Query 001838
Match_columns 1007
No_of_seqs 913 out of 6192
Neff 9.3
Searched_HMMs 46136
Date Fri Mar 29 10:31:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001838.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001838hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 1E-116 2E-121 1127.7 71.2 911 23-999 27-958 (968)
2 PLN00113 leucine-rich repeat r 100.0 2E-62 4.2E-67 627.5 36.7 519 92-645 69-589 (968)
3 KOG1187 Serine/threonine prote 100.0 2.9E-49 6.4E-54 438.1 23.9 278 712-995 61-355 (361)
4 KOG0192 Tyrosine kinase specif 100.0 2.5E-42 5.5E-47 379.2 21.7 244 731-998 46-309 (362)
5 KOG0197 Tyrosine kinases [Sign 100.0 1.2E-42 2.7E-47 377.8 13.3 242 729-995 209-464 (468)
6 KOG0595 Serine/threonine-prote 100.0 8E-42 1.7E-46 356.6 17.7 191 724-921 8-219 (429)
7 KOG0472 Leucine-rich repeat pr 100.0 1.7E-45 3.6E-50 379.9 -11.9 488 69-593 46-541 (565)
8 KOG0575 Polo-like serine/threo 100.0 1.8E-41 3.9E-46 371.6 18.7 236 726-988 18-269 (592)
9 KOG0581 Mitogen-activated prot 100.0 2.6E-41 5.7E-46 350.5 16.9 245 716-989 76-336 (364)
10 KOG0615 Serine/threonine prote 100.0 2.5E-41 5.3E-46 351.9 13.2 242 725-989 171-438 (475)
11 KOG0472 Leucine-rich repeat pr 100.0 1E-44 2.2E-49 374.1 -13.5 494 88-617 41-541 (565)
12 KOG1026 Nerve growth factor re 100.0 2.3E-41 5E-46 385.3 12.4 246 728-996 488-766 (774)
13 KOG4194 Membrane glycoprotein 100.0 8.2E-41 1.8E-45 359.5 8.1 275 70-347 80-354 (873)
14 KOG4194 Membrane glycoprotein 100.0 7.3E-41 1.6E-45 359.9 7.6 388 71-516 55-447 (873)
15 KOG0196 Tyrosine kinase, EPH ( 100.0 1.2E-40 2.7E-45 369.9 8.9 260 712-994 606-893 (996)
16 KOG0593 Predicted protein kina 100.0 1.6E-39 3.6E-44 324.6 12.2 256 726-988 2-284 (396)
17 KOG0193 Serine/threonine prote 100.0 9.4E-39 2E-43 347.7 14.2 248 726-995 392-656 (678)
18 KOG1095 Protein tyrosine kinas 100.0 1.6E-38 3.4E-43 375.6 16.3 248 728-998 694-967 (1025)
19 KOG0591 NIMA (never in mitosis 100.0 3.1E-39 6.8E-44 319.4 7.9 243 726-990 19-283 (375)
20 KOG4721 Serine/threonine prote 100.0 1E-38 2.2E-43 341.9 10.2 240 712-992 117-368 (904)
21 KOG0194 Protein tyrosine kinas 100.0 5.2E-38 1.1E-42 348.2 13.0 245 728-998 159-426 (474)
22 KOG0661 MAPK related serine/th 100.0 1.9E-38 4.1E-43 336.1 8.0 256 725-988 9-291 (538)
23 KOG0600 Cdc2-related protein k 100.0 2.1E-37 4.5E-42 330.7 14.0 254 725-988 116-400 (560)
24 KOG0598 Ribosomal protein S6 k 100.0 3.5E-37 7.7E-42 319.8 15.0 230 725-980 24-269 (357)
25 KOG0578 p21-activated serine/t 100.0 1.5E-37 3.2E-42 338.2 11.5 238 726-988 273-523 (550)
26 KOG1094 Discoidin domain recep 100.0 1.1E-36 2.4E-41 328.1 16.6 251 726-992 538-804 (807)
27 KOG0597 Serine-threonine prote 100.0 2.4E-37 5.2E-42 331.9 10.8 235 726-988 2-251 (808)
28 KOG0618 Serine/threonine phosp 100.0 2.4E-39 5.1E-44 367.1 -5.0 506 73-614 3-510 (1081)
29 KOG3653 Transforming growth fa 100.0 1E-35 2.2E-40 315.2 22.5 265 728-998 212-509 (534)
30 KOG0659 Cdk activating kinase 100.0 1.6E-36 3.6E-41 298.6 14.3 255 726-988 2-281 (318)
31 KOG0198 MEKK and related serin 100.0 1.3E-36 2.9E-41 323.0 14.3 245 726-991 17-279 (313)
32 cd05102 PTKc_VEGFR3 Catalytic 100.0 9.5E-36 2E-40 335.3 19.7 248 725-994 6-336 (338)
33 KOG4278 Protein tyrosine kinas 100.0 1.3E-36 2.7E-41 328.1 11.3 241 727-992 268-523 (1157)
34 KOG4257 Focal adhesion tyrosin 100.0 2.8E-36 6E-41 326.5 13.8 241 729-994 392-651 (974)
35 KOG0582 Ste20-like serine/thre 100.0 3.3E-35 7.2E-40 309.1 20.5 250 725-988 25-293 (516)
36 KOG0583 Serine/threonine prote 100.0 1.9E-35 4.1E-40 328.5 18.4 238 723-987 14-274 (370)
37 PHA02988 hypothetical protein; 100.0 7.1E-35 1.5E-39 318.8 21.7 248 713-993 12-280 (283)
38 KOG0201 Serine/threonine prote 100.0 1.3E-36 2.8E-41 320.0 7.1 251 726-1002 13-288 (467)
39 KOG0592 3-phosphoinositide-dep 100.0 1.9E-35 4E-40 318.3 15.3 242 722-988 69-338 (604)
40 KOG0663 Protein kinase PITSLRE 100.0 2E-35 4.4E-40 299.4 13.2 256 725-988 75-361 (419)
41 KOG0033 Ca2+/calmodulin-depend 100.0 6.7E-37 1.4E-41 296.7 2.3 240 725-988 10-267 (355)
42 KOG0618 Serine/threonine phosp 100.0 1.7E-37 3.7E-42 352.0 -2.3 484 96-615 2-487 (1081)
43 KOG0660 Mitogen-activated prot 100.0 2.8E-35 6.1E-40 304.3 13.7 260 722-988 18-310 (359)
44 KOG0199 ACK and related non-re 100.0 1.2E-35 2.5E-40 325.7 11.3 237 731-991 115-371 (1039)
45 cd05104 PTKc_Kit Catalytic dom 100.0 1.5E-34 3.3E-39 328.9 19.3 245 725-991 34-373 (375)
46 KOG0616 cAMP-dependent protein 100.0 1.8E-34 3.9E-39 288.4 17.2 224 726-979 44-283 (355)
47 cd05106 PTKc_CSF-1R Catalytic 100.0 2.1E-34 4.6E-39 327.4 19.7 247 725-993 37-373 (374)
48 cd05096 PTKc_DDR1 Catalytic do 100.0 7.3E-34 1.6E-38 315.0 22.2 249 726-990 5-303 (304)
49 KOG0694 Serine/threonine prote 100.0 1.5E-34 3.2E-39 320.7 16.4 230 725-982 367-613 (694)
50 KOG0588 Serine/threonine prote 100.0 6.2E-35 1.3E-39 320.4 13.1 236 726-989 12-264 (786)
51 PF07714 Pkinase_Tyr: Protein 100.0 2.3E-34 4.9E-39 310.9 15.8 237 730-989 3-259 (259)
52 KOG0605 NDR and related serine 100.0 3.5E-34 7.7E-39 309.2 16.9 240 724-987 139-444 (550)
53 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.1E-33 2.3E-38 322.5 21.4 249 724-994 35-399 (400)
54 cd05631 STKc_GRK4 Catalytic do 100.0 7.7E-34 1.7E-38 311.5 19.0 238 728-988 2-261 (285)
55 cd05064 PTKc_EphR_A10 Catalyti 100.0 6.5E-34 1.4E-38 308.9 18.0 243 726-992 5-265 (266)
56 KOG0589 Serine/threonine prote 100.0 1.7E-34 3.7E-39 313.8 12.5 239 725-988 3-258 (426)
57 KOG4279 Serine/threonine prote 100.0 6.9E-35 1.5E-39 318.5 9.3 234 732-988 581-832 (1226)
58 KOG0580 Serine/threonine prote 100.0 2.3E-34 5E-39 279.6 11.8 238 725-990 21-275 (281)
59 cd06649 PKc_MEK2 Catalytic dom 100.0 2.6E-33 5.7E-38 314.0 21.8 255 725-990 4-303 (331)
60 cd07848 STKc_CDKL5 Catalytic d 100.0 1.6E-33 3.5E-38 309.6 19.4 257 726-988 1-284 (287)
61 KOG0611 Predicted serine/threo 100.0 3.4E-34 7.4E-39 295.7 12.8 233 727-988 54-303 (668)
