 42.2 6.5 58 8-71 5-81 (174)
186 COG0647 NagD Predicted sugar p 80.3 9.5 0.00021 42.5 9.7 108 515-631 16-130 (269)
187 TIGR01657 P-ATPase-V P-type AT 79.9 66 0.0014 43.0 19.0 223 165-411 195-455 (1054)
188 COG0637 Predicted phosphatase/ 79.5 5.6 0.00012 42.8 7.5 85 522-608 85-181 (221)
189 PLN02151 trehalose-phosphatase 79.3 7.4 0.00016 45.0 8.7 55 502-557 97-153 (354)
190 TIGR01106 ATPase-IIC_X-K sodiu 79.2 54 0.0012 43.5 17.8 221 167-409 108-349 (997)
191 TIGR01680 Veg_Stor_Prot vegeta 79.0 8.3 0.00018 42.9 8.6 77 522-599 144-235 (275)
192 TIGR01684 viral_ppase viral ph 77.2 4.6 9.9E-05 45.4 6.0 57 504-563 127-186 (301)
193 PF08235 LNS2: LNS2 (Lipin/Ned 76.5 8.2 0.00018 39.5 7.2 86 522-607 26-140 (157)
194 PF01625 PMSR: Peptide methion 76.1 6 0.00013 40.4 6.1 50 22-71 7-75 (155)
195 TIGR01647 ATPase-IIIA_H plasma 74.8 28 0.00061 44.6 13.1 181 214-407 98-289 (755)
196 COG0241 HisB Histidinol phosph 74.3 7.4 0.00016 40.8 6.3 85 524-608 32-144 (181)
197 PLN02177 glycerol-3-phosphate 74.1 77 0.0017 38.6 15.8 84 524-613 111-215 (497)
198 TIGR01493 HAD-SF-IA-v2 Haloaci 72.3 3.9 8.5E-05 41.7 3.8 76 523-605 90-175 (175)
199 TIGR00401 msrA methionine-S-su 72.1 7.8 0.00017 39.4 5.7 50 22-71 7-75 (149)
200 TIGR02463 MPGP_rel mannosyl-3- 71.1 7.6 0.00016 41.3 5.8 38 526-563 19-56 (221)
201 PRK11033 zntA zinc/cadmium/mer 70.1 2.1E+02 0.0045 36.7 19.2 115 214-329 249-373 (741)
202 PHA03398 viral phosphatase sup 68.2 8 0.00017 43.5 5.3 57 504-563 129-188 (303)
203 cd00371 HMA Heavy-metal-associ 67.8 30 0.00066 24.8 7.2 42 15-56 3-44 (63)
204 PRK05550 bifunctional methioni 67.0 8.4 0.00018 43.1 5.1 50 22-71 134-202 (283)
205 KOG0208 Cation transport ATPas 65.3 1.8E+02 0.0038 38.0 16.3 191 208-412 250-476 (1140)
206 PTZ00174 phosphomannomutase; P 64.3 33 0.00072 37.4 9.2 80 504-586 6-106 (247)
207 COG3700 AphA Acid phosphatase 64.1 6.4 0.00014 40.7 3.2 88 524-611 115-210 (237)
208 PF05822 UMPH-1: Pyrimidine 5' 62.8 35 0.00076 37.5 8.8 117 523-639 90-241 (246)
209 PF00122 E1-E2_ATPase: E1-E2 A 62.5 73 0.0016 34.0 11.3 157 212-370 38-212 (230)
210 PF00389 2-Hacid_dh: D-isomer 60.8 48 0.001 32.4 8.8 87 518-612 1-89 (133)
211 TIGR01456 CECR5 HAD-superfamil 57.9 36 0.00079 38.8 8.4 85 516-606 9-104 (321)
212 PF13242 Hydrolase_like: HAD-h 56.3 25 0.00054 30.8 5.3 55 577-634 11-74 (75)
213 PRK14194 bifunctional 5,10-met 56.1 58 0.0013 37.0 9.4 43 521-563 13-64 (301)
214 PRK10517 magnesium-transportin 56.0 4.4E+02 0.0095 34.8 18.6 180 216-409 173-376 (902)
215 TIGR01511 ATPase-IB1_Cu copper 55.0 4.1E+02 0.0089 32.9 17.4 106 526-676 453-561 (562)
216 PF12689 Acid_PPase: Acid Phos 53.9 41 0.00088 34.9 7.1 85 524-610 46-146 (169)
217 smart00831 Cation_ATPase_N Cat 53.4 12 0.00027 31.7 2.8 49 68-124 11-59 (64)
218 TIGR02244 HAD-IG-Ncltidse HAD 52.7 43 0.00092 38.8 7.8 37 525-561 186-223 (343)
219 PRK13748 putative mercuric red 51.9 44 0.00096 41.0 8.4 64 13-77 3-66 (561)
220 PF00690 Cation_ATPase_N: Cati 51.8 12 0.00026 32.5 2.4 56 60-123 5-68 (69)
221 PRK14018 trifunctional thiored 50.7 32 0.0007 42.0 6.7 50 22-71 205-272 (521)
222 TIGR01524 ATPase-IIIB_Mg magne 47.9 5.5E+02 0.012 33.7 17.7 180 216-409 139-341 (867)
223 PRK14179 bifunctional 5,10-met 47.4 1.2E+02 0.0026 34.2 10.1 62 568-629 137-208 (284)
224 TIGR02250 FCP1_euk FCP1-like p 47.3 42 0.0009 34.3 6.0 42 521-563 56-97 (156)
225 TIGR01116 ATPase-IIA1_Ca sarco 46.8 4.5E+02 0.0098 34.7 16.7 222 165-407 38-292 (917)
226 PF00875 DNA_photolyase: DNA p 46.4 92 0.002 31.6 8.4 74 528-603 55-135 (165)
227 PRK15122 magnesium-transportin 45.1 2.4E+02 0.0052 37.1 13.8 35 216-250 162-198 (903)
228 PLN02423 phosphomannomutase 45.0 30 0.00065 37.9 4.9 39 574-612 188-231 (245)
229 PRK05585 yajC preprotein trans 44.5 1E+02 0.0022 29.5 7.7 27 179-205 37-64 (106)
230 PRK03692 putative UDP-N-acetyl 44.3 1.3E+02 0.0028 33.1 9.6 115 529-647 95-227 (243)
231 KOG1635 Peptide methionine sul 44.0 43 0.00092 34.6 5.2 50 22-71 31-99 (191)
232 PRK14170 bifunctional 5,10-met 43.5 1.4E+02 0.0031 33.6 9.9 43 521-563 11-62 (284)
233 TIGR01460 HAD-SF-IIA Haloacid 43.3 75 0.0016 34.5 7.6 84 516-607 7-101 (236)
234 TIGR01501 MthylAspMutase methy 43.3 96 0.0021 31.0 7.6 70 511-584 52-129 (134)
235 TIGR01689 EcbF-BcbF capsule bi 43.1 58 0.0012 32.2 6.0 33 522-554 23-55 (126)
236 PRK14169 bifunctional 5,10-met 41.7 1.7E+02 0.0038 32.9 10.1 43 521-563 10-61 (282)
237 cd02071 MM_CoA_mut_B12_BD meth 40.9 80 0.0017 30.6 6.6 68 511-580 50-120 (122)
238 PF06506 PrpR_N: Propionate ca 40.6 1.3E+02 0.0027 31.2 8.5 107 527-651 65-172 (176)
239 PRK14010 potassium-transportin 40.4 2.5E+02 0.0054 35.7 12.3 223 161-407 63-301 (673)
240 PF11491 DUF3213: Protein of u 40.0 43 0.00094 30.4 4.0 56 22-77 10-65 (88)
241 PRK02261 methylaspartate mutas 39.9 1.4E+02 0.003 29.8 8.3 69 511-581 54-131 (137)
242 TIGR01494 ATPase_P-type ATPase 39.8 1.1E+02 0.0024 37.0 9.2 55 206-268 58-113 (499)
243 TIGR01522 ATPase-IIA2_Ca golgi 39.7 6.5E+02 0.014 33.1 16.5 17 206-222 141-157 (884)
244 TIGR01525 ATPase-IB_hvy heavy 39.5 5.1E+02 0.011 32.0 14.9 18 217-234 65-82 (556)
245 COG1877 OtsB Trehalose-6-phosp 38.6 2E+02 0.0043 32.2 10.0 65 498-562 13-80 (266)
246 PF13380 CoA_binding_2: CoA bi 38.2 36 0.00077 32.9 3.7 40 524-563 64-104 (116)
247 COG0474 MgtA Cation transport 38.2 3.2E+02 0.0069 36.1 13.4 255 75-364 52-328 (917)
248 PRK14188 bifunctional 5,10-met 37.5 1.5E+02 0.0032 33.7 8.9 42 522-563 12-63 (296)
249 PRK01122 potassium-transportin 36.9 8.3E+02 0.018 31.2 16.2 82 160-248 62-147 (679)
250 PRK14189 bifunctional 5,10-met 36.8 1.5E+02 0.0033 33.4 8.8 63 568-630 137-209 (285)
251 TIGR00640 acid_CoA_mut_C methy 36.2 4.1E+02 0.0088 26.3 10.8 96 514-612 6-111 (132)
252 KOG1250 Threonine/serine dehyd 35.9 87 0.0019 36.7 6.7 85 511-603 89-177 (457)
253 TIGR00262 trpA tryptophan synt 35.7 2.7E+02 0.0058 30.8 10.5 91 519-612 120-227 (256)
254 COG2177 FtsX Cell division pro 35.6 7.1E+02 0.015 28.3 16.6 49 22-71 71-143 (297)
255 PRK04302 triosephosphate isome 35.5 3.5E+02 0.0075 29.1 11.2 85 524-612 99-202 (223)
256 PRK10019 nickel/cobalt efflux 35.4 1.4E+02 0.003 33.6 8.1 22 679-700 89-110 (279)
257 PRK14172 bifunctional 5,10-met 35.0 2.3E+02 0.005 31.9 9.8 62 568-629 137-208 (278)
258 TIGR01512 ATPase-IB2_Cd heavy 34.8 6E+02 0.013 31.2 14.4 146 206-365 79-227 (536)
259 COG1862 YajC Preprotein transl 34.5 94 0.002 29.4 5.6 17 177-193 26-42 (97)
260 TIGR01459 HAD-SF-IIA-hyp4 HAD- 33.1 32 0.0007 37.3 2.8 82 525-608 140-236 (242)
261 PF01206 TusA: Sulfurtransfera 33.0 1.4E+02 0.0029 25.8 6.2 56 12-77 1-56 (70)
262 PF00763 THF_DHG_CYH: Tetrahyd 32.6 77 0.0017 30.7 5.0 66 521-586 9-85 (117)
263 CHL00200 trpA tryptophan synth 32.6 3.2E+02 0.0069 30.5 10.4 81 518-600 123-215 (263)
264 PRK13670 hypothetical protein; 32.4 2.8E+02 0.0062 32.7 10.5 91 513-603 2-111 (388)
265 cd00958 DhnA Class I fructose- 31.7 1.5E+02 0.0032 32.0 7.6 87 522-612 105-214 (235)
266 PRK05886 yajC preprotein trans 31.2 2.5E+02 0.0054 27.2 7.9 25 181-205 25-50 (109)
267 PF11694 DUF3290: Protein of u 30.2 4.9E+02 0.011 26.5 10.4 19 204-222 97-115 (149)
268 cd00532 MGS-like MGS-like doma 30.2 2.1E+02 0.0046 27.2 7.5 74 517-597 3-80 (112)
269 PLN02591 tryptophan synthase 30.0 4E+02 0.0086 29.5 10.5 86 516-604 109-209 (250)
270 TIGR00696 wecB_tagA_cpsF bacte 29.9 2.5E+02 0.0054 29.4 8.5 118 528-647 37-170 (177)
271 TIGR00603 rad25 DNA repair hel 29.6 2.3E+02 0.0051 36.2 9.6 59 531-592 488-548 (732)
272 PTZ00445 p36-lilke protein; Pr 29.5 97 0.0021 33.4 5.4 69 523-592 26-97 (219)
273 cd04728 ThiG Thiazole synthase 29.3 4.4E+02 0.0095 29.2 10.4 77 522-600 103-188 (248)
274 COG1888 Uncharacterized protei 29.2 2.5E+02 0.0054 26.2 7.1 66 8-73 4-74 (97)
275 cd01994 Alpha_ANH_like_IV This 29.0 2.4E+02 0.0052 29.8 8.4 42 527-570 11-65 (194)
276 COG2217 ZntA Cation transport 28.4 1.4E+03 0.03 29.4 18.1 149 218-367 222-380 (713)
277 cd00860 ThrRS_anticodon ThrRS 27.9 1.5E+02 0.0032 26.3 5.8 47 517-563 6-53 (91)
278 TIGR01523 ATPase-IID_K-Na pota 27.8 1.6E+03 0.035 30.1 18.0 77 168-252 86-164 (1053)
279 cd06167 LabA_like LabA_like pr 27.4 1.7E+02 0.0036 28.9 6.6 29 575-603 111-140 (149)
280 TIGR02765 crypto_DASH cryptoch 27.3 1.7E+02 0.0038 34.7 7.8 71 526-598 61-138 (429)
281 PRK14178 bifunctional 5,10-met 27.3 2.6E+02 0.0057 31.5 8.6 61 568-629 131-202 (279)
282 PRK13125 trpA tryptophan synth 26.2 5.9E+02 0.013 27.8 11.1 85 526-612 116-214 (244)
283 KOG2882 p-Nitrophenyl phosphat 26.2 5.8E+02 0.013 29.1 10.9 81 526-608 168-264 (306)
284 PF02699 YajC: Preprotein tran 25.8 1E+02 0.0022 28.1 4.1 13 212-224 36-48 (82)
285 PF02680 DUF211: Uncharacteriz 25.7 2.4E+02 0.0051 26.6 6.5 66 8-74 3-73 (95)
286 COG4129 Predicted membrane pro 25.5 1.8E+02 0.0038 33.6 7.1 55 107-161 28-82 (332)
287 PRK14175 bifunctional 5,10-met 25.5 1.4E+02 0.003 33.7 6.1 43 521-563 12-63 (286)
288 PRK09479 glpX fructose 1,6-bis 25.4 1.2E+02 0.0027 34.4 5.5 82 520-603 163-282 (319)
289 COG3981 Predicted acetyltransf 25.4 2.1E+02 0.0046 29.8 6.7 60 504-563 70-156 (174)
290 PRK14167 bifunctional 5,10-met 24.9 1.5E+02 0.0032 33.7 6.2 43 521-563 11-62 (297)
291 COG1171 IlvA Threonine dehydra 24.3 1.2E+02 0.0027 35.0 5.5 56 546-604 82-138 (347)
292 PRK15424 propionate catabolism 24.1 6.3E+02 0.014 31.3 11.8 70 527-597 95-165 (538)
293 PF02358 Trehalose_PPase: Treh 24.1 1.3E+02 0.0029 32.4 5.6 59 570-628 160-232 (235)
294 TIGR01517 ATPase-IIB_Ca plasma 24.1 4E+02 0.0086 35.3 10.9 73 214-286 172-254 (941)
295 cd06279 PBP1_LacI_like_3 Ligan 24.0 3.4E+02 0.0073 29.6 8.9 70 522-595 16-88 (283)
296 cd01573 modD_like ModD; Quinol 23.8 5.5E+02 0.012 28.7 10.4 80 529-612 171-258 (272)
297 COG0078 ArgF Ornithine carbamo 23.6 3.1E+02 0.0067 31.3 8.2 67 527-597 88-164 (310)
298 cd02072 Glm_B12_BD B12 binding 23.4 2.8E+02 0.006 27.5 7.0 60 511-572 50-117 (128)
299 PRK14192 bifunctional 5,10-met 22.8 2E+02 0.0043 32.5 6.7 67 520-586 11-89 (283)
300 PRK05265 pyridoxine 5'-phospha 22.8 2.5E+02 0.0053 30.9 7.0 38 525-563 112-149 (239)
301 PF12710 HAD: haloacid dehalog 22.8 42 0.00091 34.3 1.3 13 391-403 1-13 (192)
302 cd01516 FBPase_glpX Bacterial 22.8 1.6E+02 0.0034 33.4 5.7 79 525-603 163-279 (309)
303 PRK00208 thiG thiazole synthas 22.6 7.3E+02 0.016 27.5 10.6 74 522-599 103-187 (250)
304 COG1188 Ribosome-associated he 22.6 2E+02 0.0044 27.3 5.5 28 200-227 35-63 (100)
305 TIGR00739 yajC preprotein tran 22.5 3.4E+02 0.0074 24.8 7.0 23 183-205 26-49 (84)
306 cd05017 SIS_PGI_PMI_1 The memb 22.5 1.5E+02 0.0034 28.3 5.1 38 524-563 55-92 (119)
307 PF06738 DUF1212: Protein of u 22.5 4.8E+02 0.011 27.1 9.3 34 21-54 8-44 (193)
308 PRK09459 pspG phage shock prot 22.3 3.1E+02 0.0067 24.7 6.2 36 675-710 40-75 (76)
309 cd04724 Tryptophan_synthase_al 22.2 5.4E+02 0.012 28.1 9.8 76 522-599 112-199 (242)
310 PRK14191 bifunctional 5,10-met 22.1 1.8E+02 0.0038 32.9 6.1 62 568-630 136-208 (285)
311 PRK14182 bifunctional 5,10-met 21.9 1.9E+02 0.0042 32.6 6.3 66 521-586 10-86 (282)
312 cd01305 archeal_chlorohydrolas 21.8 4.1E+02 0.009 29.0 9.0 80 528-612 127-219 (263)
313 TIGR03679 arCOG00187 arCOG0018 21.7 4.5E+02 0.0097 28.3 8.9 43 528-572 10-65 (218)
314 KOG3085 Predicted hydrolase (H 21.6 1.9E+02 0.0042 31.7 6.1 86 525-612 115-213 (237)
315 cd04726 KGPDC_HPS 3-Keto-L-gul 21.6 5.5E+02 0.012 26.6 9.6 83 527-612 91-186 (202)
316 PF03129 HGTP_anticodon: Antic 21.6 2.2E+02 0.0048 25.7 5.7 48 516-563 3-54 (94)
317 KOG2882 p-Nitrophenyl phosphat 21.0 1.4E+02 0.003 33.8 4.9 86 516-608 31-127 (306)
318 PTZ00445 p36-lilke protein; Pr 21.0 62 0.0013 34.9 2.1 84 524-607 76-199 (219)
319 PRK13111 trpA tryptophan synth 20.7 9.7E+02 0.021 26.6 11.5 20 527-546 105-124 (258)
320 PRK12415 fructose 1,6-bisphosp 20.7 1.8E+02 0.004 33.2 5.7 80 525-604 164-281 (322)
321 PF01729 QRPTase_C: Quinolinat 20.5 6.2E+02 0.013 26.2 9.3 83 527-612 65-155 (169)
322 COG2966 Uncharacterized conser 20.5 8E+02 0.017 27.2 10.6 32 24-55 32-66 (250)
323 PRK07428 nicotinate-nucleotide 20.4 7.3E+02 0.016 28.1 10.5 96 527-627 181-284 (288)
324 PRK14190 bifunctional 5,10-met 20.1 2E+02 0.0044 32.4 6.0 43 521-563 12-63 (284)
No 1
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.5e-123 Score=1115.57 Aligned_cols=679 Identities=37% Similarity=0.593 Sum_probs=613.9
Q ss_pred eEEEEEecCCCCchHHHHHHHHHhCCCCeeEEEEecCCCeEEEEEcCCccc-HHHHHHHhhhcccccccccccc--cccc
Q 001837 10 QKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLIS-QHQIVKALNQARFEANVRAYGG--TSYQ 86 (1007)
Q Consensus 10 ~~~~l~V~Gm~C~~Ca~~IE~~L~~l~GV~~v~Vn~~t~tv~V~~D~~~~s-~~~I~~aL~~aGy~as~~~~g~--~~~~ 86 (1007)
.+..+.|+||+|++|+++|| .|++++||.++++|+.++++.+.||+...+ .+++.+.++..||.+....... ....
T Consensus 2 ~~~~l~v~Gm~Ca~C~~~ie-~l~~~~gV~~~~vn~~t~~~~v~~~~~~~~~~~~~~~~v~~~gy~~~~~~~~~~~~~~~ 80 (713)
T COG2217 2 RETSLSVEGMTCAACASRIE-ALNKLPGVEEARVNLATERATVVYDPEEVDLPADIVAAVEKAGYSARLTAALADPAEAE 80 (713)
T ss_pred ceeEEeecCcCcHHHHHHHH-HHhcCCCeeEEEeecccceEEEEecccccccHHHHHHHHHhcCccccccccccchhhhh
Confidence 35689999999999999999 999999999999999999999999987666 7899999999999876511110 0000
Q ss_pred c---CCCchHHHHHHHHHHHHH----HHHhh----hhH-HHHHHHhhhhchHHHHHHHHHHHHcCcccHHHHHHHHHHHH
Q 001837 87 K---KWPSPYAMACGVLLAISI----LKYVY----HPL-RWFALGAVAIGIFPIILKGLAAIRNFKLDINILVLIAVIGT 154 (1007)
Q Consensus 87 ~---~~~~~~~~~~gill~isl----~~~~~----~~l-~~l~l~~~~~~~~p~~~~a~~~l~~~~l~i~~Li~ia~~~~ 154 (1007)
. .+......+.+++.+..+ ..++. .++ .++++++++++++|||+.+|+.++++.++||+|+.++++++
T Consensus 81 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~g~~f~~~a~~~l~~~~~~md~Lv~la~~~A 160 (713)
T COG2217 81 ARLLRELLRRLIIAGLLTLPLLLLSLGLLLGAFLLPWVSFLLATPVLFYGGWPFYRGAWRALRRGRLNMDTLVALATIGA 160 (713)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCChHHHHHHHHHHH
Confidence 0 001111222222221111 11111 112 23456778899999999999999999999999999999999
Q ss_pred HhhhhH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcceEEec-CC--EEeeCCCcccCcEEEEeC
Q 001837 155 IAMNDY--------IEAGIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAIIAG-TG--EEVDAGEVKLNTVLAVKA 223 (1007)
Q Consensus 155 ~~~~~y--------~~a~~Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~~~~V~r-dg--~~V~~~dLv~GDIV~L~~ 223 (1007)
++++.| .+++++++++++++++|.+++.|+.+.++.|+++.|.++++++ || ++||+++|++||+|+|+|
T Consensus 161 ~~~s~~~~~~~~yf~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~Vrp 240 (713)
T COG2217 161 YAYSLYATLFPVYFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRP 240 (713)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECC
Confidence 999988 8889999999999999999999999999999999999996665 55 899999999999999999
Q ss_pred CCcccccEEEEeceeeeecccCCCCCeeeEecCCCeeeeceEEeeeeEEEEEEEEecceEEehhHHHHHHhhccchHHHH
Q 001837 224 GEVIPIDGIVVDGKCEVDEKTLTGESYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQR 303 (1007)
Q Consensus 224 Ge~VPaDgiVl~G~~~VDES~LTGES~Pv~K~~g~~V~aGT~v~~G~~~~~V~~tG~~T~~gki~~lv~~a~~~ks~lq~ 303 (1007)
||+||+||+|++|+..||||+|||||.|+.|.+|+.|++||+|.+|.++++|+++|.+|.+++|.+++++++.+|+|+|+
T Consensus 241 GE~IPvDG~V~~G~s~vDeS~iTGEs~PV~k~~Gd~V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqr 320 (713)
T COG2217 241 GERIPVDGVVVSGSSSVDESMLTGESLPVEKKPGDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQR 320 (713)
T ss_pred CCEecCCeEEEeCcEEeecchhhCCCCCEecCCCCEEeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCCchHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhHhHHHHHHHHHHHHHHHHhcCCchhHHHHHHhhhhhhhccccchhhHHHHHHHHHHHHHHcCCcccchhhhh
Q 001837 304 FVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCALTKAATSGLLIKGGDYLQ 383 (1007)
Q Consensus 304 ~~~~i~~~~~~i~l~ia~l~~l~~~~~~~~~~~~~~~~al~vLv~a~P~aL~l~i~la~~~a~~~lak~gilvk~~~~lE 383 (1007)
++||++.||+|++++++++.|++|++++..++..|+++++++|+++|||+|.+++|+++..++.+++++|||+|++.++|
T Consensus 321 laDr~a~~fvp~vl~ia~l~f~~w~~~~~~~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE 400 (713)
T COG2217 321 LADRVASYFVPVVLVIAALTFALWPLFGGGDWETALYRALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALE 400 (713)
T ss_pred HHHHHHHccHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHH
Confidence 99999999999999999999997777765688899999999999999999999999999999999999999999999999
Q ss_pred hccCccEEEecCccccccCceEEEEeecCCCCCCHHHHHHHHHhhhhcCCChHHHHHHHHhhhCCCCCCCCCcccceecc
Q 001837 384 TLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDINLNTLLYWVSSIESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFP 463 (1007)
Q Consensus 384 ~Lg~vd~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~lL~~~asle~~s~hPi~~AIv~~a~~~~i~~~~~~~~~~~~~~ 463 (1007)
+++++|+++||||||||+|+++|.++...+. +.+++|.+++++|..|.||+++||+++++..+. ..+..+++++
T Consensus 401 ~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~--~e~~~L~laAalE~~S~HPiA~AIv~~a~~~~~----~~~~~~~~i~ 474 (713)
T COG2217 401 RLAKVDTVVFDKTGTLTEGKPEVTDVVALDG--DEDELLALAAALEQHSEHPLAKAIVKAAAERGL----PDVEDFEEIP 474 (713)
T ss_pred hhccCCEEEEeCCCCCcCCceEEEEEecCCC--CHHHHHHHHHHHHhcCCChHHHHHHHHHHhcCC----CCccceeeec
Confidence 9999999999999999999999999998765 778999999999999999999999999988772 2345599999
Q ss_pred CCceEEEECCEEEEEecHHHHHHhCCCCC---CCcCCcCCCCCeEEEEEECCEEEEEEEecCcccccHHHHHHHHHHCCC
Q 001837 464 GEGIYGKIGGEEIYIGNRKIAQRAGCGTV---PSVDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGI 540 (1007)
Q Consensus 464 g~Gi~~~i~g~~i~ig~~~~~~~~~~~~~---~~~~~~~~~g~~~i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGI 540 (1007)
|.|+.+.++|+.+.+|+++|+.+.+.... ...+.+..+|.++++++.|++++|+|.+.|++||+++++|++||++|+
T Consensus 475 G~Gv~~~v~g~~v~vG~~~~~~~~~~~~~~~~~~~~~~~~~G~t~v~va~dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi 554 (713)
T COG2217 475 GRGVEAEVDGERVLVGNARLLGEEGIDLPLLSERIEALESEGKTVVFVAVDGKLVGVIALADELRPDAKEAIAALKALGI 554 (713)
T ss_pred cCcEEEEECCEEEEEcCHHHHhhcCCCccchhhhHHHHHhcCCeEEEEEECCEEEEEEEEeCCCChhHHHHHHHHHHCCC
Confidence 99999999999999999999987775432 224455668999999999999999999999999999999999999999
Q ss_pred eEEEEcCCCHHHHHHHHHHhCCCcceEEeccCHhHHHHHHHHHhhCC-eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHH
Q 001837 541 RTAMLTGDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEG-KTAMIGDGINDAPALATADIGISMGISGSALA 619 (1007)
Q Consensus 541 kv~mlTGD~~~tA~~vA~~lGI~~~~V~ar~sPeqK~~iV~~Lq~~G-~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A 619 (1007)
+++|+||||+.+|.+||+++||+ +|+|+++||||+++|+.||++| +|+|||||+||+|||++|||||||| +|+|+|
T Consensus 555 ~~~mLTGDn~~~A~~iA~~lGId--~v~AellPedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG-~GtDvA 631 (713)
T COG2217 555 KVVMLTGDNRRTAEAIAKELGID--EVRAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMG-SGTDVA 631 (713)
T ss_pred eEEEEcCCCHHHHHHHHHHcChH--hheccCCcHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeec-CCcHHH
Confidence 99999999999999999999998 9999999999999999999998 9999999999999999999999999 699999
Q ss_pred HhhcCEEEecCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhhhhccc
Q 001837 620 TETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAGIIALALGGHPLVWAAVLADVGTCLIVILNSMLLLHE 698 (1007)
Q Consensus 620 ~~aADiVLl~~~l~~I~~lI~~gR~~~~~i~~ni~~al~~ni~~i~la~~g~~~~~~ail~~~~s~l~vvlNSlrll~~ 698 (1007)
+++||++|+++|+..++++|+++|+++++|+||++|+++||+++|+++++|+.+||+|.+.|.+++++|++||+||++.
T Consensus 632 ~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~yn~~~iplA~~g~l~p~~A~~am~~SSv~VvlNaLRL~~~ 710 (713)
T COG2217 632 IEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIPLAAGGLLTPWIAALAMSGSSVLVVLNALRLLRS 710 (713)
T ss_pred HHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHcccHHHHHHHHHHhhcc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999975
No 2
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.6e-120 Score=1066.93 Aligned_cols=696 Identities=41% Similarity=0.662 Sum_probs=645.6
Q ss_pred eEEEEEecCCCCchHHHHHHHHHhCCCCeeEEEEecCCCeEEEEEcCCcccHHHHHHHhhhcccccccccccccccc---
Q 001837 10 QKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARFEANVRAYGGTSYQ--- 86 (1007)
Q Consensus 10 ~~~~l~V~Gm~C~~Ca~~IE~~L~~l~GV~~v~Vn~~t~tv~V~~D~~~~s~~~I~~aL~~aGy~as~~~~g~~~~~--- 86 (1007)
.+++|.|.||+|.+|+..||+.+.+++||++++++..++++.|.|||..+++.++.+.++..++.+..+.+......
T Consensus 146 ~~i~L~v~g~~c~s~~~~ie~~l~~l~gV~~~sv~~~t~~~~V~~~~~~~~pr~i~k~ie~~~~~~~~~~~~~~~~~~~l 225 (951)
T KOG0207|consen 146 QKIYLDVLGMTCASCVSKIESILERLRGVKSFSVSLATDTAIVVYDPEITGPRDIIKAIEETGFEASVRPYGDTTFKNSL 225 (951)
T ss_pred CcEEEEeecccccchhhhhHHHHhhccCeeEEEEeccCCceEEEecccccChHHHHHHHHhhcccceeeeccccchhhhh
Confidence 67899999999999999999999999999999999999999999999999999999999999999888775543332
Q ss_pred ------cCCCchHHHHHHHHHHHHHHHHhhhhHHH---------------------HHHHhhhhchHHHHHHHHHHHHcC
Q 001837 87 ------KKWPSPYAMACGVLLAISILKYVYHPLRW---------------------FALGAVAIGIFPIILKGLAAIRNF 139 (1007)
Q Consensus 87 ------~~~~~~~~~~~gill~isl~~~~~~~l~~---------------------l~l~~~~~~~~p~~~~a~~~l~~~ 139 (1007)
.+|+++++..+++.+..+|+.++++++.| +.+++.+++++|||..||++++++
T Consensus 226 ~~~~ei~~w~~~fl~s~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~vqf~~G~~fy~~A~ksL~~g 305 (951)
T KOG0207|consen 226 KHKEEIRKWKRPFLISLGFSLPVSFAMIICPPLAWILALLVPFLPGLSYGNSLSFVLATPVQFVGGRPFYLAAYKSLKRG 305 (951)
T ss_pred hhhhHHHhcchHHHHHHHHHHHHHHHHHHhccchhhhhhhccccccchhhhHHHhhhheeeEEecceeeHHHHHHHHhcC
Confidence 67888887776666655555544444333 113445678899999999999999
Q ss_pred cccHHHHHHHHHHHHHhhhhHHHHHHHHH---------------HHHHHHHHHHHHHHHHHHHHHHhhccCCcceEEecC
Q 001837 140 KLDINILVLIAVIGTIAMNDYIEAGIIVF---------------LFTIAEWLESRASHKATAVMSSLMSIAPQKAIIAGT 204 (1007)
Q Consensus 140 ~l~i~~Li~ia~~~~~~~~~y~~a~~Il~---------------l~~i~~~le~~~~~k~~~~l~~L~~~~p~~~~V~rd 204 (1007)
..|||+|+.++...+|+++.+.+...+++ ++++++|+|.+++.|+...+..|+++.|.++.++.+
T Consensus 306 ~~nMdvLv~L~t~aay~~S~~~~~~~~~~~~~~tfFdt~~MLi~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~ 385 (951)
T KOG0207|consen 306 SANMDVLVVLGTTAAYFYSIFSLLAAVVFDSPPTFFDTSPMLITFITLGRWLESLAKGKTSEALSKLMSLAPSKATIIED 385 (951)
T ss_pred CCCceeehhhHHHHHHHHHHHHHHHHHHccCcchhccccHHHHHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEeec
Confidence 99999999999999999987776665555 889999999999999999999999999999999988
Q ss_pred C---EEeeCCCcccCcEEEEeCCCcccccEEEEeceeeeecccCCCCCeeeEecCCCeeeeceEEeeeeEEEEEEEEecc
Q 001837 205 G---EEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGKCEVDEKTLTGESYPVSKQKGSTVWAGTINLNGYISVETTAVAED 281 (1007)
Q Consensus 205 g---~~V~~~dLv~GDIV~L~~Ge~VPaDgiVl~G~~~VDES~LTGES~Pv~K~~g~~V~aGT~v~~G~~~~~V~~tG~~ 281 (1007)
| ++|+++.|++||+|.|.||++||+||+|++|+++||||++|||++||.|++|+.|.+||++.+|.+.++++++|.|
T Consensus 386 g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~Gss~VDEs~iTGEs~PV~Kk~gs~ViaGsiN~nG~l~VkaT~~g~d 465 (951)
T KOG0207|consen 386 GSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVDGSSEVDESLITGESMPVPKKKGSTVIAGSINLNGTLLVKATKVGGD 465 (951)
T ss_pred CCcceEeeeeeeccCCEEEECCCCccccccEEEeCceeechhhccCCceecccCCCCeeeeeeecCCceEEEEEEecccc
Confidence 7 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEehhHHHHHHhhccchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHhcC----------CchhHHHHHHhhhhhhhcc
Q 001837 282 CVVAKMAKLVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGV----------SNHKQWFHLALVVLVSACP 351 (1007)
Q Consensus 282 T~~gki~~lv~~a~~~ks~lq~~~~~i~~~~~~i~l~ia~l~~l~~~~~~~----------~~~~~~~~~al~vLv~a~P 351 (1007)
|.+++|.+++++++..++|+|+++|+++.||+|+++++++.++++|.+++. ..+..+|++++++++++||
T Consensus 466 ttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~~~~~~~~~~~~~~a~~~aisVlviACP 545 (951)
T KOG0207|consen 466 TTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIVFKYPRSFFDAFSHAFQLAISVLVIACP 545 (951)
T ss_pred chHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHccccccCcchhhHHHHHHHHhhheEEEEECc
Confidence 999999999999999999999999999999999999999999999998876 4567789999999999999
Q ss_pred ccchhhHHHHHHHHHHHHHHcCCcccchhhhhhccCccEEEecCccccccCceEEEEeecCCCCCCHHHHHHHHHhhhhc
Q 001837 352 CALILSTPVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDINLNTLLYWVSSIESK 431 (1007)
Q Consensus 352 ~aL~l~i~la~~~a~~~lak~gilvk~~~~lE~Lg~vd~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~lL~~~asle~~ 431 (1007)
|+|++++|++++.+....+++|+|+|+.++||.+.++++|+||||||||+|++.|.++..+.+..+..++|+++++.|..
T Consensus 546 CaLgLATPtAvmvatgvgA~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~~~~~e~l~~v~a~Es~ 625 (951)
T KOG0207|consen 546 CALGLATPTAVMVATGVGATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNPISLKEALALVAAMESG 625 (951)
T ss_pred hhhhcCCceEEEEEechhhhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCcccHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999988878899999999999999
Q ss_pred CCChHHHHHHHHhhhCCCCCCCCCcccceeccCCc--eEEEECCEEEEEecHHHHHHhCCCCCCC----cCCcCCCCCeE
Q 001837 432 SSHPMSAALVEYGRSLSIEPKPEDVEDYQNFPGEG--IYGKIGGEEIYIGNRKIAQRAGCGTVPS----VDGPKMKGNTI 505 (1007)
Q Consensus 432 s~hPi~~AIv~~a~~~~i~~~~~~~~~~~~~~g~G--i~~~i~g~~i~ig~~~~~~~~~~~~~~~----~~~~~~~g~~~ 505 (1007)
+.||+++||++|+++.....++..+.+++.+||+| +...+++..+.+||++|+.+.+....+. .++.+..|+++
T Consensus 626 SeHPig~AIv~yak~~~~~~~~~~~~~~~~~pg~g~~~~~~~~~~~i~iGN~~~~~r~~~~~~~~i~~~~~~~e~~g~tv 705 (951)
T KOG0207|consen 626 SEHPIGKAIVDYAKEKLVEPNPEGVLSFEYFPGEGIYVTVTVDGNEVLIGNKEWMSRNGCSIPDDILDALTESERKGQTV 705 (951)
T ss_pred CcCchHHHHHHHHHhcccccCccccceeecccCCCcccceEEeeeEEeechHHHHHhcCCCCchhHHHhhhhHhhcCceE
Confidence 99999999999999988777778888999999999 6688999999999999999998875433 34456789999
Q ss_pred EEEEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEEeccCHhHHHHHHHHHhh
Q 001837 506 GYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQ 585 (1007)
Q Consensus 506 i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~ar~sPeqK~~iV~~Lq~ 585 (1007)
.+++.|++++|++.++|++|||+..+|..||++|++++|+||||..+|+++|+++||+ .|||++.|+||.++|+.||+
T Consensus 706 v~v~vn~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~--~V~aev~P~~K~~~Ik~lq~ 783 (951)
T KOG0207|consen 706 VYVAVNGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID--NVYAEVLPEQKAEKIKEIQK 783 (951)
T ss_pred EEEEECCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc--eEEeccCchhhHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999988 99999999999999999999
Q ss_pred CC-eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcCEEEecCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001837 586 EG-KTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAGII 664 (1007)
Q Consensus 586 ~G-~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aADiVLl~~~l~~I~~lI~~gR~~~~~i~~ni~~al~~ni~~i 664 (1007)
+| .|+|||||+||+|||.+|||||+|| .|+++|.++|||||+.+|+..++.+|+++|+++++|++|+.|++.||+++|
T Consensus 784 ~~~~VaMVGDGINDaPALA~AdVGIaig-~gs~vAieaADIVLmrn~L~~v~~ai~LSrkt~~rIk~N~~~A~~yn~~~I 862 (951)
T KOG0207|consen 784 NGGPVAMVGDGINDAPALAQADVGIAIG-AGSDVAIEAADIVLMRNDLRDVPFAIDLSRKTVKRIKLNFVWALIYNLVGI 862 (951)
T ss_pred cCCcEEEEeCCCCccHHHHhhccceeec-cccHHHHhhCCEEEEccchhhhHHHHHHHHHHHhhHHHHHHHHHHHHHhhh
Confidence 96 9999999999999999999999999 789999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhh------HHHHHHHHHHHHHHHHHHHhhhhhcccccCCCCcccc
Q 001837 665 ALALGGH------PLVWAAVLADVGTCLIVILNSMLLLHETHTHRGKCIK 708 (1007)
Q Consensus 665 ~la~~g~------~~~~~ail~~~~s~l~vvlNSlrll~~~~~~~~~~~r 708 (1007)
+++++++ ++||+|.+.+.++++.+++||++|++++++...+.||
T Consensus 863 pIAagvF~P~~~~L~Pw~A~lama~SSvsVv~sSllLk~~k~p~~~~~~~ 912 (951)
T KOG0207|consen 863 PIAAGVFAPFGIVLPPWMASLAMAASSVSVVLSSLLLKRYKKPTINKLYR 912 (951)
T ss_pred hhheecccCCccccCchHHHHHHHhhhHHHhhhHHHHhhcccccccccee
Confidence 8887654 3799999999999999999999999998887776666
No 3
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=4.9e-108 Score=1009.13 Aligned_cols=682 Identities=32% Similarity=0.530 Sum_probs=606.1
Q ss_pred eeEEEEEecCCCCchHHHHHHHHHhCCCCeeEEEEecCCCeEEEEEcCCcccHHHHHHHhhhccccccccccccccc-cc
Q 001837 9 YQKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARFEANVRAYGGTSY-QK 87 (1007)
Q Consensus 9 ~~~~~l~V~Gm~C~~Ca~~IE~~L~~l~GV~~v~Vn~~t~tv~V~~D~~~~s~~~I~~aL~~aGy~as~~~~g~~~~-~~ 87 (1007)
..+..+.++||+|++|++.+|+.+.+.+||..+++++.++++.+.|++.. . +++.+.+++.||.+........+. ..
T Consensus 52 ~~r~~l~V~Gm~C~sCa~~Ie~aL~~~~GV~~v~Vn~at~k~~V~~d~~~-~-~~I~~aI~~~Gy~a~~~~~~~~~~~~~ 129 (741)
T PRK11033 52 GTRYSWKVSGMDCPSCARKVENAVRQLAGVNQVQVLFATEKLVVDADNDI-R-AQVESAVQKAGFSLRDEQAAAAAPESR 129 (741)
T ss_pred CceEEEEECCCCcHHHHHHHHHHHhcCCCeeeEEEEcCCCeEEEEecccc-h-HHHHHHHHhcccccccccchhhhHHHH
Confidence 34678999999999999999999999999999999999999999998763 3 777788888899865432111111 01
Q ss_pred CCC-chHHHHHHHHHHHHHH-HHhhhhHHHH-HHHhhhhchHHHHHHHHHHHHcCc-ccHHHHHHHHHHHHHhhhhHHHH
Q 001837 88 KWP-SPYAMACGVLLAISIL-KYVYHPLRWF-ALGAVAIGIFPIILKGLAAIRNFK-LDINILVLIAVIGTIAMNDYIEA 163 (1007)
Q Consensus 88 ~~~-~~~~~~~gill~isl~-~~~~~~l~~l-~l~~~~~~~~p~~~~a~~~l~~~~-l~i~~Li~ia~~~~~~~~~y~~a 163 (1007)
.|. ....++++.++++++. ..+.+++.|+ ++++++++++||+++||+.++++. ++|++|+.++++++++++.|.++
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~L~~~a~~~a~~~~~~~~a 209 (741)
T PRK11033 130 LKSENLPLITLAVMMAISWGLEQFNHPFGQLAFIATTLVGLYPIARKALRLIRSGSPFAIETLMSVAAIGALFIGATAEA 209 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHcchHHH
Confidence 111 1111112222222221 1111222333 334567889999999999999988 59999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcceEEecCC--EEeeCCCcccCcEEEEeCCCcccccEEEEeceeeee
Q 001837 164 GIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAIIAGTG--EEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGKCEVD 241 (1007)
Q Consensus 164 ~~Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~~~~V~rdg--~~V~~~dLv~GDIV~L~~Ge~VPaDgiVl~G~~~VD 241 (1007)
+++++++++++|+|.++++|+++.+++|+++.|.+++++|+| ++|++++|+|||+|+|++||+||+||+|++|++.||
T Consensus 210 ~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g~~~vd 289 (741)
T PRK11033 210 AMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSPFASFD 289 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEECcEEee
Confidence 999999999999999999999999999999999999999999 789999999999999999999999999999999999
Q ss_pred cccCCCCCeeeEecCCCeeeeceEEeeeeEEEEEEEEecceEEehhHHHHHHhhccchHHHHHHHHHHHhHhHHHHHHHH
Q 001837 242 EKTLTGESYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVDKFSQYYTPAVIFISA 321 (1007)
Q Consensus 242 ES~LTGES~Pv~K~~g~~V~aGT~v~~G~~~~~V~~tG~~T~~gki~~lv~~a~~~ks~lq~~~~~i~~~~~~i~l~ia~ 321 (1007)
||+|||||.|+.|++|+.||+||++.+|.++++|+++|.+|.++||.+++++++.+++|+|+.+++++++|+|+++++++
T Consensus 290 es~lTGEs~Pv~k~~Gd~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~v~~~a~ 369 (741)
T PRK11033 290 ESALTGESIPVERATGEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPAIMLVAL 369 (741)
T ss_pred cccccCCCCCEecCCCCeeccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCchhHHHHHHhhhhhhhccccchhhHHHHHHHHHHHHHHcCCcccchhhhhhccCccEEEecCcccccc
Q 001837 322 CVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITR 401 (1007)
Q Consensus 322 l~~l~~~~~~~~~~~~~~~~al~vLv~a~P~aL~l~i~la~~~a~~~lak~gilvk~~~~lE~Lg~vd~I~fDKTGTLT~ 401 (1007)
+++++|+++...++..|+++++++|+++|||+|.+++|+++..++.+++|+||++|++.++|+|+++|+||||||||||+
T Consensus 370 ~~~~~~~~~~~~~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDKTGTLT~ 449 (741)
T PRK11033 370 LVILVPPLLFAAPWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDKTGTLTE 449 (741)
T ss_pred HHHHHHHHHccCCHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeCCCCCcC
Confidence 99998866655678889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEeecCCCCCCHHHHHHHHHhhhhcCCChHHHHHHHHhhhCCCCCCCCCcccceeccCCceEEEECCEEEEEecH
Q 001837 402 GEFVMSEFQPLSEDINLNTLLYWVSSIESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFPGEGIYGKIGGEEIYIGNR 481 (1007)
Q Consensus 402 g~~~v~~i~~~~~~~~~~~lL~~~asle~~s~hPi~~AIv~~a~~~~i~~~~~~~~~~~~~~g~Gi~~~i~g~~i~ig~~ 481 (1007)
|+|+|.++.+.+. ++.++++.+++++|..+.||+++||++++++.++.. ...++++..+|.|+.+.++|..+.+|++
T Consensus 450 g~~~v~~~~~~~~-~~~~~~l~~aa~~e~~s~hPia~Ai~~~a~~~~~~~--~~~~~~~~~~g~Gv~~~~~g~~~~ig~~ 526 (741)
T PRK11033 450 GKPQVTDIHPATG-ISESELLALAAAVEQGSTHPLAQAIVREAQVRGLAI--PEAESQRALAGSGIEGQVNGERVLICAP 526 (741)
T ss_pred CceEEEEEEecCC-CCHHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCCC--CCCcceEEEeeEEEEEEECCEEEEEecc
Confidence 9999999987543 567889999999999999999999999998877653 2456788889999999999999999999
Q ss_pred HHHHHhCCCCCCCcCCcCCCCCeEEEEEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhC
Q 001837 482 KIAQRAGCGTVPSVDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLG 561 (1007)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~g~~~i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lG 561 (1007)
+++.+.........+.+..+|.++++++.|++++|++.|+|++||+++++|++|+++|++++|+|||+..+|.++|+++|
T Consensus 527 ~~~~~~~~~~~~~~~~~~~~g~~~v~va~~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lg 606 (741)
T PRK11033 527 GKLPPLADAFAGQINELESAGKTVVLVLRNDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELG 606 (741)
T ss_pred hhhhhccHHHHHHHHHHHhCCCEEEEEEECCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcC
Confidence 98754211111123445678999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcceEEeccCHhHHHHHHHHHhhCCeEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcCEEEecCCcchHHHHHHH
Q 001837 562 NALNVVHSELLPEDKAKIINQFKQEGKTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIRL 641 (1007)
Q Consensus 562 I~~~~V~ar~sPeqK~~iV~~Lq~~G~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aADiVLl~~~l~~I~~lI~~ 641 (1007)
|. ++++++|+||..+|+.||+.+.|+|||||+||+|||++|||||+|| +++++++++||++++++++..|+.++++
T Consensus 607 i~---~~~~~~p~~K~~~v~~l~~~~~v~mvGDgiNDapAl~~A~vgia~g-~~~~~a~~~adivl~~~~l~~l~~~i~~ 682 (741)
T PRK11033 607 ID---FRAGLLPEDKVKAVTELNQHAPLAMVGDGINDAPAMKAASIGIAMG-SGTDVALETADAALTHNRLRGLAQMIEL 682 (741)
T ss_pred CC---eecCCCHHHHHHHHHHHhcCCCEEEEECCHHhHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHH
Confidence 96 7889999999999999997779999999999999999999999999 8999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhhhhcccc
Q 001837 642 ARKAHWKVIENIAVSIATKAGIIALALGGHPLVWAAVLADVGTCLIVILNSMLLLHET 699 (1007)
Q Consensus 642 gR~~~~~i~~ni~~al~~ni~~i~la~~g~~~~~~ail~~~~s~l~vvlNSlrll~~~ 699 (1007)
||+++++|+||+.|+++||+++++++++|+.+||+++++|.++++++++||+|++|++
T Consensus 683 sr~~~~~I~~nl~~a~~~n~~~i~~a~~g~~~~~~a~~~~~~ss~~v~~Nslrl~~~~ 740 (741)
T PRK11033 683 SRATHANIRQNITIALGLKAIFLVTTLLGITGLWLAVLADSGATALVTANALRLLRKR 740 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHcChHHHHHHHHHhhcccC
Confidence 9999999999999999999999999999999999999999999999999999999765
No 4
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=2.4e-100 Score=956.85 Aligned_cols=678 Identities=26% Similarity=0.427 Sum_probs=590.4
Q ss_pred EEEEEecCCCCchHHHHHHHHHhCCCCeeEEEEecCCCeEEEEEcCCcccHHHHHHHhhhccccccccccccc-c--ccc
Q 001837 11 KSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARFEANVRAYGGT-S--YQK 87 (1007)
Q Consensus 11 ~~~l~V~Gm~C~~Ca~~IE~~L~~l~GV~~v~Vn~~t~tv~V~~D~~~~s~~~I~~aL~~aGy~as~~~~g~~-~--~~~ 87 (1007)
+..+.++||+|.+|++.+++.+.+.+||..+.+++.+++..+.+. .+.+++.+.+++.||.+.+...+.. . ...
T Consensus 100 ~~~l~V~Gm~Ca~Ca~~Ie~~L~~~~GV~~a~vnl~t~~~~V~~~---~s~~~I~~~I~~~Gy~a~~~~~~~~~~~~~~~ 176 (834)
T PRK10671 100 SQQLLLSGMSCASCVSRVQNALQSVPGVTQARVNLAERTALVMGS---ASPQDLVQAVEKAGYGAEAIEDDAKRRERQQE 176 (834)
T ss_pred eEEEEeCCcCcHHHHHHHHHHHhcCCCceeeeeecCCCeEEEEcc---CCHHHHHHHHHhcCCCccccccccchhhhhhh
Confidence 567899999999999999999999999999999999999888732 3567788888888987654322110 0 000
Q ss_pred ---CC--CchHHHHHH-HH----HHHHHHH-Hh-hhh---HHHH-----HHHhhhhchHHHHHHHHHHHHcCcccHHHHH
Q 001837 88 ---KW--PSPYAMACG-VL----LAISILK-YV-YHP---LRWF-----ALGAVAIGIFPIILKGLAAIRNFKLDINILV 147 (1007)
Q Consensus 88 ---~~--~~~~~~~~g-il----l~isl~~-~~-~~~---l~~l-----~l~~~~~~~~p~~~~a~~~l~~~~l~i~~Li 147 (1007)
.+ ...+.+..+ ++ ++++++. ++ +.+ ..|+ ++++++++++||+++||+.+++++++||+|+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~~~l~~~~~~md~l~ 256 (834)
T PRK10671 177 TAQATMKRFRWQAIVALAVGIPVMVWGMIGDNMMVTADNRSLWLVIGLITLAVMVFAGGHFYRSAWKSLLNGSATMDTLV 256 (834)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccchhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhCCCCcHHHH
Confidence 00 011111111 11 1112211 01 111 1232 2456778899999999999999999999999
Q ss_pred HHHHHHHHhhhh----------------HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcceEEecCC--EEe
Q 001837 148 LIAVIGTIAMND----------------YIE-AGIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAIIAGTG--EEV 208 (1007)
Q Consensus 148 ~ia~~~~~~~~~----------------y~~-a~~Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~~~~V~rdg--~~V 208 (1007)
+++++.+|+++. |++ ++++++++.+++|+|.+.+.|+.+.+++|+++.|.+++++|+| ++|
T Consensus 257 ~l~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v 336 (834)
T PRK10671 257 ALGTGAAWLYSMSVNLWPQWFPMEARHLYYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSV 336 (834)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEE
Confidence 999999987642 555 5778899999999999999999999999999999999999887 789
Q ss_pred eCCCcccCcEEEEeCCCcccccEEEEeceeeeecccCCCCCeeeEecCCCeeeeceEEeeeeEEEEEEEEecceEEehhH
Q 001837 209 DAGEVKLNTVLAVKAGEVIPIDGIVVDGKCEVDEKTLTGESYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMA 288 (1007)
Q Consensus 209 ~~~dLv~GDIV~L~~Ge~VPaDgiVl~G~~~VDES~LTGES~Pv~K~~g~~V~aGT~v~~G~~~~~V~~tG~~T~~gki~ 288 (1007)
++++|+|||+|+|++||+||+||+|++|++.||||+|||||.|+.|++|+.||+||+|.+|.+.++|+++|.+|.+++|.
T Consensus 337 ~~~~l~~GD~v~v~~G~~iP~Dg~v~~g~~~vdeS~lTGEs~pv~k~~gd~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~ 416 (834)
T PRK10671 337 PLADVQPGMLLRLTTGDRVPVDGEITQGEAWLDEAMLTGEPIPQQKGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRII 416 (834)
T ss_pred EHHHcCCCCEEEEcCCCEeeeeEEEEEceEEEeehhhcCCCCCEecCCCCEEEecceecceeEEEEEEEEcCcChHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHhcCC-chhHHHHHHhhhhhhhccccchhhHHHHHHHHHH
Q 001837 289 KLVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVS-NHKQWFHLALVVLVSACPCALILSTPVVTYCALT 367 (1007)
Q Consensus 289 ~lv~~a~~~ks~lq~~~~~i~~~~~~i~l~ia~l~~l~~~~~~~~-~~~~~~~~al~vLv~a~P~aL~l~i~la~~~a~~ 367 (1007)
+++++++..++++|+.+++++++|+|++++++++.+++|++.+.. .+...+.+++++|+++|||+|++++|+++..++.
T Consensus 417 ~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~~~~~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~ 496 (834)
T PRK10671 417 RMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVG 496 (834)
T ss_pred HHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHH
Confidence 999999999999999999999999999999999988887765422 1344577899999999999999999999999999
Q ss_pred HHHHcCCcccchhhhhhccCccEEEecCccccccCceEEEEeecCCCCCCHHHHHHHHHhhhhcCCChHHHHHHHHhhhC
Q 001837 368 KAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDINLNTLLYWVSSIESKSSHPMSAALVEYGRSL 447 (1007)
Q Consensus 368 ~lak~gilvk~~~~lE~Lg~vd~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~lL~~~asle~~s~hPi~~AIv~~a~~~ 447 (1007)
+++++||++|+++++|+|+++|++|||||||||+|+|+|.++...+. .+..+++.+++++|..+.||+++||+++++..
T Consensus 497 ~~a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~-~~~~~~l~~a~~~e~~s~hp~a~Ai~~~~~~~ 575 (834)
T PRK10671 497 RAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNG-VDEAQALRLAAALEQGSSHPLARAILDKAGDM 575 (834)
T ss_pred HHHHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCC-CCHHHHHHHHHHHhCCCCCHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999876543 56778899999999999999999999988643
Q ss_pred CCCCCCCCcccceeccCCceEEEECCEEEEEecHHHHHHhCCCCC---CCcCCcCCCCCeEEEEEECCEEEEEEEecCcc
Q 001837 448 SIEPKPEDVEDYQNFPGEGIYGKIGGEEIYIGNRKIAQRAGCGTV---PSVDGPKMKGNTIGYIFSGASPVGIFCLSDAC 524 (1007)
Q Consensus 448 ~i~~~~~~~~~~~~~~g~Gi~~~i~g~~i~ig~~~~~~~~~~~~~---~~~~~~~~~g~~~i~v~~d~~~lGli~l~D~l 524 (1007)
. ...+.+++.++|.|+.+.++|..+.+|+++++.+.+.... +..+.+...|.++++++.|+.++|++.+.|++
T Consensus 576 ~----~~~~~~~~~~~g~Gv~~~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~va~~~~~~g~~~l~d~~ 651 (834)
T PRK10671 576 T----LPQVNGFRTLRGLGVSGEAEGHALLLGNQALLNEQQVDTKALEAEITAQASQGATPVLLAVDGKAAALLAIRDPL 651 (834)
T ss_pred C----CCCcccceEecceEEEEEECCEEEEEeCHHHHHHcCCChHHHHHHHHHHHhCCCeEEEEEECCEEEEEEEccCcc
Confidence 2 2346788899999999999999999999999876554321 11234456788999999999999999999999
Q ss_pred cccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEEeccCHhHHHHHHHHHhhCC-eEEEEcCCccCHHHHh
Q 001837 525 RTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEG-KTAMIGDGINDAPALA 603 (1007)
Q Consensus 525 R~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~ar~sPeqK~~iV~~Lq~~G-~VamVGDG~NDa~ALk 603 (1007)
||+++++|++|++.|++++|+|||+..+|..+++++||+ .+|+++.|++|.++|+.|+..| .|+|+|||.||++||+
T Consensus 652 r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~--~~~~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~ 729 (834)
T PRK10671 652 RSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGID--EVIAGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALA 729 (834)
T ss_pred hhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC--EEEeCCCHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHHH
Confidence 999999999999999999999999999999999999999 9999999999999999999998 8999999999999999
Q ss_pred hCCeeEEeCCCCcHHHHhhcCEEEecCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------hh-hHHHHH
Q 001837 604 TADIGISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAGIIALAL------GG-HPLVWA 676 (1007)
Q Consensus 604 ~ADVGIAmg~~gs~~A~~aADiVLl~~~l~~I~~lI~~gR~~~~~i~~ni~~al~~ni~~i~la~------~g-~~~~~~ 676 (1007)
+|||||+|| ++++.++++||++++++++..|+.++++||+++++|+||+.|+++||++++++++ +| +++||+
T Consensus 730 ~Agvgia~g-~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a~~yn~~~i~~a~g~~~p~~g~~l~p~~ 808 (834)
T PRK10671 730 QADVGIAMG-GGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSLGIPIAAGILWPFTGTLLNPVV 808 (834)
T ss_pred hCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhhhhcccCHHH
Confidence 999999999 8999999999999999999999999999999999999999999999999999987 45 568899
Q ss_pred HHHHHHHHHHHHHHhhhhhcccc
Q 001837 677 AVLADVGTCLIVILNSMLLLHET 699 (1007)
Q Consensus 677 ail~~~~s~l~vvlNSlrll~~~ 699 (1007)
|.+.|.+++++|++||+||+|++
T Consensus 809 a~~~m~~ss~~vv~nslrl~~~~ 831 (834)
T PRK10671 809 AGAAMALSSITVVSNANRLLRFK 831 (834)
T ss_pred HHHHhcccceeehhhhHHhcCCC
Confidence 99999999999999999997544
No 5
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=8.7e-92 Score=867.44 Aligned_cols=579 Identities=22% Similarity=0.343 Sum_probs=484.2
Q ss_pred cccccccccccccccCCCchHHHHHHHHHHHHHHHHhhhhHHHHHHHhhhhchHHHHHHHHHHHHcCcccHHHHHHHHHH
Q 001837 73 FEANVRAYGGTSYQKKWPSPYAMACGVLLAISILKYVYHPLRWFALGAVAIGIFPIILKGLAAIRNFKLDINILVLIAVI 152 (1007)
Q Consensus 73 y~as~~~~g~~~~~~~~~~~~~~~~gill~isl~~~~~~~l~~l~l~~~~~~~~p~~~~a~~~l~~~~l~i~~Li~ia~~ 152 (1007)
.+.+...+|+|....+.+..|. .|+..|++|+.|+++++.+
T Consensus 7 a~~r~~~~G~N~~~~~~~~~~~---------~~~~~~~~~~~~lL~~aa~------------------------------ 47 (755)
T TIGR01647 7 AKKRLAKYGPNELPEKKVSPLL---------KFLGFFWNPLSWVMEAAAI------------------------------ 47 (755)
T ss_pred HHHHHHhcCCCCCCCCCCCHHH---------HHHHHHhchHHHHHHHHHH------------------------------
Confidence 3445567788887654444332 2566777777765544333
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcceEEecCC--EEeeCCCcccCcEEEEeCCCccccc
Q 001837 153 GTIAMNDYIEAGIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAIIAGTG--EEVDAGEVKLNTVLAVKAGEVIPID 230 (1007)
Q Consensus 153 ~~~~~~~y~~a~~Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~~~~V~rdg--~~V~~~dLv~GDIV~L~~Ge~VPaD 230 (1007)
+++++++|.++++++++++++..++.++++++++.+++|.++.|.+++|+||| ++|+++||+|||+|.|++||+||||
T Consensus 48 ~s~~~~~~~~~~~i~~~~~i~~~i~~~qe~~a~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaD 127 (755)
T TIGR01647 48 IAIALENWVDFVIILGLLLLNATIGFIEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPAD 127 (755)
T ss_pred HHHhhcchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEece
Confidence 23455778899999999999999999999999999999999999999999999 7999999999999999999999999
Q ss_pred EEEEece-eeeecccCCCCCeeeEecCCCeeeeceEEeeeeEEEEEEEEecceEEehhHHHHHHhhccchHHHHHHHHHH
Q 001837 231 GIVVDGK-CEVDEKTLTGESYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVDKFS 309 (1007)
Q Consensus 231 giVl~G~-~~VDES~LTGES~Pv~K~~g~~V~aGT~v~~G~~~~~V~~tG~~T~~gki~~lv~~a~~~ks~lq~~~~~i~ 309 (1007)
|+|++|+ +.||||+|||||.|+.|.+|+.+|+||.|.+|.++++|++||.+|.+|+|.+++++++.+++++|+.+++++
T Consensus 128 g~vi~g~~~~VDeS~LTGES~PV~K~~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~ 207 (755)
T TIGR01647 128 CRLFEGDYIQVDQAALTGESLPVTKKTGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIG 207 (755)
T ss_pred EEEEecCceEEEcccccCCccceEeccCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHH
Confidence 9999998 999999999999999999999999999999999999999999999999999999999888999999999999
Q ss_pred HhHhHHHHHHHHHHHHHHHHhcCCchhHHHHHHhhhhhhhccccchhhHHHHHHHHHHHHHHcCCcccchhhhhhccCcc
Q 001837 310 QYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCALTKAATSGLLIKGGDYLQTLAKVR 389 (1007)
Q Consensus 310 ~~~~~i~l~ia~l~~l~~~~~~~~~~~~~~~~al~vLv~a~P~aL~l~i~la~~~a~~~lak~gilvk~~~~lE~Lg~vd 389 (1007)
++++++++++++++++++++....++..++.+++++++++|||+||+++|++++.++++|+++|+++|+++++|+||.+|
T Consensus 208 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~ 287 (755)
T TIGR01647 208 LFLIVLIGVLVLIELVVLFFGRGESFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMD 287 (755)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCc
Confidence 99999988888888877766344677888999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCccccccCceEEEEeecCCCCCCHHHHHHHHHhh-hhcCCChHHHHHHHHhhhCCCCCCCCCcccceec--cCCc
Q 001837 390 FMAFDKTGTITRGEFVMSEFQPLSEDINLNTLLYWVSSI-ESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNF--PGEG 466 (1007)
Q Consensus 390 ~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~lL~~~asl-e~~s~hPi~~AIv~~a~~~~i~~~~~~~~~~~~~--~g~G 466 (1007)
+||||||||||+|+|+|.+++..++.++.++++.+++.. +..++||++.||++++.+.+.........+...+ .+++
T Consensus 288 ~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~l~~a~~~~~~~~~~pi~~Ai~~~~~~~~~~~~~~~~~~~~pf~~~~k~ 367 (755)
T TIGR01647 288 ILCSDKTGTLTLNKLSIDEILPFFNGFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKEARDGYKVLEFVPFDPVDKR 367 (755)
T ss_pred EEEecCCCccccCceEEEEEEecCCCCCHHHHHHHHHHhCCCCCCChHHHHHHHHHHHhHHHHhcCceEEEeccCCCCCe
Confidence 999999999999999999998765446677777777654 4678999999999988754311101111111112 3556
Q ss_pred eEEEE----CCEE--EEEecHHHHHHhCCCC-------CCCcCCcCCCCCeEEEEEE-----CCEEEEEEEecCcccccH
Q 001837 467 IYGKI----GGEE--IYIGNRKIAQRAGCGT-------VPSVDGPKMKGNTIGYIFS-----GASPVGIFCLSDACRTGA 528 (1007)
Q Consensus 467 i~~~i----~g~~--i~ig~~~~~~~~~~~~-------~~~~~~~~~~g~~~i~v~~-----d~~~lGli~l~D~lR~~a 528 (1007)
+.+.+ +|+. +..|+++++.+..... ....+++..+|.++++++. +++|+|+++|+||+||++
T Consensus 368 ~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~~~~~~~~~~~~~~~~~~G~rvl~vA~~~~e~~l~~~Gli~l~Dp~R~~a 447 (755)
T TIGR01647 368 TEATVEDPETGKRFKVTKGAPQVILDLCDNKKEIEEKVEEKVDELASRGYRALGVARTDEEGRWHFLGLLPLFDPPRHDT 447 (755)
T ss_pred EEEEEEeCCCceEEEEEeCChHHHHHhcCCcHHHHHHHHHHHHHHHhCCCEEEEEEEEcCCCCcEEEEEeeccCCChhhH
Confidence 66655 2444 3469998874432110 1123456678999999886 348999999999999999
Q ss_pred HHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc----------------------------eEEeccCHhHHHHHH
Q 001837 529 AEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN----------------------------VVHSELLPEDKAKII 580 (1007)
Q Consensus 529 ~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~----------------------------~V~ar~sPeqK~~iV 580 (1007)
+++|++|+++||+++|+|||++.||.++|+++||... .||||++|+||.++|
T Consensus 448 ~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV 527 (755)
T TIGR01647 448 KETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIV 527 (755)
T ss_pred HHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHH
Confidence 9999999999999999999999999999999999741 299999999999999
Q ss_pred HHHhhCC-eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcCEEEecCCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001837 581 NQFKQEG-KTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIAT 659 (1007)
Q Consensus 581 ~~Lq~~G-~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aADiVLl~~~l~~I~~lI~~gR~~~~~i~~ni~~al~~ 659 (1007)
+.||+.| +|+|+|||+||+|||++|||||||| +|+++|+++||+||++++|..|+.++++||++|+++++|+.|.++.
T Consensus 528 ~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~-~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~ 606 (755)
T TIGR01647 528 EILQKRGHLVGMTGDGVNDAPALKKADVGIAVA-GATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAE 606 (755)
T ss_pred HHHHhcCCEEEEEcCCcccHHHHHhCCeeEEec-CCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999 8999999999999999999999999 8999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHh-----hh-----HHHHHHHHHHHHHHHHHHHhh
Q 001837 660 KAGIIALALG-----GH-----PLVWAAVLADVGTCLIVILNS 692 (1007)
Q Consensus 660 ni~~i~la~~-----g~-----~~~~~ail~~~~s~l~vvlNS 692 (1007)
|+..+++.++ ++ +.+|++++.|. +++.+.+..
T Consensus 607 n~~~~~~~~~~~l~~~~~l~~~~il~~~l~~d~-~~~~l~~~~ 648 (755)
T TIGR01647 607 TIRIVFFFGLLILILNFYFPPIMVVIIAILNDG-TIMTIAYDN 648 (755)
T ss_pred cHHHHHHHHHHHHHhCcchhHHHHHHHHHHHhH-hHhhccCCC
Confidence 9864432222 21 23466666553 344444444
No 6
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=2.5e-90 Score=830.57 Aligned_cols=531 Identities=36% Similarity=0.581 Sum_probs=494.7
Q ss_pred chHHHHHHHHHHHHcCcccHHHHHHHHHHHHHhhh-----------------hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001837 124 GIFPIILKGLAAIRNFKLDINILVLIAVIGTIAMN-----------------DYIEAGIIVFLFTIAEWLESRASHKATA 186 (1007)
Q Consensus 124 ~~~p~~~~a~~~l~~~~l~i~~Li~ia~~~~~~~~-----------------~y~~a~~Il~l~~i~~~le~~~~~k~~~ 186 (1007)
+++||+++||+.+++++++||+|++++++++++++ +|.++.++++++++++|+|.++++|+++
T Consensus 1 ~g~~~~~~a~~~l~~~~~~md~l~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~le~~~~~~a~~ 80 (562)
T TIGR01511 1 AGRPFYKSAWKALRHKAPNMDTLIALGTTVAYGYSLVALLANQVLTGLHVHTFFDASAMLITFILLGRWLEMLAKGRASD 80 (562)
T ss_pred CcHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36899999999999999999999999999998863 2344567788999999999999999999
Q ss_pred HHHHhhccCCcceEEecC-C--EEeeCCCcccCcEEEEeCCCcccccEEEEeceeeeecccCCCCCeeeEecCCCeeeec
Q 001837 187 VMSSLMSIAPQKAIIAGT-G--EEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGKCEVDEKTLTGESYPVSKQKGSTVWAG 263 (1007)
Q Consensus 187 ~l~~L~~~~p~~~~V~rd-g--~~V~~~dLv~GDIV~L~~Ge~VPaDgiVl~G~~~VDES~LTGES~Pv~K~~g~~V~aG 263 (1007)
.+++|+++.|.+++++|+ | ++|++++|+|||+|+|++||+|||||+|++|++.||||+|||||.|+.|++|+.||+|
T Consensus 81 ~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~g~~~vdes~lTGEs~pv~k~~gd~V~aG 160 (562)
T TIGR01511 81 ALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIEGESEVDESLVTGESLPVPKKVGDPVIAG 160 (562)
T ss_pred HHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEECceEEehHhhcCCCCcEEcCCCCEEEee
Confidence 999999999999998875 4 7899999999999999999999999999999999999999999999999999999999
Q ss_pred eEEeeeeEEEEEEEEecceEEehhHHHHHHhhccchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHhcCCchhHHHHHHh
Q 001837 264 TINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLAL 343 (1007)
Q Consensus 264 T~v~~G~~~~~V~~tG~~T~~gki~~lv~~a~~~ks~lq~~~~~i~~~~~~i~l~ia~l~~l~~~~~~~~~~~~~~~~al 343 (1007)
|++.+|.++++|+++|.+|.+++|.+++++++.+++++++.+++++++|+|++++++++++++|+ .++.+++
T Consensus 161 t~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~--------~~~~~~~ 232 (562)
T TIGR01511 161 TVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWL--------FALEFAV 232 (562)
T ss_pred eEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999888877653 3688999
Q ss_pred hhhhhhccccchhhHHHHHHHHHHHHHHcCCcccchhhhhhccCccEEEecCccccccCceEEEEeecCCCCCCHHHHHH
Q 001837 344 VVLVSACPCALILSTPVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDINLNTLLY 423 (1007)
Q Consensus 344 ~vLv~a~P~aL~l~i~la~~~a~~~lak~gilvk~~~~lE~Lg~vd~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~lL~ 423 (1007)
++|+++|||+|++++|+++..++.+++++||++|++.++|+|+++|+||||||||||+|+|+|.++.+.++ .+.++++.
T Consensus 233 svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~-~~~~~~l~ 311 (562)
T TIGR01511 233 TVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFGD-RDRTELLA 311 (562)
T ss_pred HHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCCC-CCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999987653 56788999
Q ss_pred HHHhhhhcCCChHHHHHHHHhhhCCCCCCCCCcccceeccCCceEEEECCEEEEEecHHHHHHhCCCCCCCcCCcCCCCC
Q 001837 424 WVSSIESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFPGEGIYGKIGGEEIYIGNRKIAQRAGCGTVPSVDGPKMKGN 503 (1007)
Q Consensus 424 ~~asle~~s~hPi~~AIv~~a~~~~i~~~~~~~~~~~~~~g~Gi~~~i~g~~i~ig~~~~~~~~~~~~~~~~~~~~~~g~ 503 (1007)
+++++|..+.||+++||++++++.++.. ..+.++++++|.|+.+.++|+++.+|+++++.+.+.. ......+|.
T Consensus 312 ~aa~~e~~s~HPia~Ai~~~~~~~~~~~--~~~~~~~~~~g~Gi~~~~~g~~~~iG~~~~~~~~~~~----~~~~~~~g~ 385 (562)
T TIGR01511 312 LAAALEAGSEHPLAKAIVSYAKEKGITL--VEVSDFKAIPGIGVEGTVEGTKIQLGNEKLLGENAIK----IDGKAEQGS 385 (562)
T ss_pred HHHHHhccCCChHHHHHHHHHHhcCCCc--CCCCCeEEECCceEEEEECCEEEEEECHHHHHhCCCC----CChhhhCCC
Confidence 9999999999999999999998877643 3467888999999999999999999999998776544 123446788
Q ss_pred eEEEEEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEEeccCHhHHHHHHHHH
Q 001837 504 TIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQF 583 (1007)
Q Consensus 504 ~~i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~ar~sPeqK~~iV~~L 583 (1007)
++++++.|++++|++.++|++||+++++|++|++.|++++|+|||+..++..+++++||+ +|+++.|++|.++++.+
T Consensus 386 ~~~~~~~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~---~~~~~~p~~K~~~v~~l 462 (562)
T TIGR01511 386 TSVLVAVNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN---VRAEVLPDDKAALIKEL 462 (562)
T ss_pred EEEEEEECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc---EEccCChHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999996 89999999999999999
Q ss_pred hhCC-eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcCEEEecCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001837 584 KQEG-KTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAG 662 (1007)
Q Consensus 584 q~~G-~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aADiVLl~~~l~~I~~lI~~gR~~~~~i~~ni~~al~~ni~ 662 (1007)
++.+ .|+|||||.||++|+++|||||+|| .+++.+++.||++++++++..|+.+++++|+++++++||+.|+++||++
T Consensus 463 ~~~~~~v~~VGDg~nD~~al~~A~vgia~g-~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a~~~n~~ 541 (562)
T TIGR01511 463 QEKGRVVAMVGDGINDAPALAQADVGIAIG-AGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVI 541 (562)
T ss_pred HHcCCEEEEEeCCCccHHHHhhCCEEEEeC-CcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988 8999999999999999999999999 7899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhHH
Q 001837 663 IIALALGGHPL 673 (1007)
Q Consensus 663 ~i~la~~g~~~ 673 (1007)
+++++++|+.+
T Consensus 542 ~i~la~~~~~~ 552 (562)
T TIGR01511 542 AIPIAAGVLYP 552 (562)
T ss_pred HHHHHHhhhhc
Confidence 99999876643
No 7
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=2.6e-89 Score=818.78 Aligned_cols=532 Identities=42% Similarity=0.708 Sum_probs=502.2
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcceEEecCC--EEeeCCCcccCcEEE
Q 001837 143 INILVLIAVIGTIAMNDYIEAGIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAIIAGTG--EEVDAGEVKLNTVLA 220 (1007)
Q Consensus 143 i~~Li~ia~~~~~~~~~y~~a~~Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~~~~V~rdg--~~V~~~dLv~GDIV~ 220 (1007)
+|+|++++++.++++++|+++.+++++++++.+++.++++|+.+.+++|.++.|.+++|+|+| ++|++++|+|||+|.
T Consensus 1 ~~~l~~~a~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~GDiv~ 80 (536)
T TIGR01512 1 VDLLMALAALGAVAIGEYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVGDVVV 80 (536)
T ss_pred CcHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCCCCEEE
Confidence 478899999999999999999999999999999999999999999999999999999999998 799999999999999
Q ss_pred EeCCCcccccEEEEeceeeeecccCCCCCeeeEecCCCeeeeceEEeeeeEEEEEEEEecceEEehhHHHHHHhhccchH
Q 001837 221 VKAGEVIPIDGIVVDGKCEVDEKTLTGESYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSR 300 (1007)
Q Consensus 221 L~~Ge~VPaDgiVl~G~~~VDES~LTGES~Pv~K~~g~~V~aGT~v~~G~~~~~V~~tG~~T~~gki~~lv~~a~~~ks~ 300 (1007)
|++||+|||||+|++|++.||||+|||||.|+.|++|+.||+||.+.+|.++++|+++|.+|.+|++.+++.+++.++++
T Consensus 81 v~~G~~iP~Dg~ii~g~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~~~~~~~~ 160 (536)
T TIGR01512 81 VKPGERVPVDGVVLSGTSTVDESALTGESVPVEKAPGDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQSRKAK 160 (536)
T ss_pred EcCCCEeecceEEEeCcEEEEecccCCCCCcEEeCCCCEEEeeeEECCceEEEEEEEeccccHHHHHHHHHHHHhhCCCh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhHhHHHHHHHHHHHHHHHHhcCCchhHHHHHHhhhhhhhccccchhhHHHHHHHHHHHHHHcCCcccchh
Q 001837 301 IQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCALTKAATSGLLIKGGD 380 (1007)
Q Consensus 301 lq~~~~~i~~~~~~i~l~ia~l~~l~~~~~~~~~~~~~~~~al~vLv~a~P~aL~l~i~la~~~a~~~lak~gilvk~~~ 380 (1007)
+++.++++++++++++++++++++++++++.. +..++.+++++++++|||+|++++|+++..++.+++++||++|+++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~gilik~~~ 238 (536)
T TIGR01512 161 TQRFIDRFARYYTPVVLAIALAIWLVPGLLKR--WPFWVYRALVLLVVASPCALVISAPAAYLSAISAAARHGILIKGGA 238 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--cHHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHCCeEEcCcH
Confidence 99999999999999999999888887766542 2347888999999999999999999999999999999999999999
Q ss_pred hhhhccCccEEEecCccccccCceEEEEeecCCCCCCHHHHHHHHHhhhhcCCChHHHHHHHHhhhCCCCCCCCCcccce
Q 001837 381 YLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDINLNTLLYWVSSIESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQ 460 (1007)
Q Consensus 381 ~lE~Lg~vd~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~lL~~~asle~~s~hPi~~AIv~~a~~~~i~~~~~~~~~~~ 460 (1007)
++|+++++|++|||||||||+|+|+|.++.+ .+++.+++++|..+.||+++||++++++.+ ..++++
T Consensus 239 ~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~-------~~~l~~a~~~e~~~~hp~~~Ai~~~~~~~~------~~~~~~ 305 (536)
T TIGR01512 239 ALEALAKIKTVAFDKTGTLTTGRPKVVDVVP-------AEVLRLAAAAEQASSHPLARAIVDYARKRE------NVESVE 305 (536)
T ss_pred HHHhhcCCCEEEECCCCCCcCCceEEEEeeH-------HHHHHHHHHHhccCCCcHHHHHHHHHHhcC------CCcceE
Confidence 9999999999999999999999999999875 368888899999999999999999998764 355678
Q ss_pred eccCCceEEEECCEEEEEecHHHHHHhCCCCCCCcCCcCCCCCeEEEEEECCEEEEEEEecCcccccHHHHHHHHHHCCC
Q 001837 461 NFPGEGIYGKIGGEEIYIGNRKIAQRAGCGTVPSVDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGI 540 (1007)
Q Consensus 461 ~~~g~Gi~~~i~g~~i~ig~~~~~~~~~~~~~~~~~~~~~~g~~~i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGI 540 (1007)
+.++.|+.+.++|.++.+|+++++.+.+.. .+..+|.+++++++|+.++|.+.++|++||+++++|++|+++|+
T Consensus 306 ~~~g~gi~~~~~g~~~~ig~~~~~~~~~~~------~~~~~~~~~~~v~~~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi 379 (536)
T TIGR01512 306 EVPGEGVRAVVDGGEVRIGNPRSLEAAVGA------RPESAGKTIVHVARDGTYLGYILLSDEPRPDAAEAIAELKALGI 379 (536)
T ss_pred EecCCeEEEEECCeEEEEcCHHHHhhcCCc------chhhCCCeEEEEEECCEEEEEEEEeccchHHHHHHHHHHHHcCC
Confidence 889999999999999999999998655432 34456788999999999999999999999999999999999999
Q ss_pred -eEEEEcCCCHHHHHHHHHHhCCCcceEEeccCHhHHHHHHHHHhhCC-eEEEEcCCccCHHHHhhCCeeEEeCCCCcHH
Q 001837 541 -RTAMLTGDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEG-KTAMIGDGINDAPALATADIGISMGISGSAL 618 (1007)
Q Consensus 541 -kv~mlTGD~~~tA~~vA~~lGI~~~~V~ar~sPeqK~~iV~~Lq~~G-~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~ 618 (1007)
+++|+|||+..++..+++++|++ .+|+++.|++|..+++.+++.+ .|+|||||.||++|+++||+||++|..+++.
T Consensus 380 ~~v~vvTgd~~~~a~~i~~~lgi~--~~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~ 457 (536)
T TIGR01512 380 EKVVMLTGDRRAVAERVARELGID--EVHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDV 457 (536)
T ss_pred CcEEEEcCCCHHHHHHHHHHcCCh--hhhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHH
Confidence 99999999999999999999998 9999999999999999999988 8999999999999999999999999668899
Q ss_pred HHhhcCEEEecCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhhhhcc
Q 001837 619 ATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAGIIALALGGHPLVWAAVLADVGTCLIVILNSMLLLH 697 (1007)
Q Consensus 619 A~~aADiVLl~~~l~~I~~lI~~gR~~~~~i~~ni~~al~~ni~~i~la~~g~~~~~~ail~~~~s~l~vvlNSlrll~ 697 (1007)
+++.||++++++++..|.+++.+||++++++++|+.|+++||+++++++++|+++||.|.+.+.++++++++||+|+++
T Consensus 458 ~~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~~G~~~p~~aa~~m~~ss~~v~~ns~r~~~ 536 (536)
T TIGR01512 458 AIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGIILLLILLALFGVLPLWLAVLGHEGSTVLVILNALRLLR 536 (536)
T ss_pred HHHhCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHcChHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999863
No 8
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=4.6e-88 Score=812.29 Aligned_cols=544 Identities=42% Similarity=0.678 Sum_probs=505.4
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcceEEecCC---EEeeCCCcccCcEE
Q 001837 143 INILVLIAVIGTIAMNDYIEAGIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAIIAGTG---EEVDAGEVKLNTVL 219 (1007)
Q Consensus 143 i~~Li~ia~~~~~~~~~y~~a~~Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~~~~V~rdg---~~V~~~dLv~GDIV 219 (1007)
||+|+.++++.+++++.|.++.+++++++++.+++.++++|+++.+++|.+..|..++++|+| ++|++++|+|||+|
T Consensus 1 ~d~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~GDiv 80 (556)
T TIGR01525 1 MDLLMALATIAAYAMGLVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQVGDIV 80 (556)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEE
Confidence 578999999999999999999999999999999999999999999999999999999999984 68999999999999
Q ss_pred EEeCCCcccccEEEEeceeeeecccCCCCCeeeEecCCCeeeeceEEeeeeEEEEEEEEecceEEehhHHHHHHhhccch
Q 001837 220 AVKAGEVIPIDGIVVDGKCEVDEKTLTGESYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKS 299 (1007)
Q Consensus 220 ~L~~Ge~VPaDgiVl~G~~~VDES~LTGES~Pv~K~~g~~V~aGT~v~~G~~~~~V~~tG~~T~~gki~~lv~~a~~~ks 299 (1007)
+|++||+|||||+|++|++.||||+|||||.|+.|++|+.||+||.+.+|.++++|+++|.+|.+|+|.+++.+++.+++
T Consensus 81 ~v~~G~~iP~Dg~vi~g~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~ 160 (556)
T TIGR01525 81 IVRPGERIPVDGVVISGESEVDESALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEEAQSSKA 160 (556)
T ss_pred EECCCCEeccceEEEecceEEeehhccCCCCCEecCCcCEEeeceEECCceEEEEEEEecccCHHHHHHHHHHHHhhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHhHHHHHHHHHHHHHHHHhcCCchhHHHHHHhhhhhhhccccchhhHHHHHHHHHHHHHHcCCcccch
Q 001837 300 RIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCALTKAATSGLLIKGG 379 (1007)
Q Consensus 300 ~lq~~~~~i~~~~~~i~l~ia~l~~l~~~~~~~~~~~~~~~~al~vLv~a~P~aL~l~i~la~~~a~~~lak~gilvk~~ 379 (1007)
++++.++++++++++++++++++++++|++.... ..+.+++++++++|||+|++++|+++..++.+++++|+++|++
T Consensus 161 ~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~~~---~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gilvk~~ 237 (556)
T TIGR01525 161 PIQRLADRIASYYVPAVLAIALLTFVVWLALGAL---GALYRALAVLVVACPCALGLATPVAILVAIGVAARRGILIKGG 237 (556)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---hHHHHHHHHHhhccccchhehhHHHHHHHHHHHHHCCceecCc
Confidence 9999999999999999999999998887765532 6788999999999999999999999999999999999999999
Q ss_pred hhhhhccCccEEEecCccccccCceEEEEeecCCCCC-CHHHHHHHHHhhhhcCCChHHHHHHHHhhhCCCCCCCCCcc-
Q 001837 380 DYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDI-NLNTLLYWVSSIESKSSHPMSAALVEYGRSLSIEPKPEDVE- 457 (1007)
Q Consensus 380 ~~lE~Lg~vd~I~fDKTGTLT~g~~~v~~i~~~~~~~-~~~~lL~~~asle~~s~hPi~~AIv~~a~~~~i~~~~~~~~- 457 (1007)
+++|+|+++|++|||||||||+|+|+|.++...++.. +.++++.++++++..+.||+++||++++++.+++... .
T Consensus 238 ~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~~~~~~~l~~a~~~e~~~~hp~~~Ai~~~~~~~~~~~~~---~~ 314 (556)
T TIGR01525 238 DALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDASISEEELLALAAALEQSSSHPLARAIVRYAKKRGLELPK---QE 314 (556)
T ss_pred hHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCCccHHHHHHHHHHHhccCCChHHHHHHHHHHhcCCCccc---cc
Confidence 9999999999999999999999999999998664322 2677888899999999999999999999987765422 3
Q ss_pred cceeccCCceEEEECC-EEEEEecHHHHHHhCCCCC---CCcCCcCCCCCeEEEEEECCEEEEEEEecCcccccHHHHHH
Q 001837 458 DYQNFPGEGIYGKIGG-EEIYIGNRKIAQRAGCGTV---PSVDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVN 533 (1007)
Q Consensus 458 ~~~~~~g~Gi~~~i~g-~~i~ig~~~~~~~~~~~~~---~~~~~~~~~g~~~i~v~~d~~~lGli~l~D~lR~~a~eaI~ 533 (1007)
+++++++.|+.+.++| .++.+|++++++....... ...+.+..+|.++++++.|++++|.+.++|++||+++++|+
T Consensus 315 ~~~~~~~~gi~~~~~g~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~g~i~~~d~~~~g~~e~l~ 394 (556)
T TIGR01525 315 DVEEVPGKGVEATVDGQEEVRIGNPRLLELAAEPISASPDLLNEGESQGKTVVFVAVDGELLGVIALRDQLRPEAKEAIA 394 (556)
T ss_pred CeeEecCCeEEEEECCeeEEEEecHHHHhhcCCCchhhHHHHHHHhhCCcEEEEEEECCEEEEEEEecccchHhHHHHHH
Confidence 6677899999999999 8999999998733222210 11233456789999999999999999999999999999999
Q ss_pred HHHHCC-CeEEEEcCCCHHHHHHHHHHhCCCcceEEeccCHhHHHHHHHHHhhCC-eEEEEcCCccCHHHHhhCCeeEEe
Q 001837 534 QLKSLG-IRTAMLTGDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEG-KTAMIGDGINDAPALATADIGISM 611 (1007)
Q Consensus 534 ~Lr~aG-Ikv~mlTGD~~~tA~~vA~~lGI~~~~V~ar~sPeqK~~iV~~Lq~~G-~VamVGDG~NDa~ALk~ADVGIAm 611 (1007)
+|+++| ++++|+|||+..++..+++++|+. .+|+++.|++|.++++.+++.| .|+|||||.||++|+++|||||++
T Consensus 395 ~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~--~~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~ 472 (556)
T TIGR01525 395 ALKRAGGIKLVMLTGDNRSAAEAVAAELGID--EVHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAM 472 (556)
T ss_pred HHHHcCCCeEEEEeCCCHHHHHHHHHHhCCC--eeeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEe
Confidence 999999 999999999999999999999998 9999999999999999999887 899999999999999999999999
Q ss_pred CCCCcHHHHhhcCEEEecCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH-HHHHHHHHHHHHHHH
Q 001837 612 GISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAGIIALALGGHPLVW-AAVLADVGTCLIVIL 690 (1007)
Q Consensus 612 g~~gs~~A~~aADiVLl~~~l~~I~~lI~~gR~~~~~i~~ni~~al~~ni~~i~la~~g~~~~~-~ail~~~~s~l~vvl 690 (1007)
| .+++.+++.||+++.++++..|++++++||++++++++|+.|+++||+++++++++|+.+|| .+.+.|.++++++++
T Consensus 473 g-~~~~~~~~~Ad~vi~~~~~~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~~g~~~p~~~aa~~m~~ss~~v~l 551 (556)
T TIGR01525 473 G-AGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAAGGLLPLWLLAVLLHEGSTVLVVL 551 (556)
T ss_pred C-CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHhchHHHHHH
Confidence 9 78999999999999999999999999999999999999999999999999999999999997 999999999999999
Q ss_pred hhhhh
Q 001837 691 NSMLL 695 (1007)
Q Consensus 691 NSlrl 695 (1007)
||+|+
T Consensus 552 ns~r~ 556 (556)
T TIGR01525 552 NSLRL 556 (556)
T ss_pred HhhcC
Confidence 99985
No 9
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=8.9e-88 Score=841.55 Aligned_cols=576 Identities=21% Similarity=0.280 Sum_probs=472.7
Q ss_pred ccccccccccccccCCCchHHHHHHHHHHHHHHHHhhhhHHHHHHHhhhhchHHHHHHHHHHHHcCcccHHHHHHHHHHH
Q 001837 74 EANVRAYGGTSYQKKWPSPYAMACGVLLAISILKYVYHPLRWFALGAVAIGIFPIILKGLAAIRNFKLDINILVLIAVIG 153 (1007)
Q Consensus 74 ~as~~~~g~~~~~~~~~~~~~~~~gill~isl~~~~~~~l~~l~l~~~~~~~~p~~~~a~~~l~~~~l~i~~Li~ia~~~ 153 (1007)
..+...+|+|....+.+.+++.. ++..|.+|+.|+++++.++
T Consensus 74 ~~r~~~~G~N~l~~~~~~s~~~~--------~~~~~~~p~~~lL~~aa~l------------------------------ 115 (902)
T PRK10517 74 ESAREQHGENELPAQKPLPWWVH--------LWVCYRNPFNILLTILGAI------------------------------ 115 (902)
T ss_pred HHHHHhcCCCCCCCCCCCCHHHH--------HHHHHHhHHHHHHHHHHHH------------------------------
Confidence 34566789998877766665532 4566677777655443322
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcceEEecC------C--EEeeCCCcccCcEEEEeCCC
Q 001837 154 TIAMNDYIEAGIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAIIAGT------G--EEVDAGEVKLNTVLAVKAGE 225 (1007)
Q Consensus 154 ~~~~~~y~~a~~Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~~~~V~rd------g--~~V~~~dLv~GDIV~L~~Ge 225 (1007)
++++++|.++++|+++++++.+++.++++|+++.+++|.++.+.+++|+|+ | ++|+++||||||+|.|++||
T Consensus 116 s~~~~~~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd 195 (902)
T PRK10517 116 SYATEDLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGD 195 (902)
T ss_pred HHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCC
Confidence 334578889999999999999999999999999999999999999999998 5 68999999999999999999
Q ss_pred cccccEEEEece-eeeecccCCCCCeeeEecCCC-------------eeeeceEEeeeeEEEEEEEEecceEEehhHHHH
Q 001837 226 VIPIDGIVVDGK-CEVDEKTLTGESYPVSKQKGS-------------TVWAGTINLNGYISVETTAVAEDCVVAKMAKLV 291 (1007)
Q Consensus 226 ~VPaDgiVl~G~-~~VDES~LTGES~Pv~K~~g~-------------~V~aGT~v~~G~~~~~V~~tG~~T~~gki~~lv 291 (1007)
+|||||+|++|+ +.||||+|||||.|+.|.+++ .||+||.|.+|.++++|++||.+|.+|+|.+++
T Consensus 196 ~IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v 275 (902)
T PRK10517 196 MIPADLRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRV 275 (902)
T ss_pred EEeeeEEEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHh
Confidence 999999999996 799999999999999998764 799999999999999999999999999999999
Q ss_pred HHhhccchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHhcCCchhHHHHHHhhhhhhhccccchhhHHHHHHHHHHHHHH
Q 001837 292 EEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCALTKAAT 371 (1007)
Q Consensus 292 ~~a~~~ks~lq~~~~~i~~~~~~i~l~ia~l~~l~~~~~~~~~~~~~~~~al~vLv~a~P~aL~l~i~la~~~a~~~lak 371 (1007)
.+++.+++|+|+.++++++++.+++++++.++++++++.. .++...+.+++++++++|||+||++++++++.++.+|++
T Consensus 276 ~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~~-~~~~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~mak 354 (902)
T PRK10517 276 SEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYTK-GDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSK 354 (902)
T ss_pred hccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhc-CCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHh
Confidence 9988899999999999999999888888877776655443 467778889999999999999999999999999999999
Q ss_pred cCCcccchhhhhhccCccEEEecCccccccCceEEEEeecCCCCCCHHHHHHHHHh---hhhcCCChHHHHHHHHhhhCC
Q 001837 372 SGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDINLNTLLYWVSS---IESKSSHPMSAALVEYGRSLS 448 (1007)
Q Consensus 372 ~gilvk~~~~lE~Lg~vd~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~lL~~~as---le~~s~hPi~~AIv~~a~~~~ 448 (1007)
+|+++|+++++|+||++|+||||||||||+|+|+|..+..... .+.++++.+++. .+...+||++.|+++++...+
T Consensus 355 ~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~~-~~~~~ll~~a~l~~~~~~~~~~p~d~All~~a~~~~ 433 (902)
T PRK10517 355 QKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDISG-KTSERVLHSAWLNSHYQTGLKNLLDTAVLEGVDEES 433 (902)
T ss_pred CCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCCC-CCHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999999998754322 344566665543 223468999999999986543
Q ss_pred CCCCCCCcccceecc----CCceEEEE---CC--EEEEEecHHHHHHhCCC------CCC-----------CcCCcCCCC
Q 001837 449 IEPKPEDVEDYQNFP----GEGIYGKI---GG--EEIYIGNRKIAQRAGCG------TVP-----------SVDGPKMKG 502 (1007)
Q Consensus 449 i~~~~~~~~~~~~~~----g~Gi~~~i---~g--~~i~ig~~~~~~~~~~~------~~~-----------~~~~~~~~g 502 (1007)
............++| .+++...+ ++ ..+..|.++.+...... ..+ ..+++..+|
T Consensus 434 ~~~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G 513 (902)
T PRK10517 434 ARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQG 513 (902)
T ss_pred hhhhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcC
Confidence 111111222222333 23344333 22 23445777654321100 000 023355678
Q ss_pred CeEEEEEE----------------CCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc-
Q 001837 503 NTIGYIFS----------------GASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN- 565 (1007)
Q Consensus 503 ~~~i~v~~----------------d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~- 565 (1007)
.+++.++. |++|+|+++|+||+||+++++|++|+++||+++|+|||++.||.++|+++||..+
T Consensus 514 ~rvlavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~ 593 (902)
T PRK10517 514 LRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDAGE 593 (902)
T ss_pred CEEEEEEEecCCccccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCccC
Confidence 88888763 6799999999999999999999999999999999999999999999999999632
Q ss_pred ----------------------eEEeccCHhHHHHHHHHHhhCC-eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhh
Q 001837 566 ----------------------VVHSELLPEDKAKIINQFKQEG-KTAMIGDGINDAPALATADIGISMGISGSALATET 622 (1007)
Q Consensus 566 ----------------------~V~ar~sPeqK~~iV~~Lq~~G-~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~a 622 (1007)
.||||++|+||.++|+.||+.| +|+|+|||+||+|||++|||||||| +|+++|+++
T Consensus 594 v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg-~gtdvAkea 672 (902)
T PRK10517 594 VLIGSDIETLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVD-GAVDIAREA 672 (902)
T ss_pred ceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeC-CcCHHHHHh
Confidence 7999999999999999999999 8999999999999999999999999 999999999
Q ss_pred cCEEEecCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----h------hHHHHHHHHHHHHHHHHHHHh
Q 001837 623 GQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAGIIALALG-----G------HPLVWAAVLADVGTCLIVILN 691 (1007)
Q Consensus 623 ADiVLl~~~l~~I~~lI~~gR~~~~~i~~ni~~al~~ni~~i~la~~-----g------~~~~~~ail~~~~s~l~vvlN 691 (1007)
||+||+++||..|+.++++||++|+|+++++.|.+..|+..++..++ . .+.+|+++++| ++++.+...
