BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001838
(1007 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 170 bits (430), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 182/643 (28%), Positives = 275/643 (42%), Gaps = 128/643 (19%)
Query: 73 LNISGFNLQGTIPPQLGNLSSLETLDLSHNKLSGNIPSSIFNMHTLKLLDFRDNQLFGSL 132
L++S N IP LG+ S+L+ LD+S NKLSG+ +I LKLL+ NQ G +
Sbjct: 202 LDVSSNNFSTGIP-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPI 260
Query: 133 SSFIFNMSSMLGIDLSINRFSGELPANICXXXXXXXXXXXGRNMFHGKIPSTLSKCKQLE 192
+ S+ + L+ N+F+GE+P + N F+G +P C LE
Sbjct: 261 PPLP--LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLE 318
Query: 193 GLYLRFNNLSGAIPKE-IGNLTKLKDIILNDNELRGEIPQEMGNL-PYLVRLTLATNNLV 250
L L NN SG +P + + + LK + L+ NE GE+P+ + NL L+ L L++NN
Sbjct: 319 SLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFS 378
Query: 251 GVVPFTIFNMSTLKKLSLLENTLWGSLPSRIDLSLPNVEFLNLGTNRFSGNIPSSITNAS 310
G + + N+ K +L E L L N F+G IP +++N S
Sbjct: 379 GPI---LPNLCQNPKNTLQE--------------------LYLQNNGFTGKIPPTLSNCS 415
Query: 311 KLTVFQLRGNSFSGFIPNTIGNLRNLEFLNIADNYLTSSTPELSFLSSLTNCQKIRVLIL 370
+L L N SG IP+++G+L L L + N L P+ L + + LIL
Sbjct: 416 ELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQ-----ELMYVKTLETLIL 470
Query: 371 AGNPLDGILPSSIGNLSISLERFQMFNCRISGKIPQVISXXXXXXXXXXXXXXXXXSIPV 430
N L G +PS + N + +L + N R++G+IP+ I
Sbjct: 471 DFNDLTGEIPSGLSNCT-NLNWISLSNNRLTGEIPKWIG--------------------- 508
Query: 431 TFSRLLNLQGLGLAFNKLARSIPDEICHLAKLDKLILHGNKFSGAIPSC----------- 479
RL NL L L+ N + +IP E+ L L L+ N F+G IP+
Sbjct: 509 ---RLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAAN 565
Query: 480 ---------------------SGNLTSLRALYLGS-NRFTSALPSTIW------------ 505
+GNL + + NR ++ P I
Sbjct: 566 FIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTF 625
Query: 506 -NLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRNNLSGDIPITIGGLKNLQKLFLA 564
N ++F D+S N L G + +IG++ + LNL N++SG IP +G L+ L L L+
Sbjct: 626 DNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLS 685
Query: 565 NNRLEGPIPESFSGLSSLEILDLSKNKISGVIPTXXXXXXXXXXXXXXXXXXXGEIPRGG 624
+N+L+G IP++ S L+ L +DLS N +SG IP G
Sbjct: 686 SNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM------------------------G 721
Query: 625 PFANLTAKSFLGNELLCGLPDLHNSPCKLNKPKTHHKSRKMML 667
F FL N LCG P P + H +S L
Sbjct: 722 QFETFPPAKFLNNPGLCGYPLPRCDPSNADGYAHHQRSHGRRL 764
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 152/543 (27%), Positives = 252/543 (46%), Gaps = 54/543 (9%)
Query: 48 NWTSSTSVCSWIGITCGVNSHKVIVLNIS------GF---------------------NL 80
+W+S+ + C++ G+TC KV +++S GF ++
Sbjct: 29 DWSSNKNPCTFDGVTC--RDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHI 86
Query: 81 QGTIPPQLGNLSSLETLDLSHNKLSGNIP--SSIFNMHTLKLLDFRDNQL-FGSLSSFIF 137
G++ +SL +LDLS N LSG + +S+ + LK L+ N L F S
Sbjct: 87 NGSV-SGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGL 145
Query: 138 NMSSMLGIDLSINRFSGELPANICXXXXXX-----XXXXXGRNMFHGKIPSTLSKCKQLE 192
++S+ +DLS N SG AN+ N G + +S+C LE
Sbjct: 146 KLNSLEVLDLSANSISG---ANVVGWVLSDGCGELKHLAISGNKISGDV--DVSRCVNLE 200
Query: 193 GLYLRFNNLSGAIPKEIGNLTKLKDIILNDNELRGEIPQEMGNLPYLVRLTLATNNLVGV 252
L + NN S IP +G+ + L+ + ++ N+L G+ + + L L +++N VG
Sbjct: 201 FLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGP 259
Query: 253 VPFTIFNMSTLKKLSLLENTLWGSLPSRIDLSLPNVEFLNLGTNRFSGNIPSSITNASKL 312
+P + +L+ LSL EN G +P + + + L+L N F G +P + S L
Sbjct: 260 IP--PLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLL 317
Query: 313 TVFQLRGNSFSGFIP-NTIGNLRNLEFLNIADNYLTSSTPELSFLSSLTN-CQKIRVLIL 370
L N+FSG +P +T+ +R L+ L+++ N + PE SLTN + L L
Sbjct: 318 ESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPE-----SLTNLSASLLTLDL 372
Query: 371 AGNPLDG-ILPSSIGNLSISLERFQMFNCRISGKIPQVISXXXXXXXXXXXXXXXXXSIP 429
+ N G ILP+ N +L+ + N +GKIP +S +IP
Sbjct: 373 SSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIP 432
Query: 430 VTFSRLLNLQGLGLAFNKLARSIPDEICHLAKLDKLILHGNKFSGAIPSCSGNLTSLRAL 489
+ L L+ L L N L IP E+ ++ L+ LIL N +G IPS N T+L +
Sbjct: 433 SSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWI 492
Query: 490 YLGSNRFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRNNLSGDIP 549
L +NR T +P I L+++ +S+NS G + ++G+ + +I L+L+ N +G IP
Sbjct: 493 SLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 552
Query: 550 ITI 552
+
Sbjct: 553 AAM 555
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 146/338 (43%), Gaps = 24/338 (7%)
Query: 66 NSHKVIVLNISGFNLQGTIPPQLGNLSSLETLDLSHNKLSGNIPSSIFNMHTLKLLDFRD 125
N +++ L++S L GTIP LG+LS L L L N L G IP + + TL+ L
Sbjct: 413 NCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDF 472
Query: 126 NQLFGSLSSFIFNMSSMLGIDLSINRFSGELPANICXXXXXXXXXXXGRNMFHGKIPSTL 185
N L G + S + N +++ I LS NR +GE+P I N F G IP+ L
Sbjct: 473 NDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWI-GRLENLAILKLSNNSFSGNIPAEL 531
Query: 186 SKCKQLEGLYLRFNNLSGAIP----KEIGNLT------KLKDIILNDN------------ 223
C+ L L L N +G IP K+ G + K I ND
Sbjct: 532 GDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLL 591
Query: 224 ELRGEIPQEMGNLPYLVRLTLATNNLVGVVPFTIFNMSTLKKLSLLENTLWGSLPSRIDL 283
E +G +++ L + + G T N ++ L + N L G +P I
Sbjct: 592 EFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIG- 650
Query: 284 SLPNVEFLNLGTNRFSGNIPSSITNASKLTVFQLRGNSFSGFIPNTIGNLRNLEFLNIAD 343
S+P + LNLG N SG+IP + + L + L N G IP + L L +++++
Sbjct: 651 SMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSN 710
Query: 344 NYLTSSTPELSFLSSLTNCQKIRVLILAGNPLDGILPS 381
N L+ PE+ + + + L G PL PS
Sbjct: 711 NNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLPRCDPS 748
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 167 bits (423), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 178/620 (28%), Positives = 269/620 (43%), Gaps = 128/620 (20%)
Query: 73 LNISGFNLQGTIPPQLGNLSSLETLDLSHNKLSGNIPSSIFNMHTLKLLDFRDNQLFGSL 132
L++S N IP LG+ S+L+ LD+S NKLSG+ +I LKLL+ NQ G +
Sbjct: 205 LDVSSNNFSTGIP-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPI 263
Query: 133 SSFIFNMSSMLGIDLSINRFSGELPANICXXXXXXXXXXXGRNMFHGKIPSTLSKCKQLE 192
+ S+ + L+ N+F+GE+P + N F+G +P C LE
Sbjct: 264 PPLP--LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLE 321
Query: 193 GLYLRFNNLSGAIPKE-IGNLTKLKDIILNDNELRGEIPQEMGNL-PYLVRLTLATNNLV 250
L L NN SG +P + + + LK + L+ NE GE+P+ + NL L+ L L++NN
Sbjct: 322 SLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFS 381
Query: 251 GVVPFTIFNMSTLKKLSLLENTLWGSLPSRIDLSLPNVEFLNLGTNRFSGNIPSSITNAS 310
G + + N+ K +L E L L N F+G IP +++N S
Sbjct: 382 GPI---LPNLCQNPKNTLQE--------------------LYLQNNGFTGKIPPTLSNCS 418
Query: 311 KLTVFQLRGNSFSGFIPNTIGNLRNLEFLNIADNYLTSSTPELSFLSSLTNCQKIRVLIL 370
+L L N SG IP+++G+L L L + N L P+ L + + LIL
Sbjct: 419 ELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQ-----ELMYVKTLETLIL 473
Query: 371 AGNPLDGILPSSIGNLSISLERFQMFNCRISGKIPQVISXXXXXXXXXXXXXXXXXSIPV 430
N L G +PS + N + +L + N R++G+IP+ I
Sbjct: 474 DFNDLTGEIPSGLSNCT-NLNWISLSNNRLTGEIPKWIG--------------------- 511
Query: 431 TFSRLLNLQGLGLAFNKLARSIPDEICHLAKLDKLILHGNKFSGAIPSC----------- 479
RL NL L L+ N + +IP E+ L L L+ N F+G IP+
Sbjct: 512 ---RLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAAN 568
Query: 480 ---------------------SGNLTSLRALYLGS-NRFTSALPSTIW------------ 505
+GNL + + NR ++ P I
Sbjct: 569 FIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTF 628
Query: 506 -NLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRNNLSGDIPITIGGLKNLQKLFLA 564
N ++F D+S N L G + +IG++ + LNL N++SG IP +G L+ L L L+
Sbjct: 629 DNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLS 688
Query: 565 NNRLEGPIPESFSGLSSLEILDLSKNKISGVIPTXXXXXXXXXXXXXXXXXXXGEIPRGG 624
+N+L+G IP++ S L+ L +DLS N +SG IP G
Sbjct: 689 SNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM------------------------G 724
Query: 625 PFANLTAKSFLGNELLCGLP 644
F FL N LCG P
Sbjct: 725 QFETFPPAKFLNNPGLCGYP 744
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 152/543 (27%), Positives = 252/543 (46%), Gaps = 54/543 (9%)
Query: 48 NWTSSTSVCSWIGITCGVNSHKVIVLNIS------GF---------------------NL 80
+W+S+ + C++ G+TC KV +++S GF ++
Sbjct: 32 DWSSNKNPCTFDGVTC--RDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHI 89
Query: 81 QGTIPPQLGNLSSLETLDLSHNKLSGNIP--SSIFNMHTLKLLDFRDNQL-FGSLSSFIF 137
G++ +SL +LDLS N LSG + +S+ + LK L+ N L F S
Sbjct: 90 NGSV-SGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGL 148
Query: 138 NMSSMLGIDLSINRFSGELPANICXXXXXX-----XXXXXGRNMFHGKIPSTLSKCKQLE 192
++S+ +DLS N SG AN+ N G + +S+C LE
Sbjct: 149 KLNSLEVLDLSANSISG---ANVVGWVLSDGCGELKHLAISGNKISGDV--DVSRCVNLE 203
Query: 193 GLYLRFNNLSGAIPKEIGNLTKLKDIILNDNELRGEIPQEMGNLPYLVRLTLATNNLVGV 252
L + NN S IP +G+ + L+ + ++ N+L G+ + + L L +++N VG
Sbjct: 204 FLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGP 262
Query: 253 VPFTIFNMSTLKKLSLLENTLWGSLPSRIDLSLPNVEFLNLGTNRFSGNIPSSITNASKL 312
+P + +L+ LSL EN G +P + + + L+L N F G +P + S L
Sbjct: 263 IP--PLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLL 320
Query: 313 TVFQLRGNSFSGFIP-NTIGNLRNLEFLNIADNYLTSSTPELSFLSSLTN-CQKIRVLIL 370
L N+FSG +P +T+ +R L+ L+++ N + PE SLTN + L L
Sbjct: 321 ESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPE-----SLTNLSASLLTLDL 375
Query: 371 AGNPLDG-ILPSSIGNLSISLERFQMFNCRISGKIPQVISXXXXXXXXXXXXXXXXXSIP 429
+ N G ILP+ N +L+ + N +GKIP +S +IP
Sbjct: 376 SSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIP 435
Query: 430 VTFSRLLNLQGLGLAFNKLARSIPDEICHLAKLDKLILHGNKFSGAIPSCSGNLTSLRAL 489
+ L L+ L L N L IP E+ ++ L+ LIL N +G IPS N T+L +
Sbjct: 436 SSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWI 495
Query: 490 YLGSNRFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRNNLSGDIP 549
L +NR T +P I L+++ +S+NS G + ++G+ + +I L+L+ N +G IP
Sbjct: 496 SLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 555
Query: 550 ITI 552
+
Sbjct: 556 AAM 558
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 146/338 (43%), Gaps = 24/338 (7%)
Query: 66 NSHKVIVLNISGFNLQGTIPPQLGNLSSLETLDLSHNKLSGNIPSSIFNMHTLKLLDFRD 125
N +++ L++S L GTIP LG+LS L L L N L G IP + + TL+ L
Sbjct: 416 NCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDF 475
Query: 126 NQLFGSLSSFIFNMSSMLGIDLSINRFSGELPANICXXXXXXXXXXXGRNMFHGKIPSTL 185
N L G + S + N +++ I LS NR +GE+P I N F G IP+ L
Sbjct: 476 NDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWI-GRLENLAILKLSNNSFSGNIPAEL 534
Query: 186 SKCKQLEGLYLRFNNLSGAIP----KEIGNLT------KLKDIILNDN------------ 223
C+ L L L N +G IP K+ G + K I ND
Sbjct: 535 GDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLL 594
Query: 224 ELRGEIPQEMGNLPYLVRLTLATNNLVGVVPFTIFNMSTLKKLSLLENTLWGSLPSRIDL 283
E +G +++ L + + G T N ++ L + N L G +P I
Sbjct: 595 EFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIG- 653
Query: 284 SLPNVEFLNLGTNRFSGNIPSSITNASKLTVFQLRGNSFSGFIPNTIGNLRNLEFLNIAD 343
S+P + LNLG N SG+IP + + L + L N G IP + L L +++++
Sbjct: 654 SMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSN 713
Query: 344 NYLTSSTPELSFLSSLTNCQKIRVLILAGNPLDGILPS 381
N L+ PE+ + + + L G PL PS
Sbjct: 714 NNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLPRCDPS 751
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/297 (32%), Positives = 145/297 (48%), Gaps = 27/297 (9%)
Query: 713 IRRFSYHELLQATDRFSKNNLLGIGSFGSVYVARLQDGMEVAVKVF-HQRYERALKSFQD 771
++RFS EL A+D FS N+LG G FG VY RL DG VAVK +R + FQ
Sbjct: 25 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQT 84
Query: 772 ECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLY---SGTCMLDIFQRLNI 828
E E++ HRNL+++ C + L+ YM NGS+ + L LD +R I
Sbjct: 85 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 144
Query: 829 MIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLSMQTQT 876
+ A L YLH IIH V A + DF +AK ++ +D +
Sbjct: 145 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-XHVXXAV 203
Query: 877 LATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIG---ELSLSRWVNDL 933
TIG++APEY G+ S + DV+ YG+ML+E TG++ D + ++ L WV L
Sbjct: 204 RGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 263
Query: 934 LPISVME-VIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGL 989
L +E ++D +L K++ + ++ +A CT SP +R E+V L
Sbjct: 264 LKEKKLEALVDVDLQGN------YKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 130 bits (328), Expect = 3e-30, Method: Composition-based stats.
Identities = 99/298 (33%), Positives = 147/298 (49%), Gaps = 29/298 (9%)
Query: 713 IRRFSYHELLQATDRFSKNNLLGIGSFGSVYVARLQDGMEVAVKVF-HQRYERALKSFQD 771
++RFS EL A+D F N+LG G FG VY RL DG VAVK +R + FQ
Sbjct: 17 LKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQT 76
Query: 772 ECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLY---SGTCMLDIFQRLNI 828
E E++ HRNL+++ C + L+ YM NGS+ + L LD +R I
Sbjct: 77 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 136
Query: 829 MIDVALALEYLHFGHSTP-IIHYMV------------AHISDFSIAKFLNGQDQLSMQTQ 875
+ A L YLH H P IIH V A + DF +AK ++ +D +
Sbjct: 137 ALGSARGLAYLH-DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDX-HVXXA 194
Query: 876 TLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIG---ELSLSRWVND 932
IG++APEY G+ S + DV+ YG+ML+E TG++ D + ++ L WV
Sbjct: 195 VRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 254
Query: 933 LLPISVME-VIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGL 989
LL +E ++D +L + Y K++ + ++ +A CT SP +R E+V L
Sbjct: 255 LLKEKKLEALVDVDL---QGNY---KDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 155/330 (46%), Gaps = 41/330 (12%)
Query: 696 WKSITGSSNDGINSPQAIRRFSYH----ELLQATDRFSKNNLLGIGSFGSVYVARLQDGM 751
+ T S ND ++S + SY +L +AT+ F L+G G FG VY L+DG
Sbjct: 5 YSKATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGA 64
Query: 752 EVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLEN 811
+VA+K + ++ F+ E E + RH +LV +I C + LI +YM NG+L+
Sbjct: 65 KVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKR 124
Query: 812 RLYSG---TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHY------------MVAHIS 856
LY T + QRL I I A L YL H+ IIH V I+
Sbjct: 125 HLYGSDLPTMSMSWEQRLEICIGAARGLHYL---HTRAIIHRDVKSINILLDENFVPKIT 181
Query: 857 DFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKK-- 914
DF I+K DQ + T+GY+ PEY ++GR++ + DVYS+G++L E +
Sbjct: 182 DFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAI 241
Query: 915 ----PTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATE 970
P + + + E ++ N L +++D NL + +SL + A +
Sbjct: 242 VQSLPREMVNLAEWAVESHNNGQLE----QIVDPNLAD------KIRPESLRKFGDTAVK 291
Query: 971 CTIESPGKRINAREIVTGL---LKIRDTLV 997
C S R + +++ L L+++++++
Sbjct: 292 CLALSSEDRPSMGDVLWKLEYALRLQESVI 321
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 154/330 (46%), Gaps = 41/330 (12%)
Query: 696 WKSITGSSNDGINSPQAIRRFSYH----ELLQATDRFSKNNLLGIGSFGSVYVARLQDGM 751
+ T S ND ++S + SY +L +AT+ F L+G G FG VY L+DG
Sbjct: 5 YSKATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGA 64
Query: 752 EVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLEN 811
+VA+K + ++ F+ E E + RH +LV +I C + LI +YM NG+L+
Sbjct: 65 KVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKR 124
Query: 812 RLYSG---TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHY------------MVAHIS 856
LY T + QRL I I A L YL H+ IIH V I+
Sbjct: 125 HLYGSDLPTMSMSWEQRLEICIGAARGLHYL---HTRAIIHRDVKSINILLDENFVPKIT 181
Query: 857 DFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKK-- 914
DF I+K Q + T+GY+ PEY ++GR++ + DVYS+G++L E +
Sbjct: 182 DFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAI 241
Query: 915 ----PTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATE 970
P + + + E ++ N L +++D NL + +SL + A +
Sbjct: 242 VQSLPREMVNLAEWAVESHNNGQLE----QIVDPNLAD------KIRPESLRKFGDTAVK 291
Query: 971 CTIESPGKRINAREIVTGL---LKIRDTLV 997
C S R + +++ L L+++++++
Sbjct: 292 CLALSSEDRPSMGDVLWKLEYALRLQESVI 321
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 109/224 (48%), Gaps = 23/224 (10%)
Query: 716 FSYHELLQATDRFSKN------NLLGIGSFGSVYVARLQDGMEVAVKVFHQRY----ERA 765
FS++EL T+ F + N +G G FG VY + + VAVK E
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 766 LKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRL--YSGTCMLDIF 823
+ F E +VM + +H NLV+++ S+ D L+ YMPNGSL +RL GT L
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 824 QRLNIMIDVALALEYLHFGH-------STPII--HYMVAHISDFSIAKFLNGQDQLSMQT 874
R I A + +LH H S I+ A ISDF +A+ Q M +
Sbjct: 134 MRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXS 193
Query: 875 QTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDE 918
+ + T YMAPE ++G ++ + D+YS+G++L+E TG DE
Sbjct: 194 RIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDE 236
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 108/224 (48%), Gaps = 23/224 (10%)
Query: 716 FSYHELLQATDRFSKN------NLLGIGSFGSVYVARLQDGMEVAVKVFHQRY----ERA 765
FS++EL T+ F + N +G G FG VY + + VAVK E
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 766 LKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRL--YSGTCMLDIF 823
+ F E +VM + +H NLV+++ S+ D L+ YMPNGSL +RL GT L
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 824 QRLNIMIDVALALEYLHFGH-------STPII--HYMVAHISDFSIAKFLNGQDQLSMQT 874
R I A + +LH H S I+ A ISDF +A+ Q M
Sbjct: 134 MRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXX 193
Query: 875 QTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDE 918
+ + T YMAPE ++G ++ + D+YS+G++L+E TG DE
Sbjct: 194 RIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDE 236
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 108/224 (48%), Gaps = 23/224 (10%)
Query: 716 FSYHELLQATDRFSKN------NLLGIGSFGSVYVARLQDGMEVAVKVFHQRY----ERA 765
FS++EL T+ F + N +G G FG VY + + VAVK E
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 67
Query: 766 LKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRL--YSGTCMLDIF 823
+ F E +VM + +H NLV+++ S+ D L+ YMPNGSL +RL GT L
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 127
Query: 824 QRLNIMIDVALALEYLHFGH-------STPII--HYMVAHISDFSIAKFLNGQDQLSMQT 874
R I A + +LH H S I+ A ISDF +A+ Q M
Sbjct: 128 MRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXX 187
Query: 875 QTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDE 918
+ + T YMAPE ++G ++ + D+YS+G++L+E TG DE
Sbjct: 188 RIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDE 230
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 27/244 (11%)
Query: 402 GKIPQVISXXXXXXXXXXXXXXXXXSIPVTFSRLLNLQGLGLAFNKLARSIPDEICHLAK 461
G IP I+ +IP S++ L L ++N L+ ++P I L
Sbjct: 91 GPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPN 150
Query: 462 LDKLILHGNKFSGAIPSCSGNLTSL-RALYLGSNRFTSALPSTIWNLKDILFFDVSSNSL 520
L + GN+ SGAIP G+ + L ++ + NR T +P T NL ++ F D+S N L
Sbjct: 151 LVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLSRNML 209
Query: 521 DGPLSLDIGNLKVVIELNLSRNNLSGDIPITIGGLKNLQKLFLANNRLEGPIPESFSGLS 580
+G S+ G+ K +++L++N+L+ D+ +G KNL L L NNR+ G +P+ + L
Sbjct: 210 EGDASVLFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLK 268
Query: 581 SLEILDLSKNKISGVIPTXXXXXXXXXXXXXXXXXXXGEIPRGGPFANLTAKSFLGNELL 640
L L++S N + GEIP+GG ++ N+ L
Sbjct: 269 FLHSLNVSFNNLC------------------------GEIPQGGNLQRFDVSAYANNKCL 304
Query: 641 CGLP 644
CG P
Sbjct: 305 CGSP 308
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 124/283 (43%), Gaps = 58/283 (20%)
Query: 26 DQQSLLALKAHISYDPTNLFAKNWTSSTSVC--SWIGITCGVNS--HKVIVLNISGFNLQ 81
D+Q+LL +K + +PT L +W +T C +W+G+ C ++ ++V L++SG NL
Sbjct: 7 DKQALLQIKKDLG-NPTTL--SSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLP 63
Query: 82 ---------------------------GTIPPQLGNLSSLETLDLSHNKLSGNIPSSIFN 114
G IPP + L+ L L ++H +SG IP +
Sbjct: 64 KPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQ 123
Query: 115 MHTLKLLDFRDNQLFGSLSSFIFNMSSMLGIDLSINRFSGELPANICXXXXXXXXXXXGR 174
+ TL LDF N L G+L I ++ +++GI NR SG +P + R
Sbjct: 124 IKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISR 183
Query: 175 NMFHGKIPSTLSKC-----------------------KQLEGLYLRFNNLSGAIPKEIGN 211
N GKIP T + K + ++L N+L+ + K +G
Sbjct: 184 NRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGL 242
Query: 212 LTKLKDIILNDNELRGEIPQEMGNLPYLVRLTLATNNLVGVVP 254
L + L +N + G +PQ + L +L L ++ NNL G +P
Sbjct: 243 SKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 90/192 (46%), Gaps = 8/192 (4%)
Query: 173 GRNMFHGKIPSTLSKCKQLEGLYLRFNNLSGAIPKEIGNLTKLKDIILNDNELRGEIPQE 232
G N G IP ++K QL LY+ N+SGAIP + + L + + N L G +P
Sbjct: 85 GINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPS 144
Query: 233 MGNLPYLVRLTLATNNLVGVVPFTIFNMSTL-KKLSLLENTLWGSLPSRIDLSLPNVEFL 291
+ +LP LV +T N + G +P + + S L +++ N L G +P + N+ F+
Sbjct: 145 ISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPT--FANLNLAFV 202
Query: 292 NLGTNRFSGNIPSSITNASKLTVFQLRGNSFSGFIPNTIGNLRNLEFLNIADNYLTSSTP 351
+L N G+ + L NS + F +G +NL L++ +N + + P
Sbjct: 203 DLSRNMLEGDASVLFGSDKNTQKIHLAKNSLA-FDLGKVGLSKNLNGLDLRNNRIYGTLP 261
Query: 352 ----ELSFLSSL 359
+L FL SL
Sbjct: 262 QGLTQLKFLHSL 273
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 65/124 (52%), Gaps = 2/124 (1%)
Query: 476 IPSCSGNLTSLRALYLGS-NRFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVV 534
IPS NL L LY+G N +P I L + + ++ ++ G + + +K +
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 535 IELNLSRNNLSGDIPITIGGLKNLQKLFLANNRLEGPIPESFSGLSSL-EILDLSKNKIS 593
+ L+ S N LSG +P +I L NL + NR+ G IP+S+ S L + +S+N+++
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLT 187
Query: 594 GVIP 597
G IP
Sbjct: 188 GKIP 191
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 101/244 (41%), Gaps = 15/244 (6%)
Query: 278 PSRIDLSLPNVEFLNL----GTNRFSGNIPSSITNASKLTVFQLRGNSFSGFIPNTIGNL 333
P I SL N+ +LN G N G IP +I ++L + + SG IP+ + +
Sbjct: 65 PYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQI 124
Query: 334 RNLEFLNIADNYLTSSTPELSFLSSLTNCQKIRVLILAGNPLDGILPSSIGNLSISLERF 393
+ L L+ + N L+ + P +SSL N I GN + G +P S G+ S
Sbjct: 125 KTLVTLDFSYNALSGTLPP--SISSLPNLVGI---TFDGNRISGAIPDSYGSFSKLFTSM 179
Query: 394 QMFNCRISGKIPQVISXXXXXXXXXXXXXXXXXSIPVTFSRLLNLQGLGLAFNKLARSIP 453
+ R++GKIP + + V F N Q + LA N LA +
Sbjct: 180 TISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDA-SVLFGSDKNTQKIHLAKNSLAFDL- 237
Query: 454 DEICHLAKLDKLILHGNKFSGAIPSCSGNLTSLRALYLGSNRFTSALPSTIWNLKDILFF 513
++ L+ L L N+ G +P L L +L + N +P ++ F
Sbjct: 238 GKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG----GNLQRF 293
Query: 514 DVSS 517
DVS+
Sbjct: 294 DVSA 297
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 50/122 (40%), Gaps = 23/122 (18%)
Query: 542 NNLSGDIPITIGGLKNLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNKISGVIPTXXX 601
NNL G IP I L L L++ + + G IP+ S + +L LD S N +SG +P
Sbjct: 87 NNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLP---- 142
Query: 602 XXXXXXXXXXXXXXXXGEIPRGGPFANLTAKSFLGNELLCGLPDLHNSPCKLNKPKTHHK 661
P NL +F GN + +PD + S KL T +
Sbjct: 143 -------------------PSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISR 183
Query: 662 SR 663
+R
Sbjct: 184 NR 185
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 104/224 (46%), Gaps = 23/224 (10%)
Query: 716 FSYHELLQATDRFSKN------NLLGIGSFGSVYVARLQDGMEVAVKVFHQRY----ERA 765
FS++EL T+ F + N G G FG VY + + VAVK E
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 64
Query: 766 LKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRL--YSGTCMLDIF 823
+ F E +V + +H NLV+++ S+ D L+ Y PNGSL +RL GT L
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWH 124
Query: 824 QRLNIMIDVALALEYLHFGH-------STPII--HYMVAHISDFSIAKFLNGQDQLSMQT 874
R I A + +LH H S I+ A ISDF +A+ Q +
Sbjct: 125 XRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXS 184
Query: 875 QTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDE 918
+ + T Y APE ++G ++ + D+YS+G++L+E TG DE
Sbjct: 185 RIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDE 227
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 85.5 bits (210), Expect = 1e-16, Method: Composition-based stats.
Identities = 62/212 (29%), Positives = 101/212 (47%), Gaps = 30/212 (14%)
Query: 734 LGIGSFGSVYVARL------QDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKI 787
LG G+FG V++A QD M VAVK + E A + FQ E E++ ++H+++V+
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 788 ISACSNDDFKALIMEYMPNGSLENRLYS--------------GTCMLDIFQRLNIMIDVA 833
C+ ++ EYM +G L L S L + Q L + VA
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 834 LALEY---LHFGH------STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMA 884
+ Y LHF H + + +V I DF +++ + D + +T+ I +M
Sbjct: 146 AGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMP 205
Query: 885 PEYGVQGRVSTRGDVYSYGIMLMETFT-GKKP 915
PE + + +T DV+S+G++L E FT GK+P
Sbjct: 206 PESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 85.5 bits (210), Expect = 1e-16, Method: Composition-based stats.
Identities = 62/212 (29%), Positives = 101/212 (47%), Gaps = 30/212 (14%)
Query: 734 LGIGSFGSVYVARL------QDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKI 787
LG G+FG V++A QD M VAVK + E A + FQ E E++ ++H+++V+
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 788 ISACSNDDFKALIMEYMPNGSLENRLYS--------------GTCMLDIFQRLNIMIDVA 833
C+ ++ EYM +G L L S L + Q L + VA
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 834 LALEY---LHFGH------STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMA 884
+ Y LHF H + + +V I DF +++ + D + +T+ I +M
Sbjct: 140 AGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMP 199
Query: 885 PEYGVQGRVSTRGDVYSYGIMLMETFT-GKKP 915
PE + + +T DV+S+G++L E FT GK+P
Sbjct: 200 PESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 85.5 bits (210), Expect = 1e-16, Method: Composition-based stats.
Identities = 62/212 (29%), Positives = 101/212 (47%), Gaps = 30/212 (14%)
Query: 734 LGIGSFGSVYVARL------QDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKI 787
LG G+FG V++A QD M VAVK + E A + FQ E E++ ++H+++V+
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 788 ISACSNDDFKALIMEYMPNGSLENRLYS--------------GTCMLDIFQRLNIMIDVA 833
C+ ++ EYM +G L L S L + Q L + VA
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 834 LALEY---LHFGH------STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMA 884
+ Y LHF H + + +V I DF +++ + D + +T+ I +M
Sbjct: 169 AGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMP 228
Query: 885 PEYGVQGRVSTRGDVYSYGIMLMETFT-GKKP 915
PE + + +T DV+S+G++L E FT GK+P
Sbjct: 229 PESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 101/199 (50%), Gaps = 22/199 (11%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQR--YERALKSFQDECEVMKRIRHRNLVKIISAC 791
+G GSFG+V+ A G +VAVK+ ++ + + F E +MKR+RH N+V + A
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 792 SNDDFKALIMEYMPNGSLENRLYSGTC--MLDIFQRLNIMIDVALALEYLHFGHSTPIIH 849
+ +++ EY+ GSL L+ LD +RL++ DVA + YLH + PI+H
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVH 162
Query: 850 -------------YMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTR 896
Y V + DF +++ L LS ++ T +MAPE + +
Sbjct: 163 RNLKSPNLLVDKKYTVK-VCDFGLSR-LKASTFLSSKSAA-GTPEWMAPEVLRDEPSNEK 219
Query: 897 GDVYSYGIMLMETFTGKKP 915
DVYS+G++L E T ++P
Sbjct: 220 SDVYSFGVILWELATLQQP 238
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 101/214 (47%), Gaps = 24/214 (11%)
Query: 719 HELLQATDRFSKN-NLLGIGSFGSVYVAR---LQD--GMEVAVKVFHQRYERALKSFQDE 772
H + Q +R K LG G+FGSV + R LQD G VAVK E L+ F+ E
Sbjct: 20 HNMTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 79
Query: 773 CEVMKRIRHRNLVKIISACSNDDFK--ALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMI 830
E++K ++H N+VK C + + LIMEY+P GSL + L +D + L
Sbjct: 80 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 139
Query: 831 DVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFL-NGQDQLSMQTQTL 877
+ +EYL + IH +A I DF + K L ++ ++
Sbjct: 140 QICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 196
Query: 878 ATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT 911
+ I + APE + + S DV+S+G++L E FT
Sbjct: 197 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 95/198 (47%), Gaps = 23/198 (11%)
Query: 734 LGIGSFGSVYVAR---LQD--GMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKII 788
LG G+FGSV + R LQD G VAVK E L+ F+ E E++K ++H N+VK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 789 SACSNDDFK--ALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTP 846
C + + LIMEY+P GSL + L +D + L + +EYL +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 134
Query: 847 IIHYMVA------------HISDFSIAKFL-NGQDQLSMQTQTLATIGYMAPEYGVQGRV 893
IH +A I DF + K L ++ ++ + I + APE + +
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 194
Query: 894 STRGDVYSYGIMLMETFT 911
S DV+S+G++L E FT
Sbjct: 195 SVASDVWSFGVVLYELFT 212
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 83.2 bits (204), Expect = 7e-16, Method: Composition-based stats.
Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 31/213 (14%)
Query: 734 LGIGSFGSVYVAR------LQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKI 787
LG G+FG V++A +D M VAVK A K FQ E E++ ++H ++VK
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 788 ISACSNDDFKALIMEYMPNGSLEN--RLYSGTCM-------------LDIFQRLNIMIDV 832
C + D ++ EYM +G L R + M L + Q L+I +
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 833 ALALEYL---HFGH------STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYM 883
A + YL HF H + + ++ I DF +++ + D + T+ I +M
Sbjct: 143 ASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWM 202
Query: 884 APEYGVQGRVSTRGDVYSYGIMLMETFT-GKKP 915
PE + + +T DV+S+G++L E FT GK+P
Sbjct: 203 PPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 95/198 (47%), Gaps = 23/198 (11%)
Query: 734 LGIGSFGSVYVAR---LQD--GMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKII 788
LG G+FGSV + R LQD G VAVK E L+ F+ E E++K ++H N+VK
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 789 SACSNDDFK--ALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTP 846
C + + LIMEY+P GSL + L +D + L + +EYL +
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 141
Query: 847 IIHYMVA------------HISDFSIAKFL-NGQDQLSMQTQTLATIGYMAPEYGVQGRV 893
IH +A I DF + K L ++ ++ + I + APE + +
Sbjct: 142 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 201
Query: 894 STRGDVYSYGIMLMETFT 911
S DV+S+G++L E FT
Sbjct: 202 SVASDVWSFGVVLYELFT 219
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 95/198 (47%), Gaps = 23/198 (11%)
Query: 734 LGIGSFGSVYVAR---LQD--GMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKII 788
LG G+FGSV + R LQD G VAVK E L+ F+ E E++K ++H N+VK
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 789 SACSNDDFK--ALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTP 846
C + + LIMEY+P GSL + L +D + L + +EYL +
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 165
Query: 847 IIHYMVA------------HISDFSIAKFL-NGQDQLSMQTQTLATIGYMAPEYGVQGRV 893
IH +A I DF + K L ++ ++ + I + APE + +
Sbjct: 166 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 225
Query: 894 STRGDVYSYGIMLMETFT 911
S DV+S+G++L E FT
Sbjct: 226 SVASDVWSFGVVLYELFT 243
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 82.8 bits (203), Expect = 1e-15, Method: Composition-based stats.
Identities = 67/214 (31%), Positives = 101/214 (47%), Gaps = 24/214 (11%)
Query: 719 HELLQATDRFSKN-NLLGIGSFGSVYVAR---LQD--GMEVAVKVFHQRYERALKSFQDE 772
H + Q +R K LG G+FGSV + R LQD G VAVK E L+ F+ E
Sbjct: 20 HNMTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 79
Query: 773 CEVMKRIRHRNLVKIISACSNDDFK--ALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMI 830
E++K ++H N+VK C + + LIMEY+P GSL + L +D + L
Sbjct: 80 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 139
Query: 831 DVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFL-NGQDQLSMQTQTL 877
+ +EYL + IH +A I DF + K L ++ ++
Sbjct: 140 QICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 196
Query: 878 ATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT 911
+ I + APE + + S DV+S+G++L E FT
Sbjct: 197 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 82.4 bits (202), Expect = 1e-15, Method: Composition-based stats.
Identities = 63/198 (31%), Positives = 96/198 (48%), Gaps = 23/198 (11%)
Query: 734 LGIGSFGSVYVAR---LQD--GMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKII 788
LG G+FGSV + R LQD G VAVK E L+ F+ E E++K ++H N+VK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 789 SACSNDDFK--ALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTP 846
C + + LIMEY+P GSL + L + +D + L + +EYL +
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYL---GTKR 137
Query: 847 IIHYMVA------------HISDFSIAKFL-NGQDQLSMQTQTLATIGYMAPEYGVQGRV 893
IH +A I DF + K L ++ ++ + I + APE + +
Sbjct: 138 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 197
Query: 894 STRGDVYSYGIMLMETFT 911
S DV+S+G++L E FT
Sbjct: 198 SVASDVWSFGVVLYELFT 215
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 96/199 (48%), Gaps = 22/199 (11%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQR--YERALKSFQDECEVMKRIRHRNLVKIISAC 791
+G GSFG+V+ A G +VAVK+ ++ + + F E +MKR+RH N+V + A
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 792 SNDDFKALIMEYMPNGSLENRLYSGTC--MLDIFQRLNIMIDVALALEYLHFGHSTPIIH 849
+ +++ EY+ GSL L+ LD +RL++ DVA + YLH + PI+H
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVH 162
Query: 850 -------------YMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTR 896
Y V + DF +++ T +MAPE + +
Sbjct: 163 RDLKSPNLLVDKKYTVK-VCDFGLSRL--KASXFLXSKXAAGTPEWMAPEVLRDEPSNEK 219
Query: 897 GDVYSYGIMLMETFTGKKP 915
DVYS+G++L E T ++P
Sbjct: 220 SDVYSFGVILWELATLQQP 238
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 95/198 (47%), Gaps = 23/198 (11%)
Query: 734 LGIGSFGSVYVAR---LQD--GMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKII 788
LG G+FGSV + R LQD G VAVK E L+ F+ E E++K ++H N+VK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 789 SACSNDDFK--ALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTP 846
C + + LIMEY+P GSL + L +D + L + +EYL +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 134
Query: 847 IIHYMVA------------HISDFSIAKFL-NGQDQLSMQTQTLATIGYMAPEYGVQGRV 893
IH +A I DF + K L ++ ++ + I + APE + +
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKF 194
Query: 894 STRGDVYSYGIMLMETFT 911
S DV+S+G++L E FT
Sbjct: 195 SVASDVWSFGVVLYELFT 212
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 81.6 bits (200), Expect = 2e-15, Method: Composition-based stats.
Identities = 63/198 (31%), Positives = 95/198 (47%), Gaps = 23/198 (11%)
Query: 734 LGIGSFGSVYVAR---LQD--GMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKII 788
LG G+FGSV + R LQD G VAVK E L+ F+ E E++K ++H N+VK
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 789 SACSNDDFK--ALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTP 846
C + + LIMEY+P GSL + L +D + L + +EYL +
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 135
Query: 847 IIHYMVA------------HISDFSIAKFL-NGQDQLSMQTQTLATIGYMAPEYGVQGRV 893
IH +A I DF + K L ++ ++ + I + APE + +
Sbjct: 136 YIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKF 195
Query: 894 STRGDVYSYGIMLMETFT 911
S DV+S+G++L E FT
Sbjct: 196 SVASDVWSFGVVLYELFT 213
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 81.6 bits (200), Expect = 2e-15, Method: Composition-based stats.
Identities = 63/198 (31%), Positives = 95/198 (47%), Gaps = 23/198 (11%)
Query: 734 LGIGSFGSVYVAR---LQD--GMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKII 788
LG G+FGSV + R LQD G VAVK E L+ F+ E E++K ++H N+VK
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 789 SACSNDDFK--ALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTP 846
C + + LIMEY+P GSL + L +D + L + +EYL +
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 132
Query: 847 IIHYMVA------------HISDFSIAKFL-NGQDQLSMQTQTLATIGYMAPEYGVQGRV 893
IH +A I DF + K L ++ ++ + I + APE + +
Sbjct: 133 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 192
Query: 894 STRGDVYSYGIMLMETFT 911
S DV+S+G++L E FT
Sbjct: 193 SVASDVWSFGVVLYELFT 210
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 81.6 bits (200), Expect = 2e-15, Method: Composition-based stats.
Identities = 63/198 (31%), Positives = 95/198 (47%), Gaps = 23/198 (11%)
Query: 734 LGIGSFGSVYVAR---LQD--GMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKII 788
LG G+FGSV + R LQD G VAVK E L+ F+ E E++K ++H N+VK
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 789 SACSNDDFK--ALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTP 846
C + + LIMEY+P GSL + L +D + L + +EYL +
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 138
Query: 847 IIHYMVA------------HISDFSIAKFL-NGQDQLSMQTQTLATIGYMAPEYGVQGRV 893
IH +A I DF + K L ++ ++ + I + APE + +
Sbjct: 139 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 198
Query: 894 STRGDVYSYGIMLMETFT 911
S DV+S+G++L E FT
Sbjct: 199 SVASDVWSFGVVLYELFT 216
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 81.6 bits (200), Expect = 2e-15, Method: Composition-based stats.
Identities = 63/198 (31%), Positives = 95/198 (47%), Gaps = 23/198 (11%)
Query: 734 LGIGSFGSVYVAR---LQD--GMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKII 788
LG G+FGSV + R LQD G VAVK E L+ F+ E E++K ++H N+VK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 789 SACSNDDFK--ALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTP 846
C + + LIMEY+P GSL + L +D + L + +EYL +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 134
Query: 847 IIHYMVA------------HISDFSIAKFL-NGQDQLSMQTQTLATIGYMAPEYGVQGRV 893
IH +A I DF + K L ++ ++ + I + APE + +
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 194
Query: 894 STRGDVYSYGIMLMETFT 911
S DV+S+G++L E FT
Sbjct: 195 SVASDVWSFGVVLYELFT 212
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 81.6 bits (200), Expect = 2e-15, Method: Composition-based stats.
Identities = 63/198 (31%), Positives = 95/198 (47%), Gaps = 23/198 (11%)
Query: 734 LGIGSFGSVYVAR---LQD--GMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKII 788
LG G+FGSV + R LQD G VAVK E L+ F+ E E++K ++H N+VK
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 789 SACSNDDFK--ALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTP 846
C + + LIMEY+P GSL + L +D + L + +EYL +
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 133
Query: 847 IIHYMVA------------HISDFSIAKFL-NGQDQLSMQTQTLATIGYMAPEYGVQGRV 893
IH +A I DF + K L ++ ++ + I + APE + +
Sbjct: 134 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 193
Query: 894 STRGDVYSYGIMLMETFT 911
S DV+S+G++L E FT
Sbjct: 194 SVASDVWSFGVVLYELFT 211
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 81.6 bits (200), Expect = 2e-15, Method: Composition-based stats.
Identities = 63/198 (31%), Positives = 95/198 (47%), Gaps = 23/198 (11%)
Query: 734 LGIGSFGSVYVAR---LQD--GMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKII 788
LG G+FGSV + R LQD G VAVK E L+ F+ E E++K ++H N+VK
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 789 SACSNDDFK--ALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTP 846
C + + LIMEY+P GSL + L +D + L + +EYL +
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 139
Query: 847 IIHYMVA------------HISDFSIAKFL-NGQDQLSMQTQTLATIGYMAPEYGVQGRV 893
IH +A I DF + K L ++ ++ + I + APE + +
Sbjct: 140 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 199
Query: 894 STRGDVYSYGIMLMETFT 911
S DV+S+G++L E FT
Sbjct: 200 SVASDVWSFGVVLYELFT 217
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 81.6 bits (200), Expect = 2e-15, Method: Composition-based stats.
Identities = 63/198 (31%), Positives = 95/198 (47%), Gaps = 23/198 (11%)
Query: 734 LGIGSFGSVYVAR---LQD--GMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKII 788
LG G+FGSV + R LQD G VAVK E L+ F+ E E++K ++H N+VK
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 789 SACSNDDFK--ALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTP 846
C + + LIMEY+P GSL + L +D + L + +EYL +
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 140
Query: 847 IIHYMVA------------HISDFSIAKFL-NGQDQLSMQTQTLATIGYMAPEYGVQGRV 893
IH +A I DF + K L ++ ++ + I + APE + +
Sbjct: 141 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 200
Query: 894 STRGDVYSYGIMLMETFT 911
S DV+S+G++L E FT
Sbjct: 201 SVASDVWSFGVVLYELFT 218
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 81.6 bits (200), Expect = 2e-15, Method: Composition-based stats.
Identities = 63/198 (31%), Positives = 95/198 (47%), Gaps = 23/198 (11%)
Query: 734 LGIGSFGSVYVAR---LQD--GMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKII 788
LG G+FGSV + R LQD G VAVK E L+ F+ E E++K ++H N+VK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 789 SACSNDDFK--ALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTP 846
C + + LIMEY+P GSL + L +D + L + +EYL +
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 137
Query: 847 IIHYMVA------------HISDFSIAKFL-NGQDQLSMQTQTLATIGYMAPEYGVQGRV 893
IH +A I DF + K L ++ ++ + I + APE + +
Sbjct: 138 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 197
Query: 894 STRGDVYSYGIMLMETFT 911
S DV+S+G++L E FT
Sbjct: 198 SVASDVWSFGVVLYELFT 215
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 79.7 bits (195), Expect = 8e-15, Method: Composition-based stats.
Identities = 61/210 (29%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 734 LGIGSFGSVYVARL------QDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKI 787
LG G+FG V++A QD + VAVK + A K F E E++ ++H ++VK
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 788 ISACSNDDFKALIMEYMPNGSLENRLYS----GTCM--------LDIFQRLNIMIDVALA 835
C D ++ EYM +G L L + M L Q L+I +A
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 836 LEYL---HFGH------STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPE 886
+ YL HF H + + ++ I DF +++ + D + T+ I +M PE
Sbjct: 141 MVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPE 200
Query: 887 YGVQGRVSTRGDVYSYGIMLMETFT-GKKP 915
+ + +T DV+S G++L E FT GK+P
Sbjct: 201 SIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 79.7 bits (195), Expect = 8e-15, Method: Composition-based stats.
Identities = 62/198 (31%), Positives = 94/198 (47%), Gaps = 23/198 (11%)
Query: 734 LGIGSFGSVYVAR---LQD--GMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKII 788
LG G+FGSV + R LQD G VAVK E L+ F+ E E++K ++H N+VK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 789 SACSNDDFK--ALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTP 846
C + + LIME++P GSL L +D + L + +EYL +
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 137
Query: 847 IIHYMVA------------HISDFSIAKFL-NGQDQLSMQTQTLATIGYMAPEYGVQGRV 893
IH +A I DF + K L ++ ++ + I + APE + +
Sbjct: 138 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 197
Query: 894 STRGDVYSYGIMLMETFT 911
S DV+S+G++L E FT
Sbjct: 198 SVASDVWSFGVVLYELFT 215
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 78.2 bits (191), Expect = 2e-14, Method: Composition-based stats.
Identities = 63/198 (31%), Positives = 93/198 (46%), Gaps = 17/198 (8%)
Query: 733 LLGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACS 792
++G G+FG V A+ + +VA+K ER K+F E + R+ H N+VK+ AC
Sbjct: 16 VVGRGAFGVVCKAKWR-AKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACL 72
Query: 793 NDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIM---IDVALALEYLHFGHSTPIIH 849
N L+MEY GSL N L+ G L + + M + + + YLH +IH
Sbjct: 73 NP--VCLVMEYAEGGSLYNVLH-GAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIH 129
Query: 850 --------YMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYS 901
+VA + I F D + T + +MAPE S + DV+S
Sbjct: 130 RDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFS 189
Query: 902 YGIMLMETFTGKKPTDEI 919
+GI+L E T +KP DEI
Sbjct: 190 WGIILWEVITRRKPFDEI 207
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 78.2 bits (191), Expect = 2e-14, Method: Composition-based stats.
Identities = 63/198 (31%), Positives = 93/198 (46%), Gaps = 17/198 (8%)
Query: 733 LLGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACS 792
++G G+FG V A+ + +VA+K ER K+F E + R+ H N+VK+ AC
Sbjct: 15 VVGRGAFGVVCKAKWR-AKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACL 71
Query: 793 NDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIM---IDVALALEYLHFGHSTPIIH 849
N L+MEY GSL N L+ G L + + M + + + YLH +IH
Sbjct: 72 NP--VCLVMEYAEGGSLYNVLH-GAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIH 128
Query: 850 --------YMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYS 901
+VA + I F D + T + +MAPE S + DV+S
Sbjct: 129 RDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFS 188
Query: 902 YGIMLMETFTGKKPTDEI 919
+GI+L E T +KP DEI
Sbjct: 189 WGIILWEVITRRKPFDEI 206
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 731 NNLLGIGSFGSVYVARLQDGMEVAVKVFH----QRYERALKSFQDECEVMKRIRHRNLVK 786
++GIG FG VY A G EVAVK + + +++ + E ++ ++H N++
Sbjct: 12 EEIIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIA 70
Query: 787 IISACSNDDFKALIMEYMPNGSLENRLYSGTCML-DIFQRLNIMIDVALALEYLHFGHST 845
+ C + L+ME+ G L NR+ SG + DI +N + +A + YLH
Sbjct: 71 LRGVCLKEPNLCLVMEFARGGPL-NRVLSGKRIPPDIL--VNWAVQIARGMNYLHDEAIV 127
Query: 846 PIIHY--------------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAP 885
PIIH + I+DF +A+ + ++S +MAP
Sbjct: 128 PIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMS----AAGAYAWMAP 183
Query: 886 EYGVQGRVSTRGDVYSYGIMLMETFTGKKP 915
E S DV+SYG++L E TG+ P
Sbjct: 184 EVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 99/230 (43%), Gaps = 35/230 (15%)
Query: 724 ATDRFSKNNLLGIGSFGSVYVARL-QDGMEVAVKVF-------HQRYERALKSFQDECEV 775
A + +G G FG V+ RL +D VA+K + FQ E +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 776 MKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALA 835
M + H N+VK+ N ++ME++P G L +RL + +L +M+D+AL
Sbjct: 77 MSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 836 LEYLHFGHSTPIIHY-----------------MVAHISDFSIAKFLNGQDQLSMQTQTLA 878
+EY+ + PI+H + A ++DFS++ Q + + L
Sbjct: 135 IEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS-----QQSVHSVSGLLG 188
Query: 879 TIGYMAPEY--GVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSL 926
+MAPE + + + D YS+ ++L TG+ P DE G++
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKF 238
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 103/227 (45%), Gaps = 24/227 (10%)
Query: 710 PQAIRRFSYHELLQATDRFSKNNLLGIGSFGSVYVARLQDGMEVAVKVFH--QRYERALK 767
P+ R SY+ ++A++ + G GSFG+VY + +VAVK+ +
Sbjct: 21 PRGQRDSSYYWEIEASEVMLSTRI-GSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQ 77
Query: 768 SFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLN 827
+F++E V+++ RH N++ + + D+ A++ ++ SL L+ +FQ ++
Sbjct: 78 AFRNEVAVLRKTRHVNILLFMGYMTKDNL-AIVTQWCEGSSLYKHLHVQETKFQMFQLID 136
Query: 828 IMIDVALALEYLHFGHSTPIIHY------------MVAHISDFSIAKFLNGQDQLSMQTQ 875
I A ++YL H+ IIH + I DF +A + Q
Sbjct: 137 IARQTAQGMDYL---HAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQ 193
Query: 876 TLATIGYMAPEY---GVQGRVSTRGDVYSYGIMLMETFTGKKPTDEI 919
++ +MAPE S + DVYSYGI+L E TG+ P I
Sbjct: 194 PTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHI 240
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 96/225 (42%), Gaps = 25/225 (11%)
Query: 724 ATDRFSKNNLLGIGSFGSVYVARL-QDGMEVAVKVF-------HQRYERALKSFQDECEV 775
A + +G G FG V+ RL +D VA+K + FQ E +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 776 MKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALA 835
M + H N+VK+ N ++ME++P G L +RL + +L +M+D+AL
Sbjct: 77 MSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 836 LEYLHFGHSTPIIHYMVAHISDF------------SIAKFLNGQDQLSMQTQTLATIGYM 883
+EY+ + PI+H + + F +A F Q + + L +M
Sbjct: 135 IEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGNFQWM 193
Query: 884 APEY--GVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSL 926
APE + + + D YS+ ++L TG+ P DE G++
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKF 238
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 105/221 (47%), Gaps = 26/221 (11%)
Query: 720 ELLQATDRFSKNN---LLGIGSFGSVYVAR-LQDGMEVAVKVFHQRYERALKSFQDECEV 775
+LL+ + +N +LG G++G VY R L + + +A+K +R R + +E +
Sbjct: 13 DLLEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIAL 72
Query: 776 MKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALA 835
K ++H+N+V+ + + S + F + ME +P GSL L S L ++ I
Sbjct: 73 HKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQ-TIGFYTKQI 131
Query: 836 LEYLHFGHSTPIIHYMVA-------------HISDFSIAKFLNGQDQLSMQTQTL-ATIG 881
LE L + H I+H + ISDF +K L G ++ T+T T+
Sbjct: 132 LEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG---INPCTETFTGTLQ 188
Query: 882 YMAPE---YGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEI 919
YMAPE G +G D++S G ++E TGK P E+
Sbjct: 189 YMAPEIIDKGPRG-YGKAADIWSLGCTIIEMATGKPPFYEL 228
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 98/230 (42%), Gaps = 35/230 (15%)
Query: 724 ATDRFSKNNLLGIGSFGSVYVARL-QDGMEVAVKVF-------HQRYERALKSFQDECEV 775
A + +G G FG V+ RL +D VA+K + FQ E +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 776 MKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALA 835
M + H N+VK+ N ++ME++P G L +RL + +L +M+D+AL
Sbjct: 77 MSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 836 LEYLHFGHSTPIIHY-----------------MVAHISDFSIAKFLNGQDQLSMQTQTLA 878
+EY+ + PI+H + A ++DF ++ Q + + L
Sbjct: 135 IEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS-----QQSVHSVSGLLG 188
Query: 879 TIGYMAPEY--GVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSL 926
+MAPE + + + D YS+ ++L TG+ P DE G++
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKF 238
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 101/219 (46%), Gaps = 18/219 (8%)
Query: 719 HELLQATD--RFSKNNLLGIGSFGSVYVARLQ----DGMEVAVKVFHQRY-ERALKSFQD 771
HE + D S + ++G G FG V RL+ + VA+K Y E+ + F
Sbjct: 36 HEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 772 ECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMID 831
E +M + H N++++ + ++ EYM NGSL++ L + Q + ++
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 832 VALALEYLH---------FGHSTPIIHYMVAHISDFSIAKFLNGQDQLSMQTQ-TLATIG 881
+A ++YL + I +V +SDF +A+ L + + T+ I
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIR 215
Query: 882 YMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEI 919
+ +PE + ++ DV+SYGI+L E + G++P E+
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM 254
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 73.2 bits (178), Expect = 8e-13, Method: Composition-based stats.
Identities = 58/197 (29%), Positives = 93/197 (47%), Gaps = 18/197 (9%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
LG G FG V + + + +VAVK+ + + FQ E + M ++ H LVK CS
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQ-EAQTMMKLSHPKLVKFYGVCSK 74
Query: 794 DDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA 853
+ ++ EY+ NG L N L S L+ Q L + DV + +L S IH +A
Sbjct: 75 EYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFL---ESHQFIHRDLA 131
Query: 854 ------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYS 901
+SDF + +++ DQ T + + APE + S++ DV++
Sbjct: 132 ARNCLVDRDLCVKVSDFGMTRYVL-DDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWA 190
Query: 902 YGIMLMETFT-GKKPTD 917
+GI++ E F+ GK P D
Sbjct: 191 FGILMWEVFSLGKMPYD 207
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 73.2 bits (178), Expect = 8e-13, Method: Composition-based stats.
Identities = 54/196 (27%), Positives = 97/196 (49%), Gaps = 20/196 (10%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
LG G FG V++ VA+K + + ++F E +VMK++RH LV++ + S
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 74
Query: 794 DDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALAL-------EYLHFGH--- 843
+ ++ EYM GSL + L T + RL ++D+A + E +++ H
Sbjct: 75 EPI-XIVTEYMSKGSLLDFLKGETGK---YLRLPQLVDMAAQIASGMAYVERMNYVHRDL 130
Query: 844 ---STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVY 900
+ + +V ++DF +A+ + + + Q I + APE + GR + + DV+
Sbjct: 131 RAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFP-IKWTAPEAALYGRFTIKSDVW 189
Query: 901 SYGIMLME-TFTGKKP 915
S+GI+L E T G+ P
Sbjct: 190 SFGILLTELTTKGRVP 205
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 103/219 (47%), Gaps = 18/219 (8%)
Query: 719 HELLQATD--RFSKNNLLGIGSFGSVYVARLQ----DGMEVAVKVFHQRY-ERALKSFQD 771
HE + D S + ++G G FG V RL+ + VA+K Y E+ + F
Sbjct: 36 HEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 772 ECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMID 831
E +M + H N++++ + ++ EYM NGSL++ L + Q + ++
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 832 VALALEYLH---FGH------STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQ-TLATIG 881
+A ++YL F H + I +V +SDF +++ L + + T+ I
Sbjct: 156 IASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 882 YMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEI 919
+ +PE + ++ DV+SYGI+L E + G++P E+
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM 254
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 72.8 bits (177), Expect = 1e-12, Method: Composition-based stats.
Identities = 54/193 (27%), Positives = 100/193 (51%), Gaps = 14/193 (7%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
LG G FG V++ +VA+K + + +SF +E ++MK+++H LV++ + S
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTL-KPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSE 75
Query: 794 DDFKALIMEYMPNGSLENRLYSGTC-MLDIFQRLNIMIDVALALEY---LHFGH----ST 845
+ ++ EYM GSL + L G L + +++ VA + Y +++ H S
Sbjct: 76 EPI-YIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSA 134
Query: 846 PII--HYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYG 903
I+ + ++ I+DF +A+ + + + Q I + APE + GR + + DV+S+G
Sbjct: 135 NILVGNGLICKIADFGLARLIEDNEXTARQGAKFP-IKWTAPEAALYGRFTIKSDVWSFG 193
Query: 904 IMLMETFT-GKKP 915
I+L E T G+ P
Sbjct: 194 ILLTELVTKGRVP 206
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 106/227 (46%), Gaps = 19/227 (8%)
Query: 709 SPQAIRRFSYHELLQATDRFSKNNLLGIGSFGSVYVARLQ----DGMEVAVKVFHQRY-E 763
S Q + F+ L AT+ S + ++G G FG V RL+ + VA+K Y E
Sbjct: 19 STQTVHEFAKE--LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE 75
Query: 764 RALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIF 823
+ + F E +M + H N++++ + ++ EYM NGSL++ L +
Sbjct: 76 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 135
Query: 824 QRLNIMIDVALALEYLH---------FGHSTPIIHYMVAHISDFSIAKFLNGQDQLSMQT 874
Q + ++ +A ++YL + I +V +SDF +++ L + + T
Sbjct: 136 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 195
Query: 875 Q-TLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEI 919
+ I + +PE + ++ DV+SYGI+L E + G++P E+
Sbjct: 196 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM 242
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 72.4 bits (176), Expect = 1e-12, Method: Composition-based stats.
Identities = 54/203 (26%), Positives = 97/203 (47%), Gaps = 34/203 (16%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
LG G FG V++ VA+K + + ++F E +VMK++RH LV++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 794 DDFKALIMEYMPNGSLENRLYSGTCMLDIFQ-------RLNIMIDVALAL-------EYL 839
+ ++MEYM G C+LD + RL ++D+A + E +
Sbjct: 85 EPI-YIVMEYMSKG----------CLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 840 HFGH------STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRV 893
++ H + + +V ++DF +A+ + + + Q I + APE + GR
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRF 192
Query: 894 STRGDVYSYGIMLME-TFTGKKP 915
+ + DV+S+GI+L E T G+ P
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVP 215
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 106/227 (46%), Gaps = 19/227 (8%)
Query: 709 SPQAIRRFSYHELLQATDRFSKNNLLGIGSFGSVYVARLQ----DGMEVAVKVFHQRY-E 763
S Q + F+ L AT+ S + ++G G FG V RL+ + VA+K Y E
Sbjct: 2 STQTVHEFAKE--LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE 58
Query: 764 RALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIF 823
+ + F E +M + H N++++ + ++ EYM NGSL++ L +
Sbjct: 59 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 118
Query: 824 QRLNIMIDVALALEYLH---------FGHSTPIIHYMVAHISDFSIAKFLNGQDQLSMQT 874
Q + ++ +A ++YL + I +V +SDF +++ L + + T
Sbjct: 119 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 178
Query: 875 Q-TLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEI 919
+ I + +PE + ++ DV+SYGI+L E + G++P E+
Sbjct: 179 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM 225
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 98/205 (47%), Gaps = 23/205 (11%)
Query: 733 LLGIGSFGSVYVAR-LQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISAC 791
+LG G++G VY R L + + +A+K +R R + +E + K ++H+N+V+ + +
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 792 SNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHY- 850
S + F + ME +P GSL L S L ++ I LE L + H I+H
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQ-TIGFYTKQILEGLKYLHDNQIVHRD 133
Query: 851 ------------MVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPE---YGVQGRVS 894
V ISDF +K L G ++ T+T T+ YMAPE G +G
Sbjct: 134 IKGDNVLINTYSGVLKISDFGTSKRLAG---INPCTETFTGTLQYMAPEIIDKGPRG-YG 189
Query: 895 TRGDVYSYGIMLMETFTGKKPTDEI 919
D++S G ++E TGK P E+
Sbjct: 190 KAADIWSLGCTIIEMATGKPPFYEL 214
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 53/196 (27%), Positives = 98/196 (50%), Gaps = 20/196 (10%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
LG G FG V++ VA+K + + ++F E +VMK++RH LV++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 794 DDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALAL-------EYLHFGH--- 843
+ +++EYM GSL + L + + RL ++D+A + E +++ H
Sbjct: 85 EPI-YIVIEYMSKGSLLDFLKG---EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 844 ---STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVY 900
+ + +V ++DF +A+ + + + Q I + APE + GR + + DV+
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFP-IKWTAPEAALYGRFTIKSDVW 199
Query: 901 SYGIMLME-TFTGKKP 915
S+GI+L E T G+ P
Sbjct: 200 SFGILLTELTTKGRVP 215
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 54/196 (27%), Positives = 97/196 (49%), Gaps = 20/196 (10%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
LG G FG V++ VA+K + + ++F E +VMK++RH LV++ + S
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 77
Query: 794 DDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALAL-------EYLHFGH--- 843
+ ++ EYM GSL + L T + RL ++D+A + E +++ H
Sbjct: 78 EPI-YIVTEYMSKGSLLDFLKGETGK---YLRLPQLVDMAAQIASGMAYVERMNYVHRDL 133
Query: 844 ---STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVY 900
+ + +V ++DF +A+ + + + Q I + APE + GR + + DV+
Sbjct: 134 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVW 192
Query: 901 SYGIMLME-TFTGKKP 915
S+GI+L E T G+ P
Sbjct: 193 SFGILLTELTTKGRVP 208
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 54/196 (27%), Positives = 97/196 (49%), Gaps = 20/196 (10%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
LG G FG V++ VA+K + + ++F E +VMK+IRH LV++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSE 84
Query: 794 DDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALAL-------EYLHFGH--- 843
+ ++ EYM GSL + L + + RL ++D+A + E +++ H
Sbjct: 85 EPI-YIVTEYMSKGSLLDFLKG---EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 844 ---STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVY 900
+ + +V ++DF +A+ + + + Q I + APE + GR + + DV+
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVW 199
Query: 901 SYGIMLME-TFTGKKP 915
S+GI+L E T G+ P
Sbjct: 200 SFGILLTELTTKGRVP 215
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 96/196 (48%), Gaps = 20/196 (10%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
LG G FG V++ VA+K + + ++F E +VMK++RH LV++ + S
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 333
Query: 794 DDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALAL-------EYLHFGHSTP 846
+ ++ EYM GSL + L T + RL ++D+A + E +++ H
Sbjct: 334 EPI-YIVTEYMSKGSLLDFLKGETGK---YLRLPQLVDMAAQIASGMAYVERMNYVHRDL 389
Query: 847 ------IIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVY 900
+ +V ++DF +A+ + + + Q I + APE + GR + + DV+
Sbjct: 390 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVW 448
Query: 901 SYGIMLME-TFTGKKP 915
S+GI+L E T G+ P
Sbjct: 449 SFGILLTELTTKGRVP 464
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 72.0 bits (175), Expect = 2e-12, Method: Composition-based stats.
Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 18/195 (9%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
+G G FG V++ + +VA+K + + + F +E EVM ++ H LV++ C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 794 DDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHY--- 850
L+ E+M +G L + L + + L + +DV + YL +IH
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL---EEASVIHRDLA 130
Query: 851 ---------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYS 901
V +SDF + +F+ DQ + T T + + +PE R S++ DV+S
Sbjct: 131 ARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 189
Query: 902 YGIMLMETFT-GKKP 915
+G+++ E F+ GK P
Sbjct: 190 FGVLMWEVFSEGKIP 204
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 96/196 (48%), Gaps = 20/196 (10%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
LG G FG V++ VA+K + ++F E +VMK++RH LV++ + S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 794 DDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALAL-------EYLHFGH--- 843
+ ++ EYM GSL + L T + RL ++D+A + E +++ H
Sbjct: 251 EPI-YIVTEYMSKGSLLDFLKGET---GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 306
Query: 844 ---STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVY 900
+ + +V ++DF +A+ + + + Q I + APE + GR + + DV+
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVW 365
Query: 901 SYGIMLME-TFTGKKP 915
S+GI+L E T G+ P
Sbjct: 366 SFGILLTELTTKGRVP 381
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 101/219 (46%), Gaps = 18/219 (8%)
Query: 719 HELLQATD--RFSKNNLLGIGSFGSVYVARLQ----DGMEVAVKVFHQRY-ERALKSFQD 771
HE + D S + ++G G FG V RL+ + VA+K Y E+ + F
Sbjct: 36 HEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 772 ECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMID 831
E +M + H N++++ + ++ EYM NGSL++ L + Q + ++
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 832 VALALEYLH---------FGHSTPIIHYMVAHISDFSIAKFLNGQDQLSMQTQ-TLATIG 881
+A ++YL + I +V +SDF +++ L + + T+ I
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 882 YMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEI 919
+ +PE + ++ DV+SYGI+L E + G++P E+
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM 254
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 94/199 (47%), Gaps = 22/199 (11%)
Query: 734 LGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKS-FQDECEVMKRIRHRNLVKIISAC 791
+G G+FG V+ RL+ D VAVK + LK+ F E ++K+ H N+V++I C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 792 SNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYM 851
+ ++ME + G L + L + L ++ D A +EYL S IH
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYL---ESKCCIHRD 238
Query: 852 VA------------HISDFSIAKFLNGQDQLSMQTQTL--ATIGYMAPEYGVQGRVSTRG 897
+A ISDF +++ D + + L + + APE GR S+
Sbjct: 239 LAARNCLVTEKNVLKISDFGMSR--EEADGVXAASGGLRQVPVKWTAPEALNYGRYSSES 296
Query: 898 DVYSYGIMLMETFT-GKKP 915
DV+S+GI+L ETF+ G P
Sbjct: 297 DVWSFGILLWETFSLGASP 315
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 96/196 (48%), Gaps = 20/196 (10%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
LG G FG V++ VA+K + ++F E +VMK++RH LV++ + S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 794 DDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALAL-------EYLHFGH--- 843
+ ++ EYM GSL + L T + RL ++D+A + E +++ H
Sbjct: 251 EPI-YIVTEYMSKGSLLDFLKGET---GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 306
Query: 844 ---STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVY 900
+ + +V ++DF +A+ + + + Q I + APE + GR + + DV+
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVW 365
Query: 901 SYGIMLME-TFTGKKP 915
S+GI+L E T G+ P
Sbjct: 366 SFGILLTELTTKGRVP 381
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 71.6 bits (174), Expect = 2e-12, Method: Composition-based stats.
Identities = 53/196 (27%), Positives = 98/196 (50%), Gaps = 20/196 (10%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
LG G FG V++ VA+K + + ++F E +VMK++RH LV++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 794 DDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALAL-------EYLHFGH--- 843
+ +++EYM GSL + L + + RL ++D+A + E +++ H
Sbjct: 85 EPI-YIVIEYMSKGSLLDFLKG---EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 844 ---STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVY 900
+ + +V ++DF +A+ + + + Q I + APE + GR + + DV+
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVW 199
Query: 901 SYGIMLME-TFTGKKP 915
S+GI+L E T G+ P
Sbjct: 200 SFGILLTELTTKGRVP 215
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 101/219 (46%), Gaps = 18/219 (8%)
Query: 719 HELLQATD--RFSKNNLLGIGSFGSVYVARLQ----DGMEVAVKVFHQRY-ERALKSFQD 771
HE + D S + ++G G FG V RL+ + VA+K Y E+ + F
Sbjct: 36 HEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 772 ECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMID 831
E +M + H N++++ + ++ EYM NGSL++ L + Q + ++
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 832 VALALEYLH---------FGHSTPIIHYMVAHISDFSIAKFLNGQDQLSMQTQ-TLATIG 881
+A ++YL + I +V +SDF +++ L + + T+ I
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 882 YMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEI 919
+ +PE + ++ DV+SYGI+L E + G++P E+
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM 254
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 101/219 (46%), Gaps = 18/219 (8%)
Query: 719 HELLQATD--RFSKNNLLGIGSFGSVYVARLQ----DGMEVAVKVFHQRY-ERALKSFQD 771
HE + D S + ++G G FG V RL+ + VA+K Y E+ + F
Sbjct: 36 HEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 772 ECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMID 831
E +M + H N++++ + ++ EYM NGSL++ L + Q + ++
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 832 VALALEYLH---------FGHSTPIIHYMVAHISDFSIAKFLNGQDQLSMQTQ-TLATIG 881
+A ++YL + I +V +SDF +++ L + + T+ I
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 882 YMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEI 919
+ +PE + ++ DV+SYGI+L E + G++P E+
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM 254
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 100/219 (45%), Gaps = 18/219 (8%)
Query: 719 HELLQATD--RFSKNNLLGIGSFGSVYVARLQ----DGMEVAVKVFHQRY-ERALKSFQD 771
HE + D S + ++G G FG V RL+ + VA+K Y E+ + F
Sbjct: 36 HEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 772 ECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMID 831
E +M + H N++++ + ++ EYM NGSL++ L + Q + ++
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 832 VALALEYLH---------FGHSTPIIHYMVAHISDFSIAKFLNGQDQLSMQTQ-TLATIG 881
+A ++YL + I +V +SDF + + L + + T+ I
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIR 215
Query: 882 YMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEI 919
+ +PE + ++ DV+SYGI+L E + G++P E+
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM 254
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 101/219 (46%), Gaps = 18/219 (8%)
Query: 719 HELLQATD--RFSKNNLLGIGSFGSVYVARLQ----DGMEVAVKVFHQRY-ERALKSFQD 771
HE + D S + ++G G FG V RL+ + VA+K Y E+ + F
Sbjct: 36 HEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 772 ECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMID 831
E +M + H N++++ + ++ EYM NGSL++ L + Q + ++
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 832 VALALEYLH---------FGHSTPIIHYMVAHISDFSIAKFLNGQDQLSMQTQ-TLATIG 881
+A ++YL + I +V +SDF +++ L + + T+ I
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 882 YMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEI 919
+ +PE + ++ DV+SYGI+L E + G++P E+
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM 254
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 94/199 (47%), Gaps = 22/199 (11%)
Query: 734 LGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKS-FQDECEVMKRIRHRNLVKIISAC 791
+G G+FG V+ RL+ D VAVK + LK+ F E ++K+ H N+V++I C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 792 SNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYM 851
+ ++ME + G L + L + L ++ D A +EYL S IH
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYL---ESKCCIHRD 238
Query: 852 VA------------HISDFSIAKFLNGQDQLSMQTQTL--ATIGYMAPEYGVQGRVSTRG 897
+A ISDF +++ D + + L + + APE GR S+
Sbjct: 239 LAARNCLVTEKNVLKISDFGMSR--EEADGVYAASGGLRQVPVKWTAPEALNYGRYSSES 296
Query: 898 DVYSYGIMLMETFT-GKKP 915
DV+S+GI+L ETF+ G P
Sbjct: 297 DVWSFGILLWETFSLGASP 315
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 96/196 (48%), Gaps = 20/196 (10%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
LG G FG V++ VA+K + ++F E +VMK++RH LV++ + S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 794 DDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALAL-------EYLHFGH--- 843
+ ++ EYM GSL + L T + RL ++D+A + E +++ H
Sbjct: 251 EPI-YIVGEYMSKGSLLDFLKGET---GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 306
Query: 844 ---STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVY 900
+ + +V ++DF +A+ + + + Q I + APE + GR + + DV+
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVW 365
Query: 901 SYGIMLME-TFTGKKP 915
S+GI+L E T G+ P
Sbjct: 366 SFGILLTELTTKGRVP 381
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 71.2 bits (173), Expect = 3e-12, Method: Composition-based stats.
Identities = 54/196 (27%), Positives = 95/196 (48%), Gaps = 20/196 (10%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
LG G FG V++ VA+K + + ++F E +VMK++RH LV++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 794 DDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALA----------LEYLHFGH 843
+ ++ EYM GSL + L + + RL ++D+A + Y+H
Sbjct: 85 EPI-YIVTEYMSKGSLLDFLKG---EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 844 STPII---HYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVY 900
+ I +V ++DF +A+ + + + Q I + APE + GR + + DV+
Sbjct: 141 AAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVW 199
Query: 901 SYGIMLME-TFTGKKP 915
S+GI+L E T G+ P
Sbjct: 200 SFGILLTELTTKGRVP 215
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 101/219 (46%), Gaps = 18/219 (8%)
Query: 719 HELLQATD--RFSKNNLLGIGSFGSVYVARLQ----DGMEVAVKVFHQRY-ERALKSFQD 771
HE + D S + ++G G FG V RL+ + VA+K Y E+ + F
Sbjct: 34 HEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 93
Query: 772 ECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMID 831
E +M + H N++++ + ++ EYM NGSL++ L + Q + ++
Sbjct: 94 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG 153
Query: 832 VALALEYLH---------FGHSTPIIHYMVAHISDFSIAKFLNGQDQLSMQTQ-TLATIG 881
+A ++YL + I +V +SDF +++ L + + T+ I
Sbjct: 154 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 213
Query: 882 YMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEI 919
+ +PE + ++ DV+SYGI+L E + G++P E+
Sbjct: 214 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM 252
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 71.2 bits (173), Expect = 3e-12, Method: Composition-based stats.
Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 18/195 (9%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
+G G FG V++ + +VA+K + + + F +E EVM ++ H LV++ C
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 794 DDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHY--- 850
L+ E+M +G L + L + + L + +DV + YL +IH
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL---EEACVIHRDLA 128
Query: 851 ---------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYS 901
V +SDF + +F+ DQ + T T + + +PE R S++ DV+S
Sbjct: 129 ARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 187
Query: 902 YGIMLMETFT-GKKP 915
+G+++ E F+ GK P
Sbjct: 188 FGVLMWEVFSEGKIP 202
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 71.2 bits (173), Expect = 3e-12, Method: Composition-based stats.
Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 18/195 (9%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
+G G FG V++ + +VA+K + + + F +E EVM ++ H LV++ C
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 794 DDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHY--- 850
L+ E+M +G L + L + + L + +DV + YL +IH
Sbjct: 77 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL---EEACVIHRDLA 133
Query: 851 ---------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYS 901
V +SDF + +F+ DQ + T T + + +PE R S++ DV+S
Sbjct: 134 ARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 192
Query: 902 YGIMLMETFT-GKKP 915
+G+++ E F+ GK P
Sbjct: 193 FGVLMWEVFSEGKIP 207
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 71.2 bits (173), Expect = 3e-12, Method: Composition-based stats.
Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 18/195 (9%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
+G G FG V++ + +VA+K + + + F +E EVM ++ H LV++ C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 794 DDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHY--- 850
L+ E+M +G L + L + + L + +DV + YL +IH
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL---EEACVIHRDLA 130
Query: 851 ---------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYS 901
V +SDF + +F+ DQ + T T + + +PE R S++ DV+S
Sbjct: 131 ARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 189
Query: 902 YGIMLMETFT-GKKP 915
+G+++ E F+ GK P
Sbjct: 190 FGVLMWEVFSEGKIP 204
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 70.9 bits (172), Expect = 3e-12, Method: Composition-based stats.
Identities = 53/196 (27%), Positives = 97/196 (49%), Gaps = 20/196 (10%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
LG G FG V++ VA+K + + ++F E +VMK++RH LV++ + S
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 73
Query: 794 DDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALAL-------EYLHFGH--- 843
+ ++ EYM GSL + L + + RL ++D+A + E +++ H
Sbjct: 74 EPI-YIVTEYMSKGSLLDFLKG---EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 129
Query: 844 ---STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVY 900
+ + +V ++DF +A+ + + + Q I + APE + GR + + DV+
Sbjct: 130 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVW 188
Query: 901 SYGIMLME-TFTGKKP 915
S+GI+L E T G+ P
Sbjct: 189 SFGILLTELTTKGRVP 204
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 70.9 bits (172), Expect = 3e-12, Method: Composition-based stats.
Identities = 53/196 (27%), Positives = 97/196 (49%), Gaps = 20/196 (10%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
LG G FG V++ VA+K + + ++F E +VMK++RH LV++ + S
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 75
Query: 794 DDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALAL-------EYLHFGH--- 843
+ ++ EYM GSL + L + + RL ++D+A + E +++ H
Sbjct: 76 EPI-YIVTEYMSKGSLLDFLKG---EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 131
Query: 844 ---STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVY 900
+ + +V ++DF +A+ + + + Q I + APE + GR + + DV+
Sbjct: 132 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVW 190
Query: 901 SYGIMLME-TFTGKKP 915
S+GI+L E T G+ P
Sbjct: 191 SFGILLTELTTKGRVP 206
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 70.9 bits (172), Expect = 3e-12, Method: Composition-based stats.
Identities = 53/196 (27%), Positives = 97/196 (49%), Gaps = 20/196 (10%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
LG G FG V++ VA+K + + ++F E +VMK++RH LV++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 794 DDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALAL-------EYLHFGH--- 843
+ ++ EYM GSL + L + + RL ++D+A + E +++ H
Sbjct: 85 EPI-YIVTEYMSKGSLLDFLKG---EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 844 ---STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVY 900
+ + +V ++DF +A+ + + + Q I + APE + GR + + DV+
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVW 199
Query: 901 SYGIMLME-TFTGKKP 915
S+GI+L E T G+ P
Sbjct: 200 SFGILLTELTTKGRVP 215
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 70.9 bits (172), Expect = 3e-12, Method: Composition-based stats.
Identities = 53/193 (27%), Positives = 97/193 (50%), Gaps = 14/193 (7%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
LG G FG V++ VA+K + + ++F E +VMK++RH LV++ + S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 794 DDFKALIMEYMPNGSLENRLYSGTC-MLDIFQRLNIMIDVALALEY---LHFGH------ 843
+ ++ EYM GSL + L T L + Q +++ +A + Y +++ H
Sbjct: 82 EPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAA 140
Query: 844 STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYG 903
+ + +V ++DF +A+ + + + Q I + APE + GR + + DV+S+G
Sbjct: 141 NILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVWSFG 199
Query: 904 IMLME-TFTGKKP 915
I+L E T G+ P
Sbjct: 200 ILLTELTTKGRVP 212
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 70.9 bits (172), Expect = 3e-12, Method: Composition-based stats.
Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 18/195 (9%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
+G G FG V++ + +VA+K + + + F +E EVM ++ H LV++ C
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 794 DDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHY--- 850
L+ E+M +G L + L + + L + +DV + YL +IH
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL---EEACVIHRDLA 131
Query: 851 ---------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYS 901
V +SDF + +F+ DQ + T T + + +PE R S++ DV+S
Sbjct: 132 ARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 190
Query: 902 YGIMLMETFT-GKKP 915
+G+++ E F+ GK P
Sbjct: 191 FGVLMWEVFSEGKIP 205
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 70.9 bits (172), Expect = 4e-12, Method: Composition-based stats.
Identities = 53/193 (27%), Positives = 97/193 (50%), Gaps = 14/193 (7%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
LG G FG V++ VA+K + + ++F E +VMK++RH LV++ + S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 794 DDFKALIMEYMPNGSLENRLYSGTC-MLDIFQRLNIMIDVALALEY---LHFGH------ 843
+ ++ EYM GSL + L T L + Q +++ +A + Y +++ H
Sbjct: 82 EPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAA 140
Query: 844 STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYG 903
+ + +V ++DF +A+ + + + Q I + APE + GR + + DV+S+G
Sbjct: 141 NILVGENLVCKVADFGLARLIEDNEWTARQGAKFP-IKWTAPEAALYGRFTIKSDVWSFG 199
Query: 904 IMLME-TFTGKKP 915
I+L E T G+ P
Sbjct: 200 ILLTELTTKGRVP 212
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 70.9 bits (172), Expect = 4e-12, Method: Composition-based stats.
Identities = 53/196 (27%), Positives = 97/196 (49%), Gaps = 20/196 (10%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
LG G FG V++ VA+K + + ++F E +VMK++RH LV++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 794 DDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALAL-------EYLHFGH--- 843
+ ++ EYM GSL + L + + RL ++D+A + E +++ H
Sbjct: 85 EPI-YIVCEYMSKGSLLDFLKG---EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 844 ---STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVY 900
+ + +V ++DF +A+ + + + Q I + APE + GR + + DV+
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVW 199
Query: 901 SYGIMLME-TFTGKKP 915
S+GI+L E T G+ P
Sbjct: 200 SFGILLTELTTKGRVP 215
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 70.5 bits (171), Expect = 4e-12, Method: Composition-based stats.
Identities = 52/195 (26%), Positives = 91/195 (46%), Gaps = 18/195 (9%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
+G G FG V++ + +VA+K + + F +E EVM ++ H LV++ C
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEG-SMSEDDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 794 DDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHY--- 850
L+ E+M +G L + L + + L + +DV + YL +IH
Sbjct: 94 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL---EEACVIHRDLA 150
Query: 851 ---------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYS 901
V +SDF + +F+ DQ + T T + + +PE R S++ DV+S
Sbjct: 151 ARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 209
Query: 902 YGIMLMETFT-GKKP 915
+G+++ E F+ GK P
Sbjct: 210 FGVLMWEVFSEGKIP 224
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 70.1 bits (170), Expect = 6e-12, Method: Composition-based stats.
Identities = 50/195 (25%), Positives = 92/195 (47%), Gaps = 18/195 (9%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
LG G FG V + + +VA+K+ + + F +E +VM + H LV++ C+
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 794 DDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA 853
+I EYM NG L N L Q L + DV A+EYL S +H +A
Sbjct: 82 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL---ESKQFLHRDLA 138
Query: 854 ------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYS 901
+SDF +++++ D+ + + + + PE + + S++ D+++
Sbjct: 139 ARNCLVNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 197
Query: 902 YGIMLMETFT-GKKP 915
+G+++ E ++ GK P
Sbjct: 198 FGVLMWEIYSLGKMP 212
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 70.1 bits (170), Expect = 6e-12, Method: Composition-based stats.
Identities = 50/195 (25%), Positives = 92/195 (47%), Gaps = 18/195 (9%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
LG G FG V + + +VA+K+ + + F +E +VM + H LV++ C+
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 794 DDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA 853
+I EYM NG L N L Q L + DV A+EYL S +H +A
Sbjct: 75 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL---ESKQFLHRDLA 131
Query: 854 ------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYS 901
+SDF +++++ D+ + + + + PE + + S++ D+++
Sbjct: 132 ARNCLVNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 190
Query: 902 YGIMLMETFT-GKKP 915
+G+++ E ++ GK P
Sbjct: 191 FGVLMWEIYSLGKMP 205
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 70.1 bits (170), Expect = 6e-12, Method: Composition-based stats.
Identities = 50/195 (25%), Positives = 92/195 (47%), Gaps = 18/195 (9%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
LG G FG V + + +VA+K+ + + F +E +VM + H LV++ C+
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 794 DDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA 853
+I EYM NG L N L Q L + DV A+EYL S +H +A
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL---ESKQFLHRDLA 132
Query: 854 ------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYS 901
+SDF +++++ D+ + + + + PE + + S++ D+++
Sbjct: 133 ARNCLVNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 191
Query: 902 YGIMLMETFT-GKKP 915
+G+++ E ++ GK P
Sbjct: 192 FGVLMWEIYSLGKMP 206
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 70.1 bits (170), Expect = 6e-12, Method: Composition-based stats.
Identities = 50/195 (25%), Positives = 92/195 (47%), Gaps = 18/195 (9%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
LG G FG V + + +VA+K+ + + F +E +VM + H LV++ C+
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 794 DDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA 853
+I EYM NG L N L Q L + DV A+EYL S +H +A
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL---ESKQFLHRDLA 147
Query: 854 ------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYS 901
+SDF +++++ D+ + + + + PE + + S++ D+++
Sbjct: 148 ARNCLVNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 206
Query: 902 YGIMLMETFT-GKKP 915
+G+++ E ++ GK P
Sbjct: 207 FGVLMWEIYSLGKMP 221
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 70.1 bits (170), Expect = 6e-12, Method: Composition-based stats.
Identities = 50/195 (25%), Positives = 92/195 (47%), Gaps = 18/195 (9%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
LG G FG V + + +VA+K+ + + F +E +VM + H LV++ C+
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 794 DDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA 853
+I EYM NG L N L Q L + DV A+EYL S +H +A
Sbjct: 71 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL---ESKQFLHRDLA 127
Query: 854 ------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYS 901
+SDF +++++ D+ + + + + PE + + S++ D+++
Sbjct: 128 ARNCLVNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 186
Query: 902 YGIMLMETFT-GKKP 915
+G+++ E ++ GK P
Sbjct: 187 FGVLMWEIYSLGKMP 201
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 95/196 (48%), Gaps = 20/196 (10%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
LG G FG V++ VA+K + ++F E +VMK++RH LV++ + S
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-NMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 251
Query: 794 DDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALAL-------EYLHFGH--- 843
+ ++ EYM GSL + L + + RL ++D+A + E +++ H
Sbjct: 252 EPI-YIVTEYMSKGSLLDFLKG---EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 307
Query: 844 ---STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVY 900
+ + +V ++DF + + + + + Q I + APE + GR + + DV+
Sbjct: 308 RAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVW 366
Query: 901 SYGIMLME-TFTGKKP 915
S+GI+L E T G+ P
Sbjct: 367 SFGILLTELTTKGRVP 382
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 69.7 bits (169), Expect = 8e-12, Method: Composition-based stats.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 34/203 (16%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
LG G FG V++ VA+K + + ++F E +VMK++RH LV++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 794 DDFKALIMEYMPNGSLENRLYSGTCMLDIFQ-------RLNIMIDVALAL-------EYL 839
+ ++ EYM G C+LD + RL ++D+A + E +
Sbjct: 85 EPI-YIVTEYMSKG----------CLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 840 HFGH------STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRV 893
++ H + + +V ++DF +A+ + + + Q I + APE + GR
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRF 192
Query: 894 STRGDVYSYGIMLME-TFTGKKP 915
+ + DV+S+GI+L E T G+ P
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVP 215
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 69.7 bits (169), Expect = 8e-12, Method: Composition-based stats.
Identities = 62/198 (31%), Positives = 98/198 (49%), Gaps = 20/198 (10%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
+G G FG V + + G +VAVK + + ++F E VM ++RH NLV+++
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 794 DDFKALIM-EYMPNGSLENRLYS-GTCMLDIFQRLNIMIDVALALEYL---HFGH----- 843
+ I+ EYM GSL + L S G +L L +DV A+EYL +F H
Sbjct: 71 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAA 130
Query: 844 -STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSY 902
+ + VA +SDF + K + S Q + + APE + + ST+ DV+S+
Sbjct: 131 RNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSF 185
Query: 903 GIMLMETFT-GKKPTDEI 919
GI+L E ++ G+ P I
Sbjct: 186 GILLWEIYSFGRVPYPRI 203
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 69.7 bits (169), Expect = 8e-12, Method: Composition-based stats.
Identities = 62/198 (31%), Positives = 98/198 (49%), Gaps = 20/198 (10%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
+G G FG V + + G +VAVK + + ++F E VM ++RH NLV+++
Sbjct: 29 IGKGEFGDVMLGDYR-GNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 794 DDFKALIM-EYMPNGSLENRLYS-GTCMLDIFQRLNIMIDVALALEYL---HFGH----- 843
+ I+ EYM GSL + L S G +L L +DV A+EYL +F H
Sbjct: 86 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAA 145
Query: 844 -STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSY 902
+ + VA +SDF + K + S Q + + APE + + ST+ DV+S+
Sbjct: 146 RNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSF 200
Query: 903 GIMLMETFT-GKKPTDEI 919
GI+L E ++ G+ P I
Sbjct: 201 GILLWEIYSFGRVPYPRI 218
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 69.7 bits (169), Expect = 8e-12, Method: Composition-based stats.
Identities = 50/195 (25%), Positives = 92/195 (47%), Gaps = 18/195 (9%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
LG G FG V + + +VA+K+ + + F +E +VM + H LV++ C+
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 794 DDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA 853
+I EYM NG L N L Q L + DV A+EYL S +H +A
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL---ESKQFLHRDLA 132
Query: 854 ------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYS 901
+SDF +++++ D+ + + + + PE + + S++ D+++
Sbjct: 133 ARNCLVNDQGVVKVSDFGLSRYVL-DDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWA 191
Query: 902 YGIMLMETFT-GKKP 915
+G+++ E ++ GK P
Sbjct: 192 FGVLMWEIYSLGKMP 206
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 69.3 bits (168), Expect = 1e-11, Method: Composition-based stats.
Identities = 50/195 (25%), Positives = 92/195 (47%), Gaps = 18/195 (9%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
LG G FG V + + +VA+K+ + + F +E +VM + H LV++ C+
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 794 DDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA 853
+I EYM NG L N L Q L + DV A+EYL S +H +A
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL---ESKQFLHRDLA 147
Query: 854 ------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYS 901
+SDF +++++ ++ S + + + PE + + S++ D+++
Sbjct: 148 ARNCLVNDQGVVKVSDFGLSRYVLDDEETS-SVGSKFPVRWSPPEVLMYSKFSSKSDIWA 206
Query: 902 YGIMLMETFT-GKKP 915
+G+++ E ++ GK P
Sbjct: 207 FGVLMWEIYSLGKMP 221
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 105/227 (46%), Gaps = 19/227 (8%)
Query: 709 SPQAIRRFSYHELLQATDRFSKNNLLGIGSFGSVYVARLQ----DGMEVAVKVFHQRY-E 763
S Q + F+ L AT+ S + ++G G FG V RL+ + VA+K Y E
Sbjct: 2 STQTVHEFAKE--LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE 58
Query: 764 RALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIF 823
+ + F E +M + H N++++ + ++ E M NGSL++ L +
Sbjct: 59 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI 118
Query: 824 QRLNIMIDVALALEYLH---------FGHSTPIIHYMVAHISDFSIAKFLNGQDQLSMQT 874
Q + ++ +A ++YL + I +V +SDF +++ L + + T
Sbjct: 119 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 178
Query: 875 Q-TLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEI 919
+ I + +PE + ++ DV+SYGI+L E + G++P E+
Sbjct: 179 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM 225
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 68.9 bits (167), Expect = 1e-11, Method: Composition-based stats.
Identities = 62/198 (31%), Positives = 97/198 (48%), Gaps = 20/198 (10%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
+G G FG V + + G +VAVK + + ++F E VM ++RH NLV+++
Sbjct: 20 IGKGEFGDVMLGDYR-GNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 794 DDFKALIM-EYMPNGSLENRLYS-GTCMLDIFQRLNIMIDVALALEYL---HFGH----- 843
+ I+ EYM GSL + L S G +L L +DV A+EYL +F H
Sbjct: 77 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAA 136
Query: 844 -STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSY 902
+ + VA +SDF + K + S Q + + APE + ST+ DV+S+
Sbjct: 137 RNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREAAFSTKSDVWSF 191
Query: 903 GIMLMETFT-GKKPTDEI 919
GI+L E ++ G+ P I
Sbjct: 192 GILLWEIYSFGRVPYPRI 209
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 100/219 (45%), Gaps = 18/219 (8%)
Query: 719 HELLQATD--RFSKNNLLGIGSFGSVYVARLQ----DGMEVAVKVFHQRY-ERALKSFQD 771
HE + D S + ++G G FG V RL+ + VA+K Y E+ + F
Sbjct: 36 HEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 772 ECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMID 831
E +M + H N++++ + ++ E M NGSL++ L + Q + ++
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 832 VALALEYLH---------FGHSTPIIHYMVAHISDFSIAKFLNGQDQLSMQTQ-TLATIG 881
+A ++YL + I +V +SDF +++ L + + T+ I
Sbjct: 156 IASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 882 YMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEI 919
+ +PE + ++ DV+SYGI+L E + G++P E+
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM 254
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 100/219 (45%), Gaps = 18/219 (8%)
Query: 719 HELLQATD--RFSKNNLLGIGSFGSVYVARLQ----DGMEVAVKVFHQRY-ERALKSFQD 771
HE + D S + ++G G FG V RL+ + VA+K Y E+ + F
Sbjct: 36 HEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 772 ECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMID 831
E +M + H N++++ + ++ E M NGSL++ L + Q + ++
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 832 VALALEYLH---------FGHSTPIIHYMVAHISDFSIAKFLNGQDQLSMQTQ-TLATIG 881
+A ++YL + I +V +SDF +++ L + + T+ I
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 882 YMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEI 919
+ +PE + ++ DV+SYGI+L E + G++P E+
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM 254
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 96/198 (48%), Gaps = 20/198 (10%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
+G G FG V + + G +VAVK + + ++F E VM ++RH NLV+++
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 257
Query: 794 DDFKALIM-EYMPNGSLENRLYS-GTCMLDIFQRLNIMIDVALALEYLH---FGHSTPII 848
+ I+ EYM GSL + L S G +L L +DV A+EYL F H
Sbjct: 258 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAA 317
Query: 849 HYM------VAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSY 902
+ VA +SDF + K + S Q + + APE + + ST+ DV+S+
Sbjct: 318 RNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSF 372
Query: 903 GIMLMETFT-GKKPTDEI 919
GI+L E ++ G+ P I
Sbjct: 373 GILLWEIYSFGRVPYPRI 390
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 93/206 (45%), Gaps = 24/206 (11%)
Query: 731 NNLLGIGSFGSVYVARLQDGME----VAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLV 785
++G G FG V RL+ + VA+K Y ER + F E +M + H N++
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 80
Query: 786 KIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHST 845
++ +N ++ E+M NG+L++ L + Q + ++ +A + YL
Sbjct: 81 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL---AEM 137
Query: 846 PIIHY------------MVAHISDFSIAKFLNGQDQLSMQTQTLA---TIGYMAPEYGVQ 890
+H +V +SDF +++FL +T +L I + APE
Sbjct: 138 SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAF 197
Query: 891 GRVSTRGDVYSYGIMLMETFT-GKKP 915
+ ++ D +SYGI++ E + G++P
Sbjct: 198 RKFTSASDAWSYGIVMWEVMSFGERP 223
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 107/232 (46%), Gaps = 31/232 (13%)
Query: 713 IRRFSYHELLQATDRFSKN---------NLLGIGSFGSVYVARLQ----DGMEVAVKVFH 759
I F++ + +A F+K ++G G FG V L+ + VA+K
Sbjct: 11 IDPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLK 70
Query: 760 QRY-ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTC 818
Y E+ + F E +M + H N++ + + +I E+M NGSL++ L
Sbjct: 71 SGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDG 130
Query: 819 MLDIFQRLNIMIDVALALEYL---HFGH------STPIIHYMVAHISDFSIAKFLNGQDQ 869
+ Q + ++ +A ++YL ++ H + + +V +SDF +++FL +D
Sbjct: 131 QFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFL--EDD 188
Query: 870 LSMQTQTLA-----TIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKP 915
S T T A I + APE + ++ DV+SYGI++ E + G++P
Sbjct: 189 TSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 240
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 95/208 (45%), Gaps = 17/208 (8%)
Query: 729 SKNNLLGIGSFGSVYVARLQDG-----MEVAVKVFHQRY-ERALKSFQDECEVMKRIRHR 782
++ ++G G FG VY L+ + VA+K Y E+ F E +M + H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 783 NLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYL--- 839
N++++ S +I EYM NG+L+ L + Q + ++ +A ++YL
Sbjct: 107 NIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM 166
Query: 840 HFGHSTPIIH------YMVAHISDFSIAKFLNGQDQLSMQTQ-TLATIGYMAPEYGVQGR 892
++ H +V +SDF +++ L + + T I + APE +
Sbjct: 167 NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRK 226
Query: 893 VSTRGDVYSYGIMLMETFT-GKKPTDEI 919
++ DV+S+GI++ E T G++P E+
Sbjct: 227 FTSASDVWSFGIVMWEVMTYGERPYWEL 254
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 66.6 bits (161), Expect = 6e-11, Method: Composition-based stats.
Identities = 63/226 (27%), Positives = 100/226 (44%), Gaps = 33/226 (14%)
Query: 725 TDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRYERALK---SFQDECEVMKRIR 780
+DR+ +LG G V++AR L+D +VAVKV R F+ E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 781 HRNLVKIISACSNDD----FKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALAL 836
H +V + + ++MEY+ +L + +++ M + + ++ D A
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPK-RAIEVIAD---AC 126
Query: 837 EYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLSMQTQTLATIG--- 881
+ L+F H IIH V + DF IA+ + D + TQT A IG
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI--ADSGNSVTQTAAVIGTAQ 184
Query: 882 YMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLS 927
Y++PE V R DVYS G +L E TG+ P F G+ +S
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGDSPVS 226
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 66.6 bits (161), Expect = 7e-11, Method: Composition-based stats.
Identities = 60/214 (28%), Positives = 95/214 (44%), Gaps = 29/214 (13%)
Query: 725 TDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRYERALK---SFQDECEVMKRIR 780
+DR+ +LG G V++AR L+D +VAVKV R F+ E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 781 HRNLVKIISACSNDD----FKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALAL 836
H +V + + ++MEY+ +L + +++ M + + ++ D A
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPK-RAIEVIAD---AC 126
Query: 837 EYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLSMQTQTLATIG--- 881
+ L+F H IIH V + DF IA+ + D + TQT A IG
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI--ADSGNSVTQTAAVIGTAQ 184
Query: 882 YMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKP 915
Y++PE V R DVYS G +L E TG+ P
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 66.6 bits (161), Expect = 7e-11, Method: Composition-based stats.
Identities = 67/241 (27%), Positives = 107/241 (44%), Gaps = 49/241 (20%)
Query: 726 DRFSKNNLLGIGSFGSVYVA--------RLQDGMEVAVKVFHQ-RYERALKSFQDECEVM 776
D+ + LG G+FG V +A + ++ + VAVK+ E+ L E E+M
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 777 KRI-RHRNLVKIISACSNDDFKALIMEYMPNGSLENRL---------YSGTCMLDI---- 822
K I +H+N++ ++ AC+ D +I+EY G+L L YS DI
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS----YDINRVP 150
Query: 823 -----FQRL-NIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFL 864
F+ L + +A +EYL S IH +A I+DF +A+ +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 865 NGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGE 923
N D T + +MAPE + + DV+S+G+++ E FT G P I + E
Sbjct: 208 NNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 924 L 924
L
Sbjct: 268 L 268
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 66.2 bits (160), Expect = 8e-11, Method: Composition-based stats.
Identities = 65/237 (27%), Positives = 106/237 (44%), Gaps = 41/237 (17%)
Query: 726 DRFSKNNLLGIGSFGSVYVA--------RLQDGMEVAVKVFHQ-RYERALKSFQDECEVM 776
D+ + LG G+FG V +A + ++ + VAVK+ E+ L E E+M
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 777 KRI-RHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSG-----TCMLDI-------- 822
K I +H+N++ ++ AC+ D +I+EY G+L L + DI
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQM 154
Query: 823 -FQRL-NIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQD 868
F+ L + +A +EYL S IH +A I+DF +A+ +N D
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 869 QLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGEL 924
T + +MAPE + + DV+S+G+++ E FT G P I + EL
Sbjct: 212 XXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 66.2 bits (160), Expect = 8e-11, Method: Composition-based stats.