62 KOG2052 Activin A type IB rece 100.0 2.5E-33 5.4E-38 294.8 19.2 255 726-995 211-506 (513)
63 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.5E-33 3.2E-38 304.3 17.4 239 726-989 4-255 (256)
64 KOG1025 Epidermal growth facto 100.0 3.9E-34 8.4E-39 319.1 13.1 243 729-995 699-960 (1177)
65 KOG0444 Cytoskeletal regulator 100.0 4E-36 8.7E-41 324.6 -2.5 363 166-590 8-372 (1255)
66 cd05108 PTKc_EGFR Catalytic do 100.0 1.6E-33 3.5E-38 313.9 17.9 248 726-997 7-273 (316)
67 cd05048 PTKc_Ror Catalytic Dom 100.0 4.4E-33 9.5E-38 305.5 20.9 244 726-992 5-283 (283)
68 cd05093 PTKc_TrkB Catalytic do 100.0 6.7E-33 1.5E-37 304.7 21.4 247 726-995 5-282 (288)
69 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 2.6E-33 5.6E-38 314.6 18.0 239 726-988 1-257 (333)
70 cd05033 PTKc_EphR Catalytic do 100.0 4.3E-33 9.4E-38 302.5 19.2 244 726-992 4-265 (266)
71 PTZ00267 NIMA-related protein 100.0 7.5E-33 1.6E-37 324.5 22.5 239 727-988 68-323 (478)
72 cd07871 STKc_PCTAIRE3 Catalyti 100.0 5.4E-33 1.2E-37 305.3 20.0 256 726-988 5-285 (288)
73 cd07869 STKc_PFTAIRE1 Catalyti 100.0 5.7E-33 1.2E-37 307.6 20.3 258 725-988 4-288 (303)
74 KOG0584 Serine/threonine prote 100.0 6.6E-34 1.4E-38 312.6 12.2 232 731-988 45-296 (632)
75 KOG0658 Glycogen synthase kina 100.0 3.5E-34 7.6E-39 296.7 9.5 250 726-988 24-306 (364)
76 cd05094 PTKc_TrkC Catalytic do 100.0 1.1E-32 2.4E-37 303.4 21.7 247 726-995 5-285 (291)
77 cd05571 STKc_PKB Catalytic dom 100.0 4.4E-33 9.6E-38 311.0 18.7 230 732-988 1-251 (323)
78 cd05612 STKc_PRKX_like Catalyt 100.0 3.7E-33 7.9E-38 307.0 17.7 233 726-988 1-254 (291)
79 cd07859 STKc_TDY_MAPK_plant Ca 100.0 7.6E-33 1.6E-37 312.0 20.4 255 727-988 1-290 (338)
80 KOG1989 ARK protein kinase fam 100.0 3.4E-33 7.3E-38 320.7 17.2 246 726-995 37-314 (738)
81 cd06650 PKc_MEK1 Catalytic dom 100.0 1.4E-32 3.1E-37 308.0 21.7 187 725-918 4-204 (333)
82 cd05049 PTKc_Trk Catalytic dom 100.0 9.8E-33 2.1E-37 302.2 19.8 242 726-990 5-279 (280)
83 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.3E-32 2.9E-37 313.2 21.5 247 725-993 36-400 (401)
84 PTZ00263 protein kinase A cata 100.0 5.6E-33 1.2E-37 310.8 18.1 233 726-988 18-271 (329)
85 KOG0032 Ca2+/calmodulin-depend 100.0 1E-32 2.2E-37 306.1 19.8 239 725-988 34-293 (382)
86 cd05054 PTKc_VEGFR Catalytic d 100.0 8.8E-33 1.9E-37 309.8 19.6 247 726-994 7-335 (337)
87 cd05111 PTK_HER3 Pseudokinase 100.0 2.4E-32 5.3E-37 298.7 22.4 246 726-995 7-271 (279)
88 cd08228 STKc_Nek6 Catalytic do 100.0 3E-32 6.4E-37 296.2 22.8 246 726-993 2-266 (267)
89 cd05148 PTKc_Srm_Brk Catalytic 100.0 4.5E-33 9.7E-38 301.5 16.3 245 723-992 3-261 (261)
90 cd05084 PTKc_Fes Catalytic dom 100.0 1.8E-32 3.9E-37 295.1 20.9 236 732-990 1-251 (252)
91 KOG0574 STE20-like serine/thre 100.0 5.9E-35 1.3E-39 290.5 1.3 237 727-988 34-283 (502)
92 cd05585 STKc_YPK1_like Catalyt 100.0 8.4E-33 1.8E-37 307.3 18.6 228 734-988 1-247 (312)
93 cd05072 PTKc_Lyn Catalytic dom 100.0 1.8E-32 3.8E-37 296.9 20.6 241 726-991 6-260 (261)
94 KOG0599 Phosphorylase kinase g 100.0 1.2E-33 2.6E-38 278.1 10.2 242 725-990 16-285 (411)
95 KOG0444 Cytoskeletal regulator 100.0 5.5E-35 1.2E-39 315.8 0.5 361 142-542 9-372 (1255)
96 cd05595 STKc_PKB_beta Catalyti 100.0 1.4E-32 2.9E-37 306.9 19.6 230 732-988 1-251 (323)
97 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.5E-32 3.3E-37 296.3 19.3 240 726-990 4-256 (256)
98 KOG0596 Dual specificity; seri 100.0 3E-33 6.5E-38 300.9 13.3 242 726-988 361-627 (677)
99 cd05036 PTKc_ALK_LTK Catalytic 100.0 2.4E-32 5.1E-37 298.6 20.2 244 724-990 4-276 (277)
100 KOG0585 Ca2+/calmodulin-depend 100.0 7.9E-33 1.7E-37 292.8 15.6 247 722-991 93-375 (576)
101 cd05599 STKc_NDR_like Catalyti 100.0 7.9E-33 1.7E-37 314.8 17.0 241 726-988 1-296 (364)
102 cd05055 PTKc_PDGFR Catalytic d 100.0 2.9E-32 6.2E-37 301.5 20.9 245 726-992 35-301 (302)
103 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 2.5E-32 5.4E-37 299.5 20.2 256 727-993 4-282 (283)
104 cd05626 STKc_LATS2 Catalytic d 100.0 1.5E-32 3.3E-37 313.8 19.3 241 727-988 2-305 (381)
105 KOG4717 Serine/threonine prote 100.0 6.9E-33 1.5E-37 293.9 14.8 236 726-988 18-270 (864)
106 PTZ00283 serine/threonine prot 100.0 1.6E-32 3.6E-37 321.4 19.7 244 722-988 28-297 (496)
107 cd05628 STKc_NDR1 Catalytic do 100.0 2.4E-32 5.2E-37 310.2 20.4 190 726-919 1-239 (363)
108 cd05062 PTKc_IGF-1R Catalytic 100.0 2.6E-32 5.7E-37 298.3 20.0 245 724-991 4-277 (277)
109 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 3.7E-32 8E-37 298.3 21.2 253 726-993 4-284 (284)
110 PTZ00426 cAMP-dependent protei 100.0 1.5E-32 3.2E-37 307.9 18.4 233 726-988 30-284 (340)
111 cd05090 PTKc_Ror1 Catalytic do 100.0 3.4E-32 7.4E-37 298.4 20.9 243 726-991 5-282 (283)
112 cd05605 STKc_GRK4_like Catalyt 100.0 2.2E-32 4.8E-37 299.9 19.2 239 727-988 1-261 (285)
113 PLN00034 mitogen-activated pro 100.0 1.9E-32 4.2E-37 309.9 19.2 235 727-988 75-328 (353)
114 cd05593 STKc_PKB_gamma Catalyt 100.0 2.3E-32 5E-37 305.6 19.5 230 732-988 1-251 (328)
115 cd05089 PTKc_Tie1 Catalytic do 100.0 1.9E-32 4.1E-37 302.5 18.6 249 726-1000 2-283 (297)
116 cd05109 PTKc_HER2 Catalytic do 100.0 4.7E-32 1E-36 296.6 21.5 249 726-998 7-274 (279)
117 cd05068 PTKc_Frk_like Catalyti 100.0 3.6E-32 7.8E-37 294.4 20.4 242 725-991 5-260 (261)
118 cd05043 PTK_Ryk Pseudokinase d 100.0 4.7E-32 1E-36 296.8 21.5 248 725-995 5-279 (280)
119 cd05053 PTKc_FGFR Catalytic do 100.0 1.1E-32 2.3E-37 304.0 16.4 247 724-993 10-292 (293)
120 PHA03212 serine/threonine kina 100.0 4.5E-32 9.9E-37 309.1 21.9 252 725-988 91-376 (391)
121 cd05601 STKc_CRIK Catalytic do 100.0 5.2E-33 1.1E-37 311.8 13.9 241 726-988 1-263 (330)
122 cd05045 PTKc_RET Catalytic dom 100.0 5.2E-32 1.1E-36 298.0 21.5 245 727-994 1-288 (290)
123 cd05596 STKc_ROCK Catalytic do 100.0 1.1E-32 2.3E-37 313.2 16.4 242 724-988 41-304 (370)
124 cd05052 PTKc_Abl Catalytic dom 100.0 4.6E-32 9.9E-37 293.9 20.6 241 727-992 7-262 (263)