T Consensus 673 ADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D-~~~~al~~d 751 (902)
T PRK10517 673 ADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYD-VSQVAIPFD 751 (902)
T ss_pred CCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHH-HhHHhhcCC
Confidence 99999999999999999999999999999999999999864332222 1 23578888888 555555543
No 10
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=2e-87 Score=839.58 Aligned_cols=587 Identities=20% Similarity=0.285 Sum_probs=472.1
Q ss_pred ccccccccccccccccCCCchHHHHHHHHHHHHHHHHhhhhHHHHHHHhhhhchHHHHHHHHHHHHcCcccHHHHHHHHH
Q 001837 72 RFEANVRAYGGTSYQKKWPSPYAMACGVLLAISILKYVYHPLRWFALGAVAIGIFPIILKGLAAIRNFKLDINILVLIAV 151 (1007)
Q Consensus 72 Gy~as~~~~g~~~~~~~~~~~~~~~~gill~isl~~~~~~~l~~l~l~~~~~~~~p~~~~a~~~l~~~~l~i~~Li~ia~ 151 (1007)
+.+.+...+|+|....+.+.+++. .|+..|.+|+.|+++++.+++++- ..|....++
T Consensus 50 ea~~rl~~~G~N~l~~~~~~~~~~--------~~l~~f~~~~~~iL~~aa~ls~~~---~~~~~~~~~------------ 106 (903)
T PRK15122 50 DAAERLQRYGPNEVAHEKPPHALV--------QLLQAFNNPFIYVLMVLAAISFFT---DYWLPLRRG------------ 106 (903)
T ss_pred HHHHHHHhcCCCCCCCCCCCCHHH--------HHHHHHHhHHHHHHHHHHHHHHHH---HHHhhccCC------------
Confidence 334556778999887666555543 245666777777666554443211 000000000
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcceEEecC------C--EEeeCCCcccCcEEEEeC
Q 001837 152 IGTIAMNDYIEAGIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAIIAGT------G--EEVDAGEVKLNTVLAVKA 223 (1007)
Q Consensus 152 ~~~~~~~~y~~a~~Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~~~~V~rd------g--~~V~~~dLv~GDIV~L~~ 223 (1007)
-.++|.++++|+++++++.+++.++++++++.+++|.++.+..++|+|+ | ++|++++|+|||+|.|++
T Consensus 107 ----~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~ 182 (903)
T PRK15122 107 ----EETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSA 182 (903)
T ss_pred ----ccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECC
Confidence 0135788888999999999999999999999999999999999999998 3 789999999999999999
Q ss_pred CCcccccEEEEece-eeeecccCCCCCeeeEecC-----------------------CCeeeeceEEeeeeEEEEEEEEe
Q 001837 224 GEVIPIDGIVVDGK-CEVDEKTLTGESYPVSKQK-----------------------GSTVWAGTINLNGYISVETTAVA 279 (1007)
Q Consensus 224 Ge~VPaDgiVl~G~-~~VDES~LTGES~Pv~K~~-----------------------g~~V~aGT~v~~G~~~~~V~~tG 279 (1007)
||+|||||+|++|. +.||||+|||||.|+.|.+ +|.||+||.|.+|.++++|++||
T Consensus 183 Gd~IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG 262 (903)
T PRK15122 183 GDMIPADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATG 262 (903)
T ss_pred CCEEeeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEec
Confidence 99999999999997 6999999999999999975 37899999999999999999999
Q ss_pred cceEEehhHHHHHHhhccchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHhcCCchhHHHHHHhhhhhhhccccchhhHH
Q 001837 280 EDCVVAKMAKLVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTP 359 (1007)
Q Consensus 280 ~~T~~gki~~lv~~a~~~ks~lq~~~~~i~~~~~~i~l~ia~l~~l~~~~~~~~~~~~~~~~al~vLv~a~P~aL~l~i~ 359 (1007)
.+|.+|+|.+++.+ +..++++++.++++.+++..+.++++.+++++.++.. .++..++.+++++++++|||+||++++
T Consensus 263 ~~T~~gkI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~~-~~~~~~l~~aisl~V~~~Pe~Lp~~vt 340 (903)
T PRK15122 263 SRTYFGSLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFTK-GDWLEALLFALAVAVGLTPEMLPMIVS 340 (903)
T ss_pred cccHhhHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc-CCHHHHHHHHHHHHHHHccchHHHHHH
Confidence 99999999999887 6667899999999999887776666655555443333 467778899999999999999999999
Q ss_pred HHHHHHHHHHHHcCCcccchhhhhhccCccEEEecCccccccCceEEEEeecCCCCCCHHHHHHHHHh---hhhcCCChH
Q 001837 360 VVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDINLNTLLYWVSS---IESKSSHPM 436 (1007)
Q Consensus 360 la~~~a~~~lak~gilvk~~~~lE~Lg~vd~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~lL~~~as---le~~s~hPi 436 (1007)
++++.++.+|+++|+++|++.++|+||++|+||||||||||+|+|+|.+++..++ .+.++++.+++. .+..++||+
T Consensus 341 ~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~-~~~~~~l~~a~l~s~~~~~~~~p~ 419 (903)
T PRK15122 341 SNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSG-RKDERVLQLAWLNSFHQSGMKNLM 419 (903)
T ss_pred HHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCC-CChHHHHHHHHHhCCCCCCCCChH
Confidence 9999999999999999999999999999999999999999999999999876543 334556665432 234468999
Q ss_pred HHHHHHHhhhCCCCCCCCCcccceeccCCceEEEE-------CCEEEEE--ecHHHHHHhCC-------C-CCC------
Q 001837 437 SAALVEYGRSLSIEPKPEDVEDYQNFPGEGIYGKI-------GGEEIYI--GNRKIAQRAGC-------G-TVP------ 493 (1007)
Q Consensus 437 ~~AIv~~a~~~~i~~~~~~~~~~~~~~g~Gi~~~i-------~g~~i~i--g~~~~~~~~~~-------~-~~~------ 493 (1007)
+.||++++...+............++|+.+..... +++.+.+ |+++.+..... . .+.
T Consensus 420 e~All~~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~ 499 (903)
T PRK15122 420 DQAVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRER 499 (903)
T ss_pred HHHHHHHHHHcCchhhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHH
Confidence 99999999876643212233455666776654332 4554444 88775422110 0 000
Q ss_pred ---CcCCcCCCCCeEEEEEE------------------CCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHH
Q 001837 494 ---SVDGPKMKGNTIGYIFS------------------GASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSA 552 (1007)
Q Consensus 494 ---~~~~~~~~g~~~i~v~~------------------d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~t 552 (1007)
..+++..+|.++++++. |++|+|+++|+||+||+++++|++|+++||+++|+|||++.|
T Consensus 500 i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~t 579 (903)
T PRK15122 500 LLALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIV 579 (903)
T ss_pred HHHHHHHHHhCCCEEEEEEEeccCccccccccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHH
Confidence 12345567888887763 568999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCcc-----------------------eEEeccCHhHHHHHHHHHhhCC-eEEEEcCCccCHHHHhhCCee
Q 001837 553 AMQAQEQLGNALN-----------------------VVHSELLPEDKAKIINQFKQEG-KTAMIGDGINDAPALATADIG 608 (1007)
Q Consensus 553 A~~vA~~lGI~~~-----------------------~V~ar~sPeqK~~iV~~Lq~~G-~VamVGDG~NDa~ALk~ADVG 608 (1007)
|.++|+++||..+ .||||++|+||.++|+.||+.| +|+|+|||+||+|||++||||
T Consensus 580 A~aIA~~lGI~~~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVG 659 (903)
T PRK15122 580 TAKICREVGLEPGEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVG 659 (903)
T ss_pred HHHHHHHcCCCCCCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEE
Confidence 9999999999621 6999999999999999999999 899999999999999999999
Q ss_pred EEeCCCCcHHHHhhcCEEEecCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hh------hHHHHHH
Q 001837 609 ISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAGIIALAL-----GG------HPLVWAA 677 (1007)
Q Consensus 609 IAmg~~gs~~A~~aADiVLl~~~l~~I~~lI~~gR~~~~~i~~ni~~al~~ni~~i~la~-----~g------~~~~~~a 677 (1007)
|||| +|+++|+++||+||+++||..|+.++++||++|+|+++++.|.+..|+..+++.+ ++ .+.+|.+
T Consensus 660 IAmg-~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~~n 738 (903)
T PRK15122 660 ISVD-SGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLLLQN 738 (903)
T ss_pred EEeC-cccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHHHHH
Confidence 9999 8999999999999999999999999999999999999999999999875332222 11 1356777
Q ss_pred HHHHHHHHHHHHH
Q 001837 678 VLADVGTCLIVIL 690 (1007)
Q Consensus 678 il~~~~s~l~vvl 690 (1007)
+++|. +++.+..
T Consensus 739 li~D~-~~lal~~ 750 (903)
T PRK15122 739 LMYDI-SQLSLPW 750 (903)
T ss_pred HHHHH-HHHhhcC
Confidence 77773 5555444
No 11
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=2.3e-87 Score=837.97 Aligned_cols=576 Identities=19% Similarity=0.258 Sum_probs=471.1
Q ss_pred ccccccccccccccccCCCchHHHHHHHHHHHHHHHHhhhhHHHHHHHhhhhchHHHHHHHHHHHHcCcccHHHHHHHHH
Q 001837 72 RFEANVRAYGGTSYQKKWPSPYAMACGVLLAISILKYVYHPLRWFALGAVAIGIFPIILKGLAAIRNFKLDINILVLIAV 151 (1007)
Q Consensus 72 Gy~as~~~~g~~~~~~~~~~~~~~~~gill~isl~~~~~~~l~~l~l~~~~~~~~p~~~~a~~~l~~~~l~i~~Li~ia~ 151 (1007)
+...+...+|+|....+.+.+++.. ++..|.+|+.|+++++.++
T Consensus 38 ev~~r~~~~G~N~l~~~~~~~~~~~--------~~~~~~~p~~~iL~~~a~l---------------------------- 81 (867)
T TIGR01524 38 EVTERLAEFGPNQTVEEKKVPNLRL--------LIRAFNNPFIYILAMLMGV---------------------------- 81 (867)
T ss_pred HHHHHHHhcCCCcCCCCCCCCHHHH--------HHHHHhhHHHHHHHHHHHH----------------------------
Confidence 3344566788888776655544432 4555667777665444333
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcceEEec------CC--EEeeCCCcccCcEEEEeC
Q 001837 152 IGTIAMNDYIEAGIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAIIAG------TG--EEVDAGEVKLNTVLAVKA 223 (1007)
Q Consensus 152 ~~~~~~~~y~~a~~Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~~~~V~r------dg--~~V~~~dLv~GDIV~L~~ 223 (1007)
++++++|+++++|+++++++.+++.++++|+++.+++|.++.+..++|+| || ++|+++||+|||+|.|++
T Consensus 82 --s~~~~~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~ 159 (867)
T TIGR01524 82 --SYLTDDLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAA 159 (867)
T ss_pred --HHHHhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECC
Confidence 23346788899999999999999999999999999999999999999999 78 799999999999999999
Q ss_pred CCcccccEEEEece-eeeecccCCCCCeeeEecCCC-------------eeeeceEEeeeeEEEEEEEEecceEEehhHH
Q 001837 224 GEVIPIDGIVVDGK-CEVDEKTLTGESYPVSKQKGS-------------TVWAGTINLNGYISVETTAVAEDCVVAKMAK 289 (1007)
Q Consensus 224 Ge~VPaDgiVl~G~-~~VDES~LTGES~Pv~K~~g~-------------~V~aGT~v~~G~~~~~V~~tG~~T~~gki~~ 289 (1007)
||+|||||+|++|+ +.||||+|||||.|+.|.+++ .+|+||.|.+|.++++|++||.+|.+|+|.+
T Consensus 160 Gd~VPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~ 239 (867)
T TIGR01524 160 GDIIPADARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAI 239 (867)
T ss_pred CCEEcccEEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHH
Confidence 99999999999997 799999999999999998864 6999999999999999999999999999999
Q ss_pred HHHHhhccchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHhcCCchhHHHHHHhhhhhhhccccchhhHHHHHHHHHHHH
Q 001837 290 LVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCALTKA 369 (1007)
Q Consensus 290 lv~~a~~~ks~lq~~~~~i~~~~~~i~l~ia~l~~l~~~~~~~~~~~~~~~~al~vLv~a~P~aL~l~i~la~~~a~~~l 369 (1007)
++.+ +.+++|+|+.++++++++.++++++++++++++++.. .++..++.++++++++++||+||++++++++.++.+|
T Consensus 240 ~v~~-~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~m 317 (867)
T TIGR01524 240 AATE-RRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLMK-GDWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINM 317 (867)
T ss_pred HhhC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHHhc-CCHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHH
Confidence 9988 6778999999999999999988888877776655443 4677788999999999999999999999999999999
Q ss_pred HHcCCcccchhhhhhccCccEEEecCccccccCceEEEEeecCCCCCCHHHHHHHHH---hhhhcCCChHHHHHHHHhhh
Q 001837 370 ATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDINLNTLLYWVS---SIESKSSHPMSAALVEYGRS 446 (1007)
Q Consensus 370 ak~gilvk~~~~lE~Lg~vd~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~lL~~~a---sle~~s~hPi~~AIv~~a~~ 446 (1007)
+++|+++|++.++|+||++|+||||||||||+|+|+|.++....+ .+.++++.+++ ..+..++||++.|+++++..
T Consensus 318 ak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~-~~~~~~l~~a~l~~~~~~~~~~p~~~Al~~~~~~ 396 (867)
T TIGR01524 318 SKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSG-ETSERVLKMAWLNSYFQTGWKNVLDHAVLAKLDE 396 (867)
T ss_pred HhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCC-CCHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999875432 34556666554 22334579999999999865
Q ss_pred CCCCCCCCCcccceecc----CCceEEEECC-----EEEEEecHHHHHHhCCCC--------C---------CCcCCcCC
Q 001837 447 LSIEPKPEDVEDYQNFP----GEGIYGKIGG-----EEIYIGNRKIAQRAGCGT--------V---------PSVDGPKM 500 (1007)
Q Consensus 447 ~~i~~~~~~~~~~~~~~----g~Gi~~~i~g-----~~i~ig~~~~~~~~~~~~--------~---------~~~~~~~~ 500 (1007)
...............+| .+++...+++ ..+..|.++.+....... + ...+++..
T Consensus 397 ~~~~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~ 476 (867)
T TIGR01524 397 SAARQTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNR 476 (867)
T ss_pred hchhhHhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHHh
Confidence 42111111222233333 3555554432 235567776653211100 0 01234556
Q ss_pred CCCeEEEEEE----------------CCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc
Q 001837 501 KGNTIGYIFS----------------GASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL 564 (1007)
Q Consensus 501 ~g~~~i~v~~----------------d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~ 564 (1007)
+|.+++.++. +++|+|+++|+||+|++++++|++|+++||+++|+|||++.||.++|+++||..
T Consensus 477 ~G~rvlavA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~ 556 (867)
T TIGR01524 477 QGIRVIAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA 556 (867)
T ss_pred cCCEEEEEEEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC
Confidence 7888888775 358999999999999999999999999999999999999999999999999973
Q ss_pred c-----------------------eEEeccCHhHHHHHHHHHhhCC-eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHH
Q 001837 565 N-----------------------VVHSELLPEDKAKIINQFKQEG-KTAMIGDGINDAPALATADIGISMGISGSALAT 620 (1007)
Q Consensus 565 ~-----------------------~V~ar~sPeqK~~iV~~Lq~~G-~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~ 620 (1007)
+ .||||++|+||.++|+.||++| .|+|+|||+||+|||++|||||||| +|+++|+
T Consensus 557 ~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg-~gtdvAk 635 (867)
T TIGR01524 557 NDFLLGADIEELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVD-TAADIAK 635 (867)
T ss_pred CCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeC-CccHHHH
Confidence 2 7999999999999999999999 8999999999999999999999999 8999999
Q ss_pred hhcCEEEecCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----------hHHHHHHHHHHHHHHHHHH
Q 001837 621 ETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAGIIALALGG-----------HPLVWAAVLADVGTCLIVI 689 (1007)
Q Consensus 621 ~aADiVLl~~~l~~I~~lI~~gR~~~~~i~~ni~~al~~ni~~i~la~~g-----------~~~~~~ail~~~~s~l~vv 689 (1007)
++||+||++++|..|+.++++||++++|+++|+.|.+..|+..++..+++ ++.+|+++++| ++++.+.
T Consensus 636 ~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d-~~~~al~ 714 (867)
T TIGR01524 636 EASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYD-FSQLTLP 714 (867)
T ss_pred HhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-HHHHhhc
Confidence 99999999999999999999999999999999999998887643322221 13467887777 5665554
Q ss_pred H
Q 001837 690 L 690 (1007)
Q Consensus 690 l 690 (1007)
.
T Consensus 715 ~ 715 (867)
T TIGR01524 715 W 715 (867)
T ss_pred C
Confidence 4
No 12
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=2.5e-85 Score=787.96 Aligned_cols=487 Identities=28% Similarity=0.404 Sum_probs=415.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCCc-ceE-EecCC--EEeeCCCcccCcEEEEeCCCcccccEEEEeceeeee
Q 001837 166 IVFLFTIAEWLESRASHKATAVMSSLMSIAPQ-KAI-IAGTG--EEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGKCEVD 241 (1007)
Q Consensus 166 Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~-~~~-V~rdg--~~V~~~dLv~GDIV~L~~Ge~VPaDgiVl~G~~~VD 241 (1007)
+++..+++.|+|.++++|+++.+++|+++.|. +++ |.||| ++|++++|+|||+|+|++||+|||||+|++|.+.||
T Consensus 72 l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~~~VD 151 (673)
T PRK14010 72 LLLTLVFANFSEALAEGRGKAQANALRQTQTEMKARRIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGLATVD 151 (673)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEcceEEe
Confidence 34445679999999999999999999999886 675 67888 789999999999999999999999999999999999
Q ss_pred cccCCCCCeeeEecCC---CeeeeceEEeeeeEEEEEEEEecceEEehhHHHHHHhhccchHHHHHHHHHHHhHhHHHHH
Q 001837 242 EKTLTGESYPVSKQKG---STVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVDKFSQYYTPAVIF 318 (1007)
Q Consensus 242 ES~LTGES~Pv~K~~g---~~V~aGT~v~~G~~~~~V~~tG~~T~~gki~~lv~~a~~~ks~lq~~~~~i~~~~~~i~l~ 318 (1007)
||+|||||.|+.|++| +.||+||.|.+|.+.++|+++|.+|++|||.+++++++.+++|+|.....+...++ +++
T Consensus 152 ESaLTGES~PV~K~~g~d~~~V~aGT~v~~G~~~i~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~--ii~ 229 (673)
T PRK14010 152 ESAITGESAPVIKESGGDFDNVIGGTSVASDWLEVEITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLT--IIF 229 (673)
T ss_pred cchhcCCCCceeccCCCccCeeecCceeecceEEEEEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHh--HHH
Confidence 9999999999999999 88999999999999999999999999999999999999999999976655543322 222
Q ss_pred HHHHHHHHHHHhcCCchhHHHHHHhhhhhhhccccchhhHHHHHHHHHHHHHHcCCcccchhhhhhccCccEEEecCccc
Q 001837 319 ISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGT 398 (1007)
Q Consensus 319 ia~l~~l~~~~~~~~~~~~~~~~al~vLv~a~P~aL~l~i~la~~~a~~~lak~gilvk~~~~lE~Lg~vd~I~fDKTGT 398 (1007)
++++++++++. .+.++...+.+++++++.++||+|+..+|++...++.+|+++|+++|+++++|+||++|+||||||||
T Consensus 230 l~~~~~~~~~~-~~~~~~~~~~~~val~V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGT 308 (673)
T PRK14010 230 LVVILTMYPLA-KFLNFNLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGT 308 (673)
T ss_pred HHHHHHHHHHH-hhccHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCc
Confidence 22222221111 11233445667778888889999999999999999999999999999999999999999999999999
Q ss_pred cccCceEEEEeecCCCCCCHHHHHHHHHhhhhcCCChHHHHHHHHhhhCCCCCCCCCcccceecc----CCceEEEECCE
Q 001837 399 ITRGEFVMSEFQPLSEDINLNTLLYWVSSIESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFP----GEGIYGKIGGE 474 (1007)
Q Consensus 399 LT~g~~~v~~i~~~~~~~~~~~lL~~~asle~~s~hPi~~AIv~~a~~~~i~~~~~~~~~~~~~~----g~Gi~~~i~g~ 474 (1007)
||+|++.+.++.+.++ .+.++++.++...+..+.||+++||++++++.+++.. ....++..+. +.|+ .++++
T Consensus 309 LT~Gn~~~~~~~~~~~-~~~~~ll~~a~~~~~~s~~P~~~AIv~~a~~~~~~~~-~~~~~~~pF~~~~k~~gv--~~~g~ 384 (673)
T PRK14010 309 ITYGNRMADAFIPVKS-SSFERLVKAAYESSIADDTPEGRSIVKLAYKQHIDLP-QEVGEYIPFTAETRMSGV--KFTTR 384 (673)
T ss_pred CCCCCeEEEEEEeCCC-ccHHHHHHHHHHhcCCCCChHHHHHHHHHHHcCCCch-hhhcceeccccccceeEE--EECCE
Confidence 9999988888776533 4556788887788888999999999999987765421 1112222222 3344 36788
Q ss_pred EEEEecHHHHHHh----CCCCCC----CcCCcCCCCCeEEEEEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEc
Q 001837 475 EIYIGNRKIAQRA----GCGTVP----SVDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLT 546 (1007)
Q Consensus 475 ~i~ig~~~~~~~~----~~~~~~----~~~~~~~~g~~~i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlT 546 (1007)
.+..|+++++... +..... ..+++..+|.+++++..|++++|++.|+||+|||++++|++||++||+++|+|
T Consensus 385 ~i~kGa~~~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~v~~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiT 464 (673)
T PRK14010 385 EVYKGAPNSMVKRVKEAGGHIPVDLDALVKGVSKKGGTPLVVLEDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCT 464 (673)
T ss_pred EEEECCHHHHHHHhhhcCCCCchHHHHHHHHHHhCCCeEEEEEECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEEC
Confidence 8999999886321 111101 12345667889999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHhCCCcceEEeccCHhHHHHHHHHHhhCC-eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcCE
Q 001837 547 GDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEG-KTAMIGDGINDAPALATADIGISMGISGSALATETGQV 625 (1007)
Q Consensus 547 GD~~~tA~~vA~~lGI~~~~V~ar~sPeqK~~iV~~Lq~~G-~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aADi 625 (1007)
||++.||.++|+++||+ .+|||++||||.++|+.||++| .|+|+|||+||+|||++|||||||| +|+++|+++||+
T Consensus 465 GDn~~TA~aIA~elGI~--~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADi 541 (673)
T PRK14010 465 GDNELTAATIAKEAGVD--RFVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMN-SGTMSAKEAANL 541 (673)
T ss_pred CCCHHHHHHHHHHcCCc--eEEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeC-CCCHHHHHhCCE
Confidence 99999999999999999 8999999999999999999999 8999999999999999999999999 999999999999
Q ss_pred EEecCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001837 626 ILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAG 662 (1007)
Q Consensus 626 VLl~~~l~~I~~lI~~gR~~~~~i~~ni~~al~~ni~ 662 (1007)
||+++||..|++++++||++|.|+++.+.|+++.|+.
T Consensus 542 VLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~ 578 (673)
T PRK14010 542 IDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIA 578 (673)
T ss_pred EEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHH
Confidence 9999999999999999999999999999999999885
No 13
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=2.6e-85 Score=828.03 Aligned_cols=603 Identities=20% Similarity=0.275 Sum_probs=463.1
Q ss_pred cccccccccccccccCCCchHHHHHHHHHHHHHHHHhhhhHHHHHHHhhhhchHHHHHHHHHHHHcCcccHHHHHHHHHH
Q 001837 73 FEANVRAYGGTSYQKKWPSPYAMACGVLLAISILKYVYHPLRWFALGAVAIGIFPIILKGLAAIRNFKLDINILVLIAVI 152 (1007)
Q Consensus 73 y~as~~~~g~~~~~~~~~~~~~~~~gill~isl~~~~~~~l~~l~l~~~~~~~~p~~~~a~~~l~~~~l~i~~Li~ia~~ 152 (1007)
...+...+|+|....+.+.+++.. ++..|.+|+.|+++++.+++++-- .+. .+. .
T Consensus 66 v~~r~~~yG~N~l~~~~~~s~~~~--------~~~~f~~~~~~~l~~~ails~~~~------~~~---~~~--------~ 120 (941)
T TIGR01517 66 LERREKVYGKNELPEKPPKSFLQI--------VWAALSDQTLILLSVAAVVSLVLG------LPE---PGE--------G 120 (941)
T ss_pred HHHHHHHhCCCCCCCCCCCCHHHH--------HHHHHhCHHHHHHHHHHHHHHHHh------hcc---ccc--------c
Confidence 334566789998877666665432 455566777666554444332100 000 000 0
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCcceEEecCC--EEeeCCCcccCcEEEEeCCCcccc
Q 001837 153 GTIAMNDYIEAGIIVFLFTIAEWLESRASHKATAVMSSLMSI-APQKAIIAGTG--EEVDAGEVKLNTVLAVKAGEVIPI 229 (1007)
Q Consensus 153 ~~~~~~~y~~a~~Il~l~~i~~~le~~~~~k~~~~l~~L~~~-~p~~~~V~rdg--~~V~~~dLv~GDIV~L~~Ge~VPa 229 (1007)
-.-....|++++++++++++...+..++++++++.+++|.+. .+.+++|+||| ++|+++||+|||+|.|++||+|||
T Consensus 121 ~~~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPa 200 (941)
T TIGR01517 121 KADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPA 200 (941)
T ss_pred cCccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecc
Confidence 000012567777766666666666677777777777777653 46789999999 799999999999999999999999
Q ss_pred cEEEEec-eeeeecccCCCCCeeeEecCCCe--eeeceEEeeeeEEEEEEEEecceEEehhHHHHHHhhccchHHHHHHH
Q 001837 230 DGIVVDG-KCEVDEKTLTGESYPVSKQKGST--VWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVD 306 (1007)
Q Consensus 230 DgiVl~G-~~~VDES~LTGES~Pv~K~~g~~--V~aGT~v~~G~~~~~V~~tG~~T~~gki~~lv~~a~~~ks~lq~~~~ 306 (1007)
||+|++| ++.||||+|||||.|+.|.+++. ||+||.|.+|.+.++|++||.+|.+|||.+++.+++ +++|+++.++
T Consensus 201 D~~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~~~~~~-~~t~l~~~~~ 279 (941)
T TIGR01517 201 DGVFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRAEG-EDTPLQEKLS 279 (941)
T ss_pred cEEEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHhhccCC-CCCcHHHHHH
Confidence 9999999 79999999999999999988765 999999999999999999999999999999988765 5679999999
Q ss_pred HHHHhHhHHHHHHHHHHHHHHHH---hc---C---------CchhHHHHHHhhhhhhhccccchhhHHHHHHHHHHHHHH
Q 001837 307 KFSQYYTPAVIFISACVAVIPIA---LG---V---------SNHKQWFHLALVVLVSACPCALILSTPVVTYCALTKAAT 371 (1007)
Q Consensus 307 ~i~~~~~~i~l~ia~l~~l~~~~---~~---~---------~~~~~~~~~al~vLv~a~P~aL~l~i~la~~~a~~~lak 371 (1007)
++++++.++++++++++++++++ +. . .++...+.+++++++++|||+|++++|++++.++.+|++
T Consensus 280 ~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~mak 359 (941)
T TIGR01517 280 ELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMK 359 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHh
Confidence 99999999888877777665532 11 0 134456788999999999999999999999999999999
Q ss_pred cCCcccchhhhhhccCccEEEecCccccccCceEEEEeecCCCCCC-----------HHHHHHHHHhhh-----------
Q 001837 372 SGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDIN-----------LNTLLYWVSSIE----------- 429 (1007)
Q Consensus 372 ~gilvk~~~~lE~Lg~vd~I~fDKTGTLT~g~~~v~~i~~~~~~~~-----------~~~lL~~~asle----------- 429 (1007)
+|+++|+++++|+||++|+||||||||||+|+|+|.+++..++.++ ..+++..+..+.
T Consensus 360 ~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~ 439 (941)
T TIGR01517 360 DNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGG 439 (941)
T ss_pred CCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCCHHHHHHHHHHHHhCCCCccccCCCC
Confidence 9999999999999999999999999999999999999875432111 112232222211
Q ss_pred --hcCCChHHHHHHHHhhhCCCCCCC-----CC--ccccee-ccCCceEEEECCE---EEEEecHHHHHHh--------C
Q 001837 430 --SKSSHPMSAALVEYGRSLSIEPKP-----ED--VEDYQN-FPGEGIYGKIGGE---EIYIGNRKIAQRA--------G 488 (1007)
Q Consensus 430 --~~s~hPi~~AIv~~a~~~~i~~~~-----~~--~~~~~~-~~g~Gi~~~i~g~---~i~ig~~~~~~~~--------~ 488 (1007)
...++|++.||++++.+.+.+... .. ...|.. ..+.++....++. .+.-|.++.+... +
T Consensus 440 ~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g 519 (941)
T TIGR01517 440 KRAFIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNG 519 (941)
T ss_pred ccccCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCC
Confidence 124689999999999876543210 00 111111 1233444444332 2334666543211 1
Q ss_pred CCC-C--------CCcCCcCCCCCeEEEEE----------------ECCEEEEEEEecCcccccHHHHHHHHHHCCCeEE
Q 001837 489 CGT-V--------PSVDGPKMKGNTIGYIF----------------SGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTA 543 (1007)
Q Consensus 489 ~~~-~--------~~~~~~~~~g~~~i~v~----------------~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~ 543 (1007)
... . ...+++..+|.+++.++ .|++|+|+++|+||+|++++++|++|+++||+++
T Consensus 520 ~~~~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~ 599 (941)
T TIGR01517 520 EATPISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVR 599 (941)
T ss_pred CcccCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEE
Confidence 100 0 11234566788877765 3569999999999999999999999999999999
Q ss_pred EEcCCCHHHHHHHHHHhCCCcc-------------------------eEEeccCHhHHHHHHHHHhhCC-eEEEEcCCcc
Q 001837 544 MLTGDNQSAAMQAQEQLGNALN-------------------------VVHSELLPEDKAKIINQFKQEG-KTAMIGDGIN 597 (1007)
Q Consensus 544 mlTGD~~~tA~~vA~~lGI~~~-------------------------~V~ar~sPeqK~~iV~~Lq~~G-~VamVGDG~N 597 (1007)
|+|||++.||.++|+++||..+ .||||++|+||.++|+.||+.| +|+|||||+|
T Consensus 600 miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvN 679 (941)
T TIGR01517 600 MVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTN 679 (941)
T ss_pred EECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 9999999999999999999742 6999999999999999999999 8999999999
Q ss_pred CHHHHhhCCeeEEeCCCCcHHHHhhcCEEEecCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh------
Q 001837 598 DAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAGIIALALGGH------ 671 (1007)
Q Consensus 598 Da~ALk~ADVGIAmg~~gs~~A~~aADiVLl~~~l~~I~~lI~~gR~~~~~i~~ni~~al~~ni~~i~la~~g~------ 671 (1007)
|+|||++||||||||.+|+++|+++||+||++++|+.|+.++++||++++++++|+.|++++|+..++++++|.
T Consensus 680 DapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~ 759 (941)
T TIGR01517 680 DAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTS 759 (941)
T ss_pred hHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 99999999999999988999999999999999999999999999999999999999999999998776666542
Q ss_pred -----HHHHHHHHHHHHHHHHHHHh--hhhhcccccC
Q 001837 672 -----PLVWAAVLADVGTCLIVILN--SMLLLHETHT 701 (1007)
Q Consensus 672 -----~~~~~ail~~~~s~l~vvlN--Slrll~~~~~ 701 (1007)
+.+|++++++.++++.+... .-.+++++|+
T Consensus 760 pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~ 796 (941)
T TIGR01517 760 PLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPI 796 (941)
T ss_pred cHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCC
Confidence 35788888888777777643 3334444444
No 14
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=6.1e-85 Score=820.08 Aligned_cols=589 Identities=21% Similarity=0.293 Sum_probs=472.4
Q ss_pred cccccccccccccCCCchHHHHHHHHHHHHHHHHh-hhhHHHHHHHhhhhchHHHHHHHHHHHHcCcccHHHHHHHHHHH
Q 001837 75 ANVRAYGGTSYQKKWPSPYAMACGVLLAISILKYV-YHPLRWFALGAVAIGIFPIILKGLAAIRNFKLDINILVLIAVIG 153 (1007)
Q Consensus 75 as~~~~g~~~~~~~~~~~~~~~~gill~isl~~~~-~~~l~~l~l~~~~~~~~p~~~~a~~~l~~~~l~i~~Li~ia~~~ 153 (1007)
.+...+|+|....+.+.+++.. ++..| .+|+.++++++.++
T Consensus 32 ~r~~~~G~N~i~~~~~~s~~~~--------~l~~~~~~~~~~~L~~aa~l------------------------------ 73 (884)
T TIGR01522 32 HRRAFHGWNEFDVEEDESLWKK--------FLSQFVKNPLILLLIASAVI------------------------------ 73 (884)
T ss_pred HHHHhcCCCcCCCCCCCCHHHH--------HHHHHhhChHHHHHHHHHHH------------------------------
Confidence 4456789998876665555432 44555 56776655444333
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcceEEecCC--EEeeCCCcccCcEEEEeCCCcccccE
Q 001837 154 TIAMNDYIEAGIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAIIAGTG--EEVDAGEVKLNTVLAVKAGEVIPIDG 231 (1007)
Q Consensus 154 ~~~~~~y~~a~~Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~~~~V~rdg--~~V~~~dLv~GDIV~L~~Ge~VPaDg 231 (1007)
+++++.|.+++++++++++...+..++++++++.+++|.++.|.+++|+||| ++|+++||+|||+|.|++||+|||||
T Consensus 74 s~~~g~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg 153 (884)
T TIGR01522 74 SVFMGNIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADL 153 (884)
T ss_pred HHHHcchhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeE
Confidence 2344667777777666666677777788888999999999999999999999 79999999999999999999999999
Q ss_pred EEEece-eeeecccCCCCCeeeEecCC--------------CeeeeceEEeeeeEEEEEEEEecceEEehhHHHHHHhhc
Q 001837 232 IVVDGK-CEVDEKTLTGESYPVSKQKG--------------STVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQN 296 (1007)
Q Consensus 232 iVl~G~-~~VDES~LTGES~Pv~K~~g--------------~~V~aGT~v~~G~~~~~V~~tG~~T~~gki~~lv~~a~~ 296 (1007)
+|++|+ +.||||+|||||.|+.|.++ +.+|+||.|.+|.+.++|++||.+|.+|+|.+++++++.
T Consensus 154 ~ii~g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~ 233 (884)
T TIGR01522 154 RIVEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEK 233 (884)
T ss_pred EEEEcCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCC
Confidence 999995 99999999999999999876 489999999999999999999999999999999999888
Q ss_pred cchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHhcCCchhHHHHHHhhhhhhhccccchhhHHHHHHHHHHHHHHcCCcc
Q 001837 297 SKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCALTKAATSGLLI 376 (1007)
Q Consensus 297 ~ks~lq~~~~~i~~~~~~i~l~ia~l~~l~~~~~~~~~~~~~~~~al~vLv~a~P~aL~l~i~la~~~a~~~lak~gilv 376 (1007)
+++|+|+.++++++++++++++++++++++.|+.+ .++..++.+++++++++|||+||+++|++++.++++|+++|+++
T Consensus 234 ~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak~~ilv 312 (884)
T TIGR01522 234 PKTPLQKSMDLLGKQLSLVSFGVIGVICLVGWFQG-KDWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIV 312 (884)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHhhcCCcc
Confidence 99999999999999998877766666666655543 46777889999999999999999999999999999999999999
Q ss_pred cchhhhhhccCccEEEecCccccccCceEEEEeecCCCCC---------------------------CHHHHHHHHHhhh
Q 001837 377 KGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDI---------------------------NLNTLLYWVSSIE 429 (1007)
Q Consensus 377 k~~~~lE~Lg~vd~I~fDKTGTLT~g~~~v~~i~~~~~~~---------------------------~~~~lL~~~asle 429 (1007)
|++.++|+||++|+||||||||||+|+|+|.+++..++.. ...+++..++...
T Consensus 313 k~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~ 392 (884)
T TIGR01522 313 RKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCN 392 (884)
T ss_pred cchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHHHHHHHHHHhhhC
Confidence 9999999999999999999999999999999987543211 0123343332221
Q ss_pred h---------cCCChHHHHHHHHhhhCCCCCCCCCcccceeccCCc------eEEEE--CCEE--EEEecHHHHHHh---
Q 001837 430 S---------KSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFPGEG------IYGKI--GGEE--IYIGNRKIAQRA--- 487 (1007)
Q Consensus 430 ~---------~s~hPi~~AIv~~a~~~~i~~~~~~~~~~~~~~g~G------i~~~i--~g~~--i~ig~~~~~~~~--- 487 (1007)
. ..++|++.||++++...+++...........+|+.. +.... ++.. +..|.++.....
T Consensus 393 ~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~ 472 (884)
T TIGR01522 393 NAKFRNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTY 472 (884)
T ss_pred CCeecCCCCCcCCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhh
Confidence 1 125699999999998776542111233344555432 21122 3332 234666543221
Q ss_pred -----CCCC-C---------CCcCCcCCCCCeEEEEEEC-----CEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcC
Q 001837 488 -----GCGT-V---------PSVDGPKMKGNTIGYIFSG-----ASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTG 547 (1007)
Q Consensus 488 -----~~~~-~---------~~~~~~~~~g~~~i~v~~d-----~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTG 547 (1007)
+... + ...+++..+|.+++.++.+ ++|+|+++|+||+||+++++|++|+++|++++|+||
T Consensus 473 ~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTG 552 (884)
T TIGR01522 473 YQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPEKGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITG 552 (884)
T ss_pred hhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcCCCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECC
Confidence 1100 0 0123456789999988864 489999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhCCCcc-------------------------eEEeccCHhHHHHHHHHHhhCC-eEEEEcCCccCHHH
Q 001837 548 DNQSAAMQAQEQLGNALN-------------------------VVHSELLPEDKAKIINQFKQEG-KTAMIGDGINDAPA 601 (1007)
Q Consensus 548 D~~~tA~~vA~~lGI~~~-------------------------~V~ar~sPeqK~~iV~~Lq~~G-~VamVGDG~NDa~A 601 (1007)
|++.||.++|+++||... .||||++|+||.++|+.||+.| .|+|||||+||+||
T Consensus 553 D~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pA 632 (884)
T TIGR01522 553 DSQETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPA 632 (884)
T ss_pred CCHHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHH
Confidence 999999999999999732 5999999999999999999999 99999999999999
Q ss_pred HhhCCeeEEeCCCCcHHHHhhcCEEEecCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----hh------
Q 001837 602 LATADIGISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAGIIALALG----GH------ 671 (1007)
Q Consensus 602 Lk~ADVGIAmg~~gs~~A~~aADiVLl~~~l~~I~~lI~~gR~~~~~i~~ni~~al~~ni~~i~la~~----g~------ 671 (1007)
|++|||||+||.+|+++++++||++|++++|..|+.++++||++++++++|+.|.++.|+..+++.++ +.
T Consensus 633 l~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~ 712 (884)
T TIGR01522 633 LKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLMGFPNPLNA 712 (884)
T ss_pred HHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhH
Confidence 99999999999779999999999999999999999999999999999999999999999876644432 22
Q ss_pred -HHHHHHHHHHHHHHHHHHHh--hhhhcccccCC
Q 001837 672 -PLVWAAVLADVGTCLIVILN--SMLLLHETHTH 702 (1007)
Q Consensus 672 -~~~~~ail~~~~s~l~vvlN--Slrll~~~~~~ 702 (1007)
+.+|++++++.++++.+... +-.+++++|+.
T Consensus 713 ~qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P~~ 746 (884)
T TIGR01522 713 MQILWINILMDGPPAQSLGVEPVDKDVMRKPPRP 746 (884)
T ss_pred HHHHHHHHHHHhhHHHHhccCCCChhHhhCCCCC
Confidence 45788888888877666552 33344444443
No 15
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=1.2e-83 Score=774.15 Aligned_cols=490 Identities=27% Similarity=0.365 Sum_probs=420.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCc-ceEEecCC---EEeeCCCcccCcEEEEeCCCcccccEEEEece
Q 001837 162 EAGIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQ-KAIIAGTG---EEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGK 237 (1007)
Q Consensus 162 ~a~~Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~-~~~V~rdg---~~V~~~dLv~GDIV~L~~Ge~VPaDgiVl~G~ 237 (1007)
.++++++.++++.|+|.++++|+++.+++|+++.|. +++|+|+| ++|++++|++||+|+|++||+|||||+|++|.
T Consensus 68 i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~vir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~ 147 (679)
T PRK01122 68 ITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARKLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGV 147 (679)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEcc
Confidence 334455666889999999999999999999999886 68888875 68999999999999999999999999999999
Q ss_pred eeeecccCCCCCeeeEecCCCe---eeeceEEeeeeEEEEEEEEecceEEehhHHHHHHhhccchHHHHHHHHHHHhHhH
Q 001837 238 CEVDEKTLTGESYPVSKQKGST---VWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVDKFSQYYTP 314 (1007)
Q Consensus 238 ~~VDES~LTGES~Pv~K~~g~~---V~aGT~v~~G~~~~~V~~tG~~T~~gki~~lv~~a~~~ks~lq~~~~~i~~~~~~ 314 (1007)
+.||||+|||||.|+.|++|+. ||+||.|.+|.+.++|+++|.+|+++||.+++++++.+++|+|..++.+..+++.
T Consensus 148 a~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~ 227 (679)
T PRK01122 148 ASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVIRITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTI 227 (679)
T ss_pred EEEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEEEEEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhH
Confidence 9999999999999999999988 9999999999999999999999999999999999999999999988888877766
Q ss_pred HHHHHHHHHHHHHHHhcCCchhHHHHHHhhhhhhhccccchhhHHHHHHHHHHHHHHcCCcccchhhhhhccCccEEEec
Q 001837 315 AVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFD 394 (1007)
Q Consensus 315 i~l~ia~l~~l~~~~~~~~~~~~~~~~al~vLv~a~P~aL~l~i~la~~~a~~~lak~gilvk~~~~lE~Lg~vd~I~fD 394 (1007)
+++++.++++.+.|+.+ . ...+.+++++++++|||+|+..+|+....++.+|+++|+++|+++++|+||++|+||||
T Consensus 228 i~l~~~~~~~~~~~~~g-~--~~~l~~~iallV~aiP~alg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~D 304 (679)
T PRK01122 228 IFLLVVATLPPFAAYSG-G--ALSITVLVALLVCLIPTTIGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLD 304 (679)
T ss_pred HHHHHHHHHHHHHHHhC-c--hHHHHHHHHHHHHcccchhhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEe
Confidence 55554444433333332 1 23678889999999999999999999999999999999999999999999999999999
Q ss_pred CccccccCceEEEEeecCCCCCCHHHHHHHHHhhhhcCCChHHHHHHHHhhh-CCCCCCCC--CcccceeccC-CceEEE
Q 001837 395 KTGTITRGEFVMSEFQPLSEDINLNTLLYWVSSIESKSSHPMSAALVEYGRS-LSIEPKPE--DVEDYQNFPG-EGIYGK 470 (1007)
Q Consensus 395 KTGTLT~g~~~v~~i~~~~~~~~~~~lL~~~asle~~s~hPi~~AIv~~a~~-~~i~~~~~--~~~~~~~~~g-~Gi~~~ 470 (1007)
||||||+|+|.+.++++.+. .+.++++..++..+..+.||.++||++++++ .+...... ...++..+.. .++.+.
T Consensus 305 KTGTLT~g~~~v~~~~~~~~-~~~~~ll~~a~~~s~~s~hP~~~AIv~~a~~~~~~~~~~~~~~~~~~~pF~s~~~~~gv 383 (679)
T PRK01122 305 KTGTITLGNRQASEFLPVPG-VTEEELADAAQLSSLADETPEGRSIVVLAKQRFNLRERDLQSLHATFVPFSAQTRMSGV 383 (679)
T ss_pred CCCCCcCCcEEEEEEEeCCC-CCHHHHHHHHHHhcCCCCCchHHHHHHHHHhhcCCCchhhccccceeEeecCcCceEEE
Confidence 99999999999999987543 5667788888888888999999999999876 34322110 0112222222 244443
Q ss_pred -ECCEEEEEecHHHHH----HhCCCCC----CCcCCcCCCCCeEEEEEECCEEEEEEEecCcccccHHHHHHHHHHCCCe
Q 001837 471 -IGGEEIYIGNRKIAQ----RAGCGTV----PSVDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIR 541 (1007)
Q Consensus 471 -i~g~~i~ig~~~~~~----~~~~~~~----~~~~~~~~~g~~~i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIk 541 (1007)
++|+.+..|+++.+. +.+.... ...+++..+|.++++++.|++++|++.|+|++|||++++|++||++||+
T Consensus 384 ~~~g~~~~kGa~e~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~va~~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~ 463 (679)
T PRK01122 384 DLDGREIRKGAVDAIRRYVESNGGHFPAELDAAVDEVARKGGTPLVVAEDNRVLGVIYLKDIVKPGIKERFAELRKMGIK 463 (679)
T ss_pred EECCEEEEECCHHHHHHHHHhcCCcChHHHHHHHHHHHhCCCcEEEEEECCeEEEEEEEeccCchhHHHHHHHHHHCCCe
Confidence 678899999987542 2222210 1123456789999999999999999999999999999999999999999
Q ss_pred EEEEcCCCHHHHHHHHHHhCCCcceEEeccCHhHHHHHHHHHhhCC-eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHH
Q 001837 542 TAMLTGDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEG-KTAMIGDGINDAPALATADIGISMGISGSALAT 620 (1007)
Q Consensus 542 v~mlTGD~~~tA~~vA~~lGI~~~~V~ar~sPeqK~~iV~~Lq~~G-~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~ 620 (1007)
++|+|||++.||.++|+++||+ .+|||++||||.++|+.||+.| .|+|+|||+||+|||++|||||||| +|+++|+
T Consensus 464 vvMiTGDn~~TA~aIA~elGId--~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAk 540 (679)
T PRK01122 464 TVMITGDNPLTAAAIAAEAGVD--DFLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAK 540 (679)
T ss_pred EEEECCCCHHHHHHHHHHcCCc--EEEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHH
Confidence 9999999999999999999999 9999999999999999999999 8999999999999999999999999 9999999
Q ss_pred hhcCEEEecCCcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 001837 621 ETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIA 658 (1007)
Q Consensus 621 ~aADiVLl~~~l~~I~~lI~~gR~~~~~i~~ni~~al~ 658 (1007)
++||+||+++||..|++++++||++.-+-..-..|+++
T Consensus 541 eAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~ 578 (679)
T PRK01122 541 EAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIA 578 (679)
T ss_pred HhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHH
Confidence 99999999999999999999999998555444566665
No 16
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.7e-85 Score=760.22 Aligned_cols=555 Identities=23% Similarity=0.349 Sum_probs=445.9
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcceEEecCC--EEeeCCCcccCcEEEEeCCCcc
Q 001837 150 AVIGTIAMNDYIEAGIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAIIAGTG--EEVDAGEVKLNTVLAVKAGEVI 227 (1007)
Q Consensus 150 a~~~~~~~~~y~~a~~Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~~~~V~rdg--~~V~~~dLv~GDIV~L~~Ge~V 227 (1007)
+++++|.+.+|.++++|.+++.++.....++++++++.+++|+++.|..+.|+|+| +.+++.+|||||||.|+-||+|
T Consensus 68 sA~ISfvl~~~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkV 147 (972)
T KOG0202|consen 68 SAAISFVLADFDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKI 147 (972)
T ss_pred HHHHHHHHHhcccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCCcc
Confidence 33445667778888888888888888888889999999999999999999999999 8999999999999999999999
Q ss_pred cccEEEEece-eeeecccCCCCCeeeEecC--------------CCeeeeceEEeeeeEEEEEEEEecceEEehhHHHHH
Q 001837 228 PIDGIVVDGK-CEVDEKTLTGESYPVSKQK--------------GSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVE 292 (1007)
Q Consensus 228 PaDgiVl~G~-~~VDES~LTGES~Pv~K~~--------------g~~V~aGT~v~~G~~~~~V~~tG~~T~~gki~~lv~ 292 (1007)
|||.+|++-. +.||||+|||||.|+.|.. .+++|+||.|..|.++++|+.||.+|.+|++.+.+.
T Consensus 148 PADlRl~e~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~ 227 (972)
T KOG0202|consen 148 PADLRLIEAKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQ 227 (972)
T ss_pred ccceeEEeeeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHh
Confidence 9999999874 9999999999999999932 478999999999999999999999999999999999
Q ss_pred HhhccchHHHHHHHHHHHhHhHHHHHHHHHHHHH--HHHh-----c--CCchhHHHHHHhhhhhhhccccchhhHHHHHH
Q 001837 293 EAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVI--PIAL-----G--VSNHKQWFHLALVVLVSACPCALILSTPVVTY 363 (1007)
Q Consensus 293 ~a~~~ks~lq~~~~~i~~~~~~i~l~ia~l~~l~--~~~~-----~--~~~~~~~~~~al~vLv~a~P~aL~l~i~la~~ 363 (1007)
+.+.+++|+|+.++.+...++-++.++.+.+.++ .|+. + +.....+|..++++.++++|++||+.+++.++
T Consensus 228 ~~e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLA 307 (972)
T KOG0202|consen 228 ATESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLA 307 (972)
T ss_pred ccCCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHHHHHhccCCCcchhhhhHH
Confidence 9999999999999999999885544444443333 3333 1 23456678899999999999999999999999
Q ss_pred HHHHHHHHcCCcccchhhhhhccCccEEEecCccccccCceEEEEeecCCCC-------------C--------------
Q 001837 364 CALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSED-------------I-------------- 416 (1007)
Q Consensus 364 ~a~~~lak~gilvk~~~~lE~Lg~vd~I~fDKTGTLT~g~~~v~~i~~~~~~-------------~-------------- 416 (1007)
.+.+||++++++||.+.++|+||.+++||.|||||||+|+|.+..++..+.. +
T Consensus 308 LG~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~ 387 (972)
T KOG0202|consen 308 LGTRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEK 387 (972)
T ss_pred HhHHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCcccc
Confidence 9999999999999999999999999999999999999999999998754321 0
Q ss_pred ----CHH---HHHHHH-----Hhhhh-------cCCChHHHHHHHHhhhCCCCCCCCCcc-----------------cce
Q 001837 417 ----NLN---TLLYWV-----SSIES-------KSSHPMSAALVEYGRSLSIEPKPEDVE-----------------DYQ 460 (1007)
Q Consensus 417 ----~~~---~lL~~~-----asle~-------~s~hPi~~AIv~~a~~~~i~~~~~~~~-----------------~~~ 460 (1007)
..+ +++... +.+++ ..+.|.+.||..++++.++........ ...
T Consensus 388 ~~~~~~~~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~ 467 (972)
T KOG0202|consen 388 DKAGDNDLLQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIA 467 (972)
T ss_pred ccccccHHHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhhee
Confidence 011 122211 12221 147899999999999888764221111 001
Q ss_pred eccCC------ceEEE--EC--CEEEE-EecHHH-HHHhCC-------CC-----------CCCcCCcCCCCCeEEEE--
Q 001837 461 NFPGE------GIYGK--IG--GEEIY-IGNRKI-AQRAGC-------GT-----------VPSVDGPKMKGNTIGYI-- 508 (1007)
Q Consensus 461 ~~~g~------Gi~~~--i~--g~~i~-ig~~~~-~~~~~~-------~~-----------~~~~~~~~~~g~~~i~v-- 508 (1007)
+++.. ++... .+ +..+. -|..+- +++... .. .....++..+|.+++.+
T Consensus 468 elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~ 547 (972)
T KOG0202|consen 468 ELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALAS 547 (972)
T ss_pred EeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEc
Confidence 22211 11111 01 11222 232221 111100 00 00112233444444444
Q ss_pred ----------------------EECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc-
Q 001837 509 ----------------------FSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN- 565 (1007)
Q Consensus 509 ----------------------~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~- 565 (1007)
+.|++|+|++++.||||++++++|+.|+++||+|+|+|||++.||.+||+++|+..+
T Consensus 548 ~~~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ 627 (972)
T KOG0202|consen 548 KDSPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSED 627 (972)
T ss_pred cCCcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCC
Confidence 458899999999999999999999999999999999999999999999999998643
Q ss_pred ----------------------------eEEeccCHhHHHHHHHHHhhCC-eEEEEcCCccCHHHHhhCCeeEEeCCCCc
Q 001837 566 ----------------------------VVHSELLPEDKAKIINQFKQEG-KTAMIGDGINDAPALATADIGISMGISGS 616 (1007)
Q Consensus 566 ----------------------------~V~ar~sPeqK~~iV~~Lq~~G-~VamVGDG~NDa~ALk~ADVGIAmg~~gs 616 (1007)
.+|+|++|++|.+||+.||++| .|||+|||+||+||||.||||||||.+|+
T Consensus 628 ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GT 707 (972)
T KOG0202|consen 628 EDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGT 707 (972)
T ss_pred ccccccccchhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCcc
Confidence 7999999999999999999999 99999999999999999999999999999
Q ss_pred HHHHhhcCEEEecCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----Hhhh-------HHHHHHHHHHHHHH
Q 001837 617 ALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAGIIALA----LGGH-------PLVWAAVLADVGTC 685 (1007)
Q Consensus 617 ~~A~~aADiVLl~~~l~~I~~lI~~gR~~~~~i~~ni~~al~~ni~~i~la----~~g~-------~~~~~ail~~~~s~ 685 (1007)
++||++||+||.||||++|..+|++||++|.|+++++.|.+..|+..+.+. ++|+ +.+|+++++|-+++
T Consensus 708 dVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLWiNlvtDG~PA 787 (972)
T KOG0202|consen 708 DVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQILWINLVTDGPPA 787 (972)
T ss_pred HhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhheeeeeccCCch
Confidence 999999999999999999999999999999999999999999999744333 3443 47999999999988
Q ss_pred HHHHHh--hhhhcccccCCCC
Q 001837 686 LIVILN--SMLLLHETHTHRG 704 (1007)
Q Consensus 686 l~vvlN--Slrll~~~~~~~~ 704 (1007)
-.+-+| ..=+.+++|++..
T Consensus 788 ~aLG~ep~D~DiM~kpPR~~~ 808 (972)
T KOG0202|consen 788 TALGFEPVDPDIMKKPPRDSK 808 (972)
T ss_pred hhcCCCCCChhHHhCCCCCCC
Confidence 888887 5556666666654
No 17
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=7.5e-82 Score=797.55 Aligned_cols=590 Identities=21% Similarity=0.289 Sum_probs=463.6
Q ss_pred ccccccccccccccccCCCchHHHHHHHHHHHHHHHHhhhhHHHHHHHhhhhchHHHHHHHHHHHHcCcccHHHHHHHHH
Q 001837 72 RFEANVRAYGGTSYQKKWPSPYAMACGVLLAISILKYVYHPLRWFALGAVAIGIFPIILKGLAAIRNFKLDINILVLIAV 151 (1007)
Q Consensus 72 Gy~as~~~~g~~~~~~~~~~~~~~~~gill~isl~~~~~~~l~~l~l~~~~~~~~p~~~~a~~~l~~~~l~i~~Li~ia~ 151 (1007)
+...+...+|+|....+.+.+++.. ++..|.+|+.++++++.++
T Consensus 31 ea~~rl~~~G~N~l~~~~~~s~~~~--------~l~q~~~~~~~iL~~aail---------------------------- 74 (1053)
T TIGR01523 31 EAQHRLKEVGENRLEADSGIDAKAM--------LLHQVCNAMCMVLIIAAAI---------------------------- 74 (1053)
T ss_pred HHHHHHHHcCCCCCCCCCCCCHHHH--------HHHHHhCHHHHHHHHHHHH----------------------------
Confidence 3345567789998876665555442 4566667776655444333
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcceEEecCC--EEeeCCCcccCcEEEEeCCCcccc
Q 001837 152 IGTIAMNDYIEAGIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAIIAGTG--EEVDAGEVKLNTVLAVKAGEVIPI 229 (1007)
Q Consensus 152 ~~~~~~~~y~~a~~Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~~~~V~rdg--~~V~~~dLv~GDIV~L~~Ge~VPa 229 (1007)
++++++|.++++|+++++++..+..++++++++.+++|+++.+.+++|+||| ++|+++||||||||.|++||+|||
T Consensus 75 --s~~~~~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPA 152 (1053)
T TIGR01523 75 --SFAMHDWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPA 152 (1053)
T ss_pred --HHHHhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeec
Confidence 3344778899999999999999999999999999999999999999999999 799999999999999999999999
Q ss_pred cEEEEece-eeeecccCCCCCeeeEecC---------------CCeeeeceEEeeeeEEEEEEEEecceEEehhHHHHHH
Q 001837 230 DGIVVDGK-CEVDEKTLTGESYPVSKQK---------------GSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEE 293 (1007)
Q Consensus 230 DgiVl~G~-~~VDES~LTGES~Pv~K~~---------------g~~V~aGT~v~~G~~~~~V~~tG~~T~~gki~~lv~~ 293 (1007)
|++|+++. +.||||+|||||.||.|.+ .|++|+||.|.+|.+.++|++||.+|.+|+|.+++.+
T Consensus 153 D~rLi~~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~ 232 (1053)
T TIGR01523 153 DLRLIETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQG 232 (1053)
T ss_pred cEEEEEeCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhh
Confidence 99999984 9999999999999999964 2678999999999999999999999999999998865
Q ss_pred hhc-----------------------------------cchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHhcCCchhHH
Q 001837 294 AQN-----------------------------------SKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQW 338 (1007)
Q Consensus 294 a~~-----------------------------------~ks~lq~~~~~i~~~~~~i~l~ia~l~~l~~~~~~~~~~~~~ 338 (1007)
... .+||+|+.++++++++..+.++++++++++.++ ......
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~---~~~~~~ 309 (1053)
T TIGR01523 233 DGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKF---DVDKEV 309 (1053)
T ss_pred hhhccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhhHHH
Confidence 431 248999999999999888777777766654332 112345
Q ss_pred HHHHhhhhhhhccccchhhHHHHHHHHHHHHHHcCCcccchhhhhhccCccEEEecCccccccCceEEEEeecCC-----
Q 001837 339 FHLALVVLVSACPCALILSTPVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLS----- 413 (1007)
Q Consensus 339 ~~~al~vLv~a~P~aL~l~i~la~~~a~~~lak~gilvk~~~~lE~Lg~vd~I~fDKTGTLT~g~~~v~~i~~~~----- 413 (1007)
+.++++++++++|++||+.++++++.++++|+++++++|++.++|+||.+++||+|||||||+|+|+|.+++..+
T Consensus 310 ~~~av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~ 389 (1053)
T TIGR01523 310 AIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTIS 389 (1053)
T ss_pred HHHHHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEE
Confidence 677899999999999999999999999999999999999999999999999999999999999999999886421
Q ss_pred -----CCC---------------------------------------C---------HHHHHHHHHhh-----h------
Q 001837 414 -----EDI---------------------------------------N---------LNTLLYWVSSI-----E------ 429 (1007)
Q Consensus 414 -----~~~---------------------------------------~---------~~~lL~~~asl-----e------ 429 (1007)
..+ + ..+++..++.. .
T Consensus 390 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~ 469 (1053)
T TIGR01523 390 IDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATD 469 (1053)
T ss_pred ecCCCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCCC
Confidence 000 0 01233222211 1
Q ss_pred --hcCCChHHHHHHHHhhhCCCCCC-------C--------------------CCcccceeccCC----ceEEEE--C-C
Q 001837 430 --SKSSHPMSAALVEYGRSLSIEPK-------P--------------------EDVEDYQNFPGE----GIYGKI--G-G 473 (1007)
Q Consensus 430 --~~s~hPi~~AIv~~a~~~~i~~~-------~--------------------~~~~~~~~~~g~----Gi~~~i--~-g 473 (1007)
...++|++.|++.++...+++.. . ........+|.. -+...+ + +
T Consensus 470 ~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~ 549 (1053)
T TIGR01523 470 CWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHG 549 (1053)
T ss_pred ceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEEEEeCCC
Confidence 12369999999999987776310 0 001112223322 122222 1 2
Q ss_pred E---EEEEecHHHHHHhCC--------CC--C---------CCcCCcCCCCCeEEEEE----------------------
Q 001837 474 E---EIYIGNRKIAQRAGC--------GT--V---------PSVDGPKMKGNTIGYIF---------------------- 509 (1007)
Q Consensus 474 ~---~i~ig~~~~~~~~~~--------~~--~---------~~~~~~~~~g~~~i~v~---------------------- 509 (1007)
. .+..|.++.+....- .. + ...+++..+|.+++.++
T Consensus 550 ~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~~~~~~~~~ 629 (1053)
T TIGR01523 550 ETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRA 629 (1053)
T ss_pred CEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchhhhccccchh
Confidence 2 234577765422110 00 0 11234556677765543
Q ss_pred ---ECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc---------------------
Q 001837 510 ---SGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN--------------------- 565 (1007)
Q Consensus 510 ---~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~--------------------- 565 (1007)
.|++|+|+++|+||+|++++++|++|+++||+++|+|||++.||.++|+++||..+
T Consensus 630 ~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~ 709 (1053)
T TIGR01523 630 TAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFD 709 (1053)
T ss_pred hhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhh
Confidence 46789999999999999999999999999999999999999999999999999632
Q ss_pred --------------eEEeccCHhHHHHHHHHHhhCC-eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcCEEEecC
Q 001837 566 --------------VVHSELLPEDKAKIINQFKQEG-KTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSN 630 (1007)
Q Consensus 566 --------------~V~ar~sPeqK~~iV~~Lq~~G-~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aADiVLl~~ 630 (1007)
.||||++|+||.++|+.||+.| .|+|+|||+||+|||++||||||||.+|+++|+++||++|+++
T Consensus 710 ~l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd 789 (1053)
T TIGR01523 710 ALSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDD 789 (1053)
T ss_pred hcCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecC
Confidence 4999999999999999999999 8999999999999999999999999889999999999999999
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----h----h--------hHHHHHHHHHHHHHHHHHHHh--h
Q 001837 631 DIRKVPEAIRLARKAHWKVIENIAVSIATKAGIIALAL----G----G--------HPLVWAAVLADVGTCLIVILN--S 692 (1007)
Q Consensus 631 ~l~~I~~lI~~gR~~~~~i~~ni~~al~~ni~~i~la~----~----g--------~~~~~~ail~~~~s~l~vvlN--S 692 (1007)
+|..|+.++++||++|+++++.+.|.++.|+..+++.+ + | ++.+|++++++.++++.+.+. .
T Consensus 790 ~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e~~~ 869 (1053)
T TIGR01523 790 NFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAA 869 (1053)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccCCCC
Confidence 99999999999999999999999999999986433322 2 1 234788888888887776653 3
Q ss_pred hhhcccccCC
Q 001837 693 MLLLHETHTH 702 (1007)
Q Consensus 693 lrll~~~~~~ 702 (1007)
--+++++|+.
T Consensus 870 ~~~m~~~Pr~ 879 (1053)
T TIGR01523 870 PDLMDRLPHD 879 (1053)
T ss_pred hhHHhcCCCC
Confidence 3344444443
No 18
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.3e-83 Score=802.66 Aligned_cols=530 Identities=25% Similarity=0.374 Sum_probs=437.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcceEEecCC--EEeeCCCcccCcEEEEeCCCcccccEEEEece-e
Q 001837 162 EAGIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAIIAGTG--EEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGK-C 238 (1007)
Q Consensus 162 ~a~~Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~~~~V~rdg--~~V~~~dLv~GDIV~L~~Ge~VPaDgiVl~G~-~ 238 (1007)
++.+|++++.++..+...+++|+.+.+++|++..+..+.|+||| ++|+++||||||||+|++||+||||++|++++ +
T Consensus 105 ~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~l 184 (917)
T COG0474 105 DAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDL 184 (917)
T ss_pred ceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecCc
Confidence 34456666677777778888889999999999999999999999 89999999999999999999999999999998 5
Q ss_pred eeecccCCCCCeeeEec--------------CCCeeeeceEEeeeeEEEEEEEEecceEEehhHHHHHHhhccchHHHHH
Q 001837 239 EVDEKTLTGESYPVSKQ--------------KGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRF 304 (1007)
Q Consensus 239 ~VDES~LTGES~Pv~K~--------------~g~~V~aGT~v~~G~~~~~V~~tG~~T~~gki~~lv~~a~~~ks~lq~~ 304 (1007)
.||||+|||||.|+.|. ..|++|+||.|.+|.+.++|++||.+|.+|++.+++.......+|+++.
T Consensus 185 ~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~~~~t~l~~~ 264 (917)
T COG0474 185 EVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTPLQRK 264 (917)
T ss_pred eEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhccccccCCcHHHH
Confidence 99999999999999995 3588999999999999999999999999999999999877889999999
Q ss_pred HHHHHHhHhHHHHHHHHHHHHHHHHhcCCchhHHHHHHhhhhhhhccccchhhHHHHHHHHHHHHHHcCCcccchhhhhh
Q 001837 305 VDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCALTKAATSGLLIKGGDYLQT 384 (1007)
Q Consensus 305 ~~~i~~~~~~i~l~ia~l~~l~~~~~~~~~~~~~~~~al~vLv~a~P~aL~l~i~la~~~a~~~lak~gilvk~~~~lE~ 384 (1007)
++++..++..+.++++++++++.++.+..++...+.++++++++++|++||+.++++++.++.+|+++++++|+++++|+
T Consensus 265 l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~mak~~~ivr~l~avE~ 344 (917)
T COG0474 265 LNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMAKDNAIVRSLNAIET 344 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccchhhccchhhh
Confidence 99999999999999999998888666544477889999999999999999999999999999999999999999999999
Q ss_pred ccCccEEEecCccccccCceEEEEeecCC--CCCC---------HHHHHHHHHhh---hh------cCCChHHHHHHHHh
Q 001837 385 LAKVRFMAFDKTGTITRGEFVMSEFQPLS--EDIN---------LNTLLYWVSSI---ES------KSSHPMSAALVEYG 444 (1007)
Q Consensus 385 Lg~vd~I~fDKTGTLT~g~~~v~~i~~~~--~~~~---------~~~lL~~~asl---e~------~s~hPi~~AIv~~a 444 (1007)
||++|+||+|||||||+|+|+|.+++..+ .+.+ ...++..++.. .. ..++|++.||++++
T Consensus 345 LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lc~~~~~~~~~~~~~gdptE~Al~~~a 424 (917)
T COG0474 345 LGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQAGDPTEGALVEFA 424 (917)
T ss_pred ccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHHHHHHHHHhcCcccccccCceecCCccHHHHHHHH
Confidence 99999999999999999999999999873 2222 01123322211 11 26799999999999
Q ss_pred hhCCC--CCCCCCc--ccceeccCCc----eEEEEC---C--EEEEEecHHHHHH-hCC----CCC---------CCcCC
Q 001837 445 RSLSI--EPKPEDV--EDYQNFPGEG----IYGKIG---G--EEIYIGNRKIAQR-AGC----GTV---------PSVDG 497 (1007)
Q Consensus 445 ~~~~i--~~~~~~~--~~~~~~~g~G----i~~~i~---g--~~i~ig~~~~~~~-~~~----~~~---------~~~~~ 497 (1007)
.+.+. +...... ....++|... +...++ + ..+.-|.++.+.. ... ... ...++
T Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~~~~~~~~~~~~~~ 504 (917)
T COG0474 425 EKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAVKE 504 (917)
T ss_pred HhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccCHHHHHHHHHHHHH
Confidence 98876 3211111 1244445432 222221 2 2344577766422 110 000 00111
Q ss_pred cCCCCCeE-----------------EEEEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh
Q 001837 498 PKMKGNTI-----------------GYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQL 560 (1007)
Q Consensus 498 ~~~~g~~~-----------------i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~l 560 (1007)
++.+|+++ ..++.|+.|+|+++|+||||++++++|+.|+++||++||+|||++.||++||+++
T Consensus 505 la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~ 584 (917)
T COG0474 505 LASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKEC 584 (917)
T ss_pred HHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHc
Confidence 22222211 3467889999999999999999999999999999999999999999999999999
Q ss_pred CCCcc---------------------------eEEeccCHhHHHHHHHHHhhCC-eEEEEcCCccCHHHHhhCCeeEEeC
Q 001837 561 GNALN---------------------------VVHSELLPEDKAKIINQFKQEG-KTAMIGDGINDAPALATADIGISMG 612 (1007)
Q Consensus 561 GI~~~---------------------------~V~ar~sPeqK~~iV~~Lq~~G-~VamVGDG~NDa~ALk~ADVGIAmg 612 (1007)
|+..+ .||||++|+||.+||+.||+.| .|+|+|||+||+||||+||||||||
T Consensus 585 Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg 664 (917)
T COG0474 585 GIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMG 664 (917)
T ss_pred CCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEec
Confidence 97532 5899999999999999999999 9999999999999999999999999
Q ss_pred CCCcHHHHhhcCEEEecCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh------------hHHHHHHHHH
Q 001837 613 ISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAGIIALALGG------------HPLVWAAVLA 680 (1007)
Q Consensus 613 ~~gs~~A~~aADiVLl~~~l~~I~~lI~~gR~~~~~i~~ni~~al~~ni~~i~la~~g------------~~~~~~ail~ 680 (1007)
.+|+++|+++||+++++++|..+..++++||++|.|+++.+.|.+..|+..+++.+++ ++.+|++++.
T Consensus 665 ~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~p~~~~qll~inll~ 744 (917)
T COG0474 665 GEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFLPLTPLQLLWINLLT 744 (917)
T ss_pred ccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHH
Confidence 8899999999999999999999999999999999999999999999999843333221 2467888888
Q ss_pred HHHHHHHHHHh
Q 001837 681 DVGTCLIVILN 691 (1007)
Q Consensus 681 ~~~s~l~vvlN 691 (1007)
+.++++.+.+.
T Consensus 745 d~~pa~~L~~~ 755 (917)
T COG0474 745 DSLPALALGVE 755 (917)
T ss_pred hhhhhheeecC
Confidence 87777766555
No 19
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=1.6e-80 Score=745.47 Aligned_cols=490 Identities=27% Similarity=0.365 Sum_probs=422.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcc-eEEec-CC--EEeeCCCcccCcEEEEeCCCcccccEEEEeceeeee
Q 001837 166 IVFLFTIAEWLESRASHKATAVMSSLMSIAPQK-AIIAG-TG--EEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGKCEVD 241 (1007)
Q Consensus 166 Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~~-~~V~r-dg--~~V~~~dLv~GDIV~L~~Ge~VPaDgiVl~G~~~VD 241 (1007)
+++..+++.++|.++++|+++.+++|+++.|.. ++|+| +| ++|++++|+|||+|+|++||+||+||+|++|.+.||
T Consensus 73 l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG~~~VD 152 (675)
T TIGR01497 73 LFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFAKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGVASVD 152 (675)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEccEEEE
Confidence 444567899999999999999999999988874 77765 77 789999999999999999999999999999999999
Q ss_pred cccCCCCCeeeEecCCCe---eeeceEEeeeeEEEEEEEEecceEEehhHHHHHHhhccchHHHHHHHHHHHhHhHHHHH
Q 001837 242 EKTLTGESYPVSKQKGST---VWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVDKFSQYYTPAVIF 318 (1007)
Q Consensus 242 ES~LTGES~Pv~K~~g~~---V~aGT~v~~G~~~~~V~~tG~~T~~gki~~lv~~a~~~ks~lq~~~~~i~~~~~~i~l~ 318 (1007)
||+|||||.||.|++|+. ||+||.|.+|.+.++|+++|.+|+++||.+++++++.+++|+|..++.+..++..++++
T Consensus 153 ESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li 232 (675)
T TIGR01497 153 ESAITGESAPVIKESGGDFASVTGGTRILSDWLVVECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLL 232 (675)
T ss_pred cccccCCCCceeecCCCCcceeecCcEEEeeEEEEEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHH
Confidence 999999999999999874 99999999999999999999999999999999999999999998888877665544333
Q ss_pred HHHHHHHHHHHhcCCchhHHHHHHhhhhhhhccccchhhHHHHHHHHHHHHHHcCCcccchhhhhhccCccEEEecCccc
Q 001837 319 ISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGT 398 (1007)
Q Consensus 319 ia~l~~l~~~~~~~~~~~~~~~~al~vLv~a~P~aL~l~i~la~~~a~~~lak~gilvk~~~~lE~Lg~vd~I~fDKTGT 398 (1007)
+.++ ++++..+.....++..++++++++|||+|+...+.....++.+|+++|+++|+++++|+||++|+||||||||
T Consensus 233 ~~~~---~~~~~~~~~~~~~~~~lvallV~aiP~aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGT 309 (675)
T TIGR01497 233 VTAT---LWPFAAYGGNAISVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGT 309 (675)
T ss_pred HHHH---HHHHHHhcChhHHHHHHHHHHHHhCchhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCc
Confidence 3222 2221111222335677899999999999998888888899999999999999999999999999999999999
Q ss_pred cccCceEEEEeecCCCCCCHHHHHHHHHhhhhcCCChHHHHHHHHhhhCCCCCCCC--CcccceeccCC-ceEEE--ECC
Q 001837 399 ITRGEFVMSEFQPLSEDINLNTLLYWVSSIESKSSHPMSAALVEYGRSLSIEPKPE--DVEDYQNFPGE-GIYGK--IGG 473 (1007)
Q Consensus 399 LT~g~~~v~~i~~~~~~~~~~~lL~~~asle~~s~hPi~~AIv~~a~~~~i~~~~~--~~~~~~~~~g~-Gi~~~--i~g 473 (1007)
||+|+|++.++++.+ ..+.++++.+++..+..+.||.++||++++++.+++.... ...++..+++. ++.+. .+|
T Consensus 310 LT~g~~~v~~~~~~~-~~~~~~ll~~aa~~~~~s~hP~a~Aiv~~a~~~~~~~~~~~~~~~~~~pf~~~~~~sg~~~~~g 388 (675)
T TIGR01497 310 ITLGNRLASEFIPAQ-GVDEKTLADAAQLASLADDTPEGKSIVILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLDNG 388 (675)
T ss_pred ccCCCeEEEEEEecC-CCcHHHHHHHHHHhcCCCCCcHHHHHHHHHHHcCCCccccccccceEEEEcCCCcEEEEEEeCC
Confidence 999999999998654 3567788888888899999999999999998877643211 12344555555 45554 378
Q ss_pred EEEEEecHHHHH----HhCCCCC----CCcCCcCCCCCeEEEEEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEE
Q 001837 474 EEIYIGNRKIAQ----RAGCGTV----PSVDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAML 545 (1007)
Q Consensus 474 ~~i~ig~~~~~~----~~~~~~~----~~~~~~~~~g~~~i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~ml 545 (1007)
+.+..|+++++. ..+.... ...+++..+|.++++++.|++++|++.++|++||+++++|++||++|++++|+
T Consensus 389 ~~~~kGa~e~i~~~~~~~g~~~~~~~~~~~~~~a~~G~r~l~va~~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~mi 468 (675)
T TIGR01497 389 RMIRKGAVDAIKRHVEANGGHIPTDLDQAVDQVARQGGTPLVVCEDNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMI 468 (675)
T ss_pred eEEEECCHHHHHHHHHhcCCCCcHHHHHHHHHHHhCCCeEEEEEECCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEE
Confidence 899999986643 2222211 11234567899999999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHhCCCcceEEeccCHhHHHHHHHHHhhCC-eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcC
Q 001837 546 TGDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEG-KTAMIGDGINDAPALATADIGISMGISGSALATETGQ 624 (1007)
Q Consensus 546 TGD~~~tA~~vA~~lGI~~~~V~ar~sPeqK~~iV~~Lq~~G-~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aAD 624 (1007)
|||+..+|.++|+++||+ .+|+|++|+||.++|+.+|+.| .|+|+|||+||+|||++|||||||| +|+++++++||
T Consensus 469 TGD~~~ta~~iA~~lGI~--~v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiAm~-~gt~~akeaad 545 (675)
T TIGR01497 469 TGDNRLTAAAIAAEAGVD--DFIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAAN 545 (675)
T ss_pred cCCCHHHHHHHHHHcCCC--EEEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCC
Confidence 999999999999999999 9999999999999999999998 8999999999999999999999999 89999999999
Q ss_pred EEEecCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001837 625 VILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAG 662 (1007)
Q Consensus 625 iVLl~~~l~~I~~lI~~gR~~~~~i~~ni~~al~~ni~ 662 (1007)
++++++||..|++++++||+++-+......|+++-++.
T Consensus 546 ivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~ 583 (675)
T TIGR01497 546 MVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVA 583 (675)
T ss_pred EEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHH
Confidence 99999999999999999999998888888888775553
No 20
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=8.2e-81 Score=789.47 Aligned_cols=620 Identities=18% Similarity=0.250 Sum_probs=481.1
Q ss_pred CCcccHHHHHHHhhh--------cccccccccccccccccCCCchHHHHHHHHHHHHHHHHhhhhHHHHHHHhhhhchHH
Q 001837 56 ALLISQHQIVKALNQ--------ARFEANVRAYGGTSYQKKWPSPYAMACGVLLAISILKYVYHPLRWFALGAVAIGIFP 127 (1007)
Q Consensus 56 ~~~~s~~~I~~aL~~--------aGy~as~~~~g~~~~~~~~~~~~~~~~gill~isl~~~~~~~l~~l~l~~~~~~~~p 127 (1007)
....+.+++.+.++. ...+.+...+|+|....+.+.+++. .|+..|++|+.|+++++++++..-
T Consensus 17 ~~~~~~~~~~~~l~t~~~~GLs~~e~~~rl~~~G~N~l~~~~~~~~~~--------~~l~~~~~~~~~iL~~aa~l~~~~ 88 (997)
T TIGR01106 17 DHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWV--------KFCRQLFGGFSMLLWIGAILCFLA 88 (997)
T ss_pred chhCCHHHHHHHhCcCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHH--------HHHHHHhcchHHHHHHHHHHHHHH
Confidence 334466776666643 2334456778999887665555543 256777788877665544432211
Q ss_pred HHHHHHHHHHcCcccHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcceEEecCC--
Q 001837 128 IILKGLAAIRNFKLDINILVLIAVIGTIAMNDYIEAGIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAIIAGTG-- 205 (1007)
Q Consensus 128 ~~~~a~~~l~~~~l~i~~Li~ia~~~~~~~~~y~~a~~Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~~~~V~rdg-- 205 (1007)
+. +.. ..+.. ...++|+++++++++++++.++..++++|+.+.+++|.++.|.+++|+|||
T Consensus 89 ~~---~~~-~~~~~-------------~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~ 151 (997)
T TIGR01106 89 YG---IQA-STEEE-------------PQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEK 151 (997)
T ss_pred HH---Hhh-ccCCC-------------cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEE
Confidence 00 000 00000 011356777788888888999999999999999999999999999999999
Q ss_pred EEeeCCCcccCcEEEEeCCCcccccEEEEece-eeeecccCCCCCeeeEecCCC----------eeeeceEEeeeeEEEE
Q 001837 206 EEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGK-CEVDEKTLTGESYPVSKQKGS----------TVWAGTINLNGYISVE 274 (1007)
Q Consensus 206 ~~V~~~dLv~GDIV~L~~Ge~VPaDgiVl~G~-~~VDES~LTGES~Pv~K~~g~----------~V~aGT~v~~G~~~~~ 274 (1007)
++|+++||+|||+|.|++||+|||||+|++|+ +.||||+|||||.|+.|.+++ ++|+||.+++|.+.++
T Consensus 152 ~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~ 231 (997)
T TIGR01106 152 MSINAEQVVVGDLVEVKGGDRIPADLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGI 231 (997)
T ss_pred EEeeHHHCCCCCEEEECCCCEEeeeEEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEE
Confidence 79999999999999999999999999999996 899999999999999998763 7999999999999999
Q ss_pred EEEEecceEEehhHHHHHHhhccchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHhcCCchhHHHHHHhhhhhhhccccc
Q 001837 275 TTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCAL 354 (1007)
Q Consensus 275 V~~tG~~T~~gki~~lv~~a~~~ks~lq~~~~~i~~~~~~i~l~ia~l~~l~~~~~~~~~~~~~~~~al~vLv~a~P~aL 354 (1007)
|++||.+|.+|++.+++.+++.+++|+++.+++++++++++++++++++++++++.+ .++...+.+++++++++||++|
T Consensus 232 V~~tG~~T~~g~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~v~v~~iP~~L 310 (997)
T TIGR01106 232 VVNTGDRTVMGRIASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLILG-YTWLEAVIFLIGIIVANVPEGL 310 (997)
T ss_pred EEEccccchhhHHHhhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCHHHHHHHHHHHHhhcCCccc
Confidence 999999999999999999888889999999999999999988888887777665544 4666778889999999999999
Q ss_pred hhhHHHHHHHHHHHHHHcCCcccchhhhhhccCccEEEecCccccccCceEEEEeecCCCC-------------CC----
Q 001837 355 ILSTPVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSED-------------IN---- 417 (1007)
Q Consensus 355 ~l~i~la~~~a~~~lak~gilvk~~~~lE~Lg~vd~I~fDKTGTLT~g~~~v~~i~~~~~~-------------~~---- 417 (1007)
+++++++++.++.+|+++|+++|+++++|+||++++||||||||||+|+|+|.+++..+.. .+
T Consensus 311 ~~~v~i~l~~~~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (997)
T TIGR01106 311 LATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSA 390 (997)
T ss_pred hHHHHHHHHHHHHHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccH
Confidence 9999999999999999999999999999999999999999999999999999998742210 11
Q ss_pred -HHHHHHHHHhhh----------------hcCCChHHHHHHHHhhhCCCCCCC--CCcccceeccCC---c-eEEEE---
Q 001837 418 -LNTLLYWVSSIE----------------SKSSHPMSAALVEYGRSLSIEPKP--EDVEDYQNFPGE---G-IYGKI--- 471 (1007)
Q Consensus 418 -~~~lL~~~asle----------------~~s~hPi~~AIv~~a~~~~i~~~~--~~~~~~~~~~g~---G-i~~~i--- 471 (1007)
.+.++..++... ...++|++.|+++++...+.+... ........+|.. . ....+
T Consensus 391 ~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~ 470 (997)
T TIGR01106 391 TWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENE 470 (997)
T ss_pred HHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEecc
Confidence 113444333321 124689999999998754332100 011112222221 1 11111
Q ss_pred C--C-E--EEEEecHHHHHHhC-------CCC-C---------CCcCCcCCCCCeEEEE---------------------
Q 001837 472 G--G-E--EIYIGNRKIAQRAG-------CGT-V---------PSVDGPKMKGNTIGYI--------------------- 508 (1007)
Q Consensus 472 ~--g-~--~i~ig~~~~~~~~~-------~~~-~---------~~~~~~~~~g~~~i~v--------------------- 508 (1007)
+ + . .+..|+++.+.... ... + ...+++..+|.+++.+
T Consensus 471 ~~~~~~~~~~~KGApe~Il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~ 550 (997)
T TIGR01106 471 DPRDPRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDV 550 (997)
T ss_pred CCCCceEEEEEeCChHHHHHHhhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhh
Confidence 1 1 1 24567776542211 000 0 0122344556665533
Q ss_pred ---EECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc--------------------
Q 001837 509 ---FSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN-------------------- 565 (1007)
Q Consensus 509 ---~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~-------------------- 565 (1007)
+.|++|+|+++++||+|++++++|++|+++||+++|+|||+..||.++|+++|+..+
T Consensus 551 ~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~ 630 (997)
T TIGR01106 551 NFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVN 630 (997)
T ss_pred hccccCcEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccc
Confidence 457789999999999999999999999999999999999999999999999999421
Q ss_pred -------------------------------eEEeccCHhHHHHHHHHHhhCC-eEEEEcCCccCHHHHhhCCeeEEeCC
Q 001837 566 -------------------------------VVHSELLPEDKAKIINQFKQEG-KTAMIGDGINDAPALATADIGISMGI 613 (1007)
Q Consensus 566 -------------------------------~V~ar~sPeqK~~iV~~Lq~~G-~VamVGDG~NDa~ALk~ADVGIAmg~ 613 (1007)
.||||++|+||.+||+.||+.| +|+|+|||+||+|||++||||||||.
T Consensus 631 ~~~~~~~vi~G~~l~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~ 710 (997)
T TIGR01106 631 PRDAKACVVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGI 710 (997)
T ss_pred cccccceEEEhHHhhhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCC
Confidence 2999999999999999999999 89999999999999999999999998
Q ss_pred CCcHHHHhhcCEEEecCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----h-------hHHHHHHHHHHH
Q 001837 614 SGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAGIIALALG----G-------HPLVWAAVLADV 682 (1007)
Q Consensus 614 ~gs~~A~~aADiVLl~~~l~~I~~lI~~gR~~~~~i~~ni~~al~~ni~~i~la~~----g-------~~~~~~ail~~~ 682 (1007)
+|+++|+++||+||++|+|..|+++|++||++|.|+++++.|.++.|+..+++.++ + ++.+|++++++.
T Consensus 711 ~G~~vak~aADivL~dd~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli~d~ 790 (997)
T TIGR01106 711 AGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDM 790 (997)
T ss_pred cccHHHHHhhceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999865433332 2 245788989998
Q ss_pred HHHHHHHHh--hhhhcccccC
Q 001837 683 GTCLIVILN--SMLLLHETHT 701 (1007)
Q Consensus 683 ~s~l~vvlN--Slrll~~~~~ 701 (1007)
++++.+... +-.+++++|+
T Consensus 791 lp~~al~~e~~~~~~m~~~P~ 811 (997)
T TIGR01106 791 VPAISLAYEKAESDIMKRQPR 811 (997)
T ss_pred HHHHHHhcCCCCcccccCCCc
Confidence 888877763 3444444444
No 21
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.7e-82 Score=731.62 Aligned_cols=515 Identities=21% Similarity=0.320 Sum_probs=414.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCcceEEecCC--EEeeCCCcccCcEEEEeCCCcccccEEEEece-eeeecccCC
Q 001837 170 FTIAEWLESRASHKATAVMSSLMSIAPQKAIIAGTG--EEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGK-CEVDEKTLT 246 (1007)
Q Consensus 170 ~~i~~~le~~~~~k~~~~l~~L~~~~p~~~~V~rdg--~~V~~~dLv~GDIV~L~~Ge~VPaDgiVl~G~-~~VDES~LT 246 (1007)
.+++.|-+.++-++.++. ....+..|+|+| ++|++.||++|||+.|+.||+|||||++++|+ +.||||++|
T Consensus 199 tA~nDy~qe~QF~~L~~~------k~~~k~~ViR~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn~L~iDESSlT 272 (1034)
T KOG0204|consen 199 TAVNDYRQELQFRKLQKE------KRNIKFQVIRGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGNSLKIDESSLT 272 (1034)
T ss_pred eecchhHHhhhhhhhhhh------hhceEEEEEECCEEEEEEEeeeeeccEEEeecCCccccceEEEeccceeEeccccc
Confidence 356677666665554422 234577899999 79999999999999999999999999999995 999999999
Q ss_pred CCCeeeEecC--CCeeeeceEEeeeeEEEEEEEEecceEEehhHHHHHHhhccchHHHHHHHHHHHhHhHHHHHHHHHHH
Q 001837 247 GESYPVSKQK--GSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVA 324 (1007)
Q Consensus 247 GES~Pv~K~~--g~~V~aGT~v~~G~~~~~V~~tG~~T~~gki~~lv~~a~~~ks~lq~~~~~i~~~~~~i~l~ia~l~~ 324 (1007)
|||.+++|.+ +.++++||++.+|.+++.||.+|.+|.+|+++.++.+....++|+|-++++++..+..+.++++++++
T Consensus 273 GESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~ 352 (1034)
T KOG0204|consen 273 GESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTF 352 (1034)
T ss_pred CCCcceeccCCCCCeEeecceeecCcceEEEEEeeecchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999965 78999999999999999999999999999999999998889999999999999999888888887777
Q ss_pred HHHHHhcC--------C-----------chhHHHHHHhhhhhhhccccchhhHHHHHHHHHHHHHHcCCcccchhhhhhc
Q 001837 325 VIPIALGV--------S-----------NHKQWFHLALVVLVSACPCALILSTPVVTYCALTKAATSGLLIKGGDYLQTL 385 (1007)
Q Consensus 325 l~~~~~~~--------~-----------~~~~~~~~al~vLv~a~P~aL~l~i~la~~~a~~~lak~gilvk~~~~lE~L 385 (1007)
++....++ . .+-.+|..++.++++|+|++||+++++++++++++|.+.+.|+|.+++.|++
T Consensus 353 ~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTilVVAVPEGLPLAVTLsLAys~kkMmkD~~LVRhL~ACETM 432 (1034)
T KOG0204|consen 353 IVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTILVVAVPEGLPLAVTLSLAYSMKKMMKDNNLVRHLDACETM 432 (1034)
T ss_pred HHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEEEEECCCCccHHHHHHHHHHHHHHhcchhHHHHhHHHhhc
Confidence 66443221 0 0122356678999999999999999999999999999999999999999999
Q ss_pred cCccEEEecCccccccCceEEEEeecCCCCCCH---------HHHHHH-HHh-----------------hhhcCCChHHH
Q 001837 386 AKVRFMAFDKTGTITRGEFVMSEFQPLSEDINL---------NTLLYW-VSS-----------------IESKSSHPMSA 438 (1007)
Q Consensus 386 g~vd~I~fDKTGTLT~g~~~v~~i~~~~~~~~~---------~~lL~~-~as-----------------le~~s~hPi~~ 438 (1007)
|..++||.|||||||.|+|+|++.+..++.+.. ..+..+ +.+ .....++|.|.
T Consensus 433 GsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~ 512 (1034)
T KOG0204|consen 433 GSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTEC 512 (1034)
T ss_pred CCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHH
Confidence 999999999999999999999997765433220 111111 111 22456899999
Q ss_pred HHHHHhhhCCCCCCCCCcc--cceeccC------CceEEEE-CCE--EEEEecHHHHHHhCCCC---------C------
Q 001837 439 ALVEYGRSLSIEPKPEDVE--DYQNFPG------EGIYGKI-GGE--EIYIGNRKIAQRAGCGT---------V------ 492 (1007)
Q Consensus 439 AIv~~a~~~~i~~~~~~~~--~~~~~~g------~Gi~~~i-~g~--~i~ig~~~~~~~~~~~~---------~------ 492 (1007)
||+.++..+|.+.+..+.+ -+..++. .|+..+. ++. ...-|..+......... .