Identities = 67/241 (27%), Positives = 107/241 (44%), Gaps = 49/241 (20%)
Query: 726 DRFSKNNLLGIGSFGSVYVA--------RLQDGMEVAVKVFHQ-RYERALKSFQDECEVM 776
D+ + LG G+FG V +A + ++ + VAVK+ E+ L E E+M
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 777 KRI-RHRNLVKIISACSNDDFKALIMEYMPNGSLENRL---------YSGTCMLDI---- 822
K I +H+N++ ++ AC+ D +I+EY G+L L YS DI
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS----YDINRVP 150
Query: 823 -----FQRL-NIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFL 864
F+ L + +A +EYL S IH +A I+DF +A+ +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDI 207
Query: 865 NGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGE 923
N D T + +MAPE + + DV+S+G+++ E FT G P I + E
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 924 L 924
L
Sbjct: 268 L 268
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 66.2 bits (160), Expect = 9e-11, Method: Composition-based stats.
Identities = 63/232 (27%), Positives = 101/232 (43%), Gaps = 34/232 (14%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQD---GMEVAVKVFH---QRYERALKSFQDECEVMKRI 779
+R+ + LG G +VY+A +D ++VA+K + E LK F+ E ++
Sbjct: 11 ERYKIVDKLGGGGMSTVYLA--EDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQL 68
Query: 780 RHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYS-GTCMLDIFQRLNIMIDVALALEY 838
H+N+V +I DD L+MEY+ +L + S G +D I L+
Sbjct: 69 SHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQI-----LDG 123
Query: 839 LHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPE 886
+ H I+H + I DF IAK L+ + L+ L T+ Y +PE
Sbjct: 124 IKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALS-ETSLTQTNHVLGTVQYFSPE 182
Query: 887 YGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLS---RWVNDLLP 935
D+YS GI+L E G+ P F GE ++S + + D +P
Sbjct: 183 QAKGEATDECTDIYSIGIVLYEMLVGEPP----FNGETAVSIAIKHIQDSVP 230
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 105/237 (44%), Gaps = 41/237 (17%)
Query: 726 DRFSKNNLLGIGSFGSVYVA--------RLQDGMEVAVKVFHQRY-ERALKSFQDECEVM 776
D+ + LG G FG V +A + ++ + VAVK+ E+ L E E+M
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140
Query: 777 KRI-RHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSG-----TCMLDI-------- 822
K I +H+N++ ++ AC+ D +I+EY G+L L + DI
Sbjct: 141 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 200
Query: 823 -FQRL-NIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQD 868
F+ L + +A +EYL S IH +A I+DF +A+ +N D
Sbjct: 201 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 257
Query: 869 QLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGEL 924
T + +MAPE + + DV+S+G+++ E FT G P I + EL
Sbjct: 258 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 314
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 92/206 (44%), Gaps = 24/206 (11%)
Query: 731 NNLLGIGSFGSVYVARLQDGME----VAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLV 785
++G G FG V RL+ + VA+K Y ER + F E +M + H N++
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 786 KIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHST 845
++ +N ++ E+M NG+L++ L + Q + ++ +A + YL
Sbjct: 79 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL---AEM 135
Query: 846 PIIHY------------MVAHISDFSIAKFLNGQDQLSMQTQTLA---TIGYMAPEYGVQ 890
+H +V +SDF +++FL T +L I + APE
Sbjct: 136 SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAF 195
Query: 891 GRVSTRGDVYSYGIMLMETFT-GKKP 915
+ ++ D +SYGI++ E + G++P
Sbjct: 196 RKFTSASDAWSYGIVMWEVMSFGERP 221
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 22/205 (10%)
Query: 731 NNLLGIGSFGSVYVARLQ----DGMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLV 785
++G G FG V L+ + VA+K Y E+ + F E +M + H N++
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 786 KIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYL---HFG 842
+ + +I E+M NGSL++ L + Q + ++ +A ++YL ++
Sbjct: 72 HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYV 131
Query: 843 HSTPIIH------YMVAHISDFSIAKFLNGQDQLSMQTQTLA-----TIGYMAPEYGVQG 891
H +V +SDF +++FL +D S T T A I + APE
Sbjct: 132 HRALAARNILVNSNLVCKVSDFGLSRFL--EDDTSDPTYTSALGGKIPIRWTAPEAIQYR 189
Query: 892 RVSTRGDVYSYGIMLMETFT-GKKP 915
+ ++ DV+SYGI++ E + G++P
Sbjct: 190 KFTSASDVWSYGIVMWEVMSYGERP 214
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 24/199 (12%)
Query: 734 LGIGSFGSVYVARLQ-----DGMEVAVKVFH-QRYERALKSFQDECEVMKRIRHRNLVKI 787
LG G FG V + R G +VAVK + + + E E+++ + H N+VK
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 788 ISACSNDDFKA--LIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHST 845
C+ D LIME++P+GSL+ L +++ Q+L + + ++YL S
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL---GSR 145
Query: 846 PIIHYMVA------------HISDFSIAKFLN-GQDQLSMQTQTLATIGYMAPEYGVQGR 892
+H +A I DF + K + ++ +++ + + + APE +Q +
Sbjct: 146 QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSK 205
Query: 893 VSTRGDVYSYGIMLMETFT 911
DV+S+G+ L E T
Sbjct: 206 FYIASDVWSFGVTLHELLT 224
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 65.9 bits (159), Expect = 1e-10, Method: Composition-based stats.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 19/208 (9%)
Query: 722 LQATDRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQDECEVMKRIR 780
++ TD K+ L G G +G VYV + + VAVK + ++ F E VMK I+
Sbjct: 29 MERTDITMKHKLGG-GQYGEVYVGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIK 86
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTC---MLDIFQRLNIMIDVALALE 837
H NLV+++ C+ + ++ EYMP G+L + Y C + L + ++ A+E
Sbjct: 87 HPNLVQLLGVCTLEPPFYIVTEYMPYGNLLD--YLRECNREEVTAVVLLYMATQISSAME 144
Query: 838 YL---HFGH------STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYG 888
YL +F H + + V ++DF +++ + G D + I + APE
Sbjct: 145 YLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESL 203
Query: 889 VQGRVSTRGDVYSYGIMLMETFT-GKKP 915
S + DV+++G++L E T G P
Sbjct: 204 AYNTFSIKSDVWAFGVLLWEIATYGMSP 231
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 24/199 (12%)
Query: 734 LGIGSFGSVYVARLQ-----DGMEVAVKVFH-QRYERALKSFQDECEVMKRIRHRNLVKI 787
LG G FG V + R G +VAVK + + + E E+++ + H N+VK
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 788 ISACSNDDFKA--LIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHST 845
C+ D LIME++P+GSL+ L +++ Q+L + + ++YL S
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL---GSR 133
Query: 846 PIIHYMVA------------HISDFSIAKFLN-GQDQLSMQTQTLATIGYMAPEYGVQGR 892
+H +A I DF + K + ++ +++ + + + APE +Q +
Sbjct: 134 QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSK 193
Query: 893 VSTRGDVYSYGIMLMETFT 911
DV+S+G+ L E T
Sbjct: 194 FYIASDVWSFGVTLHELLT 212
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 92/209 (44%), Gaps = 35/209 (16%)
Query: 734 LGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQDEC---EVMKRIRHRNLVKI-- 787
LG G FG V QD G +VA+K Q E + K+ + C ++MK++ H N+V
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQ--ELSPKNRERWCLEIQIMKKLNHPNVVSARE 79
Query: 788 ----ISACSNDDFKALIMEYMPNGSLENRL--YSGTCMLDIFQRLNIMIDVALALEYLHF 841
+ + +D L MEY G L L + C L ++ D++ AL YLH
Sbjct: 80 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH- 138
Query: 842 GHSTPIIHY---------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPE 886
IIH ++ I D AK L DQ + T+ + T+ Y+APE
Sbjct: 139 --ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL---DQGELCTEFVGTLQYLAPE 193
Query: 887 YGVQGRVSTRGDVYSYGIMLMETFTGKKP 915
Q + + D +S+G + E TG +P
Sbjct: 194 LLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.9 bits (159), Expect = 1e-10, Method: Composition-based stats.
Identities = 67/241 (27%), Positives = 107/241 (44%), Gaps = 49/241 (20%)
Query: 726 DRFSKNNLLGIGSFGSVYVA--------RLQDGMEVAVKVFHQ-RYERALKSFQDECEVM 776
D+ + LG G+FG V +A + ++ + VAVK+ E+ L E E+M
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 777 KRI-RHRNLVKIISACSNDDFKALIMEYMPNGSLENRL---------YSGTCMLDI---- 822
K I +H+N++ ++ AC+ D +I+EY G+L L YS DI
Sbjct: 95 KMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS----YDINRVP 150
Query: 823 -----FQRL-NIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFL 864
F+ L + +A +EYL S IH +A I+DF +A+ +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 865 NGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGE 923
N D T + +MAPE + + DV+S+G+++ E FT G P I + E
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 924 L 924
L
Sbjct: 268 L 268
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 65.9 bits (159), Expect = 1e-10, Method: Composition-based stats.
Identities = 51/205 (24%), Positives = 88/205 (42%), Gaps = 16/205 (7%)
Query: 727 RFSKNNLLGIGSFGSVYVARL----QDGMEVAVKVFHQRY-ERALKSFQDECEVMKRIRH 781
R ++G G G V RL Q + VA+K Y ER + F E +M + H
Sbjct: 50 RIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDH 109
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH- 840
N++++ + ++ EYM NGSL+ L + I Q + ++ V + YL
Sbjct: 110 PNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSD 169
Query: 841 --------FGHSTPIIHYMVAHISDFSIAKFL-NGQDQLSMQTQTLATIGYMAPEYGVQG 891
+ + +V +SDF +++ L + D T I + APE
Sbjct: 170 LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFR 229
Query: 892 RVSTRGDVYSYGIMLMETFT-GKKP 915
S+ DV+S+G+++ E G++P
Sbjct: 230 TFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 65.9 bits (159), Expect = 1e-10, Method: Composition-based stats.
Identities = 54/228 (23%), Positives = 101/228 (44%), Gaps = 25/228 (10%)
Query: 717 SYHELLQATDRFSKN---------NLLGIGSFGSVYVARLQ----DGMEVAVKVFHQRY- 762
+Y + QA F+K ++G G FG V RL+ + VA+K Y
Sbjct: 4 TYEDPNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYT 63
Query: 763 ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDI 822
E+ + F E +M + H N++ + + ++ EYM NGSL+ L +
Sbjct: 64 EKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTV 123
Query: 823 FQRLNIMIDVALALEYLH---------FGHSTPIIHYMVAHISDFSIAKFLNGQDQLSMQ 873
Q + ++ ++ ++YL + I +V +SDF +++ L + +
Sbjct: 124 IQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 183
Query: 874 TQ-TLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEI 919
T+ I + APE + ++ DV+SYGI++ E + G++P E+
Sbjct: 184 TRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEM 231
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 65.9 bits (159), Expect = 1e-10, Method: Composition-based stats.
Identities = 67/241 (27%), Positives = 107/241 (44%), Gaps = 49/241 (20%)
Query: 726 DRFSKNNLLGIGSFGSVYVA--------RLQDGMEVAVKVFHQ-RYERALKSFQDECEVM 776
D+ + LG G+FG V +A + ++ + VAVK+ E+ L E E+M
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 777 KRI-RHRNLVKIISACSNDDFKALIMEYMPNGSLENRL---------YSGTCMLDI---- 822
K I +H+N++ ++ AC+ D +I+EY G+L L YS DI
Sbjct: 95 KMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS----YDINRVP 150
Query: 823 -----FQRL-NIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFL 864
F+ L + +A +EYL S IH +A I+DF +A+ +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 865 NGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGE 923
N D T + +MAPE + + DV+S+G+++ E FT G P I + E
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 924 L 924
L
Sbjct: 268 L 268
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 92/209 (44%), Gaps = 35/209 (16%)
Query: 734 LGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQDEC---EVMKRIRHRNLVKI-- 787
LG G FG V QD G +VA+K Q E + K+ + C ++MK++ H N+V
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQ--ELSPKNRERWCLEIQIMKKLNHPNVVSARE 80
Query: 788 ----ISACSNDDFKALIMEYMPNGSLENRL--YSGTCMLDIFQRLNIMIDVALALEYLHF 841
+ + +D L MEY G L L + C L ++ D++ AL YLH
Sbjct: 81 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH- 139
Query: 842 GHSTPIIHY---------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPE 886
IIH ++ I D AK L DQ + T+ + T+ Y+APE
Sbjct: 140 --ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL---DQGELCTEFVGTLQYLAPE 194
Query: 887 YGVQGRVSTRGDVYSYGIMLMETFTGKKP 915
Q + + D +S+G + E TG +P
Sbjct: 195 LLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 65.9 bits (159), Expect = 1e-10, Method: Composition-based stats.
Identities = 67/241 (27%), Positives = 107/241 (44%), Gaps = 49/241 (20%)
Query: 726 DRFSKNNLLGIGSFGSVYVA--------RLQDGMEVAVKVFHQ-RYERALKSFQDECEVM 776
D+ + LG G+FG V +A + ++ + VAVK+ E+ L E E+M
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 777 KRI-RHRNLVKIISACSNDDFKALIMEYMPNGSLENRL---------YSGTCMLDI---- 822
K I +H+N++ ++ AC+ D +I+EY G+L L YS DI
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS----YDINRVP 150
Query: 823 -----FQRL-NIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFL 864
F+ L + +A +EYL S IH +A I+DF +A+ +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 865 NGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGE 923
N D T + +MAPE + + DV+S+G+++ E FT G P I + E
Sbjct: 208 NNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 924 L 924
L
Sbjct: 268 L 268
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 65.5 bits (158), Expect = 2e-10, Method: Composition-based stats.
Identities = 51/205 (24%), Positives = 88/205 (42%), Gaps = 16/205 (7%)
Query: 727 RFSKNNLLGIGSFGSVYVARL----QDGMEVAVKVFHQRY-ERALKSFQDECEVMKRIRH 781
R ++G G G V RL Q + VA+K Y ER + F E +M + H
Sbjct: 50 RIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDH 109
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH- 840
N++++ + ++ EYM NGSL+ L + I Q + ++ V + YL
Sbjct: 110 PNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSD 169
Query: 841 --------FGHSTPIIHYMVAHISDFSIAKFL-NGQDQLSMQTQTLATIGYMAPEYGVQG 891
+ + +V +SDF +++ L + D T I + APE
Sbjct: 170 LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFR 229
Query: 892 RVSTRGDVYSYGIMLMETFT-GKKP 915
S+ DV+S+G+++ E G++P
Sbjct: 230 TFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 65.5 bits (158), Expect = 2e-10, Method: Composition-based stats.
Identities = 67/241 (27%), Positives = 106/241 (43%), Gaps = 49/241 (20%)
Query: 726 DRFSKNNLLGIGSFGSVYVA--------RLQDGMEVAVKVFHQ-RYERALKSFQDECEVM 776
D+ + LG G FG V +A + ++ + VAVK+ E+ L E E+M
Sbjct: 27 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 86
Query: 777 KRI-RHRNLVKIISACSNDDFKALIMEYMPNGSLENRL---------YSGTCMLDI---- 822
K I +H+N++ ++ AC+ D +I+EY G+L L YS DI
Sbjct: 87 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS----YDINRVP 142
Query: 823 -----FQRL-NIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFL 864
F+ L + +A +EYL S IH +A I+DF +A+ +
Sbjct: 143 EEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 199
Query: 865 NGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGE 923
N D T + +MAPE + + DV+S+G+++ E FT G P I + E
Sbjct: 200 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 259
Query: 924 L 924
L
Sbjct: 260 L 260
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 65.5 bits (158), Expect = 2e-10, Method: Composition-based stats.
Identities = 67/241 (27%), Positives = 106/241 (43%), Gaps = 49/241 (20%)
Query: 726 DRFSKNNLLGIGSFGSVYVA--------RLQDGMEVAVKVFHQ-RYERALKSFQDECEVM 776
D+ + LG G FG V +A + ++ + VAVK+ E+ L E E+M
Sbjct: 24 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 83
Query: 777 KRI-RHRNLVKIISACSNDDFKALIMEYMPNGSLENRL---------YSGTCMLDI---- 822
K I +H+N++ ++ AC+ D +I+EY G+L L YS DI
Sbjct: 84 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS----YDINRVP 139
Query: 823 -----FQRL-NIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFL 864
F+ L + +A +EYL S IH +A I+DF +A+ +
Sbjct: 140 EEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 196
Query: 865 NGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGE 923
N D T + +MAPE + + DV+S+G+++ E FT G P I + E
Sbjct: 197 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 256
Query: 924 L 924
L
Sbjct: 257 L 257
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 52/193 (26%), Positives = 94/193 (48%), Gaps = 13/193 (6%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
LG G FG V++ + +VAVK + ++++F +E +MK ++H LV++ + +
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 794 DDFKALIMEYMPNGSLENRLYS---GTCMLDIFQRLNIMIDVALAL----EYLH---FGH 843
++ +I EYM GSL + L S G +L + I +A Y+H
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAA 139
Query: 844 STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYG 903
+ + ++ I+DF +A+ + + + + I + APE G + + DV+S+G
Sbjct: 140 NVLVSESLMCKIADFGLARVIEDNEYTAREGAKFP-IKWTAPEAINFGCFTIKSDVWSFG 198
Query: 904 IMLMETFT-GKKP 915
I+L E T GK P
Sbjct: 199 ILLYEIVTYGKIP 211
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 67/241 (27%), Positives = 106/241 (43%), Gaps = 49/241 (20%)
Query: 726 DRFSKNNLLGIGSFGSVYVA--------RLQDGMEVAVKVFHQ-RYERALKSFQDECEVM 776
D+ + LG G+FG V +A + ++ + VAVK+ E L E E+M
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMM 94
Query: 777 KRI-RHRNLVKIISACSNDDFKALIMEYMPNGSLENRL---------YSGTCMLDI---- 822
K I +H+N++ ++ AC+ D +I+EY G+L L YS DI
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS----YDINRVP 150
Query: 823 -----FQRL-NIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFL 864
F+ L + +A +EYL S IH +A I+DF +A+ +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 865 NGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGE 923
N D T + +MAPE + + DV+S+G+++ E FT G P I + E
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 924 L 924
L
Sbjct: 268 L 268
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 67/241 (27%), Positives = 105/241 (43%), Gaps = 49/241 (20%)
Query: 726 DRFSKNNLLGIGSFGSVYVA--------RLQDGMEVAVKVFHQ-RYERALKSFQDECEVM 776
D+ + LG G FG V +A + ++ + VAVK+ E+ L E E+M
Sbjct: 22 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 81
Query: 777 KRI-RHRNLVKIISACSNDDFKALIMEYMPNGSLENRL---------YSGTCMLDI---- 822
K I +H+N++ ++ AC+ D +I+EY G+L L YS DI
Sbjct: 82 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS----YDINRVP 137
Query: 823 -----FQRL-NIMIDVALALEYLHFGHSTPIIHY------------MVAHISDFSIAKFL 864
F+ L + +A +EYL S IH V I+DF +A+ +
Sbjct: 138 EEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDI 194
Query: 865 NGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGE 923
N D T + +MAPE + + DV+S+G+++ E FT G P I + E
Sbjct: 195 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 254
Query: 924 L 924
L
Sbjct: 255 L 255
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 54/196 (27%), Positives = 94/196 (47%), Gaps = 20/196 (10%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
LG G FG V++ +VAVK Q + +F E +MK+++H+ LV++ + +
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 87
Query: 794 DDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALAL-EYLHFGHSTPIIH--- 849
+ +I EYM NGSL + L + + I +N ++D+A + E + F IH
Sbjct: 88 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 143
Query: 850 ---------YMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVY 900
+ I+DF +A+ + + + + I + APE G + + DV+
Sbjct: 144 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP-IKWTAPEAINYGTFTIKSDVW 202
Query: 901 SYGIMLMETFT-GKKP 915
S+GI+L E T G+ P
Sbjct: 203 SFGILLTEIVTHGRIP 218
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 54/196 (27%), Positives = 94/196 (47%), Gaps = 20/196 (10%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
LG G FG V++ +VAVK Q + +F E +MK+++H+ LV++ + +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 794 DDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALAL-EYLHFGHSTPIIH--- 849
+ +I EYM NGSL + L + + I +N ++D+A + E + F IH
Sbjct: 86 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 141
Query: 850 ---------YMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVY 900
+ I+DF +A+ + + + + I + APE G + + DV+
Sbjct: 142 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP-IKWTAPEAINYGTFTIKSDVW 200
Query: 901 SYGIMLMETFT-GKKP 915
S+GI+L E T G+ P
Sbjct: 201 SFGILLTEIVTHGRIP 216
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 64.7 bits (156), Expect = 3e-10, Method: Composition-based stats.
Identities = 54/196 (27%), Positives = 94/196 (47%), Gaps = 20/196 (10%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
LG G FG V++ +VAVK Q + +F E +MK+++H+ LV++ + +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 794 DDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALAL-EYLHFGHSTPIIH--- 849
+ +I EYM NGSL + L + + I +N ++D+A + E + F IH
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 135
Query: 850 ---------YMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVY 900
+ I+DF +A+ + + + + I + APE G + + DV+
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP-IKWTAPEAINYGTFTIKSDVW 194
Query: 901 SYGIMLMETFT-GKKP 915
S+GI+L E T G+ P
Sbjct: 195 SFGILLTEIVTHGRIP 210
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 64.7 bits (156), Expect = 3e-10, Method: Composition-based stats.
Identities = 54/196 (27%), Positives = 94/196 (47%), Gaps = 20/196 (10%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
LG G FG V++ +VAVK Q + +F E +MK+++H+ LV++ + +
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 88
Query: 794 DDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALAL-EYLHFGHSTPIIH--- 849
+ +I EYM NGSL + L + + I +N ++D+A + E + F IH
Sbjct: 89 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 144
Query: 850 ---------YMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVY 900
+ I+DF +A+ + + + + I + APE G + + DV+
Sbjct: 145 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP-IKWTAPEAINYGTFTIKSDVW 203
Query: 901 SYGIMLMETFT-GKKP 915
S+GI+L E T G+ P
Sbjct: 204 SFGILLTEIVTHGRIP 219
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 64.7 bits (156), Expect = 3e-10, Method: Composition-based stats.
Identities = 54/196 (27%), Positives = 94/196 (47%), Gaps = 20/196 (10%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
LG G FG V++ +VAVK Q + +F E +MK+++H+ LV++ + +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 794 DDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALAL-EYLHFGHSTPIIH--- 849
+ +I EYM NGSL + L + + I +N ++D+A + E + F IH
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 135
Query: 850 ---------YMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVY 900
+ I+DF +A+ + + + + I + APE G + + DV+
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP-IKWTAPEAINYGTFTIKSDVW 194
Query: 901 SYGIMLMETFT-GKKP 915
S+GI+L E T G+ P
Sbjct: 195 SFGILLTEIVTHGRIP 210
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 64.7 bits (156), Expect = 3e-10, Method: Composition-based stats.
Identities = 54/196 (27%), Positives = 94/196 (47%), Gaps = 20/196 (10%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
LG G FG V++ +VAVK Q + +F E +MK+++H+ LV++ + +
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 80
Query: 794 DDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALAL-EYLHFGHSTPIIH--- 849
+ +I EYM NGSL + L + + I +N ++D+A + E + F IH
Sbjct: 81 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 136
Query: 850 ---------YMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVY 900
+ I+DF +A+ + + + + I + APE G + + DV+
Sbjct: 137 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP-IKWTAPEAINYGTFTIKSDVW 195
Query: 901 SYGIMLMETFT-GKKP 915
S+GI+L E T G+ P
Sbjct: 196 SFGILLTEIVTHGRIP 211
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 64.7 bits (156), Expect = 3e-10, Method: Composition-based stats.
Identities = 54/196 (27%), Positives = 94/196 (47%), Gaps = 20/196 (10%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
LG G FG V++ +VAVK Q + +F E +MK+++H+ LV++ + +
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 81
Query: 794 DDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALAL-EYLHFGHSTPIIH--- 849
+ +I EYM NGSL + L + + I +N ++D+A + E + F IH
Sbjct: 82 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 137
Query: 850 ---------YMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVY 900
+ I+DF +A+ + + + + I + APE G + + DV+
Sbjct: 138 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP-IKWTAPEAINYGTFTIKSDVW 196
Query: 901 SYGIMLMETFT-GKKP 915
S+GI+L E T G+ P
Sbjct: 197 SFGILLTEIVTHGRIP 212
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 62/226 (27%), Positives = 99/226 (43%), Gaps = 33/226 (14%)
Query: 725 TDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRYERALK---SFQDECEVMKRIR 780
+DR+ +LG G V++AR L+D +VAVKV R F+ E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 781 HRNLVKIISACSNDD----FKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALAL 836
H +V + + ++MEY+ +L + +++ M + + ++ D A
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPK-RAIEVIAD---AC 126
Query: 837 EYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLSMQTQTLATIG--- 881
+ L+F H IIH V + DF IA+ + D + QT A IG
Sbjct: 127 QALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAI--ADSGNSVXQTAAVIGTAQ 184
Query: 882 YMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLS 927
Y++PE V R DVYS G +L E TG+ P F G+ +S
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGDSPVS 226
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 53/221 (23%), Positives = 102/221 (46%), Gaps = 19/221 (8%)
Query: 711 QAIRRFSYHELLQATDRFSKNNLLGIGSFGSVYVARLQ----DGMEVAVKVFHQRY-ERA 765
QA+R F+ E+ + + K ++G+G FG V RL+ + VA+K Y ++
Sbjct: 2 QAVREFA-KEIDASCIKIEK--VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ 58
Query: 766 LKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQR 825
+ F E +M + H N++ + + +I EYM NGSL+ L + Q
Sbjct: 59 RRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQL 118
Query: 826 LNIMIDVALALEYLH---------FGHSTPIIHYMVAHISDFSIAKFLNGQDQLSMQTQ- 875
+ ++ + ++YL + + +V +SDF +++ L + + T+
Sbjct: 119 VGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRG 178
Query: 876 TLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKP 915
I + APE + ++ DV+SYGI++ E + G++P
Sbjct: 179 GKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 219
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 53/221 (23%), Positives = 102/221 (46%), Gaps = 19/221 (8%)
Query: 711 QAIRRFSYHELLQATDRFSKNNLLGIGSFGSVYVARLQ----DGMEVAVKVFHQRY-ERA 765
QA+R F+ E+ + + K ++G+G FG V RL+ + VA+K Y ++
Sbjct: 17 QAVREFA-KEIDASCIKIEK--VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ 73
Query: 766 LKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQR 825
+ F E +M + H N++ + + +I EYM NGSL+ L + Q
Sbjct: 74 RRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQL 133
Query: 826 LNIMIDVALALEYLH---------FGHSTPIIHYMVAHISDFSIAKFLNGQDQLSMQTQ- 875
+ ++ + ++YL + + +V +SDF +++ L + + T+
Sbjct: 134 VGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRG 193
Query: 876 TLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKP 915
I + APE + ++ DV+SYGI++ E + G++P
Sbjct: 194 GKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 234
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 54/196 (27%), Positives = 94/196 (47%), Gaps = 20/196 (10%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
LG G FG V++ +VAVK Q + +F E +MK+++H+ LV++ + +
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 75
Query: 794 DDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALAL-EYLHFGHSTPIIH--- 849
+ +I EYM NGSL + L + + I +N ++D+A + E + F IH
Sbjct: 76 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRNL 131
Query: 850 ---------YMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVY 900
+ I+DF +A+ + + + + I + APE G + + DV+
Sbjct: 132 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP-IKWTAPEAINYGTFTIKSDVW 190
Query: 901 SYGIMLMETFT-GKKP 915
S+GI+L E T G+ P
Sbjct: 191 SFGILLTEIVTHGRIP 206
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 54/196 (27%), Positives = 94/196 (47%), Gaps = 20/196 (10%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
LG G FG V++ +VAVK Q + +F E +MK+++H+ LV++ + +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 794 DDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALAL-EYLHFGHSTPIIH--- 849
+ +I EYM NGSL + L + + I +N ++D+A + E + F IH
Sbjct: 86 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 141
Query: 850 ---------YMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVY 900
+ I+DF +A+ + + + + I + APE G + + DV+
Sbjct: 142 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP-IKWTAPEAINYGTFTIKSDVW 200
Query: 901 SYGIMLMETFT-GKKP 915
S+GI+L E T G+ P
Sbjct: 201 SFGILLTEIVTHGRIP 216
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 54/196 (27%), Positives = 94/196 (47%), Gaps = 20/196 (10%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
LG G FG V++ +VAVK Q + +F E +MK+++H+ LV++ + +
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 89
Query: 794 DDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALAL-EYLHFGHSTPIIH--- 849
+ +I EYM NGSL + L + + I +N ++D+A + E + F IH
Sbjct: 90 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 145
Query: 850 ---------YMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVY 900
+ I+DF +A+ + + + + I + APE G + + DV+
Sbjct: 146 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP-IKWTAPEAINYGTFTIKSDVW 204
Query: 901 SYGIMLMETFT-GKKP 915
S+GI+L E T G+ P
Sbjct: 205 SFGILLTEIVTHGRIP 220
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 54/196 (27%), Positives = 94/196 (47%), Gaps = 20/196 (10%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
LG G FG V++ +VAVK Q + +F E +MK+++H+ LV++ + +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 794 DDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALAL-EYLHFGHSTPIIH--- 849
+ +I EYM NGSL + L + + I +N ++D+A + E + F IH
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 135
Query: 850 ---------YMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVY 900
+ I+DF +A+ + + + + I + APE G + + DV+
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP-IKWTAPEAINYGTFTIKSDVW 194
Query: 901 SYGIMLMETFT-GKKP 915
S+GI+L E T G+ P
Sbjct: 195 SFGILLTEIVTHGRIP 210
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 54/196 (27%), Positives = 94/196 (47%), Gaps = 20/196 (10%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
LG G FG V++ +VAVK Q + +F E +MK+++H+ LV++ + +
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 74
Query: 794 DDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALAL-EYLHFGHSTPIIH--- 849
+ +I EYM NGSL + L + + I +N ++D+A + E + F IH
Sbjct: 75 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 130
Query: 850 ---------YMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVY 900
+ I+DF +A+ + + + + I + APE G + + DV+
Sbjct: 131 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP-IKWTAPEAINYGTFTIKSDVW 189
Query: 901 SYGIMLMETFT-GKKP 915
S+GI+L E T G+ P
Sbjct: 190 SFGILLTEIVTHGRIP 205
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 54/196 (27%), Positives = 94/196 (47%), Gaps = 20/196 (10%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
LG G FG V++ +VAVK Q + +F E +MK+++H+ LV++ + +
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 84
Query: 794 DDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALAL-EYLHFGHSTPIIH--- 849
+ +I EYM NGSL + L + + I +N ++D+A + E + F IH
Sbjct: 85 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 140
Query: 850 ---------YMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVY 900
+ I+DF +A+ + + + + I + APE G + + DV+
Sbjct: 141 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP-IKWTAPEAINYGTFTIKSDVW 199
Query: 901 SYGIMLMETFT-GKKP 915
S+GI+L E T G+ P
Sbjct: 200 SFGILLTEIVTHGRIP 215
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 64.3 bits (155), Expect = 4e-10, Method: Composition-based stats.
Identities = 54/197 (27%), Positives = 99/197 (50%), Gaps = 16/197 (8%)
Query: 734 LGIGSFGSVY--VARL-QDGMEVAVKVFHQRYERA-LKSFQDECEVMKRIRHRNLVKIIS 789
LG G+FGSV V R+ + ++VA+KV Q E+A + E ++M ++ + +V++I
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 790 ACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYL---HFGH--- 843
C + L+ME G L L + + ++ V++ ++YL +F H
Sbjct: 78 VCQAEAL-MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDL 136
Query: 844 ---STPIIHYMVAHISDFSIAKFLNGQDQL-SMQTQTLATIGYMAPEYGVQGRVSTRGDV 899
+ +++ A ISDF ++K L D + ++ + + APE + S+R DV
Sbjct: 137 AARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDV 196
Query: 900 YSYGIMLMETFT-GKKP 915
+SYG+ + E + G+KP
Sbjct: 197 WSYGVTMWEALSYGQKP 213
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 116/297 (39%), Gaps = 65/297 (21%)
Query: 728 FSKNNL-----LGIGSFGSVYVAR------LQDGMEVAVKVFHQRYERALKS-FQDECEV 775
+ +NN+ +G G+FG V+ AR + VAVK+ + +++ FQ E +
Sbjct: 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAAL 103
Query: 776 MKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYS-------------------- 815
M + N+VK++ C+ L+ EYM G L L S
Sbjct: 104 MAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARV 163
Query: 816 ---GTCMLDIFQRLNIMIDVALALEYL---HFGH------STPIIHYMVAHISDFSIAKF 863
G L ++L I VA + YL F H + + MV I+DF +++
Sbjct: 164 SSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRN 223
Query: 864 LNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIG 922
+ D I +M PE R +T DV++YG++L E F+ G +P +
Sbjct: 224 IYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHE 283
Query: 923 ELSLSRWVNDLLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKR 979
E+ + V D N+L A E L + NL C + P R
Sbjct: 284 EV-------------IYYVRDGNIL-------ACPENCPLELYNLMRLCWSKLPADR 320
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 97/203 (47%), Gaps = 23/203 (11%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFH--QRYERALKSFQDECEVMKRIRHRNLVKIISAC 791
+G GSFG+VY + +VAVK+ + + L++F++E V+++ RH N++ +
Sbjct: 21 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 792 SNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHY- 850
+ A++ ++ SL + L+ ++ + ++I A ++YL H+ IIH
Sbjct: 79 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL---HAKSIIHRD 134
Query: 851 -----------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEY-GVQGR--VSTR 896
+ I DF +A + Q +I +MAPE +Q + S +
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 194
Query: 897 GDVYSYGIMLMETFTGKKPTDEI 919
DVY++GI+L E TG+ P I
Sbjct: 195 SDVYAFGIVLYELMTGQLPYSNI 217
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.5 bits (153), Expect = 5e-10, Method: Composition-based stats.
Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 49/241 (20%)
Query: 726 DRFSKNNLLGIGSFGSVYVA--------RLQDGMEVAVKVFHQ-RYERALKSFQDECEVM 776
D+ + LG G+FG V +A + ++ + VAVK+ E+ L E E+M
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 777 KRI-RHRNLVKIISACSNDDFKALIMEYMPNGSLENRL---------YSGTCMLDI---- 822
K I +H+N++ ++ AC+ D +I+ Y G+L L YS DI
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYS----YDINRVP 150
Query: 823 -----FQRL-NIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFL 864
F+ L + +A +EYL S IH +A I+DF +A+ +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 865 NGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGE 923
N D T + +MAPE + + DV+S+G+++ E FT G P I + E
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 924 L 924
L
Sbjct: 268 L 268
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 97/203 (47%), Gaps = 23/203 (11%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFH--QRYERALKSFQDECEVMKRIRHRNLVKIISAC 791
+G GSFG+VY + +VAVK+ + + L++F++E V+++ RH N++ +
Sbjct: 18 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 792 SNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHY- 850
+ A++ ++ SL + L+ ++ + ++I A ++YL H+ IIH
Sbjct: 76 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL---HAKSIIHRD 131
Query: 851 -----------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEY-GVQGR--VSTR 896
+ I DF +A + Q +I +MAPE +Q + S +
Sbjct: 132 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 191
Query: 897 GDVYSYGIMLMETFTGKKPTDEI 919
DVY++GI+L E TG+ P I
Sbjct: 192 SDVYAFGIVLYELMTGQLPYSNI 214
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 97/203 (47%), Gaps = 23/203 (11%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFH--QRYERALKSFQDECEVMKRIRHRNLVKIISAC 791
+G GSFG+VY + +VAVK+ + + L++F++E V+++ RH N++ +
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 792 SNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHY- 850
+ A++ ++ SL + L+ ++ + ++I A ++YL H+ IIH
Sbjct: 74 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL---HAKSIIHRD 129
Query: 851 -----------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEY-GVQGR--VSTR 896
+ I DF +A + Q +I +MAPE +Q + S +
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 897 GDVYSYGIMLMETFTGKKPTDEI 919
DVY++GI+L E TG+ P I
Sbjct: 190 SDVYAFGIVLYELMTGQLPYSNI 212
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 97/203 (47%), Gaps = 23/203 (11%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFH--QRYERALKSFQDECEVMKRIRHRNLVKIISAC 791
+G GSFG+VY + +VAVK+ + + L++F++E V+++ RH N++ +
Sbjct: 21 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 792 SNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHY- 850
+ A++ ++ SL + L+ ++ + ++I A ++YL H+ IIH
Sbjct: 79 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL---HAKSIIHRD 134
Query: 851 -----------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEY-GVQGR--VSTR 896
+ I DF +A + Q +I +MAPE +Q + S +
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 194
Query: 897 GDVYSYGIMLMETFTGKKPTDEI 919
DVY++GI+L E TG+ P I
Sbjct: 195 SDVYAFGIVLYELMTGQLPYSNI 217
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 104/237 (43%), Gaps = 41/237 (17%)
Query: 726 DRFSKNNLLGIGSFGSVYVARL----QDG----MEVAVKVFH-QRYERALKSFQDECEVM 776
DR LG G+FG V +A +D +VAVK+ E+ L E E+M
Sbjct: 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 128
Query: 777 KRI-RHRNLVKIISACSNDDFKALIMEYMPNGSLENRL---------YSGTCMLDIFQRL 826
K I +H+N++ ++ AC+ D +I+EY G+L L YS + ++L
Sbjct: 129 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 188
Query: 827 N------IMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQD 868
+ VA +EYL S IH +A I+DF +A+ ++ D
Sbjct: 189 SSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 245
Query: 869 QLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGEL 924
T + +MAPE + + DV+S+G++L E FT G P + + EL
Sbjct: 246 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 302
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 63.2 bits (152), Expect = 7e-10, Method: Composition-based stats.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 33/226 (14%)
Query: 725 TDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRYERALK---SFQDECEVMKRIR 780
+DR+ +LG G V++AR L+ +VAVKV R F+ E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 781 HRNLVKIISACSNDD----FKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALAL 836
H +V + + + ++MEY+ +L + +++ M + + ++ D A
Sbjct: 71 HPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPK-RAIEVIAD---AC 126
Query: 837 EYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLSMQTQTLATIG--- 881
+ L+F H IIH V + DF IA+ + D + TQT A IG
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI--ADSGNSVTQTAAVIGTAQ 184
Query: 882 YMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLS 927
Y++PE V R DVYS G +L E TG+ P F G+ +S
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGDSPVS 226
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 63.2 bits (152), Expect = 7e-10, Method: Composition-based stats.
Identities = 57/196 (29%), Positives = 93/196 (47%), Gaps = 20/196 (10%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
LG G FG V++A +VAVK + ++++F E VMK ++H LVK+ + +
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 81
Query: 794 DDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALAL-EYLHFGHSTPIIHY-- 850
+ +I E+M GSL + L S Q L +ID + + E + F IH
Sbjct: 82 EPI-YIITEFMAKGSLLDFLKSDEGSK---QPLPKLIDFSAQIAEGMAFIEQRNYIHRDL 137
Query: 851 ----------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVY 900
+V I+DF +A+ + + + + I + APE G + + DV+
Sbjct: 138 RAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFP-IKWTAPEAINFGSFTIKSDVW 196
Query: 901 SYGIMLMETFT-GKKP 915
S+GI+LME T G+ P
Sbjct: 197 SFGILLMEIVTYGRIP 212
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.2 bits (152), Expect = 7e-10, Method: Composition-based stats.
Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 49/241 (20%)
Query: 726 DRFSKNNLLGIGSFGSVYVA--------RLQDGMEVAVKVFHQ-RYERALKSFQDECEVM 776
D+ + LG G+FG V +A + ++ + VAVK+ E+ L E E+M
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 777 KRI-RHRNLVKIISACSNDDFKALIMEYMPNGSLENRL---------YSGTCMLDI---- 822
K I +H+N++ ++ AC+ D +I+ Y G+L L YS DI
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYS----YDINRVP 150
Query: 823 -----FQRL-NIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFL 864
F+ L + +A +EYL S IH +A I+DF +A+ +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 865 NGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGE 923
N D T + +MAPE + + DV+S+G+++ E FT G P I + E
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 924 L 924
L
Sbjct: 268 L 268
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 97/203 (47%), Gaps = 23/203 (11%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFH--QRYERALKSFQDECEVMKRIRHRNLVKIISAC 791
+G GSFG+VY + +VAVK+ + + L++F++E V+++ RH N++ +
Sbjct: 44 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 792 SNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHY- 850
+ A++ ++ SL + L+ ++ + ++I A ++YL H+ IIH
Sbjct: 102 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL---HAKSIIHRD 157
Query: 851 -----------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEY-GVQGR--VSTR 896
+ I DF +A + Q +I +MAPE +Q + S +
Sbjct: 158 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 217
Query: 897 GDVYSYGIMLMETFTGKKPTDEI 919
DVY++GI+L E TG+ P I
Sbjct: 218 SDVYAFGIVLYELMTGQLPYSNI 240
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 97/203 (47%), Gaps = 23/203 (11%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFH--QRYERALKSFQDECEVMKRIRHRNLVKIISAC 791
+G GSFG+VY + +VAVK+ + + L++F++E V+++ RH N++ +
Sbjct: 43 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 792 SNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHY- 850
+ A++ ++ SL + L+ ++ + ++I A ++YL H+ IIH
Sbjct: 101 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL---HAKSIIHRD 156
Query: 851 -----------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEY-GVQGR--VSTR 896
+ I DF +A + Q +I +MAPE +Q + S +
Sbjct: 157 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 216
Query: 897 GDVYSYGIMLMETFTGKKPTDEI 919
DVY++GI+L E TG+ P I
Sbjct: 217 SDVYAFGIVLYELMTGQLPYSNI 239
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 100/201 (49%), Gaps = 16/201 (7%)
Query: 734 LGIGSFGSVY--VARLQDG-MEVAVKVFHQRYERA-LKSFQDECEVMKRIRHRNLVKIIS 789
LG G+FGSV V R++ ++VA+KV Q E+A + E ++M ++ + +V++I
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 790 ACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH---FGH--- 843
C + L+ME G L L + + ++ V++ ++YL F H
Sbjct: 404 VCQAEAL-MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNL 462
Query: 844 ---STPIIHYMVAHISDFSIAKFLNGQDQL-SMQTQTLATIGYMAPEYGVQGRVSTRGDV 899
+ +++ A ISDF ++K L D + ++ + + APE + S+R DV
Sbjct: 463 AARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDV 522
Query: 900 YSYGIMLMETFT-GKKPTDEI 919
+SYG+ + E + G+KP ++
Sbjct: 523 WSYGVTMWEALSYGQKPYKKM 543
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 98/202 (48%), Gaps = 20/202 (9%)
Query: 727 RFSKNNLLGIGSFGSVYVA-RLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLV 785
++++ +G G+ G+VY A + G EVA++ + + + + +E VM+ ++ N+V
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 80
Query: 786 KIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHST 845
+ + D ++MEY+ GSL + + + TCM D Q + + ALE+L HS
Sbjct: 81 NYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCM-DEGQIAAVCRECLQALEFL---HSN 135
Query: 846 PIIHYMV------------AHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRV 893
+IH + ++DF + + S +++ + T +MAPE +
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--SKRSEMVGTPYWMAPEVVTRKAY 193
Query: 894 STRGDVYSYGIMLMETFTGKKP 915
+ D++S GIM +E G+ P
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPP 215
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 97/203 (47%), Gaps = 23/203 (11%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFH--QRYERALKSFQDECEVMKRIRHRNLVKIISAC 791
+G GSFG+VY + +VAVK+ + + L++F++E V+++ RH N++ +
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 792 SNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHY- 850
+ A++ ++ SL + L+ ++ + ++I A ++YL H+ IIH
Sbjct: 74 TAPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL---HAKSIIHRD 129
Query: 851 -----------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEY-GVQGR--VSTR 896
+ I DF +A + Q +I +MAPE +Q + S +
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 897 GDVYSYGIMLMETFTGKKPTDEI 919
DVY++GI+L E TG+ P I
Sbjct: 190 SDVYAFGIVLYELMTGQLPYSNI 212
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 97/203 (47%), Gaps = 23/203 (11%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFH--QRYERALKSFQDECEVMKRIRHRNLVKIISAC 791
+G GSFG+VY + +VAVK+ + + L++F++E V+++ RH N++ +
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 792 SNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHY- 850
+ A++ ++ SL + L+ ++ + ++I A ++YL H+ IIH
Sbjct: 74 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL---HAKSIIHRD 129
Query: 851 -----------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEY-GVQGR--VSTR 896
+ I DF +A + Q +I +MAPE +Q + S +
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 897 GDVYSYGIMLMETFTGKKPTDEI 919
DVY++GI+L E TG+ P I
Sbjct: 190 SDVYAFGIVLYELMTGQLPYSNI 212
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 62.8 bits (151), Expect = 1e-09, Method: Composition-based stats.
Identities = 62/226 (27%), Positives = 99/226 (43%), Gaps = 33/226 (14%)
Query: 725 TDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRYERALK---SFQDECEVMKRIR 780
+DR+ +LG G V++AR L+ +VAVKV R F+ E + +
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 87
Query: 781 HRNLVKIISACSNDD----FKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALAL 836
H +V + + ++MEY+ +L + +++ M + + ++ D A
Sbjct: 88 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPK-RAIEVIAD---AC 143
Query: 837 EYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLSMQTQTLATIG--- 881
+ L+F H IIH V + DF IA+ + D + TQT A IG
Sbjct: 144 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI--ADSGNSVTQTAAVIGTAQ 201
Query: 882 YMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLS 927
Y++PE V R DVYS G +L E TG+ P F G+ +S
Sbjct: 202 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGDSPVS 243
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 62.8 bits (151), Expect = 1e-09, Method: Composition-based stats.
Identities = 62/226 (27%), Positives = 99/226 (43%), Gaps = 33/226 (14%)
Query: 725 TDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRYERALK---SFQDECEVMKRIR 780
+DR+ +LG G V++AR L+ +VAVKV R F+ E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 781 HRNLVKIISACSNDD----FKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALAL 836
H +V + + ++MEY+ +L + +++ M + + ++ D A
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPK-RAIEVIAD---AC 126
Query: 837 EYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLSMQTQTLATIG--- 881
+ L+F H IIH V + DF IA+ + D + TQT A IG
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI--ADSGNSVTQTAAVIGTAQ 184
Query: 882 YMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLS 927
Y++PE V R DVYS G +L E TG+ P F G+ +S
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGDSPVS 226
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 95/203 (46%), Gaps = 23/203 (11%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFH--QRYERALKSFQDECEVMKRIRHRNLVKIISAC 791
+G GSFG+VY + +VAVK+ + + L++F++E V+++ RH N++ +
Sbjct: 20 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 792 SNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYM 851
+ A++ ++ SL + L++ ++ + ++I A ++YL H+ IIH
Sbjct: 78 TKPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYL---HAKSIIHRD 133
Query: 852 V------------AHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPE---YGVQGRVSTR 896
+ I DF +A + Q +I +MAPE S +
Sbjct: 134 LKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 193
Query: 897 GDVYSYGIMLMETFTGKKPTDEI 919
DVY++GI+L E TG+ P I
Sbjct: 194 SDVYAFGIVLYELMTGQLPYSNI 216
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 97/203 (47%), Gaps = 23/203 (11%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFH--QRYERALKSFQDECEVMKRIRHRNLVKIISAC 791
+G GSFG+VY + +VAVK+ + + L++F++E V+++ RH N++ +
Sbjct: 36 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 792 SNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHY- 850
+ A++ ++ SL + L+ ++ + ++I A ++YL H+ IIH
Sbjct: 94 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL---HAKSIIHRD 149
Query: 851 -----------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEY-GVQGR--VSTR 896
+ I DF +A + Q +I +MAPE +Q + S +
Sbjct: 150 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 209
Query: 897 GDVYSYGIMLMETFTGKKPTDEI 919
DVY++GI+L E TG+ P I
Sbjct: 210 SDVYAFGIVLYELMTGQLPYSNI 232
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 92/196 (46%), Gaps = 20/196 (10%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
LG G FG V++A +VAVK ++++F E VMK ++H LVK+ + +
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 254
Query: 794 DDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALAL-EYLHFGHSTPIIHY-- 850
+ +I E+M GSL + L S Q L +ID + + E + F IH
Sbjct: 255 EPI-YIITEFMAKGSLLDFLKSDEGSK---QPLPKLIDFSAQIAEGMAFIEQRNYIHRDL 310
Query: 851 ----------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVY 900
+V I+DF +A+ + + + + I + APE G + + DV+
Sbjct: 311 RAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFP-IKWTAPEAINFGSFTIKSDVW 369
Query: 901 SYGIMLMETFT-GKKP 915
S+GI+LME T G+ P
Sbjct: 370 SFGILLMEIVTYGRIP 385
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 97/203 (47%), Gaps = 23/203 (11%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFH--QRYERALKSFQDECEVMKRIRHRNLVKIISAC 791
+G GSFG+VY + +VAVK+ + + L++F++E V+++ RH N++ +
Sbjct: 44 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 792 SNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHY- 850
+ A++ ++ SL + L+ ++ + ++I A ++YL H+ IIH
Sbjct: 102 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL---HAKSIIHRD 157
Query: 851 -----------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEY-GVQGR--VSTR 896
+ I DF +A + Q +I +MAPE +Q + S +
Sbjct: 158 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 217
Query: 897 GDVYSYGIMLMETFTGKKPTDEI 919
DVY++GI+L E TG+ P I
Sbjct: 218 SDVYAFGIVLYELMTGQLPYSNI 240
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 54/206 (26%), Positives = 99/206 (48%), Gaps = 15/206 (7%)
Query: 722 LQATDRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQDECEVMKRIR 780
++ TD K+ L G G +G VY + + VAVK + ++ F E VMK I+
Sbjct: 15 MERTDITMKHKLGG-GQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIK 72
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCM-LDIFQRLNIMIDVALALEYL 839
H NLV+++ C+ + +I+E+M G+L + L ++ L + ++ A+EYL
Sbjct: 73 HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 840 ---HFGH------STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQ 890
+F H + + + ++DF +++ + G D + I + APE
Sbjct: 133 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAY 191
Query: 891 GRVSTRGDVYSYGIMLMETFT-GKKP 915
+ S + DV+++G++L E T G P
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSP 217
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 20/204 (9%)
Query: 722 LQATDRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQDECEVMKRIR 780
++ TD + + LG G +G VY + + VAVK + ++ F E VMK I+
Sbjct: 214 MERTD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIK 271
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRLYS-GTCMLDIFQRLNIMIDVALALEYL 839
H NLV+++ C+ + +I E+M G+L + L ++ L + ++ A+EYL
Sbjct: 272 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 331
Query: 840 HFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEY 887
IH +A ++DF +++ + G D + I + APE
Sbjct: 332 ---EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPES 387
Query: 888 GVQGRVSTRGDVYSYGIMLMETFT 911
+ S + DV+++G++L E T
Sbjct: 388 LAYNKFSIKSDVWAFGVLLWEIAT 411
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 25/211 (11%)
Query: 722 LQATDRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQDECEVMKRIR 780
++ TD K+ L G G FG VY + + VAVK + ++ F E VMK I+
Sbjct: 8 MERTDITMKHKLGG-GQFGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIK 65
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLE------NRLYSGTCMLDIFQRLNIMIDVAL 834
H NLV+++ C+ + +I E+M G+L NR +L L + ++
Sbjct: 66 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISS 120
Query: 835 ALEYL---HFGH------STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAP 885
A+EYL +F H + + + ++DF +++ + G D + I + AP
Sbjct: 121 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAP 179
Query: 886 EYGVQGRVSTRGDVYSYGIMLMETFT-GKKP 915
E + S + DV+++G++L E T G P
Sbjct: 180 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 210
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 54/206 (26%), Positives = 99/206 (48%), Gaps = 15/206 (7%)
Query: 722 LQATDRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQDECEVMKRIR 780
++ TD K+ L G G +G VY + + VAVK + ++ F E VMK I+
Sbjct: 11 MERTDITMKHKLGG-GQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIK 68
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCM-LDIFQRLNIMIDVALALEYL 839
H NLV+++ C+ + +I+E+M G+L + L ++ L + ++ A+EYL
Sbjct: 69 HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 128
Query: 840 ---HFGH------STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQ 890
+F H + + + ++DF +++ + G D + I + APE
Sbjct: 129 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAY 187
Query: 891 GRVSTRGDVYSYGIMLMETFT-GKKP 915
+ S + DV+++G++L E T G P
Sbjct: 188 NKFSIKSDVWAFGVLLWEIATYGMSP 213
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 50/193 (25%), Positives = 94/193 (48%), Gaps = 13/193 (6%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
LG G FG V++ + +VAVK + ++++F +E +MK ++H LV++ + +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 794 DDFKALIMEYMPNGSLENRLYS---GTCMLDIFQRLNIMIDVALAL----EYLH---FGH 843
++ +I E+M GSL + L S G +L + I +A Y+H
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAA 138
Query: 844 STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYG 903
+ + ++ I+DF +A+ + + + + I + APE G + + +V+S+G
Sbjct: 139 NVLVSESLMCKIADFGLARVIEDNEYTAREGAKFP-IKWTAPEAINFGCFTIKSNVWSFG 197
Query: 904 IMLMETFT-GKKP 915
I+L E T GK P
Sbjct: 198 ILLYEIVTYGKIP 210
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 18/205 (8%)
Query: 724 ATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKV-FHQRYERALKSFQ--DECEVMKRI 779
A + F LG G FG+VY+AR Q +A+KV F + E+A Q E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 780 RHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYL 839
RH N++++ + LI+EY P G++ L D + + ++A AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 124
Query: 840 HFGHSTPIIH-------YMVAHISDFSIAKF-LNGQDQLSMQTQTLATIGYMAPEYGVQG 891
HS +IH ++ + IA F + S +T+ T+ Y+ PE ++G
Sbjct: 125 ---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELCGTLDYLPPEM-IEG 180
Query: 892 RV-STRGDVYSYGIMLMETFTGKKP 915
R+ + D++S G++ E GK P
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 20/204 (9%)
Query: 722 LQATDRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQDECEVMKRIR 780
++ TD + + LG G +G VY + + VAVK + ++ F E VMK I+
Sbjct: 256 MERTD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIK 313
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRLYS-GTCMLDIFQRLNIMIDVALALEYL 839
H NLV+++ C+ + +I E+M G+L + L ++ L + ++ A+EYL
Sbjct: 314 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 373
Query: 840 HFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEY 887
IH +A ++DF +++ + G D + I + APE
Sbjct: 374 ---EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPES 429
Query: 888 GVQGRVSTRGDVYSYGIMLMETFT 911
+ S + DV+++G++L E T
Sbjct: 430 LAYNKFSIKSDVWAFGVLLWEIAT 453
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 63/237 (26%), Positives = 101/237 (42%), Gaps = 41/237 (17%)
Query: 726 DRFSKNNLLGIGSFGSVYVA--------RLQDGMEVAVKVFHQ-RYERALKSFQDECEVM 776
DR LG G+FG V +A + +VAVK+ E+ L E E+M
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 777 KRI-RHRNLVKIISACSNDDFKALIMEYMPNGSLENRL---------------YSGTCML 820
K I +H+N++ ++ AC+ D +I+EY G+L L ++ L
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQL 147
Query: 821 DIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQD 868
++ VA +EYL S IH +A I+DF +A+ ++ D
Sbjct: 148 SSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 204
Query: 869 QLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGEL 924
T + +MAPE + + DV+S+G++L E FT G P + + EL
Sbjct: 205 XXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 261
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 47/199 (23%), Positives = 91/199 (45%), Gaps = 16/199 (8%)
Query: 733 LLGIGSFGSVYVARLQ----DGMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVKI 787
++G+G FG V RL+ + VA+K Y ++ + F E +M + H N++ +
Sbjct: 15 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 74
Query: 788 ISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH------- 840
+ +I EYM NGSL+ L + Q + ++ + ++YL
Sbjct: 75 EGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVHR 134
Query: 841 --FGHSTPIIHYMVAHISDFSIAKFLNGQDQLSMQTQ-TLATIGYMAPEYGVQGRVSTRG 897
+ + +V +SDF +++ L + + T+ I + APE + ++
Sbjct: 135 DLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSAS 194
Query: 898 DVYSYGIMLMETFT-GKKP 915
DV+SYGI++ E + G++P
Sbjct: 195 DVWSYGIVMWEVMSYGERP 213
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 97/202 (48%), Gaps = 20/202 (9%)
Query: 727 RFSKNNLLGIGSFGSVYVA-RLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLV 785
++++ +G G+ G+VY A + G EVA++ + + + + +E VM+ ++ N+V
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 81
Query: 786 KIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHST 845
+ + D ++MEY+ GSL + + + TCM D Q + + ALE+L HS
Sbjct: 82 NYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCM-DEGQIAAVCRECLQALEFL---HSN 136
Query: 846 PIIHYMV------------AHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRV 893
+IH + ++DF + + S ++ + T +MAPE +
Sbjct: 137 QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQ--SKRSTMVGTPYWMAPEVVTRKAY 194
Query: 894 STRGDVYSYGIMLMETFTGKKP 915
+ D++S GIM +E G+ P
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 97/202 (48%), Gaps = 20/202 (9%)
Query: 727 RFSKNNLLGIGSFGSVYVA-RLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLV 785
++++ +G G+ G+VY A + G EVA++ + + + + +E VM+ ++ N+V
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 80
Query: 786 KIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHST 845
+ + D ++MEY+ GSL + + + TCM D Q + + ALE+L HS
Sbjct: 81 NYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCM-DEGQIAAVCRECLQALEFL---HSN 135
Query: 846 PIIHYMV------------AHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRV 893
+IH + ++DF + + S ++ + T +MAPE +
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--SKRSXMVGTPYWMAPEVVTRKAY 193
Query: 894 STRGDVYSYGIMLMETFTGKKP 915
+ D++S GIM +E G+ P
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 97/202 (48%), Gaps = 20/202 (9%)
Query: 727 RFSKNNLLGIGSFGSVYVA-RLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLV 785
++++ +G G+ G+VY A + G EVA++ + + + + +E VM+ ++ N+V
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 81
Query: 786 KIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHST 845
+ + D ++MEY+ GSL + + + TCM D Q + + ALE+L HS
Sbjct: 82 NYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCM-DEGQIAAVCRECLQALEFL---HSN 136
Query: 846 PIIHYMV------------AHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRV 893
+IH + ++DF + + S ++ + T +MAPE +
Sbjct: 137 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--SKRSXMVGTPYWMAPEVVTRKAY 194
Query: 894 STRGDVYSYGIMLMETFTGKKP 915
+ D++S GIM +E G+ P
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPP 216
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 65/237 (27%), Positives = 103/237 (43%), Gaps = 41/237 (17%)
Query: 726 DRFSKNNLLGIGSFGSVYVA--------RLQDGMEVAVKVFHQ-RYERALKSFQDECEVM 776
DR LG G+FG V +A + +VAVK+ E+ L E E+M
Sbjct: 20 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 79
Query: 777 KRI-RHRNLVKIISACSNDDFKALIMEYMPNGSLENRL---------YSGTCMLDIFQRL 826
K I +H+N++ ++ AC+ D +I+EY G+L L YS + ++L
Sbjct: 80 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 139
Query: 827 N------IMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQD 868
+ VA +EYL S IH +A I+DF +A+ ++ D
Sbjct: 140 SSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 196
Query: 869 QLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGEL 924
T + +MAPE + + DV+S+G++L E FT G P + + EL
Sbjct: 197 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 253
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 65/237 (27%), Positives = 103/237 (43%), Gaps = 41/237 (17%)
Query: 726 DRFSKNNLLGIGSFGSVYVA--------RLQDGMEVAVKVFHQ-RYERALKSFQDECEVM 776
DR LG G+FG V +A + +VAVK+ E+ L E E+M
Sbjct: 17 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 76
Query: 777 KRI-RHRNLVKIISACSNDDFKALIMEYMPNGSLENRL---------YSGTCMLDIFQRL 826
K I +H+N++ ++ AC+ D +I+EY G+L L YS + ++L
Sbjct: 77 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 136
Query: 827 N------IMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQD 868
+ VA +EYL S IH +A I+DF +A+ ++ D
Sbjct: 137 SSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 193
Query: 869 QLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGEL 924
T + +MAPE + + DV+S+G++L E FT G P + + EL
Sbjct: 194 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 250
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 65/237 (27%), Positives = 103/237 (43%), Gaps = 41/237 (17%)
Query: 726 DRFSKNNLLGIGSFGSVYVA--------RLQDGMEVAVKVFHQ-RYERALKSFQDECEVM 776
DR LG G+FG V +A + +VAVK+ E+ L E E+M
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 777 KRI-RHRNLVKIISACSNDDFKALIMEYMPNGSLENRL---------YSGTCMLDIFQRL 826
K I +H+N++ ++ AC+ D +I+EY G+L L YS + ++L
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQL 147
Query: 827 N------IMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQD 868
+ VA +EYL S IH +A I+DF +A+ ++ D
Sbjct: 148 SSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 204
Query: 869 QLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGEL 924
T + +MAPE + + DV+S+G++L E FT G P + + EL
Sbjct: 205 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 261
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 65/237 (27%), Positives = 103/237 (43%), Gaps = 41/237 (17%)
Query: 726 DRFSKNNLLGIGSFGSVYVA--------RLQDGMEVAVKVFHQ-RYERALKSFQDECEVM 776
DR LG G+FG V +A + +VAVK+ E+ L E E+M
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 777 KRI-RHRNLVKIISACSNDDFKALIMEYMPNGSLENRL---------YSGTCMLDIFQRL 826
K I +H+N++ ++ AC+ D +I+EY G+L L YS + ++L
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 147
Query: 827 N------IMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQD 868
+ VA +EYL S IH +A I+DF +A+ ++ D
Sbjct: 148 SSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 204
Query: 869 QLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGEL 924
T + +MAPE + + DV+S+G++L E FT G P + + EL
Sbjct: 205 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 261
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 65/237 (27%), Positives = 103/237 (43%), Gaps = 41/237 (17%)
Query: 726 DRFSKNNLLGIGSFGSVYVA--------RLQDGMEVAVKVFHQ-RYERALKSFQDECEVM 776
DR LG G+FG V +A + +VAVK+ E+ L E E+M
Sbjct: 21 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 80
Query: 777 KRI-RHRNLVKIISACSNDDFKALIMEYMPNGSLENRL---------YSGTCMLDIFQRL 826
K I +H+N++ ++ AC+ D +I+EY G+L L YS + ++L
Sbjct: 81 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 140
Query: 827 N------IMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQD 868
+ VA +EYL S IH +A I+DF +A+ ++ D
Sbjct: 141 SSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 197
Query: 869 QLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGEL 924
T + +MAPE + + DV+S+G++L E FT G P + + EL
Sbjct: 198 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 254
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 97/202 (48%), Gaps = 20/202 (9%)
Query: 727 RFSKNNLLGIGSFGSVYVA-RLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLV 785
++++ +G G+ G+VY A + G EVA++ + + + + +E VM+ ++ N+V
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 80
Query: 786 KIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHST 845
+ + D ++MEY+ GSL + + + TCM D Q + + ALE+L HS
Sbjct: 81 NYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCM-DEGQIAAVCRECLQALEFL---HSN 135
Query: 846 PIIHYMV------------AHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRV 893
+IH + ++DF + + S ++ + T +MAPE +
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--SKRSTMVGTPYWMAPEVVTRKAY 193
Query: 894 STRGDVYSYGIMLMETFTGKKP 915
+ D++S GIM +E G+ P
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPP 215
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 95/203 (46%), Gaps = 23/203 (11%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFH--QRYERALKSFQDECEVMKRIRHRNLVKIISAC 791
+G GSFG+VY + +VAVK+ + + L++F++E V+++ RH N++ +
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 792 SNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYM 851
+ A++ ++ SL + L++ ++ + ++I A ++YL H+ IIH
Sbjct: 90 TKPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYL---HAKSIIHRD 145
Query: 852 V------------AHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPE---YGVQGRVSTR 896
+ I DF +A + Q +I +MAPE S +
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205
Query: 897 GDVYSYGIMLMETFTGKKPTDEI 919
DVY++GI+L E TG+ P I
Sbjct: 206 SDVYAFGIVLYELMTGQLPYSNI 228
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 32/206 (15%)
Query: 732 NLLGIGSFGSVYVARLQ-DG--MEVAVKVFHQRYERA-LKSFQDECEVMKRI-RHRNLVK 786
+++G G+FG V AR++ DG M+ A+K + + + F E EV+ ++ H N++
Sbjct: 28 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 87
Query: 787 IISACSNDDFKALIMEYMPNGSLENRLY---------------SGTCMLDIFQRLNIMID 831
++ AC + + L +EY P+G+L + L S L Q L+ D
Sbjct: 88 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 147
Query: 832 VALALEYL---HFGH------STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGY 882
VA ++YL F H + + VA I+DF +++ GQ+ +T + +
Sbjct: 148 VARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRLPVRW 204
Query: 883 MAPEYGVQGRVSTRGDVYSYGIMLME 908
MA E +T DV+SYG++L E
Sbjct: 205 MAIESLNYSVYTTNSDVWSYGVLLWE 230
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 32/206 (15%)
Query: 732 NLLGIGSFGSVYVARLQ-DG--MEVAVKVFHQRYERA-LKSFQDECEVMKRI-RHRNLVK 786
+++G G+FG V AR++ DG M+ A+K + + + F E EV+ ++ H N++
Sbjct: 21 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 80
Query: 787 IISACSNDDFKALIMEYMPNGSLENRLY---------------SGTCMLDIFQRLNIMID 831
++ AC + + L +EY P+G+L + L S L Q L+ D
Sbjct: 81 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 140
Query: 832 VALALEYL---HFGH------STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGY 882
VA ++YL F H + + VA I+DF +++ GQ+ +T + +
Sbjct: 141 VARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRLPVRW 197
Query: 883 MAPEYGVQGRVSTRGDVYSYGIMLME 908
MA E +T DV+SYG++L E
Sbjct: 198 MAIESLNYSVYTTNSDVWSYGVLLWE 223
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 32/206 (15%)
Query: 732 NLLGIGSFGSVYVARLQ-DG--MEVAVKVFHQRYERA-LKSFQDECEVMKRI-RHRNLVK 786
+++G G+FG V AR++ DG M+ A+K + + + F E EV+ ++ H N++
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 90
Query: 787 IISACSNDDFKALIMEYMPNGSLENRLY---------------SGTCMLDIFQRLNIMID 831
++ AC + + L +EY P+G+L + L S L Q L+ D
Sbjct: 91 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 150
Query: 832 VALALEYL---HFGH------STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGY 882
VA ++YL F H + + VA I+DF +++ GQ+ +T + +
Sbjct: 151 VARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRLPVRW 207
Query: 883 MAPEYGVQGRVSTRGDVYSYGIMLME 908
MA E +T DV+SYG++L E
Sbjct: 208 MAIESLNYSVYTTNSDVWSYGVLLWE 233
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 724 ATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKV-FHQRYERALKSFQ--DECEVMKRI 779
A + F LG G FG+VY+AR Q +A+KV F + E+A Q E E+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 780 RHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYL 839
RH N++++ + LI+EY P G + L D + + ++A AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL-QKLSKFDEQRTATYITELANALSYC 129
Query: 840 HFGHSTPIIH-------YMVAHISDFSIAKF-LNGQDQLSMQTQTLATIGYMAPEYGVQG 891
HS +IH ++ + IA F + S +T T+ Y+ PE ++G
Sbjct: 130 ---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM-IEG 185
Query: 892 RV-STRGDVYSYGIMLMETFTGKKP 915
R+ + D++S G++ E GK P
Sbjct: 186 RMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 63/237 (26%), Positives = 101/237 (42%), Gaps = 41/237 (17%)
Query: 726 DRFSKNNLLGIGSFGSVYVA--------RLQDGMEVAVKVFHQ-RYERALKSFQDECEVM 776
DR LG G+FG V +A + +VAVK+ E+ L E E+M
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 777 KRI-RHRNLVKIISACSNDDFKALIMEYMPNGSLENRL---------------YSGTCML 820
K I +H+N++ ++ AC+ D +I+EY G+L L ++ L
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQL 147
Query: 821 DIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQD 868
++ VA +EYL S IH +A I+DF +A+ ++ D
Sbjct: 148 SSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 204
Query: 869 QLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGEL 924
T + +MAPE + + DV+S+G++L E FT G P + + EL
Sbjct: 205 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 261
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 63/237 (26%), Positives = 101/237 (42%), Gaps = 41/237 (17%)
Query: 726 DRFSKNNLLGIGSFGSVYVA--------RLQDGMEVAVKVFHQ-RYERALKSFQDECEVM 776
DR LG G+FG V +A + +VAVK+ E+ L E E+M
Sbjct: 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 72
Query: 777 KRI-RHRNLVKIISACSNDDFKALIMEYMPNGSLENRL---------------YSGTCML 820
K I +H+N++ ++ AC+ D +I+EY G+L L ++ L
Sbjct: 73 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQL 132
Query: 821 DIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQD 868
++ VA +EYL S IH +A I+DF +A+ ++ D
Sbjct: 133 SSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 189
Query: 869 QLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGEL 924
T + +MAPE + + DV+S+G++L E FT G P + + EL
Sbjct: 190 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 246
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 722 LQATDRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQDECEVMKRIR 780
++ TD + + LG G +G VY + + VAVK + ++ F E VMK I+
Sbjct: 217 MERTD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIK 274
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRLYS-GTCMLDIFQRLNIMIDVALALEYL 839
H NLV+++ C+ + +I E+M G+L + L + L + ++ A+EYL
Sbjct: 275 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 334
Query: 840 HFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEY 887
IH +A ++DF +++ + G D + I + APE
Sbjct: 335 ---EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPES 390
Query: 888 GVQGRVSTRGDVYSYGIMLMETFT 911
+ S + DV+++G++L E T
Sbjct: 391 LAYNKFSIKSDVWAFGVLLWEIAT 414
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 25/211 (11%)
Query: 722 LQATDRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQDECEVMKRIR 780
++ TD K+ L G G +G VY + + VAVK + ++ F E VMK I+
Sbjct: 10 MERTDITMKHKLGG-GQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIK 67
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLE------NRLYSGTCMLDIFQRLNIMIDVAL 834
H NLV+++ C+ + +I+E+M G+L NR +L L + ++
Sbjct: 68 HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISS 122
Query: 835 ALEYL---HFGH------STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAP 885
A+EYL +F H + + + ++DF +++ + G D + I + AP
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP 181
Query: 886 EYGVQGRVSTRGDVYSYGIMLMETFT-GKKP 915
E + S + DV+++G++L E T G P
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 25/211 (11%)
Query: 722 LQATDRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQDECEVMKRIR 780
++ TD K+ L G G +G VY + + VAVK + ++ F E VMK I+
Sbjct: 10 MERTDITMKHKLGG-GQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIK 67
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLE------NRLYSGTCMLDIFQRLNIMIDVAL 834
H NLV+++ C+ + +I+E+M G+L NR +L L + ++
Sbjct: 68 HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISS 122
Query: 835 ALEYL---HFGH------STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAP 885
A+EYL +F H + + + ++DF +++ + G D + I + AP
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP 181
Query: 886 EYGVQGRVSTRGDVYSYGIMLMETFT-GKKP 915
E + S + DV+++G++L E T G P
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 25/211 (11%)
Query: 722 LQATDRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQDECEVMKRIR 780
++ TD K+ L G G +G VY + + VAVK + ++ F E VMK I+
Sbjct: 8 MERTDITMKHKLGG-GQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIK 65
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLE------NRLYSGTCMLDIFQRLNIMIDVAL 834
H NLV+++ C+ + +I+E+M G+L NR +L L + ++
Sbjct: 66 HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISS 120
Query: 835 ALEYL---HFGH------STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAP 885
A+EYL +F H + + + ++DF +++ + G D + I + AP
Sbjct: 121 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAP 179
Query: 886 EYGVQGRVSTRGDVYSYGIMLMETFT-GKKP 915
E + S + DV+++G++L E T G P
Sbjct: 180 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 210
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 25/211 (11%)
Query: 722 LQATDRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQDECEVMKRIR 780
++ TD K+ L G G +G VY + + VAVK + ++ F E VMK I+
Sbjct: 8 MERTDITMKHKLGG-GQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIK 65
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLE------NRLYSGTCMLDIFQRLNIMIDVAL 834
H NLV+++ C+ + +I E+M G+L NR +L L + ++
Sbjct: 66 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISS 120
Query: 835 ALEYL---HFGH------STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAP 885
A+EYL +F H + + + ++DF +++ + G D + I + AP
Sbjct: 121 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTFTAHAGAKFPIKWTAP 179
Query: 886 EYGVQGRVSTRGDVYSYGIMLMETFT-GKKP 915
E + S + DV+++G++L E T G P
Sbjct: 180 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 210
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 15/206 (7%)
Query: 722 LQATDRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQDECEVMKRIR 780
++ TD K+ L G G +G VY + + VAVK + ++ F E VMK I+
Sbjct: 15 MERTDITMKHKLGG-GQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIK 72
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCM-LDIFQRLNIMIDVALALEYL 839
H NLV+++ C+ + +I E+M G+L + L ++ L + ++ A+EYL
Sbjct: 73 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 840 ---HFGH------STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQ 890
+F H + + + ++DF +++ + G D + I + APE
Sbjct: 133 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAY 191
Query: 891 GRVSTRGDVYSYGIMLMETFT-GKKP 915
+ S + DV+++G++L E T G P
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSP 217
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 15/206 (7%)
Query: 722 LQATDRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQDECEVMKRIR 780
++ TD K+ L G G +G VY + + VAVK + ++ F E VMK I+
Sbjct: 23 MERTDITMKHKLGG-GQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIK 80
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCM-LDIFQRLNIMIDVALALEYL 839
H NLV+++ C+ + +I E+M G+L + L ++ L + ++ A+EYL
Sbjct: 81 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 140
Query: 840 ---HFGH------STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQ 890
+F H + + + ++DF +++ + G D + I + APE
Sbjct: 141 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAY 199
Query: 891 GRVSTRGDVYSYGIMLMETFT-GKKP 915
+ S + DV+++G++L E T G P
Sbjct: 200 NKFSIKSDVWAFGVLLWEIATYGMSP 225
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 15/206 (7%)
Query: 722 LQATDRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQDECEVMKRIR 780
++ TD K+ L G G +G VY + + VAVK + ++ F E VMK I+
Sbjct: 15 MERTDITMKHKLGG-GQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIK 72
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCM-LDIFQRLNIMIDVALALEYL 839
H NLV+++ C+ + +I E+M G+L + L ++ L + ++ A+EYL
Sbjct: 73 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 840 ---HFGH------STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQ 890
+F H + + + ++DF +++ + G D + I + APE
Sbjct: 133 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAY 191
Query: 891 GRVSTRGDVYSYGIMLMETFT-GKKP 915
+ S + DV+++G++L E T G P
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSP 217
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 15/206 (7%)
Query: 722 LQATDRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQDECEVMKRIR 780
++ TD K+ L G G +G VY + + VAVK + ++ F E VMK I+
Sbjct: 10 MERTDITMKHKLGG-GQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIK 67
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCM-LDIFQRLNIMIDVALALEYL 839
H NLV+++ C+ + +I E+M G+L + L ++ L + ++ A+EYL
Sbjct: 68 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 127
Query: 840 ---HFGH------STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQ 890
+F H + + + ++DF +++ + G D + I + APE
Sbjct: 128 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAY 186
Query: 891 GRVSTRGDVYSYGIMLMETFT-GKKP 915
+ S + DV+++G++L E T G P
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 15/206 (7%)
Query: 722 LQATDRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQDECEVMKRIR 780
++ TD K+ L G G +G VY + + VAVK + ++ F E VMK I+
Sbjct: 14 MERTDITMKHKLGG-GQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIK 71
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCM-LDIFQRLNIMIDVALALEYL 839
H NLV+++ C+ + +I E+M G+L + L ++ L + ++ A+EYL
Sbjct: 72 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 131
Query: 840 ---HFGH------STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQ 890
+F H + + + ++DF +++ + G D + I + APE
Sbjct: 132 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAY 190
Query: 891 GRVSTRGDVYSYGIMLMETFT-GKKP 915
+ S + DV+++G++L E T G P
Sbjct: 191 NKFSIKSDVWAFGVLLWEIATYGMSP 216
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 15/206 (7%)
Query: 722 LQATDRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQDECEVMKRIR 780
++ TD K+ L G G +G VY + + VAVK + ++ F E VMK I+
Sbjct: 10 MERTDITMKHKLGG-GQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIK 67
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCM-LDIFQRLNIMIDVALALEYL 839
H NLV+++ C+ + +I E+M G+L + L ++ L + ++ A+EYL
Sbjct: 68 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 127
Query: 840 ---HFGH------STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQ 890
+F H + + + ++DF +++ + G D + I + APE
Sbjct: 128 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAY 186
Query: 891 GRVSTRGDVYSYGIMLMETFT-GKKP 915
+ S + DV+++G++L E T G P
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 15/206 (7%)
Query: 722 LQATDRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQDECEVMKRIR 780
++ TD K+ L G G +G VY + + VAVK + ++ F E VMK I+
Sbjct: 12 MERTDITMKHKLGG-GQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIK 69
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCM-LDIFQRLNIMIDVALALEYL 839
H NLV+++ C+ + +I E+M G+L + L ++ L + ++ A+EYL
Sbjct: 70 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 129
Query: 840 ---HFGH------STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQ 890
+F H + + + ++DF +++ + G D + I + APE
Sbjct: 130 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAY 188
Query: 891 GRVSTRGDVYSYGIMLMETFT-GKKP 915
+ S + DV+++G++L E T G P
Sbjct: 189 NKFSIKSDVWAFGVLLWEIATYGMSP 214
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 15/206 (7%)
Query: 722 LQATDRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQDECEVMKRIR 780
++ TD K+ L G G +G VY + + VAVK + ++ F E VMK I+
Sbjct: 12 MERTDITMKHKLGG-GQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIK 69
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCM-LDIFQRLNIMIDVALALEYL 839
H NLV+++ C+ + +I E+M G+L + L ++ L + ++ A+EYL
Sbjct: 70 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 129
Query: 840 ---HFGH------STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQ 890
+F H + + + ++DF +++ + G D + I + APE
Sbjct: 130 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAY 188
Query: 891 GRVSTRGDVYSYGIMLMETFT-GKKP 915
+ S + DV+++G++L E T G P
Sbjct: 189 NKFSIKSDVWAFGVLLWEIATYGMSP 214
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 15/206 (7%)
Query: 722 LQATDRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQDECEVMKRIR 780
++ TD K+ L G G +G VY + + VAVK + ++ F E VMK I+
Sbjct: 15 MERTDITMKHKLGG-GQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIK 72
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCM-LDIFQRLNIMIDVALALEYL 839
H NLV+++ C+ + +I E+M G+L + L ++ L + ++ A+EYL
Sbjct: 73 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 840 ---HFGH------STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQ 890
+F H + + + ++DF +++ + G D + I + APE
Sbjct: 133 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAY 191
Query: 891 GRVSTRGDVYSYGIMLMETFT-GKKP 915
+ S + DV+++G++L E T G P
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSP 217
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 53/204 (25%), Positives = 86/204 (42%), Gaps = 20/204 (9%)
Query: 728 FSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRN 783
F +LG GSF +V +AR L E A+K+ +R+ E + E +VM R+ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGH 843
VK+ +D+ + Y NG L + + R ++ ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 149
Query: 844 STPIIHY------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQG 891
IIH M I+DF AK L+ + + + + T Y++PE +
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 209
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
S D+++ G ++ + G P
Sbjct: 210 SASKSSDLWALGCIIYQLVAGLPP 233
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 18/205 (8%)
Query: 724 ATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKV-FHQRYERALKSFQ--DECEVMKRI 779
A + F LG G FG+VY+AR Q +A+KV F + E+A Q E E+ +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 780 RHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYL 839
RH N++++ + LI+EY P G++ L D + + ++A AL Y
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 126
Query: 840 HFGHSTPIIH-------YMVAHISDFSIAKF-LNGQDQLSMQTQTLATIGYMAPEYGVQG 891
HS +IH ++ + IA F + S +T T+ Y+ PE ++G
Sbjct: 127 ---HSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEM-IEG 182
Query: 892 RV-STRGDVYSYGIMLMETFTGKKP 915
R+ + D++S G++ E GK P
Sbjct: 183 RMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 18/205 (8%)
Query: 724 ATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKV-FHQRYERALKSFQ--DECEVMKRI 779
A + F LG G FG+VY+AR Q +A+KV F + E+A Q E E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 780 RHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYL 839
RH N++++ + LI+EY P G++ L D + + ++A AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 127
Query: 840 HFGHSTPIIH-------YMVAHISDFSIAKF-LNGQDQLSMQTQTLATIGYMAPEYGVQG 891
HS +IH ++ + IA F + S +T T+ Y+ PE ++G
Sbjct: 128 ---HSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEM-IEG 183
Query: 892 RV-STRGDVYSYGIMLMETFTGKKP 915
R+ + D++S G++ E GK P
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 18/205 (8%)
Query: 724 ATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKV-FHQRYERALKSFQ--DECEVMKRI 779
A + F LG G FG+VY+AR Q +A+KV F + E+A Q E E+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 780 RHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYL 839
RH N++++ + LI+EY P G++ L D + + ++A AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 129
Query: 840 HFGHSTPIIH-------YMVAHISDFSIAKF-LNGQDQLSMQTQTLATIGYMAPEYGVQG 891
HS +IH ++ + IA F + S +T T+ Y+ PE ++G
Sbjct: 130 ---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEM-IEG 185
Query: 892 RV-STRGDVYSYGIMLMETFTGKKP 915
R+ + D++S G++ E GK P
Sbjct: 186 RMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 18/205 (8%)
Query: 724 ATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKV-FHQRYERALKSFQ--DECEVMKRI 779
A + F LG G FG+VY+AR Q +A+KV F + E+A Q E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 780 RHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYL 839
RH N++++ + LI+EY P G++ L D + + ++A AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 124
Query: 840 HFGHSTPIIH-------YMVAHISDFSIAKF-LNGQDQLSMQTQTLATIGYMAPEYGVQG 891
HS +IH ++ + IA F + S +T T+ Y+ PE ++G
Sbjct: 125 ---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEM-IEG 180
Query: 892 RV-STRGDVYSYGIMLMETFTGKKP 915
R+ + D++S G++ E GK P
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 18/205 (8%)
Query: 724 ATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKV-FHQRYERALKSFQ--DECEVMKRI 779
A + F LG G FG+VY+AR Q +A+KV F + E+A Q E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 780 RHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYL 839
RH N++++ + LI+EY P G++ L D + + ++A AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 124
Query: 840 HFGHSTPIIH-------YMVAHISDFSIAKF-LNGQDQLSMQTQTLATIGYMAPEYGVQG 891
HS +IH ++ + IA F + S +T T+ Y+ PE ++G
Sbjct: 125 ---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEM-IEG 180
Query: 892 RV-STRGDVYSYGIMLMETFTGKKP 915
R+ + D++S G++ E GK P
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 18/205 (8%)
Query: 724 ATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKV-FHQRYERALKSFQ--DECEVMKRI 779
A + F LG G FG+VY+AR Q +A+KV F + E+A Q E E+ +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 780 RHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYL 839
RH N++++ + LI+EY P G++ L D + + ++A AL Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 125
Query: 840 HFGHSTPIIH-------YMVAHISDFSIAKF-LNGQDQLSMQTQTLATIGYMAPEYGVQG 891
HS +IH ++ + IA F + S +T T+ Y+ PE ++G
Sbjct: 126 ---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEM-IEG 181
Query: 892 RV-STRGDVYSYGIMLMETFTGKKP 915
R+ + D++S G++ E GK P
Sbjct: 182 RMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 53/217 (24%), Positives = 93/217 (42%), Gaps = 38/217 (17%)
Query: 734 LGIGSFGSVYVARL------QDGMEVAVKVFHQRYERALKS-FQDECEVMKRIRHRNLVK 786
LG FG VY L + VA+K + E L+ F+ E + R++H N+V
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 787 IISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQR---------------LNIMID 831
++ + D ++I Y +G L L + D+ ++++
Sbjct: 94 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 153
Query: 832 VALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLAT 879
+A +EYL H ++H +A ISD + + + D + +L
Sbjct: 154 IAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 210
Query: 880 IGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKP 915
I +MAPE + G+ S D++SYG++L E F+ G +P
Sbjct: 211 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 247
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 53/217 (24%), Positives = 93/217 (42%), Gaps = 38/217 (17%)
Query: 734 LGIGSFGSVYVARL------QDGMEVAVKVFHQRYERALKS-FQDECEVMKRIRHRNLVK 786
LG FG VY L + VA+K + E L+ F+ E + R++H N+V
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 787 IISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQR---------------LNIMID 831
++ + D ++I Y +G L L + D+ ++++
Sbjct: 77 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 136
Query: 832 VALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLAT 879
+A +EYL H ++H +A ISD + + + D + +L
Sbjct: 137 IAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 193
Query: 880 IGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKP 915
I +MAPE + G+ S D++SYG++L E F+ G +P
Sbjct: 194 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 230
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 113/262 (43%), Gaps = 52/262 (19%)
Query: 688 LKWKLIRCWKSITGSSNDGINSPQAIRRFSYHELLQATDRFSKNNL-----LGIGSFGSV 742
++WK+I +S G+S I+ Q Y+E + F +NNL LG G+FG V
Sbjct: 14 VRWKII---ESYEGNSYTFIDPTQ----LPYNEKWE----FPRNNLQFGKTLGAGAFGKV 62
Query: 743 YVARL-----QDG-MEVAVKVF----HQRYERALKSFQDECEVMKRI-RHRNLVKIISAC 791
A +D ++VAVK+ H + AL S E ++M + +H N+V ++ AC
Sbjct: 63 VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS---ELKIMSHLGQHENIVNLLGAC 119
Query: 792 SNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGH-------- 843
++ +I EY G L N L + +L+ I A + LHF
Sbjct: 120 THGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAF 179
Query: 844 --STPIIHY------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGV 889
S IH VA I DF +A+ + ++ + +MAPE
Sbjct: 180 LASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIF 239
Query: 890 QGRVSTRGDVYSYGIMLMETFT 911
+ + DV+SYGI+L E F+
Sbjct: 240 DCVYTVQSDVWSYGILLWEIFS 261
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 18/205 (8%)
Query: 724 ATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKV-FHQRYERALKSFQ--DECEVMKRI 779
A + F LG G FG+VY+AR Q +A+KV F + E+A Q E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 780 RHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYL 839
RH N++++ + LI+EY P G++ L D + + ++A AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 124
Query: 840 HFGHSTPIIH-------YMVAHISDFSIAKF-LNGQDQLSMQTQTLATIGYMAPEYGVQG 891
HS +IH ++ + IA F + S +T T+ Y+ PE ++G
Sbjct: 125 ---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGTLDYLPPEM-IEG 180
Query: 892 RV-STRGDVYSYGIMLMETFTGKKP 915
R+ + D++S G++ E GK P
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 59/205 (28%), Positives = 95/205 (46%), Gaps = 18/205 (8%)
Query: 724 ATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKV-FHQRYERALKSFQ--DECEVMKRI 779
A + F LG G FG+VY+AR Q +A+KV F + E+A Q E E+ +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 780 RHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYL 839
RH N++++ + LI+EY P G++ L D + + ++A AL Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 125
Query: 840 HFGHSTPIIH-------YMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQG 891
HS +IH ++ + IA F S + TL T+ Y+ PE ++G
Sbjct: 126 ---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEM-IEG 181
Query: 892 RV-STRGDVYSYGIMLMETFTGKKP 915
R+ + D++S G++ E GK P
Sbjct: 182 RMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 96/215 (44%), Gaps = 29/215 (13%)
Query: 723 QATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQR--YERAL-KSFQDECEVMKR 778
+ + F NLLG GSF VY A + G+EVA+K+ ++ Y+ + + Q+E ++ +
Sbjct: 8 EKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQ 67
Query: 779 IRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEY 838
++H +++++ + + ++ L++E NG + L + + + M + + Y
Sbjct: 68 LKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLY 127
Query: 839 LHFGHSTPIIHY------------MVAHISDFSIAKFLNGQDQLSMQTQTLATI----GY 882
L HS I+H M I+DF +A QL M + T+ Y
Sbjct: 128 L---HSHGILHRDLTLSNLLLTRNMNIKIADFGLAT------QLKMPHEKHYTLCGTPNY 178
Query: 883 MAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTD 917
++PE + DV+S G M G+ P D
Sbjct: 179 ISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 18/205 (8%)
Query: 724 ATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKV-FHQRYERALKSFQ--DECEVMKRI 779
A + F LG G FG+VY+AR Q +A+KV F + E+A Q E E+ +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 780 RHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYL 839
RH N++++ + LI+EY P G++ L D + + ++A AL Y
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 128
Query: 840 HFGHSTPIIH-------YMVAHISDFSIAKF-LNGQDQLSMQTQTLATIGYMAPEYGVQG 891
HS +IH ++ + IA F + S +T T+ Y+ PE ++G
Sbjct: 129 ---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM-IEG 184
Query: 892 RV-STRGDVYSYGIMLMETFTGKKP 915
R+ + D++S G++ E GK P
Sbjct: 185 RMHDEKVDLWSLGVLCYEFLVGKPP 209
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 18/205 (8%)
Query: 724 ATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKV-FHQRYERALKSFQ--DECEVMKRI 779
A + F LG G FG+VY+AR Q +A+KV F + E+A Q E E+ +
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 780 RHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYL 839
RH N++++ + LI+EY P G++ L D + + ++A AL Y
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 141
Query: 840 HFGHSTPIIH-------YMVAHISDFSIAKF-LNGQDQLSMQTQTLATIGYMAPEYGVQG 891
HS +IH ++ + IA F + S +T T+ Y+ PE ++G
Sbjct: 142 ---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM-IEG 197
Query: 892 RV-STRGDVYSYGIMLMETFTGKKP 915
R+ + D++S G++ E GK P
Sbjct: 198 RMHDEKVDLWSLGVLCYEFLVGKPP 222
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 18/205 (8%)
Query: 724 ATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKV-FHQRYERALKSFQ--DECEVMKRI 779
A + F LG G FG+VY+AR Q +A+KV F + E+A Q E E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 780 RHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYL 839
RH N++++ + LI+EY P G++ L D + + ++A AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 127
Query: 840 HFGHSTPIIH-------YMVAHISDFSIAKF-LNGQDQLSMQTQTLATIGYMAPEYGVQG 891
HS +IH ++ + IA F + S +T T+ Y+ PE ++G
Sbjct: 128 ---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM-IEG 183
Query: 892 RV-STRGDVYSYGIMLMETFTGKKP 915
R+ + D++S G++ E GK P
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 18/205 (8%)
Query: 724 ATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKV-FHQRYERALKSFQ--DECEVMKRI 779
A + F LG G FG+VY+AR Q +A+KV F + E+A Q E E+ +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 780 RHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYL 839
RH N++++ + LI+EY P G++ L D + + ++A AL Y
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 123
Query: 840 HFGHSTPIIH-------YMVAHISDFSIAKF-LNGQDQLSMQTQTLATIGYMAPEYGVQG 891
HS +IH ++ + IA F + S +T T+ Y+ PE ++G
Sbjct: 124 ---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM-IEG 179
Query: 892 RV-STRGDVYSYGIMLMETFTGKKP 915
R+ + D++S G++ E GK P
Sbjct: 180 RMHDEKVDLWSLGVLCYEFLVGKPP 204
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 18/205 (8%)
Query: 724 ATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKV-FHQRYERALKSFQ--DECEVMKRI 779
A + F LG G FG+VY+AR Q +A+KV F + E+A Q E E+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 780 RHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYL 839
RH N++++ + LI+EY P G++ L D + + ++A AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 129
Query: 840 HFGHSTPIIH-------YMVAHISDFSIAKF-LNGQDQLSMQTQTLATIGYMAPEYGVQG 891
HS +IH ++ + IA F + S +T T+ Y+ PE ++G
Sbjct: 130 ---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM-IEG 185
Query: 892 RV-STRGDVYSYGIMLMETFTGKKP 915
R+ + D++S G++ E GK P
Sbjct: 186 RMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 18/205 (8%)
Query: 724 ATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKV-FHQRYERALKSFQ--DECEVMKRI 779
A + F LG G FG+VY+AR Q +A+KV F + E+A Q E E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 780 RHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYL 839
RH N++++ + LI+EY P G++ L D + + ++A AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 127
Query: 840 HFGHSTPIIH-------YMVAHISDFSIAKF-LNGQDQLSMQTQTLATIGYMAPEYGVQG 891
HS +IH ++ + IA F + S +T T+ Y+ PE ++G
Sbjct: 128 ---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM-IEG 183
Query: 892 RV-STRGDVYSYGIMLMETFTGKKP 915
R+ + D++S G++ E GK P
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 18/205 (8%)
Query: 724 ATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKV-FHQRYERALKSFQ--DECEVMKRI 779
A + F LG G FG+VY+AR Q +A+KV F + E+A Q E E+ +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 780 RHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYL 839
RH N++++ + LI+EY P G++ L D + + ++A AL Y
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 150
Query: 840 HFGHSTPIIH-------YMVAHISDFSIAKF-LNGQDQLSMQTQTLATIGYMAPEYGVQG 891
HS +IH ++ + IA F + S +T T+ Y+ PE ++G
Sbjct: 151 ---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM-IEG 206
Query: 892 RV-STRGDVYSYGIMLMETFTGKKP 915
R+ + D++S G++ E GK P
Sbjct: 207 RMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 18/205 (8%)
Query: 724 ATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKV-FHQRYERALKSFQ--DECEVMKRI 779
A + F LG G FG+VY+AR Q +A+KV F + E+A Q E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 780 RHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYL 839
RH N++++ + LI+EY P G++ L D + + ++A AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 124
Query: 840 HFGHSTPIIH-------YMVAHISDFSIAKF-LNGQDQLSMQTQTLATIGYMAPEYGVQG 891
HS +IH ++ + IA F + S +T T+ Y+ PE ++G
Sbjct: 125 ---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM-IEG 180
Query: 892 RV-STRGDVYSYGIMLMETFTGKKP 915
R+ + D++S G++ E GK P
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 53/196 (27%), Positives = 93/196 (47%), Gaps = 20/196 (10%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
LG G G V++ +VAVK Q + +F E +MK+++H+ LV++ + +
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 794 DDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALAL-EYLHFGHSTPIIH--- 849
+ +I EYM NGSL + L + + I +N ++D+A + E + F IH
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 135
Query: 850 ---------YMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVY 900
+ I+DF +A+ + + + + I + APE G + + DV+
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFP-IKWTAPEAINYGTFTIKSDVW 194
Query: 901 SYGIMLMETFT-GKKP 915
S+GI+L E T G+ P
Sbjct: 195 SFGILLTEIVTHGRIP 210
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 59/205 (28%), Positives = 96/205 (46%), Gaps = 18/205 (8%)
Query: 724 ATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKV-FHQRYERALKSFQ--DECEVMKRI 779
A + F LG G FG+VY+AR Q +A+KV F + E+A Q E E+ +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 780 RHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYL 839
RH N++++ + LI+EY P G++ L D + + ++A AL Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 125
Query: 840 HFGHSTPIIH-------YMVAHISDFSIAKFLNGQDQLSMQTQTLA-TIGYMAPEYGVQG 891
HS +IH ++ + IA F S + TL+ T+ Y+ PE ++G
Sbjct: 126 ---HSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGTLDYLPPEM-IEG 181
Query: 892 RV-STRGDVYSYGIMLMETFTGKKP 915
R+ + D++S G++ E GK P
Sbjct: 182 RMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 92/209 (44%), Gaps = 37/209 (17%)
Query: 734 LGIGSFGSVYVARLQ------DGMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVK 786
LG G+FG VY ++ ++VAVK + Y E+ F E ++ + H+N+V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 787 IISACSNDDFKALIMEYMPNGSLENRLY---------SGTCMLDIFQRLNIMIDVALALE 837
I + +++E M G L++ L S MLD+ L++ D+A +
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 169
Query: 838 YLHFGHSTPIIHY---------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGY 882
YL H IH VA I DF +A+ + + + +
Sbjct: 170 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 226
Query: 883 MAPEYGVQGRVSTRGDVYSYGIMLMETFT 911
M PE ++G +++ D +S+G++L E F+
Sbjct: 227 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 25/211 (11%)
Query: 722 LQATDRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQDECEVMKRIR 780
++ TD K+ L G G +G VY + + VAVK + ++ F E VMK I+
Sbjct: 10 MERTDITMKHKLGG-GQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIK 67
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLE------NRLYSGTCMLDIFQRLNIMIDVAL 834
H NLV+++ C+ + +I E+M G+L NR +L L + ++
Sbjct: 68 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISS 122
Query: 835 ALEYL---HFGH------STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAP 885
A+EYL +F H + + + ++DF +++ + G D + I + AP
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP 181
Query: 886 EYGVQGRVSTRGDVYSYGIMLMETFT-GKKP 915
E + S + DV+++G++L E T G P
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 25/211 (11%)
Query: 722 LQATDRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQDECEVMKRIR 780
++ TD K+ L G G +G VY + + VAVK + ++ F E VMK I+
Sbjct: 10 MERTDITMKHKLGG-GQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIK 67
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLE------NRLYSGTCMLDIFQRLNIMIDVAL 834
H NLV+++ C+ + +I E+M G+L NR +L L + ++
Sbjct: 68 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISS 122
Query: 835 ALEYL---HFGH------STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAP 885
A+EYL +F H + + + ++DF +++ + G D + I + AP
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP 181
Query: 886 EYGVQGRVSTRGDVYSYGIMLMETFT-GKKP 915
E + S + DV+++G++L E T G P
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 25/211 (11%)
Query: 722 LQATDRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQDECEVMKRIR 780
++ TD K+ L G G +G VY + + VAVK + ++ F E VMK I+
Sbjct: 15 MERTDITMKHKLGG-GQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIK 72
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLE------NRLYSGTCMLDIFQRLNIMIDVAL 834
H NLV+++ C+ + +I E+M G+L NR +L L + ++
Sbjct: 73 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISS 127
Query: 835 ALEYL---HFGH------STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAP 885
A+EYL +F H + + + ++DF +++ + G D + I + AP
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP 186
Query: 886 EYGVQGRVSTRGDVYSYGIMLMETFT-GKKP 915
E + S + DV+++G++L E T G P
Sbjct: 187 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 217
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 60.5 bits (145), Expect = 4e-09, Method: Composition-based stats.
Identities = 63/246 (25%), Positives = 110/246 (44%), Gaps = 24/246 (9%)
Query: 721 LLQATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRYE-----RALKSFQDECE 774
+L+ T+ F K +LG G+FG+VY + +G +V + V + +A K DE
Sbjct: 12 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 70
Query: 775 VMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVAL 834
VM + + ++ +++ C + LIM+ MP G L + + + LN + +A
Sbjct: 71 VMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAK 129
Query: 835 ALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGY 882
+ YL ++H +A I+DF +AK L +++ I +
Sbjct: 130 GMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 186
Query: 883 MAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEV 941
MA E + + + DV+SYG+ + E T G KP D I E+S + LP +
Sbjct: 187 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 246
Query: 942 IDTNLL 947
ID ++
Sbjct: 247 IDVYMI 252
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 111/403 (27%), Positives = 164/403 (40%), Gaps = 114/403 (28%)
Query: 199 NNLSGAIPKEIGNLTKLKDIILNDNELRGEIPQEMGNLPYLVRLTLATNNLVGVVPFTIF 258
N L+ P + NLTKL DI++N+N++ P + NL L LTL N + + P
Sbjct: 77 NQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDPLK-- 130
Query: 259 NMSTLKKLSLLENTLWGSLPSRIDLSLPNVEFLNLGTNRFSGNIPSSITNASKLTVFQLR 318
N++ L +L L NT+ S I+ S LT Q
Sbjct: 131 NLTNLNRLELSSNTI------------------------------SDISALSGLTSLQQL 160
Query: 319 --GNSFSGFIPNTIGNLRNLEFLNIADNYLTSSTPELSFLSSLTNCQKIRVLILAGNPLD 376
GN + P + NL LE L+I+ N ++ ++S L+ LTN + LI N +
Sbjct: 161 SFGNQVTDLKP--LANLTTLERLDISSNKVS----DISVLAKLTNLES---LIATNNQIS 211
Query: 377 GILPSSI-GNLS-ISLERFQMFNCRISGKIPQVISXXXXXXXXXXXXXXXXXSIPVTFSR 434
I P I NL +SL Q+ + T +
Sbjct: 212 DITPLGILTNLDELSLNGNQLKDIG-------------------------------TLAS 240
Query: 435 LLNLQGLGLAFNKLARSIPDEICHLAKLDKLILHGNKFSGAIPSCSGNLTSLRALYLGSN 494
L NL L LA N+++ P + L KL +L L N+ S P LT+L L L N
Sbjct: 241 LTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAG--LTALTNLELNEN 296
Query: 495 RFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRNNLSGDIPITIGG 554
+ L+DI P+S NLK + L L NN+S P++
Sbjct: 297 Q-----------LEDI-----------SPIS----NLKNLTYLTLYFNNISDISPVS--S 328
Query: 555 LKNLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNKISGVIP 597
L LQ+LF ANN++ S + L+++ L N+IS + P
Sbjct: 329 LTKLQRLFFANNKVSD--VSSLANLTNINWLSAGHNQISDLTP 369
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 119/279 (42%), Gaps = 77/279 (27%)
Query: 88 LGNLSSLETLDLSHNKLSG-NIPSSIFNMHT-------------------LKLLDFRDNQ 127
L NL++LE LD+S NK+S ++ + + N+ + L L NQ
Sbjct: 172 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQ 231
Query: 128 L--FGSLSSFIFNMSSMLGIDLSINRFSGELPANICXXXXXXXXXXXGRNMFHGKIPSTL 185
L G+L+S ++++ +DL+ N+ S P L
Sbjct: 232 LKDIGTLAS----LTNLTDLDLANNQISNLAP---------------------------L 260
Query: 186 SKCKQLEGLYLRFNNLSGAIPKEIGNLTKLKDIILNDNELRGEIPQEMGNLPYLVRLTLA 245
S +L L L N +S P + LT L ++ LN+N+L P + NL L LTL
Sbjct: 261 SGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLY 316
Query: 246 TNNLVGVVPFTIFNMSTLKKLSLL--ENTLWGSLPSRIDLSLPNVEFLNLGTNRFSGNIP 303
NN+ + P +S+L KL L N + S +L+ N+ +L+ G N+ S P
Sbjct: 317 FNNISDISP-----VSSLTKLQRLFFANNKVSDVSSLANLT--NINWLSAGHNQISDLTP 369
Query: 304 SSITNASKLTVFQLRGNSFSGF---------IPNTIGNL 333
+ N +++T L +++ IPNT+ N+
Sbjct: 370 --LANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNV 406
Score = 34.7 bits (78), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 35/159 (22%)
Query: 437 NLQGLGLAFNKLARSIPDEICHLAKLDKLILHGNKFSGAIPSCSGNLTSLRALYLGSNRF 496
NL + + N+L P + +L KL ++++ N+ + P NLT+L L L +N+
Sbjct: 68 NLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPLA--NLTNLTGLTLFNNQI 123
Query: 497 TSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRNNLSGDIPITIGGLK 556
T P + NL ++ ++SSN++ DI L GL
Sbjct: 124 TDIDP--LKNLTNLNRLELSSNTIS-----DISAL---------------------SGLT 155
Query: 557 NLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNKISGV 595
+LQ+L N + + + L++LE LD+S NK+S +
Sbjct: 156 SLQQLSFGNQVTD---LKPLANLTTLERLDISSNKVSDI 191
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 60.5 bits (145), Expect = 4e-09, Method: Composition-based stats.