125 KOG0577 Serine/threonine prote 100.0 1.2E-33 2.7E-38 304.1 7.9 233 727-988 27-278 (948)
126 KOG0594 Protein kinase PCTAIRE 100.0 8.4E-33 1.8E-37 287.7 13.7 261 725-992 10-308 (323)
127 cd05097 PTKc_DDR_like Catalyti 100.0 2E-32 4.4E-37 302.0 17.7 249 726-990 5-294 (295)
128 cd06624 STKc_ASK Catalytic dom 100.0 6.5E-32 1.4E-36 293.7 21.4 245 721-988 3-265 (268)
129 cd05098 PTKc_FGFR1 Catalytic d 100.0 3.2E-32 7E-37 302.2 19.1 248 726-996 18-303 (307)
130 KOG2345 Serine/threonine prote 100.0 3.8E-33 8.2E-38 272.2 10.0 250 725-992 20-300 (302)
131 KOG0579 Ste20-like serine/thre 100.0 9.3E-34 2E-38 306.5 6.4 239 727-988 33-289 (1187)
132 PRK13184 pknD serine/threonine 100.0 5.4E-32 1.2E-36 323.5 22.1 252 726-998 2-296 (932)
133 cd05092 PTKc_TrkA Catalytic do 100.0 2.1E-32 4.6E-37 299.4 17.2 242 726-990 5-279 (280)
134 cd05629 STKc_NDR_like_fungal C 100.0 1.6E-32 3.5E-37 313.5 16.9 241 726-988 1-305 (377)
135 cd06646 STKc_MAP4K5 Catalytic 100.0 3E-32 6.6E-37 296.1 18.2 242 726-989 9-266 (267)
136 cd05101 PTKc_FGFR2 Catalytic d 100.0 3.7E-32 8E-37 301.3 18.9 248 725-995 14-299 (304)
137 cd05063 PTKc_EphR_A2 Catalytic 100.0 4.1E-32 8.9E-37 295.2 19.0 244 726-992 5-267 (268)
138 cd05059 PTKc_Tec_like Catalyti 100.0 2.3E-32 5E-37 295.0 16.8 238 727-989 5-255 (256)
139 PTZ00036 glycogen synthase kin 100.0 3.6E-32 7.8E-37 315.0 19.6 253 724-988 64-351 (440)
140 cd05589 STKc_PKN Catalytic dom 100.0 5.4E-32 1.2E-36 302.5 20.4 233 728-988 1-257 (324)
141 cd05051 PTKc_DDR Catalytic dom 100.0 4.6E-32 9.9E-37 299.5 19.5 250 725-990 4-295 (296)
142 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 6.9E-32 1.5E-36 294.1 20.6 227 733-990 2-274 (274)
143 cd05584 STKc_p70S6K Catalytic 100.0 4.5E-32 9.7E-37 302.9 19.5 230 732-988 2-256 (323)
144 cd05103 PTKc_VEGFR2 Catalytic 100.0 4.4E-32 9.5E-37 305.5 19.4 248 725-994 6-341 (343)
145 cd05608 STKc_GRK1 Catalytic do 100.0 7.3E-32 1.6E-36 295.0 20.6 233 734-988 1-257 (280)
146 cd05621 STKc_ROCK2 Catalytic d 100.0 2.6E-32 5.6E-37 309.6 17.5 242 724-988 41-304 (370)
147 cd05065 PTKc_EphR_B Catalytic 100.0 3.8E-32 8.2E-37 295.7 18.1 243 727-992 5-268 (269)
148 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 1.9E-31 4E-36 289.9 23.4 246 726-993 2-266 (267)
149 cd05035 PTKc_Axl_like Catalyti 100.0 1.3E-31 2.8E-36 292.1 22.2 242 728-992 1-272 (273)
150 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.1E-32 2.4E-37 312.1 14.0 239 726-988 1-285 (350)
151 cd05091 PTKc_Ror2 Catalytic do 100.0 2.2E-32 4.8E-37 299.9 16.0 241 727-990 6-281 (283)
152 cd07862 STKc_CDK6 Catalytic do 100.0 7.8E-32 1.7E-36 296.7 20.2 255 726-988 1-287 (290)
153 cd08529 STKc_FA2-like Catalyti 100.0 1.5E-31 3.3E-36 288.6 21.9 237 727-988 1-253 (256)
154 cd05115 PTKc_Zap-70 Catalytic 100.0 6.2E-32 1.3E-36 291.6 18.8 236 733-992 2-255 (257)
155 cd05085 PTKc_Fer Catalytic dom 100.0 6.9E-32 1.5E-36 290.2 19.0 235 732-990 1-249 (250)
156 cd05592 STKc_nPKC_theta_delta 100.0 3.4E-32 7.5E-37 302.7 17.2 229 732-987 1-247 (316)
157 cd05588 STKc_aPKC Catalytic do 100.0 3E-32 6.4E-37 305.0 16.7 236 732-988 1-262 (329)
158 cd05066 PTKc_EphR_A Catalytic 100.0 5.6E-32 1.2E-36 293.9 18.4 244 726-992 4-266 (267)
159 cd05050 PTKc_Musk Catalytic do 100.0 4.2E-32 9E-37 298.5 17.5 244 725-991 4-288 (288)
160 cd08229 STKc_Nek7 Catalytic do 100.0 1.1E-31 2.4E-36 291.6 20.5 246 726-993 2-266 (267)
161 cd05625 STKc_LATS1 Catalytic d 100.0 3.7E-32 8E-37 311.1 17.4 189 727-919 2-251 (382)
162 cd05607 STKc_GRK7 Catalytic do 100.0 1.3E-31 2.8E-36 292.5 20.9 235 734-990 1-252 (277)
163 cd05619 STKc_nPKC_theta Cataly 100.0 1.1E-31 2.4E-36 298.5 20.6 229 732-987 1-247 (316)
164 cd06654 STKc_PAK1 Catalytic do 100.0 1.3E-31 2.8E-36 295.5 21.0 238 726-988 20-270 (296)
165 cd05061 PTKc_InsR Catalytic do 100.0 6.7E-32 1.5E-36 296.7 18.5 246 724-992 4-278 (288)
166 cd05058 PTKc_Met_Ron Catalytic 100.0 7.3E-32 1.6E-36 292.2 18.5 240 732-994 1-261 (262)
167 cd05056 PTKc_FAK Catalytic dom 100.0 8.3E-32 1.8E-36 293.2 19.0 245 726-995 6-268 (270)
168 cd05590 STKc_nPKC_eta Catalyti 100.0 7.4E-32 1.6E-36 300.6 18.9 224 732-982 1-241 (320)
169 cd05032 PTKc_InsR_like Catalyt 100.0 7.1E-32 1.5E-36 294.9 18.3 242 726-990 6-276 (277)
170 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 6.1E-32 1.3E-36 292.4 17.6 240 726-991 6-259 (260)
171 cd05088 PTKc_Tie2 Catalytic do 100.0 5.5E-32 1.2E-36 299.5 17.5 248 726-999 7-287 (303)
172 cd05099 PTKc_FGFR4 Catalytic d 100.0 7.9E-32 1.7E-36 300.0 18.9 250 726-998 12-299 (314)
173 cd05598 STKc_LATS Catalytic do 100.0 2.3E-32 5E-37 312.2 14.9 241 726-988 1-301 (376)
174 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.9E-31 4.1E-36 288.6 21.3 227 732-989 1-261 (262)
175 cd05622 STKc_ROCK1 Catalytic d 100.0 5.8E-32 1.3E-36 307.0 17.9 248 719-989 36-305 (371)
176 cd05591 STKc_nPKC_epsilon Cata 100.0 8.2E-32 1.8E-36 300.6 18.7 230 732-988 1-254 (321)
177 cd05075 PTKc_Axl Catalytic dom 100.0 1E-31 2.3E-36 292.7 18.9 241 729-992 2-271 (272)
178 PTZ00266 NIMA-related protein 100.0 5E-32 1.1E-36 324.8 17.7 243 722-987 9-294 (1021)
179 cd05618 STKc_aPKC_iota Catalyt 100.0 4E-32 8.6E-37 303.8 15.8 236 732-988 1-262 (329)
180 cd05570 STKc_PKC Catalytic dom 100.0 7.6E-32 1.6E-36 300.3 17.7 230 732-988 1-252 (318)
181 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 8.3E-32 1.8E-36 295.5 17.7 260 726-993 4-284 (284)
182 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.6E-31 3.5E-36 296.8 20.2 256 726-988 6-286 (309)
183 cd05095 PTKc_DDR2 Catalytic do 100.0 9.9E-32 2.1E-36 296.7 18.3 250 726-991 5-296 (296)
184 cd05614 STKc_MSK2_N N-terminal 100.0 1E-31 2.3E-36 301.5 18.7 240 727-988 1-267 (332)
185 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 1.6E-31 3.4E-36 290.8 19.2 240 732-990 1-268 (269)
186 cd05632 STKc_GRK5 Catalytic do 100.0 2.1E-31 4.6E-36 292.1 20.5 238 728-988 2-261 (285)
187 cd05594 STKc_PKB_alpha Catalyt 100.0 3.9E-32 8.5E-37 303.8 14.9 231 732-988 1-252 (325)