T Consensus 513 AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~ 592 (1034)
T KOG0204|consen 513 ALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRK 592 (1034)
T ss_pred HHHHHHHHhCcchHhhcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHH
Confidence 9999999888764222211 1111221 1222221 222 12223333321110000 0
Q ss_pred ---CCcCCcCCCCCeEEE---------------------EEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCC
Q 001837 493 ---PSVDGPKMKGNTIGY---------------------IFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGD 548 (1007)
Q Consensus 493 ---~~~~~~~~~g~~~i~---------------------v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD 548 (1007)
..++.++.++.+.+. ...+++++|+++++||+|||++++|+.|+++||+|.|+|||
T Consensus 593 ~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGD 672 (1034)
T KOG0204|consen 593 SFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGD 672 (1034)
T ss_pred HHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCC
Confidence 002223333333332 33567899999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHhCCCcc---------------------------eEEeccCHhHHHHHHHHHhhCC-eEEEEcCCccCHH
Q 001837 549 NQSAAMQAQEQLGNALN---------------------------VVHSELLPEDKAKIINQFKQEG-KTAMIGDGINDAP 600 (1007)
Q Consensus 549 ~~~tA~~vA~~lGI~~~---------------------------~V~ar~sPeqK~~iV~~Lq~~G-~VamVGDG~NDa~ 600 (1007)
|..||++||.+|||..+ .|+||.+|.||..+|+.|++.| +||.+|||+||+|
T Consensus 673 NI~TAkAIA~eCGILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~VVAVTGDGTNDaP 752 (1034)
T KOG0204|consen 673 NINTAKAIARECGILTPGGDFLALEGKEFRELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEVVAVTGDGTNDAP 752 (1034)
T ss_pred cHHHHHHHHHHcccccCCCccceecchhhhhcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhcCcEEEEecCCCCCch
Confidence 99999999999999754 7999999999999999999999 9999999999999
Q ss_pred HHhhCCeeEEeCCCCcHHHHhhcCEEEecCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh----------
Q 001837 601 ALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAGIIALALGG---------- 670 (1007)
Q Consensus 601 ALk~ADVGIAmg~~gs~~A~~aADiVLl~~~l~~I~~lI~~gR~~~~~i~~ni~~al~~ni~~i~la~~g---------- 670 (1007)
||++||||+|||++|+++|||+|||||+||||++|+.+++|||..|.+|+|+++|.++.|++++++++.+
T Consensus 753 ALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~~~dsPLt 832 (1034)
T KOG0204|consen 753 ALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSACATGDSPLT 832 (1034)
T ss_pred hhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhhhcCCccHH
Confidence 9999999999999999999999999999999999999999999999999999999999999888777764
Q ss_pred -hHHHHHHHHHHHHHHHHHHH
Q 001837 671 -HPLVWAAVLADVGTCLIVIL 690 (1007)
Q Consensus 671 -~~~~~~ail~~~~s~l~vvl 690 (1007)
.+.+|.+++||.+.+|.+.-
T Consensus 833 AVQlLWVNLIMDTLgALALAT 853 (1034)
T KOG0204|consen 833 AVQLLWVNLIMDTLGALALAT 853 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHhcc
Confidence 36899999999998887765
No 22
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=1.7e-78 Score=763.65 Aligned_cols=543 Identities=21% Similarity=0.298 Sum_probs=440.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcceEEecCC--EEeeCCCcccCcEEEEeCCCcccccEEEEe
Q 001837 158 NDYIEAGIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAIIAGTG--EEVDAGEVKLNTVLAVKAGEVIPIDGIVVD 235 (1007)
Q Consensus 158 ~~y~~a~~Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~~~~V~rdg--~~V~~~dLv~GDIV~L~~Ge~VPaDgiVl~ 235 (1007)
.+|+++++|+++++++..+..++++|+++.+++|.++.+.+++|+||| ++|+++||||||+|.|++||+|||||+|++
T Consensus 34 ~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRdg~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~ 113 (917)
T TIGR01116 34 TAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRDGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLS 113 (917)
T ss_pred ccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEEHHHCCCCCEEEECCCCEeeccEEEEE
Confidence 478899999999999999999999999999999999999999999999 789999999999999999999999999999
Q ss_pred ce-eeeecccCCCCCeeeEecCC-------------CeeeeceEEeeeeEEEEEEEEecceEEehhHHHHHHhhccchHH
Q 001837 236 GK-CEVDEKTLTGESYPVSKQKG-------------STVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRI 301 (1007)
Q Consensus 236 G~-~~VDES~LTGES~Pv~K~~g-------------~~V~aGT~v~~G~~~~~V~~tG~~T~~gki~~lv~~a~~~ks~l 301 (1007)
|+ +.||||+|||||.|+.|.++ +++|+||.|.+|.+.++|++||.+|.+|+|.+++..++.+++|+
T Consensus 114 ~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~~G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~l 193 (917)
T TIGR01116 114 LKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPL 193 (917)
T ss_pred ecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEecceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCH
Confidence 95 99999999999999999875 88999999999999999999999999999999999988899999
Q ss_pred HHHHHHHHHhHhHHHHHHHHHHHHHHHHhcC-----Cc----hhHHHHHHhhhhhhhccccchhhHHHHHHHHHHHHHHc
Q 001837 302 QRFVDKFSQYYTPAVIFISACVAVIPIALGV-----SN----HKQWFHLALVVLVSACPCALILSTPVVTYCALTKAATS 372 (1007)
Q Consensus 302 q~~~~~i~~~~~~i~l~ia~l~~l~~~~~~~-----~~----~~~~~~~al~vLv~a~P~aL~l~i~la~~~a~~~lak~ 372 (1007)
|+.+++++.++++++++++++++++++.... .+ +..++..+++++++++|++|+++++++++.++++|+++
T Consensus 194 q~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~ 273 (917)
T TIGR01116 194 QKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKK 273 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHhhhhhccccccHHHHHHHHHHHHHHHHHC
Confidence 9999999999988877777776665432211 11 12234567889999999999999999999999999999
Q ss_pred CCcccchhhhhhccCccEEEecCccccccCceEEEEeecCCCC-------------CC-------------------HHH
Q 001837 373 GLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSED-------------IN-------------------LNT 420 (1007)
Q Consensus 373 gilvk~~~~lE~Lg~vd~I~fDKTGTLT~g~~~v~~i~~~~~~-------------~~-------------------~~~ 420 (1007)
++++|+++++|+||++|+||||||||||+|+|+|.+++..++. +. ...
T Consensus 274 ~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (917)
T TIGR01116 274 NAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEE 353 (917)
T ss_pred CcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcccccceEEecCCccCCCccccccCCcccccchHHHHH
Confidence 9999999999999999999999999999999999998754310 00 112
Q ss_pred HHHHHHhhhh-------------cCCChHHHHHHHHhhhCCCCCCCC------------------CcccceeccC----C
Q 001837 421 LLYWVSSIES-------------KSSHPMSAALVEYGRSLSIEPKPE------------------DVEDYQNFPG----E 465 (1007)
Q Consensus 421 lL~~~asle~-------------~s~hPi~~AIv~~a~~~~i~~~~~------------------~~~~~~~~~g----~ 465 (1007)
++..++.... ..++|++.|+++++.+.+++.... .......+|. +
T Consensus 354 l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK 433 (917)
T TIGR01116 354 LATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRK 433 (917)
T ss_pred HHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchhcccccccccccchhHHHHhhcceeeecccChhhC
Confidence 2222221110 136999999999998877543110 0011122222 1
Q ss_pred ceEEEEC--C-E-EEEEecHHHHHHhCCC-------CC-----------CCcCCcCC-CCCeEEEEE-------------
Q 001837 466 GIYGKIG--G-E-EIYIGNRKIAQRAGCG-------TV-----------PSVDGPKM-KGNTIGYIF------------- 509 (1007)
Q Consensus 466 Gi~~~i~--g-~-~i~ig~~~~~~~~~~~-------~~-----------~~~~~~~~-~g~~~i~v~------------- 509 (1007)
.+...+. + . .+.-|+++.+....-. .. ...+++.. +|.+++.++
T Consensus 434 ~msviv~~~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~ 513 (917)
T TIGR01116 434 SMSVLCKPSTGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLL 513 (917)
T ss_pred eEEEEEeeCCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCcccccccc
Confidence 2222221 2 2 2334777665332110 00 01234455 676666543
Q ss_pred ----------ECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc--------------
Q 001837 510 ----------SGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN-------------- 565 (1007)
Q Consensus 510 ----------~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~-------------- 565 (1007)
.|++|+|+++++||+|++++++|++||++||+++|+|||+..||.++|+++|+..+
T Consensus 514 ~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l 593 (917)
T TIGR01116 514 SDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREF 593 (917)
T ss_pred ccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHH
Confidence 46789999999999999999999999999999999999999999999999999641
Q ss_pred ---------------eEEeccCHhHHHHHHHHHhhCC-eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcCEEEec
Q 001837 566 ---------------VVHSELLPEDKAKIINQFKQEG-KTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMS 629 (1007)
Q Consensus 566 ---------------~V~ar~sPeqK~~iV~~Lq~~G-~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aADiVLl~ 629 (1007)
.||||++|+||.++|+.||+.| .|+|+|||+||+|||++|||||+|| +|+++++++||+++.+
T Consensus 594 ~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g-~g~~~ak~aAD~vl~d 672 (917)
T TIGR01116 594 DEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLAD 672 (917)
T ss_pred hhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECC-CCcHHHHHhcCeEEcc
Confidence 5999999999999999999998 8999999999999999999999999 8999999999999999
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----h-------hHHHHHHHHHHHHHHHHHHHh--hhhhc
Q 001837 630 NDIRKVPEAIRLARKAHWKVIENIAVSIATKAGIIALALG----G-------HPLVWAAVLADVGTCLIVILN--SMLLL 696 (1007)
Q Consensus 630 ~~l~~I~~lI~~gR~~~~~i~~ni~~al~~ni~~i~la~~----g-------~~~~~~ail~~~~s~l~vvlN--Slrll 696 (1007)
|+|..|++++++||++|.|+++++.|.++.|+..+++.++ + ++.+|++++++.++++.+.+. +-.++
T Consensus 673 d~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m 752 (917)
T TIGR01116 673 DNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALGIPEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIM 752 (917)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHh
Confidence 9999999999999999999999999999999964433332 3 246788888888887776653 33444
Q ss_pred ccccC
Q 001837 697 HETHT 701 (1007)
Q Consensus 697 ~~~~~ 701 (1007)
+++|+
T Consensus 753 ~~pP~ 757 (917)
T TIGR01116 753 WKPPR 757 (917)
T ss_pred cCCCC
Confidence 44443
No 23
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=6.7e-77 Score=758.19 Aligned_cols=578 Identities=19% Similarity=0.227 Sum_probs=443.2
Q ss_pred hhcccccccccccccccccCCCchHHHHHHHHHHHHHHHHhhhhHHHHHHHhhhhchHHHHHHHHHHHHcCcccHHHHHH
Q 001837 69 NQARFEANVRAYGGTSYQKKWPSPYAMACGVLLAISILKYVYHPLRWFALGAVAIGIFPIILKGLAAIRNFKLDINILVL 148 (1007)
Q Consensus 69 ~~aGy~as~~~~g~~~~~~~~~~~~~~~~gill~isl~~~~~~~l~~l~l~~~~~~~~p~~~~a~~~l~~~~l~i~~Li~ 148 (1007)
.+.....+...+|+|....+.+ +++- .+++.+.+|+.++.++++++
T Consensus 141 s~~e~~~r~~~yG~N~i~~~~~-s~~~--------ll~~~~~~p~~i~~i~~~~l------------------------- 186 (1054)
T TIGR01657 141 TTGDIAQRKAKYGKNEIEIPVP-SFLE--------LLKEEVLHPFYVFQVFSVIL------------------------- 186 (1054)
T ss_pred CHHHHHHHHHhcCCCeeecCCC-CHHH--------HHHHHHhchHHHHHHHHHHH-------------------------
Confidence 3344445566788887765443 3322 14555566665544332222
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcceEEecCC--EEeeCCCcccCcEEEEe--CC
Q 001837 149 IAVIGTIAMNDYIEAGIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAIIAGTG--EEVDAGEVKLNTVLAVK--AG 224 (1007)
Q Consensus 149 ia~~~~~~~~~y~~a~~Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~~~~V~rdg--~~V~~~dLv~GDIV~L~--~G 224 (1007)
+++.++|.++++++++++++.++..++++|+.+.++++.. .+..++|+||| ++|+++||+|||+|.|+ +|
T Consensus 187 -----~~~~~~~~~~~~i~~i~~~~~~~~~~~~~k~~~~L~~~~~-~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g 260 (1054)
T TIGR01657 187 -----WLLDEYYYYSLCIVFMSSTSISLSVYQIRKQMQRLRDMVH-KPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEE 260 (1054)
T ss_pred -----HHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCeeEEEEECCEEEEEEcccCCCCCEEEEecCCC
Confidence 2233456778888888889999999999999998888655 57789999999 78999999999999999 99
Q ss_pred CcccccEEEEeceeeeecccCCCCCeeeEecC------------------CCeeeeceEEee-------eeEEEEEEEEe
Q 001837 225 EVIPIDGIVVDGKCEVDEKTLTGESYPVSKQK------------------GSTVWAGTINLN-------GYISVETTAVA 279 (1007)
Q Consensus 225 e~VPaDgiVl~G~~~VDES~LTGES~Pv~K~~------------------g~~V~aGT~v~~-------G~~~~~V~~tG 279 (1007)
++||||++|++|++.||||+|||||.|+.|.+ ++++|+||.|++ |.+.++|++||
T Consensus 261 ~~iPaD~~ll~g~~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG 340 (1054)
T TIGR01657 261 KTMPCDSVLLSGSCIVNESMLTGESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTG 340 (1054)
T ss_pred CEecceEEEEeCcEEEecccccCCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCC
Confidence 99999999999999999999999999999975 236999999995 78999999999
Q ss_pred cceEEehhHHHHHHhhccchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHhcCCchhHHHHHHhhhhhhhccccchhhHH
Q 001837 280 EDCVVAKMAKLVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTP 359 (1007)
Q Consensus 280 ~~T~~gki~~lv~~a~~~ks~lq~~~~~i~~~~~~i~l~ia~l~~l~~~~~~~~~~~~~~~~al~vLv~a~P~aL~l~i~ 359 (1007)
.+|..|++.+++..++..++++++.+.++..++..+.++.++++++. .+....++...+.+++.++++++|++||++++
T Consensus 341 ~~T~~G~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~~-~~~~~~~~~~~~l~~l~iiv~~vP~~LP~~~t 419 (1054)
T TIGR01657 341 FSTSKGQLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTIIE-LIKDGRPLGKIILRSLDIITIVVPPALPAELS 419 (1054)
T ss_pred ccccchHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCcHHHHHHHHHHHHHhhcCchHHHHHH
Confidence 99999999999988888888998888887766544433332222222 12222466777899999999999999999999
Q ss_pred HHHHHHHHHHHHcCCcccchhhhhhccCccEEEecCccccccCceEEEEeecCCCCC------------CHHHHHHHHHh
Q 001837 360 VVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDI------------NLNTLLYWVSS 427 (1007)
Q Consensus 360 la~~~a~~~lak~gilvk~~~~lE~Lg~vd~I~fDKTGTLT~g~~~v~~i~~~~~~~------------~~~~lL~~~as 427 (1007)
++++.++.+|+++|+++|++.++|.+|++|++|||||||||+|+|+|.+++..+... ....++..++.
T Consensus 420 i~l~~~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 499 (1054)
T TIGR01657 420 IGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALAT 499 (1054)
T ss_pred HHHHHHHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccCchHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999998654211 11222333332
Q ss_pred hh-------hcCCChHHHHHHHHhhhCCCC-CC----------------CCCcccceeccCC----ceE--EEEC--CE-
Q 001837 428 IE-------SKSSHPMSAALVEYGRSLSIE-PK----------------PEDVEDYQNFPGE----GIY--GKIG--GE- 474 (1007)
Q Consensus 428 le-------~~s~hPi~~AIv~~a~~~~i~-~~----------------~~~~~~~~~~~g~----Gi~--~~i~--g~- 474 (1007)
.. ...++|++.|+++++....-. .. .........+|.. .+. .+.. ++
T Consensus 500 C~~~~~~~~~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~ 579 (1054)
T TIGR01657 500 CHSLTKLEGKLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSP 579 (1054)
T ss_pred CCeeEEECCEEecCHHHHHHHHhCCCEEECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeE
Confidence 22 245899999999986422100 00 0011111122221 111 2222 22
Q ss_pred -EEEEecHHHHHHhCCC-CCC-----CcCCcCCCCCeEEEEE---------------------ECCEEEEEEEecCcccc
Q 001837 475 -EIYIGNRKIAQRAGCG-TVP-----SVDGPKMKGNTIGYIF---------------------SGASPVGIFCLSDACRT 526 (1007)
Q Consensus 475 -~i~ig~~~~~~~~~~~-~~~-----~~~~~~~~g~~~i~v~---------------------~d~~~lGli~l~D~lR~ 526 (1007)
.+..|+++.+...... ..+ ..+++..+|.+++.++ .|++|+|+++|+||+||
T Consensus 580 ~~~~KGApE~Il~~c~~~~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~ 659 (1054)
T TIGR01657 580 DAFVKGAPETIQSLCSPETVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKP 659 (1054)
T ss_pred EEEEECCHHHHHHHcCCcCCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhcCceEEEEEEEecCCCc
Confidence 4566888877553221 111 2455677888887765 36789999999999999
Q ss_pred cHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc-----------------------------------------
Q 001837 527 GAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN----------------------------------------- 565 (1007)
Q Consensus 527 ~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~----------------------------------------- 565 (1007)
+++++|++|+++||+++|+|||++.||.+||+++||..+
T Consensus 660 ~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (1054)
T TIGR01657 660 DTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPL 739 (1054)
T ss_pred cHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcc
Confidence 999999999999999999999999999999999999410
Q ss_pred ----------------------------------------eEEeccCHhHHHHHHHHHhhCC-eEEEEcCCccCHHHHhh
Q 001837 566 ----------------------------------------VVHSELLPEDKAKIINQFKQEG-KTAMIGDGINDAPALAT 604 (1007)
Q Consensus 566 ----------------------------------------~V~ar~sPeqK~~iV~~Lq~~G-~VamVGDG~NDa~ALk~ 604 (1007)
.||||++|+||.++|+.||+.| .|+|+|||+||+||||+
T Consensus 740 ~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~ 819 (1054)
T TIGR01657 740 GQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQ 819 (1054)
T ss_pred cccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHh
Confidence 4999999999999999999999 99999999999999999
Q ss_pred CCeeEEeCCCCcHHHHhhcCEEEecCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----Hhh-----hHHHH
Q 001837 605 ADIGISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAGIIALA----LGG-----HPLVW 675 (1007)
Q Consensus 605 ADVGIAmg~~gs~~A~~aADiVLl~~~l~~I~~lI~~gR~~~~~i~~ni~~al~~ni~~i~la----~~g-----~~~~~ 675 (1007)
||||||||. +++ ..+||+++.+++|+.|+.+|++||+++.++++.+.|.+.|+++.+... +.| ++.+|
T Consensus 820 AdVGIam~~--~da-s~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~Q~l~ 896 (1054)
T TIGR01657 820 ADVGISLSE--AEA-SVAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSILYLIGSNLGDGQFLT 896 (1054)
T ss_pred cCcceeecc--ccc-eeecccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcCccHHHHH
Confidence 999999973 344 488999999999999999999999999999999999999998643222 222 24678
Q ss_pred HHHHHHHHHHHHHHH
Q 001837 676 AAVLADVGTCLIVIL 690 (1007)
Q Consensus 676 ~ail~~~~s~l~vvl 690 (1007)
+.++++.+.++.+..
T Consensus 897 i~li~~~~~~l~l~~ 911 (1054)
T TIGR01657 897 IDLLLIFPVALLMSR 911 (1054)
T ss_pred HHHHHHHHHHHHHHc
Confidence 887777665555544
No 24
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=1.6e-76 Score=704.74 Aligned_cols=483 Identities=29% Similarity=0.420 Sum_probs=430.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhc--cCCcceEEecCC-EEeeCCCcccCcEEEEeCCCcccccEEEEeceeeeecc
Q 001837 167 VFLFTIAEWLESRASHKATAVMSSLMS--IAPQKAIIAGTG-EEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGKCEVDEK 243 (1007)
Q Consensus 167 l~l~~i~~~le~~~~~k~~~~l~~L~~--~~p~~~~V~rdg-~~V~~~dLv~GDIV~L~~Ge~VPaDgiVl~G~~~VDES 243 (1007)
+++.+++.+++.++++++.+.+++|.+ ..|.+++++|+| ++|++++|+|||+|+|++||+|||||+|++|++.||||
T Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g~~~vdes 82 (499)
T TIGR01494 3 LILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNGWKEIPASDLVPGDIVLVKSGEIVPADGVLLSGSCFVDES 82 (499)
T ss_pred EEhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECCeEEEEHHHCCCCCEEEECCCCEeeeeEEEEEccEEEEcc
Confidence 456678889999999999999999998 889999999988 88999999999999999999999999999999999999
Q ss_pred cCCCCCeeeEecCCCeeeeceEEeeeeEEEEEEEEecceEEehhHHHHHHhhccchHHHHHHHHHH-HhHhHHHHHHHHH
Q 001837 244 TLTGESYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVDKFS-QYYTPAVIFISAC 322 (1007)
Q Consensus 244 ~LTGES~Pv~K~~g~~V~aGT~v~~G~~~~~V~~tG~~T~~gki~~lv~~a~~~ks~lq~~~~~i~-~~~~~i~l~ia~l 322 (1007)
+|||||.|+.|.+|+.+++||.+.+|.+.++|+++|.+|..+++..++..+...++++++..+++. .++++++++++++
T Consensus 83 ~LTGEs~pv~k~~g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~~ 162 (499)
T TIGR01494 83 NLTGESVPVLKTAGDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIALA 162 (499)
T ss_pred cccCCCCCeeeccCCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999998888999999999999 7999988888888
Q ss_pred HHHHHHHhcCC--chhHHHHHHhhhhhhhccccchhhHHHHHHHHHHHHHHcCCcccchhhhhhccCccEEEecCccccc
Q 001837 323 VAVIPIALGVS--NHKQWFHLALVVLVSACPCALILSTPVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTIT 400 (1007)
Q Consensus 323 ~~l~~~~~~~~--~~~~~~~~al~vLv~a~P~aL~l~i~la~~~a~~~lak~gilvk~~~~lE~Lg~vd~I~fDKTGTLT 400 (1007)
++++|++.... ++..++.+++++++++|||+|++++|+++..+..+++++|+++|+++++|+||++|++|||||||||
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~~v~~i~fDKTGTLT 242 (499)
T TIGR01494 163 VFLFWAIGLWDPNSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELGKVDYICSDKTGTLT 242 (499)
T ss_pred HHHHHHHHHcccccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhccCCcEEEeeCCCccc
Confidence 88776655433 3677899999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCceEEEEeecCCCCCCHHHHHHHHHhhhhcCCChHHHHHHHHhhhCCCCCCCCCcccceeccCCceEEEECC--EEEEE
Q 001837 401 RGEFVMSEFQPLSEDINLNTLLYWVSSIESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFPGEGIYGKIGG--EEIYI 478 (1007)
Q Consensus 401 ~g~~~v~~i~~~~~~~~~~~lL~~~asle~~s~hPi~~AIv~~a~~~~i~~~~~~~~~~~~~~g~Gi~~~i~g--~~i~i 478 (1007)
+|+|+|.++.+.+. ++.++||++.||+++++...+ ...+|...+ +|+...+++ ..+.+
T Consensus 243 ~~~~~v~~~~~~~~--------------~~~s~hp~~~ai~~~~~~~~~-----~~~~f~~~~-~~~~~~~~~~~~~~~~ 302 (499)
T TIGR01494 243 KNEMSFKKVSVLGG--------------EYLSGHPDERALVKSAKWKIL-----NVFEFSSVR-KRMSVIVRGPDGTYVK 302 (499)
T ss_pred cCceEEEEEEecCC--------------CcCCCChHHHHHHHHhhhcCc-----ceeccCCCC-ceEEEEEecCCcEEEe
Confidence 99999999986532 467899999999999975432 223444445 577777654 67889
Q ss_pred ecHHHHHHhCCCCCCCcCCcCCCCCeEEEEEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHH
Q 001837 479 GNRKIAQRAGCGTVPSVDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQE 558 (1007)
Q Consensus 479 g~~~~~~~~~~~~~~~~~~~~~~g~~~i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~ 558 (1007)
|+++++.+.........+.+..+|.++++++.+.+++|++.++|++|++++++|++|+++|++++|+|||++.+|..+|+
T Consensus 303 G~~~~i~~~~~~~~~~~~~~~~~g~~~~~~a~~~~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~ 382 (499)
T TIGR01494 303 GAPEFVLSRVKDLEEKVKELAQSGLRVLAVASKETLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAK 382 (499)
T ss_pred CCHHHHHHhhHHHHHHHHHHHhCCCEEEEEEECCeEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHH
Confidence 99988754321101112234567889999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCcceEEeccCHhHHHHHHHHHhhCC-eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcCEEEecCCcchHHH
Q 001837 559 QLGNALNVVHSELLPEDKAKIINQFKQEG-KTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPE 637 (1007)
Q Consensus 559 ~lGI~~~~V~ar~sPeqK~~iV~~Lq~~G-~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aADiVLl~~~l~~I~~ 637 (1007)
++|| +++++|+||.++|+.+|+.| .|+|+|||+||+|||++|||||+|| |+++||++|+++++..++.
T Consensus 383 ~lgi-----~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~------a~~~adivl~~~~l~~i~~ 451 (499)
T TIGR01494 383 ELGI-----FARVTPEEKAALVEALQKKGRVVAMTGDGVNDAPALKKADVGIAMG------AKAAADIVLLDDNLSTIVD 451 (499)
T ss_pred HcCc-----eeccCHHHHHHHHHHHHHCCCEEEEECCChhhHHHHHhCCCccccc------hHHhCCeEEecCCHHHHHH
Confidence 9997 89999999999999999999 8999999999999999999999996 6899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Q 001837 638 AIRLARKAHWKVIENIAVSIATKAGIIALALGGHPLVWAAVLADVG 683 (1007)
Q Consensus 638 lI~~gR~~~~~i~~ni~~al~~ni~~i~la~~g~~~~~~ail~~~~ 683 (1007)
++.+||++++++++|+.|+++||++++++++++++ .+.+++..
T Consensus 452 ~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~~~~---~~~~~~~~ 494 (499)
T TIGR01494 452 ALKEGRKTFSTIKSNIFWAIAYNLILIPLAALLAV---LNLVPPGL 494 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHhcch
Confidence 99999999999999999999999999999887653 44444433
No 25
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.8e-70 Score=631.11 Aligned_cols=515 Identities=21% Similarity=0.331 Sum_probs=408.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCcceEEecCC--EEeeCCCcccCcEEEEeCCCcccccEEEEece-eeeecccCCCCC
Q 001837 173 AEWLESRASHKATAVMSSLMSIAPQKAIIAGTG--EEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGK-CEVDEKTLTGES 249 (1007)
Q Consensus 173 ~~~le~~~~~k~~~~l~~L~~~~p~~~~V~rdg--~~V~~~dLv~GDIV~L~~Ge~VPaDgiVl~G~-~~VDES~LTGES 249 (1007)
......++..|..+.++++.++.|..+.|+||| ..+.++|||+||+|.++-|++||||.+|+++. ++||+|+|||||
T Consensus 139 tg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelVvGD~v~vk~GdrVPADiRiis~~g~~vdnsslTGes 218 (1019)
T KOG0203|consen 139 TGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELVVGDLVEVKGGDRVPADIRIISATGCKVDNSSLTGES 218 (1019)
T ss_pred EecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhhcccccceeeccCCcccceeEEEEecceeEecccccccc
Confidence 344555677888899999999999999999999 78999999999999999999999999999997 999999999999
Q ss_pred eeeEecC----------CCeeeeceEEeeeeEEEEEEEEecceEEehhHHHHHHhhccchHHHHHHHHHHHhHhHHHHHH
Q 001837 250 YPVSKQK----------GSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVDKFSQYYTPAVIFI 319 (1007)
Q Consensus 250 ~Pv~K~~----------g~~V~aGT~v~~G~~~~~V~~tG~~T~~gki~~lv~~a~~~ks~lq~~~~~i~~~~~~i~l~i 319 (1007)
.|..+.+ .|+-|.+|..++|.++++|++||.+|.+|+|+.+...-...++|+++.++++..+++...+++
T Consensus 219 EP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~~ 298 (1019)
T KOG0203|consen 219 EPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRTVMGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIFL 298 (1019)
T ss_pred CCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCceEEeehhhhhccCCCCCCcchhhhhchHHHHHHHHHHH
Confidence 9999865 478899999999999999999999999999999988888899999999999999999888888
Q ss_pred HHHHHHHHHHhcCCchhHHHHHHhhhhhhhccccchhhHHHHHHHHHHHHHHcCCcccchhhhhhccCccEEEecCcccc
Q 001837 320 SACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTI 399 (1007)
Q Consensus 320 a~l~~l~~~~~~~~~~~~~~~~al~vLv~a~P~aL~l~i~la~~~a~~~lak~gilvk~~~~lE~Lg~vd~I~fDKTGTL 399 (1007)
++.+|.+....+ ..+..++.+.+.++++.+|.+|+..+++.+....++|+++++++|+++++|+||...+||.||||||
T Consensus 299 ~i~fF~~~~~~g-y~~l~avv~~i~iivAnvPeGL~~tvTv~LtltakrMa~Knc~vknLeavetlGsts~I~SDktGTl 377 (1019)
T KOG0203|consen 299 GISFFILALILG-YEWLRAVVFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTL 377 (1019)
T ss_pred HHHHHHHHHhhc-chhHHHhhhhheeEEecCcCCccceehhhHHHHHHHHhhceeEEeeeeheeecccceeEeecceeeE
Confidence 888887766665 4666677779999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCceEEEEeecCCCCC------------------CHHHHHHHHHhhh----------------hcCCChHHHHHHHHhh
Q 001837 400 TRGEFVMSEFQPLSEDI------------------NLNTLLYWVSSIE----------------SKSSHPMSAALVEYGR 445 (1007)
Q Consensus 400 T~g~~~v~~i~~~~~~~------------------~~~~lL~~~asle----------------~~s~hPi~~AIv~~a~ 445 (1007)
|+|.|+|..+|....-. ...++++.+.... .-.+++.+.||++|+.
T Consensus 378 TqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e 457 (1019)
T KOG0203|consen 378 TQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIE 457 (1019)
T ss_pred EecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHH
Confidence 99999999988643211 0122222222110 1247899999999885
Q ss_pred hCCCCC--CCCCcccceeccCCc-----eEEE-----ECCEEEE--EecHHHHHHh------------------------
Q 001837 446 SLSIEP--KPEDVEDYQNFPGEG-----IYGK-----IGGEEIY--IGNRKIAQRA------------------------ 487 (1007)
Q Consensus 446 ~~~i~~--~~~~~~~~~~~~g~G-----i~~~-----i~g~~i~--ig~~~~~~~~------------------------ 487 (1007)
-..-.. -........++|.+. +.-. .+.+.+. -|.++...+.
T Consensus 458 ~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~a 537 (1019)
T KOG0203|consen 458 LILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEA 537 (1019)
T ss_pred HhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccceeecCCCCCcCHHHHHHHHHH
Confidence 321110 000000111111111 0000 0011111 1222221110
Q ss_pred -------CCC-------CCCCcCCcCCCCCeE-----EEEEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCC
Q 001837 488 -------GCG-------TVPSVDGPKMKGNTI-----GYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGD 548 (1007)
Q Consensus 488 -------~~~-------~~~~~~~~~~~g~~~-----i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD 548 (1007)
|.+ ..++. ....+..+ .+--.++.|+|++++.||||..+++++..||.+|||++|+|||
T Consensus 538 y~~lg~~GerVlgF~~~~l~~~--~~p~~~~f~~d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgd 615 (1019)
T KOG0203|consen 538 YLELGGLGERVLGFCDLELPDE--KFPRGFQFDTDDVNFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGD 615 (1019)
T ss_pred HHHhhhcchHHHHHHHHhcchh--cCCCceEeecCCCCCcchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecC
Confidence 000 00100 00011110 1112467899999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHhCCCcc---------------------------------------------------eEEeccCHhHHH
Q 001837 549 NQSAAMQAQEQLGNALN---------------------------------------------------VVHSELLPEDKA 577 (1007)
Q Consensus 549 ~~~tA~~vA~~lGI~~~---------------------------------------------------~V~ar~sPeqK~ 577 (1007)
++.||.++|++.||..+ .||||.+|+||+
T Consensus 616 hpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~~~~~qld~il~nh~eIVFARTSPqQKL 695 (1019)
T KOG0203|consen 616 HPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPDMSSEQLDELLQNHQEIVFARTSPQQKL 695 (1019)
T ss_pred ccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEecccccccCHHHHHHHHHhCCceEEEecCccceE
Confidence 99999999999997542 699999999999
Q ss_pred HHHHHHhhCC-eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcCEEEecCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 001837 578 KIINQFKQEG-KTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVS 656 (1007)
Q Consensus 578 ~iV~~Lq~~G-~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aADiVLl~~~l~~I~~lI~~gR~~~~~i~~ni~~a 656 (1007)
.||+..|++| .|+.+|||+||+||||.||||||||++|+++++++||+||+||||.+|+..+++||-+|.|+||.|+|.
T Consensus 696 iIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYT 775 (1019)
T KOG0203|consen 696 IIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYT 775 (1019)
T ss_pred EeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHhhcceEEecCcchhheeecccceehhhhHHHHHHHH
Confidence 9999999999 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHH----HHHHHHhhhHHH-------HHHHHHHHHHHHHHHH
Q 001837 657 IATKAG----IIALALGGHPLV-------WAAVLADVGTCLIVIL 690 (1007)
Q Consensus 657 l~~ni~----~i~la~~g~~~~-------~~ail~~~~s~l~vvl 690 (1007)
++.|+- ++++.++|+|+| .+.+..|+.+++.+..
T Consensus 776 LTsNipEI~PfL~fi~~giPLplgtitIL~IDLgTDmvPAiSLAY 820 (1019)
T KOG0203|consen 776 LTSNIPEITPFLLFILFGIPLPLGTVTILCIDLGTDIVPAISLAY 820 (1019)
T ss_pred HHhcchhHhHHHHHHHhCCCcccchhhhhhhHhhcccchhhhHhc
Confidence 999985 556666787653 3444455555555443
No 26
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.3e-68 Score=597.54 Aligned_cols=588 Identities=21% Similarity=0.312 Sum_probs=455.7
Q ss_pred ccccccccccccccccCCCchHHHHHHHHHHHHHHHHhhhhHHHHHHHhhhhchHHHHHHHHHHHHcCcccHHHHHHHHH
Q 001837 72 RFEANVRAYGGTSYQKKWPSPYAMACGVLLAISILKYVYHPLRWFALGAVAIGIFPIILKGLAAIRNFKLDINILVLIAV 151 (1007)
Q Consensus 72 Gy~as~~~~g~~~~~~~~~~~~~~~~gill~isl~~~~~~~l~~l~l~~~~~~~~p~~~~a~~~l~~~~l~i~~Li~ia~ 151 (1007)
+.+-+...+|+|+..++..+.+. -|+.+|+.|+.|+.-.+.+..+ .|+++--
T Consensus 41 E~~eRlk~fG~NkleEkken~~l---------KFl~Fm~~PlswVMEaAAimA~---------~Lang~~---------- 92 (942)
T KOG0205|consen 41 EVEERLKIFGPNKLEEKKESKFL---------KFLGFMWNPLSWVMEAAAIMAI---------GLANGGG---------- 92 (942)
T ss_pred HHHHHHHhhCchhhhhhhhhHHH---------HHHHHHhchHHHHHHHHHHHHH---------HHhcCCC----------
Confidence 33445566788877765555543 3677889999998765544321 1222110
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcceEEecCC--EEeeCCCcccCcEEEEeCCCcccc
Q 001837 152 IGTIAMNDYIEAGIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAIIAGTG--EEVDAGEVKLNTVLAVKAGEVIPI 229 (1007)
Q Consensus 152 ~~~~~~~~y~~a~~Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~~~~V~rdg--~~V~~~dLv~GDIV~L~~Ge~VPa 229 (1007)
---+|.+.+.|+.+++++..+...+++.+-.....|+.....++.|+||| .++++.+|||||||.++.|++|||
T Consensus 93 ----~~~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiPa 168 (942)
T KOG0205|consen 93 ----RPPDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRDGKWSEQEASILVPGDILSIKLGDIIPA 168 (942)
T ss_pred ----CCcchhhhhhhheeeeecceeeeeeccccchHHHHHHhccCcccEEeecCeeeeeeccccccCceeeeccCCEecC
Confidence 00267888888888888888888888888889999999888999999999 799999999999999999999999
Q ss_pred cEEEEece-eeeecccCCCCCeeeEecCCCeeeeceEEeeeeEEEEEEEEecceEEehhHHHHHHhhccchHHHHHHHHH
Q 001837 230 DGIVVDGK-CEVDEKTLTGESYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVDKF 308 (1007)
Q Consensus 230 DgiVl~G~-~~VDES~LTGES~Pv~K~~g~~V~aGT~v~~G~~~~~V~~tG~~T~~gki~~lv~~a~~~ks~lq~~~~~i 308 (1007)
|++|++|+ +.||+|+|||||.||.|.+|+.+|+||.+.+|++.++|++||..|++||-+.++.. ......+|+-++.+
T Consensus 169 DaRLl~gD~LkiDQSAlTGESLpvtKh~gd~vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVds-t~~~GHFqkVLt~I 247 (942)
T KOG0205|consen 169 DARLLEGDPLKIDQSALTGESLPVTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTGI 247 (942)
T ss_pred ccceecCCccccchhhhcCCccccccCCCCceecccccccceEEEEEEEeccceeehhhHHhhcC-CCCcccHHHHHHhh
Confidence 99999998 99999999999999999999999999999999999999999999999999999987 67788999999999
Q ss_pred HHhHhHHHHHHHHHHHHHHHHhcCCchhHHHHHHhhhhhhhccccchhhHHHHHHHHHHHHHHcCCcccchhhhhhccCc
Q 001837 309 SQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCALTKAATSGLLIKGGDYLQTLAKV 388 (1007)
Q Consensus 309 ~~~~~~i~l~ia~l~~l~~~~~~~~~~~~~~~~al~vLv~a~P~aL~l~i~la~~~a~~~lak~gilvk~~~~lE~Lg~v 388 (1007)
.++....+.+..++..++.+..............+.+++..+|.++|..+++.++.+..+|+++|.++|...++|.|+.+
T Consensus 248 Gn~ci~si~~g~lie~~vmy~~q~R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqgAItkrmtAIEemAGm 327 (942)
T KOG0205|consen 248 GNFCICSIALGMLIEITVMYPIQHRLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGM 327 (942)
T ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhheheeeecccccccceeeeehhhHHHHHHHhcccHHHHHHHHHHhhCc
Confidence 98876554444333333333333222222234445555556999999999999999999999999999999999999999
Q ss_pred cEEEecCccccccCceEEEE--eecCCCCCCHHHHHHHHHhh-hhcCCChHHHHHHHHhhhCCCCCCCCCcccceeccCC
Q 001837 389 RFMAFDKTGTITRGEFVMSE--FQPLSEDINLNTLLYWVSSI-ESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFPGE 465 (1007)
Q Consensus 389 d~I~fDKTGTLT~g~~~v~~--i~~~~~~~~~~~lL~~~asl-e~~s~hPi~~AIv~~a~~~~i~~~~~~~~~~~~~~g~ 465 (1007)
|++|.|||||||.|+++|.+ +..+.+..+.++++-.++.. .....+.+++|++....... .....+.+....|.+
T Consensus 328 dVLCSDKTGTLTlNkLSvdknl~ev~v~gv~~D~~~L~A~rAsr~en~DAID~A~v~~L~dPK--eara~ikevhF~PFn 405 (942)
T KOG0205|consen 328 DVLCSDKTGTLTLNKLSVDKNLIEVFVKGVDKDDVLLTAARASRKENQDAIDAAIVGMLADPK--EARAGIKEVHFLPFN 405 (942)
T ss_pred eEEeecCcCceeecceecCcCcceeeecCCChHHHHHHHHHHhhhcChhhHHHHHHHhhcCHH--HHhhCceEEeeccCC
Confidence 99999999999999999988 54455667777776555433 34567899999999875421 001112222233333
Q ss_pred ce----EEEE---CCEE--EEEecHHHHHHhCCCC--C-----CCcCCcCCCCCeEEEEEEC-------------CEEEE
Q 001837 466 GI----YGKI---GGEE--IYIGNRKIAQRAGCGT--V-----PSVDGPKMKGNTIGYIFSG-------------ASPVG 516 (1007)
Q Consensus 466 Gi----~~~i---~g~~--i~ig~~~~~~~~~~~~--~-----~~~~~~~~~g~~~i~v~~d-------------~~~lG 516 (1007)
-+ ..++ +|+. ..-|.+.+.-...-.. + ..++++..+|.+-+.+++. -+|+|
T Consensus 406 PV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~~~~g~pw~~~g 485 (942)
T KOG0205|consen 406 PVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTKESPGGPWEFVG 485 (942)
T ss_pred ccccceEEEEECCCCCEEEecCCChHHHHHHhhccCcchHHHHHHHHHHHHhcchhhhhhhhccccccccCCCCCccccc
Confidence 22 2222 3433 3457776642221111 1 1245666677766666532 27899
Q ss_pred EEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc----------------------------eEE
Q 001837 517 IFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN----------------------------VVH 568 (1007)
Q Consensus 517 li~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~----------------------------~V~ 568 (1007)
+.-+-||||.+..++|.+....|++|.|+|||....+...++++|+-.+ .=|
T Consensus 486 llp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie~adgf 565 (942)
T KOG0205|consen 486 LLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGF 565 (942)
T ss_pred ccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhccCc
Confidence 9999999999999999999999999999999999999999999997543 348
Q ss_pred eccCHhHHHHHHHHHhhCC-eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcCEEEecCCcchHHHHHHHHHHHHH
Q 001837 569 SELLPEDKAKIINQFKQEG-KTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHW 647 (1007)
Q Consensus 569 ar~sPeqK~~iV~~Lq~~G-~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aADiVLl~~~l~~I~~lI~~gR~~~~ 647 (1007)
|.+.|++|.++|+.||++| .++|+|||+||+|||+.||+||++. .++++|+.++|+||+++.++.+..++..+|.+|+
T Consensus 566 AgVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava-~atdaar~asdiVltepglSviI~avltSraIfq 644 (942)
T KOG0205|consen 566 AGVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQ 644 (942)
T ss_pred cccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeec-cchhhhcccccEEEcCCCchhhHHHHHHHHHHHH
Confidence 9999999999999999999 8999999999999999999999997 8899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhhhhc
Q 001837 648 KVIENIAVSIATKAGIIALALGGHPLVWAAVLADVGTCLIVILNSMLLL 696 (1007)
Q Consensus 648 ~i~~ni~~al~~ni~~i~la~~g~~~~~~ail~~~~s~l~vvlNSlrll 696 (1007)
+++.+..|++...+-++ +.++-+.+.|-.-+......++.++|.-..+
T Consensus 645 rmknytiyavsitiriv-~gfml~alIw~~df~pfmvliiailnd~t~m 692 (942)
T KOG0205|consen 645 RMKNYTIYAVSITIRIV-FGFMLIALIWEFDFSPFMVLIIAILNDGTIM 692 (942)
T ss_pred HHhhheeeeehhHHHHH-HHHHHHHHHHHhcCCHHHHHHHHHhcCCceE
Confidence 99999998887776544 3333344555554544455566777755544
No 27
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=2.1e-64 Score=645.18 Aligned_cols=551 Identities=17% Similarity=0.215 Sum_probs=408.4
Q ss_pred HHHHHHhhhhHHHHHHHhhhhchHHHHHHHHHHHHcCcccHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 001837 103 ISILKYVYHPLRWFALGAVAIGIFPIILKGLAAIRNFKLDINILVLIAVIGTIAMNDYIEAGIIVFLFTIAEWLESRASH 182 (1007)
Q Consensus 103 isl~~~~~~~l~~l~l~~~~~~~~p~~~~a~~~l~~~~l~i~~Li~ia~~~~~~~~~y~~a~~Il~l~~i~~~le~~~~~ 182 (1007)
..+++.|..+..+++++..++...|.+.. . -....++..++++++..+.+++|++.++
T Consensus 19 ~~l~~qf~~~~N~yfl~i~ilq~ip~~s~-----------~-----------~~~t~~~pL~~v~~~~~~~~~~ed~~r~ 76 (1057)
T TIGR01652 19 KNLFEQFKRFANLYFLVVALLQQVPILSP-----------T-----------YRGTSIVPLAFVLIVTAIKEAIEDIRRR 76 (1057)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHcCCCcCC-----------C-----------CccHhHHhHHHHHHHHHHHHHHHHHHHH
Confidence 34566666677776666666655542210 0 0011223334455677889999999999
Q ss_pred HHHHHHHHhhccCCcceEEecC-C--EEeeCCCcccCcEEEEeCCCcccccEEEEe-----ceeeeecccCCCCCeeeEe
Q 001837 183 KATAVMSSLMSIAPQKAIIAGT-G--EEVDAGEVKLNTVLAVKAGEVIPIDGIVVD-----GKCEVDEKTLTGESYPVSK 254 (1007)
Q Consensus 183 k~~~~l~~L~~~~p~~~~V~rd-g--~~V~~~dLv~GDIV~L~~Ge~VPaDgiVl~-----G~~~VDES~LTGES~Pv~K 254 (1007)
++++.++ +..++|+|+ | ++|+++||+|||+|.|++||+||||++|++ |.+.||||.|||||.|+.|
T Consensus 77 ~~d~~~n------~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k 150 (1057)
T TIGR01652 77 RRDKEVN------NRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLR 150 (1057)
T ss_pred HhHHHHh------CcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEe
Confidence 9887653 467888886 5 789999999999999999999999999997 6799999999999999998
Q ss_pred cC------------------------------------------------CCeeeeceEEee-eeEEEEEEEEecceEEe
Q 001837 255 QK------------------------------------------------GSTVWAGTINLN-GYISVETTAVAEDCVVA 285 (1007)
Q Consensus 255 ~~------------------------------------------------g~~V~aGT~v~~-G~~~~~V~~tG~~T~~g 285 (1007)
.+ .|++|+||.+.+ |.++++|++||.+|.++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~ 230 (1057)
T TIGR01652 151 QALEETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLM 230 (1057)
T ss_pred ecchhhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhh
Confidence 53 156789999998 99999999999999765
Q ss_pred hhHHHHHHhhccchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHhcCC----ch---------------hHHHHHHhhhh
Q 001837 286 KMAKLVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVS----NH---------------KQWFHLALVVL 346 (1007)
Q Consensus 286 ki~~lv~~a~~~ks~lq~~~~~i~~~~~~i~l~ia~l~~l~~~~~~~~----~~---------------~~~~~~al~vL 346 (1007)
+ +....+.+++++++.++++..++..+.++++++.+++..++... .+ ...+.+++.++
T Consensus 231 ~---n~~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~ 307 (1057)
T TIGR01652 231 R---NATQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILF 307 (1057)
T ss_pred h---cCCCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccchhHHHHHHHHHHHHH
Confidence 5 34445667899999999999988877777777666654332210 11 11355778888
Q ss_pred hhhccccchhhHHHHHHHHH------HHHHHc----CCcccchhhhhhccCccEEEecCccccccCceEEEEeecCCCCC
Q 001837 347 VSACPCALILSTPVVTYCAL------TKAATS----GLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDI 416 (1007)
Q Consensus 347 v~a~P~aL~l~i~la~~~a~------~~lak~----gilvk~~~~lE~Lg~vd~I~fDKTGTLT~g~~~v~~i~~~~~~~ 416 (1007)
..++|.+|++++.++..... .+|.++ ++++|+.+.+|+||+|++||+|||||||+|+|++.++...+..+
T Consensus 308 ~~~IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y 387 (1057)
T TIGR01652 308 SSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSY 387 (1057)
T ss_pred hhhcceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEe
Confidence 89999999999999999888 677764 59999999999999999999999999999999999986422100
Q ss_pred C---------------------------------------------------HHHHHHHHHhh-----h----------h
Q 001837 417 N---------------------------------------------------LNTLLYWVSSI-----E----------S 430 (1007)
Q Consensus 417 ~---------------------------------------------------~~~lL~~~asl-----e----------~ 430 (1007)
. ..+++..++.. + +
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y 467 (1057)
T TIGR01652 388 GDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITY 467 (1057)
T ss_pred cCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEE
Confidence 0 01122222111 1 1
Q ss_pred cCCChHHHHHHHHhhhCCCCCCCCC-------------cccce---eccC----CceEEEE---CCE--EEEEecHHHHH
Q 001837 431 KSSHPMSAALVEYGRSLSIEPKPED-------------VEDYQ---NFPG----EGIYGKI---GGE--EIYIGNRKIAQ 485 (1007)
Q Consensus 431 ~s~hPi~~AIv~~a~~~~i~~~~~~-------------~~~~~---~~~g----~Gi~~~i---~g~--~i~ig~~~~~~ 485 (1007)
.+++|+|.|++++++..|+...... ...++ .+|. +.+...+ +++ .+.-|.++.+.
T Consensus 468 ~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il 547 (1057)
T TIGR01652 468 QAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIF 547 (1057)
T ss_pred EccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHH
Confidence 2579999999999988876421100 01111 1111 1122222 222 22346654432
Q ss_pred Hh-CCC-------CCCCcCCcCCCCCeEEEE--------------------------------------EECCEEEEEEE
Q 001837 486 RA-GCG-------TVPSVDGPKMKGNTIGYI--------------------------------------FSGASPVGIFC 519 (1007)
Q Consensus 486 ~~-~~~-------~~~~~~~~~~~g~~~i~v--------------------------------------~~d~~~lGli~ 519 (1007)
.. ... ....++++..+|.+++.+ +.|++|+|+++
T Consensus 548 ~~~~~~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~g 627 (1057)
T TIGR01652 548 KRLSSGGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATA 627 (1057)
T ss_pred HHhhccchhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEE
Confidence 21 100 011134455667666544 35889999999
Q ss_pred ecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc----------------------------------
Q 001837 520 LSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN---------------------------------- 565 (1007)
Q Consensus 520 l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~---------------------------------- 565 (1007)
++|+||++++++|++|+++||++||+|||+++||.+||+++|+..+
T Consensus 628 ieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~ 707 (1057)
T TIGR01652 628 IEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFN 707 (1057)
T ss_pred EhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999997420
Q ss_pred --------------------------------------eEEeccCHhHHHHHHHHHhhC-C-eEEEEcCCccCHHHHhhC
Q 001837 566 --------------------------------------VVHSELLPEDKAKIINQFKQE-G-KTAMIGDGINDAPALATA 605 (1007)
Q Consensus 566 --------------------------------------~V~ar~sPeqK~~iV~~Lq~~-G-~VamVGDG~NDa~ALk~A 605 (1007)
.||||++|+||.+||+.+|+. | .|+|+|||+||+|||++|
T Consensus 708 ~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~A 787 (1057)
T TIGR01652 708 NLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEA 787 (1057)
T ss_pred hhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhc
Confidence 389999999999999999998 8 899999999999999999
Q ss_pred CeeEEeCCCCcH--HHHhhcCEEEecCCcchHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh------------
Q 001837 606 DIGISMGISGSA--LATETGQVILMSNDIRKVPEAI-RLARKAHWKVIENIAVSIATKAGIIALALGG------------ 670 (1007)
Q Consensus 606 DVGIAmg~~gs~--~A~~aADiVLl~~~l~~I~~lI-~~gR~~~~~i~~ni~~al~~ni~~i~la~~g------------ 670 (1007)
||||++ .|.+ .|+.+||++|. +|+.|.+++ .+||+.|+++.+.+.|.++.|++++++.++.
T Consensus 788 dVGIgi--~g~eg~qA~~aaD~~i~--~F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~~~ 863 (1057)
T TIGR01652 788 DVGVGI--SGKEGMQAVMASDFAIG--QFRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLY 863 (1057)
T ss_pred CeeeEe--cChHHHHHHHhhhhhhh--hHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHH
Confidence 999987 4555 68999999995 699999988 7799999999999999999998754443321
Q ss_pred --hHHHHHHHHHHHHHHHHH
Q 001837 671 --HPLVWAAVLADVGTCLIV 688 (1007)
Q Consensus 671 --~~~~~~ail~~~~s~l~v 688 (1007)
++.+|.+++++.++++++
T Consensus 864 ~~~~l~~~n~~~t~lp~~~l 883 (1057)
T TIGR01652 864 EGWYMVLYNVFFTALPVISL 883 (1057)
T ss_pred HHHHHHHHHHHHHhHHHHHH
Confidence 124566677777776666
No 28
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.5e-64 Score=589.71 Aligned_cols=532 Identities=21% Similarity=0.266 Sum_probs=408.4
Q ss_pred HHHHHHcCcccHHHHHHHH-HHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcceEEecCC--EEe
Q 001837 132 GLAAIRNFKLDINILVLIA-VIGTIAMNDYIEAGIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAIIAGTG--EEV 208 (1007)
Q Consensus 132 a~~~l~~~~l~i~~Li~ia-~~~~~~~~~y~~a~~Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~~~~V~rdg--~~V 208 (1007)
-++.+-+-.++...+..+. +++|+.-++|+++..|+++..++..+..+..++....++++... +..++|+|+| ++|
T Consensus 185 i~~iLv~EvL~PfYlFQ~fSv~lW~~d~Y~~YA~cI~iisv~Si~~sv~e~r~qs~rlr~mv~~-~~~V~V~R~g~~~ti 263 (1140)
T KOG0208|consen 185 ISQILVKEVLNPFYLFQAFSVALWLADSYYYYAFCIVIISVYSIVLSVYETRKQSIRLRSMVKF-TCPVTVIRDGFWETV 263 (1140)
T ss_pred HHHHHHHhccchHHHHHhHHhhhhhcccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEECCEEEEE
Confidence 3444555556666555444 44555556677778888888999999999999999999887763 4788999999 899
Q ss_pred eCCCcccCcEEEEeC-CCcccccEEEEeceeeeecccCCCCCeeeEecC-------------------CCeeeeceEEee
Q 001837 209 DAGEVKLNTVLAVKA-GEVIPIDGIVVDGKCEVDEKTLTGESYPVSKQK-------------------GSTVWAGTINLN 268 (1007)
Q Consensus 209 ~~~dLv~GDIV~L~~-Ge~VPaDgiVl~G~~~VDES~LTGES~Pv~K~~-------------------g~~V~aGT~v~~ 268 (1007)
+++|||||||+++.+ +-..|||++|++|++.||||+|||||.|+.|.+ .+++|.||.+++
T Consensus 264 ~S~eLVPGDil~i~~~~~~~PcDa~Li~g~civNEsmLTGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq 343 (1140)
T KOG0208|consen 264 DSSELVPGDILYIPPPGKIMPCDALLISGDCIVNESMLTGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQ 343 (1140)
T ss_pred eccccccccEEEECCCCeEeecceEEEeCcEEeecccccCCcccccccCCccccccCcCeeechhhcCcceeeccceEEE
Confidence 999999999999999 999999999999999999999999999999965 368999999997
Q ss_pred ------eeEEEEEEEEecceEEehhHHHHHHhhccchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHhcCCchhHHHHHH
Q 001837 269 ------GYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLA 342 (1007)
Q Consensus 269 ------G~~~~~V~~tG~~T~~gki~~lv~~a~~~ks~lq~~~~~i~~~~~~i~l~ia~l~~l~~~~~~~~~~~~~~~~a 342 (1007)
+.+.+.|+|||.+|.-|++.+.+..++.....+.+...+|...+..+.++..+..++. +.....+....+.++
T Consensus 344 ~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPkP~~fkfyrds~~fi~~l~~ia~~gfiy~~i~-l~~~g~~~~~iiirs 422 (1140)
T KOG0208|consen 344 ARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPKPVNFKFYRDSFKFILFLVIIALIGFIYTAIV-LNLLGVPLKTIIIRS 422 (1140)
T ss_pred eecCCCCceEEEEEeccccccccHHHHhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHhHh-HHHcCCCHHHHhhhh
Confidence 6699999999999999999999998777666666666666655544433333333333 223335778889999
Q ss_pred hhhhhhhccccchhhHHHHHHHHHHHHHHcCCcccchhhhhhccCccEEEecCccccccCceEEEEeecCCCCCCH----
Q 001837 343 LVVLVSACPCALILSTPVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDINL---- 418 (1007)
Q Consensus 343 l~vLv~a~P~aL~l~i~la~~~a~~~lak~gilvk~~~~lE~Lg~vd~I~fDKTGTLT~g~~~v~~i~~~~~~~~~---- 418 (1007)
+.++.+.+|+|||.++++...++.+||.|+||++.+|..+...|++|++|||||||||++.+.+-.+.+....-+.
T Consensus 423 LDliTi~VPPALPAaltvG~~~a~~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~ 502 (1140)
T KOG0208|consen 423 LDLITIVVPPALPAALTVGIIYAQSRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPEL 502 (1140)
T ss_pred hcEEEEecCCCchhhhhHHHHHHHHHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchh
Confidence 9999999999999999999999999999999999999999999999999999999999999999998875432110
Q ss_pred -----------------------HHHHHHHHhhh-------hcCCChHHHHHHHHhhhCC---------------CCCCC
Q 001837 419 -----------------------NTLLYWVSSIE-------SKSSHPMSAALVEYGRSLS---------------IEPKP 453 (1007)
Q Consensus 419 -----------------------~~lL~~~asle-------~~s~hPi~~AIv~~a~~~~---------------i~~~~ 453 (1007)
..+.+..+... ...++|++..+.+.....- +.+..
T Consensus 503 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHSL~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v 582 (1140)
T KOG0208|consen 503 KVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHSLTLVDGTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTV 582 (1140)
T ss_pred hhhhhhhccceeeccccccCCchHHHHHHHhhhceeEEeCCeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCE
Confidence 01111122111 1245677665554321100 00000
Q ss_pred CCccc--cee--ccCC---ce---------------EEEECC----EEEEEecHHHHHHhCC-CCCCC-----cCCcCCC
Q 001837 454 EDVED--YQN--FPGE---GI---------------YGKIGG----EEIYIGNRKIAQRAGC-GTVPS-----VDGPKMK 501 (1007)
Q Consensus 454 ~~~~~--~~~--~~g~---Gi---------------~~~i~g----~~i~ig~~~~~~~~~~-~~~~~-----~~~~~~~ 501 (1007)
..+.. +.. ..+. ++ .....+ ..+.-|+++.+.+... +..|. ++.+..+
T Consensus 583 ~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~tvP~dy~evl~~Yt~~ 662 (1140)
T KOG0208|consen 583 VRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPETVPADYQEVLKEYTHQ 662 (1140)
T ss_pred eCCCcccccCCCcCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCcccCCccHHHHHHHHHhC
Confidence 00000 000 0011 11 111111 2344588888755432 22332 4567778
Q ss_pred CCeEEEEE---------------------ECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh
Q 001837 502 GNTIGYIF---------------------SGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQL 560 (1007)
Q Consensus 502 g~~~i~v~---------------------~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~l 560 (1007)
|.+++.++ .|++|+|+|.|++++|+.++.+|++|++++||++|+||||..||..|||++
T Consensus 663 GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeC 742 (1140)
T KOG0208|consen 663 GFRVIALASKELETSTLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKEC 742 (1140)
T ss_pred CeEEEEEecCccCcchHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcc
Confidence 88887765 578999999999999999999999999999999999999999999999999
Q ss_pred CCCcc---------------------------------------------------------------------------
Q 001837 561 GNALN--------------------------------------------------------------------------- 565 (1007)
Q Consensus 561 GI~~~--------------------------------------------------------------------------- 565 (1007)
||..+
T Consensus 743 gmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l 822 (1140)
T KOG0208|consen 743 GMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPEL 822 (1140)
T ss_pred cccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHH
Confidence 98753
Q ss_pred --------eEEeccCHhHHHHHHHHHhhCC-eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcCEEEecCCcchHH
Q 001837 566 --------VVHSELLPEDKAKIINQFKQEG-KTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVP 636 (1007)
Q Consensus 566 --------~V~ar~sPeqK~~iV~~Lq~~G-~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aADiVLl~~~l~~I~ 636 (1007)
.|||||+|+||.++|+.||+.| .|+|+|||+||+.|||+||||||++.+ .|.-+|.+.---.+++.++
T Consensus 823 ~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAdvGISLSea---EASvAApFTSk~~~I~cVp 899 (1140)
T KOG0208|consen 823 VPKILLKGTVFARMSPDQKAELIEALQKLGYKVGFCGDGANDCGALKAADVGISLSEA---EASVAAPFTSKTPSISCVP 899 (1140)
T ss_pred HHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEEecCCCcchhhhhhhcccCcchhhh---hHhhcCccccCCCchhhHh
Confidence 6999999999999999999999 999999999999999999999999632 3445577766556999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001837 637 EAIRLARKAHWKVIENIAVSIATKAGIIALAL 668 (1007)
Q Consensus 637 ~lI~~gR~~~~~i~~ni~~al~~ni~~i~la~ 668 (1007)
.+|++||..+-+-..-+.|...|.++.....+
T Consensus 900 ~vIrEGRaALVTSf~~FkYMalYs~iqFisv~ 931 (1140)
T KOG0208|consen 900 DVIREGRAALVTSFACFKYMALYSAIQFISVV 931 (1140)
T ss_pred HHHhhhhhhhhhhHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999998888887544433
No 29
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7e-61 Score=531.89 Aligned_cols=473 Identities=29% Similarity=0.396 Sum_probs=389.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCc-ceEEecC-C--EEeeCCCcccCcEEEEeCCCcccccEEEEeceeeeecccC
Q 001837 170 FTIAEWLESRASHKATAVMSSLMSIAPQ-KAIIAGT-G--EEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGKCEVDEKTL 245 (1007)
Q Consensus 170 ~~i~~~le~~~~~k~~~~l~~L~~~~p~-~~~V~rd-g--~~V~~~dLv~GDIV~L~~Ge~VPaDgiVl~G~~~VDES~L 245 (1007)
.++..+-|..++.|....-.+|+..... .++++++ | +.|++.+|+.||+|+|++||+||.||.|++|.+.||||.+
T Consensus 76 VlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~asVdESAI 155 (681)
T COG2216 76 VLFANFAEAVAEGRGKAQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVASVDESAI 155 (681)
T ss_pred HHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEEeeeeecchhhc
Confidence 3566777777777777777777664433 4555554 5 8999999999999999999999999999999999999999
Q ss_pred CCCCeeeEecCC---CeeeeceEEeeeeEEEEEEEEecceEEehhHHHHHHhhccchHHHHHHHHHHHhHhHHHHHHHHH
Q 001837 246 TGESYPVSKQKG---STVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVDKFSQYYTPAVIFISAC 322 (1007)
Q Consensus 246 TGES~Pv~K~~g---~~V~aGT~v~~G~~~~~V~~tG~~T~~gki~~lv~~a~~~ks~lq~~~~~i~~~~~~i~l~ia~l 322 (1007)
||||.||.|++| +.|-.||.|++..++++++....+|++.||..+++.++++|+|.+-.+.-+..-++.++++..+.
T Consensus 156 TGESaPViresGgD~ssVtGgT~v~SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LTliFL~~~~T 235 (681)
T COG2216 156 TGESAPVIRESGGDFSSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLTLIFLLAVAT 235 (681)
T ss_pred cCCCcceeeccCCCcccccCCcEEeeeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999998 88999999999999999999999999999999999999999999988877766655544433322
Q ss_pred HHHHHHHhcCCchhHHHHHHhhhhhhhccccchhhHHHHHHHHHHHHHHcCCcccchhhhhhccCccEEEecCccccccC
Q 001837 323 VAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRG 402 (1007)
Q Consensus 323 ~~l~~~~~~~~~~~~~~~~al~vLv~a~P~aL~l~i~la~~~a~~~lak~gilvk~~~~lE~Lg~vd~I~fDKTGTLT~g 402 (1007)
++-+..+.+ .....+...+++++..+|-.++-.++-.-..++.|+.+.+++-++++++|..|.+|+++.|||||+|-|
T Consensus 236 l~p~a~y~~--g~~~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~G 313 (681)
T COG2216 236 LYPFAIYSG--GGAASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLG 313 (681)
T ss_pred hhhHHHHcC--CCCcCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeec
Confidence 222222221 111224566788899999998888888888899999999999999999999999999999999999999
Q ss_pred ceEEEEeecCCCCCCHHHHHHHHHhhhhcCCChHHHHHHHHhhhCCCCCCCCCcc-cceeccC------CceEEEECCEE
Q 001837 403 EFVMSEFQPLSEDINLNTLLYWVSSIESKSSHPMSAALVEYGRSLSIEPKPEDVE-DYQNFPG------EGIYGKIGGEE 475 (1007)
Q Consensus 403 ~~~v~~i~~~~~~~~~~~lL~~~asle~~s~hPi~~AIv~~a~~~~i~~~~~~~~-~~~~~~g------~Gi~~~i~g~~ 475 (1007)
+-.-.++.+.+. .+.+++...+....-.-+.|..++|++.+++.++........ ..+.+|. .|+.. -++++
T Consensus 314 nR~A~~f~p~~g-v~~~~la~aa~lsSl~DeTpEGrSIV~LA~~~~~~~~~~~~~~~~~fvpFtA~TRmSGvd~-~~~~~ 391 (681)
T COG2216 314 NRQASEFIPVPG-VSEEELADAAQLASLADETPEGRSIVELAKKLGIELREDDLQSHAEFVPFTAQTRMSGVDL-PGGRE 391 (681)
T ss_pred chhhhheecCCC-CCHHHHHHHHHHhhhccCCCCcccHHHHHHHhccCCCcccccccceeeecceecccccccC-CCCce
Confidence 999999998764 677777666554444567899999999999988664333222 1222222 12211 13467
Q ss_pred EEEecHHHHHH----hCCCCCC----CcCCcCCCCCeEEEEEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcC
Q 001837 476 IYIGNRKIAQR----AGCGTVP----SVDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTG 547 (1007)
Q Consensus 476 i~ig~~~~~~~----~~~~~~~----~~~~~~~~g~~~i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTG 547 (1007)
++-|..+-+.+ .+-...+ ..++.+..|.+++.+..|++++|+|.++|-++|+.+|-+.+||++|||++|+||
T Consensus 392 irKGA~dai~~~v~~~~g~~p~~l~~~~~~vs~~GGTPL~V~~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TG 471 (681)
T COG2216 392 IRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGGTPLVVVENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITG 471 (681)
T ss_pred eecccHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCceEEEECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeC
Confidence 88888654422 2222111 134566789999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhCCCcceEEeccCHhHHHHHHHHHhhCC-eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcCEE
Q 001837 548 DNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEG-KTAMIGDGINDAPALATADIGISMGISGSALATETGQVI 626 (1007)
Q Consensus 548 D~~~tA~~vA~~lGI~~~~V~ar~sPeqK~~iV~~Lq~~G-~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aADiV 626 (1007)
||+.||..||++.|++ ...|+.+||+|.++|+.-|.+| .|+|+|||+||+|||++||||+||. +|+++|+|++.+|
T Consensus 472 DN~~TAa~IA~EAGVD--dfiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMN-sGTqAAkEAaNMV 548 (681)
T COG2216 472 DNPLTAAAIAAEAGVD--DFIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMV 548 (681)
T ss_pred CCHHHHHHHHHHhCch--hhhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhc-cccHHHHHhhccc
Confidence 9999999999999999 9999999999999999999999 8999999999999999999999997 9999999999999
Q ss_pred EecCCcchHHHHHHHHHHHHHHH
Q 001837 627 LMSNDIRKVPEAIRLARKAHWKV 649 (1007)
Q Consensus 627 Ll~~~l~~I~~lI~~gR~~~~~i 649 (1007)
=+|+|+..+.+.+..|++..-+-
T Consensus 549 DLDS~PTKlievV~IGKqlLiTR 571 (681)
T COG2216 549 DLDSNPTKLIEVVEIGKQLLITR 571 (681)
T ss_pred ccCCCccceehHhhhhhhheeec
Confidence 99999999999999999876443
No 30
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=3.1e-58 Score=584.33 Aligned_cols=495 Identities=16% Similarity=0.188 Sum_probs=366.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcceEEecCC--EEeeCCCcccCcEEEEeCCCcccccEEEEe--
Q 001837 160 YIEAGIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAIIAGTG--EEVDAGEVKLNTVLAVKAGEVIPIDGIVVD-- 235 (1007)
Q Consensus 160 y~~a~~Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~~~~V~rdg--~~V~~~dLv~GDIV~L~~Ge~VPaDgiVl~-- 235 (1007)
+...++++++.++++++|++.++|+++.++ +..++|+++| +++++++|+|||+|.|++||+||||++|++
T Consensus 140 ~~PL~~vl~v~~ike~~Ed~~r~k~d~~~N------~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss 213 (1178)
T PLN03190 140 ILPLAFVLLVTAVKDAYEDWRRHRSDRIEN------NRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTS 213 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHhhc------CcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEecc
Confidence 345566777888999999999999998764 4678888888 789999999999999999999999999997
Q ss_pred ---ceeeeecccCCCCCeeeEecCC---------------------------------------------CeeeeceEEe
Q 001837 236 ---GKCEVDEKTLTGESYPVSKQKG---------------------------------------------STVWAGTINL 267 (1007)
Q Consensus 236 ---G~~~VDES~LTGES~Pv~K~~g---------------------------------------------~~V~aGT~v~ 267 (1007)
|.+.|||+.|||||.|+.|.++ +++++|+.+.
T Consensus 214 ~~~G~~~Vdts~LdGEt~~k~k~~~~~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~Lr 293 (1178)
T PLN03190 214 DPTGVAYVQTINLDGESNLKTRYAKQETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELK 293 (1178)
T ss_pred CCCceEEEEccccCCeeeeeEecccchhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceec
Confidence 8899999999999999999542 3455555555
Q ss_pred e-eeEEEEEEEEecceEEehhHHHHHHhhccchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHhc--CCc----------
Q 001837 268 N-GYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALG--VSN---------- 334 (1007)
Q Consensus 268 ~-G~~~~~V~~tG~~T~~gki~~lv~~a~~~ks~lq~~~~~i~~~~~~i~l~ia~l~~l~~~~~~--~~~---------- 334 (1007)
+ ..++++|++||.+|. ++.....++.+.+++++.++++..+++.+.++++++++++..++. ..+
T Consensus 294 nT~~i~GvVVYTG~dTK---~~~N~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~ 370 (1178)
T PLN03190 294 NTAWAIGVAVYCGRETK---AMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRR 370 (1178)
T ss_pred CCceEEEEEEEechhhh---HhhcCCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccc
Confidence 5 359999999999995 444444456788999999999999888877777766665532210 000
Q ss_pred ------------h----hH-H--HHHHhhhhhhhccccchhhHHHHHHHHHHHHHHcC----------Ccccchhhhhhc
Q 001837 335 ------------H----KQ-W--FHLALVVLVSACPCALILSTPVVTYCALTKAATSG----------LLIKGGDYLQTL 385 (1007)
Q Consensus 335 ------------~----~~-~--~~~al~vLv~a~P~aL~l~i~la~~~a~~~lak~g----------ilvk~~~~lE~L 385 (1007)
. .. . +..++.++...+|.+|++++.++.......+.++. +.+|+.+..|+|
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeL 450 (1178)
T PLN03190 371 KDFSEGGPKNYNYYGWGWEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDL 450 (1178)
T ss_pred cccccccccccccchhhHHHHHHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhh
Confidence 0 01 1 22234555588999999999999977666666543 779999999999
Q ss_pred cCccEEEecCccccccCceEEEEeecCCCCC-------------------------------------------C-----
Q 001837 386 AKVRFMAFDKTGTITRGEFVMSEFQPLSEDI-------------------------------------------N----- 417 (1007)
Q Consensus 386 g~vd~I~fDKTGTLT~g~~~v~~i~~~~~~~-------------------------------------------~----- 417 (1007)
|+|++|++|||||||+|+|++.++...+..+ +
T Consensus 451 GqV~yIfSDKTGTLT~N~M~fk~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (1178)
T PLN03190 451 GQIKYVFSDKTGTLTENKMEFQCASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAK 530 (1178)
T ss_pred ccceEEEEcCCCccccceEEEEEEEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhH
Confidence 9999999999999999999999875421000 0
Q ss_pred -HHHHHHHHHhh-------------------hhcCCChHHHHHHHHhhhCCCCCCCC-----------Ccccce---ecc
Q 001837 418 -LNTLLYWVSSI-------------------ESKSSHPMSAALVEYGRSLSIEPKPE-----------DVEDYQ---NFP 463 (1007)
Q Consensus 418 -~~~lL~~~asl-------------------e~~s~hPi~~AIv~~a~~~~i~~~~~-----------~~~~~~---~~~ 463 (1007)
..+++..++.+ ++.+++|.|.||+.+|...|+..... ....++ .++
T Consensus 531 ~i~~fl~~lalChtv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~p 610 (1178)
T PLN03190 531 HVHDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHE 610 (1178)
T ss_pred HHHHHHHHHHhcCCceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEec
Confidence 01122222211 13345899999999999988631100 011111 111
Q ss_pred C----CceEEEE---CCEE--EEEecHHHHHHhCCCC---------CCCcCCcCCCCCeEEE------------------
Q 001837 464 G----EGIYGKI---GGEE--IYIGNRKIAQRAGCGT---------VPSVDGPKMKGNTIGY------------------ 507 (1007)
Q Consensus 464 g----~Gi~~~i---~g~~--i~ig~~~~~~~~~~~~---------~~~~~~~~~~g~~~i~------------------ 507 (1007)
. +.+...+ ++.. +.-|.++.+....-.. ...+++++.+|.+++.
T Consensus 611 F~S~rKrMSvIv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~ 690 (1178)
T PLN03190 611 FDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSF 690 (1178)
T ss_pred ccccccEEEEEEEcCCCcEEEEEecCcHHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHH
Confidence 1 1122222 1221 2235444331110000 0112233344444332
Q ss_pred --------------------EEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc---
Q 001837 508 --------------------IFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL--- 564 (1007)
Q Consensus 508 --------------------v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~--- 564 (1007)
++.|++++|+++++|++|++++++|++|+++||++||+|||+..||.+||+++||..
T Consensus 691 ~~a~~~~~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~ 770 (1178)
T PLN03190 691 EAASTALIGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKM 770 (1178)
T ss_pred HHhhhhhhhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCC
Confidence 457899999999999999999999999999999999999999999999999776520
Q ss_pred ----------------------------------------------c-------------------------------eE
Q 001837 565 ----------------------------------------------N-------------------------------VV 567 (1007)
Q Consensus 565 ----------------------------------------------~-------------------------------~V 567 (1007)
+ .|
T Consensus 771 ~~i~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI 850 (1178)
T PLN03190 771 TQIIINSNSKESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVL 850 (1178)
T ss_pred eeEEecCCchhhHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEE
Confidence 0 37
Q ss_pred EeccCHhHHHHHHHHHhhC-C-eEEEEcCCccCHHHHhhCCeeEEeCCCCcH--HHHhhcCEEEecCCcchHHHHHH-HH
Q 001837 568 HSELLPEDKAKIINQFKQE-G-KTAMIGDGINDAPALATADIGISMGISGSA--LATETGQVILMSNDIRKVPEAIR-LA 642 (1007)
Q Consensus 568 ~ar~sPeqK~~iV~~Lq~~-G-~VamVGDG~NDa~ALk~ADVGIAmg~~gs~--~A~~aADiVLl~~~l~~I~~lI~-~g 642 (1007)
|||++|+||++||+.+|+. + .|+|+|||+||++||++|||||++ +|.+ .|..+||+++ ..|+-|.+|+. .|
T Consensus 851 ~cR~sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGI--sG~EG~qA~~aSDfaI--~~Fr~L~rLLlvHG 926 (1178)
T PLN03190 851 CCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGI--SGQEGRQAVMASDFAM--GQFRFLVPLLLVHG 926 (1178)
T ss_pred EecCCHHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeee--cCchhHHHHHhhccch--hhhHHHHHHHHHhC
Confidence 9999999999999999997 4 799999999999999999999976 5665 8999999999 78999999887 59
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 001837 643 RKAHWKVIENIAVSIATKAGIIALA 667 (1007)
Q Consensus 643 R~~~~~i~~ni~~al~~ni~~i~la 667 (1007)
|..|+++.+-+.|.+.-|+++.+..
T Consensus 927 r~~y~R~s~~i~y~fYKN~~~~~~q 951 (1178)
T PLN03190 927 HWNYQRMGYMILYNFYRNAVFVLVL 951 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998765443
No 31
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.1e-53 Score=485.28 Aligned_cols=471 Identities=19% Similarity=0.235 Sum_probs=343.7
Q ss_pred HcCcccHHHHHHHHHHHHHhhhhHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcceEEecCC--EEeeCCCc
Q 001837 137 RNFKLDINILVLIAVIGTIAMNDYIEA-GIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAIIAGTG--EEVDAGEV 213 (1007)
Q Consensus 137 ~~~~l~i~~Li~ia~~~~~~~~~y~~a-~~Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~~~~V~rdg--~~V~~~dL 213 (1007)
+.......+...++..+.|.+.+|++. .+-+|+++.-+.--.+++.++...+++ |...|..+.|.|++ +.+.++||
T Consensus 193 kE~A~aPfFVFQVFcvgLWCLDeyWYySlFtLfMli~fE~tlV~Qrm~~lse~R~-Mg~kpy~I~v~R~kKW~~l~seeL 271 (1160)
T KOG0209|consen 193 KEHAVAPFFVFQVFCVGLWCLDEYWYYSLFTLFMLIAFEATLVKQRMRTLSEFRT-MGNKPYTINVYRNKKWVKLMSEEL 271 (1160)
T ss_pred HHhccCceeeHhHHhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCceEEEEEecCcceecccccc
Confidence 333334444445556666666665554 445555555555556667777777766 44578888999988 88999999
Q ss_pred ccCcEEEEeC---CCcccccEEEEeceeeeecccCCCCCeeeEecC-----------------CCeeeeceEEee-----
Q 001837 214 KLNTVLAVKA---GEVIPIDGIVVDGKCEVDEKTLTGESYPVSKQK-----------------GSTVWAGTINLN----- 268 (1007)
Q Consensus 214 v~GDIV~L~~---Ge~VPaDgiVl~G~~~VDES~LTGES~Pv~K~~-----------------g~~V~aGT~v~~----- 268 (1007)
.|||+|.|.. ...||||.+|++|++.|||++|||||.|..|.+ ...+|+||++++
T Consensus 272 lPgDvVSI~r~~ed~~vPCDllLL~GsciVnEaMLtGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~ 351 (1160)
T KOG0209|consen 272 LPGDVVSIGRGAEDSHVPCDLLLLRGSCIVNEAMLTGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPK 351 (1160)
T ss_pred CCCceEEeccCcccCcCCceEEEEecceeechhhhcCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCc
Confidence 9999999998 678999999999999999999999999999964 357899999985
Q ss_pred --------eeEEEEEEEEecceEEehhHHHHHHhhccchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHhcCCch----h
Q 001837 269 --------GYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNH----K 336 (1007)
Q Consensus 269 --------G~~~~~V~~tG~~T~~gki~~lv~~a~~~ks~lq~~~~~i~~~~~~i~l~ia~l~~l~~~~~~~~~~----~ 336 (1007)
|-+.+.|++||.+|..|++.+.+....++-+...+ -+.+|..++++++++.+...|.-+..+. .
T Consensus 352 ~~slk~pDggc~a~VlrTGFeTSQGkLvRtilf~aervTaNn~----Etf~FILFLlVFAiaAa~Yvwv~Gskd~~RsrY 427 (1160)
T KOG0209|consen 352 KASLKTPDGGCVAYVLRTGFETSQGKLVRTILFSAERVTANNR----ETFIFILFLLVFAIAAAGYVWVEGSKDPTRSRY 427 (1160)
T ss_pred cccccCCCCCeEEEEEeccccccCCceeeeEEecceeeeeccH----HHHHHHHHHHHHHHHhhheEEEecccCcchhhh
Confidence 66889999999999999999887765444443222 2234444455555555555555553332 2
Q ss_pred HHHHHHhhhhhhhccccchhhHHHHHHHHHHHHHHcCCcccchhhhhhccCccEEEecCccccccCceEEEEeecCCCCC
Q 001837 337 QWFHLALVVLVSACPCALILSTPVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDI 416 (1007)
Q Consensus 337 ~~~~~al~vLv~a~P~aL~l~i~la~~~a~~~lak~gilvk~~~~lE~Lg~vd~I~fDKTGTLT~g~~~v~~i~~~~~~~ 416 (1007)
..+.-.+.+|...+|.-||+-+++++-.++..|+|.||+|..|-.+.-.|++|+.|||||||||+..|.|.++.....+.
T Consensus 428 KL~LeC~LIlTSVvPpELPmELSmAVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~ 507 (1160)
T KOG0209|consen 428 KLFLECTLILTSVVPPELPMELSMAVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADE 507 (1160)
T ss_pred heeeeeeEEEeccCCCCCchhhhHHHHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCc
Confidence 33555677888889999999999999999999999999999999999999999999999999999999999987643321
Q ss_pred C--------HHHHHHHHHh------hh-hcCCChHHHHHHHHhhhCCCCCC-----CCCcccceeccC---------Cce
Q 001837 417 N--------LNTLLYWVSS------IE-SKSSHPMSAALVEYGRSLSIEPK-----PEDVEDYQNFPG---------EGI 467 (1007)
Q Consensus 417 ~--------~~~lL~~~as------le-~~s~hPi~~AIv~~a~~~~i~~~-----~~~~~~~~~~~g---------~Gi 467 (1007)
. +.+.+..+++ +| ...++|+++|.++...+.--..+ .......+.+.. ..+
T Consensus 508 ~~~~~~s~~p~~t~~vlAscHsLv~le~~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsv 587 (1160)
T KOG0209|consen 508 GALTPASKAPNETVLVLASCHSLVLLEDKLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSV 587 (1160)
T ss_pred ccccchhhCCchHHHHHHHHHHHHHhcCcccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHh
Confidence 0 1222222222 23 45789999999998743211110 000001111100 001
Q ss_pred EEEECC----EEE---EEecHHHHHHhC----CCCCCCcCCcCCCCCeEEEE---------------------EECCEEE
Q 001837 468 YGKIGG----EEI---YIGNRKIAQRAG----CGTVPSVDGPKMKGNTIGYI---------------------FSGASPV 515 (1007)
Q Consensus 468 ~~~i~g----~~i---~ig~~~~~~~~~----~~~~~~~~~~~~~g~~~i~v---------------------~~d~~~l 515 (1007)
.+...+ ..+ .-|.++..+..- .++.....++.++|.+++.+ +.|++|.
T Consensus 588 va~~~~~g~s~k~~~aVKGAPEvi~~ml~dvP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFa 667 (1160)
T KOG0209|consen 588 VASHQGPGSSEKYFVAVKGAPEVIQEMLRDVPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFA 667 (1160)
T ss_pred hhhcccCCCceEEEEEecCCHHHHHHHHHhCchhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhhhhhcceee
Confidence 111111 111 125555432211 11112234456667666554 4688999
Q ss_pred EEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc------------------------------
Q 001837 516 GIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN------------------------------ 565 (1007)
Q Consensus 516 Gli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~------------------------------ 565 (1007)
|++.|.-|+|+|++++|++|.+.+.+++|+||||+.||.+||+++||...
T Consensus 668 GFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~ 747 (1160)
T KOG0209|consen 668 GFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLK 747 (1160)
T ss_pred eeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCC
Confidence 99999999999999999999999999999999999999999999998532
Q ss_pred -------------------------------------eEEeccCHhHHHHHHHHHhhCC-eEEEEcCCccCHHHHhhCCe
Q 001837 566 -------------------------------------VVHSELLPEDKAKIINQFKQEG-KTAMIGDGINDAPALATADI 607 (1007)
Q Consensus 566 -------------------------------------~V~ar~sPeqK~~iV~~Lq~~G-~VamVGDG~NDa~ALk~ADV 607 (1007)
.||||+.|.||..||..||+.| .++|+|||+||+.||++|||
T Consensus 748 p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhV 827 (1160)
T KOG0209|consen 748 PGKKKTLLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHV 827 (1160)
T ss_pred CCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhccc
Confidence 5899999999999999999999 89999999999999999999
Q ss_pred eEEeC
Q 001837 608 GISMG 612 (1007)
Q Consensus 608 GIAmg 612 (1007)
|||+-
T Consensus 828 GVALL 832 (1160)
T KOG0209|consen 828 GVALL 832 (1160)
T ss_pred ceehh
Confidence 99985
No 32
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-50 Score=459.20 Aligned_cols=492 Identities=17% Similarity=0.246 Sum_probs=366.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcceEEecCC-EEeeCCCcccCcEEEEeCCCcccccEEEEe-
Q 001837 158 NDYIEAGIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAIIAGTG-EEVDAGEVKLNTVLAVKAGEVIPIDGIVVD- 235 (1007)
Q Consensus 158 ~~y~~a~~Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~~~~V~rdg-~~V~~~dLv~GDIV~L~~Ge~VPaDgiVl~- 235 (1007)
..|...++++++.++.+.+++..+++.++..++ ...-+..|+| ...|+++|++||+|++..+++||||.++++
T Consensus 130 ty~~pl~fvl~itl~keavdd~~r~~rd~~~Ns-----e~y~~ltr~~~~~~~Ss~i~vGDvi~v~K~~RVPADmilLrT 204 (1051)
T KOG0210|consen 130 TYWGPLGFVLTITLIKEAVDDLKRRRRDRELNS-----EKYTKLTRDGTRREPSSDIKVGDVIIVHKDERVPADMILLRT 204 (1051)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh-----hhheeeccCCcccccccccccccEEEEecCCcCCcceEEEEc
Confidence 345667778888899999999999988877654 1234556788 566999999999999999999999999994
Q ss_pred ----ceeeeecccCCCCCeeeEecC-----------------------------------------------CCeeeece
Q 001837 236 ----GKCEVDEKTLTGESYPVSKQK-----------------------------------------------GSTVWAGT 264 (1007)
Q Consensus 236 ----G~~~VDES~LTGES~Pv~K~~-----------------------------------------------g~~V~aGT 264 (1007)
|++.|-+-.|+||+....|-| .|++|++|
T Consensus 205 sd~sg~~FiRTDQLDGETDWKLrl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanT 284 (1051)
T KOG0210|consen 205 SDKSGSCFIRTDQLDGETDWKLRLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANT 284 (1051)
T ss_pred cCCCCceEEeccccCCcccceeeccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeee
Confidence 679999999999997766621 37899999
Q ss_pred EEeeeeEEEEEEEEecceEEehhHHHHHHhhccchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHhcCCchhHHHHHHhh
Q 001837 265 INLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALV 344 (1007)
Q Consensus 265 ~v~~G~~~~~V~~tG~~T~~gki~~lv~~a~~~ks~lq~~~~~i~~~~~~i~l~ia~l~~l~~~~~~~~~~~~~~~~al~ 344 (1007)
+|.+|.+.+.|++||.+|.. .-+...++.+-..++..++-+.+++...+++++++....-- + ..+|..++.+++.
T Consensus 285 VvAs~t~~gvVvYTG~dtRs---vMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~g-~-~~~wyi~~~Rfll 359 (1051)
T KOG0210|consen 285 VVASGTAIGVVVYTGRDTRS---VMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMKG-F-GSDWYIYIIRFLL 359 (1051)
T ss_pred eEecCcEEEEEEEecccHHH---HhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhhc-C-CCchHHHHHHHHH
Confidence 99999999999999999842 11222334445567777888888888777777765433211 1 2467788899999
Q ss_pred hhhhhccccchhhHHHHHHHHHHHHHHc----CCcccchhhhhhccCccEEEecCccccccCceEEEEeecCCCCCCH--
Q 001837 345 VLVSACPCALILSTPVVTYCALTKAATS----GLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQPLSEDINL-- 418 (1007)
Q Consensus 345 vLv~a~P~aL~l~i~la~~~a~~~lak~----gilvk~~~~lE~Lg~vd~I~fDKTGTLT~g~~~v~~i~~~~~~~~~-- 418 (1007)
++...+|.+|-+-+.++...-.....+. |.++|+...-|.||+|.++.+|||||||+|+|++.++....-.++.
T Consensus 360 LFS~IIPISLRvnlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~ 439 (1051)
T KOG0210|consen 360 LFSSIIPISLRVNLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAET 439 (1051)
T ss_pred HHhhhceeEEEEehhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhH
Confidence 9999999999999999988777666653 7899999999999999999999999999999999988642211111
Q ss_pred ----------------------------------HHHHHHHHh-------------hhhcCCChHHHHHHHHhhhCCCCC
Q 001837 419 ----------------------------------NTLLYWVSS-------------IESKSSHPMSAALVEYGRSLSIEP 451 (1007)
Q Consensus 419 ----------------------------------~~lL~~~as-------------le~~s~hPi~~AIv~~a~~~~i~~ 451 (1007)
.++...++. +.++..+|.+.||+++-+..|+..
T Consensus 440 ~~eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L 519 (1051)
T KOG0210|consen 440 MDEVSQHIQSLYTPGRNKGKGALSRVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKL 519 (1051)
T ss_pred HHHHHHHHHHhhCCCcccccccchhhcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEE
Confidence 011111111 123456788888888877666542
Q ss_pred CCCC------------cccce---ecc------CCceEEEEC--CE-EEEEecHHHHHHhCCCC----CCCcCCcCCCCC
Q 001837 452 KPED------------VEDYQ---NFP------GEGIYGKIG--GE-EIYIGNRKIAQRAGCGT----VPSVDGPKMKGN 503 (1007)
Q Consensus 452 ~~~~------------~~~~~---~~~------g~Gi~~~i~--g~-~i~ig~~~~~~~~~~~~----~~~~~~~~~~g~ 503 (1007)
..++ ...|+ .+| ..||..+.+ ++ ...+...+..++.-... .++-.+++++|.
T Consensus 520 ~~Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~NdWleEE~gNMAREGL 599 (1051)
T KOG0210|consen 520 AKRDRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQYNDWLEEECGNMAREGL 599 (1051)
T ss_pred eecccceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhcccccchhhhhhhhhhhhhcc
Confidence 1111 11222 222 235554433 22 23333332221110000 112233445555
Q ss_pred eEEEE---------------------------------------EECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEE
Q 001837 504 TIGYI---------------------------------------FSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAM 544 (1007)
Q Consensus 504 ~~i~v---------------------------------------~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~m 544 (1007)
+.+.+ ++|++++|+.+++|+++++++.+++.||+||||+||
T Consensus 600 RtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWM 679 (1051)
T KOG0210|consen 600 RTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWM 679 (1051)
T ss_pred eEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEE
Confidence 55544 467899999999999999999999999999999999
Q ss_pred EcCCCHHHHHHHHHHhCCCcc----------------------------------------------------------e
Q 001837 545 LTGDNQSAAMQAQEQLGNALN----------------------------------------------------------V 566 (1007)
Q Consensus 545 lTGD~~~tA~~vA~~lGI~~~----------------------------------------------------------~ 566 (1007)
+|||..+||..+|+..++... .
T Consensus 680 LTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aV 759 (1051)
T KOG0210|consen 680 LTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAV 759 (1051)
T ss_pred EcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcE
Confidence 999999999999999987532 6
Q ss_pred EEeccCHhHHHHHHHHHhhC-C-eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcCEEEecCCcchHHHHHHH-HH
Q 001837 567 VHSELLPEDKAKIINQFKQE-G-KTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIRL-AR 643 (1007)
Q Consensus 567 V~ar~sPeqK~~iV~~Lq~~-G-~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aADiVLl~~~l~~I~~lI~~-gR 643 (1007)
|.+|++|.||+++++.||+. | .|+.+|||-||+.|+++||+||++-......|.-+||+.+ ..|..+.+++.+ ||
T Consensus 760 v~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSI--tqF~Hv~rLLl~HGR 837 (1051)
T KOG0210|consen 760 VCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSI--TQFSHVSRLLLWHGR 837 (1051)
T ss_pred EEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccchhccccH--HHHHHHHHHhhcccc
Confidence 89999999999999999998 6 8999999999999999999999874455567888999999 689999998876 99
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 001837 644 KAHWKVIENIAVSIATKA 661 (1007)
Q Consensus 644 ~~~~~i~~ni~~al~~ni 661 (1007)
..|++-.+--+|.+--.+
T Consensus 838 ~SYkrsa~laqfViHRGL 855 (1051)
T KOG0210|consen 838 NSYKRSAKLAQFVIHRGL 855 (1051)
T ss_pred chHHHHHHHHHHHHhhhH
Confidence 999988776666544443
No 33
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=7.3e-44 Score=439.70 Aligned_cols=492 Identities=18% Similarity=0.205 Sum_probs=363.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcceEEecCC---EEeeCCCcccCcEEEEeCCCcccccEEEEe-----
Q 001837 164 GIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAIIAGTG---EEVDAGEVKLNTVLAVKAGEVIPIDGIVVD----- 235 (1007)
Q Consensus 164 ~~Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~~~~V~rdg---~~V~~~dLv~GDIV~L~~Ge~VPaDgiVl~----- 235 (1007)
.+++.+.++.+.+|++.+++.++.+++ .++.|.+++ +...+.+|++||+|.+..++.+|||.+|++
T Consensus 88 ~~vl~~t~iKd~~eD~rR~~~D~~iN~------~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~ 161 (1151)
T KOG0206|consen 88 LFVLGITAIKDAIEDYRRHKQDKEVNN------RKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDED 161 (1151)
T ss_pred eeeehHHHHHHHHhhhhhhhccHHhhc------ceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCC
Confidence 456677789999999999999998865 456666643 789999999999999999999999999995
Q ss_pred ceeeeecccCCCCCeeeEecC-----------------------------------------------CCeeeeceEEee
Q 001837 236 GKCEVDEKTLTGESYPVSKQK-----------------------------------------------GSTVWAGTINLN 268 (1007)
Q Consensus 236 G~~~VDES~LTGES~Pv~K~~-----------------------------------------------g~~V~aGT~v~~ 268 (1007)
|.|+|+++.|+||+....|+. .+.++.|+++.+
T Consensus 162 ~~cyveT~nLDGEtnLK~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrN 241 (1151)
T KOG0206|consen 162 GICYVETANLDGETNLKVKQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRN 241 (1151)
T ss_pred ceeEEEEeecCCccccceeeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceecc
Confidence 459999999999999888732 235677888877
Q ss_pred -eeEEEEEEEEecceEEehhHHHHHHhhccchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHhcC-------------Cc
Q 001837 269 -GYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGV-------------SN 334 (1007)
Q Consensus 269 -G~~~~~V~~tG~~T~~gki~~lv~~a~~~ks~lq~~~~~i~~~~~~i~l~ia~l~~l~~~~~~~-------------~~ 334 (1007)
-.+.+.|+.+|.+|. ++.....++.+++++++.++++...+.+++++++++..+...+... .+
T Consensus 242 T~~v~G~vv~tG~dtK---~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 318 (1151)
T KOG0206|consen 242 TEWVYGVVVFTGHDTK---LMQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPS 318 (1151)
T ss_pred CcEEEEEEEEcCCcch---HHHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCc
Confidence 448899999999994 4555556888899999999999988888877777776654322211 00
Q ss_pred -----hhHHHHHHhhhhhhhccccchhhHHHHHHHHHHHHH----------HcCCcccchhhhhhccCccEEEecCcccc
Q 001837 335 -----HKQWFHLALVVLVSACPCALILSTPVVTYCALTKAA----------TSGLLIKGGDYLQTLAKVRFMAFDKTGTI 399 (1007)
Q Consensus 335 -----~~~~~~~al~vLv~a~P~aL~l~i~la~~~a~~~la----------k~gilvk~~~~lE~Lg~vd~I~fDKTGTL 399 (1007)
....+..++.++...+|.+|++++.+.......... .....+|..+..|.||+|++|+.||||||
T Consensus 319 ~~~~~~~~~f~t~~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTL 398 (1151)
T KOG0206|consen 319 EAAYAGFVHFLTFIILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTL 398 (1151)
T ss_pred hHHHHHHHHHHHHHhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCcc
Confidence 011245677788888999999999998877654332 24678999999999999999999999999
Q ss_pred ccCceEEEEeecCCCCCC----------------------------------------------HHHHHHHHH-------
Q 001837 400 TRGEFVMSEFQPLSEDIN----------------------------------------------LNTLLYWVS------- 426 (1007)
Q Consensus 400 T~g~~~v~~i~~~~~~~~----------------------------------------------~~~lL~~~a------- 426 (1007)
|+|.|++.++.+.+.++. ..+.+..++
T Consensus 399 T~N~M~F~kCsi~g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~ 478 (1151)
T KOG0206|consen 399 TQNSMEFKKCSINGTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIP 478 (1151)
T ss_pred ccceeeeecccccCcccccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeee
Confidence 999999988754321110 011112221
Q ss_pred -------hhhhcCCChHHHHHHHHhhhCCCCCCCCCcccceeccCCc-------------------eEEEE---CCEEEE
Q 001837 427 -------SIESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFPGEG-------------------IYGKI---GGEEIY 477 (1007)
Q Consensus 427 -------sle~~s~hPi~~AIv~~a~~~~i~~~~~~~~~~~~~~g~G-------------------i~~~i---~g~~i~ 477 (1007)
.+.+.+..|.+.|+++.|+..|+............ ...| +...+ +|+.+.