Identities = 63/246 (25%), Positives = 110/246 (44%), Gaps = 24/246 (9%)
Query: 721 LLQATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRYE-----RALKSFQDECE 774
+L+ T+ F K +LG G+FG+VY + +G +V + V + +A K DE
Sbjct: 13 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 775 VMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVAL 834
VM + + ++ +++ C + LIM+ MP G L + + + LN + +A
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 835 ALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGY 882
+ YL ++H +A I+DF +AK L +++ I +
Sbjct: 131 GMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 187
Query: 883 MAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEV 941
MA E + + + DV+SYG+ + E T G KP D I E+S + LP +
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 247
Query: 942 IDTNLL 947
ID ++
Sbjct: 248 IDVYMI 253
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 60.5 bits (145), Expect = 4e-09, Method: Composition-based stats.
Identities = 63/246 (25%), Positives = 110/246 (44%), Gaps = 24/246 (9%)
Query: 721 LLQATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRYE-----RALKSFQDECE 774
+L+ T+ F K +LG G+FG+VY + +G +V + V + +A K DE
Sbjct: 14 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 775 VMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVAL 834
VM + + ++ +++ C + LIM+ MP G L + + + LN + +A
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 131
Query: 835 ALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGY 882
+ YL ++H +A I+DF +AK L +++ I +
Sbjct: 132 GMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 883 MAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEV 941
MA E + + + DV+SYG+ + E T G KP D I E+S + LP +
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 248
Query: 942 IDTNLL 947
ID ++
Sbjct: 249 IDVYMI 254
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 60.5 bits (145), Expect = 4e-09, Method: Composition-based stats.
Identities = 63/246 (25%), Positives = 110/246 (44%), Gaps = 24/246 (9%)
Query: 721 LLQATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRYE-----RALKSFQDECE 774
+L+ T+ F K +LG G+FG+VY + +G +V + V + +A K DE
Sbjct: 15 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 73
Query: 775 VMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVAL 834
VM + + ++ +++ C + LIM+ MP G L + + + LN + +A
Sbjct: 74 VMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 132
Query: 835 ALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGY 882
+ YL ++H +A I+DF +AK L +++ I +
Sbjct: 133 GMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 189
Query: 883 MAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEV 941
MA E + + + DV+SYG+ + E T G KP D I E+S + LP +
Sbjct: 190 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 249
Query: 942 IDTNLL 947
ID ++
Sbjct: 250 IDVYMI 255
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 60.5 bits (145), Expect = 4e-09, Method: Composition-based stats.
Identities = 63/246 (25%), Positives = 110/246 (44%), Gaps = 24/246 (9%)
Query: 721 LLQATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRYE-----RALKSFQDECE 774
+L+ T+ F K +LG G+FG+VY + +G +V + V + +A K DE
Sbjct: 12 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 70
Query: 775 VMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVAL 834
VM + + ++ +++ C + LIM+ MP G L + + + LN + +A
Sbjct: 71 VMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 129
Query: 835 ALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGY 882
+ YL ++H +A I+DF +AK L +++ I +
Sbjct: 130 GMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 186
Query: 883 MAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEV 941
MA E + + + DV+SYG+ + E T G KP D I E+S + LP +
Sbjct: 187 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 246
Query: 942 IDTNLL 947
ID ++
Sbjct: 247 IDVYMI 252
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 60.5 bits (145), Expect = 4e-09, Method: Composition-based stats.
Identities = 63/246 (25%), Positives = 110/246 (44%), Gaps = 24/246 (9%)
Query: 721 LLQATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRYE-----RALKSFQDECE 774
+L+ T+ F K +LG G+FG+VY + +G +V + V + +A K DE
Sbjct: 11 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 775 VMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVAL 834
VM + + ++ +++ C + LIM+ MP G L + + + LN + +A
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 835 ALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGY 882
+ YL ++H +A I+DF +AK L +++ I +
Sbjct: 129 GMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 883 MAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEV 941
MA E + + + DV+SYG+ + E T G KP D I E+S + LP +
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 245
Query: 942 IDTNLL 947
ID ++
Sbjct: 246 IDVYMI 251
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 95/203 (46%), Gaps = 23/203 (11%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFH--QRYERALKSFQDECEVMKRIRHRNLVKIISAC 791
+G GSFG+VY + +VAVK+ + + L++F++E V+++ RH N++ +
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 792 SNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYM 851
+ A++ ++ SL + L++ ++ + ++I A ++YL H+ IIH
Sbjct: 90 TAPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYL---HAKSIIHRD 145
Query: 852 V------------AHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPE---YGVQGRVSTR 896
+ I DF +A + Q +I +MAPE S +
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205
Query: 897 GDVYSYGIMLMETFTGKKPTDEI 919
DVY++GI+L E TG+ P I
Sbjct: 206 SDVYAFGIVLYELMTGQLPYSNI 228
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 60.5 bits (145), Expect = 4e-09, Method: Composition-based stats.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 15/206 (7%)
Query: 722 LQATDRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQDECEVMKRIR 780
++ TD K+ L G G +G VY + + VAVK + ++ F E VMK I+
Sbjct: 11 MERTDITMKHKLGG-GQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIK 68
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCM-LDIFQRLNIMIDVALALEYL 839
H NLV+++ C+ + +I E+M G+L + L ++ L + ++ A+EYL
Sbjct: 69 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 128
Query: 840 ---HFGH------STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQ 890
+F H + + + ++DF +++ + G D + I + APE
Sbjct: 129 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAPAGAKFPIKWTAPESLAY 187
Query: 891 GRVSTRGDVYSYGIMLMETFT-GKKP 915
+ S + DV+++G++L E T G P
Sbjct: 188 NKFSIKSDVWAFGVLLWEIATYGMSP 213
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 60.5 bits (145), Expect = 4e-09, Method: Composition-based stats.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 15/206 (7%)
Query: 722 LQATDRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQDECEVMKRIR 780
++ TD K+ L G G +G VY + + VAVK + ++ F E VMK I+
Sbjct: 12 MERTDITMKHKLGG-GQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIK 69
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCM-LDIFQRLNIMIDVALALEYL 839
H NLV+++ C+ + +I E+M G+L + L ++ L + ++ A+EYL
Sbjct: 70 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 129
Query: 840 ---HFGH------STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQ 890
+F H + + + ++DF +++ + G D + I + APE
Sbjct: 130 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAPAGAKFPIKWTAPESLAY 188
Query: 891 GRVSTRGDVYSYGIMLMETFT-GKKP 915
+ S + DV+++G++L E T G P
Sbjct: 189 NKFSIKSDVWAFGVLLWEIATYGMSP 214
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 57/198 (28%), Positives = 87/198 (43%), Gaps = 23/198 (11%)
Query: 734 LGIGSFGSVYVARL-----QDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKI- 787
LG G+FGSV + R G VAVK + FQ E +++K + +VK
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 788 -ISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTP 846
+S L+MEY+P+G L + L LD + L + +EYL S
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL---GSRR 134
Query: 847 IIHYMVA------------HISDFSIAKFLN-GQDQLSMQTQTLATIGYMAPEYGVQGRV 893
+H +A I+DF +AK L +D ++ + I + APE
Sbjct: 135 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF 194
Query: 894 STRGDVYSYGIMLMETFT 911
S + DV+S+G++L E FT
Sbjct: 195 SRQSDVWSFGVVLYELFT 212
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 57/198 (28%), Positives = 87/198 (43%), Gaps = 23/198 (11%)
Query: 734 LGIGSFGSVYVARL-----QDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKI- 787
LG G+FGSV + R G VAVK + FQ E +++K + +VK
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 788 -ISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTP 846
+S L+MEY+P+G L + L LD + L + +EYL S
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL---GSRR 135
Query: 847 IIHYMVA------------HISDFSIAKFLN-GQDQLSMQTQTLATIGYMAPEYGVQGRV 893
+H +A I+DF +AK L +D ++ + I + APE
Sbjct: 136 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF 195
Query: 894 STRGDVYSYGIMLMETFT 911
S + DV+S+G++L E FT
Sbjct: 196 SRQSDVWSFGVVLYELFT 213
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 57/198 (28%), Positives = 87/198 (43%), Gaps = 23/198 (11%)
Query: 734 LGIGSFGSVYVARL-----QDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKI- 787
LG G+FGSV + R G VAVK + FQ E +++K + +VK
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 788 -ISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTP 846
+S L+MEY+P+G L + L LD + L + +EYL S
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL---GSRR 147
Query: 847 IIHYMVA------------HISDFSIAKFLN-GQDQLSMQTQTLATIGYMAPEYGVQGRV 893
+H +A I+DF +AK L +D ++ + I + APE
Sbjct: 148 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF 207
Query: 894 STRGDVYSYGIMLMETFT 911
S + DV+S+G++L E FT
Sbjct: 208 SRQSDVWSFGVVLYELFT 225
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 18/205 (8%)
Query: 724 ATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKV-FHQRYERALKSFQ--DECEVMKRI 779
A + F LG G FG+VY+AR Q +A+KV F + E+A Q E E+ +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 780 RHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYL 839
RH N++++ + LI+EY P G++ L D + + ++A AL Y
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 121
Query: 840 HFGHSTPIIH-------YMVAHISDFSIAKF-LNGQDQLSMQTQTLATIGYMAPEYGVQG 891
HS +IH ++ + IA F + S +T T+ Y+ PE ++G
Sbjct: 122 ---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM-IEG 177
Query: 892 RV-STRGDVYSYGIMLMETFTGKKP 915
R+ + D++S G++ E GK P
Sbjct: 178 RMHDEKVDLWSLGVLCYEFLVGKPP 202
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 111/256 (43%), Gaps = 45/256 (17%)
Query: 698 SITGSSNDGINSPQAIRRFSYH---ELLQATDRFSKNNLLGIGSFGSVY------VARLQ 748
+TGSS++ R + Y E + F K +LG G+FG V +++
Sbjct: 17 QVTGSSDNEYFYVD-FREYEYDLKWEFPRENLEFGK--VLGSGAFGKVMNATAYGISKTG 73
Query: 749 DGMEVAVKVFHQRYERALK-SFQDECEVMKRI-RHRNLVKIISACSNDDFKALIMEYMPN 806
++VAVK+ ++ + + + + E ++M ++ H N+V ++ AC+ LI EY
Sbjct: 74 VSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCY 133
Query: 807 GSLENRL-------------YSGTCMLDIFQRLNIM---------IDVALALEYLHF--- 841
G L N L Y L+ + LN++ VA +E+L F
Sbjct: 134 GDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSC 193
Query: 842 ------GHSTPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVST 895
+ + H V I DF +A+ + ++ + +MAPE +G +
Sbjct: 194 VHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTI 253
Query: 896 RGDVYSYGIMLMETFT 911
+ DV+SYGI+L E F+
Sbjct: 254 KSDVWSYGILLWEIFS 269
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 60.1 bits (144), Expect = 6e-09, Method: Composition-based stats.
Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 724 ATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKV-FHQRYERALKSFQ--DECEVMKRI 779
A + F LG G FG+VY+AR Q +A+KV F + E+A Q E E+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 780 RHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYL 839
RH N++++ + LI+EY P G++ L D + + ++A AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 129
Query: 840 HFGHSTPIIH-------YMVAHISDFSIAKF-LNGQDQLSMQTQTLATIGYMAPEYGVQG 891
HS +IH ++ + IA F + S +T T+ Y+ PE ++G
Sbjct: 130 ---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEX-IEG 185
Query: 892 RV-STRGDVYSYGIMLMETFTGKKP 915
R + D++S G++ E GK P
Sbjct: 186 RXHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 60.1 bits (144), Expect = 6e-09, Method: Composition-based stats.
Identities = 57/198 (28%), Positives = 87/198 (43%), Gaps = 23/198 (11%)
Query: 734 LGIGSFGSVYVARL-----QDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKI- 787
LG G+FGSV + R G VAVK + FQ E +++K + +VK
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 788 -ISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTP 846
+S L+MEY+P+G L + L LD + L + +EYL S
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL---GSRR 131
Query: 847 IIHYMVA------------HISDFSIAKFLN-GQDQLSMQTQTLATIGYMAPEYGVQGRV 893
+H +A I+DF +AK L +D ++ + I + APE
Sbjct: 132 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIF 191
Query: 894 STRGDVYSYGIMLMETFT 911
S + DV+S+G++L E FT
Sbjct: 192 SRQSDVWSFGVVLYELFT 209
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 59.7 bits (143), Expect = 9e-09, Method: Composition-based stats.
Identities = 57/205 (27%), Positives = 93/205 (45%), Gaps = 18/205 (8%)
Query: 724 ATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKV-FHQRYERALKSFQ--DECEVMKRI 779
A + F LG G FG+VY+AR Q +A+KV F + E+A Q E E+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 780 RHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYL 839
RH N++++ + LI+EY P G + L D + + ++A AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL-QKLSKFDEQRTATYITELANALSYC 129
Query: 840 HFGHSTPIIH-------YMVAHISDFSIAKF-LNGQDQLSMQTQTLATIGYMAPEYGVQG 891
HS +IH ++ + IA F + S + T+ Y+ PE ++G
Sbjct: 130 ---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGTLDYLPPEM-IEG 185
Query: 892 RV-STRGDVYSYGIMLMETFTGKKP 915
R+ + D++S G++ E GK P
Sbjct: 186 RMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 59.3 bits (142), Expect = 9e-09, Method: Composition-based stats.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 20/204 (9%)
Query: 728 FSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRN 783
F +LG GSF +V +AR L E A+K+ +R+ E + E +VM R+ H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGH 843
VK+ +D+ + Y NG L + + R ++ ALEYLH
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 146
Query: 844 STPIIHY------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQG 891
IIH M I+DF AK L+ + + + + T Y++PE +
Sbjct: 147 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 206
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
D+++ G ++ + G P
Sbjct: 207 SACKSSDLWALGCIIYQLVAGLPP 230
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 59.3 bits (142), Expect = 9e-09, Method: Composition-based stats.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 20/204 (9%)
Query: 728 FSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRN 783
F +LG GSF +V +AR L E A+K+ +R+ E + E +VM R+ H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGH 843
VK+ +D+ + Y NG L + + R ++ ALEYLH
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 150
Query: 844 STPIIHY------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQG 891
IIH M I+DF AK L+ + + + + T Y++PE +
Sbjct: 151 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 210
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
D+++ G ++ + G P
Sbjct: 211 SACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 59.3 bits (142), Expect = 9e-09, Method: Composition-based stats.
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 18/205 (8%)
Query: 724 ATDRFSKNNLLGIGSFGSVYVARLQDGMEV-AVKV-FHQRYERALKSFQ--DECEVMKRI 779
A + F LG G FG+VY+AR ++ + A+KV F + E+A Q E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 780 RHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYL 839
RH N++++ + LI+EY P G++ L D + + ++A AL Y
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 124
Query: 840 HFGHSTPIIH-------YMVAHISDFSIAKF-LNGQDQLSMQTQTLATIGYMAPEYGVQG 891
HS +IH ++ + IA F + S + T+ Y+ PE ++G
Sbjct: 125 ---HSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEM-IEG 180
Query: 892 RV-STRGDVYSYGIMLMETFTGKKP 915
R+ + D++S G++ E GK P
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 20/204 (9%)
Query: 728 FSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRN 783
F +LG GSF +V +AR L E A+K+ +R+ E + E +VM R+ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGH 843
VK+ +D+ + Y NG L + + R ++ ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 149
Query: 844 STPIIHY------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQG 891
IIH M I+DF AK L+ + + + + T Y++PE +
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
D+++ G ++ + G P
Sbjct: 210 SAXKSSDLWALGCIIYQLVAGLPP 233
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 108/246 (43%), Gaps = 24/246 (9%)
Query: 721 LLQATDRFSKNNLLGIGSFGSVYVA-RLQDGMEVAVKVFHQRYERAL-----KSFQDECE 774
+L+ T+ F K +LG G+FG+VY + +G +V + V + A K DE
Sbjct: 36 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 94
Query: 775 VMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVAL 834
VM + + ++ +++ C + LI + MP G L + + + LN + +A
Sbjct: 95 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 153
Query: 835 ALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGY 882
+ YL ++H +A I+DF +AK L +++ I +
Sbjct: 154 GMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 210
Query: 883 MAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEV 941
MA E + + + DV+SYG+ + E T G KP D I E+S + LP +
Sbjct: 211 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 270
Query: 942 IDTNLL 947
ID ++
Sbjct: 271 IDVYMI 276
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 110/403 (27%), Positives = 164/403 (40%), Gaps = 114/403 (28%)
Query: 199 NNLSGAIPKEIGNLTKLKDIILNDNELRGEIPQEMGNLPYLVRLTLATNNLVGVVPFTIF 258
N L+ P + NLTKL DI++N+N++ P + NL L LTL N + + P
Sbjct: 73 NQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDPLK-- 126
Query: 259 NMSTLKKLSLLENTLWGSLPSRIDLSLPNVEFLNLGTNRFSGNIPSSITNASKLTVFQLR 318
N++ L +L L NT+ S I+ S LT Q
Sbjct: 127 NLTNLNRLELSSNTI------------------------------SDISALSGLTSLQQL 156
Query: 319 --GNSFSGFIPNTIGNLRNLEFLNIADNYLTSSTPELSFLSSLTNCQKIRVLILAGNPLD 376
GN + P + NL LE L+I+ N ++ ++S L+ LTN + LI N +
Sbjct: 157 NFGNQVTDLKP--LANLTTLERLDISSNKVS----DISVLAKLTNLES---LIATNNQIS 207
Query: 377 GILPSSI-GNLS-ISLERFQMFNCRISGKIPQVISXXXXXXXXXXXXXXXXXSIPVTFSR 434
I P I NL +SL Q+ + T +
Sbjct: 208 DITPLGILTNLDELSLNGNQLKDIG-------------------------------TLAS 236
Query: 435 LLNLQGLGLAFNKLARSIPDEICHLAKLDKLILHGNKFSGAIPSCSGNLTSLRALYLGSN 494
L NL L LA N+++ P + L KL +L L N+ S P LT+L L L N
Sbjct: 237 LTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAG--LTALTNLELNEN 292
Query: 495 RFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRNNLSGDIPITIGG 554
+ L+DI P+S NLK + L L NN+S P++
Sbjct: 293 Q-----------LEDI-----------SPIS----NLKNLTYLTLYFNNISDISPVS--S 324
Query: 555 LKNLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNKISGVIP 597
L LQ+LF +NN++ S + L+++ L N+IS + P
Sbjct: 325 LTKLQRLFFSNNKVSD--VSSLANLTNINWLSAGHNQISDLTP 365
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 119/279 (42%), Gaps = 77/279 (27%)
Query: 88 LGNLSSLETLDLSHNKLSG-NIPSSIFNMHT-------------------LKLLDFRDNQ 127
L NL++LE LD+S NK+S ++ + + N+ + L L NQ
Sbjct: 168 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQ 227
Query: 128 L--FGSLSSFIFNMSSMLGIDLSINRFSGELPANICXXXXXXXXXXXGRNMFHGKIPSTL 185
L G+L+S ++++ +DL+ N+ S P L
Sbjct: 228 LKDIGTLAS----LTNLTDLDLANNQISNLAP---------------------------L 256
Query: 186 SKCKQLEGLYLRFNNLSGAIPKEIGNLTKLKDIILNDNELRGEIPQEMGNLPYLVRLTLA 245
S +L L L N +S P + LT L ++ LN+N+L P + NL L LTL
Sbjct: 257 SGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLY 312
Query: 246 TNNLVGVVPFTIFNMSTLKKLSLL--ENTLWGSLPSRIDLSLPNVEFLNLGTNRFSGNIP 303
NN+ + P +S+L KL L N + S +L+ N+ +L+ G N+ S P
Sbjct: 313 FNNISDISP-----VSSLTKLQRLFFSNNKVSDVSSLANLT--NINWLSAGHNQISDLTP 365
Query: 304 SSITNASKLTVFQLRGNSFSGF---------IPNTIGNL 333
+ N +++T L +++ IPNT+ N+
Sbjct: 366 --LANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNV 402
Score = 34.7 bits (78), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 35/159 (22%)
Query: 437 NLQGLGLAFNKLARSIPDEICHLAKLDKLILHGNKFSGAIPSCSGNLTSLRALYLGSNRF 496
NL + + N+L P + +L KL ++++ N+ + P NLT+L L L +N+
Sbjct: 64 NLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPLA--NLTNLTGLTLFNNQI 119
Query: 497 TSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRNNLSGDIPITIGGLK 556
T P + NL ++ ++SSN++ DI L GL
Sbjct: 120 TDIDP--LKNLTNLNRLELSSNTIS-----DISAL---------------------SGLT 151
Query: 557 NLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNKISGV 595
+LQ+L N + + + L++LE LD+S NK+S +
Sbjct: 152 SLQQLNFGNQVTD---LKPLANLTTLERLDISSNKVSDI 187
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 20/204 (9%)
Query: 728 FSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRN 783
F +LG GSF +V +AR L E A+K+ +R+ E + E +VM R+ H
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 70
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGH 843
VK+ +D+ + Y NG L + + R ++ ALEYLH
Sbjct: 71 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 126
Query: 844 STPIIHY------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQG 891
IIH M I+DF AK L+ + + + + T Y++PE +
Sbjct: 127 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 186
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
D+++ G ++ + G P
Sbjct: 187 SACKSSDLWALGCIIYQLVAGLPP 210
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 20/204 (9%)
Query: 728 FSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRN 783
F +LG GSF +V +AR L E A+K+ +R+ E + E +VM R+ H
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 71
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGH 843
VK+ +D+ + Y NG L + + R ++ ALEYLH
Sbjct: 72 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 127
Query: 844 STPIIHY------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQG 891
IIH M I+DF AK L+ + + + + T Y++PE +
Sbjct: 128 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 187
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
D+++ G ++ + G P
Sbjct: 188 SACKSSDLWALGCIIYQLVAGLPP 211
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 20/204 (9%)
Query: 728 FSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRN 783
F +LG GSF +V +AR L E A+K+ +R+ E + E +VM R+ H
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 69
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGH 843
VK+ +D+ + Y NG L + + R ++ ALEYLH
Sbjct: 70 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 125
Query: 844 STPIIHY------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQG 891
IIH M I+DF AK L+ + + + + T Y++PE +
Sbjct: 126 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 185
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
D+++ G ++ + G P
Sbjct: 186 SACKSSDLWALGCIIYQLVAGLPP 209
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 59/223 (26%), Positives = 107/223 (47%), Gaps = 34/223 (15%)
Query: 721 LLQATDRFSKNNLLGIGSFGSVYVA-RLQDG----MEVAVKVFHQRY-ERALKSFQDECE 774
+L+ T+ + +LG G+FG+VY + +G + VA+K+ ++ +A F DE
Sbjct: 34 ILKETE-LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEAL 92
Query: 775 VMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSL-----ENRLYSGTCMLDIFQRLNIM 829
+M + H +LV+++ C + + L+ + MP+G L E++ G+ +L LN
Sbjct: 93 IMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLL-----LNWC 146
Query: 830 IDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTL 877
+ +A + YL ++H +A I+DF +A+ L G ++
Sbjct: 147 VQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGK 203
Query: 878 ATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEI 919
I +MA E + + + DV+SYG+ + E T G KP D I
Sbjct: 204 MPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGI 246
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 59/223 (26%), Positives = 107/223 (47%), Gaps = 34/223 (15%)
Query: 721 LLQATDRFSKNNLLGIGSFGSVYVA-RLQDG----MEVAVKVFHQRY-ERALKSFQDECE 774
+L+ T+ + +LG G+FG+VY + +G + VA+K+ ++ +A F DE
Sbjct: 11 ILKETE-LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEAL 69
Query: 775 VMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSL-----ENRLYSGTCMLDIFQRLNIM 829
+M + H +LV+++ C + + L+ + MP+G L E++ G+ +L LN
Sbjct: 70 IMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLL-----LNWC 123
Query: 830 IDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTL 877
+ +A + YL ++H +A I+DF +A+ L G ++
Sbjct: 124 VQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGK 180
Query: 878 ATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEI 919
I +MA E + + + DV+SYG+ + E T G KP D I
Sbjct: 181 MPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGI 223
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 20/204 (9%)
Query: 728 FSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRN 783
F +LG GSF +V +AR L E A+K+ +R+ E + E +VM R+ H
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 68
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGH 843
VK+ +D+ + Y NG L + + R ++ ALEYLH
Sbjct: 69 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 124
Query: 844 STPIIHY------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQG 891
IIH M I+DF AK L+ + + + + T Y++PE +
Sbjct: 125 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 184
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
D+++ G ++ + G P
Sbjct: 185 SACKSSDLWALGCIIYQLVAGLPP 208
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 20/204 (9%)
Query: 728 FSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRN 783
F +LG GSF +V +AR L E A+K+ +R+ E + E +VM R+ H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGH 843
VK+ +D+ + Y NG L + + R ++ ALEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 147
Query: 844 STPIIHY------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQG 891
IIH M I+DF AK L+ + + + + T Y++PE +
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
D+++ G ++ + G P
Sbjct: 208 SACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 20/204 (9%)
Query: 728 FSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRN 783
F +LG GSF +V +AR L E A+K+ +R+ E + E +VM R+ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGH 843
VK+ +D+ + Y NG L + + R ++ ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 149
Query: 844 STPIIHY------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQG 891
IIH M I+DF AK L+ + + + + T Y++PE +
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
D+++ G ++ + G P
Sbjct: 210 SACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 20/204 (9%)
Query: 728 FSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRN 783
F +LG GSF +V +AR L E A+K+ +R+ E + E +VM R+ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGH 843
VK+ +D+ + Y NG L + + R ++ ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 149
Query: 844 STPIIHY------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQG 891
IIH M I+DF AK L+ + + + + T Y++PE +
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
D+++ G ++ + G P
Sbjct: 210 SACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 20/204 (9%)
Query: 728 FSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRN 783
F +LG GSF +V +AR L E A+K+ +R+ E + E +VM R+ H
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 75
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGH 843
VK+ +D+ + Y NG L + + R ++ ALEYLH
Sbjct: 76 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 131
Query: 844 STPIIHY------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQG 891
IIH M I+DF AK L+ + + + + T Y++PE +
Sbjct: 132 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 191
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
D+++ G ++ + G P
Sbjct: 192 SACKSSDLWALGCIIYQLVAGLPP 215
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 20/204 (9%)
Query: 728 FSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRN 783
F +LG GSF +V +AR L E A+K+ +R+ E + E +VM R+ H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGH 843
VK+ +D+ + Y NG L + + R ++ ALEYLH
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 146
Query: 844 STPIIHY------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQG 891
IIH M I+DF AK L+ + + + + T Y++PE +
Sbjct: 147 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 206
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
D+++ G ++ + G P
Sbjct: 207 SACKSSDLWALGCIIYQLVAGLPP 230
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 20/204 (9%)
Query: 728 FSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRN 783
F +LG GSF +V +AR L E A+K+ +R+ E + E +VM R+ H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGH 843
VK+ +D+ + Y NG L + + R ++ ALEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 147
Query: 844 STPIIHY------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQG 891
IIH M I+DF AK L+ + + + + T Y++PE +
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
D+++ G ++ + G P
Sbjct: 208 SACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 20/204 (9%)
Query: 728 FSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRN 783
F +LG GSF +V +AR L E A+K+ +R+ E + E +VM R+ H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGH 843
VK+ +D+ + Y NG L + + R ++ ALEYLH
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 150
Query: 844 STPIIHY------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQG 891
IIH M I+DF AK L+ + + + + T Y++PE +
Sbjct: 151 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 210
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
D+++ G ++ + G P
Sbjct: 211 SACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 20/204 (9%)
Query: 728 FSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRN 783
F +LG GSF +V +AR L E A+K+ +R+ E + E +VM R+ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGH 843
VK+ +D+ + Y NG L + + R ++ ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 149
Query: 844 STPIIHY------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQG 891
IIH M I+DF AK L+ + + + + T Y++PE +
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
D+++ G ++ + G P
Sbjct: 210 SACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 20/204 (9%)
Query: 728 FSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRN 783
F +LG GSF +V +AR L E A+K+ +R+ E + E +VM R+ H
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 96
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGH 843
VK+ +D+ + Y NG L + + R ++ ALEYLH
Sbjct: 97 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 152
Query: 844 STPIIHY------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQG 891
IIH M I+DF AK L+ + + + + T Y++PE +
Sbjct: 153 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 212
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
D+++ G ++ + G P
Sbjct: 213 SACKSSDLWALGCIIYQLVAGLPP 236
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 20/204 (9%)
Query: 728 FSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRN 783
F +LG GSF +V +AR L E A+K+ +R+ E + E +VM R+ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGH 843
VK+ +D+ + Y NG L + + R ++ ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 149
Query: 844 STPIIHY------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQG 891
IIH M I+DF AK L+ + + + + T Y++PE +
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
D+++ G ++ + G P
Sbjct: 210 SACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 20/204 (9%)
Query: 728 FSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRN 783
F +LG GSF +V +AR L E A+K+ +R+ E + E +VM R+ H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGH 843
VK+ +D+ + Y NG L + + R ++ ALEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 147
Query: 844 STPIIHY------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQG 891
IIH M I+DF AK L+ + + + + T Y++PE +
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEK 207
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
D+++ G ++ + G P
Sbjct: 208 SACKSSDLWALGCIIYQLVAGLPP 231
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 108/246 (43%), Gaps = 24/246 (9%)
Query: 721 LLQATDRFSKNNLLGIGSFGSVYVA-RLQDGMEVAVKVFHQRYERAL-----KSFQDECE 774
+L+ T+ F K +LG G+FG+VY + +G +V + V + A K DE
Sbjct: 21 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 79
Query: 775 VMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVAL 834
VM + + ++ +++ C + LI + MP G L + + + LN + +A
Sbjct: 80 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 138
Query: 835 ALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGY 882
+ YL ++H +A I+DF +AK L +++ I +
Sbjct: 139 GMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 195
Query: 883 MAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEV 941
MA E + + + DV+SYG+ + E T G KP D I E+S + LP +
Sbjct: 196 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 255
Query: 942 IDTNLL 947
ID ++
Sbjct: 256 IDVYMI 261
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 20/204 (9%)
Query: 728 FSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRN 783
F +LG GSF +V +AR L E A+K+ +R+ E + E +VM R+ H
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 98
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGH 843
VK+ +D+ + Y NG L + + R ++ ALEYLH
Sbjct: 99 FVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 154
Query: 844 STPIIHY------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQG 891
IIH M I+DF AK L+ + + + + T Y++PE +
Sbjct: 155 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 214
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
D+++ G ++ + G P
Sbjct: 215 SACKSSDLWALGCIIYQLVAGLPP 238
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 37/209 (17%)
Query: 734 LGIGSFGSVYVARLQ------DGMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVK 786
LG G+FG VY ++ ++VAVK + E+ F E ++ + H+N+V+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 787 IISACSNDDFKALIMEYMPNGSLENRLY---------SGTCMLDIFQRLNIMIDVALALE 837
I + ++ME M G L++ L S MLD+ L++ D+A +
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 154
Query: 838 YLHFGHSTPIIHY---------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGY 882
YL H IH VA I DF +A+ + + + +
Sbjct: 155 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 211
Query: 883 MAPEYGVQGRVSTRGDVYSYGIMLMETFT 911
M PE ++G +++ D +S+G++L E F+
Sbjct: 212 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 724 ATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKV-FHQRYERALKSFQ--DECEVMKRI 779
A + F LG G FG+VY+AR Q +A+KV F + E+A Q E E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 780 RHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYL 839
RH N++++ + LI+EY P G++ L D + + ++A AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 127
Query: 840 HFGHSTPIIH-------YMVAHISDFSIAKF-LNGQDQLSMQTQTLATIGYMAPEYGVQG 891
HS +IH ++ + IA F + S + T+ Y+ PE ++G
Sbjct: 128 ---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEM-IEG 183
Query: 892 RV-STRGDVYSYGIMLMETFTGKKP 915
R+ + D++S G++ E GK P
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 724 ATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKV-FHQRYERALKSFQ--DECEVMKRI 779
A + F LG G FG+VY+AR Q +A+KV F + E+A Q E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 780 RHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYL 839
RH N++++ + LI+EY P G++ L D + + ++A AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 124
Query: 840 HFGHSTPIIH-------YMVAHISDFSIAKF-LNGQDQLSMQTQTLATIGYMAPEYGVQG 891
HS +IH ++ + IA F + S + T+ Y+ PE ++G
Sbjct: 125 ---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEM-IEG 180
Query: 892 RV-STRGDVYSYGIMLMETFTGKKP 915
R+ + D++S G++ E GK P
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 724 ATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKV-FHQRYERALKSFQ--DECEVMKRI 779
A + F LG G FG+VY+AR Q +A+KV F + E+A Q E E+ +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 780 RHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYL 839
RH N++++ + LI+EY P G++ L D + + ++A AL Y
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 126
Query: 840 HFGHSTPIIH-------YMVAHISDFSIAKF-LNGQDQLSMQTQTLATIGYMAPEYGVQG 891
HS +IH ++ + IA F + S + T+ Y+ PE ++G
Sbjct: 127 ---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEM-IEG 182
Query: 892 RV-STRGDVYSYGIMLMETFTGKKP 915
R+ + D++S G++ E GK P
Sbjct: 183 RMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 58.9 bits (141), Expect = 2e-08, Method: Composition-based stats.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 724 ATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKV-FHQRYERALKSFQ--DECEVMKRI 779
A + F LG G FG+VY+AR Q +A+KV F + E+A Q E E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 780 RHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYL 839
RH N++++ + LI+EY P G++ L D + + ++A AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 127
Query: 840 HFGHSTPIIH-------YMVAHISDFSIAKF-LNGQDQLSMQTQTLATIGYMAPEYGVQG 891
HS +IH ++ + IA F + S + T+ Y+ PE ++G
Sbjct: 128 ---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEM-IEG 183
Query: 892 RV-STRGDVYSYGIMLMETFTGKKP 915
R+ + D++S G++ E GK P
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 58.9 bits (141), Expect = 2e-08, Method: Composition-based stats.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 724 ATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKV-FHQRYERALKSFQ--DECEVMKRI 779
A + F LG G FG+VY+AR Q +A+KV F + E+A Q E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 780 RHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYL 839
RH N++++ + LI+EY P G++ L D + + ++A AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 124
Query: 840 HFGHSTPIIH-------YMVAHISDFSIAKF-LNGQDQLSMQTQTLATIGYMAPEYGVQG 891
HS +IH ++ + IA F + S + T+ Y+ PE ++G
Sbjct: 125 ---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEM-IEG 180
Query: 892 RV-STRGDVYSYGIMLMETFTGKKP 915
R+ + D++S G++ E GK P
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 37/209 (17%)
Query: 734 LGIGSFGSVYVARLQ------DGMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVK 786
LG G+FG VY ++ ++VAVK + E+ F E ++ + H+N+V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 787 IISACSNDDFKALIMEYMPNGSLENRLY---------SGTCMLDIFQRLNIMIDVALALE 837
I + ++ME M G L++ L S MLD+ L++ D+A +
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 169
Query: 838 YLHFGHSTPIIHY---------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGY 882
YL H IH VA I DF +A+ + + + +
Sbjct: 170 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 226
Query: 883 MAPEYGVQGRVSTRGDVYSYGIMLMETFT 911
M PE ++G +++ D +S+G++L E F+
Sbjct: 227 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 31/216 (14%)
Query: 719 HELLQATDRFSKNNLLGIGSFG-SVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMK 777
H + + +D +LG G FG ++ V + G + +K + E ++F E +VM+
Sbjct: 4 HRIFRPSD-LIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMR 62
Query: 778 RIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALE 837
+ H N++K I D I EY+ G+L + S QR++ D+A +
Sbjct: 63 CLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMA 122
Query: 838 YLHFGHSTPIIHY-MVAH-----------ISDFSIAKFLNGQDQLSMQTQTL-------- 877
YL HS IIH + +H ++DF +A+ + + ++L
Sbjct: 123 YL---HSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKR 179
Query: 878 -ATIG---YMAPEYGVQGR-VSTRGDVYSYGIMLME 908
+G +MAPE + GR + DV+S+GI+L E
Sbjct: 180 YTVVGNPYWMAPEM-INGRSYDEKVDVFSFGIVLCE 214
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 724 ATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKV-FHQRYERALKSFQ--DECEVMKRI 779
A + F LG G FG+VY+AR Q +A+KV F + E+A Q E E+ +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 780 RHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYL 839
RH N++++ + LI+EY P G++ L D + + ++A AL Y
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 150
Query: 840 HFGHSTPIIH-------YMVAHISDFSIAKF-LNGQDQLSMQTQTLATIGYMAPEYGVQG 891
HS +IH ++ + IA F + S + T+ Y+ PE ++G
Sbjct: 151 ---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEM-IEG 206
Query: 892 RV-STRGDVYSYGIMLMETFTGKKP 915
R+ + D++S G++ E GK P
Sbjct: 207 RMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 724 ATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKV-FHQRYERALKSFQ--DECEVMKRI 779
A + F LG G FG+VY+AR Q +A+KV F + E+A Q E E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 780 RHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYL 839
RH N++++ + LI+EY P G++ L D + + ++A AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 127
Query: 840 HFGHSTPIIH-------YMVAHISDFSIAKF-LNGQDQLSMQTQTLATIGYMAPEYGVQG 891
HS +IH ++ + IA F + S + T+ Y+ PE ++G
Sbjct: 128 ---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEM-IEG 183
Query: 892 RV-STRGDVYSYGIMLMETFTGKKP 915
R+ + D++S G++ E GK P
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 63/246 (25%), Positives = 109/246 (44%), Gaps = 24/246 (9%)
Query: 721 LLQATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRYE-----RALKSFQDECE 774
+L+ T+ F K +LG G+FG+VY + +G +V + V + +A K DE
Sbjct: 13 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 775 VMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVAL 834
VM + + ++ +++ C + LIM+ MP G L + + + LN + +A
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 835 ALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGY 882
+ YL ++H +A I+DF AK L +++ I +
Sbjct: 131 GMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 187
Query: 883 MAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEV 941
MA E + + + DV+SYG+ + E T G KP D I E+S + LP +
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 247
Query: 942 IDTNLL 947
ID ++
Sbjct: 248 IDVYMI 253
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 63/246 (25%), Positives = 109/246 (44%), Gaps = 24/246 (9%)
Query: 721 LLQATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRYE-----RALKSFQDECE 774
+L+ T+ F K +LG G+FG+VY + +G +V + V + +A K DE
Sbjct: 13 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 775 VMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVAL 834
VM + + ++ +++ C + LIM+ MP G L + + + LN + +A
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 835 ALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGY 882
+ YL ++H +A I+DF AK L +++ I +
Sbjct: 131 GMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 187
Query: 883 MAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEV 941
MA E + + + DV+SYG+ + E T G KP D I E+S + LP +
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 247
Query: 942 IDTNLL 947
ID ++
Sbjct: 248 IDVYMI 253
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 63/246 (25%), Positives = 109/246 (44%), Gaps = 24/246 (9%)
Query: 721 LLQATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRYE-----RALKSFQDECE 774
+L+ T+ F K +LG G+FG+VY + +G +V + V + +A K DE
Sbjct: 15 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 73
Query: 775 VMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVAL 834
VM + + ++ +++ C + LIM+ MP G L + + + LN + +A
Sbjct: 74 VMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 132
Query: 835 ALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGY 882
+ YL ++H +A I+DF AK L +++ I +
Sbjct: 133 GMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 189
Query: 883 MAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEV 941
MA E + + + DV+SYG+ + E T G KP D I E+S + LP +
Sbjct: 190 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 249
Query: 942 IDTNLL 947
ID ++
Sbjct: 250 IDVYMI 255
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 100/223 (44%), Gaps = 24/223 (10%)
Query: 721 LLQATDRFSKNNLLGIGSFGSVYVA-RLQDG----MEVAVKVFHQRYE-RALKSFQDECE 774
+L+ T+ K +LG G+FG+VY + DG + VA+KV + +A K DE
Sbjct: 13 ILKETE-LRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAY 71
Query: 775 VMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVAL 834
VM + + +++ C + L+ + MP G L + + L LN + +A
Sbjct: 72 VMAGVGSPYVSRLLGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAK 130
Query: 835 ALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGY 882
+ YL ++H +A I+DF +A+ L+ + I +
Sbjct: 131 GMSYLE---DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKW 187
Query: 883 MAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGEL 924
MA E ++ R + + DV+SYG+ + E T G KP D I E+
Sbjct: 188 MALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREI 230
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 110/403 (27%), Positives = 163/403 (40%), Gaps = 114/403 (28%)
Query: 199 NNLSGAIPKEIGNLTKLKDIILNDNELRGEIPQEMGNLPYLVRLTLATNNLVGVVPFTIF 258
N L+ P + NLTKL DI++N+N++ P + NL L LTL N + + P
Sbjct: 73 NQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDPLK-- 126
Query: 259 NMSTLKKLSLLENTLWGSLPSRIDLSLPNVEFLNLGTNRFSGNIPSSITNASKLTVFQLR 318
N++ L +L L NT+ S I+ S LT Q
Sbjct: 127 NLTNLNRLELSSNTI------------------------------SDISALSGLTSLQQL 156
Query: 319 --GNSFSGFIPNTIGNLRNLEFLNIADNYLTSSTPELSFLSSLTNCQKIRVLILAGNPLD 376
GN + P + NL LE L+I+ N ++ ++S L+ LTN + LI N +
Sbjct: 157 NFGNQVTDLKP--LANLTTLERLDISSNKVS----DISVLAKLTNLES---LIATNNQIS 207
Query: 377 GILPSSI-GNLS-ISLERFQMFNCRISGKIPQVISXXXXXXXXXXXXXXXXXSIPVTFSR 434
I P I NL +SL Q+ + T +
Sbjct: 208 DITPLGILTNLDELSLNGNQLKDIG-------------------------------TLAS 236
Query: 435 LLNLQGLGLAFNKLARSIPDEICHLAKLDKLILHGNKFSGAIPSCSGNLTSLRALYLGSN 494
L NL L LA N+++ P + L KL +L L N+ S P LT+L L L N
Sbjct: 237 LTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAG--LTALTNLELNEN 292
Query: 495 RFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRNNLSGDIPITIGG 554
+ L+DI P+S NLK + L L NN+S P++
Sbjct: 293 Q-----------LEDI-----------SPIS----NLKNLTYLTLYFNNISDISPVS--S 324
Query: 555 LKNLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNKISGVIP 597
L LQ+LF NN++ S + L+++ L N+IS + P
Sbjct: 325 LTKLQRLFFYNNKVSD--VSSLANLTNINWLSAGHNQISDLTP 365
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 121/277 (43%), Gaps = 73/277 (26%)
Query: 88 LGNLSSLETLDLSHNKLSG-NIPSSIFNMHT-------------------LKLLDFRDNQ 127
L NL++LE LD+S NK+S ++ + + N+ + L L NQ
Sbjct: 168 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQ 227
Query: 128 L--FGSLSSFIFNMSSMLGIDLSINRFSGELPANICXXXXXXXXXXXGRNMFHGKIPSTL 185
L G+L+S ++++ +DL+ N+ S P L
Sbjct: 228 LKDIGTLAS----LTNLTDLDLANNQISNLAP---------------------------L 256
Query: 186 SKCKQLEGLYLRFNNLSGAIPKEIGNLTKLKDIILNDNELRGEIPQEMGNLPYLVRLTLA 245
S +L L L N +S P + LT L ++ LN+N+L P + NL L LTL
Sbjct: 257 SGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLY 312
Query: 246 TNNLVGVVPFTIFNMSTLKKLSLLENTLWGSLPSRIDLSLPNVEFLNLGTNRFSGNIPSS 305
NN+ + P + +++ L++L N + + S +L+ N+ +L+ G N+ S P
Sbjct: 313 FNNISDISP--VSSLTKLQRLFFYNNKV-SDVSSLANLT--NINWLSAGHNQISDLTP-- 365
Query: 306 ITNASKLTVFQLRGNSFSGF---------IPNTIGNL 333
+ N +++T L +++ IPNT+ N+
Sbjct: 366 LANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNV 402
Score = 34.7 bits (78), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 35/159 (22%)
Query: 437 NLQGLGLAFNKLARSIPDEICHLAKLDKLILHGNKFSGAIPSCSGNLTSLRALYLGSNRF 496
NL + + N+L P + +L KL ++++ N+ + P NLT+L L L +N+
Sbjct: 64 NLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPLA--NLTNLTGLTLFNNQI 119
Query: 497 TSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRNNLSGDIPITIGGLK 556
T P + NL ++ ++SSN++ DI L GL
Sbjct: 120 TDIDP--LKNLTNLNRLELSSNTIS-----DISAL---------------------SGLT 151
Query: 557 NLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNKISGV 595
+LQ+L N + + + L++LE LD+S NK+S +
Sbjct: 152 SLQQLNFGNQVTD---LKPLANLTTLERLDISSNKVSDI 187
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 112/262 (42%), Gaps = 52/262 (19%)
Query: 688 LKWKLIRCWKSITGSSNDGINSPQAIRRFSYHELLQATDRFSKNNL-----LGIGSFGSV 742
++WK+I +S G+S I+ Q Y+E + F +NNL LG G+FG V
Sbjct: 14 VRWKII---ESYEGNSYTFIDPTQ----LPYNEKWE----FPRNNLQFGKTLGAGAFGKV 62
Query: 743 YVARL-----QDG-MEVAVKVF----HQRYERALKSFQDECEVMKRI-RHRNLVKIISAC 791
A +D ++VAVK+ H + AL S E ++M + +H N+V ++ AC
Sbjct: 63 VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS---ELKIMSHLGQHENIVNLLGAC 119
Query: 792 SNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGH-------- 843
++ +I EY G L N L + +L+ I + LHF
Sbjct: 120 THGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAF 179
Query: 844 --STPIIHY------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGV 889
S IH VA I DF +A+ + ++ + +MAPE
Sbjct: 180 LASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIF 239
Query: 890 QGRVSTRGDVYSYGIMLMETFT 911
+ + DV+SYGI+L E F+
Sbjct: 240 DCVYTVQSDVWSYGILLWEIFS 261
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 52/225 (23%), Positives = 101/225 (44%), Gaps = 27/225 (12%)
Query: 717 SYHELLQATDRFSKN---------NLLGIGSFGSVYVARLQ----DGMEVAVKVFHQRY- 762
+Y + +A +F+K ++G G FG V RL+ + VA+K Y
Sbjct: 25 TYEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYT 84
Query: 763 ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDI 822
E+ + F E +M + H N+V + + +++E+M NG+L+ L +
Sbjct: 85 EKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTV 144
Query: 823 FQRLNIMIDVALALEYLH---------FGHSTPIIHYMVAHISDFSIAKFLNGQDQLSMQ 873
Q + ++ +A + YL + + +V +SDF +++ + D ++
Sbjct: 145 IQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIE-DDPEAVY 203
Query: 874 TQTLATIG--YMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKP 915
T T I + APE + ++ DV+SYGI++ E + G++P
Sbjct: 204 TTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 248
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 25/261 (9%)
Query: 706 GINSPQAIRRFSYHELLQATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRYE- 763
GI S +A + + +L+ T+ F K +L G+FG+VY + +G +V + V +
Sbjct: 4 GIRSGEAPNQ-ALLRILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELRE 61
Query: 764 ----RALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCM 819
+A K DE VM + + ++ +++ C + LIM+ MP G L + +
Sbjct: 62 ATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDN 120
Query: 820 LDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQ 867
+ LN + +A + YL ++H +A I+DF +AK L +
Sbjct: 121 IGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 177
Query: 868 DQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSL 926
++ I +MA E + + + DV+SYG+ + E T G KP D I E+S
Sbjct: 178 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 237
Query: 927 SRWVNDLLPISVMEVIDTNLL 947
+ LP + ID ++
Sbjct: 238 ILEKGERLPQPPICTIDVYMI 258
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 56/203 (27%), Positives = 94/203 (46%), Gaps = 18/203 (8%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQDG-MEVAVKV-FHQRYER--ALKSFQDECEVMKRIRH 781
D F LG G FG+VY+AR + VA+KV F + E+ + E E+ + H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHF 841
N++++ + + LI+EY P G L L +C D + IM ++A AL Y
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKEL-QKSCTFDEQRTATIMEELADALMYC-- 139
Query: 842 GHSTPIIHYMV-------AHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQGRV 893
H +IH + + IA F S++ +T+ T+ Y+ PE ++GR+
Sbjct: 140 -HGKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMCGTLDYLPPEM-IEGRM 197
Query: 894 -STRGDVYSYGIMLMETFTGKKP 915
+ + D++ G++ E G P
Sbjct: 198 HNEKVDLWCIGVLCYELLVGNPP 220
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 107/246 (43%), Gaps = 24/246 (9%)
Query: 721 LLQATDRFSKNNLLGIGSFGSVYVA-RLQDGMEVAVKVFHQRYERAL-----KSFQDECE 774
+L+ T+ F K +LG G+FG+VY + +G +V + V A K DE
Sbjct: 45 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAY 103
Query: 775 VMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVAL 834
VM + + ++ +++ C + LI + MP G L + + + LN + +A
Sbjct: 104 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 162
Query: 835 ALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGY 882
+ YL ++H +A I+DF +AK L +++ I +
Sbjct: 163 GMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 219
Query: 883 MAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEV 941
MA E + + + DV+SYG+ + E T G KP D I E+S + LP +
Sbjct: 220 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 279
Query: 942 IDTNLL 947
ID ++
Sbjct: 280 IDVYMI 285
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 25/261 (9%)
Query: 706 GINSPQAIRRFSYHELLQATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRYE- 763
GI S +A + + +L+ T+ F K +LG G+FG+VY + +G +V + V +
Sbjct: 4 GIRSGEAPNQ-ALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE 61
Query: 764 ----RALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCM 819
+A K DE VM + + ++ +++ C + LI + MP G L + +
Sbjct: 62 ATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDN 120
Query: 820 LDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQ 867
+ LN + +A + YL ++H +A I+DF +AK L +
Sbjct: 121 IGSQYLLNWCVQIAKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 177
Query: 868 DQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSL 926
++ I +MA E + + + DV+SYG+ + E T G KP D I E+S
Sbjct: 178 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 237
Query: 927 SRWVNDLLPISVMEVIDTNLL 947
+ LP + ID ++
Sbjct: 238 ILEKGERLPQPPICTIDVYMI 258
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 110/403 (27%), Positives = 163/403 (40%), Gaps = 114/403 (28%)
Query: 199 NNLSGAIPKEIGNLTKLKDIILNDNELRGEIPQEMGNLPYLVRLTLATNNLVGVVPFTIF 258
N L+ P + NLTKL DI++N+N++ P + NL L LTL N + + P
Sbjct: 78 NQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDPLK-- 131
Query: 259 NMSTLKKLSLLENTLWGSLPSRIDLSLPNVEFLNLGTNRFSGNIPSSITNASKLTVFQLR 318
N++ L +L L NT+ S I+ S LT Q
Sbjct: 132 NLTNLNRLELSSNTI------------------------------SDISALSGLTSLQQL 161
Query: 319 --GNSFSGFIPNTIGNLRNLEFLNIADNYLTSSTPELSFLSSLTNCQKIRVLILAGNPLD 376
GN + P + NL LE L+I+ N ++ ++S L+ LTN + LI N +
Sbjct: 162 SFGNQVTDLKP--LANLTTLERLDISSNKVS----DISVLAKLTNLES---LIATNNQIS 212
Query: 377 GILPSSI-GNLS-ISLERFQMFNCRISGKIPQVISXXXXXXXXXXXXXXXXXSIPVTFSR 434
I P I NL +SL Q+ + T +
Sbjct: 213 DITPLGILTNLDELSLNGNQLKDIG-------------------------------TLAS 241
Query: 435 LLNLQGLGLAFNKLARSIPDEICHLAKLDKLILHGNKFSGAIPSCSGNLTSLRALYLGSN 494
L NL L LA N+++ P + L KL +L L N+ S P LT+L L L N
Sbjct: 242 LTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAG--LTALTNLELNEN 297
Query: 495 RFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRNNLSGDIPITIGG 554
+ L+DI P+S NLK + L L NN+S P++
Sbjct: 298 Q-----------LEDI-----------SPIS----NLKNLTYLTLYFNNISDISPVS--S 329
Query: 555 LKNLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNKISGVIP 597
L LQ+LF NN++ S + L+++ L N+IS + P
Sbjct: 330 LTKLQRLFFYNNKVSD--VSSLANLTNINWLSAGHNQISDLTP 370
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 121/277 (43%), Gaps = 73/277 (26%)
Query: 88 LGNLSSLETLDLSHNKLSG-NIPSSIFNMHT-------------------LKLLDFRDNQ 127
L NL++LE LD+S NK+S ++ + + N+ + L L NQ
Sbjct: 173 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQ 232
Query: 128 L--FGSLSSFIFNMSSMLGIDLSINRFSGELPANICXXXXXXXXXXXGRNMFHGKIPSTL 185
L G+L+S ++++ +DL+ N+ S P L
Sbjct: 233 LKDIGTLAS----LTNLTDLDLANNQISNLAP---------------------------L 261
Query: 186 SKCKQLEGLYLRFNNLSGAIPKEIGNLTKLKDIILNDNELRGEIPQEMGNLPYLVRLTLA 245
S +L L L N +S P + LT L ++ LN+N+L P + NL L LTL
Sbjct: 262 SGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLY 317
Query: 246 TNNLVGVVPFTIFNMSTLKKLSLLENTLWGSLPSRIDLSLPNVEFLNLGTNRFSGNIPSS 305
NN+ + P + +++ L++L N + + S +L+ N+ +L+ G N+ S P
Sbjct: 318 FNNISDISP--VSSLTKLQRLFFYNNKV-SDVSSLANLT--NINWLSAGHNQISDLTP-- 370
Query: 306 ITNASKLTVFQLRGNSFSGF---------IPNTIGNL 333
+ N +++T L +++ IPNT+ N+
Sbjct: 371 LANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNV 407
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 35/159 (22%)
Query: 437 NLQGLGLAFNKLARSIPDEICHLAKLDKLILHGNKFSGAIPSCSGNLTSLRALYLGSNRF 496
NL + + N+L P + +L KL ++++ N+ + P NLT+L L L +N+
Sbjct: 69 NLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPLA--NLTNLTGLTLFNNQI 124
Query: 497 TSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRNNLSGDIPITIGGLK 556
T P + NL ++ ++SSN++ DI L GL
Sbjct: 125 TDIDP--LKNLTNLNRLELSSNTIS-----DISAL---------------------SGLT 156
Query: 557 NLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNKISGV 595
+LQ+L N + + + L++LE LD+S NK+S +
Sbjct: 157 SLQQLSFGNQVTD---LKPLANLTTLERLDISSNKVSDI 192
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 92/209 (44%), Gaps = 37/209 (17%)
Query: 734 LGIGSFGSVYVARLQ------DGMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVK 786
LG G+FG VY ++ ++VAVK + E+ F E ++ ++ H+N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 787 IISACSNDDFKALIMEYMPNGSLENRLY---------SGTCMLDIFQRLNIMIDVALALE 837
I + +++E M G L++ L S MLD+ L++ D+A +
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 155
Query: 838 YLHFGHSTPIIHY---------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGY 882
YL H IH VA I DF +A+ + + + +
Sbjct: 156 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 212
Query: 883 MAPEYGVQGRVSTRGDVYSYGIMLMETFT 911
M PE ++G +++ D +S+G++L E F+
Sbjct: 213 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 62/246 (25%), Positives = 109/246 (44%), Gaps = 24/246 (9%)
Query: 721 LLQATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRYE-----RALKSFQDECE 774
+L+ T+ F K +LG G+FG+VY + +G +V + V + +A K DE
Sbjct: 11 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 775 VMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVAL 834
VM + + ++ +++ C + LI + MP G L + + + LN + +A
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 835 ALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGY 882
+ YL ++H +A I+DF +AK L +++ I +
Sbjct: 129 GMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 883 MAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEV 941
MA E + + + DV+SYG+ + E T G KP D I E+S + LP +
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 245
Query: 942 IDTNLL 947
ID ++
Sbjct: 246 IDVYMI 251
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 163/404 (40%), Gaps = 115/404 (28%)
Query: 199 NNLSGAIPKEIGNLTKLKDIILNDNELRGEIPQEMGNLPYLVRLTLATNNLVGVVPFTIF 258
N L+ P + NLTKL DI++N+N++ P + NL L LTL N + + P
Sbjct: 73 NQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDPLK-- 126
Query: 259 NMSTLKKLSLLENTLWGSLPSRIDLSLPNVEFLNLGTNRFSGNIPSSITNASKLTVFQ-- 316
N++ L +L L NT+ S I+ S LT Q
Sbjct: 127 NLTNLNRLELSSNTI------------------------------SDISALSGLTSLQQL 156
Query: 317 -LRGNSFSGFIPNTIGNLRNLEFLNIADNYLTSSTPELSFLSSLTNCQKIRVLILAGNPL 375
N + P + NL LE L+I+ N ++ ++S L+ LTN + LI N +
Sbjct: 157 SFSSNQVTDLKP--LANLTTLERLDISSNKVS----DISVLAKLTNLES---LIATNNQI 207
Query: 376 DGILPSSI-GNLS-ISLERFQMFNCRISGKIPQVISXXXXXXXXXXXXXXXXXSIPVTFS 433
I P I NL +SL Q+ + T +
Sbjct: 208 SDITPLGILTNLDELSLNGNQLKDIG-------------------------------TLA 236
Query: 434 RLLNLQGLGLAFNKLARSIPDEICHLAKLDKLILHGNKFSGAIPSCSGNLTSLRALYLGS 493
L NL L LA N+++ P + L KL +L L N+ S P LT+L L L
Sbjct: 237 SLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAG--LTALTNLELNE 292
Query: 494 NRFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRNNLSGDIPITIG 553
N+ L+DI P+S NLK + L L NN+S P++
Sbjct: 293 NQ-----------LEDI-----------SPIS----NLKNLTYLTLYFNNISDISPVS-- 324
Query: 554 GLKNLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNKISGVIP 597
L LQ+LF +NN++ S + L+++ L N+IS + P
Sbjct: 325 SLTKLQRLFFSNNKVSD--VSSLANLTNINWLSAGHNQISDLTP 366
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 34/159 (21%)
Query: 437 NLQGLGLAFNKLARSIPDEICHLAKLDKLILHGNKFSGAIPSCSGNLTSLRALYLGSNRF 496
NL + + N+L P + +L KL ++++ N+ + P NLT+L L L +N+
Sbjct: 64 NLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPLA--NLTNLTGLTLFNNQI 119
Query: 497 TSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRNNLSGDIPITIGGLK 556
T P + NL ++ ++SSN++ DI L GL
Sbjct: 120 TDIDP--LKNLTNLNRLELSSNTIS-----DISAL---------------------SGLT 151
Query: 557 NLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNKISGV 595
+LQ+L ++N++ P + L++LE LD+S NK+S +
Sbjct: 152 SLQQLSFSSNQVTDLKP--LANLTTLERLDISSNKVSDI 188
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 119/279 (42%), Gaps = 77/279 (27%)
Query: 88 LGNLSSLETLDLSHNKLSG-NIPSSIFNMHT-------------------LKLLDFRDNQ 127
L NL++LE LD+S NK+S ++ + + N+ + L L NQ
Sbjct: 169 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQ 228
Query: 128 L--FGSLSSFIFNMSSMLGIDLSINRFSGELPANICXXXXXXXXXXXGRNMFHGKIPSTL 185
L G+L+S ++++ +DL+ N+ S P L
Sbjct: 229 LKDIGTLAS----LTNLTDLDLANNQISNLAP---------------------------L 257
Query: 186 SKCKQLEGLYLRFNNLSGAIPKEIGNLTKLKDIILNDNELRGEIPQEMGNLPYLVRLTLA 245
S +L L L N +S P + LT L ++ LN+N+L P + NL L LTL
Sbjct: 258 SGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLY 313
Query: 246 TNNLVGVVPFTIFNMSTLKKLSLL--ENTLWGSLPSRIDLSLPNVEFLNLGTNRFSGNIP 303
NN+ + P +S+L KL L N + S +L+ N+ +L+ G N+ S P
Sbjct: 314 FNNISDISP-----VSSLTKLQRLFFSNNKVSDVSSLANLT--NINWLSAGHNQISDLTP 366
Query: 304 SSITNASKLTVFQLRGNSFSGF---------IPNTIGNL 333
+ N +++T L +++ IPNT+ N+
Sbjct: 367 --LANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNV 403
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 62/246 (25%), Positives = 109/246 (44%), Gaps = 24/246 (9%)
Query: 721 LLQATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRYE-----RALKSFQDECE 774
+L+ T+ F K +LG G+FG+VY + +G +V + V + +A K DE
Sbjct: 13 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 775 VMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVAL 834
VM + + ++ +++ C + LI + MP G L + + + LN + +A
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 835 ALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGY 882
+ YL ++H +A I+DF +AK L +++ I +
Sbjct: 131 GMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 187
Query: 883 MAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEV 941
MA E + + + DV+SYG+ + E T G KP D I E+S + LP +
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 247
Query: 942 IDTNLL 947
ID ++
Sbjct: 248 IDVYMI 253
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 62/246 (25%), Positives = 109/246 (44%), Gaps = 24/246 (9%)
Query: 721 LLQATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRYE-----RALKSFQDECE 774
+L+ T+ F K +LG G+FG+VY + +G +V + V + +A K DE
Sbjct: 17 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 75
Query: 775 VMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVAL 834
VM + + ++ +++ C + LI + MP G L + + + LN + +A
Sbjct: 76 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 134
Query: 835 ALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGY 882
+ YL ++H +A I+DF +AK L +++ I +
Sbjct: 135 GMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 191
Query: 883 MAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEV 941
MA E + + + DV+SYG+ + E T G KP D I E+S + LP +
Sbjct: 192 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 251
Query: 942 IDTNLL 947
ID ++
Sbjct: 252 IDVYMI 257
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 62/246 (25%), Positives = 109/246 (44%), Gaps = 24/246 (9%)
Query: 721 LLQATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRYE-----RALKSFQDECE 774
+L+ T+ F K +LG G+FG+VY + +G +V + V + +A K DE
Sbjct: 14 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 775 VMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVAL 834
VM + + ++ +++ C + LI + MP G L + + + LN + +A
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 131
Query: 835 ALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGY 882
+ YL ++H +A I+DF +AK L +++ I +
Sbjct: 132 GMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 883 MAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEV 941
MA E + + + DV+SYG+ + E T G KP D I E+S + LP +
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 248
Query: 942 IDTNLL 947
ID ++
Sbjct: 249 IDVYMI 254
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 62/246 (25%), Positives = 109/246 (44%), Gaps = 24/246 (9%)
Query: 721 LLQATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRYE-----RALKSFQDECE 774
+L+ T+ F K +LG G+FG+VY + +G +V + V + +A K DE
Sbjct: 11 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 775 VMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVAL 834
VM + + ++ +++ C + LI + MP G L + + + LN + +A
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 835 ALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGY 882
+ YL ++H +A I+DF +AK L +++ I +
Sbjct: 129 GMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 883 MAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEV 941
MA E + + + DV+SYG+ + E T G KP D I E+S + LP +
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 245
Query: 942 IDTNLL 947
ID ++
Sbjct: 246 IDVYMI 251
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 62/246 (25%), Positives = 109/246 (44%), Gaps = 24/246 (9%)
Query: 721 LLQATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRYE-----RALKSFQDECE 774
+L+ T+ F K +LG G+FG+VY + +G +V + V + +A K DE
Sbjct: 5 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 63
Query: 775 VMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVAL 834
VM + + ++ +++ C + LI + MP G L + + + LN + +A
Sbjct: 64 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 122
Query: 835 ALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGY 882
+ YL ++H +A I+DF +AK L +++ I +
Sbjct: 123 GMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 179
Query: 883 MAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEV 941
MA E + + + DV+SYG+ + E T G KP D I E+S + LP +
Sbjct: 180 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 239
Query: 942 IDTNLL 947
ID ++
Sbjct: 240 IDVYMI 245
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 62/246 (25%), Positives = 109/246 (44%), Gaps = 24/246 (9%)
Query: 721 LLQATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRYE-----RALKSFQDECE 774
+L+ T+ F K +LG G+FG+VY + +G +V + V + +A K DE
Sbjct: 11 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 775 VMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVAL 834
VM + + ++ +++ C + LI + MP G L + + + LN + +A
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 835 ALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGY 882
+ YL ++H +A I+DF +AK L +++ I +
Sbjct: 129 GMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 883 MAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEV 941
MA E + + + DV+SYG+ + E T G KP D I E+S + LP +
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 245
Query: 942 IDTNLL 947
ID ++
Sbjct: 246 IDVYMI 251
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 62/246 (25%), Positives = 109/246 (44%), Gaps = 24/246 (9%)
Query: 721 LLQATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRYE-----RALKSFQDECE 774
+L+ T+ F K +LG G+FG+VY + +G +V + V + +A K DE
Sbjct: 14 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 775 VMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVAL 834
VM + + ++ +++ C + LI + MP G L + + + LN + +A
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 131
Query: 835 ALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGY 882
+ YL ++H +A I+DF +AK L +++ I +
Sbjct: 132 GMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 883 MAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEV 941
MA E + + + DV+SYG+ + E T G KP D I E+S + LP +
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 248
Query: 942 IDTNLL 947
ID ++
Sbjct: 249 IDVYMI 254
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 62/246 (25%), Positives = 109/246 (44%), Gaps = 24/246 (9%)
Query: 721 LLQATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRYE-----RALKSFQDECE 774
+L+ T+ F K +LG G+FG+VY + +G +V + V + +A K DE
Sbjct: 14 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 775 VMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVAL 834
VM + + ++ +++ C + LI + MP G L + + + LN + +A
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 131
Query: 835 ALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGY 882
+ YL ++H +A I+DF +AK L +++ I +
Sbjct: 132 GMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 883 MAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEV 941
MA E + + + DV+SYG+ + E T G KP D I E+S + LP +
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 248
Query: 942 IDTNLL 947
ID ++
Sbjct: 249 IDVYMI 254
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 23/205 (11%)
Query: 731 NNLLGIGSFGSVYVARLQDG----MEVAVKVFHQRYE-RALKSFQDECEVMKRIRHRNLV 785
N ++G G FG VY L D + AVK ++ + + F E +MK H N++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 786 KIISACSNDDFKALI-MEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHS 844
++ C + L+ + YM +G L N + + T + + + VA ++YL S
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---S 150
Query: 845 TPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLAT--IGYMAPEYGVQ 890
+H +A ++DF +A+ + ++ S+ +T A + +MA E
Sbjct: 151 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQT 210
Query: 891 GRVSTRGDVYSYGIMLMETFTGKKP 915
+ +T+ DV+S+G++L E T P
Sbjct: 211 QKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 23/205 (11%)
Query: 731 NNLLGIGSFGSVYVARLQDG----MEVAVKVFHQRYE-RALKSFQDECEVMKRIRHRNLV 785
N ++G G FG VY L D + AVK ++ + + F E +MK H N++
Sbjct: 54 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 786 KIISACSNDDFKALI-MEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHS 844
++ C + L+ + YM +G L N + + T + + + VA ++YL S
Sbjct: 114 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---S 170
Query: 845 TPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLAT--IGYMAPEYGVQ 890
+H +A ++DF +A+ + ++ S+ +T A + +MA E
Sbjct: 171 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 230
Query: 891 GRVSTRGDVYSYGIMLMETFTGKKP 915
+ +T+ DV+S+G++L E T P
Sbjct: 231 QKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 92/209 (44%), Gaps = 37/209 (17%)
Query: 734 LGIGSFGSVYVARLQ------DGMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVK 786
LG G+FG VY ++ ++VAVK + E+ F E ++ ++ H+N+V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 787 IISACSNDDFKALIMEYMPNGSLENRLY---------SGTCMLDIFQRLNIMIDVALALE 837
I + +++E M G L++ L S MLD+ L++ D+A +
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 169
Query: 838 YLHFGHSTPIIHY---------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGY 882
YL H IH VA I DF +A+ + + + +
Sbjct: 170 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 226
Query: 883 MAPEYGVQGRVSTRGDVYSYGIMLMETFT 911
M PE ++G +++ D +S+G++L E F+
Sbjct: 227 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 62/246 (25%), Positives = 109/246 (44%), Gaps = 24/246 (9%)
Query: 721 LLQATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRYE-----RALKSFQDECE 774
+L+ T+ F K +LG G+FG+VY + +G +V + V + +A K DE
Sbjct: 8 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 66
Query: 775 VMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVAL 834
VM + + ++ +++ C + LI + MP G L + + + LN + +A
Sbjct: 67 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAE 125
Query: 835 ALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGY 882
+ YL ++H +A I+DF +AK L +++ I +
Sbjct: 126 GMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 182
Query: 883 MAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEV 941
MA E + + + DV+SYG+ + E T G KP D I E+S + LP +
Sbjct: 183 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 242
Query: 942 IDTNLL 947
ID ++
Sbjct: 243 IDVYMI 248
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 23/205 (11%)
Query: 731 NNLLGIGSFGSVYVARLQDG----MEVAVKVFHQRYE-RALKSFQDECEVMKRIRHRNLV 785
N ++G G FG VY L D + AVK ++ + + F E +MK H N++
Sbjct: 53 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 786 KIISACSNDDFKALI-MEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHS 844
++ C + L+ + YM +G L N + + T + + + VA ++YL S
Sbjct: 113 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---S 169
Query: 845 TPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLAT--IGYMAPEYGVQ 890
+H +A ++DF +A+ + ++ S+ +T A + +MA E
Sbjct: 170 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 229
Query: 891 GRVSTRGDVYSYGIMLMETFTGKKP 915
+ +T+ DV+S+G++L E T P
Sbjct: 230 QKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 91/209 (43%), Gaps = 37/209 (17%)
Query: 734 LGIGSFGSVYVARLQ------DGMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVK 786
LG G+FG VY ++ ++VAVK + E+ F E ++ + H+N+V+
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 787 IISACSNDDFKALIMEYMPNGSLENRLY---------SGTCMLDIFQRLNIMIDVALALE 837
I + +++E M G L++ L S MLD+ L++ D+A +
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 146
Query: 838 YLHFGHSTPIIHY---------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGY 882
YL H IH VA I DF +A+ + + + +
Sbjct: 147 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 203
Query: 883 MAPEYGVQGRVSTRGDVYSYGIMLMETFT 911
M PE ++G +++ D +S+G++L E F+
Sbjct: 204 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 23/205 (11%)
Query: 731 NNLLGIGSFGSVYVARLQDG----MEVAVKVFHQRYE-RALKSFQDECEVMKRIRHRNLV 785
N ++G G FG VY L D + AVK ++ + + F E +MK H N++
Sbjct: 27 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 786 KIISACSNDDFKALI-MEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHS 844
++ C + L+ + YM +G L N + + T + + + VA ++YL S
Sbjct: 87 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---S 143
Query: 845 TPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLAT--IGYMAPEYGVQ 890
+H +A ++DF +A+ + ++ S+ +T A + +MA E
Sbjct: 144 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 203
Query: 891 GRVSTRGDVYSYGIMLMETFTGKKP 915
+ +T+ DV+S+G++L E T P
Sbjct: 204 QKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 70/279 (25%), Positives = 116/279 (41%), Gaps = 42/279 (15%)
Query: 723 QATDRFSKNNLLGIGSFGSVYVA-RLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRH 781
Q + F LG GS+GSVY A + G VA+K E L+ E +M++
Sbjct: 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIK--QVPVESDLQEIIKEISIMQQCDS 83
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLEN--RLYSGTCMLDIFQRLNIMIDVALALEYL 839
++VK + + ++MEY GS+ + RL + T D + I+ LEYL
Sbjct: 84 PHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTED--EIATILQSTLKGLEYL 141
Query: 840 HFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEY 887
HF IH + A ++DF +A L D ++ + + T +MAPE
Sbjct: 142 HFMRK---IHRDIKAGNILLNTEGHAKLADFGVAGQLT--DXMAKRNXVIGTPFWMAPEV 196
Query: 888 GVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLL 947
+ + D++S GI +E GK P D+ P+ + +I TN
Sbjct: 197 IQEIGYNCVADIWSLGITAIEMAEGKPP--------------YADIHPMRAIFMIPTN-- 240
Query: 948 SGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIV 986
F E + + +C ++SP +R A +++
Sbjct: 241 --PPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLL 277
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 93/214 (43%), Gaps = 47/214 (21%)
Query: 734 LGIGSFGSVYVARLQ------DGMEVAVKVFHQRYERALKSFQDECE------VMKRIRH 781
LG G+FG VY ++ ++VAVK + + S QDE + ++ + H
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-----VCSEQDELDFLMEALIISKFNH 93
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLY---------SGTCMLDIFQRLNIMIDV 832
+N+V+ I + +++E M G L++ L S MLD+ L++ D+
Sbjct: 94 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDI 150
Query: 833 ALALEYLHFGHSTPIIHY---------------MVAHISDFSIAKFLNGQDQLSMQTQTL 877
A +YL H IH VA I DF +A+ + +
Sbjct: 151 ACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 207
Query: 878 ATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT 911
+ +M PE ++G +++ D +S+G++L E F+
Sbjct: 208 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 51/204 (25%), Positives = 84/204 (41%), Gaps = 20/204 (9%)
Query: 728 FSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRN 783
F +LG GSF + +AR L E A+K+ +R+ E + E +VM R+ H
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGH 843
VK+ +D+ + Y NG L + + R ++ ALEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 147
Query: 844 STPIIHY------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQG 891
IIH M I+DF AK L+ + + + + T Y++PE +
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
D+++ G ++ + G P
Sbjct: 208 SACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 91/209 (43%), Gaps = 37/209 (17%)
Query: 734 LGIGSFGSVYVARLQ------DGMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVK 786
LG G+FG VY ++ ++VAVK + E+ F E ++ + H+N+V+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 787 IISACSNDDFKALIMEYMPNGSLENRLY---------SGTCMLDIFQRLNIMIDVALALE 837
I + +++E M G L++ L S MLD+ L++ D+A +
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 154
Query: 838 YLHFGHSTPIIHY---------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGY 882
YL H IH VA I DF +A+ + + + +
Sbjct: 155 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 211
Query: 883 MAPEYGVQGRVSTRGDVYSYGIMLMETFT 911
M PE ++G +++ D +S+G++L E F+
Sbjct: 212 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 23/205 (11%)
Query: 731 NNLLGIGSFGSVYVARLQDG----MEVAVKVFHQRYE-RALKSFQDECEVMKRIRHRNLV 785
N ++G G FG VY L D + AVK ++ + + F E +MK H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 786 KIISACSNDDFKALI-MEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHS 844
++ C + L+ + YM +G L N + + T + + + VA ++YL S
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---S 151
Query: 845 TPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLAT--IGYMAPEYGVQ 890
+H +A ++DF +A+ + ++ S+ +T A + +MA E
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 211
Query: 891 GRVSTRGDVYSYGIMLMETFTGKKP 915
+ +T+ DV+S+G++L E T P
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 93/214 (43%), Gaps = 47/214 (21%)
Query: 734 LGIGSFGSVYVARLQ------DGMEVAVKVFHQRYERALKSFQDECE------VMKRIRH 781
LG G+FG VY ++ ++VAVK + + S QDE + ++ + H
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-----VCSEQDELDFLMEALIISKFNH 99
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLY---------SGTCMLDIFQRLNIMIDV 832
+N+V+ I + +++E M G L++ L S MLD+ L++ D+
Sbjct: 100 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDI 156
Query: 833 ALALEYLHFGHSTPIIHY---------------MVAHISDFSIAKFLNGQDQLSMQTQTL 877
A +YL H IH VA I DF +A+ + +
Sbjct: 157 ACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 213
Query: 878 ATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT 911
+ +M PE ++G +++ D +S+G++L E F+
Sbjct: 214 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 93/214 (43%), Gaps = 47/214 (21%)
Query: 734 LGIGSFGSVYVARLQ------DGMEVAVKVFHQRYERALKSFQDECE------VMKRIRH 781
LG G+FG VY ++ ++VAVK + + S QDE + ++ + H
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-----VCSEQDELDFLMEALIISKFNH 109
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLY---------SGTCMLDIFQRLNIMIDV 832
+N+V+ I + +++E M G L++ L S MLD+ L++ D+
Sbjct: 110 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDI 166
Query: 833 ALALEYLHFGHSTPIIHY---------------MVAHISDFSIAKFLNGQDQLSMQTQTL 877
A +YL H IH VA I DF +A+ + +
Sbjct: 167 ACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 223
Query: 878 ATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT 911
+ +M PE ++G +++ D +S+G++L E F+
Sbjct: 224 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 23/205 (11%)
Query: 731 NNLLGIGSFGSVYVARLQDG----MEVAVKVFHQRYE-RALKSFQDECEVMKRIRHRNLV 785
N ++G G FG VY L D + AVK ++ + + F E +MK H N++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 786 KIISACSNDDFKALI-MEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHS 844
++ C + L+ + YM +G L N + + T + + + VA ++YL S
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---S 149
Query: 845 TPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLAT--IGYMAPEYGVQ 890
+H +A ++DF +A+ + ++ S+ +T A + +MA E
Sbjct: 150 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 209
Query: 891 GRVSTRGDVYSYGIMLMETFTGKKP 915
+ +T+ DV+S+G++L E T P
Sbjct: 210 QKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 54/205 (26%), Positives = 99/205 (48%), Gaps = 25/205 (12%)
Query: 734 LGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACS 792
LG G+FG VY A+ ++ G A KV + E L+ + E E++ H +VK++ A
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 793 NDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRL---NIMIDVALALEYLHFGHSTPIIH 849
+D +++E+ P G+++ ML++ + L I + LE L+F HS IIH
Sbjct: 79 HDGKLWIMIEFCPGGAVD------AIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIH 132
Query: 850 -------YMVAHISDFSIAKF-LNGQDQLSMQTQT--LATIGYMAPEYGVQGRVST---- 895
++ D +A F ++ ++ ++Q + + T +MAPE + +
Sbjct: 133 RDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYD 192
Query: 896 -RGDVYSYGIMLMETFTGKKPTDEI 919
+ D++S GI L+E + P E+
Sbjct: 193 YKADIWSLGITLIEMAQIEPPHHEL 217
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 54/205 (26%), Positives = 99/205 (48%), Gaps = 25/205 (12%)
Query: 734 LGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACS 792
LG G+FG VY A+ ++ G A KV + E L+ + E E++ H +VK++ A
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 793 NDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRL---NIMIDVALALEYLHFGHSTPIIH 849
+D +++E+ P G+++ ML++ + L I + LE L+F HS IIH
Sbjct: 87 HDGKLWIMIEFCPGGAVD------AIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIH 140
Query: 850 -------YMVAHISDFSIAKF-LNGQDQLSMQTQT--LATIGYMAPEYGVQGRVST---- 895
++ D +A F ++ ++ ++Q + + T +MAPE + +
Sbjct: 141 RDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYD 200
Query: 896 -RGDVYSYGIMLMETFTGKKPTDEI 919
+ D++S GI L+E + P E+
Sbjct: 201 YKADIWSLGITLIEMAQIEPPHHEL 225
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 91/209 (43%), Gaps = 37/209 (17%)
Query: 734 LGIGSFGSVYVARLQ------DGMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVK 786
LG G+FG VY ++ ++VAVK + E+ F E ++ + H+N+V+
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 787 IISACSNDDFKALIMEYMPNGSLENRLY---------SGTCMLDIFQRLNIMIDVALALE 837
I + +++E M G L++ L S MLD+ L++ D+A +
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 195
Query: 838 YLHFGHSTPIIHY---------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGY 882
YL H IH VA I DF +A+ + + + +
Sbjct: 196 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKW 252
Query: 883 MAPEYGVQGRVSTRGDVYSYGIMLMETFT 911
M PE ++G +++ D +S+G++L E F+
Sbjct: 253 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 162/404 (40%), Gaps = 115/404 (28%)
Query: 199 NNLSGAIPKEIGNLTKLKDIILNDNELRGEIPQEMGNLPYLVRLTLATNNLVGVVPFTIF 258
N L+ P + NLTKL DI++N+N++ P + NL L LTL N + + P
Sbjct: 73 NQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDPLK-- 126
Query: 259 NMSTLKKLSLLENTLWGSLPSRIDLSLPNVEFLNLGTNRFSGNIPSSITNASKLTVFQ-- 316
N++ L +L L NT+ S I+ S LT Q
Sbjct: 127 NLTNLNRLELSSNTI------------------------------SDISALSGLTSLQQL 156
Query: 317 -LRGNSFSGFIPNTIGNLRNLEFLNIADNYLTSSTPELSFLSSLTNCQKIRVLILAGNPL 375
N + P + NL LE L+I+ N ++ ++S L+ LTN + LI N +
Sbjct: 157 NFSSNQVTDLKP--LANLTTLERLDISSNKVS----DISVLAKLTNLES---LIATNNQI 207
Query: 376 DGILPSSI-GNLS-ISLERFQMFNCRISGKIPQVISXXXXXXXXXXXXXXXXXSIPVTFS 433
I P I NL +SL Q+ + T +
Sbjct: 208 SDITPLGILTNLDELSLNGNQLKDIG-------------------------------TLA 236
Query: 434 RLLNLQGLGLAFNKLARSIPDEICHLAKLDKLILHGNKFSGAIPSCSGNLTSLRALYLGS 493
L NL L LA N+++ P + L KL +L L N+ S P LT+L L L
Sbjct: 237 SLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAG--LTALTNLELNE 292
Query: 494 NRFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRNNLSGDIPITIG 553
N+ L+DI P+S NLK + L L NN+S P++
Sbjct: 293 NQ-----------LEDI-----------SPIS----NLKNLTYLTLYFNNISDISPVS-- 324
Query: 554 GLKNLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNKISGVIP 597
L LQ+LF NN++ S + L+++ L N+IS + P
Sbjct: 325 SLTKLQRLFFYNNKVSD--VSSLANLTNINWLSAGHNQISDLTP 366
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 34/159 (21%)
Query: 437 NLQGLGLAFNKLARSIPDEICHLAKLDKLILHGNKFSGAIPSCSGNLTSLRALYLGSNRF 496
NL + + N+L P + +L KL ++++ N+ + P NLT+L L L +N+
Sbjct: 64 NLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPLA--NLTNLTGLTLFNNQI 119
Query: 497 TSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRNNLSGDIPITIGGLK 556
T P + NL ++ ++SSN++ DI L GL
Sbjct: 120 TDIDP--LKNLTNLNRLELSSNTIS-----DISAL---------------------SGLT 151
Query: 557 NLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNKISGV 595
+LQ+L ++N++ P + L++LE LD+S NK+S +
Sbjct: 152 SLQQLNFSSNQVTDLKP--LANLTTLERLDISSNKVSDI 188
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 121/277 (43%), Gaps = 73/277 (26%)
Query: 88 LGNLSSLETLDLSHNKLSG-NIPSSIFNMHT-------------------LKLLDFRDNQ 127
L NL++LE LD+S NK+S ++ + + N+ + L L NQ
Sbjct: 169 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQ 228
Query: 128 L--FGSLSSFIFNMSSMLGIDLSINRFSGELPANICXXXXXXXXXXXGRNMFHGKIPSTL 185
L G+L+S ++++ +DL+ N+ S P L
Sbjct: 229 LKDIGTLAS----LTNLTDLDLANNQISNLAP---------------------------L 257
Query: 186 SKCKQLEGLYLRFNNLSGAIPKEIGNLTKLKDIILNDNELRGEIPQEMGNLPYLVRLTLA 245
S +L L L N +S P + LT L ++ LN+N+L P + NL L LTL
Sbjct: 258 SGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLY 313
Query: 246 TNNLVGVVPFTIFNMSTLKKLSLLENTLWGSLPSRIDLSLPNVEFLNLGTNRFSGNIPSS 305
NN+ + P + +++ L++L N + + S +L+ N+ +L+ G N+ S P
Sbjct: 314 FNNISDISP--VSSLTKLQRLFFYNNKV-SDVSSLANLT--NINWLSAGHNQISDLTP-- 366
Query: 306 ITNASKLTVFQLRGNSFSGF---------IPNTIGNL 333
+ N +++T L +++ IPNT+ N+
Sbjct: 367 LANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNV 403
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 93/214 (43%), Gaps = 47/214 (21%)
Query: 734 LGIGSFGSVYVARLQ------DGMEVAVKVFHQRYERALKSFQDECE------VMKRIRH 781
LG G+FG VY ++ ++VAVK + + S QDE + ++ + H
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-----VCSEQDELDFLMEALIISKFNH 110
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLY---------SGTCMLDIFQRLNIMIDV 832
+N+V+ I + +++E M G L++ L S MLD+ L++ D+
Sbjct: 111 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDI 167
Query: 833 ALALEYLHFGHSTPIIHY---------------MVAHISDFSIAKFLNGQDQLSMQTQTL 877
A +YL H IH VA I DF +A+ + +
Sbjct: 168 ACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAM 224
Query: 878 ATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT 911
+ +M PE ++G +++ D +S+G++L E F+
Sbjct: 225 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 23/205 (11%)
Query: 731 NNLLGIGSFGSVYVARLQDG----MEVAVKVFHQRYE-RALKSFQDECEVMKRIRHRNLV 785
N ++G G FG VY L D + AVK ++ + + F E +MK H N++
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 786 KIISACSNDDFKALI-MEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHS 844
++ C + L+ + YM +G L N + + T + + + VA ++YL S
Sbjct: 92 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---S 148
Query: 845 TPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLAT--IGYMAPEYGVQ 890
+H +A ++DF +A+ + ++ S+ +T A + +MA E
Sbjct: 149 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 208
Query: 891 GRVSTRGDVYSYGIMLMETFTGKKP 915
+ +T+ DV+S+G++L E T P
Sbjct: 209 QKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 162/404 (40%), Gaps = 115/404 (28%)
Query: 199 NNLSGAIPKEIGNLTKLKDIILNDNELRGEIPQEMGNLPYLVRLTLATNNLVGVVPFTIF 258
N L+ P + NLTKL DI++N+N++ P + NL L LTL N + + P
Sbjct: 73 NQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDPLK-- 126
Query: 259 NMSTLKKLSLLENTLWGSLPSRIDLSLPNVEFLNLGTNRFSGNIPSSITNASKLTVFQ-- 316
N++ L +L L NT+ S I+ S LT Q
Sbjct: 127 NLTNLNRLELSSNTI------------------------------SDISALSGLTSLQQL 156
Query: 317 -LRGNSFSGFIPNTIGNLRNLEFLNIADNYLTSSTPELSFLSSLTNCQKIRVLILAGNPL 375
N + P + NL LE L+I+ N ++ ++S L+ LTN + LI N +
Sbjct: 157 SFSSNQVTDLKP--LANLTTLERLDISSNKVS----DISVLAKLTNLES---LIATNNQI 207
Query: 376 DGILPSSI-GNLS-ISLERFQMFNCRISGKIPQVISXXXXXXXXXXXXXXXXXSIPVTFS 433
I P I NL +SL Q+ + T +
Sbjct: 208 SDITPLGILTNLDELSLNGNQLKDIG-------------------------------TLA 236
Query: 434 RLLNLQGLGLAFNKLARSIPDEICHLAKLDKLILHGNKFSGAIPSCSGNLTSLRALYLGS 493
L NL L LA N+++ P + L KL +L L N+ S P LT+L L L
Sbjct: 237 SLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAG--LTALTNLELNE 292
Query: 494 NRFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRNNLSGDIPITIG 553
N+ L+DI P+S NLK + L L NN+S P++
Sbjct: 293 NQ-----------LEDI-----------SPIS----NLKNLTYLTLYFNNISDISPVS-- 324
Query: 554 GLKNLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNKISGVIP 597
L LQ+LF NN++ S + L+++ L N+IS + P
Sbjct: 325 SLTKLQRLFFYNNKVSD--VSSLANLTNINWLSAGHNQISDLTP 366
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 34/159 (21%)
Query: 437 NLQGLGLAFNKLARSIPDEICHLAKLDKLILHGNKFSGAIPSCSGNLTSLRALYLGSNRF 496
NL + + N+L P + +L KL ++++ N+ + P NLT+L L L +N+
Sbjct: 64 NLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPLA--NLTNLTGLTLFNNQI 119
Query: 497 TSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRNNLSGDIPITIGGLK 556
T P + NL ++ ++SSN++ DI L GL
Sbjct: 120 TDIDP--LKNLTNLNRLELSSNTIS-----DISAL---------------------SGLT 151
Query: 557 NLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNKISGV 595
+LQ+L ++N++ P + L++LE LD+S NK+S +
Sbjct: 152 SLQQLSFSSNQVTDLKP--LANLTTLERLDISSNKVSDI 188
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 121/277 (43%), Gaps = 73/277 (26%)
Query: 88 LGNLSSLETLDLSHNKLSG-NIPSSIFNMHT-------------------LKLLDFRDNQ 127
L NL++LE LD+S NK+S ++ + + N+ + L L NQ
Sbjct: 169 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQ 228
Query: 128 L--FGSLSSFIFNMSSMLGIDLSINRFSGELPANICXXXXXXXXXXXGRNMFHGKIPSTL 185
L G+L+S ++++ +DL+ N+ S P L
Sbjct: 229 LKDIGTLAS----LTNLTDLDLANNQISNLAP---------------------------L 257
Query: 186 SKCKQLEGLYLRFNNLSGAIPKEIGNLTKLKDIILNDNELRGEIPQEMGNLPYLVRLTLA 245
S +L L L N +S P + LT L ++ LN+N+L P + NL L LTL
Sbjct: 258 SGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLY 313
Query: 246 TNNLVGVVPFTIFNMSTLKKLSLLENTLWGSLPSRIDLSLPNVEFLNLGTNRFSGNIPSS 305
NN+ + P + +++ L++L N + + S +L+ N+ +L+ G N+ S P
Sbjct: 314 FNNISDISP--VSSLTKLQRLFFYNNKV-SDVSSLANLT--NINWLSAGHNQISDLTP-- 366
Query: 306 ITNASKLTVFQLRGNSFSGF---------IPNTIGNL 333
+ N +++T L +++ IPNT+ N+
Sbjct: 367 LANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNV 403
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 23/205 (11%)
Query: 731 NNLLGIGSFGSVYVARLQDG----MEVAVKVFHQRYE-RALKSFQDECEVMKRIRHRNLV 785
N ++G G FG VY L D + AVK ++ + + F E +MK H N++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 786 KIISACSNDDFKALI-MEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHS 844
++ C + L+ + YM +G L N + + T + + + VA ++YL S
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---S 150
Query: 845 TPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLAT--IGYMAPEYGVQ 890
+H +A ++DF +A+ + ++ S+ +T A + +MA E
Sbjct: 151 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 210
Query: 891 GRVSTRGDVYSYGIMLMETFTGKKP 915
+ +T+ DV+S+G++L E T P
Sbjct: 211 QKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 23/205 (11%)
Query: 731 NNLLGIGSFGSVYVARLQDG----MEVAVKVFHQRYE-RALKSFQDECEVMKRIRHRNLV 785
N ++G G FG VY L D + AVK ++ + + F E +MK H N++
Sbjct: 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 786 KIISACSNDDFKALI-MEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHS 844
++ C + L+ + YM +G L N + + T + + + VA ++YL S
Sbjct: 90 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---S 146
Query: 845 TPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLAT--IGYMAPEYGVQ 890
+H +A ++DF +A+ + ++ S+ +T A + +MA E
Sbjct: 147 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 206
Query: 891 GRVSTRGDVYSYGIMLMETFTGKKP 915
+ +T+ DV+S+G++L E T P
Sbjct: 207 QKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 91/209 (43%), Gaps = 37/209 (17%)
Query: 734 LGIGSFGSVYVARLQ------DGMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVK 786
LG G+FG VY ++ ++VAVK + E+ F E ++ + H+N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 787 IISACSNDDFKALIMEYMPNGSLENRLY---------SGTCMLDIFQRLNIMIDVALALE 837
I + +++E M G L++ L S MLD+ L++ D+A +
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 155
Query: 838 YLHFGHSTPIIHY---------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGY 882
YL H IH VA I DF +A+ + + + +
Sbjct: 156 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKW 212
Query: 883 MAPEYGVQGRVSTRGDVYSYGIMLMETFT 911
M PE ++G +++ D +S+G++L E F+
Sbjct: 213 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 23/205 (11%)
Query: 731 NNLLGIGSFGSVYVARLQDG----MEVAVKVFHQRYE-RALKSFQDECEVMKRIRHRNLV 785
N ++G G FG VY L D + AVK ++ + + F E +MK H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 786 KIISACSNDDFKALI-MEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHS 844
++ C + L+ + YM +G L N + + T + + + VA ++YL S
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---S 151
Query: 845 TPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLAT--IGYMAPEYGVQ 890
+H +A ++DF +A+ + ++ S+ +T A + +MA E
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 211
Query: 891 GRVSTRGDVYSYGIMLMETFTGKKP 915
+ +T+ DV+S+G++L E T P
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 74/272 (27%), Positives = 117/272 (43%), Gaps = 55/272 (20%)
Query: 688 LKWKLIRCWKSITGSSNDGINSPQAIRRFSYHELLQATDRFSKNNL-----LGIGSFGSV 742
++WK+I +S G+S I+ Q Y+E + F +NNL LG G+FG V
Sbjct: 14 VRWKII---ESYEGNSYTFIDPTQ----LPYNEKWE----FPRNNLQFGKTLGAGAFGKV 62
Query: 743 YVARL-----QDG-MEVAVKVF----HQRYERALKSFQDECEVMKRI-RHRNLVKIISAC 791
A +D ++VAVK+ H + AL S E ++M + +H N+V ++ AC
Sbjct: 63 VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS---ELKIMSHLGQHENIVNLLGAC 119
Query: 792 SNDDFKALIMEYMPNGSLENRLYSGTCM---------LDIFQRLNIMIDVALALEYLHFG 842
++ +I EY G L N L L++ L+ VA + +L
Sbjct: 120 THGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL--- 176
Query: 843 HSTPIIHY------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQ 890
S IH VA I DF +A+ + ++ + +MAPE
Sbjct: 177 ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFD 236
Query: 891 GRVSTRGDVYSYGIMLMETFT-GKKPTDEIFI 921
+ + DV+SYGI+L E F+ G P I +
Sbjct: 237 CVYTVQSDVWSYGILLWEIFSLGLNPYPGILV 268
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 57.0 bits (136), Expect = 6e-08, Method: Composition-based stats.
Identities = 56/195 (28%), Positives = 91/195 (46%), Gaps = 18/195 (9%)
Query: 734 LGIGSFGSVYVAR-LQDGMEVAVKV-FHQRYERALKSFQ--DECEVMKRIRHRNLVKIIS 789
LG G FG+VY+AR Q +A+KV F + E+A Q E E+ +RH N++++
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 790 ACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIH 849
+ LI+EY P G++ L D + + ++A AL Y HS +IH
Sbjct: 80 YFHDATRVYLILEYAPLGTVYREL-QKLSRFDEQRTATYITELANALSYC---HSKRVIH 135
Query: 850 -------YMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQGRV-STRGDVY 900
++ + IA F S + TL T+ Y+ PE ++GR+ + D++
Sbjct: 136 RDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEM-IEGRMHDEKVDLW 194
Query: 901 SYGIMLMETFTGKKP 915
S G++ E G P
Sbjct: 195 SLGVLCYEFLVGMPP 209
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 93/214 (43%), Gaps = 47/214 (21%)
Query: 734 LGIGSFGSVYVARLQ------DGMEVAVKVFHQRYERALKSFQDECE------VMKRIRH 781
LG G+FG VY ++ ++VAVK + + S QDE + ++ + H
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-----VCSEQDELDFLMEALIISKFNH 119
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLY---------SGTCMLDIFQRLNIMIDV 832
+N+V+ I + +++E M G L++ L S MLD+ L++ D+
Sbjct: 120 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDI 176
Query: 833 ALALEYLHFGHSTPIIHY---------------MVAHISDFSIAKFLNGQDQLSMQTQTL 877
A +YL H IH VA I DF +A+ + +
Sbjct: 177 ACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 233
Query: 878 ATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT 911
+ +M PE ++G +++ D +S+G++L E F+
Sbjct: 234 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 57.0 bits (136), Expect = 6e-08, Method: Composition-based stats.
Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 18/195 (9%)
Query: 734 LGIGSFGSVYVAR-LQDGMEVAVKV-FHQRYERALKSFQ--DECEVMKRIRHRNLVKIIS 789
LG G FG+VY+AR Q +A+KV F + E+A Q E E+ +RH N++++
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 790 ACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIH 849
+ LI+EY P G++ L D + + ++A AL Y HS +IH
Sbjct: 80 YFHDATRVYLILEYAPLGTVYREL-QKLSRFDEQRTATYITELANALSYC---HSKRVIH 135
Query: 850 -------YMVAHISDFSIAKF-LNGQDQLSMQTQTLATIGYMAPEYGVQGRV-STRGDVY 900
++ + IA F + S +T T+ Y+ PE ++GR+ + D++
Sbjct: 136 RDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM-IEGRMHDEKVDLW 194
Query: 901 SYGIMLMETFTGKKP 915
S G++ E G P
Sbjct: 195 SLGVLCYEFLVGMPP 209
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 25/205 (12%)
Query: 732 NLLGIGSFGSVYVARL--QDG--MEVAVKVFH--QRYERALKSFQDECEVMKRIRHRNLV 785
+LG G FGSV L +DG ++VAVK +R ++ F E MK H N++
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 786 KIISACSNDDFKAL-----IMEYMPNGSLE-----NRLYSGTCMLDIFQRLNIMIDVALA 835
+++ C + + I+ +M G L +RL +G + + L M+D+AL
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 836 LEYL---HFGH------STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPE 886
+EYL +F H + + M ++DF ++K + D + ++A E
Sbjct: 160 MEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIE 219
Query: 887 YGVQGRVSTRGDVYSYGIMLMETFT 911
+++ DV+++G+ + E T
Sbjct: 220 SLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 93/210 (44%), Gaps = 25/210 (11%)
Query: 729 SKNNLLGIGSFGSVY-VARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKI 787
SK +LG G FG V+ G+++A K+ R + + ++E VM ++ H NL+++
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 788 ISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPI 847
A + + L+MEY+ G L +R+ + L + M + + ++ H I
Sbjct: 152 YDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHM---HQMYI 208
Query: 848 IHYMVA--------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRV 893
+H + I DF +A+ +++L + T ++APE V
Sbjct: 209 LHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKV---NFGTPEFLAPEVVNYDFV 265
Query: 894 STRGDVYSYGIMLMETFTGKKPTDEIFIGE 923
S D++S G++ +G P F+G+
Sbjct: 266 SFPTDMWSVGVIAYMLLSGLSP----FLGD 291
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 99/219 (45%), Gaps = 27/219 (12%)
Query: 727 RFSKNNLLGIGSFGSVYVA-RLQDG----MEVAVKVFHQRYERALKSFQ---DECEVMKR 778
K +LG G FG+V+ + +G + V +KV + R +SFQ D +
Sbjct: 32 ELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGR--QSFQAVTDHMLAIGS 89
Query: 779 IRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEY 838
+ H ++V+++ C + L+ +Y+P GSL + + L LN + +A + Y
Sbjct: 90 LDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYY 148
Query: 839 LHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPE 886
L ++H +A ++DF +A L D+ + ++ I +MA E
Sbjct: 149 LE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALE 205
Query: 887 YGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGEL 924
G+ + + DV+SYG+ + E T G +P + + E+
Sbjct: 206 SIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEV 244
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 31/203 (15%)
Query: 734 LGIGSFGSVYVARLQDGME------VAVKVFHQRYE-RALKSFQDECEVMKRIRHRNLVK 786
LG GSFG VY +D ++ VAVK ++ R F +E VMK ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 787 IISACSNDDFKALIMEYMPNGSLENRLYS---------GTCMLDIFQRLNIMIDVALALE 837
++ S ++ME M +G L++ L S G + + + + ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 838 YLHFGHSTPIIHY-------MVAH-----ISDFSIAKFLNGQDQLSMQTQTLATIGYMAP 885
YL+ + +H MVAH I DF + + + D + L + +MAP
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 886 EYGVQGRVSTRGDVYSYGIMLME 908
E G +T D++S+G++L E
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWE 224
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 31/203 (15%)
Query: 734 LGIGSFGSVYVARLQDGME------VAVKVFHQRYE-RALKSFQDECEVMKRIRHRNLVK 786
LG GSFG VY +D ++ VAVK ++ R F +E VMK ++V+
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 787 IISACSNDDFKALIMEYMPNGSLENRLYS---------GTCMLDIFQRLNIMIDVALALE 837
++ S ++ME M +G L++ L S G + + + + ++A +
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 838 YLHFGHSTPIIHY-------MVAH-----ISDFSIAKFLNGQDQLSMQTQTLATIGYMAP 885
YL+ + +H MVAH I DF + + + D + L + +MAP
Sbjct: 142 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 198
Query: 886 EYGVQGRVSTRGDVYSYGIMLME 908
E G +T D++S+G++L E
Sbjct: 199 ESLKDGVFTTSSDMWSFGVVLWE 221
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 31/203 (15%)
Query: 734 LGIGSFGSVYVARLQDGME------VAVKVFHQRYE-RALKSFQDECEVMKRIRHRNLVK 786
LG GSFG VY +D ++ VAVK ++ R F +E VMK ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 787 IISACSNDDFKALIMEYMPNGSLENRLYS---------GTCMLDIFQRLNIMIDVALALE 837
++ S ++ME M +G L++ L S G + + + + ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 838 YLHFGHSTPIIHY-------MVAH-----ISDFSIAKFLNGQDQLSMQTQTLATIGYMAP 885
YL+ + +H MVAH I DF + + + D + L + +MAP
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 886 EYGVQGRVSTRGDVYSYGIMLME 908
E G +T D++S+G++L E
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWE 224
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 56.2 bits (134), Expect = 8e-08, Method: Composition-based stats.