188 cd06637 STKc_TNIK Catalytic do 100.0 6.5E-32 1.4E-36 294.4 16.3 241 723-988 3-269 (272)
189 cd05071 PTKc_Src Catalytic dom 100.0 1.9E-31 4.2E-36 288.7 19.9 241 726-992 6-260 (262)
190 KOG0607 MAP kinase-interacting 100.0 1.6E-32 3.5E-37 275.9 10.4 260 717-988 74-361 (463)
191 cd05040 PTKc_Ack_like Catalyti 100.0 1.5E-31 3.2E-36 288.9 18.7 236 732-990 1-256 (257)
192 cd06612 STKc_MST1_2 Catalytic 100.0 1.9E-31 4E-36 287.9 19.4 238 726-988 3-253 (256)
193 cd05620 STKc_nPKC_delta Cataly 100.0 6.5E-32 1.4E-36 300.4 16.3 228 732-986 1-246 (316)
194 cd05587 STKc_cPKC Catalytic do 100.0 8.1E-32 1.8E-36 301.1 17.1 229 727-982 1-246 (324)
195 cd06615 PKc_MEK Catalytic doma 100.0 2.9E-31 6.2E-36 294.5 21.3 254 726-990 1-289 (308)
196 PHA03211 serine/threonine kina 100.0 1.9E-31 4.2E-36 307.1 20.5 254 725-988 168-455 (461)
197 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 7.2E-32 1.6E-36 291.4 16.0 227 732-989 1-257 (258)
198 cd05116 PTKc_Syk Catalytic dom 100.0 3.1E-31 6.8E-36 286.3 21.0 234 733-991 2-254 (257)
199 cd05582 STKc_RSK_N N-terminal 100.0 4.2E-32 9.1E-37 302.7 14.4 226 732-984 2-245 (318)
200 cd05616 STKc_cPKC_beta Catalyt 100.0 2.1E-31 4.5E-36 297.7 19.9 229 727-982 1-246 (323)
201 cd06640 STKc_MST4 Catalytic do 100.0 5.1E-31 1.1E-35 288.0 22.6 235 727-988 5-253 (277)
202 cd06645 STKc_MAP4K3 Catalytic 100.0 1.8E-31 4E-36 290.0 18.9 240 726-988 9-265 (267)
203 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 2E-31 4.3E-36 292.5 19.2 251 726-991 5-269 (284)
204 cd06643 STKc_SLK Catalytic dom 100.0 1.6E-31 3.6E-36 292.8 18.5 238 728-988 7-262 (282)
205 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 2.4E-31 5.1E-36 291.8 19.8 257 727-992 5-283 (284)
206 cd06644 STKc_STK10_LOK Catalyt 100.0 3.3E-31 7.2E-36 291.9 21.0 240 726-988 12-269 (292)
207 cd05575 STKc_SGK Catalytic dom 100.0 1.2E-31 2.5E-36 299.6 17.4 225 732-983 1-242 (323)
208 cd06611 STKc_SLK_like Catalyti 100.0 1.3E-31 2.9E-36 293.2 17.5 241 725-988 4-262 (280)
209 cd05057 PTKc_EGFR_like Catalyt 100.0 5.3E-31 1.1E-35 288.3 22.1 246 726-995 7-271 (279)
210 cd05069 PTKc_Yes Catalytic dom 100.0 4.8E-31 1E-35 285.4 21.6 240 726-991 6-259 (260)
211 cd05110 PTKc_HER4 Catalytic do 100.0 3.4E-31 7.4E-36 293.3 20.8 248 726-997 7-273 (303)
212 cd07853 STKc_NLK Catalytic dom 100.0 2E-31 4.3E-36 303.9 19.3 255 727-988 1-288 (372)
213 cd05039 PTKc_Csk_like Catalyti 100.0 6.1E-31 1.3E-35 283.9 21.8 237 726-992 6-256 (256)
214 cd05630 STKc_GRK6 Catalytic do 100.0 3.3E-31 7.1E-36 290.6 19.9 238 728-988 2-261 (285)
215 KOG0200 Fibroblast/platelet-de 100.0 1.2E-31 2.5E-36 319.7 17.6 245 726-993 296-580 (609)
216 KOG0667 Dual-specificity tyros 100.0 7.9E-32 1.7E-36 299.7 14.8 183 727-919 187-391 (586)
217 cd05047 PTKc_Tie Catalytic dom 100.0 2.7E-31 5.9E-36 289.0 18.7 236 732-993 1-269 (270)
218 cd00192 PTKc Catalytic domain 100.0 5.2E-31 1.1E-35 285.3 20.7 236 732-990 1-262 (262)
219 cd05604 STKc_SGK3 Catalytic do 100.0 1.2E-31 2.7E-36 299.8 16.3 231 732-989 1-248 (325)
220 cd05067 PTKc_Lck_Blk Catalytic 100.0 2.1E-31 4.6E-36 288.2 17.7 240 726-991 6-259 (260)
221 PHA03207 serine/threonine kina 100.0 1.4E-31 3E-36 306.7 17.0 254 725-988 91-375 (392)
222 cd05100 PTKc_FGFR3 Catalytic d 100.0 2.4E-31 5.3E-36 298.7 18.6 246 726-994 12-295 (334)
223 cd06656 STKc_PAK3 Catalytic do 100.0 4.1E-31 8.8E-36 291.7 20.1 238 726-988 19-269 (297)
224 cd06625 STKc_MEKK3_like Cataly 100.0 8.7E-31 1.9E-35 283.9 22.3 240 726-988 2-260 (263)
225 cd05597 STKc_DMPK_like Catalyt 100.0 3.1E-31 6.8E-36 297.0 19.3 243 726-988 1-266 (331)
226 cd06619 PKc_MKK5 Catalytic dom 100.0 6.6E-31 1.4E-35 287.4 21.3 238 726-989 1-254 (279)
227 cd06613 STKc_MAP4K3_like Catal 100.0 7.9E-31 1.7E-35 284.1 21.7 243 725-988 2-260 (262)
228 cd05627 STKc_NDR2 Catalytic do 100.0 1.2E-31 2.7E-36 304.2 15.9 190 726-919 1-239 (360)
229 PTZ00284 protein kinase; Provi 100.0 7.7E-31 1.7E-35 307.7 23.0 260 719-988 122-438 (467)
230 cd05041 PTKc_Fes_like Catalyti 100.0 2.9E-31 6.4E-36 285.5 18.0 236 732-990 1-250 (251)
231 cd05112 PTKc_Itk Catalytic dom 100.0 5.3E-31 1.1E-35 284.4 20.0 239 726-989 4-255 (256)
232 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 3.7E-31 8E-36 290.7 19.0 240 726-988 1-262 (286)
233 cd05617 STKc_aPKC_zeta Catalyt 100.0 2.1E-31 4.6E-36 297.8 17.4 231 732-983 1-249 (327)
234 cd06638 STKc_myosinIIIA Cataly 100.0 3.8E-31 8.3E-36 290.6 18.9 251 715-989 7-284 (286)
235 cd06642 STKc_STK25-YSK1 Cataly 100.0 2.6E-31 5.7E-36 290.3 17.4 235 727-988 5-253 (277)
236 cd06655 STKc_PAK2 Catalytic do 100.0 4.7E-31 1E-35 290.9 19.5 238 726-988 19-269 (296)
237 cd06631 STKc_YSK4 Catalytic do 100.0 9.2E-31 2E-35 284.1 21.4 239 727-987 1-261 (265)
238 cd08221 STKc_Nek9 Catalytic do 100.0 1.2E-30 2.6E-35 281.7 22.1 238 727-989 1-254 (256)
239 cd05060 PTKc_Syk_like Catalyti 100.0 8.4E-31 1.8E-35 283.0 20.9 237 732-993 1-256 (257)
240 cd07876 STKc_JNK2 Catalytic do 100.0 7.9E-31 1.7E-35 297.6 21.7 255 724-989 19-316 (359)
241 cd05044 PTKc_c-ros Catalytic d 100.0 2.9E-31 6.2E-36 288.8 17.1 237 732-991 1-269 (269)
242 cd05602 STKc_SGK1 Catalytic do 100.0 3.1E-31 6.6E-36 296.6 17.7 230 732-988 1-247 (325)
243 cd05624 STKc_MRCK_beta Catalyt 100.0 2.8E-31 6.2E-36 297.4 17.5 243 726-988 1-266 (331)
244 cd07873 STKc_PCTAIRE1 Catalyti 100.0 4E-31 8.8E-36 292.5 18.5 255 726-988 6-286 (301)
245 cd05042 PTKc_Aatyk Catalytic d 100.0 7.1E-31 1.5E-35 285.7 19.9 239 733-990 2-268 (269)
246 PHA03209 serine/threonine kina 100.0 4.4E-31 9.6E-36 298.7 18.9 180 724-916 64-256 (357)
247 cd05615 STKc_cPKC_alpha Cataly 100.0 5.9E-31 1.3E-35 293.7 19.6 229 727-982 1-246 (323)
248 cd05082 PTKc_Csk Catalytic dom 100.0 1E-30 2.3E-35 282.1 20.8 236 726-992 6-256 (256)
249 cd05623 STKc_MRCK_alpha Cataly 100.0 4.6E-31 1E-35 295.9 18.6 243 726-988 1-266 (332)
250 cd06609 STKc_MST3_like Catalyt 100.0 1.2E-30 2.5E-35 284.8 21.3 237 726-988 1-251 (274)