T Consensus 479 e~~~~~~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti-~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~L 557 (1151)
T KOG0206|consen 479 EKDEDSGKLSYEAESPDEAALVEAARELGFVFLGRTPDSVTI-RELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILL 557 (1151)
T ss_pred ccCCCccceeeecCCCcHHHHHHHHHhcCceeeeccCceEEE-eccccceeEEEEEEeccccccceeEEEEEcCCCcEEE
Confidence 12455678999999999999987642221111111 1222 11111 122111
Q ss_pred E--ecHH-HHHHhCCC---C----CCCcCCcCCCCCeEE--------------------------------------EEE
Q 001837 478 I--GNRK-IAQRAGCG---T----VPSVDGPKMKGNTIG--------------------------------------YIF 509 (1007)
Q Consensus 478 i--g~~~-~~~~~~~~---~----~~~~~~~~~~g~~~i--------------------------------------~v~ 509 (1007)
. |... +++++... . ...+++++.+|.+.+ .++
T Consensus 558 ycKGADsvI~erL~~~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iE 637 (1151)
T KOG0206|consen 558 YCKGADSVIFERLSKNGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIE 637 (1151)
T ss_pred EEcCcchhhHhhhhhcchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHH
Confidence 1 2211 11111100 0 011222333333322 256
Q ss_pred ECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc-------------------------
Q 001837 510 SGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL------------------------- 564 (1007)
Q Consensus 510 ~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~------------------------- 564 (1007)
+|+.++|..++||+++++++++|+.|++||||+||||||..+||.+|+-.|++..
T Consensus 638 k~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~ 717 (1151)
T KOG0206|consen 638 KDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAAL 717 (1151)
T ss_pred hcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHH
Confidence 8999999999999999999999999999999999999999999999998887531
Q ss_pred ----------------------c-------------------------------eEEeccCHhHHHHHHHHHhhC-C-eE
Q 001837 565 ----------------------N-------------------------------VVHSELLPEDKAKIINQFKQE-G-KT 589 (1007)
Q Consensus 565 ----------------------~-------------------------------~V~ar~sPeqK~~iV~~Lq~~-G-~V 589 (1007)
+ ++.+|++|.||+.+|+..++. + .+
T Consensus 718 ~~~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~T 797 (1151)
T KOG0206|consen 718 KETLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVT 797 (1151)
T ss_pred HHHHHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceE
Confidence 1 689999999999999999865 5 89
Q ss_pred EEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcCEEEecCCcchHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001837 590 AMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIR-LARKAHWKVIENIAVSIATKAGIIALA 667 (1007)
Q Consensus 590 amVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aADiVLl~~~l~~I~~lI~-~gR~~~~~i~~ni~~al~~ni~~i~la 667 (1007)
++||||+||++|+++|||||+++..+...|..+||+.+ ..|+-+.+++. .||+.|.++.+.+.|.++.|+.+....
T Consensus 798 LAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AI--aqFrfL~rLLLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~ 874 (1151)
T KOG0206|consen 798 LAIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAI--AQFRFLERLLLVHGHWSYIRLAKMILYFFYKNIAFTFTL 874 (1151)
T ss_pred EEeeCCCccchheeeCCcCeeeccchhhhhhhcccchH--HHHHHHhhhheeecceeHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999987666678999999998 56777777654 499999999999999999998755443
No 34
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=100.00 E-value=3.7e-34 Score=307.52 Aligned_cols=220 Identities=27% Similarity=0.461 Sum_probs=200.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcc-eEEecCC--EEeeCCCcccCcEEEEeCCCcccccEEEEe-ceeee
Q 001837 165 IIVFLFTIAEWLESRASHKATAVMSSLMSIAPQK-AIIAGTG--EEVDAGEVKLNTVLAVKAGEVIPIDGIVVD-GKCEV 240 (1007)
Q Consensus 165 ~Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~~-~~V~rdg--~~V~~~dLv~GDIV~L~~Ge~VPaDgiVl~-G~~~V 240 (1007)
+++++++++.+++.++++|+++.++++.+..+.+ +.|.|+| +.|+++||+|||+|.|++||+|||||+|++ |.+.|
T Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g~~~v 80 (230)
T PF00122_consen 1 VILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESGSAYV 80 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESSEEEE
T ss_pred CEEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceecccccc
Confidence 3677888999999999999999999999988887 8899999 899999999999999999999999999999 99999
Q ss_pred ecccCCCCCeeeEec-----CCCeeeeceEEeeeeEEEEEEEEecceEEehhHHHHHHhhccchHHHHHHHHHHHhHhHH
Q 001837 241 DEKTLTGESYPVSKQ-----KGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEEAQNSKSRIQRFVDKFSQYYTPA 315 (1007)
Q Consensus 241 DES~LTGES~Pv~K~-----~g~~V~aGT~v~~G~~~~~V~~tG~~T~~gki~~lv~~a~~~ks~lq~~~~~i~~~~~~i 315 (1007)
|||.||||+.|+.|. +++.+|+||.+.+|.+.++|++||.+|.++++.+.+.+.+.+++++++.++++..+++++
T Consensus 81 d~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (230)
T PF00122_consen 81 DESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIII 160 (230)
T ss_dssp ECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhc
Confidence 999999999999999 999999999999999999999999999999999999888888899999999999999999
Q ss_pred HHHHHHHHHHHHHH-hcCCchhHHHHHHhhhhhhhccccchhhHHHHHHHHHHHHHHcCCcccchhhhhh
Q 001837 316 VIFISACVAVIPIA-LGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCALTKAATSGLLIKGGDYLQT 384 (1007)
Q Consensus 316 ~l~ia~l~~l~~~~-~~~~~~~~~~~~al~vLv~a~P~aL~l~i~la~~~a~~~lak~gilvk~~~~lE~ 384 (1007)
++++++++++++++ ....++...+..+++++++++|++|++++|++...++.++.++|+++|+++++|.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 161 ILAIAILVFIIWFFNDSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNLSALEA 230 (230)
T ss_dssp HHHHHHHHHHHCHTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESSTTHHHH
T ss_pred ccccchhhhccceecccccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCcccccC
Confidence 98888887766554 2345677788999999999999999999999999999999999999999999985
No 35
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.95 E-value=5.8e-29 Score=262.35 Aligned_cols=207 Identities=34% Similarity=0.556 Sum_probs=172.6
Q ss_pred ccEEEecCccccccCceEEEEeecCCCCCCHHHHHHHHHhhhhcCCChHHHHHHHHhhhCCCCCCCCCcccceeccCCce
Q 001837 388 VRFMAFDKTGTITRGEFVMSEFQPLSEDINLNTLLYWVSSIESKSSHPMSAALVEYGRSLSIEPKPEDVEDYQNFPGEGI 467 (1007)
Q Consensus 388 vd~I~fDKTGTLT~g~~~v~~i~~~~~~~~~~~lL~~~asle~~s~hPi~~AIv~~a~~~~i~~~~~~~~~~~~~~g~Gi 467 (1007)
|++||||||||||++++.+ .. +....++.++...+..+.||++.+++.++....... . ...+...++.|+
T Consensus 1 i~~i~fDktGTLt~~~~~v---~~----~~~~~~~~~~~~~~~~s~~p~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~ 70 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSV---AP----PSNEAALAIAAALEQGSEHPIGKAIVEFAKNHQWSK--S-LESFSEFIGRGI 70 (215)
T ss_dssp ESEEEEECCTTTBESHHEE---ES----CSHHHHHHHHHHHHCTSTSHHHHHHHHHHHHHHHHS--C-CEEEEEETTTEE
T ss_pred CeEEEEecCCCcccCeEEE---Ee----ccHHHHHHHHHHhhhcCCCcchhhhhhhhhhccchh--h-hhhheeeeeccc
Confidence 6899999999999999999 11 567888899999999999999999999887632211 1 677888999999
Q ss_pred EEEECCEEEEEecHHHHHHhCCCCC---CCcCCcCCCCCeEEEEEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEE
Q 001837 468 YGKIGGEEIYIGNRKIAQRAGCGTV---PSVDGPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAM 544 (1007)
Q Consensus 468 ~~~i~g~~i~ig~~~~~~~~~~~~~---~~~~~~~~~g~~~i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~m 544 (1007)
.+.+++. +. |+.+++.+...... .........+.+.++++.++.++|.+.+.|++||+++++|++|+++|++++|
T Consensus 71 ~~~~~~~-~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i 148 (215)
T PF00702_consen 71 SGDVDGI-YL-GSPEWIHELGIRVISPDLVEEIQESQGRTVIVLAVNLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAI 148 (215)
T ss_dssp EEEEHCH-EE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEESHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEE
T ss_pred ccccccc-cc-ccchhhhhccccccccchhhhHHHhhCCcccceeecCeEEEEEeecCcchhhhhhhhhhhhccCcceee
Confidence 9998877 44 88887654433210 0001112334556677779999999999999999999999999999999999
Q ss_pred EcCCCHHHHHHHHHHhCCCcceEEecc--CHhHH--HHHHHHHhhCC-eEEEEcCCccCHHHHhhCC
Q 001837 545 LTGDNQSAAMQAQEQLGNALNVVHSEL--LPEDK--AKIINQFKQEG-KTAMIGDGINDAPALATAD 606 (1007)
Q Consensus 545 lTGD~~~tA~~vA~~lGI~~~~V~ar~--sPeqK--~~iV~~Lq~~G-~VamVGDG~NDa~ALk~AD 606 (1007)
+|||+..+|.++++++||....||+++ +|++| .++|+.||..+ .|+|||||+||++||++||
T Consensus 149 ~TGD~~~~a~~~~~~lgi~~~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 149 LTGDNESTASAIAKQLGIFDSIVFARVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp EESSEHHHHHHHHHHTTSCSEEEEESHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred eeccccccccccccccccccccccccccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 999999999999999999866699999 99999 99999999664 9999999999999999997
No 36
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.61 E-value=3.9e-15 Score=140.95 Aligned_cols=126 Identities=25% Similarity=0.366 Sum_probs=110.2
Q ss_pred CCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEEeccCHhHHHHHHHHHhhCC-eE
Q 001837 511 GASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEG-KT 589 (1007)
Q Consensus 511 d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~ar~sPeqK~~iV~~Lq~~G-~V 589 (1007)
-+.+.+.|+---.+=++++++|++|.++ +++++.|||...+....|+-+||+.+.+|+...|+.|..+|+.|++.+ +|
T Consensus 18 ~~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~rv~a~a~~e~K~~ii~eLkk~~~k~ 96 (152)
T COG4087 18 AGKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVERVFAGADPEMKAKIIRELKKRYEKV 96 (152)
T ss_pred cceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCceeeeecccCHHHHHHHHHHhcCCCcEE
Confidence 3567788888888899999999999999 999999999999999999999999999999999999999999999987 99
Q ss_pred EEEcCCccCHHHHhhCCeeEEe-CC-CCcHHHHhhcCEEEecCCcchHHHHH
Q 001837 590 AMIGDGINDAPALATADIGISM-GI-SGSALATETGQVILMSNDIRKVPEAI 639 (1007)
Q Consensus 590 amVGDG~NDa~ALk~ADVGIAm-g~-~gs~~A~~aADiVLl~~~l~~I~~lI 639 (1007)
+|||||.||.+||++||+||.. +. ...+-+.++||+++ .++..+.++.
T Consensus 97 vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvi--k~i~e~ldl~ 146 (152)
T COG4087 97 VMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVL--KEIAEILDLL 146 (152)
T ss_pred EEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhh--hhHHHHHHHh
Confidence 9999999999999999999874 32 22345678999998 5555555543
No 37
>PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures. These proteins provide an important focus for research, some being involved in bacterial resistance to toxic metals, such as lead and cadmium, while others are involved in inherited human syndromes, such as Wilson's and Menke's diseases []. A conserved domain has been found in a number of these heavy metal transport or detoxification proteins []. The domain, which has been termed Heavy-Metal-Associated (HMA), contains two conserved cysteines that are probably involved in metal binding. Structure solution of the fourth HMA domain of the Menke's copper transporting ATPase shows a well-defined structure comprising a four-stranded antiparallel beta-sheet and two alpha helices packed in an alpha-beta sandwich fold []. This fold is common to other domains and is classified as "ferredoxin-like".; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2VOY_A 1P6T_A 1KQK_A 2RML_A 1JWW_A 3K7R_F 1FES_A 1CC8_A 1FD8_A 2GGP_A ....
Probab=99.04 E-value=8.1e-10 Score=94.25 Aligned_cols=62 Identities=34% Similarity=0.484 Sum_probs=59.5
Q ss_pred EEEecCCCCchHHHHHHHHHhCCCCeeEEEEecCCCeEEEEEcCCcccHHHHHHHhhhcccc
Q 001837 13 YFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARFE 74 (1007)
Q Consensus 13 ~l~V~Gm~C~~Ca~~IE~~L~~l~GV~~v~Vn~~t~tv~V~~D~~~~s~~~I~~aL~~aGy~ 74 (1007)
+|+|+||+|++|+++|+++|.+++||.++.+|+.++++.|.|++..+++++|.++|+++||+
T Consensus 1 t~~v~~m~C~~C~~~v~~~l~~~~GV~~v~vd~~~~~v~v~~~~~~~~~~~i~~~i~~~Gy~ 62 (62)
T PF00403_consen 1 TFKVPGMTCEGCAKKVEKALSKLPGVKSVKVDLETKTVTVTYDPDKTSIEKIIEAIEKAGYE 62 (62)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEESTTTSCHHHHHHHHHHTTSE
T ss_pred CEEECCcccHHHHHHHHHHHhcCCCCcEEEEECCCCEEEEEEecCCCCHHHHHHHHHHhCcC
Confidence 47899999999999999999999999999999999999999999888899999999999985
No 38
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.02 E-value=1.2e-09 Score=115.89 Aligned_cols=115 Identities=18% Similarity=0.148 Sum_probs=95.9
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEEe--------c-------cCHhHHHHHHHHHhhCC
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHS--------E-------LLPEDKAKIINQFKQEG 587 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~a--------r-------~sPeqK~~iV~~Lq~~G 587 (1007)
+++|++.+.|+.+++.| +++++||-....+..+++++|++ .+|+ + ..|+.|..+++.+++.|
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~--~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~~~~ 144 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFP--TLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLY 144 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCc--hhhceeeEEecCCeeECeeecCcchHHHHHHHHHhhC
Confidence 57999999999999975 99999999999999999999998 5554 1 35789999999998888
Q ss_pred -eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcCEEEecCCcchHHHHHHHH
Q 001837 588 -KTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIRLA 642 (1007)
Q Consensus 588 -~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aADiVLl~~~l~~I~~lI~~g 642 (1007)
.+.|+|||.||.+|++.|++||++. +.+..++.||=.-.-.+.+.+..++.++
T Consensus 145 ~~~v~vGDs~nDl~ml~~Ag~~ia~~--ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 145 YRVIAAGDSYNDTTMLSEAHAGILFH--APENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred CCEEEEeCCHHHHHHHHhCCCCEEec--CCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 8999999999999999999999994 5555555554433335677788777765
No 39
>COG2608 CopZ Copper chaperone [Inorganic ion transport and metabolism]
Probab=98.91 E-value=4.6e-09 Score=92.39 Aligned_cols=69 Identities=25% Similarity=0.400 Sum_probs=64.3
Q ss_pred eeEEEEEecCCCCchHHHHHHHHHhCCCCeeEEEEecCCCeEEEEEcCCcccHHHHHHHhhhccccccc
Q 001837 9 YQKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARFEANV 77 (1007)
Q Consensus 9 ~~~~~l~V~Gm~C~~Ca~~IE~~L~~l~GV~~v~Vn~~t~tv~V~~D~~~~s~~~I~~aL~~aGy~as~ 77 (1007)
+++..|.|+||+|.+|+..|+++|+.++||.++.+++..+++.|.||+...+.++|.++++++||.+..
T Consensus 1 ~~~~~l~v~~MtC~~C~~~V~~al~~v~gv~~v~v~l~~~~~~V~~d~~~~~~~~i~~ai~~aGy~~~~ 69 (71)
T COG2608 1 MMKTTLKVEGMTCGHCVKTVEKALEEVDGVASVDVDLEKGTATVTFDSNKVDIEAIIEAIEDAGYKVEE 69 (71)
T ss_pred CceEEEEECCcCcHHHHHHHHHHHhcCCCeeEEEEEcccCeEEEEEcCCcCCHHHHHHHHHHcCCCeee
Confidence 356789999999999999999999999999999999999999999999778999999999999997643
No 40
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.90 E-value=6.8e-09 Score=117.34 Aligned_cols=114 Identities=26% Similarity=0.350 Sum_probs=98.7
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEEec-----------------cCHhHHHHHHHHHhh
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSE-----------------LLPEDKAKIINQFKQ 585 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~ar-----------------~sPeqK~~iV~~Lq~ 585 (1007)
++.|++.+.|+.|++.|+++.++||.....+..+.+++|++ .+++. +..+.|.++++.+.+
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld--~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la~ 258 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLD--AAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLAQ 258 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCC--eEEEeEEEEECCEEEeEecCccCCcccHHHHHHHHHH
Confidence 57899999999999999999999999988899999999997 44431 234689999988876
Q ss_pred C-C----eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcCEEEecCCcchHHHHHH
Q 001837 586 E-G----KTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIR 640 (1007)
Q Consensus 586 ~-G----~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aADiVLl~~~l~~I~~lI~ 640 (1007)
+ | .+.++|||.||.+|++.|++||+| ++.+..++.||.++...++..+..++.
T Consensus 259 ~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~--nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 259 EYEIPLAQTVAIGDGANDLPMIKAAGLGIAY--HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred HcCCChhhEEEEECCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 5 5 599999999999999999999999 677888999999998888888877664
No 41
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.87 E-value=7.4e-09 Score=110.43 Aligned_cols=112 Identities=22% Similarity=0.374 Sum_probs=95.0
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEEec-----------------cCHhHHHHHHHHHhh
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSE-----------------LLPEDKAKIINQFKQ 585 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~ar-----------------~sPeqK~~iV~~Lq~ 585 (1007)
+++|++.+.|+.|++.|+++.++|+.....+..+.+.+|+. .+|+. ..+..|..+++.+.+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~--~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 162 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLD--AAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLILLR 162 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCC--ceEeeEEEEECCEEEEEecCcccCCcccHHHHHHHHH
Confidence 58999999999999999999999999999999999999997 55541 123347888776654
Q ss_pred C-C----eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcCEEEecCCcchHHHH
Q 001837 586 E-G----KTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEA 638 (1007)
Q Consensus 586 ~-G----~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aADiVLl~~~l~~I~~l 638 (1007)
+ | .+.||||+.+|.+|+++|+++|+++ +.+..++.||.+|.+++|..+..+
T Consensus 163 ~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~--~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 163 KEGISPENTVAVGDGANDLSMIKAAGLGIAFN--AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred HcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC--CCHHHHHhchhccCCCCHHHHHhh
Confidence 4 4 4999999999999999999999994 677888999999999998887654
No 42
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.80 E-value=6.2e-08 Score=98.23 Aligned_cols=110 Identities=15% Similarity=0.247 Sum_probs=88.0
Q ss_pred CCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEEeccCHhHHHHHHHHHhh-CC--
Q 001837 511 GASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQ-EG-- 587 (1007)
Q Consensus 511 d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~ar~sPeqK~~iV~~Lq~-~G-- 587 (1007)
+++.++.+.+.|.. +|++|++.|+++.|+|++....+..+.+++|+. .+|... ..|...++.+.+ .|
T Consensus 22 ~~~~~~~~~~~~~~------~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~--~~~~~~--~~k~~~~~~~~~~~~~~ 91 (154)
T TIGR01670 22 NGEEIKAFNVRDGY------GIRCALKSGIEVAIITGRKAKLVEDRCKTLGIT--HLYQGQ--SNKLIAFSDILEKLALA 91 (154)
T ss_pred CCcEEEEEechhHH------HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCC--EEEecc--cchHHHHHHHHHHcCCC
Confidence 34455555444432 899999999999999999999999999999998 767654 345666665543 33
Q ss_pred --eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcCEEEecCC
Q 001837 588 --KTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSND 631 (1007)
Q Consensus 588 --~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aADiVLl~~~ 631 (1007)
.++|+||+.||.+|++.|++++++. .+.+..+..+|+++.++.
T Consensus 92 ~~~~~~vGDs~~D~~~~~~ag~~~~v~-~~~~~~~~~a~~i~~~~~ 136 (154)
T TIGR01670 92 PENVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAG 136 (154)
T ss_pred HHHEEEECCCHHHHHHHHHCCCeEecC-CcCHHHHHhCCEEecCCC
Confidence 6999999999999999999999997 667788899999997554
No 43
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.66 E-value=7.6e-08 Score=102.69 Aligned_cols=104 Identities=27% Similarity=0.335 Sum_probs=84.5
Q ss_pred CcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc--------------eEEecc-CHhHHHHHHHHHhhC
Q 001837 522 DACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN--------------VVHSEL-LPEDKAKIINQFKQE 586 (1007)
Q Consensus 522 D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~--------------~V~ar~-sPeqK~~iV~~Lq~~ 586 (1007)
.+++|++.+.++.++++|.+|+++||-...-+..+|+++|++.. .+.... ..+.|...++.+.+.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~~ 155 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAAE 155 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHHH
Confidence 67899999999999999999999999999999999999999843 222223 347899999777764
Q ss_pred -C----eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcCEEE
Q 001837 587 -G----KTAMIGDGINDAPALATADIGISMGISGSALATETGQVIL 627 (1007)
Q Consensus 587 -G----~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aADiVL 627 (1007)
| .+.++|||.||.|||+.|+.+|++. ........|+..+
T Consensus 156 ~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n--~~~~l~~~a~~~~ 199 (212)
T COG0560 156 LGIPLEETVAYGDSANDLPMLEAAGLPIAVN--PKPKLRALADVRI 199 (212)
T ss_pred cCCCHHHeEEEcCchhhHHHHHhCCCCeEeC--cCHHHHHHHHHhc
Confidence 5 3999999999999999999999995 3443444454443
No 44
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.64 E-value=2e-07 Score=95.99 Aligned_cols=99 Identities=18% Similarity=0.298 Sum_probs=81.3
Q ss_pred HHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEEeccCH--hHHHHHHHHHhhCC-eEEEEcCCccCHHHHhhCC
Q 001837 530 EAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSELLP--EDKAKIINQFKQEG-KTAMIGDGINDAPALATAD 606 (1007)
Q Consensus 530 eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~ar~sP--eqK~~iV~~Lq~~G-~VamVGDG~NDa~ALk~AD 606 (1007)
..|+.|++.|+++.++|+.+...+..+.+.+|+. .+|....| +.-..+++.++-.. .++|+||+.||.+|++.|+
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~--~~f~~~kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag 118 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIK--RFHEGIKKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVG 118 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCc--EEEecCCCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCC
Confidence 4799999999999999999999999999999998 77776643 33333333333222 6999999999999999999
Q ss_pred eeEEeCCCCcHHHHhhcCEEEecCC
Q 001837 607 IGISMGISGSALATETGQVILMSND 631 (1007)
Q Consensus 607 VGIAmg~~gs~~A~~aADiVLl~~~ 631 (1007)
++++|+ ++.+..+..|++|+..++
T Consensus 119 ~~~am~-nA~~~lk~~A~~I~~~~~ 142 (169)
T TIGR02726 119 LAVAVG-DAVADVKEAAAYVTTARG 142 (169)
T ss_pred CeEECc-CchHHHHHhCCEEcCCCC
Confidence 999998 778888999999886444
No 45
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=98.64 E-value=1.8e-07 Score=99.84 Aligned_cols=130 Identities=18% Similarity=0.201 Sum_probs=102.2
Q ss_pred EEEEEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc-------------------
Q 001837 505 IGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN------------------- 565 (1007)
Q Consensus 505 ~i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~------------------- 565 (1007)
.++.-.|++++. =...+.+.+.++|++|++.|+++++.||-+...+..+++++++...
T Consensus 3 ~v~~DlDGTLl~---~~~~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~ 79 (215)
T TIGR01487 3 LVAIDIDGTLTE---PNRMISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLA 79 (215)
T ss_pred EEEEecCCCcCC---CCcccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEe
Confidence 345556777763 1234889999999999999999999999999999999999997632
Q ss_pred ----------------------------------------------------eE----EeccC--HhHHHHHHHHHhhC-
Q 001837 566 ----------------------------------------------------VV----HSELL--PEDKAKIINQFKQE- 586 (1007)
Q Consensus 566 ----------------------------------------------------~V----~ar~s--PeqK~~iV~~Lq~~- 586 (1007)
.+ +..+. .-.|...++.+.+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~ 159 (215)
T TIGR01487 80 NMEEEWFLDEEKKKRFPRDRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELL 159 (215)
T ss_pred cccchhhHHHhhhhhhhhhhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHh
Confidence 00 11222 23688888877664
Q ss_pred C----eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcCEEEecCCcchHHHH
Q 001837 587 G----KTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEA 638 (1007)
Q Consensus 587 G----~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aADiVLl~~~l~~I~~l 638 (1007)
| .++++||+.||.+|++.|++|++|+ ++.+..++.||+|..+++-..+.++
T Consensus 160 ~i~~~~~i~iGDs~ND~~ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 160 GIKPEEVAAIGDSENDIDLFRVVGFKVAVA-NADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred CCCHHHEEEECCCHHHHHHHHhCCCeEEcC-CccHHHHHhCCEEcCCCCCchhhhh
Confidence 4 4999999999999999999999999 8899999999999876666666544
No 46
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.63 E-value=2.7e-07 Score=96.25 Aligned_cols=109 Identities=18% Similarity=0.283 Sum_probs=86.8
Q ss_pred HHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEEeccCHhHHHHHHHHHhh-CC----eEEEEcCCccCHHHHhh
Q 001837 530 EAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQ-EG----KTAMIGDGINDAPALAT 604 (1007)
Q Consensus 530 eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~ar~sPeqK~~iV~~Lq~-~G----~VamVGDG~NDa~ALk~ 604 (1007)
.+|+.|++.|+++.++||.....+..+++++|+. .+|... +.|...++.+.+ .| .|+||||+.||.+|++.
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~--~~f~g~--~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~ 130 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGIT--HLYQGQ--SNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEK 130 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCc--eeecCC--CcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHH
Confidence 6899999999999999999999999999999998 777643 457666665543 34 59999999999999999
Q ss_pred CCeeEEeCCCCcHHHHhhcCEEEecC----CcchHHHHHHHHH
Q 001837 605 ADIGISMGISGSALATETGQVILMSN----DIRKVPEAIRLAR 643 (1007)
Q Consensus 605 ADVGIAmg~~gs~~A~~aADiVLl~~----~l~~I~~lI~~gR 643 (1007)
|+++++++ ++.+..+..||+++-.+ .+..+.+.+...|
T Consensus 131 aG~~~~v~-~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~~~ 172 (183)
T PRK09484 131 VGLSVAVA-DAHPLLLPRADYVTRIAGGRGAVREVCDLLLLAQ 172 (183)
T ss_pred CCCeEecC-ChhHHHHHhCCEEecCCCCCCHHHHHHHHHHHhc
Confidence 99999987 66778888899998432 2445555554333
No 47
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=98.61 E-value=3.3e-07 Score=101.01 Aligned_cols=132 Identities=20% Similarity=0.231 Sum_probs=100.1
Q ss_pred EEEEEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc---c----------------
Q 001837 505 IGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL---N---------------- 565 (1007)
Q Consensus 505 ~i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~---~---------------- 565 (1007)
.+++-.|++++.- ...+.+.++++|++|++.|+++++.||.....+..+.+++|+.. .
T Consensus 5 li~~DlDGTLl~~---~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~~~~~~ 81 (270)
T PRK10513 5 LIAIDMDGTLLLP---DHTISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQKAADGE 81 (270)
T ss_pred EEEEecCCcCcCC---CCccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEECCCCC
Confidence 4555667777642 34588899999999999999999999999999999999999742 0
Q ss_pred --------------------------------eEEec---------------------------------------cCHh
Q 001837 566 --------------------------------VVHSE---------------------------------------LLPE 574 (1007)
Q Consensus 566 --------------------------------~V~ar---------------------------------------~sPe 574 (1007)
.+|.. ..|+
T Consensus 82 ~i~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 161 (270)
T PRK10513 82 TVAQTALSYDDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFREVEKMDPNLQFPKVMMIDEPE 161 (270)
T ss_pred EEEecCCCHHHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccccchhhccccCCceEEEEeCCHH
Confidence 01100 0011
Q ss_pred ----------------------------------HHHHHHHHHhhC-C----eEEEEcCCccCHHHHhhCCeeEEeCCCC
Q 001837 575 ----------------------------------DKAKIINQFKQE-G----KTAMIGDGINDAPALATADIGISMGISG 615 (1007)
Q Consensus 575 ----------------------------------qK~~iV~~Lq~~-G----~VamVGDG~NDa~ALk~ADVGIAmg~~g 615 (1007)
.|..-++.|.+. | .|+++|||.||.+||+.|++|+||+ ++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-NA 240 (270)
T PRK10513 162 ILDAAIARIPAEVKERYTVLKSAPYFLEILDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMG-NA 240 (270)
T ss_pred HHHHHHHHhHHHhcCcEEEEEecCeeEEEeCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEec-Cc
Confidence 122233333332 4 4999999999999999999999999 89
Q ss_pred cHHHHhhcCEEEecCCcchHHHHHH
Q 001837 616 SALATETGQVILMSNDIRKVPEAIR 640 (1007)
Q Consensus 616 s~~A~~aADiVLl~~~l~~I~~lI~ 640 (1007)
.+..++.||+|..+++=..+..+|+
T Consensus 241 ~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 241 IPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred cHHHHHhcCeeccCCCcchHHHHHH
Confidence 9999999999998888888887775
No 48
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.58 E-value=2.2e-07 Score=97.92 Aligned_cols=112 Identities=23% Similarity=0.284 Sum_probs=89.0
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEEe-------------c--cCHhHHHHHHHHHhhCC
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHS-------------E--LLPEDKAKIINQFKQEG 587 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~a-------------r--~sPeqK~~iV~~Lq~~G 587 (1007)
++.|++.++++.|++. +++.++|+.....+..+.+++|+. .+|+ . ..|+.|..+++.++..+
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~--~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~~~ 144 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWP--TLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKSLG 144 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCc--hhhcceEEECCCCeEECccccccchHHHHHHHHHHhC
Confidence 3579999999999999 999999999999999999999986 3322 1 24788999999988777
Q ss_pred -eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcCE-EEecCCcchHHHHHH
Q 001837 588 -KTAMIGDGINDAPALATADIGISMGISGSALATETGQV-ILMSNDIRKVPEAIR 640 (1007)
Q Consensus 588 -~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aADi-VLl~~~l~~I~~lI~ 640 (1007)
.++|||||.||.+|.++|++|+.++ .........++. ++ +++..|...+.
T Consensus 145 ~~~v~iGDs~~D~~~~~aa~~~v~~~-~~~~~~~~~~~~~~~--~~~~el~~~l~ 196 (205)
T PRK13582 145 YRVIAAGDSYNDTTMLGEADAGILFR-PPANVIAEFPQFPAV--HTYDELLAAID 196 (205)
T ss_pred CeEEEEeCCHHHHHHHHhCCCCEEEC-CCHHHHHhCCccccc--CCHHHHHHHHH
Confidence 8999999999999999999999986 333333445555 43 56666665543
No 49
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=98.58 E-value=3.4e-07 Score=98.34 Aligned_cols=131 Identities=21% Similarity=0.236 Sum_probs=101.7
Q ss_pred EEEEEECCEEEEEEEecCc-ccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc------------------
Q 001837 505 IGYIFSGASPVGIFCLSDA-CRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN------------------ 565 (1007)
Q Consensus 505 ~i~v~~d~~~lGli~l~D~-lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~------------------ 565 (1007)
.++.-.|++++- .|. +.+.+.++|++|++.|+++++.||.....+..+++++|+...
T Consensus 5 li~~DlDGTLl~----~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~ 80 (230)
T PRK01158 5 AIAIDIDGTITD----KDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRI 80 (230)
T ss_pred EEEEecCCCcCC----CCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEE
Confidence 445556777762 333 788999999999999999999999999999999999987532
Q ss_pred -----------------------eE------------------------------------------EeccCHh--HHHH
Q 001837 566 -----------------------VV------------------------------------------HSELLPE--DKAK 578 (1007)
Q Consensus 566 -----------------------~V------------------------------------------~ar~sPe--qK~~ 578 (1007)
.. +..+.|. .|..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~ 160 (230)
T PRK01158 81 FLGDIEECEKAYSELKKRFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGT 160 (230)
T ss_pred EEcchHHHHHHHHHHHHhccccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHH
Confidence 00 0011121 1555
Q ss_pred HHHHHhhC-C----eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcCEEEecCCcchHHHHHH
Q 001837 579 IINQFKQE-G----KTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIR 640 (1007)
Q Consensus 579 iV~~Lq~~-G----~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aADiVLl~~~l~~I~~lI~ 640 (1007)
-++.|.+. | .++++||+.||.+|++.|++|++|+ ++.+..++.||+|..+++-..+.++++
T Consensus 161 al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~-Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 161 GLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFGVAVA-NADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred HHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCceEEec-CccHHHHHhcceEecCCCcChHHHHHH
Confidence 56655543 4 4999999999999999999999999 889999999999998888888887775
No 50
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=98.51 E-value=5.1e-07 Score=99.86 Aligned_cols=132 Identities=15% Similarity=0.154 Sum_probs=99.5
Q ss_pred EEEEEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc-------------------
Q 001837 505 IGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN------------------- 565 (1007)
Q Consensus 505 ~i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~------------------- 565 (1007)
.+++-.|++++. -...+.+.++++|++|++.|+++++.||-....+..+.+++|+...
T Consensus 4 li~~DlDGTLl~---~~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~ 80 (272)
T PRK15126 4 LAAFDMDGTLLM---PDHHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHR 80 (272)
T ss_pred EEEEeCCCcCcC---CCCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEe
Confidence 345556777763 1335889999999999999999999999999999999999987532
Q ss_pred ----------------------------eEE-------------------------------------------------
Q 001837 566 ----------------------------VVH------------------------------------------------- 568 (1007)
Q Consensus 566 ----------------------------~V~------------------------------------------------- 568 (1007)
.++
T Consensus 81 ~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~ 160 (272)
T PRK15126 81 QDLPADVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQI 160 (272)
T ss_pred ecCCHHHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHH
Confidence 000
Q ss_pred -------------------eccCHh--HHHHHHHHHhhC-C----eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhh
Q 001837 569 -------------------SELLPE--DKAKIINQFKQE-G----KTAMIGDGINDAPALATADIGISMGISGSALATET 622 (1007)
Q Consensus 569 -------------------ar~sPe--qK~~iV~~Lq~~-G----~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~a 622 (1007)
..++|. .|..-|+.|.+. | .|+++|||.||.+||+.|+.||||+ ++.+.+++.
T Consensus 161 ~l~~~~~~~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-Na~~~vK~~ 239 (272)
T PRK15126 161 QLNEALGERAHLCFSATDCLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMG-NAMPQLRAE 239 (272)
T ss_pred HHHHHhcCCEEEEEcCCcEEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceecc-CChHHHHHh
Confidence 001111 255555555443 4 4999999999999999999999999 899999999
Q ss_pred cCE--EEecCCcchHHHHHH
Q 001837 623 GQV--ILMSNDIRKVPEAIR 640 (1007)
Q Consensus 623 ADi--VLl~~~l~~I~~lI~ 640 (1007)
||. |..+++-..+..+|+
T Consensus 240 A~~~~v~~~n~edGva~~l~ 259 (272)
T PRK15126 240 LPHLPVIGHCRNQAVSHYLT 259 (272)
T ss_pred CCCCeecCCCcchHHHHHHH
Confidence 985 665677777777764
No 51
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=98.50 E-value=6.1e-07 Score=98.68 Aligned_cols=132 Identities=23% Similarity=0.318 Sum_probs=104.2
Q ss_pred EEEEEECCEEEEEEEecCc-ccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc------------------
Q 001837 505 IGYIFSGASPVGIFCLSDA-CRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN------------------ 565 (1007)
Q Consensus 505 ~i~v~~d~~~lGli~l~D~-lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~------------------ 565 (1007)
.+++..|++++ -.+. +.+.++++|+++++.|+++++.||.....+..+.+++++...
T Consensus 5 li~~DlDGTLl----~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~ 80 (264)
T COG0561 5 LLAFDLDGTLL----DSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQ 80 (264)
T ss_pred EEEEcCCCCcc----CCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEee
Confidence 33444455543 3333 899999999999999999999999999999999999998742
Q ss_pred -----------------------eEE------------------------------------------------------
Q 001837 566 -----------------------VVH------------------------------------------------------ 568 (1007)
Q Consensus 566 -----------------------~V~------------------------------------------------------ 568 (1007)
.++
T Consensus 81 ~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (264)
T COG0561 81 KPLSREDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVE 160 (264)
T ss_pred ecCCHHHHHHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHH
Confidence 000
Q ss_pred --------------------eccCH--hHHHHHHHHHhhC-C----eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHh
Q 001837 569 --------------------SELLP--EDKAKIINQFKQE-G----KTAMIGDGINDAPALATADIGISMGISGSALATE 621 (1007)
Q Consensus 569 --------------------ar~sP--eqK~~iV~~Lq~~-G----~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~ 621 (1007)
-.+.| ..|...++.|.+. | .|+++||+.||.+||+.|+.||||| ++.+.+++
T Consensus 161 ~l~~~~~~~~~~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~-Na~~~~k~ 239 (264)
T COG0561 161 ALRKRFPDLGLTVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMG-NADEELKE 239 (264)
T ss_pred HHhhhccccceEEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeecc-CCCHHHHh
Confidence 00111 2477777777764 5 3999999999999999999999999 77999999
Q ss_pred hcCEEEecCCcchHHHHHHH
Q 001837 622 TGQVILMSNDIRKVPEAIRL 641 (1007)
Q Consensus 622 aADiVLl~~~l~~I~~lI~~ 641 (1007)
.||++..+++-..|..+++.
T Consensus 240 ~A~~vt~~n~~~Gv~~~l~~ 259 (264)
T COG0561 240 LADYVTTSNDEDGVAEALEK 259 (264)
T ss_pred hCCcccCCccchHHHHHHHH
Confidence 99988888888888888764
No 52
>PRK10976 putative hydrolase; Provisional
Probab=98.48 E-value=8.8e-07 Score=97.49 Aligned_cols=132 Identities=21% Similarity=0.219 Sum_probs=97.5
Q ss_pred EEEEEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc-------------------
Q 001837 505 IGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN------------------- 565 (1007)
Q Consensus 505 ~i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~------------------- 565 (1007)
.+++-.|++++-- ...+.+.++++|++|+++|+++++.||.....+..+.+++|+...
T Consensus 4 li~~DlDGTLl~~---~~~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~ 80 (266)
T PRK10976 4 VVASDLDGTLLSP---DHTLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGNLIFS 80 (266)
T ss_pred EEEEeCCCCCcCC---CCcCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCCEehh
Confidence 4455567777631 234888999999999999999999999999999999999987532
Q ss_pred -----------------------------eEEe-c-----------------------------------c-CHh-----
Q 001837 566 -----------------------------VVHS-E-----------------------------------L-LPE----- 574 (1007)
Q Consensus 566 -----------------------------~V~a-r-----------------------------------~-sPe----- 574 (1007)
.+|. + . .++
T Consensus 81 ~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~ 160 (266)
T PRK10976 81 HNLDRDIASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFTCDSHEKLLPL 160 (266)
T ss_pred hcCCHHHHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEEcCCHHHHHHH
Confidence 0000 0 0 011
Q ss_pred -----------------------------HHHHHHHHHhhC-C----eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHH
Q 001837 575 -----------------------------DKAKIINQFKQE-G----KTAMIGDGINDAPALATADIGISMGISGSALAT 620 (1007)
Q Consensus 575 -----------------------------qK~~iV~~Lq~~-G----~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~ 620 (1007)
.|..-++.|.+. | .|+++||+.||.+||+.|+.||||+ ++.+..+
T Consensus 161 ~~~l~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~-NA~~~vK 239 (266)
T PRK10976 161 EQAINARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMG-NAHQRLK 239 (266)
T ss_pred HHHHHHHhCCcEEEEEeCCceEEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeec-CCcHHHH
Confidence 133344444333 4 4999999999999999999999999 8899999
Q ss_pred hhcC--EEEecCCcchHHHHHH
Q 001837 621 ETGQ--VILMSNDIRKVPEAIR 640 (1007)
Q Consensus 621 ~aAD--iVLl~~~l~~I~~lI~ 640 (1007)
+.|| .|..+++=..+..+|+
T Consensus 240 ~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 240 DLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred HhCCCCeecccCchHHHHHHHH
Confidence 9987 6766667667777664
No 53
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.45 E-value=6.9e-07 Score=93.53 Aligned_cols=99 Identities=30% Similarity=0.420 Sum_probs=79.7
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEEec-----------------cCHhHHHHHHHHHhh
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSE-----------------LLPEDKAKIINQFKQ 585 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~ar-----------------~sPeqK~~iV~~Lq~ 585 (1007)
+++|++.+.|+.|++.|+++.++|+-....+..+++.+|+. .+|+. ..|..|..+++.+.+
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~--~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~~ 157 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPD--YVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLKR 157 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCC--eEEEEEEEEcCCCeEecceeeEEccccHHHHHHHHHH
Confidence 57999999999999999999999999999999999999987 44431 234567777777654
Q ss_pred C-C----eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcC
Q 001837 586 E-G----KTAMIGDGINDAPALATADIGISMGISGSALATETGQ 624 (1007)
Q Consensus 586 ~-G----~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aAD 624 (1007)
. | .++|+||+.+|.+|+++|+++++++ .+......++|
T Consensus 158 ~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~-~~~~~~~~a~~ 200 (201)
T TIGR01491 158 ELNPSLTETVAVGDSKNDLPMFEVADISISLG-DEGHADYLAKD 200 (201)
T ss_pred HhCCCHHHEEEEcCCHhHHHHHHhcCCeEEEC-CCccchhhccc
Confidence 3 4 4999999999999999999999997 44444444444
No 54
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.41 E-value=3.3e-06 Score=93.02 Aligned_cols=52 Identities=23% Similarity=0.441 Sum_probs=46.9
Q ss_pred eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcCEEEecCCcchHHHHHH
Q 001837 588 KTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIR 640 (1007)
Q Consensus 588 ~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aADiVLl~~~l~~I~~lI~ 640 (1007)
.|+++||+.||.+|++.|++|++|| ++.+..++.||+|+.+++=..+.++|+
T Consensus 217 e~i~~GD~~NDi~m~~~ag~~vamg-na~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 217 NVVAFGDNFNDISMLEAAGLGVAMG-NADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred HeEEeCCChhhHHHHHhcCceEEec-CchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 4999999999999999999999999 677777999999998888888888775
No 55
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.41 E-value=3.2e-07 Score=93.49 Aligned_cols=90 Identities=27% Similarity=0.410 Sum_probs=78.8
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEEeccC-------------------HhHHHHHHHHH
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSELL-------------------PEDKAKIINQF 583 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~ar~s-------------------PeqK~~iV~~L 583 (1007)
.+-|++++.+..|++.|.+|.++||--..-+..||.+|||+...+||+.. -..|..+|+.+
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i~~l 167 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVIALL 167 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHHHHH
Confidence 35789999999999999999999999999999999999999766777642 35799999999
Q ss_pred hhC-C--eEEEEcCCccCHHHHhhCCeeEEeC
Q 001837 584 KQE-G--KTAMIGDGINDAPALATADIGISMG 612 (1007)
Q Consensus 584 q~~-G--~VamVGDG~NDa~ALk~ADVGIAmg 612 (1007)
++. . .++|||||.||.+|+..||.=|+.|
T Consensus 168 rk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 168 RKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred HhCCChheeEEecCCccccccCCchhhhhccC
Confidence 985 2 6999999999999999988777664
No 56
>PLN02954 phosphoserine phosphatase
Probab=98.40 E-value=1.9e-06 Score=92.23 Aligned_cols=114 Identities=22% Similarity=0.314 Sum_probs=87.1
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEEec-------------------cCHhHHHHHHHHH
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSE-------------------LLPEDKAKIINQF 583 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~ar-------------------~sPeqK~~iV~~L 583 (1007)
.++|++.++++.|++.|+++.++||.....+..+.+.+|+....+|+. ..+..|...++.+
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~~~ 163 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQHI 163 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHHHH
Confidence 378999999999999999999999999999999999999974334431 0123588888877
Q ss_pred hhC-C--eEEEEcCCccCHHHHhh--CCeeEEeCCCC-cHHHHhhcCEEEecCCcchHHHH
Q 001837 584 KQE-G--KTAMIGDGINDAPALAT--ADIGISMGISG-SALATETGQVILMSNDIRKVPEA 638 (1007)
Q Consensus 584 q~~-G--~VamVGDG~NDa~ALk~--ADVGIAmg~~g-s~~A~~aADiVLl~~~l~~I~~l 638 (1007)
.+. | .++|+||+.||..|.++ ++++++.|... .+.....+|+++ +++..+..+
T Consensus 164 ~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~~~el~~~ 222 (224)
T PLN02954 164 KKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFV--TDFQDLIEV 222 (224)
T ss_pred HHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEE--CCHHHHHHh
Confidence 765 4 69999999999999777 57777765221 233345689988 567666554
No 57
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.39 E-value=1.5e-06 Score=92.85 Aligned_cols=116 Identities=22% Similarity=0.324 Sum_probs=93.3
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc-------------------------------------
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN------------------------------------- 565 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~------------------------------------- 565 (1007)
.+.+.+.++|++|++.|+++++.||.+...+..+.+++|+...
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 4778899999999999999999999999999999999985421
Q ss_pred ------------------------------------eE-------EeccCH--hHHHHHHHHHhhC-C----eEEEEcCC
Q 001837 566 ------------------------------------VV-------HSELLP--EDKAKIINQFKQE-G----KTAMIGDG 595 (1007)
Q Consensus 566 ------------------------------------~V-------~ar~sP--eqK~~iV~~Lq~~-G----~VamVGDG 595 (1007)
.+ +..+.| -.|...|+.+.+. | .|+++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 00 011122 3577777777654 4 59999999
Q ss_pred ccCHHHHhhCCeeEEeCCCCcHHHHhhcCEEEecCCcch----HHHHH
Q 001837 596 INDAPALATADIGISMGISGSALATETGQVILMSNDIRK----VPEAI 639 (1007)
Q Consensus 596 ~NDa~ALk~ADVGIAmg~~gs~~A~~aADiVLl~~~l~~----I~~lI 639 (1007)
.||.+|++.|++|++|+ ++.+..++.||.|..+++-.. +..++
T Consensus 175 ~NDi~m~~~ag~~vam~-Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l 221 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVA-NAQPELKEWADYVTESPYGEGGAEAIGEIL 221 (225)
T ss_pred HhhHHHHHhcCceEEcC-ChhHHHHHhcCeecCCCCCCcHHHHHHHHH
Confidence 99999999999999999 788899999999987777777 55544
No 58
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=98.35 E-value=2.5e-06 Score=91.57 Aligned_cols=117 Identities=25% Similarity=0.300 Sum_probs=95.3
Q ss_pred CcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc------------------------------------
Q 001837 522 DACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN------------------------------------ 565 (1007)
Q Consensus 522 D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~------------------------------------ 565 (1007)
..+.+.++++|++|+++|+++++.||.....+..+.+++++...
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~~ 93 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLKE 93 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhhh
Confidence 45778999999999999999999999999999999999997621
Q ss_pred -------------------------------------------------e-------------------------E----
Q 001837 566 -------------------------------------------------V-------------------------V---- 567 (1007)
Q Consensus 566 -------------------------------------------------~-------------------------V---- 567 (1007)
. .
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 173 (254)
T PF08282_consen 94 HNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVRS 173 (254)
T ss_dssp TTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEEE
T ss_pred cccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEEe
Confidence 0 1
Q ss_pred ---EeccCH--hHHHHHHHHHhhC-C----eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcCEEEecCCcchHHH
Q 001837 568 ---HSELLP--EDKAKIINQFKQE-G----KTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPE 637 (1007)
Q Consensus 568 ---~ar~sP--eqK~~iV~~Lq~~-G----~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aADiVLl~~~l~~I~~ 637 (1007)
+-.++| -.|..-|+.|.+. | .++++||+.||.+||+.|+.|++|+ ++++..+..||.++...+=..|..
T Consensus 174 ~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~-na~~~~k~~a~~i~~~~~~~gv~~ 252 (254)
T PF08282_consen 174 SPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMG-NATPELKKAADYITPSNNDDGVAK 252 (254)
T ss_dssp ETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEET-TS-HHHHHHSSEEESSGTCTHHHH
T ss_pred cccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEc-CCCHHHHHhCCEEecCCCCChHHH
Confidence 112223 4588888888764 3 5999999999999999999999999 888999999999987766566665
Q ss_pred HH
Q 001837 638 AI 639 (1007)
Q Consensus 638 lI 639 (1007)
+|
T Consensus 253 ~i 254 (254)
T PF08282_consen 253 AI 254 (254)
T ss_dssp HH
T ss_pred hC
Confidence 43
No 59
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.29 E-value=3.9e-06 Score=83.20 Aligned_cols=114 Identities=18% Similarity=0.330 Sum_probs=94.4
Q ss_pred HHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEEeccCHhHHHHHHHHHhhC-C----eEEEEcCCccCHHHHhh
Q 001837 530 EAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQE-G----KTAMIGDGINDAPALAT 604 (1007)
Q Consensus 530 eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~ar~sPeqK~~iV~~Lq~~-G----~VamVGDG~NDa~ALk~ 604 (1007)
-.|+.|.++||++.++||.+...++.=|+++||. .+|=.. ++|....+.|.++ + .|+++||..||.|+|++
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~--~~~qG~--~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~ 117 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIK--HLYQGI--SDKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEK 117 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCc--eeeech--HhHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHH
Confidence 4799999999999999999999999999999998 777654 5899988887765 4 59999999999999999
Q ss_pred CCeeEEeCCCCcHHHHhhcCEEEecCC----cchHHHHHHHHHHHHHH
Q 001837 605 ADIGISMGISGSALATETGQVILMSND----IRKVPEAIRLARKAHWK 648 (1007)
Q Consensus 605 ADVGIAmg~~gs~~A~~aADiVLl~~~----l~~I~~lI~~gR~~~~~ 648 (1007)
..+++++. .+....++.||+|+.... ++.+.++|..++..+..
T Consensus 118 vGls~a~~-dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d~ 164 (170)
T COG1778 118 VGLSVAVA-DAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLDE 164 (170)
T ss_pred cCCccccc-ccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHHH
Confidence 99999986 777888899999986543 55556666666555443
No 60
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.28 E-value=4.2e-06 Score=91.62 Aligned_cols=127 Identities=21% Similarity=0.308 Sum_probs=95.2
Q ss_pred EEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc----------------------
Q 001837 508 IFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN---------------------- 565 (1007)
Q Consensus 508 v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~---------------------- 565 (1007)
.-.|++++-- ...+.+++.++|++|++.|+++++.||.+...+..+.+++|+...
T Consensus 4 ~DlDGTLl~~---~~~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~~~~i 80 (256)
T TIGR00099 4 IDLDGTLLND---DHTISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILYKKPL 80 (256)
T ss_pred EeCCCCCCCC---CCccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEeecCC
Confidence 3456666531 234788999999999999999999999999999999999987522
Q ss_pred -------------------------eEE----------------------------------------------------
Q 001837 566 -------------------------VVH---------------------------------------------------- 568 (1007)
Q Consensus 566 -------------------------~V~---------------------------------------------------- 568 (1007)
.+|
T Consensus 81 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (256)
T TIGR00099 81 DLDLVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLDPEDLDLLIEA 160 (256)
T ss_pred CHHHHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECCHHHHHHHHHH
Confidence 000
Q ss_pred -------------------eccCHh--HHHHHHHHHhhC-C----eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhh
Q 001837 569 -------------------SELLPE--DKAKIINQFKQE-G----KTAMIGDGINDAPALATADIGISMGISGSALATET 622 (1007)
Q Consensus 569 -------------------ar~sPe--qK~~iV~~Lq~~-G----~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~a 622 (1007)
-.+.|. .|..-|+.+.+. | .++++||+.||.+|++.|++|++|+ ++.+..++.
T Consensus 161 ~~~~~~~~~~~~~~s~~~~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~-na~~~~k~~ 239 (256)
T TIGR00099 161 LNKLELEENVSVVSSGPYSIEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG-NADEELKAL 239 (256)
T ss_pred hhhhhhcCCEEEEEecCceEEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEec-CchHHHHHh
Confidence 001111 255555555443 3 4999999999999999999999998 778888999
Q ss_pred cCEEEecCCcchHHHH
Q 001837 623 GQVILMSNDIRKVPEA 638 (1007)
Q Consensus 623 ADiVLl~~~l~~I~~l 638 (1007)
||+++.+++-..|..+
T Consensus 240 a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 240 ADYVTDSNNEDGVALA 255 (256)
T ss_pred CCEEecCCCCcchhhh
Confidence 9999987776666554
No 61
>PLN02887 hydrolase family protein
Probab=98.25 E-value=6.5e-06 Score=99.77 Aligned_cols=52 Identities=35% Similarity=0.500 Sum_probs=47.9
Q ss_pred eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcCEEEecCCcchHHHHHH
Q 001837 588 KTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSNDIRKVPEAIR 640 (1007)
Q Consensus 588 ~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aADiVLl~~~l~~I~~lI~ 640 (1007)
.|+++|||.||.+||+.|+.||||| ++.+..++.||+|..+++=..|..+|+
T Consensus 525 eviAFGDs~NDIeMLe~AG~gVAMg-NA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 525 EIMAIGDGENDIEMLQLASLGVALS-NGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred HEEEEecchhhHHHHHHCCCEEEeC-CCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 4999999999999999999999999 899999999999998888888887775
No 62
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.18 E-value=5.7e-06 Score=88.37 Aligned_cols=90 Identities=19% Similarity=0.257 Sum_probs=74.4
Q ss_pred CcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEEec-c----------CH------------hHHHH
Q 001837 522 DACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSE-L----------LP------------EDKAK 578 (1007)
Q Consensus 522 D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~ar-~----------sP------------eqK~~ 578 (1007)
-+++|++.+.++.|++.|+++.++||.....+..+.+.++.. ..+++. + .| ..|..
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~-~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~ 147 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEK-DRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPS 147 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCc-ccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHH
Confidence 468999999999999999999999999999999999888543 234431 1 13 24899
Q ss_pred HHHHHhhCC-eEEEEcCCccCHHHHhhCCeeEEeC
Q 001837 579 IINQFKQEG-KTAMIGDGINDAPALATADIGISMG 612 (1007)
Q Consensus 579 iV~~Lq~~G-~VamVGDG~NDa~ALk~ADVGIAmg 612 (1007)
+++.++... .+.|||||.||..|++.||+.++-+
T Consensus 148 ~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~ 182 (214)
T TIGR03333 148 LIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARD 182 (214)
T ss_pred HHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehH
Confidence 999998765 8999999999999999999988753
No 63
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.18 E-value=3.3e-06 Score=87.60 Aligned_cols=78 Identities=27% Similarity=0.406 Sum_probs=65.1
Q ss_pred ccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEE-------------eccCHh-H--HHHHHHHH------
Q 001837 526 TGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVH-------------SELLPE-D--KAKIINQF------ 583 (1007)
Q Consensus 526 ~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~-------------ar~sPe-q--K~~iV~~L------ 583 (1007)
+++.+.|+.++++|++++|+||+....+..+++.+|++...++ ++.+|. + |..+++.+
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~ 171 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNELFDNGGGIFTGRITGSNCGGKAEALKELYIRDEE 171 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEEECTTCCEEEEEEEEEEESHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEeeeecccceeeeeECCCCCCcHHHHHHHHHHHhhc
Confidence 6777999999999999999999999999999999999853222 333333 3 99999999
Q ss_pred hhCC-eEEEEcCCccCHHHHh
Q 001837 584 KQEG-KTAMIGDGINDAPALA 603 (1007)
Q Consensus 584 q~~G-~VamVGDG~NDa~ALk 603 (1007)
+... .+.++|||.||.||||
T Consensus 172 ~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 172 DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp THTCCEEEEEESSGGGHHHHH
T ss_pred CCCCCeEEEEECCHHHHHHhC
Confidence 2233 8999999999999986
No 64
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=98.09 E-value=1.8e-05 Score=85.01 Aligned_cols=118 Identities=21% Similarity=0.322 Sum_probs=92.4
Q ss_pred cCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc--eEEe-cc------CHhHHHHHHHHHhhCC-eEE
Q 001837 521 SDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN--VVHS-EL------LPEDKAKIINQFKQEG-KTA 590 (1007)
Q Consensus 521 ~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~--~V~a-r~------sPeqK~~iV~~Lq~~G-~Va 590 (1007)
...+-|+++++++.|+++|++..++|+++...+..+.+.+|+..- .+++ .- .|+....+++.+.... .++
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l 166 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEAL 166 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheE
Confidence 346789999999999999999999999999999999999999733 2333 22 3455555555555443 599
Q ss_pred EEcCCccCHHHHhhCC---eeEEeCCC-CcHHHHhhcCEEEecCCcchHHHHHH
Q 001837 591 MIGDGINDAPALATAD---IGISMGIS-GSALATETGQVILMSNDIRKVPEAIR 640 (1007)
Q Consensus 591 mVGDG~NDa~ALk~AD---VGIAmg~~-gs~~A~~aADiVLl~~~l~~I~~lI~ 640 (1007)
||||..+|..|-++|+ ||+..|.. ........+|+++ +++..|...+.
T Consensus 167 ~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi--~~~~el~~~l~ 218 (220)
T COG0546 167 MVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVI--DSLAELLALLA 218 (220)
T ss_pred EECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEE--CCHHHHHHHHh
Confidence 9999999999999998 77888742 4556777799998 77888776654
No 65
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.09 E-value=7.1e-06 Score=84.18 Aligned_cols=80 Identities=33% Similarity=0.428 Sum_probs=68.4
Q ss_pred ccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEEe-------------------ccCHhHHHHHHHHHh
Q 001837 524 CRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHS-------------------ELLPEDKAKIINQFK 584 (1007)
Q Consensus 524 lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~a-------------------r~sPeqK~~iV~~Lq 584 (1007)
++|++.+.++.+++.|++++++||.....+..+++.+|+. .+|+ ...+..|..+++.++
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~--~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~~~~ 151 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGID--DVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKELL 151 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCc--hheeeeEEECCCCEEeCccCCcccCCcchHHHHHHHHH
Confidence 5899999999999999999999999999999999999987 3332 133578999999876
Q ss_pred hC-C----eEEEEcCCccCHHHHhhC
Q 001837 585 QE-G----KTAMIGDGINDAPALATA 605 (1007)
Q Consensus 585 ~~-G----~VamVGDG~NDa~ALk~A 605 (1007)
+. | .+.|+|||.||.+|++.|
T Consensus 152 ~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 152 EESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 54 3 599999999999999875
No 66
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=98.07 E-value=2.1e-05 Score=84.06 Aligned_cols=119 Identities=21% Similarity=0.256 Sum_probs=86.7
Q ss_pred CcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc--eEEec-----cCH--hHHHHHHHHHhhCC-eEEE
Q 001837 522 DACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN--VVHSE-----LLP--EDKAKIINQFKQEG-KTAM 591 (1007)
Q Consensus 522 D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~--~V~ar-----~sP--eqK~~iV~~Lq~~G-~Vam 591 (1007)
..+.|++.++++.|++.|+++.++|+........+.+.+|+... .+++. ..| +--..+++.++... .++|
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~ 171 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPEEMLF 171 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCCCCCCcChHHHHHHHHHcCCChhheEE
Confidence 45789999999999999999999999999999999999998621 23321 223 22233444444333 6999
Q ss_pred EcCCccCHHHHhhCCe-eEEeC--CC-CcHHHHhhcCEEEecCCcchHHHHHHHH
Q 001837 592 IGDGINDAPALATADI-GISMG--IS-GSALATETGQVILMSNDIRKVPEAIRLA 642 (1007)
Q Consensus 592 VGDG~NDa~ALk~ADV-GIAmg--~~-gs~~A~~aADiVLl~~~l~~I~~lI~~g 642 (1007)
+||+.+|..+.++|++ +|.+. .. ..+.....+|+++ +++..+..++.++
T Consensus 172 igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~~ 224 (226)
T PRK13222 172 VGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGLA 224 (226)
T ss_pred ECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHHh
Confidence 9999999999999998 55543 11 2234455788887 7899888877643
No 67
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=98.06 E-value=9.2e-06 Score=84.00 Aligned_cols=89 Identities=21% Similarity=0.279 Sum_probs=73.9
Q ss_pred CcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc--eEEec-----------cCH------------hHH
Q 001837 522 DACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN--VVHSE-----------LLP------------EDK 576 (1007)
Q Consensus 522 D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~--~V~ar-----------~sP------------eqK 576 (1007)
-+++|++.+.++.|++.|+++.++|+........+.+..|+..- .+++. ..| ..|
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~K 150 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCCK 150 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCCCH
Confidence 47899999999999999999999999999999999999998632 23321 111 249
Q ss_pred HHHHHHHhhC-C-eEEEEcCCccCHHHHhhCCeeEE
Q 001837 577 AKIINQFKQE-G-KTAMIGDGINDAPALATADIGIS 610 (1007)
Q Consensus 577 ~~iV~~Lq~~-G-~VamVGDG~NDa~ALk~ADVGIA 610 (1007)
..+++.+++. . .+.|+|||.||..|.++||+-.|
T Consensus 151 ~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 151 GKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred HHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 9999999886 5 89999999999999999988654
No 68
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=98.05 E-value=1.1e-05 Score=86.45 Aligned_cols=88 Identities=22% Similarity=0.209 Sum_probs=73.6
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEEec---cC----------H----------hHHHHH
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSE---LL----------P----------EDKAKI 579 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~ar---~s----------P----------eqK~~i 579 (1007)
+++|++.+.++.|++.|+++.++|+-....+..+.+.+ +....+++. .+ | ..|..+
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~~~ 152 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKPSL 152 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCCchHHH
Confidence 57999999999999999999999999999999999998 654345533 11 1 248899
Q ss_pred HHHHhhCC-eEEEEcCCccCHHHHhhCCeeEEe
Q 001837 580 INQFKQEG-KTAMIGDGINDAPALATADIGISM 611 (1007)
Q Consensus 580 V~~Lq~~G-~VamVGDG~NDa~ALk~ADVGIAm 611 (1007)
++.++... .+.|||||.||.+|.++||+.++-
T Consensus 153 l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~ 185 (219)
T PRK09552 153 IRKLSDTNDFHIVIGDSITDLEAAKQADKVFAR 185 (219)
T ss_pred HHHhccCCCCEEEEeCCHHHHHHHHHCCcceeH
Confidence 99888765 899999999999999999997763
No 69
>PRK08238 hypothetical protein; Validated
Probab=98.04 E-value=0.00011 Score=87.68 Aligned_cols=119 Identities=18% Similarity=0.177 Sum_probs=85.6
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEEe-----ccCHhHHHHHHHHHhhCCeEEEEcCCcc
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHS-----ELLPEDKAKIINQFKQEGKTAMIGDGIN 597 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~a-----r~sPeqK~~iV~~Lq~~G~VamVGDG~N 597 (1007)
|++|++.+.++++++.|++++++|+-....+..+++.+|+.. .+.+ +..|+.|...++.....+.+.|+||..+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd-~Vigsd~~~~~kg~~K~~~l~~~l~~~~~~yvGDS~~ 150 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFD-GVFASDGTTNLKGAAKAAALVEAFGERGFDYAGNSAA 150 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC-EEEeCCCccccCCchHHHHHHHHhCccCeeEecCCHH
Confidence 478999999999999999999999999999999999999732 4443 3467778776553332234788999999
Q ss_pred CHHHHhhCCeeEEeCCCCcH---HHHhhcCEEE-ecCCcchHHHHHHHHH
Q 001837 598 DAPALATADIGISMGISGSA---LATETGQVIL-MSNDIRKVPEAIRLAR 643 (1007)
Q Consensus 598 Da~ALk~ADVGIAmg~~gs~---~A~~aADiVL-l~~~l~~I~~lI~~gR 643 (1007)
|.|+++.|+-.++++ .+.. .|++....++ ....-..+...+++.|
T Consensus 151 Dlp~~~~A~~av~Vn-~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~l~R 199 (479)
T PRK08238 151 DLPVWAAARRAIVVG-ASPGVARAARALGPVERVFPPRPARLRTWLKALR 199 (479)
T ss_pred HHHHHHhCCCeEEEC-CCHHHHHHHHHcCCcceecCCCchHHHHHHHHhC
Confidence 999999999999997 4433 3333344333 2233334444555544
No 70
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=98.02 E-value=1.7e-05 Score=83.41 Aligned_cols=90 Identities=16% Similarity=0.139 Sum_probs=76.1
Q ss_pred cCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEEec------------------cCHhHHHHHHHH
Q 001837 521 SDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSE------------------LLPEDKAKIINQ 582 (1007)
Q Consensus 521 ~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~ar------------------~sPeqK~~iV~~ 582 (1007)
...++|++.+.|+.+++.|++++++|+.....+..+++.+|++ .+|+. ..++.|...++.
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~--~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~ 162 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGID--NAIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAE 162 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCc--ceEecceEEcCCCEEeCCccCCCCCChHHHHHHHH
Confidence 4468999999999999999999999999999999999999997 44432 224678888877
Q ss_pred Hhh-CC----eEEEEcCCccCHHHHhhCCeeEEeC
Q 001837 583 FKQ-EG----KTAMIGDGINDAPALATADIGISMG 612 (1007)
Q Consensus 583 Lq~-~G----~VamVGDG~NDa~ALk~ADVGIAmg 612 (1007)
+.+ .+ .+.++||+.+|.|+++.|+.++.+.
T Consensus 163 ~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 163 LLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred HHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 654 34 5899999999999999999999885
No 71
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=97.87 E-value=7.1e-05 Score=79.12 Aligned_cols=116 Identities=20% Similarity=0.255 Sum_probs=82.2
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc--ceEEec-----cC--HhHHHHHHHHHhhCC-eEEEE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL--NVVHSE-----LL--PEDKAKIINQFKQEG-KTAMI 592 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~--~~V~ar-----~s--PeqK~~iV~~Lq~~G-~VamV 592 (1007)
++.|++.+++++|++.|+++.++|+.....+..+-+.+|+.. +.+++. .. |+-=..+++.++-.. .++||
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~l~i 154 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDAVMV 154 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhheEEE
Confidence 678999999999999999999999999999999999999862 233321 12 222233333333222 59999
Q ss_pred cCCccCHHHHhhCCee---EEeCC-CCcHHHHhhcCEEEecCCcchHHHHHH
Q 001837 593 GDGINDAPALATADIG---ISMGI-SGSALATETGQVILMSNDIRKVPEAIR 640 (1007)
Q Consensus 593 GDG~NDa~ALk~ADVG---IAmg~-~gs~~A~~aADiVLl~~~l~~I~~lI~ 640 (1007)
||+.+|..+.+++++. +.-|. +..+.....+|+++ +++..|..+++
T Consensus 155 gD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~--~~~~~l~~~~~ 204 (205)
T TIGR01454 155 GDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLL--RKPQSLLALCR 204 (205)
T ss_pred cCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeee--CCHHHHHHHhh
Confidence 9999999999999974 33331 22234566799987 66776665543
No 72
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.85 E-value=9.8e-05 Score=81.80 Aligned_cols=59 Identities=10% Similarity=0.078 Sum_probs=47.9
Q ss_pred CCeEEEEEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCC
Q 001837 502 GNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNA 563 (1007)
Q Consensus 502 g~~~i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~ 563 (1007)
....++.-.||+++.- ...+-+.++++|++|++.|+++++.||-....+..+++++|++
T Consensus 6 ~~~lI~~DlDGTLL~~---~~~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~ 64 (271)
T PRK03669 6 DPLLIFTDLDGTLLDS---HTYDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQ 64 (271)
T ss_pred CCeEEEEeCccCCcCC---CCcCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCC
Confidence 3456667778888631 2235577999999999999999999999999999999999874
No 73
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=97.84 E-value=0.00021 Score=87.77 Aligned_cols=70 Identities=29% Similarity=0.474 Sum_probs=65.5
Q ss_pred eEEEEEecCCCCchHHHHHHHHHhCCCCeeEEEEecCCCeEEEEEcCCcccHHHHHHHhhhccccccccc
Q 001837 10 QKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARFEANVRA 79 (1007)
Q Consensus 10 ~~~~l~V~Gm~C~~Ca~~IE~~L~~l~GV~~v~Vn~~t~tv~V~~D~~~~s~~~I~~aL~~aGy~as~~~ 79 (1007)
.+.+++|.||+|.+|++.+|+.|+..+||.++.+...+....+.|||..++.+.+.+.+++.|+.+.+.+
T Consensus 69 ~~~~l~v~GmtC~scv~~i~~~l~~~~gv~~~~val~~~~~~v~~dp~v~s~~~~~e~ie~~gf~a~~i~ 138 (951)
T KOG0207|consen 69 SKCYLSVNGMTCASCVATIERNLRKIEGVESAVVALSASKAEVIYDPAVTSPDSIAESIEDLGFSAELIE 138 (951)
T ss_pred ceeEEEecCceeHHHHHHHHHHhhccCCcceEEEEeeccceeEEECCcccCchhHHHHHHhcCccceehh
Confidence 3678999999999999999999999999999999999999999999999999999999999999887543
No 74
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.78 E-value=0.00017 Score=80.03 Aligned_cols=57 Identities=16% Similarity=0.111 Sum_probs=46.7
Q ss_pred eEEEEEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCC
Q 001837 504 TIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNA 563 (1007)
Q Consensus 504 ~~i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~ 563 (1007)
..++.-.|++++.- .+.+.+.++++|++|++.|++++++||.....+..+.+++|+.
T Consensus 5 kli~~DlDGTLl~~---~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~ 61 (273)
T PRK00192 5 LLVFTDLDGTLLDH---HTYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLE 61 (273)
T ss_pred eEEEEcCcccCcCC---CCcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 34556667777641 3456778999999999999999999999999999999999875
No 75
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.78 E-value=0.0001 Score=70.78 Aligned_cols=91 Identities=23% Similarity=0.373 Sum_probs=69.8
Q ss_pred ecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCC--cceEEe-----------------------ccCHh
Q 001837 520 LSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNA--LNVVHS-----------------------ELLPE 574 (1007)
Q Consensus 520 l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~--~~~V~a-----------------------r~sPe 574 (1007)
...++++++.+.+++|++.|++++++||.....+..+.++.|+. ...+++ +-.|+
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPD 100 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccCCCCHH
Confidence 44588999999999999999999999999999999999999973 223332 33444
Q ss_pred HHHHHHHHHhhCC-eEEEEcCCccCHHHHhhC-CeeEE
Q 001837 575 DKAKIINQFKQEG-KTAMIGDGINDAPALATA-DIGIS 610 (1007)
Q Consensus 575 qK~~iV~~Lq~~G-~VamVGDG~NDa~ALk~A-DVGIA 610 (1007)
.+..+.+.+.... .++|+||+.+|..|++.+ .-+|+
T Consensus 101 ~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 101 KLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred HHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 5555555554433 799999999999999984 44443
No 76
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.75 E-value=0.00014 Score=77.46 Aligned_cols=115 Identities=19% Similarity=0.223 Sum_probs=81.4
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc--eEEe-cc------CHhHHHHHHHHHhhCC-eEEEE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN--VVHS-EL------LPEDKAKIINQFKQEG-KTAMI 592 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~--~V~a-r~------sPeqK~~iV~~Lq~~G-~VamV 592 (1007)
++.|++.++++.|++.|+++.++|+.....+..+-+.+|+..- .+++ .. .|+--.++++.+.... .++||
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~i 161 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEALMV 161 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHEEEE
Confidence 3679999999999999999999999999999999999999731 2222 11 2333334444443222 69999
Q ss_pred cCCccCHHHHhhCCe---eEEeCCCCc-HHHHhhcCEEEecCCcchHHHHH
Q 001837 593 GDGINDAPALATADI---GISMGISGS-ALATETGQVILMSNDIRKVPEAI 639 (1007)
Q Consensus 593 GDG~NDa~ALk~ADV---GIAmg~~gs-~~A~~aADiVLl~~~l~~I~~lI 639 (1007)
||..+|..|-++|++ |+.-|.... +.....+|+++ +++..+..++
T Consensus 162 GDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i--~~~~~l~~~i 210 (214)
T PRK13288 162 GDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFML--DKMSDLLAIV 210 (214)
T ss_pred CCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEE--CCHHHHHHHH
Confidence 999999999999997 343331111 23345688887 6788777755
No 77
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=97.70 E-value=0.00022 Score=78.22 Aligned_cols=52 Identities=21% Similarity=0.272 Sum_probs=41.8
Q ss_pred eEEEEcCCccCHHHHhhCCeeEEeCCCCc---HHHHhh--c-CEEEecCCcchHHHHHH
Q 001837 588 KTAMIGDGINDAPALATADIGISMGISGS---ALATET--G-QVILMSNDIRKVPEAIR 640 (1007)
Q Consensus 588 ~VamVGDG~NDa~ALk~ADVGIAmg~~gs---~~A~~a--A-DiVLl~~~l~~I~~lI~ 640 (1007)
.|+++||+.||.+||+.|++||+|+ ++. +..++. | ++|..+++-..+.++++
T Consensus 196 ~~~a~GD~~ND~~Ml~~ag~~vam~-Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 196 KVVGLGDSPNDLPLLEVVDLAVVVP-GPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred eEEEEcCCHhhHHHHHHCCEEEEeC-CCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 4999999999999999999999999 554 356665 4 47776777777777765
No 78
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.63 E-value=0.00047 Score=81.17 Aligned_cols=207 Identities=16% Similarity=0.182 Sum_probs=139.2
Q ss_pred CCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc-------------------------
Q 001837 511 GASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN------------------------- 565 (1007)
Q Consensus 511 d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~------------------------- 565 (1007)
+..|.|++.+..+.+++....|+.|-++-||.+-.|-.++...+-.|+++||..-
T Consensus 814 GQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~ 893 (1354)
T KOG4383|consen 814 GQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQF 893 (1354)
T ss_pred cchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChhh
Confidence 3478999999999999999999999999999999999999999999999998531
Q ss_pred ----------------------------------------------------------------------------eEEe
Q 001837 566 ----------------------------------------------------------------------------VVHS 569 (1007)
Q Consensus 566 ----------------------------------------------------------------------------~V~a 569 (1007)
-.|.
T Consensus 894 a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFT 973 (1354)
T KOG4383|consen 894 AAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFT 973 (1354)
T ss_pred hccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeecc
Confidence 3588
Q ss_pred ccCHhHHHHHHHHHhhCC-eEEEEcCCccCHH--HHhhCCeeEEeCCC------------CcH--HHHh-----------
Q 001837 570 ELLPEDKAKIINQFKQEG-KTAMIGDGINDAP--ALATADIGISMGIS------------GSA--LATE----------- 621 (1007)
Q Consensus 570 r~sPeqK~~iV~~Lq~~G-~VamVGDG~NDa~--ALk~ADVGIAmg~~------------gs~--~A~~----------- 621 (1007)
.++|+.--++|+.+|+.| +|+.+|.-.|-.- .+-+|||+|++-.- ++. .|+.
T Consensus 974 DcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglsplQiSg 1053 (1354)
T KOG4383|consen 974 DCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISG 1053 (1354)
T ss_pred CCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCceeecc
Confidence 899999999999999999 7888898877533 45679999987411 111 1111
Q ss_pred -----hcCEEEecCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHhhhHHHHHHHHHHHHHHHHHHHhh
Q 001837 622 -----TGQVILMSNDIRKVPEAIRLARKAHWKVIENIAVSIATKAGII----ALALGGHPLVWAAVLADVGTCLIVILNS 692 (1007)
Q Consensus 622 -----aADiVLl~~~l~~I~~lI~~gR~~~~~i~~ni~~al~~ni~~i----~la~~g~~~~~~ail~~~~s~l~vvlNS 692 (1007)
+.|+-+-...+-++.++|.-+|..+.-+++.+.|.+...+... +-.++-.|+++...-+-.++++.+-+-+
T Consensus 1054 qLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~PlL~ 1133 (1354)
T KOG4383|consen 1054 QLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQAQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCIPLLF 1133 (1354)
T ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhccchHHHHHHHHHHHHH
Confidence 1222222223445678888899999999999888766554433 2233333333322222223444444444
Q ss_pred hhhcccccCCCCcccccCCCCCccc
Q 001837 693 MLLLHETHTHRGKCIKSSSSSSHTH 717 (1007)
Q Consensus 693 lrll~~~~~~~~~~~r~~~~~~~~~ 717 (1007)
+--+-.++++.+...|++-.|.|..
T Consensus 1134 i~tL~gk~~hkSii~maagKNlqeI 1158 (1354)
T KOG4383|consen 1134 IGTLFGKFEHKSIIIMAAGKNLQEI 1158 (1354)
T ss_pred HHHHhcCCCccceEEeeccCChhhc
Confidence 4433344555555555553344433
No 79
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.61 E-value=0.00027 Score=78.45 Aligned_cols=117 Identities=20% Similarity=0.367 Sum_probs=82.4
Q ss_pred CcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc--ceEE-eccCHhHHH--HHHH-HHhhCC----eEEE
Q 001837 522 DACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL--NVVH-SELLPEDKA--KIIN-QFKQEG----KTAM 591 (1007)
Q Consensus 522 D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~--~~V~-ar~sPeqK~--~iV~-~Lq~~G----~Vam 591 (1007)
.++.|++.++|+.|++.|+++.|+|+.....+..+.+++|+.. +.++ +...+..|. .+++ .+++.| .++|
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l~ 179 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSLF 179 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHEEE
Confidence 4678999999999999999999999999999999999999862 1232 222232332 2332 333333 5999
Q ss_pred EcCCccCHHHHhhCCe-eEEe--CC-CCcHHHHhhcCEEEecCCcchHHHHHH
Q 001837 592 IGDGINDAPALATADI-GISM--GI-SGSALATETGQVILMSNDIRKVPEAIR 640 (1007)
Q Consensus 592 VGDG~NDa~ALk~ADV-GIAm--g~-~gs~~A~~aADiVLl~~~l~~I~~lI~ 640 (1007)
|||+.||..+.++|++ .|.+ |. ...+.....+|.++ +++..|..++.
T Consensus 180 IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi--~~l~el~~~~~ 230 (272)
T PRK13223 180 VGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVI--DDLRALLPGCA 230 (272)
T ss_pred ECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEE--CCHHHHHHHHh
Confidence 9999999999999997 3443 31 12223445789888 67887776544
No 80
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=97.58 E-value=0.00035 Score=75.72 Aligned_cols=65 Identities=17% Similarity=0.213 Sum_probs=51.3
Q ss_pred HHHHHHHHHhhC-C----eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcC----EEEecCCcchHHHHHH
Q 001837 575 DKAKIINQFKQE-G----KTAMIGDGINDAPALATADIGISMGISGSALATETGQ----VILMSNDIRKVPEAIR 640 (1007)
Q Consensus 575 qK~~iV~~Lq~~-G----~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aAD----iVLl~~~l~~I~~lI~ 640 (1007)
.|...++.|.++ | .|+++||+.||.+||+.+++||+|+ ++.+..++.|| +|.-.++=..+.++|.
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~-na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~ 232 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVG-NHDPELEGLRHQQRIYFANNPHAFGILEGIN 232 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEc-CCcHHHHHhhcCCcEEEcCCCChhHHHHHHH
Confidence 466677776554 4 4999999999999999999999999 77888888899 6655555566766664
No 81
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.55 E-value=0.00032 Score=75.12 Aligned_cols=111 Identities=14% Similarity=0.113 Sum_probs=78.3
Q ss_pred CcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc--eEEec-----cCHhHHHHHHHHHhhCC----eEE
Q 001837 522 DACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN--VVHSE-----LLPEDKAKIINQFKQEG----KTA 590 (1007)
Q Consensus 522 D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~--~V~ar-----~sPeqK~~iV~~Lq~~G----~Va 590 (1007)
-++.|++.++|+.|++.|+++.++|+........+.+++|+..- .++.. ..|... -+.+.+++.| .++
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~-~~~~~~~~~~~~~~~~~ 169 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKLPYSKPHPE-VYLNCAAKLGVDPLTCV 169 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccCCCCCCCHH-HHHHHHHHcCCCHHHeE
Confidence 46789999999999999999999999999999999999998621 22221 123222 3444455555 599
Q ss_pred EEcCCccCHHHHhhCCeeE-EeCCCCc---HHHHhhcCEEEecCCcchHH
Q 001837 591 MIGDGINDAPALATADIGI-SMGISGS---ALATETGQVILMSNDIRKVP 636 (1007)
Q Consensus 591 mVGDG~NDa~ALk~ADVGI-Amg~~gs---~~A~~aADiVLl~~~l~~I~ 636 (1007)
||||..+|..|.++|++.. .+. .+. +.-...+|+++ .+|..+.
T Consensus 170 ~igDs~~Di~aA~~aG~~~i~v~-~~~~~~~~~~~~~~~~~--~~~~dl~ 216 (222)
T PRK10826 170 ALEDSFNGMIAAKAARMRSIVVP-APEQQNDPRWALADVKL--ESLTELT 216 (222)
T ss_pred EEcCChhhHHHHHHcCCEEEEec-CCccCchhhhhhhheec--cCHHHHh
Confidence 9999999999999999753 332 221 12233577776 5566554
No 82
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.54 E-value=0.0003 Score=74.45 Aligned_cols=112 Identities=20% Similarity=0.288 Sum_probs=79.3
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc--ceEEec-----cCHhHHHHHHHHHhhCC----eEEE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL--NVVHSE-----LLPEDKAKIINQFKQEG----KTAM 591 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~--~~V~ar-----~sPeqK~~iV~~Lq~~G----~Vam 591 (1007)
++.|++.++++.|++.|+++.++|+-+...+..+.+.+|+.. +.+++. ..|. ...+.+.+++.| .++|
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~-p~~~~~~~~~~~~~~~~~~~ 163 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSLAQRKPH-PDPLLLAAERLGVAPQQMVY 163 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCCCCCCCC-hHHHHHHHHHcCCChhHeEE
Confidence 578999999999999999999999999999999999999852 133332 1221 123334444444 5999
Q ss_pred EcCCccCHHHHhhCCee-EEe--CCCC-cHHHHhhcCEEEecCCcchHHH
Q 001837 592 IGDGINDAPALATADIG-ISM--GISG-SALATETGQVILMSNDIRKVPE 637 (1007)
Q Consensus 592 VGDG~NDa~ALk~ADVG-IAm--g~~g-s~~A~~aADiVLl~~~l~~I~~ 637 (1007)
|||..+|..|.++|++- |.+ |... .......+|+++ +++..+..
T Consensus 164 igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i--~~~~~l~~ 211 (213)
T TIGR01449 164 VGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLY--DSLNELPP 211 (213)
T ss_pred eCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEe--CCHHHHHh
Confidence 99999999999999974 333 3111 123345688887 66766654
No 83
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=97.48 E-value=0.00076 Score=75.01 Aligned_cols=113 Identities=18% Similarity=0.247 Sum_probs=81.2
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc--eEE-eccCHhHHHHHH-HHHhhCC----eEEEEcC
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN--VVH-SELLPEDKAKII-NQFKQEG----KTAMIGD 594 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~--~V~-ar~sPeqK~~iV-~~Lq~~G----~VamVGD 594 (1007)
++.|++.++++.|++.|+++.++|+.+...+..+-+.+|+... .+. +...+ .|...+ ..+++.| .++||||
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~~~-~k~~~~~~~l~~~~~~p~~~l~IGD 220 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTPIL-SKRRALSQLVAREGWQPAAVMYVGD 220 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCCCC-CCHHHHHHHHHHhCcChhHEEEECC
Confidence 5689999999999999999999999999999999999998632 121 22111 133333 3334333 5999999
Q ss_pred CccCHHHHhhCCee---EEeCCCCcH--HHHhhcCEEEecCCcchHHHHH
Q 001837 595 GINDAPALATADIG---ISMGISGSA--LATETGQVILMSNDIRKVPEAI 639 (1007)
Q Consensus 595 G~NDa~ALk~ADVG---IAmg~~gs~--~A~~aADiVLl~~~l~~I~~lI 639 (1007)
+.+|..|-++|++- +.-| .... .....+|+++ +++..|..++
T Consensus 221 s~~Di~aA~~AG~~~I~v~~g-~~~~~~l~~~~ad~~i--~~~~eL~~~~ 267 (273)
T PRK13225 221 ETRDVEAARQVGLIAVAVTWG-FNDRQSLVAACPDWLL--ETPSDLLQAV 267 (273)
T ss_pred CHHHHHHHHHCCCeEEEEecC-CCCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence 99999999999873 3233 1122 3344689988 7788887765
No 84
>PRK06769 hypothetical protein; Validated
Probab=97.38 E-value=0.00073 Score=69.94 Aligned_cols=108 Identities=16% Similarity=0.056 Sum_probs=75.1
Q ss_pred CCeEEEEEECCEEEEEEEecC----cccccHHHHHHHHHHCCCeEEEEcCCCHH--------HHHHHHHHhCCCcceEEe
Q 001837 502 GNTIGYIFSGASPVGIFCLSD----ACRTGAAEAVNQLKSLGIRTAMLTGDNQS--------AAMQAQEQLGNALNVVHS 569 (1007)
Q Consensus 502 g~~~i~v~~d~~~lGli~l~D----~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~--------tA~~vA~~lGI~~~~V~a 569 (1007)
+++.+.+.+|+++.|-..+.+ ++.|++++++++|++.|+++.++|+.... ......+..|+. .+|.
T Consensus 3 ~~~~~~~d~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~--~~~~ 80 (173)
T PRK06769 3 NIQAIFIDRDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFD--DIYL 80 (173)
T ss_pred CCcEEEEeCCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcC--EEEE
Confidence 567888899999877744443 36899999999999999999999987641 233445567876 5442
Q ss_pred c----------cCH--hHHHHHHHHHhhCC-eEEEEcCCccCHHHHhhCCee-EEe
Q 001837 570 E----------LLP--EDKAKIINQFKQEG-KTAMIGDGINDAPALATADIG-ISM 611 (1007)
Q Consensus 570 r----------~sP--eqK~~iV~~Lq~~G-~VamVGDG~NDa~ALk~ADVG-IAm 611 (1007)
. ..| +-=..+++.+...- .+.||||..+|..|-++|++- |.+
T Consensus 81 ~~~~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v 136 (173)
T PRK06769 81 CPHKHGDGCECRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTILV 136 (173)
T ss_pred CcCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEE
Confidence 1 122 22233444443222 699999999999999999973 444
No 85
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=97.37 E-value=0.00097 Score=72.02 Aligned_cols=116 Identities=15% Similarity=0.092 Sum_probs=80.3
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc--eEEe-cc----C--HhHHHHHHHHHhhCC-eEEEE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN--VVHS-EL----L--PEDKAKIINQFKQEG-KTAMI 592 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~--~V~a-r~----s--PeqK~~iV~~Lq~~G-~VamV 592 (1007)
++.|++.+.+++|++.|+++.++|+.+...+..+-+.+|+... .+++ .. . |+-=..+++.+.-.. .++||
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~l~I 174 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDCVYV 174 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCChhhEEEe
Confidence 5789999999999999999999999999988888899998631 2322 11 2 222233344443322 69999
Q ss_pred cCCccCHHHHhhCCee---EEeCCCCc--HHHHhhcCEEEecCCcchHHHHHH
Q 001837 593 GDGINDAPALATADIG---ISMGISGS--ALATETGQVILMSNDIRKVPEAIR 640 (1007)
Q Consensus 593 GDG~NDa~ALk~ADVG---IAmg~~gs--~~A~~aADiVLl~~~l~~I~~lI~ 640 (1007)
||+.+|..|-++|++- +.-|.... ......+|+++ +++..|.+.+.
T Consensus 175 GDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~~~ 225 (229)
T PRK13226 175 GDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLV--EQPQLLWNPAT 225 (229)
T ss_pred CCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeee--CCHHHHHHHhc
Confidence 9999999999999864 33332111 12334689988 67777765543
No 86
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=97.28 E-value=0.0024 Score=70.68 Aligned_cols=118 Identities=14% Similarity=0.202 Sum_probs=83.1
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc--eEEecc-----------C--H----hHHHHHHHH-
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN--VVHSEL-----------L--P----EDKAKIINQ- 582 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~--~V~ar~-----------s--P----eqK~~iV~~- 582 (1007)
++|||+.+.++.|++.|+++.++||-....+..+.+++|+... .|+|+. . | ..|.+.+..
T Consensus 121 ~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v~~~ 200 (277)
T TIGR01544 121 MLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDVALR 200 (277)
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHHHHH
Confidence 5799999999999999999999999999999999999998422 332221 1 2 335554432
Q ss_pred ----Hh---hCCeEEEEcCCccCHHHHhhC---C--eeEEeCCCCcH----HHHhhcCEEEecCCcchHHHHHH
Q 001837 583 ----FK---QEGKTAMIGDGINDAPALATA---D--IGISMGISGSA----LATETGQVILMSNDIRKVPEAIR 640 (1007)
Q Consensus 583 ----Lq---~~G~VamVGDG~NDa~ALk~A---D--VGIAmg~~gs~----~A~~aADiVLl~~~l~~I~~lI~ 640 (1007)
++ ....|.|+|||.||+.|..-. . +-|++-....+ .-+++=||||.+|.-..++..|.
T Consensus 201 ~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~~D~t~~v~~~il 274 (277)
T TIGR01544 201 NTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVQDETLEVANSIL 274 (277)
T ss_pred HHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEEECCCCchHHHHHH
Confidence 22 112699999999999996544 1 23333222222 34568899999998777777653
No 87
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=97.23 E-value=0.0018 Score=69.06 Aligned_cols=115 Identities=26% Similarity=0.336 Sum_probs=80.9
Q ss_pred CcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCC----cceEEec-----cCH--hHHHHHHHHHhhC-C-e
Q 001837 522 DACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNA----LNVVHSE-----LLP--EDKAKIINQFKQE-G-K 588 (1007)
Q Consensus 522 D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~----~~~V~ar-----~sP--eqK~~iV~~Lq~~-G-~ 588 (1007)
.++.||+.+.+++|++.|+++.++|+-....+..+.+.+|+. .+.+++. -.| +-=...++.+.-. . .