Identities = 66/261 (25%), Positives = 115/261 (44%), Gaps = 25/261 (9%)
Query: 706 GINSPQAIRRFSYHELLQATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRYE- 763
GI S +A + + +L+ T+ F K +LG G+FG+VY + +G +V + V +
Sbjct: 4 GIRSGEAPNQ-ALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE 61
Query: 764 ----RALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCM 819
+A K DE VM + + ++ +++ C + LI + MP G L + +
Sbjct: 62 ATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDN 120
Query: 820 LDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQ 867
+ LN + +A + YL ++H +A I+DF AK L +
Sbjct: 121 IGSQYLLNWCVQIAKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAE 177
Query: 868 DQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSL 926
++ I +MA E + + + DV+SYG+ + E T G KP D I E+S
Sbjct: 178 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 237
Query: 927 SRWVNDLLPISVMEVIDTNLL 947
+ LP + ID ++
Sbjct: 238 ILEKGERLPQPPICTIDVYMI 258
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 113/261 (43%), Gaps = 54/261 (20%)
Query: 688 LKWKLIRCWKSITGSSNDGINSPQAIRRFSYHELLQATDRFSKNNL-----LGIGSFGSV 742
++WK+I +S G+S I+ Q Y+E + F +NNL LG G+FG V
Sbjct: 6 VRWKII---ESYEGNSYTFIDPTQ----LPYNEKWE----FPRNNLQFGKTLGAGAFGKV 54
Query: 743 YVARL-----QDG-MEVAVKVF----HQRYERALKSFQDECEVMKRI-RHRNLVKIISAC 791
A +D ++VAVK+ H + AL S E ++M + +H N+V ++ AC
Sbjct: 55 VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS---ELKIMSHLGQHENIVNLLGAC 111
Query: 792 SNDDFKALIMEYMPNGSLENRLYSGTCM---------LDIFQRLNIMIDVALALEYLHFG 842
++ +I EY G L N L L++ L+ VA + +L
Sbjct: 112 THGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL--- 168
Query: 843 HSTPIIHY------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQ 890
S IH VA I DF +A+ + ++ + +MAPE
Sbjct: 169 ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFD 228
Query: 891 GRVSTRGDVYSYGIMLMETFT 911
+ + DV+SYGI+L E F+
Sbjct: 229 CVYTVQSDVWSYGILLWEIFS 249
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 88/196 (44%), Gaps = 30/196 (15%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN 793
LG G FG V++A +VAVK ++++F E VMK ++H LVK+ + +
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 248
Query: 794 DDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALAL-EYLHFGHSTPIIHY-- 850
+ +I E+M GSL + L S Q L +ID + + E + F IH
Sbjct: 249 EPI-YIITEFMAKGSLLDFLKSDEGSK---QPLPKLIDFSAQIAEGMAFIEQRNYIHRDL 304
Query: 851 ----------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVY 900
+V I+DF +A+ I + APE G + + DV+
Sbjct: 305 RAANILVSASLVCKIADFGLAR-----------VGAKFPIKWTAPEAINFGSFTIKSDVW 353
Query: 901 SYGIMLMETFT-GKKP 915
S+GI+LME T G+ P
Sbjct: 354 SFGILLMEIVTYGRIP 369
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 62/246 (25%), Positives = 108/246 (43%), Gaps = 24/246 (9%)
Query: 721 LLQATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRYE-----RALKSFQDECE 774
+L+ T+ F K +LG G+FG+VY + +G +V + V + +A K DE
Sbjct: 13 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 775 VMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVAL 834
VM + + ++ +++ C + LI + MP G L + + + LN + +A
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 835 ALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGY 882
+ YL ++H +A I+DF AK L +++ I +
Sbjct: 131 GMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 187
Query: 883 MAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEV 941
MA E + + + DV+SYG+ + E T G KP D I E+S + LP +
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 247
Query: 942 IDTNLL 947
ID ++
Sbjct: 248 IDVYMI 253
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 62/246 (25%), Positives = 108/246 (43%), Gaps = 24/246 (9%)
Query: 721 LLQATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRYE-----RALKSFQDECE 774
+L+ T+ F K +LG G+FG+VY + +G +V + V + +A K DE
Sbjct: 11 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 775 VMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVAL 834
VM + + ++ +++ C + LI + MP G L + + + LN + +A
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 835 ALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGY 882
+ YL ++H +A I+DF AK L +++ I +
Sbjct: 129 GMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 185
Query: 883 MAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEV 941
MA E + + + DV+SYG+ + E T G KP D I E+S + LP +
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 245
Query: 942 IDTNLL 947
ID ++
Sbjct: 246 IDVYMI 251
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 25/200 (12%)
Query: 734 LGIGSFGSVYVARLQDGME------VAVKVFHQRYE-RALKSFQDECEVMKRIRHRNLVK 786
LG GSFG VY +D ++ VAVK ++ R F +E VMK ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 787 IISACSNDDFKALIMEYMPNGSLENRLYS---------GTCMLDIFQRLNIMIDVALALE 837
++ S ++ME M +G L++ L S G + + + + ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 838 YLH---FGH-STPIIHYMVAH-----ISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYG 888
YL+ F H + + MVAH I DF + + + D + L + +MAPE
Sbjct: 145 YLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESL 204
Query: 889 VQGRVSTRGDVYSYGIMLME 908
G +T D++S+G++L E
Sbjct: 205 KDGVFTTSSDMWSFGVVLWE 224
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 25/200 (12%)
Query: 734 LGIGSFGSVYVARLQDGME------VAVKVFHQRYE-RALKSFQDECEVMKRIRHRNLVK 786
LG GSFG VY +D ++ VAVK ++ R F +E VMK ++V+
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 787 IISACSNDDFKALIMEYMPNGSLENRLYS---------GTCMLDIFQRLNIMIDVALALE 837
++ S ++ME M +G L++ L S G + + + + ++A +
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 838 YLH---FGH-STPIIHYMVAH-----ISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYG 888
YL+ F H + + MVAH I DF + + + D + L + +MAPE
Sbjct: 146 YLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESL 205
Query: 889 VQGRVSTRGDVYSYGIMLME 908
G +T D++S+G++L E
Sbjct: 206 KDGVFTTSSDMWSFGVVLWE 225
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 65/261 (24%), Positives = 115/261 (44%), Gaps = 25/261 (9%)
Query: 706 GINSPQAIRRFSYHELLQATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRYE- 763
GI S +A + + +L+ T+ F K +L G+FG+VY + +G +V + V +
Sbjct: 4 GIRSGEAPNQ-ALLRILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELRE 61
Query: 764 ----RALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCM 819
+A K DE VM + + ++ +++ C + LI + MP G L + +
Sbjct: 62 ATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDN 120
Query: 820 LDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQ 867
+ LN + +A + YL ++H +A I+DF +AK L +
Sbjct: 121 IGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 177
Query: 868 DQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSL 926
++ I +MA E + + + DV+SYG+ + E T G KP D I E+S
Sbjct: 178 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 237
Query: 927 SRWVNDLLPISVMEVIDTNLL 947
+ LP + ID ++
Sbjct: 238 ILEKGERLPQPPICTIDVYMI 258
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 31/203 (15%)
Query: 734 LGIGSFGSVYVARLQDGME------VAVKVFHQRYE-RALKSFQDECEVMKRIRHRNLVK 786
LG GSFG VY +D ++ VAVK ++ R F +E VMK ++V+
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 787 IISACSNDDFKALIMEYMPNGSLENRLYS---------GTCMLDIFQRLNIMIDVALALE 837
++ S ++ME M +G L++ L S G + + + + ++A +
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 838 YLHFGHSTPIIHY-------MVAH-----ISDFSIAKFLNGQDQLSMQTQTLATIGYMAP 885
YL+ + +H MVAH I DF + + + D + L + +MAP
Sbjct: 144 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 200
Query: 886 EYGVQGRVSTRGDVYSYGIMLME 908
E G +T D++S+G++L E
Sbjct: 201 ESLKDGVFTTSSDMWSFGVVLWE 223
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 31/203 (15%)
Query: 734 LGIGSFGSVYVARLQDGME------VAVKVFHQRYE-RALKSFQDECEVMKRIRHRNLVK 786
LG GSFG VY +D ++ VAVK ++ R F +E VMK ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 787 IISACSNDDFKALIMEYMPNGSLENRLYS---------GTCMLDIFQRLNIMIDVALALE 837
++ S ++ME M +G L++ L S G + + + + ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 838 YLHFGHSTPIIHY-------MVAH-----ISDFSIAKFLNGQDQLSMQTQTLATIGYMAP 885
YL+ + +H MVAH I DF + + + D + L + +MAP
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 886 EYGVQGRVSTRGDVYSYGIMLME 908
E G +T D++S+G++L E
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWE 224
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 66/121 (54%), Gaps = 6/121 (4%)
Query: 205 IPKEIGNLTKLKDIILNDNELRGEIPQE--MGNLPYLVRLTLATNNLVGVVPFTIFNMST 262
IP++I T +++LNDNEL G I + G LP+LV+L L N L G+ P S
Sbjct: 23 IPRDIPLHTT--ELLLNDNEL-GRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASH 79
Query: 263 LKKLSLLENTLWGSLPSRIDLSLPNVEFLNLGTNRFSGNIPSSITNASKLTVFQLRGNSF 322
+++L L EN + + +++ L L ++ LNL N+ S +P S + + LT L N F
Sbjct: 80 IQELQLGENKI-KEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPF 138
Query: 323 S 323
+
Sbjct: 139 N 139
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%)
Query: 528 IGNLKVVIELNLSRNNLSGDIPITIGGLKNLQKLFLANNRLEGPIPESFSGLSSLEILDL 587
G L +++L L RN L+G P G ++Q+L L N+++ + F GL L+ L+L
Sbjct: 50 FGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109
Query: 588 SKNKISGVIP 597
N+IS V+P
Sbjct: 110 YDNQISCVMP 119
Score = 33.1 bits (74), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Query: 285 LPNVEFLNLGTNRFSGNIPSSITNASKLTVFQLRGNSFSGFIPNTIGNLRNLEFLNIADN 344
LP++ L L N+ +G P++ AS + QL N L L+ LN+ DN
Sbjct: 53 LPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDN 112
Query: 345 YLTSSTP-ELSFLSSLTNCQKIRVLILAGNPLD 376
++ P L+SLT+ L LA NP +
Sbjct: 113 QISCVMPGSFEHLNSLTS------LNLASNPFN 139
Score = 30.8 bits (68), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 38/84 (45%)
Query: 70 VIVLNISGFNLQGTIPPQLGNLSSLETLDLSHNKLSGNIPSSIFNMHTLKLLDFRDNQLF 129
++ L + L G P S ++ L L NK+ +H LK L+ DNQ+
Sbjct: 56 LVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQIS 115
Query: 130 GSLSSFIFNMSSMLGIDLSINRFS 153
+ +++S+ ++L+ N F+
Sbjct: 116 CVMPGSFEHLNSLTSLNLASNPFN 139
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 69/286 (24%), Positives = 121/286 (42%), Gaps = 36/286 (12%)
Query: 722 LQATDRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERAL--KSFQDECEVMKR 778
Q+ +++ L+G GS+G V R +D G VA+K F + + + K E +++K+
Sbjct: 21 FQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQ 80
Query: 779 IRHRNLVKIISACSNDDFKALIMEYMPNGSLEN-RLYSGTCMLDIFQRLNIMIDVALALE 837
+RH NLV ++ C L+ E++ + L++ L+ + Q+ I +
Sbjct: 81 LRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQI-----IN 135
Query: 838 YLHFGHSTPIIH------------YMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAP 885
+ F HS IIH V + DF A+ L ++ +AT Y AP
Sbjct: 136 GIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEV--YDDEVATRWYRAP 193
Query: 886 EYGVQG-RVSTRGDVYSYGIMLMETFTGKK--PTDEIFIGELSLSRWVNDLLPISVMEVI 942
E V + DV++ G ++ E F G+ P D + + +L+P E+
Sbjct: 194 ELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRH-QELF 252
Query: 943 DTNLLSGEERYFAAKEQSLLS---------ILNLATECTIESPGKR 979
+ N + R KE+ L +++LA +C P KR
Sbjct: 253 NKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKR 298
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 61/246 (24%), Positives = 108/246 (43%), Gaps = 24/246 (9%)
Query: 721 LLQATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRYE-----RALKSFQDECE 774
+L+ T+ F K +L G+FG+VY + +G +V + V + +A K DE
Sbjct: 11 ILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 775 VMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVAL 834
VM + + ++ +++ C + LI + MP G L + + + LN + +A
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 835 ALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGY 882
+ YL ++H +A I+DF +AK L +++ I +
Sbjct: 129 GMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 883 MAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEV 941
MA E + + + DV+SYG+ + E T G KP D I E+S + LP +
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 245
Query: 942 IDTNLL 947
ID ++
Sbjct: 246 IDVYMI 251
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 56/199 (28%), Positives = 88/199 (44%), Gaps = 26/199 (13%)
Query: 734 LGIGSFGSVYV-----ARLQDGMEVAVKVFHQRYERALKS-FQDECEVMKRIRHRNLVKI 787
LG G FG V + G VAVK + L+S +Q E E+++ + H ++VK
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 788 ISACSNDDFKA--LIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHST 845
C + K+ L+MEY+P GSL R Y + + Q L + + YLH H
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSL--RDYLPRHCVGLAQLLLFAQQICEGMAYLHAQH-- 131
Query: 846 PIIHYMVA------------HISDFSIAKFL-NGQDQLSMQTQTLATIGYMAPEYGVQGR 892
IH +A I DF +AK + G + ++ + + + APE + +
Sbjct: 132 -YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECK 190
Query: 893 VSTRGDVYSYGIMLMETFT 911
DV+S+G+ L E T
Sbjct: 191 FYYASDVWSFGVTLYELLT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 56/199 (28%), Positives = 88/199 (44%), Gaps = 26/199 (13%)
Query: 734 LGIGSFGSVYV-----ARLQDGMEVAVKVFHQRYERALKS-FQDECEVMKRIRHRNLVKI 787
LG G FG V + G VAVK + L+S +Q E E+++ + H ++VK
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 788 ISACSNDDFKA--LIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHST 845
C + K+ L+MEY+P GSL R Y + + Q L + + YLH H
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSL--RDYLPRHCVGLAQLLLFAQQICEGMAYLHAQH-- 132
Query: 846 PIIHYMVA------------HISDFSIAKFL-NGQDQLSMQTQTLATIGYMAPEYGVQGR 892
IH +A I DF +AK + G + ++ + + + APE + +
Sbjct: 133 -YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECK 191
Query: 893 VSTRGDVYSYGIMLMETFT 911
DV+S+G+ L E T
Sbjct: 192 FYYASDVWSFGVTLYELLT 210
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 26/203 (12%)
Query: 733 LLGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKS----FQDECEVMKRIRHRNLVKII 788
++G G+FG V + R + +V ++E +S F +E ++M +V++
Sbjct: 76 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 135
Query: 789 SACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPII 848
A +D + ++MEYMP G L N L S + + + R +V LAL+ + HS I
Sbjct: 136 YAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARF-YTAEVVLALDAI---HSMGFI 190
Query: 849 HYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPE----YGVQGR 892
H V ++DF +N + + T + T Y++PE G G
Sbjct: 191 HRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVGTPDYISPEVLKSQGGDGY 249
Query: 893 VSTRGDVYSYGIMLMETFTGKKP 915
D +S G+ L E G P
Sbjct: 250 YGRECDWWSVGVFLYEMLVGDTP 272
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 26/203 (12%)
Query: 733 LLGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKS----FQDECEVMKRIRHRNLVKII 788
++G G+FG V + R + +V ++E +S F +E ++M +V++
Sbjct: 81 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 140
Query: 789 SACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPII 848
A +D + ++MEYMP G L N L S + + + R +V LAL+ + HS I
Sbjct: 141 YAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARF-YTAEVVLALDAI---HSMGFI 195
Query: 849 HYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPE----YGVQGR 892
H V ++DF +N + + T + T Y++PE G G
Sbjct: 196 HRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVGTPDYISPEVLKSQGGDGY 254
Query: 893 VSTRGDVYSYGIMLMETFTGKKP 915
D +S G+ L E G P
Sbjct: 255 YGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 52/210 (24%), Positives = 86/210 (40%), Gaps = 27/210 (12%)
Query: 726 DRFSKNNLLGIGSFGSVY-VARLQDGMEVAVKVFHQ-RYERALKSFQDECEVMKRIRHRN 783
D F LG G+FG V+ V G+E +K ++ R + ++ + E EV+K + H N
Sbjct: 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPN 81
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQR---LNIMIDVALALEYLH 840
++KI + ++ME G L R+ S +M + AL Y H
Sbjct: 82 IIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH 141
Query: 841 FGHSTPIIH---------------YMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAP 885
H ++H + I DF +A+ + T T YMAP
Sbjct: 142 SQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH---STNAAGTALYMAP 195
Query: 886 EYGVQGRVSTRGDVYSYGIMLMETFTGKKP 915
E + V+ + D++S G+++ TG P
Sbjct: 196 EV-FKRDVTFKCDIWSAGVVMYFLLTGCLP 224
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 91/217 (41%), Gaps = 26/217 (11%)
Query: 719 HELLQATDRFSKNNLLGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKS----FQDECE 774
+L + + ++G G+FG V + R + +V ++E +S F +E +
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 126
Query: 775 VMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVAL 834
+M +V++ A +D + ++MEYMP G L N L S + + + R +V L
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARF-YTAEVVL 184
Query: 835 ALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGY 882
AL+ + HS IH V ++DF +N + + T + T Y
Sbjct: 185 ALDAI---HSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVGTPDY 240
Query: 883 MAPE----YGVQGRVSTRGDVYSYGIMLMETFTGKKP 915
++PE G G D +S G+ L E G P
Sbjct: 241 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 726 DRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKV-FHQRYER--ALKSFQDECEVMKRIRH 781
D F LG G FG+VY+AR Q+ +A+KV F + E+ + E E+ +RH
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHF 841
N++++ + + L++E+ P G L L D + M ++A A LH+
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG-RFDEQRSATFMEELADA---LHY 129
Query: 842 GHSTPIIH-------YMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQGRV 893
H +IH ++ + + IA F S++ + + T+ Y+ PE ++G+
Sbjct: 130 CHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEM-IEGKT 188
Query: 894 -STRGDVYSYGIMLMETFTGKKPTD 917
+ D++ G++ E G P D
Sbjct: 189 HDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 726 DRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKV-FHQRYER--ALKSFQDECEVMKRIRH 781
D F LG G FG+VY+AR Q+ +A+KV F + E+ + E E+ +RH
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHF 841
N++++ + + L++E+ P G L L D + M ++A A LH+
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG-RFDEQRSATFMEELADA---LHY 130
Query: 842 GHSTPIIH-------YMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQGRV 893
H +IH ++ + + IA F S++ + + T+ Y+ PE ++G+
Sbjct: 131 CHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEM-IEGKT 189
Query: 894 -STRGDVYSYGIMLMETFTGKKPTD 917
+ D++ G++ E G P D
Sbjct: 190 HDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 94/205 (45%), Gaps = 23/205 (11%)
Query: 731 NNLLGIGSFGSVYVARLQDG----MEVAVKVFHQRYE-RALKSFQDECEVMKRIRHRNLV 785
N ++G G FG VY L D + AVK ++ + + F E +MK H N++
Sbjct: 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 786 KIISACSNDDFKALI-MEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHS 844
++ C + L+ + YM +G L N + + T + + + VA +++L S
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---S 210
Query: 845 TPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLAT--IGYMAPEYGVQ 890
+H +A ++DF +A+ + ++ S+ +T A + +MA E
Sbjct: 211 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 270
Query: 891 GRVSTRGDVYSYGIMLMETFTGKKP 915
+ +T+ DV+S+G++L E T P
Sbjct: 271 QKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 94/205 (45%), Gaps = 23/205 (11%)
Query: 731 NNLLGIGSFGSVYVARLQDG----MEVAVKVFHQRYE-RALKSFQDECEVMKRIRHRNLV 785
N ++G G FG VY L D + AVK ++ + + F E +MK H N++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 786 KIISACSNDDFKALI-MEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHS 844
++ C + L+ + YM +G L N + + T + + + VA +++L S
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---S 152
Query: 845 TPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLAT--IGYMAPEYGVQ 890
+H +A ++DF +A+ + ++ S+ +T A + +MA E
Sbjct: 153 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 212
Query: 891 GRVSTRGDVYSYGIMLMETFTGKKP 915
+ +T+ DV+S+G++L E T P
Sbjct: 213 QKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 94/205 (45%), Gaps = 23/205 (11%)
Query: 731 NNLLGIGSFGSVYVARLQDG----MEVAVKVFHQRYE-RALKSFQDECEVMKRIRHRNLV 785
N ++G G FG VY L D + AVK ++ + + F E +MK H N++
Sbjct: 40 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 786 KIISACSNDDFKALI-MEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHS 844
++ C + L+ + YM +G L N + + T + + + VA +++L S
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---S 156
Query: 845 TPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLAT--IGYMAPEYGVQ 890
+H +A ++DF +A+ + ++ S+ +T A + +MA E
Sbjct: 157 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 216
Query: 891 GRVSTRGDVYSYGIMLMETFTGKKP 915
+ +T+ DV+S+G++L E T P
Sbjct: 217 QKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 132/311 (42%), Gaps = 41/311 (13%)
Query: 717 SYHELLQATDRFSKNNLLGIGSFGSVYVA-RLQDGMEVAVKVFHQR-YERALKSFQDECE 774
Y ELL+ + + +G G F V +A + G VA+K+ + L + E E
Sbjct: 4 DYDELLKY---YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIE 60
Query: 775 VMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVAL 834
+K +RH+++ ++ + +++EY P G L + + S + + R+ + +
Sbjct: 61 ALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRV-VFRQIVS 119
Query: 835 ALEYLH---FGHS--TP----IIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAP 885
A+ Y+H + H P Y + DF + G +QT ++ Y AP
Sbjct: 120 AVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQT-CCGSLAYAAP 178
Query: 886 EYGVQGR--VSTRGDVYSYGIMLMETFTGKKPTDE---------IFIGELSLSRWV--ND 932
E +QG+ + + DV+S GI+L G P D+ I G+ + +W+ +
Sbjct: 179 EL-IQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSPSS 237
Query: 933 LLPISVMEVID-------TNLLSG----EERYFAAKEQSLLSILNLATECTIESPGKRIN 981
+L + M +D NLL+ ++ + + QS ++L +C E N
Sbjct: 238 ILLLQQMLQVDPKKRISMKNLLNHPWIMQDYNYPVEWQSKNPFIHLDDDCVTELSVHHRN 297
Query: 982 AREIVTGLLKI 992
R+ + L+ +
Sbjct: 298 NRQTMEDLISL 308
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 53/216 (24%), Positives = 95/216 (43%), Gaps = 31/216 (14%)
Query: 724 ATDRFSKNNLLGIGSFGSVY------VARLQDGMEVAVKVFHQRYE-RALKSFQDECEVM 776
A ++ + + LG GSFG VY V + + VA+K ++ R F +E VM
Sbjct: 8 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 67
Query: 777 KRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLD---------IFQRLN 827
K ++V+++ S +IME M G L++ L S ++ + + +
Sbjct: 68 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 127
Query: 828 IMIDVALALEYLHFGHSTPIIHY-------MVAH-----ISDFSIAKFLNGQDQLSMQTQ 875
+ ++A + YL+ + +H MVA I DF + + + D +
Sbjct: 128 MAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGK 184
Query: 876 TLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT 911
L + +M+PE G +T DV+S+G++L E T
Sbjct: 185 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 53/216 (24%), Positives = 95/216 (43%), Gaps = 31/216 (14%)
Query: 724 ATDRFSKNNLLGIGSFGSVY------VARLQDGMEVAVKVFHQRYE-RALKSFQDECEVM 776
A ++ + + LG GSFG VY V + + VA+K ++ R F +E VM
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 76
Query: 777 KRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLD---------IFQRLN 827
K ++V+++ S +IME M G L++ L S ++ + + +
Sbjct: 77 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 136
Query: 828 IMIDVALALEYLHFGHSTPIIHY-------MVAH-----ISDFSIAKFLNGQDQLSMQTQ 875
+ ++A + YL+ + +H MVA I DF + + + D +
Sbjct: 137 MAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGK 193
Query: 876 TLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT 911
L + +M+PE G +T DV+S+G++L E T
Sbjct: 194 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 53/216 (24%), Positives = 99/216 (45%), Gaps = 27/216 (12%)
Query: 730 KNNLLGIGSFGSVYVAR-LQDG----MEVAVKVFHQRYERALKSFQ---DECEVMKRIRH 781
K +LG G FG+V+ + +G + V +KV + R +SFQ D + + H
Sbjct: 17 KLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGR--QSFQAVTDHMLAIGSLDH 74
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHF 841
++V+++ C + L+ +Y+P GSL + + L LN + +A + YL
Sbjct: 75 AHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE- 132
Query: 842 GHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGV 889
++H +A ++DF +A L D+ + ++ I +MA E
Sbjct: 133 --EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIH 190
Query: 890 QGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGEL 924
G+ + + DV+SYG+ + E T G +P + + E+
Sbjct: 191 FGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEV 226
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 94/205 (45%), Gaps = 23/205 (11%)
Query: 731 NNLLGIGSFGSVYVARLQDG----MEVAVKVFHQRYE-RALKSFQDECEVMKRIRHRNLV 785
N ++G G FG VY L D + AVK ++ + + F E +MK H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 786 KIISACSNDDFKALI-MEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHS 844
++ C + L+ + YM +G L N + + T + + + VA +++L S
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---S 151
Query: 845 TPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLAT--IGYMAPEYGVQ 890
+H +A ++DF +A+ + ++ S+ +T A + +MA E
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 211
Query: 891 GRVSTRGDVYSYGIMLMETFTGKKP 915
+ +T+ DV+S+G++L E T P
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 94/205 (45%), Gaps = 23/205 (11%)
Query: 731 NNLLGIGSFGSVYVARLQDG----MEVAVKVFHQRYE-RALKSFQDECEVMKRIRHRNLV 785
N ++G G FG VY L D + AVK ++ + + F E +MK H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 786 KIISACSNDDFKALI-MEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHS 844
++ C + L+ + YM +G L N + + T + + + VA +++L S
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---S 151
Query: 845 TPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLAT--IGYMAPEYGVQ 890
+H +A ++DF +A+ + ++ S+ +T A + +MA E
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 211
Query: 891 GRVSTRGDVYSYGIMLMETFTGKKP 915
+ +T+ DV+S+G++L E T P
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 48/205 (23%), Positives = 91/205 (44%), Gaps = 26/205 (12%)
Query: 732 NLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALK---SFQDECEVMKRIRHRNLVKI 787
+ LG+G+FG V + Q G +VAVK+ +++ R+L + E + +K RH +++K+
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 788 ISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPI 847
S ++MEY+ G L+ C + + L + + H +
Sbjct: 77 YQVISTPTDFFMVMEYVSGG----ELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMV 132
Query: 848 IH------------YMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRV-- 893
+H +M A I+DF ++ ++ + L + + Y APE + GR+
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLR---DSCGSPNYAAPEV-ISGRLYA 188
Query: 894 STRGDVYSYGIMLMETFTGKKPTDE 918
D++S G++L G P D+
Sbjct: 189 GPEVDIWSCGVILYALLCGTLPFDD 213
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 94/205 (45%), Gaps = 23/205 (11%)
Query: 731 NNLLGIGSFGSVYVARLQDG----MEVAVKVFHQRYE-RALKSFQDECEVMKRIRHRNLV 785
N ++G G FG VY L D + AVK ++ + + F E +MK H N++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 786 KIISACSNDDFKALI-MEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHS 844
++ C + L+ + YM +G L N + + T + + + VA +++L S
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---S 149
Query: 845 TPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLAT--IGYMAPEYGVQ 890
+H +A ++DF +A+ + ++ S+ +T A + +MA E
Sbjct: 150 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 209
Query: 891 GRVSTRGDVYSYGIMLMETFTGKKP 915
+ +T+ DV+S+G++L E T P
Sbjct: 210 QKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 53.9 bits (128), Expect = 5e-07, Method: Composition-based stats.
Identities = 48/205 (23%), Positives = 91/205 (44%), Gaps = 26/205 (12%)
Query: 732 NLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALK---SFQDECEVMKRIRHRNLVKI 787
+ LG+G+FG V + Q G +VAVK+ +++ R+L + E + +K RH +++K+
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 788 ISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPI 847
S ++MEY+ G L+ C + + L + + H +
Sbjct: 77 YQVISTPTDFFMVMEYVSGG----ELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMV 132
Query: 848 IH------------YMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRV-- 893
+H +M A I+DF ++ ++ + L + + Y APE + GR+
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRT---SCGSPNYAAPEV-ISGRLYA 188
Query: 894 STRGDVYSYGIMLMETFTGKKPTDE 918
D++S G++L G P D+
Sbjct: 189 GPEVDIWSCGVILYALLCGTLPFDD 213
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 722 LQATDRFSKNNLLGIGSFG-SVYVARLQDGMEVAVKVFH--QRYERALKSFQDECEVMKR 778
Q+ +++ + +G GSFG ++ V +DG + +K + + + + + E V+
Sbjct: 20 FQSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLAN 79
Query: 779 IRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQR---LNIMIDVALA 835
++H N+V+ + + ++M+Y G L R+ + +L FQ L+ + + LA
Sbjct: 80 MKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVL--FQEDQILDWFVQICLA 137
Query: 836 LEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLSMQTQTLATIGYM 883
L+++ H I+H + + DF IA+ LN +L+ + T Y+
Sbjct: 138 LKHV---HDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELA--RACIGTPYYL 192
Query: 884 APEYGVQGRVSTRGDVYSYGIMLMETFTGK 913
+PE + + D+++ G +L E T K
Sbjct: 193 SPEICENKPYNNKSDIWALGCVLYELCTLK 222
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 53.5 bits (127), Expect = 5e-07, Method: Composition-based stats.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 726 DRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKV-FHQRYER--ALKSFQDECEVMKRIRH 781
D F LG G FG+VY+AR Q+ +A+KV F + E+ + E E+ +RH
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHF 841
N++++ + + L++E+ P G L L D + M ++A A LH+
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG-RFDEQRSATFMEELADA---LHY 129
Query: 842 GHSTPIIH-------YMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQGRV 893
H +IH ++ + + IA F S++ + + T+ Y+ PE ++G+
Sbjct: 130 CHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEM-IEGKT 188
Query: 894 -STRGDVYSYGIMLMETFTGKKPTD 917
+ D++ G++ E G P D
Sbjct: 189 HDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 94/205 (45%), Gaps = 23/205 (11%)
Query: 731 NNLLGIGSFGSVYVARLQDG----MEVAVKVFHQRYE-RALKSFQDECEVMKRIRHRNLV 785
N ++G G FG VY L D + AVK ++ + + F E +MK H N++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 786 KIISACSNDDFKALI-MEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHS 844
++ C + L+ + YM +G L N + + T + + + VA +++L S
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---S 152
Query: 845 TPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLAT--IGYMAPEYGVQ 890
+H +A ++DF +A+ + ++ S+ +T A + +MA E
Sbjct: 153 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQT 212
Query: 891 GRVSTRGDVYSYGIMLMETFTGKKP 915
+ +T+ DV+S+G++L E T P
Sbjct: 213 QKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 51/213 (23%), Positives = 93/213 (43%), Gaps = 25/213 (11%)
Query: 724 ATDRFSKNNLLGIGSFGSVY------VARLQDGMEVAVKVFHQRYE-RALKSFQDECEVM 776
A ++ + + LG GSFG VY V + + VA+K ++ R F +E VM
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 69
Query: 777 KRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLD---------IFQRLN 827
K ++V+++ S +IME M G L++ L S ++ + + +
Sbjct: 70 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 129
Query: 828 IMIDVALALEYLH---FGH------STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLA 878
+ ++A + YL+ F H + + I DF + + + D + L
Sbjct: 130 MAGEIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 189
Query: 879 TIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT 911
+ +M+PE G +T DV+S+G++L E T
Sbjct: 190 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 53/216 (24%), Positives = 95/216 (43%), Gaps = 31/216 (14%)
Query: 724 ATDRFSKNNLLGIGSFGSVY------VARLQDGMEVAVKVFHQRYE-RALKSFQDECEVM 776
A ++ + + LG GSFG VY V + + VA+K ++ R F +E VM
Sbjct: 14 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 73
Query: 777 KRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLD---------IFQRLN 827
K ++V+++ S +IME M G L++ L S ++ + + +
Sbjct: 74 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 133
Query: 828 IMIDVALALEYLHFGHSTPIIHY-------MVAH-----ISDFSIAKFLNGQDQLSMQTQ 875
+ ++A + YL+ + +H MVA I DF + + + D +
Sbjct: 134 MAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 190
Query: 876 TLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT 911
L + +M+PE G +T DV+S+G++L E T
Sbjct: 191 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 53/216 (24%), Positives = 95/216 (43%), Gaps = 31/216 (14%)
Query: 724 ATDRFSKNNLLGIGSFGSVY------VARLQDGMEVAVKVFHQRYE-RALKSFQDECEVM 776
A ++ + + LG GSFG VY V + + VA+K ++ R F +E VM
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 69
Query: 777 KRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLD---------IFQRLN 827
K ++V+++ S +IME M G L++ L S ++ + + +
Sbjct: 70 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 129
Query: 828 IMIDVALALEYLHFGHSTPIIHY-------MVAH-----ISDFSIAKFLNGQDQLSMQTQ 875
+ ++A + YL+ + +H MVA I DF + + + D +
Sbjct: 130 MAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 186
Query: 876 TLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT 911
L + +M+PE G +T DV+S+G++L E T
Sbjct: 187 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 53/216 (24%), Positives = 95/216 (43%), Gaps = 31/216 (14%)
Query: 724 ATDRFSKNNLLGIGSFGSVY------VARLQDGMEVAVKVFHQRYE-RALKSFQDECEVM 776
A ++ + + LG GSFG VY V + + VA+K ++ R F +E VM
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 75
Query: 777 KRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLD---------IFQRLN 827
K ++V+++ S +IME M G L++ L S ++ + + +
Sbjct: 76 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 135
Query: 828 IMIDVALALEYLHFGHSTPIIHY-------MVAH-----ISDFSIAKFLNGQDQLSMQTQ 875
+ ++A + YL+ + +H MVA I DF + + + D +
Sbjct: 136 MAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 192
Query: 876 TLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT 911
L + +M+PE G +T DV+S+G++L E T
Sbjct: 193 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 53/216 (24%), Positives = 95/216 (43%), Gaps = 31/216 (14%)
Query: 724 ATDRFSKNNLLGIGSFGSVY------VARLQDGMEVAVKVFHQRYE-RALKSFQDECEVM 776
A ++ + + LG GSFG VY V + + VA+K ++ R F +E VM
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 75
Query: 777 KRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLD---------IFQRLN 827
K ++V+++ S +IME M G L++ L S ++ + + +
Sbjct: 76 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 135
Query: 828 IMIDVALALEYLHFGHSTPIIHY-------MVAH-----ISDFSIAKFLNGQDQLSMQTQ 875
+ ++A + YL+ + +H MVA I DF + + + D +
Sbjct: 136 MAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 192
Query: 876 TLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT 911
L + +M+PE G +T DV+S+G++L E T
Sbjct: 193 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 53/216 (24%), Positives = 95/216 (43%), Gaps = 31/216 (14%)
Query: 724 ATDRFSKNNLLGIGSFGSVY------VARLQDGMEVAVKVFHQRYE-RALKSFQDECEVM 776
A ++ + + LG GSFG VY V + + VA+K ++ R F +E VM
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 82
Query: 777 KRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLD---------IFQRLN 827
K ++V+++ S +IME M G L++ L S ++ + + +
Sbjct: 83 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 142
Query: 828 IMIDVALALEYLHFGHSTPIIHY-------MVAH-----ISDFSIAKFLNGQDQLSMQTQ 875
+ ++A + YL+ + +H MVA I DF + + + D +
Sbjct: 143 MAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 199
Query: 876 TLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT 911
L + +M+PE G +T DV+S+G++L E T
Sbjct: 200 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 53/216 (24%), Positives = 95/216 (43%), Gaps = 31/216 (14%)
Query: 724 ATDRFSKNNLLGIGSFGSVY------VARLQDGMEVAVKVFHQRYE-RALKSFQDECEVM 776
A ++ + + LG GSFG VY V + + VA+K ++ R F +E VM
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 76
Query: 777 KRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLD---------IFQRLN 827
K ++V+++ S +IME M G L++ L S ++ + + +
Sbjct: 77 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 136
Query: 828 IMIDVALALEYLHFGHSTPIIHY-------MVAH-----ISDFSIAKFLNGQDQLSMQTQ 875
+ ++A + YL+ + +H MVA I DF + + + D +
Sbjct: 137 MAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 193
Query: 876 TLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT 911
L + +M+PE G +T DV+S+G++L E T
Sbjct: 194 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs
Length = 301
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 128/298 (42%), Gaps = 43/298 (14%)
Query: 726 DRFSKNNLLGIGSFGSVY-VARLQDGMEVAVKVFHQRYERALK-SFQDECEVMKRIRHRN 783
D F K + LG G+ G V+ V+ G+ +A K+ H + A++ E +V+
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLY-SGTCMLDIFQRLNIMIDVALALEYLHFG 842
+V A +D ++ ME+M GSL+ L +G I +++I V L YL
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK 126
Query: 843 HSTPIIHY-------MVAHISDFSIAKF-LNGQDQLSMQTQTLATIGYMAPEYGVQGRVS 894
H I+H +V + + F ++GQ M + + T YM+PE S
Sbjct: 127 HK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTRSYMSPERLQGTHYS 184
Query: 895 TRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYF 954
+ D++S G+ L+E G+ P + I EL L VN+ P + + + S
Sbjct: 185 VQSDIWSMGLSLVEMAVGRYPRPPMAIFEL-LDYIVNEPPP-----KLPSAVFS------ 232
Query: 955 AAKEQSLLSILNLATECTIESPGKRINAREI-VTGLLKIRDT--------LVKSVGMN 1003
L + +C I++P +R + +++ V +K D L ++G+N
Sbjct: 233 -------LEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEVDFAGWLCSTIGLN 283
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex
With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex
With Ch4858061 And Mgatp
Length = 307
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 130/305 (42%), Gaps = 47/305 (15%)
Query: 726 DRFSKNNLLGIGSFGSVY-VARLQDGMEVAVKVFHQRYERALK-SFQDECEVMKRIRHRN 783
D F K + LG G+ G V+ V+ G+ +A K+ H + A++ E +V+
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLY-SGTCMLDIFQRLNIMIDVALALEYLHFG 842
+V A +D ++ ME+M GSL+ L +G I +++I V L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK 123
Query: 843 HSTPIIHY-------MVAHISDFSIAKF-LNGQDQLSMQTQTLATIGYMAPEYGVQGRVS 894
H I+H +V + + F ++GQ SM + T YM+PE S
Sbjct: 124 HK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYS 181
Query: 895 TRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVID-------TNLL 947
+ D++S G+ L+E G+ P E S P+++ E++D L
Sbjct: 182 VQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRP-------PMAIFELLDYIVNEPPPKLP 234
Query: 948 SGEERYFAAKEQSLLSILNLATECTIESPGKRINAREI-VTGLLKIRDT--------LVK 998
SG F+ L + +C I++P +R + +++ V +K D L
Sbjct: 235 SG---VFS------LEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEVDFAGWLCS 285
Query: 999 SVGMN 1003
++G+N
Sbjct: 286 TIGLN 290
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 53.1 bits (126), Expect = 8e-07, Method: Composition-based stats.
Identities = 53/216 (24%), Positives = 94/216 (43%), Gaps = 31/216 (14%)
Query: 724 ATDRFSKNNLLGIGSFGSVY------VARLQDGMEVAVKVFHQRYE-RALKSFQDECEVM 776
A ++ + + LG GSFG VY V + + VA+K ++ R F +E VM
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 82
Query: 777 KRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCML---------DIFQRLN 827
K ++V+++ S +IME M G L++ L S + + + +
Sbjct: 83 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQ 142
Query: 828 IMIDVALALEYLHFGHSTPIIHY-------MVAH-----ISDFSIAKFLNGQDQLSMQTQ 875
+ ++A + YL+ + +H MVA I DF + + + D +
Sbjct: 143 MAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 199
Query: 876 TLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT 911
L + +M+PE G +T DV+S+G++L E T
Sbjct: 200 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 53.1 bits (126), Expect = 8e-07, Method: Composition-based stats.
Identities = 53/216 (24%), Positives = 94/216 (43%), Gaps = 31/216 (14%)
Query: 724 ATDRFSKNNLLGIGSFGSVY------VARLQDGMEVAVKVFHQRYE-RALKSFQDECEVM 776
A ++ + + LG GSFG VY V + + VA+K ++ R F +E VM
Sbjct: 13 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 72
Query: 777 KRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCML---------DIFQRLN 827
K ++V+++ S +IME M G L++ L S + + + +
Sbjct: 73 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQ 132
Query: 828 IMIDVALALEYLHFGHSTPIIHY-------MVAH-----ISDFSIAKFLNGQDQLSMQTQ 875
+ ++A + YL+ + +H MVA I DF + + + D +
Sbjct: 133 MAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 189
Query: 876 TLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT 911
L + +M+PE G +T DV+S+G++L E T
Sbjct: 190 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 53.1 bits (126), Expect = 8e-07, Method: Composition-based stats.
Identities = 53/210 (25%), Positives = 97/210 (46%), Gaps = 17/210 (8%)
Query: 740 GSVYVARLQDGMEVAVKVFHQR--YERALKSFQDECEVMKRIRHRNLVKIISACSND--D 795
G ++ R Q G ++ VKV R R + F +EC ++ H N++ ++ AC +
Sbjct: 24 GELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 796 FKALIMEYMPNGSLENRLYSGT-CMLDIFQRLNIMIDVALALEYLHFGHSTPII--HYMV 852
LI +MP GSL N L+ GT ++D Q + +D+A + +LH P+I H +
Sbjct: 83 HPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH--TLEPLIPRHALN 140
Query: 853 AH---ISDFSIAKFLNGQDQLSMQTQ-TLATIGYMAPEYGVQGRVSTR---GDVYSYGIM 905
+ I + A+ + S Q+ + ++APE + T D++S+ ++
Sbjct: 141 SRSVMIDEDMTARISMADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVL 200
Query: 906 LMETFTGKKPTDEIFIGELSLSRWVNDLLP 935
L E T + P ++ E+ + + L P
Sbjct: 201 LWELVTREVPFADLSNMEIGMKVALEGLRP 230
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 94/218 (43%), Gaps = 25/218 (11%)
Query: 718 YHELLQATDRFSKNNLLGIGSFGSVYVA---RLQDGMEVAVKVFH-QRYERALKSFQDEC 773
Y + + + F+K +G GSFG V+ R Q VA+K+ + E ++ Q E
Sbjct: 19 YFQSMDPEELFTKLEKIGKGSFGEVFKGIDNRTQKV--VAIKIIDLEEAEDEIEDIQQEI 76
Query: 774 EVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVA 833
V+ + + K + D +IMEY+ GS + L G LD Q I+ ++
Sbjct: 77 TVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREIL 134
Query: 834 LALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLSMQTQTLATIG 881
L+YLH S IH + ++DF +A L D + + T
Sbjct: 135 KGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNTFVGTPF 189
Query: 882 YMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEI 919
+MAPE Q ++ D++S GI +E G+ P E+
Sbjct: 190 WMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 227
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 52.8 bits (125), Expect = 9e-07, Method: Composition-based stats.
Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 23/203 (11%)
Query: 731 NNLLGIGSFGSVY--VARLQDGMEVAVKVFHQRYERAL---KSFQDECEVMKRIRHRNLV 785
N +LG G FG VY V G ++ V V + + L + F E +MK + H ++V
Sbjct: 29 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 88
Query: 786 KIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHST 845
K+I + +IME P G L + L L + + + + A+ YL S
Sbjct: 89 KLIGIIEEEP-TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYL---ESI 144
Query: 846 PIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRV 893
+H +A + DF +++++ +D L I +M+PE R
Sbjct: 145 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP-IKWMSPESINFRRF 203
Query: 894 STRGDVYSYGIMLMETFT-GKKP 915
+T DV+ + + + E + GK+P
Sbjct: 204 TTASDVWMFAVCMWEILSFGKQP 226
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 52.8 bits (125), Expect = 9e-07, Method: Composition-based stats.
Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 23/203 (11%)
Query: 731 NNLLGIGSFGSVY--VARLQDGMEVAVKVFHQRYERAL---KSFQDECEVMKRIRHRNLV 785
N +LG G FG VY V G ++ V V + + L + F E +MK + H ++V
Sbjct: 13 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 72
Query: 786 KIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHST 845
K+I + +IME P G L + L L + + + + A+ YL S
Sbjct: 73 KLIGIIEEEP-TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYL---ESI 128
Query: 846 PIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRV 893
+H +A + DF +++++ +D L I +M+PE R
Sbjct: 129 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP-IKWMSPESINFRRF 187
Query: 894 STRGDVYSYGIMLMETFT-GKKP 915
+T DV+ + + + E + GK+P
Sbjct: 188 TTASDVWMFAVCMWEILSFGKQP 210
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 52.8 bits (125), Expect = 9e-07, Method: Composition-based stats.
Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 23/203 (11%)
Query: 731 NNLLGIGSFGSVY--VARLQDGMEVAVKVFHQRYERAL---KSFQDECEVMKRIRHRNLV 785
N +LG G FG VY V G ++ V V + + L + F E +MK + H ++V
Sbjct: 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 76
Query: 786 KIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHST 845
K+I + +IME P G L + L L + + + + A+ YL S
Sbjct: 77 KLIGIIEEEP-TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYL---ESI 132
Query: 846 PIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRV 893
+H +A + DF +++++ +D L I +M+PE R
Sbjct: 133 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP-IKWMSPESINFRRF 191
Query: 894 STRGDVYSYGIMLMETFT-GKKP 915
+T DV+ + + + E + GK+P
Sbjct: 192 TTASDVWMFAVCMWEILSFGKQP 214
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 95/216 (43%), Gaps = 31/216 (14%)
Query: 724 ATDRFSKNNLLGIGSFGSVY------VARLQDGMEVAVKVFHQRYE-RALKSFQDECEVM 776
A ++ + + LG GSFG VY V + + VA+K ++ R F +E VM
Sbjct: 45 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 104
Query: 777 KRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLD---------IFQRLN 827
K ++V+++ S +IME M G L++ L S ++ + + +
Sbjct: 105 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 164
Query: 828 IMIDVALALEYLHFGHSTPIIHY-------MVAH-----ISDFSIAKFLNGQDQLSMQTQ 875
+ ++A + YL+ + +H MVA I DF + + + D +
Sbjct: 165 MAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 221
Query: 876 TLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT 911
L + +M+PE G +T DV+S+G++L E T
Sbjct: 222 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 52/203 (25%), Positives = 90/203 (44%), Gaps = 31/203 (15%)
Query: 734 LGIGSFGSVYVARLQDGME------VAVKVFHQRYE-RALKSFQDECEVMKRIRHRNLVK 786
LG GSFG VY +D ++ VAVK ++ R F +E VMK ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 787 IISACSNDDFKALIMEYMPNGSLENRLYS---------GTCMLDIFQRLNIMIDVALALE 837
++ S ++ME M +G L++ L S G + + + + ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 838 YLHFGHSTPIIHY-------MVAH-----ISDFSIAKFLNGQDQLSMQTQTLATIGYMAP 885
YL ++ +H MVAH I DF + + + + L + +MAP
Sbjct: 145 YL---NAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAP 201
Query: 886 EYGVQGRVSTRGDVYSYGIMLME 908
E G +T D++S+G++L E
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWE 224
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 26/203 (12%)
Query: 733 LLGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKS----FQDECEVMKRIRHRNLVKII 788
++G G+FG V + R + +V ++E +S F +E ++M +V++
Sbjct: 82 VIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 141
Query: 789 SACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPII 848
A +D + ++MEYMP G L N L S + + + + +V LAL+ + HS +I
Sbjct: 142 CAFQDDKYLYMVMEYMPGGDLVN-LMSNYDVPEKWAKF-YTAEVVLALDAI---HSMGLI 196
Query: 849 HYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPE----YGVQGR 892
H V ++DF ++ + T + T Y++PE G G
Sbjct: 197 HRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDT-AVGTPDYISPEVLKSQGGDGY 255
Query: 893 VSTRGDVYSYGIMLMETFTGKKP 915
D +S G+ L E G P
Sbjct: 256 YGRECDWWSVGVFLFEMLVGDTP 278
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 130/298 (43%), Gaps = 39/298 (13%)
Query: 726 DRFSKNNLLGIGSFGSVY-VARLQDGMEVAVKVFHQRYERALK-SFQDECEVMKRIRHRN 783
D F K + LG G+ G V+ V+ G+ +A K+ H + A++ E +V+
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 84
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLY-SGTCMLDIFQRLNIMIDVALALEYLHFG 842
+V A +D ++ ME+M GSL+ L +G I +++I V L YL
Sbjct: 85 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK 142
Query: 843 HSTPIIHY-------MVAHISDFSIAKF-LNGQDQLSMQTQTLATIGYMAPEYGVQGRVS 894
H I+H +V + + F ++GQ SM + T YM+PE S
Sbjct: 143 HK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYS 200
Query: 895 TRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYF 954
+ D++S G+ L+E G+ P IG S S + +LL V E L SG F
Sbjct: 201 VQSDIWSMGLSLVEMAVGRYP-----IGSGSGSMAIFELLDYIVNEP-PPKLPSG---VF 251
Query: 955 AAKEQSLLSILNLATECTIESPGKRINAREI-VTGLLKIRDT--------LVKSVGMN 1003
+ L + +C I++P +R + +++ V +K D L ++G+N
Sbjct: 252 S------LEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEVDFAGWLCSTIGLN 303
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 53/196 (27%), Positives = 94/196 (47%), Gaps = 22/196 (11%)
Query: 734 LGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACS 792
+G GS G V +AR + G +VAVK+ R ++ + +E +M+ +H N+V++ +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 793 NDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV 852
+ ++ME++ G+L + + L+ Q + V AL YL H+ +IH
Sbjct: 113 VGEELWVLMEFLQGGALTDIV--SQVRLNEEQIATVCEAVLQALAYL---HAQGVIH--- 164
Query: 853 AHISDFSIAKFLNGQDQLS-------------MQTQTLATIGYMAPEYGVQGRVSTRGDV 899
I SI L+G+ +LS + + T +MAPE + +T D+
Sbjct: 165 RDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDI 224
Query: 900 YSYGIMLMETFTGKKP 915
+S GIM++E G+ P
Sbjct: 225 WSLGIMVIEMVDGEPP 240
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 58/223 (26%), Positives = 102/223 (45%), Gaps = 26/223 (11%)
Query: 734 LGIGSFGSVYVA-RLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACS 792
+G GS G V +A G +VAVK R ++ + +E +M+ H N+V + S+
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 793 NDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV 852
D ++ME++ G+L + + + T M + Q + + V AL YL H+ +IH +
Sbjct: 113 VGDELWVVMEFLEGGALTD-IVTHTRMNE-EQIATVCLSVLRALSYL---HNQGVIHRDI 167
Query: 853 A------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVY 900
+SDF ++ ++ + + T +MAPE + T D++
Sbjct: 168 KSDSILLTSDGRIKLSDFGFCAQVS--KEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIW 225
Query: 901 SYGIMLMETFTGKKPTDEIFIGE--LSLSRWVNDLLPISVMEV 941
S GIM++E G+ P + E L R + D LP V ++
Sbjct: 226 SLGIMVIEMIDGEPP----YFNEPPLQAMRRIRDSLPPRVKDL 264
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 113/267 (42%), Gaps = 60/267 (22%)
Query: 688 LKWKLIRCWKSITGSSNDGINSPQAIRRFSYHELLQATDRFSKNNL-----LGIGSFGSV 742
++WK+I +S G+S I+ Q Y+E + F +NNL LG G+FG V
Sbjct: 14 VRWKII---ESYEGNSYTFIDPTQ----LPYNEKWE----FPRNNLQFGKTLGAGAFGKV 62
Query: 743 YVARL-----QDG-MEVAVKVF----HQRYERALKSFQDECEVMKRI-RHRNLVKIISAC 791
A +D ++VAVK+ H + AL S E ++M + +H N+V ++ AC
Sbjct: 63 VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS---ELKIMSHLGQHENIVNLLGAC 119
Query: 792 SNDDFKALIMEYMPNGSLENRL---------------YSGTCMLDIFQRLNIMIDVALAL 836
++ +I EY G L N L ++ L L+ VA +
Sbjct: 120 THGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGM 179
Query: 837 EYLHFGHSTPIIHY------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMA 884
+L S IH VA I DF +A+ + ++ + +MA
Sbjct: 180 AFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMA 236
Query: 885 PEYGVQGRVSTRGDVYSYGIMLMETFT 911
PE + + DV+SYGI+L E F+
Sbjct: 237 PESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 90/188 (47%), Gaps = 16/188 (8%)
Query: 194 LYLRFNNLSGAIPKEIGNLTKLKDIILNDNELR---GEIPQEMGNLPYLVRLTLATNNLV 250
L L+ N LS K LTKL+ + LNDN+L+ I +E+ NL L T+N +
Sbjct: 42 LDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETL----WVTDNKL 97
Query: 251 GVVPFTIFN-MSTLKKLSLLENTLWGSLPSRIDLSLPNVEFLNLGTNRFSGNIPSSITNA 309
+P +F+ + L +L L N L SLP R+ SL + +L+LG N ++P + +
Sbjct: 98 QALPIGVFDQLVNLAELRLDRNQL-KSLPPRVFDSLTKLTYLSLGYNELQ-SLPKGVFDK 155
Query: 310 -SKLTVFQLRGNSFSGFIPNTIGNLRNLEFLNIADNYLTSSTPELSFLSSLTNCQKIRVL 368
+ L +L N L L+ L + +N L PE +F S +K+++L
Sbjct: 156 LTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQL-KRVPEGAFDS----LEKLKML 210
Query: 369 ILAGNPLD 376
L NP D
Sbjct: 211 QLQENPWD 218
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 11/221 (4%)
Query: 54 SVCSWIGITCGVNSHKVIVLNISGFNLQGTIPPQLGNLSSLETLDLSHNKLSGNIPSSIF 113
++C G C N++K V + S L IP + + + LDL NKLS ++PS F
Sbjct: 3 ALCKKDGGVCSCNNNKNSV-DCSSKKLTA-IPSNIP--ADTKKLDLQSNKLS-SLPSKAF 57
Query: 114 NMHT-LKLLDFRDNQLFGSLSSFIF-NMSSMLGIDLSINRFSGELPANICXXXXXXXXXX 171
+ T L+LL DN+L +L + IF + ++ + ++ N+ LP +
Sbjct: 58 HRLTKLRLLYLNDNKL-QTLPAGIFKELKNLETLWVTDNKLQA-LPIGVFDQLVNLAELR 115
Query: 172 XGRNMFHGKIPSTLSKCKQLEGLYLRFNNLSGAIPKEI-GNLTKLKDIILNDNELRGEIP 230
RN P +L L L +N L ++PK + LT LK++ L +N+L+
Sbjct: 116 LDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ-SLPKGVFDKLTSLKELRLYNNQLKRVPE 174
Query: 231 QEMGNLPYLVRLTLATNNLVGVVPFTIFNMSTLKKLSLLEN 271
L L L L N L V ++ LK L L EN
Sbjct: 175 GAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 62/140 (44%), Gaps = 8/140 (5%)
Query: 460 AKLDKLILHGNKFSGAIPSCSGNLTSLRALYLGSNRFTSALPSTIW-NLKDILFFDVSSN 518
A KL L NK S LT LR LYL N+ + LP+ I+ LK++ V+ N
Sbjct: 37 ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQT-LPAGIFKELKNLETLWVTDN 95
Query: 519 SLDGPLSLDIGNLKVVI---ELNLSRNNLSGDIPITIGGLKNLQKLFLANNRLEGPIPES 575
L +L IG ++ EL L RN L P L L L L N L+
Sbjct: 96 KLQ---ALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGV 152
Query: 576 FSGLSSLEILDLSKNKISGV 595
F L+SL+ L L N++ V
Sbjct: 153 FDKLTSLKELRLYNNQLKRV 172
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 68/162 (41%), Gaps = 4/162 (2%)
Query: 431 TFSRLLNLQGLGLAFNKLARSIPDEI-CHLAKLDKLILHGNKFSGAIPSCSGNLTSLRAL 489
F RL L+ L L NKL +++P I L L+ L + NK L +L L
Sbjct: 56 AFHRLTKLRLLYLNDNKL-QTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAEL 114
Query: 490 YLGSNRFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRNNLSGDIP 549
L N+ S P +L + + + N L L + EL L N L
Sbjct: 115 RLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPE 174
Query: 550 ITIGGLKNLQKLFLANNRLEGPIPE-SFSGLSSLEILDLSKN 590
L L+ L L NN+L+ +PE +F L L++L L +N
Sbjct: 175 GAFDKLTELKTLKLDNNQLKR-VPEGAFDSLEKLKMLQLQEN 215
Score = 33.5 bits (75), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 8/128 (6%)
Query: 471 KFSGAIPSCSGNLTSLRALYLGSNRFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGN 530
K G + SC+ N S+ S++ +A+PS I D D+ SN L S
Sbjct: 6 KKDGGVCSCNNNKNSVDC----SSKKLTAIPSNI--PADTKKLDLQSNKLSSLPSKAFHR 59
Query: 531 LKVVIELNLSRNNLSGDIPITI-GGLKNLQKLFLANNRLEGPIPESFSGLSSLEILDLSK 589
L + L L+ N L +P I LKNL+ L++ +N+L+ F L +L L L +
Sbjct: 60 LTKLRLLYLNDNKLQT-LPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDR 118
Query: 590 NKISGVIP 597
N++ + P
Sbjct: 119 NQLKSLPP 126
Score = 33.1 bits (74), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 6/160 (3%)
Query: 439 QGLGLAFNKLARSIPDEICH-LAKLDKLILHGNKFSGAIPSCSGNLTSLRALYLGSNRFT 497
+ L L NKL+ S+P + H L KL L L+ NK L +L L++ N+
Sbjct: 40 KKLDLQSNKLS-SLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKL- 97
Query: 498 SALPSTIWN-LKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRNNLSGDIPITIGGLK 556
ALP +++ L ++ + N L +L + L+L N L L
Sbjct: 98 QALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLT 157
Query: 557 NLQKLFLANNRLEGPIPE-SFSGLSSLEILDLSKNKISGV 595
+L++L L NN+L+ +PE +F L+ L+ L L N++ V
Sbjct: 158 SLKELRLYNNQLKR-VPEGAFDKLTELKTLKLDNNQLKRV 196
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 50/219 (22%), Positives = 91/219 (41%), Gaps = 27/219 (12%)
Query: 716 FSYHELLQATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERA---LKSFQD 771
F H +DR+ +LG GSFG V + + + G E AVKV +R + +S
Sbjct: 22 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR 81
Query: 772 ECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMID 831
E +++K++ H N++K+ + + L+ E G L + + S F ++
Sbjct: 82 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIIS----RKRFSEVDAARI 137
Query: 832 VALALEYLHFGHSTPIIHYMVA---------------HISDFSIAKFLNGQDQLSMQTQT 876
+ L + + H I+H + I DF ++ ++
Sbjct: 138 IRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMK---DK 194
Query: 877 LATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKP 915
+ T Y+APE + G + DV+S G++L +G P
Sbjct: 195 IGTAYYIAPEV-LHGTYDEKCDVWSTGVILYILLSGCPP 232
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 61/229 (26%), Positives = 99/229 (43%), Gaps = 53/229 (23%)
Query: 726 DRFSKNNLLGIGSFGSVYVA-RLQDGMEVAVKVFHQRYERALKSFQD---------ECEV 775
D + + LG G+ G V +A + +VA+K+ +R + A+ S ++ E E+
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKR-KFAIGSAREADPALNVETEIEI 68
Query: 776 MKRIRHRNLVKIISACSNDDFKALIMEYMPNGSL------ENRLYSGTCMLDIFQRLNIM 829
+K++ H ++KI + +D+ +++E M G L RL TC L +Q L
Sbjct: 69 LKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML--- 124
Query: 830 IDVALALEYLHFGHSTPIIHY---------------MVAHISDFSIAKFLNGQDQLSMQT 874
LA++YL H IIH + I+DF +K L + S+
Sbjct: 125 ----LAVQYL---HENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMR 174
Query: 875 QTLATIGYMAPEYGVQGRVSTRG-----DVYSYGIMLMETFTGKKPTDE 918
T Y+APE V V T G D +S G++L +G P E
Sbjct: 175 TLCGTPTYLAPEVLVS--VGTAGYNRAVDCWSLGVILFICLSGYPPFSE 221
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 61/229 (26%), Positives = 99/229 (43%), Gaps = 53/229 (23%)
Query: 726 DRFSKNNLLGIGSFGSVYVA-RLQDGMEVAVKVFHQRYERALKSFQD---------ECEV 775
D + + LG G+ G V +A + +VA+K+ +R + A+ S ++ E E+
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKR-KFAIGSAREADPALNVETEIEI 68
Query: 776 MKRIRHRNLVKIISACSNDDFKALIMEYMPNGSL------ENRLYSGTCMLDIFQRLNIM 829
+K++ H ++KI + +D+ +++E M G L RL TC L +Q L
Sbjct: 69 LKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML--- 124
Query: 830 IDVALALEYLHFGHSTPIIHY---------------MVAHISDFSIAKFLNGQDQLSMQT 874
LA++YL H IIH + I+DF +K L + S+
Sbjct: 125 ----LAVQYL---HENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMR 174
Query: 875 QTLATIGYMAPEYGVQGRVSTRG-----DVYSYGIMLMETFTGKKPTDE 918
T Y+APE V V T G D +S G++L +G P E
Sbjct: 175 TLCGTPTYLAPEVLVS--VGTAGYNRAVDCWSLGVILFICLSGYPPFSE 221
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 61/229 (26%), Positives = 99/229 (43%), Gaps = 53/229 (23%)
Query: 726 DRFSKNNLLGIGSFGSVYVA-RLQDGMEVAVKVFHQRYERALKSFQD---------ECEV 775
D + + LG G+ G V +A + +VA+K+ +R + A+ S ++ E E+
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKR-KFAIGSAREADPALNVETEIEI 67
Query: 776 MKRIRHRNLVKIISACSNDDFKALIMEYMPNGSL------ENRLYSGTCMLDIFQRLNIM 829
+K++ H ++KI + +D+ +++E M G L RL TC L +Q L
Sbjct: 68 LKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML--- 123
Query: 830 IDVALALEYLHFGHSTPIIHY---------------MVAHISDFSIAKFLNGQDQLSMQT 874
LA++YL H IIH + I+DF +K L + S+
Sbjct: 124 ----LAVQYL---HENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMR 173
Query: 875 QTLATIGYMAPEYGVQGRVSTRG-----DVYSYGIMLMETFTGKKPTDE 918
T Y+APE V V T G D +S G++L +G P E
Sbjct: 174 TLCGTPTYLAPEVLVS--VGTAGYNRAVDCWSLGVILFICLSGYPPFSE 220
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 61/229 (26%), Positives = 99/229 (43%), Gaps = 53/229 (23%)
Query: 726 DRFSKNNLLGIGSFGSVYVA-RLQDGMEVAVKVFHQRYERALKSFQD---------ECEV 775
D + + LG G+ G V +A + +VA+K+ +R + A+ S ++ E E+
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKR-KFAIGSAREADPALNVETEIEI 68
Query: 776 MKRIRHRNLVKIISACSNDDFKALIMEYMPNGSL------ENRLYSGTCMLDIFQRLNIM 829
+K++ H ++KI + +D+ +++E M G L RL TC L +Q L
Sbjct: 69 LKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML--- 124
Query: 830 IDVALALEYLHFGHSTPIIHY---------------MVAHISDFSIAKFLNGQDQLSMQT 874
LA++YL H IIH + I+DF +K L + S+
Sbjct: 125 ----LAVQYL---HENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMR 174
Query: 875 QTLATIGYMAPEYGVQGRVSTRG-----DVYSYGIMLMETFTGKKPTDE 918
T Y+APE V V T G D +S G++L +G P E
Sbjct: 175 TLCGTPTYLAPEVLVS--VGTAGYNRAVDCWSLGVILFICLSGYPPFSE 221
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 61/229 (26%), Positives = 99/229 (43%), Gaps = 53/229 (23%)
Query: 726 DRFSKNNLLGIGSFGSVYVA-RLQDGMEVAVKVFHQRYERALKSFQD---------ECEV 775
D + + LG G+ G V +A + +VA+K+ +R + A+ S ++ E E+
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKR-KFAIGSAREADPALNVETEIEI 74
Query: 776 MKRIRHRNLVKIISACSNDDFKALIMEYMPNGSL------ENRLYSGTCMLDIFQRLNIM 829
+K++ H ++KI + +D+ +++E M G L RL TC L +Q L
Sbjct: 75 LKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML--- 130
Query: 830 IDVALALEYLHFGHSTPIIHY---------------MVAHISDFSIAKFLNGQDQLSMQT 874
LA++YL H IIH + I+DF +K L + S+
Sbjct: 131 ----LAVQYL---HENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMR 180
Query: 875 QTLATIGYMAPEYGVQGRVSTRG-----DVYSYGIMLMETFTGKKPTDE 918
T Y+APE V V T G D +S G++L +G P E
Sbjct: 181 TLCGTPTYLAPEVLVS--VGTAGYNRAVDCWSLGVILFICLSGYPPFSE 227
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 81/205 (39%), Gaps = 29/205 (14%)
Query: 734 LGIGSFGSV----YVARLQDGMEVAVKVFHQ---RYERALKSFQDECEVMKRIRHRNLVK 786
LG GSFG V + A + VAVK A+ F E M + HRNL++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 787 IISACSNDDFKALIMEYMPNGSLENRL--YSGTCMLDIFQRLNIMIDVALALEYLHFGHS 844
+ K ++ E P GSL +RL + G +L R + VA + YL S
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ--VAEGMGYLE---S 133
Query: 845 TPIIHYMVA------------HISDFSIAKFL-NGQDQLSMQTQTLATIGYMAPEYGVQG 891
IH +A I DF + + L D MQ + APE
Sbjct: 134 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 892 RVSTRGDVYSYGIMLMETFT-GKKP 915
S D + +G+ L E FT G++P
Sbjct: 194 TFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 55/201 (27%), Positives = 88/201 (43%), Gaps = 24/201 (11%)
Query: 733 LLGIGSFGSVY----VARLQDGMEVAVKVFHQRYERALKSFQDECE--VMKRIRHRNLVK 786
+LG GSFG V+ V R G A+KV + + + + E ++ + H +VK
Sbjct: 35 VLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVK 94
Query: 787 IISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTP 846
+ A + LI++++ G L RL S M + ++AL L++LH S
Sbjct: 95 LHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLAELALGLDHLH---SLG 150
Query: 847 IIHYMV----------AHI--SDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVS 894
II+ + HI +DF ++K D T+ YMAPE + S
Sbjct: 151 IIYRDLKPENILLDEEGHIKLTDFGLSK--EAIDHEKKAYSFCGTVEYMAPEVVNRQGHS 208
Query: 895 TRGDVYSYGIMLMETFTGKKP 915
D +SYG+++ E TG P
Sbjct: 209 HSADWWSYGVLMFEMLTGSLP 229
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 94/212 (44%), Gaps = 15/212 (7%)
Query: 726 DRFSKNNLLGIGSFGSVY-VARLQDGMEVAVKVFHQRYERALK-SFQDECEVMKRIRHRN 783
D F K + LG G+ G V+ V+ G+ +A K+ H + A++ E +V+
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 127
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLY-SGTCMLDIFQRLNIMIDVALALEYLHFG 842
+V A +D ++ ME+M GSL+ L +G I +++I V L YL
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK 185
Query: 843 HSTPIIHY-------MVAHISDFSIAKF-LNGQDQLSMQTQTLATIGYMAPEYGVQGRVS 894
H I+H +V + + F ++GQ SM + T YM+PE S
Sbjct: 186 HK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYS 243
Query: 895 TRGDVYSYGIMLMETFTGKKPTDEIFIGELSL 926
+ D++S G+ L+E G+ P EL L
Sbjct: 244 VQSDIWSMGLSLVEMAVGRYPIPPPDAKELEL 275
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 97/211 (45%), Gaps = 26/211 (12%)
Query: 732 NLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALK---SFQDECEVMKRIRHRNLVKI 787
+ LG+G+FG V V + + G +VAVK+ +++ R+L + E + +K RH +++K+
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 788 ISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPI 847
S ++MEY+ G L + + LD + + + ++Y H +
Sbjct: 82 YQVISTPSDIFMVMEYVSGGELFDYI-CKNGRLDEKESRRLFQQILSGVDYC---HRHMV 137
Query: 848 IH------------YMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVST 895
+H +M A I+DF ++ ++ + L + + Y APE + GR+
Sbjct: 138 VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRX---SCGSPNYAAPEV-ISGRLYA 193
Query: 896 --RGDVYSYGIMLMETFTGKKPTDEIFIGEL 924
D++S G++L G P D+ + L
Sbjct: 194 GPEVDIWSSGVILYALLCGTLPFDDDHVPTL 224
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 21/204 (10%)
Query: 726 DRFSKNNLLGIGSFGSVY-VARLQDGMEVAVKVFHQRYERALKSFQ---DECEVMKRIRH 781
D+F + LG GSFG V V ++ G A+K+ ++ LK + +E +++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH- 840
LVK+ + ++ ++MEY+P G + + L + R + L EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS 160
Query: 841 ----FGHSTP----IIHYMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQG 891
+ P I ++DF AK + G +T TL T Y+APE +
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWTLCGTPEYLAPEIILSK 214
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
+ D ++ G+++ E G P
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 21/204 (10%)
Query: 726 DRFSKNNLLGIGSFGSVY-VARLQDGMEVAVKVFHQRYERALKSFQ---DECEVMKRIRH 781
D+F + LG GSFG V V ++ G A+K+ ++ LK + +E +++ +
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH- 840
LVK+ + ++ ++MEY+P G + + L + R + L EYLH
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS 145
Query: 841 ----FGHSTP----IIHYMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQG 891
+ P I ++DF AK + G +T TL T Y+APE +
Sbjct: 146 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWTLCGTPEYLAPEIILSK 199
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
+ D ++ G+++ E G P
Sbjct: 200 GYNKAVDWWALGVLIYEMAAGYPP 223
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 90/208 (43%), Gaps = 25/208 (12%)
Query: 728 FSKNNLLGIGSFGSVYVA---RLQDGMEVAVKVFH-QRYERALKSFQDECEVMKRIRHRN 783
F+K +G GSFG V+ R Q VA+K+ + E ++ Q E V+ +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKV--VAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 81
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGH 843
+ K + D +IMEY+ GS + L G LD Q I+ ++ L+YLH
Sbjct: 82 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLH--- 136
Query: 844 STPIIHYMV------------AHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQG 891
S IH + ++DF +A L D + + T +MAPE Q
Sbjct: 137 SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNXFVGTPFWMAPEVIKQS 194
Query: 892 RVSTRGDVYSYGIMLMETFTGKKPTDEI 919
++ D++S GI +E G+ P E+
Sbjct: 195 AYDSKADIWSLGITAIELARGEPPHSEL 222
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 98/224 (43%), Gaps = 27/224 (12%)
Query: 719 HELLQATDRFSKNNLLGIGSFGSVYVARL--QDG--MEVAVKVFHQRY--ERALKSFQDE 772
++L +F+ +LG G FGSV A+L +DG ++VAVK+ ++ F E
Sbjct: 16 EDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLRE 75
Query: 773 CEVMKRIRHRNLVKIISACSNDDFKA------LIMEYMPNGSLE-----NRLYSGTCMLD 821
MK H ++ K++ K +I+ +M +G L +R+ L
Sbjct: 76 AACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLP 135
Query: 822 IFQRLNIMIDVALALEYL---HFGH------STPIIHYMVAHISDFSIAKFLNGQDQLSM 872
+ + M+D+A +EYL +F H + + M ++DF +++ + D
Sbjct: 136 LQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQ 195
Query: 873 QTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKP 915
+ + ++A E + DV+++G+ + E T G+ P
Sbjct: 196 GCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP 239
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 94/212 (44%), Gaps = 15/212 (7%)
Query: 726 DRFSKNNLLGIGSFGSVY-VARLQDGMEVAVKVFHQRYERALK-SFQDECEVMKRIRHRN 783
D F K + LG G+ G V+ V+ G+ +A K+ H + A++ E +V+
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLY-SGTCMLDIFQRLNIMIDVALALEYLHFG 842
+V A +D ++ ME+M GSL+ L +G I +++I V L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK 123
Query: 843 HSTPIIHY-------MVAHISDFSIAKF-LNGQDQLSMQTQTLATIGYMAPEYGVQGRVS 894
H I+H +V + + F ++GQ SM + T YM+PE S
Sbjct: 124 HK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYS 181
Query: 895 TRGDVYSYGIMLMETFTGKKPTDEIFIGELSL 926
+ D++S G+ L+E G+ P EL L
Sbjct: 182 VQSDIWSMGLSLVEMAVGRYPIPPPDAKELEL 213
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 94/212 (44%), Gaps = 15/212 (7%)
Query: 726 DRFSKNNLLGIGSFGSVY-VARLQDGMEVAVKVFHQRYERALK-SFQDECEVMKRIRHRN 783
D F K + LG G+ G V+ V+ G+ +A K+ H + A++ E +V+
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLY-SGTCMLDIFQRLNIMIDVALALEYLHFG 842
+V A +D ++ ME+M GSL+ L +G I +++I V L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK 123
Query: 843 HSTPIIHY-------MVAHISDFSIAKF-LNGQDQLSMQTQTLATIGYMAPEYGVQGRVS 894
H I+H +V + + F ++GQ SM + T YM+PE S
Sbjct: 124 HK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYS 181
Query: 895 TRGDVYSYGIMLMETFTGKKPTDEIFIGELSL 926
+ D++S G+ L+E G+ P EL L
Sbjct: 182 VQSDIWSMGLSLVEMAVGRYPIPPPDAKELEL 213
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 58/205 (28%), Positives = 81/205 (39%), Gaps = 29/205 (14%)
Query: 734 LGIGSFGSV----YVARLQDGMEVAVKVFHQ---RYERALKSFQDECEVMKRIRHRNLVK 786
LG GSFG V + A + VAVK A+ F E M + HRNL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 787 IISACSNDDFKALIMEYMPNGSLENRL--YSGTCMLDIFQRLNIMIDVALALEYLHFGHS 844
+ K ++ E P GSL +RL + G +L R + VA + YL S
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLE---S 129
Query: 845 TPIIHYMVA------------HISDFSIAKFL-NGQDQLSMQTQTLATIGYMAPEYGVQG 891
IH +A I DF + + L D MQ + APE
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTR 189
Query: 892 RVSTRGDVYSYGIMLMETFT-GKKP 915
S D + +G+ L E FT G++P
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 58/205 (28%), Positives = 81/205 (39%), Gaps = 29/205 (14%)
Query: 734 LGIGSFGSV----YVARLQDGMEVAVKVFHQ---RYERALKSFQDECEVMKRIRHRNLVK 786
LG GSFG V + A + VAVK A+ F E M + HRNL++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 787 IISACSNDDFKALIMEYMPNGSLENRL--YSGTCMLDIFQRLNIMIDVALALEYLHFGHS 844
+ K ++ E P GSL +RL + G +L R + VA + YL S
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLE---S 133
Query: 845 TPIIHYMVA------------HISDFSIAKFL-NGQDQLSMQTQTLATIGYMAPEYGVQG 891
IH +A I DF + + L D MQ + APE
Sbjct: 134 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 892 RVSTRGDVYSYGIMLMETFT-GKKP 915
S D + +G+ L E FT G++P
Sbjct: 194 TFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 58/205 (28%), Positives = 81/205 (39%), Gaps = 29/205 (14%)
Query: 734 LGIGSFGSV----YVARLQDGMEVAVKVFHQ---RYERALKSFQDECEVMKRIRHRNLVK 786
LG GSFG V + A + VAVK A+ F E M + HRNL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 787 IISACSNDDFKALIMEYMPNGSLENRL--YSGTCMLDIFQRLNIMIDVALALEYLHFGHS 844
+ K ++ E P GSL +RL + G +L R + VA + YL S
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLE---S 129
Query: 845 TPIIHYMVA------------HISDFSIAKFL-NGQDQLSMQTQTLATIGYMAPEYGVQG 891
IH +A I DF + + L D MQ + APE
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 892 RVSTRGDVYSYGIMLMETFT-GKKP 915
S D + +G+ L E FT G++P
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 58/205 (28%), Positives = 81/205 (39%), Gaps = 29/205 (14%)
Query: 734 LGIGSFGSV----YVARLQDGMEVAVKVFHQ---RYERALKSFQDECEVMKRIRHRNLVK 786
LG GSFG V + A + VAVK A+ F E M + HRNL++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 787 IISACSNDDFKALIMEYMPNGSLENRL--YSGTCMLDIFQRLNIMIDVALALEYLHFGHS 844
+ K ++ E P GSL +RL + G +L R + VA + YL S
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLE---S 139
Query: 845 TPIIHYMVA------------HISDFSIAKFL-NGQDQLSMQTQTLATIGYMAPEYGVQG 891
IH +A I DF + + L D MQ + APE
Sbjct: 140 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 199
Query: 892 RVSTRGDVYSYGIMLMETFT-GKKP 915
S D + +G+ L E FT G++P
Sbjct: 200 TFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 58/205 (28%), Positives = 81/205 (39%), Gaps = 29/205 (14%)
Query: 734 LGIGSFGSV----YVARLQDGMEVAVKVFHQ---RYERALKSFQDECEVMKRIRHRNLVK 786
LG GSFG V + A + VAVK A+ F E M + HRNL++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 787 IISACSNDDFKALIMEYMPNGSLENRL--YSGTCMLDIFQRLNIMIDVALALEYLHFGHS 844
+ K ++ E P GSL +RL + G +L R + VA + YL S
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLE---S 139
Query: 845 TPIIHYMVA------------HISDFSIAKFL-NGQDQLSMQTQTLATIGYMAPEYGVQG 891
IH +A I DF + + L D MQ + APE
Sbjct: 140 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTR 199
Query: 892 RVSTRGDVYSYGIMLMETFT-GKKP 915
S D + +G+ L E FT G++P
Sbjct: 200 TFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 112/272 (41%), Gaps = 67/272 (24%)
Query: 690 WKLIRCWKSITGSSNDGINSPQAIRRFSYHELLQATDRFSKNNL-----LGIGSFGSVYV 744
WK+I +S G+S I+ Q Y+E + F +NNL LG G+FG V
Sbjct: 1 WKII---ESYEGNSYTFIDPTQ----LPYNEKWE----FPRNNLQFGKTLGAGAFGKVVE 49
Query: 745 ARL-----QDG-MEVAVKVF----HQRYERALKSFQDECEVMKRI-RHRNLVKIISACSN 793
A +D ++VAVK+ H + AL S E ++M + +H N+V ++ AC++
Sbjct: 50 ATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS---ELKIMSHLGQHENIVNLLGACTH 106
Query: 794 DDFKALIMEYMPNGSLENRL-YSGTCM---------------------LDIFQRLNIMID 831
+I EY G L N L M L++ L+
Sbjct: 107 GGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQ 166
Query: 832 VALALEYLHFGHSTPIIHY------------MVAHISDFSIAKFLNGQDQLSMQTQTLAT 879
VA + +L S IH VA I DF +A+ + ++
Sbjct: 167 VAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 223
Query: 880 IGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT 911
+ +MAPE + + DV+SYGI+L E F+
Sbjct: 224 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 92/206 (44%), Gaps = 21/206 (10%)
Query: 728 FSKNNLLGIGSFGSVYVA---RLQDGMEVAVKVFH-QRYERALKSFQDECEVMKRIRHRN 783
F+K +G GSFG V+ R Q VA+K+ + E ++ Q E V+ +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQ--QVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSY 82
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGH 843
+ K + +IMEY+ GS + L +G D FQ ++ ++ L+YLH
Sbjct: 83 VTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGP--FDEFQIATMLKEILKGLDYLH--- 137
Query: 844 STPIIH-------YMVAHISDFSIAKF-LNGQ--DQLSMQTQTLATIGYMAPEYGVQGRV 893
S IH +++ D +A F + GQ D + + T +MAPE Q
Sbjct: 138 SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAY 197
Query: 894 STRGDVYSYGIMLMETFTGKKPTDEI 919
++ D++S GI +E G+ P ++
Sbjct: 198 DSKADIWSLGITAIELAKGEPPNSDM 223
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 58/205 (28%), Positives = 81/205 (39%), Gaps = 29/205 (14%)
Query: 734 LGIGSFGSV----YVARLQDGMEVAVKVFHQ---RYERALKSFQDECEVMKRIRHRNLVK 786
LG GSFG V + A + VAVK A+ F E M + HRNL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 787 IISACSNDDFKALIMEYMPNGSLENRL--YSGTCMLDIFQRLNIMIDVALALEYLHFGHS 844
+ K ++ E P GSL +RL + G +L R + VA + YL S
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLE---S 129
Query: 845 TPIIHYMVA------------HISDFSIAKFL-NGQDQLSMQTQTLATIGYMAPEYGVQG 891
IH +A I DF + + L D MQ + APE
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 892 RVSTRGDVYSYGIMLMETFT-GKKP 915
S D + +G+ L E FT G++P
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 94/212 (44%), Gaps = 15/212 (7%)
Query: 726 DRFSKNNLLGIGSFGSVY-VARLQDGMEVAVKVFHQRYERALK-SFQDECEVMKRIRHRN 783
D F K + LG G+ G V+ V+ G+ +A K+ H + A++ E +V+
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLY-SGTCMLDIFQRLNIMIDVALALEYLHFG 842
+V A +D ++ ME+M GSL+ L +G I +++I V L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK 123
Query: 843 HSTPIIHY-------MVAHISDFSIAKF-LNGQDQLSMQTQTLATIGYMAPEYGVQGRVS 894
H I+H +V + + F ++GQ SM + T YM+PE S
Sbjct: 124 HK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYS 181
Query: 895 TRGDVYSYGIMLMETFTGKKPTDEIFIGELSL 926
+ D++S G+ L+E G+ P EL L
Sbjct: 182 VQSDIWSMGLSLVEMAVGRYPIPPPDAKELEL 213
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 94/212 (44%), Gaps = 15/212 (7%)
Query: 726 DRFSKNNLLGIGSFGSVY-VARLQDGMEVAVKVFHQRYERALK-SFQDECEVMKRIRHRN 783
D F K + LG G+ G V+ V+ G+ +A K+ H + A++ E +V+
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLY-SGTCMLDIFQRLNIMIDVALALEYLHFG 842
+V A +D ++ ME+M GSL+ L +G I +++I V L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK 123
Query: 843 HSTPIIHY-------MVAHISDFSIAKF-LNGQDQLSMQTQTLATIGYMAPEYGVQGRVS 894
H I+H +V + + F ++GQ SM + T YM+PE S
Sbjct: 124 HK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYS 181
Query: 895 TRGDVYSYGIMLMETFTGKKPTDEIFIGELSL 926
+ D++S G+ L+E G+ P EL L
Sbjct: 182 VQSDIWSMGLSLVEMAVGRYPIPPPDAKELEL 213
>pdb|4FMZ|A Chain A, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
pdb|4FMZ|B Chain B, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
Length = 347
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 122/281 (43%), Gaps = 33/281 (11%)
Query: 333 LRNLEFLNIADNYLTSSTP---------------ELSFLSSLTNCQKIRVLILAGNPLDG 377
L NLE+LN+ N +T +P +++ +S+L N +R L L + +
Sbjct: 65 LTNLEYLNLNGNQITDISPLSNLVKLTNLYIGTNKITDISALQNLTNLRELYLNEDNISD 124
Query: 378 ILPSSIGNLSISLERFQMFNCRISGKIPQVISXXXXXXXXXXXXXXXXXSIPVTFSRLLN 437
I P + NL+ N +S P +S P+ + L +
Sbjct: 125 ISP--LANLTKXYSLNLGANHNLSDLSP--LSNXTGLNYLTVTESKVKDVTPI--ANLTD 178
Query: 438 LQGLGLAFNKLARSIPDEICHLAKLDKLILHGNKFSGAIPSCSGNLTSLRALYLGSNRFT 497
L L L +N++ P + L L + N+ + P N T L +L +G+N+ T
Sbjct: 179 LYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITPVA--NXTRLNSLKIGNNKIT 234
Query: 498 SALPSTIWNLKDILFFDVSSNSL-DGPLSLDIGNLKVVIELNLSRNNLSGDIPITIGGLK 556
P + NL + + ++ +N + D D+ LK LN+ N +S DI + + L
Sbjct: 235 DLSP--LANLSQLTWLEIGTNQISDINAVKDLTKLKX---LNVGSNQIS-DISV-LNNLS 287
Query: 557 NLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNKISGVIP 597
L LFL NN+L E GL++L L LS+N I+ + P
Sbjct: 288 QLNSLFLNNNQLGNEDXEVIGGLTNLTTLFLSQNHITDIRP 328
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 51/206 (24%), Positives = 97/206 (47%), Gaps = 27/206 (13%)
Query: 734 LGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACS 792
LG G+FG VY A+ ++ + A KV + E L+ + E +++ H N+VK++ A
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 793 NDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRL---NIMIDVALALEYLHFGHSTPIIH 849
++ +++E+ G+++ ML++ + L I + L+ L++ H IIH
Sbjct: 105 YENNLWILIEFCAGGAVD------AVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIH 158
Query: 850 -------YMVAHISDFSIAKF-LNGQDQLSMQTQT--LATIGYMAPEYGVQGRVST---- 895
+ D +A F ++ ++ ++Q + + T +MAPE V S
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEV-VMCETSKDRPY 217
Query: 896 --RGDVYSYGIMLMETFTGKKPTDEI 919
+ DV+S GI L+E + P E+
Sbjct: 218 DYKADVWSLGITLIEMAEIEPPHHEL 243
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 93/216 (43%), Gaps = 23/216 (10%)
Query: 726 DRFSKNNLLGIGSFGSVY-VARLQDGMEVAVKVFHQRYERALK-SFQDECEVMKRIRHRN 783
D F K + LG G+ G V+ V+ G+ +A K+ H + A++ E +V+
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLY-SGTCMLDIFQRLNIMIDVALALEYLHFG 842
+V A +D ++ ME+M GSL+ L +G I +++I V L YL
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK 150
Query: 843 HSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQ 890
H I+H V + DF ++ GQ SM + T YM+PE
Sbjct: 151 HK--IMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQG 204
Query: 891 GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSL 926
S + D++S G+ L+E G+ P EL L
Sbjct: 205 THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELEL 240
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 50.1 bits (118), Expect = 7e-06, Method: Composition-based stats.
Identities = 58/214 (27%), Positives = 92/214 (42%), Gaps = 25/214 (11%)
Query: 722 LQATDRFSKNNLLGIGSFGSVYVA---RLQDGMEVAVKVFH-QRYERALKSFQDECEVMK 777
L + F+K +G GSFG V+ R Q VA+K+ + E ++ Q E V+
Sbjct: 3 LDPEELFTKLEKIGKGSFGEVFKGIDNRTQK--VVAIKIIDLEEAEDEIEDIQQEITVLS 60
Query: 778 RIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALE 837
+ + K + D +IMEY+ GS + L G LD Q I+ ++ L+
Sbjct: 61 QCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLD 118
Query: 838 YLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLSMQTQTLATIGYMAP 885
YLH S IH + ++DF +A L D + + T +MAP
Sbjct: 119 YLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNXFVGTPFWMAP 173
Query: 886 EYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEI 919
E Q ++ D++S GI +E G+ P E+
Sbjct: 174 EVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 207
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 95/211 (45%), Gaps = 37/211 (17%)
Query: 728 FSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRYERALKSFQD---ECEVMKRIRHRN 783
FS +G GSFG+VY AR +++ VA+K +++ + +QD E ++++RH N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVAL----ALEYL 839
++ + L+MEY L S + +L++ ++ +++A AL+ L
Sbjct: 116 TIQYRGCYLREHTAWLVMEYC--------LGSASDLLEVHKKPLQEVEIAAVTHGALQGL 167
Query: 840 HFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEY 887
+ HS +IH V + DF A + + + T +MAPE
Sbjct: 168 AYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXF------VGTPYWMAPEV 221
Query: 888 GV---QGRVSTRGDVYSYGIMLMETFTGKKP 915
+ +G+ + DV+S GI +E K P
Sbjct: 222 ILAMDEGQYDGKVDVWSLGITCIELAERKPP 252
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 50.1 bits (118), Expect = 7e-06, Method: Composition-based stats.
Identities = 58/214 (27%), Positives = 92/214 (42%), Gaps = 25/214 (11%)
Query: 722 LQATDRFSKNNLLGIGSFGSVYVA---RLQDGMEVAVKVFH-QRYERALKSFQDECEVMK 777
L + F+K +G GSFG V+ R Q VA+K+ + E ++ Q E V+
Sbjct: 3 LDPEELFTKLEKIGKGSFGEVFKGIDNRTQK--VVAIKIIDLEEAEDEIEDIQQEITVLS 60
Query: 778 RIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALE 837
+ + K + D +IMEY+ GS + L G LD Q I+ ++ L+
Sbjct: 61 QCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLD 118
Query: 838 YLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLSMQTQTLATIGYMAP 885
YLH S IH + ++DF +A L D + + T +MAP
Sbjct: 119 YLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNTFVGTPFWMAP 173
Query: 886 EYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEI 919
E Q ++ D++S GI +E G+ P E+
Sbjct: 174 EVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 207
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 49.7 bits (117), Expect = 7e-06, Method: Composition-based stats.
Identities = 56/226 (24%), Positives = 98/226 (43%), Gaps = 30/226 (13%)
Query: 710 PQAIRRFSYHELLQATDRFSKNNLLGIGSFGSVYVARLQDGME-VAVKVFHQR-YERALK 767
P A+ + + D + ++LG G+F V +A + + VA+K ++ E
Sbjct: 2 PGAVEGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEG 61
Query: 768 SFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLD------ 821
S ++E V+ +I+H N+V + + LIM+ + G L +R+ +
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL 121
Query: 822 IFQRLNIMIDVALALEYLH-FG------HSTPIIHYMVAH-----ISDFSIAKFLNGQDQ 869
IFQ L+ A++YLH G +++Y + ISDF ++K +D
Sbjct: 122 IFQVLD-------AVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDP 171
Query: 870 LSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKP 915
S+ + T GY+APE Q S D +S G++ G P
Sbjct: 172 GSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 49.7 bits (117), Expect = 7e-06, Method: Composition-based stats.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 727 RFSKNNLLGIGSFGSVYVARLQDGMEV----AVKVFHQRYERALKSFQDECE--VMKRIR 780
+F +LG GSFG V++ + G + A+KV + + + + E ++ +
Sbjct: 26 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 85
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH 840
H +VK+ A + LI++++ G L RL S M + ++ALAL++LH
Sbjct: 86 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLAELALALDHLH 144
Query: 841 FGHSTPIIHYMV----------AHI--SDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYG 888
S II+ + HI +DF ++K D T+ YMAPE
Sbjct: 145 ---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEVV 199
Query: 889 VQGRVSTRGDVYSYGIMLMETFTGKKP 915
+ + D +S+G+++ E TG P
Sbjct: 200 NRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 49.7 bits (117), Expect = 7e-06, Method: Composition-based stats.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 727 RFSKNNLLGIGSFGSVYVARLQDGMEV----AVKVFHQRYERALKSFQDECE--VMKRIR 780
+F +LG GSFG V++ + G + A+KV + + + + E ++ +
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 84
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH 840
H +VK+ A + LI++++ G L RL S M + ++ALAL++LH
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLAELALALDHLH 143
Query: 841 FGHSTPIIHYMV----------AHI--SDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYG 888
S II+ + HI +DF ++K D T+ YMAPE
Sbjct: 144 ---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEVV 198
Query: 889 VQGRVSTRGDVYSYGIMLMETFTGKKP 915
+ + D +S+G+++ E TG P
Sbjct: 199 NRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 49.7 bits (117), Expect = 7e-06, Method: Composition-based stats.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 727 RFSKNNLLGIGSFGSVYVARLQDGMEV----AVKVFHQRYERALKSFQDECE--VMKRIR 780
+F +LG GSFG V++ + G + A+KV + + + + E ++ +
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 84
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH 840
H +VK+ A + LI++++ G L RL S M + ++ALAL++LH
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLAELALALDHLH 143
Query: 841 FGHSTPIIHYMV----------AHI--SDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYG 888
S II+ + HI +DF ++K D T+ YMAPE
Sbjct: 144 ---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEVV 198
Query: 889 VQGRVSTRGDVYSYGIMLMETFTGKKP 915
+ + D +S+G+++ E TG P
Sbjct: 199 NRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 92/219 (42%), Gaps = 27/219 (12%)
Query: 716 FSYHELLQATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERA---LKSFQD 771
F H +DR+ +LG GSFG V + + + G E AVKV +R + +S
Sbjct: 40 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR 99
Query: 772 ECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMID 831
E +++K++ H N++K+ + + L+ E G L + + S ++ I+
Sbjct: 100 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQ 158
Query: 832 VALALEYLHFGHSTPIIHYMVA---------------HISDFSIAKFLNGQDQLSMQTQT 876
V + Y+ H I+H + I DF ++ ++
Sbjct: 159 VLSGITYM---HKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMK---DK 212
Query: 877 LATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKP 915
+ T Y+APE + G + DV+S G++L +G P
Sbjct: 213 IGTAYYIAPEV-LHGTYDEKCDVWSTGVILYILLSGCPP 250
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 91/219 (41%), Gaps = 27/219 (12%)
Query: 716 FSYHELLQATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERA---LKSFQD 771
F H +DR+ +LG GSFG V + + + G E AVKV +R + +S
Sbjct: 16 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR 75
Query: 772 ECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMID 831
E +++K++ H N++K+ + + L+ E G L + + S F ++
Sbjct: 76 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR----FSEVDAARI 131
Query: 832 VALALEYLHFGHSTPIIHYMVA---------------HISDFSIAKFLNGQDQLSMQTQT 876
+ L + + H I+H + I DF ++ ++
Sbjct: 132 IRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMK---DK 188
Query: 877 LATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKP 915
+ T Y+APE + G + DV+S G++L +G P
Sbjct: 189 IGTAYYIAPEV-LHGTYDEKCDVWSTGVILYILLSGCPP 226
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 49.7 bits (117), Expect = 8e-06, Method: Composition-based stats.
Identities = 51/206 (24%), Positives = 96/206 (46%), Gaps = 27/206 (13%)
Query: 734 LGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACS 792
LG G+FG VY A+ ++ + A KV + E L+ + E +++ H N+VK++ A
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 793 NDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRL---NIMIDVALALEYLHFGHSTPIIH 849
++ +++E+ G+++ ML++ + L I + L+ L++ H IIH
Sbjct: 105 YENNLWILIEFCAGGAVD------AVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIH 158
Query: 850 -------YMVAHISDFSIAKF-LNGQDQLSMQTQT--LATIGYMAPEYGVQGRVST---- 895
+ D +A F ++ ++ +Q + + T +MAPE V S
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEV-VMCETSKDRPY 217
Query: 896 --RGDVYSYGIMLMETFTGKKPTDEI 919
+ DV+S GI L+E + P E+
Sbjct: 218 DYKADVWSLGITLIEMAEIEPPHHEL 243
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 49.7 bits (117), Expect = 8e-06, Method: Composition-based stats.
Identities = 51/206 (24%), Positives = 96/206 (46%), Gaps = 27/206 (13%)
Query: 734 LGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACS 792
LG G+FG VY A+ ++ + A KV + E L+ + E +++ H N+VK++ A
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 793 NDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRL---NIMIDVALALEYLHFGHSTPIIH 849
++ +++E+ G+++ ML++ + L I + L+ L++ H IIH
Sbjct: 105 YENNLWILIEFCAGGAVD------AVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIH 158
Query: 850 -------YMVAHISDFSIAKF-LNGQDQLSMQTQT--LATIGYMAPEYGVQGRVST---- 895
+ D +A F ++ ++ +Q + + T +MAPE V S
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEV-VMCETSKDRPY 217
Query: 896 --RGDVYSYGIMLMETFTGKKPTDEI 919
+ DV+S GI L+E + P E+
Sbjct: 218 DYKADVWSLGITLIEMAEIEPPHHEL 243
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 88/204 (43%), Gaps = 21/204 (10%)
Query: 726 DRFSKNNLLGIGSFGSVY-VARLQDGMEVAVKVFHQRYERALKSFQ---DECEVMKRIRH 781
D+F + LG GSFG V V ++ G A+K+ ++ LK + +E +++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH- 840
LVK+ + ++ ++MEY+P G + + L + R + L EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHS 160
Query: 841 ----FGHSTP----IIHYMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQG 891
+ P I ++DF AK + G +T L T Y+APE +
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEIILSK 214
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
+ D ++ G+++ E G P
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 49.7 bits (117), Expect = 8e-06, Method: Composition-based stats.