251 cd05034 PTKc_Src_like Catalyti 100.0 4.2E-31 9.1E-36 286.1 17.6 242 725-991 5-260 (261)
252 cd05073 PTKc_Hck Catalytic dom 100.0 1.3E-30 2.8E-35 282.0 21.4 241 725-991 5-259 (260)
253 cd08219 STKc_Nek3 Catalytic do 100.0 4.1E-31 8.8E-36 285.1 17.3 237 727-988 1-252 (255)
254 cd05603 STKc_SGK2 Catalytic do 100.0 4.2E-31 9.2E-36 295.0 17.8 225 732-983 1-242 (321)
255 cd07874 STKc_JNK3 Catalytic do 100.0 4.4E-31 9.6E-36 299.3 17.9 255 723-988 14-311 (355)
256 cd07878 STKc_p38beta_MAPK11 Ca 100.0 6.9E-31 1.5E-35 296.3 19.3 255 722-988 11-298 (343)
257 PF00069 Pkinase: Protein kina 100.0 4.9E-31 1.1E-35 285.3 17.3 241 728-988 1-257 (260)
258 cd07868 STKc_CDK8 Catalytic do 100.0 1.7E-30 3.8E-35 289.8 22.1 182 731-918 6-218 (317)
259 KOG0610 Putative serine/threon 100.0 8E-31 1.7E-35 274.2 17.8 240 727-988 78-392 (459)
260 cd08227 PK_STRAD_alpha Pseudok 100.0 1.2E-30 2.6E-35 292.2 20.2 255 730-988 2-307 (327)
261 cd06628 STKc_MAPKKK_Byr2_like 100.0 1.6E-30 3.4E-35 282.6 20.5 238 727-988 1-264 (267)
262 cd08528 STKc_Nek10 Catalytic d 100.0 1.6E-30 3.4E-35 282.9 20.5 240 727-990 1-268 (269)
263 cd06651 STKc_MEKK3 Catalytic d 100.0 3.3E-30 7.2E-35 279.8 22.7 239 726-988 2-261 (266)
264 cd07863 STKc_CDK4 Catalytic do 100.0 7.3E-31 1.6E-35 288.7 17.7 254 727-988 1-285 (288)
265 cd07861 STKc_CDK1_euk Catalyti 100.0 2E-30 4.4E-35 284.7 21.1 255 727-988 1-282 (285)
266 cd06632 STKc_MEKK1_plant Catal 100.0 1.9E-30 4.1E-35 280.3 20.3 236 727-988 1-255 (258)
267 cd07839 STKc_CDK5 Catalytic do 100.0 5.9E-31 1.3E-35 288.7 16.5 256 727-988 1-281 (284)
268 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.5E-30 3.2E-35 285.9 19.7 256 726-988 1-283 (286)
269 cd06647 STKc_PAK_I Catalytic d 100.0 1.4E-30 3E-35 286.8 19.5 238 726-988 19-269 (293)
270 cd07875 STKc_JNK1 Catalytic do 100.0 2.1E-30 4.6E-35 294.6 21.5 254 724-988 22-318 (364)
271 cd08218 STKc_Nek1 Catalytic do 100.0 1.2E-30 2.7E-35 281.5 18.6 237 727-988 1-253 (256)
272 cd06639 STKc_myosinIIIB Cataly 100.0 1.4E-30 3E-35 286.9 19.1 249 716-988 12-287 (291)
273 cd08217 STKc_Nek2 Catalytic do 100.0 5E-30 1.1E-34 278.1 22.7 240 727-988 1-262 (265)
274 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.8E-30 3.9E-35 280.7 19.1 226 732-990 1-259 (259)
275 cd08220 STKc_Nek8 Catalytic do 100.0 1.3E-30 2.8E-35 281.3 17.9 236 727-988 1-253 (256)
276 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 7.2E-30 1.6E-34 280.5 23.8 245 726-989 1-267 (287)
277 cd06605 PKc_MAPKK Catalytic do 100.0 1.6E-30 3.6E-35 282.1 18.5 242 726-988 1-257 (265)
278 cd06629 STKc_MAPKKK_Bck1_like 100.0 3.1E-30 6.7E-35 281.2 20.7 243 727-988 2-269 (272)
279 cd05086 PTKc_Aatyk2 Catalytic 100.0 2.3E-30 4.9E-35 281.4 19.5 239 733-990 2-267 (268)
280 cd08223 STKc_Nek4 Catalytic do 100.0 2.5E-30 5.3E-35 279.3 19.6 237 727-988 1-254 (257)
281 cd06658 STKc_PAK5 Catalytic do 100.0 9E-31 1.9E-35 288.1 16.3 236 728-988 24-272 (292)
282 cd06636 STKc_MAP4K4_6 Catalyti 100.0 2.1E-30 4.7E-35 284.0 19.1 248 716-988 6-279 (282)
283 cd05046 PTK_CCK4 Pseudokinase 100.0 1.3E-30 2.9E-35 284.5 17.3 242 726-990 5-274 (275)
284 cd06610 STKc_OSR1_SPAK Catalyt 100.0 2.8E-30 6E-35 280.6 19.6 245 726-988 1-264 (267)
285 cd07846 STKc_CDKL2_3 Catalytic 100.0 1.3E-30 2.9E-35 286.3 16.9 256 726-988 1-283 (286)
286 KOG0586 Serine/threonine prote 100.0 8.5E-31 1.9E-35 288.0 15.1 237 724-988 54-306 (596)
287 cd06630 STKc_MEKK1 Catalytic d 100.0 4.7E-30 1E-34 279.1 20.8 242 727-988 1-264 (268)
288 cd05609 STKc_MAST Catalytic do 100.0 4.2E-30 9.2E-35 284.9 20.7 243 726-990 1-272 (305)
289 cd07867 STKc_CDC2L6 Catalytic 100.0 6.6E-30 1.4E-34 285.3 22.1 182 731-918 6-218 (317)
290 cd06641 STKc_MST3 Catalytic do 100.0 1.4E-29 3E-34 276.7 24.2 234 728-988 6-253 (277)
291 cd07870 STKc_PFTAIRE2 Catalyti 100.0 3.7E-30 8.1E-35 283.4 19.9 258 724-987 3-287 (291)
292 smart00219 TyrKc Tyrosine kina 100.0 5.2E-30 1.1E-34 276.8 20.6 237 729-989 2-258 (258)
293 cd06652 STKc_MEKK2 Catalytic d 100.0 5.4E-30 1.2E-34 278.0 20.8 239 726-988 2-261 (265)
294 cd06607 STKc_TAO Catalytic dom 100.0 4.4E-30 9.5E-35 285.1 20.3 234 726-988 15-267 (307)
295 KOG4250 TANK binding protein k 100.0 2.4E-31 5.3E-36 295.9 10.0 184 730-919 17-227 (732)
296 cd05074 PTKc_Tyro3 Catalytic d 100.0 2.7E-30 5.9E-35 281.8 17.7 242 728-992 1-272 (273)
297 cd06659 STKc_PAK6 Catalytic do 100.0 1.7E-30 3.6E-35 286.7 16.1 235 729-988 24-271 (297)
298 cd07844 STKc_PCTAIRE_like Cata 100.0 6.5E-30 1.4E-34 281.6 20.7 257 725-987 4-287 (291)
299 cd05083 PTKc_Chk Catalytic dom 100.0 2.7E-30 5.9E-35 278.5 16.7 234 726-991 6-253 (254)
300 cd06617 PKc_MKK3_6 Catalytic d 100.0 7.5E-30 1.6E-34 279.9 20.4 238 726-988 1-261 (283)
301 cd06608 STKc_myosinIII_like Ca 100.0 4.7E-30 1E-34 280.1 18.4 242 723-988 3-272 (275)
302 cd07832 STKc_CCRK Catalytic do 100.0 1.2E-29 2.6E-34 278.7 21.6 255 727-988 1-282 (286)
303 cd07833 STKc_CDKL Catalytic do 100.0 5.3E-30 1.1E-34 281.8 18.5 257 726-988 1-285 (288)
304 cd05586 STKc_Sck1_like Catalyt 100.0 1.8E-30 3.8E-35 291.2 15.0 228 734-987 1-252 (330)
305 cd07860 STKc_CDK2_3 Catalytic 100.0 6.2E-30 1.3E-34 280.6 18.9 255 727-988 1-281 (284)
306 cd06623 PKc_MAPKK_plant_like C 100.0 2.1E-29 4.5E-34 273.3 22.1 239 726-988 1-256 (264)
307 cd08225 STKc_Nek5 Catalytic do 100.0 3.9E-30 8.5E-35 277.8 16.2 237 727-988 1-254 (257)
308 cd06626 STKc_MEKK4 Catalytic d 100.0 1.1E-29 2.4E-34 275.4 19.8 240 727-987 1-260 (264)
309 cd06614 STKc_PAK Catalytic dom 100.0 1.4E-29 3E-34 278.2 20.7 243 723-989 16-271 (286)
310 KOG0604 MAP kinase-activated p 100.0 7.2E-31 1.6E-35 262.4 9.2 240 724-988 59-322 (400)
311 cd06635 STKc_TAO1 Catalytic do 100.0 1.8E-29 3.8E-34 281.4 21.6 233 728-989 27-278 (317)
312 cd06917 STKc_NAK1_like Catalyt 100.0 9.1E-30 2E-34 278.2 18.9 236 727-988 2-255 (277)
313 cd07841 STKc_CDK7 Catalytic do 100.0 1E-29 2.3E-34 280.9 19.6 254 727-988 1-282 (298)