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~ 165 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQS 165 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCChhH
Confidence 378999999999999999999999999999999999999986 2334332 123 2222233333322 2 5
Q ss_pred EEEEcCCccCHHHHhhCCeeE--EeCCCCc--H--HHHhhcCEEEecCCcchHHHHH
Q 001837 589 TAMIGDGINDAPALATADIGI--SMGISGS--A--LATETGQVILMSNDIRKVPEAI 639 (1007)
Q Consensus 589 VamVGDG~NDa~ALk~ADVGI--Amg~~gs--~--~A~~aADiVLl~~~l~~I~~lI 639 (1007)
++||||+.+|..|-++|++.. ++. .+. . .....+|.++ +++..+..++
T Consensus 166 ~~~igD~~~Di~aa~~aG~~~~i~~~-~g~~~~~~~~~~~~~~~i--~~~~~l~~~~ 219 (220)
T TIGR03351 166 VAVAGDTPNDLEAGINAGAGAVVGVL-TGAHDAEELSRHPHTHVL--DSVADLPALL 219 (220)
T ss_pred eEEeCCCHHHHHHHHHCCCCeEEEEe-cCCCcHHHHhhcCCceee--cCHHHHHHhh
Confidence 999999999999999999975 332 222 1 2234577777 6676665543
No 88
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=97.23 E-value=0.0016 Score=71.29 Aligned_cols=112 Identities=14% Similarity=0.094 Sum_probs=82.0
Q ss_pred ECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc------------------------
Q 001837 510 SGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN------------------------ 565 (1007)
Q Consensus 510 ~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~------------------------ 565 (1007)
-|++++.--.=..+..|.+.++|+++++.|+.+++.||-....+..+.+++++..+
T Consensus 8 lDGTLl~~~~~~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~ 87 (249)
T TIGR01485 8 LDNTLVDHTDGDNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWA 87 (249)
T ss_pred CCCcCcCCCCCChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHH
Confidence 45666521001456789999999999999999999999999999999988886432
Q ss_pred -----------------------------------e----------------------------EEe-----ccCH--hH
Q 001837 566 -----------------------------------V----------------------------VHS-----ELLP--ED 575 (1007)
Q Consensus 566 -----------------------------------~----------------------------V~a-----r~sP--eq 575 (1007)
. +++ .+.| -.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~ 167 (249)
T TIGR01485 88 EYLSEKWQRDIVVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSG 167 (249)
T ss_pred HHHhcccCHHHHHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCC
Confidence 0 010 1122 25
Q ss_pred HHHHHHHHhhC-C----eEEEEcCCccCHHHHhh-CCeeEEeCCCCcHHHHhh
Q 001837 576 KAKIINQFKQE-G----KTAMIGDGINDAPALAT-ADIGISMGISGSALATET 622 (1007)
Q Consensus 576 K~~iV~~Lq~~-G----~VamVGDG~NDa~ALk~-ADVGIAmg~~gs~~A~~a 622 (1007)
|...|+.|.+. | .|+++||+.||.+|++. ++.||+|+ ++.+..++.
T Consensus 168 K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~-na~~~~k~~ 219 (249)
T TIGR01485 168 KGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVS-NAQEELLQW 219 (249)
T ss_pred hHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEEC-CCHHHHHHH
Confidence 77777777654 4 59999999999999998 67999998 666655543
No 89
>TIGR00003 copper ion binding protein. This model describes an apparently copper-specific subfamily of the metal-binding domain HMA (Pfam family pfam00403). Closely related sequences outside this model include mercury resistance proteins and repeated domains of eukaryotic eukaryotic copper transport proteins. Members of this family are strictly prokaryotic. The model identifies both small proteins consisting of just this domain and N-terminal regions of cation (probably copper) transporting ATPases.
Probab=97.21 E-value=0.0018 Score=52.58 Aligned_cols=65 Identities=32% Similarity=0.399 Sum_probs=55.3
Q ss_pred eEEEEEecCCCCchHHHHHHHHHhCCCCeeEEEEecCCCeEEEEEcCCcccHHHHHHHhhhcccc
Q 001837 10 QKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARFE 74 (1007)
Q Consensus 10 ~~~~l~V~Gm~C~~Ca~~IE~~L~~l~GV~~v~Vn~~t~tv~V~~D~~~~s~~~I~~aL~~aGy~ 74 (1007)
++..+.|.|+.|..|++.++..+...+++..+.+++..+++.+.|++.......+...+...||.
T Consensus 2 ~~~~~~v~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 66 (68)
T TIGR00003 2 QKFTVQVMSMTCQHCVDKIEKFVGELEGVSKVQVKLEKASVKVEFDAPQATEICIAEAILDAGYE 66 (68)
T ss_pred cEEEEEECCeEcHHHHHHHHHHHhcCCCEEEEEEEcCCCEEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 45679999999999999999999999999999999999999999987655666676666666653
No 90
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=97.18 E-value=0.0013 Score=72.86 Aligned_cols=131 Identities=17% Similarity=0.199 Sum_probs=91.1
Q ss_pred CeEEEEEECCEEEEEEEe--cCcccccHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHhCCCcc--------------
Q 001837 503 NTIGYIFSGASPVGIFCL--SDACRTGAAEAVNQLKS-LGIRTAMLTGDNQSAAMQAQEQLGNALN-------------- 565 (1007)
Q Consensus 503 ~~~i~v~~d~~~lGli~l--~D~lR~~a~eaI~~Lr~-aGIkv~mlTGD~~~tA~~vA~~lGI~~~-------------- 565 (1007)
...+++..|++++-...= .-.+-++++++|++|++ .|+.++++||.....+..+.+.+++..-
T Consensus 14 ~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~ 93 (266)
T PRK10187 14 NYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKT 93 (266)
T ss_pred CEEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCe
Confidence 456777788888742110 11455789999999998 7999999999999998887776653200
Q ss_pred ---------------------------------------------------------------------eEEeccCH--h
Q 001837 566 ---------------------------------------------------------------------VVHSELLP--E 574 (1007)
Q Consensus 566 ---------------------------------------------------------------------~V~ar~sP--e 574 (1007)
..+.++.| .
T Consensus 94 ~~~~l~~~~~~~i~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~ 173 (266)
T PRK10187 94 HIVHLPDAIARDISVQLHTALAQLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGT 173 (266)
T ss_pred eeccCChhHHHHHHHHHHHHhccCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCC
Confidence 01112223 2
Q ss_pred HHHHHHHHHhhC-C----eEEEEcCCccCHHHHhhC----CeeEEeCCCCcHHHHhhcCEEEecCCcchHHHHHH
Q 001837 575 DKAKIINQFKQE-G----KTAMIGDGINDAPALATA----DIGISMGISGSALATETGQVILMSNDIRKVPEAIR 640 (1007)
Q Consensus 575 qK~~iV~~Lq~~-G----~VamVGDG~NDa~ALk~A----DVGIAmg~~gs~~A~~aADiVLl~~~l~~I~~lI~ 640 (1007)
.|...|+.+.+. | .|+++||+.||.+|++.+ +.||+|| ++. ..|++.| ++...+..++.
T Consensus 174 ~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg-~a~----~~A~~~l--~~~~~v~~~L~ 241 (266)
T PRK10187 174 NKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKVG-TGA----TQASWRL--AGVPDVWSWLE 241 (266)
T ss_pred CHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEEC-CCC----CcCeEeC--CCHHHHHHHHH
Confidence 566666665543 3 589999999999999999 9999998 332 4477777 56776666554
No 91
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=97.15 E-value=0.0016 Score=71.17 Aligned_cols=84 Identities=15% Similarity=0.135 Sum_probs=64.2
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc---ceEEec-----cCHhHHHHHHHHHhhCC-----eE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL---NVVHSE-----LLPEDKAKIINQFKQEG-----KT 589 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~---~~V~ar-----~sPeqK~~iV~~Lq~~G-----~V 589 (1007)
++.|++.+++++|++.|+++.++|+.....+..+-+++|+.. +.|++. -.|. ...+.+.+++.| .+
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~~~~KP~-p~~~~~a~~~l~~~~~~~~ 177 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDVPAGRPA-PWMALKNAIELGVYDVAAC 177 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccCCCCCCC-HHHHHHHHHHcCCCCchhe
Confidence 467999999999999999999999999999999999888762 223321 1232 223344444443 48
Q ss_pred EEEcCCccCHHHHhhCCe
Q 001837 590 AMIGDGINDAPALATADI 607 (1007)
Q Consensus 590 amVGDG~NDa~ALk~ADV 607 (1007)
+||||..+|..|-++|++
T Consensus 178 l~IGDs~~Di~aA~~aGi 195 (253)
T TIGR01422 178 VKVGDTVPDIEEGRNAGM 195 (253)
T ss_pred EEECCcHHHHHHHHHCCC
Confidence 999999999999999996
No 92
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=97.14 E-value=0.0024 Score=69.83 Aligned_cols=110 Identities=16% Similarity=0.166 Sum_probs=76.8
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc---eEEecc----C--HhHHHHHHHHHhhCC-eEEEE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN---VVHSEL----L--PEDKAKIINQFKQEG-KTAMI 592 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~---~V~ar~----s--PeqK~~iV~~Lq~~G-~VamV 592 (1007)
++.|++.++++.|++.|+++.++|+-....+..+-+.+|+..- .+.+.- . |+-=..+.+.+.-.. .++||
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~~l~v 187 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDHTFVF 187 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCCCCCCChHHHHHHHHHhCCChhHEEEE
Confidence 4688999999999999999999999999999999999998721 222222 2 223233334333332 59999
Q ss_pred cCCccCHHHHhhCCee-EEe--CCCCcHHHHhhcCEEEecCCcch
Q 001837 593 GDGINDAPALATADIG-ISM--GISGSALATETGQVILMSNDIRK 634 (1007)
Q Consensus 593 GDG~NDa~ALk~ADVG-IAm--g~~gs~~A~~aADiVLl~~~l~~ 634 (1007)
||..+|..|-++|++- |.+ |..........+|+++ +++..
T Consensus 188 gDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi--~~~~e 230 (248)
T PLN02770 188 EDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLI--KDYED 230 (248)
T ss_pred cCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEe--ccchh
Confidence 9999999999999963 333 3111122234688887 56665
No 93
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=97.09 E-value=0.0043 Score=64.43 Aligned_cols=115 Identities=22% Similarity=0.322 Sum_probs=71.8
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCH---------------HHHHHHHHHhCCCcceEEec----------cC--HhH
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQ---------------SAAMQAQEQLGNALNVVHSE----------LL--PED 575 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~---------------~tA~~vA~~lGI~~~~V~ar----------~s--Peq 575 (1007)
.+.||+.+++++|++.|+++.++|..+. .....+-+..|+..+.++.. .. |+-
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~~i~~~~~~~~~~~~~~KP~p~~ 108 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLDGIYYCPHHPEDGCDCRKPKPGM 108 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccceEEECCCCCCCCCcCCCCCHHH
Confidence 3679999999999999999999998763 11223344567643344421 12 232
Q ss_pred HHHHHHHHhhCC-eEEEEcCCccCHHHHhhCCee-EEeCCCCcH---HHHhhc--CEEEecCCcchHHHHHH
Q 001837 576 KAKIINQFKQEG-KTAMIGDGINDAPALATADIG-ISMGISGSA---LATETG--QVILMSNDIRKVPEAIR 640 (1007)
Q Consensus 576 K~~iV~~Lq~~G-~VamVGDG~NDa~ALk~ADVG-IAmg~~gs~---~A~~aA--DiVLl~~~l~~I~~lI~ 640 (1007)
-..+++.+.-.. .++||||..+|..+-++|++- |.+. .|.. .....+ |+++ +++..+..++.
T Consensus 109 ~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~-~g~~~~~~~~~~~~~~~ii--~~l~el~~~l~ 177 (181)
T PRK08942 109 LLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVR-TGKGVTTLAEGAAPGTWVL--DSLADLPQALK 177 (181)
T ss_pred HHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEc-CCCCchhhhcccCCCceee--cCHHHHHHHHH
Confidence 233344343322 699999999999999999973 3332 2221 112235 7776 66777766553
No 94
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=97.03 E-value=0.0013 Score=71.55 Aligned_cols=86 Identities=19% Similarity=0.212 Sum_probs=66.8
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCC----CHHHHHHHHHHhCCC--c--ceEEeccCH--hHHHHHHHHHhhCCeEEEE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGD----NQSAAMQAQEQLGNA--L--NVVHSELLP--EDKAKIINQFKQEGKTAMI 592 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD----~~~tA~~vA~~lGI~--~--~~V~ar~sP--eqK~~iV~~Lq~~G~VamV 592 (1007)
.+.+++++.++.|++.|+++.++|+- ...++..+.+.+|+. . ..++..-++ .+|.. .+++.|.++|+
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~~K~~K~~---~l~~~~i~I~I 190 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKPGQYTKTQ---WLKKKNIRIFY 190 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCCCCCCHHH---HHHhcCCeEEE
Confidence 36788999999999999999999994 577999999999993 2 244544332 34544 45566789999
Q ss_pred cCCccCHHHHhhCCe-eEEe
Q 001837 593 GDGINDAPALATADI-GISM 611 (1007)
Q Consensus 593 GDG~NDa~ALk~ADV-GIAm 611 (1007)
||..+|..|-++|++ +|.+
T Consensus 191 GDs~~Di~aA~~AGi~~I~v 210 (237)
T PRK11009 191 GDSDNDITAAREAGARGIRI 210 (237)
T ss_pred cCCHHHHHHHHHcCCcEEEE
Confidence 999999999999987 4443
No 95
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=97.00 E-value=0.0014 Score=71.37 Aligned_cols=84 Identities=13% Similarity=0.087 Sum_probs=63.4
Q ss_pred ccccHHHHHHHHHHCCCeEEEEcCC----CHHHHHHHHHHhCCCc--ceEEeccC-HhHHHHHHHHHhhCCeEEEEcCCc
Q 001837 524 CRTGAAEAVNQLKSLGIRTAMLTGD----NQSAAMQAQEQLGNAL--NVVHSELL-PEDKAKIINQFKQEGKTAMIGDGI 596 (1007)
Q Consensus 524 lR~~a~eaI~~Lr~aGIkv~mlTGD----~~~tA~~vA~~lGI~~--~~V~ar~s-PeqK~~iV~~Lq~~G~VamVGDG~ 596 (1007)
+.+++++.++++++.|+++.++|+- ...++..+.+.+|+.. ..++..-. +.-|......+++.|.++|+||..
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~~Kp~~~~~l~~~~i~i~vGDs~ 194 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQYQYTKTQWIQDKNIRIHYGDSD 194 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCCCCCCHHHHHHhCCCeEEEeCCH
Confidence 3445999999999999999999997 7789999999999974 23444222 111111224556677889999999
Q ss_pred cCHHHHhhCCe
Q 001837 597 NDAPALATADI 607 (1007)
Q Consensus 597 NDa~ALk~ADV 607 (1007)
||..|-++|++
T Consensus 195 ~DI~aAk~AGi 205 (237)
T TIGR01672 195 NDITAAKEAGA 205 (237)
T ss_pred HHHHHHHHCCC
Confidence 99999999986
No 96
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=96.99 E-value=0.004 Score=68.79 Aligned_cols=112 Identities=16% Similarity=0.212 Sum_probs=78.1
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc--ceEEec-----cCHhHHHHHHHHHhhCC----eEEE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL--NVVHSE-----LLPEDKAKIINQFKQEG----KTAM 591 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~--~~V~ar-----~sPeqK~~iV~~Lq~~G----~Vam 591 (1007)
++.|++.+++++|++.|+++.++|+.....+..+-+.+|+.. +.+++. -.|. -.-+...+++.| .++|
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~~~~KP~-Pe~~~~a~~~l~~~p~~~l~ 187 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVYRGKPD-PEMFMYAAERLGFIPERCIV 187 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccCCCCCCC-HHHHHHHHHHhCCChHHeEE
Confidence 468999999999999999999999999999999999999863 223221 1232 112233344444 5999
Q ss_pred EcCCccCHHHHhhCCee-EEeCCCCcHHHHhhcCEEEecCCcchHHH
Q 001837 592 IGDGINDAPALATADIG-ISMGISGSALATETGQVILMSNDIRKVPE 637 (1007)
Q Consensus 592 VGDG~NDa~ALk~ADVG-IAmg~~gs~~A~~aADiVLl~~~l~~I~~ 637 (1007)
|||..+|..|-++|++- |++...........+|+++ +++..+..
T Consensus 188 IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi--~~~~el~~ 232 (260)
T PLN03243 188 FGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVV--RRLDDLSV 232 (260)
T ss_pred EcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEe--CCHHHHHH
Confidence 99999999999999973 3442122233334578876 56665543
No 97
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=96.99 E-value=0.0035 Score=69.33 Aligned_cols=115 Identities=15% Similarity=0.171 Sum_probs=79.4
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc---ceEEec-c----CHhHHHHHHHHHhhCC-----eE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL---NVVHSE-L----LPEDKAKIINQFKQEG-----KT 589 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~---~~V~ar-~----sPeqK~~iV~~Lq~~G-----~V 589 (1007)
.+.|++.++|+.|++.|+++.++|+.....+..+-+.+|+.. +.+++. - .|. ..-+.+.+++.| .+
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~-p~~~~~a~~~l~~~~~~e~ 179 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPY-PWMALKNAIELGVYDVAAC 179 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcCCCCCCC-hHHHHHHHHHcCCCCCcce
Confidence 467999999999999999999999999998888877766531 233322 1 231 122344444443 48
Q ss_pred EEEcCCccCHHHHhhCCe---eEEeCCCC------------------------cHHHHhhcCEEEecCCcchHHHHHH
Q 001837 590 AMIGDGINDAPALATADI---GISMGISG------------------------SALATETGQVILMSNDIRKVPEAIR 640 (1007)
Q Consensus 590 amVGDG~NDa~ALk~ADV---GIAmg~~g------------------------s~~A~~aADiVLl~~~l~~I~~lI~ 640 (1007)
+||||..+|..|-++|++ |+.-|... .......+|+++ +++..+..++.
T Consensus 180 l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~vi--~~~~~l~~~l~ 255 (267)
T PRK13478 180 VKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRAAGAHYVI--DTIADLPAVIA 255 (267)
T ss_pred EEEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHHcCCCeeh--hhHHHHHHHHH
Confidence 999999999999999996 44444210 122334578888 77888877663
No 98
>PLN02382 probable sucrose-phosphatase
Probab=96.93 E-value=0.0065 Score=71.55 Aligned_cols=64 Identities=20% Similarity=0.275 Sum_probs=45.7
Q ss_pred HHHHHHHHhhC----C----eEEEEcCCccCHHHHhhCC-eeEEeCCCCcHHHHhh--------cCEEEe-cCCcchHHH
Q 001837 576 KAKIINQFKQE----G----KTAMIGDGINDAPALATAD-IGISMGISGSALATET--------GQVILM-SNDIRKVPE 637 (1007)
Q Consensus 576 K~~iV~~Lq~~----G----~VamVGDG~NDa~ALk~AD-VGIAmg~~gs~~A~~a--------ADiVLl-~~~l~~I~~ 637 (1007)
|...|+.|.+. | .|+++||+.||.+||+.++ .||+|+ ++.+..++. ++++.. +.+-..|.+
T Consensus 176 Kg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~-NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~ 254 (413)
T PLN02382 176 KGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVS-NAQEELLQWYAENAKDNPKIIHATERCAAGIIQ 254 (413)
T ss_pred HHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEc-CCcHHHHHHHHhhccCCCcEEEcCCCCccHHHH
Confidence 77777777554 4 5899999999999999999 699999 677666653 255544 234455655
Q ss_pred HHH
Q 001837 638 AIR 640 (1007)
Q Consensus 638 lI~ 640 (1007)
+|.
T Consensus 255 al~ 257 (413)
T PLN02382 255 AIG 257 (413)
T ss_pred HHH
Confidence 553
No 99
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=96.91 E-value=0.004 Score=74.42 Aligned_cols=117 Identities=11% Similarity=0.129 Sum_probs=82.2
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc--ceEEe-c-cCHhHHHHH-HHHHhhCC--eEEEEcCC
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL--NVVHS-E-LLPEDKAKI-INQFKQEG--KTAMIGDG 595 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~--~~V~a-r-~sPeqK~~i-V~~Lq~~G--~VamVGDG 595 (1007)
++.||+.+.+++|++.|+++.++|+-....+..+.+.+|+.. +.+++ . ..+..|..+ ...+++.+ .++||||.
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v~~~~kP~~~~~al~~l~~~~~v~VGDs 409 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQINSLNKSDLVKSILNKYDIKEAAVVGDR 409 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCCCCCCCcHHHHHHHHhcCcceEEEEeCC
Confidence 578999999999999999999999999999999999999862 12222 1 111112223 33344444 69999999
Q ss_pred ccCHHHHhhCCe-eEEeCC-CCcHHHHhhcCEEEecCCcchHHHHHHH
Q 001837 596 INDAPALATADI-GISMGI-SGSALATETGQVILMSNDIRKVPEAIRL 641 (1007)
Q Consensus 596 ~NDa~ALk~ADV-GIAmg~-~gs~~A~~aADiVLl~~~l~~I~~lI~~ 641 (1007)
.+|..|-+.|++ .|.+.. .........+|+++ +++..+..++..
T Consensus 410 ~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~~ 455 (459)
T PRK06698 410 LSDINAAKDNGLIAIGCNFDFAQEDELAQADIVI--DDLLELKGILST 455 (459)
T ss_pred HHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEe--CCHHHHHHHHHH
Confidence 999999999997 344431 12222234588887 678877776643
No 100
>PRK11587 putative phosphatase; Provisional
Probab=96.89 E-value=0.0054 Score=65.60 Aligned_cols=110 Identities=17% Similarity=0.210 Sum_probs=74.4
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc-eEEec-----cCHhHHHHHHHHHhhCC----eEEEE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN-VVHSE-----LLPEDKAKIINQFKQEG----KTAMI 592 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~-~V~ar-----~sPeqK~~iV~~Lq~~G----~VamV 592 (1007)
++.|++.++++.|++.|+++.++|+.....+...-+..|+... .+.+. ..|. -.-+...+++.| .++||
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~~~i~~~~~~~~~KP~-p~~~~~~~~~~g~~p~~~l~i 161 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAPEVFVTAERVKRGKPE-PDAYLLGAQLLGLAPQECVVV 161 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCccEEEEHHHhcCCCCC-cHHHHHHHHHcCCCcccEEEE
Confidence 4789999999999999999999999887777777777887422 22221 1232 122333444444 59999
Q ss_pred cCCccCHHHHhhCCee-EEeCCCCcHHHHhhcCEEEecCCcchH
Q 001837 593 GDGINDAPALATADIG-ISMGISGSALATETGQVILMSNDIRKV 635 (1007)
Q Consensus 593 GDG~NDa~ALk~ADVG-IAmg~~gs~~A~~aADiVLl~~~l~~I 635 (1007)
||..+|..|-++|++- |++...........+|+++ +++..+
T Consensus 162 gDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~--~~~~el 203 (218)
T PRK11587 162 EDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVL--HSLEQL 203 (218)
T ss_pred ecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEe--cchhhe
Confidence 9999999999999983 5554222223344678776 455544
No 101
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=96.79 E-value=0.0091 Score=58.49 Aligned_cols=102 Identities=16% Similarity=0.226 Sum_probs=70.7
Q ss_pred EEEEECCEEEEEEEe-----cCcccccHHHHHHHHHHCCCeEEEEcCCC--------HHHHHHHHHHhCCCcceEEec--
Q 001837 506 GYIFSGASPVGIFCL-----SDACRTGAAEAVNQLKSLGIRTAMLTGDN--------QSAAMQAQEQLGNALNVVHSE-- 570 (1007)
Q Consensus 506 i~v~~d~~~lGli~l-----~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~--------~~tA~~vA~~lGI~~~~V~ar-- 570 (1007)
+.+..|+++..-... +-.+.|++.+++++|++.|+++.++|+.. ......+.+.+|+....++..
T Consensus 3 ~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 82 (132)
T TIGR01662 3 VVLDLDGTLTDDVPYVDDEDERILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDVLYACPH 82 (132)
T ss_pred EEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEEEEECCC
Confidence 345566666632111 23678999999999999999999999988 777888999999863333221
Q ss_pred -cCH--hHHHHHHHHHh-hCC-eEEEEcC-CccCHHHHhhCCe
Q 001837 571 -LLP--EDKAKIINQFK-QEG-KTAMIGD-GINDAPALATADI 607 (1007)
Q Consensus 571 -~sP--eqK~~iV~~Lq-~~G-~VamVGD-G~NDa~ALk~ADV 607 (1007)
..| +-=..+++.++ -.. .++|||| -.+|..+.+++++
T Consensus 83 ~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi 125 (132)
T TIGR01662 83 CRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGL 125 (132)
T ss_pred CCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCC
Confidence 233 22223444442 222 6999999 5999999999886
No 102
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=96.77 E-value=0.0098 Score=62.62 Aligned_cols=116 Identities=21% Similarity=0.351 Sum_probs=91.0
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc-------------------------------------
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN------------------------------------- 565 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~------------------------------------- 565 (1007)
.+-|++.++++.|++. ...+++|--...-++++|..+|++..
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 3568999999999876 55666777778889999999998532
Q ss_pred -----eEEeccCHhHHHHHHHHHh---------------hC-C---eEEEEcCCccCHHHHhhCC----eeEEeCCCCcH
Q 001837 566 -----VVHSELLPEDKAKIINQFK---------------QE-G---KTAMIGDGINDAPALATAD----IGISMGISGSA 617 (1007)
Q Consensus 566 -----~V~ar~sPeqK~~iV~~Lq---------------~~-G---~VamVGDG~NDa~ALk~AD----VGIAmg~~gs~ 617 (1007)
.+|+|+.|.+-.+|+...| +. + ..+.|||.+.|..||+.+. +.||+ +|.+
T Consensus 162 fe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaF--NGNe 239 (315)
T COG4030 162 FEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAF--NGNE 239 (315)
T ss_pred HHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEe--cCCc
Confidence 5788988876555544444 33 2 3689999999999999984 55666 8899
Q ss_pred HHHhhcCEEEecCCcchHHHHHHH
Q 001837 618 LATETGQVILMSNDIRKVPEAIRL 641 (1007)
Q Consensus 618 ~A~~aADiVLl~~~l~~I~~lI~~ 641 (1007)
-|..-||+.+.+++...+..+|.+
T Consensus 240 Yal~eAdVAvisp~~~a~~pviel 263 (315)
T COG4030 240 YALKEADVAVISPTAMAEAPVIEL 263 (315)
T ss_pred ccccccceEEeccchhhhhHHHHH
Confidence 999999999999999988888765
No 103
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=96.75 E-value=0.009 Score=66.41 Aligned_cols=56 Identities=14% Similarity=0.030 Sum_probs=45.2
Q ss_pred EEEEEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCC
Q 001837 505 IGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNA 563 (1007)
Q Consensus 505 ~i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~ 563 (1007)
.++...|++++- -.+..-+.++++|++|++.||.+++.||-.......+.+++|+.
T Consensus 3 LIftDLDGTLLd---~~~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~ 58 (302)
T PRK12702 3 LVLSSLDGSLLD---LEFNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLE 58 (302)
T ss_pred EEEEeCCCCCcC---CCCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 445556666653 23446677999999999999999999999999999999999864
No 104
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=96.73 E-value=0.0042 Score=65.32 Aligned_cols=85 Identities=20% Similarity=0.178 Sum_probs=63.5
Q ss_pred cCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc--eEE------eccCHhHHHHHHHHHhhCC-eEEE
Q 001837 521 SDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN--VVH------SELLPEDKAKIINQFKQEG-KTAM 591 (1007)
Q Consensus 521 ~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~--~V~------ar~sPeqK~~iV~~Lq~~G-~Vam 591 (1007)
.+++.+++.++++.|++.|+++.++||-....+..+.+.+|+..- .++ ..-.|+--..+++.+.-.. .++|
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~i~ 183 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMEDCPPKPNPEPLILAAKALGVEACHAAM 183 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecCCCCCcCHHHHHHHHHHhCcCcccEEE
Confidence 345677789999999999999999999999999999999998621 111 1223444344555544333 6999
Q ss_pred EcCCccCHHHHhhC
Q 001837 592 IGDGINDAPALATA 605 (1007)
Q Consensus 592 VGDG~NDa~ALk~A 605 (1007)
|||+.+|+.|-++|
T Consensus 184 vGD~~~Di~aA~~a 197 (197)
T TIGR01548 184 VGDTVDDIITGRKA 197 (197)
T ss_pred EeCCHHHHHHHHhC
Confidence 99999999987765
No 105
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=96.67 E-value=0.01 Score=68.64 Aligned_cols=111 Identities=16% Similarity=0.188 Sum_probs=78.0
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc--ceEEec-----cCH--hHHHHHHHHHhhCC-eEEEE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL--NVVHSE-----LLP--EDKAKIINQFKQEG-KTAMI 592 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~--~~V~ar-----~sP--eqK~~iV~~Lq~~G-~VamV 592 (1007)
.+.||+.++++.|++.|+++.++|+-....+..+-+.+||.. +.+++. -.| +-=...++.+.-.. .++||
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl~I 295 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCIVF 295 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCCcccEEEE
Confidence 467999999999999999999999999999999999999863 123221 123 22233344443333 69999
Q ss_pred cCCccCHHHHhhCCee-EEeCCCCcH-HHHhhcCEEEecCCcchHH
Q 001837 593 GDGINDAPALATADIG-ISMGISGSA-LATETGQVILMSNDIRKVP 636 (1007)
Q Consensus 593 GDG~NDa~ALk~ADVG-IAmg~~gs~-~A~~aADiVLl~~~l~~I~ 636 (1007)
||..+|+.|-++|++- |++. .+.. .....+|+++ +++..|.
T Consensus 296 GDS~~DIeAAk~AGm~~IgV~-~~~~~~~l~~Ad~iI--~s~~EL~ 338 (381)
T PLN02575 296 GNSNQTVEAAHDARMKCVAVA-SKHPIYELGAADLVV--RRLDELS 338 (381)
T ss_pred cCCHHHHHHHHHcCCEEEEEC-CCCChhHhcCCCEEE--CCHHHHH
Confidence 9999999999999973 4443 2222 2223588877 6666653
No 106
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=96.63 E-value=0.0072 Score=64.35 Aligned_cols=89 Identities=19% Similarity=0.300 Sum_probs=66.3
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc--ceEEe-----ccCHhHHHHHHHHHhhCC----eEEE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL--NVVHS-----ELLPEDKAKIINQFKQEG----KTAM 591 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~--~~V~a-----r~sPeqK~~iV~~Lq~~G----~Vam 591 (1007)
++.|++.+++++|++.|++++++|+-+...+....+.+|+.. +.++. +..|... .+...+++.| .++|
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~-~~~~~~~~~~~~~~~~~~ 172 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEEGVEKPHPK-IFYAALKRLGVKPEEAVM 172 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccCCCCCCCHH-HHHHHHHHcCCChhhEEE
Confidence 578999999999999999999999998888888889999862 12222 2234222 2334444444 5999
Q ss_pred EcCCc-cCHHHHhhCCe-eEEeC
Q 001837 592 IGDGI-NDAPALATADI-GISMG 612 (1007)
Q Consensus 592 VGDG~-NDa~ALk~ADV-GIAmg 612 (1007)
|||.. +|..+-++|++ .|.+.
T Consensus 173 igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 173 VGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred ECCChHHHHHHHHHCCCEEEEEC
Confidence 99998 99999999987 45444
No 107
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=96.63 E-value=0.009 Score=64.55 Aligned_cols=52 Identities=19% Similarity=0.211 Sum_probs=42.5
Q ss_pred EEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCC
Q 001837 508 IFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNA 563 (1007)
Q Consensus 508 v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~ 563 (1007)
+-.|++++- .+..-++++++|++|++.|+++++.||-....+..+.+++|+.
T Consensus 4 ~DlDGTLl~----~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 4 TDLDGTLLP----PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred EeCCCCCcC----CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 334555543 3556668999999999999999999999999999999999963
No 108
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=96.54 E-value=0.012 Score=62.81 Aligned_cols=90 Identities=19% Similarity=0.110 Sum_probs=70.6
Q ss_pred cccccHHHHHH-HHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc--ceEEec-------------cCHhHHHHHHHHHhhC
Q 001837 523 ACRTGAAEAVN-QLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL--NVVHSE-------------LLPEDKAKIINQFKQE 586 (1007)
Q Consensus 523 ~lR~~a~eaI~-~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~--~~V~ar-------------~sPeqK~~iV~~Lq~~ 586 (1007)
.++|++.++|+ .+++.|++++++|+-....+..+|+..++.. ..+..+ +.-++|+.-++..-..
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~~i~t~le~~~gg~~~g~~c~g~~Kv~rl~~~~~~ 173 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLNLIASQIERGNGGWVLPLRCLGHEKVAQLEQKIGS 173 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCcEEEEEeEEeCCceEcCccCCChHHHHHHHHHhCC
Confidence 46899999996 7899999999999999999999999865421 112111 3457899877755322
Q ss_pred C--eEEEEcCCccCHHHHhhCCeeEEeC
Q 001837 587 G--KTAMIGDGINDAPALATADIGISMG 612 (1007)
Q Consensus 587 G--~VamVGDG~NDa~ALk~ADVGIAmg 612 (1007)
. ..-+=||..||.|+|+.||-.+++.
T Consensus 174 ~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 174 PLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred ChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 2 4568899999999999999999985
No 109
>PRK11590 hypothetical protein; Provisional
Probab=96.53 E-value=0.015 Score=62.08 Aligned_cols=90 Identities=17% Similarity=0.067 Sum_probs=71.2
Q ss_pred cccccHHHHH-HHHHHCCCeEEEEcCCCHHHHHHHHHHhCC--CcceEEec-------------cCHhHHHHHHHHHhh-
Q 001837 523 ACRTGAAEAV-NQLKSLGIRTAMLTGDNQSAAMQAQEQLGN--ALNVVHSE-------------LLPEDKAKIINQFKQ- 585 (1007)
Q Consensus 523 ~lR~~a~eaI-~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI--~~~~V~ar-------------~sPeqK~~iV~~Lq~- 585 (1007)
.++|++.+.| +.+++.|++++++|+-....+..+++.+|+ ....+..+ +.-++|+.-++..-.
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~~~i~t~l~~~~tg~~~g~~c~g~~K~~~l~~~~~~ 174 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRVNLIASQMQRRYGGWVLTLRCLGHEKVAQLERKIGT 174 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccCceEEEEEEEEEccEECCccCCChHHHHHHHHHhCC
Confidence 4589999999 578899999999999999999999999995 11222111 345889988775532
Q ss_pred CC-eEEEEcCCccCHHHHhhCCeeEEeC
Q 001837 586 EG-KTAMIGDGINDAPALATADIGISMG 612 (1007)
Q Consensus 586 ~G-~VamVGDG~NDa~ALk~ADVGIAmg 612 (1007)
.. ..-+=||..||.|+|+.|+-.++++
T Consensus 175 ~~~~~~aY~Ds~~D~pmL~~a~~~~~vn 202 (211)
T PRK11590 175 PLRLYSGYSDSKQDNPLLYFCQHRWRVT 202 (211)
T ss_pred CcceEEEecCCcccHHHHHhCCCCEEEC
Confidence 22 4568899999999999999999985
No 110
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=96.52 E-value=0.014 Score=60.40 Aligned_cols=128 Identities=16% Similarity=0.186 Sum_probs=76.9
Q ss_pred EEEEEECCEEEE---EEEe--cCcccccHHHHHHHHHHCCCeEEEEcCCCH---------------HHHHHHHHHhCCCc
Q 001837 505 IGYIFSGASPVG---IFCL--SDACRTGAAEAVNQLKSLGIRTAMLTGDNQ---------------SAAMQAQEQLGNAL 564 (1007)
Q Consensus 505 ~i~v~~d~~~lG---li~l--~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~---------------~tA~~vA~~lGI~~ 564 (1007)
.+++-+|++++. ++.= .-.+.|++.++|++|+++|+++.++|.-+. .....+..+.|+..
T Consensus 3 ~~~~D~Dgtl~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 82 (176)
T TIGR00213 3 AIFLDRDGTINIDHGYVHEIDNFEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDL 82 (176)
T ss_pred EEEEeCCCCEeCCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCc
Confidence 455666776651 1000 113578999999999999999999997663 11223444555543
Q ss_pred ceEEe----------------ccCHhHHHHHHHHHhhCC----eEEEEcCCccCHHHHhhCCee--EEeCCCCcH---HH
Q 001837 565 NVVHS----------------ELLPEDKAKIINQFKQEG----KTAMIGDGINDAPALATADIG--ISMGISGSA---LA 619 (1007)
Q Consensus 565 ~~V~a----------------r~sPeqK~~iV~~Lq~~G----~VamVGDG~NDa~ALk~ADVG--IAmg~~gs~---~A 619 (1007)
+.++. ...|. -..+...+++.| .++||||...|..|-++|++. |.+. .|.. ..
T Consensus 83 ~~i~~~~~~~~~~~~~~~~~~~~KP~-p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~-~g~~~~~~~ 160 (176)
T TIGR00213 83 DGIYYCPHHPEGVEEFRQVCDCRKPK-PGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVR-TGKPITPEA 160 (176)
T ss_pred cEEEECCCCCcccccccCCCCCCCCC-HHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEe-cCCcccccc
Confidence 34432 11232 122333444444 599999999999999999984 3433 3322 11
Q ss_pred HhhcCEEEecCCcchHH
Q 001837 620 TETGQVILMSNDIRKVP 636 (1007)
Q Consensus 620 ~~aADiVLl~~~l~~I~ 636 (1007)
...+|+++ +++..|+
T Consensus 161 ~~~ad~~i--~~~~el~ 175 (176)
T TIGR00213 161 ENIADWVL--NSLADLP 175 (176)
T ss_pred cccCCEEe--ccHHHhh
Confidence 23488888 5666553
No 111
>PLN02957 copper, zinc superoxide dismutase
Probab=96.49 E-value=0.0096 Score=64.92 Aligned_cols=68 Identities=31% Similarity=0.381 Sum_probs=58.9
Q ss_pred eEEEEEecCCCCchHHHHHHHHHhCCCCeeEEEEecCCCeEEEEEcCCcccHHHHHHHhhhccccccccccc
Q 001837 10 QKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARFEANVRAYG 81 (1007)
Q Consensus 10 ~~~~l~V~Gm~C~~Ca~~IE~~L~~l~GV~~v~Vn~~t~tv~V~~D~~~~s~~~I~~aL~~aGy~as~~~~g 81 (1007)
.++.|.+ +|+|++|+..|++.|.+++||..+.+++..+++.|.|+ ....++.+.+++.||.+.+...+
T Consensus 6 ~~~~~~V-gMsC~~Ca~~Iek~L~~~~GV~~v~vn~~~~~v~V~~~---~~~~~I~~aIe~~Gy~a~~~~~~ 73 (238)
T PLN02957 6 LLTEFMV-DMKCEGCVAAVKNKLETLEGVKAVEVDLSNQVVRVLGS---SPVKAMTAALEQTGRKARLIGQG 73 (238)
T ss_pred EEEEEEE-CccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEec---CCHHHHHHHHHHcCCcEEEecCC
Confidence 3467888 79999999999999999999999999999999999984 35788999999999987665543
No 112
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=96.45 E-value=0.014 Score=60.24 Aligned_cols=102 Identities=15% Similarity=0.167 Sum_probs=73.2
Q ss_pred CCCeEEEEEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCC-HHHHHHHHHHhCCCcceEEeccCHhHHHHH
Q 001837 501 KGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDN-QSAAMQAQEQLGNALNVVHSELLPEDKAKI 579 (1007)
Q Consensus 501 ~g~~~i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~-~~tA~~vA~~lGI~~~~V~ar~sPeqK~~i 579 (1007)
.+...+.+..|+++.-. =...+.|++.+++++|++.|++++++|+.+ ...+..+.+.+|+. .++....|... .+
T Consensus 23 ~~v~~vv~D~Dgtl~~~--~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~--~~~~~~KP~p~-~~ 97 (170)
T TIGR01668 23 VGIKGVVLDKDNTLVYP--DHNEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIP--VLPHAVKPPGC-AF 97 (170)
T ss_pred CCCCEEEEecCCccccC--CCCCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCE--EEcCCCCCChH-HH
Confidence 34455556666554311 123578999999999999999999999988 67788888899986 44433455322 33
Q ss_pred HHHHhhCC----eEEEEcCCc-cCHHHHhhCCe
Q 001837 580 INQFKQEG----KTAMIGDGI-NDAPALATADI 607 (1007)
Q Consensus 580 V~~Lq~~G----~VamVGDG~-NDa~ALk~ADV 607 (1007)
...+++.| .++||||.. .|..+-++|++
T Consensus 98 ~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi 130 (170)
T TIGR01668 98 RRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGS 130 (170)
T ss_pred HHHHHHcCCCHHHEEEECCcchHHHHHHHHcCC
Confidence 34445444 599999998 79999999997
No 113
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=96.43 E-value=0.012 Score=65.98 Aligned_cols=89 Identities=12% Similarity=-0.000 Sum_probs=72.3
Q ss_pred ecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc-c--eEEe--------------ccCHhHHHHHHHH
Q 001837 520 LSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL-N--VVHS--------------ELLPEDKAKIINQ 582 (1007)
Q Consensus 520 l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~-~--~V~a--------------r~sPeqK~~iV~~ 582 (1007)
..+++.+++.++|++|++.|++++++||.....+..+.+.+|+.. . .+.+ +-.|+-+...++.
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~ 263 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWE 263 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHH
Confidence 567899999999999999999999999999999999999988873 1 1111 3346677777776
Q ss_pred HhhC--CeEEEEcCCccCHHHHhhCCee
Q 001837 583 FKQE--GKTAMIGDGINDAPALATADIG 608 (1007)
Q Consensus 583 Lq~~--G~VamVGDG~NDa~ALk~ADVG 608 (1007)
+-.. ..++||||..+|+.+-++|+|-
T Consensus 264 ~~~~~~~~~~~vgD~~~d~~~a~~~Gi~ 291 (300)
T PHA02530 264 KIAPKYDVLLAVDDRDQVVDMWRRIGLE 291 (300)
T ss_pred HhccCceEEEEEcCcHHHHHHHHHhCCe
Confidence 5442 3799999999999999999985
No 114
>PRK10671 copA copper exporting ATPase; Provisional
Probab=96.42 E-value=0.0055 Score=78.55 Aligned_cols=63 Identities=21% Similarity=0.343 Sum_probs=54.5
Q ss_pred eEEEEEecCCCCchHHHHHHHHHhCCCCeeEEEEecCCCeEEEEEcCCcccHHHHHHHhhhccccccc
Q 001837 10 QKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARFEANV 77 (1007)
Q Consensus 10 ~~~~l~V~Gm~C~~Ca~~IE~~L~~l~GV~~v~Vn~~t~tv~V~~D~~~~s~~~I~~aL~~aGy~as~ 77 (1007)
+++++.|+||+|++|+..|+++|++++||.++.+++. +..+..+ .+.+++.+.+++.||++..
T Consensus 3 ~~~~l~V~gmtC~~C~~~i~~al~~~~gv~~v~v~~~--~~~v~~~---~~~~~i~~~i~~~Gy~~~~ 65 (834)
T PRK10671 3 QTIDLTLDGLSCGHCVKRVKESLEQRPDVEQADVSIT--EAHVTGT---ASAEALIETIKQAGYDASV 65 (834)
T ss_pred eEEEEEECCcccHHHHHHHHHHHhcCCCcceEEEeee--EEEEEec---CCHHHHHHHHHhcCCcccc
Confidence 4579999999999999999999999999999999995 4455543 3678999999999998765
No 115
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=96.38 E-value=0.0092 Score=62.62 Aligned_cols=85 Identities=14% Similarity=0.124 Sum_probs=64.0
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc--ceEEe-----ccCHhHHHHHHHHHhhCC----eEEE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL--NVVHS-----ELLPEDKAKIINQFKQEG----KTAM 591 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~--~~V~a-----r~sPeqK~~iV~~Lq~~G----~Vam 591 (1007)
++.|++.+++++|++.|+++.++|+-+......+.+.+|+.. +.+++ ...|.. .-+...+++.| .++|
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~-~~~~~~~~~~~~~p~~~~~ 170 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAVRAYKPAP-QVYQLALEALGVPPDEVLF 170 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhcCCCCCCH-HHHHHHHHHhCCChhhEEE
Confidence 578999999999999999999999999998999999999852 23332 123332 22233333333 5999
Q ss_pred EcCCccCHHHHhhCCee
Q 001837 592 IGDGINDAPALATADIG 608 (1007)
Q Consensus 592 VGDG~NDa~ALk~ADVG 608 (1007)
|||+.+|..+-++|++-
T Consensus 171 vgD~~~Di~~A~~~G~~ 187 (198)
T TIGR01428 171 VASNPWDLGGAKKFGFK 187 (198)
T ss_pred EeCCHHHHHHHHHCCCc
Confidence 99999999999998874
No 116
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=96.35 E-value=0.015 Score=60.39 Aligned_cols=93 Identities=9% Similarity=0.005 Sum_probs=68.1
Q ss_pred EEecCcccccHHHHHHHHHHCCCeEEEEcCC-CHHHHHHHHHHhCCC---------c--c-eEEeccCHhHH--HHHHHH
Q 001837 518 FCLSDACRTGAAEAVNQLKSLGIRTAMLTGD-NQSAAMQAQEQLGNA---------L--N-VVHSELLPEDK--AKIINQ 582 (1007)
Q Consensus 518 i~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD-~~~tA~~vA~~lGI~---------~--~-~V~ar~sPeqK--~~iV~~ 582 (1007)
..-.-+++|++.++++.|+++|+++.++|+- ....+..+-+.+|+. . + .+.+.-.+..| ..+.+.
T Consensus 40 ~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~ 119 (174)
T TIGR01685 40 SGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQK 119 (174)
T ss_pred CCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHH
Confidence 3334467899999999999999999999975 889999999999976 2 1 33333322223 334555
Q ss_pred HhhC---C----eEEEEcCCccCHHHHhhCCeeEE
Q 001837 583 FKQE---G----KTAMIGDGINDAPALATADIGIS 610 (1007)
Q Consensus 583 Lq~~---G----~VamVGDG~NDa~ALk~ADVGIA 610 (1007)
+.+. | .++||||...|+.|-++|.+-..
T Consensus 120 ~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i 154 (174)
T TIGR01685 120 VNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSC 154 (174)
T ss_pred hhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEE
Confidence 5432 2 69999999999999999987543
No 117
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=96.32 E-value=0.012 Score=62.72 Aligned_cols=112 Identities=14% Similarity=0.129 Sum_probs=75.8
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc--ceEEec-c----CHhHHHHHHHHHhhC-C----eEE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL--NVVHSE-L----LPEDKAKIINQFKQE-G----KTA 590 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~--~~V~ar-~----sPeqK~~iV~~Lq~~-G----~Va 590 (1007)
++.|++.+++++|++. ++++++|+-....+..+.+.+|+.. +.+++. . .|+.. .+-..+++. | .++
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~~~-~~~~~~~~~~~~~~~~~v 174 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDAGIQKPDKE-IFNYALERMPKFSKEEVL 174 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCccCCCCCCHH-HHHHHHHHhcCCCchheE
Confidence 5789999999999999 9999999999999999999999852 234332 1 24322 122333333 3 599
Q ss_pred EEcCCc-cCHHHHhhCCe-eEEeCC-CCcHHHHhhcCEEEecCCcchHHHH
Q 001837 591 MIGDGI-NDAPALATADI-GISMGI-SGSALATETGQVILMSNDIRKVPEA 638 (1007)
Q Consensus 591 mVGDG~-NDa~ALk~ADV-GIAmg~-~gs~~A~~aADiVLl~~~l~~I~~l 638 (1007)
||||.. +|..+-+.+++ +|.+.. ..+......+|.++ +++..|..+
T Consensus 175 ~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~--~~~~el~~~ 223 (224)
T TIGR02254 175 MIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEI--RSLEELYEI 223 (224)
T ss_pred EECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEE--CCHHHHHhh
Confidence 999998 89999999996 344321 11212223466666 666666554
No 118
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=96.22 E-value=0.015 Score=61.41 Aligned_cols=50 Identities=16% Similarity=0.277 Sum_probs=40.4
Q ss_pred EEECCEEEEEEEecC--cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhC
Q 001837 508 IFSGASPVGIFCLSD--ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLG 561 (1007)
Q Consensus 508 v~~d~~~lGli~l~D--~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lG 561 (1007)
+..|++++. .+ ++.+.+.++|++|++.|++++++||-....+..+.+.++
T Consensus 4 ~D~DgTL~~----~~~~~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 4 FDLDGTLLD----PNAHELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred EeCcCCCcC----CCCCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 345666653 22 477899999999999999999999999999998887754
No 119
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=96.22 E-value=0.015 Score=58.42 Aligned_cols=87 Identities=20% Similarity=0.276 Sum_probs=66.6
Q ss_pred CcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCC--cceEEecc-----CH--hHHHHHHHHHhhCC-eEEE
Q 001837 522 DACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNA--LNVVHSEL-----LP--EDKAKIINQFKQEG-KTAM 591 (1007)
Q Consensus 522 D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~--~~~V~ar~-----sP--eqK~~iV~~Lq~~G-~Vam 591 (1007)
.++.|++.+.+++|++.|++++++|+-+......+.+++|+. .+.++..- .| +-=..+++.+.-.. .++|
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~~~~ 155 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEEILF 155 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGGEEE
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhhhhhhHHHHHHHHHHHcCCCcceEEE
Confidence 357899999999999999999999999999999999999987 33444321 22 22233344443333 7999
Q ss_pred EcCCccCHHHHhhCCee
Q 001837 592 IGDGINDAPALATADIG 608 (1007)
Q Consensus 592 VGDG~NDa~ALk~ADVG 608 (1007)
|||...|..+-++|++-
T Consensus 156 vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 156 VGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp EESSHHHHHHHHHTTSE
T ss_pred EeCCHHHHHHHHHcCCe
Confidence 99999999999999873
No 120
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=96.16 E-value=0.013 Score=60.42 Aligned_cols=83 Identities=18% Similarity=0.191 Sum_probs=58.9
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc--eEEe-----ccCHhHHHHHHHHHhhCC----eEEE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN--VVHS-----ELLPEDKAKIINQFKQEG----KTAM 591 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~--~V~a-----r~sPeqK~~iV~~Lq~~G----~Vam 591 (1007)
++.|++.++|+.|++.|+++.++|+... +..+.+.+|+... .++. +-.|. ...+-..+++.| .++|
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~~~~~~~~~~~kp~-p~~~~~~~~~~~~~~~~~v~ 163 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFDAIVDPAEIKKGKPD-PEIFLAAAEGLGVSPSECIG 163 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCcEEEehhhcCCCCCC-hHHHHHHHHHcCCCHHHeEE
Confidence 5789999999999999999999997432 4567788887621 2221 12232 222233444444 5999
Q ss_pred EcCCccCHHHHhhCCee
Q 001837 592 IGDGINDAPALATADIG 608 (1007)
Q Consensus 592 VGDG~NDa~ALk~ADVG 608 (1007)
|||..+|..+-++|++-
T Consensus 164 vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 164 IEDAQAGIEAIKAAGMF 180 (185)
T ss_pred EecCHHHHHHHHHcCCE
Confidence 99999999999999873
No 121
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=96.15 E-value=0.024 Score=69.53 Aligned_cols=56 Identities=14% Similarity=0.091 Sum_probs=43.9
Q ss_pred eEEEEEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCC
Q 001837 504 TIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGN 562 (1007)
Q Consensus 504 ~~i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI 562 (1007)
..++...|++++.- .+..-+.++++|++|+++|+.+++.||.....+..+++++|+
T Consensus 417 KLIfsDLDGTLLd~---d~~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl 472 (694)
T PRK14502 417 KIVYTDLDGTLLNP---LTYSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGI 472 (694)
T ss_pred eEEEEECcCCCcCC---CCccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 45556667777532 112335689999999999999999999999999999999886
No 122
>PRK09449 dUMP phosphatase; Provisional
Probab=96.12 E-value=0.022 Score=60.88 Aligned_cols=114 Identities=17% Similarity=0.198 Sum_probs=75.5
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc--ceE-Eecc----CHh--HHHHHHHHHhhC-C-eEEE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL--NVV-HSEL----LPE--DKAKIINQFKQE-G-KTAM 591 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~--~~V-~ar~----sPe--qK~~iV~~Lq~~-G-~Vam 591 (1007)
++.|++.+++++|+ .|+++.++|......+...-+.+|+.. +.+ .+.- .|. -=..+++.+.-. . .++|
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~~ 173 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRSRVLM 173 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECccCCCCCCHHHHHHHHHHcCCCCcccEEE
Confidence 46899999999999 689999999998888888888888752 233 3322 232 222233333321 2 5999
Q ss_pred EcCCc-cCHHHHhhCCee-EEeCCCCcH-HHHhhcCEEEecCCcchHHHHH
Q 001837 592 IGDGI-NDAPALATADIG-ISMGISGSA-LATETGQVILMSNDIRKVPEAI 639 (1007)
Q Consensus 592 VGDG~-NDa~ALk~ADVG-IAmg~~gs~-~A~~aADiVLl~~~l~~I~~lI 639 (1007)
|||.. +|..+-++|++- |.+...+.. .....+|+++ +++..|..++
T Consensus 174 vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i--~~~~el~~~l 222 (224)
T PRK09449 174 VGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQV--SSLSELEQLL 222 (224)
T ss_pred EcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEE--CCHHHHHHHH
Confidence 99998 799999999984 444311211 1112467777 6677776654
No 123
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=96.09 E-value=0.014 Score=62.84 Aligned_cols=86 Identities=20% Similarity=0.204 Sum_probs=64.0
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc--ceEE-eccCHhHH--HHHHH-HHhhCC----eEEEE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL--NVVH-SELLPEDK--AKIIN-QFKQEG----KTAMI 592 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~--~~V~-ar~sPeqK--~~iV~-~Lq~~G----~VamV 592 (1007)
.+.|++.++++.|++.|+++.++|+-....+...-+.+|+.. +.++ +.-....| ..+.+ .+++.| .++||
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l~i 172 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAERTLFI 172 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHHEEEE
Confidence 578999999999999999999999998888888888888752 1232 22111112 23333 344444 59999
Q ss_pred cCCccCHHHHhhCCee
Q 001837 593 GDGINDAPALATADIG 608 (1007)
Q Consensus 593 GDG~NDa~ALk~ADVG 608 (1007)
||..+|..|-++|++.
T Consensus 173 gDs~~di~aA~~aG~~ 188 (224)
T PRK14988 173 DDSEPILDAAAQFGIR 188 (224)
T ss_pred cCCHHHHHHHHHcCCe
Confidence 9999999999999985
No 124
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=96.08 E-value=0.025 Score=63.43 Aligned_cols=112 Identities=17% Similarity=0.205 Sum_probs=71.6
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCC---Ccc-eEEe-ccCHhHH--H-HHHHHHhhCC----eEE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGN---ALN-VVHS-ELLPEDK--A-KIINQFKQEG----KTA 590 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI---~~~-~V~a-r~sPeqK--~-~iV~~Lq~~G----~Va 590 (1007)
++.|++.+.++.|++.|+++.++|+-+......+-+..++ ... .++. ...+..| . -+...+++.| .++
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l 223 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDVPKKKPDPDIYNLAAETLGVDPSRCV 223 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccccCCCCCCHHHHHHHHHHhCcChHHEE
Confidence 5789999999999999999999999988888777665532 110 2221 1111112 1 2223333333 599
Q ss_pred EEcCCccCHHHHhhCCeeEEeCCCCc--HHHHhhcCEEEecCCcchHH
Q 001837 591 MIGDGINDAPALATADIGISMGISGS--ALATETGQVILMSNDIRKVP 636 (1007)
Q Consensus 591 mVGDG~NDa~ALk~ADVGIAmg~~gs--~~A~~aADiVLl~~~l~~I~ 636 (1007)
||||+.+|..|-++|++.......|. ......+|+++ +++..+.
T Consensus 224 ~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi--~~~~~l~ 269 (286)
T PLN02779 224 VVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVF--DCLGDVP 269 (286)
T ss_pred EEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEE--CChhhcc
Confidence 99999999999999997533221222 11224588887 5565543
No 125
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=95.90 E-value=0.028 Score=57.59 Aligned_cols=84 Identities=18% Similarity=0.192 Sum_probs=59.6
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc--ceE-Eecc----CH--hHHHHHHHHHhhCC-eEEEE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL--NVV-HSEL----LP--EDKAKIINQFKQEG-KTAMI 592 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~--~~V-~ar~----sP--eqK~~iV~~Lq~~G-~VamV 592 (1007)
++.|++.++++.|++.|+++.++|+-.... ..+..++|+.. +.+ ++.- .| +-=..+.+.+.... .++||
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~v 163 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECLFV 163 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEEEE
Confidence 578999999999999999999999988777 66666688852 233 3222 22 22223333332222 69999
Q ss_pred cCCccCHHHHhhCCe
Q 001837 593 GDGINDAPALATADI 607 (1007)
Q Consensus 593 GDG~NDa~ALk~ADV 607 (1007)
||...|..|-+++++
T Consensus 164 gD~~~di~aA~~~G~ 178 (183)
T TIGR01509 164 DDSPAGIEAAKAAGM 178 (183)
T ss_pred cCCHHHHHHHHHcCC
Confidence 999999999998887
No 126
>PLN02940 riboflavin kinase
Probab=95.86 E-value=0.023 Score=66.33 Aligned_cols=103 Identities=17% Similarity=0.175 Sum_probs=69.6
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHH-HhCCCc--ceEEec-----cCHhHHHHHHHHHhhCC----eEE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQE-QLGNAL--NVVHSE-----LLPEDKAKIINQFKQEG----KTA 590 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~-~lGI~~--~~V~ar-----~sPeqK~~iV~~Lq~~G----~Va 590 (1007)
.+.|++.+++++|++.|+++.|+|+-....+....+ ..|+.. +.+++. ..|. ...+.+.+++.| .++
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP~-p~~~~~a~~~lgv~p~~~l 171 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVEKGKPS-PDIFLEAAKRLNVEPSNCL 171 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcCCCCCC-HHHHHHHHHHcCCChhHEE
Confidence 467999999999999999999999998888877665 677742 123221 1231 123344444443 699
Q ss_pred EEcCCccCHHHHhhCCee-EEeCCCCc--HHHHhhcCEEE
Q 001837 591 MIGDGINDAPALATADIG-ISMGISGS--ALATETGQVIL 627 (1007)
Q Consensus 591 mVGDG~NDa~ALk~ADVG-IAmg~~gs--~~A~~aADiVL 627 (1007)
||||..+|..|-++|++- |.+. .+. ......+|.++
T Consensus 172 ~VGDs~~Di~aA~~aGi~~I~v~-~g~~~~~~~~~ad~~i 210 (382)
T PLN02940 172 VIEDSLPGVMAGKAAGMEVIAVP-SIPKQTHLYSSADEVI 210 (382)
T ss_pred EEeCCHHHHHHHHHcCCEEEEEC-CCCcchhhccCccEEe
Confidence 999999999999999975 4443 222 22234466665
No 127
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=95.66 E-value=0.027 Score=57.87 Aligned_cols=89 Identities=16% Similarity=0.141 Sum_probs=68.5
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhC----CCcceE----------------EeccC--HhHHHHHH
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLG----NALNVV----------------HSELL--PEDKAKII 580 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lG----I~~~~V----------------~ar~s--PeqK~~iV 580 (1007)
.++|+.++.++.+++.+++++++|+--..-...+-++++ |....+ +-.-+ --+|...|
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK~~vI 152 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDKSSVI 152 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccccCCCcchhH
Confidence 478999999999999999999998877666666666665 321111 11111 24799999
Q ss_pred HHHhhCC-eEEEEcCCccCHHHHhhCCeeEEe
Q 001837 581 NQFKQEG-KTAMIGDGINDAPALATADIGISM 611 (1007)
Q Consensus 581 ~~Lq~~G-~VamVGDG~NDa~ALk~ADVGIAm 611 (1007)
+.|++.. .+.|+|||+.|..|-+.+|+=.|-
T Consensus 153 ~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK 184 (220)
T COG4359 153 HELSEPNESIFYCGDSVSDLSAAKLSDLLFAK 184 (220)
T ss_pred HHhhcCCceEEEecCCcccccHhhhhhhHhhH
Confidence 9999987 899999999999998988886653
No 128
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=95.66 E-value=0.022 Score=58.69 Aligned_cols=84 Identities=15% Similarity=0.183 Sum_probs=61.1
Q ss_pred CcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc--ceEEec-----cCHhHHHHHHHHHhhCC----eEE
Q 001837 522 DACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL--NVVHSE-----LLPEDKAKIINQFKQEG----KTA 590 (1007)
Q Consensus 522 D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~--~~V~ar-----~sPeqK~~iV~~Lq~~G----~Va 590 (1007)
-++.|++.++++.|++.|+++.++|+- ..+..+-+.+|+.. +.+++. ..|... -+.+.+++.| .++
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~~~~~kp~~~-~~~~~~~~~~~~~~~~v 163 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADEVKEGKPHPE-TFLLAAELLGVSPNECV 163 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhhCCCCCCChH-HHHHHHHHcCCCHHHeE
Confidence 368999999999999999999999987 55777788888751 233321 223221 2233444444 599
Q ss_pred EEcCCccCHHHHhhCCee
Q 001837 591 MIGDGINDAPALATADIG 608 (1007)
Q Consensus 591 mVGDG~NDa~ALk~ADVG 608 (1007)
||||..+|..+-++|++-
T Consensus 164 ~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 164 VFEDALAGVQAARAAGMF 181 (185)
T ss_pred EEeCcHhhHHHHHHCCCe
Confidence 999999999999999874
No 129
>KOG4656 consensus Copper chaperone for superoxide dismutase [Inorganic ion transport and metabolism]
Probab=95.62 E-value=0.021 Score=59.14 Aligned_cols=68 Identities=25% Similarity=0.368 Sum_probs=58.7
Q ss_pred EEEEEecCCCCchHHHHHHHHHhCCCCeeEEEEecCCCeEEEEEcCCcccHHHHHHHhhhcccccccccccc
Q 001837 11 KSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARFEANVRAYGG 82 (1007)
Q Consensus 11 ~~~l~V~Gm~C~~Ca~~IE~~L~~l~GV~~v~Vn~~t~tv~V~~D~~~~s~~~I~~aL~~aGy~as~~~~g~ 82 (1007)
..+|.| .|+|.+|+..|...|+..+||+++.++...+.+.|.- ...+.++.+.|+..|.++.++..|.
T Consensus 8 ~~efaV-~M~cescvnavk~~L~~V~Gi~~vevdle~q~v~v~t---s~p~s~i~~~le~tGr~Avl~G~G~ 75 (247)
T KOG4656|consen 8 EAEFAV-QMTCESCVNAVKACLKGVPGINSVEVDLEQQIVSVET---SVPPSEIQNTLENTGRDAVLRGAGK 75 (247)
T ss_pred eEEEEE-echhHHHHHHHHHHhccCCCcceEEEEhhhcEEEEEc---cCChHHHHHHHHhhChheEEecCCc
Confidence 345555 4889999999999999999999999999999999983 3567999999999999988877654
No 130
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=95.61 E-value=0.039 Score=69.77 Aligned_cols=132 Identities=16% Similarity=0.183 Sum_probs=90.8
Q ss_pred CCeEEEEEECCEEEEEEEec--CcccccHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHhCCCc--------------
Q 001837 502 GNTIGYIFSGASPVGIFCLS--DACRTGAAEAVNQLKS-LGIRTAMLTGDNQSAAMQAQEQLGNAL-------------- 564 (1007)
Q Consensus 502 g~~~i~v~~d~~~lGli~l~--D~lR~~a~eaI~~Lr~-aGIkv~mlTGD~~~tA~~vA~~lGI~~-------------- 564 (1007)
..+.+++..|++++....-. ..+.+++.++|++|.+ .|+.|+++||............+++..
T Consensus 491 ~~rLi~~D~DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~~ 570 (726)
T PRK14501 491 SRRLLLLDYDGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGE 570 (726)
T ss_pred cceEEEEecCccccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCCc
Confidence 45778888899988642111 2366899999999999 699999999999888877655444210
Q ss_pred -------c------------------------------eEE-------------------------------------ec
Q 001837 565 -------N------------------------------VVH-------------------------------------SE 570 (1007)
Q Consensus 565 -------~------------------------------~V~-------------------------------------ar 570 (1007)
+ .+. -.
T Consensus 571 w~~~~~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~ve 650 (726)
T PRK14501 571 WQLLEPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVE 650 (726)
T ss_pred eEECCCcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEE
Confidence 0 000 11
Q ss_pred cCH--hHHHHHHHHHhhC-C--eEEEEcCCccCHHHHhhC---CeeEEeCCCCcHHHHhhcCEEEecCCcchHHHHHH
Q 001837 571 LLP--EDKAKIINQFKQE-G--KTAMIGDGINDAPALATA---DIGISMGISGSALATETGQVILMSNDIRKVPEAIR 640 (1007)
Q Consensus 571 ~sP--eqK~~iV~~Lq~~-G--~VamVGDG~NDa~ALk~A---DVGIAmg~~gs~~A~~aADiVLl~~~l~~I~~lI~ 640 (1007)
+.| -.|...++.+.+. + .|+++||+.||.+|++.+ ..+|+||. +..+|++.|. +...+..+++
T Consensus 651 V~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~-----~~s~A~~~l~--~~~eV~~~L~ 721 (726)
T PRK14501 651 VRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGP-----GESRARYRLP--SQREVRELLR 721 (726)
T ss_pred EEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEECC-----CCCcceEeCC--CHHHHHHHHH
Confidence 112 2577777776664 2 699999999999999996 58899983 2467888883 4455555543
No 131
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=95.60 E-value=0.046 Score=55.57 Aligned_cols=106 Identities=18% Similarity=0.185 Sum_probs=82.6
Q ss_pred CcCCCCCeEEEEEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEEeccCHhHH
Q 001837 497 GPKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSELLPEDK 576 (1007)
Q Consensus 497 ~~~~~g~~~i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~ar~sPeqK 576 (1007)
.+...|.+-+.+.-|.+++..= ....-|++++=+++++.+|+++.++|..++..+..+++.+|++ -++--..|-.+
T Consensus 22 ~L~~~Gikgvi~DlDNTLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~--fi~~A~KP~~~ 97 (175)
T COG2179 22 ILKAHGIKGVILDLDNTLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVP--FIYRAKKPFGR 97 (175)
T ss_pred HHHHcCCcEEEEeccCceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCc--eeecccCccHH
Confidence 3445666667777777776542 2235678999999999999999999999999999999999999 77777777654
Q ss_pred HHHHHHHhhCC----eEEEEcCC-ccCHHHHhhCCe
Q 001837 577 AKIINQFKQEG----KTAMIGDG-INDAPALATADI 607 (1007)
Q Consensus 577 ~~iV~~Lq~~G----~VamVGDG-~NDa~ALk~ADV 607 (1007)
.+-++|++.+ .|+||||- ..|+-+-..|++
T Consensus 98 -~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~ 132 (175)
T COG2179 98 -AFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGM 132 (175)
T ss_pred -HHHHHHHHcCCChhHEEEEcchhhhhhhcccccCc
Confidence 4667777765 59999998 578877666665
No 132
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=95.59 E-value=0.015 Score=58.60 Aligned_cols=89 Identities=16% Similarity=0.034 Sum_probs=67.1
Q ss_pred cCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc---ceEEec-cCHhHHHHHHHHHhhCC----eEEEE
Q 001837 521 SDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL---NVVHSE-LLPEDKAKIINQFKQEG----KTAMI 592 (1007)
Q Consensus 521 ~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~---~~V~ar-~sPeqK~~iV~~Lq~~G----~VamV 592 (1007)
.-.+||++.+.++.|+ .++++.++|.-....+..+-+.+++.. ..++++ -....|-.+++.+++.| .+.||
T Consensus 43 ~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~~~KP~~~k~l~~l~~~p~~~i~i 121 (148)
T smart00577 43 YVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVFVKGKYVKDLSLLGRDLSNVIII 121 (148)
T ss_pred EEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECccccccCCeEeecHHHcCCChhcEEEE
Confidence 3457999999999999 579999999999999999999998852 233333 22222333666666654 59999
Q ss_pred cCCccCHHHHhhCCeeEE
Q 001837 593 GDGINDAPALATADIGIS 610 (1007)
Q Consensus 593 GDG~NDa~ALk~ADVGIA 610 (1007)
||..+|..|-+++.|-|.
T Consensus 122 ~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 122 DDSPDSWPFHPENLIPIK 139 (148)
T ss_pred ECCHHHhhcCccCEEEec
Confidence 999999998777766553
No 133
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=95.55 E-value=0.051 Score=54.55 Aligned_cols=86 Identities=24% Similarity=0.353 Sum_probs=60.7
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCH---------------HHHHHHHHHhCCCcceEEe-cc-------CHhHHHHH
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQ---------------SAAMQAQEQLGNALNVVHS-EL-------LPEDKAKI 579 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~---------------~tA~~vA~~lGI~~~~V~a-r~-------sPeqK~~i 579 (1007)
++.|++.++++.|++.|+++.++|..+. ..+..+.+.+|+....+|. .. ...-+.++
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~KP~~~~ 106 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPHHPADNCSCRKPKPGL 106 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCCCCCCCCCCCCCCHHH
Confidence 4689999999999999999999998762 4556677888986322222 11 01223333
Q ss_pred HH-HHhhCC----eEEEEcCCccCHHHHhhCCee
Q 001837 580 IN-QFKQEG----KTAMIGDGINDAPALATADIG 608 (1007)
Q Consensus 580 V~-~Lq~~G----~VamVGDG~NDa~ALk~ADVG 608 (1007)
++ .+++.| .++||||...|..+-+++++-
T Consensus 107 ~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 107 ILEALKRLGVDASRSLVVGDRLRDLQAARNAGLA 140 (147)
T ss_pred HHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCC
Confidence 33 334444 599999999999999999873
No 134
>PLN02811 hydrolase
Probab=95.49 E-value=0.042 Score=58.86 Aligned_cols=86 Identities=21% Similarity=0.223 Sum_probs=57.2
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHH-HHHHHhCCCc--ceEE-ec--c------CHhHHHHHHHHHh---hC-
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAM-QAQEQLGNAL--NVVH-SE--L------LPEDKAKIINQFK---QE- 586 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~-~vA~~lGI~~--~~V~-ar--~------sPeqK~~iV~~Lq---~~- 586 (1007)
++.|++.++|+.|++.|+++.++||-...... ...+..++.. +.++ +. - .|+-=...++.+. -.
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~ 157 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPVDP 157 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCCCc
Confidence 56899999999999999999999998765333 2333334431 1232 22 1 1222234445553 11
Q ss_pred CeEEEEcCCccCHHHHhhCCee
Q 001837 587 GKTAMIGDGINDAPALATADIG 608 (1007)
Q Consensus 587 G~VamVGDG~NDa~ALk~ADVG 608 (1007)
..++||||...|+.|-++|++-
T Consensus 158 ~~~v~IgDs~~di~aA~~aG~~ 179 (220)
T PLN02811 158 GKVLVFEDAPSGVEAAKNAGMS 179 (220)
T ss_pred cceEEEeccHhhHHHHHHCCCe
Confidence 2599999999999999999973
No 135
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=95.19 E-value=0.094 Score=57.14 Aligned_cols=90 Identities=16% Similarity=0.158 Sum_probs=60.5
Q ss_pred EEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHH--HHHHHhCCCc---ceEEeccCHhHHHHHHHHHhhC---C
Q 001837 516 GIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAM--QAQEQLGNAL---NVVHSELLPEDKAKIINQFKQE---G 587 (1007)
Q Consensus 516 Gli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~--~vA~~lGI~~---~~V~ar~sPeqK~~iV~~Lq~~---G 587 (1007)
|.+.-.+.+-|++.+++++|+++|+++.++|.-....+. ...+++|+.. +.|+..- ......+.+.+++. +
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~-~~~~~~l~~~~~~~~~~~ 95 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSG-EIAVQMILESKKRFDIRN 95 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccH-HHHHHHHHhhhhhccCCC
Confidence 344456778999999999999999999999986655444 5668899874 1222211 00112233333332 2
Q ss_pred -eEEEEcCCccCHHHHhhCC
Q 001837 588 -KTAMIGDGINDAPALATAD 606 (1007)
Q Consensus 588 -~VamVGDG~NDa~ALk~AD 606 (1007)
.+.|+||+..|...+...+
T Consensus 96 ~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 96 GIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred ceEEEeCCcccchhhhcCCC
Confidence 5999999999998886544
No 136
>KOG1603 consensus Copper chaperone [Inorganic ion transport and metabolism]
Probab=95.16 E-value=0.076 Score=47.00 Aligned_cols=58 Identities=17% Similarity=0.362 Sum_probs=50.6
Q ss_pred EEEEecCCCCchHHHHHHHHHhCCCCeeEEEEecCCCeEEEEEcCCcccHHHHHHHhhhcc
Q 001837 12 SYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQAR 72 (1007)
Q Consensus 12 ~~l~V~Gm~C~~Ca~~IE~~L~~l~GV~~v~Vn~~t~tv~V~~D~~~~s~~~I~~aL~~aG 72 (1007)
.....-.|+|..|+..|++.|..+.||.++.++...++++|.-+ .++..+.+.+.+.+
T Consensus 6 ~~v~kv~~~C~gc~~kV~~~l~~~~GV~~v~id~~~~kvtV~g~---~~p~~vl~~l~k~~ 63 (73)
T KOG1603|consen 6 TVVLKVNMHCEGCARKVKRVLQKLKGVESVDIDIKKQKVTVKGN---VDPVKLLKKLKKTG 63 (73)
T ss_pred EEEEEECcccccHHHHHHHHhhccCCeEEEEecCCCCEEEEEEe---cCHHHHHHHHHhcC
Confidence 34556689999999999999999999999999999999999855 56888888888754
No 137
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=95.12 E-value=0.076 Score=54.44 Aligned_cols=89 Identities=21% Similarity=0.272 Sum_probs=62.1
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCC---------------CHHHHHHHHHHhCCCcceE-Ee-----ccC--HhHHHHH
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGD---------------NQSAAMQAQEQLGNALNVV-HS-----ELL--PEDKAKI 579 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD---------------~~~tA~~vA~~lGI~~~~V-~a-----r~s--PeqK~~i 579 (1007)
++-|++.+++++|++.|+++.++|.- ....+..+.+.+|+..+.+ ++ ... ..-|..+
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd~ii~~~~~~~~~~~~~KP~~~~ 108 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIFDDVLICPHFPDDNCDCRKPKIKL 108 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCceeEEEECCCCCCCCCCCCCCCHHH
Confidence 46789999999999999999999974 2446677888888874333 33 111 0112333
Q ss_pred HHH-HhhCC----eEEEEcCCccCHHHHhhCCee-EEe
Q 001837 580 INQ-FKQEG----KTAMIGDGINDAPALATADIG-ISM 611 (1007)
Q Consensus 580 V~~-Lq~~G----~VamVGDG~NDa~ALk~ADVG-IAm 611 (1007)
++. +++.| .+.||||+.+|..+-++|++- |.+
T Consensus 109 ~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~ 146 (161)
T TIGR01261 109 LEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQY 146 (161)
T ss_pred HHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEE
Confidence 333 33333 599999999999999999984 444
No 138
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=95.10 E-value=0.071 Score=53.39 Aligned_cols=84 Identities=20% Similarity=0.349 Sum_probs=57.7
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh-CCCcceEEeccC--HhHHHHH-HHHHhhCC---eEEEEcCC
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQL-GNALNVVHSELL--PEDKAKI-INQFKQEG---KTAMIGDG 595 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~l-GI~~~~V~ar~s--PeqK~~i-V~~Lq~~G---~VamVGDG 595 (1007)
+..+++.++++.|++.|+++.++|+-....+....+.. +-....++..-. +.-+..+ ...+++.| .++||||.
T Consensus 64 ~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~Kp~~~~~~~~~~~~~~~~~~l~iGDs 143 (154)
T TIGR01549 64 AYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKHLGDYFDLILGSDEFGAKPEPEIFLAALESLGLPPEVLHVGDN 143 (154)
T ss_pred eeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHHHHhcCcEEEecCCCCCCcCHHHHHHHHHHcCCCCCEEEEeCC
Confidence 34589999999999999999999999999988888874 211123332211 1112233 33333434 58999999
Q ss_pred ccCHHHHhhCC
Q 001837 596 INDAPALATAD 606 (1007)
Q Consensus 596 ~NDa~ALk~AD 606 (1007)
.+|..|-++|+
T Consensus 144 ~~Di~aa~~aG 154 (154)
T TIGR01549 144 LNDIEGARNAG 154 (154)
T ss_pred HHHHHHHHHcc
Confidence 99999887764
No 139
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=95.09 E-value=0.12 Score=53.26 Aligned_cols=105 Identities=11% Similarity=0.124 Sum_probs=68.1
Q ss_pred eEEEEEECCEEEEEE----EecCc-----ccccHHHHHHHHHHCCCeEEEEcCCCHH------------HHHHHHHHhCC
Q 001837 504 TIGYIFSGASPVGIF----CLSDA-----CRTGAAEAVNQLKSLGIRTAMLTGDNQS------------AAMQAQEQLGN 562 (1007)
Q Consensus 504 ~~i~v~~d~~~lGli----~l~D~-----lR~~a~eaI~~Lr~aGIkv~mlTGD~~~------------tA~~vA~~lGI 562 (1007)
..+.+..|++++-.. ...++ +-|++.+++++|+++|+++.++|.-... .+..+.+.+|+
T Consensus 14 k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl 93 (166)
T TIGR01664 14 KVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKV 93 (166)
T ss_pred cEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCC
Confidence 456677888877432 11222 4599999999999999999999975542 45677889998
Q ss_pred CcceEE-ecc----CHh--HHHHHHHHHh--hC-CeEEEEcCCc--------cCHHHHhhCCee
Q 001837 563 ALNVVH-SEL----LPE--DKAKIINQFK--QE-GKTAMIGDGI--------NDAPALATADIG 608 (1007)
Q Consensus 563 ~~~~V~-ar~----sPe--qK~~iV~~Lq--~~-G~VamVGDG~--------NDa~ALk~ADVG 608 (1007)
....+. +.- .|. -=..+++.+. -. ..++||||.. +|..|-++|++-
T Consensus 94 ~~~~ii~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~ 157 (166)
T TIGR01664 94 PIQVLAATHAGLYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLE 157 (166)
T ss_pred CEEEEEecCCCCCCCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCC
Confidence 642222 111 222 1123333333 11 2599999986 699988888764
No 140
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=94.83 E-value=0.062 Score=58.39 Aligned_cols=87 Identities=28% Similarity=0.363 Sum_probs=65.9
Q ss_pred cccccHHHHHHHH--HHCCCeEEEEcCCCHHHHHHHHHHhCCCcc--eEEec----------------------cCH-hH
Q 001837 523 ACRTGAAEAVNQL--KSLGIRTAMLTGDNQSAAMQAQEQLGNALN--VVHSE----------------------LLP-ED 575 (1007)
Q Consensus 523 ~lR~~a~eaI~~L--r~aGIkv~mlTGD~~~tA~~vA~~lGI~~~--~V~ar----------------------~sP-eq 575 (1007)
|+.|+.+++++.+ ++.|+.++++|.-|..--..+-+.-|+... .||++ +.| -=
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C~~NmC 150 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSLCPPNMC 150 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCCceEEEeCccCCCCCcCCCccc
Confidence 5678999999999 458999999999999999999999998632 22222 222 25
Q ss_pred HHHHHHHHhhC----C----eEEEEcCCccC-HHHHh--hCCeeE
Q 001837 576 KAKIINQFKQE----G----KTAMIGDGIND-APALA--TADIGI 609 (1007)
Q Consensus 576 K~~iV~~Lq~~----G----~VamVGDG~ND-a~ALk--~ADVGI 609 (1007)
|..+++.+++. | +|.+||||.|| +|+++ .+|+-.
T Consensus 151 K~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~ 195 (234)
T PF06888_consen 151 KGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVF 195 (234)
T ss_pred hHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEe
Confidence 99999988865 3 69999999999 45543 555543
No 141
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=94.80 E-value=0.074 Score=55.91 Aligned_cols=83 Identities=18% Similarity=0.236 Sum_probs=58.7
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc--ceEEe-c----cCHhHHHHHHHHHhhCC----eEEE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL--NVVHS-E----LLPEDKAKIINQFKQEG----KTAM 591 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~--~~V~a-r----~sPeqK~~iV~~Lq~~G----~Vam 591 (1007)
.+.|++.++++.|++.|+++.++|+-... ...+.+.+|+.. +.++. . ..|+. .-+...+++.| .++|
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s~~~~~~KP~~-~~~~~~~~~~~~~~~~~~~ 182 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTSYEVGAEKPDP-KIFQEALERAGISPEEALH 182 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEeecccCCCCCCH-HHHHHHHHHcCCChhHEEE
Confidence 56799999999999999999999976554 467778888742 12322 1 12322 22333444444 5999
Q ss_pred EcCCc-cCHHHHhhCCe
Q 001837 592 IGDGI-NDAPALATADI 607 (1007)
Q Consensus 592 VGDG~-NDa~ALk~ADV 607 (1007)
|||.. +|..+-++|++
T Consensus 183 IgD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 183 IGDSLRNDYQGARAAGW 199 (203)
T ss_pred ECCCchHHHHHHHHcCC
Confidence 99997 89999888876
No 142
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=94.76 E-value=0.24 Score=50.52 Aligned_cols=87 Identities=23% Similarity=0.202 Sum_probs=64.2
Q ss_pred cCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHH---HHHHH---hC--CCcceEE--------------eccCHhH-HH
Q 001837 521 SDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAM---QAQEQ---LG--NALNVVH--------------SELLPED-KA 577 (1007)
Q Consensus 521 ~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~---~vA~~---lG--I~~~~V~--------------ar~sPeq-K~ 577 (1007)
+|.+.|+++++++++++.|++++++||-....+. ....+ .| +....++ ..-.|+. |.
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~~~~~~e~i~~~~~~~K~ 104 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSPDRLFAALHREVISKKPEVFKI 104 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcCCcchhhhhcccccCCHHHHHH
Confidence 3677899999999999999999999999988874 44445 23 4311111 1223544 88
Q ss_pred HHHHHHhhC----C--eEEEEcCCccCHHHHhhCCe
Q 001837 578 KIINQFKQE----G--KTAMIGDGINDAPALATADI 607 (1007)
Q Consensus 578 ~iV~~Lq~~----G--~VamVGDG~NDa~ALk~ADV 607 (1007)
..++.+++. + .++..||+.+|+.|.++++|
T Consensus 105 ~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi 140 (157)
T smart00775 105 ACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGI 140 (157)
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCC
Confidence 888888872 4 57789999999999988776
No 143
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=94.46 E-value=0.1 Score=59.52 Aligned_cols=89 Identities=12% Similarity=0.110 Sum_probs=69.2
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH----hCCCcceEEeccCHhHHHHHHHHHhh-CC----eEEEEc
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQ----LGNALNVVHSELLPEDKAKIINQFKQ-EG----KTAMIG 593 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~----lGI~~~~V~ar~sPeqK~~iV~~Lq~-~G----~VamVG 593 (1007)
++.+++.++|++|++.|+++.++|.-+...|..+-+. +|+...-.+....++.|...++.+-+ .| .++|||
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~~~~~~~~pk~~~i~~~~~~l~i~~~~~vfid 110 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFDARSINWGPKSESLRKIAKKLNLGTDSFLFID 110 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHeeEEEEecCchHHHHHHHHHHhCCCcCcEEEEC
Confidence 4578999999999999999999999999999999998 88763222222334456665555433 33 699999
Q ss_pred CCccCHHHHhhCCeeEEe
Q 001837 594 DGINDAPALATADIGISM 611 (1007)
Q Consensus 594 DG~NDa~ALk~ADVGIAm 611 (1007)
|...|..+.+++...+.+
T Consensus 111 D~~~d~~~~~~~lp~~~~ 128 (320)
T TIGR01686 111 DNPAERANVKITLPVKTL 128 (320)
T ss_pred CCHHHHHHHHHHCCCCcc
Confidence 999999999998887655
No 144
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=94.25 E-value=0.15 Score=58.74 Aligned_cols=87 Identities=21% Similarity=0.248 Sum_probs=61.6
Q ss_pred CcccccHHHHHHHHHHCCCeEEEEcCC---------------CHHHHHHHHHHhCCCcceEEecc--------CHhHHHH
Q 001837 522 DACRTGAAEAVNQLKSLGIRTAMLTGD---------------NQSAAMQAQEQLGNALNVVHSEL--------LPEDKAK 578 (1007)
Q Consensus 522 D~lR~~a~eaI~~Lr~aGIkv~mlTGD---------------~~~tA~~vA~~lGI~~~~V~ar~--------sPeqK~~ 578 (1007)
-++.|++.+++++|++.|++++|+|.- ....+..+.+..|+..+.++... ...-|..
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~fd~i~i~~~~~sd~~~~rKP~p~ 108 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKFDEVLICPHFPEDNCSCRKPKTG 108 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCceeeEEEeCCcCcccCCCCCCCHH
Confidence 357899999999999999999999983 24456677888887643443221 1122333
Q ss_pred HHHH-HhhCC----eEEEEcCCccCHHHHhhCCee
Q 001837 579 IINQ-FKQEG----KTAMIGDGINDAPALATADIG 608 (1007)
Q Consensus 579 iV~~-Lq~~G----~VamVGDG~NDa~ALk~ADVG 608 (1007)
++.. +++.+ .+.||||+.+|..+-+.|++-
T Consensus 109 ~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~ 143 (354)
T PRK05446 109 LVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIK 143 (354)
T ss_pred HHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCe
Confidence 4433 33332 699999999999999999984
No 145
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=94.20 E-value=0.14 Score=67.43 Aligned_cols=109 Identities=21% Similarity=0.282 Sum_probs=76.2
Q ss_pred ccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc---ceEE-e----ccCHhHHHHHHHHHhhCC----eEEE
Q 001837 524 CRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL---NVVH-S----ELLPEDKAKIINQFKQEG----KTAM 591 (1007)
Q Consensus 524 lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~---~~V~-a----r~sPeqK~~iV~~Lq~~G----~Vam 591 (1007)
+.||+.+.+++|+++|+++.++|+-....+..+-+.+|+.. +.++ + +..|+... +.+.+++.| .++|
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~-~~~a~~~lgv~p~e~v~ 240 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDI-FLAAAKILGVPTSECVV 240 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECcccccCCCCHHH-HHHHHHHcCcCcccEEE
Confidence 57999999999999999999999999999999989999851 2332 2 22332221 123344443 5999
Q ss_pred EcCCccCHHHHhhCCe-eEEeCC--CCcHHHHhhcCEEEecCCcchH
Q 001837 592 IGDGINDAPALATADI-GISMGI--SGSALATETGQVILMSNDIRKV 635 (1007)
Q Consensus 592 VGDG~NDa~ALk~ADV-GIAmg~--~gs~~A~~aADiVLl~~~l~~I 635 (1007)
|||..+|+.|-++|++ -|.+.. ...+.....+|+++ +++..+
T Consensus 241 IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi--~~l~el 285 (1057)
T PLN02919 241 IEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIR--KDIGNI 285 (1057)
T ss_pred EcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEE--CChHHC
Confidence 9999999999999997 344431 11233445678887 556554
No 146
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=94.12 E-value=0.17 Score=56.15 Aligned_cols=80 Identities=14% Similarity=0.204 Sum_probs=59.4
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCC---HHHHHHHHHHhCCCc---ceEEeccCHhHHHHHHHHHhhC-CeEEEEcCC
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDN---QSAAMQAQEQLGNAL---NVVHSELLPEDKAKIINQFKQE-GKTAMIGDG 595 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~---~~tA~~vA~~lGI~~---~~V~ar~sPeqK~~iV~~Lq~~-G~VamVGDG 595 (1007)
++-|++.+.++.|++.|+++.++|+-. ...+...-+..|+.. +.++.|-....|..-.+.+.+. ++++||||-
T Consensus 118 ~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~~~~~K~~rr~~I~~~y~Ivl~vGD~ 197 (266)
T TIGR01533 118 KPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKKDKSSKESRRQKVQKDYEIVLLFGDN 197 (266)
T ss_pred CcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCCCCCCcHHHHHHHHhcCCEEEEECCC
Confidence 467899999999999999999999966 344456667789863 3566554334566666666544 489999999
Q ss_pred ccCHHHH
Q 001837 596 INDAPAL 602 (1007)
Q Consensus 596 ~NDa~AL 602 (1007)
.+|....
T Consensus 198 ~~Df~~~ 204 (266)
T TIGR01533 198 LLDFDDF 204 (266)
T ss_pred HHHhhhh
Confidence 9998653
No 147
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=94.10 E-value=0.18 Score=54.56 Aligned_cols=78 Identities=18% Similarity=0.212 Sum_probs=59.2
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHH---HHHHHHHhCCCc-ceEEeccC-HhH------HHHHHHHHhhCC--eE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSA---AMQAQEQLGNAL-NVVHSELL-PED------KAKIINQFKQEG--KT 589 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~t---A~~vA~~lGI~~-~~V~ar~s-Peq------K~~iV~~Lq~~G--~V 589 (1007)
|.-|++.++++.|++.|++|+++||-.... +..--++.|++. +.++-|-. ... |...=+.+.+.| ++
T Consensus 120 paip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~~~LiLR~~~d~~~~~~~yKs~~R~~l~~~GYrIv 199 (229)
T TIGR01675 120 PALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGWKHLILRGLEDSNKTVVTYKSEVRKSLMEEGYRIW 199 (229)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCcCeeeecCCCCCCchHhHHHHHHHHHHHhCCceEE
Confidence 567899999999999999999999998765 334445678874 45555531 112 777777788788 78
Q ss_pred EEEcCCccCHH
Q 001837 590 AMIGDGINDAP 600 (1007)
Q Consensus 590 amVGDG~NDa~ 600 (1007)
+.+||-.+|..
T Consensus 200 ~~iGDq~sDl~ 210 (229)
T TIGR01675 200 GNIGDQWSDLL 210 (229)
T ss_pred EEECCChHHhc
Confidence 99999999863
No 148
>PLN02580 trehalose-phosphatase
Probab=93.85 E-value=0.28 Score=57.06 Aligned_cols=66 Identities=26% Similarity=0.327 Sum_probs=47.2
Q ss_pred ccCHh---HHHHHHHHHhhC-C-------eEEEEcCCccCHHHHhh-----CCeeEEeCCCCcHHHHhhcCEEEecCCcc
Q 001837 570 ELLPE---DKAKIINQFKQE-G-------KTAMIGDGINDAPALAT-----ADIGISMGISGSALATETGQVILMSNDIR 633 (1007)
Q Consensus 570 r~sPe---qK~~iV~~Lq~~-G-------~VamVGDG~NDa~ALk~-----ADVGIAmg~~gs~~A~~aADiVLl~~~l~ 633 (1007)
++.|. +|...|+.|.+. | .++++||+.||..|++. +++||+|| ++.. ...|++.| ++..
T Consensus 293 EVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vg-n~~~--~t~A~y~L--~dp~ 367 (384)
T PLN02580 293 EVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVS-SVPK--ESNAFYSL--RDPS 367 (384)
T ss_pred EEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEe-cCCC--CccceEEc--CCHH
Confidence 44553 788888877654 3 14899999999999996 58999998 3332 22577777 6777
Q ss_pred hHHHHHH
Q 001837 634 KVPEAIR 640 (1007)
Q Consensus 634 ~I~~lI~ 640 (1007)
.+..+++
T Consensus 368 eV~~~L~ 374 (384)
T PLN02580 368 EVMEFLK 374 (384)
T ss_pred HHHHHHH
Confidence 7776664
No 149
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=93.75 E-value=0.4 Score=50.84 Aligned_cols=56 Identities=14% Similarity=0.178 Sum_probs=42.6
Q ss_pred eEEEEEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCC
Q 001837 504 TIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNA 563 (1007)
Q Consensus 504 ~~i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~ 563 (1007)
.+++...|+++++ =+.+ -..+.+.+.+|+++|++|+.+|.-....-...-+.+|+.
T Consensus 8 ~lIFtDlD~TLl~-~~ye---~~pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 8 LLIFTDLDGTLLP-HSYE---WQPAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred eEEEEcccCcccC-CCCC---CCccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4566666777766 2222 235788999999999999999988887777888888876
No 150
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=93.69 E-value=0.28 Score=52.89 Aligned_cols=89 Identities=18% Similarity=0.157 Sum_probs=61.5
Q ss_pred ecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh---CCCc--ceEEec---cCH--hHHHHHHHHHhhCC-e
Q 001837 520 LSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQL---GNAL--NVVHSE---LLP--EDKAKIINQFKQEG-K 588 (1007)
Q Consensus 520 l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~l---GI~~--~~V~ar---~sP--eqK~~iV~~Lq~~G-~ 588 (1007)
++-++.||+.+++++|+++|+++.++|..+......+-+.. ++.. +.+|.. ..| +-=..+++.+.-.. .
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~fd~~~g~KP~p~~y~~i~~~lgv~p~e 171 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFDTTVGLKTEAQSYVKIAGQLGSPPRE 171 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEEEeCcccCCCHHHHHHHHHHhCcChhH
Confidence 34568999999999999999999999998888777766664 2221 122321 122 22233333333222 5
Q ss_pred EEEEcCCccCHHHHhhCCee
Q 001837 589 TAMIGDGINDAPALATADIG 608 (1007)
Q Consensus 589 VamVGDG~NDa~ALk~ADVG 608 (1007)
++||||...|+.|-++|++-
T Consensus 172 ~lfVgDs~~Di~AA~~AG~~ 191 (220)
T TIGR01691 172 ILFLSDIINELDAARKAGLH 191 (220)
T ss_pred EEEEeCCHHHHHHHHHcCCE
Confidence 99999999999999999984
No 151
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=93.69 E-value=0.21 Score=49.08 Aligned_cols=82 Identities=12% Similarity=0.131 Sum_probs=56.9
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCC-CHHHHHHHHHHhC-------CCc---ceEEeccCHhHH--HHHHHHHh--hCC
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGD-NQSAAMQAQEQLG-------NAL---NVVHSELLPEDK--AKIINQFK--QEG 587 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD-~~~tA~~vA~~lG-------I~~---~~V~ar~sPeqK--~~iV~~Lq--~~G 587 (1007)
++.+++.+.++.|++.|+++.++|+- ....+..+-+..| +.. ..+.++-.|..+ ..+++.+. -..
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~~~~~pkp~~~~~a~~~lg~~~~p 108 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTIGYWLPKSPRLVEIALKLNGVLKP 108 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhhhcCCCcHHHHHHHHHHHhcCCCCc
Confidence 68999999999999999999999999 7887877777777 221 122232334333 22233333 222
Q ss_pred -eEEEEcCCccCHHHHhh
Q 001837 588 -KTAMIGDGINDAPALAT 604 (1007)
Q Consensus 588 -~VamVGDG~NDa~ALk~ 604 (1007)
.++||||...|..+++.