Identities = 50/198 (25%), Positives = 95/198 (47%), Gaps = 18/198 (9%)
Query: 734 LGIGSFGSV----YVARLQDGMEVAVKVFHQRYERALK-SFQDECEVMKRIRHRNLVKII 788
LG G+FG+V Y + + ++ + ALK E VM+++ + +V++I
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 789 SACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYL---HFGH-- 843
C + + L+ME G L L + D + ++ V++ ++YL +F H
Sbjct: 79 GICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLEESNFVHRD 136
Query: 844 ----STPIIHYMVAHISDFSIAKFLNG-QDQLSMQTQTLATIGYMAPEYGVQGRVSTRGD 898
+ ++ A ISDF ++K L ++ QT + + APE + S++ D
Sbjct: 137 LAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFSSKSD 196
Query: 899 VYSYGIMLMETFT-GKKP 915
V+S+G+++ E F+ G+KP
Sbjct: 197 VWSFGVLMWEAFSYGQKP 214
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 91/219 (41%), Gaps = 27/219 (12%)
Query: 716 FSYHELLQATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERA---LKSFQD 771
F H +DR+ +LG GSFG V + + + G E AVKV +R + +S
Sbjct: 39 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR 98
Query: 772 ECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMID 831
E +++K++ H N++K+ + + L+ E G L + + S F ++
Sbjct: 99 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR----FSEVDAARI 154
Query: 832 VALALEYLHFGHSTPIIHYMVA---------------HISDFSIAKFLNGQDQLSMQTQT 876
+ L + + H I+H + I DF ++ ++
Sbjct: 155 IRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMK---DK 211
Query: 877 LATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKP 915
+ T Y+APE + G + DV+S G++L +G P
Sbjct: 212 IGTAYYIAPEV-LHGTYDEKCDVWSTGVILYILLSGCPP 249
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 116/284 (40%), Gaps = 79/284 (27%)
Query: 671 IALPLSTAALIIVVTLTLKWKLIRCWKSITGSSNDGINSPQAIRRFSYHELLQATDRFSK 730
IAL LS + + LT+ +D P+A+R D +
Sbjct: 120 IALSLSRNKVFVFFDLTV---------------DDQSVYPKALR-----------DEYIM 153
Query: 731 NNLLGIGSFGSVYVA-RLQDGMEVAVKVFHQRYERALKSFQD---------ECEVMKRIR 780
+ LG G+ G V +A + +VA+++ +R + A+ S ++ E E++K++
Sbjct: 154 SKTLGSGACGEVKLAFERKTCKKVAIRIISKR-KFAIGSAREADPALNVETEIEILKKLN 212
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSL------ENRLYSGTCMLDIFQRLNIMIDVAL 834
H ++KI + +D+ +++E M G L RL TC L +Q L L
Sbjct: 213 HPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML-------L 264
Query: 835 ALEYLHFGHSTPIIHY---------------MVAHISDFSIAKFLNGQDQLSMQTQTLAT 879
A++YL H IIH + I+DF +K L + S+ T
Sbjct: 265 AVQYL---HENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRTLCGT 318
Query: 880 IGYMAPEYGVQGRVSTRG-----DVYSYGIMLMETFTGKKPTDE 918
Y+APE V V T G D +S G++L +G P E
Sbjct: 319 PTYLAPEVLVS--VGTAGYNRAVDCWSLGVILFICLSGYPPFSE 360
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 772 ECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMID 831
E VM+++ + +V++I C + + L+ME G L L + D + ++
Sbjct: 420 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQ 477
Query: 832 VALALEYLH---FGH------STPIIHYMVAHISDFSIAKFLNG-QDQLSMQTQTLATIG 881
V++ ++YL F H + ++ A ISDF ++K L ++ QT +
Sbjct: 478 VSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 537
Query: 882 YMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKP 915
+ APE + S++ DV+S+G+++ E F+ G+KP
Sbjct: 538 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 572
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 88/204 (43%), Gaps = 21/204 (10%)
Query: 726 DRFSKNNLLGIGSFGSVY-VARLQDGMEVAVKVFHQRYERALKSFQ---DECEVMKRIRH 781
D+F + LG GSFG V V ++ G A+K+ ++ LK + +E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH- 840
LVK+ + ++ ++MEY+P G + + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHS 159
Query: 841 ----FGHSTP----IIHYMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQG 891
+ P I ++DF AK + G +T L T Y+APE +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEIILSK 213
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
+ D ++ G+++ E G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 88/204 (43%), Gaps = 21/204 (10%)
Query: 726 DRFSKNNLLGIGSFGSVY-VARLQDGMEVAVKVFHQRYERALKSFQ---DECEVMKRIRH 781
D+F + LG GSFG V V ++ G A+K+ ++ LK + +E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH- 840
LVK+ + ++ ++MEY+P G + + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHS 159
Query: 841 ----FGHSTP----IIHYMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQG 891
+ P I ++DF AK + G +T L T Y+APE +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEIILSK 213
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
+ D ++ G+++ E G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 116/284 (40%), Gaps = 79/284 (27%)
Query: 671 IALPLSTAALIIVVTLTLKWKLIRCWKSITGSSNDGINSPQAIRRFSYHELLQATDRFSK 730
IAL LS + + LT+ +D P+A+R D +
Sbjct: 106 IALSLSRNKVFVFFDLTV---------------DDQSVYPKALR-----------DEYIM 139
Query: 731 NNLLGIGSFGSVYVA-RLQDGMEVAVKVFHQRYERALKSFQD---------ECEVMKRIR 780
+ LG G+ G V +A + +VA+++ +R + A+ S ++ E E++K++
Sbjct: 140 SKTLGSGACGEVKLAFERKTCKKVAIRIISKR-KFAIGSAREADPALNVETEIEILKKLN 198
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSL------ENRLYSGTCMLDIFQRLNIMIDVAL 834
H ++KI + +D+ +++E M G L RL TC L +Q L L
Sbjct: 199 HPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML-------L 250
Query: 835 ALEYLHFGHSTPIIHY---------------MVAHISDFSIAKFLNGQDQLSMQTQTLAT 879
A++YL H IIH + I+DF +K L + S+ T
Sbjct: 251 AVQYL---HENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRTLCGT 304
Query: 880 IGYMAPEYGVQGRVSTRG-----DVYSYGIMLMETFTGKKPTDE 918
Y+APE V V T G D +S G++L +G P E
Sbjct: 305 PTYLAPEVLVS--VGTAGYNRAVDCWSLGVILFICLSGYPPFSE 346
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 88/204 (43%), Gaps = 21/204 (10%)
Query: 726 DRFSKNNLLGIGSFGSVY-VARLQDGMEVAVKVFHQRYERALKSFQ---DECEVMKRIRH 781
D+F + +G GSFG V V ++ G A+K+ ++ LK + +E +++ +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH- 840
LVK+ + ++ ++MEYMP G + + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS 159
Query: 841 ----FGHSTP----IIHYMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQG 891
+ P I ++DF AK + G +T L T Y+APE +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG------RTWXLCGTPEYLAPEIILSK 213
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
+ D ++ G+++ E G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 50/198 (25%), Positives = 95/198 (47%), Gaps = 18/198 (9%)
Query: 734 LGIGSFGSV----YVARLQDGMEVAVKVFHQRYERALK-SFQDECEVMKRIRHRNLVKII 788
LG G+FG+V Y + + ++ + ALK E VM+++ + +V++I
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 789 SACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYL---HFGH-- 843
C + + L+ME G L L + D + ++ V++ ++YL +F H
Sbjct: 85 GICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLEESNFVHRD 142
Query: 844 ----STPIIHYMVAHISDFSIAKFLNG-QDQLSMQTQTLATIGYMAPEYGVQGRVSTRGD 898
+ ++ A ISDF ++K L ++ QT + + APE + S++ D
Sbjct: 143 LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSD 202
Query: 899 VYSYGIMLMETFT-GKKP 915
V+S+G+++ E F+ G+KP
Sbjct: 203 VWSFGVLMWEAFSYGQKP 220
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 772 ECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMID 831
E VM+++ + +V++I C + + L+ME G L L + D + ++
Sbjct: 421 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQ 478
Query: 832 VALALEYLH---FGH------STPIIHYMVAHISDFSIAKFLNG-QDQLSMQTQTLATIG 881
V++ ++YL F H + ++ A ISDF ++K L ++ QT +
Sbjct: 479 VSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 538
Query: 882 YMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKP 915
+ APE + S++ DV+S+G+++ E F+ G+KP
Sbjct: 539 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 573
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 50/198 (25%), Positives = 95/198 (47%), Gaps = 18/198 (9%)
Query: 734 LGIGSFGSV----YVARLQDGMEVAVKVFHQRYERALK-SFQDECEVMKRIRHRNLVKII 788
LG G+FG+V Y + + ++ + ALK E VM+++ + +V++I
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 789 SACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYL---HFGH-- 843
C + + L+ME G L L + D + ++ V++ ++YL +F H
Sbjct: 73 GICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLEESNFVHRD 130
Query: 844 ----STPIIHYMVAHISDFSIAKFLNG-QDQLSMQTQTLATIGYMAPEYGVQGRVSTRGD 898
+ ++ A ISDF ++K L ++ QT + + APE + S++ D
Sbjct: 131 LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSD 190
Query: 899 VYSYGIMLMETFT-GKKP 915
V+S+G+++ E F+ G+KP
Sbjct: 191 VWSFGVLMWEAFSYGQKP 208
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 50/198 (25%), Positives = 95/198 (47%), Gaps = 18/198 (9%)
Query: 734 LGIGSFGSV----YVARLQDGMEVAVKVFHQRYERALK-SFQDECEVMKRIRHRNLVKII 788
LG G+FG+V Y + + ++ + ALK E VM+++ + +V++I
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 789 SACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYL---HFGH-- 843
C + + L+ME G L L + D + ++ V++ ++YL +F H
Sbjct: 95 GICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLEESNFVHRD 152
Query: 844 ----STPIIHYMVAHISDFSIAKFLNG-QDQLSMQTQTLATIGYMAPEYGVQGRVSTRGD 898
+ ++ A ISDF ++K L ++ QT + + APE + S++ D
Sbjct: 153 LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSD 212
Query: 899 VYSYGIMLMETFT-GKKP 915
V+S+G+++ E F+ G+KP
Sbjct: 213 VWSFGVLMWEAFSYGQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 50/198 (25%), Positives = 95/198 (47%), Gaps = 18/198 (9%)
Query: 734 LGIGSFGSV----YVARLQDGMEVAVKVFHQRYERALK-SFQDECEVMKRIRHRNLVKII 788
LG G+FG+V Y + + ++ + ALK E VM+++ + +V++I
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 789 SACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYL---HFGH-- 843
C + + L+ME G L L + D + ++ V++ ++YL +F H
Sbjct: 95 GICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLEESNFVHRD 152
Query: 844 ----STPIIHYMVAHISDFSIAKFLNG-QDQLSMQTQTLATIGYMAPEYGVQGRVSTRGD 898
+ ++ A ISDF ++K L ++ QT + + APE + S++ D
Sbjct: 153 LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSD 212
Query: 899 VYSYGIMLMETFT-GKKP 915
V+S+G+++ E F+ G+KP
Sbjct: 213 VWSFGVLMWEAFSYGQKP 230
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 88/204 (43%), Gaps = 21/204 (10%)
Query: 726 DRFSKNNLLGIGSFGSVY-VARLQDGMEVAVKVFHQRYERALKSFQ---DECEVMKRIRH 781
D+F + +G GSFG V V ++ G A+K+ ++ LK + +E +++ +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH- 840
LVK+ + ++ ++MEYMP G + + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS 159
Query: 841 ----FGHSTP----IIHYMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQG 891
+ P I ++DF AK + G +T L T Y+APE +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG------RTWXLCGTPEYLAPEIILSK 213
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
+ D ++ G+++ E G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 50/198 (25%), Positives = 95/198 (47%), Gaps = 18/198 (9%)
Query: 734 LGIGSFGSV----YVARLQDGMEVAVKVFHQRYERALK-SFQDECEVMKRIRHRNLVKII 788
LG G+FG+V Y + + ++ + ALK E VM+++ + +V++I
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 789 SACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYL---HFGH-- 843
C + + L+ME G L L + D + ++ V++ ++YL +F H
Sbjct: 93 GICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLEESNFVHRD 150
Query: 844 ----STPIIHYMVAHISDFSIAKFLNG-QDQLSMQTQTLATIGYMAPEYGVQGRVSTRGD 898
+ ++ A ISDF ++K L ++ QT + + APE + S++ D
Sbjct: 151 LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSD 210
Query: 899 VYSYGIMLMETFT-GKKP 915
V+S+G+++ E F+ G+KP
Sbjct: 211 VWSFGVLMWEAFSYGQKP 228
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 50/198 (25%), Positives = 95/198 (47%), Gaps = 18/198 (9%)
Query: 734 LGIGSFGSV----YVARLQDGMEVAVKVFHQRYERALK-SFQDECEVMKRIRHRNLVKII 788
LG G+FG+V Y + + ++ + ALK E VM+++ + +V++I
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 789 SACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYL---HFGH-- 843
C + + L+ME G L L + D + ++ V++ ++YL +F H
Sbjct: 75 GICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLEESNFVHRD 132
Query: 844 ----STPIIHYMVAHISDFSIAKFLNG-QDQLSMQTQTLATIGYMAPEYGVQGRVSTRGD 898
+ ++ A ISDF ++K L ++ QT + + APE + S++ D
Sbjct: 133 LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSD 192
Query: 899 VYSYGIMLMETFT-GKKP 915
V+S+G+++ E F+ G+KP
Sbjct: 193 VWSFGVLMWEAFSYGQKP 210
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 50/198 (25%), Positives = 95/198 (47%), Gaps = 18/198 (9%)
Query: 734 LGIGSFGSV----YVARLQDGMEVAVKVFHQRYERALK-SFQDECEVMKRIRHRNLVKII 788
LG G+FG+V Y + + ++ + ALK E VM+++ + +V++I
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 789 SACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYL---HFGH-- 843
C + + L+ME G L L + D + ++ V++ ++YL +F H
Sbjct: 79 GICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLEESNFVHRD 136
Query: 844 ----STPIIHYMVAHISDFSIAKFLNG-QDQLSMQTQTLATIGYMAPEYGVQGRVSTRGD 898
+ ++ A ISDF ++K L ++ QT + + APE + S++ D
Sbjct: 137 LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSD 196
Query: 899 VYSYGIMLMETFT-GKKP 915
V+S+G+++ E F+ G+KP
Sbjct: 197 VWSFGVLMWEAFSYGQKP 214
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 88/204 (43%), Gaps = 21/204 (10%)
Query: 726 DRFSKNNLLGIGSFGSVY-VARLQDGMEVAVKVFHQRYERALKSFQ---DECEVMKRIRH 781
D+F + LG GSFG V V ++ G A+K+ ++ LK + +E +++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH- 840
LVK+ + ++ ++MEY+P G + + L + R + L EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS 160
Query: 841 ----FGHSTP----IIHYMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQG 891
+ P I ++DF AK + G +T L T Y+APE +
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEIILSK 214
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
+ D ++ G+++ E G P
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 88/204 (43%), Gaps = 21/204 (10%)
Query: 726 DRFSKNNLLGIGSFGSVY-VARLQDGMEVAVKVFHQRYERALKSFQ---DECEVMKRIRH 781
D+F + LG GSFG V V ++ G A+K+ ++ LK + +E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH- 840
LVK+ + ++ ++MEY+P G + + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS 159
Query: 841 ----FGHSTP----IIHYMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQG 891
+ P I ++DF AK + G +T L T Y+APE +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEIILSK 213
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
+ D ++ G+++ E G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 732 NLLGIGSFGSVYVARLQDGMEVAVKV--FHQRYERALKSFQDECEVMKRIRHRNLVKIIS 789
L+G G FG VY R EVA+++ + E LK+F+ E ++ RH N+V +
Sbjct: 39 ELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMG 96
Query: 790 ACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH 840
AC + A+I +L + + +LD+ + I ++ + YLH
Sbjct: 97 ACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH 147
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 88/204 (43%), Gaps = 21/204 (10%)
Query: 726 DRFSKNNLLGIGSFGSVY-VARLQDGMEVAVKVFHQRYERALKSFQ---DECEVMKRIRH 781
D+F + LG GSFG V V ++ G A+K+ ++ LK + +E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH- 840
LVK+ + ++ ++MEY+P G + + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS 159
Query: 841 ----FGHSTP----IIHYMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQG 891
+ P I ++DF AK + G +T L T Y+APE +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEIILSK 213
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
+ D ++ G+++ E G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 54/210 (25%), Positives = 93/210 (44%), Gaps = 30/210 (14%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQDGME-VAVK-VFHQRYERALKSFQDECEVMKRIRHRN 783
D + ++LG G+F V +A + + VA+K + + E S ++E V+ +I+H N
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN 77
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLD------IFQRLNIMIDVALALE 837
+V + + LIM+ + G L +R+ + IFQ L+ A++
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD-------AVK 130
Query: 838 YLH-FG------HSTPIIHYMVAH-----ISDFSIAKFLNGQDQLSMQTQTLATIGYMAP 885
YLH G +++Y + ISDF ++K +D S+ + T GY+AP
Sbjct: 131 YLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAP 187
Query: 886 EYGVQGRVSTRGDVYSYGIMLMETFTGKKP 915
E Q S D +S G++ G P
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 54/210 (25%), Positives = 93/210 (44%), Gaps = 30/210 (14%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQDGME-VAVK-VFHQRYERALKSFQDECEVMKRIRHRN 783
D + ++LG G+F V +A + + VA+K + + E S ++E V+ +I+H N
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN 77
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLD------IFQRLNIMIDVALALE 837
+V + + LIM+ + G L +R+ + IFQ L+ A++
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD-------AVK 130
Query: 838 YLH-FG------HSTPIIHYMVAH-----ISDFSIAKFLNGQDQLSMQTQTLATIGYMAP 885
YLH G +++Y + ISDF ++K +D S+ + T GY+AP
Sbjct: 131 YLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAP 187
Query: 886 EYGVQGRVSTRGDVYSYGIMLMETFTGKKP 915
E Q S D +S G++ G P
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 54/210 (25%), Positives = 93/210 (44%), Gaps = 30/210 (14%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQDGME-VAVK-VFHQRYERALKSFQDECEVMKRIRHRN 783
D + ++LG G+F V +A + + VA+K + + E S ++E V+ +I+H N
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN 77
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLD------IFQRLNIMIDVALALE 837
+V + + LIM+ + G L +R+ + IFQ L+ A++
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD-------AVK 130
Query: 838 YLH-FG------HSTPIIHYMVAH-----ISDFSIAKFLNGQDQLSMQTQTLATIGYMAP 885
YLH G +++Y + ISDF ++K +D S+ + T GY+AP
Sbjct: 131 YLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAP 187
Query: 886 EYGVQGRVSTRGDVYSYGIMLMETFTGKKP 915
E Q S D +S G++ G P
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 88/204 (43%), Gaps = 21/204 (10%)
Query: 726 DRFSKNNLLGIGSFGSVY-VARLQDGMEVAVKVFHQRYERALKSFQ---DECEVMKRIRH 781
D+F + LG GSFG V V ++ G A+K+ ++ LK + +E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH- 840
LVK+ + ++ ++MEY+P G + + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS 159
Query: 841 ----FGHSTP----IIHYMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQG 891
+ P I ++DF AK + G +T L T Y+APE +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEIILSK 213
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
+ D ++ G+++ E G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 88/204 (43%), Gaps = 21/204 (10%)
Query: 726 DRFSKNNLLGIGSFGSVY-VARLQDGMEVAVKVFHQRYERALKSFQ---DECEVMKRIRH 781
D+F + LG GSFG V V ++ G A+K+ ++ LK + +E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH- 840
LVK+ + ++ ++MEY P G + + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS 159
Query: 841 ----FGHSTP----IIHYMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQG 891
+ P I ++DF +AK + G +T L T Y+APE +
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKG------RTWXLCGTPEYLAPEIILSK 213
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
+ D ++ G+++ E G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 21/204 (10%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQ---DECEVMKRIRH 781
D+F + LG GSFG V + + ++ G A+K+ ++ LK + +E +++ +
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH- 840
LVK+ + ++ ++MEY+P G + + L + R + L EYLH
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHS 152
Query: 841 ----FGHSTP----IIHYMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQG 891
+ P I ++DF AK + G +T L T Y+APE +
Sbjct: 153 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEIILSK 206
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
+ D ++ G+++ E G P
Sbjct: 207 GYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 118/295 (40%), Gaps = 29/295 (9%)
Query: 734 LGIGSFGSVYVA--RLQDGMEVAVKVFH-QRYERALKSFQDECEVMKRIRHRNLVKIISA 790
LG G++G V +A R+ + VAVK+ +R ++ + E + K + H N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 791 CSNDDFKALIMEYMPNGSLENRLYSGTCMLDI-FQRL--NIMIDVALALEYLHFGHSTPI 847
+ + L +EY G L +R+ M + QR +M V YLH I
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH---GIGI 126
Query: 848 IHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVST 895
H + ISDF +A ++ + + T+ Y+APE +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 896 RG-DVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYF 954
DV+S GI+L G+ P D+ S W ++ + ID+ L+ +
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKIL 246
Query: 955 AAKEQSLLSILNLATECTIESPGKRINAREIVT--GLLKIRDTLVKSVGMNTSFS 1007
+ ++I ++ + P K+ R VT G+ + K + N FS
Sbjct: 247 VENPSARITIPDIKKDRWYNKPLKKGAKRPRVTSGGVSESPSGFSKHIQSNLDFS 301
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 89/219 (40%), Gaps = 27/219 (12%)
Query: 716 FSYHELLQATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERA---LKSFQD 771
F H +DR+ +LG GSFG V + + + G E AVKV +R + +S
Sbjct: 16 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR 75
Query: 772 ECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMID 831
E +++K++ H N+ K+ + + L+ E G L + + S F ++
Sbjct: 76 EVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR----FSEVDAARI 131
Query: 832 VALALEYLHFGHSTPIIHYMVA---------------HISDFSIAKFLNGQDQLSMQTQT 876
+ L + + H I+H + I DF ++ +
Sbjct: 132 IRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXK---DK 188
Query: 877 LATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKP 915
+ T Y+APE + G + DV+S G++L +G P
Sbjct: 189 IGTAYYIAPEV-LHGTYDEKCDVWSTGVILYILLSGCPP 226
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 25/208 (12%)
Query: 734 LGIGSFGSVYVAR-LQDGMEVAVKVFH--QRYERALKSFQDECEVMKRIRHRNLVKIISA 790
+G G+F V +AR + G EVAVK+ Q +L+ E +MK + H N+VK+
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 791 CSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHY 850
+ L+MEY G + + L + M + R + A++Y H I+H
Sbjct: 75 IETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR-QIVSAVQYC---HQKFIVHR 130
Query: 851 ------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRV--STR 896
M I+DF + ++L + Y APE QG+
Sbjct: 131 DLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPEL-FQGKKYDGPE 186
Query: 897 GDVYSYGIMLMETFTGKKPTDEIFIGEL 924
DV+S G++L +G P D + EL
Sbjct: 187 VDVWSLGVILYTLVSGSLPFDGQNLKEL 214
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 57/236 (24%), Positives = 98/236 (41%), Gaps = 51/236 (21%)
Query: 728 FSKNNL-----LGIGSFGSVYVA-----RLQDG-MEVAVKVFHQRYERA-LKSFQDECEV 775
F + NL LG G FG V A + + G VAVK+ + + L+ E V
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNV 79
Query: 776 MKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCM---------------- 819
+K++ H +++K+ ACS D LI+EY GSL L +
Sbjct: 80 LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 820 -------LDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSI 860
L + ++ ++ ++YL ++H +A ISDF +
Sbjct: 140 DHPDERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGL 196
Query: 861 AKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKP 915
++ + +D ++Q + +MA E +T+ DV+S+G++L E T G P
Sbjct: 197 SRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP 252
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 26/199 (13%)
Query: 734 LGIGSFGSVYV-----ARLQDGMEVAVKVFHQRYERALKS-FQDECEVMKRIRHRNLVKI 787
LG G FG V + G VAVK +S ++ E ++++ + H +++K
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 788 ISACSNDDFKAL--IMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHST 845
C + K+L +MEY+P GSL + L + + + Q L + + YLH H
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLHAQH-- 137
Query: 846 PIIHYMVA------------HISDFSIAKFL-NGQDQLSMQTQTLATIGYMAPEYGVQGR 892
IH +A I DF +AK + G + ++ + + + APE + +
Sbjct: 138 -YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYK 196
Query: 893 VSTRGDVYSYGIMLMETFT 911
DV+S+G+ L E T
Sbjct: 197 FYYASDVWSFGVTLYELLT 215
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 57/236 (24%), Positives = 98/236 (41%), Gaps = 51/236 (21%)
Query: 728 FSKNNL-----LGIGSFGSVYVA-----RLQDG-MEVAVKVFHQRYERA-LKSFQDECEV 775
F + NL LG G FG V A + + G VAVK+ + + L+ E V
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNV 79
Query: 776 MKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCM---------------- 819
+K++ H +++K+ ACS D LI+EY GSL L +
Sbjct: 80 LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 820 -------LDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSI 860
L + ++ ++ ++YL ++H +A ISDF +
Sbjct: 140 DHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGL 196
Query: 861 AKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKP 915
++ + +D ++Q + +MA E +T+ DV+S+G++L E T G P
Sbjct: 197 SRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP 252
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 57/236 (24%), Positives = 98/236 (41%), Gaps = 51/236 (21%)
Query: 728 FSKNNL-----LGIGSFGSVYVA-----RLQDG-MEVAVKVFHQRYERA-LKSFQDECEV 775
F + NL LG G FG V A + + G VAVK+ + + L+ E V
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNV 79
Query: 776 MKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCM---------------- 819
+K++ H +++K+ ACS D LI+EY GSL L +
Sbjct: 80 LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 820 -------LDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSI 860
L + ++ ++ ++YL ++H +A ISDF +
Sbjct: 140 DHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGL 196
Query: 861 AKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKP 915
++ + +D ++Q + +MA E +T+ DV+S+G++L E T G P
Sbjct: 197 SRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP 252
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 26/199 (13%)
Query: 734 LGIGSFGSVYV-----ARLQDGMEVAVKVFHQRYERALKS-FQDECEVMKRIRHRNLVKI 787
LG G FG V + G VAVK +S ++ E ++++ + H +++K
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 788 ISACSNDDFKAL--IMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHST 845
C + K+L +MEY+P GSL + L + + + Q L + + YLH H
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLHSQH-- 137
Query: 846 PIIHYMVA------------HISDFSIAKFL-NGQDQLSMQTQTLATIGYMAPEYGVQGR 892
IH +A I DF +AK + G + ++ + + + APE + +
Sbjct: 138 -YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYK 196
Query: 893 VSTRGDVYSYGIMLMETFT 911
DV+S+G+ L E T
Sbjct: 197 FYYASDVWSFGVTLYELLT 215
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 21/204 (10%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQ---DECEVMKRIRH 781
D+F + LG GSFG V + + ++ G A+K+ ++ LK + +E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH- 840
LVK+ + ++ ++MEY+P G + + L + R + L EYLH
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS 159
Query: 841 ----FGHSTP----IIHYMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQG 891
+ P I ++DF AK + G +T L T Y+APE +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEIILSK 213
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
+ D ++ G+++ E G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 87/204 (42%), Gaps = 21/204 (10%)
Query: 726 DRFSKNNLLGIGSFGSVY-VARLQDGMEVAVKVFHQRYERALKSFQ---DECEVMKRIRH 781
D+F + LG GSFG V V ++ G A+K+ ++ LK + +E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH- 840
LVK+ + ++ ++MEY P G + + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHS 159
Query: 841 ----FGHSTP----IIHYMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQG 891
+ P I ++DF AK + G +T L T Y+APE +
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG------RTWXLCGTPEYLAPEIILSK 213
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
+ D ++ G+++ E G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 24/203 (11%)
Query: 732 NLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISA 790
+LG G+F V++ + + G A+K + S ++E V+K+I+H N+V +
Sbjct: 15 EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDI 74
Query: 791 CSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIH- 849
+ L+M+ + G L +R+ + L ++ V A++YL H I+H
Sbjct: 75 YESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL-VIQQVLSAVKYL---HENGIVHR 130
Query: 850 --------YMVAH------ISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVST 895
Y+ I+DF ++K +Q + + T GY+APE Q S
Sbjct: 131 DLKPENLLYLTPEENSKIMITDFGLSKM----EQNGIMSTACGTPGYVAPEVLAQKPYSK 186
Query: 896 RGDVYSYGIMLMETFTGKKPTDE 918
D +S G++ G P E
Sbjct: 187 AVDCWSIGVITYILLCGYPPFYE 209
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 88/204 (43%), Gaps = 21/204 (10%)
Query: 726 DRFSKNNLLGIGSFGSVY-VARLQDGMEVAVKVFHQRYERALKSFQ---DECEVMKRIRH 781
D+F + LG GSFG V V ++ G A+K+ ++ LK + +E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH- 840
LVK+ + ++ ++MEY P G + + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS 159
Query: 841 ----FGHSTP----IIHYMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQG 891
+ P I ++DF +AK + G +T L T Y+APE +
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKG------RTWXLCGTPEYLAPEIILSK 213
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
+ D ++ G+++ E G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 97/233 (41%), Gaps = 53/233 (22%)
Query: 732 NLLGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKR--IRHRNLVKIIS 789
L+G G +G+VY L D VAVKVF ++F +E + + + H N+ + I
Sbjct: 19 ELIGRGRYGAVYKGSL-DERPVAVKVFSFANR---QNFINEKNIYRVPLMEHDNIARFI- 73
Query: 790 ACSNDDFKA-------LIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHF- 841
++ A L+MEY PNGSL L T D + V L YLH
Sbjct: 74 -VGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS--DWVSSCRLAHSVTRGLAYLHTE 130
Query: 842 ----GHSTPIIHYM-------------VAHISDFSIAKFLNGQ------DQLSMQTQTLA 878
H P I + ISDF ++ L G ++ + +
Sbjct: 131 LPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVG 190
Query: 879 TIGYMAPEYGVQGRVSTRG--------DVYSYGIMLMETFTGKKPTDEIFIGE 923
TI YMAPE ++G V+ R D+Y+ G++ E F + TD +F GE
Sbjct: 191 TIRYMAPEV-LEGAVNLRDXESALKQVDMYALGLIYWEIFM--RCTD-LFPGE 239
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 21/204 (10%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQ---DECEVMKRIRH 781
D+F + LG GSFG V + + ++ G A+K+ ++ LK + +E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH- 840
LVK+ + ++ ++MEY+P G + + L + R + L EYLH
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS 159
Query: 841 ----FGHSTP----IIHYMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQG 891
+ P I ++DF AK + G +T L T Y+APE +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEIILSK 213
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
+ D ++ G+++ E G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 54/208 (25%), Positives = 88/208 (42%), Gaps = 25/208 (12%)
Query: 734 LGIGSFGSVYVAR-LQDGMEVAVKVFH--QRYERALKSFQDECEVMKRIRHRNLVKIISA 790
+G G+F V +AR + G EVAV++ Q +L+ E +MK + H N+VK+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 791 CSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHY 850
+ L+MEY G + + L + M + R + A++Y H I+H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYC---HQKFIVHR 137
Query: 851 ------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRV--STR 896
M I+DF + ++L + + Y APE QG+
Sbjct: 138 DLKAENLLLDADMNIKIADFGFSNEFTFGNKLD---EFCGSPPYAAPEL-FQGKKYDGPE 193
Query: 897 GDVYSYGIMLMETFTGKKPTDEIFIGEL 924
DV+S G++L +G P D + EL
Sbjct: 194 VDVWSLGVILYTLVSGSLPFDGQNLKEL 221
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 87/204 (42%), Gaps = 21/204 (10%)
Query: 726 DRFSKNNLLGIGSFGSVY-VARLQDGMEVAVKVFHQRYERALKSFQ---DECEVMKRIRH 781
D+F + LG GSFG V V ++ G A+K+ ++ LK + +E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH- 840
LVK+ + ++ ++MEY P G + + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS 159
Query: 841 ----FGHSTP----IIHYMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQG 891
+ P I ++DF AK + G +T L T Y+APE +
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEIILSK 213
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
+ D ++ G+++ E G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 21/204 (10%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQ---DECEVMKRIRH 781
D+F + LG GSFG V + + ++ G A+K+ ++ LK + +E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH- 840
LVK+ + ++ ++MEY+P G + + L + R + L EYLH
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS 159
Query: 841 ----FGHSTP----IIHYMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQG 891
+ P I ++DF AK + G +T L T Y+APE +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEIILSK 213
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
+ D ++ G+++ E G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 53/211 (25%), Positives = 95/211 (45%), Gaps = 37/211 (17%)
Query: 728 FSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRYERALKSFQD---ECEVMKRIRHRN 783
FS +G GSFG+VY AR +++ VA+K +++ + +QD E ++++RH N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVAL----ALEYL 839
++ + L+MEY L S + +L++ ++ +++A AL+ L
Sbjct: 77 TIQYRGCYLREHTAWLVMEYC--------LGSASDLLEVHKKPLQEVEIAAVTHGALQGL 128
Query: 840 HFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEY 887
+ HS +IH V + DF A + + + T +MAPE
Sbjct: 129 AYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXF------VGTPYWMAPEV 182
Query: 888 GV---QGRVSTRGDVYSYGIMLMETFTGKKP 915
+ +G+ + DV+S GI +E K P
Sbjct: 183 ILAMDEGQYDGKVDVWSLGITCIELAERKPP 213
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 21/204 (10%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQ---DECEVMKRIRH 781
D+F + LG GSFG V + + ++ G A+K+ ++ LK + +E +++ +
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH- 840
LVK+ + ++ ++MEY+P G + + L + R + L EYLH
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS 152
Query: 841 ----FGHSTP----IIHYMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQG 891
+ P I ++DF AK + G +T L T Y+APE +
Sbjct: 153 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEIILSK 206
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
+ D ++ G+++ E G P
Sbjct: 207 GYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 48.1 bits (113), Expect = 3e-05, Method: Composition-based stats.
Identities = 48/206 (23%), Positives = 93/206 (45%), Gaps = 30/206 (14%)
Query: 736 IGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSND 794
+G FG VY A+ ++ + A KV + E L+ + E +++ H N+VK++ A +
Sbjct: 20 LGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYE 79
Query: 795 DFKALIMEYMPNGSLENRLYSGTCMLDIFQRL---NIMIDVALALEYLHFGHSTPIIHYM 851
+ +++E+ G+++ ML++ + L I + L+ L++ H IIH
Sbjct: 80 NNLWILIEFCAGGAVD------AVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRD 133
Query: 852 VA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVST---- 895
+ ++DF ++ N + + + + T +MAPE V S
Sbjct: 134 LKAGNILFTLDGDIKLADFGVSA-KNTRTXIQRRDSFIGTPYWMAPEV-VMCETSKDRPY 191
Query: 896 --RGDVYSYGIMLMETFTGKKPTDEI 919
+ DV+S GI L+E + P E+
Sbjct: 192 DYKADVWSLGITLIEMAEIEPPHHEL 217
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 56/211 (26%), Positives = 89/211 (42%), Gaps = 31/211 (14%)
Query: 734 LGIGSFGSVYVAR-LQDGMEVAVKVFH--QRYERALKSFQDECEVMKRIRHRNLVKIISA 790
+G G+F V +AR + G EVAVK+ Q +L+ E +MK + H N+VK+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 791 CSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHY 850
+ L+MEY G + + L + M + R + A++Y H I+H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYC---HQKFIVHR 137
Query: 851 ------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIG---YMAPEYGVQGRV-- 893
M I+DF + ++ + + A G Y APE QG+
Sbjct: 138 DLKAENLLLDADMNIKIADFGFS------NEFTFGNKLDAFCGAPPYAAPEL-FQGKKYD 190
Query: 894 STRGDVYSYGIMLMETFTGKKPTDEIFIGEL 924
DV+S G++L +G P D + EL
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKEL 221
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 21/204 (10%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQ---DECEVMKRIRH 781
D+F + LG GSFG V + + ++ G A+K+ ++ LK + +E +++ +
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH- 840
LVK+ + ++ ++MEY+P G + + L + R + L EYLH
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS 180
Query: 841 ----FGHSTP----IIHYMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQG 891
+ P I ++DF AK + G +T L T Y+APE +
Sbjct: 181 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEIILSK 234
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
+ D ++ G+++ E G P
Sbjct: 235 GYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 21/204 (10%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQ---DECEVMKRIRH 781
D+F + LG GSFG V + + ++ G A+K+ ++ LK + +E +++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH- 840
LVK+ + ++ ++MEY+P G + + L + R + L EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS 160
Query: 841 ----FGHSTP----IIHYMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQG 891
+ P I ++DF AK + G +T L T Y+APE +
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEIILSK 214
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
+ D ++ G+++ E G P
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 21/204 (10%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQ---DECEVMKRIRH 781
D+F + LG GSFG V + + ++ G A+K+ ++ LK + +E +++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH- 840
LVK+ + ++ ++MEY+P G + + L + R + L EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS 160
Query: 841 ----FGHSTP----IIHYMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQG 891
+ P I ++DF AK + G +T L T Y+APE +
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEIILSK 214
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
+ D ++ G+++ E G P
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 21/204 (10%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQ---DECEVMKRIRH 781
D+F + LG GSFG V + + ++ G A+K+ ++ LK + +E +++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH- 840
LVK+ + ++ ++MEY+P G + + L + R + L EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS 160
Query: 841 ----FGHSTP----IIHYMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQG 891
+ P I ++DF AK + G +T L T Y+APE +
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEIILSK 214
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
+ D ++ G+++ E G P
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 87/204 (42%), Gaps = 21/204 (10%)
Query: 726 DRFSKNNLLGIGSFGSVY-VARLQDGMEVAVKVFHQRYERALKSFQ---DECEVMKRIRH 781
D+F + LG GSFG V V ++ G A+K+ ++ LK + +E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH- 840
LVK+ + ++ ++MEY P G + + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS 159
Query: 841 ----FGHSTP----IIHYMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQG 891
+ P I ++DF AK + G +T L T Y+APE +
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG------RTWXLCGTPEYLAPEIILSK 213
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
+ D ++ G+++ E G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 90/201 (44%), Gaps = 15/201 (7%)
Query: 726 DRFSKNNLLGIGSFGSV-YVARLQDGMEVAVKVFHQRYERALK-SFQDECEVMKRIRHRN 783
D F + + LG G+ G V V G+ +A K+ H + A++ E +V+
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 75
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCM-LDIFQRLNIMIDVALALEYLHFG 842
+V A +D ++ ME+M GSL+ L + +I +++I + LA YL
Sbjct: 76 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLA--YLREK 133
Query: 843 HSTPIIHY-------MVAHISDFSIAKF-LNGQDQLSMQTQTLATIGYMAPEYGVQGRVS 894
H I+H +V + + F ++GQ SM + T YMAPE S
Sbjct: 134 HQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMAPERLQGTHYS 191
Query: 895 TRGDVYSYGIMLMETFTGKKP 915
+ D++S G+ L+E G+ P
Sbjct: 192 VQSDIWSMGLSLVELAVGRYP 212
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 55/208 (26%), Positives = 88/208 (42%), Gaps = 25/208 (12%)
Query: 734 LGIGSFGSVYVAR-LQDGMEVAVKVFH--QRYERALKSFQDECEVMKRIRHRNLVKIISA 790
+G G+F V +AR + G EVAVK+ Q +L+ E +MK + H N+VK+
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 791 CSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHY 850
+ L+MEY G + + L + M + R + A++Y H + I+H
Sbjct: 83 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKY---IVHR 138
Query: 851 ------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRV--STR 896
M I+DF + ++L + Y APE QG+
Sbjct: 139 DLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDT---FCGSPPYAAPEL-FQGKKYDGPE 194
Query: 897 GDVYSYGIMLMETFTGKKPTDEIFIGEL 924
DV+S G++L +G P D + EL
Sbjct: 195 VDVWSLGVILYTLVSGSLPFDGQNLKEL 222
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 50/208 (24%), Positives = 86/208 (41%), Gaps = 30/208 (14%)
Query: 728 FSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALK----SFQDECEVMKRIRHR 782
F LG G+F V +A + G AVK ++ ALK S ++E V+++I+H
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKK---ALKGKESSIENEIAVLRKIKHE 80
Query: 783 NLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFG 842
N+V + + + L+M+ + G L +R+ + + + L+ +++
Sbjct: 81 NIVALEDIYESPNHLYLVMQLVSGGELFDRIVEK----GFYTEKDASTLIRQVLDAVYYL 136
Query: 843 HSTPIIHYMVA---------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEY 887
H I+H + ISDF ++K D +S T GY+APE
Sbjct: 137 HRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMST---ACGTPGYVAPEV 193
Query: 888 GVQGRVSTRGDVYSYGIMLMETFTGKKP 915
Q S D +S G++ G P
Sbjct: 194 LAQKPYSKAVDCWSIGVIAYILLCGYPP 221
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 88/204 (43%), Gaps = 21/204 (10%)
Query: 726 DRFSKNNLLGIGSFGSVY-VARLQDGMEVAVKVFHQRYERALKSFQ---DECEVMKRIRH 781
D+F + +G GSFG V V ++ G A+K+ ++ LK + +E +++ +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH- 840
LVK+ + ++ ++MEY+P G + + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS 159
Query: 841 ----FGHSTP----IIHYMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQG 891
+ P I ++DF AK + G +T L T Y+APE +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG------RTWXLCGTPEYLAPEIILSK 213
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
+ D ++ G+++ E G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 88/217 (40%), Gaps = 29/217 (13%)
Query: 721 LLQATDRFSKN----NLLGIGSFGSVY-VARLQDGMEVAVKVFHQRY--ERALKSFQDEC 773
++ A+ +FS N LG G+F V G+E A K+ + + R + + E
Sbjct: 20 MMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREA 79
Query: 774 EVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVA 833
+ ++++H N+V++ + + F L+ + + G L+ + + + +
Sbjct: 80 RICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGE----LFEDIVAREFYSEADASHCIQ 135
Query: 834 LALEYLHFGHSTPIIHY---------------MVAHISDFSIAKFLNGQDQLSMQTQTLA 878
LE + + HS I+H ++DF +A +N +
Sbjct: 136 QILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAG 192
Query: 879 TIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKP 915
T GY++PE + S D+++ G++L G P
Sbjct: 193 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 229
>pdb|3ZYJ|A Chain A, Netring1 In Complex With Ngl1
pdb|3ZYJ|C Chain C, Netring1 In Complex With Ngl1
Length = 440
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 89/168 (52%), Gaps = 13/168 (7%)
Query: 432 FSRLLNLQGLGLAFNKLARSIPD-EICHLAKLDKLILHGNKFSGAIPSCSGN-LTSLRAL 489
F+ L NL L L N+L +IP+ +L+KL +L L N +IPS + N + SLR L
Sbjct: 108 FNGLANLNTLELFDNRLT-TIPNGAFVYLSKLKELWLRNNPIE-SIPSYAFNRIPSLRRL 165
Query: 490 YLGS-NRFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVI---ELNLSRNNLS 545
LG R + L ++ + +++ +L +I NL +I EL+LS N+LS
Sbjct: 166 DLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-----EIPNLTPLIKLDELDLSGNHLS 220
Query: 546 GDIPITIGGLKNLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNKIS 593
P + GL +LQKL++ ++++ +F L SL ++L+ N ++
Sbjct: 221 AIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLT 268
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 51/198 (25%), Positives = 85/198 (42%), Gaps = 25/198 (12%)
Query: 734 LGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKSFQ---DECEVMKRIRHRNLVKIIS 789
LG GSFG V++ R + +G A+KV + LK + DE ++ + H ++++
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWG 73
Query: 790 ACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIH 849
+ +IM+Y+ G L + L + + +V LALEYL HS II+
Sbjct: 74 TFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF-YAAEVCLALEYL---HSKDIIY 129
Query: 850 YMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRG 897
+ I+DF AK++ + T Y+APE +
Sbjct: 130 RDLKPENILLDKNGHIKITDFGFAKYVP-----DVTYXLCGTPDYIAPEVVSTKPYNKSI 184
Query: 898 DVYSYGIMLMETFTGKKP 915
D +S+GI++ E G P
Sbjct: 185 DWWSFGILIYEMLAGYTP 202
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 46/202 (22%), Positives = 95/202 (47%), Gaps = 17/202 (8%)
Query: 731 NNLLGIGSFGSVY----VARLQDGMEVAVKVFHQRYE-RALKSFQDECEVMKRIRHRNLV 785
+ ++G G FG VY + + Q+ ++ A+K + E + +++F E +M+ + H N++
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVL 85
Query: 786 KIIS-ACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYL---HF 841
+I + +++ YM +G L + S + ++ + VA +EYL F
Sbjct: 86 ALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKF 145
Query: 842 GH------STPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLA--TIGYMAPEYGVQGRV 893
H + + ++DF +A+ + ++ S+Q A + + A E R
Sbjct: 146 VHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRF 205
Query: 894 STRGDVYSYGIMLMETFTGKKP 915
+T+ DV+S+G++L E T P
Sbjct: 206 TTKSDVWSFGVLLWELLTRGAP 227
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 86/211 (40%), Gaps = 38/211 (18%)
Query: 728 FSKNNLLGIGSFGSVYVARLQDGMEV--AVKVFHQRYERALKSFQDECEVMKRIRHRNLV 785
++ N +G GS+G V +A +Q G + A K + + + F+ E E+MK + H N++
Sbjct: 11 YTLENTIGRGSWGEVKIA-VQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 69
Query: 786 KIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHST 845
++ ++ L+ME G L R+ + IM DV A+ Y H
Sbjct: 70 RLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRES-DAARIMKDVLSAVAYCH----- 123
Query: 846 PIIHYMVAH--------------------ISDFSI-AKFLNGQDQLSMQTQTLATIGYMA 884
VAH + DF + A+F G+ M + T Y++
Sbjct: 124 ---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK----MMRTKVGTPYYVS 176
Query: 885 PEYGVQGRVSTRGDVYSYGIMLMETFTGKKP 915
P+ ++G D +S G+M+ G P
Sbjct: 177 PQV-LEGLYGPECDEWSAGVMMYVLLCGYPP 206
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 50/216 (23%), Positives = 90/216 (41%), Gaps = 28/216 (12%)
Query: 721 LLQATDRFSKNNLLGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIR 780
++ +DR+ +G G+FG + R + E+ + +R E+ ++ + E + +R
Sbjct: 14 IMHDSDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLR 73
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRL-----YSGTCMLDIFQRLNIMIDVALA 835
H N+V+ A++MEY G L R+ +S FQ+L + A A
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHA 133
Query: 836 LEYLHF----------GHSTPIIHYMVAHISDF--SIAKFLNGQDQLSMQTQTLATIGYM 883
++ H G P + I+DF S A L+ Q + + T Y+
Sbjct: 134 MQVAHRDLKLENTLLDGSPAPRL-----KIADFGYSKASVLHSQPK-----SAVGTPAYI 183
Query: 884 APEYGVQGRVSTR-GDVYSYGIMLMETFTGKKPTDE 918
APE ++ + DV+S G+ L G P ++
Sbjct: 184 APEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED 219
>pdb|3ZYN|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
pdb|3ZYN|B Chain B, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
Length = 321
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 111/290 (38%), Gaps = 58/290 (20%)
Query: 279 SRIDLSLP-NVEFLNLGTNRFSGNIPSSITNASKLTVFQLRGNSFSGFIPNTIGNLRNLE 337
+ + S+P N +LNL N + + L + QL N L +L
Sbjct: 27 AEVPASIPVNTRYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLN 86
Query: 338 FLNIADNYLTS-STPELSFLSSLTNCQKIRVLILAGNPLDGILPSSIGNLSISLERFQMF 396
L + DN LT+ T +LS K+R L L NP++ I PS N SL R +
Sbjct: 87 TLELFDNRLTTVPTQAFEYLS------KLRELWLRNNPIESI-PSYAFNRVPSLRRLDLG 139
Query: 397 NCRISGKIPQVISXXXXXXXXXXXXXXXXXSIPVTFSRLLNLQGLGLAFNKLARSIPDEI 456
+ I + F L+NL+ L L L + IP+ +
Sbjct: 140 ELKRLEYISEA-----------------------AFEGLVNLRYLNLGMCNL-KDIPN-L 174
Query: 457 CHLAKLDKLILHGNKFSGAIPSCSGNLTSLRALYLGSNRFTSALPSTIWNLKDILFFDVS 516
L +L++L L GN+ P LTSLR L+L + + +
Sbjct: 175 TALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVAT----------------IE 218
Query: 517 SNSLDGPLSLDIGNLKVVIELNLSRNNLSGDIPITIGGLKNLQKLFLANN 566
N+ D +LK + ELNLS NNL L L+++ L +N
Sbjct: 219 RNAFD--------DLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 260
Score = 37.4 bits (85), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 79/166 (47%), Gaps = 27/166 (16%)
Query: 431 TFSRLLNLQGLGLAFNKLARSIPDEICHLAKLDKLILHGNKFSGAIPSCSGN-LTSLRAL 489
F+ L +L L L N+L +L+KL +L L N +IPS + N + SLR L
Sbjct: 78 AFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLRRL 136
Query: 490 YLGSNRFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRNNLSGDIP 549
LG LK + + +S + +G + NL+ LNL NL DIP
Sbjct: 137 DLGE-------------LKRLEY--ISEAAFEG-----LVNLRY---LNLGMCNLK-DIP 172
Query: 550 ITIGGLKNLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNKISGV 595
+ L L++L L+ NRL+ P SF GL+SL L L +++ +
Sbjct: 173 -NLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATI 217
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 84/198 (42%), Gaps = 27/198 (13%)
Query: 226 RGEIPQEMGNLPYLVRLTLATNNLVGVVPFTIFNMSTLKKLSLLENTLWGSLPSRIDLS- 284
R E+ + ++P R N + V+ F L+ L +L+ L +L +I++
Sbjct: 23 RRELAEVPASIPVNTRYLNLQENSIQVIRTDTFKH--LRHLEILQ--LSKNLVRKIEVGA 78
Query: 285 ---LPNVEFLNLGTNRFSGNIPSSITNASKLTVFQLRGNSFSGF-------IPN----TI 330
LP++ L L NR + + SKL LR N +P+ +
Sbjct: 79 FNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDL 138
Query: 331 GNLRNLEFLNIAD-------NYLTSSTPELSFLSSLTNCQKIRVLILAGNPLDGILPSSI 383
G L+ LE+++ A YL L + +LT ++ L L+GN LD I P S
Sbjct: 139 GELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPNLTALVRLEELELSGNRLDLIRPGSF 198
Query: 384 GNLSISLERFQMFNCRIS 401
L+ SL + + + +++
Sbjct: 199 QGLT-SLRKLWLMHAQVA 215
Score = 30.8 bits (68), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 97/217 (44%), Gaps = 39/217 (17%)
Query: 91 LSSLETLDLSHNKLSGNIPSSIFN-MHTLKLLDFRDNQLFGSLSSFIFN-MSSMLGIDLS 148
L SL TL+L N+L+ +P+ F + L+ L R+N + S+ S+ FN + S+ +DL
Sbjct: 82 LPSLNTLELFDNRLT-TVPTQAFEYLSKLRELWLRNNPI-ESIPSYAFNRVPSLRRLDL- 138
Query: 149 INRFSGELPANICXXXXXXXXXXXGRNMFHGKIPSTLSKCKQLEGLY-LRFNNLSGAIPK 207
GEL K +S+ EGL LR+ NL K
Sbjct: 139 -----GEL-----------------------KRLEYISE-AAFEGLVNLRYLNLGMCNLK 169
Query: 208 EIGNLT---KLKDIILNDNELRGEIPQEMGNLPYLVRLTLATNNLVGVVPFTIFNMSTLK 264
+I NLT +L+++ L+ N L P L L +L L + + ++ +L+
Sbjct: 170 DIPNLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLE 229
Query: 265 KLSLLENTLWGSLPSRIDLSLPNVEFLNLGTNRFSGN 301
+L+L N L SLP + L +E ++L N + N
Sbjct: 230 ELNLSHNNL-MSLPHDLFTPLHRLERVHLNHNPWHCN 265
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 47.0 bits (110), Expect = 6e-05, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 740 GSVYVARLQDGMEVAVKVFHQR--YERALKSFQDECEVMKRIRHRNLVKIISACSND--D 795
G ++ R Q G ++ VKV R R + F +EC ++ H N++ ++ AC +
Sbjct: 24 GELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 796 FKALIMEYMPNGSLENRLYSGT-CMLDIFQRLNIMIDVALALEYLH 840
LI + P GSL N L+ GT ++D Q + +D A +LH
Sbjct: 83 HPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLH 128
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 86/211 (40%), Gaps = 38/211 (18%)
Query: 728 FSKNNLLGIGSFGSVYVARLQDGMEV--AVKVFHQRYERALKSFQDECEVMKRIRHRNLV 785
++ N +G GS+G V +A +Q G + A K + + + F+ E E+MK + H N++
Sbjct: 28 YTLENTIGRGSWGEVKIA-VQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 86
Query: 786 KIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHST 845
++ ++ L+ME G L R+ + IM DV A+ Y H
Sbjct: 87 RLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRES-DAARIMKDVLSAVAYCH----- 140
Query: 846 PIIHYMVAH--------------------ISDFSI-AKFLNGQDQLSMQTQTLATIGYMA 884
VAH + DF + A+F G+ M + T Y++
Sbjct: 141 ---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK----MMRTKVGTPYYVS 193
Query: 885 PEYGVQGRVSTRGDVYSYGIMLMETFTGKKP 915
P+ ++G D +S G+M+ G P
Sbjct: 194 PQV-LEGLYGPECDEWSAGVMMYVLLCGYPP 223
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 86/204 (42%), Gaps = 21/204 (10%)
Query: 726 DRFSKNNLLGIGSFGSVY-VARLQDGMEVAVKVFHQRYERALKSFQ---DECEVMKRIRH 781
D+F + LG GSFG V V ++ G A+K+ ++ LK + +E +++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH- 840
L K+ + ++ ++MEY P G + + L + R + L EYLH
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHS 160
Query: 841 ----FGHSTP----IIHYMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQG 891
+ P I ++DF AK + G +T L T Y+APE +
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG------RTWXLCGTPEYLAPEIILSK 214
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
+ D ++ G+++ E G P
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 88/204 (43%), Gaps = 21/204 (10%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQ---DECEVMKRIRH 781
D+F + LG GSFG V + + ++ G A+K+ ++ LK + +E +++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH- 840
LVK+ + ++ ++MEY P G + + L + R + L EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS 160
Query: 841 ----FGHSTP----IIHYMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQG 891
+ P I ++DF AK + G +T L T Y+APE +
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG------RTWXLCGTPEYLAPEIILSK 214
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
+ D ++ G+++ E G P
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3ZYO|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
And Immunoglobulin Domain Of Netrin-G Ligand-3
Length = 411
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 111/290 (38%), Gaps = 58/290 (20%)
Query: 279 SRIDLSLP-NVEFLNLGTNRFSGNIPSSITNASKLTVFQLRGNSFSGFIPNTIGNLRNLE 337
+ + S+P N +LNL N + + L + QL N L +L
Sbjct: 27 AEVPASIPVNTRYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLN 86
Query: 338 FLNIADNYLTS-STPELSFLSSLTNCQKIRVLILAGNPLDGILPSSIGNLSISLERFQMF 396
L + DN LT+ T +LS K+R L L NP++ I PS N SL R +
Sbjct: 87 TLELFDNRLTTVPTQAFEYLS------KLRELWLRNNPIESI-PSYAFNRVPSLRRLDLG 139
Query: 397 NCRISGKIPQVISXXXXXXXXXXXXXXXXXSIPVTFSRLLNLQGLGLAFNKLARSIPDEI 456
+ I + F L+NL+ L L L + IP+ +
Sbjct: 140 ELKRLEYISEA-----------------------AFEGLVNLRYLNLGMCNL-KDIPN-L 174
Query: 457 CHLAKLDKLILHGNKFSGAIPSCSGNLTSLRALYLGSNRFTSALPSTIWNLKDILFFDVS 516
L +L++L L GN+ P LTSLR L+L + + +
Sbjct: 175 TALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVAT----------------IE 218
Query: 517 SNSLDGPLSLDIGNLKVVIELNLSRNNLSGDIPITIGGLKNLQKLFLANN 566
N+ D +LK + ELNLS NNL L L+++ L +N
Sbjct: 219 RNAFD--------DLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 260
Score = 37.7 bits (86), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 78/165 (47%), Gaps = 27/165 (16%)
Query: 432 FSRLLNLQGLGLAFNKLARSIPDEICHLAKLDKLILHGNKFSGAIPSCSGN-LTSLRALY 490
F+ L +L L L N+L +L+KL +L L N +IPS + N + SLR L
Sbjct: 79 FNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLRRLD 137
Query: 491 LGSNRFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRNNLSGDIPI 550
LG LK + + +S + +G ++L LNL NL DIP
Sbjct: 138 LGE-------------LKRLEY--ISEAAFEGLVNLRY--------LNLGMCNLK-DIP- 172
Query: 551 TIGGLKNLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNKISGV 595
+ L L++L L+ NRL+ P SF GL+SL L L +++ +
Sbjct: 173 NLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATI 217
Score = 32.0 bits (71), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 84/198 (42%), Gaps = 27/198 (13%)
Query: 226 RGEIPQEMGNLPYLVRLTLATNNLVGVVPFTIFNMSTLKKLSLLENTLWGSLPSRIDLS- 284
R E+ + ++P R N + V+ F L+ L +L+ L +L +I++
Sbjct: 23 RRELAEVPASIPVNTRYLNLQENSIQVIRTDTFKH--LRHLEILQ--LSKNLVRKIEVGA 78
Query: 285 ---LPNVEFLNLGTNRFSGNIPSSITNASKLTVFQLRGNSFSGF-------IPN----TI 330
LP++ L L NR + + SKL LR N +P+ +
Sbjct: 79 FNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDL 138
Query: 331 GNLRNLEFLNIAD-------NYLTSSTPELSFLSSLTNCQKIRVLILAGNPLDGILPSSI 383
G L+ LE+++ A YL L + +LT ++ L L+GN LD I P S
Sbjct: 139 GELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPNLTALVRLEELELSGNRLDLIRPGSF 198
Query: 384 GNLSISLERFQMFNCRIS 401
L+ SL + + + +++
Sbjct: 199 QGLT-SLRKLWLMHAQVA 215
Score = 30.4 bits (67), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 97/217 (44%), Gaps = 39/217 (17%)
Query: 91 LSSLETLDLSHNKLSGNIPSSIFN-MHTLKLLDFRDNQLFGSLSSFIFN-MSSMLGIDLS 148
L SL TL+L N+L+ +P+ F + L+ L R+N + S+ S+ FN + S+ +DL
Sbjct: 82 LPSLNTLELFDNRLT-TVPTQAFEYLSKLRELWLRNNPI-ESIPSYAFNRVPSLRRLDL- 138
Query: 149 INRFSGELPANICXXXXXXXXXXXGRNMFHGKIPSTLSKCKQLEGLY-LRFNNLSGAIPK 207
GEL K +S+ EGL LR+ NL K
Sbjct: 139 -----GEL-----------------------KRLEYISE-AAFEGLVNLRYLNLGMCNLK 169
Query: 208 EIGNLT---KLKDIILNDNELRGEIPQEMGNLPYLVRLTLATNNLVGVVPFTIFNMSTLK 264
+I NLT +L+++ L+ N L P L L +L L + + ++ +L+
Sbjct: 170 DIPNLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLE 229
Query: 265 KLSLLENTLWGSLPSRIDLSLPNVEFLNLGTNRFSGN 301
+L+L N L SLP + L +E ++L N + N
Sbjct: 230 ELNLSHNNL-MSLPHDLFTPLHRLERVHLNHNPWHCN 265
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 88/216 (40%), Gaps = 28/216 (12%)
Query: 721 LLQATDRFSKNNLLGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIR 780
++ +DR+ +G G+FG + R + E+ + +R E+ + + E + +R
Sbjct: 14 IMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLR 73
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRL-----YSGTCMLDIFQRLNIMIDVALA 835
H N+V+ A++MEY G L R+ +S FQ+L + A
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHA 133
Query: 836 LEYLHF----------GHSTPIIHYMVAHISDFSIAK--FLNGQDQLSMQTQTLATIGYM 883
++ H G P + I DF +K L+ Q + T+ T Y+
Sbjct: 134 MQVCHRDLKLENTLLDGSPAPRL-----KICDFGYSKSSVLHSQPK-----STVGTPAYI 183
Query: 884 APEYGVQGRVSTR-GDVYSYGIMLMETFTGKKPTDE 918
APE ++ + DV+S G+ L G P ++
Sbjct: 184 APEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED 219
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 46.6 bits (109), Expect = 8e-05, Method: Composition-based stats.
Identities = 50/199 (25%), Positives = 86/199 (43%), Gaps = 26/199 (13%)
Query: 734 LGIGSFGSVYV-----ARLQDGMEVAVKVFHQRYERALKS-FQDECEVMKRIRHRNLVKI 787
LG G FG V + G VAVK +S ++ E ++++ + H +++K
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 788 ISACSNDDFKAL--IMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHST 845
C + +L +MEY+P GSL + L + + + Q L + + YLH H
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLHAQH-- 154
Query: 846 PIIHYMVA------------HISDFSIAKFL-NGQDQLSMQTQTLATIGYMAPEYGVQGR 892
IH +A I DF +AK + G + ++ + + + APE + +
Sbjct: 155 -YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYK 213
Query: 893 VSTRGDVYSYGIMLMETFT 911
DV+S+G+ L E T
Sbjct: 214 FYYASDVWSFGVTLYELLT 232
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 102/234 (43%), Gaps = 31/234 (13%)
Query: 706 GINSPQAIRRFSYHELLQAT--------------DRFSKNNLLGIGSFGSVYVARLQD-G 750
G SPQ + HE +A D F K +G GS G V +A ++ G
Sbjct: 120 GPRSPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIK---IGEGSTGIVCIATVRSSG 176
Query: 751 MEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLE 810
VAVK R ++ + +E +M+ +H N+V++ ++ D ++ME++ G+L
Sbjct: 177 KLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 236
Query: 811 NRLYSGTCMLDIFQRLNIMIDVALALEYLHF---------GHSTPIIHYMVAHISDFSIA 861
+ + + T M + Q + + V AL LH S + H +SDF
Sbjct: 237 D-IVTHTRM-NEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFC 294
Query: 862 KFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKP 915
++ ++ + + T +MAPE + D++S GIM++E G+ P
Sbjct: 295 AQVS--KEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 346
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 95/209 (45%), Gaps = 26/209 (12%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQDGMEV-AVKVFHQR--YER-ALKSFQDECEVMKRIRH 781
D F +G GSFG V + + D ++ A+K +++ ER +++ E ++M+ + H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHF 841
LV + + +++ ++++ + G L L + +L + ++ +AL+YL
Sbjct: 75 PFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKL-FICELVMALDYLQ- 132
Query: 842 GHSTPIIH------------YMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGV 889
+ IIH + HI+DF+IA L + Q+ T T YMAPE
Sbjct: 133 --NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQI---TTMAGTKPYMAPEMFS 187
Query: 890 QGR---VSTRGDVYSYGIMLMETFTGKKP 915
+ S D +S G+ E G++P
Sbjct: 188 SRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 86/204 (42%), Gaps = 21/204 (10%)
Query: 726 DRFSKNNLLGIGSFGSVY-VARLQDGMEVAVKVFHQRYERALKSFQ---DECEVMKRIRH 781
D+F + LG GSFG V V ++ G A+K+ ++ LK + +E +++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH- 840
L K+ + ++ ++MEY P G + + L + R + L EYLH
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS 160
Query: 841 ----FGHSTP----IIHYMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQG 891
+ P I ++DF AK + G +T L T Y+APE +
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG------RTWXLCGTPEYLAPEIILSK 214
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
+ D ++ G+++ E G P
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 89/216 (41%), Gaps = 28/216 (12%)
Query: 721 LLQATDRFSKNNLLGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIR 780
++ +DR+ +G G+FG + R + E+ + +R E+ ++ + E + +R
Sbjct: 13 IMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLR 72
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRL-----YSGTCMLDIFQRLNIMIDVALA 835
H N+V+ A++MEY G L R+ +S FQ+L + A
Sbjct: 73 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHA 132
Query: 836 LEYLHF----------GHSTPIIHYMVAHISDFSIAK--FLNGQDQLSMQTQTLATIGYM 883
++ H G P + I DF +K L+ Q + T+ T Y+
Sbjct: 133 MQVCHRDLKLENTLLDGSPAPRL-----KICDFGYSKSSVLHSQPK-----STVGTPAYI 182
Query: 884 APEYGVQGRVSTR-GDVYSYGIMLMETFTGKKPTDE 918
APE ++ + DV+S G+ L G P ++
Sbjct: 183 APEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED 218
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 86/204 (42%), Gaps = 21/204 (10%)
Query: 726 DRFSKNNLLGIGSFGSVY-VARLQDGMEVAVKVFHQRYERALKSFQ---DECEVMKRIRH 781
D+F + LG GSFG V V ++ G A+K+ ++ LK + +E +++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH- 840
L K+ + ++ ++MEY P G + + L + R + L EYLH
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS 160
Query: 841 ----FGHSTP----IIHYMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQG 891
+ P I ++DF AK + G +T L T Y+APE +
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG------RTWXLCGTPEYLAPEIILSK 214
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
+ D ++ G+++ E G P
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 88/204 (43%), Gaps = 21/204 (10%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQ---DECEVMKRIRH 781
D+F + LG GSFG V + + ++ G A+K+ ++ LK + +E +++ +
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH- 840
LVK+ + ++ ++MEY+ G + + L + R + L EYLH
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS 180
Query: 841 ----FGHSTP----IIHYMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQG 891
+ P I ++DF AK + G T TL T Y+APE +
Sbjct: 181 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------ATWTLCGTPEYLAPEIILSK 234
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
+ D ++ G+++ E G P
Sbjct: 235 GYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 21/204 (10%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQ---DECEVMKRIRH 781
D+F + LG GSFG V + + ++ G A+K+ ++ LK + +E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH- 840
LVK+ + ++ ++MEY+ G + + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS 159
Query: 841 ----FGHSTP----IIHYMVAHISDFSIAKFLNGQDQLSMQTQTLA-TIGYMAPEYGVQG 891
+ P I ++DF AK + G +T LA T Y+APE +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLAGTPEYLAPEIILSK 213
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
+ D ++ G+++ E G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 102/243 (41%), Gaps = 39/243 (16%)
Query: 701 GSSNDGIN-SPQAIRRFSYHELLQATDRFSKNNLLGIGSFGSVYVARLQDG--------M 751
GSS +N P+ IR + ELL+ +LG G +G V+ R G M
Sbjct: 1 GSSETSVNRGPEKIRPECF-ELLR---------VLGKGGYGKVFQVRKVTGANTGKIFAM 50
Query: 752 EVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLEN 811
+V K R + + E +++ ++H +V +I A LI+EY+ G L
Sbjct: 51 KVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFM 110
Query: 812 RL-YSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHY-------MVAHISDFSIAKF 863
+L G M D + ++++AL +LH II+ M+ H + F
Sbjct: 111 QLEREGIFMEDT--ACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDF 165
Query: 864 LNGQDQLSMQTQT---LATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIF 920
++ + T T TI YMAPE ++ + D +S G ++ + TG P F
Sbjct: 166 GLCKESIHDGTVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP----F 221
Query: 921 IGE 923
GE
Sbjct: 222 TGE 224
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 102/243 (41%), Gaps = 39/243 (16%)
Query: 701 GSSNDGIN-SPQAIRRFSYHELLQATDRFSKNNLLGIGSFGSVYVARLQDG--------M 751
GSS +N P+ IR + ELL+ +LG G +G V+ R G M
Sbjct: 1 GSSETSVNRGPEKIRPECF-ELLR---------VLGKGGYGKVFQVRKVTGANTGKIFAM 50
Query: 752 EVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLEN 811
+V K R + + E +++ ++H +V +I A LI+EY+ G L
Sbjct: 51 KVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFM 110
Query: 812 RL-YSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHY-------MVAHISDFSIAKF 863
+L G M D + ++++AL +LH II+ M+ H + F
Sbjct: 111 QLEREGIFMEDT--ACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDF 165
Query: 864 LNGQDQLSMQTQT---LATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIF 920
++ + T T TI YMAPE ++ + D +S G ++ + TG P F
Sbjct: 166 GLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP----F 221
Query: 921 IGE 923
GE
Sbjct: 222 TGE 224
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 103/228 (45%), Gaps = 40/228 (17%)
Query: 728 FSKNNLLGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQD-ECEVMKRIRHRNLVK 786
++ ++G GSFG V+ A+L + EVA+K Q K F++ E ++M+ ++H N+V
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQD-----KRFKNRELQIMRIVKHPNVVD 96
Query: 787 IIS-ACSNDD-----FKALIMEYMPNGSLE-NRLYSGTCMLDIFQRLNIMIDVALALEYL 839
+ + SN D F L++EY+P +R Y+ + L I + + L L
Sbjct: 97 LKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAK--LKQTMPMLLIKLYMYQLLRSL 154
Query: 840 HFGHSTPIIHYM-------------VAHISDFSIAKFL-NGQDQLSMQTQTLATIGYMAP 885
+ HS I H V + DF AK L G+ +S + + Y AP
Sbjct: 155 AYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVS----XICSRYYRAP 210
Query: 886 E--YGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVN 931
E +G +T D++S G ++ E G+ +F GE + + V
Sbjct: 211 ELIFGATN-YTTNIDIWSTGCVMAELMQGQP----LFPGESGIDQLVE 253
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 102/234 (43%), Gaps = 31/234 (13%)
Query: 706 GINSPQAIRRFSYHELLQAT--------------DRFSKNNLLGIGSFGSVYVARLQD-G 750
G SPQ + HE +A D F K +G GS G V +A ++ G
Sbjct: 43 GPRSPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIK---IGEGSTGIVCIATVRSSG 99
Query: 751 MEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLE 810
VAVK R ++ + +E +M+ +H N+V++ ++ D ++ME++ G+L
Sbjct: 100 KLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 159
Query: 811 NRLYSGTCMLDIFQRLNIMIDVALALEYLHF---------GHSTPIIHYMVAHISDFSIA 861
+ + + T M + Q + + V AL LH S + H +SDF
Sbjct: 160 D-IVTHTRM-NEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFC 217
Query: 862 KFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKP 915
++ ++ + + T +MAPE + D++S GIM++E G+ P
Sbjct: 218 AQVS--KEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 269
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 25/201 (12%)
Query: 734 LGIGSFGSVYVAR-LQDGMEVAVKVFH--QRYERALKSFQDECEVMKRIRHRNLVKIISA 790
+G G+F V +AR + G EVAVK+ Q +L+ E +MK + H N+VK+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 791 CSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHY 850
+ L+MEY G + + L + M + R + A++Y H I+H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYC---HQKFIVHR 137
Query: 851 ------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRV--STR 896
M I+DF + ++L + Y APE QG+
Sbjct: 138 DLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPEL-FQGKKYDGPE 193
Query: 897 GDVYSYGIMLMETFTGKKPTD 917
DV+S G++L +G P D
Sbjct: 194 VDVWSLGVILYTLVSGSLPFD 214
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 76/192 (39%), Gaps = 15/192 (7%)
Query: 726 DRFSKNNLLGIGSFGSVY-VARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNL 784
D + + LG G+FG V+ V G A K +E ++ + E + M +RH L
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 785 VKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALAL------EY 838
V + A +D+ +I E+M G L ++ + + + M V L Y
Sbjct: 217 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNY 276
Query: 839 LHFGHSTPIIHYMVAH-----ISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRV 893
+H I + + DF + L+ + + + T T + APE V
Sbjct: 277 VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV---TTGTAEFAAPEVAEGKPV 333
Query: 894 STRGDVYSYGIM 905
D++S G++
Sbjct: 334 GYYTDMWSVGVL 345
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 39/207 (18%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRI--RHRNLVKIISAC 791
+G G FG V+ + + G EVAVK+F R ER S+ E E+ + + RH N++ I+A
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVKIFSSREER---SWFREAEIYQTVMLRHENILGFIAAD 105
Query: 792 SNDDFK----ALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFG----H 843
+ D+ L+ +Y +GSL + L T ++ + + + A L +LH
Sbjct: 106 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--IKLALSTASGLAHLHMEIVGTQ 163
Query: 844 STPIIHYM-------------VAHISDFSIA-KFLNGQDQLSMQ-TQTLATIGYMAPEYG 888
P I + I+D +A + + D + + + T YMAPE
Sbjct: 164 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEV- 222
Query: 889 VQGRVS-------TRGDVYSYGIMLME 908
+ ++ R D+Y+ G++ E
Sbjct: 223 LDDSINMKHFESFKRADIYAMGLVFWE 249
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 45.4 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 52/206 (25%), Positives = 96/206 (46%), Gaps = 29/206 (14%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNL 784
D F K +G GS G V +A ++ G VAVK R ++ + +E +M+ +H N+
Sbjct: 32 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 88
Query: 785 VKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLN--IMIDVALA-LEYLHF 841
V++ ++ D ++ME++ G+L + + R+N + V LA L+ L
Sbjct: 89 VEMYNSYLVGDELWVVMEFLEGGALTD--------IVTHTRMNEEQIAAVCLAVLQALSV 140
Query: 842 GHSTPIIH-------YMVAH-----ISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGV 889
H+ +IH ++ H +SDF ++ ++ + + T +MAPE
Sbjct: 141 LHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS--KEVPRRKXLVGTPYWMAPELIS 198
Query: 890 QGRVSTRGDVYSYGIMLMETFTGKKP 915
+ D++S GIM++E G+ P
Sbjct: 199 RLPYGPEVDIWSLGIMVIEMVDGEPP 224
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 87/204 (42%), Gaps = 21/204 (10%)
Query: 726 DRFSKNNLLGIGSFGSVY-VARLQDGMEVAVKVFHQRYERALKSFQ---DECEVMKRIRH 781
D+F + LG GSFG V V ++ G A+K+ ++ LK + +E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH- 840
LVK+ + ++ ++MEY+ G + + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS 159
Query: 841 ----FGHSTP----IIHYMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQG 891
+ P I ++DF AK + G +T L T Y+APE +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEIILSK 213
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
+ D ++ G+++ E G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 88/204 (43%), Gaps = 21/204 (10%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQ---DECEVMKRIRH 781
D+F + LG GSFG V + + ++ G A+K+ ++ LK + +E +++ +
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH- 840
LVK+ + ++ ++MEY+ G + + L + R + L EYLH
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHS 180
Query: 841 ----FGHSTP----IIHYMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQG 891
+ P I ++DF AK + G +T L T Y+APE +
Sbjct: 181 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEIILSK 234
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
+ D ++ G+++ E G P
Sbjct: 235 GYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 25/201 (12%)
Query: 734 LGIGSFGSVYVAR-LQDGMEVAVKVFH--QRYERALKSFQDECEVMKRIRHRNLVKIISA 790
+G G+F V +AR + G EVAVK+ Q +L+ E +MK + H N+VK+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 791 CSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHY 850
+ L+MEY G + + L + M + R + A++Y H I+H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYC---HQKFIVHR 137
Query: 851 ------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRV--STR 896
M I+DF + ++L + Y APE QG+
Sbjct: 138 DLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPEL-FQGKKYDGPE 193
Query: 897 GDVYSYGIMLMETFTGKKPTD 917
DV+S G++L +G P D
Sbjct: 194 VDVWSLGVILYTLVSGSLPFD 214
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 100/239 (41%), Gaps = 31/239 (12%)
Query: 719 HELLQATDRFSKNNLLGIGSFGSVYVARLQDGMEV-AVKVFH-QRYERALKSFQDECEVM 776
H + + F+K + +G GSFG VY EV A+K+ + E ++ Q E V+
Sbjct: 12 HSRVDPEELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVL 71
Query: 777 KRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALAL 836
+ + + + +IMEY+ GS + L G L+ I+ ++ L
Sbjct: 72 SQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGP--LEETYIATILREILKGL 129
Query: 837 EYLHFGHSTPIIH-------YMVAHISDFSIAKF-LNGQ--DQLSMQTQTLATIGYMAPE 886
+YLH S IH +++ D +A F + GQ D + + T +MAPE
Sbjct: 130 DYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPE 186
Query: 887 YGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTN 945
Q + D++S GI +E G+ P +DL P+ V+ +I N
Sbjct: 187 VIKQSAYDFKADIWSLGITAIELAKGEPPN--------------SDLHPMRVLFLIPKN 231
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 88/204 (43%), Gaps = 21/204 (10%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQ---DECEVMKRIRH 781
D+F + LG GSFG V + + ++ G A+K+ ++ LK + +E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH- 840
LVK+ + ++ ++MEY+ G + + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS 159
Query: 841 ----FGHSTP----IIHYMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQG 891
+ P I ++DF AK + G +T L T Y+APE +
Sbjct: 160 LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEIIISK 213
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
+ D ++ G+++ E G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 52/206 (25%), Positives = 96/206 (46%), Gaps = 29/206 (14%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNL 784
D F K +G GS G V +A ++ G VAVK R ++ + +E +M+ +H N+
Sbjct: 27 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 83
Query: 785 VKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLN--IMIDVALA-LEYLHF 841
V++ ++ D ++ME++ G+L + + R+N + V LA L+ L
Sbjct: 84 VEMYNSYLVGDELWVVMEFLEGGALTD--------IVTHTRMNEEQIAAVCLAVLQALSV 135
Query: 842 GHSTPIIH-------YMVAH-----ISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGV 889
H+ +IH ++ H +SDF ++ ++ + + T +MAPE
Sbjct: 136 LHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS--KEVPRRKXLVGTPYWMAPELIS 193
Query: 890 QGRVSTRGDVYSYGIMLMETFTGKKP 915
+ D++S GIM++E G+ P
Sbjct: 194 RLPYGPEVDIWSLGIMVIEMVDGEPP 219
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 52/206 (25%), Positives = 96/206 (46%), Gaps = 29/206 (14%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNL 784
D F K +G GS G V +A ++ G VAVK R ++ + +E +M+ +H N+
Sbjct: 23 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 79
Query: 785 VKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLN--IMIDVALA-LEYLHF 841
V++ ++ D ++ME++ G+L + + R+N + V LA L+ L
Sbjct: 80 VEMYNSYLVGDELWVVMEFLEGGALTD--------IVTHTRMNEEQIAAVCLAVLQALSV 131
Query: 842 GHSTPIIH-------YMVAH-----ISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGV 889
H+ +IH ++ H +SDF ++ ++ + + T +MAPE
Sbjct: 132 LHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS--KEVPRRKXLVGTPYWMAPELIS 189
Query: 890 QGRVSTRGDVYSYGIMLMETFTGKKP 915
+ D++S GIM++E G+ P
Sbjct: 190 RLPYGPEVDIWSLGIMVIEMVDGEPP 215
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 17/200 (8%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNL 784
D F K +G GS G V +A ++ G VAVK R ++ + +E +M+ +H N+
Sbjct: 34 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 90
Query: 785 VKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHF--- 841
V++ ++ D ++ME++ G+L + + + T M + Q + + V AL LH
Sbjct: 91 VEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNE-EQIAAVCLAVLQALSVLHAQGV 148
Query: 842 ------GHSTPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVST 895
S + H +SDF ++ ++ + + T +MAPE +
Sbjct: 149 IHRDIKSDSILLTHDGRVKLSDFGFCAQVS--KEVPRRKXLVGTPYWMAPELISRLPYGP 206
Query: 896 RGDVYSYGIMLMETFTGKKP 915
D++S GIM++E G+ P
Sbjct: 207 EVDIWSLGIMVIEMVDGEPP 226
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 85/208 (40%), Gaps = 23/208 (11%)
Query: 726 DRFSKNNLLGIGSFGSV----YVARLQDGMEVAVKVFHQRYERALKS-FQDECEVMKRIR 780
+R +G G FG V Y++ M VA+K +++ F E M++
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 69
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH 840
H ++VK+I + + +IME G L + L LD+ + ++ AL YL
Sbjct: 70 HPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE 128
Query: 841 FGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYG 888
S +H +A + DF +++++ L I +MAPE
Sbjct: 129 ---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLP-IKWMAPESI 184
Query: 889 VQGRVSTRGDVYSYGIMLMETFT-GKKP 915
R ++ DV+ +G+ + E G KP
Sbjct: 185 NFRRFTSASDVWMFGVCMWEILMHGVKP 212
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 88/204 (43%), Gaps = 21/204 (10%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQ---DECEVMKRIRH 781
D+F + LG GSFG V + + ++ G A+K+ ++ LK + +E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH- 840
LVK+ + ++ ++MEY+ G + + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHS 159
Query: 841 ----FGHSTP----IIHYMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQG 891
+ P I ++DF AK + G +T L T Y+APE +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEIILSK 213
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
+ D ++ G+++ E G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 88/204 (43%), Gaps = 21/204 (10%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQ---DECEVMKRIRH 781
D+F + LG GSFG V + + ++ G A+K+ ++ LK + +E +++ +
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 95
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH- 840
LVK+ + ++ ++MEY+ G + + L + R + L EYLH
Sbjct: 96 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHS 154
Query: 841 ----FGHSTP----IIHYMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQG 891
+ P I ++DF AK + G +T L T Y+APE +
Sbjct: 155 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEIILSK 208
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
+ D ++ G+++ E G P
Sbjct: 209 GYNKAVDWWALGVLIYEMAAGYPP 232
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 87/204 (42%), Gaps = 31/204 (15%)
Query: 734 LGIGSFGSVYVAR-LQDGMEVAVKVFH--QRYERALKSFQDECEVMKRIRHRNLVKIISA 790
+G G+F V +AR + G EVA+K+ Q +L+ E +MK + H N+VK+
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 791 CSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHY 850
+ LIMEY G + + L + M + R + A++Y H I+H
Sbjct: 83 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYC---HQKRIVHR 138
Query: 851 ------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIG---YMAPEYGVQGRV-- 893
M I+DF + ++ ++ + A G Y APE QG+
Sbjct: 139 DLKAENLLLDADMNIKIADFGFS------NEFTVGGKLDAFCGAPPYAAPEL-FQGKKYD 191
Query: 894 STRGDVYSYGIMLMETFTGKKPTD 917
DV+S G++L +G P D
Sbjct: 192 GPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 88/204 (43%), Gaps = 21/204 (10%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQ---DECEVMKRIRH 781
D+F + LG GSFG V + + ++ G A+K+ ++ LK + +E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH- 840
LVK+ + ++ ++MEY+ G + + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHS 159
Query: 841 ----FGHSTP----IIHYMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQG 891
+ P I ++DF AK + G +T L T Y+APE +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEIILSK 213
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
+ D ++ G+++ E G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 88/204 (43%), Gaps = 21/204 (10%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQ---DECEVMKRIRH 781
D+F + LG GSFG V + + ++ G A+K+ ++ LK + +E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH- 840
LVK+ + ++ ++MEY+ G + + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHS 159
Query: 841 ----FGHSTP----IIHYMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQG 891
+ P I ++DF AK + G +T L T Y+APE +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEIILSK 213
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
+ D ++ G+++ E G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 88/204 (43%), Gaps = 21/204 (10%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQ---DECEVMKRIRH 781
D+F + LG GSFG V + + ++ G A+K+ ++ LK + +E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH- 840
LVK+ + ++ ++MEY+ G + + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARF-YAAQIVLTFEYLHS 159
Query: 841 ----FGHSTP----IIHYMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQG 891
+ P I ++DF AK + G +T L T Y+APE +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEIILSK 213
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
+ D ++ G+++ E G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 76/192 (39%), Gaps = 15/192 (7%)
Query: 726 DRFSKNNLLGIGSFGSVY-VARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNL 784
D + + LG G+FG V+ V G A K +E ++ + E + M +RH L
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 785 VKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALAL------EY 838
V + A +D+ +I E+M G L ++ + + + M V L Y
Sbjct: 111 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNY 170
Query: 839 LHFGHSTPIIHYMVAH-----ISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRV 893
+H I + + DF + L+ + + + T T + APE V
Sbjct: 171 VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV---TTGTAEFAAPEVAEGKPV 227
Query: 894 STRGDVYSYGIM 905
D++S G++
Sbjct: 228 GYYTDMWSVGVL 239
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 97/229 (42%), Gaps = 48/229 (20%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQDGME-VAVKVFHQRYER--ALKSFQDECEVMKRIRHR 782
DR+ + LG G++G VY A E VA+K +E + E ++K ++HR
Sbjct: 34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHR 93
Query: 783 NLVKIISACSNDDFKALIMEYM-----------PNGSLE-------------NRLYSGTC 818
N++++ S ++ LI EY P+ S+ N +S C
Sbjct: 94 NIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRC 153
Query: 819 MLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLA 878
+ + N+++ V+ A E TP++ I DF +A+ + T +
Sbjct: 154 LHRDLKPQNLLLSVSDASE-------TPVL-----KIGDFGLARAFG--IPIRQFTHEII 199
Query: 879 TIGYMAPEYGVQGR-VSTRGDVYS----YGIMLMET--FTGKKPTDEIF 920
T+ Y PE + R ST D++S + MLM+T F G D++F
Sbjct: 200 TLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLF 248
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 88/204 (43%), Gaps = 21/204 (10%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQ---DECEVMKRIRH 781
D+F + LG GSFG V + + ++ G A+K+ ++ LK + +E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH- 840
LVK+ + ++ ++MEY+ G + + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS 159
Query: 841 ----FGHSTP----IIHYMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQG 891
+ P I ++DF AK + G +T L T Y+APE +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEIILSK 213
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
+ D ++ G+++ E G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 88/204 (43%), Gaps = 21/204 (10%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQ---DECEVMKRIRH 781
D+F + LG GSFG V + + ++ G A+K+ ++ LK + +E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH- 840
LVK+ + ++ ++MEY+ G + + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS 159
Query: 841 ----FGHSTP----IIHYMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQG 891
+ P I ++DF AK + G +T L T Y+APE +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEIILSK 213
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
+ D ++ G+++ E G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 85/208 (40%), Gaps = 23/208 (11%)
Query: 726 DRFSKNNLLGIGSFGSV----YVARLQDGMEVAVKVFHQRYERALKS-FQDECEVMKRIR 780
+R +G G FG V Y++ M VA+K +++ F E M++
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 69
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH 840
H ++VK+I + + +IME G L + L LD+ + ++ AL YL
Sbjct: 70 HPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE 128
Query: 841 FGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYG 888
S +H +A + DF +++++ L I +MAPE
Sbjct: 129 ---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP-IKWMAPESI 184
Query: 889 VQGRVSTRGDVYSYGIMLMETFT-GKKP 915
R ++ DV+ +G+ + E G KP
Sbjct: 185 NFRRFTSASDVWMFGVCMWEILMHGVKP 212
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 35/221 (15%)
Query: 727 RFSKNNLLGIGSFGSV-----YVARLQDGMEVAVKVFHQRY-ERALKSFQDECEVMKRIR 780
R+++ +G G++G V +V + + ++ HQ Y +R L+ E +++ R R
Sbjct: 44 RYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLR----EIQILLRFR 99
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALA--LEY 838
H N++ I +A+ Y+ +E LY +L Q N I L L
Sbjct: 100 HENVIGIRDILRASTLEAMRDVYIVQDLMETDLYK---LLKSQQLSNDHICYFLYQILRG 156
Query: 839 LHFGHSTPIIHYMVA------------HISDFSIAKFLNGQ-DQLSMQTQTLATIGYMAP 885
L + HS ++H + I DF +A+ + + D T+ +AT Y AP
Sbjct: 157 LKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAP 216
Query: 886 EYGVQGRVSTRG-DVYSYGIMLMET------FTGKKPTDEI 919
E + + T+ D++S G +L E F GK D++
Sbjct: 217 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 257
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 88/204 (43%), Gaps = 21/204 (10%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQ---DECEVMKRIRH 781
D+F + LG GSFG V + + ++ G A+K+ ++ LK + +E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH- 840
LVK+ + ++ ++MEY+ G + + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS 159
Query: 841 ----FGHSTP----IIHYMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQG 891
+ P I ++DF AK + G +T L T Y+APE +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEIILSK 213
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
+ D ++ G+++ E G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 88/204 (43%), Gaps = 21/204 (10%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQ---DECEVMKRIRH 781
D+F + LG GSFG V + + ++ G A+K+ ++ LK + +E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH- 840
LVK+ + ++ ++MEY+ G + + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS 159
Query: 841 ----FGHSTP----IIHYMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQG 891
+ P I ++DF AK + G +T L T Y+APE +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEIILSK 213
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
+ D ++ G+++ E G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 88/204 (43%), Gaps = 21/204 (10%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQ---DECEVMKRIRH 781
D+F + LG GSFG V + + ++ G A+K+ ++ LK + +E +++ +
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 87
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH- 840
LVK+ + ++ ++MEY+ G + + L + R + L EYLH
Sbjct: 88 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS 146
Query: 841 ----FGHSTP----IIHYMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQG 891
+ P I ++DF AK + G +T L T Y+APE +
Sbjct: 147 LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEIILSK 200
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
+ D ++ G+++ E G P
Sbjct: 201 GYNKAVDWWALGVLIYEMAAGYPP 224
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 85/208 (40%), Gaps = 23/208 (11%)
Query: 726 DRFSKNNLLGIGSFGSV----YVARLQDGMEVAVKVFHQRYERALKS-FQDECEVMKRIR 780
+R +G G FG V Y++ M VA+K +++ F E M++
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 69
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH 840
H ++VK+I + + +IME G L + L LD+ + ++ AL YL
Sbjct: 70 HPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE 128
Query: 841 FGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYG 888
S +H +A + DF +++++ L I +MAPE
Sbjct: 129 ---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLP-IKWMAPESI 184
Query: 889 VQGRVSTRGDVYSYGIMLMETFT-GKKP 915
R ++ DV+ +G+ + E G KP
Sbjct: 185 NFRRFTSASDVWMFGVCMWEILMHGVKP 212
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 88/204 (43%), Gaps = 21/204 (10%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQ---DECEVMKRIRH 781
D+F + LG GSFG V + + ++ G A+K+ ++ LK + +E +++ +
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH- 840
LVK+ + ++ ++MEY+ G + + L + R + L EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS 160
Query: 841 ----FGHSTP----IIHYMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQG 891
+ P I ++DF AK + G +T L T Y+APE +
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEIILSK 214
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
+ D ++ G+++ E G P
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 88/204 (43%), Gaps = 21/204 (10%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQ---DECEVMKRIRH 781
D+F + LG GSFG V + + ++ G A+K+ ++ LK + +E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH- 840
LVK+ + ++ ++MEY+ G + + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS 159
Query: 841 ----FGHSTP----IIHYMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQG 891
+ P I ++DF AK + G +T L T Y+APE +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLXGTPEYLAPEIILSK 213
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
+ D ++ G+++ E G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 84/201 (41%), Gaps = 25/201 (12%)
Query: 734 LGIGSFGSVYVAR-LQDGMEVAVKVFH--QRYERALKSFQDECEVMKRIRHRNLVKIISA 790
+G G+F V +AR + G EVAV++ Q +L+ E +MK + H N+VK+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 791 CSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHY 850
+ L+MEY G + + L + M + R + A++Y H I+H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYC---HQKFIVHR 137
Query: 851 ------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRV--STR 896
M I+DF + ++L + Y APE QG+
Sbjct: 138 DLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPEL-FQGKKYDGPE 193
Query: 897 GDVYSYGIMLMETFTGKKPTD 917
DV+S G++L +G P D
Sbjct: 194 VDVWSLGVILYTLVSGSLPFD 214
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 88/204 (43%), Gaps = 21/204 (10%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQ---DECEVMKRIRH 781
D+F + LG GSFG V + + ++ G A+K+ ++ LK + +E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH- 840
LVK+ + ++ ++MEY+ G + + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS 159
Query: 841 ----FGHSTP----IIHYMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQG 891
+ P I ++DF AK + G +T L T Y+APE +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEIILSK 213
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
+ D ++ G+++ E G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 90/215 (41%), Gaps = 36/215 (16%)
Query: 731 NNLLGIGSFGSVYVARLQD-GMEVAVKVFHQ-RYERALKSFQDECEVMKRIRHRNLVKI- 787
+++LG G+ +V+ R + G A+KVF+ + R + E EV+K++ H+N+VK+
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 788 -ISACSNDDFKALIMEYMPNGSLENRLY--SGTCMLDIFQRLNIMIDVALALEYLHFGHS 844
I + K LIME+ P GSL L S L + L ++ DV + +L
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHL---RE 130
Query: 845 TPIIH----------------YMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAP--- 885
I+H V ++DF A+ L +Q T Y+ P
Sbjct: 131 NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQF---VXLYGTEEYLHPDMY 187
Query: 886 EYGV-----QGRVSTRGDVYSYGIMLMETFTGKKP 915
E V Q + D++S G+ TG P
Sbjct: 188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 21/204 (10%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQ---DECEVMKRIRH 781
D+F + LG GSFG V + + ++ G A+K+ ++ LK + +E + + +
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNF 101
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH- 840
LVK+ + ++ +++EY P G + + L + R + L EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS 160
Query: 841 ----FGHSTP----IIHYMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQG 891
+ P I ++DF AK + G +T L T Y+APE +
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG------RTWXLCGTPEYLAPEIILSK 214
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
+ D ++ G+++ E G P
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 11/127 (8%)
Query: 731 NNLLGIGSFGSVYVA-RLQDG-------MEVAVKVFHQRYERALKSFQDECEVMKRIRHR 782
N LG G+F ++ R + G EV +KV + + +SF + +M ++ H+
Sbjct: 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHK 72
Query: 783 NLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFG 842
+LV C D L+ E++ GSL+ L ++I +L + +A A +HF
Sbjct: 73 HLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAWA---MHFL 129
Query: 843 HSTPIIH 849
+IH
Sbjct: 130 EENTLIH 136
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 95/243 (39%), Gaps = 33/243 (13%)
Query: 704 NDGINSPQAIRRFSYHELLQATDRFSKNNLLGIGSFGSVYVARLQD---GMEVAVKVFHQ 760
N+G+ + ++ Y E + + LG GSFG V+ R++D G + AVK
Sbjct: 53 NEGVLLTEKLKPVDY-EYREEVHWATHQLRLGRGSFGEVH--RMEDKQTGFQCAVKKVRL 109
Query: 761 RYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCML 820
RA +E + +V + A + + ME + GSL + C+
Sbjct: 110 EVFRA-----EELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLP 164
Query: 821 DIFQRLNIMIDVALALEYLHFGHSTPIIHYMV-------------AHISDFSIAKFLN-- 865
+ + + ALE L + HS I+H V A + DF A L
Sbjct: 165 ED----RALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPD 220
Query: 866 --GQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGE 923
G+D L+ T +MAPE + + DV+S M++ G P + F G
Sbjct: 221 GLGKDLLTGDY-IPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGP 279
Query: 924 LSL 926
L L
Sbjct: 280 LCL 282
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 92/213 (43%), Gaps = 28/213 (13%)
Query: 722 LQATDRFSKNNLLGIGSFGSVYVA-RLQDGMEVAVKVFHQRYERALKSFQ-DECEVMKRI 779
+ ++ +F + LG G++ +VY G+ VA+K E S E +MK +
Sbjct: 1 MSSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL 60
Query: 780 RHRNLVKIISACSNDDFKALIMEYMPNG---SLENRLYSGT---CMLDIFQRLNIMIDVA 833
+H N+V++ ++ L+ E+M N +++R T L++ + +
Sbjct: 61 KHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQL--- 117
Query: 834 LALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIG 881
L+ L F H I+H + + DF +A+ ++ + + T+
Sbjct: 118 --LQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFG--IPVNTFSSEVVTLW 173
Query: 882 YMAPEYGVQGRV-STRGDVYSYGIMLMETFTGK 913
Y AP+ + R ST D++S G +L E TGK
Sbjct: 174 YRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 83/201 (41%), Gaps = 25/201 (12%)
Query: 734 LGIGSFGSVYVAR-LQDGMEVAVKVFH--QRYERALKSFQDECEVMKRIRHRNLVKIISA 790
+G G+F V +AR + G EVA+K+ Q +L+ E +MK + H N+VK+
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 79
Query: 791 CSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHY 850
+ LIMEY G + + L + M + R + A++Y H I+H
Sbjct: 80 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYC---HQKRIVHR 135
Query: 851 ------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRV--STR 896
M I+DF + +L + Y APE QG+
Sbjct: 136 DLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT---FCGSPPYAAPEL-FQGKKYDGPE 191
Query: 897 GDVYSYGIMLMETFTGKKPTD 917
DV+S G++L +G P D
Sbjct: 192 VDVWSLGVILYTLVSGSLPFD 212
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 11/127 (8%)
Query: 731 NNLLGIGSFGSVYVA-RLQDG-------MEVAVKVFHQRYERALKSFQDECEVMKRIRHR 782
N LG G+F ++ R + G EV +KV + + +SF + +M ++ H+
Sbjct: 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHK 72
Query: 783 NLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFG 842
+LV C D L+ E++ GSL+ L ++I +L + +A A +HF
Sbjct: 73 HLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAA---MHFL 129
Query: 843 HSTPIIH 849
+IH
Sbjct: 130 EENTLIH 136
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 87/212 (41%), Gaps = 20/212 (9%)
Query: 721 LLQATDRFSKNNLLGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIR 780
++ +DR+ +G G+FG + R + E+ + +R E+ ++ + E + +R
Sbjct: 14 IMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLR 73
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRL-----YSGTCMLDIFQRLNIMIDVALA 835
H N+V+ A++MEY G L R+ +S FQ+L + A
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHA 133
Query: 836 LEYLHFG--------HSTPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEY 887
++ H +P + +S + L+ Q + T+ T Y+APE
Sbjct: 134 MQVCHRDLKLENTLLDGSPAPRLKICAFG-YSKSSVLHSQPK-----DTVGTPAYIAPEV 187
Query: 888 GVQGRVSTR-GDVYSYGIMLMETFTGKKPTDE 918
++ + DV+S G+ L G P ++
Sbjct: 188 LLKKEYDGKVADVWSCGVTLYVMLVGAYPFED 219
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 87/212 (41%), Gaps = 20/212 (9%)
Query: 721 LLQATDRFSKNNLLGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIR 780
++ +DR+ +G G+FG + R + E+ + +R E+ ++ + E + +R
Sbjct: 14 IMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLR 73
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRL-----YSGTCMLDIFQRLNIMIDVALA 835
H N+V+ A++MEY G L R+ +S FQ+L + A
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHA 133
Query: 836 LEYLHFG--------HSTPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEY 887
++ H +P + +S + L+ Q + T+ T Y+APE
Sbjct: 134 MQVCHRDLKLENTLLDGSPAPRLKICAFG-YSKSSVLHSQPK-----STVGTPAYIAPEV 187
Query: 888 GVQGRVSTR-GDVYSYGIMLMETFTGKKPTDE 918
++ + DV+S G+ L G P ++
Sbjct: 188 LLKKEYDGKVADVWSCGVTLYVMLVGAYPFED 219
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 43.9 bits (102), Expect = 5e-04, Method: Composition-based stats.
Identities = 54/215 (25%), Positives = 94/215 (43%), Gaps = 28/215 (13%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQDGME-VAVKVFH-QRYERALKSFQDECEVMKRIRHRN 783
D + ++G G+ V A E VA+K + ++ + ++ E + M + H N
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 784 LVKIISACSNDDFKALIMEYMPNGS----LENRLYSG---TCMLDIFQRLNIMIDVALAL 836
+V ++ D L+M+ + GS +++ + G + +LD I+ +V L
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 837 EYLHFGHSTPIIHYMV------------AHISDFSIAKFL-NGQD--QLSMQTQTLATIG 881
EYLH IH V I+DF ++ FL G D + ++ + T
Sbjct: 130 EYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 186
Query: 882 YMAPEYGVQGR-VSTRGDVYSYGIMLMETFTGKKP 915
+MAPE Q R + D++S+GI +E TG P
Sbjct: 187 WMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 221
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 43.9 bits (102), Expect = 5e-04, Method: Composition-based stats.
Identities = 54/215 (25%), Positives = 94/215 (43%), Gaps = 28/215 (13%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQDGME-VAVKVFH-QRYERALKSFQDECEVMKRIRHRN 783
D + ++G G+ V A E VA+K + ++ + ++ E + M + H N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 784 LVKIISACSNDDFKALIMEYMPNGS----LENRLYSG---TCMLDIFQRLNIMIDVALAL 836
+V ++ D L+M+ + GS +++ + G + +LD I+ +V L
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 837 EYLHFGHSTPIIHYMV------------AHISDFSIAKFL-NGQD--QLSMQTQTLATIG 881
EYLH IH V I+DF ++ FL G D + ++ + T
Sbjct: 135 EYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 191
Query: 882 YMAPEYGVQGR-VSTRGDVYSYGIMLMETFTGKKP 915
+MAPE Q R + D++S+GI +E TG P
Sbjct: 192 WMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 226
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 93/242 (38%), Gaps = 31/242 (12%)
Query: 704 NDGINSPQAIRRFSYHELLQATDRFSKNNLLGIGSFGSVYVARLQD---GMEVAVKVFHQ 760
N+G+ + ++ Y E + + LG GSFG V+ R++D G + AVK
Sbjct: 72 NEGVLLTEKLKPVDY-EYREEVHWATHQLRLGRGSFGEVH--RMEDKQTGFQCAVKKVRL 128
Query: 761 RYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCML 820
RA +E + +V + A + + ME + GSL + C+
Sbjct: 129 EVFRA-----EELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLP 183
Query: 821 DIFQRLNIMIDVALALEYLHFGHSTPIIHYMVAH-----ISDFSIAKFLNGQDQLSMQTQ 875
+ + + ALE L + HS I+H V SD S A + + +Q
Sbjct: 184 ED----RALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPD 239
Query: 876 TLA-----------TIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGEL 924
L T +MAPE + + DV+S M++ G P + F G L
Sbjct: 240 GLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPL 299
Query: 925 SL 926
L
Sbjct: 300 CL 301
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 43.5 bits (101), Expect = 5e-04, Method: Composition-based stats.
Identities = 65/274 (23%), Positives = 111/274 (40%), Gaps = 29/274 (10%)
Query: 734 LGIGSFGSVYVARLQDGME-VAVKVFHQRYERAL---KSFQDECEVMKRIRHRNLVKIIS 789
LG G++G V +A + E VAVK+ + RA+ ++ + E + K + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 790 ACSNDDFKALIMEYMPNGSLENRLYSGTCMLDI-FQRL--NIMIDVALALEYLHFGHSTP 846
+ + L +EY G L +R+ M + QR +M V YLH
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH---GIG 124
Query: 847 IIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVS 894
I H + ISDF +A ++ + + T+ Y+APE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 895 TRG-DVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERY 953
DV+S GI+L G+ P D+ S W ++ + ID+ L+ +
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 244
Query: 954 FAAKEQSLLSILNLATECTIESPGKRINAREIVT 987
+ ++I ++ + P K+ R VT
Sbjct: 245 LVENPSARITIPDIKKDRWYNKPLKKGAKRPRVT 278
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 43.5 bits (101), Expect = 5e-04, Method: Composition-based stats.
Identities = 65/274 (23%), Positives = 111/274 (40%), Gaps = 29/274 (10%)
Query: 734 LGIGSFGSVYVARLQDGME-VAVKVFHQRYERAL---KSFQDECEVMKRIRHRNLVKIIS 789
LG G++G V +A + E VAVK+ + RA+ ++ + E + K + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDCPENIKKEIXINKMLNHENVVKFYG 71
Query: 790 ACSNDDFKALIMEYMPNGSLENRLYSGTCMLDI-FQRL--NIMIDVALALEYLHFGHSTP 846
+ + L +EY G L +R+ M + QR +M V YL H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YL---HGIG 124
Query: 847 IIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVS 894
I H + ISDF +A ++ + + T+ Y+APE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 895 TRG-DVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERY 953
DV+S GI+L G+ P D+ S W ++ + ID+ L+ +
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 244
Query: 954 FAAKEQSLLSILNLATECTIESPGKRINAREIVT 987
+ ++I ++ + P K+ R VT
Sbjct: 245 LVENPSARITIPDIKKDRWYNKPLKKGAKRPRVT 278
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 43.5 bits (101), Expect = 5e-04, Method: Composition-based stats.