314 cd06648 STKc_PAK_II Catalytic 100.0 1.1E-29 2.3E-34 278.7 19.2 237 727-988 20-269 (285)
315 cd07831 STKc_MOK Catalytic dom 100.0 1.8E-29 3.8E-34 276.8 20.8 252 728-988 1-279 (282)
316 PHA03390 pk1 serine/threonine- 100.0 2.3E-29 4.9E-34 273.2 21.4 238 718-987 6-261 (267)
317 cd07835 STKc_CDK1_like Catalyt 100.0 1.1E-29 2.4E-34 278.5 18.6 254 728-988 1-280 (283)
318 cd06616 PKc_MKK4 Catalytic dom 100.0 1.1E-29 2.3E-34 279.3 17.9 241 727-988 5-267 (288)
319 cd07849 STKc_ERK1_2_like Catal 100.0 1.3E-29 2.9E-34 284.9 18.9 256 725-988 4-292 (336)
320 cd05122 PKc_STE Catalytic doma 100.0 3.2E-29 6.9E-34 269.5 20.9 238 727-988 1-251 (253)
321 KOG4645 MAPKKK (MAP kinase kin 100.0 1.1E-31 2.4E-36 314.4 1.7 242 724-988 1233-1494(1509)
322 cd05580 STKc_PKA Catalytic dom 100.0 2.3E-29 5E-34 276.9 20.0 233 726-988 1-254 (290)
323 cd07852 STKc_MAPK15 Catalytic 100.0 1.5E-29 3.2E-34 284.8 18.7 258 724-988 5-295 (337)
324 cd07842 STKc_CDK8_like Catalyt 100.0 3.6E-29 7.9E-34 279.2 21.4 258 727-988 1-313 (316)
325 cd07836 STKc_Pho85 Catalytic d 100.0 3.9E-29 8.4E-34 274.4 21.1 254 727-987 1-280 (284)
326 cd07865 STKc_CDK9 Catalytic do 100.0 3.2E-29 6.8E-34 278.8 20.2 260 725-988 11-307 (310)
327 cd05633 STKc_GRK3 Catalytic do 100.0 4.4E-29 9.5E-34 272.8 20.9 230 733-988 1-255 (279)
328 KOG1024 Receptor-like protein 100.0 5.1E-30 1.1E-34 264.5 12.5 257 720-999 278-562 (563)
329 cd07843 STKc_CDC2L1 Catalytic 100.0 2.6E-29 5.6E-34 277.0 18.9 256 726-988 5-290 (293)
330 cd06606 STKc_MAPKKK Catalytic 100.0 6.1E-29 1.3E-33 268.5 21.3 240 727-988 1-257 (260)
331 PLN00009 cyclin-dependent kina 100.0 3.1E-29 6.7E-34 276.6 19.2 256 726-988 2-284 (294)
332 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 3.8E-29 8.2E-34 279.7 19.9 257 720-988 4-288 (328)
333 cd07837 STKc_CdkB_plant Cataly 100.0 3.6E-29 7.7E-34 276.3 19.2 256 726-988 1-291 (295)
334 cd07855 STKc_ERK5 Catalytic do 100.0 1.6E-29 3.6E-34 283.9 16.8 258 725-989 4-295 (334)
335 cd05578 STKc_Yank1 Catalytic d 100.0 9.9E-30 2.1E-34 274.8 14.3 235 727-986 1-253 (258)
336 cd05574 STKc_phototropin_like 100.0 4.2E-29 9E-34 278.6 19.6 240 726-987 1-288 (316)
337 cd07845 STKc_CDK10 Catalytic d 100.0 3.1E-29 6.6E-34 278.6 18.3 257 725-988 6-290 (309)
338 cd06618 PKc_MKK7 Catalytic dom 100.0 3.9E-29 8.4E-34 276.0 19.0 241 726-989 15-274 (296)
339 cd06657 STKc_PAK4 Catalytic do 100.0 2.8E-29 6E-34 276.1 17.7 233 731-988 25-270 (292)
340 cd07840 STKc_CDK9_like Catalyt 100.0 6.1E-29 1.3E-33 273.2 20.2 255 728-988 1-284 (287)
341 cd07850 STKc_JNK Catalytic dom 100.0 4.9E-29 1.1E-33 282.2 19.9 254 724-988 14-311 (353)
342 cd07858 STKc_TEY_MAPK_plant Ca 100.0 2.8E-29 6E-34 282.3 17.7 263 725-995 4-300 (337)
343 cd05611 STKc_Rim15_like Cataly 100.0 7E-29 1.5E-33 268.5 19.8 231 732-989 2-249 (260)
344 cd06634 STKc_TAO2 Catalytic do 100.0 7.9E-29 1.7E-33 275.0 20.2 236 726-990 15-269 (308)
345 KOG0986 G protein-coupled rece 100.0 1.2E-29 2.6E-34 266.9 12.6 236 725-983 184-436 (591)
346 KOG0690 Serine/threonine prote 100.0 4.4E-30 9.5E-35 258.6 8.9 237 725-988 167-424 (516)
347 cd05577 STKc_GRK Catalytic dom 100.0 5.7E-29 1.2E-33 271.9 18.6 231 734-987 1-253 (277)
348 cd07864 STKc_CDK12 Catalytic d 100.0 4.2E-29 9.2E-34 276.7 17.6 259 723-988 4-299 (302)
349 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.2E-28 2.6E-33 277.6 21.2 256 721-988 10-298 (343)
350 KOG1151 Tousled-like protein k 100.0 1.9E-30 4.2E-35 270.6 6.0 245 726-988 463-741 (775)
351 cd08216 PK_STRAD Pseudokinase 100.0 6.9E-29 1.5E-33 276.6 18.5 252 731-989 7-296 (314)
352 cd08530 STKc_CNK2-like Catalyt 100.0 5.5E-29 1.2E-33 268.5 17.2 235 727-988 1-253 (256)
353 cd07879 STKc_p38delta_MAPK13 C 100.0 7.4E-29 1.6E-33 279.3 18.8 257 725-994 14-305 (342)
354 cd07877 STKc_p38alpha_MAPK14 C 100.0 1.2E-28 2.5E-33 278.0 20.2 261 716-988 7-300 (345)
355 cd08226 PK_STRAD_beta Pseudoki 100.0 1.5E-28 3.2E-33 275.4 20.8 259 732-994 4-316 (328)
356 KOG0983 Mitogen-activated prot 100.0 1.1E-29 2.4E-34 250.6 10.0 236 730-988 96-349 (391)
357 cd08215 STKc_Nek Catalytic dom 100.0 1.3E-28 2.9E-33 265.7 19.5 237 727-988 1-255 (258)
358 cd05572 STKc_cGK_PKG Catalytic 100.0 2.3E-28 5E-33 264.8 21.2 230 734-987 1-251 (262)
359 PHA03210 serine/threonine kina 100.0 8.3E-29 1.8E-33 291.2 19.1 260 724-988 146-454 (501)
360 cd07854 STKc_MAPK4_6 Catalytic 100.0 5.9E-29 1.3E-33 280.1 17.1 256 726-988 5-300 (342)
361 cd07838 STKc_CDK4_6_like Catal 100.0 2.2E-28 4.8E-33 268.7 21.1 253 728-988 1-284 (287)
362 cd06633 STKc_TAO3 Catalytic do 100.0 2.8E-28 6.1E-33 271.1 22.0 232 728-988 23-273 (313)
363 cd07834 STKc_MAPK Catalytic do 100.0 8.4E-29 1.8E-33 277.9 17.9 262 727-995 1-298 (330)
364 KOG0666 Cyclin C-dependent kin 100.0 4E-30 8.7E-35 258.0 6.3 191 724-918 22-242 (438)
365 cd06627 STKc_Cdc7_like Catalyt 100.0 3E-28 6.6E-33 262.4 21.5 235 727-987 1-250 (254)
366 cd06653 STKc_MEKK3_like_1 Cata 100.0 2.8E-28 6E-33 264.4 21.2 239 726-988 2-261 (264)
367 cd05118 STKc_CMGC Catalytic do 100.0 2.2E-28 4.7E-33 268.2 20.5 254 728-988 1-280 (283)
368 cd05606 STKc_beta_ARK Catalyti 100.0 3.1E-28 6.7E-33 266.1 21.5 230 733-988 1-255 (278)
369 cd05579 STKc_MAST_like Catalyt 100.0 7.3E-29 1.6E-33 269.0 16.2 234 734-990 1-256 (265)
370 KOG4236 Serine/threonine prote 100.0 4.9E-30 1.1E-34 273.0 6.6 232 731-988 569-819 (888)
371 cd07851 STKc_p38 Catalytic dom 100.0 6.7E-29 1.5E-33 279.8 15.9 253 724-988 13-298 (343)
372 cd08222 STKc_Nek11 Catalytic d 100.0 6.4E-29 1.4E-33 268.8 15.0 237 727-988 1-257 (260)
373 PTZ00024 cyclin-dependent prot 100.0 2.1E-28 4.6E-33 275.1 19.2 257 726-988 8-313 (335)
374 cd07830 STKc_MAK_like Catalyti 100.0 1.9E-28 4.2E-33 268.6 18.1 252 728-988 1-280 (283)
375 KOG0671 LAMMER dual specificit 100.0 3E-29 6.5E-34 260.1 10.1 263 714-988 79-406 (415)
376 cd07866 STKc_BUR1 Catalytic do 100.0 1.8E-28 3.9E-33 272.9 17.1 259 725-988 7-308 (311)