T Consensus 109 ~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 109 KSILFVDDRPDNNEEVDY 126 (128)
T ss_pred ceEEEECCCHhHHHHHHh
Confidence 59999999999877653
No 152
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=93.60 E-value=0.15 Score=54.49 Aligned_cols=37 Identities=41% Similarity=0.546 Sum_probs=31.5
Q ss_pred HHHHHHHHHhhC-C----eEEEEcCCccCHHHHhhCCeeEEe
Q 001837 575 DKAKIINQFKQE-G----KTAMIGDGINDAPALATADIGISM 611 (1007)
Q Consensus 575 qK~~iV~~Lq~~-G----~VamVGDG~NDa~ALk~ADVGIAm 611 (1007)
.|...++.+.+. | .|+++||+.||.+||+.|+.|||+
T Consensus 179 ~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va~ 220 (221)
T TIGR02463 179 SKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVVI 220 (221)
T ss_pred CHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEEe
Confidence 477777776554 4 599999999999999999999987
No 153
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=93.44 E-value=0.26 Score=50.85 Aligned_cols=104 Identities=22% Similarity=0.176 Sum_probs=77.4
Q ss_pred cCCCCCeEEEEEECCEEEEEEEecCcccccHHHHHHHHHHCCCe--EEEEcCC-------CHHHHHHHHHHhCCCcceE-
Q 001837 498 PKMKGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIR--TAMLTGD-------NQSAAMQAQEQLGNALNVV- 567 (1007)
Q Consensus 498 ~~~~g~~~i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIk--v~mlTGD-------~~~tA~~vA~~lGI~~~~V- 567 (1007)
+...|.+.+.+..|.++.. --++.+.|+..+.+++|++.+.. +.++|-- +...|..+++.+||. .+
T Consensus 36 Lk~~Gik~li~DkDNTL~~--~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp--vl~ 111 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTLTP--PYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIP--VLR 111 (168)
T ss_pred hhhcCceEEEEcCCCCCCC--CCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCc--EEE
Confidence 3445666666666665422 24677889999999999999874 9999976 489999999999987 65
Q ss_pred EeccCHhHHHHHHHHHhhC-----C-eEEEEcCC-ccCHHHHhhC
Q 001837 568 HSELLPEDKAKIINQFKQE-----G-KTAMIGDG-INDAPALATA 605 (1007)
Q Consensus 568 ~ar~sPeqK~~iV~~Lq~~-----G-~VamVGDG-~NDa~ALk~A 605 (1007)
+..-.|.-..++++.++.. - .++||||- ..|+-+-...
T Consensus 112 h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~ 156 (168)
T PF09419_consen 112 HRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRM 156 (168)
T ss_pred eCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhcc
Confidence 4456897778899988765 2 69999997 5665554443
No 154
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=93.39 E-value=0.58 Score=51.64 Aligned_cols=48 Identities=25% Similarity=0.518 Sum_probs=34.7
Q ss_pred EEEEecCc----ccccHHHHHHHHHHCCCeEEEEcCCCHHHH---HHHHHHhCCC
Q 001837 516 GIFCLSDA----CRTGAAEAVNQLKSLGIRTAMLTGDNQSAA---MQAQEQLGNA 563 (1007)
Q Consensus 516 Gli~l~D~----lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA---~~vA~~lGI~ 563 (1007)
|.+.-.+. +-|++.++|++|+++|++++++||.+..+. ....+++|++
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 33344455 788999999999999999999998766653 3333445654
No 155
>PRK10444 UMP phosphatase; Provisional
Probab=92.85 E-value=0.64 Score=51.11 Aligned_cols=45 Identities=18% Similarity=0.330 Sum_probs=38.5
Q ss_pred EEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh
Q 001837 516 GIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQL 560 (1007)
Q Consensus 516 Gli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~l 560 (1007)
|.+.-.+.+-|++.++|++|++.|++++++|+....+...+++++
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 455556788899999999999999999999999988887777664
No 156
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=92.59 E-value=0.15 Score=53.92 Aligned_cols=89 Identities=18% Similarity=0.185 Sum_probs=57.4
Q ss_pred CcccccHHHHHHHHHHCCCeEEEEcCCCHHH--HHHHHHHhCCCc--ceEEec-----cCHhHHHHHHHHHhhCC----e
Q 001837 522 DACRTGAAEAVNQLKSLGIRTAMLTGDNQSA--AMQAQEQLGNAL--NVVHSE-----LLPEDKAKIINQFKQEG----K 588 (1007)
Q Consensus 522 D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~t--A~~vA~~lGI~~--~~V~ar-----~sPeqK~~iV~~Lq~~G----~ 588 (1007)
-++.|++.+++++|++.|+++.++|...... ........++.. +.|+.. ..|+-. -+...+++.| .
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~-~~~~~~~~~g~~~~~ 171 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLEGLRKPDPR-IYQLMLERLGVAPEE 171 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeecCCCCCCHH-HHHHHHHHcCCCHHH
Confidence 3578999999999999999999999865432 322233344421 133321 133322 1223334433 5
Q ss_pred EEEEcCCccCHHHHhhCCee-EEe
Q 001837 589 TAMIGDGINDAPALATADIG-ISM 611 (1007)
Q Consensus 589 VamVGDG~NDa~ALk~ADVG-IAm 611 (1007)
++||||...|+.+-++|++- |.+
T Consensus 172 ~l~i~D~~~di~aA~~aG~~~i~v 195 (211)
T TIGR02247 172 CVFLDDLGSNLKPAAALGITTIKV 195 (211)
T ss_pred eEEEcCCHHHHHHHHHcCCEEEEE
Confidence 99999999999999999983 444
No 157
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=92.55 E-value=0.24 Score=54.11 Aligned_cols=70 Identities=23% Similarity=0.291 Sum_probs=50.3
Q ss_pred eEEeccCHhHHHHHHHHHhhC-C----eEEEEcCCccCHHHHhhC--------CeeEEeCCCCcHHHHhhcCEEEecCCc
Q 001837 566 VVHSELLPEDKAKIINQFKQE-G----KTAMIGDGINDAPALATA--------DIGISMGISGSALATETGQVILMSNDI 632 (1007)
Q Consensus 566 ~V~ar~sPeqK~~iV~~Lq~~-G----~VamVGDG~NDa~ALk~A--------DVGIAmg~~gs~~A~~aADiVLl~~~l 632 (1007)
.+-.+-.+-+|...++.+.+. + .++|+||+.||.+|++.+ ..+|.|+ .+. .+..|++++ ++.
T Consensus 158 ~~e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~-~g~--~~~~A~~~~--~~~ 232 (244)
T TIGR00685 158 VVELKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG-SGS--KKTVAKFHL--TGP 232 (244)
T ss_pred EEEEeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe-cCC--cCCCceEeC--CCH
Confidence 334445566898888887654 3 699999999999999998 4788885 232 355688887 567
Q ss_pred chHHHHHH
Q 001837 633 RKVPEAIR 640 (1007)
Q Consensus 633 ~~I~~lI~ 640 (1007)
..+..++.
T Consensus 233 ~~v~~~L~ 240 (244)
T TIGR00685 233 QQVLEFLG 240 (244)
T ss_pred HHHHHHHH
Confidence 76666553
No 158
>PHA02597 30.2 hypothetical protein; Provisional
Probab=91.92 E-value=0.37 Score=50.43 Aligned_cols=84 Identities=17% Similarity=0.113 Sum_probs=56.0
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc-------ceEEeccCHhHHHHHHH-HHhhCC--eEEEE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL-------NVVHSELLPEDKAKIIN-QFKQEG--KTAMI 592 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~-------~~V~ar~sPeqK~~iV~-~Lq~~G--~VamV 592 (1007)
++.|++.+++++|++.+ +.+++|.-+..+....-+.+|+.. ..+.++.... |..++. .+++.| .++||
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~~~-kp~~~~~a~~~~~~~~~v~v 151 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGHDES-KEKLFIKAKEKYGDRVVCFV 151 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEeccCcc-cHHHHHHHHHHhCCCcEEEe
Confidence 46899999999999975 567777655455554556666541 1122333321 344433 444446 68999
Q ss_pred cCCccCHHHHhhC--Cee
Q 001837 593 GDGINDAPALATA--DIG 608 (1007)
Q Consensus 593 GDG~NDa~ALk~A--DVG 608 (1007)
||..+|..|-++| +|-
T Consensus 152 gDs~~di~aA~~a~~Gi~ 169 (197)
T PHA02597 152 DDLAHNLDAAHEALSQLP 169 (197)
T ss_pred CCCHHHHHHHHHHHcCCc
Confidence 9999999999999 884
No 159
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=91.74 E-value=0.39 Score=52.70 Aligned_cols=44 Identities=23% Similarity=0.380 Sum_probs=34.9
Q ss_pred hHHHHHHHHHhhC-C----eEEEEcCCccCHHHHhhCCeeEEeCCCCcHH
Q 001837 574 EDKAKIINQFKQE-G----KTAMIGDGINDAPALATADIGISMGISGSAL 618 (1007)
Q Consensus 574 eqK~~iV~~Lq~~-G----~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~ 618 (1007)
..|...|+.|+++ + .|+++||..||.+||..++-||.+| +....
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~-Na~~e 212 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVG-NAQPE 212 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-T-TS-HH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEc-CCCHH
Confidence 5699999988876 4 5888999999999999999999998 44433
No 160
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=91.19 E-value=0.29 Score=51.95 Aligned_cols=88 Identities=22% Similarity=0.345 Sum_probs=64.7
Q ss_pred cccccHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHhCCCcceEEe--------------------------ccCHh-
Q 001837 523 ACRTGAAEAVNQLKSLGI-RTAMLTGDNQSAAMQAQEQLGNALNVVHS--------------------------ELLPE- 574 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGI-kv~mlTGD~~~tA~~vA~~lGI~~~~V~a--------------------------r~sPe- 574 (1007)
|+-|+..++|+.+++.|- .++++|.-|..--..+-+..||. ..|+ ...|.
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~--d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~CPsN 161 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIH--DLFSEIFTNPACVDASGRLLVRPYHTQHSCNLCPSN 161 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHH--HHHHHHhcCCcccCCCCcEEeecCCCCCccCcCchh
Confidence 567899999999999986 99999999999999999988875 1111 11232
Q ss_pred -HHHHHHHHHhhC----C----eEEEEcCCccC-HHHHhhCCeeEEeC
Q 001837 575 -DKAKIINQFKQE----G----KTAMIGDGIND-APALATADIGISMG 612 (1007)
Q Consensus 575 -qK~~iV~~Lq~~----G----~VamVGDG~ND-a~ALk~ADVGIAmg 612 (1007)
=|..++..++.. | ++.++|||.|| +|.++...--++|-
T Consensus 162 mCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~amp 209 (256)
T KOG3120|consen 162 MCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMP 209 (256)
T ss_pred hhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecc
Confidence 277777777643 3 58999999999 56665554444554
No 161
>PLN02645 phosphoglycolate phosphatase
Probab=90.95 E-value=0.52 Score=53.49 Aligned_cols=96 Identities=17% Similarity=0.137 Sum_probs=63.8
Q ss_pred EEEEEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH---HHhCCCcc--eEEeccCHhHHHHH
Q 001837 505 IGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQ---EQLGNALN--VVHSELLPEDKAKI 579 (1007)
Q Consensus 505 ~i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA---~~lGI~~~--~V~ar~sPeqK~~i 579 (1007)
.+.+-.||++ .-.+.+=|++.++|++|++.|++++++|+....+...++ +.+|+... .|+.... .+
T Consensus 30 ~~~~D~DGtl----~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~~I~ts~~-----~~ 100 (311)
T PLN02645 30 TFIFDCDGVI----WKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEEEIFSSSF-----AA 100 (311)
T ss_pred EEEEeCcCCe----EeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEeehHH-----HH
Confidence 4445555554 345667799999999999999999999999977766666 56777522 3433322 22
Q ss_pred HHHHhhC----CeEEEEcCCccCHHHHhhCCeeE
Q 001837 580 INQFKQE----GKTAMIGDGINDAPALATADIGI 609 (1007)
Q Consensus 580 V~~Lq~~----G~VamVGDG~NDa~ALk~ADVGI 609 (1007)
...|++. +.-+++++...|..+++.+++=+
T Consensus 101 ~~~l~~~~~~~~~~V~viG~~~~~~~l~~~Gi~~ 134 (311)
T PLN02645 101 AAYLKSINFPKDKKVYVIGEEGILEELELAGFQY 134 (311)
T ss_pred HHHHHhhccCCCCEEEEEcCHHHHHHHHHCCCEE
Confidence 2223321 23456666678889999887644
No 162
>PLN03017 trehalose-phosphatase
Probab=90.72 E-value=1.5 Score=50.64 Aligned_cols=55 Identities=15% Similarity=0.078 Sum_probs=44.2
Q ss_pred CCeEEEEEECCEEEEEEEecC--cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH
Q 001837 502 GNTIGYIFSGASPVGIFCLSD--ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQ 557 (1007)
Q Consensus 502 g~~~i~v~~d~~~lGli~l~D--~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA 557 (1007)
....+++..||+++-+..-.| .+-++..++|++|+ .|+.++++||........+.
T Consensus 110 k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 110 KQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred CCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 356677788999987776444 37889999999999 78999999999888877663
No 163
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=90.53 E-value=0.5 Score=49.67 Aligned_cols=85 Identities=19% Similarity=0.229 Sum_probs=56.4
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-hCCCc--ceEE-ec----cCHhHHHHHHHHHhhCC----eEE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQ-LGNAL--NVVH-SE----LLPEDKAKIINQFKQEG----KTA 590 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~-lGI~~--~~V~-ar----~sPeqK~~iV~~Lq~~G----~Va 590 (1007)
++.|++.+++++|++.|+++.++|.-+.......-.. .++.. +.++ +. ..|.- .-+-..+++.| .++
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p-~~~~~~~~~~~~~p~~~l 162 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEA-RIYQHVLQAEGFSAADAV 162 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCH-HHHHHHHHHcCCChhHeE
Confidence 4789999999999999999999998776655433222 23321 1222 21 23321 11223344444 599
Q ss_pred EEcCCccCHHHHhhCCee
Q 001837 591 MIGDGINDAPALATADIG 608 (1007)
Q Consensus 591 mVGDG~NDa~ALk~ADVG 608 (1007)
||||...|+.+-++|++-
T Consensus 163 ~vgD~~~di~aA~~aG~~ 180 (199)
T PRK09456 163 FFDDNADNIEAANALGIT 180 (199)
T ss_pred EeCCCHHHHHHHHHcCCE
Confidence 999999999999999884
No 164
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=90.03 E-value=0.36 Score=45.51 Aligned_cols=86 Identities=20% Similarity=0.308 Sum_probs=53.6
Q ss_pred EEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH---HHhCCCcc--eEEeccCHhHHHHHHHHHhh-C-C-
Q 001837 516 GIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQ---EQLGNALN--VVHSELLPEDKAKIINQFKQ-E-G- 587 (1007)
Q Consensus 516 Gli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA---~~lGI~~~--~V~ar~sPeqK~~iV~~Lq~-~-G- 587 (1007)
|++...+.+=|++.++|++|+++|++++++|.....+...++ +.+|+..+ .|+... ....+.|++ . +
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i~ts~-----~~~~~~l~~~~~~~ 81 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEIITSG-----MAAAEYLKEHKGGK 81 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGEEEHH-----HHHHHHHHHHTTSS
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEEEChH-----HHHHHHHHhcCCCC
Confidence 344457888999999999999999999999988766555444 56787632 333221 233445555 2 3
Q ss_pred eEEEEcCCccCHHHHhhCCe
Q 001837 588 KTAMIGDGINDAPALATADI 607 (1007)
Q Consensus 588 ~VamVGDG~NDa~ALk~ADV 607 (1007)
+|.++|.. .....|+.+++
T Consensus 82 ~v~vlG~~-~l~~~l~~~G~ 100 (101)
T PF13344_consen 82 KVYVLGSD-GLREELREAGF 100 (101)
T ss_dssp EEEEES-H-HHHHHHHHTTE
T ss_pred EEEEEcCH-HHHHHHHHcCC
Confidence 88888865 44455555543
No 165
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=90.02 E-value=0.81 Score=48.76 Aligned_cols=85 Identities=11% Similarity=0.097 Sum_probs=60.0
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc---eEEec-cCHhHH--HH-HHHHHhhCC----eEEE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN---VVHSE-LLPEDK--AK-IINQFKQEG----KTAM 591 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~---~V~ar-~sPeqK--~~-iV~~Lq~~G----~Vam 591 (1007)
++.|++.++++.| ++++.++|+.....+...-+..|+... .+++. -....| .. +...+++.| .++|
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l~ 164 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENCIL 164 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHeEE
Confidence 4678999999998 499999999998888888888888621 23222 111112 22 233344444 5999
Q ss_pred EcCCccCHHHHhhCCeeEE
Q 001837 592 IGDGINDAPALATADIGIS 610 (1007)
Q Consensus 592 VGDG~NDa~ALk~ADVGIA 610 (1007)
|||..+|..+-++|++-..
T Consensus 165 igDs~~di~aA~~aG~~~i 183 (221)
T PRK10563 165 VDDSSAGAQSGIAAGMEVF 183 (221)
T ss_pred EeCcHhhHHHHHHCCCEEE
Confidence 9999999999999997654
No 166
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=89.89 E-value=0.86 Score=47.08 Aligned_cols=82 Identities=16% Similarity=0.100 Sum_probs=57.9
Q ss_pred cccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc--ceEEec-----cCH--hHHHHHHHHHhhCC-eEEEEcC
Q 001837 525 RTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL--NVVHSE-----LLP--EDKAKIINQFKQEG-KTAMIGD 594 (1007)
Q Consensus 525 R~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~--~~V~ar-----~sP--eqK~~iV~~Lq~~G-~VamVGD 594 (1007)
-| ..++++.|++. +++.++|+.....+..+-+.+|+.. +.|++. -.| +-=..+.+.+.... .++||||
T Consensus 90 ~~-~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~igD 167 (188)
T PRK10725 90 LP-LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVVFED 167 (188)
T ss_pred cc-HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhccCCCCChHHHHHHHHHcCCCHHHeEEEec
Confidence 44 46899999875 8999999999999999999999862 233322 112 22223333333222 5999999
Q ss_pred CccCHHHHhhCCee
Q 001837 595 GINDAPALATADIG 608 (1007)
Q Consensus 595 G~NDa~ALk~ADVG 608 (1007)
..+|+.+-++|++-
T Consensus 168 s~~di~aA~~aG~~ 181 (188)
T PRK10725 168 ADFGIQAARAAGMD 181 (188)
T ss_pred cHhhHHHHHHCCCE
Confidence 99999999999873
No 167
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=89.48 E-value=0.62 Score=50.62 Aligned_cols=79 Identities=23% Similarity=0.265 Sum_probs=58.5
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCH---HHHHHHHHHhCCCc-ceEEeccCH--------hHHHHHHHHHhhCC--e
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQ---SAAMQAQEQLGNAL-NVVHSELLP--------EDKAKIINQFKQEG--K 588 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~---~tA~~vA~~lGI~~-~~V~ar~sP--------eqK~~iV~~Lq~~G--~ 588 (1007)
+.=|++.+.++.+++.|++|+.|||-+. ..+..--++.|+.. +.++-|-.. +-|...-+.+++.| +
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~l~lr~~~~~~~~~~~~yK~~~r~~i~~~Gy~I 194 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDHLILRPDKDPSKKSAVEYKSERRKEIEKKGYRI 194 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSCGEEEEESSTSS------SHHHHHHHHHTTEEE
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccchhccccccccccccccccchHHHHHHHHcCCcE
Confidence 4457899999999999999999998543 34445556778764 344433322 24888888898887 7
Q ss_pred EEEEcCCccCHHH
Q 001837 589 TAMIGDGINDAPA 601 (1007)
Q Consensus 589 VamVGDG~NDa~A 601 (1007)
++++||-.+|...
T Consensus 195 i~~iGD~~~D~~~ 207 (229)
T PF03767_consen 195 IANIGDQLSDFSG 207 (229)
T ss_dssp EEEEESSGGGCHC
T ss_pred EEEeCCCHHHhhc
Confidence 8999999999764
No 168
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=89.46 E-value=1.3 Score=56.84 Aligned_cols=58 Identities=3% Similarity=-0.016 Sum_probs=44.0
Q ss_pred CCCeEEEEEECCEEEEEEEecCcccccHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHH
Q 001837 501 KGNTIGYIFSGASPVGIFCLSDACRTGAAEAVNQL-KSLGIRTAMLTGDNQSAAMQAQE 558 (1007)
Q Consensus 501 ~g~~~i~v~~d~~~lGli~l~D~lR~~a~eaI~~L-r~aGIkv~mlTGD~~~tA~~vA~ 558 (1007)
...+.+++..||+++-.-...-.+.+++.+++++| ++.|+.++++||....+....-.
T Consensus 594 ~~~rlI~LDyDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~ 652 (854)
T PLN02205 594 TTTRAILLDYDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFS 652 (854)
T ss_pred hcCeEEEEecCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhC
Confidence 34567778889988844333335668999999998 67899999999998887766543
No 169
>PRK14054 methionine sulfoxide reductase A; Provisional
Probab=88.84 E-value=1.1 Score=46.42 Aligned_cols=50 Identities=18% Similarity=0.135 Sum_probs=45.0
Q ss_pred chHHHHHHHHHhCCCCeeEEEEecCCCe-------------------EEEEEcCCcccHHHHHHHhhhc
Q 001837 22 SSEVPLIENILKSLEGVKEVSVIVPSRT-------------------VIVLHDALLISQHQIVKALNQA 71 (1007)
Q Consensus 22 ~~Ca~~IE~~L~~l~GV~~v~Vn~~t~t-------------------v~V~~D~~~~s~~~I~~aL~~a 71 (1007)
.+|-|.+|..+..++||.++.+=+..+. |.|.|||..++.++|++..-..
T Consensus 10 gGCFWg~E~~f~~~~GV~~t~vGYagG~~~~PtY~~Vcsg~tgh~E~V~V~yDp~~isy~~Ll~~f~~~ 78 (172)
T PRK14054 10 GGCFWGMEAPFDRVKGVISTRVGYTGGHVENPTYEQVCSGTTGHAEAVEITYDPAVISYRELLELFFQI 78 (172)
T ss_pred cCChhhhHHHHccCCCEEEEEeeecCCCCCCCChhhcccCCCCCeEEEEEEECCCcCCHHHHHHHHHHh
Confidence 7899999999999999999998887765 8999999999999998887654
No 170
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=88.71 E-value=0.9 Score=46.97 Aligned_cols=82 Identities=13% Similarity=0.168 Sum_probs=59.5
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc--ceEEec---------cCHhHHHHHHHHHhhCC----
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL--NVVHSE---------LLPEDKAKIINQFKQEG---- 587 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~--~~V~ar---------~sPeqK~~iV~~Lq~~G---- 587 (1007)
++.+++.+++++|+ .+++++|.-+...+..+.+.+|+.. +.+++. ..|.. .-+...+++.|
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p-~~~~~~~~~~~~~~~ 159 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTANPDYLLPKPSP-QAYEKALREAGVDPE 159 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeecccCccCCCCCCH-HHHHHHHHHhCCCcc
Confidence 36789999999998 4799999999999999999999852 233332 13422 12233334333
Q ss_pred eEEEEcCCccCHHHHhhCCee
Q 001837 588 KTAMIGDGINDAPALATADIG 608 (1007)
Q Consensus 588 ~VamVGDG~NDa~ALk~ADVG 608 (1007)
.++||||...|..+-++|++-
T Consensus 160 ~~l~vgD~~~di~aA~~~G~~ 180 (184)
T TIGR01993 160 RAIFFDDSARNIAAAKALGMK 180 (184)
T ss_pred ceEEEeCCHHHHHHHHHcCCE
Confidence 589999999999998988874
No 171
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=87.91 E-value=17 Score=40.50 Aligned_cols=85 Identities=18% Similarity=0.178 Sum_probs=49.1
Q ss_pred cccHHHHHHHHHHCCCeEEEEcCCCHHHH--------------HHHHHHhCCCcceEEeccCHhHHHHHHHHHhhCC-eE
Q 001837 525 RTGAAEAVNQLKSLGIRTAMLTGDNQSAA--------------MQAQEQLGNALNVVHSELLPEDKAKIINQFKQEG-KT 589 (1007)
Q Consensus 525 R~~a~eaI~~Lr~aGIkv~mlTGD~~~tA--------------~~vA~~lGI~~~~V~ar~sPeqK~~iV~~Lq~~G-~V 589 (1007)
-+++.++++.|++.|+ +.++|.-..... ..+....|-. ......-.|+-=..+++.+.-.. .+
T Consensus 145 y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~~~~~~g~~~~~i~~~~g~~-~~~~gKP~p~~~~~~~~~~~~~~~~~ 222 (279)
T TIGR01452 145 YAKLREACAHLREPGC-LFVATNRDPWHPLSDGSRTPGTGSLVAAIETASGRQ-PLVVGKPSPYMFECITENFSIDPART 222 (279)
T ss_pred HHHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCCcccChHHHHHHHHHHhCCc-eeccCCCCHHHHHHHHHHhCCChhhE
Confidence 6789999999999898 566765332111 0111111211 01122334443334444443233 79
Q ss_pred EEEcCCc-cCHHHHhhCCee-EEe
Q 001837 590 AMIGDGI-NDAPALATADIG-ISM 611 (1007)
Q Consensus 590 amVGDG~-NDa~ALk~ADVG-IAm 611 (1007)
+||||.. .|..+-++|++- |.+
T Consensus 223 lmIGD~~~tDI~~A~~aGi~si~V 246 (279)
T TIGR01452 223 LMVGDRLETDILFGHRCGMTTVLV 246 (279)
T ss_pred EEECCChHHHHHHHHHcCCcEEEE
Confidence 9999995 999999999873 444
No 172
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=87.74 E-value=2.4 Score=44.77 Aligned_cols=51 Identities=24% Similarity=0.414 Sum_probs=42.2
Q ss_pred EEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHH---HhCCCc
Q 001837 514 PVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQE---QLGNAL 564 (1007)
Q Consensus 514 ~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~---~lGI~~ 564 (1007)
+-|.+.++|..-|++.|+++.||+++++|..+|.-....-+.+.+ ++|++.
T Consensus 14 lSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~v 67 (262)
T KOG3040|consen 14 LSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFDV 67 (262)
T ss_pred ccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCCc
Confidence 468999999999999999999999999999998777666666655 456543
No 173
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=87.65 E-value=2.8 Score=46.00 Aligned_cols=46 Identities=11% Similarity=0.079 Sum_probs=35.5
Q ss_pred EEecCcccccHHHHHHHHHHCCCeEEEEcC---CCHHHHHHHHHHhCCC
Q 001837 518 FCLSDACRTGAAEAVNQLKSLGIRTAMLTG---DNQSAAMQAQEQLGNA 563 (1007)
Q Consensus 518 i~l~D~lR~~a~eaI~~Lr~aGIkv~mlTG---D~~~tA~~vA~~lGI~ 563 (1007)
+.-.+.+-|++.++|++|++.|++++++|| ..........+++|+.
T Consensus 12 l~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~ 60 (249)
T TIGR01457 12 MYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIP 60 (249)
T ss_pred eEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 334566677999999999999999999997 5566666666666654
No 174
>PTZ00174 phosphomannomutase; Provisional
Probab=87.09 E-value=0.47 Score=51.92 Aligned_cols=54 Identities=20% Similarity=0.289 Sum_probs=41.9
Q ss_pred ccCH--hHHHHHHHHHhhCC-eEEEEcC----CccCHHHHhhC-CeeEEeCCCCcHHHHhhcC
Q 001837 570 ELLP--EDKAKIINQFKQEG-KTAMIGD----GINDAPALATA-DIGISMGISGSALATETGQ 624 (1007)
Q Consensus 570 r~sP--eqK~~iV~~Lq~~G-~VamVGD----G~NDa~ALk~A-DVGIAmg~~gs~~A~~aAD 624 (1007)
.+.| -.|..-|+.|.+.- .|+++|| |.||.+||+.| -.|+++. +..+..+..+.
T Consensus 181 eI~~~gvsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~-n~~~~~~~~~~ 242 (247)
T PTZ00174 181 DVFPKGWDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK-NPEDTIKILKE 242 (247)
T ss_pred EeeeCCCcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeC-CHHHHHHHHHH
Confidence 4444 46999999998875 8999999 99999999977 5788886 55555555443
No 175
>PRK00058 methionine sulfoxide reductase A; Provisional
Probab=86.84 E-value=1.5 Score=46.85 Aligned_cols=50 Identities=22% Similarity=0.176 Sum_probs=44.1
Q ss_pred chHHHHHHHHHhCCCCeeEEEEecCC-------------------CeEEEEEcCCcccHHHHHHHhhhc
Q 001837 22 SSEVPLIENILKSLEGVKEVSVIVPS-------------------RTVIVLHDALLISQHQIVKALNQA 71 (1007)
Q Consensus 22 ~~Ca~~IE~~L~~l~GV~~v~Vn~~t-------------------~tv~V~~D~~~~s~~~I~~aL~~a 71 (1007)
.+|-|-+|..+.+++||.++++=+.. +.|.|.|||..++.++|++..-..
T Consensus 52 gGCFWg~E~~F~~l~GV~~t~vGYagG~~~~PtY~~VcsG~tgH~EaV~V~YDp~~ISy~~LL~~Ff~~ 120 (213)
T PRK00058 52 MGCFWGAERLFWQLPGVYSTAVGYAGGYTPNPTYREVCSGRTGHAEVVRVVYDPAVISYEQLLQVFWEN 120 (213)
T ss_pred ccCcchhHHHHhcCCCEEEEEeeecCCCCCCCChhhcccCCCCCeEEEEEEECCccCCHHHHHHHHHHh
Confidence 78999999999999999999998873 348999999999999998888653
No 176
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=86.48 E-value=1.7 Score=47.19 Aligned_cols=78 Identities=14% Similarity=0.159 Sum_probs=52.1
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc--ceEE-ec----cCHhHHHHHH-HHHhhCC----eEE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL--NVVH-SE----LLPEDKAKII-NQFKQEG----KTA 590 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~--~~V~-ar----~sPeqK~~iV-~~Lq~~G----~Va 590 (1007)
++-|++.+++++|++. +++.++|.-+.. .+..|+.. +.++ +. ..|. ..+. ..+++.| .++
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~~~~~~KP~--p~~~~~a~~~~~~~~~~~~ 184 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYFEFVLRAGPHGRSKPF--SDMYHLAAEKLNVPIGEIL 184 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhhceeEecccCCcCCCc--HHHHHHHHHHcCCChhHEE
Confidence 4668999999999975 999999985544 25667642 1222 22 1232 2232 3333433 599
Q ss_pred EEcCC-ccCHHHHhhCCee
Q 001837 591 MIGDG-INDAPALATADIG 608 (1007)
Q Consensus 591 mVGDG-~NDa~ALk~ADVG 608 (1007)
||||. ..|+.+-++|++-
T Consensus 185 ~VGD~~~~Di~~A~~aG~~ 203 (238)
T PRK10748 185 HVGDDLTTDVAGAIRCGMQ 203 (238)
T ss_pred EEcCCcHHHHHHHHHCCCe
Confidence 99999 5999999999874
No 177
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=85.99 E-value=0.54 Score=48.21 Aligned_cols=88 Identities=11% Similarity=0.021 Sum_probs=63.1
Q ss_pred EecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCc---ceEEeccC-HhHHHHHHHHHhhCC----eEE
Q 001837 519 CLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNAL---NVVHSELL-PEDKAKIINQFKQEG----KTA 590 (1007)
Q Consensus 519 ~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~---~~V~ar~s-PeqK~~iV~~Lq~~G----~Va 590 (1007)
.+.=..||++.+.+++|.+. +++++.|--....|..+.+.++... ..+++|-. ...|..+++.|...| .|.
T Consensus 38 ~~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~f~~~l~r~~~~~~~~~~~K~L~~l~~~~~~vI 116 (162)
T TIGR02251 38 PVYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKVISRRLYRESCVFTNGKYVKDLSLVGKDLSKVI 116 (162)
T ss_pred EEEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCEEeEEEEccccEEeCCCEEeEchhcCCChhhEE
Confidence 34446899999999999988 9999999999999999999999763 12333321 111222556666544 699
Q ss_pred EEcCCccCHHHHhhCCe
Q 001837 591 MIGDGINDAPALATADI 607 (1007)
Q Consensus 591 mVGDG~NDa~ALk~ADV 607 (1007)
||||...|..+-.++.|
T Consensus 117 iVDD~~~~~~~~~~NgI 133 (162)
T TIGR02251 117 IIDNSPYSYSLQPDNAI 133 (162)
T ss_pred EEeCChhhhccCccCEe
Confidence 99999988765555544
No 178
>TIGR02052 MerP mercuric transport protein periplasmic component. This model represents the periplasmic mercury (II) binding protein of the bacterial mercury detoxification system which passes mercuric ion to the MerT transporter for subsequent reduction to Hg(0) by the mercuric reductase MerA. MerP contains a distinctive GMTCXXC motif associated with metal binding. MerP is related to a larger family of metal binding proteins (pfam00403).
Probab=85.66 E-value=4.9 Score=35.40 Aligned_cols=64 Identities=19% Similarity=0.336 Sum_probs=49.1
Q ss_pred EEEEEecCCCCchHHHHHHHHHhCCCCeeEEEEecCCCeEEEEEcCCcccHHHHHHHhhhcccc
Q 001837 11 KSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARFE 74 (1007)
Q Consensus 11 ~~~l~V~Gm~C~~Ca~~IE~~L~~l~GV~~v~Vn~~t~tv~V~~D~~~~s~~~I~~aL~~aGy~ 74 (1007)
+..+.+.++.|..|...++..+...+++..+.++....+..+.+++.......+...+...++.
T Consensus 24 ~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 87 (92)
T TIGR02052 24 TVTLEVPGMTCVACPITVETALQKVDGVSKAEVTFKTKLAVVTFDDEKTNVKALTEATTDAGYP 87 (92)
T ss_pred EEEEEECCeEcHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 4567899999999999999999999999999999999988887765433444444444555554
No 179
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=84.82 E-value=3.5 Score=50.19 Aligned_cols=101 Identities=10% Similarity=0.068 Sum_probs=66.0
Q ss_pred eEEEEEECCEEEEE----EEecCc-----ccccHHHHHHHHHHCCCeEEEEcCCCH------------HHHHHHHHHhCC
Q 001837 504 TIGYIFSGASPVGI----FCLSDA-----CRTGAAEAVNQLKSLGIRTAMLTGDNQ------------SAAMQAQEQLGN 562 (1007)
Q Consensus 504 ~~i~v~~d~~~lGl----i~l~D~-----lR~~a~eaI~~Lr~aGIkv~mlTGD~~------------~tA~~vA~~lGI 562 (1007)
.+.++..|++++-. ....|+ +-|++.++|++|++.|++++|+|.-.. ..+..+.+++|+
T Consensus 169 Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgi 248 (526)
T TIGR01663 169 KIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGV 248 (526)
T ss_pred cEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCC
Confidence 46677788877632 222332 469999999999999999999997444 357788899998
Q ss_pred CcceEEecc-----C--HhHHHHHHHHHhh---C--CeEEEEcCCccCHHHHhh
Q 001837 563 ALNVVHSEL-----L--PEDKAKIINQFKQ---E--GKTAMIGDGINDAPALAT 604 (1007)
Q Consensus 563 ~~~~V~ar~-----s--PeqK~~iV~~Lq~---~--G~VamVGDG~NDa~ALk~ 604 (1007)
....+++-- . |.-=..+++.+.. - ..+.||||...|..+-+.
T Consensus 249 pfdviia~~~~~~RKP~pGm~~~a~~~~~~~~~Id~~~S~~VGDaagr~~~g~~ 302 (526)
T TIGR01663 249 PFQVFIAIGAGFYRKPLTGMWDHLKEEANDGTEIQEDDCFFVGDAAGRPANGKA 302 (526)
T ss_pred ceEEEEeCCCCCCCCCCHHHHHHHHHhcCcccCCCHHHeEEeCCcccchHHHHh
Confidence 755444321 1 2222223333321 1 158999999999876443
No 180
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=83.44 E-value=7.6 Score=41.21 Aligned_cols=114 Identities=19% Similarity=0.226 Sum_probs=73.3
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc---eEEe----ccCHhHHHHHHHHHhhCC----eEEE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN---VVHS----ELLPEDKAKIINQFKQEG----KTAM 591 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~---~V~a----r~sPeqK~~iV~~Lq~~G----~Vam 591 (1007)
++-+++.+++++|++. ++++++|.-....+....+++|+... .+.+ ...| ++.-.-..+++.| .++|
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~~~g~~KP-~~~~f~~~~~~~g~~p~~~l~ 176 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYFDAVFISEDVGVAKP-DPEIFEYALEKLGVPPEEALF 176 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhhheEEEecccccCCC-CcHHHHHHHHHcCCCcceEEE
Confidence 5678899999999999 99999998788888999999996532 2222 2344 3344555556555 5999
Q ss_pred EcCC-ccCHHHHhhCCe-eEEeCCCCcHH--HHhhcCEEEecCCcchHHHHHH
Q 001837 592 IGDG-INDAPALATADI-GISMGISGSAL--ATETGQVILMSNDIRKVPEAIR 640 (1007)
Q Consensus 592 VGDG-~NDa~ALk~ADV-GIAmg~~gs~~--A~~aADiVLl~~~l~~I~~lI~ 640 (1007)
|||. .||..+-+++++ +|-+...+... .....|..+ .++..+..++.
T Consensus 177 VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~~~i--~~l~~l~~~~~ 227 (229)
T COG1011 177 VGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEI--SSLAELLDLLE 227 (229)
T ss_pred ECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCceEE--cCHHHHHHHHh
Confidence 9996 677466677766 44443222111 114455555 45666655543
No 181
>PRK13014 methionine sulfoxide reductase A; Provisional
Probab=82.97 E-value=2.4 Score=44.49 Aligned_cols=58 Identities=14% Similarity=0.149 Sum_probs=48.5
Q ss_pred ceeEEEEEecCCCCchHHHHHHHHHhCCCCeeEEEEecCCCe-------------------EEEEEcCCcccHHHHHHHh
Q 001837 8 KYQKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRT-------------------VIVLHDALLISQHQIVKAL 68 (1007)
Q Consensus 8 ~~~~~~l~V~Gm~C~~Ca~~IE~~L~~l~GV~~v~Vn~~t~t-------------------v~V~~D~~~~s~~~I~~aL 68 (1007)
.+.+++|- .+|-|-+|..+.+++||.++++=+..+. |.|.|||..++.++|++..
T Consensus 7 ~~~~a~~a------gGCFWg~E~~f~~l~GV~~t~vGYagG~~~nPtY~~Vcsg~tgH~E~V~V~yDp~~iSy~~LL~~F 80 (186)
T PRK13014 7 GMETATFA------GGCFWGVEGVFQHVPGVVSVVSGYSGGHVDNPTYEQVCTGTTGHAEAVQITYDPKQVSYENLLQIF 80 (186)
T ss_pred CccEEEEe------cCCceeeHHHHccCCCEEEEEeeecCCCCCCCChhhhcCCCCCceEEEEEEECCCcCCHHHHHHHH
Confidence 34455554 7899999999999999999998877664 8999999999999998887
Q ss_pred hhc
Q 001837 69 NQA 71 (1007)
Q Consensus 69 ~~a 71 (1007)
-..
T Consensus 81 f~~ 83 (186)
T PRK13014 81 FST 83 (186)
T ss_pred HHh
Confidence 654
No 182
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=82.89 E-value=4.3 Score=49.25 Aligned_cols=36 Identities=14% Similarity=0.075 Sum_probs=31.5
Q ss_pred ecCC--EEeeCCCcccCcEEEEeCCCcccccEEEEece
Q 001837 202 AGTG--EEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGK 237 (1007)
Q Consensus 202 ~rdg--~~V~~~dLv~GDIV~L~~Ge~VPaDgiVl~G~ 237 (1007)
.||| .++|..-||.||||-++||+.-||.+.=.+++
T Consensus 161 fRDGhlm~lP~~LLVeGDiIa~RPGQeafan~~g~~dd 198 (1354)
T KOG4383|consen 161 FRDGHLMELPRILLVEGDIIAFRPGQEAFANCEGFDDD 198 (1354)
T ss_pred hccCeeeecceeEEEeccEEEecCCccccccccccCCC
Confidence 4899 78999999999999999999999987666653
No 183
>PRK05528 methionine sulfoxide reductase A; Provisional
Probab=81.68 E-value=2.8 Score=42.82 Aligned_cols=50 Identities=16% Similarity=0.132 Sum_probs=43.2
Q ss_pred chHHHHHHHHHhCCCCeeEEEEecCCC--------------eEEEEEcCCcccHHHHHHHhhhc
Q 001837 22 SSEVPLIENILKSLEGVKEVSVIVPSR--------------TVIVLHDALLISQHQIVKALNQA 71 (1007)
Q Consensus 22 ~~Ca~~IE~~L~~l~GV~~v~Vn~~t~--------------tv~V~~D~~~~s~~~I~~aL~~a 71 (1007)
.+|-|-+|..+.+++||.++++=+..+ .|.|.|||..+|.++|++..-..
T Consensus 8 gGCFWg~E~~f~~l~GV~~t~vGYagG~~~~p~~~~tgH~E~V~V~yDp~~isy~~LL~~f~~~ 71 (156)
T PRK05528 8 GGCLWGVQAFFKTLPGVIHTEAGRANGRTSTLDGPYDGYAECVKTHFDPRMVSITDLMGYLFEI 71 (156)
T ss_pred cCCchhhHHHHhcCCCEEEEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCcCCHHHHHHHHHHh
Confidence 789999999999999999999866543 48899999999999998877653
No 184
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=81.62 E-value=11 Score=42.02 Aligned_cols=95 Identities=17% Similarity=0.164 Sum_probs=59.4
Q ss_pred EEEEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHH---HHHHhCCCcc--eEEeccCHhHHHHHH
Q 001837 506 GYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQ---AQEQLGNALN--VVHSELLPEDKAKII 580 (1007)
Q Consensus 506 i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~---vA~~lGI~~~--~V~ar~sPeqK~~iV 580 (1007)
+.+-.|+++ .-.+.+-|++.++|++|++.|++++++|+....+... --+++|+... .++. |. ....
T Consensus 5 ~~~D~DGtl----~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~~i~t---s~--~~~~ 75 (279)
T TIGR01452 5 FIFDCDGVL----WLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAEQLFS---SA--LCAA 75 (279)
T ss_pred EEEeCCCce----EcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEec---HH--HHHH
Confidence 344455555 3356778899999999999999999999965443333 3356787522 2221 11 1223
Q ss_pred HHHhhC---C-eEEEEcCCccCHHHHhhCCeeEE
Q 001837 581 NQFKQE---G-KTAMIGDGINDAPALATADIGIS 610 (1007)
Q Consensus 581 ~~Lq~~---G-~VamVGDG~NDa~ALk~ADVGIA 610 (1007)
+.|++. + .|.++|+. .....|+.+++-+.
T Consensus 76 ~~l~~~~~~~~~v~~iG~~-~~~~~l~~~g~~~~ 108 (279)
T TIGR01452 76 RLLRQPPDAPKAVYVIGEE-GLRAELDAAGIRLA 108 (279)
T ss_pred HHHHhhCcCCCEEEEEcCH-HHHHHHHHCCCEEe
Confidence 445542 3 79999985 23456777766543
No 185
>COG0225 MsrA Peptide methionine sulfoxide reductase [Posttranslational modification, protein turnover, chaperones]
Probab=81.34 E-value=3.9 Score=42.20 Aligned_cols=58 Identities=19% Similarity=0.217 Sum_probs=48.4
Q ss_pred ceeEEEEEecCCCCchHHHHHHHHHhCCCCeeEEEEecCCC-------------------eEEEEEcCCcccHHHHHHHh
Q 001837 8 KYQKSYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSR-------------------TVIVLHDALLISQHQIVKAL 68 (1007)
Q Consensus 8 ~~~~~~l~V~Gm~C~~Ca~~IE~~L~~l~GV~~v~Vn~~t~-------------------tv~V~~D~~~~s~~~I~~aL 68 (1007)
.+.+..|- .+|-|-+|+.+.++|||.++.+=+..+ .|.|.|||..++.++|++..
T Consensus 5 ~~~~a~fa------gGCFWg~E~~f~~i~GV~~t~~GYagG~~~nptY~~Vcsg~TgHaE~V~V~yDp~~isy~~LL~~f 78 (174)
T COG0225 5 GMEKAYFA------GGCFWGVEAYFEQIPGVLSTVSGYAGGHTPNPTYEEVCSGTTGHAEAVEVTYDPKVISYEELLEVF 78 (174)
T ss_pred CcEEEEEe------ccCccchHHHHhhCCCeEEEeeeEcCCCCCCCChhhccCCCCCceEEEEEEeCCccccHHHHHHHH
Confidence 34555555 789999999999999999999766554 57899999999999999988
Q ss_pred hhc
Q 001837 69 NQA 71 (1007)
Q Consensus 69 ~~a 71 (1007)
-+.
T Consensus 79 f~i 81 (174)
T COG0225 79 FEI 81 (174)
T ss_pred hee
Confidence 765
No 186
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=80.32 E-value=9.5 Score=42.51 Aligned_cols=108 Identities=19% Similarity=0.263 Sum_probs=70.6
Q ss_pred EEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEEeccCHhH----HHHHHHHHhhC---C
Q 001837 515 VGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSELLPED----KAKIINQFKQE---G 587 (1007)
Q Consensus 515 lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~ar~sPeq----K~~iV~~Lq~~---G 587 (1007)
=|++.-.+.+=|++.++|++|+++|++++.||.....+...+++++.-. ...+.+|++ =......|++. +
T Consensus 16 DGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~---~~~~~~~~~i~TS~~at~~~l~~~~~~~ 92 (269)
T COG0647 16 DGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSL---GGVDVTPDDIVTSGDATADYLAKQKPGK 92 (269)
T ss_pred cCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhh---cCCCCCHHHeecHHHHHHHHHHhhCCCC
Confidence 4677788899999999999999999999999999888888666655310 011223322 11223334443 3
Q ss_pred eEEEEcCCccCHHHHhhCCeeEEeCCCCcHHHHhhcCEEEecCC
Q 001837 588 KTAMIGDGINDAPALATADIGISMGISGSALATETGQVILMSND 631 (1007)
Q Consensus 588 ~VamVGDG~NDa~ALk~ADVGIAmg~~gs~~A~~aADiVLl~~~ 631 (1007)
+|.++|. ..+...|+.+++-+.-. . .+ ...|+|++..|
T Consensus 93 kv~viG~-~~l~~~l~~~G~~~~~~-~-~~---~~~d~Vv~g~d 130 (269)
T COG0647 93 KVYVIGE-EGLKEELEGAGFELVDE-E-EP---ARVDAVVVGLD 130 (269)
T ss_pred EEEEECC-cchHHHHHhCCcEEecc-C-CC---CcccEEEEecC
Confidence 8999994 44567889998877542 1 11 11566666544
No 187
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=79.91 E-value=66 Score=42.97 Aligned_cols=223 Identities=13% Similarity=0.091 Sum_probs=126.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcceEEecCCEEeeCCCcccCcEEEEeCCCcccccEEEEe---ce-eee
Q 001837 165 IIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAIIAGTGEEVDAGEVKLNTVLAVKAGEVIPIDGIVVD---GK-CEV 240 (1007)
Q Consensus 165 ~Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~~~~V~rdg~~V~~~dLv~GDIV~L~~Ge~VPaDgiVl~---G~-~~V 240 (1007)
--++++++.........++..+..++|.+ .. .....+. =++-|....+...|.||-|.++++ |+ +-.
T Consensus 195 ~~~~i~~i~~~~~~~~~~~~~k~~~~L~~-~~------~~~~~v~--V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPa 265 (1054)
T TIGR01657 195 YSLCIVFMSSTSISLSVYQIRKQMQRLRD-MV------HKPQSVI--VIRNGKWVTIASDELVPGDIVSIPRPEEKTMPC 265 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hh------cCCeeEE--EEECCEEEEEEcccCCCCCEEEEecCCCCEecc
Confidence 34555566666777777776666655443 11 1111121 135688999999999999999997 54 666
Q ss_pred ecccCCCCCeeeEec--CCC--eeee--------------------ceEEeeeeEEEEEEEEe-cceEEehh--------
Q 001837 241 DEKTLTGESYPVSKQ--KGS--TVWA--------------------GTINLNGYISVETTAVA-EDCVVAKM-------- 287 (1007)
Q Consensus 241 DES~LTGES~Pv~K~--~g~--~V~a--------------------GT~v~~G~~~~~V~~tG-~~T~~gki-------- 287 (1007)
|=-.|.|+ .-|.=. .|. .+.. +..+..|+....+.... .....+..
T Consensus 266 D~~ll~g~-~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~ 344 (1054)
T TIGR01657 266 DSVLLSGS-CIVNESMLTGESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTS 344 (1054)
T ss_pred eEEEEeCc-EEEecccccCCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCcccc
Confidence 76667774 222211 121 1111 12355566655543321 12223222
Q ss_pred -HHHHHHhhccchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHhcCCchhHHHHHHhhhhhhhccccchhhHHHHHHHHH
Q 001837 288 -AKLVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCAL 366 (1007)
Q Consensus 288 -~~lv~~a~~~ks~lq~~~~~i~~~~~~i~l~ia~l~~l~~~~~~~~~~~~~~~~al~vLv~a~P~aL~l~i~la~~~a~ 366 (1007)
.+++......+. ....+++-+..+..++++++++.++++++.+...... +...+...+..+-.+.|-++|+++..++
T Consensus 345 ~G~i~~~i~~~~~-~~~~~~~~~~~~~~~l~~~a~i~~i~~~~~~~~~~~~-~~~~~l~~l~iiv~~vP~~LP~~~ti~l 422 (1054)
T TIGR01657 345 KGQLVRSILYPKP-RVFKFYKDSFKFILFLAVLALIGFIYTIIELIKDGRP-LGKIILRSLDIITIVVPPALPAELSIGI 422 (1054)
T ss_pred chHHHHHhhCCCC-CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc-HHHHHHHHHHHHHhhcCchHHHHHHHHH
Confidence 234433333333 2344566666677766666766666655554332222 2233333444455667888888888887
Q ss_pred HHHHHcCCcccchhhhhhccCccEEEecCccccccCceEEEEeec
Q 001837 367 TKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQP 411 (1007)
Q Consensus 367 ~~lak~gilvk~~~~lE~Lg~vd~I~fDKTGTLT~g~~~v~~i~~ 411 (1007)
... +.+|.+-.++|.+-...-|-|...+.-+.-
T Consensus 423 ~~~------------~~rL~k~~il~~~~~~ie~lG~v~vicfDK 455 (1054)
T TIGR01657 423 NNS------------LARLKKKGIFCTSPFRINFAGKIDVCCFDK 455 (1054)
T ss_pred HHH------------HHHHHHCCEEEcCcccceecceeeEEEEcC
Confidence 543 456777788898888888888888776543
No 188
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=79.53 E-value=5.6 Score=42.83 Aligned_cols=85 Identities=19% Similarity=0.160 Sum_probs=67.3
Q ss_pred CcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEEec-----------cCHhHHHHHHHHHhhCC-eE
Q 001837 522 DACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSE-----------LLPEDKAKIINQFKQEG-KT 589 (1007)
Q Consensus 522 D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~ar-----------~sPeqK~~iV~~Lq~~G-~V 589 (1007)
.++.|++.+.+++|++.|+.+.+.|+-....+..+.+.+|+. ..|.- -.|+-=+...+.|.-.. .+
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~--~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~~C 162 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLL--DYFDVIVTADDVARGKPAPDIYLLAAERLGVDPEEC 162 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccCh--hhcchhccHHHHhcCCCCCHHHHHHHHHcCCChHHe
Confidence 468899999999999999999999999999999999999987 33321 22443344444443333 79
Q ss_pred EEEcCCccCHHHHhhCCee
Q 001837 590 AMIGDGINDAPALATADIG 608 (1007)
Q Consensus 590 amVGDG~NDa~ALk~ADVG 608 (1007)
+.+.|..+.+.|.++|++-
T Consensus 163 vviEDs~~Gi~Aa~aAGm~ 181 (221)
T COG0637 163 VVVEDSPAGIQAAKAAGMR 181 (221)
T ss_pred EEEecchhHHHHHHHCCCE
Confidence 9999999999999999964
No 189
>PLN02151 trehalose-phosphatase
Probab=79.33 E-value=7.4 Score=44.99 Aligned_cols=55 Identities=13% Similarity=0.082 Sum_probs=40.3
Q ss_pred CCeEEEEEECCEEEEEEEecCc--ccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH
Q 001837 502 GNTIGYIFSGASPVGIFCLSDA--CRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQ 557 (1007)
Q Consensus 502 g~~~i~v~~d~~~lGli~l~D~--lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA 557 (1007)
....+++..|++++-+.---|. +-++++++|++|. .++.+.++||-+......+.
T Consensus 97 ~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 153 (354)
T PLN02151 97 KQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLA-KCFPTAIVSGRCREKVSSFV 153 (354)
T ss_pred CceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHh-cCCCEEEEECCCHHHHHHHc
Confidence 3467777889998865533333 5678999999999 45799999998766665543
No 190
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=79.24 E-value=54 Score=43.48 Aligned_cols=221 Identities=12% Similarity=0.046 Sum_probs=107.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCCcceEEecCCEEeeCCCcccCcEEEEeCCCcccccEEEEe-ce-eeeeccc
Q 001837 167 VFLFTIAEWLESRASHKATAVMSSLMSIAPQKAIIAGTGEEVDAGEVKLNTVLAVKAGEVIPIDGIVVD-GK-CEVDEKT 244 (1007)
Q Consensus 167 l~l~~i~~~le~~~~~k~~~~l~~L~~~~p~~~~V~rdg~~V~~~dLv~GDIV~L~~Ge~VPaDgiVl~-G~-~~VDES~ 244 (1007)
++++.+-.........+..+.-+.+.++.... ..... =++-|-...+...|.+|-|.++++ |+ .-.|=-.
T Consensus 108 ~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~----~~~~~----ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~i 179 (997)
T TIGR01106 108 VVLSAVVIITGCFSYYQEAKSSKIMESFKNMV----PQQAL----VIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRI 179 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC----CCeeE----EEECCEEEEeeHHHCCCCCEEEECCCCEEeeeEEE
Confidence 33333444444445566555555555442211 11111 234588899999999999999996 54 6667666
Q ss_pred CCCCCeeeEec--CCC--eee--ece----------EEeeeeEEEEEEEEecceEEehhH---HHHHHhhccchHHHHHH
Q 001837 245 LTGESYPVSKQ--KGS--TVW--AGT----------INLNGYISVETTAVAEDCVVAKMA---KLVEEAQNSKSRIQRFV 305 (1007)
Q Consensus 245 LTGES~Pv~K~--~g~--~V~--aGT----------~v~~G~~~~~V~~tG~~T~~gki~---~lv~~a~~~ks~lq~~~ 305 (1007)
+.|++.-+.-. .|. .+. .|. .+..|.....=...|.-+..|.-. +.....+..+.. ...+
T Consensus 180 l~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~-~~pl 258 (997)
T TIGR01106 180 ISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGLENG-KTPI 258 (997)
T ss_pred EEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhcccC-CCcH
Confidence 77765333321 121 222 232 244454433322333333334322 222111111111 1223
Q ss_pred HHHHHhHhHHHHHHHHHHHHHHHHhcCCchhHHHHHHhhhhhhhccccchhhHHHHHHHHHHHHHHcCCcccchhhhhhc
Q 001837 306 DKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCALTKAATSGLLIKGGDYLQTL 385 (1007)
Q Consensus 306 ~~i~~~~~~i~l~ia~l~~l~~~~~~~~~~~~~~~~al~vLv~a~P~aL~l~i~la~~~a~~~lak~gilvk~~~~lE~L 385 (1007)
.+....+...+..++++++++.+++... ....+..++...+.....+.|.++|+++..++.... ..|
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~------------~~m 325 (997)
T TIGR01106 259 AIEIEHFIHIITGVAVFLGVSFFILSLI-LGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTA------------KRM 325 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHhhcCCccchHHHHHHHHHHH------------HHH
Confidence 3444455555444544444443333211 111123345555555666778888888877776544 344
Q ss_pred cCccEEEecCccccccCceEEEEe
Q 001837 386 AKVRFMAFDKTGTITRGEFVMSEF 409 (1007)
Q Consensus 386 g~vd~I~fDKTGTLT~g~~~v~~i 409 (1007)
++-.+++-+-...-|-|...+.-+
T Consensus 326 ~~~~ilvk~~~aiE~lg~v~~ic~ 349 (997)
T TIGR01106 326 ARKNCLVKNLEAVETLGSTSTICS 349 (997)
T ss_pred HHCCcEecCcHHHHHhcCCCEEEE
Confidence 555666655555445555555433
No 191
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=79.03 E-value=8.3 Score=42.91 Aligned_cols=77 Identities=23% Similarity=0.274 Sum_probs=54.6
Q ss_pred CcccccHHHHHHHHHHCCCeEEEEcCCCHH----HHHHHHHHhCCCc-ceEEeccCH--------hHHHHHHHHHhhCC-
Q 001837 522 DACRTGAAEAVNQLKSLGIRTAMLTGDNQS----AAMQAQEQLGNAL-NVVHSELLP--------EDKAKIINQFKQEG- 587 (1007)
Q Consensus 522 D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~----tA~~vA~~lGI~~-~~V~ar~sP--------eqK~~iV~~Lq~~G- 587 (1007)
.|.=|++.+..+.+++.|++|++|||-... |...+ ++.|+.. +.++=|-.. +-|...=+.+.+.|
T Consensus 144 ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL-~kaGy~~~~~LiLR~~~D~~~~~av~yKs~~R~~li~eGY 222 (275)
T TIGR01680 144 APALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANL-KKAGYHTWEKLILKDPQDNSAENAVEYKTAARAKLIQEGY 222 (275)
T ss_pred CCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH-HHcCCCCcceeeecCCCCCccchhHHHHHHHHHHHHHcCc
Confidence 456679999999999999999999998754 33333 3568853 345555321 22555556666677
Q ss_pred -eEEEEcCCccCH
Q 001837 588 -KTAMIGDGINDA 599 (1007)
Q Consensus 588 -~VamVGDG~NDa 599 (1007)
+++.+||-.+|.
T Consensus 223 rIv~~iGDq~sDl 235 (275)
T TIGR01680 223 NIVGIIGDQWNDL 235 (275)
T ss_pred eEEEEECCCHHhc
Confidence 789999999996
No 192
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=77.17 E-value=4.6 Score=45.36 Aligned_cols=57 Identities=7% Similarity=0.090 Sum_probs=47.6
Q ss_pred eEEEEEECCEEEEEEEecCc--cc-ccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCC
Q 001837 504 TIGYIFSGASPVGIFCLSDA--CR-TGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNA 563 (1007)
Q Consensus 504 ~~i~v~~d~~~lGli~l~D~--lR-~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~ 563 (1007)
.++++..|++++.- +.+ +| |++.+++++|+++|+++.++|+-....+...-+++|+.
T Consensus 127 kvIvFDLDgTLi~~---~~~v~irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd 186 (301)
T TIGR01684 127 HVVVFDLDSTLITD---EEPVRIRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLD 186 (301)
T ss_pred eEEEEecCCCCcCC---CCccccCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCC
Confidence 46666777777543 333 56 99999999999999999999998889999999999998
No 193
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=76.49 E-value=8.2 Score=39.50 Aligned_cols=86 Identities=23% Similarity=0.171 Sum_probs=64.8
Q ss_pred CcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH---HHh-----CCCcc---------------eEEeccCHhHHHH
Q 001837 522 DACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQ---EQL-----GNALN---------------VVHSELLPEDKAK 578 (1007)
Q Consensus 522 D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA---~~l-----GI~~~---------------~V~ar~sPeqK~~ 578 (1007)
|..++++.+....+++.|.+++=||+-...-|...- .+. +++.- ++..+-.-+.|..
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~Gpv~~sP~~l~~al~rEvi~~~p~~fK~~ 105 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDGPVLLSPDSLFSALHREVISKDPEEFKIA 105 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCCCEEECCcchhhhhhccccccChHHHHHH
Confidence 689999999999999999999999998866554332 222 33321 2333334567999
Q ss_pred HHHHHhhC----C--eEEEEcCCccCHHHHhhCCe
Q 001837 579 IINQFKQE----G--KTAMIGDGINDAPALATADI 607 (1007)
Q Consensus 579 iV~~Lq~~----G--~VamVGDG~NDa~ALk~ADV 607 (1007)
.++.|+.. + .++..|...+|+.|.++++|
T Consensus 106 ~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGi 140 (157)
T PF08235_consen 106 CLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGI 140 (157)
T ss_pred HHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCC
Confidence 99999876 4 57888999999999988776
No 194
>PF01625 PMSR: Peptide methionine sulfoxide reductase; InterPro: IPR002569 Peptide methionine sulphoxide reductase (Msr) reverses the inactivation of many proteins due to the oxidation of critical methionine residues by reducing methionine sulphoxide, Met(O), to methionine []. It is present in most living organisms, and the cognate structural gene belongs to the so-called minimum gene set [, ]. The domains: MsrA and MsrB, reduce different epimeric forms of methionine sulphoxide. This group represent MsrA, the crystal structure of which has been determined in a number of organisms. In Mycobacterium tuberculosis, the MsrA structure has been determined to 1.5 Angstrom resolution []. In contrast to the three catalytic cysteine residues found in previously characterised MsrA structures, M. tuberculosis MsrA represents a class containing only two functional cysteine residues. The overall structure shows no resemblance to the structures of MsrB (IPR002579 from INTERPRO) from other organisms; though the active sites show approximate mirror symmetry. In each case, conserved amino acid motifs mediate the stereo-specific recognition and reduction of the substrate. In a number of pathogenic bacteria including Neisseria gonorrhoeae, the MsrA and MsrB domains are fused; the MsrA being N-terminal to MsrB. This arrangement is reversed in Treponema pallidum. In N. gonorrhoeae and Neisseria meningitidis a thioredoxin domain is fused to the N terminus. This may function to reduce the active sites of the downstream MsrA and MsrB domains. ; GO: 0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor, 0019538 protein metabolic process, 0055114 oxidation-reduction process; PDB: 2GT3_A 1FF3_B 2IEM_A 3E0M_D 2J89_A 3PIN_B 3PIM_B 3PIL_B 2L90_A 3BQF_A ....
Probab=76.06 E-value=6 Score=40.43 Aligned_cols=50 Identities=20% Similarity=0.169 Sum_probs=43.0
Q ss_pred chHHHHHHHHHhCCCCeeEEEEecCCC-------------------eEEEEEcCCcccHHHHHHHhhhc
Q 001837 22 SSEVPLIENILKSLEGVKEVSVIVPSR-------------------TVIVLHDALLISQHQIVKALNQA 71 (1007)
Q Consensus 22 ~~Ca~~IE~~L~~l~GV~~v~Vn~~t~-------------------tv~V~~D~~~~s~~~I~~aL~~a 71 (1007)
.+|-|.+|..+.+++||.++++=+..+ .|.|.|||..++.++|++..-+.
T Consensus 7 ~GCFW~~e~~f~~~~GV~~t~vGYagG~~~~PtY~~v~~g~tgh~E~V~V~yD~~~is~~~Ll~~f~~~ 75 (155)
T PF01625_consen 7 GGCFWGVEAAFRRLPGVISTRVGYAGGTTPNPTYRQVCSGRTGHAEAVRVTYDPSVISYEELLDVFFRI 75 (155)
T ss_dssp ESSHHHHHHHHHTSTTEEEEEEEEESSSSSS--HHHHHTTTTT-EEEEEEEEETTTS-HHHHHHHHHHH
T ss_pred cCCCeEhHHHHhhCCCEEEEEecccCCCCCCCcceeeecCCCCCeEEEEEEECCCcccHHHHHHHHHHh
Confidence 689999999999999999999877655 67899999999999998887654
No 195
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=74.84 E-value=28 Score=44.59 Aligned_cols=181 Identities=15% Similarity=0.155 Sum_probs=102.1
Q ss_pred ccCcEEEEeCCCcccccEEEEe-ce-eeeecccCCCCCeeeEecC--CC--e--eeeceEEeeeeEEEEEEEEecceEEe
Q 001837 214 KLNTVLAVKAGEVIPIDGIVVD-GK-CEVDEKTLTGESYPVSKQK--GS--T--VWAGTINLNGYISVETTAVAEDCVVA 285 (1007)
Q Consensus 214 v~GDIV~L~~Ge~VPaDgiVl~-G~-~~VDES~LTGES~Pv~K~~--g~--~--V~aGT~v~~G~~~~~V~~tG~~T~~g 285 (1007)
+-|....+...|.+|=|.++++ |+ .-+|=-.+.|+..-+.-.. |. . -..|..+..|+....-...+.-+..|
T Consensus 98 Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES~PV~K~~~~~v~aGT~v~~G~~~~~V~~tG 177 (755)
T TIGR01647 98 RDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKKTGDIAYSGSTVKQGEAEAVVTATG 177 (755)
T ss_pred ECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCccceEeccCCeeeccCEEEccEEEEEEEEcC
Confidence 4588899999999999998886 55 6677767777644433211 22 1 24677888888765544455545544
Q ss_pred hh---HHHHHHhhccchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHhcCCchhHHHHHHhhhhhhhccccchhhHHHHH
Q 001837 286 KM---AKLVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVT 362 (1007)
Q Consensus 286 ki---~~lv~~a~~~ks~lq~~~~~i~~~~~~i~l~ia~l~~l~~~~~~~~~~~~~~~~al~vLv~a~P~aL~l~i~la~ 362 (1007)
.- .+.....+..+.+ ...+++....+...++.++++++++.+++........+..++...+...-.+.|.++|+++
T Consensus 178 ~~T~~g~i~~lv~~~~~~-~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~vlv~a~P~~Lp~~~ 256 (755)
T TIGR01647 178 MNTFFGKAAALVQSTETG-SGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESFREGLQFALVLLVGGIPIAMPAVL 256 (755)
T ss_pred CccHHHHHHHHhhccCCC-CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCcchHHHH
Confidence 32 2233222222221 2245666666665555555554444444332111222445666667777788888899888
Q ss_pred HHHHHHHHHcCCcccchhhhhhccCccEEEecCccccccCceEEE
Q 001837 363 YCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMS 407 (1007)
Q Consensus 363 ~~a~~~lak~gilvk~~~~lE~Lg~vd~I~fDKTGTLT~g~~~v~ 407 (1007)
..++.... .++++-.+++-+-.--=|-+.+.+.
T Consensus 257 ~~~la~g~------------~r~ak~gilvk~l~alE~lg~v~~i 289 (755)
T TIGR01647 257 SVTMAVGA------------AELAKKKAIVTRLTAIEELAGMDIL 289 (755)
T ss_pred HHHHHHHH------------HHHHhCCeEEcccHHHHhccCCcEE
Confidence 88876443 4455555555443322233444443
No 196
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=74.35 E-value=7.4 Score=40.77 Aligned_cols=85 Identities=19% Similarity=0.327 Sum_probs=58.4
Q ss_pred ccccHHHHHHHHHHCCCeEEEEcCCC-----HHHH----------HHHHHHhCCCc-ceEEeccCHhH--------HHHH
Q 001837 524 CRTGAAEAVNQLKSLGIRTAMLTGDN-----QSAA----------MQAQEQLGNAL-NVVHSELLPED--------KAKI 579 (1007)
Q Consensus 524 lR~~a~eaI~~Lr~aGIkv~mlTGD~-----~~tA----------~~vA~~lGI~~-~~V~ar~sPeq--------K~~i 579 (1007)
+.+++.+++..|+++|++++|+|-=+ ..+. ..+-++.|+.. ...++.-.|++ ...+
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv~id~i~~Cph~p~~~c~cRKP~~gm~ 111 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGVKIDGILYCPHHPEDNCDCRKPKPGML 111 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCCccceEEECCCCCCCCCcccCCChHHH
Confidence 57899999999999999999999521 1111 12223334332 24556666664 3445
Q ss_pred HHHHhhCC----eEEEEcCCccCHHHHhhCCee
Q 001837 580 INQFKQEG----KTAMIGDGINDAPALATADIG 608 (1007)
Q Consensus 580 V~~Lq~~G----~VamVGDG~NDa~ALk~ADVG 608 (1007)
.+.+++.+ ...||||-..|..+-..|++.
T Consensus 112 ~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 112 LSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred HHHHHHhCCCccceEEecCcHHHHHHHHHCCCC
Confidence 66666654 589999999999999988886
No 197
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=74.15 E-value=77 Score=38.61 Aligned_cols=84 Identities=14% Similarity=0.120 Sum_probs=61.6
Q ss_pred ccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-hCCCcceEEe-------------c------cCHhHHHHHHHHH
Q 001837 524 CRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQ-LGNALNVVHS-------------E------LLPEDKAKIINQF 583 (1007)
Q Consensus 524 lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~-lGI~~~~V~a-------------r------~sPeqK~~iV~~L 583 (1007)
+++++.+ .+++.|- ++++|+-...-++.+|++ +|++ .|.+ + +.=++|++-++..
T Consensus 111 l~~~a~~---~~~~~g~-~vvVSASp~~~Vepfa~~~LGid--~VIgTeLev~~~G~~TG~i~g~~~c~Ge~Kv~rl~~~ 184 (497)
T PLN02177 111 VHPETWR---VFNSFGK-RYIITASPRIMVEPFVKTFLGAD--KVLGTELEVSKSGRATGFMKKPGVLVGDHKRDAVLKE 184 (497)
T ss_pred cCHHHHH---HHHhCCC-EEEEECCcHHHHHHHHHHcCCCC--EEEecccEECcCCEEeeeecCCCCCccHHHHHHHHHH
Confidence 5666555 4456775 499999999999999987 8988 3311 1 2235688888744
Q ss_pred hhCC-eEEEEcCCccCHHHHhhCCeeEEeCC
Q 001837 584 KQEG-KTAMIGDGINDAPALATADIGISMGI 613 (1007)
Q Consensus 584 q~~G-~VamVGDG~NDa~ALk~ADVGIAmg~ 613 (1007)
.... ...+-||..+|.|+|+.||-...++.
T Consensus 185 ~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 185 FGDALPDLGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred hCCCCceEEEECCccHHHHHHhCCccEEeCC
Confidence 3222 34788999999999999999999973
No 198
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=72.27 E-value=3.9 Score=41.68 Aligned_cols=76 Identities=16% Similarity=0.111 Sum_probs=51.0
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc---eEEecc----CHhHH--HHHHHHHhhCC-eEEEE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN---VVHSEL----LPEDK--AKIINQFKQEG-KTAMI 592 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~---~V~ar~----sPeqK--~~iV~~Lq~~G-~VamV 592 (1007)
++.|++.++++ ++.++|.-+......+.+.+|+..- .+.+.. .|.-. ..+.+.+.-.. .++||
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~l~v 162 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRVLMV 162 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHeEeE
Confidence 47899999998 3789999888888888999998621 122222 23222 33333333222 69999
Q ss_pred cCCccCHHHHhhC
Q 001837 593 GDGINDAPALATA 605 (1007)
Q Consensus 593 GDG~NDa~ALk~A 605 (1007)
||...|..+-+++
T Consensus 163 gD~~~Di~~A~~~ 175 (175)
T TIGR01493 163 AAHQWDLIGARKF 175 (175)
T ss_pred ecChhhHHHHhcC
Confidence 9999998876653
No 199
>TIGR00401 msrA methionine-S-sulfoxide reductase. This model describes peptide methionine sulfoxide reductase (MsrA), a repair enzyme for proteins that have been inactivated by oxidation. The enzyme from E. coli is coextensive with this model and has enzymatic activity. However, in all completed genomes in which this module is present, a second protein module, described in TIGR00357, is also found, and in several cases as part of the same polypeptide chain: N-terminal to this module in Helicobacter pylori and Haemophilus influenzae (as in PilB of Neisseria gonorrhoeae) but C-terminal to it in Treponema pallidum. PilB, containing both domains, has been shown to be important for the expression of adhesins in certain pathogens.
Probab=72.12 E-value=7.8 Score=39.35 Aligned_cols=50 Identities=18% Similarity=0.133 Sum_probs=42.4
Q ss_pred chHHHHHHHHHhCCCCeeEEEEecCC-------------------CeEEEEEcCCcccHHHHHHHhhhc
Q 001837 22 SSEVPLIENILKSLEGVKEVSVIVPS-------------------RTVIVLHDALLISQHQIVKALNQA 71 (1007)
Q Consensus 22 ~~Ca~~IE~~L~~l~GV~~v~Vn~~t-------------------~tv~V~~D~~~~s~~~I~~aL~~a 71 (1007)
.+|-|-+|..+..++||.++++=+.. +.|.|.|||..++.++|++..-..
T Consensus 7 gGCFWg~E~~f~~~~GV~~t~~GYagG~~~~PtY~~Vc~g~tgh~E~V~V~yDp~~is~~~Ll~~f~~~ 75 (149)
T TIGR00401 7 GGCFWGVEKYFWLIPGVYSTAVGYTGGYTPNPTYEEVCSGDTGHAEAVQVTYDPKVISYEELLDVFWEI 75 (149)
T ss_pred cCCchhhHHHHhcCCCEEEEEEeeCCCCCCCCChhhcccCCCCceEEEEEEECCCcCcHHHHHHHHHHh
Confidence 68999999999999999999975443 367899999999999998877553
No 200
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=71.15 E-value=7.6 Score=41.34 Aligned_cols=38 Identities=24% Similarity=0.260 Sum_probs=35.8
Q ss_pred ccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCC
Q 001837 526 TGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNA 563 (1007)
Q Consensus 526 ~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~ 563 (1007)
+.++++|++|++.|++++++||-....+..+.+++|+.
T Consensus 19 ~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 19 QPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 44899999999999999999999999999999999986
No 201
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=70.10 E-value=2.1e+02 Score=36.75 Aligned_cols=115 Identities=17% Similarity=0.149 Sum_probs=64.6
Q ss_pred ccCcEEEEeCCCcccccEEEEe-ce-eeeecccCCCCCeeeEe-cCCCe----eeeceEEeeeeEEEEEEEEecceEE--
Q 001837 214 KLNTVLAVKAGEVIPIDGIVVD-GK-CEVDEKTLTGESYPVSK-QKGST----VWAGTINLNGYISVETTAVAEDCVV-- 284 (1007)
Q Consensus 214 v~GDIV~L~~Ge~VPaDgiVl~-G~-~~VDES~LTGES~Pv~K-~~g~~----V~aGT~v~~G~~~~~V~~tG~~T~~-- 284 (1007)
.-|....+...+.+|-|.+++. |+ .-+|=-.+.|++.--+- -.|.. ...|..|..|.....=.-...-+..
T Consensus 249 r~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g~~~vdes~lTGEs~Pv~k~~Gd~V~aGt~~~~G~~~i~V~~~g~ 328 (741)
T PRK11033 249 RDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSPFASFDESALTGESIPVERATGEKVPAGATSVDRLVTLEVLSEPG 328 (741)
T ss_pred ECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEECcEEeecccccCCCCCEecCCCCeeccCCEEcCceEEEEEEeccc
Confidence 4688888999999999998885 65 77887778886432111 11322 2568999988864321111122222
Q ss_pred -ehhHHHHHHhhccchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHH
Q 001837 285 -AKMAKLVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIA 329 (1007)
Q Consensus 285 -gki~~lv~~a~~~ks~lq~~~~~i~~~~~~i~l~ia~l~~l~~~~ 329 (1007)
..+.+.+...++.... ...+.+++..+......+.++++++.++
T Consensus 329 ~s~l~~I~~lv~~a~~~-k~~~q~~~d~~a~~~~~~v~~~a~~~~~ 373 (741)
T PRK11033 329 ASAIDRILHLIEEAEER-RAPIERFIDRFSRIYTPAIMLVALLVIL 373 (741)
T ss_pred cCHHHHHHHHHHHhhcc-CChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2233333333322221 2346677777766665555555554443
No 202
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=68.18 E-value=8 Score=43.52 Aligned_cols=57 Identities=9% Similarity=0.067 Sum_probs=45.6
Q ss_pred eEEEEEECCEEEEEEEecCc--cc-ccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCC
Q 001837 504 TIGYIFSGASPVGIFCLSDA--CR-TGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNA 563 (1007)
Q Consensus 504 ~~i~v~~d~~~lGli~l~D~--lR-~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~ 563 (1007)
.++.+..|++++-- +.+ +| |++.+++++|+++|+++.++|+-+...+..+.+.+|+.
T Consensus 129 ~~i~~D~D~TL~~~---~~~v~irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~ 188 (303)
T PHA03398 129 HVIVFDLDSTLITD---EEPVRIRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLE 188 (303)
T ss_pred cEEEEecCCCccCC---CCccccCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCC
Confidence 34556666666443 444 45 89999999999999999999987788889999999997
No 203
>cd00371 HMA Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones. HMA domain contains two cysteine residues that are important in binding and transfer of metal ions, such as copper, cadmium, cobalt and zinc. In the case of copper, stoichiometry of binding is one Cu+ ion per binding domain. Repeats of the HMA domain in copper chaperone has been associated with Menkes/Wilson disease due to binding of multiple copper ions.
Probab=67.81 E-value=30 Score=24.77 Aligned_cols=42 Identities=33% Similarity=0.455 Sum_probs=35.7
Q ss_pred EecCCCCchHHHHHHHHHhCCCCeeEEEEecCCCeEEEEEcC
Q 001837 15 DVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDA 56 (1007)
Q Consensus 15 ~V~Gm~C~~Ca~~IE~~L~~l~GV~~v~Vn~~t~tv~V~~D~ 56 (1007)
.+.++.|..|...++..+...+++.....++......+.++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 44 (63)
T cd00371 3 SVEGMTCAGCVSKIEKALEKLPGVESVEVDLETGKATVEYDP 44 (63)
T ss_pred eECCeEcHHHHHHHHHHHhcCCCEeEEEEEccCCEEEEEECC
Confidence 467889999999999999999998888888888877777754
No 204
>PRK05550 bifunctional methionine sulfoxide reductase B/A protein; Provisional
Probab=67.02 E-value=8.4 Score=43.11 Aligned_cols=50 Identities=24% Similarity=0.155 Sum_probs=43.4
Q ss_pred chHHHHHHHHHhCCCCeeEEEEecCCC-------------------eEEEEEcCCcccHHHHHHHhhhc
Q 001837 22 SSEVPLIENILKSLEGVKEVSVIVPSR-------------------TVIVLHDALLISQHQIVKALNQA 71 (1007)
Q Consensus 22 ~~Ca~~IE~~L~~l~GV~~v~Vn~~t~-------------------tv~V~~D~~~~s~~~I~~aL~~a 71 (1007)
..|-|.+|..+..++||.++++=+..+ .|.|.|||..++.++|++..-+.
T Consensus 134 gGCFWg~E~~F~~~~GV~~t~vGYagG~~~nPtY~~VcsG~tgH~EaV~V~yDp~~isy~~LL~~F~~~ 202 (283)
T PRK05550 134 GGCFWGVEYYFKKLPGVLSVESGYTGGDTKNPTYEQVCSGTTGHAEAVRVEFDPAKISYETLLKVFFEI 202 (283)
T ss_pred cCCchhhhhhHhhCcCEEEEEEeeCCCCCCCCChhhcccCCCCCeEEEEEEECCccCCHHHHHHHHHhh
Confidence 789999999999999999999876654 38899999999999998877553
No 205
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=65.32 E-value=1.8e+02 Score=37.99 Aligned_cols=191 Identities=11% Similarity=0.028 Sum_probs=107.5
Q ss_pred eeCCCcccCcEEEEeCCCcccccEEEEece--------eeeecccCCCCCeeeEec---CCCeeeeceE-----------
Q 001837 208 VDAGEVKLNTVLAVKAGEVIPIDGIVVDGK--------CEVDEKTLTGESYPVSKQ---KGSTVWAGTI----------- 265 (1007)
Q Consensus 208 V~~~dLv~GDIV~L~~Ge~VPaDgiVl~G~--------~~VDES~LTGES~Pv~K~---~g~~V~aGT~----------- 265 (1007)
+++.=++.|-...|...|.||-|.+++... +.++-+.++-||+.---. ....+..|+.
T Consensus 250 ~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g~civNEsmLTGESVPv~K~~l~~~~~~~~~~~~~~~~ 329 (1140)
T KOG0208|consen 250 CPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISGDCIVNESMLTGESVPVTKTPLPMGTDSLDSITISMST 329 (1140)
T ss_pred ceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeCcEEeecccccCCcccccccCCccccccCcCeeechhh
Confidence 556667889999999999999999999862 466667777777653110 0122332332
Q ss_pred -----EeeeeEEEEEEEEecceEEehhHHH---------HHHhhccchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHhc
Q 001837 266 -----NLNGYISVETTAVAEDCVVAKMAKL---------VEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALG 331 (1007)
Q Consensus 266 -----v~~G~~~~~V~~tG~~T~~gki~~l---------v~~a~~~ks~lq~~~~~i~~~~~~i~l~ia~l~~l~~~~~~ 331 (1007)
+..|.-...+-..+....++...+. +..--.+|+. ...+-+=+-.|...+.+++++.+++..+..
T Consensus 330 ~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPkP~-~fkfyrds~~fi~~l~~ia~~gfiy~~i~l 408 (1140)
T KOG0208|consen 330 NSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPKPV-NFKFYRDSFKFILFLVIIALIGFIYTAIVL 408 (1140)
T ss_pred cCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCCCc-ccHHHHHHHHHHHHHHHHHHHHHHHHhHhH
Confidence 2236666666667777666655432 2222222222 222233333333334444444433322221
Q ss_pred CCchhHHHHHHhhhhhhhccccchhhHHHHHHHHHHHHHHcCCcccchhhhhhccCccEEEecCccccccCceEEEEeec
Q 001837 332 VSNHKQWFHLALVVLVSACPCALILSTPVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEFQP 411 (1007)
Q Consensus 332 ~~~~~~~~~~al~vLv~a~P~aL~l~i~la~~~a~~~lak~gilvk~~~~lE~Lg~vd~I~fDKTGTLT~g~~~v~~i~~ 411 (1007)
. -....+...+.-.+-.+-...|-++|.++..+... +.-+|.+-...|.--+--=.-|+..+.-+.-
T Consensus 409 ~-~~g~~~~~iiirsLDliTi~VPPALPAaltvG~~~------------a~~RLkkk~IfCisP~rIn~~G~i~~~cFDK 475 (1140)
T KOG0208|consen 409 N-LLGVPLKTIIIRSLDLITIVVPPALPAALTVGIIY------------AQSRLKKKGIFCISPQRINLCGKLNLVCFDK 475 (1140)
T ss_pred H-HcCCCHHHHhhhhhcEEEEecCCCchhhhhHHHHH------------HHHHHHhcCeEEcCccceeecceeeEEEEcC
Confidence 0 00001112222222234555677888888888754 4567888899999888777788888877654
Q ss_pred C
Q 001837 412 L 412 (1007)
Q Consensus 412 ~ 412 (1007)
.
T Consensus 476 T 476 (1140)
T KOG0208|consen 476 T 476 (1140)
T ss_pred C
Confidence 3
No 206
>PTZ00174 phosphomannomutase; Provisional
Probab=64.31 E-value=33 Score=37.42 Aligned_cols=80 Identities=18% Similarity=0.126 Sum_probs=53.8
Q ss_pred eEEEEEECCEEEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCC--c--------------ceE
Q 001837 504 TIGYIFSGASPVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNA--L--------------NVV 567 (1007)
Q Consensus 504 ~~i~v~~d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~--~--------------~~V 567 (1007)
..+++-.|++++. =..++.+.++++|+++++.|+++++.||.+........+..+.. . ..+
T Consensus 6 klia~DlDGTLL~---~~~~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l~~~~~~~~~~~I~~NGa~I~~~~~~i 82 (247)
T PTZ00174 6 TILLFDVDGTLTK---PRNPITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQLGEDVLEDFDYVFSENGLVAYKDGELF 82 (247)
T ss_pred eEEEEECcCCCcC---CCCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHhhhhhcccCeEEeCCceEEEECCeEE
Confidence 4555666776651 12247888999999999999999999999988766554432111 0 034
Q ss_pred Eec-----cCHhHHHHHHHHHhhC
Q 001837 568 HSE-----LLPEDKAKIINQFKQE 586 (1007)
Q Consensus 568 ~ar-----~sPeqK~~iV~~Lq~~ 586 (1007)
+.+ +.++.-.++++.+++.
T Consensus 83 ~~~~i~~~l~~~~~~~i~~~~~~~ 106 (247)
T PTZ00174 83 HSQSILKFLGEEKLKKFINFCLRY 106 (247)
T ss_pred EEEcchhcCCHHHHHHHHHHHHHH
Confidence 444 3467777888877654
No 207
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=64.12 E-value=6.4 Score=40.68 Aligned_cols=88 Identities=16% Similarity=0.162 Sum_probs=65.8
Q ss_pred ccccHHHHHHHHHHCCCeEEEEcCCCHH----HHHHHHHHhCCCc--ceEEeccCHh-HHHHHHHHHhhCCeEEEEcCCc
Q 001837 524 CRTGAAEAVNQLKSLGIRTAMLTGDNQS----AAMQAQEQLGNAL--NVVHSELLPE-DKAKIINQFKQEGKTAMIGDGI 596 (1007)
Q Consensus 524 lR~~a~eaI~~Lr~aGIkv~mlTGD~~~----tA~~vA~~lGI~~--~~V~ar~sPe-qK~~iV~~Lq~~G~VamVGDG~ 596 (1007)
+++-+++.|..=++.|-+++.+||..+. ++..+|+...|.. +.+|+.-.|. .+..-...+|+.+.-..-||..
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv~f~Gdk~k~~qy~Kt~~i~~~~~~IhYGDSD 194 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPVIFAGDKPKPGQYTKTQWIQDKNIRIHYGDSD 194 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcceeeccCCCCcccccccHHHHhcCceEEecCCc
Confidence 5677889999999999999999997654 4556667767653 2677766551 2233345666778788999999
Q ss_pred cCHHHHhhCCe-eEEe
Q 001837 597 NDAPALATADI-GISM 611 (1007)
Q Consensus 597 NDa~ALk~ADV-GIAm 611 (1007)
||.-|-+.|++ ||-+
T Consensus 195 ~Di~AAkeaG~RgIRi 210 (237)
T COG3700 195 NDITAAKEAGARGIRI 210 (237)
T ss_pred hhhhHHHhcCccceeE
Confidence 99999999987 6754
No 208
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=62.82 E-value=35 Score=37.53 Aligned_cols=117 Identities=20% Similarity=0.263 Sum_probs=67.1
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcc--eEEecc-------------CH----hHHHH-----
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALN--VVHSEL-------------LP----EDKAK----- 578 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~--~V~ar~-------------sP----eqK~~----- 578 (1007)
.+|+++.+.++.|.+.+|.+.+.|+-=......+-++.|...+ .|.++. .| --|-.
T Consensus 90 ~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~~~l~~ 169 (246)
T PF05822_consen 90 MLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKNESALED 169 (246)
T ss_dssp -B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HHHHHHTT
T ss_pred hhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEeeeEEECCcceEeecCCCceEEeeCCcccccC
Confidence 4799999999999999999999997666666666677676544 222221 01 11211
Q ss_pred --HHHHHhhCCeEEEEcCCccCHHHHhhC---CeeEEeC--CCCcH----HHHhhcCEEEecCCcchHHHHH
Q 001837 579 --IINQFKQEGKTAMIGDGINDAPALATA---DIGISMG--ISGSA----LATETGQVILMSNDIRKVPEAI 639 (1007)
Q Consensus 579 --iV~~Lq~~G~VamVGDG~NDa~ALk~A---DVGIAmg--~~gs~----~A~~aADiVLl~~~l~~I~~lI 639 (1007)
.-+.++.+..|+..||..-|+.|-.-. +.-+.+| ....+ .-+++=||||++|.--.++..|
T Consensus 170 ~~~~~~~~~R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv~D~tm~v~~~i 241 (246)
T PF05822_consen 170 SPYFKQLKKRTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLVDDQTMDVPNAI 241 (246)
T ss_dssp HHHHHCTTT--EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEET--B-HHHHHH
T ss_pred chHHHHhccCCcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEECCCCchHHHHH
Confidence 123344444799999999999886554 3333333 22223 3345789999999766666554
No 209
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=62.46 E-value=73 Score=34.00 Aligned_cols=157 Identities=17% Similarity=0.223 Sum_probs=84.4
Q ss_pred CcccCcEEEEeCCCcccccEEEEe-ce-eeeecccCC-CCCeeeEec--CCCee----e-----eceEEeeeeEEEEEEE
Q 001837 212 EVKLNTVLAVKAGEVIPIDGIVVD-GK-CEVDEKTLT-GESYPVSKQ--KGSTV----W-----AGTINLNGYISVETTA 277 (1007)
Q Consensus 212 dLv~GDIV~L~~Ge~VPaDgiVl~-G~-~~VDES~LT-GES~Pv~K~--~g~~V----~-----aGT~v~~G~~~~~V~~ 277 (1007)
-+.-|....+...|.+|-|.++++ |+ +-.|=-.|. |... +.-. .|... . .|..+..|.....=..
T Consensus 38 v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g~~~-vd~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~ 116 (230)
T PF00122_consen 38 VIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESGSAY-VDESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWG 116 (230)
T ss_dssp EEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESSEEE-EECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEE
T ss_pred EEeccccccchHhhccceeeeecccccccccCccceeccccc-cccccccccccccccccccccccchhhcccccccccc
Confidence 344589999999999999998885 44 444444444 3211 1110 12211 2 7788888876553333
Q ss_pred EecceEEehhH---HHHHHhhccchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHhcCC-chhHHHHHHhhhhhhhcccc
Q 001837 278 VAEDCVVAKMA---KLVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVS-NHKQWFHLALVVLVSACPCA 353 (1007)
Q Consensus 278 tG~~T~~gki~---~lv~~a~~~ks~lq~~~~~i~~~~~~i~l~ia~l~~l~~~~~~~~-~~~~~~~~al~vLv~a~P~a 353 (1007)
.+.-+..|.-. ++.......+. ....+++....+...++.+.++++++.+++... +....+...+...+...-..
T Consensus 117 ~~~Vi~tG~~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~ 195 (230)
T PF00122_consen 117 IGVVIATGSDTKLGRILQLVSKSES-KKSPLERKLNKIAKILIIIILAIAILVFIIWFFNDSGISFFKSFLFAISLLIVL 195 (230)
T ss_dssp EEEEEE-GGGSHHHHHHHHHHTSCS-S-THHHHHHHHHHHHHHHHHHHHHHHHHHHCHTGSTTCHCCHHHHHHHHHHHHH
T ss_pred ccccceeeecccccccccccccccc-cchhhhhhhHHHHHHHHhcccccchhhhccceecccccccccccccccceeeee
Confidence 34444444332 22333222222 234566766666666665655555555544432 22333445566666667777
Q ss_pred chhhHHHHHHHHHHHHH
Q 001837 354 LILSTPVVTYCALTKAA 370 (1007)
Q Consensus 354 L~l~i~la~~~a~~~la 370 (1007)
+|.++|+++..+.....
T Consensus 196 ~P~~l~~~~~~~~~~~~ 212 (230)
T PF00122_consen 196 IPCALPLALPLSLAIAA 212 (230)
T ss_dssp S-TTHHHHHHHHHHHHH
T ss_pred cccceeehHHHHHHHHH
Confidence 88888888888776554
No 210
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=60.83 E-value=48 Score=32.40 Aligned_cols=87 Identities=10% Similarity=0.131 Sum_probs=54.6
Q ss_pred EEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEEeccCHhHHHHHHHHHhhCCeEEEEcCCcc
Q 001837 518 FCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEGKTAMIGDGIN 597 (1007)
Q Consensus 518 i~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~ar~sPeqK~~iV~~Lq~~G~VamVGDG~N 597 (1007)
|.+-+++.++..+.+++ |+.+.+...-.........+ +.+ .++.+..+.=-..+++.+.....|...|-|.|
T Consensus 1 ili~~~~~~~~~~~l~~----~~~v~~~~~~~~~~~~~~l~--~~d--~ii~~~~~~~~~~~l~~~~~Lk~I~~~~~G~d 72 (133)
T PF00389_consen 1 ILITDPLPDEEIERLEE----GFEVEFCDSPSEEELAERLK--DAD--AIIVGSGTPLTAEVLEAAPNLKLISTAGAGVD 72 (133)
T ss_dssp EEESSS-SHHHHHHHHH----TSEEEEESSSSHHHHHHHHT--TES--EEEESTTSTBSHHHHHHHTT-SEEEESSSSCT
T ss_pred eEEeccCCHHHHHHHHC----CceEEEeCCCCHHHHHHHhC--CCe--EEEEcCCCCcCHHHHhccceeEEEEEcccccC
Confidence 35667777766666666 88888877444443222222 233 56666555334566677766667888899988
Q ss_pred --CHHHHhhCCeeEEeC
Q 001837 598 --DAPALATADIGISMG 612 (1007)
Q Consensus 598 --Da~ALk~ADVGIAmg 612 (1007)
|..++++-+|-++-.