Identities = 40/209 (19%), Positives = 83/209 (39%), Gaps = 25/209 (11%)
Query: 725 TDRFSKNNLLGIGSFGSVY-VARLQDGMEVAVKVFHQR--YERALKSFQDECEVMKRIRH 781
+D + LG G+F V G+E A K+ + + R + + E + ++++H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHF 841
N+V++ + + F L+ + + G L+ + + + + LE + +
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGG----ELFEDIVAREFYSEADASHCIQQILESIAY 120
Query: 842 GHSTPIIHY---------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPE 886
HS I+H ++DF +A +N + T GY++PE
Sbjct: 121 CHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTPGYLSPE 177
Query: 887 YGVQGRVSTRGDVYSYGIMLMETFTGKKP 915
+ S D+++ G++L G P
Sbjct: 178 VLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 43.5 bits (101), Expect = 5e-04, Method: Composition-based stats.
Identities = 40/209 (19%), Positives = 83/209 (39%), Gaps = 25/209 (11%)
Query: 725 TDRFSKNNLLGIGSFGSVY-VARLQDGMEVAVKVFHQR--YERALKSFQDECEVMKRIRH 781
+D + LG G+F V G+E A K+ + + R + + E + ++++H
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHF 841
N+V++ + + F L+ + + G L+ + + + + LE + +
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGG----ELFEDIVAREFYSEADASHCIQQILESIAY 119
Query: 842 GHSTPIIHY---------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPE 886
HS I+H ++DF +A +N + T GY++PE
Sbjct: 120 CHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTPGYLSPE 176
Query: 887 YGVQGRVSTRGDVYSYGIMLMETFTGKKP 915
+ S D+++ G++L G P
Sbjct: 177 VLKKDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 43.5 bits (101), Expect = 5e-04, Method: Composition-based stats.
Identities = 40/209 (19%), Positives = 83/209 (39%), Gaps = 25/209 (11%)
Query: 725 TDRFSKNNLLGIGSFGSVY-VARLQDGMEVAVKVFHQR--YERALKSFQDECEVMKRIRH 781
+D + LG G+F V G+E A K+ + + R + + E + ++++H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHF 841
N+V++ + + F L+ + + G L+ + + + + LE + +
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGG----ELFEDIVAREFYSEADASHCIQQILESIAY 120
Query: 842 GHSTPIIHY---------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPE 886
HS I+H ++DF +A +N + T GY++PE
Sbjct: 121 CHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTPGYLSPE 177
Query: 887 YGVQGRVSTRGDVYSYGIMLMETFTGKKP 915
+ S D+++ G++L G P
Sbjct: 178 VLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 90/215 (41%), Gaps = 36/215 (16%)
Query: 731 NNLLGIGSFGSVYVARLQD-GMEVAVKVFHQ-RYERALKSFQDECEVMKRIRHRNLVKI- 787
+++LG G+ +V+ R + G A+KVF+ + R + E EV+K++ H+N+VK+
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 788 -ISACSNDDFKALIMEYMPNGSLENRLY--SGTCMLDIFQRLNIMIDVALALEYLHFGHS 844
I + K LIME+ P GSL L S L + L ++ DV + +L
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHL---RE 130
Query: 845 TPIIH----------------YMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAP--- 885
I+H V ++DF A+ L +Q T Y+ P
Sbjct: 131 NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQF---VSLYGTEEYLHPDMY 187
Query: 886 EYGV-----QGRVSTRGDVYSYGIMLMETFTGKKP 915
E V Q + D++S G+ TG P
Sbjct: 188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 43.5 bits (101), Expect = 6e-04, Method: Composition-based stats.
Identities = 65/274 (23%), Positives = 111/274 (40%), Gaps = 29/274 (10%)
Query: 734 LGIGSFGSVYVARLQDGME-VAVKVFHQRYERAL---KSFQDECEVMKRIRHRNLVKIIS 789
LG G++G V +A + E VAVK+ + RA+ ++ + E + K + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDCPENIKKEIXINKMLNHENVVKFYG 71
Query: 790 ACSNDDFKALIMEYMPNGSLENRLYSGTCMLDI-FQRL--NIMIDVALALEYLHFGHSTP 846
+ + L +EY G L +R+ M + QR +M V YL H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YL---HGIG 124
Query: 847 IIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVS 894
I H + ISDF +A ++ + + T+ Y+APE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 895 TRG-DVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERY 953
DV+S GI+L G+ P D+ S W ++ + ID+ L+ +
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 244
Query: 954 FAAKEQSLLSILNLATECTIESPGKRINAREIVT 987
+ ++I ++ + P K+ R VT
Sbjct: 245 LVENPSARITIPDIKKDRWYNKPLKKGAKRPRVT 278
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 94/227 (41%), Gaps = 34/227 (14%)
Query: 716 FSYHELLQATDRFSKNNLLGIGSFGSVY-VARLQDGMEVAVKVFHQRYERALKSFQDECE 774
+ Y+++L+ LG G+FG V+ G K + Y + ++E
Sbjct: 50 YDYYDILEE---------LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEIS 100
Query: 775 VMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVAL 834
+M ++ H L+ + A + LI+E++ G L +R+ + + + +N M
Sbjct: 101 IMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACE 160
Query: 835 ALEYLHFGHSTPIIHYMV--------------AHISDFSIAKFLNGQDQLSMQTQTLATI 880
L+++H HS I+H + I DF +A LN + + + T AT
Sbjct: 161 GLKHMH-EHS--IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKV---TTATA 214
Query: 881 GYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLS 927
+ APE + V D+++ G++ +G P F GE L
Sbjct: 215 EFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSP----FAGEDDLE 257
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 43.5 bits (101), Expect = 6e-04, Method: Composition-based stats.
Identities = 58/246 (23%), Positives = 105/246 (42%), Gaps = 41/246 (16%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERAL--KSFQDECEVMKRIRHR 782
+++ K +G GS+G V+ R +D G VA+K F + + + K E ++K+++H
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 783 NLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQR---LNIMIDVAL-ALEY 838
NLV ++ L+ EY + L LD +QR +++ + L+
Sbjct: 63 NLVNLLEVFRRKRRLHLVFEYCDHTVLHE--------LDRYQRGVPEHLVKSITWQTLQA 114
Query: 839 LHFGHSTPIIH------------YMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPE 886
++F H IH + V + DF A+ L G +AT Y +PE
Sbjct: 115 VNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPS--DYYDDEVATRWYRSPE 172
Query: 887 YGV-QGRVSTRGDVYSYGIMLMETFT------GKKPTDEIFIGELSLSRWVNDLLPISVM 939
V + DV++ G + E + GK D++++ + + + DL+P
Sbjct: 173 LLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYL----IRKTLGDLIPRH-Q 227
Query: 940 EVIDTN 945
+V TN
Sbjct: 228 QVFSTN 233
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 106/267 (39%), Gaps = 49/267 (18%)
Query: 688 LKWKLIRCWKSITGSSNDGINSPQAIRRFSY-HELLQATDRFSKNNLLGIGSFGSVYVA- 745
++WK++ + I G++ I+ Q Y H+ +R S LG G+FG V A
Sbjct: 7 VQWKVV---EEINGNNXVXIDPTQ----LPYDHKWEFPRNRLSFGKTLGAGAFGKVVEAT 59
Query: 746 -----RLQDGMEVAVKVF----HQRYERALKSFQDECEVMKRI-RHRNLVKIISACSNDD 795
+ M VAVK+ H AL S E +V+ + H N+V ++ AC+
Sbjct: 60 AYGLIKSDAAMTVAVKMLKPSAHLTEREALMS---ELKVLSYLGNHMNIVNLLGACTIGG 116
Query: 796 FKALIMEYMPNGSLENRLY----SGTC-------------MLDIFQRLNIMIDVALALEY 838
+I EY G L N L S C LD+ L+ VA + +
Sbjct: 117 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAF 176
Query: 839 LH---------FGHSTPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGV 889
L + + H + I DF +A+ + ++ + +MAPE
Sbjct: 177 LASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIF 236
Query: 890 QGRVSTRGDVYSYGIMLMETFT-GKKP 915
+ DV+SYGI L E F+ G P
Sbjct: 237 NCVYTFESDVWSYGIFLWELFSLGSSP 263
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 43.5 bits (101), Expect = 7e-04, Method: Composition-based stats.
Identities = 54/205 (26%), Positives = 87/205 (42%), Gaps = 29/205 (14%)
Query: 734 LGIGSFGSVYVARLQDGME-VAVKVFHQRYERAL---KSFQDECEVMKRIRHRNLVKIIS 789
LG G++G V +A + E VAVK+ + RA+ ++ + E + K + H N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDCPENIKKEIXINKMLNHENVVKFYG 72
Query: 790 ACSNDDFKALIMEYMPNGSLENRLYSGTCMLDI-FQRL--NIMIDVALALEYLHFGHSTP 846
+ + L +EY G L +R+ M + QR +M V YL H
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YL---HGIG 125
Query: 847 IIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVS 894
I H + ISDF +A ++ + + T+ Y+APE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 185
Query: 895 TRG-DVYSYGIMLMETFTGKKPTDE 918
DV+S GI+L G+ P D+
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 43.1 bits (100), Expect = 7e-04, Method: Composition-based stats.
Identities = 70/296 (23%), Positives = 119/296 (40%), Gaps = 31/296 (10%)
Query: 734 LGIGSFGSVYVARLQDGME-VAVKVFHQRYERAL---KSFQDECEVMKRIRHRNLVKIIS 789
LG G++G V +A + E VAVK+ + RA+ ++ + E + K + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 790 ACSNDDFKALIMEYMPNGSLENRLYSGTCMLDI-FQRL--NIMIDVALALEYLHFGHSTP 846
+ + L +EY G L +R+ M + QR +M V YLH
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH---GIG 124
Query: 847 IIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVS 894
I H + ISDF +A ++ + + T+ Y+APE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 895 TRG-DVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERY 953
DV+S GI+L G+ P D+ S W ++ + ID+ L+ +
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 244
Query: 954 FAAKEQSLLSILNLATECTIESPGKRINAREIVT--GLLKIRDTLVKSVGMNTSFS 1007
+ ++I ++ + P K+ R VT G+ + K + N FS
Sbjct: 245 LVENPSARITIPDIKKDRWYNKPLKKGAKRPRVTSGGVSESPSGFSKHIQSNLDFS 300
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 85/208 (40%), Gaps = 23/208 (11%)
Query: 726 DRFSKNNLLGIGSFGSV----YVARLQDGMEVAVKVFHQRYERALKS-FQDECEVMKRIR 780
+R +G G FG V Y++ M VA+K +++ F E M++
Sbjct: 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 449
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH 840
H ++VK+I + + +IME G L + L LD+ + ++ AL YL
Sbjct: 450 HPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE 508
Query: 841 FGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYG 888
S +H +A + DF +++++ L I +MAPE
Sbjct: 509 ---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP-IKWMAPESI 564
Query: 889 VQGRVSTRGDVYSYGIMLMETFT-GKKP 915
R ++ DV+ +G+ + E G KP
Sbjct: 565 NFRRFTSASDVWMFGVCMWEILMHGVKP 592
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 85/208 (40%), Gaps = 23/208 (11%)
Query: 726 DRFSKNNLLGIGSFGSV----YVARLQDGMEVAVKVFHQRYERALKS-FQDECEVMKRIR 780
+R +G G FG V Y++ + VA+K +++ F E M++
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 69
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH 840
H ++VK+I + + +IME G L + L LD+ + ++ AL YL
Sbjct: 70 HPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE 128
Query: 841 FGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYG 888
S +H +A + DF +++++ L I +MAPE
Sbjct: 129 ---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP-IKWMAPESI 184
Query: 889 VQGRVSTRGDVYSYGIMLMETFT-GKKP 915
R ++ DV+ +G+ + E G KP
Sbjct: 185 NFRRFTSASDVWMFGVCMWEILMHGVKP 212
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 83/215 (38%), Gaps = 26/215 (12%)
Query: 721 LLQATDRFSKNNLLGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIR 780
++ +DR+ +G G+FG + R + E+ + +R ++ Q E + +R
Sbjct: 15 IMHDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLR 74
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH 840
H N+V+ A+IMEY G L R+ C F L +
Sbjct: 75 HPNIVRFKEVILTPTHLAIIMEYASGGELYERI----CNAGRFSEDEARFFFQQLLSGVS 130
Query: 841 FGHSTPIIHYMVA--------------HISDFSIAK--FLNGQDQLSMQTQTLATIGYMA 884
+ HS I H + I DF +K L+ Q + T+ T Y+A
Sbjct: 131 YCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK-----STVGTPAYIA 185
Query: 885 PEYGVQGRVSTR-GDVYSYGIMLMETFTGKKPTDE 918
PE ++ + DV+S G+ L G P ++
Sbjct: 186 PEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFED 220
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 85/208 (40%), Gaps = 23/208 (11%)
Query: 726 DRFSKNNLLGIGSFGSV----YVARLQDGMEVAVKVFHQRYERALKS-FQDECEVMKRIR 780
+R +G G FG V Y++ M VA+K +++ F E M++
Sbjct: 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 449
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH 840
H ++VK+I + + +IME G L + L LD+ + ++ AL YL
Sbjct: 450 HPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE 508
Query: 841 FGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYG 888
S +H +A + DF +++++ L I +MAPE
Sbjct: 509 ---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLP-IKWMAPESI 564
Query: 889 VQGRVSTRGDVYSYGIMLMETFT-GKKP 915
R ++ DV+ +G+ + E G KP
Sbjct: 565 NFRRFTSASDVWMFGVCMWEILMHGVKP 592
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 85/200 (42%), Gaps = 23/200 (11%)
Query: 733 LLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKSFQDECEVM-------KRIRHRNL 784
++G GSFG V +AR + + + AVKV ++ A+ ++E +M K ++H L
Sbjct: 45 VIGKGSFGKVLLARHKAEEVFYAVKVLQKK---AILKKKEEKHIMSERNVLLKNVKHPFL 101
Query: 785 VKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH---- 840
V + + D +++Y+ G L L C L+ R ++A AL YLH
Sbjct: 102 VGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARF-YAAEIASALGYLHSLNI 160
Query: 841 -FGHSTP--IIHYMVAHI--SDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVST 895
+ P I+ HI +DF + K + S + T Y+APE +
Sbjct: 161 VYRDLKPENILLDSQGHIVLTDFGLCK--ENIEHNSTTSTFCGTPEYLAPEVLHKQPYDR 218
Query: 896 RGDVYSYGIMLMETFTGKKP 915
D + G +L E G P
Sbjct: 219 TVDWWCLGAVLYEMLYGLPP 238
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 85/208 (40%), Gaps = 23/208 (11%)
Query: 726 DRFSKNNLLGIGSFGSV----YVARLQDGMEVAVKVFHQRYERALKS-FQDECEVMKRIR 780
+R +G G FG V Y++ + VA+K +++ F E M++
Sbjct: 38 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 97
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH 840
H ++VK+I + + +IME G L + L LD+ + ++ AL YL
Sbjct: 98 HPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE 156
Query: 841 FGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYG 888
S +H +A + DF +++++ L I +MAPE
Sbjct: 157 ---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP-IKWMAPESI 212
Query: 889 VQGRVSTRGDVYSYGIMLMETFT-GKKP 915
R ++ DV+ +G+ + E G KP
Sbjct: 213 NFRRFTSASDVWMFGVCMWEILMHGVKP 240
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 88/204 (43%), Gaps = 21/204 (10%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQ---DECEVMKRIRH 781
D+F + LG GSFG V + + ++ G A+K+ ++ LK + +E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH- 840
LVK+ + ++ ++MEY+ G + + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS 159
Query: 841 ----FGHSTP----IIHYMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQG 891
+ P I ++DF AK + G +T L T Y+APE +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEIILSK 213
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
+ D ++ G+++ + G P
Sbjct: 214 GYNKAVDWWALGVLIYQMAAGYPP 237
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 43.1 bits (100), Expect = 8e-04, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 12/113 (10%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRI--RHRNLVKIISAC 791
+G G FG V+ + + G EVAVK+F R ER S+ E E+ + + RH N++ I+A
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIFSSREER---SWFREAEIYQTVMLRHENILGFIAAD 67
Query: 792 SNDDFK----ALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH 840
+ D+ L+ +Y +GSL + L T ++ + + + A L +LH
Sbjct: 68 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE--GMIKLALSTASGLAHLH 118
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 43.1 bits (100), Expect = 8e-04, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 12/113 (10%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRI--RHRNLVKIISAC 791
+G G FG V+ + + G EVAVK+F R ER S+ E E+ + + RH N++ I+A
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIFSSREER---SWFREAEIYQTVMLRHENILGFIAAD 66
Query: 792 SNDDFK----ALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH 840
+ D+ L+ +Y +GSL + L T ++ + + + A L +LH
Sbjct: 67 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE--GMIKLALSTASGLAHLH 117
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 43.1 bits (100), Expect = 8e-04, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 12/113 (10%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRI--RHRNLVKIISAC 791
+G G FG V+ + + G EVAVK+F R ER S+ E E+ + + RH N++ I+A
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIFSSREER---SWFREAEIYQTVMLRHENILGFIAAD 92
Query: 792 SNDDFK----ALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH 840
+ D+ L+ +Y +GSL + L T ++ + + + A L +LH
Sbjct: 93 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE--GMIKLALSTASGLAHLH 143
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 43.1 bits (100), Expect = 8e-04, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 12/113 (10%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRI--RHRNLVKIISAC 791
+G G FG V+ + + G EVAVK+F R ER S+ E E+ + + RH N++ I+A
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIFSSREER---SWFREAEIYQTVMLRHENILGFIAAD 72
Query: 792 SNDDFK----ALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH 840
+ D+ L+ +Y +GSL + L T ++ + + + A L +LH
Sbjct: 73 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE--GMIKLALSTASGLAHLH 123
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 43.1 bits (100), Expect = 8e-04, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 12/113 (10%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRI--RHRNLVKIISAC 791
+G G FG V+ + + G EVAVK+F R ER S+ E E+ + + RH N++ I+A
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIFSSREER---SWFREAEIYQTVMLRHENILGFIAAD 69
Query: 792 SNDDFK----ALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH 840
+ D+ L+ +Y +GSL + L T ++ + + + A L +LH
Sbjct: 70 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE--GMIKLALSTASGLAHLH 120
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 43.1 bits (100), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 85/208 (40%), Gaps = 23/208 (11%)
Query: 726 DRFSKNNLLGIGSFGSV----YVARLQDGMEVAVKVFHQRYERALKS-FQDECEVMKRIR 780
+R +G G FG V Y++ + VA+K +++ F E M++
Sbjct: 15 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 74
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH 840
H ++VK+I + + +IME G L + L LD+ + ++ AL YL
Sbjct: 75 HPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE 133
Query: 841 FGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYG 888
S +H +A + DF +++++ L I +MAPE
Sbjct: 134 ---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP-IKWMAPESI 189
Query: 889 VQGRVSTRGDVYSYGIMLMETFT-GKKP 915
R ++ DV+ +G+ + E G KP
Sbjct: 190 NFRRFTSASDVWMFGVCMWEILMHGVKP 217
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 106/267 (39%), Gaps = 49/267 (18%)
Query: 688 LKWKLIRCWKSITGSSNDGINSPQAIRRFSY-HELLQATDRFSKNNLLGIGSFGSVYVA- 745
++WK++ + I G++ I+ Q Y H+ +R S LG G+FG V A
Sbjct: 14 VQWKVV---EEINGNNYVYIDPTQ----LPYDHKWEFPRNRLSFGKTLGAGAFGKVVEAT 66
Query: 746 -----RLQDGMEVAVKVF----HQRYERALKSFQDECEVMKRI-RHRNLVKIISACSNDD 795
+ M VAVK+ H AL S E +V+ + H N+V ++ AC+
Sbjct: 67 AYGLIKSDAAMTVAVKMLKPSAHLTEREALMS---ELKVLSYLGNHMNIVNLLGACTIGG 123
Query: 796 FKALIMEYMPNGSLENRLY----SGTC-------------MLDIFQRLNIMIDVALALEY 838
+I EY G L N L S C LD+ L+ VA + +
Sbjct: 124 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAF 183
Query: 839 LH---------FGHSTPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGV 889
L + + H + I DF +A+ + ++ + +MAPE
Sbjct: 184 LASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIF 243
Query: 890 QGRVSTRGDVYSYGIMLMETFT-GKKP 915
+ DV+SYGI L E F+ G P
Sbjct: 244 NCVYTFESDVWSYGIFLWELFSLGSSP 270
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 85/208 (40%), Gaps = 23/208 (11%)
Query: 726 DRFSKNNLLGIGSFGSV----YVARLQDGMEVAVKVFHQRYERALKS-FQDECEVMKRIR 780
+R +G G FG V Y++ + VA+K +++ F E M++
Sbjct: 13 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 72
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH 840
H ++VK+I + + +IME G L + L LD+ + ++ AL YL
Sbjct: 73 HPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE 131
Query: 841 FGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYG 888
S +H +A + DF +++++ L I +MAPE
Sbjct: 132 ---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP-IKWMAPESI 187
Query: 889 VQGRVSTRGDVYSYGIMLMETFT-GKKP 915
R ++ DV+ +G+ + E G KP
Sbjct: 188 NFRRFTSASDVWMFGVCMWEILMHGVKP 215
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 85/208 (40%), Gaps = 23/208 (11%)
Query: 726 DRFSKNNLLGIGSFGSV----YVARLQDGMEVAVKVFHQRYERALKS-FQDECEVMKRIR 780
+R +G G FG V Y++ + VA+K +++ F E M++
Sbjct: 12 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 71
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH 840
H ++VK+I + + +IME G L + L LD+ + ++ AL YL
Sbjct: 72 HPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE 130
Query: 841 FGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYG 888
S +H +A + DF +++++ L I +MAPE
Sbjct: 131 ---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP-IKWMAPESI 186
Query: 889 VQGRVSTRGDVYSYGIMLMETFT-GKKP 915
R ++ DV+ +G+ + E G KP
Sbjct: 187 NFRRFTSASDVWMFGVCMWEILMHGVKP 214
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 20/137 (14%)
Query: 725 TDRFSKNNLLGIGSFGSVY--VARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRI--- 779
T F + +G G FGSV+ V RL DG A+K R ++ L DE ++ +
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIK----RSKKPLAGSVDEQNALREVYAH 64
Query: 780 ----RHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRL---NIMIDV 832
+H ++V+ SA + DD + EY GSL + + ++ F+ ++++ V
Sbjct: 65 AVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQV 124
Query: 833 ALALEYLHFGHSTPIIH 849
L Y+ HS ++H
Sbjct: 125 GRGLRYI---HSMSLVH 138
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 20/137 (14%)
Query: 725 TDRFSKNNLLGIGSFGSVY--VARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRI--- 779
T F + +G G FGSV+ V RL DG A+K R ++ L DE ++ +
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIK----RSKKPLAGSVDEQNALREVYAH 60
Query: 780 ----RHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRL---NIMIDV 832
+H ++V+ SA + DD + EY GSL + + ++ F+ ++++ V
Sbjct: 61 AVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQV 120
Query: 833 ALALEYLHFGHSTPIIH 849
L Y+ HS ++H
Sbjct: 121 GRGLRYI---HSMSLVH 134
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 85/208 (40%), Gaps = 23/208 (11%)
Query: 726 DRFSKNNLLGIGSFGSV----YVARLQDGMEVAVKVFHQRYERALKS-FQDECEVMKRIR 780
+R +G G FG V Y++ + VA+K +++ F E M++
Sbjct: 7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 66
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH 840
H ++VK+I + + +IME G L + L LD+ + ++ AL YL
Sbjct: 67 HPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE 125
Query: 841 FGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYG 888
S +H +A + DF +++++ L I +MAPE
Sbjct: 126 ---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP-IKWMAPESI 181
Query: 889 VQGRVSTRGDVYSYGIMLMETFT-GKKP 915
R ++ DV+ +G+ + E G KP
Sbjct: 182 NFRRFTSASDVWMFGVCMWEILMHGVKP 209
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 20/137 (14%)
Query: 725 TDRFSKNNLLGIGSFGSVY--VARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRI--- 779
T F + +G G FGSV+ V RL DG A+K R ++ L DE ++ +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIK----RSKKPLAGSVDEQNALREVYAH 62
Query: 780 ----RHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRL---NIMIDV 832
+H ++V+ SA + DD + EY GSL + + ++ F+ ++++ V
Sbjct: 63 AVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQV 122
Query: 833 ALALEYLHFGHSTPIIH 849
L Y+ HS ++H
Sbjct: 123 GRGLRYI---HSMSLVH 136
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 20/137 (14%)
Query: 725 TDRFSKNNLLGIGSFGSVY--VARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRI--- 779
T F + +G G FGSV+ V RL DG A+K R ++ L DE ++ +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIK----RSKKPLAGSVDEQNALREVYAH 62
Query: 780 ----RHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRL---NIMIDV 832
+H ++V+ SA + DD + EY GSL + + ++ F+ ++++ V
Sbjct: 63 AVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQV 122
Query: 833 ALALEYLHFGHSTPIIH 849
L Y+ HS ++H
Sbjct: 123 GRGLRYI---HSMSLVH 136
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 91/235 (38%), Gaps = 41/235 (17%)
Query: 719 HELLQATDRFSKNNLLGIGSFGSVYVA------RLQDGMEVAVKVF----HQRYERALKS 768
H+ +R S LG G+FG V A + M VAVK+ H AL S
Sbjct: 16 HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMS 75
Query: 769 FQDECEVMKRI-RHRNLVKIISACSNDDFKALIMEYMPNGSLENRLY----SGTC----- 818
E +V+ + H N+V ++ AC+ +I EY G L N L S C
Sbjct: 76 ---ELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSP 132
Query: 819 --------MLDIFQRLNIMIDVALALEYLH---------FGHSTPIIHYMVAHISDFSIA 861
LD+ L+ VA + +L + + H + I DF +A
Sbjct: 133 AIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLA 192
Query: 862 KFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKP 915
+ + ++ + +MAPE + DV+SYGI L E F+ G P
Sbjct: 193 RDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 247
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 90/213 (42%), Gaps = 30/213 (14%)
Query: 722 LQATDRFSKNNLLGIGSFGSVYVARLQDG--MEVAVKVFHQRYERALKSFQDECEVMKRI 779
+Q TD + +G+GS+ SV + ME AVK+ +++ + +E E++ R
Sbjct: 18 IQFTDGYEVKEDIGVGSY-SVCKRCIHKATNMEFAVKII----DKSKRDPTEEIEILLRY 72
Query: 780 -RHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEY 838
+H N++ + + + ++ E M G L +++ + + ++ + +EY
Sbjct: 73 GQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSE-REASAVLFTITKTVEY 131
Query: 839 LHFGHSTPIIHYMVA----------------HISDFSIAKFLNGQDQLSMQTQTLATIGY 882
LH + ++H + I DF AK L ++ L M T +
Sbjct: 132 LH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTP--CYTANF 186
Query: 883 MAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKP 915
+APE + D++S G++L TG P
Sbjct: 187 VAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 65/274 (23%), Positives = 111/274 (40%), Gaps = 29/274 (10%)
Query: 734 LGIGSFGSVYVARLQDGME-VAVKVFHQRYERAL---KSFQDECEVMKRIRHRNLVKIIS 789
LG G++G V +A + E VAVK+ + RA+ ++ + E + K + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 790 ACSNDDFKALIMEYMPNGSLENRLYSGTCMLDI-FQRL--NIMIDVALALEYLHFGHSTP 846
+ + L +EY G L +R+ M + QR +M V YL H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YL---HGIG 124
Query: 847 IIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVS 894
I H + ISDF +A ++ + + T+ Y+APE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 895 TRG-DVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERY 953
DV+S GI+L G+ P D+ S W ++ + ID+ L+ +
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 244
Query: 954 FAAKEQSLLSILNLATECTIESPGKRINAREIVT 987
+ ++I ++ + P K+ R VT
Sbjct: 245 LVENPSARITIPDIKKDRWYNKPLKKGAKRPRVT 278
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 65/274 (23%), Positives = 111/274 (40%), Gaps = 29/274 (10%)
Query: 734 LGIGSFGSVYVARLQDGME-VAVKVFHQRYERAL---KSFQDECEVMKRIRHRNLVKIIS 789
LG G++G V +A + E VAVK+ + RA+ ++ + E + K + H N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 790 ACSNDDFKALIMEYMPNGSLENRLYSGTCMLDI-FQRL--NIMIDVALALEYLHFGHSTP 846
+ + L +EY G L +R+ M + QR +M V YL H
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YL---HGIG 125
Query: 847 IIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVS 894
I H + ISDF +A ++ + + T+ Y+APE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 895 TRG-DVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERY 953
DV+S GI+L G+ P D+ S W ++ + ID+ L+ +
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 245
Query: 954 FAAKEQSLLSILNLATECTIESPGKRINAREIVT 987
+ ++I ++ + P K+ R VT
Sbjct: 246 LVENPSARITIPDIKKDRWYNKPLKKGAKRPRVT 279
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 65/274 (23%), Positives = 111/274 (40%), Gaps = 29/274 (10%)
Query: 734 LGIGSFGSVYVARLQDGME-VAVKVFHQRYERAL---KSFQDECEVMKRIRHRNLVKIIS 789
LG G++G V +A + E VAVK+ + RA+ ++ + E + K + H N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 790 ACSNDDFKALIMEYMPNGSLENRLYSGTCMLDI-FQRL--NIMIDVALALEYLHFGHSTP 846
+ + L +EY G L +R+ M + QR +M V YL H
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YL---HGIG 125
Query: 847 IIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVS 894
I H + ISDF +A ++ + + T+ Y+APE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 895 TRG-DVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERY 953
DV+S GI+L G+ P D+ S W ++ + ID+ L+ +
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 245
Query: 954 FAAKEQSLLSILNLATECTIESPGKRINAREIVT 987
+ ++I ++ + P K+ R VT
Sbjct: 246 LVENPSARITIPDIKKDRWYNKPLKKGAKRPRVT 279
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 65/274 (23%), Positives = 111/274 (40%), Gaps = 29/274 (10%)
Query: 734 LGIGSFGSVYVARLQDGME-VAVKVFHQRYERAL---KSFQDECEVMKRIRHRNLVKIIS 789
LG G++G V +A + E VAVK+ + RA+ ++ + E + K + H N+VK
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDCPENIKKEICINKMLNHENVVKFYG 70
Query: 790 ACSNDDFKALIMEYMPNGSLENRLYSGTCMLDI-FQRL--NIMIDVALALEYLHFGHSTP 846
+ + L +EY G L +R+ M + QR +M V YL H
Sbjct: 71 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YL---HGIG 123
Query: 847 IIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVS 894
I H + ISDF +A ++ + + T+ Y+APE +
Sbjct: 124 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 183
Query: 895 TRG-DVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERY 953
DV+S GI+L G+ P D+ S W ++ + ID+ L+ +
Sbjct: 184 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 243
Query: 954 FAAKEQSLLSILNLATECTIESPGKRINAREIVT 987
+ ++I ++ + P K+ R VT
Sbjct: 244 LVENPSARITIPDIKKDRWYNKPLKKGAKRPRVT 277
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 65/274 (23%), Positives = 111/274 (40%), Gaps = 29/274 (10%)
Query: 734 LGIGSFGSVYVARLQDGME-VAVKVFHQRYERAL---KSFQDECEVMKRIRHRNLVKIIS 789
LG G++G V +A + E VAVK+ + RA+ ++ + E + K + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 790 ACSNDDFKALIMEYMPNGSLENRLYSGTCMLDI-FQRL--NIMIDVALALEYLHFGHSTP 846
+ + L +EY G L +R+ M + QR +M V YL H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YL---HGIG 124
Query: 847 IIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVS 894
I H + ISDF +A ++ + + T+ Y+APE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 895 TRG-DVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERY 953
DV+S GI+L G+ P D+ S W ++ + ID+ L+ +
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 244
Query: 954 FAAKEQSLLSILNLATECTIESPGKRINAREIVT 987
+ ++I ++ + P K+ R VT
Sbjct: 245 LVENPSARITIPDIKKDRWYNKPLKKGAKRPRVT 278
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 65/274 (23%), Positives = 111/274 (40%), Gaps = 29/274 (10%)
Query: 734 LGIGSFGSVYVARLQDGME-VAVKVFHQRYERAL---KSFQDECEVMKRIRHRNLVKIIS 789
LG G++G V +A + E VAVK+ + RA+ ++ + E + K + H N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 790 ACSNDDFKALIMEYMPNGSLENRLYSGTCMLDI-FQRL--NIMIDVALALEYLHFGHSTP 846
+ + L +EY G L +R+ M + QR +M V YL H
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YL---HGIG 125
Query: 847 IIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVS 894
I H + ISDF +A ++ + + T+ Y+APE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 895 TRG-DVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERY 953
DV+S GI+L G+ P D+ S W ++ + ID+ L+ +
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 245
Query: 954 FAAKEQSLLSILNLATECTIESPGKRINAREIVT 987
+ ++I ++ + P K+ R VT
Sbjct: 246 LVENPSARITIPDIKKDRWYNKPLKKGAKRPRVT 279
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 36/211 (17%)
Query: 732 NLLGIGSFGSVYVARLQDGMEV----AVKVFHQ----RYERALKSFQDECEVMKRIRHRN 783
+LG G++G V++ R G + A+KV + + + + + E +V++ IR
Sbjct: 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 119
Query: 784 -LVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMI---DVALALEYL 839
LV + A + LI++Y+ G L ++ + F + I ++ LALE+L
Sbjct: 120 FLVTLHYAFQTETKLHLILDYINGGEL----FTHLSQRERFTEHEVQIYVGEIVLALEHL 175
Query: 840 HFGHSTPIIHYMV----------AHI--SDFSIAKFLNGQDQLSMQTQTLATIGYMAPEY 887
H II+ + H+ +DF ++K D+ TI YMAP+
Sbjct: 176 H---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVA-DETERAYDFCGTIEYMAPDI 231
Query: 888 GVQGRVSTRG---DVYSYGIMLMETFTGKKP 915
V+G S D +S G+++ E TG P
Sbjct: 232 -VRGGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 45/205 (21%), Positives = 85/205 (41%), Gaps = 32/205 (15%)
Query: 734 LGIGSFGSVY-VARLQDGMEVAVK---VFHQRYERALKSFQDECEVMKRIRHRNLVKIIS 789
+G G F VY A L DG+ VA+K +F +A E +++K++ H N++K +
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYA 99
Query: 790 ACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEY-------LHFG 842
+ D+ +++E G L M+ F++ +I +Y L
Sbjct: 100 SFIEDNELNIVLELADAGDLSR-------MIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 843 HSTPIIH------------YMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQ 890
HS ++H V + D + +F + + + + T YM+PE +
Sbjct: 153 HSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT--TAAHSLVGTPYYMSPERIHE 210
Query: 891 GRVSTRGDVYSYGIMLMETFTGKKP 915
+ + D++S G +L E + P
Sbjct: 211 NGYNFKSDIWSLGCLLYEMAALQSP 235
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 106/267 (39%), Gaps = 49/267 (18%)
Query: 688 LKWKLIRCWKSITGSSNDGINSPQAIRRFSY-HELLQATDRFSKNNLLGIGSFGSVYVA- 745
++WK++ + I G++ I+ Q Y H+ +R S LG G+FG V A
Sbjct: 9 VQWKVV---EEINGNNYVYIDPTQ----LPYDHKWEFPRNRLSFGKTLGAGAFGKVVEAT 61
Query: 746 -----RLQDGMEVAVKVF----HQRYERALKSFQDECEVMKRI-RHRNLVKIISACSNDD 795
+ M VAVK+ H AL S E +V+ + H N+V ++ AC+
Sbjct: 62 AYGLIKSDAAMTVAVKMLKPSAHLTEREALMS---ELKVLSYLGNHMNIVNLLGACTIGG 118
Query: 796 FKALIMEYMPNGSLENRLY----SGTC-------------MLDIFQRLNIMIDVALALEY 838
+I EY G L N L S C LD+ L+ VA + +
Sbjct: 119 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAF 178
Query: 839 LH---------FGHSTPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGV 889
L + + H + I DF +A+ + ++ + +MAPE
Sbjct: 179 LASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIF 238
Query: 890 QGRVSTRGDVYSYGIMLMETFT-GKKP 915
+ DV+SYGI L E F+ G P
Sbjct: 239 NCVYTFESDVWSYGIFLWELFSLGSSP 265
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 54/205 (26%), Positives = 87/205 (42%), Gaps = 29/205 (14%)
Query: 734 LGIGSFGSVYVARLQDGME-VAVKVFHQRYERAL---KSFQDECEVMKRIRHRNLVKIIS 789
LG G++G V +A + E VAVK+ + RA+ ++ + E + K + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 790 ACSNDDFKALIMEYMPNGSLENRLYSGTCMLDI-FQRL--NIMIDVALALEYLHFGHSTP 846
+ + L +EY G L +R+ M + QR +M V YL H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YL---HGIG 124
Query: 847 IIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVS 894
I H + ISDF +A ++ + + T+ Y+APE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 895 TRG-DVYSYGIMLMETFTGKKPTDE 918
DV+S GI+L G+ P D+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 54/205 (26%), Positives = 87/205 (42%), Gaps = 29/205 (14%)
Query: 734 LGIGSFGSVYVARLQDGME-VAVKVFHQRYERAL---KSFQDECEVMKRIRHRNLVKIIS 789
LG G++G V +A + E VAVK+ + RA+ ++ + E + K + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 790 ACSNDDFKALIMEYMPNGSLENRLYSGTCMLDI-FQRL--NIMIDVALALEYLHFGHSTP 846
+ + L +EY G L +R+ M + QR +M V YL H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YL---HGIG 124
Query: 847 IIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVS 894
I H + ISDF +A ++ + + T+ Y+APE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 895 TRG-DVYSYGIMLMETFTGKKPTDE 918
DV+S GI+L G+ P D+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 54/205 (26%), Positives = 87/205 (42%), Gaps = 29/205 (14%)
Query: 734 LGIGSFGSVYVARLQDGME-VAVKVFHQRYERAL---KSFQDECEVMKRIRHRNLVKIIS 789
LG G++G V +A + E VAVK+ + RA+ ++ + E + K + H N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 790 ACSNDDFKALIMEYMPNGSLENRLYSGTCMLDI-FQRL--NIMIDVALALEYLHFGHSTP 846
+ + L +EY G L +R+ M + QR +M V YL H
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YL---HGIG 125
Query: 847 IIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVS 894
I H + ISDF +A ++ + + T+ Y+APE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 895 TRG-DVYSYGIMLMETFTGKKPTDE 918
DV+S GI+L G+ P D+
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 54/205 (26%), Positives = 87/205 (42%), Gaps = 29/205 (14%)
Query: 734 LGIGSFGSVYVARLQDGME-VAVKVFHQRYERAL---KSFQDECEVMKRIRHRNLVKIIS 789
LG G++G V +A + E VAVK+ + RA+ ++ + E + K + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 790 ACSNDDFKALIMEYMPNGSLENRLYSGTCMLDI-FQRL--NIMIDVALALEYLHFGHSTP 846
+ + L +EY G L +R+ M + QR +M V YL H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YL---HGIG 124
Query: 847 IIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVS 894
I H + ISDF +A ++ + + T+ Y+APE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 895 TRG-DVYSYGIMLMETFTGKKPTDE 918
DV+S GI+L G+ P D+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 54/205 (26%), Positives = 87/205 (42%), Gaps = 29/205 (14%)
Query: 734 LGIGSFGSVYVARLQDGME-VAVKVFHQRYERAL---KSFQDECEVMKRIRHRNLVKIIS 789
LG G++G V +A + E VAVK+ + RA+ ++ + E + K + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 790 ACSNDDFKALIMEYMPNGSLENRLYSGTCMLDI-FQRL--NIMIDVALALEYLHFGHSTP 846
+ + L +EY G L +R+ M + QR +M V YL H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YL---HGIG 124
Query: 847 IIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVS 894
I H + ISDF +A ++ + + T+ Y+APE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 895 TRG-DVYSYGIMLMETFTGKKPTDE 918
DV+S GI+L G+ P D+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 54/205 (26%), Positives = 87/205 (42%), Gaps = 29/205 (14%)
Query: 734 LGIGSFGSVYVARLQDGME-VAVKVFHQRYERAL---KSFQDECEVMKRIRHRNLVKIIS 789
LG G++G V +A + E VAVK+ + RA+ ++ + E + K + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 790 ACSNDDFKALIMEYMPNGSLENRLYSGTCMLDI-FQRL--NIMIDVALALEYLHFGHSTP 846
+ + L +EY G L +R+ M + QR +M V YL H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YL---HGIG 124
Query: 847 IIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVS 894
I H + ISDF +A ++ + + T+ Y+APE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 895 TRG-DVYSYGIMLMETFTGKKPTDE 918
DV+S GI+L G+ P D+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 54/205 (26%), Positives = 87/205 (42%), Gaps = 29/205 (14%)
Query: 734 LGIGSFGSVYVARLQDGME-VAVKVFHQRYERAL---KSFQDECEVMKRIRHRNLVKIIS 789
LG G++G V +A + E VAVK+ + RA+ ++ + E + K + H N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 790 ACSNDDFKALIMEYMPNGSLENRLYSGTCMLDI-FQRL--NIMIDVALALEYLHFGHSTP 846
+ + L +EY G L +R+ M + QR +M V YL H
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YL---HGIG 125
Query: 847 IIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVS 894
I H + ISDF +A ++ + + T+ Y+APE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 895 TRG-DVYSYGIMLMETFTGKKPTDE 918
DV+S GI+L G+ P D+
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 93/241 (38%), Gaps = 29/241 (12%)
Query: 704 NDGINSPQAIRRFSYHELLQATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRY 762
N+G+ + ++ Y E + + LG GSFG V+ + Q G + AVK
Sbjct: 51 NEGVLLTEKLKPVDY-EYREEVHWMTHQPRLGRGSFGEVHRMKDKQTGFQCAVKKVR--- 106
Query: 763 ERALKSFQ-DECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLD 821
L+ F+ +E + +V + A + + ME + GSL + C+ +
Sbjct: 107 ---LEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPE 163
Query: 822 IFQRLNIMIDVALALEYLHFGHSTPIIHYMVAH-----ISDFSIAKFLNGQDQLSMQTQT 876
+ + ALE L + H+ I+H V SD S A + L +Q
Sbjct: 164 D----RALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG 219
Query: 877 LA-----------TIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELS 925
L T +MAPE + + D++S M++ G P + F G L
Sbjct: 220 LGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLC 279
Query: 926 L 926
L
Sbjct: 280 L 280
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 88/201 (43%), Gaps = 32/201 (15%)
Query: 734 LGIGSFGSVY-VARLQDGMEVAVKV--FHQRYERALKSFQDECEVMKRIRHRNLVK---- 786
+G GS+G + R DG + K + E + E +++ ++H N+V+
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 787 IISACSNDDFKALIMEYMPNGSLENRLYSGT---CMLDIFQRLNIMIDVALALEYLHF-- 841
II + + ++MEY G L + + GT LD L +M + LAL+ H
Sbjct: 74 IIDRTNTTLY--IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 842 --GHSTPIIHYMV------------AHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEY 887
GH+ ++H + + DF +A+ LN + + + + T YM+PE
Sbjct: 132 DGGHT--VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFA--KEFVGTPYYMSPEQ 187
Query: 888 GVQGRVSTRGDVYSYGIMLME 908
+ + + D++S G +L E
Sbjct: 188 MNRMSYNEKSDIWSLGCLLYE 208
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 91/228 (39%), Gaps = 47/228 (20%)
Query: 722 LQATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRYERALKSFQDECEVMKRIR 780
L+ F + +LG G+FG V AR D A+K E+ L + E ++ +
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEK-LSTILSEVMLLASLN 60
Query: 781 H-------------RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTC--MLDIFQR 825
H RN VK ++A + MEY NG+L + ++S D + R
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWR 120
Query: 826 LNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQ-DQLSM 872
L I LE L + HS IIH + I DF +AK ++ D L +
Sbjct: 121 LFRQI-----LEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKL 175
Query: 873 QTQTL-----------ATIGYMAPEY-GVQGRVSTRGDVYSYGIMLME 908
+Q L T Y+A E G + + D+YS GI+ E
Sbjct: 176 DSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFE 223
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 106/267 (39%), Gaps = 49/267 (18%)
Query: 688 LKWKLIRCWKSITGSSNDGINSPQAIRRFSY-HELLQATDRFSKNNLLGIGSFGSVYVA- 745
++WK++ + I G++ I+ Q Y H+ +R S LG G+FG V A
Sbjct: 14 VQWKVV---EEINGNNYVYIDPTQ----LPYDHKWEFPRNRLSFGKTLGAGAFGKVVEAT 66
Query: 746 -----RLQDGMEVAVKVF----HQRYERALKSFQDECEVMKRI-RHRNLVKIISACSNDD 795
+ M VAVK+ H AL S E +V+ + H N+V ++ AC+
Sbjct: 67 AYGLIKSDAAMTVAVKMLKPSAHLTEREALMS---ELKVLSYLGNHMNIVNLLGACTIGG 123
Query: 796 FKALIMEYMPNGSLENRLY----SGTC-------------MLDIFQRLNIMIDVALALEY 838
+I EY G L N L S C LD+ L+ VA + +
Sbjct: 124 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAF 183
Query: 839 LH---------FGHSTPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGV 889
L + + H + I DF +A+ + ++ + +MAPE
Sbjct: 184 LASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIF 243
Query: 890 QGRVSTRGDVYSYGIMLMETFT-GKKP 915
+ DV+SYGI L E F+ G P
Sbjct: 244 NCVYTFESDVWSYGIFLWELFSLGSSP 270
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 44/210 (20%), Positives = 86/210 (40%), Gaps = 27/210 (12%)
Query: 725 TDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALK---SFQDECEVMKRIR 780
+DR+ + LG G++G V + + + G E A+K+ + + DE V+K++
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 79
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH 840
H N++K+ + L+ME G L+ + F ++ + + L
Sbjct: 80 HPNIMKLYEFFEDKRNYYLVMEVYRGG----ELFDEIILRQKFSEVDAAVIMKQVLSGTT 135
Query: 841 FGHSTPIIHY---------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAP 885
+ H I+H + I DF ++ ++ + L T Y+AP
Sbjct: 136 YLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMK---ERLGTAYYIAP 192
Query: 886 EYGVQGRVSTRGDVYSYGIMLMETFTGKKP 915
E ++ + + DV+S G++L G P
Sbjct: 193 EV-LRKKYDEKCDVWSCGVILYILLCGYPP 221
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 87/204 (42%), Gaps = 21/204 (10%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQ---DECEVMKRIRH 781
D+F + LG GSFG V + + ++ G A+K+ ++ LK + +E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH- 840
LVK+ + ++ ++MEY+ G + + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS 159
Query: 841 ----FGHSTP----IIHYMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQG 891
+ P I ++DF AK + G +T L T Y+AP +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPAIILSK 213
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
+ D ++ G+++ E G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3ZYI|A Chain A, Netring2 In Complex With Ngl2
Length = 452
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 110/281 (39%), Gaps = 57/281 (20%)
Query: 287 NVEFLNLGTNRFSGNIPSSITNASKLTVFQLRGNSFSGFIPNTIGNLRNLEFLNIADNYL 346
N +LNL N + + L V QL NS L +L L + DN+L
Sbjct: 76 NTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWL 135
Query: 347 TS-STPELSFLSSLTNCQKIRVLILAGNPLDGILPSSIGNLSISLERFQMFNCRISGKIP 405
T + +LS K+R L L NP++ I PS N SL R + G++
Sbjct: 136 TVIPSGAFEYLS------KLRELWLRNNPIESI-PSYAFNRVPSLMRLDL------GELK 182
Query: 406 QVISXXXXXXXXXXXXXXXXXSIPVTFSRLLNLQGLGLAFNKLARSIPDEICHLAKLDKL 465
++ F L NL+ L L + + +P+ + L L++L
Sbjct: 183 KLEYISEG-----------------AFEGLFNLKYLNLGMCNI-KDMPN-LTPLVGLEEL 223
Query: 466 ILHGNKFSGAIPSCSGNLTSLRALYLGSNRFTSALPSTIWNLKDILFFDVSSNSLDGPLS 525
+ GN F P L+SL+ L++ +++ + + N+ DG
Sbjct: 224 EMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSL----------------IERNAFDG--- 264
Query: 526 LDIGNLKVVIELNLSRNNLSGDIPITIGGLKNLQKLFLANN 566
L ++ELNL+ NNLS L+ L +L L +N
Sbjct: 265 -----LASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHN 300
Score = 32.7 bits (73), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 23/174 (13%)
Query: 431 TFSRLLNLQGLGLAFNKLARSIPDEICHLAKLDKLILHGNKFSGAIPSCSGN-LTSLRAL 489
TF L +L+ L L N + + LA L+ L L N + IPS + L+ LR L
Sbjct: 94 TFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLT-VIPSGAFEYLSKLREL 152
Query: 490 YLGSNRFTSALPSTIWN-LKDILFFD---------VSSNSLDGPLSLDIGNLKVVIELNL 539
+L +N S +PS +N + ++ D +S + +G + NLK LNL
Sbjct: 153 WLRNNPIES-IPSYAFNRVPSLMRLDLGELKKLEYISEGAFEG-----LFNLKY---LNL 203
Query: 540 SRNNLSGDIPITIGGLKNLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNKIS 593
N+ D+P + L L++L ++ N P SF GLSSL+ L + +++S
Sbjct: 204 GMCNIK-DMP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVS 255
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 84/203 (41%), Gaps = 21/203 (10%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQDGMEVAVKVFH--QRYERALKSFQDECEVMKRIRHRN 783
+++ K +G G++G VY A+ G VA+K E + E ++K + H N
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGH 843
+V +I ++ L+ E+M L+ L L Q I I + L + H
Sbjct: 81 IVSLIDVIHSERCLTLVFEFM-EKDLKKVLDENKTGL---QDSQIKIYLYQLLRGVAHCH 136
Query: 844 STPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGV-Q 890
I+H + ++DF +A+ + T + T+ Y AP+ +
Sbjct: 137 QHRILHRDLKPQNLLINSDGALKLADFGLARAFGI--PVRSYTHEVVTLWYRAPDVLMGS 194
Query: 891 GRVSTRGDVYSYGIMLMETFTGK 913
+ ST D++S G + E TGK
Sbjct: 195 KKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 84/203 (41%), Gaps = 21/203 (10%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQDGMEVAVKVFH--QRYERALKSFQDECEVMKRIRHRN 783
+++ K +G G++G VY A+ G VA+K E + E ++K + H N
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGH 843
+V +I ++ L+ E+M L+ L L Q I I + L + H
Sbjct: 81 IVSLIDVIHSERCLTLVFEFM-EKDLKKVLDENKTGL---QDSQIKIYLYQLLRGVAHCH 136
Query: 844 STPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGV-Q 890
I+H + ++DF +A+ + T + T+ Y AP+ +
Sbjct: 137 QHRILHRDLKPQNLLINSDGALKLADFGLARAFGI--PVRSYTHEVVTLWYRAPDVLMGS 194
Query: 891 GRVSTRGDVYSYGIMLMETFTGK 913
+ ST D++S G + E TGK
Sbjct: 195 KKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 70/152 (46%), Gaps = 13/152 (8%)
Query: 231 QEMGNLPYLVRLTLATNNLVGVVPFTIFN-MSTLKKLSLLENTLWGSLPSRIDLSLPNVE 289
+E+ NL YL+ T N + +P +F+ ++ LK+L L+EN L SLP + L N+
Sbjct: 82 KELTNLTYLI----LTGNQLQSLPNGVFDKLTNLKELVLVENQL-QSLPDGVFDKLTNLT 136
Query: 290 FLNLGTNRFSGNIPSSITNA-SKLTVFQLRGNSFSGFIPNTIGNLRNLEFLNIADNYLTS 348
+LNL N+ +P + + + LT L N L L+ L + N L
Sbjct: 137 YLNLAHNQLQS-LPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQL-K 194
Query: 349 STPELSFLSSLTNCQKIRVLILAGNPLDGILP 380
S P+ F LT+ Q I L NP D P
Sbjct: 195 SVPDGVF-DRLTSLQYI---WLHDNPWDCTCP 222
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 14/202 (6%)
Query: 305 SITNASKLTVFQLRGNSFSGFIPNT--IGNLRNLEFL-NIADNYLTSSTPELSFLSSLTN 361
S+T+A V Q NS I N I +++ +++L N+ YL +L +S+L
Sbjct: 30 SVTDA----VTQNELNSIDQIIANNSDIKSVQGIQYLPNV--RYLALGGNKLHDISALKE 83
Query: 362 CQKIRVLILAGNPLDGILPSSIGNLSISLERFQMFNCRISGKIPQVISXXXXXXXXXXXX 421
+ LIL GN L LP+ + + +L+ + ++ +P +
Sbjct: 84 LTNLTYLILTGNQLQS-LPNGVFDKLTNLKELVLVENQLQS-LPDGVFDKLTNLTYLNLA 141
Query: 422 XXXXXSIPV-TFSRLLNLQGLGLAFNKLARSIPDEIC-HLAKLDKLILHGNKFSGAIPSC 479
S+P F +L NL L L++N+L +S+P+ + L +L L L+ N+
Sbjct: 142 HNQLQSLPKGVFDKLTNLTELDLSYNQL-QSLPEGVFDKLTQLKDLRLYQNQLKSVPDGV 200
Query: 480 SGNLTSLRALYLGSNRFTSALP 501
LTSL+ ++L N + P
Sbjct: 201 FDRLTSLQYIWLHDNPWDCTCP 222
Score = 37.0 bits (84), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 70/164 (42%), Gaps = 4/164 (2%)
Query: 435 LLNLQGLGLAFNKLARSIPDEICHLAKLDKLILHGNKFSGAIPSCSGNLTSLRALYLGSN 494
L N++ L L NKL + L L LIL GN+ LT+L+ L L N
Sbjct: 62 LPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVEN 119
Query: 495 RFTSALPSTIWN-LKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRNNLSGDIPITIG 553
+ S LP +++ L ++ + +++ N L L + EL+LS N L
Sbjct: 120 QLQS-LPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFD 178
Query: 554 GLKNLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNKISGVIP 597
L L+ L L N+L+ F L+SL+ + L N P
Sbjct: 179 KLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222
Score = 33.9 bits (76), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 69/145 (47%), Gaps = 12/145 (8%)
Query: 456 ICHLAKLDKLILHGNKFSGAIPSCSGNLTSLRALYLGSNRFTSALPSTIW----NLKDIL 511
I +L + L L GNK S LT+L L L N+ S LP+ ++ NLK+++
Sbjct: 59 IQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQS-LPNGVFDKLTNLKELV 115
Query: 512 FFDVSSNSLDGPLSLDIGNLKVVIELNLSRNNLSGDIPITIGGLKNLQKLFLANNRLEGP 571
+ SL + + NL LNL+ N L L NL +L L+ N+L+
Sbjct: 116 LVENQLQSLPDGVFDKLTNLTY---LNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQS- 171
Query: 572 IPES-FSGLSSLEILDLSKNKISGV 595
+PE F L+ L+ L L +N++ V
Sbjct: 172 LPEGVFDKLTQLKDLRLYQNQLKSV 196
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 95/243 (39%), Gaps = 33/243 (13%)
Query: 704 NDGINSPQAIRRFSYHELLQATDRFSKNNLLGIGSFGSVYVARLQD---GMEVAVKVFHQ 760
N+G+ + ++ Y E + + +G GSFG V+ R++D G + AVK
Sbjct: 37 NEGVLLTEKLKPVDY-EYREEVHWMTHQPRVGRGSFGEVH--RMKDKQTGFQCAVKKVR- 92
Query: 761 RYERALKSFQ-DECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCM 819
L+ F+ +E + +V + A + + ME + GSL + C+
Sbjct: 93 -----LEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCL 147
Query: 820 LDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVAH-----ISDFSIAKFLNGQDQLSMQT 874
+ + + ALE L + H+ I+H V SD S A + L +Q
Sbjct: 148 PED----RALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQP 203
Query: 875 QTLA-----------TIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGE 923
L T +MAPE + + D++S M++ G P + F G
Sbjct: 204 DGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP 263
Query: 924 LSL 926
L L
Sbjct: 264 LCL 266
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 87/204 (42%), Gaps = 21/204 (10%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQ---DECEVMKRIRH 781
D+F + LG GSFG V + + ++ G A+K+ ++ LK + +E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH- 840
LVK+ + ++ ++MEY+ G + + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS 159
Query: 841 ----FGHSTP----IIHYMVAHISDFSIAKFLNGQDQLSMQTQTL-ATIGYMAPEYGVQG 891
+ P I ++DF AK + G +T L T +APE +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEALAPEIILSK 213
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
+ D ++ G+++ E G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 49/201 (24%), Positives = 86/201 (42%), Gaps = 32/201 (15%)
Query: 734 LGIGSFGSVY-VARLQDGMEVAVKV--FHQRYERALKSFQDECEVMKRIRHRNLVK---- 786
+G GS+G + R DG + K + E + E +++ ++H N+V+
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 787 IISACSNDDFKALIMEYMPNGSLENRLYSGT---CMLDIFQRLNIMIDVALALEYLHF-- 841
II + + ++MEY G L + + GT LD L +M + LAL+ H
Sbjct: 74 IIDRTNTTLY--IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 842 --GHSTPIIHYMV------------AHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEY 887
GH+ ++H + + DF +A+ LN S + T YM+PE
Sbjct: 132 DGGHT--VLHRDLKPANVFLDGKQNVKLGDFGLARILN--HDTSFAKAFVGTPYYMSPEQ 187
Query: 888 GVQGRVSTRGDVYSYGIMLME 908
+ + + D++S G +L E
Sbjct: 188 MNRMSYNEKSDIWSLGCLLYE 208
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 95/243 (39%), Gaps = 33/243 (13%)
Query: 704 NDGINSPQAIRRFSYHELLQATDRFSKNNLLGIGSFGSVYVARLQD---GMEVAVKVFHQ 760
N+G+ + ++ Y E + + +G GSFG V+ R++D G + AVK
Sbjct: 53 NEGVLLTEKLKPVDY-EYREEVHWMTHQPRVGRGSFGEVH--RMKDKQTGFQCAVKKVR- 108
Query: 761 RYERALKSFQ-DECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCM 819
L+ F+ +E + +V + A + + ME + GSL + C+
Sbjct: 109 -----LEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCL 163
Query: 820 LDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVAH-----ISDFSIAKFLNGQDQLSMQT 874
+ + + ALE L + H+ I+H V SD S A + L +Q
Sbjct: 164 PED----RALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQP 219
Query: 875 QTLA-----------TIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGE 923
L T +MAPE + + D++S M++ G P + F G
Sbjct: 220 DGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP 279
Query: 924 LSL 926
L L
Sbjct: 280 LCL 282
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 40.8 bits (94), Expect = 0.004, Method: Composition-based stats.
Identities = 49/201 (24%), Positives = 86/201 (42%), Gaps = 32/201 (15%)
Query: 734 LGIGSFGSVY-VARLQDGMEVAVKV--FHQRYERALKSFQDECEVMKRIRHRNLVK---- 786
+G GS+G + R DG + K + E + E +++ ++H N+V+
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 787 IISACSNDDFKALIMEYMPNGSLENRLYSGT---CMLDIFQRLNIMIDVALALEYLHF-- 841
II + + ++MEY G L + + GT LD L +M + LAL+ H
Sbjct: 74 IIDRTNTTLY--IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 842 --GHSTPIIHYMV------------AHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEY 887
GH+ ++H + + DF +A+ LN S + T YM+PE
Sbjct: 132 DGGHT--VLHRDLKPANVFLDGKQNVKLGDFGLARILN--HDTSFAKTFVGTPYYMSPEQ 187
Query: 888 GVQGRVSTRGDVYSYGIMLME 908
+ + + D++S G +L E
Sbjct: 188 MNRMSYNEKSDIWSLGCLLYE 208
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 552 IGGLKNLQKLFLANNRLEG-PIPESFSGLSSLEILDLSKNKISGVIPT 598
IG LK L++L +A+N ++ +PE FS L++LE LDLS NKI + T
Sbjct: 120 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 167
Score = 33.5 bits (75), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 283 LSLPNVEFLNLGTNRFSGNIPSSITNASKLTVFQLRGNSF-SGFIPNTIGNLRNLEFLNI 341
LSL N+ +L++ S L V ++ GNSF F+P+ LRNL FL++
Sbjct: 418 LSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDL 477
Query: 342 ADNYLTSSTP 351
+ L +P
Sbjct: 478 SQCQLEQLSP 487
Score = 33.1 bits (74), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 502 STIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRNNLSGD-IPITIGGLKNLQK 560
S +L+++++ D+S + L + L ++ N+ + +P L+NL
Sbjct: 415 SVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTF 474
Query: 561 LFLANNRLEGPIPESFSGLSSLEILDLSKN 590
L L+ +LE P +F+ LSSL++L++S N
Sbjct: 475 LDLSQCQLEQLSPTAFNSLSSLQVLNMSHN 504
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 3/132 (2%)
Query: 469 GNKFSGAIPSCSGNLTSLRALYLGSNRFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDI 528
G F G TSL+ L L N + + S L+ + D ++L +
Sbjct: 358 GLSFKGCCSQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSV 416
Query: 529 G-NLKVVIELNLSRNNLSGDIPITIGGLKNLQKLFLANNRL-EGPIPESFSGLSSLEILD 586
+L+ +I L++S + GL +L+ L +A N E +P+ F+ L +L LD
Sbjct: 417 FLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLD 476
Query: 587 LSKNKISGVIPT 598
LS+ ++ + PT
Sbjct: 477 LSQCQLEQLSPT 488
Score = 30.0 bits (66), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 2/113 (1%)
Query: 483 LTSLRALYLGSNRFT-SALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSR 541
L+SL L + N F + LP L+++ F D+S L+ +L + LN+S
Sbjct: 444 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSH 503
Query: 542 NNLSGDIPITIGGLKNLQKLFLANNRLEGPIPESFSGL-SSLEILDLSKNKIS 593
NN L +LQ L + N + + SSL L+L++N +
Sbjct: 504 NNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 556
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 86/211 (40%), Gaps = 29/211 (13%)
Query: 725 TDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALK---SFQDECEVMKRIR 780
+DR+ + LG G++G V + + + G E A+K+ + + DE V+K++
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH 840
H N++K+ + L+ME G L+ + F ++ + + L
Sbjct: 63 HPNIMKLYEFFEDKRNYYLVMEVYRGGE----LFDEIILRQKFSEVDAAVIMKQVLSGTT 118
Query: 841 FGHSTPIIHY---------------MVAHISDFSI-AKFLNGQDQLSMQTQTLATIGYMA 884
+ H I+H + I DF + A F G + L T Y+A
Sbjct: 119 YLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG----GKMKERLGTAYYIA 174
Query: 885 PEYGVQGRVSTRGDVYSYGIMLMETFTGKKP 915
PE ++ + + DV+S G++L G P
Sbjct: 175 PEV-LRKKYDEKCDVWSCGVILYILLCGYPP 204
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 3/119 (2%)
Query: 465 LILHGNKFSGAIPSCSGNLTSLRALYLGSNRFTSALPSTIWN-LKDILFFDVSSNSLDGP 523
L LH N+ + P +L +L+ LYLGSN+ ALP +++ L + D+ +N L
Sbjct: 45 LYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVFDSLTQLTVLDLGTNQLTVL 103
Query: 524 LSLDIGNLKVVIELNLSRNNLSGDIPITIGGLKNLQKLFLANNRLEGPIPESFSGLSSL 582
S L + EL + N L+ ++P I L +L L L N+L+ +F LSSL
Sbjct: 104 PSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSL 161
Score = 38.1 bits (87), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 174 RNMFHGKIPSTLSKCKQLEGLYLRFNNLSGAIPKEIGNLTKLKDIILNDNELRGEIPQEM 233
R+ H +P+ + Q+ LYL N ++ P +L LK++ L N+L G +P +
Sbjct: 27 RSKRHASVPAGIPTNAQI--LYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGV 83
Query: 234 -GNLPYLVRLTLATNNLVGVVPFTIFN-MSTLKKLSLLENTLWGSLPSRIDLSLPNVEFL 291
+L L L L TN L V+P +F+ + LK+L + N L LP I+ L ++ L
Sbjct: 84 FDSLTQLTVLDLGTNQLT-VLPSAVFDRLVHLKELFMCCNKL-TELPRGIE-RLTHLTHL 140
Query: 292 NLGTNRFSGNIPSSITNASKLTVFQLRGNSF 322
L N+ + S LT L GN +
Sbjct: 141 ALDQNQLKSIPHGAFDRLSSLTHAYLFGNPW 171
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 537 LNLSRNNLSGDIPITIGGLKNLQKLFLANNRLEGPIPES-FSGLSSLEILDLSKNKISGV 595
L L N ++ P L NL++L+L +N+L G +P F L+ L +LDL N+++ V
Sbjct: 45 LYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVFDSLTQLTVLDLGTNQLT-V 102
Query: 596 IPTXXXXXXXXXXXXXXXXXXXGEIPRG 623
+P+ E+PRG
Sbjct: 103 LPSAVFDRLVHLKELFMCCNKLTELPRG 130
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 552 IGGLKNLQKLFLANNRLEG-PIPESFSGLSSLEILDLSKNKISGVIPT 598
IG LK L++L +A+N ++ +PE FS L++LE LDLS NKI + T
Sbjct: 144 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 191
Score = 33.5 bits (75), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 283 LSLPNVEFLNLGTNRFSGNIPSSITNASKLTVFQLRGNSF-SGFIPNTIGNLRNLEFLNI 341
LSL N+ +L++ S L V ++ GNSF F+P+ LRNL FL++
Sbjct: 442 LSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDL 501
Query: 342 ADNYLTSSTP 351
+ L +P
Sbjct: 502 SQCQLEQLSP 511
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 502 STIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRNNLSGD-IPITIGGLKNLQK 560
S +L+++++ D+S + L + L ++ N+ + +P L+NL
Sbjct: 439 SVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTF 498
Query: 561 LFLANNRLEGPIPESFSGLSSLEILDLSKN 590
L L+ +LE P +F+ LSSL++L++S N
Sbjct: 499 LDLSQCQLEQLSPTAFNSLSSLQVLNMSHN 528
Score = 30.0 bits (66), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 531 LKVVIELNLSRNNLSGDIPITIGGLKNLQKLFLANNRL-EGPIPESFSGLSSLEILDLSK 589
L+ +I L++S + GL +L+ L +A N E +P+ F+ L +L LDLS+
Sbjct: 444 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQ 503
Query: 590 NKISGVIPT 598
++ + PT
Sbjct: 504 CQLEQLSPT 512
Score = 29.6 bits (65), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 2/113 (1%)
Query: 483 LTSLRALYLGSNRFTSA-LPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSR 541
L+SL L + N F LP L+++ F D+S L+ +L + LN+S
Sbjct: 468 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSH 527
Query: 542 NNLSGDIPITIGGLKNLQKLFLANNRLEGPIPESFSGL-SSLEILDLSKNKIS 593
NN L +LQ L + N + + SSL L+L++N +
Sbjct: 528 NNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 580
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 88/209 (42%), Gaps = 31/209 (14%)
Query: 728 FSKNNLLGIGSFGSVYVARLQDGMEV-AVKVFHQRYERALKSFQDECE-VMKRI-----R 780
F + +LG GSFG V++A + + A+K + + L EC V KR+
Sbjct: 20 FELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKK--DVVLMDDDVECTMVEKRVLSLAWE 77
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH 840
H L + + +MEY+ G L + S D+ + ++ L L++LH
Sbjct: 78 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQS-CHKFDLSRATFYAAEIILGLQFLH 136
Query: 841 FGHSTPIIHYMVA------------HISDFSIAKFLNGQDQL--SMQTQTLATIGYMAPE 886
S I++ + I+DF + K ++ L + + T Y+APE
Sbjct: 137 ---SKGIVYRDLKLDNILLDKDGHIKIADFGMCK----ENMLGDAKTNEFCGTPDYIAPE 189
Query: 887 YGVQGRVSTRGDVYSYGIMLMETFTGKKP 915
+ + + D +S+G++L E G+ P
Sbjct: 190 ILLGQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 88/201 (43%), Gaps = 25/201 (12%)
Query: 727 RFSKNNLLGIGSFGSVYVARLQDGMEVA----VKVFHQRYERAL--KSFQDECEVMKRIR 780
R+ K + LG G F +VY AR ++ ++ +K+ H+ + ++ E ++++ +
Sbjct: 11 RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS 70
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH 840
H N++ ++ A + +L+ ++M LE + + +L M+ LEYL
Sbjct: 71 HPNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYL- 128
Query: 841 FGHSTPIIHY------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYG 888
H I+H V ++DF +AK ++ + T Y APE
Sbjct: 129 --HQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNR--AYXHQVVTRWYRAPELL 184
Query: 889 VQGRVSTRG-DVYSYGIMLME 908
R+ G D+++ G +L E
Sbjct: 185 FGARMYGVGVDMWAVGCILAE 205
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 852 VAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT 911
V I DF +A+ + + T + +MAPE ST+ DV+SYG++L E F+
Sbjct: 237 VVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
Query: 912 -GKKPTDEIFIGELSLSR 928
G P + + E SR
Sbjct: 297 LGGSPYPGVQMDEDFCSR 314
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 40.4 bits (93), Expect = 0.005, Method: Composition-based stats.
Identities = 59/234 (25%), Positives = 94/234 (40%), Gaps = 40/234 (17%)
Query: 726 DRFSKNNLLGIGSFGSVYVA------RLQDGMEVAVKVFHQ----RYERALKSFQDECEV 775
DR LG G+FG V A + VAVK+ + RAL S E ++
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMS---ELKI 85
Query: 776 MKRI-RHRNLVKIISACSNDDFKAL-IMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVA 833
+ I H N+V ++ AC+ + I+E+ G+L L S ++ ++ D
Sbjct: 86 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDF- 144
Query: 834 LALEYL-----------HFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQL 870
L LE+L F S IH +A I DF +A+ +
Sbjct: 145 LTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX 204
Query: 871 SMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGE 923
+ + +MAPE + + DV+S+G++L E F+ G P + I E
Sbjct: 205 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 258
>pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|B Chain B, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|C Chain C, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|D Chain D, Crystal Structure Of The Lingo-1 Ectodomain
Length = 477
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 65/158 (41%), Gaps = 25/158 (15%)
Query: 441 LGLAFNKLARSIPDEICHLAKLDKLILHGNKFSGAIPSCSGNLTSLRALYLGSNRFTSAL 500
L L N++ DE L++L L+ N S P NL +LR L L SNR
Sbjct: 37 LDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIP 96
Query: 501 PSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRNNLSGDIPITIGGLKNLQK 560
L ++ D+S N K+VI L+ L NL+
Sbjct: 97 LGVFTGLSNLTKLDISEN-------------KIVILLD-----------YMFQDLYNLKS 132
Query: 561 LFLANNRLEGPIPESFSGLSSLEILDLSKNKISGVIPT 598
L + +N L +FSGL+SLE L L K ++ IPT
Sbjct: 133 LEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTS-IPT 169
Score = 30.0 bits (66), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 124/317 (39%), Gaps = 44/317 (13%)
Query: 284 SLPNVEFLNLGTNRFSGNIPSSITNASKLTVFQLRGNSFSGFIPNTIGNLRNLEFLNIAD 343
S P++E L L N S P + N L LR N L NL L+I++
Sbjct: 54 SFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISE 113
Query: 344 NYLTSSTPELSFLSSLTNCQKIRVLILAGNPLDGILPSSIGNLSISLERFQMFNCRISGK 403
N + + L N + + V N L I + L+ SLE+ + C ++
Sbjct: 114 NKIVILLDYM--FQDLYNLKSLEV---GDNDLVYISHRAFSGLN-SLEQLTLEKCNLTSI 167
Query: 404 IPQVISXXXXXXXXXXXXXXXXXSIPVTFSRLLNLQGL-GLAFNKLARSIPDEICHLAKL 462
+ +S + V R LN+ + +F +L R EI H L
Sbjct: 168 PTEALS--------------HLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYL 213
Query: 463 DKLILHGNKFSGAIPSC--SGNLTSLRALYLGSNRFTSALPS-TIWNLKDILFFDVSSN- 518
D + P+C NLTSL + +A+P + +L + F ++S N
Sbjct: 214 DTM----------TPNCLYGLNLTSLSITHCN----LTAVPYLAVRHLVYLRFLNLSYNP 259
Query: 519 --SLDGPLSLDIGNLKVVIELNLSRNNLSGDIPITIGGLKNLQKLFLANNRLEGPIPESF 576
+++G + ++ L+ E+ L L+ P GL L+ L ++ N+L F
Sbjct: 260 ISTIEGSMLHELLRLQ---EIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVF 316
Query: 577 SGLSSLEILDLSKNKIS 593
+ +LE L L N ++
Sbjct: 317 HSVGNLETLILDSNPLA 333
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 552 IGGLKNLQKLFLANNRLEG-PIPESFSGLSSLEILDLSKNKISGVIPT 598
IG LK L++L +A+N ++ +PE FS L++LE LDLS NKI + T
Sbjct: 120 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 167
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 93/227 (40%), Gaps = 14/227 (6%)
Query: 255 FTIFNMSTLKKLSLLENTLWGSLPSRIDLSLPNVEFLNLGTN--RFSGNIPSSITNASKL 312
F + +LK+L+ N G+ S +DL P++EFL+L N F G S + L
Sbjct: 319 FPTLKLKSLKRLTFTSNK-GGNAFSEVDL--PSLEFLDLSRNGLSFKGCCSQSDFGTTSL 375
Query: 313 TVFQLRGNSFSGFIPNTIGNLRNLEFLNIADNYLTSSTPELSFLSSLTNCQKIRVLILAG 372
L N N +G L LE L+ + L + E S SL N + +
Sbjct: 376 KYLDLSFNGVITMSSNFLG-LEQLEHLDFQHSNLKQMS-EFSVFLSLRNLIYLDI----S 429
Query: 373 NPLDGILPSSIGNLSISLERFQMF-NCRISGKIPQVISXXXXXXXXXXXXXXXXXSIPVT 431
+ + + I N SLE +M N +P + + P
Sbjct: 430 HTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTA 489
Query: 432 FSRLLNLQGLGLAFNKLARSIPDEIC-HLAKLDKLILHGNKFSGAIP 477
F+ L +LQ L +A N+L +S+PD I L L K+ LH N + + P
Sbjct: 490 FNSLSSLQVLNMASNQL-KSVPDGIFDRLTSLQKIWLHTNPWDCSCP 535
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 502 STIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRNNLSGD-IPITIGGLKNLQK 560
S +L+++++ D+S + L + L ++ N+ + +P L+NL
Sbjct: 415 SVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTF 474
Query: 561 LFLANNRLEGPIPESFSGLSSLEILDLSKNKISGV 595
L L+ +LE P +F+ LSSL++L+++ N++ V
Sbjct: 475 LDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSV 509
Score = 30.8 bits (68), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 3/133 (2%)
Query: 468 HGNKFSGAIPSCSGNLTSLRALYLGSNRFTSALPSTIWNLKDILFFDVSSNSLDGPLSLD 527
+G F G TSL+ L L N + + S L+ + D ++L
Sbjct: 357 NGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFS 415
Query: 528 IG-NLKVVIELNLSRNNLSGDIPITIGGLKNLQKLFLANNRL-EGPIPESFSGLSSLEIL 585
+ +L+ +I L++S + GL +L+ L +A N E +P+ F+ L +L L
Sbjct: 416 VFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFL 475
Query: 586 DLSKNKISGVIPT 598
DLS+ ++ + PT
Sbjct: 476 DLSQCQLEQLSPT 488
Score = 30.8 bits (68), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 1/92 (1%)
Query: 483 LTSLRALYLGSNRFTSA-LPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSR 541
L+SL L + N F LP L+++ F D+S L+ +L + LN++
Sbjct: 444 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMAS 503
Query: 542 NNLSGDIPITIGGLKNLQKLFLANNRLEGPIP 573
N L L +LQK++L N + P
Sbjct: 504 NQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 535
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 40.0 bits (92), Expect = 0.006, Method: Composition-based stats.
Identities = 65/274 (23%), Positives = 110/274 (40%), Gaps = 29/274 (10%)
Query: 734 LGIGSFGSVYVARLQDGME-VAVKVFHQRYERAL---KSFQDECEVMKRIRHRNLVKIIS 789
LG G+ G V +A + E VAVK+ + RA+ ++ + E + K + H N+VK
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMK--RAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 790 ACSNDDFKALIMEYMPNGSLENRLYSGTCMLDI-FQRL--NIMIDVALALEYLHFGHSTP 846
+ + L +EY G L +R+ M + QR +M V YLH
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH---GIG 124
Query: 847 IIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVS 894
I H + ISDF +A ++ + + T+ Y+APE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 895 TRG-DVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERY 953
DV+S GI+L G+ P D+ S W ++ + ID+ L+ +
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 244
Query: 954 FAAKEQSLLSILNLATECTIESPGKRINAREIVT 987
+ ++I ++ + P K+ R VT
Sbjct: 245 LVENPSARITIPDIKKDRWYNKPLKKGAKRPRVT 278
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 40.0 bits (92), Expect = 0.007, Method: Composition-based stats.
Identities = 54/212 (25%), Positives = 91/212 (42%), Gaps = 24/212 (11%)
Query: 724 ATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVK-VFHQRYERALK-SFQDECEVMKRI- 779
AT R+ +G+G++G+VY AR G VA+K V E L S E +++R+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 780 --RHRNLVKIISAC--SNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALA 835
H N+V+++ C S D + + + + R Y I +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 836 LEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLSMQTQTLATIGYM 883
L L F H+ I+H + ++DF +A+ + Q L+ + T+ Y
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALA---PVVVTLWYR 178
Query: 884 APEYGVQGRVSTRGDVYSYGIMLMETFTGKKP 915
APE +Q +T D++S G + E F +KP
Sbjct: 179 APEVLLQSTYATPVDMWSVGCIFAEMFR-RKP 209
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 40.0 bits (92), Expect = 0.007, Method: Composition-based stats.
Identities = 41/140 (29%), Positives = 60/140 (42%), Gaps = 7/140 (5%)
Query: 460 AKLDKLILHGNKFSGAIPSCSGNLTSLRALYLGSNRFTSALPSTIWNLKDILFFDVSSN- 518
A ++ LHGN+ S + +L L+L SN + L + D+S N
Sbjct: 31 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNA 90
Query: 519 ---SLDGPLSLDIGNLKVVIELNLSRNNLSGDIPITIGGLKNLQKLFLANNRLEGPIPES 575
S+D +G L L+L R L P GL LQ L+L +N L+ ++
Sbjct: 91 QLRSVDPATFHGLGRLHT---LHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDT 147
Query: 576 FSGLSSLEILDLSKNKISGV 595
F L +L L L N+IS V
Sbjct: 148 FRDLGNLTHLFLHGNRISSV 167
Score = 37.0 bits (84), Expect = 0.060, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 2/115 (1%)
Query: 429 PVTFSRLLNLQGLGLAFNKLARSIPDEICH-LAKLDKLILHGNKFSGAIPSCSGNLTSLR 487
P F L LQ L L N L +++PD+ L L L LHGN+ S L SL
Sbjct: 121 PGLFRGLAALQYLYLQDNAL-QALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLD 179
Query: 488 ALYLGSNRFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRN 542
L L NR P +L ++ + +N+L + + L+ + L L+ N
Sbjct: 180 RLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 234
Score = 35.4 bits (80), Expect = 0.16, Method: Composition-based stats.
Identities = 45/168 (26%), Positives = 62/168 (36%), Gaps = 25/168 (14%)
Query: 431 TFSRLLNLQGLGLAFNKLARSIPDEICHLAKLDKLILHGN-KFSGAIPSCSGNLTSLRAL 489
+F NL L L N LAR LA L++L L N + P+ L L L
Sbjct: 50 SFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 109
Query: 490 YLGSNRFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRNNLSGDIP 549
+L P L + + + N+L L D
Sbjct: 110 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQA---------------------LPDD-- 146
Query: 550 ITIGGLKNLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNKISGVIP 597
T L NL LFL NR+ +F GL SL+ L L +N+++ V P
Sbjct: 147 -TFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHP 193
Score = 30.0 bits (66), Expect = 5.9, Method: Composition-based stats.
Identities = 43/162 (26%), Positives = 57/162 (35%), Gaps = 24/162 (14%)
Query: 429 PVTFSRLLNLQGLGLAFNKLARSIPDEICHLAKLDKLILHGNKFSGAIPSCSGNLTSLRA 488
P TF L L L L L P LA L L L N +L +L
Sbjct: 97 PATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTH 156
Query: 489 LYLGSNRFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRNNLSGDI 548
L+L NR +S V + G SLD L L +N ++
Sbjct: 157 LFLHGNRISS----------------VPERAFRGLHSLD--------RLLLHQNRVAHVH 192
Query: 549 PITIGGLKNLQKLFLANNRLEGPIPESFSGLSSLEILDLSKN 590
P L L L+L N L E+ + L +L+ L L+ N
Sbjct: 193 PHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 234
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 40.0 bits (92), Expect = 0.007, Method: Composition-based stats.
Identities = 41/140 (29%), Positives = 60/140 (42%), Gaps = 7/140 (5%)
Query: 460 AKLDKLILHGNKFSGAIPSCSGNLTSLRALYLGSNRFTSALPSTIWNLKDILFFDVSSN- 518
A ++ LHGN+ S + +L L+L SN + L + D+S N
Sbjct: 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNA 91
Query: 519 ---SLDGPLSLDIGNLKVVIELNLSRNNLSGDIPITIGGLKNLQKLFLANNRLEGPIPES 575
S+D +G L L+L R L P GL LQ L+L +N L+ ++
Sbjct: 92 QLRSVDPATFHGLGRLHT---LHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDT 148
Query: 576 FSGLSSLEILDLSKNKISGV 595
F L +L L L N+IS V
Sbjct: 149 FRDLGNLTHLFLHGNRISSV 168
Score = 37.0 bits (84), Expect = 0.061, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 2/115 (1%)
Query: 429 PVTFSRLLNLQGLGLAFNKLARSIPDEICH-LAKLDKLILHGNKFSGAIPSCSGNLTSLR 487
P F L LQ L L N L +++PD+ L L L LHGN+ S L SL
Sbjct: 122 PGLFRGLAALQYLYLQDNAL-QALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLD 180
Query: 488 ALYLGSNRFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRN 542
L L NR P +L ++ + +N+L + + L+ + L L+ N
Sbjct: 181 RLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 235
Score = 35.4 bits (80), Expect = 0.17, Method: Composition-based stats.
Identities = 45/168 (26%), Positives = 62/168 (36%), Gaps = 25/168 (14%)
Query: 431 TFSRLLNLQGLGLAFNKLARSIPDEICHLAKLDKLILHGN-KFSGAIPSCSGNLTSLRAL 489
+F NL L L N LAR LA L++L L N + P+ L L L
Sbjct: 51 SFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110
Query: 490 YLGSNRFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRNNLSGDIP 549
+L P L + + + N+L L D
Sbjct: 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQA---------------------LPDD-- 147
Query: 550 ITIGGLKNLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNKISGVIP 597
T L NL LFL NR+ +F GL SL+ L L +N+++ V P
Sbjct: 148 -TFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHP 194
Score = 30.0 bits (66), Expect = 6.1, Method: Composition-based stats.
Identities = 43/162 (26%), Positives = 57/162 (35%), Gaps = 24/162 (14%)
Query: 429 PVTFSRLLNLQGLGLAFNKLARSIPDEICHLAKLDKLILHGNKFSGAIPSCSGNLTSLRA 488
P TF L L L L L P LA L L L N +L +L
Sbjct: 98 PATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTH 157
Query: 489 LYLGSNRFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRNNLSGDI 548
L+L NR +S V + G SLD L L +N ++
Sbjct: 158 LFLHGNRISS----------------VPERAFRGLHSLD--------RLLLHQNRVAHVH 193
Query: 549 PITIGGLKNLQKLFLANNRLEGPIPESFSGLSSLEILDLSKN 590
P L L L+L N L E+ + L +L+ L L+ N
Sbjct: 194 PHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 235
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 40.0 bits (92), Expect = 0.007, Method: Composition-based stats.
Identities = 58/234 (24%), Positives = 93/234 (39%), Gaps = 39/234 (16%)
Query: 726 DRFSKNNLLGIGSFGSVYVA------RLQDGMEVAVKVFHQ----RYERALKSFQDECEV 775
DR + LG G+FG V A + VAVK+ + RAL S E ++
Sbjct: 28 DRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS---ELKI 84
Query: 776 MKRI-RHRNLVKIISACSNDDFKAL-IMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVA 833
+ I H N+V ++ AC+ + I+E+ G+L L S ++ +
Sbjct: 85 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDF 144
Query: 834 LALEYL-----------HFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQL 870
L LE+L F S IH +A I DF +A+ +
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX 204
Query: 871 SMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGE 923
+ + +MAPE + + DV+S+G++L E F+ G P + I E
Sbjct: 205 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 258
>pdb|2Z62|A Chain A, Crystal Structure Of The Tv3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z65|A Chain A, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
pdb|2Z65|B Chain B, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
Length = 276
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 552 IGGLKNLQKLFLANNRLEG-PIPESFSGLSSLEILDLSKNKISGVIPT 598
IG LK L++L +A+N ++ +PE FS L++LE LDLS NKI + T
Sbjct: 120 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 167
Score = 31.6 bits (70), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 103/253 (40%), Gaps = 46/253 (18%)
Query: 235 NLPYLVR-LTLATNNLVGVVPFTIFNMSTLKKLSL-------LENTLWGSLPSRIDLSLP 286
NLP+ + L L+ N L + ++ F+ L+ L L +E+ + SL L L
Sbjct: 25 NLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILT 84
Query: 287 NVEFLNLGTNRFSGNIPSSITNASKLTVFQLRGNSFSGFIPNTIGNLRNLEFLNIADNYL 346
+L FSG +++ KL + S F IG+L+ L+ LN+A N +
Sbjct: 85 GNPIQSLALGAFSG-----LSSLQKLVAVETNLASLENF---PIGHLKTLKELNVAHNLI 136
Query: 347 TS-STPELSFLSSLTNCQKIRVLILAGNPLDGILPSSIGNLSISLERFQMFNCRISGKIP 405
S PE + S+LTN + L L+ N + I + + R+ ++P
Sbjct: 137 QSFKLPE--YFSNLTN---LEHLDLSSNKIQSIYCTDL---------------RVLHQMP 176
Query: 406 QVISXXXXXXXXXXXXXXXXXSIPVTFSRLLNLQGLGLAFNKLARSIPDEIC-HLAKLDK 464
+ P F + L+ L L N+L +S+PD I L L K
Sbjct: 177 LLNLSLDLSLNPMNFIQ------PGAFKE-IRLKELALDTNQL-KSVPDGIFDRLTSLQK 228
Query: 465 LILHGNKFSGAIP 477
+ LH N + + P
Sbjct: 229 IWLHTNPWDCSCP 241
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 40.0 bits (92), Expect = 0.007, Method: Composition-based stats.
Identities = 53/205 (25%), Positives = 86/205 (41%), Gaps = 29/205 (14%)
Query: 734 LGIGSFGSVYVARLQDGME-VAVKVFHQRYERAL---KSFQDECEVMKRIRHRNLVKIIS 789
LG G++G V +A + E VAVK+ + RA+ ++ + E + + H N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDCPENIKKEICINAMLNHENVVKFYG 72
Query: 790 ACSNDDFKALIMEYMPNGSLENRLYSGTCMLDI-FQRL--NIMIDVALALEYLHFGHSTP 846
+ + L +EY G L +R+ M + QR +M V YLH
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH---GIG 125
Query: 847 IIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVS 894
I H + ISDF +A ++ + + T+ Y+APE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 895 TRG-DVYSYGIMLMETFTGKKPTDE 918
DV+S GI+L G+ P D+
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 40.0 bits (92), Expect = 0.007, Method: Composition-based stats.
Identities = 59/232 (25%), Positives = 98/232 (42%), Gaps = 31/232 (13%)
Query: 734 LGIGSFGSV-YVARLQDGMEVAVK--VFHQRYERALKSFQDECEVMKRIRHRNLVKIISA 790
LG G F V V L DG A+K + H++ +R + Q E ++ + H N++++++
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDR--EEAQREADMHRLFNHPNILRLVAY 94
Query: 791 CSNDDFKA----LIMEYMPNGSLEN---RLYSGTCMLDIFQRLNIMIDVALALEYLH--- 840
C + L++ + G+L N RL L Q L +++ + LE +H
Sbjct: 95 CLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG 154
Query: 841 FGHSTPIIHYMVAHISDFSIAKFLNGQDQL------SMQTQTL-------ATIGYMAPE- 886
+ H ++ + L +Q S Q TL TI Y APE
Sbjct: 155 YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPEL 214
Query: 887 YGVQGR--VSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPI 936
+ VQ + R DV+S G +L G+ P D +F S++ V + L I
Sbjct: 215 FSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSI 266
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 40.0 bits (92), Expect = 0.007, Method: Composition-based stats.
Identities = 36/119 (30%), Positives = 55/119 (46%), Gaps = 9/119 (7%)
Query: 182 PSTLSKCKQLEGLYLRFNNLSGAIP----KEIGNLTKLKDIILNDNELRGEIPQEMGNLP 237
P L+ LYL+ NNL A+P +++GNLT L L+ N + L
Sbjct: 121 PGLFRGLAALQYLYLQDNNLQ-ALPDNTFRDLGNLTHL---FLHGNRIPSVPEHAFRGLH 176
Query: 238 YLVRLTLATNNLVGVVPFTIFNMSTLKKLSLLENTLWGSLPSRIDLSLPNVEFLNLGTN 296
L RL L N++ V P ++ L L L N L LP+ + + L ++++L L N
Sbjct: 177 SLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNL-SMLPAEVLVPLRSLQYLRLNDN 234
Score = 38.5 bits (88), Expect = 0.020, Method: Composition-based stats.
Identities = 39/140 (27%), Positives = 60/140 (42%), Gaps = 7/140 (5%)
Query: 460 AKLDKLILHGNKFSGAIPSCSGNLTSLRALYLGSNRFTSALPSTIWNLKDILFFDVSSNS 519
A ++ LHGN+ S + + +L L+L SN + L + D+S N+
Sbjct: 31 ASSQRIFLHGNRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNA 90
Query: 520 ----LDGPLSLDIGNLKVVIELNLSRNNLSGDIPITIGGLKNLQKLFLANNRLEGPIPES 575
+D +G+L L+L R L P GL LQ L+L +N L+ +
Sbjct: 91 QLRVVDPTTFRGLGHLHT---LHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNT 147
Query: 576 FSGLSSLEILDLSKNKISGV 595
F L +L L L N+I V
Sbjct: 148 FRDLGNLTHLFLHGNRIPSV 167
Score = 38.1 bits (87), Expect = 0.028, Method: Composition-based stats.
Identities = 44/139 (31%), Positives = 56/139 (40%), Gaps = 5/139 (3%)
Query: 462 LDKLILHGNKFSGAIPSCSGNLTSLRALYLGSN-RFTSALPSTIWNLKDI--LFFDVSSN 518
L L LH N +G + LT L L L N + P+T L + L D
Sbjct: 57 LTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGHLHTLHLDRCGL 116
Query: 519 SLDGPLSLDIGNLKVVIELNLSRNNLSGDIPITIGGLKNLQKLFLANNRLEGPIPESFSG 578
GP L + L L NNL T L NL LFL NR+ +F G
Sbjct: 117 QELGPGLFR--GLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRG 174
Query: 579 LSSLEILDLSKNKISGVIP 597
L SL+ L L +N ++ V P
Sbjct: 175 LHSLDRLLLHQNHVARVHP 193
Score = 37.0 bits (84), Expect = 0.054, Method: Composition-based stats.
Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 3/122 (2%)
Query: 475 AIPSCSGNLTSLRALYLGSNRFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVV 534
A+P+ G S + ++L NR + ++ + +++ + SN+L G + L ++
Sbjct: 24 AVPT--GIPASSQRIFLHGNRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLL 81
Query: 535 IELNLSRN-NLSGDIPITIGGLKNLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNKIS 593
+L+LS N L P T GL +L L L L+ P F GL++L+ L L N +
Sbjct: 82 EQLDLSDNAQLRVVDPTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQ 141
Query: 594 GV 595
+
Sbjct: 142 AL 143
Score = 33.5 bits (75), Expect = 0.57, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 431 TFSRLLNLQGLGLAFNKLARSIPDEICH-LAKLDKLILHGNKFSGAIPSCSGNLTSLRAL 489
TF L NL L L N++ S+P+ L LD+L+LH N + P +L L L
Sbjct: 147 TFRDLGNLTHLFLHGNRIP-SVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTL 205
Query: 490 YLGSNRFTSALPSTI 504
YL +N S LP+ +
Sbjct: 206 YLFANNL-SMLPAEV 219
Score = 32.3 bits (72), Expect = 1.5, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 64/166 (38%), Gaps = 4/166 (2%)
Query: 357 SSLTNCQKIRVLILAGNPLDGILPSSIGNLSISLERFQMF-NCRISGKIPQVISXXXXXX 415
+S +C+ + +L L N L GI ++ L++ LE+ + N ++ P
Sbjct: 49 ASFQSCRNLTILWLHSNALAGIDAAAFTGLTL-LEQLDLSDNAQLRVVDPTTFRGLGHLH 107
Query: 416 XXXXXXXXXXXSIPVTFSRLLNLQGLGLAFNKLARSIPDEICH-LAKLDKLILHGNKFSG 474
P F L LQ L L N L +++PD L L L LHGN+
Sbjct: 108 TLHLDRCGLQELGPGLFRGLAALQYLYLQDNNL-QALPDNTFRDLGNLTHLFLHGNRIPS 166
Query: 475 AIPSCSGNLTSLRALYLGSNRFTSALPSTIWNLKDILFFDVSSNSL 520
L SL L L N P +L ++ + +N+L
Sbjct: 167 VPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNL 212
>pdb|3ULA|A Chain A, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
pdb|3ULA|C Chain C, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
Length = 279
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 552 IGGLKNLQKLFLANNRLEG-PIPESFSGLSSLEILDLSKNKISGVIPT 598
IG LK L++L +A+N ++ +PE FS L++LE LDLS NKI + T
Sbjct: 122 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 169
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 102/256 (39%), Gaps = 52/256 (20%)
Query: 235 NLPYLVR-LTLATNNLVGVVPFTIFNMSTLKKLSL-------LENTLWGSLPSRIDLSLP 286
NLP+ + L L+ N L + ++ F+ L+ L L +E+ + SL L L
Sbjct: 27 NLPFSTKNLDLSWNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILT 86
Query: 287 NVEFLNLGTNRFSGNIPSSITNASKLTVFQLRGNSFSGFIPNTIGNLRNLEFLNIADNYL 346
+L FSG +++ KL + S F IG+L+ L+ LN+A N +
Sbjct: 87 GNPIQSLALGAFSG-----LSSLQKLVAVETNLASLENF---PIGHLKTLKELNVAHNLI 138
Query: 347 TS-STPELSFLSSLTNCQKIRVLILAGNPLDGILPSSIGNLSISLERFQMFNC---RISG 402
S PE + S+LTN + +L +S + Q C R+
Sbjct: 139 QSFKLPE--YFSNLTN---------------------LEHLDLSSNKIQSIYCTDLRVLH 175
Query: 403 KIPQVISXXXXXXXXXXXXXXXXXSIPVTFSRLLNLQGLGLAFNKLARSIPDEIC-HLAK 461
++P + P F + L+ L L N+L +S+PD I L
Sbjct: 176 QMPLLNLSLDLSLNPMNFIQ------PGAFKE-IRLKELALDTNQL-KSVPDGIFDRLTS 227
Query: 462 LDKLILHGNKFSGAIP 477
L K+ LH N + + P
Sbjct: 228 LQKIWLHTNPWDCSCP 243
>pdb|3UL7|A Chain A, Crystal Structure Of The Tv3 Mutant F63w
Length = 278
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 552 IGGLKNLQKLFLANNRLEG-PIPESFSGLSSLEILDLSKNKISGVIPT 598
IG LK L++L +A+N ++ +PE FS L++LE LDLS NKI + T
Sbjct: 121 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 168
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 102/256 (39%), Gaps = 52/256 (20%)
Query: 235 NLPYLVR-LTLATNNLVGVVPFTIFNMSTLKKLSL-------LENTLWGSLPSRIDLSLP 286
NLP+ + L L+ N L + ++ F+ L+ L L +E+ + SL L L
Sbjct: 26 NLPFSTKNLDLSWNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILT 85
Query: 287 NVEFLNLGTNRFSGNIPSSITNASKLTVFQLRGNSFSGFIPNTIGNLRNLEFLNIADNYL 346
+L FSG +++ KL + S F IG+L+ L+ LN+A N +
Sbjct: 86 GNPIQSLALGAFSG-----LSSLQKLVAVETNLASLENF---PIGHLKTLKELNVAHNLI 137
Query: 347 TS-STPELSFLSSLTNCQKIRVLILAGNPLDGILPSSIGNLSISLERFQMFNC---RISG 402
S PE + S+LTN + +L +S + Q C R+
Sbjct: 138 QSFKLPE--YFSNLTN---------------------LEHLDLSSNKIQSIYCTDLRVLH 174
Query: 403 KIPQVISXXXXXXXXXXXXXXXXXSIPVTFSRLLNLQGLGLAFNKLARSIPDEIC-HLAK 461
++P + P F + L+ L L N+L +S+PD I L
Sbjct: 175 QMPLLNLSLDLSLNPMNFIQ------PGAFKE-IRLKELALDTNQL-KSVPDGIFDRLTS 226
Query: 462 LDKLILHGNKFSGAIP 477
L K+ LH N + + P
Sbjct: 227 LQKIWLHTNPWDCSCP 242
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 721 LLQATDRFSKNNLLGIGSFGSVYVARLQDGMEV-AVKVFHQRYERAL-----KSFQDECE 774
LL+ ++ +G GS+G V VA + A+K+ ++ R + + + E
Sbjct: 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVR 80
Query: 775 VMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRL------YSGTCMLDIFQ 824
+MK++ H N+ ++ ++ + L+ME G L ++L +G C +D+ +
Sbjct: 81 LMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVK 136
>pdb|3UL9|A Chain A, Structure Of The Tv3 Mutant M41e
Length = 278
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 552 IGGLKNLQKLFLANNRLEG-PIPESFSGLSSLEILDLSKNKISGVIPT 598
IG LK L++L +A+N ++ +PE FS L++LE LDLS NKI + T
Sbjct: 121 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 168
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 103/253 (40%), Gaps = 46/253 (18%)
Query: 235 NLPYLVR-LTLATNNLVGVVPFTIFNMSTLKKLSL-------LENTLWGSLPSRIDLSLP 286
NLP+ + L L+ N L + ++ F+ L+ L L +E+ + SL L L
Sbjct: 26 NLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILT 85
Query: 287 NVEFLNLGTNRFSGNIPSSITNASKLTVFQLRGNSFSGFIPNTIGNLRNLEFLNIADNYL 346
+L FSG +++ KL + S F IG+L+ L+ LN+A N +
Sbjct: 86 GNPIQSLALGAFSG-----LSSLQKLVAVETNLASLENF---PIGHLKTLKELNVAHNLI 137
Query: 347 TS-STPELSFLSSLTNCQKIRVLILAGNPLDGILPSSIGNLSISLERFQMFNCRISGKIP 405
S PE + S+LTN + L L+ N + I + + R+ ++P
Sbjct: 138 QSFKLPE--YFSNLTN---LEHLDLSSNKIQSIYCTDL---------------RVLHQMP 177
Query: 406 QVISXXXXXXXXXXXXXXXXXSIPVTFSRLLNLQGLGLAFNKLARSIPDEIC-HLAKLDK 464
+ P F + L+ L L N+L +S+PD I L L K
Sbjct: 178 LLNLSLDLSLNPMNFIQ------PGAFKE-IRLKELALDTNQL-KSVPDGIFDRLTSLQK 229
Query: 465 LILHGNKFSGAIP 477
+ LH N + + P
Sbjct: 230 IWLHTNPWDCSCP 242
>pdb|2Z7X|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 520
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 86/198 (43%), Gaps = 22/198 (11%)
Query: 173 GRNMFHGKIPSTLSKCKQLEGLYLRFNN--LSGAIPKEIGNLTKLKDIILNDNELR--GE 228
G M H PS +S L+L F+N L+ + + G+LT+L+ +IL N+L+ +
Sbjct: 311 GTRMVHMLCPSKISP-----FLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSK 365
Query: 229 IPQEMGNLPYLVRLTLATNNLV-----GVVPFTIFNMSTLKKLSLLENTLWGSLPSRIDL 283
I + + L +L ++ N++ G +T +S ++L +T++ LP
Sbjct: 366 IAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP----- 420
Query: 284 SLPNVEFLNLGTNRFSGNIPSSITNASKLTVFQLRGNSFSGFIPNTIGNLRNLEFLNIAD 343
P ++ L+L +N+ IP + L + N L +L+ + +
Sbjct: 421 --PRIKVLDLHSNKIKS-IPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHT 477
Query: 344 NYLTSSTPELSFLSSLTN 361
N S P + +LS N
Sbjct: 478 NPWDCSCPRIDYLSRWLN 495
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 441 LGLAFNKLARSIPDEICHLAKLDKLILHGNKFS--GAIPSCSGNLTSLRALYLGSNR--F 496
L + N L ++ + HL +L+ LIL N+ I + + SL+ L + N +
Sbjct: 329 LDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSY 388
Query: 497 TSALPSTIWNLKDILFFDVSSNSL-DGPLSLDIGNLKVVIELNLSRNNLSGDIPITIGGL 555
W K +L ++SSN L D +KV L+L N + IP + L
Sbjct: 389 DEKKGDCSWT-KSLLSLNMSSNILTDTIFRCLPPRIKV---LDLHSNKIKS-IPKQVVKL 443
Query: 556 KNLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNKISGVIP 597
+ LQ+L +A+N+L+ F L+SL+ + L N P
Sbjct: 444 EALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 485
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 427 SIPVTFSRLLNLQGLGLAFNKLARSIPDEIC-HLAKLDKLILHGNKFSGAIP 477
SIP +L LQ L +A N+L +S+PD I L L K+ LH N + + P
Sbjct: 435 SIPKQVVKLEALQELNVASNQL-KSVPDGIFDRLTSLQKIWLHTNPWDCSCP 485
Score = 29.6 bits (65), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 535 IELNLSRNNLSGDIPITIGGLKNLQKLFLANNRLE--GPIPESFSGLSSLEILDLSKNKI 592
+ L+ S N L+ + G L L+ L L N+L+ I E + + SL+ LD+S+N +
Sbjct: 327 LHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSV 386
Query: 593 S 593
S
Sbjct: 387 S 387
>pdb|3UL8|A Chain A, Crystal Structure Of The Tv3 Mutant V134l
Length = 279
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 552 IGGLKNLQKLFLANNRLEG-PIPESFSGLSSLEILDLSKNKISGVIPT 598
IG LK L++L +A+N ++ +PE FS L++LE LDLS NKI + T
Sbjct: 122 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 169
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 102/256 (39%), Gaps = 52/256 (20%)
Query: 235 NLPYLVR-LTLATNNLVGVVPFTIFNMSTLKKLSL-------LENTLWGSLPSRIDLSLP 286
NLP+ + L L+ N L + ++ F+ L+ L L +E+ + SL L L
Sbjct: 27 NLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILT 86
Query: 287 NVEFLNLGTNRFSGNIPSSITNASKLTVFQLRGNSFSGFIPNTIGNLRNLEFLNIADNYL 346
+L FSG +++ KL + S F IG+L+ L+ LN+A N +
Sbjct: 87 GNPIQSLALGAFSG-----LSSLQKLVALETNLASLENF---PIGHLKTLKELNVAHNLI 138
Query: 347 TS-STPELSFLSSLTNCQKIRVLILAGNPLDGILPSSIGNLSISLERFQMFNC---RISG 402
S PE + S+LTN + +L +S + Q C R+
Sbjct: 139 QSFKLPE--YFSNLTN---------------------LEHLDLSSNKIQSIYCTDLRVLH 175
Query: 403 KIPQVISXXXXXXXXXXXXXXXXXSIPVTFSRLLNLQGLGLAFNKLARSIPDEIC-HLAK 461
++P + P F + L+ L L N+L +S+PD I L
Sbjct: 176 QMPLLNLSLDLSLNPMNFIQ------PGAFKE-IRLKELALDTNQL-KSVPDGIFDRLTS 227
Query: 462 LDKLILHGNKFSGAIP 477
L K+ LH N + + P
Sbjct: 228 LQKIWLHTNPWDCSCP 243
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 85/202 (42%), Gaps = 23/202 (11%)
Query: 731 NNLLGIGSFGSVYVARLQDGMEV-AVKVFHQRYERALKSFQDECE-VMKRI-----RHRN 783
+ +LG GSFG V++A + + A+K + + L EC V KR+ H
Sbjct: 22 HKMLGKGSFGKVFLAEFKKTNQFFAIKALKK--DVVLMDDDVECTMVEKRVLSLAWEHPF 79
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGH 843
L + + +MEY+ G L + S D+ + ++ L L++LH
Sbjct: 80 LTHMFCTFQTKENLFFVMEYLNGGDLMYHIQS-CHKFDLSRATFYAAEIILGLQFLH--- 135
Query: 844 STPIIHY-------MVAHISDFSIAKFLNGQDQLSMQTQT---LATIGYMAPEYGVQGRV 893
S I++ ++ IA F ++ + +T T Y+APE + +
Sbjct: 136 SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKY 195
Query: 894 STRGDVYSYGIMLMETFTGKKP 915
+ D +S+G++L E G+ P
Sbjct: 196 NHSVDWWSFGVLLYEMLIGQSP 217
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 87/214 (40%), Gaps = 40/214 (18%)
Query: 728 FSKNNLLGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQD--ECEVMKRIRHRNLV 785
F +LLG G++G V A + E+ + +++ L + + E +++K +H N++
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII 72
Query: 786 KIISACSNDDFKALIMEYMPNGSLENRLYS--GTCMLD-------IFQRL---------- 826
I + D F+ Y+ ++ L+ T ML I+Q L
Sbjct: 73 TIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSN 132
Query: 827 ---------NIMIDVALALEYLHFGHSTPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTL 877
N++I+ L+ FG +A I D S A Q S T+ +
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFG---------LARIIDESAADNSEPTGQQSGMTEXV 183
Query: 878 ATIGYMAPEYGVQGRVSTRG-DVYSYGIMLMETF 910
AT Y APE + +R DV+S G +L E F
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 54/119 (45%), Gaps = 4/119 (3%)
Query: 479 CSGNLTSLRALYLGSNRFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELN 538
C T L + SN+ LP I L+ D + +L + ++ N K + ++
Sbjct: 4 CPTECTCLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFTL---VPKELSNYKHLTLID 60
Query: 539 LSRNNLSGDIPITIGGLKNLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNKISGVIP 597
LS N +S + + L L L+ NRL P +F GL SL +L L N IS V+P
Sbjct: 61 LSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDIS-VVP 118
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 39.3 bits (90), Expect = 0.010, Method: Composition-based stats.