377 KOG1035 eIF-2alpha kinase GCN2 100.0 4.3E-29 9.4E-34 291.7 12.2 241 725-987 478-870 (1351)
378 cd05583 STKc_MSK_N N-terminal 100.0 1.7E-28 3.7E-33 269.8 16.4 243 727-991 1-266 (288)
379 PHA02882 putative serine/threo 100.0 4E-28 8.6E-33 267.3 18.3 246 726-989 12-293 (294)
380 cd05613 STKc_MSK1_N N-terminal 100.0 8.1E-28 1.8E-32 264.7 20.1 240 727-988 1-268 (290)
381 KOG0587 Traf2- and Nck-interac 100.0 2E-28 4.4E-33 277.6 15.3 249 716-988 9-282 (953)
382 cd07857 STKc_MPK1 Catalytic do 100.0 1E-27 2.3E-32 269.0 20.7 256 727-988 1-292 (332)
383 cd05581 STKc_PDK1 Catalytic do 100.0 2.1E-28 4.6E-33 267.8 14.5 237 726-987 1-276 (280)
384 cd05610 STKc_MASTL Catalytic d 100.0 9.3E-28 2E-32 291.0 20.6 134 725-862 3-152 (669)
385 cd07829 STKc_CDK_like Catalyti 100.0 5.2E-28 1.1E-32 265.1 16.0 253 728-988 1-279 (282)
386 KOG0696 Serine/threonine prote 99.9 9.3E-29 2E-33 256.2 6.0 236 718-981 342-594 (683)
387 KOG0668 Casein kinase II, alph 99.9 4.8E-28 1E-32 232.9 10.1 252 724-988 36-322 (338)
388 KOG1006 Mitogen-activated prot 99.9 1.2E-29 2.5E-34 249.6 -1.0 246 713-988 58-327 (361)
389 KOG0662 Cyclin-dependent kinas 99.9 5.8E-28 1.3E-32 223.6 10.1 257 726-988 2-283 (292)
390 KOG0612 Rho-associated, coiled 99.9 1.4E-28 3.1E-33 285.0 7.2 247 719-988 68-338 (1317)
391 KOG0603 Ribosomal protein S6 k 99.9 9.6E-28 2.1E-32 265.6 11.8 228 725-988 321-563 (612)
392 cd05123 STKc_AGC Catalytic dom 99.9 4.4E-27 9.5E-32 252.8 16.1 224 734-984 1-240 (250)
393 KOG0669 Cyclin T-dependent kin 99.9 9.7E-29 2.1E-33 241.0 0.1 254 726-988 17-315 (376)
394 cd05576 STKc_RPK118_like Catal 99.9 1E-26 2.2E-31 247.6 14.8 209 737-984 4-225 (237)
395 KOG4237 Extracellular matrix p 99.9 2.1E-28 4.6E-33 253.7 1.1 290 69-376 68-359 (498)
396 PLN03225 Serine/threonine-prot 99.9 2.6E-26 5.7E-31 271.0 17.8 248 724-988 130-450 (566)
397 PLN03224 probable serine/threo 99.9 4.1E-26 9E-31 261.9 16.9 246 724-988 143-500 (507)
398 KOG0695 Serine/threonine prote 99.9 1E-26 2.3E-31 234.9 10.1 236 725-981 249-503 (593)
399 KOG1027 Serine/threonine prote 99.9 3E-27 6.5E-32 266.9 6.8 233 728-988 511-767 (903)
400 smart00220 S_TKc Serine/Threon 99.9 1.8E-25 4E-30 238.6 17.7 226 738-987 1-240 (244)
401 KOG4237 Extracellular matrix p 99.9 1.9E-27 4.1E-32 246.7 0.8 435 79-614 57-498 (498)
402 KOG0614 cGMP-dependent protein 99.9 9E-27 2E-31 247.8 3.4 236 727-988 421-677 (732)
403 KOG1290 Serine/threonine prote 99.9 7.4E-25 1.6E-29 233.2 17.0 122 725-850 77-212 (590)
404 KOG0984 Mitogen-activated prot 99.9 1.9E-25 4.1E-30 212.3 9.3 189 726-920 46-256 (282)
405 KOG0664 Nemo-like MAPK-related 99.9 2.3E-26 5E-31 226.6 0.4 259 729-995 56-350 (449)
406 KOG0576 Mitogen-activated prot 99.9 9.1E-26 2E-30 248.2 0.4 243 724-988 13-271 (829)
407 KOG1167 Serine/threonine prote 99.9 1.4E-24 3E-29 229.0 8.6 257 723-988 33-381 (418)
408 KOG0665 Jun-N-terminal kinase 99.9 1.4E-24 2.9E-29 220.4 7.8 249 725-988 16-310 (369)
409 KOG0608 Warts/lats-like serine 99.9 3.6E-24 7.9E-29 233.1 11.5 211 716-930 616-887 (1034)
410 PLN03210 Resistant to P. syrin 99.9 1.1E-22 2.3E-27 260.9 24.4 325 155-542 579-903 (1153)
411 KOG1152 Signal transduction se 99.9 2.5E-24 5.3E-29 233.0 7.1 185 726-918 561-771 (772)
412 KOG1345 Serine/threonine kinas 99.9 3.5E-24 7.6E-29 211.7 7.2 244 725-992 23-288 (378)
413 cd00180 PKc Catalytic domain o 99.9 2E-22 4.4E-27 209.8 20.1 198 734-988 1-214 (215)
414 PLN03210 Resistant to P. syrin 99.9 3.5E-22 7.5E-27 256.2 26.4 312 215-590 591-903 (1153)
415 KOG0670 U4/U6-associated splic 99.9 1.2E-24 2.6E-29 232.4 2.5 266 710-988 418-746 (752)
416 smart00221 STYKc Protein kinas 99.9 2.6E-22 5.5E-27 211.7 18.4 187 728-918 1-202 (225)
417 PRK15387 E3 ubiquitin-protein 99.9 2.3E-22 5E-27 238.4 19.1 154 70-251 203-356 (788)
418 PRK15387 E3 ubiquitin-protein 99.9 1.9E-22 4E-27 239.2 15.9 162 412-622 302-463 (788)
419 PRK15370 E3 ubiquitin-protein 99.9 1.5E-21 3.3E-26 233.4 19.9 271 23-350 61-383 (754)
420 KOG0195 Integrin-linked kinase 99.9 2.9E-23 6.3E-28 204.8 4.3 241 731-993 195-447 (448)
421 smart00750 KIND kinase non-cat 99.9 3.8E-21 8.1E-26 194.6 14.6 168 807-996 1-173 (176)
422 PRK15370 E3 ubiquitin-protein 99.8 5.6E-21 1.2E-25 228.6 11.4 234 56-323 168-401 (754)
423 PLN00181 protein SPA1-RELATED; 99.8 3.6E-21 7.9E-26 239.8 9.5 184 779-988 29-265 (793)
424 PRK09188 serine/threonine prot 99.8 2.3E-18 4.9E-23 189.9 12.8 155 721-890 13-194 (365)
425 cd00116 LRR_RI Leucine-rich re 99.7 1E-19 2.2E-24 203.2 -1.8 250 73-323 3-291 (319)
426 KOG0590 Checkpoint kinase and 99.7 7.7E-19 1.7E-23 206.6 5.2 243 729-988 321-585 (601)
427 COG0515 SPS1 Serine/threonine 99.7 1.9E-16 4.1E-21 177.7 21.6 246 728-988 2-275 (384)
428 cd00116 LRR_RI Leucine-rich re 99.7 2.7E-19 5.9E-24 199.8 -3.2 109 508-616 193-319 (319)
429 KOG1164 Casein kinase (serine/ 99.7 1.4E-16 3.1E-21 176.9 17.9 249 727-995 19-300 (322)
430 KOG0617 Ras suppressor protein 99.7 5.6E-19 1.2E-23 163.3 -3.1 156 88-273 29-185 (264)
431 KOG0617 Ras suppressor protein 99.7 2.3E-19 4.9E-24 165.8 -6.0 162 68-236 33-195 (264)
432 KOG1023 Natriuretic peptide re 99.7 5.9E-17 1.3E-21 181.3 11.0 205 776-994 1-226 (484)
433 PLN03150 hypothetical protein; 99.7 3.4E-16 7.4E-21 187.5 13.9 154 19-177 366-527 (623)
434 KOG1163 Casein kinase (serine/ 99.6 8E-16 1.7E-20 150.4 11.6 196 718-920 8-225 (341)
435 KOG1165 Casein kinase (serine/ 99.6 9.9E-15 2.1E-19 149.4 16.0 188 727-920 29-240 (449)
436 cd05147 RIO1_euk RIO kinase fa 99.6 2E-15 4.2E-20 153.3 10.2 129 731-864 2-167 (190)
437 PRK10359 lipopolysaccharide co 99.6 2.1E-15 4.6E-20 154.2 7.1 159 725-910 30-216 (232)
438 KOG1240 Protein kinase contain 99.6 1.2E-15 2.7E-20 177.7 5.0 234 727-989 24-292 (1431)
439 KOG4158 BRPK/PTEN-induced prot 99.6 5E-15 1.1E-19 154.7 8.6 186 780-990 274-512 (598)
440 KOG0603 Ribosomal protein S6 k 99.6 4.6E-16 1E-20 173.4 -0.2 213 733-982 1-232 (612)
441 PLN03150 hypothetical protein; 99.6 4.8E-15 1E-19 177.6 8.5 118 533-652 419-538 (623)