T Consensus 73 ~id~~~a~~~gI~V~n~ 89 (133)
T PF00389_consen 73 NIDLEAAKERGIPVTNV 89 (133)
T ss_dssp TB-HHHHHHTTSEEEE-
T ss_pred cccHHHHhhCeEEEEEe
Confidence 788999999988754
No 211
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=57.88 E-value=36 Score=38.81 Aligned_cols=85 Identities=16% Similarity=0.175 Sum_probs=55.7
Q ss_pred EEEEecCcccccHHHHHHHHHHC----CCeEEEEcCCC---HH-HHHHHHHHhCCCcc--eEEeccCHhHHHHHHHHHhh
Q 001837 516 GIFCLSDACRTGAAEAVNQLKSL----GIRTAMLTGDN---QS-AAMQAQEQLGNALN--VVHSELLPEDKAKIINQFKQ 585 (1007)
Q Consensus 516 Gli~l~D~lR~~a~eaI~~Lr~a----GIkv~mlTGD~---~~-tA~~vA~~lGI~~~--~V~ar~sPeqK~~iV~~Lq~ 585 (1007)
|++.-.+++-+++.++++.|+.. |+++..+|-.. .. .+..+.+++|+..+ .|+... ..+...+++
T Consensus 9 GvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~~~~~i~~s~-----~~~~~ll~~ 83 (321)
T TIGR01456 9 GVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDVSPLQVIQSH-----SPYKSLVNK 83 (321)
T ss_pred CceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCCCHHHHHhhh-----HHHHHHHHH
Confidence 66677788999999999999998 99999999664 33 35666688888632 222222 222333333
Q ss_pred CC-eEEEEcCCccCHHHHhhCC
Q 001837 586 EG-KTAMIGDGINDAPALATAD 606 (1007)
Q Consensus 586 ~G-~VamVGDG~NDa~ALk~AD 606 (1007)
.+ .|.++|.+. -...++.++
T Consensus 84 ~~~~v~viG~~~-~~~~l~~~G 104 (321)
T TIGR01456 84 YEKRILAVGTGS-VRGVAEGYG 104 (321)
T ss_pred cCCceEEEeChH-HHHHHHHcC
Confidence 33 688888764 344555444
No 212
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=56.29 E-value=25 Score=30.81 Aligned_cols=55 Identities=18% Similarity=0.328 Sum_probs=35.7
Q ss_pred HHHHHHHhhCC-eEEEEcCC-ccCHHHHhhCCe-eEEeCCCCc---HHH---HhhcCEEEecCCcch
Q 001837 577 AKIINQFKQEG-KTAMIGDG-INDAPALATADI-GISMGISGS---ALA---TETGQVILMSNDIRK 634 (1007)
Q Consensus 577 ~~iV~~Lq~~G-~VamVGDG-~NDa~ALk~ADV-GIAmg~~gs---~~A---~~aADiVLl~~~l~~ 634 (1007)
..+.+.+.... .++||||. ..|..+-+++++ +|.+. +|. +.. ...+|+|+ ++|..
T Consensus 11 ~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~-tG~~~~~~~~~~~~~pd~vv--~~l~e 74 (75)
T PF13242_consen 11 EQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVL-TGVYSPEDLEKAEHKPDYVV--DDLKE 74 (75)
T ss_dssp HHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEES-SSSSCCCGHHHSSSTTSEEE--SSGGG
T ss_pred HHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEEC-CCCCCHHHHhccCCCCCEEE--CCHHh
Confidence 33444443333 79999999 999999999997 34443 332 222 25789987 66654
No 213
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=56.12 E-value=58 Score=36.98 Aligned_cols=43 Identities=23% Similarity=0.374 Sum_probs=29.0
Q ss_pred cCcccccHHHHHHHHHHCCCeE---EEEcCCCHHHHHH------HHHHhCCC
Q 001837 521 SDACRTGAAEAVNQLKSLGIRT---AMLTGDNQSAAMQ------AQEQLGNA 563 (1007)
Q Consensus 521 ~D~lR~~a~eaI~~Lr~aGIkv---~mlTGD~~~tA~~------vA~~lGI~ 563 (1007)
.++++.+.++.|+++++.|+++ +++-||++..... .|+++||.
T Consensus 13 A~~i~~~lk~~i~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~ 64 (301)
T PRK14194 13 AARVLAQVREDVRTLKAAGIEPALAVILVGNDPASQVYVRNKILRAEEAGIR 64 (301)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCE
Confidence 4567777888888887777764 5556777766543 45666764
No 214
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=56.02 E-value=4.4e+02 Score=34.77 Aligned_cols=180 Identities=17% Similarity=0.124 Sum_probs=90.8
Q ss_pred CcEEEEeCCCcccccEEEEe-ce-eeeecccCCCCCeeeEec--CCC--ee--eece-------------EEeeeeEEEE
Q 001837 216 NTVLAVKAGEVIPIDGIVVD-GK-CEVDEKTLTGESYPVSKQ--KGS--TV--WAGT-------------INLNGYISVE 274 (1007)
Q Consensus 216 GDIV~L~~Ge~VPaDgiVl~-G~-~~VDES~LTGES~Pv~K~--~g~--~V--~aGT-------------~v~~G~~~~~ 274 (1007)
|....|...|.+|=|.++++ |+ .-+|=-.+.|+..-+.=. .|. .| ..|. .+..|+....
T Consensus 173 g~~~~I~~~eLvpGDiV~l~~Gd~IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~ 252 (902)
T PRK10517 173 NGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVS 252 (902)
T ss_pred CeEEEEEHHhCCCCCEEEECCCCEEeeeEEEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEee
Confidence 56899999999999999986 55 667777777776444432 122 22 3343 4566665554
Q ss_pred EEEEecceEEehhH---HHHHHhhccchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHhcCCchhHHHHHHhhhhhhhcc
Q 001837 275 TTAVAEDCVVAKMA---KLVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACP 351 (1007)
Q Consensus 275 V~~tG~~T~~gki~---~lv~~a~~~ks~lq~~~~~i~~~~~~i~l~ia~l~~l~~~~~~~~~~~~~~~~al~vLv~a~P 351 (1007)
-...+.-+..|.-. +.....+..+.. ...+.+....+...++.++++++.+.+++...... .+..++...+...-
T Consensus 253 G~~~~vV~atG~~T~~GkI~~~v~~~~~~-~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~~~-~~~~~l~~alsv~V 330 (902)
T PRK10517 253 GTAQAVVIATGANTWFGQLAGRVSEQDSE-PNAFQQGISRVSWLLIRFMLVMAPVVLLINGYTKG-DWWEAALFALSVAV 330 (902)
T ss_pred eeEEEEEEEeccccHHHHHHHHhhccCCC-CCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhcC-CHHHHHHHHHHHHH
Confidence 44444444444322 222222221211 22344555555544444444444333333211111 12223333333333
Q ss_pred ccchhhHHHHHHHHHHHHHHcCCcccchhhhhhccCccEEEecCccccccCceEEEEe
Q 001837 352 CALILSTPVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEF 409 (1007)
Q Consensus 352 ~aL~l~i~la~~~a~~~lak~gilvk~~~~lE~Lg~vd~I~fDKTGTLT~g~~~v~~i 409 (1007)
.+.|-++|+++..++.... ..|++=.+++-+-..--|-|.+.+.-+
T Consensus 331 ~~~Pe~LP~~vt~~la~g~------------~~mak~~ilVk~l~aiE~lg~v~vic~ 376 (902)
T PRK10517 331 GLTPEMLPMIVTSTLARGA------------VKLSKQKVIVKRLDAIQNFGAMDILCT 376 (902)
T ss_pred HHcccHHHHHHHHHHHHHH------------HHHHhCCcEEecchhhhhccCCCEEEe
Confidence 3455666777776665433 345555666665555445566555543
No 215
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=54.96 E-value=4.1e+02 Score=32.88 Aligned_cols=106 Identities=17% Similarity=0.168 Sum_probs=55.7
Q ss_pred ccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEEeccCHhHHHHHHHHHhhCCeEEEEcCCccCHHHHhhC
Q 001837 526 TGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEGKTAMIGDGINDAPALATA 605 (1007)
Q Consensus 526 ~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~ar~sPeqK~~iV~~Lq~~G~VamVGDG~NDa~ALk~A 605 (1007)
.+-.+.++++++.|-+ ++..||...-+ ..++..|.-..+|.|. ..+...|
T Consensus 453 ~~K~~~v~~l~~~~~~-v~~VGDg~nD~---------------------------~al~~A~vgia~g~g~--~~a~~~A 502 (562)
T TIGR01511 453 DDKAALIKELQEKGRV-VAMVGDGINDA---------------------------PALAQADVGIAIGAGT--DVAIEAA 502 (562)
T ss_pred HHHHHHHHHHHHcCCE-EEEEeCCCccH---------------------------HHHhhCCEEEEeCCcC--HHHHhhC
Confidence 3446778888877644 44456654432 2344444223346553 3566788
Q ss_pred CeeEEeCCCCcHHHHhhcCEEEecCCcchHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhh-hHHHHH
Q 001837 606 DIGISMGISGSALATETGQVILMSNDIRKVPEAI-RLARKAHWKVIENIAVSIATKAGII-ALALGG-HPLVWA 676 (1007)
Q Consensus 606 DVGIAmg~~gs~~A~~aADiVLl~~~l~~I~~lI-~~gR~~~~~i~~ni~~al~~ni~~i-~la~~g-~~~~~~ 676 (1007)
|+-+.= ..- ..+..+.++- +.-|.+++|+.-.+.|-+..=.+++ .+.-+| +.+||.
T Consensus 503 dvvl~~---~~l------------~~l~~~i~lsr~~~~~i~qn~~~a~~~n~~~i~la~~~~~~~g~~~~p~~ 561 (562)
T TIGR01511 503 DVVLMR---NDL------------NDVATAIDLSRKTLRRIKQNLLWAFGYNVIAIPIAAGVLYPIGILLSPAV 561 (562)
T ss_pred CEEEeC---CCH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccCCCc
Confidence 986631 111 2344444444 4466788888877777655433322 222234 455554
No 216
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=53.91 E-value=41 Score=34.93 Aligned_cols=85 Identities=16% Similarity=0.259 Sum_probs=57.9
Q ss_pred ccccHHHHHHHHHHCCCeEEEEc-CCCHHHHHHHHHHhCCC----------cceEEeccCHhHHHHHHHHHhhC-C----
Q 001837 524 CRTGAAEAVNQLKSLGIRTAMLT-GDNQSAAMQAQEQLGNA----------LNVVHSELLPEDKAKIINQFKQE-G---- 587 (1007)
Q Consensus 524 lR~~a~eaI~~Lr~aGIkv~mlT-GD~~~tA~~vA~~lGI~----------~~~V~ar~sPeqK~~iV~~Lq~~-G---- 587 (1007)
+-|++++.++.|++.|+++.+.| -|.+..|+++-+.+++. .---+-+.-|..|..=.+.+++. |
T Consensus 46 lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~~eI~~gsK~~Hf~~i~~~tgI~y~ 125 (169)
T PF12689_consen 46 LYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPLIEYFDYLEIYPGSKTTHFRRIHRKTGIPYE 125 (169)
T ss_dssp --TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C----------CCECEEEESSS-HHHHHHHHHHHH---GG
T ss_pred eCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccccchhhcchhheecCchHHHHHHHHHhcCCChh
Confidence 57999999999999999999999 58899999999999998 22234556678999999988876 5
Q ss_pred eEEEEcCCccCHHHHhhCCeeEE
Q 001837 588 KTAMIGDGINDAPALATADIGIS 610 (1007)
Q Consensus 588 ~VamVGDG~NDa~ALk~ADVGIA 610 (1007)
.+++.=|-.......+. +|+.
T Consensus 126 eMlFFDDe~~N~~~v~~--lGV~ 146 (169)
T PF12689_consen 126 EMLFFDDESRNIEVVSK--LGVT 146 (169)
T ss_dssp GEEEEES-HHHHHHHHT--TT-E
T ss_pred HEEEecCchhcceeeEe--cCcE
Confidence 47888776554444444 4443
No 217
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=53.41 E-value=12 Score=31.65 Aligned_cols=49 Identities=16% Similarity=0.268 Sum_probs=28.7
Q ss_pred hhhcccccccccccccccccCCCchHHHHHHHHHHHHHHHHhhhhHHHHHHHhhhhc
Q 001837 68 LNQARFEANVRAYGGTSYQKKWPSPYAMACGVLLAISILKYVYHPLRWFALGAVAIG 124 (1007)
Q Consensus 68 L~~aGy~as~~~~g~~~~~~~~~~~~~~~~gill~isl~~~~~~~l~~l~l~~~~~~ 124 (1007)
|.+...+.+...+|+|....+.+.+++.. ++..|.+|+.++++++.+++
T Consensus 11 Ls~~~v~~r~~~~G~N~l~~~~~~s~~~~--------~l~~~~~p~~~iL~~~a~is 59 (64)
T smart00831 11 LSSEEAARRLERYGPNELPPPKKRSPLLR--------FLRQFHNPLIYILLAAAVLS 59 (64)
T ss_pred CCHHHHHHHHHHhCCCCCCCCCCCCHHHH--------HHHHHHhHHHHHHHHHHHHH
Confidence 33333445566778887766554444432 45666778877766555444
No 218
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=52.75 E-value=43 Score=38.77 Aligned_cols=37 Identities=19% Similarity=0.215 Sum_probs=34.8
Q ss_pred cccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh-C
Q 001837 525 RTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQL-G 561 (1007)
Q Consensus 525 R~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~l-G 561 (1007)
-|++.+++++|+++|+++.++|+-....+..+.+.+ |
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g 223 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLG 223 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhC
Confidence 579999999999999999999999999999999996 6
No 219
>PRK13748 putative mercuric reductase; Provisional
Probab=51.95 E-value=44 Score=41.01 Aligned_cols=64 Identities=17% Similarity=0.334 Sum_probs=50.9
Q ss_pred EEEecCCCCchHHHHHHHHHhCCCCeeEEEEecCCCeEEEEEcCCcccHHHHHHHhhhccccccc
Q 001837 13 YFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARFEANV 77 (1007)
Q Consensus 13 ~l~V~Gm~C~~Ca~~IE~~L~~l~GV~~v~Vn~~t~tv~V~~D~~~~s~~~I~~aL~~aGy~as~ 77 (1007)
.+.+.+|.|++|...++..+...+++....+++..+...+.+++. .....+...++..++...+
T Consensus 3 ~i~i~g~~C~~c~~~ie~~l~~~~gv~~a~~~~~~~~~~v~~~~~-~~~~~i~~~i~~~g~~~~~ 66 (561)
T PRK13748 3 TLKITGMTCDSCAAHVKDALEKVPGVQSADVSYPKGSAQLAIEVG-TSPDALTAAVAGLGYRATL 66 (561)
T ss_pred EEEECCeecHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEEECCC-CCHHHHHHHHHHcCCeeec
Confidence 466899999999999999999999999999999999988887643 3455565556666665433
No 220
>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A ....
Probab=51.84 E-value=12 Score=32.49 Aligned_cols=56 Identities=21% Similarity=0.254 Sum_probs=36.3
Q ss_pred cHHHHHHHhh---hccc-----ccccccccccccccCCCchHHHHHHHHHHHHHHHHhhhhHHHHHHHhhhh
Q 001837 60 SQHQIVKALN---QARF-----EANVRAYGGTSYQKKWPSPYAMACGVLLAISILKYVYHPLRWFALGAVAI 123 (1007)
Q Consensus 60 s~~~I~~aL~---~aGy-----~as~~~~g~~~~~~~~~~~~~~~~gill~isl~~~~~~~l~~l~l~~~~~ 123 (1007)
+.+++.+.++ ..|. ..+...+|+|....+.+.+++. .++..|.+|+.++++++.++
T Consensus 5 ~~~~v~~~l~t~~~~GLs~~ev~~r~~~~G~N~l~~~~~~s~~~--------~~~~~f~~~~~~lL~~aail 68 (69)
T PF00690_consen 5 SVEEVLKRLNTSSSQGLSSEEVEERRKKYGPNELPEPKKKSLWR--------IFLKQFKNPFIILLLIAAIL 68 (69)
T ss_dssp SHHHHHHHHTTBTSSBBTHHHHHHHHHHHSSSSTTTTTSSSHHH--------HHHHHTTSHHHHHHHHHHHH
T ss_pred CHHHHHHHHCcCCCCCCCHHHHHHHHHhcccccccccccCcHHH--------HHHHHHHhHHHHHHHHHHHH
Confidence 4567777775 2343 3455678999987666666554 25677788888777665544
No 221
>PRK14018 trifunctional thioredoxin/methionine sulfoxide reductase A/B protein; Provisional
Probab=50.70 E-value=32 Score=41.96 Aligned_cols=50 Identities=20% Similarity=0.125 Sum_probs=43.2
Q ss_pred chHHHHHHHHHhCCCCeeEEEEecCCC------------------eEEEEEcCCcccHHHHHHHhhhc
Q 001837 22 SSEVPLIENILKSLEGVKEVSVIVPSR------------------TVIVLHDALLISQHQIVKALNQA 71 (1007)
Q Consensus 22 ~~Ca~~IE~~L~~l~GV~~v~Vn~~t~------------------tv~V~~D~~~~s~~~I~~aL~~a 71 (1007)
.+|-|-+|..+.+++||.++++=+..+ .|.|.|||..++.++|++..-..
T Consensus 205 gGCFWg~e~~f~~~~GV~~t~~GYagG~~~~PtY~~Vc~gtgH~E~V~V~yDp~~is~~~Ll~~f~~~ 272 (521)
T PRK14018 205 GGCFWGLEAYFQRIDGVVDAVSGYANGNTKNPSYEDVYRHSGHAETVKVTYDADKLSLDTILQYYFRV 272 (521)
T ss_pred cCCchhhHHHHccCCCEEEEEEeeCCCCCCCCChhhccCCCCcEEEEEEEECCCcCcHHHHHHHHHHh
Confidence 789999999999999999999866655 47899999999999988877653
No 222
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=47.89 E-value=5.5e+02 Score=33.67 Aligned_cols=180 Identities=13% Similarity=0.102 Sum_probs=90.3
Q ss_pred CcEEEEeCCCcccccEEEEe-ce-eeeecccCCCCCeeeEec--CCC--ee--eece-------------EEeeeeEEEE
Q 001837 216 NTVLAVKAGEVIPIDGIVVD-GK-CEVDEKTLTGESYPVSKQ--KGS--TV--WAGT-------------INLNGYISVE 274 (1007)
Q Consensus 216 GDIV~L~~Ge~VPaDgiVl~-G~-~~VDES~LTGES~Pv~K~--~g~--~V--~aGT-------------~v~~G~~~~~ 274 (1007)
|....|...|.+|-|.++++ |+ .-+|=-.+.|++.-+.=. .|. .| ..|. .+..|+....
T Consensus 139 g~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~ 218 (867)
T TIGR01524 139 GSMDEVPIDALVPGDLIELAAGDIIPADARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLS 218 (867)
T ss_pred CeEEEEEhhcCCCCCEEEECCCCEEcccEEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEE
Confidence 77889999999999998886 54 566666666665433321 121 12 3333 3566765555
Q ss_pred EEEEecceEEehhHHHHH--HhhccchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHhcCCchhHHHHHHhhhhhhhccc
Q 001837 275 TTAVAEDCVVAKMAKLVE--EAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPC 352 (1007)
Q Consensus 275 V~~tG~~T~~gki~~lv~--~a~~~ks~lq~~~~~i~~~~~~i~l~ia~l~~l~~~~~~~~~~~~~~~~al~vLv~a~P~ 352 (1007)
-...+.-+..|.-...-. +.-.. ..-...+++....+...+..++++++++.+++.... ...+..++...+...-.
T Consensus 219 G~~~~~V~~tG~~T~~gki~~~v~~-~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~al~l~v~ 296 (867)
T TIGR01524 219 GHAQAVVLATGSSTWFGSLAIAATE-RRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLM-KGDWLEAFLFALAVAVG 296 (867)
T ss_pred eEEEEEEEEEcCccHHHHHHHHhhC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHHh-cCCHHHHHHHHHHHHHH
Confidence 444555555554322211 11222 111223444455555444444444333322222111 11122233333333333
Q ss_pred cchhhHHHHHHHHHHHHHHcCCcccchhhhhhccCccEEEecCccccccCceEEEEe
Q 001837 353 ALILSTPVVTYCALTKAATSGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMSEF 409 (1007)
Q Consensus 353 aL~l~i~la~~~a~~~lak~gilvk~~~~lE~Lg~vd~I~fDKTGTLT~g~~~v~~i 409 (1007)
+.|-++|+++..++... ..+|++-.+++-+-..-=|-|.+.+.-+
T Consensus 297 ~iP~~Lp~~vt~~la~g------------~~~mak~~ilvk~l~aiE~lg~v~vic~ 341 (867)
T TIGR01524 297 LTPEMLPMIVSSNLAKG------------AINMSKKKVIVKELSAIQNFGAMDILCT 341 (867)
T ss_pred hCcchHHHHHHHHHHHH------------HHHHHhCCcEEccchhhhhccCccEEEe
Confidence 45556677776666533 3455666666666666556666665544
No 223
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=47.40 E-value=1.2e+02 Score=34.17 Aligned_cols=62 Identities=15% Similarity=0.328 Sum_probs=34.7
Q ss_pred EeccCHhHHHHHHHHHhh--CC-eEEEEcC-CccCHH---HHhhCCeeEEeCCCCc-H--HHHhhcCEEEec
Q 001837 568 HSELLPEDKAKIINQFKQ--EG-KTAMIGD-GINDAP---ALATADIGISMGISGS-A--LATETGQVILMS 629 (1007)
Q Consensus 568 ~ar~sPeqK~~iV~~Lq~--~G-~VamVGD-G~NDa~---ALk~ADVGIAmg~~gs-~--~A~~aADiVLl~ 629 (1007)
|.-+||..=.++++...- .| .|+++|- |+-=.| .|.+++.-+.+-.+.+ + .....||+|+.-
T Consensus 137 ~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVI~a 208 (284)
T PRK14179 137 MIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLAEVARKADILVVA 208 (284)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEe
Confidence 455667665555555442 26 7999999 655544 4444544443321222 2 234678888754
No 224
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=47.30 E-value=42 Score=34.26 Aligned_cols=42 Identities=12% Similarity=0.031 Sum_probs=38.1
Q ss_pred cCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCC
Q 001837 521 SDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNA 563 (1007)
Q Consensus 521 ~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~ 563 (1007)
.=.+||++.+.+++|++. +++++.|.-....|..+.+.++..
T Consensus 56 ~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~ 97 (156)
T TIGR02250 56 LTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPD 97 (156)
T ss_pred EEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcC
Confidence 345799999999999955 999999999999999999999877
No 225
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=46.80 E-value=4.5e+02 Score=34.67 Aligned_cols=222 Identities=12% Similarity=0.145 Sum_probs=105.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcceEEecCCEEeeCCCcccCcEEEEeCCCcccccEEEEe-ce-eeeec
Q 001837 165 IIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKAIIAGTGEEVDAGEVKLNTVLAVKAGEVIPIDGIVVD-GK-CEVDE 242 (1007)
Q Consensus 165 ~Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~~~~V~rdg~~V~~~dLv~GDIV~L~~Ge~VPaDgiVl~-G~-~~VDE 242 (1007)
--++++.+-............+.-+.+.++... ......| ++-|....+...|.+|-|.++++ |+ .-.|=
T Consensus 38 ~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~----~~~~~~V----iRdg~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~ 109 (917)
T TIGR01116 38 EPFVILLILVANAIVGVWQERNAEKAIEALKEY----ESEHAKV----LRDGRWSVIKAKDLVPGDIVELAVGDKVPADI 109 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----CCCceEE----EECCEEEEEEHHHCCCCCEEEECCCCEeeccE
Confidence 344555555666666666666665555554321 1111122 34488899999999999998886 44 55566
Q ss_pred ccCCCCCeeeEec--CCC--ee--eec-------------eEEeeeeEEEEEEEEecceEEehhHH---HHHHhhccchH
Q 001837 243 KTLTGESYPVSKQ--KGS--TV--WAG-------------TINLNGYISVETTAVAEDCVVAKMAK---LVEEAQNSKSR 300 (1007)
Q Consensus 243 S~LTGES~Pv~K~--~g~--~V--~aG-------------T~v~~G~~~~~V~~tG~~T~~gki~~---lv~~a~~~ks~ 300 (1007)
-.+.|++.-+.-. .|. .+ ..| ..+..|+....-...+.-+..|.-.+ .....+..+.+
T Consensus 110 ~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~~G~~~~~V~~tG~~T~~gki~~~~~~~~~~ 189 (917)
T TIGR01116 110 RVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRTGMSTEIGKIRDEMRAAEQE 189 (917)
T ss_pred EEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEecceEEEEEEEeCCCCHHHHHHHHhhccCCC
Confidence 6666654333221 121 12 122 34566666555444555555554332 22222222222
Q ss_pred HHHHHHHHHHhHhHHHHHHHHHHHHHHHHhcCCchh------HHHHH---HhhhhhhhccccchhhHHHHHHHHHHHHHH
Q 001837 301 IQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHK------QWFHL---ALVVLVSACPCALILSTPVVTYCALTKAAT 371 (1007)
Q Consensus 301 lq~~~~~i~~~~~~i~l~ia~l~~l~~~~~~~~~~~------~~~~~---al~vLv~a~P~aL~l~i~la~~~a~~~lak 371 (1007)
...+++....+...++.+.++++++.+++....+. .|+.. ++.+.+...-.+.|.++|+++..++....
T Consensus 190 -~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~- 267 (917)
T TIGR01116 190 -DTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYYFKIAVALAVAAIPEGLPAVITTCLALGT- 267 (917)
T ss_pred -CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHhhhhhccccccHHHHHHHHHHHH-
Confidence 22344444444444444333333333333211110 01111 11122233344566677777766665443
Q ss_pred cCCcccchhhhhhccCccEEEecCccccccCceEEE
Q 001837 372 SGLLIKGGDYLQTLAKVRFMAFDKTGTITRGEFVMS 407 (1007)
Q Consensus 372 ~gilvk~~~~lE~Lg~vd~I~fDKTGTLT~g~~~v~ 407 (1007)
..|.+-.+++-+-...=|-|...+.
T Consensus 268 -----------~~m~~~~ilvk~~~~iE~lg~v~~i 292 (917)
T TIGR01116 268 -----------RKMAKKNAIVRKLPSVETLGCTTVI 292 (917)
T ss_pred -----------HHHHHCCcEecCcHHHHhccCceEE
Confidence 3344445555444444444555444
No 226
>PF00875 DNA_photolyase: DNA photolyase from Prosite.; InterPro: IPR006050 DNA photolyases are enzymes that bind to DNA containing pyrimidine dimers: on absorption of visible light, they catalyse dimer splitting into the constituent monomers, a process called photoreactivation []. This is a DNA repair mechanism, repairing mismatched pyrimidine dimers induced by exposure to ultra-violet light []. The precise mechanisms involved in substrate binding, conversion of light energy to the mechanical energy needed to rupture the cyclobutane ring, and subsequent release of the product are uncertain []. Analysis of DNA lyases has revealed the presence of an intrinsic chromophore, all monomers containing a reduced FAD moiety, and, in addition, either a reduced pterin or 8-hydroxy-5-diazaflavin as a second chromophore [, ]. Either chromophore may act as the primary photon acceptor, peak absorptions occurring in the blue region of the spectrum and in the UV-B region, at a wavelength around 290nm []. This domain binds a light harvesting cofactor.; GO: 0003913 DNA photolyase activity, 0006281 DNA repair; PDB: 3UMV_A 2J07_A 1IQU_A 2J09_A 2J08_A 1IQR_A 1DNP_A 3FY4_B 2VTB_A 2J4D_B ....
Probab=46.42 E-value=92 Score=31.62 Aligned_cols=74 Identities=19% Similarity=0.321 Sum_probs=49.4
Q ss_pred HHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEEecc--CHhHH---HHHHHHHhhCC-e-EEEEcCCccCHH
Q 001837 528 AAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSEL--LPEDK---AKIINQFKQEG-K-TAMIGDGINDAP 600 (1007)
Q Consensus 528 a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~ar~--sPeqK---~~iV~~Lq~~G-~-VamVGDG~NDa~ 600 (1007)
+.+.=++|++.|+..+++.||....-..++++.|+. .||+.- .|+.+ .++.+.|++.| . ..+-++.+-+..
T Consensus 55 L~~L~~~L~~~g~~L~v~~g~~~~~l~~l~~~~~~~--~V~~~~~~~~~~~~rd~~v~~~l~~~~i~~~~~~~~~L~~~~ 132 (165)
T PF00875_consen 55 LADLQESLRKLGIPLLVLRGDPEEVLPELAKEYGAT--AVYFNEEYTPYERRRDERVRKALKKHGIKVHTFDDHTLVPPD 132 (165)
T ss_dssp HHHHHHHHHHTTS-EEEEESSHHHHHHHHHHHHTES--EEEEE---SHHHHHHHHHHHHHHHHTTSEEEEE--SSSS-HH
T ss_pred HHHHHHHHHhcCcceEEEecchHHHHHHHHHhcCcC--eeEeccccCHHHHHHHHHHHHHHHhcceEEEEECCcEEEecc
Confidence 444556677889999999999999999999999998 888754 44443 34455677767 3 345566666655
Q ss_pred HHh
Q 001837 601 ALA 603 (1007)
Q Consensus 601 ALk 603 (1007)
.+.
T Consensus 133 ~i~ 135 (165)
T PF00875_consen 133 DIP 135 (165)
T ss_dssp HCH
T ss_pred ccc
Confidence 543
No 227
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=45.11 E-value=2.4e+02 Score=37.09 Aligned_cols=35 Identities=14% Similarity=0.237 Sum_probs=20.8
Q ss_pred CcEEEEeCCCcccccEEEEe-ce-eeeecccCCCCCe
Q 001837 216 NTVLAVKAGEVIPIDGIVVD-GK-CEVDEKTLTGESY 250 (1007)
Q Consensus 216 GDIV~L~~Ge~VPaDgiVl~-G~-~~VDES~LTGES~ 250 (1007)
|....|...|.+|-|.++++ |+ .-+|=-.+.|++.
T Consensus 162 g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~g~~l 198 (903)
T PRK15122 162 PVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRDL 198 (903)
T ss_pred CeEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcCce
Confidence 35666777777777776664 43 4555555555543
No 228
>PLN02423 phosphomannomutase
Probab=44.95 E-value=30 Score=37.87 Aligned_cols=39 Identities=23% Similarity=0.324 Sum_probs=32.7
Q ss_pred hHHHHHHHHHhhCCeEEEEcC----CccCHHHHhh-CCeeEEeC
Q 001837 574 EDKAKIINQFKQEGKTAMIGD----GINDAPALAT-ADIGISMG 612 (1007)
Q Consensus 574 eqK~~iV~~Lq~~G~VamVGD----G~NDa~ALk~-ADVGIAmg 612 (1007)
-.|..-++.|+....|++.|| |.||.+||+. -=.||.+.
T Consensus 188 vnKg~al~~L~~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~ 231 (245)
T PLN02423 188 WDKTYCLQFLEDFDEIHFFGDKTYEGGNDHEIFESERTIGHTVT 231 (245)
T ss_pred CCHHHHHHHhcCcCeEEEEeccCCCCCCcHHHHhCCCcceEEeC
Confidence 369999999993348999999 8999999997 55688883
No 229
>PRK05585 yajC preprotein translocase subunit YajC; Validated
Probab=44.53 E-value=1e+02 Score=29.49 Aligned_cols=27 Identities=19% Similarity=0.374 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHHhhc-cCCcceEEecCC
Q 001837 179 RASHKATAVMSSLMS-IAPQKAIIAGTG 205 (1007)
Q Consensus 179 ~~~~k~~~~l~~L~~-~~p~~~~V~rdg 205 (1007)
+..+|.++..+++.+ +.+..-++...|
T Consensus 37 RpqkK~~k~~~~~~~~Lk~Gd~VvT~gG 64 (106)
T PRK05585 37 RPQQKRQKEHKKMLSSLAKGDEVVTNGG 64 (106)
T ss_pred cHHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 333343444444443 444444444555
No 230
>PRK03692 putative UDP-N-acetyl-D-mannosaminuronic acid transferase; Provisional
Probab=44.28 E-value=1.3e+02 Score=33.09 Aligned_cols=115 Identities=10% Similarity=0.183 Sum_probs=68.2
Q ss_pred HHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh----CCCcceEE---eccCHhHHHHHHHHHhhCC-eEEEEcCCccC--
Q 001837 529 AEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQL----GNALNVVH---SELLPEDKAKIINQFKQEG-KTAMIGDGIND-- 598 (1007)
Q Consensus 529 ~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~l----GI~~~~V~---ar~sPeqK~~iV~~Lq~~G-~VamVGDG~ND-- 598 (1007)
.+.++...+.|.++.++ |..+.++..+++.+ |+. .+. .=..|++...+++.+.+.+ .+++||=|.-=
T Consensus 95 ~~ll~~~~~~~~~v~ll-G~~~~v~~~a~~~l~~~y~l~--i~g~~~Gyf~~~e~~~i~~~I~~s~~dil~VglG~PkQE 171 (243)
T PRK03692 95 EALMARAGKEGTPVFLV-GGKPEVLAQTEAKLRTQWNVN--IVGSQDGYFTPEQRQALFERIHASGAKIVTVAMGSPKQE 171 (243)
T ss_pred HHHHHHHHhcCCeEEEE-CCCHHHHHHHHHHHHHHhCCE--EEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEECCCcHHH
Confidence 45566667789999999 55556555555443 544 221 1235888888999999998 89999999432
Q ss_pred -----HHHHhhCCeeEEeCCCCcHH---HHhhcCEEEecCCcchHHHHHHHHHHHHH
Q 001837 599 -----APALATADIGISMGISGSAL---ATETGQVILMSNDIRKVPEAIRLARKAHW 647 (1007)
Q Consensus 599 -----a~ALk~ADVGIAmg~~gs~~---A~~aADiVLl~~~l~~I~~lI~~gR~~~~ 647 (1007)
....-...|.+++| ..-+. ...-|.-.+-.-+|..+.+++.+=|+..+
T Consensus 172 ~~~~~~~~~~~~~v~~gvG-g~fD~~aG~~~RAP~w~~~~gLEWlyRl~~EP~R~~R 227 (243)
T PRK03692 172 IFMRDCRLVYPDALYMGVG-GTYDVFTGHVKRAPKIWQNLGLEWLYRLLSQPSRIRR 227 (243)
T ss_pred HHHHHHHHhCCCCEEEEeC-eEEEEecCCcCcCcHHHHHhChHHHHHhHhCcHHHHH
Confidence 22222345566665 11110 11223333334467888888888776433
No 231
>KOG1635 consensus Peptide methionine sulfoxide reductase [Posttranslational modification, protein turnover, chaperones]
Probab=43.98 E-value=43 Score=34.65 Aligned_cols=50 Identities=20% Similarity=0.118 Sum_probs=42.9
Q ss_pred chHHHHHHHHHhCCCCeeEEEEecCC-------------------CeEEEEEcCCcccHHHHHHHhhhc
Q 001837 22 SSEVPLIENILKSLEGVKEVSVIVPS-------------------RTVIVLHDALLISQHQIVKALNQA 71 (1007)
Q Consensus 22 ~~Ca~~IE~~L~~l~GV~~v~Vn~~t-------------------~tv~V~~D~~~~s~~~I~~aL~~a 71 (1007)
..|-|.+|.+...++||-..+|-+.. +.+.|.|||..++.++|.+.....
T Consensus 31 ~GCFWg~E~a~~~l~gV~~T~vGYagG~~~nPtYk~vc~~tT~HaEvvrV~ydpk~~sy~~Lld~Fw~~ 99 (191)
T KOG1635|consen 31 AGCFWGVELAYQRLPGVVRTEVGYAGGITDNPTYKDVCSGTTNHAEVVRVQYDPKVISYEELLDFFWSR 99 (191)
T ss_pred ccchhhHHHHHhhcCCeEEEeecccCCccCCcchhhhccCCCCcceEEEEEeCcccccHHHHHHHHHHc
Confidence 57999999999999999999987654 357899999999999998888764
No 232
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=43.47 E-value=1.4e+02 Score=33.58 Aligned_cols=43 Identities=23% Similarity=0.367 Sum_probs=30.7
Q ss_pred cCcccccHHHHHHHHHHCCCeE---EEEcCCCHHHHH------HHHHHhCCC
Q 001837 521 SDACRTGAAEAVNQLKSLGIRT---AMLTGDNQSAAM------QAQEQLGNA 563 (1007)
Q Consensus 521 ~D~lR~~a~eaI~~Lr~aGIkv---~mlTGD~~~tA~------~vA~~lGI~ 563 (1007)
...++.+.++.|+.|++.|+++ +++.||++.... ..|+++||.
T Consensus 11 A~~i~~~ik~~i~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~ 62 (284)
T PRK14170 11 AKEIQEKVTREVAELVKEGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMK 62 (284)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCE
Confidence 4567788888888888878763 566788877665 346677765
No 233
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=43.30 E-value=75 Score=34.45 Aligned_cols=84 Identities=27% Similarity=0.394 Sum_probs=51.1
Q ss_pred EEEEecCcccccHHHHHHHHHHCCCeEEEEc---CCCHHHHHH-HHHHhCCCcceEEeccCHhHH----HHHHHHHhh--
Q 001837 516 GIFCLSDACRTGAAEAVNQLKSLGIRTAMLT---GDNQSAAMQ-AQEQLGNALNVVHSELLPEDK----AKIINQFKQ-- 585 (1007)
Q Consensus 516 Gli~l~D~lR~~a~eaI~~Lr~aGIkv~mlT---GD~~~tA~~-vA~~lGI~~~~V~ar~sPeqK----~~iV~~Lq~-- 585 (1007)
|++.-.+.+=|++.++|+.+++.|++++++| |........ +.+..|+. ++|++= ....+.|++
T Consensus 7 GvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~-------~~~~~iits~~~~~~~l~~~~ 79 (236)
T TIGR01460 7 GVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVD-------VSPDQIITSGSVTKDLLRQRF 79 (236)
T ss_pred CccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCC-------CCHHHeeeHHHHHHHHHHHhC
Confidence 4444456677899999999999999999999 444443333 33335654 233321 122334443
Q ss_pred CC-eEEEEcCCccCHHHHhhCCe
Q 001837 586 EG-KTAMIGDGINDAPALATADI 607 (1007)
Q Consensus 586 ~G-~VamVGDG~NDa~ALk~ADV 607 (1007)
.+ .|.++|.. .....|+.+++
T Consensus 80 ~~~~v~v~G~~-~~~~~l~~~g~ 101 (236)
T TIGR01460 80 EGEKVYVIGVG-ELRESLEGLGF 101 (236)
T ss_pred CCCEEEEECCH-HHHHHHHHcCC
Confidence 23 78999864 34556665543
No 234
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=43.27 E-value=96 Score=30.99 Aligned_cols=70 Identities=13% Similarity=0.134 Sum_probs=47.2
Q ss_pred CCEEEEEEEecCcccccHHHHHHHHHHCCCe--EEEEcCCC------HHHHHHHHHHhCCCcceEEeccCHhHHHHHHHH
Q 001837 511 GASPVGIFCLSDACRTGAAEAVNQLKSLGIR--TAMLTGDN------QSAAMQAQEQLGNALNVVHSELLPEDKAKIINQ 582 (1007)
Q Consensus 511 d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIk--v~mlTGD~------~~tA~~vA~~lGI~~~~V~ar~sPeqK~~iV~~ 582 (1007)
+-.++|+=++.-.--+..++++++|+++|++ ++|+-|-- ......-++++|++ .+|..-+|- .+++..
T Consensus 52 ~adiVglS~l~~~~~~~~~~~~~~l~~~gl~~~~vivGG~~vi~~~d~~~~~~~l~~~Gv~--~vF~pgt~~--~~iv~~ 127 (134)
T TIGR01501 52 KADAILVSSLYGHGEIDCKGLRQKCDEAGLEGILLYVGGNLVVGKQDFPDVEKRFKEMGFD--RVFAPGTPP--EVVIAD 127 (134)
T ss_pred CCCEEEEecccccCHHHHHHHHHHHHHCCCCCCEEEecCCcCcChhhhHHHHHHHHHcCCC--EEECcCCCH--HHHHHH
Confidence 4457777777777777899999999999983 56676631 11224557899988 999866543 334444
Q ss_pred Hh
Q 001837 583 FK 584 (1007)
Q Consensus 583 Lq 584 (1007)
++
T Consensus 128 l~ 129 (134)
T TIGR01501 128 LK 129 (134)
T ss_pred HH
Confidence 43
No 235
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=43.12 E-value=58 Score=32.16 Aligned_cols=33 Identities=18% Similarity=0.162 Sum_probs=28.8
Q ss_pred CcccccHHHHHHHHHHCCCeEEEEcCCCHHHHH
Q 001837 522 DACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAM 554 (1007)
Q Consensus 522 D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~ 554 (1007)
+++.+++.++++++++.|+.++++||-......
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTYE 55 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhhh
Confidence 568889999999999999999999999876543
No 236
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=41.65 E-value=1.7e+02 Score=32.92 Aligned_cols=43 Identities=16% Similarity=0.317 Sum_probs=29.4
Q ss_pred cCcccccHHHHHHHHHHCCCeE---EEEcCCCHHHHH------HHHHHhCCC
Q 001837 521 SDACRTGAAEAVNQLKSLGIRT---AMLTGDNQSAAM------QAQEQLGNA 563 (1007)
Q Consensus 521 ~D~lR~~a~eaI~~Lr~aGIkv---~mlTGD~~~tA~------~vA~~lGI~ 563 (1007)
..+++.+.++.++.|++.|+++ +++-||++.... ..|+++||.
T Consensus 10 a~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~ 61 (282)
T PRK14169 10 SKKILADLKQTVAKLAQQDVTPTLAVVLVGSDPASEVYVRNKQRRAEDIGVR 61 (282)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCE
Confidence 3456777888888888777763 556787776654 346677764
No 237
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=40.90 E-value=80 Score=30.58 Aligned_cols=68 Identities=19% Similarity=0.190 Sum_probs=47.4
Q ss_pred CCEEEEEEEecCcccccHHHHHHHHHHCCC-eE-EEEcCCCHHHHHHHHHHhCCCcceEE-eccCHhHHHHHH
Q 001837 511 GASPVGIFCLSDACRTGAAEAVNQLKSLGI-RT-AMLTGDNQSAAMQAQEQLGNALNVVH-SELLPEDKAKII 580 (1007)
Q Consensus 511 d~~~lGli~l~D~lR~~a~eaI~~Lr~aGI-kv-~mlTGD~~~tA~~vA~~lGI~~~~V~-ar~sPeqK~~iV 580 (1007)
+-.++++-.......+.+++.+++|+++|. ++ +++-|..+..-..-.+++|++ .+| .+.++++=+..+
T Consensus 50 ~~d~V~iS~~~~~~~~~~~~~~~~L~~~~~~~i~i~~GG~~~~~~~~~~~~~G~d--~~~~~~~~~~~~~~~~ 120 (122)
T cd02071 50 DVDVIGLSSLSGGHMTLFPEVIELLRELGAGDILVVGGGIIPPEDYELLKEMGVA--EIFGPGTSIEEIIDKI 120 (122)
T ss_pred CCCEEEEcccchhhHHHHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHCCCC--EEECCCCCHHHHHHHH
Confidence 345677777777888899999999999977 43 566665554445666789987 655 466666554443
No 238
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=40.56 E-value=1.3e+02 Score=31.18 Aligned_cols=107 Identities=18% Similarity=0.158 Sum_probs=70.5
Q ss_pred cHHHHHHHHHHCCCeEEEEcCCCHHH-HHHHHHHhCCCcceEEeccCHhHHHHHHHHHhhCCeEEEEcCCccCHHHHhhC
Q 001837 527 GAAEAVNQLKSLGIRTAMLTGDNQSA-AMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEGKTAMIGDGINDAPALATA 605 (1007)
Q Consensus 527 ~a~eaI~~Lr~aGIkv~mlTGD~~~t-A~~vA~~lGI~~~~V~ar~sPeqK~~iV~~Lq~~G~VamVGDG~NDa~ALk~A 605 (1007)
|.-+++.++++.+-++.+++=.+... ...+.+.+|+.. ..+.=-+|++=...|+.++..|.-+.||++.- ....++.
T Consensus 65 Dil~al~~a~~~~~~Iavv~~~~~~~~~~~~~~ll~~~i-~~~~~~~~~e~~~~i~~~~~~G~~viVGg~~~-~~~A~~~ 142 (176)
T PF06506_consen 65 DILRALAKAKKYGPKIAVVGYPNIIPGLESIEELLGVDI-KIYPYDSEEEIEAAIKQAKAEGVDVIVGGGVV-CRLARKL 142 (176)
T ss_dssp HHHHHHHHCCCCTSEEEEEEESS-SCCHHHHHHHHT-EE-EEEEESSHHHHHHHHHHHHHTT--EEEESHHH-HHHHHHT
T ss_pred HHHHHHHHHHhcCCcEEEEecccccHHHHHHHHHhCCce-EEEEECCHHHHHHHHHHHHHcCCcEEECCHHH-HHHHHHc
Confidence 55666666666677787777555554 778888888852 23333568899999999999998888998753 2222222
Q ss_pred CeeEEeCCCCcHHHHhhcCEEEecCCcchHHHHHHHHHHHHHHHHH
Q 001837 606 DIGISMGISGSALATETGQVILMSNDIRKVPEAIRLARKAHWKVIE 651 (1007)
Q Consensus 606 DVGIAmg~~gs~~A~~aADiVLl~~~l~~I~~lI~~gR~~~~~i~~ 651 (1007)
+ -..+++..+..+|..++.+++++.+..++
T Consensus 143 g----------------l~~v~i~sg~esi~~Al~eA~~i~~~~~~ 172 (176)
T PF06506_consen 143 G----------------LPGVLIESGEESIRRALEEALRIARARRR 172 (176)
T ss_dssp T----------------SEEEESS--HHHHHHHHHHHHHHHHHHHH
T ss_pred C----------------CcEEEEEecHHHHHHHHHHHHHHHHHHHH
Confidence 2 23456667788999999999998877654
No 239
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=40.37 E-value=2.5e+02 Score=35.68 Aligned_cols=223 Identities=11% Similarity=0.115 Sum_probs=109.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccCCcceEEecCCEEeeCCCc-ccCcEEEEeCCCcccccEEEEe-ce
Q 001837 161 IEAGIIVFLFTIAEWLESRASHKATAVMSSLM-SIAPQKAIIAGTGEEVDAGEV-KLNTVLAVKAGEVIPIDGIVVD-GK 237 (1007)
Q Consensus 161 ~~a~~Il~l~~i~~~le~~~~~k~~~~l~~L~-~~~p~~~~V~rdg~~V~~~dL-v~GDIV~L~~Ge~VPaDgiVl~-G~ 237 (1007)
+++..|+++++++.++..+++..++..-++-. .+....... .+.-+ +-|....+...+.+|=|.++++ |+
T Consensus 63 ~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~-------~a~~v~rdg~~~~I~a~eLv~GDiV~v~~Gd 135 (673)
T PRK14010 63 LYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEM-------KARRIKQDGSYEMIDASDLKKGHIVRVATGE 135 (673)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcc-------eEEEEEeCCEEEEEEHHHcCCCCEEEECCCC
Confidence 34667788888999999998888775554433 332111110 11111 2477889999999999998886 54
Q ss_pred -eeeecccCCCCCeeeEec--CCC--ee--eec---eEEeeeeEEEEEEEEecceEEe---hhHHHHHHhhccchHHHHH
Q 001837 238 -CEVDEKTLTGESYPVSKQ--KGS--TV--WAG---TINLNGYISVETTAVAEDCVVA---KMAKLVEEAQNSKSRIQRF 304 (1007)
Q Consensus 238 -~~VDES~LTGES~Pv~K~--~g~--~V--~aG---T~v~~G~~~~~V~~tG~~T~~g---ki~~lv~~a~~~ks~lq~~ 304 (1007)
.-+|--.+.|++ -+.-. .|. .| -.| ..|..|+....=.-++.-|..| .+.++...-+..+. ++.
T Consensus 136 ~IPaDG~vieG~~-~VDESaLTGES~PV~K~~g~d~~~V~aGT~v~~G~~~i~Vta~g~~T~lgki~~lve~a~~--~kt 212 (673)
T PRK14010 136 QIPNDGKVIKGLA-TVDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEVEITSEPGHSFLDKMIGLVEGATR--KKT 212 (673)
T ss_pred cccCCeEEEEcce-EEecchhcCCCCceeccCCCccCeeecCceeecceEEEEEEEecccCHHHHHHHHHhhccc--cCC
Confidence 455555555543 22211 121 12 334 5566666554333333333333 22233322222111 122
Q ss_pred HHHHHHhHhHHHHHHHHHHHHHHHHhcCCchhHHHHHHhhhhhhhccccchhhHHHHHHHHHHHHHHcCCcccchhhhhh
Q 001837 305 VDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCALTKAATSGLLIKGGDYLQT 384 (1007)
Q Consensus 305 ~~~i~~~~~~i~l~ia~l~~l~~~~~~~~~~~~~~~~al~vLv~a~P~aL~l~i~la~~~a~~~lak~gilvk~~~~lE~ 384 (1007)
-..+..+..+..+.+.++++++ +++.... ...+...+.++++.+++..|-+++........ ....+
T Consensus 213 p~e~~l~~l~~~l~ii~l~~~~-~~~~~~~-~~~~~~~~~~~val~V~~IP~aL~~~~~~~~~------------~g~~r 278 (673)
T PRK14010 213 PNEIALFTLLMTLTIIFLVVIL-TMYPLAK-FLNFNLSIAMLIALAVCLIPTTIGGLLSAIGI------------AGMDR 278 (673)
T ss_pred HHHHHHHHHHHHHhHHHHHHHH-HHHHHHh-hccHHHHHHHHHHHHHHhhhhhHHHHHHHHHH------------HHHHH
Confidence 2223333333333333222222 2211000 11123356777777788777666665554432 23456
Q ss_pred ccCccEEEecCccccccCceEEE
Q 001837 385 LAKVRFMAFDKTGTITRGEFVMS 407 (1007)
Q Consensus 385 Lg~vd~I~fDKTGTLT~g~~~v~ 407 (1007)
+++-.+++-+-.--=|-|...+.
T Consensus 279 ~ak~gvLvk~~~avE~lg~v~vI 301 (673)
T PRK14010 279 VTQFNILAKSGRSVETCGDVNVL 301 (673)
T ss_pred HhhCCEEEeCcHHHHHhhCCCEE
Confidence 67777777543333333444443
No 240
>PF11491 DUF3213: Protein of unknown function (DUF3213) ; InterPro: IPR021583 The backbone structure of this family of proteins has been determined however the function remains unknown. The protein has an alpha and beta structure with a ferredoxin-like fold []. ; PDB: 2F40_A.
Probab=39.96 E-value=43 Score=30.40 Aligned_cols=56 Identities=20% Similarity=0.164 Sum_probs=34.2
Q ss_pred chHHHHHHHHHhCCCCeeEEEEecCCCeEEEEEcCCcccHHHHHHHhhhccccccc
Q 001837 22 SSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARFEANV 77 (1007)
Q Consensus 22 ~~Ca~~IE~~L~~l~GV~~v~Vn~~t~tv~V~~D~~~~s~~~I~~aL~~aGy~as~ 77 (1007)
+--|..++-.|...++|-.+-+|..++...|.||+...+.+++.+.+++.+++...
T Consensus 10 ~eeA~~~QYeLsk~~~vyRvFiNgYar~g~VifDe~kl~~e~lL~~le~~kpEVi~ 65 (88)
T PF11491_consen 10 PEEAMVKQYELSKNEAVYRVFINGYARNGFVIFDESKLSKEELLEMLEEFKPEVIE 65 (88)
T ss_dssp TTTTHHHHHTTTTTTTB------TTSS--EEE--B-S-SHHHH---HHHTTT-SS-
T ss_pred HHHHHHHHHHhhcccceeeeeecccccceEEEECcccCCHHHHHHHHHhcChhhee
Confidence 56677888999999999999999999999999999999999999999987776543
No 241
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=39.87 E-value=1.4e+02 Score=29.79 Aligned_cols=69 Identities=12% Similarity=0.098 Sum_probs=48.3
Q ss_pred CCEEEEEEEecCcccccHHHHHHHHHHCCC-e-EEEEcCCC------HHHHHHHHHHhCCCcceEEeccC-HhHHHHHHH
Q 001837 511 GASPVGIFCLSDACRTGAAEAVNQLKSLGI-R-TAMLTGDN------QSAAMQAQEQLGNALNVVHSELL-PEDKAKIIN 581 (1007)
Q Consensus 511 d~~~lGli~l~D~lR~~a~eaI~~Lr~aGI-k-v~mlTGD~------~~tA~~vA~~lGI~~~~V~ar~s-PeqK~~iV~ 581 (1007)
+-.++|+-.+.-...+.+++.+++|++.|. . .+++-|-- ..-....++++|++ .||..-+ +++=+..++
T Consensus 54 ~~d~V~lS~~~~~~~~~~~~~~~~L~~~~~~~~~i~vGG~~~~~~~~~~~~~~~l~~~G~~--~vf~~~~~~~~i~~~l~ 131 (137)
T PRK02261 54 DADAILVSSLYGHGEIDCRGLREKCIEAGLGDILLYVGGNLVVGKHDFEEVEKKFKEMGFD--RVFPPGTDPEEAIDDLK 131 (137)
T ss_pred CCCEEEEcCccccCHHHHHHHHHHHHhcCCCCCeEEEECCCCCCccChHHHHHHHHHcCCC--EEECcCCCHHHHHHHHH
Confidence 345788888888889999999999999966 2 35555543 34455778899988 8998544 444333333
No 242
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=39.78 E-value=1.1e+02 Score=37.01 Aligned_cols=55 Identities=20% Similarity=0.268 Sum_probs=34.3
Q ss_pred EEeeCCCcccCcEEEEeCCCcccccEEEEecee-eeecccCCCCCeeeEecCCCeeeeceEEee
Q 001837 206 EEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGKC-EVDEKTLTGESYPVSKQKGSTVWAGTINLN 268 (1007)
Q Consensus 206 ~~V~~~dLv~GDIV~L~~Ge~VPaDgiVl~G~~-~VDES~LTGES~Pv~K~~g~~V~aGT~v~~ 268 (1007)
..+...|.+|-|.++++. ..-+|=-.+.|+. .+.-. .|+. ...|..++.|+..+.
T Consensus 58 v~v~~G~~iP~Dg~vl~g--~~~vdes~LTGEs~pv~k~--~g~~----v~~gs~~~~G~~~~~ 113 (499)
T TIGR01494 58 VLVKSGEIVPADGVLLSG--SCFVDESNLTGESVPVLKT--AGDA----VFAGTYVFNGTLIVV 113 (499)
T ss_pred EEECCCCEeeeeEEEEEc--cEEEEcccccCCCCCeeec--cCCc----cccCcEEeccEEEEE
Confidence 678888888888888865 3444555556652 22221 1432 257788888887664
No 243
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=39.70 E-value=6.5e+02 Score=33.09 Aligned_cols=17 Identities=12% Similarity=0.079 Sum_probs=8.3
Q ss_pred EEeeCCCcccCcEEEEe
Q 001837 206 EEVDAGEVKLNTVLAVK 222 (1007)
Q Consensus 206 ~~V~~~dLv~GDIV~L~ 222 (1007)
..+...|.+|-|.++++
T Consensus 141 v~l~~Gd~IPaDg~ii~ 157 (884)
T TIGR01522 141 VCLSVGDRVPADLRIVE 157 (884)
T ss_pred EEecCCCEEeeeEEEEE
Confidence 44444455555544444
No 244
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=39.46 E-value=5.1e+02 Score=31.98 Aligned_cols=18 Identities=22% Similarity=0.111 Sum_probs=8.6
Q ss_pred cEEEEeCCCcccccEEEE
Q 001837 217 TVLAVKAGEVIPIDGIVV 234 (1007)
Q Consensus 217 DIV~L~~Ge~VPaDgiVl 234 (1007)
....+..-|.+|-|.+++
T Consensus 65 ~~~~i~~~~l~~GDiv~v 82 (556)
T TIGR01525 65 SEEEVPVEELQVGDIVIV 82 (556)
T ss_pred eEEEEEHHHCCCCCEEEE
Confidence 344444445555554444
No 245
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=38.63 E-value=2e+02 Score=32.18 Aligned_cols=65 Identities=9% Similarity=-0.027 Sum_probs=49.0
Q ss_pred cCCCCCeEEEEEECCEEEEEEEecC--cccccHHHHHHHHHHC-CCeEEEEcCCCHHHHHHHHHHhCC
Q 001837 498 PKMKGNTIGYIFSGASPVGIFCLSD--ACRTGAAEAVNQLKSL-GIRTAMLTGDNQSAAMQAQEQLGN 562 (1007)
Q Consensus 498 ~~~~g~~~i~v~~d~~~lGli~l~D--~lR~~a~eaI~~Lr~a-GIkv~mlTGD~~~tA~~vA~~lGI 562 (1007)
+.....+.+++..|+++..++-.-+ .+-++..+++++|... ..-++|+||-+..-......-.||
T Consensus 13 ~~~a~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i 80 (266)
T COG1877 13 YLNARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGI 80 (266)
T ss_pred cccccceEEEEeccccccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCc
Confidence 4444567777888888777665554 5677899999999987 567999999999888777664443
No 246
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=38.20 E-value=36 Score=32.89 Aligned_cols=40 Identities=18% Similarity=0.301 Sum_probs=30.9
Q ss_pred ccccHHHHHHHHHHCCCe-EEEEcCCCHHHHHHHHHHhCCC
Q 001837 524 CRTGAAEAVNQLKSLGIR-TAMLTGDNQSAAMQAQEQLGNA 563 (1007)
Q Consensus 524 lR~~a~eaI~~Lr~aGIk-v~mlTGD~~~tA~~vA~~lGI~ 563 (1007)
+.+.+.+.++++.+.|++ +|+.+|.....+...|++.|+.
T Consensus 64 ~~~~~~~~v~~~~~~g~~~v~~~~g~~~~~~~~~a~~~gi~ 104 (116)
T PF13380_consen 64 PPDKVPEIVDEAAALGVKAVWLQPGAESEELIEAAREAGIR 104 (116)
T ss_dssp -HHHHHHHHHHHHHHT-SEEEE-TTS--HHHHHHHHHTT-E
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEcchHHHHHHHHHHHcCCE
Confidence 466889999999999997 8999999999999999999985
No 247
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=38.20 E-value=3.2e+02 Score=36.07 Aligned_cols=255 Identities=12% Similarity=0.111 Sum_probs=115.9
Q ss_pred cccccccccccccCCCchHHHHHHHHHHHHHHHHhhhhHHHHHHHhhhhchHHHHHHHHHHHHcCcccHHHHHHHHHHHH
Q 001837 75 ANVRAYGGTSYQKKWPSPYAMACGVLLAISILKYVYHPLRWFALGAVAIGIFPIILKGLAAIRNFKLDINILVLIAVIGT 154 (1007)
Q Consensus 75 as~~~~g~~~~~~~~~~~~~~~~gill~isl~~~~~~~l~~l~l~~~~~~~~p~~~~a~~~l~~~~l~i~~Li~ia~~~~ 154 (1007)
.+...+|.|........+++. .++..|.+|+.++++.+++++. +...|....
T Consensus 52 ~r~~~~G~N~~~~~~~~~~~~--------~fl~~f~~~~~~iL~~~a~~s~---~~~~~~~~~----------------- 103 (917)
T COG0474 52 RRLKKYGPNELPEEKKRSLLK--------KFLRQFKDPFIILLLVAALLSA---FVGDWVDAG----------------- 103 (917)
T ss_pred HHHhhcCCccccccccCcHHH--------HHHHHHHHHHHHHHHHHHHHHH---HhhcccccC-----------------
Confidence 344567887776555544433 2455566777766555443332 111110000
Q ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcce------EE------ecCCEEeeCCCcccCcEEEEe
Q 001837 155 IAMNDYIEAGIIVFLFTIAEWLESRASHKATAVMSSLMSIAPQKA------II------AGTGEEVDAGEVKLNTVLAVK 222 (1007)
Q Consensus 155 ~~~~~y~~a~~Il~l~~i~~~le~~~~~k~~~~l~~L~~~~p~~~------~V------~rdg~~V~~~dLv~GDIV~L~ 222 (1007)
...++-..++++..+++ +.+.+...++-+.++++........ .+ .+|=..+...|.+|-|..+|+
T Consensus 104 --~~~~~I~~~i~~n~~~g-~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~ 180 (917)
T COG0474 104 --VDAIVILLVVVINALLG-FVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLE 180 (917)
T ss_pred --cceeeehHHHHHHHHHH-HHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEE
Confidence 11122223333444444 4555555666666777655433221 11 123378889999999999999
Q ss_pred CCCcccccEEEEecee-eeecccC--CCCCe------eeEecCCCeeeeceEEeeeeEEEEEEEEecceEEehhHHHHHH
Q 001837 223 AGEVIPIDGIVVDGKC-EVDEKTL--TGESY------PVSKQKGSTVWAGTINLNGYISVETTAVAEDCVVAKMAKLVEE 293 (1007)
Q Consensus 223 ~Ge~VPaDgiVl~G~~-~VDES~L--TGES~------Pv~K~~g~~V~aGT~v~~G~~~~~V~~tG~~T~~gki~~lv~~ 293 (1007)
..+ .-+|=-.|.|+. -|+-... +.|.. .-.--.|..|..|+-..--..++.-|..|..+....-.+ ..
T Consensus 181 ~~~-l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~--~~ 257 (917)
T COG0474 181 SSD-LEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKK--EV 257 (917)
T ss_pred ecC-ceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhcccc--cc
Confidence 877 455555556652 2211111 10111 112246888888874443334444444454432211110 11
Q ss_pred hhccchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHh-cCCchhHHHHHHhhhhhhhccccchhhHHHHHHH
Q 001837 294 AQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIAL-GVSNHKQWFHLALVVLVSACPCALILSTPVVTYC 364 (1007)
Q Consensus 294 a~~~ks~lq~~~~~i~~~~~~i~l~ia~l~~l~~~~~-~~~~~~~~~~~al~vLv~a~P~aL~l~i~la~~~ 364 (1007)
...-...+.+....+..+...+.++..++. ++..-. ....+...+..+++++=-+.|..+-++..++...
T Consensus 258 ~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~ 328 (917)
T COG0474 258 KTPLQRKLNKLGKFLLVLALVLGALVFVVG-LFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQR 328 (917)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHH
Confidence 111122333333333333222222222222 221000 0011233455566666666666666666665443
No 248
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=37.55 E-value=1.5e+02 Score=33.69 Aligned_cols=42 Identities=24% Similarity=0.460 Sum_probs=24.1
Q ss_pred CcccccHHHHHHHHHHC-CCeE---EEEcCCCHHHHH------HHHHHhCCC
Q 001837 522 DACRTGAAEAVNQLKSL-GIRT---AMLTGDNQSAAM------QAQEQLGNA 563 (1007)
Q Consensus 522 D~lR~~a~eaI~~Lr~a-GIkv---~mlTGD~~~tA~------~vA~~lGI~ 563 (1007)
.+++.++++.++.|++. |+++ +++-||++.... ..|+++||.
T Consensus 12 ~~i~~~i~~~v~~l~~~~g~~p~La~i~vg~~~~s~~Yv~~k~k~a~~~Gi~ 63 (296)
T PRK14188 12 ADVRATVAAEVARLKAAHGVTPGLAVVLVGEDPASQVYVRSKGKQTKEAGMA 63 (296)
T ss_pred HHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCE
Confidence 44566667777777665 5553 444566655443 345566654
No 249
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=36.93 E-value=8.3e+02 Score=31.15 Aligned_cols=82 Identities=16% Similarity=0.031 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hccCCcceEEecCCEEeeCCCcccCc-EEEEeCCCcccccEEEEe-c
Q 001837 160 YIEAGIIVFLFTIAEWLESRASHKATAVMSSL-MSIAPQKAIIAGTGEEVDAGEVKLNT-VLAVKAGEVIPIDGIVVD-G 236 (1007)
Q Consensus 160 y~~a~~Il~l~~i~~~le~~~~~k~~~~l~~L-~~~~p~~~~V~rdg~~V~~~dLv~GD-IV~L~~Ge~VPaDgiVl~-G 236 (1007)
+.....+.+++++..++..+.+..++..-++- ..+... ..+- .+.-++-|. ...+...|.+|=|.++++ |
T Consensus 62 ~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l----~~~~---~a~vir~g~~~~~V~~~eL~~GDiV~v~~G 134 (679)
T PRK01122 62 AGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGA----KKDT---FARKLREPGAAEEVPATELRKGDIVLVEAG 134 (679)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----CCCC---eEEEEECCCEEEEEEHHHcCCCCEEEEcCC
Confidence 34556677777888888888887766544433 333211 1111 111233455 788999999999998885 5
Q ss_pred e-eeeecccCCCC
Q 001837 237 K-CEVDEKTLTGE 248 (1007)
Q Consensus 237 ~-~~VDES~LTGE 248 (1007)
+ .-+|--.+.|+
T Consensus 135 d~IPaDG~vieG~ 147 (679)
T PRK01122 135 EIIPADGEVIEGV 147 (679)
T ss_pred CEEEEEEEEEEcc
Confidence 5 56666666664
No 250
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=36.84 E-value=1.5e+02 Score=33.38 Aligned_cols=63 Identities=16% Similarity=0.201 Sum_probs=33.1
Q ss_pred EeccCHhHHHHHHHHHhh--CC-eEEEEcCCcc-C---HHHHhhCCeeEEeCCCCc-H--HHHhhcCEEEecC
Q 001837 568 HSELLPEDKAKIINQFKQ--EG-KTAMIGDGIN-D---APALATADIGISMGISGS-A--LATETGQVILMSN 630 (1007)
Q Consensus 568 ~ar~sPeqK~~iV~~Lq~--~G-~VamVGDG~N-D---a~ALk~ADVGIAmg~~gs-~--~A~~aADiVLl~~ 630 (1007)
|.-+||..=.++++..+- .| .|+.+|.|.. = +.+|...+.-+.+-.+.+ + .....||+++.--
T Consensus 137 ~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~~~~~~ADIVV~av 209 (285)
T PRK14189 137 FRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLAAHTRQADIVVAAV 209 (285)
T ss_pred CcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHHHHhhhCCEEEEcC
Confidence 344566555555555432 25 7999999855 2 224444443333221222 2 2456788888653
No 251
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=36.24 E-value=4.1e+02 Score=26.35 Aligned_cols=96 Identities=16% Similarity=0.109 Sum_probs=64.6
Q ss_pred EEEEEEecCcccccHHHHHHHHHHCCCeEEEEcCC-CHHHHHHHHHHhCCCcceE-Eecc---CHhHHHHHHHHHhhCC-
Q 001837 514 PVGIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGD-NQSAAMQAQEQLGNALNVV-HSEL---LPEDKAKIINQFKQEG- 587 (1007)
Q Consensus 514 ~lGli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD-~~~tA~~vA~~lGI~~~~V-~ar~---sPeqK~~iV~~Lq~~G- 587 (1007)
++|.+.. |--..++.=.-..|+.+|++|+-+-+| .++...+.|++-+-+ .| .+-+ ..+.=..+++.|++.|
T Consensus 6 ~~a~~g~-D~Hd~g~~iv~~~l~~~GfeVi~lg~~~s~e~~v~aa~e~~ad--ii~iSsl~~~~~~~~~~~~~~L~~~g~ 82 (132)
T TIGR00640 6 LVAKMGQ-DGHDRGAKVIATAYADLGFDVDVGPLFQTPEEIARQAVEADVH--VVGVSSLAGGHLTLVPALRKELDKLGR 82 (132)
T ss_pred EEEeeCC-CccHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCC--EEEEcCchhhhHHHHHHHHHHHHhcCC
Confidence 4555555 666667777778899999999999887 445555666666554 22 2332 3566778889999875
Q ss_pred --eEEEEcC--CccCHHHHhhCCeeEEeC
Q 001837 588 --KTAMIGD--GINDAPALATADIGISMG 612 (1007)
Q Consensus 588 --~VamVGD--G~NDa~ALk~ADVGIAmg 612 (1007)
...++|- ...|...|++++|-=-++
T Consensus 83 ~~i~vivGG~~~~~~~~~l~~~Gvd~~~~ 111 (132)
T TIGR00640 83 PDILVVVGGVIPPQDFDELKEMGVAEIFG 111 (132)
T ss_pred CCCEEEEeCCCChHhHHHHHHCCCCEEEC
Confidence 4677774 444678888888743343
No 252
>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]
Probab=35.86 E-value=87 Score=36.67 Aligned_cols=85 Identities=25% Similarity=0.354 Sum_probs=62.1
Q ss_pred CCEEEEEEEecCcccccHHHHHHHHHHCCCe--EEEEc-CCCHHHHHHHHHHhCCCcceEEeccCHhHHHHHHHHHhhCC
Q 001837 511 GASPVGIFCLSDACRTGAAEAVNQLKSLGIR--TAMLT-GDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEG 587 (1007)
Q Consensus 511 d~~~lGli~l~D~lR~~a~eaI~~Lr~aGIk--v~mlT-GD~~~tA~~vA~~lGI~~~~V~ar~sPeqK~~iV~~Lq~~G 587 (1007)
++++.|-|-+ .|+.-++++|.+.+-+ |+--| |.....+..-|+++|+....|.-..+|..|.+- +|..|
T Consensus 89 ~lQpsgSFK~-----RGa~~~~~kla~~~~~~gViasSaGNha~a~Ayaa~~LgipaTIVmP~~tp~~kiq~---~~nlG 160 (457)
T KOG1250|consen 89 DLQPSGSFKI-----RGAGNALQKLAKQQKKAGVIASSAGNHAQAAAYAARKLGIPATIVMPVATPLMKIQR---CRNLG 160 (457)
T ss_pred hcccccceeh-----hhHHHHHHHHHHhhhcCceEEecCccHHHHHHHHHHhcCCceEEEecCCChHHHHHH---HhccC
Confidence 4566666554 3788899999888755 44445 455556666789999998899999999988655 45667
Q ss_pred -eEEEEcCCccCHHHHh
Q 001837 588 -KTAMIGDGINDAPALA 603 (1007)
Q Consensus 588 -~VamVGDG~NDa~ALk 603 (1007)
.|...|+....+-++.
T Consensus 161 A~Vil~G~~~deAk~~a 177 (457)
T KOG1250|consen 161 ATVILSGEDWDEAKAFA 177 (457)
T ss_pred CEEEEecccHHHHHHHH
Confidence 8999999876655443
No 253
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=35.70 E-value=2.7e+02 Score=30.84 Aligned_cols=91 Identities=18% Similarity=0.275 Sum_probs=54.8
Q ss_pred EecCcccccHHHHHHHHHHCCCeEE-EEcCCC-HHHHHHHHHHhC-CCcceEEec-----c---CHhHHHHHHHHHhhC-
Q 001837 519 CLSDACRTGAAEAVNQLKSLGIRTA-MLTGDN-QSAAMQAQEQLG-NALNVVHSE-----L---LPEDKAKIINQFKQE- 586 (1007)
Q Consensus 519 ~l~D~lR~~a~eaI~~Lr~aGIkv~-mlTGD~-~~tA~~vA~~lG-I~~~~V~ar-----~---sPeqK~~iV~~Lq~~- 586 (1007)
.+-|.+-++..+.++.+++.|++.+ +++=.. ......+++... .. -+.++ . .+.+=...|+.+++.
T Consensus 120 iipDlp~ee~~~~~~~~~~~gl~~i~lv~P~T~~eri~~i~~~~~gfi--y~vs~~G~TG~~~~~~~~~~~~i~~lr~~~ 197 (256)
T TIGR00262 120 LVADLPLEESGDLVEAAKKHGVKPIFLVAPNADDERLKQIAEKSQGFV--YLVSRAGVTGARNRAASALNELVKRLKAYS 197 (256)
T ss_pred EECCCChHHHHHHHHHHHHCCCcEEEEECCCCCHHHHHHHHHhCCCCE--EEEECCCCCCCcccCChhHHHHHHHHHhhc
Confidence 3446666788999999999999955 666544 345566777654 43 22221 1 233455667777765
Q ss_pred CeEEEEcCCccC---HHHHhh--CCeeEEeC
Q 001837 587 GKTAMIGDGIND---APALAT--ADIGISMG 612 (1007)
Q Consensus 587 G~VamVGDG~ND---a~ALk~--ADVGIAmg 612 (1007)
+.-.++|=|++. +..+.+ || |+-+|
T Consensus 198 ~~pi~vgfGI~~~e~~~~~~~~GAD-gvVvG 227 (256)
T TIGR00262 198 AKPVLVGFGISKPEQVKQAIDAGAD-GVIVG 227 (256)
T ss_pred CCCEEEeCCCCCHHHHHHHHHcCCC-EEEEC
Confidence 344667999984 444333 45 44444
No 254
>COG2177 FtsX Cell division protein [Cell division and chromosome partitioning]
Probab=35.61 E-value=7.1e+02 Score=28.32 Aligned_cols=49 Identities=20% Similarity=0.271 Sum_probs=34.7
Q ss_pred chHHHHHHHHHhCCCCeeEEEE------------------------ecCCCeEEEEEcCCcccHHHHHHHhhhc
Q 001837 22 SSEVPLIENILKSLEGVKEVSV------------------------IVPSRTVIVLHDALLISQHQIVKALNQA 71 (1007)
Q Consensus 22 ~~Ca~~IE~~L~~l~GV~~v~V------------------------n~~t~tv~V~~D~~~~s~~~I~~aL~~a 71 (1007)
..|+..+++.++..|||++++. |+.-..+.|+.++. ....++.+.+++.
T Consensus 71 ~~~~~~v~~~i~~~~gV~~v~~~sre~~l~~L~~~lg~~~~~~l~~nPLP~~~vV~~~~p-~~~~~i~~~l~~l 143 (297)
T COG2177 71 QDDAALVREKIEGIPGVKSVRFISREEALKELQPWLGFGALLMLDENPLPDVFVVTPDDP-PQVKAIAAALRDL 143 (297)
T ss_pred hHHHHHHHHHHhcCCCcceEEEeCHHHHHHHHHHHcCchhhhcCCCCCCCceEEEEeCCC-ccHHHHHHHHHcC
Confidence 8999999999999999998875 33334555555543 3456666666664
No 255
>PRK04302 triosephosphate isomerase; Provisional
Probab=35.50 E-value=3.5e+02 Score=29.09 Aligned_cols=85 Identities=18% Similarity=0.296 Sum_probs=55.8
Q ss_pred ccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEEec-------------cCHhHHHHHHHHHhhC--Ce
Q 001837 524 CRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSE-------------LLPEDKAKIINQFKQE--GK 588 (1007)
Q Consensus 524 lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~ar-------------~sPeqK~~iV~~Lq~~--G~ 588 (1007)
+-.++.+.++.+++.|+.+++.+|+.. .+.. +.+.+.+ .|+.. .+|++-.++++.+++. +.
T Consensus 99 ~~~e~~~~v~~a~~~Gl~~I~~v~~~~-~~~~-~~~~~~~--~I~~~p~~~igt~~~~~~~~~~~i~~~~~~ir~~~~~~ 174 (223)
T PRK04302 99 TLADIEAVVERAKKLGLESVVCVNNPE-TSAA-AAALGPD--YVAVEPPELIGTGIPVSKAKPEVVEDAVEAVKKVNPDV 174 (223)
T ss_pred CHHHHHHHHHHHHHCCCeEEEEcCCHH-HHHH-HhcCCCC--EEEEeCccccccCCCCCcCCHHHHHHHHHHHHhccCCC
Confidence 344688999999999999999999843 3333 3344433 33321 3578877888888874 35
Q ss_pred EEEEcCCccCHHHH---hhCCe-eEEeC
Q 001837 589 TAMIGDGINDAPAL---ATADI-GISMG 612 (1007)
Q Consensus 589 VamVGDG~NDa~AL---k~ADV-GIAmg 612 (1007)
..+.|-|+++.... .++++ |+.+|
T Consensus 175 pvi~GggI~~~e~~~~~~~~gadGvlVG 202 (223)
T PRK04302 175 KVLCGAGISTGEDVKAALELGADGVLLA 202 (223)
T ss_pred EEEEECCCCCHHHHHHHHcCCCCEEEEe
Confidence 56779998665443 34544 67676
No 256
>PRK10019 nickel/cobalt efflux protein RcnA; Provisional
Probab=35.35 E-value=1.4e+02 Score=33.65 Aligned_cols=22 Identities=14% Similarity=0.270 Sum_probs=12.6
Q ss_pred HHHHHHHHHHHHhhhhhccccc
Q 001837 679 LADVGTCLIVILNSMLLLHETH 700 (1007)
Q Consensus 679 l~~~~s~l~vvlNSlrll~~~~ 700 (1007)
.+...+.+++++=.++++++..
T Consensus 89 ~le~~S~~lii~lGl~ll~r~~ 110 (279)
T PRK10019 89 WLQLISAVIIISTAFWMFWRTW 110 (279)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3344566666666666665433
No 257
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=34.97 E-value=2.3e+02 Score=31.87 Aligned_cols=62 Identities=16% Similarity=0.279 Sum_probs=33.8
Q ss_pred EeccCHhHHHHHHHHHhh--CC-eEEEEcCCccC----HHHHhhCCeeEEeCCCCc-HH--HHhhcCEEEec
Q 001837 568 HSELLPEDKAKIINQFKQ--EG-KTAMIGDGIND----APALATADIGISMGISGS-AL--ATETGQVILMS 629 (1007)
Q Consensus 568 ~ar~sPeqK~~iV~~Lq~--~G-~VamVGDG~ND----a~ALk~ADVGIAmg~~gs-~~--A~~aADiVLl~ 629 (1007)
|.-+||..=.++++...- .| .|+++|.+..= +.+|.+.+.-+.+-.+.+ +. ....|||++.-
T Consensus 137 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l~~~~~~ADIvIsA 208 (278)
T PRK14172 137 FLPCTPNSVITLIKSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNLKEVCKKADILVVA 208 (278)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 445677776677766643 36 79999987432 224444443333321222 22 23568887754
No 258
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=34.84 E-value=6e+02 Score=31.21 Aligned_cols=146 Identities=12% Similarity=0.119 Sum_probs=71.1
Q ss_pred EEeeCCCcccCcEEEEeCCCcccccEEEEeceee-eecccCCCCCeeeEecCCCeeeeceEEeeeeEEEEEEEEecceEE
Q 001837 206 EEVDAGEVKLNTVLAVKAGEVIPIDGIVVDGKCE-VDEKTLTGESYPVSKQKGSTVWAGTINLNGYISVETTAVAEDCVV 284 (1007)
Q Consensus 206 ~~V~~~dLv~GDIV~L~~Ge~VPaDgiVl~G~~~-VDES~LTGES~Pv~K~~g~~V~aGT~v~~G~~~~~V~~tG~~T~~ 284 (1007)
..+...|.+|-|-++++. + .-+|=-.+.|+.. +.-. .|+. .-.|..+..|+....=.-.+.=+..|. +
T Consensus 79 v~v~~G~~iP~Dg~ii~g-~-~~vdes~lTGEs~pv~k~--~g~~----v~aGt~v~~G~~~~~V~~~g~~t~~~~---i 147 (536)
T TIGR01512 79 VVVKPGERVPVDGVVLSG-T-STVDESALTGESVPVEKA--PGDE----VFAGAINLDGVLTIVVTKLPADSTIAK---I 147 (536)
T ss_pred EEEcCCCEeecceEEEeC-c-EEEEecccCCCCCcEEeC--CCCE----EEeeeEECCceEEEEEEEeccccHHHH---H
Confidence 678888888888888873 2 2355555555522 2111 2332 345667777776554222222233332 2
Q ss_pred ehhHHHHHHhhc-cchHHHHHHHHHHHhHhHHHHHHHHHHHHHH-HHhcCCchhHHHHHHhhhhhhhccccchhhHHHHH
Q 001837 285 AKMAKLVEEAQN-SKSRIQRFVDKFSQYYTPAVIFISACVAVIP-IALGVSNHKQWFHLALVVLVSACPCALILSTPVVT 362 (1007)
Q Consensus 285 gki~~lv~~a~~-~ks~lq~~~~~i~~~~~~i~l~ia~l~~l~~-~~~~~~~~~~~~~~al~vLv~a~P~aL~l~i~la~ 362 (1007)
.++.+.....+. -...+++...++......+.+++.++..+.. +.+ .+...+...+...-.+.|.+.++++..+.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~svlv~~~P~aL~la~~~~~~~~~ 224 (536)
T TIGR01512 148 VNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLKRWPF---WVYRALVLLVVASPCALVISAPAAYLSAI 224 (536)
T ss_pred HHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHH---HHHHHHHHHhhcCccccccchHHHHHHHH
Confidence 233333332222 2334555566665554444333333322211 111 11223444555566666777777776666
Q ss_pred HHH
Q 001837 363 YCA 365 (1007)
Q Consensus 363 ~~a 365 (1007)
...
T Consensus 225 ~~~ 227 (536)
T TIGR01512 225 SAA 227 (536)
T ss_pred HHH
Confidence 543
No 259
>COG1862 YajC Preprotein translocase subunit YajC [Intracellular trafficking and secretion]
Probab=34.48 E-value=94 Score=29.35 Aligned_cols=17 Identities=18% Similarity=0.155 Sum_probs=8.2
Q ss_pred HHHHHHHHHHHHHHhhc
Q 001837 177 ESRASHKATAVMSSLMS 193 (1007)
Q Consensus 177 e~~~~~k~~~~l~~L~~ 193 (1007)
-.|-.+|..+..+++++
T Consensus 26 i~RPQrKr~K~~~~ml~ 42 (97)
T COG1862 26 IIRPQRKRMKEHQELLN 42 (97)
T ss_pred hcCHHHHHHHHHHHHHH
Confidence 34444444555555554
No 260
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=33.06 E-value=32 Score=37.31 Aligned_cols=82 Identities=13% Similarity=0.153 Sum_probs=50.6
Q ss_pred cccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH------------hCCCcceEEeccCHhHHHHHHHHHhhC-C-eEE
Q 001837 525 RTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQ------------LGNALNVVHSELLPEDKAKIINQFKQE-G-KTA 590 (1007)
Q Consensus 525 R~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~------------lGI~~~~V~ar~sPeqK~~iV~~Lq~~-G-~Va 590 (1007)
-+++.++++.|++.|++. ++|..+...+...... .|-. ...+..-.|+-=..+.+.+... . .++
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g~~~~~i~~~g~~-~~~~gKP~~~~~~~~~~~~~~~~~~~~~ 217 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAGYYAELIKQLGGK-VIYSGKPYPAIFHKALKECSNIPKNRML 217 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEecccHHHHHHHHhCCc-EecCCCCCHHHHHHHHHHcCCCCcccEE
Confidence 478999999999999997 6676544333211111 2222 0123333343334455555432 2 699
Q ss_pred EEcCC-ccCHHHHhhCCee
Q 001837 591 MIGDG-INDAPALATADIG 608 (1007)
Q Consensus 591 mVGDG-~NDa~ALk~ADVG 608 (1007)
||||. .+|..+-++|++-
T Consensus 218 ~vGD~~~~Di~~a~~~G~~ 236 (242)
T TIGR01459 218 MVGDSFYTDILGANRLGID 236 (242)
T ss_pred EECCCcHHHHHHHHHCCCe
Confidence 99999 5999998888874
No 261
>PF01206 TusA: Sulfurtransferase TusA; InterPro: IPR001455 SirA functions as a response regulator as part of a two-component system, where BarA is the sensor kinase. This system increases the expression of virulence genes and decreases the expression of motility genes []. BarA phosphorylates SirA, thereby activating the protein. Phosphorylated SirA directly activates virulence expression by interacting with hilA and hilC promoters, while repressing the flagellar regulon indirectly by binding to the csrB promoter, which in turn affects flagellar gene expression. Orthologues of SirA from Salmonella spp. can be found throughout proteobacteria, such as GacA in Psuedomonas spp., VarA in Vibrio cholerae, ExpA in Erwinia carotovora, LetA in Legionella pneumophila, and UvrY in Escherichia coli []. A sensor kinase for SirA is present in each of these organisms as well; the sensor kinase is known as BarA in E. coli and Salmonella spp., but has different names in other genera. In different species, SirA/BarA orthologues are required for virulence gene expression, exoenzyme and antibiotic production, motility, and biofilm formation. The structure of SirA consists of an alpha/beta sandwich with a beta-alpha-beta-alpha-beta(2) fold, comprising a mixed four-stranded beta-sheet stacked against two alpha-helices, both of which are nearly parallel to the strands of the beta-sheet []. Several uncharacterised bacterial proteins (73 to 81 amino-acid residues in length) that contain a well-conserved region in their N-terminal region show structural similarity to the SirA protein, including the E. coli protein YedF (P0AA31 from SWISSPROT), and other members of the UPF0033 family.; GO: 0016783 sulfurtransferase activity, 0008033 tRNA processing, 0005737 cytoplasm; PDB: 3LVJ_D 3LVK_B 1DCJ_A 3HZ7_A 1JDQ_A 1JE3_A 1PAV_A.
Probab=33.02 E-value=1.4e+02 Score=25.76 Aligned_cols=56 Identities=20% Similarity=0.244 Sum_probs=42.5
Q ss_pred EEEEecCCCCchHHHHHHHHHhCCCCeeEEEEecCCCeEEEEEcCCcccHHHHHHHhhhccccccc
Q 001837 12 SYFDVLGICCSSEVPLIENILKSLEGVKEVSVIVPSRTVIVLHDALLISQHQIVKALNQARFEANV 77 (1007)
Q Consensus 12 ~~l~V~Gm~C~~Ca~~IE~~L~~l~GV~~v~Vn~~t~tv~V~~D~~~~s~~~I~~aL~~aGy~as~ 77 (1007)
+++++.|+.||...-.+.++|+.++.= ..+.|..|.. .+.++|...++..||....
T Consensus 1 ~~lD~rg~~CP~Pll~~~~~l~~l~~G---------~~l~v~~d~~-~~~~di~~~~~~~g~~~~~ 56 (70)
T PF01206_consen 1 KTLDLRGLSCPMPLLKAKKALKELPPG---------EVLEVLVDDP-AAVEDIPRWCEENGYEVVE 56 (70)
T ss_dssp EEEECSS-STTHHHHHHHHHHHTSGTT----------EEEEEESST-THHHHHHHHHHHHTEEEEE
T ss_pred CEEeCCCCCCCHHHHHHHHHHHhcCCC---------CEEEEEECCc-cHHHHHHHHHHHCCCEEEE
Confidence 368899999999999999999997532 3455666654 3678999999999997443
No 262
>PF00763 THF_DHG_CYH: Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; InterPro: IPR020630 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the N-terminal catalytic domain of these enzymes. ; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 2C2X_B 2C2Y_A 1EDZ_A 1EE9_A 4A26_B 3NGL_C 3NGX_A 1B0A_A 1DIA_A 1A4I_B ....
Probab=32.63 E-value=77 Score=30.68 Aligned_cols=66 Identities=21% Similarity=0.464 Sum_probs=44.4
Q ss_pred cCcccccHHHHHHHHHHCCCeE---EEEcCCCHHHHH------HHHHHhCCCcceE--EeccCHhHHHHHHHHHhhC
Q 001837 521 SDACRTGAAEAVNQLKSLGIRT---AMLTGDNQSAAM------QAQEQLGNALNVV--HSELLPEDKAKIINQFKQE 586 (1007)
Q Consensus 521 ~D~lR~~a~eaI~~Lr~aGIkv---~mlTGD~~~tA~------~vA~~lGI~~~~V--~ar~sPeqK~~iV~~Lq~~ 586 (1007)
...++.++++-|+.|++.|+++ +++-||++.+.. ..|+++||....+ -...+.++=...|+.|-+.
T Consensus 9 a~~i~~~l~~~i~~l~~~~~~P~Laii~vg~d~~S~~Y~~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~i~~lN~D 85 (117)
T PF00763_consen 9 AKEIKEELKEEIEKLKEKGITPKLAIILVGDDPASISYVRSKQKAAEKLGIEFELIELPEDISEEELLELIEKLNED 85 (117)
T ss_dssp HHHHHHHHHHHHHHHHHCT---EEEEEEES--HHHHHHHHHHHHHHHHHT-EEEEEEE-TTSSHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEEecCCChhHHHHHHHHHHHHHHcCCceEEEECCCCcCHHHHHHHHHHHhCC
Confidence 3567889999999999999884 566799988765 4588999985432 2456777778888888765
No 263
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=32.60 E-value=3.2e+02 Score=30.49 Aligned_cols=81 Identities=15% Similarity=0.168 Sum_probs=52.5
Q ss_pred EEecCcccccHHHHHHHHHHCCCeE-EEEcCCC-HHHHHHHHHHhC-CCcceEEec--------cCHhHHHHHHHHHhhC
Q 001837 518 FCLSDACRTGAAEAVNQLKSLGIRT-AMLTGDN-QSAAMQAQEQLG-NALNVVHSE--------LLPEDKAKIINQFKQE 586 (1007)
Q Consensus 518 i~l~D~lR~~a~eaI~~Lr~aGIkv-~mlTGD~-~~tA~~vA~~lG-I~~~~V~ar--------~sPeqK~~iV~~Lq~~ 586 (1007)
+.+-|-+-++..+.++.+++.|+.. .+++=.. ...-..+++... +. -+.++ ..|++-..+++.+|+.
T Consensus 123 viipDLP~ee~~~~~~~~~~~gi~~I~lv~PtT~~eri~~i~~~a~gFI--Y~vS~~GvTG~~~~~~~~~~~~i~~ir~~ 200 (263)
T CHL00200 123 LIIPDLPYEESDYLISVCNLYNIELILLIAPTSSKSRIQKIARAAPGCI--YLVSTTGVTGLKTELDKKLKKLIETIKKM 200 (263)
T ss_pred EEecCCCHHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHhCCCcE--EEEcCCCCCCCCccccHHHHHHHHHHHHh
Confidence 3455666688889999999999984 4555443 456667777764 33 12122 2255667778888876
Q ss_pred -CeEEEEcCCccCHH
Q 001837 587 -GKTAMIGDGINDAP 600 (1007)
Q Consensus 587 -G~VamVGDG~NDa~ 600 (1007)
+.-.+||=|+|+..
T Consensus 201 t~~Pi~vGFGI~~~e 215 (263)
T CHL00200 201 TNKPIILGFGISTSE 215 (263)
T ss_pred cCCCEEEECCcCCHH
Confidence 34566799999544
No 264
>PRK13670 hypothetical protein; Provisional
Probab=32.36 E-value=2.8e+02 Score=32.68 Aligned_cols=91 Identities=16% Similarity=0.205 Sum_probs=66.2
Q ss_pred EEEEEEEecCcccccHHHHHHHHHH---CCCeEEEEcCC----------CHHHHHHHHHHhCCCcc----eEEeccCHhH
Q 001837 513 SPVGIFCLSDACRTGAAEAVNQLKS---LGIRTAMLTGD----------NQSAAMQAQEQLGNALN----VVHSELLPED 575 (1007)
Q Consensus 513 ~~lGli~l~D~lR~~a~eaI~~Lr~---aGIkv~mlTGD----------~~~tA~~vA~~lGI~~~----~V~ar~sPeq 575 (1007)
..+|+|+=-|++-.|=...|+++++ +|..+++++|+ +...-..+|.++|++.- -.|+..+|++
T Consensus 2 k~~GIIaEfdg~H~GH~~~i~~a~~~a~~~~~~~Vmp~~f~qrg~p~i~~~~~R~~~a~~~GvD~vielpf~~a~~sae~ 81 (388)
T PRK13670 2 KVTGIIVEYNPFHNGHLYHLNQAKKLTNADVTIAVMSGNFVQRGEPAIVDKWTRAKMALENGVDLVVELPFLYSVQSADF 81 (388)
T ss_pred ceeEEEeeeCCcCHHHHHHHHHHHHHHhCCCcEEEecHHHhCCCCCCCCCHHHHHHHHHHcCCCEEEEeCCchHhCCHHH
Confidence 4689999999999998888877775 47778888887 55666788999998721 2378888887
Q ss_pred HHH-HHHHHhhCC-eEEEEcCCccCHHHHh
Q 001837 576 KAK-IINQFKQEG-KTAMIGDGINDAPALA 603 (1007)
Q Consensus 576 K~~-iV~~Lq~~G-~VamVGDG~NDa~ALk 603 (1007)
=++ -|+.|...| ..+.+|....|...|+
T Consensus 82 F~~~aV~iL~~l~v~~lv~G~e~g~~~~L~ 111 (388)
T PRK13670 82 FAEGAVSILDALGVDSLVFGSESGDIEDFQ 111 (388)
T ss_pred HHHhHHHHHHHcCCCEEEEcCCCCCHHHHH
Confidence 554 355665567 6777887755554444
No 265
>cd00958 DhnA Class I fructose-1,6-bisphosphate (FBP) aldolases of the archaeal type (DhnA homologs) found in bacteria and archaea. Catalysis of the enzymes proceeds via a Schiff-base mechanism like other class I aldolases, although this subfamily is clearly divergent based on sequence similarity to other class I and class II (metal dependent) aldolase subfamilies.
Probab=31.68 E-value=1.5e+02 Score=32.05 Aligned_cols=87 Identities=14% Similarity=0.176 Sum_probs=52.3
Q ss_pred CcccccHHHHHHHHHHCCCeEEE------------EcCCCHHHHHHHHHHhCCCcceEEeccCHhHHHHHHHHHhhC-C-
Q 001837 522 DACRTGAAEAVNQLKSLGIRTAM------------LTGDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQE-G- 587 (1007)
Q Consensus 522 D~lR~~a~eaI~~Lr~aGIkv~m------------lTGD~~~tA~~vA~~lGI~~~~V~ar~sPeqK~~iV~~Lq~~-G- 587 (1007)
+.....+.+..+.+++.|+++++ ++.+....+..+|.+.|-+ -|...-+. -.+.++.+.+. +
T Consensus 105 ~~~~~~i~~v~~~~~~~g~~~iie~~~~g~~~~~~~~~~~i~~~~~~a~~~GaD--~Ik~~~~~--~~~~~~~i~~~~~~ 180 (235)
T cd00958 105 REMLEELARVAAEAHKYGLPLIAWMYPRGPAVKNEKDPDLIAYAARIGAELGAD--IVKTKYTG--DAESFKEVVEGCPV 180 (235)
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEEeccCCcccCccCHHHHHHHHHHHHHHCCC--EEEecCCC--CHHHHHHHHhcCCC
Confidence 34455777777778889999765 1223344456678888988 66664332 23445555444 3
Q ss_pred eEEEEcC-CccC-------HHHHhhCCe-eEEeC
Q 001837 588 KTAMIGD-GIND-------APALATADI-GISMG 612 (1007)
Q Consensus 588 ~VamVGD-G~ND-------a~ALk~ADV-GIAmg 612 (1007)
.|.+.|- +..| +..+.++++ ||++|
T Consensus 181 pvv~~GG~~~~~~~~~l~~~~~~~~~Ga~gv~vg 214 (235)
T cd00958 181 PVVIAGGPKKDSEEEFLKMVYDAMEAGAAGVAVG 214 (235)
T ss_pred CEEEeCCCCCCCHHHHHHHHHHHHHcCCcEEEec
Confidence 5666664 5545 444455544 78887
No 266
>PRK05886 yajC preprotein translocase subunit YajC; Validated
Probab=31.18 E-value=2.5e+02 Score=27.16 Aligned_cols=25 Identities=24% Similarity=0.352 Sum_probs=11.9
Q ss_pred HHHHHHHHHHhh-ccCCcceEEecCC
Q 001837 181 SHKATAVMSSLM-SIAPQKAIIAGTG 205 (1007)
Q Consensus 181 ~~k~~~~l~~L~-~~~p~~~~V~rdg 205 (1007)
++|..+..+++. ++.+..-.+...|
T Consensus 25 QkKr~K~~~~m~~~Lk~GD~VvT~gG 50 (109)
T PRK05886 25 QRKAMQATIDLHESLQPGDRVHTTSG 50 (109)
T ss_pred HHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 334444444443 4555555555555
No 267
>PF11694 DUF3290: Protein of unknown function (DUF3290); InterPro: IPR021707 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=30.23 E-value=4.9e+02 Score=26.55 Aligned_cols=19 Identities=5% Similarity=0.078 Sum_probs=13.1
Q ss_pred CCEEeeCCCcccCcEEEEe
Q 001837 204 TGEEVDAGEVKLNTVLAVK 222 (1007)
Q Consensus 204 dg~~V~~~dLv~GDIV~L~ 222 (1007)
+...|.+..+.-|=||.++
T Consensus 97 ~~v~VNst~l~dG~iVki~ 115 (149)
T PF11694_consen 97 EEVYVNSTALTDGMIVKIG 115 (149)
T ss_pred heEEEecccccCCeEEEEC
Confidence 3366777777777777666
No 268
>cd00532 MGS-like MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase, which catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The family also includes the C-terminal domain in carbamoyl phosphate synthetase (CPS) where it catalyzes the last phosphorylation of a coaboxyphosphate intermediate to form the product carbamoyl phosphate and may also play a regulatory role. This family also includes inosine monophosphate cyclohydrolase. The known structures in this family show a common phosphate binding site.