Identities = 54/212 (25%), Positives = 90/212 (42%), Gaps = 24/212 (11%)
Query: 724 ATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVK-VFHQRYERALK-SFQDECEVMKRI- 779
AT R+ +G+G++G+VY AR G VA+K V E L S E +++R+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 780 --RHRNLVKIISAC--SNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALA 835
H N+V+++ C S D + + + + R Y I +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 836 LEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLSMQTQTLATIGYM 883
L L F H+ I+H + ++DF +A+ + Q L + T+ Y
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALD---PVVVTLWYR 178
Query: 884 APEYGVQGRVSTRGDVYSYGIMLMETFTGKKP 915
APE +Q +T D++S G + E F +KP
Sbjct: 179 APEVLLQSTYATPVDMWSVGCIFAEMFR-RKP 209
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 39.3 bits (90), Expect = 0.010, Method: Composition-based stats.
Identities = 58/234 (24%), Positives = 93/234 (39%), Gaps = 42/234 (17%)
Query: 726 DRFSKNNLLGIGSFGSVYVA------RLQDGMEVAVKVFHQ----RYERALKSFQDECEV 775
DR + LG G+FG V A + VAVK+ + RAL S E ++
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMS---ELKI 83
Query: 776 MKRI-RHRNLVKIISACSNDDFKAL-IMEYMPNGSLENRLYSGTC-----------MLDI 822
+ I H N+V ++ AC+ + I+E+ G+L L S L +
Sbjct: 84 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTL 143
Query: 823 FQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQL 870
+ VA +E+L S IH +A I DF +A+ +
Sbjct: 144 EHLIXYSFQVAKGMEFLA---SRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDY 200
Query: 871 SMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGE 923
+ + +MAPE + + DV+S+G++L E F+ G P + I E
Sbjct: 201 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 254
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Query: 432 FSRLLNLQGLGLAFNKLARSIPDEIC-HLAKLDKLILHGNKFSGAIPSCSGNLTSLRALY 490
F L L LGLA N+LA S+P + HL +LDKL L GN+ LT L+ L
Sbjct: 79 FDDLTELGTLGLANNQLA-SLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELR 137
Query: 491 LGSNRFTSALPSTIWNLKDILFFDVSSNSL 520
L +N+ S L ++ +S+N L
Sbjct: 138 LNTNQLQSIPAGAFDKLTNLQTLSLSTNQL 167
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 63/163 (38%), Gaps = 24/163 (14%)
Query: 430 VTFSRLLNLQGLGLAFNKLARSIPDEICHLAKLDKLILHGNKFSGAIPSCSGNLTSLRAL 489
TF L L L L +N+L L +L L L N+ + +LT L L
Sbjct: 53 ATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKL 112
Query: 490 YLGSNRFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRNNLSGDIP 549
YLG N+ S LPS +++ L + EL L+ N L
Sbjct: 113 YLGGNQLKS-LPSGVFD-----------------------RLTKLKELRLNTNQLQSIPA 148
Query: 550 ITIGGLKNLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNKI 592
L NLQ L L+ N+L+ +F L L+ + L N+
Sbjct: 149 GAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQF 191
Score = 34.3 bits (77), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 38/82 (46%)
Query: 190 QLEGLYLRFNNLSGAIPKEIGNLTKLKDIILNDNELRGEIPQEMGNLPYLVRLTLATNNL 249
QL+ LYL N L LTKLK++ LN N+L+ L L L+L+TN L
Sbjct: 108 QLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQL 167
Query: 250 VGVVPFTIFNMSTLKKLSLLEN 271
V + L+ ++L N
Sbjct: 168 QSVPHGAFDRLGKLQTITLFGN 189
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 69/167 (41%), Gaps = 3/167 (1%)
Query: 192 EGLYLRFNNLSGAIPKEIGNLTKLKDIILNDNELRGEIPQEMGNLPYLVRLTLATNNLVG 251
E L L+ L+ LTKL + L+ N+L+ +L L L LA NN +
Sbjct: 38 EKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA-NNQLA 96
Query: 252 VVPFTIFN-MSTLKKLSLLENTLWGSLPSRIDLSLPNVEFLNLGTNRFSGNIPSSITNAS 310
+P +F+ ++ L KL L N L SLPS + L ++ L L TN+ + +
Sbjct: 97 SLPLGVFDHLTQLDKLYLGGNQL-KSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLT 155
Query: 311 KLTVFQLRGNSFSGFIPNTIGNLRNLEFLNIADNYLTSSTPELSFLS 357
L L N L L+ + + N S E+ +LS
Sbjct: 156 NLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSRCEILYLS 202
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 80/199 (40%), Gaps = 37/199 (18%)
Query: 276 SLPSRIDLSLPNVEFLNLGTNRFSGNIPSSITNASKLTVFQLRGNSFSGFIPNTIGNLRN 335
S+PS I + E L+L + + ++ +KLT L N +L
Sbjct: 28 SVPSGIP---ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTE 84
Query: 336 LEFLNIADNYLTSSTPELSFLSSLTNCQKIRVLILAGNPLDGILPSSIGNLSISLERFQM 395
L L +A+N L +S P L LT K L L GN L LPS + + L+ ++
Sbjct: 85 LGTLGLANNQL-ASLP-LGVFDHLTQLDK---LYLGGNQLKS-LPSGVFDRLTKLKELRL 138
Query: 396 FNCRISGKIPQVISXXXXXXXXXXXXXXXXXSIPV-TFSRLLNLQGLGLAFNKLARSIPD 454
++ SIP F +L NLQ L L+ N+L +S+P
Sbjct: 139 NTNQLQ-------------------------SIPAGAFDKLTNLQTLSLSTNQL-QSVPH 172
Query: 455 -EICHLAKLDKLILHGNKF 472
L KL + L GN+F
Sbjct: 173 GAFDRLGKLQTITLFGNQF 191
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 39.3 bits (90), Expect = 0.012, Method: Composition-based stats.
Identities = 52/206 (25%), Positives = 86/206 (41%), Gaps = 21/206 (10%)
Query: 734 LGIGSFGSVYVAR-LQDGMEVAVKVFH--QRYERALKSFQDECEVMKRIRHRNLVKIISA 790
+G G+F V +AR + G EVAVK+ Q +L+ E + K + H N+VK+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEV 81
Query: 791 CSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIH- 849
+ L+ EY G + + L + + R + A++Y H I+H
Sbjct: 82 IETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR-QIVSAVQYC---HQKFIVHR 137
Query: 850 ------YMVAHISDFSIAKFLNGQDQLSMQTQTLATIG---YMAPEYGVQGRV--STRGD 898
++ + IA F ++ + + A G Y APE QG+ D
Sbjct: 138 DLKAENLLLDADXNIKIADF-GFSNEFTFGNKLDAFCGAPPYAAPEL-FQGKKYDGPEVD 195
Query: 899 VYSYGIMLMETFTGKKPTDEIFIGEL 924
V+S G++L +G P D + EL
Sbjct: 196 VWSLGVILYTLVSGSLPFDGQNLKEL 221
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Query: 432 FSRLLNLQGLGLAFNKLARSIPDEIC-HLAKLDKLILHGNKFSGAIPSCSGNLTSLRALY 490
F L L LGLA N+LA S+P + HL +LDKL L GN+ LT L+ L
Sbjct: 79 FDDLTELGTLGLANNQLA-SLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELR 137
Query: 491 LGSNRFTSALPSTIWNLKDILFFDVSSNSL 520
L +N+ S L ++ +S+N L
Sbjct: 138 LNTNQLQSIPAGAFDKLTNLQTLSLSTNQL 167
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 63/163 (38%), Gaps = 24/163 (14%)
Query: 430 VTFSRLLNLQGLGLAFNKLARSIPDEICHLAKLDKLILHGNKFSGAIPSCSGNLTSLRAL 489
TF L L L L +N+L L +L L L N+ + +LT L L
Sbjct: 53 ATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKL 112
Query: 490 YLGSNRFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRNNLSGDIP 549
YLG N+ S LPS +++ L + EL L+ N L
Sbjct: 113 YLGGNQLKS-LPSGVFD-----------------------RLTKLKELRLNTNQLQSIPA 148
Query: 550 ITIGGLKNLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNKI 592
L NLQ L L+ N+L+ +F L L+ + L N+
Sbjct: 149 GAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQF 191
Score = 33.9 bits (76), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 38/82 (46%)
Query: 190 QLEGLYLRFNNLSGAIPKEIGNLTKLKDIILNDNELRGEIPQEMGNLPYLVRLTLATNNL 249
QL+ LYL N L LTKLK++ LN N+L+ L L L+L+TN L
Sbjct: 108 QLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQL 167
Query: 250 VGVVPFTIFNMSTLKKLSLLEN 271
V + L+ ++L N
Sbjct: 168 QSVPHGAFDRLGKLQTITLFGN 189
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 80/199 (40%), Gaps = 37/199 (18%)
Query: 276 SLPSRIDLSLPNVEFLNLGTNRFSGNIPSSITNASKLTVFQLRGNSFSGFIPNTIGNLRN 335
S+PS I + E L+L + + ++ +KLT L N +L
Sbjct: 28 SVPSGIP---ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTE 84
Query: 336 LEFLNIADNYLTSSTPELSFLSSLTNCQKIRVLILAGNPLDGILPSSIGNLSISLERFQM 395
L L +A+N L +S P L LT K L L GN L LPS + + L+ ++
Sbjct: 85 LGTLGLANNQL-ASLP-LGVFDHLTQLDK---LYLGGNQLKS-LPSGVFDRLTKLKELRL 138
Query: 396 FNCRISGKIPQVISXXXXXXXXXXXXXXXXXSIPV-TFSRLLNLQGLGLAFNKLARSIPD 454
++ SIP F +L NLQ L L+ N+L +S+P
Sbjct: 139 NTNQLQ-------------------------SIPAGAFDKLTNLQTLSLSTNQL-QSVPH 172
Query: 455 -EICHLAKLDKLILHGNKF 472
L KL + L GN+F
Sbjct: 173 GAFDRLGKLQTITLFGNQF 191
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 68/167 (40%), Gaps = 3/167 (1%)
Query: 192 EGLYLRFNNLSGAIPKEIGNLTKLKDIILNDNELRGEIPQEMGNLPYLVRLTLATNNLVG 251
E L L+ L+ LTKL + L+ N+L+ +L L L LA NN +
Sbjct: 38 EKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA-NNQLA 96
Query: 252 VVPFTIFN-MSTLKKLSLLENTLWGSLPSRIDLSLPNVEFLNLGTNRFSGNIPSSITNAS 310
+P +F+ ++ L KL L N L SLPS + L ++ L L TN+ + +
Sbjct: 97 SLPLGVFDHLTQLDKLYLGGNQL-KSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLT 155
Query: 311 KLTVFQLRGNSFSGFIPNTIGNLRNLEFLNIADNYLTSSTPELSFLS 357
L L N L L+ + + N S E +LS
Sbjct: 156 NLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSRCETLYLS 202
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 39.3 bits (90), Expect = 0.013, Method: Composition-based stats.
Identities = 58/234 (24%), Positives = 95/234 (40%), Gaps = 42/234 (17%)
Query: 726 DRFSKNNLLGIGSFGSVYVA------RLQDGMEVAVKVFHQ----RYERALKSFQDECEV 775
DR + LG G+FG V A + VAVK+ + RAL S E ++
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMS---ELKI 83
Query: 776 MKRI-RHRNLVKIISACSNDDFKAL-IMEYMPNGSLENRLYSGTCML----DIFQRLNIM 829
+ I H N+V ++ AC+ + I+E+ G+L L S D+++ +
Sbjct: 84 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTL 143
Query: 830 -------IDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQL 870
VA +E+L S IH +A I DF +A+ +
Sbjct: 144 EHLICYSFQVAKGMEFLA---SRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 200
Query: 871 SMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGE 923
+ + +MAPE + + DV+S+G++L E F+ G P + I E
Sbjct: 201 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 254
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 80/205 (39%), Gaps = 24/205 (11%)
Query: 728 FSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRN 783
F LLG G+FG V + R + G A+K+ + + + E V++ RH
Sbjct: 10 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 69
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGH 843
L + A D +MEY G L L + R ++ ALEYL H
Sbjct: 70 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYL---H 125
Query: 844 STPIIHYMVA------------HISDFSIAKFLNG-QDQLSMQTQTLATIGYMAPEYGVQ 890
S +++ + I+DF + K G D +M+T T Y+APE
Sbjct: 126 SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKT-FCGTPEYLAPEVLED 182
Query: 891 GRVSTRGDVYSYGIMLMETFTGKKP 915
D + G+++ E G+ P
Sbjct: 183 NDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 87/214 (40%), Gaps = 40/214 (18%)
Query: 728 FSKNNLLGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQD--ECEVMKRIRHRNLV 785
F +LLG G++G V A + E+ + +++ L + + E +++K +H N++
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII 72
Query: 786 KIISACSNDDFKALIMEYMPNGSLENRLYS--GTCMLD-------IFQRL---------- 826
I + D F+ Y+ ++ L+ T ML I+Q L
Sbjct: 73 TIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSN 132
Query: 827 ---------NIMIDVALALEYLHFGHSTPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTL 877
N++I+ L+ FG +A I D S A Q S T+ +
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFG---------LARIIDESAADNSEPTGQQSGMTEYV 183
Query: 878 ATIGYMAPEYGVQGRVSTRG-DVYSYGIMLMETF 910
AT Y APE + +R DV+S G +L E F
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 90/228 (39%), Gaps = 47/228 (20%)
Query: 722 LQATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRYERALKSFQDECEVMKRIR 780
L+ F + +LG G+FG V AR D A+K E+ L + E ++ +
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEK-LSTILSEVMLLASLN 60
Query: 781 H-------------RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTC--MLDIFQR 825
H RN VK ++A + MEY N +L + ++S D + R
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWR 120
Query: 826 LNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQ-DQLSM 872
L I LE L + HS IIH + I DF +AK ++ D L +
Sbjct: 121 LFRQI-----LEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKL 175
Query: 873 QTQTL-----------ATIGYMAPEY-GVQGRVSTRGDVYSYGIMLME 908
+Q L T Y+A E G + + D+YS GI+ E
Sbjct: 176 DSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFE 223
>pdb|3B2D|A Chain A, Crystal Structure Of Human Rp105MD-1 Complex
pdb|3B2D|B Chain B, Crystal Structure Of Human Rp105MD-1 Complex
Length = 603
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 69/163 (42%), Gaps = 5/163 (3%)
Query: 430 VTFSRLLNLQGLGLAFNKLARSIPDEICHLAKLDKLILHGNKFSGAIPSCSGNLTSLRAL 489
TF LQ L L L + +P + L L KL+L N F + N SL L
Sbjct: 269 TTFQCFTQLQELDLTATHL-KGLPSGMKGLNLLKKLVLSVNHFDQLCQISAANFPSLTHL 327
Query: 490 YLGSNRFTSALP-STIWNLKDILFFDVSSNSLDGP--LSLDIGNLKVVIELNLSRNNLSG 546
Y+ N L + L ++ D+S N ++ SL + NL + LNLS N G
Sbjct: 328 YIRGNVKKLHLGVGCLEKLGNLQTLDLSHNDIEASDCCSLQLKNLSHLQTLNLSHNEPLG 387
Query: 547 DIPITIGGLKNLQKLFLANNRLEGPIPES-FSGLSSLEILDLS 588
L+ L LA RL P+S F L L++L+L+
Sbjct: 388 LQSQAFKECPQLELLDLAFTRLHINAPQSPFQNLHFLQVLNLT 430
>pdb|4FCG|A Chain A, Structure Of The Leucine-Rich Repeat Domain Of The Type
Iii Effector Xcv3220 (Xopl)
Length = 328
Score = 38.9 bits (89), Expect = 0.014, Method: Composition-based stats.
Identities = 48/172 (27%), Positives = 76/172 (44%), Gaps = 18/172 (10%)
Query: 428 IPVTFSRLLNLQGLGLAFNKLARSIPDEICHLAKLDKLILHGNKFSGAIPS------CSG 481
+P T + L+ L LA N L R++P I L +L +L + +P SG
Sbjct: 119 LPDTXQQFAGLETLTLARNPL-RALPASIASLNRLRELSIRACPELTELPEPLASTDASG 177
Query: 482 ------NLTSLRALYLGSNRFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVI 535
NL SLR + G +LP++I NL+++ + ++ L L I +L +
Sbjct: 178 EHQGLVNLQSLRLEWTG----IRSLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLE 232
Query: 536 ELNLSRNNLSGDIPITIGGLKNLQKLFLANNRLEGPIPESFSGLSSLEILDL 587
EL+L + P GG L++L L + +P L+ LE LDL
Sbjct: 233 ELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDL 284
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 88/216 (40%), Gaps = 41/216 (18%)
Query: 734 LGIGSFGSVYVA-RLQDGMEVAVKV----------FHQRYERALKSFQDECEVMKRIRHR 782
LG GSFG V +A + +VA+K H R ER E +K +RH
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVER-------EISYLKLLRHP 69
Query: 783 NLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFG 842
+++K+ + +++EY G L + + M + R + A+EY H
Sbjct: 70 HIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGR-RFFQQIICAIEYCH-- 125
Query: 843 HSTPIIHY------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQ 890
I+H + I+DF ++ + + L + + Y APE +
Sbjct: 126 -RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKT---SCGSPNYAAPEV-IN 180
Query: 891 GRVST--RGDVYSYGIMLMETFTGKKPTDEIFIGEL 924
G++ DV+S GI+L G+ P D+ FI L
Sbjct: 181 GKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL 216
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 38.5 bits (88), Expect = 0.017, Method: Composition-based stats.
Identities = 41/209 (19%), Positives = 82/209 (39%), Gaps = 24/209 (11%)
Query: 725 TDRFSKNNLLGIGSFGSVY-VARLQDGMEVAVKVFHQR--YERALKSFQDECEVMKRIRH 781
TD + LG G+F V ++ G E A K+ + + R + + E + + ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHF 841
N+V++ + S + F L+ + + G L+ + + + + LE ++
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGG----ELFEDIVAREYYSEADASHCIQQILESVNH 118
Query: 842 GHSTPIIHY---------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPE 886
H I+H ++DF +A + G Q T GY++PE
Sbjct: 119 CHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFA--GTPGYLSPE 176
Query: 887 YGVQGRVSTRGDVYSYGIMLMETFTGKKP 915
+ D+++ G++L G P
Sbjct: 177 VLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 38.5 bits (88), Expect = 0.017, Method: Composition-based stats.
Identities = 41/209 (19%), Positives = 82/209 (39%), Gaps = 24/209 (11%)
Query: 725 TDRFSKNNLLGIGSFGSVY-VARLQDGMEVAVKVFHQR--YERALKSFQDECEVMKRIRH 781
TD + LG G+F V ++ G E A K+ + + R + + E + + ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHF 841
N+V++ + S + F L+ + + G L+ + + + + LE ++
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGG----ELFEDIVAREYYSEADASHCIQQILESVNH 118
Query: 842 GHSTPIIHY---------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPE 886
H I+H ++DF +A + G Q T GY++PE
Sbjct: 119 CHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFA--GTPGYLSPE 176
Query: 887 YGVQGRVSTRGDVYSYGIMLMETFTGKKP 915
+ D+++ G++L G P
Sbjct: 177 VLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 38.5 bits (88), Expect = 0.017, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 853 AHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTG 912
A++ DF IA ++L+ T+ T+ Y APE + + R D+Y+ +L E TG
Sbjct: 173 AYLVDFGIAS-ATTDEKLTQLGNTVGTLYYXAPERFSESHATYRADIYALTCVLYECLTG 231
Query: 913 KKP 915
P
Sbjct: 232 SPP 234
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 38.5 bits (88), Expect = 0.017, Method: Composition-based stats.
Identities = 54/212 (25%), Positives = 90/212 (42%), Gaps = 24/212 (11%)
Query: 724 ATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVK-VFHQRYERALK-SFQDECEVMKRI- 779
AT R+ +G+G++G+VY AR G VA+K V E L S E +++R+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 780 --RHRNLVKIISAC--SNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALA 835
H N+V+++ C S D + + + + R Y I +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 836 LEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLSMQTQTLATIGYM 883
L L F H+ I+H + ++DF +A+ + Q L + T+ Y
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMAL---FPVVVTLWYR 178
Query: 884 APEYGVQGRVSTRGDVYSYGIMLMETFTGKKP 915
APE +Q +T D++S G + E F +KP
Sbjct: 179 APEVLLQSTYATPVDMWSVGCIFAEMFR-RKP 209
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 38.5 bits (88), Expect = 0.019, Method: Composition-based stats.
Identities = 52/215 (24%), Positives = 88/215 (40%), Gaps = 27/215 (12%)
Query: 724 ATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRYERALK-----SFQDECEVMK 777
AT R+ +G+G++G+VY AR G VA+K S E +++
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 778 RI---RHRNLVKIISAC--SNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDV 832
R+ H N+V+++ C S D + + + + R Y I +
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLM 126
Query: 833 ALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLSMQTQTLATI 880
L L F H+ I+H + ++DF +A+ + Q L T + T+
Sbjct: 127 RQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMAL---TPVVVTL 183
Query: 881 GYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKP 915
Y APE +Q +T D++S G + E F +KP
Sbjct: 184 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKP 217
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 38.5 bits (88), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 76/204 (37%), Gaps = 22/204 (10%)
Query: 728 FSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRN 783
F LLG G+FG V + R + G A+K+ + + + E V++ RH
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGH 843
L + A D +MEY G L L + R ++ ALEYL H
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYL---H 122
Query: 844 STPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQG 891
S +++ + I+DF + K G + T Y+APE
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDN 180
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
D + G+++ E G+ P
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 17/150 (11%)
Query: 231 QEMGNLPYLVRLTLATNNLVGVVPFTIFN-MSTLKKLSLLENTLWGSLPSRIDLSLPNVE 289
+E+ NL YL+ T N + +P +F+ ++ LK+L L+EN L SLP + L N+
Sbjct: 82 KELTNLTYLI----LTGNQLQSLPNGVFDKLTNLKELVLVENQL-QSLPDGVFDKLTNLT 136
Query: 290 FLNLGTNRFSGNIPSSITNA-SKLTVFQLRGNSFSGFIPNTIGNLRNLEFLNIADNYLTS 348
+L L N+ +P + + + LT L N L L+ L++ DN L
Sbjct: 137 YLYLYHNQLQS-LPKGVFDKLTNLTRLDLDNNQLQSLPEGVFDKLTQLKQLSLNDNQL-K 194
Query: 349 STPELSF--LSSLTNCQKIRVLILAGNPLD 376
S P+ F L+SLT+ + L NP D
Sbjct: 195 SVPDGVFDRLTSLTH------IWLLNNPWD 218
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 14/200 (7%)
Query: 305 SITNASKLTVFQLRGNSFSGFIPNT--IGNLRNLEFL-NIADNYLTSSTPELSFLSSLTN 361
S+T+A V Q NS I N I +++ +++L N+ YL +L +S+L
Sbjct: 30 SVTDA----VTQNELNSIDQIIANNSDIKSVQGIQYLPNV--RYLALGGNKLHDISALKE 83
Query: 362 CQKIRVLILAGNPLDGILPSSIGNLSISLERFQMFNCRISGKIPQVISXXXXXXXXXXXX 421
+ LIL GN L LP+ + + +L+ + ++ +P +
Sbjct: 84 LTNLTYLILTGNQLQS-LPNGVFDKLTNLKELVLVENQLQS-LPDGVFDKLTNLTYLYLY 141
Query: 422 XXXXXSIPV-TFSRLLNLQGLGLAFNKLARSIPDEIC-HLAKLDKLILHGNKFSGAIPSC 479
S+P F +L NL L L N+L +S+P+ + L +L +L L+ N+
Sbjct: 142 HNQLQSLPKGVFDKLTNLTRLDLDNNQL-QSLPEGVFDKLTQLKQLSLNDNQLKSVPDGV 200
Query: 480 SGNLTSLRALYLGSNRFTSA 499
LTSL ++L +N + A
Sbjct: 201 FDRLTSLTHIWLLNNPWDCA 220
Score = 30.4 bits (67), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 66/162 (40%), Gaps = 28/162 (17%)
Query: 435 LLNLQGLGLAFNKLARSIPDEICHLAKLDKLILHGNKFSGAIPSCSGNLTSLRALYLGSN 494
L N++ L L NKL + L L LIL GN+ LT+L+ L L N
Sbjct: 62 LPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVEN 119
Query: 495 RFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRNNLSGDIPITIGG 554
+ S LP + FD +N + L L N L
Sbjct: 120 QLQS-LPDGV--------FDKLTN---------------LTYLYLYHNQLQSLPKGVFDK 155
Query: 555 LKNLQKLFLANNRLEGPIPES-FSGLSSLEILDLSKNKISGV 595
L NL +L L NN+L+ +PE F L+ L+ L L+ N++ V
Sbjct: 156 LTNLTRLDLDNNQLQS-LPEGVFDKLTQLKQLSLNDNQLKSV 196
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 76/204 (37%), Gaps = 22/204 (10%)
Query: 728 FSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRN 783
F LLG G+FG V + R + G A+K+ + + + E V++ RH
Sbjct: 12 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 71
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGH 843
L + A D +MEY G L L + R ++ ALEYL H
Sbjct: 72 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYL---H 127
Query: 844 STPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQG 891
S +++ + I+DF + K G + T Y+APE
Sbjct: 128 SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDN 185
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
D + G+++ E G+ P
Sbjct: 186 DYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 38.1 bits (87), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 91/240 (37%), Gaps = 50/240 (20%)
Query: 726 DRFSKNNLLGIGSFGSVYVA------RLQDGMEVAVKVFHQ----RYERALKSFQDECEV 775
DR LG G+FG V A + VAVK+ + RAL S E ++
Sbjct: 64 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS---ELKI 120
Query: 776 MKRIRHR-NLVKIISACSNDDFKALIM------------------EYMPNGSLENRLYSG 816
+ I H N+V ++ AC+ +++ E++P LY
Sbjct: 121 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD 180
Query: 817 TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFL 864
L + + VA +E+L S IH +A I DF +A+ +
Sbjct: 181 --FLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDI 235
Query: 865 NGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGE 923
+ + +MAPE + + DV+S+G++L E F+ G P + I E
Sbjct: 236 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 295
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 38.1 bits (87), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 76/204 (37%), Gaps = 22/204 (10%)
Query: 728 FSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRN 783
F LLG G+FG V + R + G A+K+ + + + E V++ RH
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGH 843
L + A D +MEY G L L + R ++ ALEYL H
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYL---H 122
Query: 844 STPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQG 891
S +++ + I+DF + K G + T Y+APE
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDN 180
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
D + G+++ E G+ P
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 38.1 bits (87), Expect = 0.026, Method: Composition-based stats.
Identities = 51/205 (24%), Positives = 80/205 (39%), Gaps = 24/205 (11%)
Query: 728 FSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRN 783
F LLG G+FG V + R + G A+K+ + + + E V++ RH
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGH 843
L + A D +MEY G L L + R ++ ALEYL H
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYL---H 122
Query: 844 STPIIHYMVA------------HISDFSIAKFLNG-QDQLSMQTQTLATIGYMAPEYGVQ 890
S +++ + I+DF + K G D +M+T T Y+APE
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKT-FCGTPEYLAPEVLED 179
Query: 891 GRVSTRGDVYSYGIMLMETFTGKKP 915
D + G+++ E G+ P
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 38.1 bits (87), Expect = 0.026, Method: Composition-based stats.
Identities = 51/205 (24%), Positives = 80/205 (39%), Gaps = 24/205 (11%)
Query: 728 FSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRN 783
F LLG G+FG V + R + G A+K+ + + + E V++ RH
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGH 843
L + A D +MEY G L L + R ++ ALEYL H
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYL---H 122
Query: 844 STPIIHYMVA------------HISDFSIAKFLNG-QDQLSMQTQTLATIGYMAPEYGVQ 890
S +++ + I+DF + K G D +M+T T Y+APE
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKT-FCGTPEYLAPEVLED 179
Query: 891 GRVSTRGDVYSYGIMLMETFTGKKP 915
D + G+++ E G+ P
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 37.7 bits (86), Expect = 0.029, Method: Composition-based stats.
Identities = 40/209 (19%), Positives = 81/209 (38%), Gaps = 24/209 (11%)
Query: 725 TDRFSKNNLLGIGSFGSVY-VARLQDGMEVAVKVFHQR--YERALKSFQDECEVMKRIRH 781
TD + +G G+F V +L G E A K+ + + R + + E + + ++H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHF 841
N+V++ + S + F L+ + + G L+ + + + + LE +
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGG----ELFEDIVAREYYSEADASHCIQQILEAVLH 118
Query: 842 GHSTPIIHY---------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPE 886
H ++H ++DF +A + G Q T GY++PE
Sbjct: 119 CHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFA--GTPGYLSPE 176
Query: 887 YGVQGRVSTRGDVYSYGIMLMETFTGKKP 915
+ D+++ G++L G P
Sbjct: 177 VLRKEAYGKPVDIWACGVILYILLVGYPP 205
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 37.7 bits (86), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 92/221 (41%), Gaps = 27/221 (12%)
Query: 722 LQATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFH--QRYERALKSFQDECEVMKR 778
L + + F K +G G++G VY AR + G VA+K E + E ++K
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 779 IRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEY 838
+ H N+VK++ ++ L+ E++ S++ + + L I + L+
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 839 LHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPE 886
L F HS ++H + ++DF +A+ + + T+ Y APE
Sbjct: 119 LAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGV--PVRTYXHEVVTLWYRAPE 176
Query: 887 YGVQGR-VSTRGDVYSYGIMLMET------FTGKKPTDEIF 920
+ + ST D++S G + E F G D++F
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 217
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 37.7 bits (86), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 40/209 (19%), Positives = 81/209 (38%), Gaps = 24/209 (11%)
Query: 725 TDRFSKNNLLGIGSFGSVY-VARLQDGMEVAVKVFHQRY--ERALKSFQDECEVMKRIRH 781
TD + LG G+F V + E A K+ + + R + + E + + ++H
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKH 89
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHF 841
N+V++ + S + F L+ + + G L+ + + + + LE ++
Sbjct: 90 PNIVRLHDSISEEGFHYLVFDLVTGGE----LFEDIVAREYYSEADASHCIHQILESVNH 145
Query: 842 GHSTPIIHY---------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPE 886
H I+H ++DF +A + G+ Q T GY++PE
Sbjct: 146 IHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWF--GFAGTPGYLSPE 203
Query: 887 YGVQGRVSTRGDVYSYGIMLMETFTGKKP 915
+ D+++ G++L G P
Sbjct: 204 VLRKDPYGKPVDIWACGVILYILLVGYPP 232
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 37.7 bits (86), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 68/161 (42%), Gaps = 24/161 (14%)
Query: 772 ECEVMKRIRHRNLVKIISACS--NDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIM 829
E ++K++ H N+VK++ N+D ++ E + G + D Q
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSED--QARFYF 143
Query: 830 IDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTL 877
D+ +EYLH+ IIH + I+DF ++ G D ++ + T+
Sbjct: 144 QDLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSD--ALLSNTV 198
Query: 878 ATIGYMAPEYGVQGRVSTRG---DVYSYGIMLMETFTGKKP 915
T +MAPE + R G DV++ G+ L G+ P
Sbjct: 199 GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239
>pdb|2O6S|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
pdb|2O6S|B Chain B, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
Length = 208
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 4/117 (3%)
Query: 483 LTSLRALYLGSNRFTSALPSTIWN-LKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSR 541
LTSL LYLG N+ S LP+ ++N L + + ++S+N L + L + EL L+
Sbjct: 51 LTSLTQLYLGGNKLQS-LPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNT 109
Query: 542 NNLSGDIPITIGGLKNLQKLFLANNRLEGPIPES-FSGLSSLEILDLSKNKISGVIP 597
N L L L+ L L N+L+ +P+ F L+SL+ + L N P
Sbjct: 110 NQLQSLPDGVFDKLTQLKDLRLYQNQLKS-VPDGVFDRLTSLQYIWLHDNPWDCTCP 165
Score = 31.2 bits (69), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 212 LTKLKDIILNDNELRGEIPQEMGNLPYLVRLTLATNNLVGVVPFTIFNMSTLKKLSLLEN 271
LT+LK++ LN N+L+ L L L L N L VP +F+ T + L +
Sbjct: 99 LTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKS-VPDGVFDRLTSLQYIWLHD 157
Query: 272 TLWGSLPSRIDLSLPNVEFLNLGTNRFSGNIPSS 305
W D + P + +L+ N+ SG + +S
Sbjct: 158 NPW-------DCTCPGIRYLSEWINKHSGVVRNS 184
Score = 30.0 bits (66), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 5/125 (4%)
Query: 239 LVRLTLATNNLVGVVPFTIFN-MSTLKKLSLLENTLWGSLPSRIDLSLPNVEFLNLGTNR 297
L +L L N L + P +FN +++L L+L N L SLP+ + L ++ L L TN+
Sbjct: 54 LTQLYLGGNKLQSL-PNGVFNKLTSLTYLNLSTNQL-QSLPNGVFDKLTQLKELALNTNQ 111
Query: 298 FSGNIPSSITNA-SKLTVFQLRGNSFSGFIPNTIGNLRNLEFLNIADNYLTSSTPELSFL 356
++P + + ++L +L N L +L+++ + DN + P + +L
Sbjct: 112 LQ-SLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPGIRYL 170
Query: 357 SSLTN 361
S N
Sbjct: 171 SEWIN 175
Score = 30.0 bits (66), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 432 FSRLLNLQGLGLAFNKLARSIPDEIC-HLAKLDKLILHGNKFSGAIPSCSGNLTSLRALY 490
F +L L+ L L N+L +S+PD + L +L L L+ N+ LTSL+ ++
Sbjct: 96 FDKLTQLKELALNTNQL-QSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIW 154
Query: 491 LGSNRFTSALP 501
L N + P
Sbjct: 155 LHDNPWDCTCP 165
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 37.4 bits (85), Expect = 0.038, Method: Composition-based stats.
Identities = 48/204 (23%), Positives = 76/204 (37%), Gaps = 22/204 (10%)
Query: 728 FSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRN 783
F LLG G+FG V + R + G A+K+ + + + E V++ RH
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGH 843
L + A D +MEY G L L + R ++ ALEYL H
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYL---H 122
Query: 844 STPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQG 891
S +++ + I+DF + K G + T Y+APE
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDN 180
Query: 892 RVSTRGDVYSYGIMLMETFTGKKP 915
D + G+++ E G+ P
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 37.4 bits (85), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 81/212 (38%), Gaps = 33/212 (15%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQDECEVM-KRI---- 779
D F +LG GSFG V +AR+++ G AVKV + + L+ EC + KRI
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVL--KKDVILQDDDVECTMTEKRILSLA 80
Query: 780 -RHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEY 838
H L ++ D +ME++ G L + F A +
Sbjct: 81 RNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSR----RFDEARARFYAAEIISA 136
Query: 839 LHFGHSTPII------------HYMVAHISDFSIAK--FLNGQDQLSMQTQTL-ATIGYM 883
L F H II H ++DF + K NG + T T T Y+
Sbjct: 137 LMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG-----VTTATFCGTPDYI 191
Query: 884 APEYGVQGRVSTRGDVYSYGIMLMETFTGKKP 915
APE + D ++ G++L E G P
Sbjct: 192 APEILQEMLYGPAVDWWAMGVLLYEMLCGHAP 223
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 37.4 bits (85), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 95/240 (39%), Gaps = 50/240 (20%)
Query: 725 TDRFSKNNLLGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQ-------------D 771
++ + + LG G++G V + R KV H ERA+K + +
Sbjct: 36 SEMYQRVKKLGSGAYGEVLLCR--------DKVTH--VERAIKIIRKTSVSTSSNSKLLE 85
Query: 772 ECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMID 831
E V+K + H N++K+ + L+ME G L + + F ++ +
Sbjct: 86 EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMK----FNEVDAAVI 141
Query: 832 VALALEYLHFGHSTPIIHY---------------MVAHISDFSIAKFLNGQDQLSMQTQT 876
+ L + + H I+H + I DF ++ Q ++ +
Sbjct: 142 IKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMK---ER 198
Query: 877 LATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKP----TDEIFIGELSLSRWVND 932
L T Y+APE ++ + + DV+S G++L G P TD+ + ++ ++ D
Sbjct: 199 LGTAYYIAPEV-LRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFD 257
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 37.4 bits (85), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 92/221 (41%), Gaps = 27/221 (12%)
Query: 722 LQATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFH--QRYERALKSFQDECEVMKR 778
L + + F K +G G++G VY AR + G VA+K E + E ++K
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 779 IRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEY 838
+ H N+VK++ ++ L+ E++ S++ + + L I + L+
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 839 LHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPE 886
L F HS ++H + ++DF +A+ + + T+ Y APE
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYXHEVVTLWYRAPE 176
Query: 887 YGVQGR-VSTRGDVYSYGIMLMET------FTGKKPTDEIF 920
+ + ST D++S G + E F G D++F
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 217
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 37.4 bits (85), Expect = 0.045, Method: Composition-based stats.
Identities = 58/238 (24%), Positives = 94/238 (39%), Gaps = 46/238 (19%)
Query: 726 DRFSKNNLLGIGSFGSVYVA------RLQDGMEVAVKVFHQ----RYERALKSFQDECEV 775
DR LG G+FG V A + VAVK+ + RAL S E ++
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS---ELKI 83
Query: 776 MKRI-RHRNLVKIISACSNDDFKAL-IMEYMPNGSLENRLYSGTCML--------DIFQR 825
+ I H N+V ++ AC+ + I+E+ G+L L S D+++
Sbjct: 84 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD 143
Query: 826 LNIM-------IDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNG 866
+ VA +E+L S IH +A I DF +A+ +
Sbjct: 144 FLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXK 200
Query: 867 QDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGE 923
+ + +MAPE + + DV+S+G++L E F+ G P + I E
Sbjct: 201 DPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 258
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 37.4 bits (85), Expect = 0.045, Method: Composition-based stats.
Identities = 58/238 (24%), Positives = 94/238 (39%), Gaps = 46/238 (19%)
Query: 726 DRFSKNNLLGIGSFGSVYVA------RLQDGMEVAVKVFHQ----RYERALKSFQDECEV 775
DR LG G+FG V A + VAVK+ + RAL S E ++
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS---ELKI 74
Query: 776 MKRI-RHRNLVKIISACSNDDFKAL-IMEYMPNGSLENRLYSGTCML--------DIFQR 825
+ I H N+V ++ AC+ + I+E+ G+L L S D+++
Sbjct: 75 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD 134
Query: 826 LNIM-------IDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNG 866
+ VA +E+L S IH +A I DF +A+ +
Sbjct: 135 FLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXK 191
Query: 867 QDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGE 923
+ + +MAPE + + DV+S+G++L E F+ G P + I E
Sbjct: 192 DPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 249
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 37.4 bits (85), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 89/217 (41%), Gaps = 36/217 (16%)
Query: 727 RFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLV 785
R+ LG G G V+ A D VA+K +++K E ++++R+ H N+V
Sbjct: 12 RYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIV 71
Query: 786 KIISACS------NDDFKAL--------IMEYMPNGSLENRLYSGTCMLDIFQRLNIMID 831
K+ DD +L + EYM L N L G +L+ RL M
Sbjct: 72 KVFEILGPSGSQLTDDVGSLTELNSVYIVQEYM-ETDLANVLEQGP-LLEEHARL-FMYQ 128
Query: 832 VALALEYLHFGHSTPIIHY-------------MVAHISDFSIAKFLNGQ-DQLSMQTQTL 877
+ L+Y+ HS ++H +V I DF +A+ ++ ++ L
Sbjct: 129 LLRGLKYI---HSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGL 185
Query: 878 ATIGYMAPEYGVQGRVSTRG-DVYSYGIMLMETFTGK 913
T Y +P + T+ D+++ G + E TGK
Sbjct: 186 VTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 37.4 bits (85), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 85/223 (38%), Gaps = 38/223 (17%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY----ERAL--KSFQDECEVMKR 778
D + LG G F V R + G E A K +R R + + + E +++
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 64
Query: 779 IRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCML--DIFQRLNIMIDVALAL 836
IRH N++ + N LI+E + G L + L + + Q L ++D
Sbjct: 65 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDG---- 120
Query: 837 EYLHFGHSTPIIHYMVA----------------HISDFSIAKFLNGQDQLSMQTQTLATI 880
+H+ HS I H+ + + DF IA + ++ T
Sbjct: 121 --VHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFK---NIFGTP 175
Query: 881 GYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGE 923
++APE + D++S G++ +G P F+GE
Sbjct: 176 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP----FLGE 214
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 37.4 bits (85), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 85/223 (38%), Gaps = 38/223 (17%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY----ERAL--KSFQDECEVMKR 778
D + LG G F V R + G E A K +R R + + + E +++
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 71
Query: 779 IRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCML--DIFQRLNIMIDVALAL 836
IRH N++ + N LI+E + G L + L + + Q L ++D
Sbjct: 72 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDG---- 127
Query: 837 EYLHFGHSTPIIHYMVA----------------HISDFSIAKFLNGQDQLSMQTQTLATI 880
+H+ HS I H+ + + DF IA + ++ T
Sbjct: 128 --VHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFK---NIFGTP 182
Query: 881 GYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGE 923
++APE + D++S G++ +G P F+GE
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP----FLGE 221
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 37.0 bits (84), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 85/223 (38%), Gaps = 38/223 (17%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY----ERAL--KSFQDECEVMKR 778
D + LG G F V R + G E A K +R R + + + E +++
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILRE 85
Query: 779 IRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCML--DIFQRLNIMIDVALAL 836
IRH N++ + N LI+E + G L + L + + Q L ++D
Sbjct: 86 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDG---- 141
Query: 837 EYLHFGHSTPIIHYMVA----------------HISDFSIAKFLNGQDQLSMQTQTLATI 880
+H+ HS I H+ + + DF IA + ++ T
Sbjct: 142 --VHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFK---NIFGTP 196
Query: 881 GYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGE 923
++APE + D++S G++ +G P F+GE
Sbjct: 197 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP----FLGE 235
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 37.0 bits (84), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 92/221 (41%), Gaps = 27/221 (12%)
Query: 722 LQATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFH--QRYERALKSFQDECEVMKR 778
L + + F K +G G++G VY AR + G VA+K E + E ++K
Sbjct: 1 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 60
Query: 779 IRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEY 838
+ H N+VK++ ++ L+ E++ S++ + + L I + L+
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQLLQG 117
Query: 839 LHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPE 886
L F HS ++H + ++DF +A+ + + T+ Y APE
Sbjct: 118 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYXHEVVTLWYRAPE 175
Query: 887 YGVQGR-VSTRGDVYSYGIMLMET------FTGKKPTDEIF 920
+ + ST D++S G + E F G D++F
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 216
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 37.0 bits (84), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 91/219 (41%), Gaps = 27/219 (12%)
Query: 724 ATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFH--QRYERALKSFQDECEVMKRIR 780
+ + F K +G G++G VY AR + G VA+K E + E ++K +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH 840
H N+VK++ ++ L+ E++ S++ + + L I + L+ L
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 841 FGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYG 888
F HS ++H + ++DF +A+ + + T+ Y APE
Sbjct: 119 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGV--PVRTYXHEVVTLWYRAPEIL 176
Query: 889 VQGR-VSTRGDVYSYGIMLMET------FTGKKPTDEIF 920
+ + ST D++S G + E F G D++F
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 215
>pdb|1XCD|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 1
pdb|1XEC|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
pdb|1XEC|B Chain B, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
Length = 329
Score = 37.0 bits (84), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 69/164 (42%), Gaps = 4/164 (2%)
Query: 432 FSRLLNLQGLGLAFNKLARSIPDEICHLAKLDKLILHGNKFSGAIPSCSGNLTSLRALYL 491
F L NL L L NK+++ P L KL++L L N+ L LR +
Sbjct: 72 FKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELPEKMPKTLQELR---V 128
Query: 492 GSNRFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRNNLSGDIPIT 551
N T S L ++ ++ +N L ++ G + + +L+ R + I
Sbjct: 129 HENEITKVRKSVFNGLNQMIVVELGTNPLKSS-GIENGAFQGMKKLSYIRIADTNITTIP 187
Query: 552 IGGLKNLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNKISGV 595
G +L +L L N++ S GL++L L LS N IS V
Sbjct: 188 QGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAV 231
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 9/117 (7%)
Query: 479 CSGNLTSLRALYLGSNRFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELN 538
C +L ++ LG + LP D D+ +N + D NLK + L
Sbjct: 29 CQCHLRVVQCSDLGLEKVPKDLPP------DTALLDLQNNKITEIKDGDFKNLKNLHTLI 82
Query: 539 LSRNNLSGDIPITIGGLKNLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNKISGV 595
L N +S P L L++L+L+ N+L+ +PE +L+ L + +N+I+ V
Sbjct: 83 LINNKISKISPGAFAPLVKLERLYLSKNQLKE-LPEKMP--KTLQELRVHENEITKV 136
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 37.0 bits (84), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 83/202 (41%), Gaps = 17/202 (8%)
Query: 728 FSKNNLLGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQ----DECEVMKRIRHRN 783
F + +LG G FG V +++ ++ ++ + + +E ++++++ R
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 245
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLYS-GTCMLDIFQRLNIMIDVALALEYLH-- 840
+V + A D L++ M G L+ +Y G + + ++ LE LH
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE 305
Query: 841 ---FGHSTPIIHYMVAH----ISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRV 893
+ P + H ISD +A + + + + T+GYMAPE R
Sbjct: 306 RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR---VGTVGYMAPEVVKNERY 362
Query: 894 STRGDVYSYGIMLMETFTGKKP 915
+ D ++ G +L E G+ P
Sbjct: 363 TFSPDWWALGCLLYEMIAGQSP 384
>pdb|1XKU|A Chain A, Crystal Structure Of The Dimeric Protein Core Of Decorin,
The Archetypal Small Leucine-Rich Repeat Proteoglycan
Length = 330
Score = 37.0 bits (84), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 69/164 (42%), Gaps = 4/164 (2%)
Query: 432 FSRLLNLQGLGLAFNKLARSIPDEICHLAKLDKLILHGNKFSGAIPSCSGNLTSLRALYL 491
F L NL L L NK+++ P L KL++L L N+ L LR +
Sbjct: 72 FKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELPEKMPKTLQELR---V 128
Query: 492 GSNRFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRNNLSGDIPIT 551
N T S L ++ ++ +N L ++ G + + +L+ R + I
Sbjct: 129 HENEITKVRKSVFNGLNQMIVVELGTNPLKSS-GIENGAFQGMKKLSYIRIADTNITTIP 187
Query: 552 IGGLKNLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNKISGV 595
G +L +L L N++ S GL++L L LS N IS V
Sbjct: 188 QGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAV 231
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 9/117 (7%)
Query: 479 CSGNLTSLRALYLGSNRFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELN 538
C +L ++ LG + LP D D+ +N + D NLK + L
Sbjct: 29 CQCHLRVVQCSDLGLEKVPKDLPP------DTALLDLQNNKITEIKDGDFKNLKNLHTLI 82
Query: 539 LSRNNLSGDIPITIGGLKNLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNKISGV 595
L N +S P L L++L+L+ N+L+ +PE +L+ L + +N+I+ V
Sbjct: 83 LINNKISKISPGAFAPLVKLERLYLSKNQLKE-LPEKMP--KTLQELRVHENEITKV 136
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 37.0 bits (84), Expect = 0.058, Method: Composition-based stats.
Identities = 58/238 (24%), Positives = 94/238 (39%), Gaps = 46/238 (19%)
Query: 726 DRFSKNNLLGIGSFGSVYVA------RLQDGMEVAVKVFHQ----RYERALKSFQDECEV 775
DR LG G+FG V A + VAVK+ + RAL S E ++
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS---ELKI 85
Query: 776 MKRI-RHRNLVKIISACSNDDFKAL-IMEYMPNGSLENRLYSGTCML--------DIFQR 825
+ I H N+V ++ AC+ + I+E+ G+L L S D+++
Sbjct: 86 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKD 145
Query: 826 LNIM-------IDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNG 866
+ VA +E+L S IH +A I DF +A+ +
Sbjct: 146 FLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 202
Query: 867 QDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGE 923
+ + +MAPE + + DV+S+G++L E F+ G P + I E
Sbjct: 203 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 260
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 37.0 bits (84), Expect = 0.058, Method: Composition-based stats.
Identities = 58/238 (24%), Positives = 94/238 (39%), Gaps = 46/238 (19%)
Query: 726 DRFSKNNLLGIGSFGSVYVA------RLQDGMEVAVKVFHQ----RYERALKSFQDECEV 775
DR LG G+FG V A + VAVK+ + RAL S E ++
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS---ELKI 83
Query: 776 MKRI-RHRNLVKIISACSNDDFKAL-IMEYMPNGSLENRLYSGTCML--------DIFQR 825
+ I H N+V ++ AC+ + I+E+ G+L L S D+++
Sbjct: 84 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD 143
Query: 826 LNIM-------IDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNG 866
+ VA +E+L S IH +A I DF +A+ +
Sbjct: 144 FLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 200
Query: 867 QDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGE 923
+ + +MAPE + + DV+S+G++L E F+ G P + I E
Sbjct: 201 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 258
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 37.0 bits (84), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 86/214 (40%), Gaps = 40/214 (18%)
Query: 728 FSKNNLLGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQD--ECEVMKRIRHRNLV 785
F +LLG G++G V A + E+ + +++ L + + E +++K +H N++
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII 72
Query: 786 KIISACSNDDFKALIMEYMPNGSLENRLYS--GTCMLD-------IFQRL---------- 826
I + D F+ Y+ ++ L+ T ML I+Q L
Sbjct: 73 TIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSN 132
Query: 827 ---------NIMIDVALALEYLHFGHSTPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTL 877
N++I+ L+ FG +A I D S A Q S + +
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFG---------LARIIDESAADNSEPTGQQSGMVEFV 183
Query: 878 ATIGYMAPEYGVQGRVSTRG-DVYSYGIMLMETF 910
AT Y APE + +R DV+S G +L E F
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 37.0 bits (84), Expect = 0.059, Method: Composition-based stats.
Identities = 58/238 (24%), Positives = 94/238 (39%), Gaps = 46/238 (19%)
Query: 726 DRFSKNNLLGIGSFGSVYVA------RLQDGMEVAVKVFHQ----RYERALKSFQDECEV 775
DR LG G+FG V A + VAVK+ + RAL S E ++
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS---ELKI 83
Query: 776 MKRI-RHRNLVKIISACSNDDFKAL-IMEYMPNGSLENRLYSGTCML--------DIFQR 825
+ I H N+V ++ AC+ + I+E+ G+L L S D+++
Sbjct: 84 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD 143
Query: 826 LNIM-------IDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNG 866
+ VA +E+L S IH +A I DF +A+ +
Sbjct: 144 FLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 200
Query: 867 QDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGE 923
+ + +MAPE + + DV+S+G++L E F+ G P + I E
Sbjct: 201 DPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 258
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 37.0 bits (84), Expect = 0.060, Method: Composition-based stats.
Identities = 57/238 (23%), Positives = 94/238 (39%), Gaps = 46/238 (19%)
Query: 726 DRFSKNNLLGIGSFGSVYVA------RLQDGMEVAVKVFHQ----RYERALKSFQDECEV 775
DR LG G+FG V A + VAVK+ + RAL S E ++
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS---ELKI 74
Query: 776 MKRI-RHRNLVKIISACSNDDFKALIM-EYMPNGSLENRLYSGTCML--------DIFQR 825
+ I H N+V ++ AC+ +++ E+ G+L L S D+++
Sbjct: 75 LIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD 134
Query: 826 LNIM-------IDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNG 866
+ VA +E+L S IH +A I DF +A+ +
Sbjct: 135 FLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXK 191
Query: 867 QDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGE 923
+ + +MAPE + + DV+S+G++L E F+ G P + I E
Sbjct: 192 DPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 249
>pdb|4FHO|A Chain A, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
pdb|4FHO|B Chain B, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
Length = 231
Score = 37.0 bits (84), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 68/162 (41%), Gaps = 36/162 (22%)
Query: 437 NLQGLGLAFNKLARSIPDEICHLAKLDKLILHGNKFSGAIPSCSGNLTSLRALYLGSNRF 496
NL GL L N++ P + +L K+ +L L GN S L S++ L L S +
Sbjct: 70 NLIGLELKDNQITDLTP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKTLDLTSTQI 125
Query: 497 TSALP-STIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRNNLSGDIPITIGGL 555
T P + + NL+ +L+ D++ + PL+ GL
Sbjct: 126 TDVTPLAGLSNLQ-VLYLDLNQITNISPLA----------------------------GL 156
Query: 556 KNLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNKISGVIP 597
NLQ L + NN++ P + LS L L NKIS + P
Sbjct: 157 TNLQYLSIGNNQVNDLTP--LANLSKLTTLRADDNKISDISP 196
Score = 34.3 bits (77), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 95/230 (41%), Gaps = 29/230 (12%)
Query: 278 PSRIDLSLPNVEFLN-LGTNRFSGNIPSSITNA-----SKLTVFQLRGNSFSGFIPNTIG 331
P+ I++ P+ N + T N+ ++T A + L+ F + G I
Sbjct: 12 PTPINVIFPDPALANAVKTATGKSNVTDAVTQADLDGIATLSAFNTGVTTIEG-----IQ 66
Query: 332 NLRNLEFLNIADNYLTSSTPELSFLSSLTNCQKIRVLILAGNPLDGILPSSIGNLSISLE 391
L NL L + DN +T TP L N KI L L+GNPL + S+I L S++
Sbjct: 67 YLNNLIGLELKDNQITDLTP-------LKNLTKITELELSGNPLKNV--SAIAGLQ-SIK 116
Query: 392 RFQMFNCRISGKIPQVISXXXXXXXXXXXXXXXXXSIPVTFSRLLNLQGLGLAFNKLARS 451
+ + +I+ P ++ P + L NLQ L + N++
Sbjct: 117 TLDLTSTQITDVTP--LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNNQVNDL 172
Query: 452 IPDEICHLAKLDKLILHGNKFSGAIPSCSGNLTSLRALYLGSNRFTSALP 501
P + +L+KL L NK S P S L +L ++L N+ + P
Sbjct: 173 TP--LANLSKLTTLRADDNKISDISPLAS--LPNLIEVHLKDNQISDVSP 218
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 36.6 bits (83), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 83/202 (41%), Gaps = 17/202 (8%)
Query: 728 FSKNNLLGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQ----DECEVMKRIRHRN 783
F + +LG G FG V +++ ++ ++ + + +E ++++++ R
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 245
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLYS-GTCMLDIFQRLNIMIDVALALEYLH-- 840
+V + A D L++ M G L+ +Y G + + ++ LE LH
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE 305
Query: 841 ---FGHSTPIIHYMVAH----ISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRV 893
+ P + H ISD +A + + + + T+GYMAPE R
Sbjct: 306 RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR---VGTVGYMAPEVVKNERY 362
Query: 894 STRGDVYSYGIMLMETFTGKKP 915
+ D ++ G +L E G+ P
Sbjct: 363 TFSPDWWALGCLLYEMIAGQSP 384
>pdb|3A79|B Chain B, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
Length = 562
Score = 36.6 bits (83), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 6/142 (4%)
Query: 459 LAKLDKLILHGNKFSG--AIPSCSGNLTSLRALYLGSNRFTS-ALPSTIWNLKDILFFDV 515
L +L LIL N + + N++SL L + N S A T + IL ++
Sbjct: 376 LKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNL 435
Query: 516 SSNSLDGPLSLDIGNLKVVIELNLSRNNLSGDIPITIGGLKNLQKLFLANNRLEGPIPES 575
SSN L G + + V++L+ NN IP + L+ LQ+L +A+N+L+
Sbjct: 436 SSNMLTGSVFRCLPPKVKVLDLH---NNRIMSIPKDVTHLQALQELNVASNQLKSVPDGV 492
Query: 576 FSGLSSLEILDLSKNKISGVIP 597
F L+SL+ + L N P
Sbjct: 493 FDRLTSLQYIWLHDNPWDCTCP 514
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 84/216 (38%), Gaps = 37/216 (17%)
Query: 92 SSLETLDLSHNKLSGNIPSSIFNMHTLKLLDFRDNQL--FGSLSSFIFNMSSMLGIDLSI 149
SS L+ + N + ++ + L+ L + N L F ++ NMSS+ +D+S+
Sbjct: 353 SSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSL 412
Query: 150 NRFSGELPANICXXXXXXXXXXXGRNMFHGKIPSTLSKCKQLEGLYLRFNNLSGAIPKEI 209
N + C NM G + L ++ L+ NN +IPK++
Sbjct: 413 NSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLPPKVKVLDLH---NNRIMSIPKDV 469
Query: 210 GNLTKLKDIILNDNELRGEIPQEMGNLPYLVRLTLATNNLVGVVPFTIFNMSTLKKLSLL 269
+L L+++ + N+L+ VP +F+ T + L
Sbjct: 470 THLQALQELNVASNQLKS-------------------------VPDGVFDRLTSLQYIWL 504
Query: 270 ENTLWGSLPSRIDLSLPNVEFLNLGTNRFSGNIPSS 305
+ W D + P + +L+ N+ SG + +S
Sbjct: 505 HDNPW-------DCTCPGIRYLSEWINKHSGVVRNS 533
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 70/166 (42%), Gaps = 7/166 (4%)
Query: 199 NNLSGAIPKEIGNLTKLKDIILNDNELRG--EIPQEMGNLPYLVRLTLATNNL-VGVVPF 255
N + ++ + L +L+ +IL N L+ ++ N+ L L ++ N+L
Sbjct: 363 NVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDR 422
Query: 256 TIFNMSTLKKLSLLENTLWGSLPSRIDLSLPNVEFLNLGTNRFSGNIPSSITNASKLTVF 315
T ++ L+L N L GS+ + P V+ L+L NR IP +T+ L
Sbjct: 423 TCAWAESILVLNLSSNMLTGSVFRCLP---PKVKVLDLHNNRIMS-IPKDVTHLQALQEL 478
Query: 316 QLRGNSFSGFIPNTIGNLRNLEFLNIADNYLTSSTPELSFLSSLTN 361
+ N L +L+++ + DN + P + +LS N
Sbjct: 479 NVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPGIRYLSEWIN 524
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 36.6 bits (83), Expect = 0.073, Method: Composition-based stats.
Identities = 49/222 (22%), Positives = 81/222 (36%), Gaps = 49/222 (22%)
Query: 770 QDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLN-- 827
+ E ++ RHRN++ + + + + +I E++ SG LDIF+R+N
Sbjct: 49 KKEISILNIARHRNILHLHESFESMEELVMIFEFI----------SG---LDIFERINTS 95
Query: 828 --------IMIDVALALEYLHFGHSTPIIHYMV--------------AHISDFSIAKFLN 865
I+ V E L F HS I H+ + I +F A+ L
Sbjct: 96 AFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLK 155
Query: 866 GQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKP---------T 916
D + Y APE VST D++S G ++ +G P
Sbjct: 156 PGDNFRL---LFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQII 212
Query: 917 DEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYFAAKE 958
+ I E + + I M+ +D L+ + A E
Sbjct: 213 ENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASE 254
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 36.6 bits (83), Expect = 0.075, Method: Composition-based stats.
Identities = 50/224 (22%), Positives = 88/224 (39%), Gaps = 53/224 (23%)
Query: 728 FSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVK 786
F + L+G G FG V+ A+ + DG ++ E+A + E + + ++ H N+V
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKA----EREVKALAKLDHVNIVH 69
Query: 787 IISAC----------SNDDFKALIMEYMPNGSLENRLYSGTCMLD-------------IF 823
+ C S+D ++ +Y P S + C+ I
Sbjct: 70 -YNGCWDGFDYDPETSDDSLES--SDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIE 126
Query: 824 QRLNIMIDVALALEYLH-------FGHSTPIIH--------YMV----AHISDFSIAKFL 864
+R +D LALE + HS +IH ++V I DF + L
Sbjct: 127 KRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSL 186
Query: 865 NGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLME 908
+ +T++ T+ YM+PE D+Y+ G++L E
Sbjct: 187 KNDGK---RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAE 227
>pdb|1P9A|G Chain G, Crystal Structure Of N-terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-alpha At 1.7 Angstrom
Resolution
pdb|1QYY|A Chain A, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
pdb|1QYY|G Chain G, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
Length = 290
Score = 36.6 bits (83), Expect = 0.078, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 41/81 (50%)
Query: 194 LYLRFNNLSGAIPKEIGNLTKLKDIILNDNELRGEIPQEMGNLPYLVRLTLATNNLVGVV 253
L + FN L+ + L +L+++ L NEL+ P + P L +L+LA NNL +
Sbjct: 105 LDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELP 164
Query: 254 PFTIFNMSTLKKLSLLENTLW 274
+ + L L L EN+L+
Sbjct: 165 AGLLNGLENLDTLLLQENSLY 185
Score = 33.9 bits (76), Expect = 0.47, Method: Composition-based stats.
Identities = 39/115 (33%), Positives = 51/115 (44%), Gaps = 7/115 (6%)
Query: 481 GNLTSLRALYLGSNRFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELN-- 538
G L L L L N+ S LP L + DVS N L SL +G L+ + EL
Sbjct: 74 GTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLT---SLPLGALRGLGELQEL 129
Query: 539 -LSRNNLSGDIPITIGGLKNLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNKI 592
L N L P + L+KL LANN L +GL +L+ L L +N +
Sbjct: 130 YLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSL 184
Score = 33.1 bits (74), Expect = 0.82, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 60/147 (40%), Gaps = 20/147 (13%)
Query: 244 LATNNLVGVVPFTIFNMSTLKKLSLLENTLWGSLP--SRIDLS-------------LPNV 288
L T +L ++P+T L + L + + G+LP +DLS LP +
Sbjct: 43 LYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPAL 102
Query: 289 EFLNLGTNRFSGNIPSSITNASKLTVFQLRGNSFSGFIPNTIGNLRNLEFLNIADNYLTS 348
L++ NR + ++ +L L+GN P + LE L++A+N LT
Sbjct: 103 TVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTE 162
Query: 349 STPELSFLSSLTNCQKIRVLILAGNPL 375
L L + + L+L N L
Sbjct: 163 LPAGL-----LNGLENLDTLLLQENSL 184
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 36.6 bits (83), Expect = 0.079, Method: Composition-based stats.
Identities = 57/238 (23%), Positives = 94/238 (39%), Gaps = 46/238 (19%)
Query: 726 DRFSKNNLLGIGSFGSVYVA------RLQDGMEVAVKVFHQ----RYERALKSFQDECEV 775
DR LG G+FG V A + VAVK+ + RAL S E ++
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS---ELKI 74
Query: 776 MKRI-RHRNLVKIISACSNDDFKALIM-EYMPNGSLENRLYSGTCML--------DIFQR 825
+ I H N+V ++ AC+ +++ E+ G+L L S D+++
Sbjct: 75 LIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD 134
Query: 826 LNIM-------IDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNG 866
+ VA +E+L S IH +A I DF +A+ +
Sbjct: 135 FLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 191
Query: 867 QDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGE 923
+ + +MAPE + + DV+S+G++L E F+ G P + I E
Sbjct: 192 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 249
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 36.6 bits (83), Expect = 0.079, Method: Composition-based stats.
Identities = 57/238 (23%), Positives = 94/238 (39%), Gaps = 46/238 (19%)
Query: 726 DRFSKNNLLGIGSFGSVYVA------RLQDGMEVAVKVFHQ----RYERALKSFQDECEV 775
DR LG G+FG V A + VAVK+ + RAL S E ++
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS---ELKI 74
Query: 776 MKRI-RHRNLVKIISACSNDDFKALIM-EYMPNGSLENRLYSGTCML--------DIFQR 825
+ I H N+V ++ AC+ +++ E+ G+L L S D+++
Sbjct: 75 LIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD 134
Query: 826 LNIM-------IDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNG 866
+ VA +E+L S IH +A I DF +A+ +
Sbjct: 135 FLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 191
Query: 867 QDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGE 923
+ + +MAPE + + DV+S+G++L E F+ G P + I E
Sbjct: 192 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 249
>pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
pdb|3J0A|B Chain B, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
Length = 844
Score = 36.2 bits (82), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 69/145 (47%), Gaps = 27/145 (18%)
Query: 462 LDKLILHGNKFSGAIPSCSGNLT-----SLRALYLGSNRFTSALPSTI-WN----LKDIL 511
L LIL+ N+FS SCSG+ T SL L+LG N A + + W+ L +
Sbjct: 428 LQILILNQNRFS----SCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQ 483
Query: 512 FFDVSSNSLDGPLSLDIGNLKVVIELNLSRNNLS----GDIPITIGGLKNLQKLFLANNR 567
++ N L+ +L + L+L+ N L+ D+P NL+ L ++ N+
Sbjct: 484 VLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP------ANLEILDISRNQ 537
Query: 568 LEGPIPESFSGLSSLEILDLSKNKI 592
L P P+ F LS +LD++ NK
Sbjct: 538 LLAPNPDVFVSLS---VLDITHNKF 559
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%)
Query: 531 LKVVIELNLSRNNLSGDIPITIGGLKNLQKLFLANNRLEGPIPESFSGLSSLEILDLSKN 590
LK + LNL+ N ++ GL NLQ L L+ N L +F GL + +DL KN
Sbjct: 289 LKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKN 348
Query: 591 KIS 593
I+
Sbjct: 349 HIA 351
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 36.2 bits (82), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 23/197 (11%)
Query: 734 LGIGSFGSVYVA-RLQDGMEVAVKVFHQRYERAL--KSFQDECEVMKRIRHRNLVKIISA 790
+G G++G+V A + G +VA+K ++ ++ L K E ++K +RH N++ ++
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 791 CSND----DFK--ALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHS 844
+ D DF L+M +M G+ +L + + R+ + V L+ L + H+
Sbjct: 93 FTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLGE--DRIQFL--VYQMLKGLRYIHA 146
Query: 845 TPIIHY-------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQG-RVSTR 896
IIH V + I F + S + T Y APE + R +
Sbjct: 147 AGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTRWYRAPEVILNWMRYTQT 206
Query: 897 GDVYSYGIMLMETFTGK 913
D++S G ++ E TGK
Sbjct: 207 VDIWSVGCIMAEMITGK 223
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 36.2 bits (82), Expect = 0.088, Method: Composition-based stats.
Identities = 50/217 (23%), Positives = 90/217 (41%), Gaps = 27/217 (12%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFH--QRYERALKSFQDECEVMKRIRHR 782
+ F K +G G++G VY AR + G VA+K E + E ++K + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 783 NLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFG 842
N+VK++ ++ L+ E++ + + + I L I + L+ L F
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPL-IKSYLFQLLQGLAFC 119
Query: 843 HSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQ 890
HS ++H + ++DF +A+ + T + T+ Y APE +
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVTLWYRAPEILLG 177
Query: 891 GR-VSTRGDVYSYGIMLMET------FTGKKPTDEIF 920
+ ST D++S G + E F G D++F
Sbjct: 178 XKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 36.2 bits (82), Expect = 0.091, Method: Composition-based stats.
Identities = 50/217 (23%), Positives = 90/217 (41%), Gaps = 27/217 (12%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFH--QRYERALKSFQDECEVMKRIRHR 782
+ F K +G G++G VY AR + G VA+K E + E ++K + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 783 NLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFG 842
N+VK++ ++ L+ E++ + + + I L I + L+ L F
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPL-IKSYLFQLLQGLSFC 119
Query: 843 HSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQ 890
HS ++H + ++DF +A+ + T + T+ Y APE +
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVTLWYRAPEILLG 177
Query: 891 GR-VSTRGDVYSYGIMLMET------FTGKKPTDEIF 920
+ ST D++S G + E F G D++F
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 36.2 bits (82), Expect = 0.092, Method: Composition-based stats.
Identities = 50/219 (22%), Positives = 91/219 (41%), Gaps = 27/219 (12%)
Query: 724 ATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFH--QRYERALKSFQDECEVMKRIR 780
+ + F K +G G++G VY AR + G VA+K E + E ++K +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH 840
H N+VK++ ++ L+ E++ + + + I L I + L+ L
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPL-IKSYLFQLLQGLA 118
Query: 841 FGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYG 888
F HS ++H + ++DF +A+ + T + T+ Y APE
Sbjct: 119 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVTLWYRAPEIL 176
Query: 889 VQGR-VSTRGDVYSYGIMLMET------FTGKKPTDEIF 920
+ + ST D++S G + E F G D++F
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 215
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 36.2 bits (82), Expect = 0.093, Method: Composition-based stats.
Identities = 50/217 (23%), Positives = 90/217 (41%), Gaps = 27/217 (12%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFH--QRYERALKSFQDECEVMKRIRHR 782
+ F K +G G++G VY AR + G VA+K E + E ++K + H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 783 NLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFG 842
N+VK++ ++ L+ E++ + + + I L I + L+ L F
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPL-IKSYLFQLLQGLAFC 123
Query: 843 HSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQ 890
HS ++H + ++DF +A+ + T + T+ Y APE +
Sbjct: 124 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVTLWYRAPEILLG 181
Query: 891 GR-VSTRGDVYSYGIMLMET------FTGKKPTDEIF 920
+ ST D++S G + E F G D++F
Sbjct: 182 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 218
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 36.2 bits (82), Expect = 0.097, Method: Composition-based stats.
Identities = 50/217 (23%), Positives = 90/217 (41%), Gaps = 27/217 (12%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFH--QRYERALKSFQDECEVMKRIRHR 782
+ F K +G G++G VY AR + G VA+K E + E ++K + H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 783 NLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFG 842
N+VK++ ++ L+ E++ + + + I L I + L+ L F
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPL-IKSYLFQLLQGLAFC 126
Query: 843 HSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQ 890
HS ++H + ++DF +A+ + T + T+ Y APE +
Sbjct: 127 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVTLWYRAPEILLG 184
Query: 891 GR-VSTRGDVYSYGIMLMET------FTGKKPTDEIF 920
+ ST D++S G + E F G D++F
Sbjct: 185 XKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 221
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 36.2 bits (82), Expect = 0.10, Method: Composition-based stats.
Identities = 50/217 (23%), Positives = 90/217 (41%), Gaps = 27/217 (12%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFH--QRYERALKSFQDECEVMKRIRHR 782
+ F K +G G++G VY AR + G VA+K E + E ++K + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 783 NLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFG 842
N+VK++ ++ L+ E++ + + + I L I + L+ L F
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPL-IKSYLFQLLQGLAFC 119
Query: 843 HSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQ 890
HS ++H + ++DF +A+ + T + T+ Y APE +
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYTHEVVTLWYRAPEILLG 177
Query: 891 GR-VSTRGDVYSYGIMLMET------FTGKKPTDEIF 920
+ ST D++S G + E F G D++F
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 36.2 bits (82), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 87/203 (42%), Gaps = 27/203 (13%)
Query: 734 LGIGSFGSVYVA-RLQDGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIIS 789
LG GSFG V +A G +VA+K+ +++ + E ++ +RH +++K+
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 80
Query: 790 ACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIH 849
+ D +++EY N L + + M + R + A+EY H I+H
Sbjct: 81 VIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEAR-RFFQQIISAVEYC---HRHKIVH 135
Query: 850 ------------YMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVST-- 895
++ I+DF ++ + + L + + Y APE + G++
Sbjct: 136 RDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKT---SCGSPNYAAPEV-ISGKLYAGP 191
Query: 896 RGDVYSYGIMLMETFTGKKPTDE 918
DV+S G++L + P D+
Sbjct: 192 EVDVWSCGVILYVMLCRRLPFDD 214
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 36.2 bits (82), Expect = 0.11, Method: Composition-based stats.
Identities = 50/217 (23%), Positives = 90/217 (41%), Gaps = 27/217 (12%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFH--QRYERALKSFQDECEVMKRIRHR 782
+ F K +G G++G VY AR + G VA+K E + E ++K + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 783 NLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFG 842
N+VK++ ++ L+ E++ + + + I L I + L+ L F
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPL-IKSYLFQLLQGLAFC 119
Query: 843 HSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQ 890
HS ++H + ++DF +A+ + T + T+ Y APE +
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYTHEVVTLWYRAPEILLG 177
Query: 891 GR-VSTRGDVYSYGIMLMET------FTGKKPTDEIF 920
+ ST D++S G + E F G D++F
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 36.2 bits (82), Expect = 0.11, Method: Composition-based stats.
Identities = 50/217 (23%), Positives = 90/217 (41%), Gaps = 27/217 (12%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFH--QRYERALKSFQDECEVMKRIRHR 782
+ F K +G G++G VY AR + G VA+K E + E ++K + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 783 NLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFG 842
N+VK++ ++ L+ E++ + + + I L I + L+ L F
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPL-IKSYLFQLLQGLAFC 118
Query: 843 HSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQ 890
HS ++H + ++DF +A+ + T + T+ Y APE +
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYTHEVVTLWYRAPEILLG 176
Query: 891 GR-VSTRGDVYSYGIMLMET------FTGKKPTDEIF 920
+ ST D++S G + E F G D++F
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 213
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 36.2 bits (82), Expect = 0.11, Method: Composition-based stats.
Identities = 50/217 (23%), Positives = 90/217 (41%), Gaps = 27/217 (12%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFH--QRYERALKSFQDECEVMKRIRHR 782
+ F K +G G++G VY AR + G VA+K E + E ++K + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 783 NLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFG 842
N+VK++ ++ L+ E++ + + + I L I + L+ L F
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPL-IKSYLFQLLQGLAFC 118
Query: 843 HSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQ 890
HS ++H + ++DF +A+ + T + T+ Y APE +
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYTHEVVTLWYRAPEILLG 176
Query: 891 GR-VSTRGDVYSYGIMLMET------FTGKKPTDEIF 920
+ ST D++S G + E F G D++F
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 213
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 35.8 bits (81), Expect = 0.11, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 723 QATDRFSKNNLLGIGSFGSVYVA-RLQDGMEVAVKVFHQRYERALKS--FQD-------- 771
+ + ++S + LG G+FG V+ A + EV VK + E+ L+ +D
Sbjct: 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKK--EKVLEDCWIEDPKLGKVTL 78
Query: 772 ECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNG 807
E ++ R+ H N++K++ N F L+ME +G
Sbjct: 79 EIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSG 114
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 35.8 bits (81), Expect = 0.11, Method: Composition-based stats.
Identities = 50/217 (23%), Positives = 90/217 (41%), Gaps = 27/217 (12%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFH--QRYERALKSFQDECEVMKRIRHR 782
+ F K +G G++G VY AR + G VA+K E + E ++K + H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 783 NLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFG 842
N+VK++ ++ L+ E++ + + + I L I + L+ L F
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPL-IKSYLFQLLQGLAFC 126
Query: 843 HSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQ 890
HS ++H + ++DF +A+ + T + T+ Y APE +
Sbjct: 127 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVTLWYRAPEILLG 184
Query: 891 GR-VSTRGDVYSYGIMLMET------FTGKKPTDEIF 920
+ ST D++S G + E F G D++F
Sbjct: 185 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 221
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 89/213 (41%), Gaps = 30/213 (14%)
Query: 722 LQATDRFSKNNLLGIGSFGSVYVARLQDGM--EVAVKVFHQRYERALKSFQDECEVMKRI 779
+Q TD + +G+GS+ SV + E AVK+ +++ + +E E++ R
Sbjct: 18 IQFTDGYEVKEDIGVGSY-SVCKRCIHKATNXEFAVKII----DKSKRDPTEEIEILLRY 72
Query: 780 -RHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEY 838
+H N++ + + + ++ E G L +++ + + ++ + +EY
Sbjct: 73 GQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSE-REASAVLFTITKTVEY 131
Query: 839 LHFGHSTPIIHYMVA----------------HISDFSIAKFLNGQDQLSMQTQTLATIGY 882
LH + ++H + I DF AK L ++ L + T T +
Sbjct: 132 LH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGL-LXTPCY-TANF 186
Query: 883 MAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKP 915
+APE + D++S G++L TG P
Sbjct: 187 VAPEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 7/60 (11%)
Query: 84 IPPQLGNLSSLETLDLSHNKLSGNIPSSIFNMHTLKLLDFRDNQL------FGSLSSFIF 137
+P ++ NLS+L LDLSHN+L+ +P+ + + LK F DN + FG+L + F
Sbjct: 262 LPAEIKNLSNLRVLDLSHNRLTS-LPAELGSCFQLKYFYFFDNMVTTLPWEFGNLCNLQF 320
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 12/119 (10%)
Query: 462 LDKLILHGNKFSGAIPSCSGNLTSLRALYLGSNRFTSALPSTI---WNLKDILFFDVSSN 518
L +L L+GN + +P+ NL++LR L L NR TS LP+ + + LK FFD
Sbjct: 249 LTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTS-LPAELGSCFQLKYFYFFD---- 302
Query: 519 SLDGPLSLDIGNLKVVIELNLSRNNLSGDIPITIGGLKNLQKL--FLANNRLEGPIPES 575
++ L + GNL + L + N L + I K++ L +L +NR E P+P
Sbjct: 303 NMVTTLPWEFGNLCNLQFLGVEGNPLEKQF-LKILTEKSVTGLIFYLRDNRPEIPLPHE 360
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 51/104 (49%), Gaps = 9/104 (8%)
Query: 257 IFNMSTLKKLSLLENTLWGSLPSRIDLSLPNVEFLNLGTNRFSGNIPSSITNASKLTVFQ 316
IF L +L L N+L LP+ I +L N+ L+L NR + +P+ + + +L F
Sbjct: 243 IFKYDFLTRLYLNGNSL-TELPAEIK-NLSNLRVLDLSHNRLTS-LPAELGSCFQLKYFY 299
Query: 317 LRGNSFSGFIPNTIGNLRNLEFLNIADNYLTSSTPELSFLSSLT 360
N + +P GNL NL+FL + N L E FL LT
Sbjct: 300 FFDNMVTT-LPWEFGNLCNLQFLGVEGNPL-----EKQFLKILT 337
Score = 34.7 bits (78), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 58/135 (42%), Gaps = 29/135 (21%)
Query: 95 ETLDLSHNKLSGNIPSSIFNMHTLKLLDFRDNQLFGSLSSFIFNMSSMLGIDLSINRFSG 154
LDLS+ ++ NI ++IF L L N L L + I N+S++ +DLS NR +
Sbjct: 227 HALDLSNLQIF-NISANIFKYDFLTRLYLNGNSL-TELPAEIKNLSNLRVLDLSHNRLTS 284
Query: 155 ELPANICXXXXXXXXXXXGRNMFHGKIPSTLSKCKQLEGLYLRFNNLSGAIPKEIGNLTK 214
+P+ L C QL+ Y F+N+ +P E GNL
Sbjct: 285 --------------------------LPAELGSCFQLKYFYF-FDNMVTTLPWEFGNLCN 317
Query: 215 LKDIILNDNELRGEI 229
L+ + + N L +
Sbjct: 318 LQFLGVEGNPLEKQF 332
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 87/203 (42%), Gaps = 27/203 (13%)
Query: 734 LGIGSFGSVYVA-RLQDGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIIS 789
LG GSFG V +A G +VA+K+ +++ + E ++ +RH +++K+
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 81
Query: 790 ACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIH 849
+ D +++EY N L + + M + R + A+EY H I+H
Sbjct: 82 VIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEAR-RFFQQIISAVEYC---HRHKIVH 136
Query: 850 ------------YMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVST-- 895
++ I+DF ++ + + L + + Y APE + G++
Sbjct: 137 RDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKT---SCGSPNYAAPEV-ISGKLYAGP 192
Query: 896 RGDVYSYGIMLMETFTGKKPTDE 918
DV+S G++L + P D+
Sbjct: 193 EVDVWSCGVILYVMLCRRLPFDD 215
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 87/203 (42%), Gaps = 27/203 (13%)
Query: 734 LGIGSFGSVYVA-RLQDGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIIS 789
LG GSFG V +A G +VA+K+ +++ + E ++ +RH +++K+
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 75
Query: 790 ACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIH 849
+ D +++EY N L + + M + R + A+EY H I+H
Sbjct: 76 VIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEAR-RFFQQIISAVEYC---HRHKIVH 130
Query: 850 ------------YMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVST-- 895
++ I+DF ++ + + L + + Y APE + G++
Sbjct: 131 RDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKT---SCGSPNYAAPEV-ISGKLYAGP 186
Query: 896 RGDVYSYGIMLMETFTGKKPTDE 918
DV+S G++L + P D+
Sbjct: 187 EVDVWSCGVILYVMLCRRLPFDD 209
>pdb|2V9T|B Chain B, Complex Between The Second Lrr Domain Of Slit2 And The
First Ig Domain From Robo1
Length = 220
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%)
Query: 532 KVVIELNLSRNNLSGDIPITIGGLKNLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNK 591
+ + E+ L +N + P K L+++ L+NN++ P++F GL SL L L NK
Sbjct: 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91
Query: 592 IS 593
I+
Sbjct: 92 IT 93
>pdb|3V47|A Chain A, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
pdb|3V47|B Chain B, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
Length = 455
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 55/131 (41%)
Query: 467 LHGNKFSGAIPSCSGNLTSLRALYLGSNRFTSALPSTIWNLKDILFFDVSSNSLDGPLSL 526
L +K + S + T L L L N + W L +L ++S N L S
Sbjct: 282 LSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSR 341
Query: 527 DIGNLKVVIELNLSRNNLSGDIPITIGGLKNLQKLFLANNRLEGPIPESFSGLSSLEILD 586
NL + L+LS N++ + GL NL++L L N+L+ F L+SL+ +
Sbjct: 342 MFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIW 401
Query: 587 LSKNKISGVIP 597
L N P
Sbjct: 402 LHTNPWDCSCP 412
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 11/100 (11%)
Query: 200 NLSGAIPKEI-GNLTKLKDIILNDNELRGEIPQEMGNLPYLVRLTLATNNLVGVVPFTIF 258
N G+I + NL KL+ + L+ N +R Q LP L L L TN L VP IF
Sbjct: 333 NFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKS-VPDGIF 391
Query: 259 N-MSTLKKLSLLENTLWGSLPSRIDLSLPNVEFLNLGTNR 297
+ +++L+K+ L N W D S P +++L+ N+
Sbjct: 392 DRLTSLQKIWLHTNP-W-------DCSCPRIDYLSRWLNK 423
>pdb|3O6N|A Chain A, Crystal Structure Of Apl1 Leucine-Rich Repeat Domain
Length = 390
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 94/230 (40%), Gaps = 74/230 (32%)
Query: 432 FSRLLNLQGLGLAFNKLARSIPDEICH--------------LAKLDKLILHGNKFSGAIP 477
F+ +Q L + FN + R +P + L+ L + I H +
Sbjct: 89 FAYAHTIQKLYMGFNAI-RYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLS 147
Query: 478 SCSGNL-----------TSLRALYLGSNRFT----SALPSTI-----WNLKDILF----- 512
+ NL TSL+ L L SNR T S +PS +NL L
Sbjct: 148 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAV 207
Query: 513 --FDVSSNSLD---GPLSLDIGNLKV----------------VIELNLSRNNLSGDIPIT 551
D S NS++ GP+++++ LK+ ++E++LS N L +
Sbjct: 208 EELDASHNSINVVRGPVNVELTILKLQHNNLTDTAWLLNYPGLVEVDLSYNELEKIMYHP 267
Query: 552 IGGLKNLQKLFLANNRLEG------PIPESFSGLSSLEILDLSKNKISGV 595
++ L++L+++NNRL PIP +L++LDLS N + V
Sbjct: 268 FVKMQRLERLYISNNRLVALNLYGQPIP-------TLKVLDLSHNHLLHV 310
Score = 32.7 bits (73), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 11/134 (8%)
Query: 191 LEGLYLRFNNLSGAIPKEIGNLTKLKDIILNDNELRGEIPQEM-GNLPYLVRLTLATNNL 249
++ LY+ FN + P N+ L ++L N+L +P+ + N P L L+++ NNL
Sbjct: 95 IQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDL-SSLPRGIFHNTPKLTTLSMSNNNL 153
Query: 250 VGVVPFTIFNMSTLKKLSLLENTLWGSLPSRIDLSL-PNVEFLNLGTNRFSG-NIPSSIT 307
+ T ++L+ L L N L + +DLSL P++ N+ N S IP ++
Sbjct: 154 ERIEDDTFQATTSLQNLQLSSNRL-----THVDLSLIPSLFHANVSYNLLSTLAIPIAVE 208
Query: 308 --NASKLTVFQLRG 319
+AS ++ +RG
Sbjct: 209 ELDASHNSINVVRG 222
>pdb|2V9S|A Chain A, Second Lrr Domain Of Human Slit2
pdb|2V9S|B Chain B, Second Lrr Domain Of Human Slit2
pdb|2V9S|C Chain C, Second Lrr Domain Of Human Slit2
pdb|2V9S|D Chain D, Second Lrr Domain Of Human Slit2
Length = 220
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%)
Query: 532 KVVIELNLSRNNLSGDIPITIGGLKNLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNK 591
+ + E+ L +N + P K L+++ L+NN++ P++F GL SL L L NK
Sbjct: 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91
Query: 592 IS 593
I+
Sbjct: 92 IT 93
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 35.8 bits (81), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 87/203 (42%), Gaps = 27/203 (13%)
Query: 734 LGIGSFGSVYVA-RLQDGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIIS 789
LG GSFG V +A G +VA+K+ +++ + E ++ +RH +++K+
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 71
Query: 790 ACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIH 849
+ D +++EY N L + + M + R + A+EY H I+H
Sbjct: 72 VIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEAR-RFFQQIISAVEYC---HRHKIVH 126
Query: 850 ------------YMVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVST-- 895
++ I+DF ++ + + L + + Y APE + G++
Sbjct: 127 RDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKT---SCGSPNYAAPEV-ISGKLYAGP 182
Query: 896 RGDVYSYGIMLMETFTGKKPTDE 918
DV+S G++L + P D+
Sbjct: 183 EVDVWSCGVILYVMLCRRLPFDD 205
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 35.4 bits (80), Expect = 0.14, Method: Composition-based stats.
Identities = 51/219 (23%), Positives = 87/219 (39%), Gaps = 40/219 (18%)
Query: 727 RFSKNNL-LGIGSFGSVYVA-RLQDGMEVAVKVFHQR--YERALKSFQDECEVMKRIRHR 782
RF K ++ +G GSF +VY + +EVA R + + F++E E +K ++H
Sbjct: 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHP 85
Query: 783 NLVKII----SACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMI------DV 832
N+V+ S L+ E +G+L+ L F+ I + +
Sbjct: 86 NIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKR-------FKVXKIKVLRSWCRQI 138
Query: 833 ALALEYLHFGHSTPIIHYMV-------------AHISDFSIAKFLNGQDQLSMQTQTLAT 879
L++LH + PIIH + I D +A + S + T
Sbjct: 139 LKGLQFLH-TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL----KRASFAKAVIGT 193
Query: 880 IGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDE 918
+ APE + + DVY++G +E T + P E
Sbjct: 194 PEFXAPEX-YEEKYDESVDVYAFGXCXLEXATSEYPYSE 231
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 35.4 bits (80), Expect = 0.15, Method: Composition-based stats.
Identities = 50/226 (22%), Positives = 89/226 (39%), Gaps = 45/226 (19%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFH--QRYERALKSFQDECEVMKRIRHR 782
+ F K +G G++G VY AR + G VA+K E + E ++K + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 783 NLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALA------- 835
N+VK++ ++ L+ E++ L F + + + L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQD------------LKTFMDASALTGIPLPLIKSYLF 109
Query: 836 --LEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIG 881
L+ L F HS ++H + ++DF +A+ + T + T+
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVTLW 167
Query: 882 YMAPEYGVQGR-VSTRGDVYSYGIMLMET------FTGKKPTDEIF 920
Y APE + + ST D++S G + E F G D++F
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 213
>pdb|2V70|A Chain A, Third Lrr Domain Of Human Slit2
pdb|2V70|B Chain B, Third Lrr Domain Of Human Slit2
pdb|2V70|C Chain C, Third Lrr Domain Of Human Slit2
pdb|2V70|D Chain D, Third Lrr Domain Of Human Slit2
Length = 220
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 534 VIELNLSRNNLSGDIPITIGGLKNLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNKIS 593
V E+ L+ N L GL++L+ L L +NR+ +SF GLSS+ +L L N+I+
Sbjct: 83 VNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQIT 142
Query: 594 GVIP 597
V P
Sbjct: 143 TVAP 146
>pdb|2FT3|A Chain A, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|B Chain B, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|C Chain C, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|D Chain D, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|E Chain E, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|F Chain F, Crystal Structure Of The Biglycan Dimer Core Protein
Length = 332
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 119/333 (35%), Gaps = 52/333 (15%)
Query: 204 AIPKEIGNLTKLKDIILND-NELRGEIPQEMGNLPYLVRLTLATNNLVGVVPFTIFNMST 262
A+PKEI T L D+ ND +ELR + + L +L L L N + + +
Sbjct: 47 AVPKEISPDTTLLDLQNNDISELRKD---DFKGLQHLYALVLVNNKISKIHEKAFSPLRK 103
Query: 263 LKKLSLLENTLWGSLPSRIDLSLPNVEFLNLGTNRFSGNIPSSITNASKLTVFQLRGNSF 322
L+KL + +N L P N+PSS L ++ N
Sbjct: 104 LQKLYISKNHLVEIPP----------------------NLPSS------LVELRIHDNRI 135
Query: 323 SGFIPNTIGNLRNLEFLNIADNYLTSSTPELSFLSSLT-NCQKIRVLILAGNPLDGILPS 381
LRN+ + + N L +S E L N +I L G P D LP
Sbjct: 136 RKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIPKD--LPE 193
Query: 382 SIGNLSISLERFQMFNCRISGKIPQVISXXXXXXXXXXXXXXXXXSIPVTFSRLLNLQGL 441
++ L + + Q + ++ +P L+ L
Sbjct: 194 TLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPT-------LREL 246
Query: 442 GLAFNKLARSIPDEICHLAKLDKLILHGNKFS--GAIPSCSGNLTSLRALYLGSNRFTSA 499
L NKL+R +P + L L + LH N + G C RA Y G + F +
Sbjct: 247 HLDNNKLSR-VPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNP 305
Query: 500 LPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLK 532
+P W ++ F V+ L++ GN K
Sbjct: 306 VP--YWEVQPATFRCVTDR-----LAIQFGNYK 331
Score = 30.8 bits (68), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 537 LNLSRNNLSGDIPITIGGLKNLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNKISGVI 596
L+L N++S GL++L L L NN++ ++FS L L+ L +SKN + +
Sbjct: 59 LDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIP 118
Query: 597 P 597
P
Sbjct: 119 P 119
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 9/164 (5%)
Query: 441 LGLAFNKLARSIP----DEICHLAKLDKLILHGNKFSGAIPSCSGNLTSLRALYLGSNRF 496
L L NKL +S+P D++ L KL L +G F G TSL+ L L N
Sbjct: 33 LELESNKL-QSLPHGVFDKLTQLTKL-SLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGV 90
Query: 497 TSALPSTIWNLKDILFFDVSSNSLDGPLSLDIG-NLKVVIELNLSRNNLSGDIPITIGGL 555
+ + S L+ + D ++L + +L+ +I L++S + GL
Sbjct: 91 IT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGL 149
Query: 556 KNLQKLFLANNRL-EGPIPESFSGLSSLEILDLSKNKISGVIPT 598
+L+ L +A N E +P+ F+ L +L LDLS+ ++ + PT
Sbjct: 150 SSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPT 193
Score = 35.0 bits (79), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 71/174 (40%), Gaps = 10/174 (5%)
Query: 181 IPSTLSKCKQLEGLYLRFNNLSGAIPKEIGNLTKLKDIILNDNEL--RGEIPQEMGNLPY 238
IPS+ ++ L L N L LT+L + L+ N L +G Q
Sbjct: 26 IPSSATR------LELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTS 79
Query: 239 LVRLTLATNNLVGVVPFTIFNMSTLKKLSLLENTLWGSLPSRIDLSLPNVEFLNLGTNRF 298
L L L+ N ++ + + L+ L + L + LSL N+ +L++
Sbjct: 80 LKYLDLSFNGVITMSS-NFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHT 138
Query: 299 SGNIPSSITNASKLTVFQLRGNSF-SGFIPNTIGNLRNLEFLNIADNYLTSSTP 351
S L V ++ GNSF F+P+ LRNL FL+++ L +P
Sbjct: 139 RVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSP 192
Score = 30.4 bits (67), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 2/113 (1%)
Query: 483 LTSLRALYLGSNRFTSA-LPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSR 541
L+SL L + N F LP L+++ F D+S L+ +L + LN+S
Sbjct: 149 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSH 208
Query: 542 NNLSGDIPITIGGLKNLQKLFLANNRLEGPIPESFSGL-SSLEILDLSKNKIS 593
NN L +LQ L + N + + SSL L+L++N +
Sbjct: 209 NNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 261
>pdb|3T6Q|A Chain A, Crystal Structure Of Mouse Rp105MD-1 Complex
pdb|3T6Q|B Chain B, Crystal Structure Of Mouse Rp105MD-1 Complex
Length = 606
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 72/162 (44%), Gaps = 5/162 (3%)
Query: 431 TFSRLLNLQGLGLAFNKLARSIPDEICHLAKLDKLILHGNKFSGAIPSCSGNLTSLRALY 490
TF LQ L L L+ +P + L+ L KL+L NKF + N SL L
Sbjct: 273 TFHCFSGLQELDLTATHLSE-LPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLS 331
Query: 491 LGSNRFTSALPS-TIWNLKDILFFDVSSNSLDGP--LSLDIGNLKVVIELNLSRNNLSGD 547
+ N L + + NL+++ D+S + ++ +L + NL + LNLS N
Sbjct: 332 IKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSL 391
Query: 548 IPITIGGLKNLQKLFLANNRLEGPIPES-FSGLSSLEILDLS 588
L+ L LA RL+ +S F L L++L+LS
Sbjct: 392 KTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLS 433
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 35.0 bits (79), Expect = 0.22, Method: Composition-based stats.
Identities = 50/221 (22%), Positives = 91/221 (41%), Gaps = 27/221 (12%)
Query: 722 LQATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFH--QRYERALKSFQDECEVMKR 778
L + + F K +G G++G VY AR + G VA+K E + E ++K
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 779 IRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEY 838
+ H N+VK++ ++ L+ E++ + + + I L I + L+
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPL-IKSYLFQLLQG 118
Query: 839 LHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPE 886
L F HS ++H + ++DF +A+ + + T+ Y APE
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPE 176
Query: 887 YGVQGR-VSTRGDVYSYGIMLMET------FTGKKPTDEIF 920
+ + ST D++S G + E F G D++F
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 217
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 35.0 bits (79), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 88/226 (38%), Gaps = 45/226 (19%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFH--QRYERALKSFQDECEVMKRIRHR 782
+ F K +G G++G VY AR + G VA+K E + E ++K + H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 783 NLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALA------- 835
N+VK++ ++ L+ E++ L F + + + L
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLHQD------------LKTFMDASALTGIPLPLIKSYLF 113
Query: 836 --LEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIG 881
L+ L F HS ++H + ++DF +A+ + + T+
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYXHEVVTLW 171
Query: 882 YMAPEYGVQGR-VSTRGDVYSYGIMLMET------FTGKKPTDEIF 920
Y APE + + ST D++S G + E F G D++F
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 217
>pdb|1SQ0|B Chain B, Crystal Structure Of The Complex Of The Wild-Type Von
Willebrand Factor A1 Domain And Glycoprotein Ib Alpha At
2.6 Angstrom Resolution
Length = 288
Score = 35.0 bits (79), Expect = 0.23, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 41/81 (50%)
Query: 194 LYLRFNNLSGAIPKEIGNLTKLKDIILNDNELRGEIPQEMGNLPYLVRLTLATNNLVGVV 253
L + FN L+ + L +L+++ L NEL+ P + P L +L+LA N+L +
Sbjct: 105 LDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNDLTELP 164
Query: 254 PFTIFNMSTLKKLSLLENTLW 274
+ + L L L EN+L+
Sbjct: 165 AGLLNGLENLDTLLLQENSLY 185
Score = 33.9 bits (76), Expect = 0.53, Method: Composition-based stats.
Identities = 39/115 (33%), Positives = 51/115 (44%), Gaps = 7/115 (6%)
Query: 481 GNLTSLRALYLGSNRFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELN-- 538
G L L L L N+ S LP L + DVS N L SL +G L+ + EL
Sbjct: 74 GTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLT---SLPLGALRGLGELQEL 129
Query: 539 -LSRNNLSGDIPITIGGLKNLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNKI 592
L N L P + L+KL LANN L +GL +L+ L L +N +
Sbjct: 130 YLKGNELKTLPPGLLTPTPKLEKLSLANNDLTELPAGLLNGLENLDTLLLQENSL 184
Score = 33.1 bits (74), Expect = 0.85, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 60/147 (40%), Gaps = 20/147 (13%)
Query: 244 LATNNLVGVVPFTIFNMSTLKKLSLLENTLWGSLP--SRIDLS-------------LPNV 288
L T +L ++P+T L + L + + G+LP +DLS LP +
Sbjct: 43 LYTFSLATLMPYTRLTQLNLDRCELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPAL 102
Query: 289 EFLNLGTNRFSGNIPSSITNASKLTVFQLRGNSFSGFIPNTIGNLRNLEFLNIADNYLTS 348
L++ NR + ++ +L L+GN P + LE L++A+N LT
Sbjct: 103 TVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNDLTE 162
Query: 349 STPELSFLSSLTNCQKIRVLILAGNPL 375
L L + + L+L N L
Sbjct: 163 LPAGL-----LNGLENLDTLLLQENSL 184
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 35.0 bits (79), Expect = 0.24, Method: Composition-based stats.
Identities = 50/221 (22%), Positives = 91/221 (41%), Gaps = 27/221 (12%)
Query: 722 LQATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFH--QRYERALKSFQDECEVMKR 778
L + + F K +G G++G VY AR + G VA+K E + E ++K
Sbjct: 3 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 62
Query: 779 IRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEY 838
+ H N+VK++ ++ L+ E++ + + + I L I + L+
Sbjct: 63 LNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPL-IKSYLFQLLQG 119
Query: 839 LHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPE 886
L F HS ++H + ++DF +A+ + + T+ Y APE
Sbjct: 120 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPE 177
Query: 887 YGVQGR-VSTRGDVYSYGIMLMET------FTGKKPTDEIF 920
+ + ST D++S G + E F G D++F
Sbjct: 178 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 218
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 15/95 (15%)
Query: 723 QATDRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQ--RYE-RALKSFQDECEVMKR 778
+ DRF + G G+FG+V + + + GM VA+K Q R+ R L+ QD +
Sbjct: 20 KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQD----LAV 75
Query: 779 IRHRNLVKIISAC-------SNDDFKALIMEYMPN 806
+ H N+V++ S D + ++MEY+P+
Sbjct: 76 LHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD 110
>pdb|1M10|B Chain B, Crystal Structure Of The Complex Of Glycoprotein Ib Alpha
And The Von Willebrand Factor A1 Domain
Length = 290
Score = 34.7 bits (78), Expect = 0.26, Method: Composition-based stats.
Identities = 39/115 (33%), Positives = 52/115 (45%), Gaps = 7/115 (6%)
Query: 481 GNLTSLRALYLGSNRFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELN-- 538
G L L L L N+ S LP L + DVS N L SL +G L+ + EL
Sbjct: 74 GTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLT---SLPLGALRGLGELQEL 129
Query: 539 -LSRNNLSGDIPITIGGLKNLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNKI 592
L N L P + L+KL LANN+L +GL +L+ L L +N +
Sbjct: 130 YLKGNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLLQENSL 184
Score = 34.3 bits (77), Expect = 0.32, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 40/81 (49%)
Query: 194 LYLRFNNLSGAIPKEIGNLTKLKDIILNDNELRGEIPQEMGNLPYLVRLTLATNNLVGVV 253
L + FN L+ + L +L+++ L NEL+ P + P L +L+LA N L +
Sbjct: 105 LDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLTELP 164
Query: 254 PFTIFNMSTLKKLSLLENTLW 274
+ + L L L EN+L+
Sbjct: 165 AGLLNGLENLDTLLLQENSLY 185
Score = 33.9 bits (76), Expect = 0.52, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 60/147 (40%), Gaps = 20/147 (13%)
Query: 244 LATNNLVGVVPFTIFNMSTLKKLSLLENTLWGSLP--SRIDLS-------------LPNV 288
L T +L ++P+T L + L + + G+LP +DLS LP +
Sbjct: 43 LYTFSLATLMPYTRLTQLNLDRCELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPAL 102
Query: 289 EFLNLGTNRFSGNIPSSITNASKLTVFQLRGNSFSGFIPNTIGNLRNLEFLNIADNYLTS 348
L++ NR + ++ +L L+GN P + LE L++A+N LT
Sbjct: 103 TVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLTE 162
Query: 349 STPELSFLSSLTNCQKIRVLILAGNPL 375
L L + + L+L N L
Sbjct: 163 LPAGL-----LNGLENLDTLLLQENSL 184
>pdb|1M0Z|A Chain A, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
pdb|1M0Z|B Chain B, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
Length = 290
Score = 34.7 bits (78), Expect = 0.26, Method: Composition-based stats.
Identities = 39/115 (33%), Positives = 52/115 (45%), Gaps = 7/115 (6%)
Query: 481 GNLTSLRALYLGSNRFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELN-- 538
G L L L L N+ S LP L + DVS N L SL +G L+ + EL
Sbjct: 74 GTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLT---SLPLGALRGLGELQEL 129
Query: 539 -LSRNNLSGDIPITIGGLKNLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNKI 592
L N L P + L+KL LANN+L +GL +L+ L L +N +
Sbjct: 130 YLKGNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLLQENSL 184
Score = 34.3 bits (77), Expect = 0.33, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 40/81 (49%)
Query: 194 LYLRFNNLSGAIPKEIGNLTKLKDIILNDNELRGEIPQEMGNLPYLVRLTLATNNLVGVV 253
L + FN L+ + L +L+++ L NEL+ P + P L +L+LA N L +
Sbjct: 105 LDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLTELP 164
Query: 254 PFTIFNMSTLKKLSLLENTLW 274
+ + L L L EN+L+
Sbjct: 165 AGLLNGLENLDTLLLQENSLY 185
Score = 33.5 bits (75), Expect = 0.55, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 60/147 (40%), Gaps = 20/147 (13%)
Query: 244 LATNNLVGVVPFTIFNMSTLKKLSLLENTLWGSLP--SRIDLS-------------LPNV 288
L T +L ++P+T L + L + + G+LP +DLS LP +
Sbjct: 43 LYTFSLATLMPYTRLTQLNLDRCELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPAL 102
Query: 289 EFLNLGTNRFSGNIPSSITNASKLTVFQLRGNSFSGFIPNTIGNLRNLEFLNIADNYLTS 348
L++ NR + ++ +L L+GN P + LE L++A+N LT
Sbjct: 103 TVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLTE 162
Query: 349 STPELSFLSSLTNCQKIRVLILAGNPL 375
L L + + L+L N L
Sbjct: 163 LPAGL-----LNGLENLDTLLLQENSL 184
>pdb|3OJA|B Chain B, Crystal Structure Of Lrim1APL1C COMPLEX
Length = 597
Score = 34.7 bits (78), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 94/230 (40%), Gaps = 74/230 (32%)
Query: 432 FSRLLNLQGLGLAFNKLARSIPDEICH--------------LAKLDKLILHGNKFSGAIP 477
F+ +Q L + FN + R +P + L+ L + I H +
Sbjct: 95 FAYAHTIQKLYMGFNAI-RYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLS 153
Query: 478 SCSGNL-----------TSLRALYLGSNRFT----SALPSTI-----WNLKDILF----- 512
+ NL TSL+ L L SNR T S +PS +NL L
Sbjct: 154 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAV 213
Query: 513 --FDVSSNSLD---GPLSLDIGNLKV----------------VIELNLSRNNLSGDIPIT 551
D S NS++ GP+++++ LK+ ++E++LS N L +
Sbjct: 214 EELDASHNSINVVRGPVNVELTILKLQHNNLTDTAWLLNYPGLVEVDLSYNELEKIMYHP 273
Query: 552 IGGLKNLQKLFLANNRLEG------PIPESFSGLSSLEILDLSKNKISGV 595
++ L++L+++NNRL PIP +L++LDLS N + V
Sbjct: 274 FVKMQRLERLYISNNRLVALNLYGQPIP-------TLKVLDLSHNHLLHV 316
Score = 32.3 bits (72), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 11/134 (8%)
Query: 191 LEGLYLRFNNLSGAIPKEIGNLTKLKDIILNDNELRGEIPQEM-GNLPYLVRLTLATNNL 249
++ LY+ FN + P N+ L ++L N+L +P+ + N P L L+++ NNL
Sbjct: 101 IQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDL-SSLPRGIFHNTPKLTTLSMSNNNL 159
Query: 250 VGVVPFTIFNMSTLKKLSLLENTLWGSLPSRIDLSL-PNVEFLNLGTNRFSG-NIPSSIT 307
+ T ++L+ L L N L + +DLSL P++ N+ N S IP ++
Sbjct: 160 ERIEDDTFQATTSLQNLQLSSNRL-----THVDLSLIPSLFHANVSYNLLSTLAIPIAVE 214
Query: 308 --NASKLTVFQLRG 319
+AS ++ +RG
Sbjct: 215 ELDASHNSINVVRG 228
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 34.7 bits (78), Expect = 0.27, Method: Composition-based stats.
Identities = 49/218 (22%), Positives = 90/218 (41%), Gaps = 29/218 (13%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQD----ECEVMKRIRH 781
+ F K +G G++G VY AR + EV V + R + + E ++K + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEV-VALXKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHF 841
N+VK++ ++ L+ E++ + + + I L I + L+ L F
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPL-IKSYLFQLLQGLAF 118
Query: 842 GHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGV 889
HS ++H + ++DF +A+ + T + T+ Y APE +
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVTLWYRAPEILL 176
Query: 890 QGR-VSTRGDVYSYGIMLMET------FTGKKPTDEIF 920
+ ST D++S G + E F G D++F
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 34.7 bits (78), Expect = 0.27, Method: Composition-based stats.
Identities = 49/218 (22%), Positives = 90/218 (41%), Gaps = 29/218 (13%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQD----ECEVMKRIRH 781
+ F K +G G++G VY AR + EV V + R + + E ++K + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEV-VALXKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHF 841
N+VK++ ++ L+ E++ + + + I L I + L+ L F
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPL-IKSYLFQLLQGLAF 117
Query: 842 GHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGV 889
HS ++H + ++DF +A+ + T + T+ Y APE +
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVTLWYRAPEILL 175
Query: 890 QGR-VSTRGDVYSYGIMLMET------FTGKKPTDEIF 920
+ ST D++S G + E F G D++F
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 213
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 34.7 bits (78), Expect = 0.28, Method: Composition-based stats.
Identities = 50/217 (23%), Positives = 84/217 (38%), Gaps = 52/217 (23%)
Query: 728 FSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVK 786
F + L+G G FG V+ A+ + DG +K E+A + E + + ++ H N+V
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKA----EREVKALAKLDHVNIVH 68
Query: 787 IISACSNDDF--------------KALI--MEYMPNGSLENRLYSGTCMLDIFQRLNIMI 830
D+ K L ME+ G+LE I +R +
Sbjct: 69 YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQW---------IEKRRGEKL 119
Query: 831 DVALALEYLH-------FGHSTPIIH--------YMV----AHISDFSIAKFLNGQDQLS 871
D LALE + HS +I+ ++V I DF + L +
Sbjct: 120 DKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK-- 177
Query: 872 MQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLME 908
+ ++ T+ YM+PE D+Y+ G++L E
Sbjct: 178 -RXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAE 213
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 34.7 bits (78), Expect = 0.30, Method: Composition-based stats.
Identities = 45/213 (21%), Positives = 86/213 (40%), Gaps = 34/213 (15%)
Query: 734 LGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALK------SFQDECEVMKRIRHRNLVK 786
LG G F V R + G+E A K +R RA + + E +++++ H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 787 IISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTP 846
+ N LI+E + G L + L + + + + + + + YL H+
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSE-EEATSFIKQILDGVNYL---HTKK 135
Query: 847 IIHY--------------MVAHIS--DFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQ 890
I H+ + HI DF +A + +D + + T ++APE
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGVEFK-NIFGTPEFVAPEIVNY 192
Query: 891 GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGE 923
+ D++S G++ +G P F+G+
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASP----FLGD 221
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 34.7 bits (78), Expect = 0.30, Method: Composition-based stats.
Identities = 45/213 (21%), Positives = 86/213 (40%), Gaps = 34/213 (15%)
Query: 734 LGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALK------SFQDECEVMKRIRHRNLVK 786
LG G F V R + G+E A K +R RA + + E +++++ H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 787 IISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTP 846
+ N LI+E + G L + L + + + + + + + YL H+
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSE-EEATSFIKQILDGVNYL---HTKK 135
Query: 847 IIHY--------------MVAHIS--DFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQ 890
I H+ + HI DF +A + +D + + T ++APE
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGVEFK-NIFGTPEFVAPEIVNY 192
Query: 891 GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGE 923
+ D++S G++ +G P F+G+
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASP----FLGD 221
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 34.7 bits (78), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 89/217 (41%), Gaps = 27/217 (12%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFH--QRYERALKSFQDECEVMKRIRHR 782
+ F K +G G++G VY AR + G VA+K E + E ++K + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 783 NLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFG 842
N+VK++ ++ L+ E++ + + + I L I + L+ L F
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPL-IKSYLFQLLQGLAFC 119
Query: 843 HSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQ 890
HS ++H + ++DF +A+ + + T+ Y APE +
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYXHEVVTLWYRAPEILLG 177
Query: 891 GR-VSTRGDVYSYGIMLMET------FTGKKPTDEIF 920
+ ST D++S G + E F G D++F
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 34.7 bits (78), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 852 VAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT 911
V I DF +A+ + + + +MAPE + + DV+S+G++L E F+
Sbjct: 231 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
Query: 912 -GKKPTDEIFIGE 923
G P + I E
Sbjct: 291 LGASPYPGVKIDE 303
>pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain
pdb|3CIY|A Chain A, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
pdb|3CIY|B Chain B, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
Length = 697
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 71/163 (43%), Gaps = 2/163 (1%)
Query: 437 NLQGLGLAFNKLARSIPDEICHLAKLDKLILHGNKFSGAIPSCSGNLTSLRALYLGSNRF 496
N+ L L N+L R P ++L L N S P L L+ L L N
Sbjct: 26 NITVLNLTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEPELCQILPLLKVLNLQHNEL 85
Query: 497 TSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRNNLSGDIPITIGGLK 556
+ T ++ D+ SNS+ S N K +I+L+LS N LS T L+
Sbjct: 86 SQISDQTFVFCTNLTELDLMSNSIHKIKSNPFKNQKNLIKLDLSHNGLSSTKLGTGVQLE 145
Query: 557 NLQKLFLANNRLEGPIPE--SFSGLSSLEILDLSKNKISGVIP 597
NLQ+L LA N++ E F G SSL LDLS N + P
Sbjct: 146 NLQELLLAKNKILALRSEELEFLGNSSLRKLDLSSNPLKEFSP 188
Score = 29.6 bits (65), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 71/173 (41%), Gaps = 13/173 (7%)
Query: 431 TFSRLLNLQGLGLA--FNKLARSIPDEICHLAK--LDKLILHGNKFSGAIPSCSGNLTSL 486
TF+ L++L+ L L+ F L + LA L L L N S L L
Sbjct: 348 TFTGLVSLKYLSLSKTFTSLQTLTNETFVSLAHSPLLTLNLTKNHISKIANGTFSWLGQL 407
Query: 487 RALYLGSNRFTSALPSTIWN-LKDILFFDVSSNSLDGPLSLDIGNLKVVIELN---LSRN 542
R L LG N L W L++I +S N L L + +V L L R
Sbjct: 408 RILDLGLNEIEQKLSGQEWRGLRNIFEIYLSYNKY---LQLSTSSFALVPSLQRLMLRRV 464
Query: 543 NLSG-DI-PITIGGLKNLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNKIS 593
L DI P L+NL L L+NN + + GL +LEILD N ++
Sbjct: 465 ALKNVDISPSPFRPLRNLTILDLSNNNIANINEDLLEGLENLEILDFQHNNLA 517
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 34.3 bits (77), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 852 VAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT 911
V I DF +A+ + + + +MAPE + + DV+S+G++L E F+
Sbjct: 236 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
Query: 912 -GKKPTDEIFIGE 923
G P + I E
Sbjct: 296 LGASPYPGVKIDE 308
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 34.3 bits (77), Expect = 0.33, Method: Composition-based stats.
Identities = 45/213 (21%), Positives = 86/213 (40%), Gaps = 34/213 (15%)
Query: 734 LGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALK------SFQDECEVMKRIRHRNLVK 786
LG G F V R + G+E A K +R RA + + E +++++ H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 787 IISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTP 846
+ N LI+E + G L + L + + + + + + + YL H+
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSE-EEATSFIKQILDGVNYL---HTKK 135
Query: 847 IIHY--------------MVAHIS--DFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQ 890
I H+ + HI DF +A + +D + + T ++APE
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGVEFK-NIFGTPEFVAPEIVNY 192
Query: 891 GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGE 923
+ D++S G++ +G P F+G+
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASP----FLGD 221
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 34.3 bits (77), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 852 VAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT 911
V I DF +A+ + + + +MAPE + + DV+S+G++L E F+
Sbjct: 229 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
Query: 912 -GKKPTDEIFIGE 923
G P + I E
Sbjct: 289 LGASPYPGVKIDE 301
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 34.3 bits (77), Expect = 0.33, Method: Composition-based stats.
Identities = 46/219 (21%), Positives = 87/219 (39%), Gaps = 41/219 (18%)
Query: 728 FSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFH-QRYERALKSFQDECEVMKRIRHRNLV 785
F LG G FG V+ A+ + D A+K E A + E + + ++ H +V
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 66
Query: 786 KIISACSNDDFKALIMEYMPNGSLENRL-----------YSGTCMLDIFQR---LNIMID 831
+ +A + + P L ++ +G C ++ +R L+I +
Sbjct: 67 RYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQ 126
Query: 832 VALALEYLHFGHSTPIIHYM------------VAHISDFSIAKFLNGQDQ---------- 869
+A A+E+LH S ++H V + DF + ++ ++
Sbjct: 127 IAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 183
Query: 870 LSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLME 908
+ T + T YM+PE S + D++S G++L E
Sbjct: 184 YARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFE 222
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 34.3 bits (77), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 81/212 (38%), Gaps = 26/212 (12%)
Query: 721 LLQATDRFSKNNLLGIGSFG-SVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRI 779
Q D K+ LG GSF + AVK+ +R E + Q E +K
Sbjct: 6 FYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRME---ANTQKEITALKLC 62
Query: 780 R-HRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEY 838
H N+VK+ + L+ME + G L R+ + + IM + A+ +
Sbjct: 63 EGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSET-EASYIMRKLVSAVSH 121
Query: 839 LHFGHSTPIIHY---------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYM 883
+ H ++H + I DF A+ L D ++T T+ Y
Sbjct: 122 M---HDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFAR-LKPPDNQPLKTPCF-TLHYA 176
Query: 884 APEYGVQGRVSTRGDVYSYGIMLMETFTGKKP 915
APE Q D++S G++L +G+ P
Sbjct: 177 APELLNQNGYDESCDLWSLGVILYTMLSGQVP 208
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 34.3 bits (77), Expect = 0.34, Method: Composition-based stats.
Identities = 45/213 (21%), Positives = 86/213 (40%), Gaps = 34/213 (15%)
Query: 734 LGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALK------SFQDECEVMKRIRHRNLVK 786
LG G F V R + G+E A K +R RA + + E +++++ H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 787 IISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTP 846
+ N LI+E + G L + L + + + + + + + YL H+
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSE-EEATSFIKQILDGVNYL---HTKK 135
Query: 847 IIHY--------------MVAHIS--DFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQ 890
I H+ + HI DF +A + +D + + T ++APE
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGVEFK-NIFGTPEFVAPEIVNY 192
Query: 891 GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGE 923
+ D++S G++ +G P F+G+
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASP----FLGD 221
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 34.3 bits (77), Expect = 0.34, Method: Composition-based stats.
Identities = 45/213 (21%), Positives = 86/213 (40%), Gaps = 34/213 (15%)
Query: 734 LGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALK------SFQDECEVMKRIRHRNLVK 786
LG G F V R + G+E A K +R RA + + E +++++ H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 787 IISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTP 846
+ N LI+E + G L + L + + + + + + + YL H+
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSE-EEATSFIKQILDGVNYL---HTKK 135
Query: 847 IIHY--------------MVAHIS--DFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQ 890
I H+ + HI DF +A + +D + + T ++APE
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGVEFK-NIFGTPEFVAPEIVNY 192
Query: 891 GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGE 923
+ D++S G++ +G P F+G+
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASP----FLGD 221
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 34.3 bits (77), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 852 VAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT 911
V I DF +A+ + + + +MAPE + + DV+S+G++L E F+
Sbjct: 238 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
Query: 912 -GKKPTDEIFIGE 923
G P + I E
Sbjct: 298 LGASPYPGVKIDE 310
>pdb|3RG1|A Chain A, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|E Chain E, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|I Chain I, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|M Chain M, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|B Chain B, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|F Chain F, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|J Chain J, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|N Chain N, Crystal Structure Of The Rp105MD-1 Complex
Length = 612
Score = 34.3 bits (77), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 69/162 (42%), Gaps = 5/162 (3%)
Query: 431 TFSRLLNLQGLGLAFNKLARSIPDEICHLAKLDKLILHGNKFSGAIPSCSGNLTSLRALY 490
TF +Q L L L +P I + L KL+L+ N F + + SLR LY
Sbjct: 272 TFRCFTRVQELDLTAAHL-NGLPSGIEGMNSLKKLVLNANSFDQLCQINAASFPSLRDLY 330
Query: 491 LGSN-RFTSALPSTIWNLKDILFFDVSSNSLDGP--LSLDIGNLKVVIELNLSRNNLSGD 547
+ N R + L+++ D+S + ++ +L + NL+ + LNLS N G
Sbjct: 331 IKGNMRKLDLGTRCLEKLENLQKLDLSHSDIEASDCCNLQLKNLRHLQYLNLSYNEPLGL 390
Query: 548 IPITIGGLKNLQKLFLANNRLEGPIPES-FSGLSSLEILDLS 588
L+ L +A L P S F L L +L+LS
Sbjct: 391 EDQAFKECPQLELLDVAFTHLHVKAPHSPFQNLHLLRVLNLS 432
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 34.3 bits (77), Expect = 0.38, Method: Composition-based stats.
Identities = 49/219 (22%), Positives = 90/219 (41%), Gaps = 27/219 (12%)
Query: 724 ATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFH--QRYERALKSFQDECEVMKRIR 780
+ + F K +G G++G VY AR + G VA+K E + E ++K +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH 840
H N+VK++ ++ L+ E++ + + + I L I + L+ L
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPL-IKSYLFQLLQGLA 118
Query: 841 FGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYG 888
F HS ++H + ++DF +A+ + + T+ Y APE
Sbjct: 119 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGV--PVRTYXHEVVTLWYRAPEIL 176
Query: 889 VQGR-VSTRGDVYSYGIMLMET------FTGKKPTDEIF 920
+ + ST D++S G + E F G D++F
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 215
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 34.3 bits (77), Expect = 0.40, Method: Composition-based stats.
Identities = 49/219 (22%), Positives = 90/219 (41%), Gaps = 27/219 (12%)
Query: 724 ATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFH--QRYERALKSFQDECEVMKRIR 780
+ + F K +G G++G VY AR + G VA+K E + E ++K +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH 840
H N+VK++ ++ L+ E++ + + + I L I + L+ L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPL-IKSYLFQLLQGLA 117
Query: 841 FGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYG 888
F HS ++H + ++DF +A+ + + T+ Y APE
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEIL 175
Query: 889 VQGR-VSTRGDVYSYGIMLMET------FTGKKPTDEIF 920
+ + ST D++S G + E F G D++F
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 34.3 bits (77), Expect = 0.40, Method: Composition-based stats.
Identities = 49/219 (22%), Positives = 90/219 (41%), Gaps = 27/219 (12%)
Query: 724 ATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFH--QRYERALKSFQDECEVMKRIR 780
+ + F K +G G++G VY AR + G VA+K E + E ++K +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH 840
H N+VK++ ++ L+ E++ + + + I L I + L+ L
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPL-IKSYLFQLLQGLA 119
Query: 841 FGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYG 888
F HS ++H + ++DF +A+ + + T+ Y APE
Sbjct: 120 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEIL 177
Query: 889 VQGR-VSTRGDVYSYGIMLMET------FTGKKPTDEIF 920
+ + ST D++S G + E F G D++F
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 216
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 34.3 bits (77), Expect = 0.40, Method: Composition-based stats.
Identities = 49/219 (22%), Positives = 90/219 (41%), Gaps = 27/219 (12%)
Query: 724 ATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFH--QRYERALKSFQDECEVMKRIR 780
+ + F K +G G++G VY AR + G VA+K E + E ++K +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH 840
H N+VK++ ++ L+ E++ + + + I L I + L+ L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPL-IKSYLFQLLQGLA 120
Query: 841 FGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYG 888
F HS ++H + ++DF +A+ + + T+ Y APE
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEIL 178
Query: 889 VQGR-VSTRGDVYSYGIMLMET------FTGKKPTDEIF 920
+ + ST D++S G + E F G D++F
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 217
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 34.3 bits (77), Expect = 0.40, Method: Composition-based stats.
Identities = 49/219 (22%), Positives = 90/219 (41%), Gaps = 27/219 (12%)
Query: 724 ATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFH--QRYERALKSFQDECEVMKRIR 780
+ + F K +G G++G VY AR + G VA+K E + E ++K +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH 840
H N+VK++ ++ L+ E++ + + + I L I + L+ L
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPL-IKSYLFQLLQGLA 118
Query: 841 FGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYG 888
F HS ++H + ++DF +A+ + + T+ Y APE
Sbjct: 119 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEIL 176
Query: 889 VQGR-VSTRGDVYSYGIMLMET------FTGKKPTDEIF 920
+ + ST D++S G + E F G D++F
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 215
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 34.3 bits (77), Expect = 0.40, Method: Composition-based stats.
Identities = 49/219 (22%), Positives = 90/219 (41%), Gaps = 27/219 (12%)
Query: 724 ATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFH--QRYERALKSFQDECEVMKRIR 780
+ + F K +G G++G VY AR + G VA+K E + E ++K +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH 840
H N+VK++ ++ L+ E++ + + + I L I + L+ L
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPL-IKSYLFQLLQGLA 119
Query: 841 FGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYG 888
F HS ++H + ++DF +A+ + + T+ Y APE
Sbjct: 120 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYXHEVVTLWYRAPEIL 177
Query: 889 VQGR-VSTRGDVYSYGIMLMET------FTGKKPTDEIF 920
+ + ST D++S G + E F G D++F
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 216
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 34.3 bits (77), Expect = 0.40, Method: Composition-based stats.
Identities = 49/219 (22%), Positives = 90/219 (41%), Gaps = 27/219 (12%)
Query: 724 ATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFH--QRYERALKSFQDECEVMKRIR 780
+ + F K +G G++G VY AR + G VA+K E + E ++K +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH 840
H N+VK++ ++ L+ E++ + + + I L I + L+ L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPL-IKSYLFQLLQGLA 117
Query: 841 FGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYG 888
F HS ++H + ++DF +A+ + + T+ Y APE
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYXHEVVTLWYRAPEIL 175
Query: 889 VQGR-VSTRGDVYSYGIMLMET------FTGKKPTDEIF 920
+ + ST D++S G + E F G D++F
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 34.3 bits (77), Expect = 0.41, Method: Composition-based stats.
Identities = 49/219 (22%), Positives = 90/219 (41%), Gaps = 27/219 (12%)
Query: 724 ATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFH--QRYERALKSFQDECEVMKRIR 780
+ + F K +G G++G VY AR + G VA+K E + E ++K +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH 840
H N+VK++ ++ L+ E++ + + + I L I + L+ L
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPL-IKSYLFQLLQGLA 119
Query: 841 FGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYG 888
F HS ++H + ++DF +A+ + + T+ Y APE
Sbjct: 120 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGV--PVRTYXHEVVTLWYRAPEIL 177
Query: 889 VQGR-VSTRGDVYSYGIMLMET------FTGKKPTDEIF 920
+ + ST D++S G + E F G D++F
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 216
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 34.3 bits (77), Expect = 0.41, Method: Composition-based stats.
Identities = 49/219 (22%), Positives = 90/219 (41%), Gaps = 27/219 (12%)
Query: 724 ATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFH--QRYERALKSFQDECEVMKRIR 780
+ + F K +G G++G VY AR + G VA+K E + E ++K +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH 840
H N+VK++ ++ L+ E++ + + + I L I + L+ L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPL-IKSYLFQLLQGLA 117
Query: 841 FGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYG 888
F HS ++H + ++DF +A+ + + T+ Y APE
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYXHEVVTLWYRAPEIL 175
Query: 889 VQGR-VSTRGDVYSYGIMLMET------FTGKKPTDEIF 920
+ + ST D++S G + E F G D++F
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 33.9 bits (76), Expect = 0.41, Method: Composition-based stats.
Identities = 49/217 (22%), Positives = 89/217 (41%), Gaps = 27/217 (12%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFH--QRYERALKSFQDECEVMKRIRHR 782
+ F K +G G++G VY AR + G VA+K E + E ++K + H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 783 NLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFG 842
N+VK++ ++ L+ E++ + + + I L I + L+ L F
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPL-IKSYLFQLLQGLAFC 120
Query: 843 HSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQ 890
HS ++H + ++DF +A+ + + T+ Y APE +
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEILLG 178
Query: 891 GR-VSTRGDVYSYGIMLMET------FTGKKPTDEIF 920
+ ST D++S G + E F G D++F
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 215
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 33.9 bits (76), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 79/200 (39%), Gaps = 33/200 (16%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFH-QRYERALKSFQ-DECEVMKRIRHRNLVKIISAC 791
+G G++G VY A+ G A+K ++ + + S E ++K ++H N+VK+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 792 SNDDFKALIMEYMPN------GSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHST 845
L+ E++ E L S T + Q LN + + H
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIA----------YCHDR 119
Query: 846 PIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGV-QGR 892
++H + I+DF +A+ + T + T+ Y AP+ + +
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFG--IPVRKYTHEIVTLWYRAPDVLMGSKK 177
Query: 893 VSTRGDVYSYGIMLMETFTG 912
ST D++S G + E G
Sbjct: 178 YSTTIDIWSVGCIFAEMVNG 197
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 33.9 bits (76), Expect = 0.43, Method: Composition-based stats.
Identities = 49/217 (22%), Positives = 89/217 (41%), Gaps = 27/217 (12%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFH--QRYERALKSFQDECEVMKRIRHR 782
+ F K +G G++G VY AR + G VA+K E + E ++K + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 783 NLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFG 842
N+VK++ ++ L+ E++ + + + I L I + L+ L F
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPL-IKSYLFQLLQGLAFC 118
Query: 843 HSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQ 890
HS ++H + ++DF +A+ + + T+ Y APE +
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEILLG 176
Query: 891 GR-VSTRGDVYSYGIMLMET------FTGKKPTDEIF 920
+ ST D++S G + E F G D++F
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 213
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 33.9 bits (76), Expect = 0.47, Method: Composition-based stats.
Identities = 49/217 (22%), Positives = 89/217 (41%), Gaps = 27/217 (12%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFH--QRYERALKSFQDECEVMKRIRHR 782
+ F K +G G++G VY AR + G VA+K E + E ++K + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 783 NLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFG 842
N+VK++ ++ L+ E++ + + + I L I + L+ L F
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPL-IKSYLFQLLQGLAFC 118
Query: 843 HSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQ 890
HS ++H + ++DF +A+ + + T+ Y APE +
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYXHEVVTLWYRAPEILLG 176
Query: 891 GR-VSTRGDVYSYGIMLMET------FTGKKPTDEIF 920
+ ST D++S G + E F G D++F
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 213
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 33.9 bits (76), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 38/209 (18%), Positives = 80/209 (38%), Gaps = 24/209 (11%)
Query: 725 TDRFSKNNLLGIGSFGSVY-VARLQDGMEVAVKVFHQRY--ERALKSFQDECEVMKRIRH 781
T+ + LG G+F V ++ G E A + + + R + + E + + ++H
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKH 69
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHF 841
N+V++ + S + LI + + G L+ + + + + LE +
Sbjct: 70 PNIVRLHDSISEEGHHYLIFDLVTGGE----LFEDIVAREYYSEADASHCIQQILEAVLH 125
Query: 842 GHSTPIIHY---------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPE 886
H ++H ++DF +A + G+ Q T GY++PE
Sbjct: 126 CHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA--GTPGYLSPE 183
Query: 887 YGVQGRVSTRGDVYSYGIMLMETFTGKKP 915
+ D+++ G++L G P
Sbjct: 184 VLRKDPYGKPVDLWACGVILYILLVGYPP 212
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 33.5 bits (75), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 79/200 (39%), Gaps = 33/200 (16%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFH-QRYERALKSFQ-DECEVMKRIRHRNLVKIISAC 791
+G G++G VY A+ G A+K ++ + + S E ++K ++H N+VK+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 792 SNDDFKALIMEYMPN------GSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHST 845
L+ E++ E L S T + Q LN + + H
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIA----------YCHDR 119
Query: 846 PIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGV-QGR 892
++H + I+DF +A+ + T + T+ Y AP+ + +
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFG--IPVRKYTHEVVTLWYRAPDVLMGSKK 177
Query: 893 VSTRGDVYSYGIMLMETFTG 912
ST D++S G + E G
Sbjct: 178 YSTTIDIWSVGCIFAEMVNG 197
>pdb|4ARN|A Chain A, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARN|B Chain B, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARN|C Chain C, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARN|D Chain D, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARR|A Chain A, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor With The Magic Triangle I3c
pdb|4ARR|B Chain B, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor With The Magic Triangle I3c
Length = 279
Score = 33.5 bits (75), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 68/130 (52%), Gaps = 18/130 (13%)
Query: 174 RNMFHGKIPSTL-SKCKQLEGLYLRFNNLSGAIPKEI-GNLTKLKDIILNDNELRGEIPQ 231
R + H IP+ L + + L L LR N +P + +L L+ I N+LR ++P+
Sbjct: 133 RRLTH--IPANLLTDMRNLSHLELRAN--IEEMPSHLFDDLENLESIEFGSNKLR-QMPR 187
Query: 232 EM-GNLPYLVRLTLATNNLVGVVPFTIFN-MSTLKKLSLLENTLWGSLPSRIDLSLPNVE 289
+ G +P L +L LA+N L VP IF+ +++L+K+ L N W D S P ++
Sbjct: 188 GIFGKMPKLKQLNLASNQLKS-VPDGIFDRLTSLQKIWLHTNP-W-------DCSCPRID 238
Query: 290 FLNLGTNRFS 299
+L+ N+ S
Sbjct: 239 YLSRWLNKNS 248
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 33.5 bits (75), Expect = 0.55, Method: Composition-based stats.
Identities = 44/221 (19%), Positives = 85/221 (38%), Gaps = 34/221 (15%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALK------SFQDECEVMKR 778
D + LG G F V R + G++ A K +R ++ + + E ++K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 779 IRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEY 838
I+H N++ + N LI+E + G L + L + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYY 129
Query: 839 LHFGHSTPIIHYMVA----------------HISDFSIAKFLNGQDQLSMQTQTLATIGY 882
L HS I H+ + I DF +A ++ ++ T +
Sbjct: 130 L---HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEF 183
Query: 883 MAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGE 923
+APE + D++S G++ +G P F+G+
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP----FLGD 220
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 33.5 bits (75), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 79/200 (39%), Gaps = 33/200 (16%)
Query: 734 LGIGSFGSVYVARLQDGMEVAVKVFH-QRYERALKSFQ-DECEVMKRIRHRNLVKIISAC 791
+G G++G VY A+ G A+K ++ + + S E ++K ++H N+VK+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 792 SNDDFKALIMEYMPN------GSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHST 845
L+ E++ E L S T + Q LN + + H
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIA----------YCHDR 119
Query: 846 PIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGV-QGR 892
++H + I+DF +A+ + T + T+ Y AP+ + +
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFG--IPVRKYTHEVVTLWYRAPDVLMGSKK 177
Query: 893 VSTRGDVYSYGIMLMETFTG 912
ST D++S G + E G
Sbjct: 178 YSTTIDIWSVGCIFAEMVNG 197
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 33.5 bits (75), Expect = 0.57, Method: Composition-based stats.
Identities = 44/221 (19%), Positives = 85/221 (38%), Gaps = 34/221 (15%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALK------SFQDECEVMKR 778
D + LG G F V R + G++ A K +R ++ + + E ++K
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69
Query: 779 IRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEY 838
I+H N++ + N LI+E + G L + L + + + + + + Y
Sbjct: 70 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYY 128
Query: 839 LHFGHSTPIIHYMVA----------------HISDFSIAKFLNGQDQLSMQTQTLATIGY 882
L HS I H+ + I DF +A ++ ++ T +
Sbjct: 129 L---HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEF 182
Query: 883 MAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGE 923
+APE + D++S G++ +G P F+G+
Sbjct: 183 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP----FLGD 219
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 33.5 bits (75), Expect = 0.57, Method: Composition-based stats.
Identities = 44/221 (19%), Positives = 85/221 (38%), Gaps = 34/221 (15%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALK------SFQDECEVMKR 778
D + LG G F V R + G++ A K +R ++ + + E ++K
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69
Query: 779 IRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEY 838
I+H N++ + N LI+E + G L + L + + + + + + Y
Sbjct: 70 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYY 128
Query: 839 LHFGHSTPIIHYMVA----------------HISDFSIAKFLNGQDQLSMQTQTLATIGY 882
L HS I H+ + I DF +A ++ ++ T +
Sbjct: 129 L---HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEF 182
Query: 883 MAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGE 923
+APE + D++S G++ +G P F+G+
Sbjct: 183 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP----FLGD 219
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 33.5 bits (75), Expect = 0.57, Method: Composition-based stats.
Identities = 44/221 (19%), Positives = 85/221 (38%), Gaps = 34/221 (15%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALK------SFQDECEVMKR 778
D + LG G F V R + G++ A K +R ++ + + E ++K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 779 IRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEY 838
I+H N++ + N LI+E + G L + L + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYY 129
Query: 839 LHFGHSTPIIHYMVA----------------HISDFSIAKFLNGQDQLSMQTQTLATIGY 882
L HS I H+ + I DF +A ++ ++ T +
Sbjct: 130 L---HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEF 183
Query: 883 MAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGE 923
+APE + D++S G++ +G P F+G+
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP----FLGD 220
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 33.5 bits (75), Expect = 0.57, Method: Composition-based stats.
Identities = 44/221 (19%), Positives = 85/221 (38%), Gaps = 34/221 (15%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALK------SFQDECEVMKR 778
D + LG G F V R + G++ A K +R ++ + + E ++K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 779 IRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEY 838
I+H N++ + N LI+E + G L + L + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYY 129
Query: 839 LHFGHSTPIIHYMVA----------------HISDFSIAKFLNGQDQLSMQTQTLATIGY 882
L HS I H+ + I DF +A ++ ++ T +
Sbjct: 130 L---HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEF 183
Query: 883 MAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGE 923
+APE + D++S G++ +G P F+G+
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP----FLGD 220
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 33.5 bits (75), Expect = 0.58, Method: Composition-based stats.
Identities = 44/221 (19%), Positives = 85/221 (38%), Gaps = 34/221 (15%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALK------SFQDECEVMKR 778
D + LG G F V R + G++ A K +R ++ + + E ++K
Sbjct: 11 DYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 779 IRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEY 838
I+H N++ + N LI+E + G L + L + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYY 129
Query: 839 LHFGHSTPIIHYMVA----------------HISDFSIAKFLNGQDQLSMQTQTLATIGY 882
L HS I H+ + I DF +A ++ ++ T +
Sbjct: 130 L---HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEF 183
Query: 883 MAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGE 923
+APE + D++S G++ +G P F+G+
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP----FLGD 220
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 33.5 bits (75), Expect = 0.60, Method: Composition-based stats.
Identities = 49/228 (21%), Positives = 89/228 (39%), Gaps = 45/228 (19%)
Query: 724 ATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFH--QRYERALKSFQDECEVMKRIR 780
+ + F K +G G++G VY AR + G VA+K E + E ++K +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALA----- 835
H N+VK++ ++ L+ E++ L F + + + L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQD------------LKDFMDASALTGIPLPLIKSY 108
Query: 836 ----LEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLAT 879
L+ L F HS ++H + ++DF +A+ + + T
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGV--PVRTYXHEVVT 166
Query: 880 IGYMAPEYGVQGR-VSTRGDVYSYGIMLMET------FTGKKPTDEIF 920
+ Y APE + + ST D++S G + E F G D++F
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 33.5 bits (75), Expect = 0.60, Method: Composition-based stats.
Identities = 49/219 (22%), Positives = 90/219 (41%), Gaps = 27/219 (12%)
Query: 724 ATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFH--QRYERALKSFQDECEVMKRIR 780
+ + F K +G G++G VY AR + G VA+K E + E ++K +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 781 HRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH 840
H N+VK++ ++ L+ E++ + + + I L I + L+ L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHVDQDL--KKFMDASALTGIPLPL-IKSYLFQLLQGLA 120
Query: 841 FGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYG 888
F HS ++H + ++DF +A+ + + T+ Y APE
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEIL 178
Query: 889 VQGR-VSTRGDVYSYGIMLMET------FTGKKPTDEIF 920
+ + ST D++S G + E F G D++F
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 217
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 33.5 bits (75), Expect = 0.62, Method: Composition-based stats.
Identities = 44/221 (19%), Positives = 85/221 (38%), Gaps = 34/221 (15%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALK------SFQDECEVMKR 778
D + LG G F V R + G++ A K +R ++ + + E ++K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 779 IRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEY 838
I+H N++ + N LI+E + G L + L + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYY 129
Query: 839 LHFGHSTPIIHYMVA----------------HISDFSIAKFLNGQDQLSMQTQTLATIGY 882
L HS I H+ + I DF +A ++ ++ T +
Sbjct: 130 L---HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEF 183
Query: 883 MAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGE 923
+APE + D++S G++ +G P F+G+
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP----FLGD 220
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 33.5 bits (75), Expect = 0.63, Method: Composition-based stats.
Identities = 44/221 (19%), Positives = 85/221 (38%), Gaps = 34/221 (15%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALK------SFQDECEVMKR 778
D + LG G F V R + G++ A K +R ++ + + E ++K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 779 IRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEY 838
I+H N++ + N LI+E + G L + L + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYY 129
Query: 839 LHFGHSTPIIHYMVA----------------HISDFSIAKFLNGQDQLSMQTQTLATIGY 882
L HS I H+ + I DF +A ++ ++ T +
Sbjct: 130 L---HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEF 183
Query: 883 MAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGE 923
+APE + D++S G++ +G P F+G+
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP----FLGD 220
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 33.5 bits (75), Expect = 0.65, Method: Composition-based stats.
Identities = 44/221 (19%), Positives = 85/221 (38%), Gaps = 34/221 (15%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALK------SFQDECEVMKR 778
D + LG G F V R + G++ A K +R ++ + + E ++K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 779 IRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEY 838
I+H N++ + N LI+E + G L + L + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYY 129
Query: 839 LHFGHSTPIIHYMVA----------------HISDFSIAKFLNGQDQLSMQTQTLATIGY 882
L HS I H+ + I DF +A ++ ++ T +
Sbjct: 130 L---HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEF 183
Query: 883 MAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGE 923
+APE + D++S G++ +G P F+G+
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP----FLGD 220
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 33.5 bits (75), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 85/221 (38%), Gaps = 34/221 (15%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALK------SFQDECEVMKR 778
D + LG G F V R + G++ A K +R ++ + + E ++K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 779 IRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEY 838
I+H N++ + N LI+E + G L + L + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYY 129
Query: 839 LHFGHSTPIIHYMVA----------------HISDFSIAKFLNGQDQLSMQTQTLATIGY 882
L HS I H+ + I DF +A ++ ++ T +
Sbjct: 130 L---HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPAF 183
Query: 883 MAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGE 923
+APE + D++S G++ +G P F+G+
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP----FLGD 220
>pdb|3VQ1|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ1|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ2|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
pdb|3VQ2|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
Length = 606
Score = 33.1 bits (74), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 39/82 (47%)
Query: 514 DVSSNSLDGPLSLDIGNLKVVIELNLSRNNLSGDIPITIGGLKNLQKLFLANNRLEGPIP 573
D+S N L S N + L+LSR + GL +L L L N ++ P
Sbjct: 38 DLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSP 97
Query: 574 ESFSGLSSLEILDLSKNKISGV 595
SFSGL+SLE L + K++ +
Sbjct: 98 GSFSGLTSLENLVAVETKLASL 119
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 33.1 bits (74), Expect = 0.74, Method: Composition-based stats.
Identities = 38/200 (19%), Positives = 78/200 (39%), Gaps = 24/200 (12%)
Query: 734 LGIGSFGSVY-VARLQDGMEVAVKVFHQR--YERALKSFQDECEVMKRIRHRNLVKIISA 790
LG G+F V ++ G E A K+ + + R + + E + + ++H N+V++ +
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 791 CSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHY 850
S + LI + + G L+ + + + + LE + H ++H
Sbjct: 90 ISEEGHHYLIFDLVTGG----ELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHR 145
Query: 851 ---------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVST 895
++DF +A + G+ Q T GY++PE +
Sbjct: 146 DLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA--GTPGYLSPEVLRKDPYGK 203
Query: 896 RGDVYSYGIMLMETFTGKKP 915
D+++ G++L G P
Sbjct: 204 PVDLWACGVILYILLVGYPP 223
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 33.1 bits (74), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 83/211 (39%), Gaps = 34/211 (16%)
Query: 728 FSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVK 786
FS + ++G G FG VY R D G A+K + + +K Q E + R ++
Sbjct: 190 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDK---KRIKMKQGETLALN---ERIMLS 243
Query: 787 IIS------------ACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVAL 834
++S A D + I++ M G L L + R ++ L
Sbjct: 244 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIIL 302
Query: 835 ALEYLH-----FGHSTPIIHYMVAH----ISDFSIAKFLNGQDQLSMQTQTLATIGYMAP 885
LE++H + P + H ISD +A + + + ++ T GYMAP
Sbjct: 303 GLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA----SVGTHGYMAP 358
Query: 886 EYGVQG-RVSTRGDVYSYGIMLMETFTGKKP 915
E +G + D +S G ML + G P
Sbjct: 359 EVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 389
>pdb|2Z64|A Chain A, Crystal Structure Of Mouse Tlr4 And Mouse Md-2 Complex
Length = 599
Score = 33.1 bits (74), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 39/82 (47%)
Query: 514 DVSSNSLDGPLSLDIGNLKVVIELNLSRNNLSGDIPITIGGLKNLQKLFLANNRLEGPIP 573
D+S N L S N + L+LSR + GL +L L L N ++ P
Sbjct: 33 DLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSP 92
Query: 574 ESFSGLSSLEILDLSKNKISGV 595
SFSGL+SLE L + K++ +
Sbjct: 93 GSFSGLTSLENLVAVETKLASL 114
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 33.1 bits (74), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 83/211 (39%), Gaps = 34/211 (16%)
Query: 728 FSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVK 786
FS + ++G G FG VY R D G A+K + + +K Q E + R ++
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDK---KRIKMKQGETLALN---ERIMLS 244
Query: 787 IIS------------ACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVAL 834
++S A D + I++ M G L L + R ++ L
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIIL 303
Query: 835 ALEYLH-----FGHSTPIIHYMVAH----ISDFSIAKFLNGQDQLSMQTQTLATIGYMAP 885
LE++H + P + H ISD +A + + + ++ T GYMAP
Sbjct: 304 GLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA----SVGTHGYMAP 359
Query: 886 EYGVQG-RVSTRGDVYSYGIMLMETFTGKKP 915
E +G + D +S G ML + G P
Sbjct: 360 EVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 33.1 bits (74), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 83/211 (39%), Gaps = 34/211 (16%)
Query: 728 FSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVK 786
FS + ++G G FG VY R D G A+K + + +K Q E + R ++
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDK---KRIKMKQGETLALN---ERIMLS 244
Query: 787 IIS------------ACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVAL 834
++S A D + I++ M G L L + R ++ L
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIIL 303
Query: 835 ALEYLH-----FGHSTPIIHYMVAH----ISDFSIAKFLNGQDQLSMQTQTLATIGYMAP 885
LE++H + P + H ISD +A + + + ++ T GYMAP
Sbjct: 304 GLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA----SVGTHGYMAP 359
Query: 886 EYGVQG-RVSTRGDVYSYGIMLMETFTGKKP 915
E +G + D +S G ML + G P
Sbjct: 360 EVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 33.1 bits (74), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 83/211 (39%), Gaps = 34/211 (16%)
Query: 728 FSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVK 786
FS + ++G G FG VY R D G A+K + + +K Q E + R ++
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDK---KRIKMKQGETLALN---ERIMLS 244
Query: 787 IIS------------ACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVAL 834
++S A D + I++ M G L L + R ++ L
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIIL 303
Query: 835 ALEYLH-----FGHSTPIIHYMVAH----ISDFSIAKFLNGQDQLSMQTQTLATIGYMAP 885
LE++H + P + H ISD +A + + + ++ T GYMAP
Sbjct: 304 GLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA----SVGTHGYMAP 359
Query: 886 EYGVQG-RVSTRGDVYSYGIMLMETFTGKKP 915
E +G + D +S G ML + G P
Sbjct: 360 EVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 33.1 bits (74), Expect = 0.89, Method: Composition-based stats.
Identities = 44/221 (19%), Positives = 85/221 (38%), Gaps = 34/221 (15%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALK------SFQDECEVMKR 778
D + LG G F V R + G++ A K +R ++ + + E ++K
Sbjct: 11 DYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 779 IRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEY 838
I+H N++ + N LI+E + G L + L + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYY 129
Query: 839 LHFGHSTPIIHYMVA----------------HISDFSIAKFLNGQDQLSMQTQTLATIGY 882
L HS I H+ + I DF +A ++ ++ T +
Sbjct: 130 L---HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEF 183
Query: 883 MAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGE 923
+APE + D++S G++ +G P F+G+
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP----FLGD 220
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 32.7 bits (73), Expect = 1.0, Method: Composition-based stats.
Identities = 36/164 (21%), Positives = 68/164 (41%), Gaps = 23/164 (14%)
Query: 770 QDECEVMKRIRHRNLVKIISACSNDDFKA--LIMEYMPNGSLENRLYSGTCMLDIFQRLN 827
+ E ++++R+RH+N+++++ N++ + ++MEY G E + Q
Sbjct: 54 KKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHG 113
Query: 828 IMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLN--GQDQLSMQ 873
+ LEYL HS I+H + IS +A+ L+ D
Sbjct: 114 YFCQLIDGLEYL---HSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRT 170
Query: 874 TQTLATIGYMAPEY--GVQGRVSTRGDVYSYGIMLMETFTGKKP 915
+Q + + PE G+ + D++S G+ L TG P
Sbjct: 171 SQ--GSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYP 212
>pdb|3PMH|G Chain G, Mechanism Of Sulfotyrosine-Mediated Glycoprotein Ib
Interaction With Two Distinct Alpha-Thrombin Sites
Length = 290
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%)
Query: 194 LYLRFNNLSGAIPKEIGNLTKLKDIILNDNELRGEIPQEMGNLPYLVRLTLATNNLVGVV 253
L + FN L+ + L +L+++ L NEL+ P + P L +L+LA NNL +
Sbjct: 105 LDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELP 164
Query: 254 PFTIFNMSTLKKLSLLENTLW 274
+ + L L L EN+L+
Sbjct: 165 AGLLNGLENLDTLLLQENSLY 185
Score = 30.4 bits (67), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 15/120 (12%)
Query: 244 LATNNLVGVVPFTIFNMSTLKKLSLLENTLWGSLP--SRIDLS-------------LPNV 288
L T +L ++P+T L + L + + G+LP +DLS LP +
Sbjct: 43 LYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPAL 102
Query: 289 EFLNLGTNRFSGNIPSSITNASKLTVFQLRGNSFSGFIPNTIGNLRNLEFLNIADNYLTS 348
L++ NR + ++ +L L+GN P + LE L++A+N LT
Sbjct: 103 TVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTE 162
Score = 30.0 bits (66), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 51/116 (43%), Gaps = 7/116 (6%)
Query: 480 SGNLTSLRALYLGSNRFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLK---VVIE 536
G L L L L N+ S LP L + DVS N L SL +G L+ + E
Sbjct: 73 DGTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLT---SLPLGALRGLGELQE 128
Query: 537 LNLSRNNLSGDIPITIGGLKNLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNKI 592
L L N L P + L+KL LANN L +GL +L+ L L +N +
Sbjct: 129 LYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSL 184
>pdb|1OOK|G Chain G, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Human Alpha-thrombin
Length = 290
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%)
Query: 194 LYLRFNNLSGAIPKEIGNLTKLKDIILNDNELRGEIPQEMGNLPYLVRLTLATNNLVGVV 253
L + FN L+ + L +L+++ L NEL+ P + P L +L+LA NNL +
Sbjct: 105 LDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELP 164
Query: 254 PFTIFNMSTLKKLSLLENTLW 274
+ + L L L EN+L+
Sbjct: 165 AGLLNGLENLDTLLLQENSLY 185
Score = 30.4 bits (67), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 15/120 (12%)
Query: 244 LATNNLVGVVPFTIFNMSTLKKLSLLENTLWGSLP--SRIDLS-------------LPNV 288
L T +L ++P+T L + L + + G+LP +DLS LP +
Sbjct: 43 LYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPAL 102
Query: 289 EFLNLGTNRFSGNIPSSITNASKLTVFQLRGNSFSGFIPNTIGNLRNLEFLNIADNYLTS 348
L++ NR + ++ +L L+GN P + LE L++A+N LT
Sbjct: 103 TVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTE 162
Score = 30.0 bits (66), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 51/116 (43%), Gaps = 7/116 (6%)
Query: 480 SGNLTSLRALYLGSNRFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLK---VVIE 536
G L L L L N+ S LP L + DVS N L SL +G L+ + E
Sbjct: 73 DGTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLT---SLPLGALRGLGELQE 128
Query: 537 LNLSRNNLSGDIPITIGGLKNLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNKI 592
L L N L P + L+KL LANN L +GL +L+ L L +N +
Sbjct: 129 LYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSL 184
>pdb|2Z80|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
pdb|2Z80|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 353
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%)
Query: 529 GNLKVVIELNLSRNNLSGDIPITIGGLKNLQKLFLANNRLEGPIPESFSGLSSLEILDLS 588
G + V L+LS N ++ + NLQ L L +N + +SFS L SLE LDLS
Sbjct: 49 GLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLS 108
Query: 589 KNKISGV 595
N +S +
Sbjct: 109 YNYLSNL 115
>pdb|1P8V|A Chain A, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Alpha-thrombin At 2.6a
Length = 279
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%)
Query: 194 LYLRFNNLSGAIPKEIGNLTKLKDIILNDNELRGEIPQEMGNLPYLVRLTLATNNLVGVV 253
L + FN L+ + L +L+++ L NEL+ P + P L +L+LA NNL +
Sbjct: 105 LDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELP 164
Query: 254 PFTIFNMSTLKKLSLLENTLW 274
+ + L L L EN+L+
Sbjct: 165 AGLLNGLENLDTLLLQENSLY 185
Score = 30.4 bits (67), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 15/120 (12%)
Query: 244 LATNNLVGVVPFTIFNMSTLKKLSLLENTLWGSLP--SRIDLS-------------LPNV 288
L T +L ++P+T L + L + + G+LP +DLS LP +
Sbjct: 43 LYTFSLATLMPYTRLTQLNLDRCELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPAL 102
Query: 289 EFLNLGTNRFSGNIPSSITNASKLTVFQLRGNSFSGFIPNTIGNLRNLEFLNIADNYLTS 348
L++ NR + ++ +L L+GN P + LE L++A+N LT
Sbjct: 103 TVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTE 162
Score = 30.0 bits (66), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 51/116 (43%), Gaps = 7/116 (6%)
Query: 480 SGNLTSLRALYLGSNRFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLK---VVIE 536
G L L L L N+ S LP L + DVS N L SL +G L+ + E
Sbjct: 73 DGTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLT---SLPLGALRGLGELQE 128
Query: 537 LNLSRNNLSGDIPITIGGLKNLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNKI 592
L L N L P + L+KL LANN L +GL +L+ L L +N +
Sbjct: 129 LYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSL 184
>pdb|1GWB|B Chain B, Structure Of Glycoprotein 1b
pdb|1GWB|A Chain A, Structure Of Glycoprotein 1b
Length = 281
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%)
Query: 194 LYLRFNNLSGAIPKEIGNLTKLKDIILNDNELRGEIPQEMGNLPYLVRLTLATNNLVGVV 253
L + FN L+ + L +L+++ L NEL+ P + P L +L+LA NNL +
Sbjct: 106 LDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELP 165
Query: 254 PFTIFNMSTLKKLSLLENTLW 274
+ + L L L EN+L+
Sbjct: 166 AGLLNGLENLDTLLLQENSLY 186
Score = 30.0 bits (66), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 15/120 (12%)
Query: 244 LATNNLVGVVPFTIFNMSTLKKLSLLENTLWGSLP--SRIDLS-------------LPNV 288
L T +L ++P+T L + L + + G+LP +DLS LP +
Sbjct: 44 LYTFSLATLMPYTRLTQLNLDRCELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPAL 103
Query: 289 EFLNLGTNRFSGNIPSSITNASKLTVFQLRGNSFSGFIPNTIGNLRNLEFLNIADNYLTS 348
L++ NR + ++ +L L+GN P + LE L++A+N LT
Sbjct: 104 TVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTE 163
Score = 30.0 bits (66), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 51/116 (43%), Gaps = 7/116 (6%)
Query: 480 SGNLTSLRALYLGSNRFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLK---VVIE 536
G L L L L N+ S LP L + DVS N L SL +G L+ + E
Sbjct: 74 DGTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLT---SLPLGALRGLGELQE 129
Query: 537 LNLSRNNLSGDIPITIGGLKNLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNKI 592
L L N L P + L+KL LANN L +GL +L+ L L +N +
Sbjct: 130 LYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSL 185
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 85/221 (38%), Gaps = 34/221 (15%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALK------SFQDECEVMKR 778
D + LG G F V R + G++ A K +R ++ + + E ++K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 779 IRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEY 838
I+H N++ + N LI+E + G L + L + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYY 129
Query: 839 LHFGHSTPIIHYMVA----------------HISDFSIAKFLNGQDQLSMQTQTLATIGY 882
L HS I H+ + I DF +A ++ ++ T +
Sbjct: 130 L---HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEF 183
Query: 883 MAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGE 923
+APE + D++S G++ +G P F+G+
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP----FLGD 220
>pdb|2Z7X|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 549
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%)
Query: 525 SLDIGNLKVVIELNLSRNNLSGDIPITIGGLKNLQKLFLANNRLEGPIPESFSGLSSLEI 584
S+ G + V L+LS N ++ + NLQ L L +N + +SFS L SLE
Sbjct: 19 SIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEH 78
Query: 585 LDLSKNKISGV 595
LDLS N +S +
Sbjct: 79 LDLSYNYLSNL 89
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 719 HELLQATDRFSKNNLLGIGSFGSVYVARLQDGME---VAVKVFHQRYERAL--KSFQDEC 773
H Q DR+ +L+G GS+G +V D +E VA+K + +E + K E
Sbjct: 46 HSDWQIPDRYEIRHLIGTGSYG--HVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREI 103
Query: 774 EVMKRIRHRNLVKIIS 789
++ R+ H ++VK++
Sbjct: 104 AILNRLNHDHVVKVLD 119
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 88/224 (39%), Gaps = 28/224 (12%)
Query: 715 RFSYHELLQAT----DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKSF 769
RF + L+A D F +LG G FG V+ +++ G A K +++ + K +
Sbjct: 170 RFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGY 229
Query: 770 QD---ECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRL 826
Q E +++ ++ R +V + A L+M M G + +Y+ FQ
Sbjct: 230 QGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP 289
Query: 827 NIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLSMQT 874
+ A + L H II+ + ISD +A L + QT
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK-----AGQT 344
Query: 875 QT---LATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKP 915
+T T G+MAPE + D ++ G+ L E + P
Sbjct: 345 KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 88/224 (39%), Gaps = 28/224 (12%)
Query: 715 RFSYHELLQAT----DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKSF 769
RF + L+A D F +LG G FG V+ +++ G A K +++ + K +
Sbjct: 170 RFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGY 229
Query: 770 QD---ECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRL 826
Q E +++ ++ R +V + A L+M M G + +Y+ FQ
Sbjct: 230 QGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP 289
Query: 827 NIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLSMQT 874
+ A + L H II+ + ISD +A L + QT
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK-----AGQT 344
Query: 875 QT---LATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKP 915
+T T G+MAPE + D ++ G+ L E + P
Sbjct: 345 KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 85/221 (38%), Gaps = 34/221 (15%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALK------SFQDECEVMKR 778
D + LG G F V R + G++ A K +R ++ + + E ++K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 779 IRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEY 838
I+H N++ + N LI+E + G L + L + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYY 129
Query: 839 LHFGHSTPIIHYMVA----------------HISDFSIAKFLNGQDQLSMQTQTLATIGY 882
L HS I H+ + I DF +A ++ ++ T +
Sbjct: 130 L---HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEF 183
Query: 883 MAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGE 923
+APE + D++S G++ +G P F+G+
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP----FLGD 220
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 81/199 (40%), Gaps = 17/199 (8%)
Query: 733 LLGIGSFGSVYVARLQDGMEV-AVKVFHQRYERALKSFQDECE-VMKRI-----RHRNLV 785
+LG GSFG V +A + E+ A+K+ + + ++ EC V KR+ + L
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIKILKK--DVVIQDDDVECTMVEKRVLALLDKPPFLT 83
Query: 786 KIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH----F 841
++ S D +MEY+ G L + Q + ++++ L +LH
Sbjct: 84 QLHSCFQTVDRLYFVMEYVNGGDLMYHI-QQVGKFKEPQAVFYAAEISIGLFFLHKRGII 142
Query: 842 GHSTPIIHYMVAHISDFSIAKFLNGQDQLSMQTQTLATIG---YMAPEYGVQGRVSTRGD 898
+ + M+ IA F ++ + T G Y+APE D
Sbjct: 143 YRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVD 202
Query: 899 VYSYGIMLMETFTGKKPTD 917
++YG++L E G+ P D
Sbjct: 203 WWAYGVLLYEMLAGQPPFD 221
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 88/224 (39%), Gaps = 28/224 (12%)
Query: 715 RFSYHELLQAT----DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKSF 769
RF + L+A D F +LG G FG V+ +++ G A K +++ + K +
Sbjct: 170 RFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGY 229
Query: 770 QD---ECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRL 826
Q E +++ ++ R +V + A L+M M G + +Y+ FQ
Sbjct: 230 QGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP 289
Query: 827 NIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLSMQT 874
+ A + L H II+ + ISD +A L + QT
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK-----AGQT 344
Query: 875 QT---LATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKP 915
+T T G+MAPE + D ++ G+ L E + P
Sbjct: 345 KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 84/216 (38%), Gaps = 34/216 (15%)
Query: 733 LLGIGSFGSVYVARLQDGMEV-AVKVF--------HQRYERALKSFQDECEVMKRIRHRN 783
LG G F + D EV A K+ HQR + ++ E + + + H++
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM-----EISIHRSLAHQH 82
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGH 843
+V ++DF +++E SL L+ L + + + L +YLH
Sbjct: 83 VVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR 141
Query: 844 STPIIHY------------MVAHISDFSIAKFLNGQDQLSMQTQTLA-TIGYMAPEYGVQ 890
+IH + I DF +A + + + +TL T Y+APE +
Sbjct: 142 ---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE---RKKTLCGTPNYIAPEVLSK 195
Query: 891 GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSL 926
S DV+S G ++ GK P + + E L
Sbjct: 196 KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL 231
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 92/218 (42%), Gaps = 44/218 (20%)
Query: 727 RFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYER------ALKSFQDECEVMKRI 779
++ K +G G+FG V+ AR + G +VA+K E+ AL+ E ++++ +
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR----EIKILQLL 74
Query: 780 RHRNLVKIISACSN-----DDFKALIM------EYMPNGSLENRLYSGTCMLDIFQRLNI 828
+H N+V +I C + KA I E+ G L N L T L +R+
Sbjct: 75 KHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFT--LSEIKRVMQ 132
Query: 829 MIDVALALEYLHFGHSTPIIHYM------------VAHISDFSIAKF--LNGQDQLSMQT 874
M+ L L++ H I+H V ++DF +A+ L Q +
Sbjct: 133 ML-----LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 875 QTLATIGYMAPEYGVQGR-VSTRGDVYSYGIMLMETFT 911
+ T+ Y PE + R D++ G ++ E +T
Sbjct: 188 NRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 89/205 (43%), Gaps = 22/205 (10%)
Query: 727 RFSKNNLLGIGSFGSVYVARLQDGME-VAVKV--FHQRYERALKSFQDECEVMKRIRHRN 783
++ K +G G++G+V+ A+ ++ E VA+K E S E ++K ++H+N
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGH 843
+V++ +D L+ E+ + + Y +C D+ + L L+ L F H
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFC---DQDLKKYFDSCNGDLDPEIVKSFLFQL-LKGLGFCH 118
Query: 844 STPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQG 891
S ++H + +++F +A+ + + + T+ Y P+
Sbjct: 119 SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGI--PVRCYSAEVVTLWYRPPDVLFGA 176
Query: 892 RV-STRGDVYSYGIMLMETFTGKKP 915
++ ST D++S G + E +P
Sbjct: 177 KLYSTSIDMWSAGCIFAELANAGRP 201
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 32.3 bits (72), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 88/224 (39%), Gaps = 28/224 (12%)
Query: 715 RFSYHELLQAT----DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKSF 769
RF + L+A D F +LG G FG V+ +++ G A K +++ + K +
Sbjct: 170 RFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGY 229
Query: 770 QD---ECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRL 826
Q E +++ ++ R +V + A L+M M G + +Y+ FQ
Sbjct: 230 QGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP 289
Query: 827 NIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLSMQT 874
+ A + L H II+ + ISD +A L + QT
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK-----AGQT 344
Query: 875 QT---LATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKP 915
+T T G+MAPE + D ++ G+ L E + P
Sbjct: 345 KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 32.3 bits (72), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 84/216 (38%), Gaps = 34/216 (15%)
Query: 733 LLGIGSFGSVYVARLQDGMEV-AVKVF--------HQRYERALKSFQDECEVMKRIRHRN 783
LG G F + D EV A K+ HQR + ++ E + + + H++
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM-----EISIHRSLAHQH 78
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGH 843
+V ++DF +++E SL L+ L + + + L +YLH
Sbjct: 79 VVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR 137
Query: 844 STPIIHY------------MVAHISDFSIAKFLNGQDQLSMQTQTLA-TIGYMAPEYGVQ 890
+IH + I DF +A + + + +TL T Y+APE +
Sbjct: 138 ---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE---RKKTLCGTPNYIAPEVLSK 191
Query: 891 GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSL 926
S DV+S G ++ GK P + + E L
Sbjct: 192 KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL 227
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 32.3 bits (72), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 84/216 (38%), Gaps = 34/216 (15%)
Query: 733 LLGIGSFGSVYVARLQDGMEV-AVKVF--------HQRYERALKSFQDECEVMKRIRHRN 783
LG G F + D EV A K+ HQR + ++ E + + + H++
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM-----EISIHRSLAHQH 78
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGH 843
+V ++DF +++E SL L+ L + + + L +YLH
Sbjct: 79 VVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR 137
Query: 844 STPIIHY------------MVAHISDFSIAKFLNGQDQLSMQTQTLA-TIGYMAPEYGVQ 890
+IH + I DF +A + + + +TL T Y+APE +
Sbjct: 138 ---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE---RKKTLCGTPNYIAPEVLSK 191
Query: 891 GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSL 926
S DV+S G ++ GK P + + E L
Sbjct: 192 KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL 227
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 89/224 (39%), Gaps = 34/224 (15%)
Query: 723 QATDRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALK------SFQDECEV 775
+ D + LG G F V R + G+E A K +R RA + + E +
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSI 68
Query: 776 MKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALA 835
++++ H N++ + N LI+E + G L + L + + + + + +
Sbjct: 69 LRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE-EATSFIKQILDG 127
Query: 836 LEYLHFGHSTPIIHYM--------------VAHIS--DFSIAKFLNGQDQLSMQTQTLAT 879
+ YL H+ I H+ + HI DF +A + +D + + T
Sbjct: 128 VNYL---HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGVEFKN-IFGT 181
Query: 880 IGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGE 923
++APE + D++S G++ +G P F+G+
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP----FLGD 221
>pdb|1ZIW|A Chain A, Human Toll-Like Receptor 3 Extracellular Domain Structure
Length = 680
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 531 LKVVIELNLSRNNLSGDIPITIGGLKNLQKLFLANN--RLEGPIPESFSGL--SSLEILD 586
LK + LN+ N++ G GL NL+ L L+N+ L E+F L S L IL+
Sbjct: 328 LKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILN 387
Query: 587 LSKNKISGV 595
L+KNKIS +
Sbjct: 388 LTKNKISKI 396
>pdb|2A0Z|A Chain A, The Molecular Structure Of Toll-like Receptor 3 Ligand
Binding Domain
Length = 705
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 531 LKVVIELNLSRNNLSGDIPITIGGLKNLQKLFLANN--RLEGPIPESFSGL--SSLEILD 586
LK + LN+ N++ G GL NL+ L L+N+ L E+F L S L IL+
Sbjct: 333 LKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILN 392
Query: 587 LSKNKISGV 595
L+KNKIS +
Sbjct: 393 LTKNKISKI 401
>pdb|3ULU|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form1)
pdb|3ULV|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form2)
Length = 694
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 531 LKVVIELNLSRNNLSGDIPITIGGLKNLQKLFLANN--RLEGPIPESFSGL--SSLEILD 586
LK + LN+ N++ G GL NL+ L L+N+ L E+F L S L IL+
Sbjct: 338 LKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILN 397
Query: 587 LSKNKISGV 595
L+KNKIS +
Sbjct: 398 LTKNKISKI 406
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 32.0 bits (71), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 11/72 (15%)
Query: 727 RFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYER------ALKSFQDECEVMKRI 779
++ K +G G+FG V+ AR + G +VA+K E+ AL+ E ++++ +
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR----EIKILQLL 74
Query: 780 RHRNLVKIISAC 791
+H N+V +I C
Sbjct: 75 KHENVVNLIEIC 86
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 32.0 bits (71), Expect = 2.0, Method: Composition-based stats.
Identities = 58/236 (24%), Positives = 94/236 (39%), Gaps = 45/236 (19%)
Query: 698 SITGSSNDGINSP--QAIRRFSYHELLQATDRFSKNNLLGIGSFGSVYVARL-QDGMEVA 754
S G +++ + SP R S+ + Q+ R S+ LG GS+G V+ R +DG A
Sbjct: 32 SFRGEASETLQSPGYDPSRPESFFQ--QSFQRLSR---LGHGSYGEVFKVRSKEDGRLYA 86
Query: 755 VKVFHQRYERALKSFQDECEVMKRI----------RHRNLVKIISACSNDDFKALIMEYM 804
VK R++ F+ + +++ +H V++ A L E +
Sbjct: 87 VK-------RSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTE-L 138
Query: 805 PNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------ 852
SL+ + L Q + D LAL +LH S ++H V
Sbjct: 139 CGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGR 195
Query: 853 AHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLME 908
+ DF + L +Q YMAPE +QG T DV+S G+ ++E
Sbjct: 196 CKLGDFGLLVELGTAGAGEVQE---GDPRYMAPEL-LQGSYGTAADVFSLGLTILE 247
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 32.0 bits (71), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 11/72 (15%)
Query: 727 RFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYER------ALKSFQDECEVMKRI 779
++ K +G G+FG V+ AR + G +VA+K E+ AL+ E ++++ +
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR----EIKILQLL 74
Query: 780 RHRNLVKIISAC 791
+H N+V +I C
Sbjct: 75 KHENVVNLIEIC 86
>pdb|3P72|A Chain A, Structure Of Platelet Glycoprotein 1b Alpha With A Bound
Peptide Inhibitor
Length = 269
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 53/119 (44%), Gaps = 7/119 (5%)
Query: 480 SGNLTSLRALYLGSNRFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLK---VVIE 536
G L L L L N+ S LP L + DVS N L SL +G L+ + E
Sbjct: 73 DGTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLT---SLPLGALRGLGELQE 128
Query: 537 LNLSRNNLSGDIPITIGGLKNLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNKISGV 595
L L N L P + L+KL LANN+L +GL +L+ L L +N + +
Sbjct: 129 LYLKGNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLLQENSLYTI 187
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 15/120 (12%)
Query: 244 LATNNLVGVVPFTIFNMSTLKKLSLLENTLWGSLP--SRIDLS-------------LPNV 288
L T +L ++P+T L + L + + G+LP +DLS LP +
Sbjct: 43 LYTFSLATLMPYTRLTQLNLDRCELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPAL 102
Query: 289 EFLNLGTNRFSGNIPSSITNASKLTVFQLRGNSFSGFIPNTIGNLRNLEFLNIADNYLTS 348
L++ NR + ++ +L L+GN P + LE L++A+N LT
Sbjct: 103 TVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLTE 162
Score = 30.4 bits (67), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%)
Query: 198 FNNLSGAIPKEIGNLTKLKDIILNDNELRGEIPQEMGNLPYLVRLTLATNNLVGVVPFTI 257
FN L+ + L +L+++ L NEL+ P + P L +L+LA N L + +
Sbjct: 109 FNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLL 168
Query: 258 FNMSTLKKLSLLENTLW 274
+ L L L EN+L+
Sbjct: 169 NGLENLDTLLLQENSLY 185
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 11/72 (15%)
Query: 727 RFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYER------ALKSFQDECEVMKRI 779
++ K +G G+FG V+ AR + G +VA+K E+ AL+ E ++++ +
Sbjct: 18 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR----EIKILQLL 73
Query: 780 RHRNLVKIISAC 791
+H N+V +I C
Sbjct: 74 KHENVVNLIEIC 85
>pdb|1U0N|D Chain D, The Ternary Von Willebrand Factor A1-Glycoprotein Ibalpha-
Botrocetin Complex
Length = 265
Score = 31.6 bits (70), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 53/119 (44%), Gaps = 7/119 (5%)
Query: 480 SGNLTSLRALYLGSNRFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLK---VVIE 536
G L L L L N+ S LP L + DVS N L SL +G L+ + E
Sbjct: 73 DGTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLT---SLPLGALRGLGELQE 128
Query: 537 LNLSRNNLSGDIPITIGGLKNLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNKISGV 595
L L N L P + L+KL LANN+L +GL +L+ L L +N + +
Sbjct: 129 LYLKGNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLLQENSLYTI 187
Score = 31.2 bits (69), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 15/120 (12%)
Query: 244 LATNNLVGVVPFTIFNMSTLKKLSLLENTLWGSLP--SRIDLS-------------LPNV 288
L T +L ++P+T L + L + + G+LP +DLS LP +
Sbjct: 43 LYTFSLATLMPYTRLTQLNLDRCELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPAL 102
Query: 289 EFLNLGTNRFSGNIPSSITNASKLTVFQLRGNSFSGFIPNTIGNLRNLEFLNIADNYLTS 348
L++ NR + ++ +L L+GN P + LE L++A+N LT
Sbjct: 103 TVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLTE 162
Score = 30.4 bits (67), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%)
Query: 198 FNNLSGAIPKEIGNLTKLKDIILNDNELRGEIPQEMGNLPYLVRLTLATNNLVGVVPFTI 257
FN L+ + L +L+++ L NEL+ P + P L +L+LA N L + +
Sbjct: 109 FNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLL 168
Query: 258 FNMSTLKKLSLLENTLW 274
+ L L L EN+L+
Sbjct: 169 NGLENLDTLLLQENSLY 185
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 31.6 bits (70), Expect = 2.5, Method: Composition-based stats.
Identities = 54/242 (22%), Positives = 93/242 (38%), Gaps = 55/242 (22%)
Query: 727 RFSKNNLLGIGSFGSVYVARLQDGMEV-AVKVF--------HQRYERALKSFQDECEVMK 777
R+ + LG G F Y D EV A KV HQ+ + E + K
Sbjct: 43 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQK-----EKMSTEIAIHK 97
Query: 778 RIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMID------ 831
+ + ++V +DDF +++E SL L++ +R + +
Sbjct: 98 SLDNPHVVGFHGFFEDDDFVYVVLEICRRRSL----------LELHKRRKAVTEPEARYF 147
Query: 832 VALALEYLHFGHSTPIIHY------------MVAHISDFSIAKFLNGQDQLSMQTQTL-A 878
+ ++ + + H+ +IH M I DF +A + + + +TL
Sbjct: 148 MRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE---RKKTLCG 204
Query: 879 TIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTD-----EIFI----GELSLSRW 929
T Y+APE + S D++S G +L GK P + E +I E S+ R
Sbjct: 205 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRH 264
Query: 930 VN 931
+N
Sbjct: 265 IN 266
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 31.6 bits (70), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 726 DRFSKNNLLGIGSFGSVYVARL-QDGMEVAVKVFHQ-----RYERALKSFQDECEVMKRI 779
D F ++G G+F V V ++ Q G A+K+ ++ R E + F++E +V+
Sbjct: 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGE--VSCFREERDVLVNG 118
Query: 780 RHRNLVKIISACSNDDFKALIMEYMPNGSL 809
R + ++ A ++++ L+MEY G L
Sbjct: 119 DRRWITQLHFAFQDENYLYLVMEYYVGGDL 148
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 31.2 bits (69), Expect = 3.0, Method: Composition-based stats.
Identities = 56/232 (24%), Positives = 97/232 (41%), Gaps = 38/232 (16%)
Query: 724 ATDRFS---------KNNLLGIGSFGSVYVA-RLQDGMEVAVKVFHQRYERALKSFQDEC 773
+TD FS + ++LG G+ V L E AVK+ ++ E
Sbjct: 2 STDSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREV 61
Query: 774 EVMKRIR-HRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDV 832
E++ + + HRN++++I +D L+ E M GS+ + ++ ++ + ++ DV
Sbjct: 62 EMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV-VVQDV 120
Query: 833 ALALEYLH---FGHS----TPIIHYMVAHISDFSIAKF-------LNGQDQLSMQTQTLA 878
A AL++LH H I+ +S I F LNG + L
Sbjct: 121 ASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLT 180
Query: 879 TIG---YMAPE----YGVQGRV-STRGDVYSYGIMLMETFTGKKPTDEIFIG 922
G YMAPE + + + R D++S G++L +G P F+G
Sbjct: 181 PCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP----FVG 228
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 31.2 bits (69), Expect = 3.0, Method: Composition-based stats.
Identities = 43/205 (20%), Positives = 89/205 (43%), Gaps = 22/205 (10%)
Query: 727 RFSKNNLLGIGSFGSVYVARLQDGME-VAVKV--FHQRYERALKSFQDECEVMKRIRHRN 783
++ K +G G++G+V+ A+ ++ E VA+K E S E ++K ++H+N
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGH 843
+V++ +D L+ E+ + + Y +C D+ + L L+ L F H
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFCDQ---DLKKYFDSCNGDLDPEIVKSFLFQL-LKGLGFCH 118
Query: 844 STPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQG 891
S ++H + ++DF +A+ + + + T+ Y P+
Sbjct: 119 SRNVLHRDLKPQNLLINRNGELKLADFGLARAFG--IPVRCYSAEVVTLWYRPPDVLFGA 176
Query: 892 RV-STRGDVYSYGIMLMETFTGKKP 915
++ ST D++S G + E +P
Sbjct: 177 KLYSTSIDMWSAGCIFAELANAARP 201
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 31.2 bits (69), Expect = 3.0, Method: Composition-based stats.
Identities = 56/232 (24%), Positives = 97/232 (41%), Gaps = 38/232 (16%)
Query: 724 ATDRFS---------KNNLLGIGSFGSVYVA-RLQDGMEVAVKVFHQRYERALKSFQDEC 773
+TD FS + ++LG G+ V L E AVK+ ++ E
Sbjct: 2 STDSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREV 61
Query: 774 EVMKRIR-HRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDV 832
E++ + + HRN++++I +D L+ E M GS+ + ++ ++ + ++ DV
Sbjct: 62 EMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV-VVQDV 120
Query: 833 ALALEYLH---FGHS----TPIIHYMVAHISDFSIAKF-------LNGQDQLSMQTQTLA 878
A AL++LH H I+ +S I F LNG + L
Sbjct: 121 ASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLT 180
Query: 879 TIG---YMAPE----YGVQGRV-STRGDVYSYGIMLMETFTGKKPTDEIFIG 922
G YMAPE + + + R D++S G++L +G P F+G
Sbjct: 181 PCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP----FVG 228
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 31.2 bits (69), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 81/215 (37%), Gaps = 32/215 (14%)
Query: 733 LLGIGSFGSVYVARLQDGMEV-AVKVF--------HQRYERALKSFQDECEVMKRIRHRN 783
LG G F + D EV A K+ HQR + ++ E + + + H++
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM-----EISIHRSLAHQH 102
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGH 843
+V ++DF +++E SL L+ L + + + L +YLH
Sbjct: 103 VVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR 161
Query: 844 STPIIHY------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQG 891
+IH + I DF +A + + + T Y+APE +
Sbjct: 162 ---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE--RKKVLCGTPNYIAPEVLSKK 216
Query: 892 RVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSL 926
S DV+S G ++ GK P + + E L
Sbjct: 217 GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL 251
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 31.2 bits (69), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 81/215 (37%), Gaps = 32/215 (14%)
Query: 733 LLGIGSFGSVYVARLQDGMEV-AVKVF--------HQRYERALKSFQDECEVMKRIRHRN 783
LG G F + D EV A K+ HQR + ++ E + + + H++
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM-----EISIHRSLAHQH 100
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGH 843
+V ++DF +++E SL L+ L + + + L +YLH
Sbjct: 101 VVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR 159
Query: 844 STPIIHY------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQG 891
+IH + I DF +A + + + T Y+APE +
Sbjct: 160 ---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE--RKKVLCGTPNYIAPEVLSKK 214
Query: 892 RVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSL 926
S DV+S G ++ GK P + + E L
Sbjct: 215 GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL 249
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 31.2 bits (69), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 42/207 (20%), Positives = 89/207 (42%), Gaps = 29/207 (14%)
Query: 726 DRFSKNNLLGIGSFGSVYV--ARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRN 783
+ + K + LG G++ +VY ++L D + ++ + E A + E ++K ++H N
Sbjct: 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHAN 61
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGH 843
+V + + L+ EY+ + + Y C +I N+ + + L L + H
Sbjct: 62 IVTLHDIIHTEKSLTLVFEYLDK---DLKQYLDDCG-NIINMHNVKLFLFQLLRGLAYCH 117
Query: 844 STPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQT----LATIGYMAPEY 887
++H + ++DF +A+ S+ T+T + T+ Y P+
Sbjct: 118 RQKVLHRDLKPQNLLINERGELKLADFGLAR------AKSIPTKTYDNEVVTLWYRPPDI 171
Query: 888 GV-QGRVSTRGDVYSYGIMLMETFTGK 913
+ ST+ D++ G + E TG+
Sbjct: 172 LLGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|2O6R|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B61
Length = 177
Score = 31.2 bits (69), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 57/127 (44%), Gaps = 14/127 (11%)
Query: 174 RNMFHGKIPSTLSKCKQLEGLYLRFNNLSGAIPKEIGNLTKLKDIILNDNELRGEIPQEM 233
+++ HG K QL L L N + LTKL + L++N+L+
Sbjct: 41 QSLPHG----VFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVF 96
Query: 234 GNLPYLVRLTLATNNLVGVVPFTIFN-MSTLKKLSLLENTLWGSLPSRIDLSLPNVEFLN 292
L L L L TN L VP IF+ +++L+K+ L N W D S P +++L+
Sbjct: 97 DKLTQLKELALDTNQLKS-VPDGIFDRLTSLQKIWLHTNP-W-------DCSCPRIDYLS 147
Query: 293 LGTNRFS 299
N+ S
Sbjct: 148 RWLNKNS 154
Score = 30.8 bits (68), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 432 FSRLLNLQGLGLAFNKLARSIPDEIC-HLAKLDKLILHGNKFSGAIPSCSGNLTSLRALY 490
F +L L L L+ N++ +S+PD + L KL L LH NK LT L+ L
Sbjct: 48 FDKLTQLTKLSLSQNQI-QSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELA 106
Query: 491 LGSNRFTSA 499
L +N+ S
Sbjct: 107 LDTNQLKSV 115
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 79/205 (38%), Gaps = 19/205 (9%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKSFQD---ECEVMKRIRH 781
+ F LLG G+FG V + + + G A+K+ + A E V++ RH
Sbjct: 151 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 210
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHF 841
L + + D +MEY G L L + R ++ AL+YLH
Sbjct: 211 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLHS 269
Query: 842 GHSTPIIHYMVAH----------ISDFSIAKFLNG-QDQLSMQTQTLATIGYMAPEYGVQ 890
+ + + I+DF + K G +D +M+T T Y+APE
Sbjct: 270 EKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKT-FCGTPEYLAPEVLED 326
Query: 891 GRVSTRGDVYSYGIMLMETFTGKKP 915
D + G+++ E G+ P
Sbjct: 327 NDYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|2R9U|A Chain A, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|B Chain B, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|C Chain C, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|D Chain D, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
Length = 174
Score = 30.8 bits (68), Expect = 3.8, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 10/109 (9%)
Query: 435 LLNLQGLGLAFNKLARSIPDEICHLAKLDKLILHGNKFSGAIPSCSGNLTSLRALYLGSN 494
L+N Q + LA S+P I +L L+ N+ + P +L +L+ LY SN
Sbjct: 16 LVNCQNIRLA------SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSN 67
Query: 495 RFTSALPSTIWN-LKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRN 542
+ T A+P+ +++ L + D++ N L NLK + + L N
Sbjct: 68 KLT-AIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYLYNN 115
Score = 29.6 bits (65), Expect = 8.2, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 429 PVTFSRLLNLQGLGLAFNKLARSIP----DEICHLAKLDKLILHGNKFSGAIPSCSGNLT 484
P F L+NLQ L NKL +IP D++ L +LD L+ N NL
Sbjct: 50 PGVFDHLVNLQQLYFNSNKLT-AIPTGVFDKLTQLTQLD---LNDNHLKSIPRGAFDNLK 105
Query: 485 SLRALYLGSN 494
SL +YL +N
Sbjct: 106 SLTHIYLYNN 115
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 30.8 bits (68), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 79/205 (38%), Gaps = 19/205 (9%)
Query: 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKSFQD---ECEVMKRIRH 781
+ F LLG G+FG V + + + G A+K+ + A E V++ RH
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 207
Query: 782 RNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHF 841
L + + D +MEY G L L + R ++ AL+YLH
Sbjct: 208 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLHS 266
Query: 842 GHSTPIIHYMVAH----------ISDFSIAKFLNG-QDQLSMQTQTLATIGYMAPEYGVQ 890
+ + + I+DF + K G +D +M+T T Y+APE
Sbjct: 267 EKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKT-FCGTPEYLAPEVLED 323
Query: 891 GRVSTRGDVYSYGIMLMETFTGKKP 915
D + G+++ E G+ P
Sbjct: 324 NDYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 30.8 bits (68), Expect = 4.0, Method: Composition-based stats.
Identities = 52/241 (21%), Positives = 90/241 (37%), Gaps = 53/241 (21%)
Query: 727 RFSKNNLLGIGSFGSVYVARLQDGMEV-AVKVF--------HQRYERALKSFQDECEVMK 777
R+ + LG G F Y D EV A KV HQ+ + E + K
Sbjct: 43 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQK-----EKMSTEIAIHK 97
Query: 778 RIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMID------ 831
+ + ++V +DDF +++E SL L++ +R + +
Sbjct: 98 SLDNPHVVGFHGFFEDDDFVYVVLEICRRRSL----------LELHKRRKAVTEPEARYF 147
Query: 832 VALALEYLHFGHSTPIIHY------------MVAHISDFSIAKFLNGQDQLSMQTQTLAT 879
+ ++ + + H+ +IH M I DF +A + + + T
Sbjct: 148 MRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE--RKKDLCGT 205
Query: 880 IGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTD-----EIFI----GELSLSRWV 930
Y+APE + S D++S G +L GK P + E +I E S+ R +
Sbjct: 206 PNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHI 265
Query: 931 N 931
N
Sbjct: 266 N 266
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 30.8 bits (68), Expect = 4.0, Method: Composition-based stats.
Identities = 52/241 (21%), Positives = 90/241 (37%), Gaps = 53/241 (21%)
Query: 727 RFSKNNLLGIGSFGSVYVARLQDGMEV-AVKVF--------HQRYERALKSFQDECEVMK 777
R+ + LG G F Y D EV A KV HQ+ + E + K
Sbjct: 27 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQK-----EKMSTEIAIHK 81
Query: 778 RIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMID------ 831
+ + ++V +DDF +++E SL L++ +R + +
Sbjct: 82 SLDNPHVVGFHGFFEDDDFVYVVLEICRRRSL----------LELHKRRKAVTEPEARYF 131
Query: 832 VALALEYLHFGHSTPIIHY------------MVAHISDFSIAKFLNGQDQLSMQTQTLAT 879
+ ++ + + H+ +IH M I DF +A + + + T
Sbjct: 132 MRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE--RKKDLCGT 189
Query: 880 IGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTD-----EIFI----GELSLSRWV 930
Y+APE + S D++S G +L GK P + E +I E S+ R +
Sbjct: 190 PNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHI 249
Query: 931 N 931
N
Sbjct: 250 N 250
>pdb|1H6U|A Chain A, Internalin H: Crystal Structure Of Fused N-Terminal
Domains
Length = 308
Score = 30.8 bits (68), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 10/71 (14%)
Query: 530 NLKVVIELNLSRN---NLSGDIPITIGGLKNLQKLFLANNRLEGPIPESFSGLSSLEILD 586
NL + EL LS N N+S I GL++++ L L + ++ P +GLS+L++L
Sbjct: 83 NLTKITELELSGNPLKNVSA-----IAGLQSIKTLDLTSTQITDVTP--LAGLSNLQVLY 135
Query: 587 LSKNKISGVIP 597
L N+I+ + P
Sbjct: 136 LDLNQITNISP 146
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 30.4 bits (67), Expect = 4.6, Method: Composition-based stats.
Identities = 52/241 (21%), Positives = 90/241 (37%), Gaps = 53/241 (21%)
Query: 727 RFSKNNLLGIGSFGSVYVARLQDGMEV-AVKVF--------HQRYERALKSFQDECEVMK 777
R+ + LG G F Y D EV A KV HQ+ + E + K
Sbjct: 43 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQK-----EKMSTEIAIHK 97
Query: 778 RIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMID------ 831
+ + ++V +DDF +++E SL L++ +R + +
Sbjct: 98 SLDNPHVVGFHGFFEDDDFVYVVLEICRRRSL----------LELHKRRKAVTEPEARYF 147
Query: 832 VALALEYLHFGHSTPIIHY------------MVAHISDFSIAKFLNGQDQLSMQTQTLAT 879
+ ++ + + H+ +IH M I DF +A + + + T
Sbjct: 148 MRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE--RKKXLCGT 205
Query: 880 IGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTD-----EIFI----GELSLSRWV 930
Y+APE + S D++S G +L GK P + E +I E S+ R +
Sbjct: 206 PNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHI 265
Query: 931 N 931
N
Sbjct: 266 N 266
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 30.4 bits (67), Expect = 5.2, Method: Composition-based stats.
Identities = 58/281 (20%), Positives = 116/281 (41%), Gaps = 55/281 (19%)
Query: 736 IGSFGSVYVARLQDGMEVAVKVFHQRYERA----LKSFQDECEVMKRIRHRN--LVKIIS 789
IGS GS V ++ + + + + E A L S+++E + +++ + ++++
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 790 ACSNDDFKALIMEYMPNGSLE-NRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPII 848
D + ++ME G+++ N +D ++R + ++ LE +H H I+
Sbjct: 96 YEITDQYIYMVMEC---GNIDLNSWLKKKKSIDPWERKSYWKNM---LEAVHTIHQHGIV 149
Query: 849 H-------YMVA----HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTR- 896
H +++ + DF IA + ++ + T+ YM PE ++ S+R
Sbjct: 150 HSDLKPANFLIVDGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPE-AIKDMSSSRE 208
Query: 897 -----------GDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTN 945
DV+S G +L GK P +I I ++S + +ID N
Sbjct: 209 NGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI-INQIS-----------KLHAIIDPN 256
Query: 946 LLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIV 986
E + E+ L +L C P +RI+ E++
Sbjct: 257 ---HEIEFPDIPEKDLQDVLKC---CLKRDPKQRISIPELL 291
>pdb|2XOT|A Chain A, Crystal Structure Of Neuronal Leucine Rich Repeat Protein
Amigo-1
pdb|2XOT|B Chain B, Crystal Structure Of Neuronal Leucine Rich Repeat Protein
Amigo-1
Length = 361
Score = 30.4 bits (67), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 12/113 (10%)
Query: 481 GNLTSLRALYLGSNRFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLS 540
NL+ LRA + P+ + NL +L N + + + NL+ L+LS
Sbjct: 49 NNLSRLRAEWT---------PTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRY---LDLS 96
Query: 541 RNNLSGDIPITIGGLKNLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNKIS 593
N+L L+ L+ L L NN + +F ++ L+ L LS+N+IS
Sbjct: 97 SNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQIS 149
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 30.0 bits (66), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 9/72 (12%)
Query: 721 LLQATDRFSKNNLLGIGSFGSV-YVARLQDGMEVAVKVFHQ--RYERALKSFQDECEVMK 777
L ++ ++S LG GSFG V V ++ G A+K Q RY+ E ++MK
Sbjct: 2 LETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNR------ELDIMK 55
Query: 778 RIRHRNLVKIIS 789
+ H N++K++
Sbjct: 56 VLDHVNIIKLVD 67
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 30.0 bits (66), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 78/206 (37%), Gaps = 32/206 (15%)
Query: 733 LLGIGSFGSVYVARLQDGMEV-AVKVF--------HQRYERALKSFQDECEVMKRIRHRN 783
LG G F + D EV A K+ HQR + ++ E + + + H++
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM-----EISIHRSLAHQH 76
Query: 784 LVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGH 843
+V ++DF +++E SL L+ L + + + L +YLH
Sbjct: 77 VVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLH--- 132
Query: 844 STPIIHY------------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQG 891
+IH + I DF +A + + + T Y+APE +
Sbjct: 133 RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE--RKKVLCGTPNYIAPEVLSKK 190
Query: 892 RVSTRGDVYSYGIMLMETFTGKKPTD 917
S DV+S G ++ GK P +
Sbjct: 191 GHSFEVDVWSIGCIMYTLLVGKPPFE 216
>pdb|4AW4|A Chain A, Engineered Variant Of Listeria Monocytogenes Inlb
Internalin Domain With An Additional Leucine Rich Repeat
Inserted
pdb|4AW4|B Chain B, Engineered Variant Of Listeria Monocytogenes Inlb
Internalin Domain With An Additional Leucine Rich Repeat
Inserted
pdb|4AW4|C Chain C, Engineered Variant Of Listeria Monocytogenes Inlb
Internalin Domain With An Additional Leucine Rich Repeat
Inserted
Length = 311
Score = 30.0 bits (66), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 26/168 (15%)
Query: 435 LLNLQGLGLAFNKLARSIPDEICHLAKLDKLILHGNKFSGAIPSCSGNLTSLRALYLGSN 494
L NL L L+ N++ P I +L + KL L+GNK + P NL +L L+L N
Sbjct: 65 LPNLTSLNLSNNQITDISP--IQYLPNVTKLFLNGNKLTDIKPLA--NLKNLGWLFLDEN 120
Query: 495 RFTSALPSTIWNLKDILFFDVSS-NSLDGPL------SLDIGNLKVVIELNLSRNNLSGD 547
+ L + + + ++G + SL +GN K+ LSR
Sbjct: 121 KVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGNNKITDITVLSR------ 174
Query: 548 IPITIGGLKNLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNKISGV 595
L L L L +N++ +P +GL+ L+ L LSKN IS +
Sbjct: 175 -------LTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL 213
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 30.0 bits (66), Expect = 7.6, Method: Composition-based stats.
Identities = 58/281 (20%), Positives = 116/281 (41%), Gaps = 55/281 (19%)
Query: 736 IGSFGSVYVARLQDGMEVAVKVFHQRYERA----LKSFQDECEVMKRIRHRN--LVKIIS 789
IGS GS V ++ + + + + E A L S+++E + +++ + ++++
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 75
Query: 790 ACSNDDFKALIMEYMPNGSLE-NRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPII 848
D + ++ME G+++ N +D ++R + ++ LE +H H I+
Sbjct: 76 YEITDQYIYMVMEC---GNIDLNSWLKKKKSIDPWERKSYWKNM---LEAVHTIHQHGIV 129
Query: 849 H-------YMVA----HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTR- 896
H +++ + DF IA + ++ + T+ YM PE ++ S+R
Sbjct: 130 HSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE-AIKDMSSSRE 188
Query: 897 -----------GDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTN 945
DV+S G +L GK P +I I ++S + +ID N
Sbjct: 189 NGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI-INQIS-----------KLHAIIDPN 236
Query: 946 LLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIV 986
E + E+ L +L C P +RI+ E++
Sbjct: 237 ---HEIEFPDIPEKDLQDVLKC---CLKRDPKQRISIPELL 271
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 29.6 bits (65), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 86/202 (42%), Gaps = 34/202 (16%)
Query: 734 LGIGSFGSVYVA-RLQDGMEVAVKVFHQRYERAL--KSFQDECEVMKRIRHRNLVKIIS- 789
+G G++GSV A + G +VA+K + ++ + K E ++K ++H N++ ++
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 790 ---ACSNDDFK--ALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHS 844
A S +F L+M +M L+ M F I V L+ L + HS
Sbjct: 110 FTPASSLRNFYDFYLVMPFM-QTDLQK------IMGMEFSEEKIQYLVYQMLKGLKYIHS 162
Query: 845 TPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQG- 891
++H + I DF +A+ + + T + T Y APE +
Sbjct: 163 AGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE-----MTGYVVTRWYRAPEVILSWM 217
Query: 892 RVSTRGDVYSYGIMLMETFTGK 913
+ D++S G ++ E TGK
Sbjct: 218 HYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 29.6 bits (65), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 117/285 (41%), Gaps = 55/285 (19%)
Query: 733 LLGIGSFGSVYVARLQDGMEVAVKVFHQRYERA----LKSFQDECEVMKRIRHRN--LVK 786
L IGS GS V ++ + + + + E A L S+++E + +++ + +++
Sbjct: 14 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIR 73
Query: 787 IISACSNDDFKALIMEYMPNGSLE-NRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHST 845
+ D + ++ME G+++ N +D ++R + ++ LE +H H
Sbjct: 74 LYDYEITDQYIYMVME---CGNIDLNSWLKKKKSIDPWERKSYWKNM---LEAVHTIHQH 127
Query: 846 PIIH-------YMVA----HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVS 894
I+H +++ + DF IA + ++ + T+ YM PE ++ S
Sbjct: 128 GIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE-AIKDMSS 186
Query: 895 TRG------------DVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVI 942
+R DV+S G +L GK P +I I ++S + +I
Sbjct: 187 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI-INQIS-----------KLHAII 234
Query: 943 DTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVT 987
D N E + E+ L +L C P +RI+ E++
Sbjct: 235 DPN---HEIEFPDIPEKDLQDVLKC---CLKRDPKQRISIPELLA 273
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 29.6 bits (65), Expect = 9.9, Method: Composition-based stats.
Identities = 58/281 (20%), Positives = 116/281 (41%), Gaps = 55/281 (19%)
Query: 736 IGSFGSVYVARLQDGMEVAVKVFHQRYERA----LKSFQDECEVMKRIRHRN--LVKIIS 789
IGS GS V ++ + + + + E A L S+++E + +++ + ++++
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 790 ACSNDDFKALIMEYMPNGSLE-NRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPII 848
D + ++ME G+++ N +D ++R + ++ LE +H H I+
Sbjct: 96 YEITDQYIYMVMEC---GNIDLNSWLKKKKSIDPWERKSYWKNM---LEAVHTIHQHGIV 149
Query: 849 H-------YMVA----HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTR- 896
H +++ + DF IA + ++ + T+ YM PE ++ S+R
Sbjct: 150 HSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE-AIKDMSSSRE 208
Query: 897 -----------GDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTN 945
DV+S G +L GK P +I I ++S + +ID N
Sbjct: 209 NGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI-INQIS-----------KLHAIIDPN 256
Query: 946 LLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIV 986
E + E+ L +L C P +RI+ E++
Sbjct: 257 ---HEIEFPDIPEKDLQDVLKC---CLKRDPKQRISIPELL 291
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,371,718
Number of Sequences: 62578
Number of extensions: 1035699
Number of successful extensions: 4787
Number of sequences better than 100.0: 901
Number of HSP's better than 100.0 without gapping: 384
Number of HSP's successfully gapped in prelim test: 517
Number of HSP's that attempted gapping in prelim test: 2569
Number of HSP's gapped (non-prelim): 1551
length of query: 1007
length of database: 14,973,337
effective HSP length: 108
effective length of query: 899
effective length of database: 8,214,913
effective search space: 7385206787
effective search space used: 7385206787
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)