Probab=30.17 E-value=2.1e+02 Score=27.21 Aligned_cols=74 Identities=15% Similarity=0.163 Sum_probs=51.1
Q ss_pred EEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEEeccCHh-HHHHHHHHHhh-CC--eEEEE
Q 001837 517 IFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSELLPE-DKAKIINQFKQ-EG--KTAMI 592 (1007)
Q Consensus 517 li~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~ar~sPe-qK~~iV~~Lq~-~G--~VamV 592 (1007)
++.+.|.-+++..+.+++|.+.|+++. .|+ .||..+.+ .|+....|..- ++ ....+++.+++ .. .|..+
T Consensus 3 ~isv~d~~K~~~~~~a~~l~~~G~~i~-AT~---gTa~~L~~-~Gi~~~~v~~~--~~~g~~~i~~~i~~~g~idlVIn~ 75 (112)
T cd00532 3 FLSVSDHVKAMLVDLAPKLSSDGFPLF-ATG---GTSRVLAD-AGIPVRAVSKR--HEDGEPTVDAAIAEKGKFDVVINL 75 (112)
T ss_pred EEEEEcccHHHHHHHHHHHHHCCCEEE-ECc---HHHHHHHH-cCCceEEEEec--CCCCCcHHHHHHhCCCCEEEEEEc
Confidence 578899999999999999999999995 665 36666654 78874433321 23 34668888877 44 35555
Q ss_pred cCCcc
Q 001837 593 GDGIN 597 (1007)
Q Consensus 593 GDG~N 597 (1007)
-||.+
T Consensus 76 ~~~~~ 80 (112)
T cd00532 76 RDPRR 80 (112)
T ss_pred CCCCc
Confidence 55444
No 269
>PLN02591 tryptophan synthase
Probab=29.97 E-value=4e+02 Score=29.51 Aligned_cols=86 Identities=17% Similarity=0.188 Sum_probs=55.8
Q ss_pred EEEEecCcccccHHHHHHHHHHCCCeE-EEEcCCC-HHHHHHHHHHh-CCCcceEEecc--------CHhHHHHHHHHHh
Q 001837 516 GIFCLSDACRTGAAEAVNQLKSLGIRT-AMLTGDN-QSAAMQAQEQL-GNALNVVHSEL--------LPEDKAKIINQFK 584 (1007)
Q Consensus 516 Gli~l~D~lR~~a~eaI~~Lr~aGIkv-~mlTGD~-~~tA~~vA~~l-GI~~~~V~ar~--------sPeqK~~iV~~Lq 584 (1007)
|+|.- |-+-++..+.++.+++.|+.. .++|-.. ......+++.. |+. -+.++. .|++-..+++.+|
T Consensus 109 Gviip-DLP~ee~~~~~~~~~~~gl~~I~lv~Ptt~~~ri~~ia~~~~gFI--Y~Vs~~GvTG~~~~~~~~~~~~i~~vk 185 (250)
T PLN02591 109 GLVVP-DLPLEETEALRAEAAKNGIELVLLTTPTTPTERMKAIAEASEGFV--YLVSSTGVTGARASVSGRVESLLQELK 185 (250)
T ss_pred EEEeC-CCCHHHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHhCCCcE--EEeeCCCCcCCCcCCchhHHHHHHHHH
Confidence 34333 444588889999999999985 5555555 35667777775 333 222322 2666677788888
Q ss_pred hCC-eEEEEcCCcc---CHHHHhh
Q 001837 585 QEG-KTAMIGDGIN---DAPALAT 604 (1007)
Q Consensus 585 ~~G-~VamVGDG~N---Da~ALk~ 604 (1007)
+.. .-.++|=|++ |+..+.+
T Consensus 186 ~~~~~Pv~vGFGI~~~e~v~~~~~ 209 (250)
T PLN02591 186 EVTDKPVAVGFGISKPEHAKQIAG 209 (250)
T ss_pred hcCCCceEEeCCCCCHHHHHHHHh
Confidence 864 6677899999 4455444
No 270
>TIGR00696 wecB_tagA_cpsF bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family. The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.
Probab=29.86 E-value=2.5e+02 Score=29.37 Aligned_cols=118 Identities=12% Similarity=0.118 Sum_probs=70.5
Q ss_pred HHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh-----CCCcceEEeccCHhHHHHHHHHHhhCC-eEEEEcCCccCHHH
Q 001837 528 AAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQL-----GNALNVVHSELLPEDKAKIINQFKQEG-KTAMIGDGINDAPA 601 (1007)
Q Consensus 528 a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~l-----GI~~~~V~ar~sPeqK~~iV~~Lq~~G-~VamVGDG~NDa~A 601 (1007)
+.+.++.+.+.|.++.++ |-.+.++...++.+ |+...-.+.-.+|++-..+++.+.+.+ .+++||=|.==-+.
T Consensus 37 ~~~l~~~~~~~~~~vfll-G~~~~v~~~~~~~l~~~yP~l~i~g~~g~f~~~~~~~i~~~I~~s~~dil~VglG~PkQE~ 115 (177)
T TIGR00696 37 MEELCQRAGKEKLPIFLY-GGKPDVLQQLKVKLIKEYPKLKIVGAFGPLEPEERKAALAKIARSGAGIVFVGLGCPKQEI 115 (177)
T ss_pred HHHHHHHHHHcCCeEEEE-CCCHHHHHHHHHHHHHHCCCCEEEEECCCCChHHHHHHHHHHHHcCCCEEEEEcCCcHhHH
Confidence 356677777889999988 66666766666665 332111123346788888999999998 89999998543222
Q ss_pred H-------hhCCeeEEeCCCCcHHH---HhhcCEEEecCCcchHHHHHHHHHHHHH
Q 001837 602 L-------ATADIGISMGISGSALA---TETGQVILMSNDIRKVPEAIRLARKAHW 647 (1007)
Q Consensus 602 L-------k~ADVGIAmg~~gs~~A---~~aADiVLl~~~l~~I~~lI~~gR~~~~ 647 (1007)
+ ....|.|++| ..-+.. ..-|.-.+-.-++..+.+++.+=|+..+
T Consensus 116 ~~~~~~~~~~~~v~~gvG-g~fd~~aG~~~rAP~w~~~~gLEWlyRl~~eP~R~~R 170 (177)
T TIGR00696 116 WMRNHRHLKPDAVMIGVG-GSFDVFSGLVKRAPRWLMRLGLEWLYRLRMEPWRWKR 170 (177)
T ss_pred HHHHhHHhCCCcEEEEec-eeeeecccCcCcCCHHHHHhCchHHHHhhhCcHHHHH
Confidence 1 1133555555 111111 1223333334467778888877666444
No 271
>TIGR00603 rad25 DNA repair helicase rad25. All proteins in this family for which functions are known are DNA-DNA helicases used for the initiation of nucleotide excision repair and transacription as part of the TFIIH complex.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=29.59 E-value=2.3e+02 Score=36.20 Aligned_cols=59 Identities=15% Similarity=0.280 Sum_probs=45.7
Q ss_pred HHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEEeccCHhHHHHHHHHHhhCC--eEEEE
Q 001837 531 AVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEG--KTAMI 592 (1007)
Q Consensus 531 aI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~ar~sPeqK~~iV~~Lq~~G--~VamV 592 (1007)
.|+.-...|-++++.+ |+...+..+++.+|.. .+.+.+++.+..++++.++..+ .|+++
T Consensus 488 Li~~he~~g~kiLVF~-~~~~~l~~~a~~L~~~--~I~G~ts~~ER~~il~~Fr~~~~i~vLv~ 548 (732)
T TIGR00603 488 LIRFHEQRGDKIIVFS-DNVFALKEYAIKLGKP--FIYGPTSQQERMQILQNFQHNPKVNTIFL 548 (732)
T ss_pred HHHHHhhcCCeEEEEe-CCHHHHHHHHHHcCCc--eEECCCCHHHHHHHHHHHHhCCCccEEEE
Confidence 3333334677888877 6677899999999976 8899999999999999999764 45544
No 272
>PTZ00445 p36-lilke protein; Provisional
Probab=29.48 E-value=97 Score=33.44 Aligned_cols=69 Identities=16% Similarity=0.139 Sum_probs=48.3
Q ss_pred cccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCC--CcceEEeccCHhHHHHHHHHHhhCC-eEEEE
Q 001837 523 ACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGN--ALNVVHSELLPEDKAKIINQFKQEG-KTAMI 592 (1007)
Q Consensus 523 ~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI--~~~~V~ar~sPeqK~~iV~~Lq~~G-~VamV 592 (1007)
..++.+...++.|++.||++++.-=|+...+..-.....- +...+...++|+=|. +++.|++.| .|+.|
T Consensus 26 ~~~~~~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~-~~~~l~~~~I~v~VV 97 (219)
T PTZ00445 26 NPHESADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKI-LGKRLKNSNIKISVV 97 (219)
T ss_pred CHHHHHHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHH-HHHHHHHCCCeEEEE
Confidence 3567788899999999999999877776665443332221 122566778998777 688888888 54444
No 273
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=29.28 E-value=4.4e+02 Score=29.16 Aligned_cols=77 Identities=13% Similarity=0.117 Sum_probs=51.9
Q ss_pred CcccccHHHHHHHHHHC---CCeEEEEcCCCHHHHHHHHHHhCCC---c--ceEEeccCHhHHHHHHHHHhhC-CeEEEE
Q 001837 522 DACRTGAAEAVNQLKSL---GIRTAMLTGDNQSAAMQAQEQLGNA---L--NVVHSELLPEDKAKIINQFKQE-GKTAMI 592 (1007)
Q Consensus 522 D~lR~~a~eaI~~Lr~a---GIkv~mlTGD~~~tA~~vA~~lGI~---~--~~V~ar~sPeqK~~iV~~Lq~~-G~VamV 592 (1007)
+-+-||..++|+..+.. |+.++-++-|++..|+++++. |-+ + .-|-.+.- -....+|+.+++. +.-.++
T Consensus 103 ~~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~l~~~-G~~~vmPlg~pIGsg~G-i~~~~~I~~I~e~~~vpVI~ 180 (248)
T cd04728 103 KTLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRLEDA-GCAAVMPLGSPIGSGQG-LLNPYNLRIIIERADVPVIV 180 (248)
T ss_pred cccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHc-CCCEeCCCCcCCCCCCC-CCCHHHHHHHHHhCCCcEEE
Confidence 44789999999999998 999997888999999998865 543 0 11112211 1125666666665 455677
Q ss_pred cCCccCHH
Q 001837 593 GDGINDAP 600 (1007)
Q Consensus 593 GDG~NDa~ 600 (1007)
+-|+.-..
T Consensus 181 egGI~tpe 188 (248)
T cd04728 181 DAGIGTPS 188 (248)
T ss_pred eCCCCCHH
Confidence 77776543
No 274
>COG1888 Uncharacterized protein conserved in archaea [Function unknown]
Probab=29.16 E-value=2.5e+02 Score=26.17 Aligned_cols=66 Identities=17% Similarity=0.188 Sum_probs=46.6
Q ss_pred ceeEEEEEecCCCCchHHHHHHHHHhCCCCeeEEEE-----ecCCCeEEEEEcCCcccHHHHHHHhhhccc
Q 001837 8 KYQKSYFDVLGICCSSEVPLIENILKSLEGVKEVSV-----IVPSRTVIVLHDALLISQHQIVKALNQARF 73 (1007)
Q Consensus 8 ~~~~~~l~V~Gm~C~~Ca~~IE~~L~~l~GV~~v~V-----n~~t~tv~V~~D~~~~s~~~I~~aL~~aGy 73 (1007)
...|+.+.+.-+.-..-.--+-..|.+++||+.|++ +..+..+.+......++.++|.+.+++.|-
T Consensus 4 ~iRRlVLDvlKP~~~p~ive~A~~lskl~gVegVNItv~eiD~et~~~~itIeG~~ldydei~~~iE~~Gg 74 (97)
T COG1888 4 GIRRLVLDVLKPHRGPTIVELALELSKLEGVEGVNITVTEIDVETENLKITIEGTNLDYDEIEEVIEELGG 74 (97)
T ss_pred cceeeeeeecCCcCCCcHHHHHHHHhhcCCcceEEEEEEEeeehhcceEEEEEcCCCCHHHHHHHHHHcCC
Confidence 446777777766633333356788899999998874 445666666665666789999999998754
No 275
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.
Probab=29.04 E-value=2.4e+02 Score=29.80 Aligned_cols=42 Identities=19% Similarity=0.196 Sum_probs=26.1
Q ss_pred cHHHHHHHHHHCCCeEEEEc------C-------CCHHHHHHHHHHhCCCcceEEec
Q 001837 527 GAAEAVNQLKSLGIRTAMLT------G-------DNQSAAMQAQEQLGNALNVVHSE 570 (1007)
Q Consensus 527 ~a~eaI~~Lr~aGIkv~mlT------G-------D~~~tA~~vA~~lGI~~~~V~ar 570 (1007)
|+.-++..+++.|.+|.-++ + .+...+..+|+.+||+ .+...
T Consensus 11 DS~~al~~a~~~G~~v~~l~~~~~~~~~~~~~h~~~~e~~~~~A~~lgip--l~~i~ 65 (194)
T cd01994 11 DSCYALYRALEEGHEVVALLNLTPEEGSSMMYHTVNHELLELQAEAMGIP--LIRIE 65 (194)
T ss_pred HHHHHHHHHHHcCCEEEEEEEEecCCCCcccccccCHHHHHHHHHHcCCc--EEEEe
Confidence 34445566666777655443 1 1567788888999988 44443
No 276
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=28.43 E-value=1.4e+03 Score=29.43 Aligned_cols=149 Identities=15% Similarity=0.124 Sum_probs=82.5
Q ss_pred EEEEeCCCcccccEEEEe-ce-eeeecccCCCCCeeeEe-cCCC----eeeeceEEeeeeEEEEEEEEecceEEe---hh
Q 001837 218 VLAVKAGEVIPIDGIVVD-GK-CEVDEKTLTGESYPVSK-QKGS----TVWAGTINLNGYISVETTAVAEDCVVA---KM 287 (1007)
Q Consensus 218 IV~L~~Ge~VPaDgiVl~-G~-~~VDES~LTGES~Pv~K-~~g~----~V~aGT~v~~G~~~~~V~~tG~~T~~g---ki 287 (1007)
.+.+...|.-|=|.+++. |+ .-+|--.+.|+|.-=+- -.|. ..-.|..|..|++..--.-+-.-|..+ .+
T Consensus 222 ~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~G~s~vDeS~iTGEs~PV~k~~Gd~V~aGtiN~~G~l~i~vt~~~~dt~l 301 (713)
T COG2217 222 EEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGSSSVDESMLTGESLPVEKKPGDEVFAGTVNLDGSLTIRVTRVGADTTL 301 (713)
T ss_pred EEEEEHHHCCCCCEEEECCCCEecCCeEEEeCcEEeecchhhCCCCCEecCCCCEEeeeEEECCccEEEEEEecCccCHH
Confidence 888999999999988885 54 66777777776654332 1122 235677777777653222222222222 33
Q ss_pred HHHHHHhhccchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHhcCCchhHHHHHHhhhhhhhccccchhhHHHHHHHHHH
Q 001837 288 AKLVEEAQNSKSRIQRFVDKFSQYYTPAVIFISACVAVIPIALGVSNHKQWFHLALVVLVSACPCALILSTPVVTYCALT 367 (1007)
Q Consensus 288 ~~lv~~a~~~ks~lq~~~~~i~~~~~~i~l~ia~l~~l~~~~~~~~~~~~~~~~al~vLv~a~P~aL~l~i~la~~~a~~ 367 (1007)
.+.++--+.-. .-...+.+++..+.-..+.+.++++++.+++...-....+..++...++..-.+-|-++-++.-.++.
T Consensus 302 a~Ii~LVe~Aq-~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~~~~~~~a~~~a~avLVIaCPCALgLAtP~ai~ 380 (713)
T COG2217 302 ARIIRLVEEAQ-SSKAPIQRLADRVASYFVPVVLVIAALTFALWPLFGGGDWETALYRALAVLVIACPCALGLATPTAIL 380 (713)
T ss_pred HHHHHHHHHHh-hCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhheeeeCccHHHhHHHHHHH
Confidence 34333322221 12234778888887777776666665555432111111244456666666666666666666666654
No 277
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=27.94 E-value=1.5e+02 Score=26.32 Aligned_cols=47 Identities=17% Similarity=0.245 Sum_probs=33.6
Q ss_pred EEEecCcccccHHHHHHHHHHCCCeEEE-EcCCCHHHHHHHHHHhCCC
Q 001837 517 IFCLSDACRTGAAEAVNQLKSLGIRTAM-LTGDNQSAAMQAQEQLGNA 563 (1007)
Q Consensus 517 li~l~D~lR~~a~eaI~~Lr~aGIkv~m-lTGD~~~tA~~vA~~lGI~ 563 (1007)
++.+.+..++.+.+..+.||+.|+++.+ ..+.+...-..-|.+.|+.
T Consensus 6 ii~~~~~~~~~a~~~~~~Lr~~g~~v~~d~~~~~~~~~~~~a~~~g~~ 53 (91)
T cd00860 6 VIPVTDEHLDYAKEVAKKLSDAGIRVEVDLRNEKLGKKIREAQLQKIP 53 (91)
T ss_pred EEeeCchHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHcCCC
Confidence 3455667888999999999999999877 4555555555556566654
No 278
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=27.84 E-value=1.6e+03 Score=30.14 Aligned_cols=77 Identities=9% Similarity=0.078 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCCcceEEecCCEEeeCCCcccCcEEEEeCCCcccccEEEEe-ce-eeeecccC
Q 001837 168 FLFTIAEWLESRASHKATAVMSSLMSIAPQKAIIAGTGEEVDAGEVKLNTVLAVKAGEVIPIDGIVVD-GK-CEVDEKTL 245 (1007)
Q Consensus 168 ~l~~i~~~le~~~~~k~~~~l~~L~~~~p~~~~V~rdg~~V~~~dLv~GDIV~L~~Ge~VPaDgiVl~-G~-~~VDES~L 245 (1007)
+++.+-.........+..+.-+.+..+.... .... .=++-|-...|...|.||-|.++++ |+ .-.|=-.+
T Consensus 86 iIl~vv~in~~i~~~QE~~aekal~aL~~l~----~~~~----~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi 157 (1053)
T TIGR01523 86 VISAIIALNILIGFIQEYKAEKTMDSLKNLA----SPMA----HVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLI 157 (1053)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHhccC----CCce----EEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEEEE
Confidence 3334444445555555555555555543211 1111 2234588899999999999999996 54 44555555
Q ss_pred CCCCeee
Q 001837 246 TGESYPV 252 (1007)
Q Consensus 246 TGES~Pv 252 (1007)
.+...-|
T Consensus 158 ~~~~L~V 164 (1053)
T TIGR01523 158 ETKNFDT 164 (1053)
T ss_pred EeCceEE
Confidence 5544433
No 279
>cd06167 LabA_like LabA_like proteins. A well conserved group of bacterial proteins with no defined function. LabA, a member from Synechococcus elongatus PCC 7942, has been shown to play a role in cyanobacterial circadian timing. It is required for negative feedback regulation of the autokinase/autophosphatase KaiC, a central component of the circadian clock system. In particular, LabA seems necessary for KaiC-dependent repression of gene expression.
Probab=27.37 E-value=1.7e+02 Score=28.95 Aligned_cols=29 Identities=14% Similarity=0.356 Sum_probs=16.2
Q ss_pred HHHHHHHHHhhCC-eEEEEcCCccCHHHHh
Q 001837 575 DKAKIINQFKQEG-KTAMIGDGINDAPALA 603 (1007)
Q Consensus 575 qK~~iV~~Lq~~G-~VamVGDG~NDa~ALk 603 (1007)
|=..+++.|++.| .|..+|-...-++.|+
T Consensus 111 Df~~~i~~lr~~G~~V~v~~~~~~~s~~L~ 140 (149)
T cd06167 111 DFVPLVERLRELGKRVIVVGFEAKTSRELR 140 (149)
T ss_pred cHHHHHHHHHHcCCEEEEEccCccChHHHH
Confidence 3445566666666 5666665544444444
No 280
>TIGR02765 crypto_DASH cryptochrome, DASH family. Photolyases and cryptochromes are related flavoproteins. Photolyases harness the energy of blue light to repair DNA damage by removing pyrimidine dimers. Cryptochromes do not repair DNA and are presumed to act instead in some other (possibly unknown) process such as entraining circadian rhythms. This model describes the cryptochrome DASH subfamily, one of at least five major subfamilies, which is found in plants, animals, marine bacteria, etc. Members of this family bind both folate and FAD. They may show weak photolyase activity in vitro but have not been shown to affect DNA repair in vivo. Rather, DASH family cryptochromes have been shown to bind RNA (Vibrio cholerae VC1814), or DNA, and seem likely to act in light-responsive regulatory processes.
Probab=27.27 E-value=1.7e+02 Score=34.68 Aligned_cols=71 Identities=15% Similarity=0.211 Sum_probs=50.1
Q ss_pred ccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEEeccC--HhHH---HHHHHHHhhCC-eE-EEEcCCccC
Q 001837 526 TGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSELL--PEDK---AKIINQFKQEG-KT-AMIGDGIND 598 (1007)
Q Consensus 526 ~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~ar~s--PeqK---~~iV~~Lq~~G-~V-amVGDG~ND 598 (1007)
....+.=++|++.|++.++..||....-..++++.++. .||+... |..+ ..+.+.|++.| .+ .+-++.+-+
T Consensus 61 esL~~L~~~L~~~g~~L~v~~G~~~~vl~~L~~~~~~~--~V~~~~~~~~~~~~rd~~v~~~l~~~~i~~~~~~~~~l~~ 138 (429)
T TIGR02765 61 ESLKDLRTSLRKLGSDLLVRSGKPEDVLPELIKELGVR--TVFLHQEVGSEEKSVERLLQQALARLGIHVEQHWGSTLYH 138 (429)
T ss_pred HHHHHHHHHHHHcCCCeEEEeCCHHHHHHHHHHHhCCC--EEEEeccCCHHHHHHHHHHHHHHHhcCceEEEecCCEeEC
Confidence 34556666788899999999999999999999999999 8888754 4443 23444466666 22 344444443
No 281
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=27.26 E-value=2.6e+02 Score=31.48 Aligned_cols=61 Identities=13% Similarity=0.310 Sum_probs=35.3
Q ss_pred EeccCHhHHHHHHHHHhhC--C-eEEEEcCC-ccCHH---HHhh--CCeeEEeCCCCcH--HHHhhcCEEEec
Q 001837 568 HSELLPEDKAKIINQFKQE--G-KTAMIGDG-INDAP---ALAT--ADIGISMGISGSA--LATETGQVILMS 629 (1007)
Q Consensus 568 ~ar~sPeqK~~iV~~Lq~~--G-~VamVGDG-~NDa~---ALk~--ADVGIAmg~~gs~--~A~~aADiVLl~ 629 (1007)
|.-+||..=.++++...-. | .|..+|.+ .-=-| .|.. |.|-+... ...+ .....||+++..
T Consensus 131 ~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs-~t~~L~~~~~~ADIvI~A 202 (279)
T PRK14178 131 FAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHS-KTENLKAELRQADILVSA 202 (279)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEec-ChhHHHHHHhhCCEEEEC
Confidence 4456676666666655432 6 79999998 33334 4433 55655553 2222 234678988854
No 282
>PRK13125 trpA tryptophan synthase subunit alpha; Provisional
Probab=26.18 E-value=5.9e+02 Score=27.80 Aligned_cols=85 Identities=18% Similarity=0.250 Sum_probs=48.2
Q ss_pred ccHHHHHHHHHHCCCeEEEEcCC--CHHHHHHHHHHhCCCcceE------EeccCHhHHHHHHHHHhhC--CeEEEEcCC
Q 001837 526 TGAAEAVNQLKSLGIRTAMLTGD--NQSAAMQAQEQLGNALNVV------HSELLPEDKAKIINQFKQE--GKTAMIGDG 595 (1007)
Q Consensus 526 ~~a~eaI~~Lr~aGIkv~mlTGD--~~~tA~~vA~~lGI~~~~V------~ar~sPeqK~~iV~~Lq~~--G~VamVGDG 595 (1007)
++..+.++.+++.|+++.++-.. +.+....+++...-. .+ +..-.+.+-...|+.+++. .....+|-|
T Consensus 116 ~~~~~~~~~~~~~Gl~~~~~v~p~T~~e~l~~~~~~~~~~--l~msv~~~~g~~~~~~~~~~i~~lr~~~~~~~i~v~gG 193 (244)
T PRK13125 116 DDLEKYVEIIKNKGLKPVFFTSPKFPDLLIHRLSKLSPLF--IYYGLRPATGVPLPVSVERNIKRVRNLVGNKYLVVGFG 193 (244)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHhCCCE--EEEEeCCCCCCCchHHHHHHHHHHHHhcCCCCEEEeCC
Confidence 57788999999999997665433 355666676665422 22 2222244444455555544 234678888
Q ss_pred c---cCHHHHhhCCe-eEEeC
Q 001837 596 I---NDAPALATADI-GISMG 612 (1007)
Q Consensus 596 ~---NDa~ALk~ADV-GIAmg 612 (1007)
+ +|+..+..+.+ |+-+|
T Consensus 194 I~~~e~i~~~~~~gaD~vvvG 214 (244)
T PRK13125 194 LDSPEDARDALSAGADGVVVG 214 (244)
T ss_pred cCCHHHHHHHHHcCCCEEEEC
Confidence 8 35555444433 34444
No 283
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=26.16 E-value=5.8e+02 Score=29.05 Aligned_cols=81 Identities=17% Similarity=0.186 Sum_probs=47.8
Q ss_pred ccHHHHHHHHHHCCCeEEEEcCCC--------------HHHHHHHHHHhCCCcceEEeccCHhHHHHHHHHHhhCC-eEE
Q 001837 526 TGAAEAVNQLKSLGIRTAMLTGDN--------------QSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEG-KTA 590 (1007)
Q Consensus 526 ~~a~eaI~~Lr~aGIkv~mlTGD~--------------~~tA~~vA~~lGI~~~~V~ar~sPeqK~~iV~~Lq~~G-~Va 590 (1007)
+....|...|++=+.-. +.|+-+ -..+.+|....|=. +.|+..-+|.---.+++..+-.. +++
T Consensus 168 ~KL~kA~~yLqnP~clf-latn~D~~~p~~~~~~ipG~G~~v~av~~~t~R~-P~v~GKP~~~m~~~l~~~~~i~psRt~ 245 (306)
T KOG2882|consen 168 PKLMKALNYLQNPGCLF-LATNRDATTPPTPGVEIPGAGSFVAAVKFATGRQ-PIVLGKPSTFMFEYLLEKFNIDPSRTC 245 (306)
T ss_pred HHHHHHHHHhCCCCcEE-EeccCccccCCCCCeeccCCccHHHHHHHHhcCC-CeecCCCCHHHHHHHHHHcCCCcceEE
Confidence 34555777777555433 223221 12334444444433 26777777777777777776665 899
Q ss_pred EEcCCcc-CHHHHhhCCee
Q 001837 591 MIGDGIN-DAPALATADIG 608 (1007)
Q Consensus 591 mVGDG~N-Da~ALk~ADVG 608 (1007)
||||-.| |...-+.++.+
T Consensus 246 mvGDRL~TDIlFG~~~G~~ 264 (306)
T KOG2882|consen 246 MVGDRLDTDILFGKNCGFK 264 (306)
T ss_pred EEcccchhhhhHhhccCcc
Confidence 9999976 55555555554
No 284
>PF02699 YajC: Preprotein translocase subunit; InterPro: IPR003849 Secretion across the inner membrane in some Gram-negative bacteria occurs via the preprotein translocase pathway. Proteins are produced in the cytoplasm as precursors, and require a chaperone subunit to direct them to the translocase component []. From there, the mature proteins are either targeted to the outer membrane, or remain as periplasmic proteins []. The translocase protein subunits are encoded on the bacterial chromosome. The translocase itself comprises 7 proteins, including a chaperone (SecB), ATPase (SecA), an integral membrane complex (SecY, SecE and SecG), and two additional membrane proteins that promote the release of the mature peptide into the periplasm (SecD and SecF) []. Other cytoplasmic/periplasmic proteins play a part in preprotein translocase activity, namely YidC and YajC []. The latter is bound in a complex to SecD and SecF, and plays a part in stabilising and regulating secretion through the SecYEG integral membrane component via SecA []. Homologues of the YajC gene have been found in a range of pathogenic and commensal microbes. Brucella abortis YajC- and SecD-like proteins were shown to stimulate a Th1 cell-mediated immune response in mice, and conferred protection when challenged with B.abortis []. Therefore, these proteins may have an antigenic role as well as a secretory one in virulent bacteria []. A number of previously uncharacterised "hypothetical" proteins also show similarity to E.coli YajC, suggesting that this family is wider than first thought []. More recently, the precise interactions between the E.coli SecYEG complex, SecD, SecF, YajC and YidC have been studied []. Rather than acting individually, the four proteins form a heterotetrameric complex and associate with the SecYEG heterotrimeric complex []. The SecF and YajC subunits link the complex to the integral membrane translocase. ; PDB: 2RDD_B.
Probab=25.80 E-value=1e+02 Score=28.08 Aligned_cols=13 Identities=15% Similarity=0.215 Sum_probs=0.0
Q ss_pred CcccCcEEEEeCC
Q 001837 212 EVKLNTVLAVKAG 224 (1007)
Q Consensus 212 dLv~GDIV~L~~G 224 (1007)
+|+|||-|....|
T Consensus 36 ~Lk~Gd~VvT~gG 48 (82)
T PF02699_consen 36 SLKPGDEVVTIGG 48 (82)
T ss_dssp -------------
T ss_pred cCCCCCEEEECCc
Confidence 4555555544443
No 285
>PF02680 DUF211: Uncharacterized ArCR, COG1888; InterPro: IPR003831 This entry describes proteins of unknown function.; PDB: 3BPD_I 2RAQ_F 2X3D_E.
Probab=25.73 E-value=2.4e+02 Score=26.59 Aligned_cols=66 Identities=23% Similarity=0.202 Sum_probs=48.5
Q ss_pred ceeEEEEEecCCCCchHHHHHHHHHhCCCCeeEEEE-----ecCCCeEEEEEcCCcccHHHHHHHhhhcccc
Q 001837 8 KYQKSYFDVLGICCSSEVPLIENILKSLEGVKEVSV-----IVPSRTVIVLHDALLISQHQIVKALNQARFE 74 (1007)
Q Consensus 8 ~~~~~~l~V~Gm~C~~Ca~~IE~~L~~l~GV~~v~V-----n~~t~tv~V~~D~~~~s~~~I~~aL~~aGy~ 74 (1007)
...|+.|.|.-++=++-. .+-..|..++||..+++ +..+..+.|...-..++.+++.+++++.|-.
T Consensus 3 ~irRlVLDVlKP~~p~i~-e~A~~l~~~~gV~gVnitv~EvD~ete~lkitiEG~~id~d~i~~~Ie~~Gg~ 73 (95)
T PF02680_consen 3 GIRRLVLDVLKPHEPSIV-ELAKALSELEGVDGVNITVVEVDVETENLKITIEGDDIDFDEIKEAIEELGGV 73 (95)
T ss_dssp SEEEEEEEEEEESSS-HH-HHHHHHHTSTTEEEEEEEEEEE-SSEEEEEEEEEESSE-HHHHHHHHHHTT-E
T ss_pred ceeEEEEEeecCCCCCHH-HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEeCCCCHHHHHHHHHHcCCe
Confidence 456788888877655555 57889999999999884 4566777777766678999999999997654
No 286
>COG4129 Predicted membrane protein [Function unknown]
Probab=25.54 E-value=1.8e+02 Score=33.63 Aligned_cols=55 Identities=16% Similarity=0.092 Sum_probs=30.7
Q ss_pred HHhhhhHHHHHHHhhhhchHHHHHHHHHHHHcCcccHHHHHHHHHHHHHhhhhHH
Q 001837 107 KYVYHPLRWFALGAVAIGIFPIILKGLAAIRNFKLDINILVLIAVIGTIAMNDYI 161 (1007)
Q Consensus 107 ~~~~~~l~~l~l~~~~~~~~p~~~~a~~~l~~~~l~i~~Li~ia~~~~~~~~~y~ 161 (1007)
.++..|-+.++.+.++++.-|-.++.++...++.+..-+=..++++...+++...
T Consensus 28 ~~l~~~~~~~A~i~AV~~l~~t~~~s~~~~~~r~~g~~iG~~~a~l~~~l~g~~~ 82 (332)
T COG4129 28 HLLGLPQPAFAGISAVLCLSPTIKRSLKRALQRLLGNALGAILAVLFFLLFGQNP 82 (332)
T ss_pred HHhCCCchHHHHHHHhhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHcCccH
Confidence 3333444445555666777777776666665555555444555555555555433
No 287
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=25.53 E-value=1.4e+02 Score=33.71 Aligned_cols=43 Identities=26% Similarity=0.461 Sum_probs=28.9
Q ss_pred cCcccccHHHHHHHHHHCCCeE---EEEcCCCHHHHHH------HHHHhCCC
Q 001837 521 SDACRTGAAEAVNQLKSLGIRT---AMLTGDNQSAAMQ------AQEQLGNA 563 (1007)
Q Consensus 521 ~D~lR~~a~eaI~~Lr~aGIkv---~mlTGD~~~tA~~------vA~~lGI~ 563 (1007)
.+.++.+.++.++.|++.|+++ +++-||++..... .|+++||.
T Consensus 12 a~~i~~~~~~~v~~l~~~g~~p~Laii~vg~~~as~~Yv~~k~k~a~~~Gi~ 63 (286)
T PRK14175 12 AKDYRQGLQDQVEALKEKGFTPKLSVILVGNDGASQSYVRSKKKAAEKIGMI 63 (286)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCE
Confidence 4556777888888887777764 4556777766543 46667764
No 288
>PRK09479 glpX fructose 1,6-bisphosphatase II; Reviewed
Probab=25.36 E-value=1.2e+02 Score=34.37 Aligned_cols=82 Identities=18% Similarity=0.341 Sum_probs=55.3
Q ss_pred ecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHH-HhCCCcc---------------------eEEeccCHhHHH
Q 001837 520 LSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQE-QLGNALN---------------------VVHSELLPEDKA 577 (1007)
Q Consensus 520 l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~-~lGI~~~---------------------~V~ar~sPeqK~ 577 (1007)
+-|.+| =.+.|+++|+.|.+|.+++.-+...+...+. ..|++.- .+.+|+-|....
T Consensus 163 vLdRpR--H~~lI~eiR~~Gari~Li~DGDVa~ai~~~~~~s~vD~~~GiGGaPEGVlaAaAlkclGG~mqgRL~~~~~~ 240 (319)
T PRK09479 163 VLDRPR--HEELIAEIREAGARVKLISDGDVAGAIATAFPDTGVDILMGIGGAPEGVLAAAALKCLGGEMQGRLLPRNEE 240 (319)
T ss_pred EEcCch--HHHHHHHHHHcCCeEEEeccccHHHHHHHhcCCCCeeEEEEcCcChHHHHHHHHHHhcCceeEEeECCCCHH
Confidence 445444 5789999999999999999777777777662 2344321 677888765544
Q ss_pred HHHHHHhh---------------CC-eEEEEcCCccCHHHHh
Q 001837 578 KIINQFKQ---------------EG-KTAMIGDGINDAPALA 603 (1007)
Q Consensus 578 ~iV~~Lq~---------------~G-~VamVGDG~NDa~ALk 603 (1007)
+.-+..+. .| .|.|+.-|+.|...|+
T Consensus 241 e~~r~~~~Gi~D~~kv~~~~dLv~gddv~F~ATGVTdG~lL~ 282 (319)
T PRK09479 241 ERARAKKMGITDLDKVLTLDDLVRGDDVIFAATGVTDGDLLK 282 (319)
T ss_pred HHHHHHHcCCcChhheeEHHHcccCCCEEEEEeCCCCCCCcC
Confidence 44333331 13 5888888999887776
No 289
>COG3981 Predicted acetyltransferase [General function prediction only]
Probab=25.36 E-value=2.1e+02 Score=29.83 Aligned_cols=60 Identities=20% Similarity=0.180 Sum_probs=42.0
Q ss_pred eEEEEEECCEEEEEEEecCccccc-------------------------HHHHHHHHHHCCCeEEEEcC--CCHHHHHHH
Q 001837 504 TIGYIFSGASPVGIFCLSDACRTG-------------------------AAEAVNQLKSLGIRTAMLTG--DNQSAAMQA 556 (1007)
Q Consensus 504 ~~i~v~~d~~~lGli~l~D~lR~~-------------------------a~eaI~~Lr~aGIkv~mlTG--D~~~tA~~v 556 (1007)
+...+..|++++|+|.++-.+-+. .+-++++.|..||+-+|||= ||......|
T Consensus 70 ~y~~v~~d~~ivG~i~lRh~Ln~~ll~~gGHIGY~VrPseR~KGYA~emLkl~L~~ar~lgi~~Vlvtcd~dN~ASrkvI 149 (174)
T COG3981 70 TYWAVDEDGQIVGFINLRHQLNDFLLEEGGHIGYSVRPSERRKGYAKEMLKLALEKARELGIKKVLVTCDKDNIASRKVI 149 (174)
T ss_pred eEEEEecCCcEEEEEEeeeecchHHHhcCCcccceeChhhhccCHHHHHHHHHHHHHHHcCCCeEEEEeCCCCchhhHHH
Confidence 344455688999999987654332 55678899999999999985 455555555
Q ss_pred HHHhCCC
Q 001837 557 QEQLGNA 563 (1007)
Q Consensus 557 A~~lGI~ 563 (1007)
-..-|+.
T Consensus 150 ~~NGGil 156 (174)
T COG3981 150 EANGGIL 156 (174)
T ss_pred HhcCCEE
Confidence 5555554
No 290
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=24.94 E-value=1.5e+02 Score=33.68 Aligned_cols=43 Identities=19% Similarity=0.396 Sum_probs=29.1
Q ss_pred cCcccccHHHHHHHHHHCCCeE---EEEcCCCHHHHH------HHHHHhCCC
Q 001837 521 SDACRTGAAEAVNQLKSLGIRT---AMLTGDNQSAAM------QAQEQLGNA 563 (1007)
Q Consensus 521 ~D~lR~~a~eaI~~Lr~aGIkv---~mlTGD~~~tA~------~vA~~lGI~ 563 (1007)
...+|.+.++.++.|++.|+++ +++-||++.... ..|+++||.
T Consensus 11 A~~i~~~l~~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~ 62 (297)
T PRK14167 11 AAQIRDDLTDAIETLEDAGVTPGLATVLMSDDPASETYVSMKQRDCEEVGIE 62 (297)
T ss_pred HHHHHHHHHHHHHHHHhCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCE
Confidence 3456777888888888777753 556687776654 346667764
No 291
>COG1171 IlvA Threonine dehydratase [Amino acid transport and metabolism]
Probab=24.31 E-value=1.2e+02 Score=35.01 Aligned_cols=56 Identities=27% Similarity=0.364 Sum_probs=47.0
Q ss_pred cCCCHHHHHHHHHHhCCCcceEEeccCHhHHHHHHHHHhhCC-eEEEEcCCccCHHHHhh
Q 001837 546 TGDNQSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEG-KTAMIGDGINDAPALAT 604 (1007)
Q Consensus 546 TGD~~~tA~~vA~~lGI~~~~V~ar~sPeqK~~iV~~Lq~~G-~VamVGDG~NDa~ALk~ 604 (1007)
+|.+-.-....|+.+||....|.-..+|.+|..-++. .| .|...||..+|+.+...
T Consensus 82 aGNHaQGvA~aa~~lGi~a~IvMP~~tp~~Kv~a~r~---~GaeVil~g~~~dda~~~a~ 138 (347)
T COG1171 82 AGNHAQGVAYAAKRLGIKATIVMPETTPKIKVDATRG---YGAEVILHGDNFDDAYAAAE 138 (347)
T ss_pred CCcHHHHHHHHHHHhCCCEEEEecCCCcHHHHHHHHh---cCCEEEEECCCHHHHHHHHH
Confidence 4777788888899999998888899999999988874 46 89999999999876554
No 292
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=24.14 E-value=6.3e+02 Score=31.26 Aligned_cols=70 Identities=21% Similarity=0.277 Sum_probs=56.6
Q ss_pred cHHHHHHHHHHCCCeEEEEcCCC-HHHHHHHHHHhCCCcceEEeccCHhHHHHHHHHHhhCCeEEEEcCCcc
Q 001837 527 GAAEAVNQLKSLGIRTAMLTGDN-QSAAMQAQEQLGNALNVVHSELLPEDKAKIINQFKQEGKTAMIGDGIN 597 (1007)
Q Consensus 527 ~a~eaI~~Lr~aGIkv~mlTGD~-~~tA~~vA~~lGI~~~~V~ar~sPeqK~~iV~~Lq~~G~VamVGDG~N 597 (1007)
|+-.+|+.+++.+-++.+++=.+ ...+..++.-+++.. .++.-.++++=...|+.|++.|.-++|||++-
T Consensus 95 Dil~al~~a~~~~~~iavv~~~~~~~~~~~~~~~l~~~i-~~~~~~~~~e~~~~v~~lk~~G~~~vvG~~~~ 165 (538)
T PRK15424 95 DVMQALARARKLTSSIGVVTYQETIPALVAFQKTFNLRI-EQRSYVTEEDARGQINELKANGIEAVVGAGLI 165 (538)
T ss_pred HHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCce-EEEEecCHHHHHHHHHHHHHCCCCEEEcCchH
Confidence 57788888888888888887655 445667888888863 34667789999999999999998888899876
No 293
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=24.13 E-value=1.3e+02 Score=32.38 Aligned_cols=59 Identities=19% Similarity=0.198 Sum_probs=30.4
Q ss_pred ccCHhHHHHHHHHHhhC-C-------eEEEEcCCccCHHHHhhC------CeeEEeCCCCcHHHHhhcCEEEe
Q 001837 570 ELLPEDKAKIINQFKQE-G-------KTAMIGDGINDAPALATA------DIGISMGISGSALATETGQVILM 628 (1007)
Q Consensus 570 r~sPeqK~~iV~~Lq~~-G-------~VamVGDG~NDa~ALk~A------DVGIAmg~~gs~~A~~aADiVLl 628 (1007)
|..-..|...|+.|-+. + .++++||...|-.|++.. +++|.++......-...|++-|.
T Consensus 160 rp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~ 232 (235)
T PF02358_consen 160 RPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLD 232 (235)
T ss_dssp E-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES----------------
T ss_pred EeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeecccccccccccccc
Confidence 33333499999987765 3 489999999999998873 67888873221222345555553
No 294
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=24.13 E-value=4e+02 Score=35.28 Aligned_cols=73 Identities=15% Similarity=0.150 Sum_probs=39.6
Q ss_pred ccCcEEEEeCCCcccccEEEEe-ce-eeeecccCCCCCeeeEecC--CC--ee--eeceE--EeeeeEEEEEEEEecceE
Q 001837 214 KLNTVLAVKAGEVIPIDGIVVD-GK-CEVDEKTLTGESYPVSKQK--GS--TV--WAGTI--NLNGYISVETTAVAEDCV 283 (1007)
Q Consensus 214 v~GDIV~L~~Ge~VPaDgiVl~-G~-~~VDES~LTGES~Pv~K~~--g~--~V--~aGT~--v~~G~~~~~V~~tG~~T~ 283 (1007)
+-|-...+...|.+|-|.++++ |+ .-+|=-.+.|+..-|.-.. |. .+ ..|.. +..|+....-...+--+.
T Consensus 172 RdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~ 251 (941)
T TIGR01517 172 RGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTA 251 (941)
T ss_pred ECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEE
Confidence 3466777778888888877775 44 5555555555333332211 21 11 23443 666666555555555555
Q ss_pred Eeh
Q 001837 284 VAK 286 (1007)
Q Consensus 284 ~gk 286 (1007)
.|.
T Consensus 252 tG~ 254 (941)
T TIGR01517 252 VGV 254 (941)
T ss_pred eCC
Confidence 554
No 295
>cd06279 PBP1_LacI_like_3 Ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. This group includes the ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.
Probab=23.98 E-value=3.4e+02 Score=29.58 Aligned_cols=70 Identities=10% Similarity=0.144 Sum_probs=42.2
Q ss_pred CcccccHHHHH-HHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEEe-ccCHhHHHHHHHHHhhCC-eEEEEcCC
Q 001837 522 DACRTGAAEAV-NQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHS-ELLPEDKAKIINQFKQEG-KTAMIGDG 595 (1007)
Q Consensus 522 D~lR~~a~eaI-~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~a-r~sPeqK~~iV~~Lq~~G-~VamVGDG 595 (1007)
|+.-....+.+ +.+++.|+.+.+.+.++...........+.+ -+.. ...+.+ ..++.+++.| .|.+++..
T Consensus 16 ~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~d--giii~~~~~~~--~~~~~~~~~~ipvV~~~~~ 88 (283)
T cd06279 16 DPVASQFLAGVAEVLDAAGVNLLLLPASSEDSDSALVVSALVD--GFIVYGVPRDD--PLVAALLRRGLPVVVVDQP 88 (283)
T ss_pred CccHHHHHHHHHHHHHHCCCEEEEecCccHHHHHHHHHhcCCC--EEEEeCCCCCh--HHHHHHHHcCCCEEEEecC
Confidence 44444444444 4577899999888887755555555555655 3332 222222 4578888888 77777654
No 296
>cd01573 modD_like ModD; Quinolinate phosphoribosyl transferase (QAPRTase or QPRTase) present in some modABC operons in bacteria, which are involved in molybdate transport. In general, QPRTases are part of the de novo synthesis pathway of NAD in both prokaryotes and eukaryotes. They catalyse the reaction of quinolinic acid (QA) with 5-phosphoribosyl-1-pyrophosphate (PRPP) in the presence of Mg2+ to produce nicotinic acid mononucleotide (NAMN), pyrophosphate and carbon dioxide.
Probab=23.84 E-value=5.5e+02 Score=28.72 Aligned_cols=80 Identities=21% Similarity=0.331 Sum_probs=56.8
Q ss_pred HHHHHHHHHC-CCeEEEEcCCCHHHHHHHHHHhCCCcceE-EeccCHhHHHHHHHHHhhC--C-eEEEEcCCc--cCHHH
Q 001837 529 AEAVNQLKSL-GIRTAMLTGDNQSAAMQAQEQLGNALNVV-HSELLPEDKAKIINQFKQE--G-KTAMIGDGI--NDAPA 601 (1007)
Q Consensus 529 ~eaI~~Lr~a-GIkv~mlTGD~~~tA~~vA~~lGI~~~~V-~ar~sPeqK~~iV~~Lq~~--G-~VamVGDG~--NDa~A 601 (1007)
.++++.+|+. +-+.+-++-++.+-+...+ +.|.+ .+ +.++.|++=.++++.+++. . .+..+| |+ ++++.
T Consensus 171 ~~av~~~R~~~~~~~IgVev~t~eea~~A~-~~gaD--~I~ld~~~p~~l~~~~~~~~~~~~~i~i~AsG-GI~~~ni~~ 246 (272)
T cd01573 171 LKALARLRATAPEKKIVVEVDSLEEALAAA-EAGAD--ILQLDKFSPEELAELVPKLRSLAPPVLLAAAG-GINIENAAA 246 (272)
T ss_pred HHHHHHHHHhCCCCeEEEEcCCHHHHHHHH-HcCCC--EEEECCCCHHHHHHHHHHHhccCCCceEEEEC-CCCHHHHHH
Confidence 5677888764 3345678888888777654 67766 44 5688999988888888765 3 577777 66 45677
Q ss_pred HhhCCe-eEEeC
Q 001837 602 LATADI-GISMG 612 (1007)
Q Consensus 602 Lk~ADV-GIAmg 612 (1007)
+.++++ +|++|
T Consensus 247 ~~~~Gvd~I~vs 258 (272)
T cd01573 247 YAAAGADILVTS 258 (272)
T ss_pred HHHcCCcEEEEC
Confidence 788776 56664
No 297
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]
Probab=23.65 E-value=3.1e+02 Score=31.26 Aligned_cols=67 Identities=24% Similarity=0.366 Sum_probs=43.7
Q ss_pred cHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCCcceEEeccC----HhHHHH----HHHHHhh-CC-eEEEEcCCc
Q 001837 527 GAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNALNVVHSELL----PEDKAK----IINQFKQ-EG-KTAMIGDGI 596 (1007)
Q Consensus 527 ~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~~~~V~ar~s----PeqK~~----iV~~Lq~-~G-~VamVGDG~ 596 (1007)
.++++-+-|-+. +..+|+=+....+....|+..+++ + +-.++ |-|-+. |.+.+.. .| ++++||||-
T Consensus 88 si~DTArVLsr~-~D~I~~R~~~~~~ve~lA~~s~VP--V-iNgLtD~~HP~Q~LADl~Ti~E~~g~l~g~k~a~vGDgN 163 (310)
T COG0078 88 SIKDTARVLSRM-VDAIMIRGFSHETLEELAKYSGVP--V-INGLTDEFHPCQALADLMTIKEHFGSLKGLKLAYVGDGN 163 (310)
T ss_pred cHHHHHHHHHhh-hheEEEecccHHHHHHHHHhCCCc--e-EcccccccCcHHHHHHHHHHHHhcCcccCcEEEEEcCcc
Confidence 344444444444 678899999999999999999998 4 43333 433332 3333322 25 799999994
Q ss_pred c
Q 001837 597 N 597 (1007)
Q Consensus 597 N 597 (1007)
|
T Consensus 164 N 164 (310)
T COG0078 164 N 164 (310)
T ss_pred h
Confidence 4
No 298
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=23.43 E-value=2.8e+02 Score=27.54 Aligned_cols=60 Identities=10% Similarity=0.067 Sum_probs=42.3
Q ss_pred CCEEEEEEEecCcccccHHHHHHHHHHCCC-eE-EEEcCCCH------HHHHHHHHHhCCCcceEEeccC
Q 001837 511 GASPVGIFCLSDACRTGAAEAVNQLKSLGI-RT-AMLTGDNQ------SAAMQAQEQLGNALNVVHSELL 572 (1007)
Q Consensus 511 d~~~lGli~l~D~lR~~a~eaI~~Lr~aGI-kv-~mlTGD~~------~tA~~vA~~lGI~~~~V~ar~s 572 (1007)
+-.++|+-++.-.--+..+++++.|+++|+ .+ +|+-|--. .....-.+++|++ .+|..=+
T Consensus 50 ~adiVglS~L~t~~~~~~~~~~~~l~~~gl~~v~vivGG~~~i~~~d~~~~~~~L~~~Gv~--~vf~pgt 117 (128)
T cd02072 50 DADAILVSSLYGHGEIDCKGLREKCDEAGLKDILLYVGGNLVVGKQDFEDVEKRFKEMGFD--RVFAPGT 117 (128)
T ss_pred CCCEEEEeccccCCHHHHHHHHHHHHHCCCCCCeEEEECCCCCChhhhHHHHHHHHHcCCC--EEECcCC
Confidence 446788888888888899999999999998 44 45555421 2234557778887 7776544
No 299
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=22.83 E-value=2e+02 Score=32.47 Aligned_cols=67 Identities=22% Similarity=0.255 Sum_probs=49.0
Q ss_pred ecCcccccHHHHHHHHHHC-CCeE---EEEcCCCHHHHHH------HHHHhCCCcceEEe--ccCHhHHHHHHHHHhhC
Q 001837 520 LSDACRTGAAEAVNQLKSL-GIRT---AMLTGDNQSAAMQ------AQEQLGNALNVVHS--ELLPEDKAKIINQFKQE 586 (1007)
Q Consensus 520 l~D~lR~~a~eaI~~Lr~a-GIkv---~mlTGD~~~tA~~------vA~~lGI~~~~V~a--r~sPeqK~~iV~~Lq~~ 586 (1007)
+.+.++.++++.|+.+++. |+++ +++-||++..... .++++||....+.- .+++++=...|+.|.+.
T Consensus 11 ~a~~i~~~~~~~i~~~~~~~~~~p~L~~i~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~~l~~~i~~Ln~d 89 (283)
T PRK14192 11 LAKQIEEELSVRVEALKAKTGRTPILATILVGDDPASATYVRMKGNACRRVGMDSLKVELPQETTTEQLLAKIEELNAN 89 (283)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 3457889999999999877 7764 6678999887764 57899998333322 45677767788888765
No 300
>PRK05265 pyridoxine 5'-phosphate synthase; Provisional
Probab=22.79 E-value=2.5e+02 Score=30.91 Aligned_cols=38 Identities=24% Similarity=0.424 Sum_probs=33.2
Q ss_pred cccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCC
Q 001837 525 RTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNA 563 (1007)
Q Consensus 525 R~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~ 563 (1007)
....++.|++|+++||+|-+.= |........|+++|-+
T Consensus 112 ~~~l~~~i~~L~~~gIrVSLFi-dP~~~qi~~A~~~GAd 149 (239)
T PRK05265 112 FDKLKPAIARLKDAGIRVSLFI-DPDPEQIEAAAEVGAD 149 (239)
T ss_pred HHHHHHHHHHHHHCCCEEEEEe-CCCHHHHHHHHHhCcC
Confidence 3668899999999999987666 8888899999999987
No 301
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=22.78 E-value=42 Score=34.32 Aligned_cols=13 Identities=38% Similarity=0.677 Sum_probs=12.2
Q ss_pred EEecCccccccCc
Q 001837 391 MAFDKTGTITRGE 403 (1007)
Q Consensus 391 I~fDKTGTLT~g~ 403 (1007)
++||.+||||.+.
T Consensus 1 v~fD~DGTL~~~~ 13 (192)
T PF12710_consen 1 VIFDFDGTLTDSD 13 (192)
T ss_dssp EEEESBTTTBSSH
T ss_pred eEEecCcCeecCC
Confidence 6899999999988
No 302
>cd01516 FBPase_glpX Bacterial fructose-1,6-bisphosphatase, glpX-encoded. A dimeric enzyme dependent on Mg(2+). glpX-encoded FPBase (FBPase class II) differs from other members of the inositol-phosphatase superfamily by permutation of secondary structure elements. The core structure around the active site is well preserved. In E. coli, FBPase II is part of the glp regulon, which mediates growth on glycerol or sn-glycerol 3-phosphate as the sole carbon source.
Probab=22.75 E-value=1.6e+02 Score=33.44 Aligned_cols=79 Identities=19% Similarity=0.338 Sum_probs=52.3
Q ss_pred cccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-hCCCcc---------------------eEEeccCHhHHHHHHHH
Q 001837 525 RTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQ-LGNALN---------------------VVHSELLPEDKAKIINQ 582 (1007)
Q Consensus 525 R~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~-lGI~~~---------------------~V~ar~sPeqK~~iV~~ 582 (1007)
||.=.+.|+++|+.|.||.+++.-+...|...+.. .|++.- .+.+|+-|....+.-+.
T Consensus 163 RpRH~~lI~eiR~~Gari~Li~DGDV~~ai~~~~~~s~vD~~~GiGGaPEGVlaAaAlkclGG~~qgrL~~~~~~e~~r~ 242 (309)
T cd01516 163 RPRHAALIEEIREAGARIKLIPDGDVAAAIATALPGSGVDVLMGIGGAPEGVLAAAALKCLGGEMQGRLLPRNEEERARA 242 (309)
T ss_pred CchHHHHHHHHHHcCCeEEEeccccHHHHHHHhCCCCCeeEEEECCCChHHHHHHHHHHhCCceeEEEECCCCHHHHHHH
Confidence 44457899999999999999997666666666532 344311 57788776554443333
Q ss_pred Hh---------------hCC-eEEEEcCCccCHHHHh
Q 001837 583 FK---------------QEG-KTAMIGDGINDAPALA 603 (1007)
Q Consensus 583 Lq---------------~~G-~VamVGDG~NDa~ALk 603 (1007)
.+ -.| .|.|+.-|+.|...|+
T Consensus 243 ~~~Gi~D~~ki~~~ddLv~gd~v~FaATGvTdG~lL~ 279 (309)
T cd01516 243 REMGITDPNKILTLDDLVRGDDVVFAATGITDGELLK 279 (309)
T ss_pred HHcCCCChhheeEHHHcccCCCEEEEEeCCCCCCccC
Confidence 22 013 5888888888877776
No 303
>PRK00208 thiG thiazole synthase; Reviewed
Probab=22.63 E-value=7.3e+02 Score=27.54 Aligned_cols=74 Identities=18% Similarity=0.165 Sum_probs=49.7
Q ss_pred CcccccHHHHHHHHHHC---CCeEEEEcCCCHHHHHHHHHHhCCCcceE-------EeccCHhHHHHHHHHHhhC-CeEE
Q 001837 522 DACRTGAAEAVNQLKSL---GIRTAMLTGDNQSAAMQAQEQLGNALNVV-------HSELLPEDKAKIINQFKQE-GKTA 590 (1007)
Q Consensus 522 D~lR~~a~eaI~~Lr~a---GIkv~mlTGD~~~tA~~vA~~lGI~~~~V-------~ar~sPeqK~~iV~~Lq~~-G~Va 590 (1007)
+-+-|+..++|+..+.. |+.++-++-|++..|+++++. |-+ .| -.+... ....+++.+++. +.-+
T Consensus 103 ~~llpd~~~tv~aa~~L~~~Gf~vlpyc~~d~~~ak~l~~~-G~~--~vmPlg~pIGsg~gi-~~~~~i~~i~e~~~vpV 178 (250)
T PRK00208 103 KTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKRLEEA-GCA--AVMPLGAPIGSGLGL-LNPYNLRIIIEQADVPV 178 (250)
T ss_pred CCCCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHc-CCC--EeCCCCcCCCCCCCC-CCHHHHHHHHHhcCCeE
Confidence 34689999999999998 999997777888999988865 543 22 112111 124446666664 4556
Q ss_pred EEcCCccCH
Q 001837 591 MIGDGINDA 599 (1007)
Q Consensus 591 mVGDG~NDa 599 (1007)
+++-|+.-.
T Consensus 179 IveaGI~tp 187 (250)
T PRK00208 179 IVDAGIGTP 187 (250)
T ss_pred EEeCCCCCH
Confidence 677676543
No 304
>COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis]
Probab=22.59 E-value=2e+02 Score=27.30 Aligned_cols=28 Identities=21% Similarity=0.344 Sum_probs=22.3
Q ss_pred EEecCC-EEeeCCCcccCcEEEEeCCCcc
Q 001837 200 IIAGTG-EEVDAGEVKLNTVLAVKAGEVI 227 (1007)
Q Consensus 200 ~V~rdg-~~V~~~dLv~GDIV~L~~Ge~V 227 (1007)
.|.-+| ..-|+.++++||+|.|.-|..+
T Consensus 35 rV~vNG~~aKpS~~VK~GD~l~i~~~~~~ 63 (100)
T COG1188 35 RVKVNGQRAKPSKEVKVGDILTIRFGNKE 63 (100)
T ss_pred eEEECCEEcccccccCCCCEEEEEeCCcE
Confidence 455566 5678999999999999988763
No 305
>TIGR00739 yajC preprotein translocase, YajC subunit. While this protein is part of the preprotein translocase in Escherichia coli, it is not essential for viability or protein secretion. The N-terminus region contains a predicted membrane-spanning region followed by a region consisting almost entirely of residues with charged (acidic, basic, or zwitterionic) side chains. This small protein is about 100 residues in length, and is restricted to bacteria; however, this protein is absent from some lineages, including spirochetes and Mycoplasmas.
Probab=22.52 E-value=3.4e+02 Score=24.82 Aligned_cols=23 Identities=17% Similarity=0.264 Sum_probs=9.7
Q ss_pred HHHHHHHHhh-ccCCcceEEecCC
Q 001837 183 KATAVMSSLM-SIAPQKAIIAGTG 205 (1007)
Q Consensus 183 k~~~~l~~L~-~~~p~~~~V~rdg 205 (1007)
|.++..+++. ++.|..-.+...|
T Consensus 26 K~~k~~~~m~~~L~~Gd~VvT~gG 49 (84)
T TIGR00739 26 KRRKAHKKLIESLKKGDKVLTIGG 49 (84)
T ss_pred HHHHHHHHHHHhCCCCCEEEECCC
Confidence 3333333333 3444444444444
No 306
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=22.51 E-value=1.5e+02 Score=28.26 Aligned_cols=38 Identities=18% Similarity=0.251 Sum_probs=29.7
Q ss_pred ccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCC
Q 001837 524 CRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQLGNA 563 (1007)
Q Consensus 524 lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~lGI~ 563 (1007)
--+++.++++.+++.|++++.+|++.+ -...+.+.|+.
T Consensus 55 ~t~e~i~~~~~a~~~g~~iI~IT~~~~--l~~~~~~~~~~ 92 (119)
T cd05017 55 NTEETLSAVEQAKERGAKIVAITSGGK--LLEMAREHGVP 92 (119)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHcCCc
Confidence 346889999999999999999999875 33456655654
No 307
>PF06738 DUF1212: Protein of unknown function (DUF1212); InterPro: IPR010619 This entry represents a predicted domain found within a number of hypothetical proteins of unknown function found in eukaryotes, bacteria and archaea. Some of these sequences are predicted to be membrane proteins.
Probab=22.46 E-value=4.8e+02 Score=27.07 Aligned_cols=34 Identities=18% Similarity=0.423 Sum_probs=22.4
Q ss_pred CchHHHHHHHHHhCCC---CeeEEEEecCCCeEEEEE
Q 001837 21 CSSEVPLIENILKSLE---GVKEVSVIVPSRTVIVLH 54 (1007)
Q Consensus 21 C~~Ca~~IE~~L~~l~---GV~~v~Vn~~t~tv~V~~ 54 (1007)
+..-..++|+.+.++. |++++++...-..+.+.+
T Consensus 8 ~Ga~~~rve~~~~ria~~~G~~~~~~~v~~t~i~is~ 44 (193)
T PF06738_consen 8 SGAETYRVEDTMQRIARALGLEDVEVFVTPTGIFISF 44 (193)
T ss_pred hCCcHHHHHHHHHHHHHHcCCCeeEEEEecCEEEEEE
Confidence 3444455555554433 888888888888887777
No 308
>PRK09459 pspG phage shock protein G; Reviewed
Probab=22.31 E-value=3.1e+02 Score=24.67 Aligned_cols=36 Identities=6% Similarity=0.069 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcccccCCCCcccccC
Q 001837 675 WAAVLADVGTCLIVILNSMLLLHETHTHRGKCIKSS 710 (1007)
Q Consensus 675 ~~ail~~~~s~l~vvlNSlrll~~~~~~~~~~~r~~ 710 (1007)
..++.+-+++-+++++-..|+.|...+++..+||..
T Consensus 40 m~~lviKLLPWLil~~v~vW~~r~~~~~~~~~y~~~ 75 (76)
T PRK09459 40 MFALMIKLLPWLLLAVVVVWVIRAIKAPKVPRYQRY 75 (76)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccC
Confidence 345556677888888889999998777777777653
No 309
>cd04724 Tryptophan_synthase_alpha Ttryptophan synthase (TRPS) alpha subunit (TSA). TPRS is a bifunctional tetrameric enzyme (2 alpha and 2 beta subunits) that catalyzes the last two steps of L-tryptophan biosynthesis. Alpha and beta subunit catalyze two distinct reactions which are both strongly stimulated by the formation of the complex. The alpha subunit catalyzes the cleavage of indole 3-glycerol phosphate (IGP) to indole and d-glyceraldehyde 3-phosphate (G3P). Indole is then channeled to the active site of the beta subunit, a PLP-dependent enzyme that catalyzes a replacement reaction to convert L-serine into L-tryptophan.
Probab=22.18 E-value=5.4e+02 Score=28.10 Aligned_cols=76 Identities=18% Similarity=0.207 Sum_probs=46.8
Q ss_pred CcccccHHHHHHHHHHCCCeEEE-EcCC-CHHHHHHHHH-HhCCCcceEEe------ccC--HhHHHHHHHHHhhCC-eE
Q 001837 522 DACRTGAAEAVNQLKSLGIRTAM-LTGD-NQSAAMQAQE-QLGNALNVVHS------ELL--PEDKAKIINQFKQEG-KT 589 (1007)
Q Consensus 522 D~lR~~a~eaI~~Lr~aGIkv~m-lTGD-~~~tA~~vA~-~lGI~~~~V~a------r~s--PeqK~~iV~~Lq~~G-~V 589 (1007)
|-+-++..+.++.+++.|++.++ ++-. .......+++ ..|+. .+.+ ..+ +..-...|+.+++.. .-
T Consensus 112 Dl~~ee~~~~~~~~~~~g~~~i~~i~P~T~~~~i~~i~~~~~~~v--y~~s~~g~tG~~~~~~~~~~~~i~~lr~~~~~p 189 (242)
T cd04724 112 DLPPEEAEEFREAAKEYGLDLIFLVAPTTPDERIKKIAELASGFI--YYVSRTGVTGARTELPDDLKELIKRIRKYTDLP 189 (242)
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHhhCCCCE--EEEeCCCCCCCccCCChhHHHHHHHHHhcCCCc
Confidence 43345788899999999998665 4433 3455566666 55654 2222 111 344456667777653 56
Q ss_pred EEEcCCccCH
Q 001837 590 AMIGDGINDA 599 (1007)
Q Consensus 590 amVGDG~NDa 599 (1007)
.++|-|+|+.
T Consensus 190 I~vggGI~~~ 199 (242)
T cd04724 190 IAVGFGISTP 199 (242)
T ss_pred EEEEccCCCH
Confidence 7778899844
No 310
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=22.11 E-value=1.8e+02 Score=32.89 Aligned_cols=62 Identities=16% Similarity=0.277 Sum_probs=35.1
Q ss_pred EeccCHhHHHHHHHHHhhC--C-eEEEEcCC-ccC---HHHHh--hCCeeEEeCCCCcHH--HHhhcCEEEecC
Q 001837 568 HSELLPEDKAKIINQFKQE--G-KTAMIGDG-IND---APALA--TADIGISMGISGSAL--ATETGQVILMSN 630 (1007)
Q Consensus 568 ~ar~sPeqK~~iV~~Lq~~--G-~VamVGDG-~ND---a~ALk--~ADVGIAmg~~gs~~--A~~aADiVLl~~ 630 (1007)
|.-+||..=.++++..+-. | .|+++|.| +== +.+|. .|.|-+.-. ...+. ....||+++.--
T Consensus 136 ~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs-~t~~l~~~~~~ADIvV~Av 208 (285)
T PRK14191 136 FVPATPMGVMRLLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHI-LTKDLSFYTQNADIVCVGV 208 (285)
T ss_pred CCCCcHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeC-CcHHHHHHHHhCCEEEEec
Confidence 3446776666666665432 6 79999998 222 12332 355655542 22222 356788887654
No 311
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=21.89 E-value=1.9e+02 Score=32.56 Aligned_cols=66 Identities=18% Similarity=0.314 Sum_probs=48.3
Q ss_pred cCcccccHHHHHHHHHHCCCeE---EEEcCCCHHHHH------HHHHHhCCCcceEE--eccCHhHHHHHHHHHhhC
Q 001837 521 SDACRTGAAEAVNQLKSLGIRT---AMLTGDNQSAAM------QAQEQLGNALNVVH--SELLPEDKAKIINQFKQE 586 (1007)
Q Consensus 521 ~D~lR~~a~eaI~~Lr~aGIkv---~mlTGD~~~tA~------~vA~~lGI~~~~V~--ar~sPeqK~~iV~~Lq~~ 586 (1007)
...++.+.++.|+.|++.|+++ +++-||++.... ..|+++||....+. ...+.++=...|+.|-+.
T Consensus 10 A~~i~~~ik~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~d 86 (282)
T PRK14182 10 AAKVKGEVATEVRALAARGVQTGLTVVRVGDDPASAIYVRGKRKDCEEVGITSVEHHLPATTTQAELLALIARLNAD 86 (282)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 4567889999999999999874 567899988765 56789999844322 234666667777777654
No 312
>cd01305 archeal_chlorohydrolases Predicted chlorohydrolases. These metallo-dependent hydrolases from archea are part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. They have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. Some members of this subgroup are predicted to be chlorohyrolases.
Probab=21.75 E-value=4.1e+02 Score=28.96 Aligned_cols=80 Identities=20% Similarity=0.334 Sum_probs=53.8
Q ss_pred HHHHHHHHHHCCCeEEEEcCCCHH----HHHHHHHHhCCCcceEEec-cCHhHHHHHHHHHhhCC-eEEEE-------cC
Q 001837 528 AAEAVNQLKSLGIRTAMLTGDNQS----AAMQAQEQLGNALNVVHSE-LLPEDKAKIINQFKQEG-KTAMI-------GD 594 (1007)
Q Consensus 528 a~eaI~~Lr~aGIkv~mlTGD~~~----tA~~vA~~lGI~~~~V~ar-~sPeqK~~iV~~Lq~~G-~VamV-------GD 594 (1007)
.++.++..++.|+.+.+=.+.... .....+.++|... ..++- ++++ .++.|++.| .+..+ |.
T Consensus 127 l~~~~~~A~~~g~~v~~H~~e~~~~~g~~~i~~~~~~~~~~-i~H~~~l~~~----~~~~la~~g~~v~~~P~sn~~l~~ 201 (263)
T cd01305 127 LEDILELLRRRGKLFAIHASETRESVGMTDIERALDLEPDL-LVHGTHLTDE----DLELVRENGVPVVLCPRSNLYFGV 201 (263)
T ss_pred HHHHHHHHHHCCCeeEEecCCCCCCCCchhHHHHHhCCCCE-EEEcCCCCHH----HHHHHHHcCCcEEEChhhHHHhCC
Confidence 889999999999887666543322 2223333445431 23333 3443 388888888 55544 88
Q ss_pred CccCHHHHhhCCeeEEeC
Q 001837 595 GINDAPALATADIGISMG 612 (1007)
Q Consensus 595 G~NDa~ALk~ADVGIAmg 612 (1007)
|....+.|.+++|-|++|
T Consensus 202 g~~p~~~l~~~Gv~v~lG 219 (263)
T cd01305 202 GIPPVAELLKLGIKVLLG 219 (263)
T ss_pred CCCCHHHHHHCCCcEEEE
Confidence 999999999999999998
No 313
>TIGR03679 arCOG00187 arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. This model has the same scope as an archaeal COG (arCOG00187) and is found in all completely sequenced archaea and does not recognize any known non-archaeal genes.
Probab=21.69 E-value=4.5e+02 Score=28.30 Aligned_cols=43 Identities=21% Similarity=0.161 Sum_probs=28.5
Q ss_pred HHHHHHHHHHCCCeEE-EEc------------CCCHHHHHHHHHHhCCCcceEEeccC
Q 001837 528 AAEAVNQLKSLGIRTA-MLT------------GDNQSAAMQAQEQLGNALNVVHSELL 572 (1007)
Q Consensus 528 a~eaI~~Lr~aGIkv~-mlT------------GD~~~tA~~vA~~lGI~~~~V~ar~s 572 (1007)
+.-++..+++.|.+|. ++| +.....+..+|+.+||. .....++
T Consensus 10 S~~al~~a~~~G~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~A~~lgip--~~~i~~~ 65 (218)
T TIGR03679 10 SNYALYKALEEGHEVRCLITVVPENEESYMFHTPNIELTRLQAEALGIP--LVKIETS 65 (218)
T ss_pred HHHHHHHHHHcCCEEEEEEEeccCCCCccccCCCCHHHHHHHHHHhCCC--EEEEECC
Confidence 3445666777788763 444 34667889999999998 4444433
No 314
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=21.64 E-value=1.9e+02 Score=31.71 Aligned_cols=86 Identities=19% Similarity=0.217 Sum_probs=53.7
Q ss_pred cccHHHHHHHHHHCCCeEEEEcC-CCHHHHHHHHHHhCCCcc---eEE----eccCHhHHH--HHHHHHhhCC-eEEEEc
Q 001837 525 RTGAAEAVNQLKSLGIRTAMLTG-DNQSAAMQAQEQLGNALN---VVH----SELLPEDKA--KIINQFKQEG-KTAMIG 593 (1007)
Q Consensus 525 R~~a~eaI~~Lr~aGIkv~mlTG-D~~~tA~~vA~~lGI~~~---~V~----ar~sPeqK~--~iV~~Lq~~G-~VamVG 593 (1007)
=++..+++++||+.|..+.++|- |.... .+-..+|+..- .+. .-..|+-+. ..++.+.... .++++|
T Consensus 115 ~~~~~~~lq~lR~~g~~l~iisN~d~r~~--~~l~~~~l~~~fD~vv~S~e~g~~KPDp~If~~al~~l~v~Pee~vhIg 192 (237)
T KOG3085|consen 115 LDGMQELLQKLRKKGTILGIISNFDDRLR--LLLLPLGLSAYFDFVVESCEVGLEKPDPRIFQLALERLGVKPEECVHIG 192 (237)
T ss_pred ccHHHHHHHHHHhCCeEEEEecCCcHHHH--HHhhccCHHHhhhhhhhhhhhccCCCChHHHHHHHHHhCCChHHeEEec
Confidence 34556999999999988888884 33332 55566665410 111 112354432 2344444443 699999
Q ss_pred CC-ccCHHHHhhCCe-eEEeC
Q 001837 594 DG-INDAPALATADI-GISMG 612 (1007)
Q Consensus 594 DG-~NDa~ALk~ADV-GIAmg 612 (1007)
|. .||..+-+.++. +|-+.
T Consensus 193 D~l~nD~~gA~~~G~~ailv~ 213 (237)
T KOG3085|consen 193 DLLENDYEGARNLGWHAILVD 213 (237)
T ss_pred CccccccHhHHHcCCEEEEEc
Confidence 95 899999888886 45553
No 315
>cd04726 KGPDC_HPS 3-Keto-L-gulonate 6-phosphate decarboxylase (KGPDC) and D-arabino-3-hexulose-6-phosphate synthase (HPS). KGPDC catalyzes the formation of L-xylulose 5-phosphate and carbon dioxide from 3-keto-L-gulonate 6-phosphate as part of the anaerobic pathway for L-ascorbate utilization in some eubacteria. HPS catalyzes the formation of D-arabino-3-hexulose-6-phosphate from D-ribulose 5-phosphate and formaldehyde in microorganisms that can use formaldehyde as a carbon source. Both catalyze reactions that involve the Mg2+-assisted formation and stabilization of 1,2-enediolate reaction intermediates.
Probab=21.64 E-value=5.5e+02 Score=26.61 Aligned_cols=83 Identities=17% Similarity=0.253 Sum_probs=47.5
Q ss_pred cHHHHHHHHHHCCCeEEE--EcCCCHHHHHHHHHHhCCCcceEEec--cCHhHH-----HHHHHHHhh-CCeEEEEcCCc
Q 001837 527 GAAEAVNQLKSLGIRTAM--LTGDNQSAAMQAQEQLGNALNVVHSE--LLPEDK-----AKIINQFKQ-EGKTAMIGDGI 596 (1007)
Q Consensus 527 ~a~eaI~~Lr~aGIkv~m--lTGD~~~tA~~vA~~lGI~~~~V~ar--~sPeqK-----~~iV~~Lq~-~G~VamVGDG~ 596 (1007)
...+.++.+++.|+++.+ ++=+++..+.. +...|.+ .+... ..+..+ .+.++.+++ ...-.+++-|+
T Consensus 91 ~~~~~i~~~~~~g~~~~v~~~~~~t~~e~~~-~~~~~~d--~v~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~~~GGI 167 (202)
T cd04726 91 TIKKAVKAAKKYGKEVQVDLIGVEDPEKRAK-LLKLGVD--IVILHRGIDAQAAGGWWPEDDLKKVKKLLGVKVAVAGGI 167 (202)
T ss_pred HHHHHHHHHHHcCCeEEEEEeCCCCHHHHHH-HHHCCCC--EEEEcCcccccccCCCCCHHHHHHHHhhcCCCEEEECCc
Confidence 467889999999999875 67777777776 6666776 33221 112221 344455554 24333444466
Q ss_pred c--CHHHHhhCCe-eEEeC
Q 001837 597 N--DAPALATADI-GISMG 612 (1007)
Q Consensus 597 N--Da~ALk~ADV-GIAmg 612 (1007)
| ++..+.++++ ++.+|
T Consensus 168 ~~~~i~~~~~~Gad~vvvG 186 (202)
T cd04726 168 TPDTLPEFKKAGADIVIVG 186 (202)
T ss_pred CHHHHHHHHhcCCCEEEEe
Confidence 5 4444444433 55555
No 316
>PF03129 HGTP_anticodon: Anticodon binding domain; InterPro: IPR004154 tRNA synthetases, or tRNA ligases are involved in protein synthesis. This domain is found in histidyl, glycyl, threonyl and prolyl tRNA synthetases [] it is probably the anticodon binding domain [].; GO: 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding; PDB: 1KOG_B 1EVL_D 1EVK_B 1QF6_A 1FYF_B 2I4O_A 2I4M_A 2I4N_A 2I4L_A 1HC7_D ....
Probab=21.62 E-value=2.2e+02 Score=25.67 Aligned_cols=48 Identities=21% Similarity=0.269 Sum_probs=38.5
Q ss_pred EEEEecC---cccccHHHHHHHHHHCCCeEEEE-cCCCHHHHHHHHHHhCCC
Q 001837 516 GIFCLSD---ACRTGAAEAVNQLKSLGIRTAML-TGDNQSAAMQAQEQLGNA 563 (1007)
Q Consensus 516 Gli~l~D---~lR~~a~eaI~~Lr~aGIkv~ml-TGD~~~tA~~vA~~lGI~ 563 (1007)
.++.+.+ ...+-+.+..+.|+++|+++.+- ++++......-|...|++
T Consensus 3 ~Ii~~~~~~~~~~~~a~~l~~~L~~~gi~v~~d~~~~~~~k~~~~a~~~g~p 54 (94)
T PF03129_consen 3 VIIPVGKKDEEIIEYAQELANKLRKAGIRVELDDSDKSLGKQIKYADKLGIP 54 (94)
T ss_dssp EEEESSCSHHHHHHHHHHHHHHHHHTTSEEEEESSSSTHHHHHHHHHHTTES
T ss_pred EEEEeCCCcHHHHHHHHHHHHHHHHCCCEEEEECCCCchhHHHHHHhhcCCe
Confidence 4566777 78888999999999999998777 666777777777777776
No 317
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=21.04 E-value=1.4e+02 Score=33.81 Aligned_cols=86 Identities=29% Similarity=0.427 Sum_probs=60.1
Q ss_pred EEEEecCcccccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHH---HhCCC---cceEEeccCHhHHHHHHHHHhhC---
Q 001837 516 GIFCLSDACRTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQE---QLGNA---LNVVHSELLPEDKAKIINQFKQE--- 586 (1007)
Q Consensus 516 Gli~l~D~lR~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~---~lGI~---~~~V~ar~sPeqK~~iV~~Lq~~--- 586 (1007)
|++-..+.+=|++.++++.|+++|-++.++|..+-.+-...++ ++|+. .+.+|. -=..+...|++.
T Consensus 31 GVlW~g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~~v~e~~i~s-----sa~~~a~ylk~~~~~ 105 (306)
T KOG2882|consen 31 GVLWLGEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFNSVKEENIFS-----SAYAIADYLKKRKPF 105 (306)
T ss_pred cceeecCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCccccCcccccC-----hHHHHHHHHHHhCcC
Confidence 6667788999999999999999999999999998888777665 55665 122322 233455555433
Q ss_pred C-eEEEE-cCCccCHHHHhhCCee
Q 001837 587 G-KTAMI-GDGINDAPALATADIG 608 (1007)
Q Consensus 587 G-~VamV-GDG~NDa~ALk~ADVG 608 (1007)
+ .|-.+ ++|+++ -|++|++-
T Consensus 106 ~k~Vyvig~~gi~~--eL~~aG~~ 127 (306)
T KOG2882|consen 106 GKKVYVIGEEGIRE--ELDEAGFE 127 (306)
T ss_pred CCeEEEecchhhhH--HHHHcCce
Confidence 2 56555 467875 66777753
No 318
>PTZ00445 p36-lilke protein; Provisional
Probab=20.95 E-value=62 Score=34.86 Aligned_cols=84 Identities=14% Similarity=0.136 Sum_probs=52.9
Q ss_pred ccccHHHHHHHHHHCCCeEEEEcCCCHHH---------------HHHHHHHhCCC--cceEEecc---------------
Q 001837 524 CRTGAAEAVNQLKSLGIRTAMLTGDNQSA---------------AMQAQEQLGNA--LNVVHSEL--------------- 571 (1007)
Q Consensus 524 lR~~a~eaI~~Lr~aGIkv~mlTGD~~~t---------------A~~vA~~lGI~--~~~V~ar~--------------- 571 (1007)
++|+.++.+++|+++||++.++|=-++.+ +.+.-+..+-. ...|||--
T Consensus 76 ~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~p~~y~~~gl 155 (219)
T PTZ00445 76 VTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFWQEPSDYRPLGL 155 (219)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHhcCccceeeeeeeeCCcccCChhhhhhhcc
Confidence 79999999999999999999999544433 22222322211 11343221
Q ss_pred ---CHhHHHH-HHHHHhhCC----eEEEEcCCccCHHHHhhCCe
Q 001837 572 ---LPEDKAK-IINQFKQEG----KTAMIGDGINDAPALATADI 607 (1007)
Q Consensus 572 ---sPeqK~~-iV~~Lq~~G----~VamVGDG~NDa~ALk~ADV 607 (1007)
.|+-|.. +-+.+++.| .++++=|....+.+-++.++
T Consensus 156 ~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi 199 (219)
T PTZ00445 156 DAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNALKEGY 199 (219)
T ss_pred cCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCC
Confidence 2333333 233344445 49999999999998888665
No 319
>PRK13111 trpA tryptophan synthase subunit alpha; Provisional
Probab=20.74 E-value=9.7e+02 Score=26.57 Aligned_cols=20 Identities=10% Similarity=0.258 Sum_probs=9.9
Q ss_pred cHHHHHHHHHHCCCeEEEEc
Q 001837 527 GAAEAVNQLKSLGIRTAMLT 546 (1007)
Q Consensus 527 ~a~eaI~~Lr~aGIkv~mlT 546 (1007)
+..+.+++++++|+.=+++-
T Consensus 105 G~e~f~~~~~~aGvdGviip 124 (258)
T PRK13111 105 GVERFAADAAEAGVDGLIIP 124 (258)
T ss_pred CHHHHHHHHHHcCCcEEEEC
Confidence 45555555555555444443
No 320
>PRK12415 fructose 1,6-bisphosphatase II; Reviewed
Probab=20.67 E-value=1.8e+02 Score=33.17 Aligned_cols=80 Identities=14% Similarity=0.271 Sum_probs=52.5
Q ss_pred cccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-hCCCcc---------------------eEEeccCHhHHHHHHHH
Q 001837 525 RTGAAEAVNQLKSLGIRTAMLTGDNQSAAMQAQEQ-LGNALN---------------------VVHSELLPEDKAKIINQ 582 (1007)
Q Consensus 525 R~~a~eaI~~Lr~aGIkv~mlTGD~~~tA~~vA~~-lGI~~~---------------------~V~ar~sPeqK~~iV~~ 582 (1007)
||.=.+.|+++|++|.++.+++.-+...|...+.. .|++.- .+.+|+-|+...+.-+.
T Consensus 164 RpRH~~lI~eir~~Gari~Li~DGDV~~ai~~~~~~~~vD~~~GiGGaPEGVlaAaAlkclGG~~q~rL~~~~~~e~~r~ 243 (322)
T PRK12415 164 RERHQDIIDRVRAKGARVKLFGDGDVGASIATALPGTGIDLFVGIGGAPEGVISAAALKCLGGEMQARLVPMNEEEEARC 243 (322)
T ss_pred CchHHHHHHHHHHcCCeEEEeccccHHHHHHHhCCCCCeeEEEEcCCChHHHHHHHHHHhCCceeEEEECCCCHHHHHHH
Confidence 44457899999999999999997666666655532 333311 57788766544333332
Q ss_pred Hh---------------hCC-eEEEEcCCccCHHHHhh
Q 001837 583 FK---------------QEG-KTAMIGDGINDAPALAT 604 (1007)
Q Consensus 583 Lq---------------~~G-~VamVGDG~NDa~ALk~ 604 (1007)
.+ -.| .|.|+.-|+.|-..|+-
T Consensus 244 ~~~Gi~D~~~v~~~ddlv~gd~v~FaATGvTdG~ll~G 281 (322)
T PRK12415 244 REMGLEDPRQLLMLDDLVSGDDAIFSATGVSAGELLDG 281 (322)
T ss_pred HHcCCcChhheeEHHHccCCCCEEEEEeCCCCCCCcCC
Confidence 22 113 58888889999887763
No 321
>PF01729 QRPTase_C: Quinolinate phosphoribosyl transferase, C-terminal domain; InterPro: IPR002638 Quinolinate phosphoribosyl transferase (QPRTase) or nicotinate-nucleotide pyrophosphorylase 2.4.2.19 from EC is involved in the de novo synthesis of NAD in both prokaryotes and eukaryotes. It catalyses the reaction of quinolinic acid with 5-phosphoribosyl-1-pyrophosphate (PRPP) in the presence of Mg2+ to give rise to nicotinic acid mononucleotide (NaMN), pyrophosphate and carbon dioxide [, ]. Unlike IPR004393 from INTERPRO, this domain also includes the molybdenum transport system protein ModD.; GO: 0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity, 0009435 NAD biosynthetic process; PDB: 3C2O_A 3C2F_A 3C2E_A 3C2R_A 3C2V_A 1QPN_E 1QPO_A 1QPQ_F 1QPR_E 2I14_D ....
Probab=20.51 E-value=6.2e+02 Score=26.23 Aligned_cols=83 Identities=19% Similarity=0.321 Sum_probs=58.3
Q ss_pred cHHHHHHHHHHC-CCe-EEEEcCCCHHHHHHHHHHhCCCcceE-EeccCHhHHHHHHHHHhhCC--eEEEEcCC--ccCH
Q 001837 527 GAAEAVNQLKSL-GIR-TAMLTGDNQSAAMQAQEQLGNALNVV-HSELLPEDKAKIINQFKQEG--KTAMIGDG--INDA 599 (1007)
Q Consensus 527 ~a~eaI~~Lr~a-GIk-v~mlTGD~~~tA~~vA~~lGI~~~~V-~ar~sPeqK~~iV~~Lq~~G--~VamVGDG--~NDa 599 (1007)
+..++++++++. .-+ .+.+-.|+.+.+.... +.|.+ .| +-+++|++=.++++.++..+ ....+--| .+.+
T Consensus 65 ~i~~av~~~~~~~~~~~~I~VEv~~~ee~~ea~-~~g~d--~I~lD~~~~~~~~~~v~~l~~~~~~v~ie~SGGI~~~ni 141 (169)
T PF01729_consen 65 GIEEAVKAARQAAPEKKKIEVEVENLEEAEEAL-EAGAD--IIMLDNMSPEDLKEAVEELRELNPRVKIEASGGITLENI 141 (169)
T ss_dssp SHHHHHHHHHHHSTTTSEEEEEESSHHHHHHHH-HTT-S--EEEEES-CHHHHHHHHHHHHHHTTTSEEEEESSSSTTTH
T ss_pred CHHHHHHHHHHhCCCCceEEEEcCCHHHHHHHH-HhCCC--EEEecCcCHHHHHHHHHHHhhcCCcEEEEEECCCCHHHH
Confidence 478888888875 233 3777888887777644 46655 44 56899999999999998764 44555445 5568
Q ss_pred HHHhhCCe-eEEeC
Q 001837 600 PALATADI-GISMG 612 (1007)
Q Consensus 600 ~ALk~ADV-GIAmg 612 (1007)
+.+.+.+| .|++|
T Consensus 142 ~~ya~~gvD~isvg 155 (169)
T PF01729_consen 142 AEYAKTGVDVISVG 155 (169)
T ss_dssp HHHHHTT-SEEEEC
T ss_pred HHHHhcCCCEEEcC
Confidence 89999987 67886
No 322
>COG2966 Uncharacterized conserved protein [Function unknown]
Probab=20.45 E-value=8e+02 Score=27.19 Aligned_cols=32 Identities=19% Similarity=0.320 Sum_probs=16.3
Q ss_pred HHHHHHHHHhC---CCCeeEEEEecCCCeEEEEEc
Q 001837 24 EVPLIENILKS---LEGVKEVSVIVPSRTVIVLHD 55 (1007)
Q Consensus 24 Ca~~IE~~L~~---l~GV~~v~Vn~~t~tv~V~~D 55 (1007)
...++|+.+.+ .-|+.++.+......+.+..+
T Consensus 32 es~rve~~~~ria~a~g~~~~~~~vt~t~Ii~s~~ 66 (250)
T COG2966 32 ESYRVEETMNRIARALGLESVESFVTPTAIILSTE 66 (250)
T ss_pred hHhHHHHHHHHHHHHcCCCcceeeccCceEEEEec
Confidence 33444444433 347776666555555555443
No 323
>PRK07428 nicotinate-nucleotide pyrophosphorylase; Provisional
Probab=20.41 E-value=7.3e+02 Score=28.12 Aligned_cols=96 Identities=14% Similarity=0.165 Sum_probs=65.8
Q ss_pred cHHHHHHHHHHC-CC-eEEEEcCCCHHHHHHHHHHhCCCcceE-EeccCHhHHHHHHHHHhhC--C-eEEEEc-CCccCH
Q 001837 527 GAAEAVNQLKSL-GI-RTAMLTGDNQSAAMQAQEQLGNALNVV-HSELLPEDKAKIINQFKQE--G-KTAMIG-DGINDA 599 (1007)
Q Consensus 527 ~a~eaI~~Lr~a-GI-kv~mlTGD~~~tA~~vA~~lGI~~~~V-~ar~sPeqK~~iV~~Lq~~--G-~VamVG-DG~NDa 599 (1007)
+..++|+++|+. +. +.+-++=++.+-|...+ +.|.+ .+ +-+++|++=.++++.+++. . .+.+.| =...++
T Consensus 181 ~i~~av~~~r~~~~~~~~I~VEv~tleea~eA~-~~GaD--~I~LDn~~~e~l~~av~~~~~~~~~i~leAsGGIt~~ni 257 (288)
T PRK07428 181 GIGEAITRIRQRIPYPLTIEVETETLEQVQEAL-EYGAD--IIMLDNMPVDLMQQAVQLIRQQNPRVKIEASGNITLETI 257 (288)
T ss_pred CHHHHHHHHHHhCCCCCEEEEECCCHHHHHHHH-HcCCC--EEEECCCCHHHHHHHHHHHHhcCCCeEEEEECCCCHHHH
Confidence 488999999984 42 44667778887777655 67766 55 6799999999999988763 3 455554 245567
Q ss_pred HHHhhCCe-eEEeCCCCcHHHHhhcCEEE
Q 001837 600 PALATADI-GISMGISGSALATETGQVIL 627 (1007)
Q Consensus 600 ~ALk~ADV-GIAmg~~gs~~A~~aADiVL 627 (1007)
+.+.+++| +|++| +-. -.....|+-+
T Consensus 258 ~~ya~tGvD~Isvg-sl~-~sa~~~Dis~ 284 (288)
T PRK07428 258 RAVAETGVDYISSS-API-TRSPWLDLSM 284 (288)
T ss_pred HHHHHcCCCEEEEc-hhh-hCCCccceEE
Confidence 88888888 68886 211 1234566654
No 324
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=20.14 E-value=2e+02 Score=32.43 Aligned_cols=43 Identities=30% Similarity=0.417 Sum_probs=26.8
Q ss_pred cCcccccHHHHHHHHHHCCCeE---EEEcCCCHHHHH------HHHHHhCCC
Q 001837 521 SDACRTGAAEAVNQLKSLGIRT---AMLTGDNQSAAM------QAQEQLGNA 563 (1007)
Q Consensus 521 ~D~lR~~a~eaI~~Lr~aGIkv---~mlTGD~~~tA~------~vA~~lGI~ 563 (1007)
.+.+|.++++.+++|++.|+++ +++-||++.... ..|+++||.
T Consensus 12 A~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~ 63 (284)
T PRK14190 12 AKEKREQLKEEVVKLKEQGIVPGLAVILVGDDPASHSYVRGKKKAAEKVGIY 63 (284)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCE
Confidence 3456777777777777767653 444577765543 345666664
Done!