442 cd05145 RIO1_like RIO kinase f 99.5 1.3E-13 2.7E-18 140.8 13.1 129 731-865 2-168 (190)
443 PRK12274 serine/threonine prot 99.5 2.8E-13 6E-18 135.5 12.1 174 729-918 5-209 (218)
444 KOG1033 eIF-2alpha kinase PEK/ 99.5 1.8E-14 3.9E-19 157.8 3.7 162 796-986 330-510 (516)
445 PRK10345 hypothetical protein; 99.5 4.5E-13 9.8E-18 137.1 12.5 117 728-853 4-132 (210)
446 KOG0532 Leucine-rich repeat (L 99.4 5.3E-15 1.1E-19 161.4 -2.7 175 410-617 73-247 (722)
447 KOG0606 Microtubule-associated 99.4 6E-14 1.3E-18 164.0 4.8 198 725-981 82-305 (1205)
448 KOG0532 Leucine-rich repeat (L 99.4 9.3E-15 2E-19 159.5 -2.1 193 72-274 54-247 (722)
449 KOG1166 Mitotic checkpoint ser 99.4 5.1E-13 1.1E-17 160.1 12.0 186 723-915 695-902 (974)
450 PRK14879 serine/threonine prot 99.4 2.5E-12 5.3E-17 134.2 14.1 123 732-863 2-143 (211)
451 PF14531 Kinase-like: Kinase-l 99.4 1E-12 2.3E-17 138.7 10.0 219 727-979 13-288 (288)
452 PRK09605 bifunctional UGMP fam 99.4 5.8E-12 1.3E-16 149.8 15.8 130 722-864 329-477 (535)
453 COG4886 Leucine-rich repeat (L 99.3 2.1E-12 4.5E-17 148.5 8.0 214 56-281 80-297 (394)
454 TIGR03724 arch_bud32 Kae1-asso 99.3 7.8E-12 1.7E-16 129.1 11.0 120 733-864 1-139 (199)
455 smart00090 RIO RIO-like kinase 99.3 1.3E-11 2.8E-16 129.8 11.7 131 726-864 28-198 (237)
456 KOG0590 Checkpoint kinase and 99.3 2.3E-13 4.9E-18 160.6 -2.0 246 725-988 19-286 (601)
457 cd05144 RIO2_C RIO kinase fami 99.2 3.3E-11 7.2E-16 124.0 11.1 133 719-865 8-176 (198)
458 COG4886 Leucine-rich repeat (L 99.2 9.4E-12 2E-16 143.1 6.3 182 409-622 113-295 (394)
459 cd05120 APH_ChoK_like Aminogly 99.2 7.3E-11 1.6E-15 115.7 9.0 124 730-864 2-139 (155)
460 KOG3207 Beta-tubulin folding c 99.1 1.2E-11 2.5E-16 131.9 1.3 214 90-324 119-340 (505)
461 KOG3207 Beta-tubulin folding c 99.1 2.4E-11 5.1E-16 129.6 0.3 188 162-349 143-341 (505)
462 PF14580 LRR_9: Leucine-rich r 99.1 1.4E-10 3.1E-15 113.9 5.0 110 88-202 15-126 (175)
463 KOG1266 Protein kinase [Signal 99.0 2.1E-10 4.5E-15 118.0 5.6 189 775-988 120-331 (458)
464 PF14580 LRR_9: Leucine-rich r 99.0 3.5E-10 7.7E-15 111.1 5.9 123 69-196 20-147 (175)
465 KOG1259 Nischarin, modulator o 99.0 4.1E-11 8.8E-16 121.2 -0.9 128 92-226 284-412 (490)
466 cd05119 RIO RIO kinase family, 99.0 1.4E-09 3.1E-14 110.9 10.0 126 731-865 2-165 (187)
467 KOG0531 Protein phosphatase 1, 99.0 1.5E-10 3.3E-15 133.2 1.0 173 409-617 115-290 (414)
468 KOG0531 Protein phosphatase 1, 98.9 1.7E-10 3.6E-15 132.8 -0.8 200 164-377 117-319 (414)
469 KOG1259 Nischarin, modulator o 98.9 1.8E-10 3.8E-15 116.7 -0.6 132 483-620 283-415 (490)
470 KOG0601 Cyclin-dependent kinas 98.9 1E-09 2.2E-14 123.5 5.4 237 727-988 115-379 (524)
471 PRK01723 3-deoxy-D-manno-octul 98.9 1.1E-08 2.4E-13 107.9 11.4 124 731-864 36-192 (239)
472 PF08263 LRRNT_2: Leucine rich 98.9 1.7E-09 3.7E-14 79.8 3.5 40 24-64 2-43 (43)
473 PF13855 LRR_8: Leucine rich r 98.8 2.2E-09 4.8E-14 86.7 2.9 60 557-616 2-61 (61)
474 TIGR01982 UbiB 2-polyprenylphe 98.8 1.1E-08 2.4E-13 117.5 9.3 129 731-865 122-308 (437)
475 KOG1909 Ran GTPase-activating 98.8 4.5E-10 9.8E-15 117.0 -2.1 217 86-323 24-283 (382)
476 KOG1243 Protein kinase [Genera 98.8 3.2E-08 6.9E-13 112.4 11.9 155 747-913 34-200 (690)
477 PF13855 LRR_8: Leucine rich r 98.7 6E-09 1.3E-13 84.2 3.3 59 166-224 2-60 (61)
478 KOG1909 Ran GTPase-activating 98.7 1.4E-09 3.1E-14 113.3 -0.5 230 68-299 30-311 (382)
479 KOG4658 Apoptotic ATPase [Sign 98.6 7.9E-08 1.7E-12 118.1 10.0 128 69-200 524-653 (889)
480 KOG0606 Microtubule-associated 98.6 8.5E-09 1.8E-13 121.7 -0.2 238 724-983 802-1084(1205)
481 PRK04750 ubiB putative ubiquin 98.6 2E-06 4.2E-11 100.1 19.0 133 727-865 121-315 (537)
482 KOG4658 Apoptotic ATPase [Sign 98.6 3.5E-08 7.6E-13 121.1 4.0 127 116-245 523-650 (889)
483 KOG0601 Cyclin-dependent kinas 98.5 2.8E-08 6.1E-13 112.1 2.6 241 721-993 260-519 (524)
484 KOG1859 Leucine-rich repeat pr 98.5 4.1E-09 9E-14 118.8 -6.1 180 429-618 102-293 (1096)
485 KOG1859 Leucine-rich repeat pr 98.4 1.3E-08 2.9E-13 114.8 -4.8 180 85-274 102-292 (1096)
486 cd05151 ChoK Choline Kinase (C 98.3 9E-07 2E-11 88.6 7.2 119 731-862 3-135 (170)
487 KOG4579 Leucine-rich repeat (L 98.3 5.6E-08 1.2E-12 87.9 -1.7 78 146-226 59-136 (177)
488 KOG4579 Leucine-rich repeat (L 98.3 4.4E-08 9.6E-13 88.5 -3.0 131 95-230 30-163 (177)
489 KOG2982 Uncharacterized conser 98.3 3.6E-07 7.7E-12 93.3 2.6 178 140-324 71-263 (418)
490 cd05146 RIO3_euk RIO kinase fa 98.2 2.1E-05 4.6E-10 79.2 13.6 125 732-864 3-174 (197)
491 KOG0576 Mitogen-activated prot 98.2 1.8E-07 4E-12 105.2 -1.6 180 727-917 243-431 (829)
492 KOG2982 Uncharacterized conser 98.1 4.6E-07 1E-11 92.5 -0.8 179 92-277 71-265 (418)
493 COG3642 Mn2+-dependent serine/ 98.1 2.6E-05 5.5E-10 75.7 10.3 121 732-864 2-141 (204)
494 KOG3741 Poly(A) ribonuclease s 98.1 5.7E-05 1.2E-09 83.7 13.9 162 739-915 289-475 (655)
495 cd05154 ACAD10_11_like Acyl-Co 98.0 1.8E-05 3.9E-10 83.0 8.9 109 731-841 3-117 (223)
496 COG5238 RNA1 Ran GTPase-activa 97.9 2.4E-06 5.1E-11 86.3 0.8 41 88-128 88-132 (388)
497 KOG3087 Serine/threonine prote 97.9 7.6E-05 1.7E-09 72.0 10.1 130 730-863 11-165 (229)
498 COG4248 Uncharacterized protei 97.9 0.00019 4.1E-09 77.5 13.7 261 730-999 15-307 (637)
499 COG5238 RNA1 Ran GTPase-activa 97.8 1.9E-06 4.2E-11 86.9 -2.3 197 356-569 85-316 (388)
500 PF12799 LRR_4: Leucine Rich r 97.8 1.6E-05 3.4E-10 58.8 2.5 36 557-593 2-37 (44)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.1e-116 Score=1127.68 Aligned_cols=911 Identities=31% Similarity=0.508 Sum_probs=721.5
Q ss_pred CcchHHHHHHHHHhcccCCCCccccCCCCCCCCccccceEeCCCCCcEEEEEeCCCCCcccCcccccCCCCCCEEEcCCC
Q 001838 23 ITTDQQSLLALKAHISYDPTNLFAKNWTSSTSVCSWIGITCGVNSHKVIVLNISGFNLQGTIPPQLGNLSSLETLDLSHN 102 (1007)
Q Consensus 23 ~~~~~~~ll~~k~~~~~~~~~~~~~~w~~~~~~C~w~gv~c~~~~~~v~~L~L~~~~l~~~~~~~l~~l~~L~~LdLs~N 102 (1007)
.++|++||++||+++. +|.+.+. +|..+++||.|.||+|++ .++|+.|||++|+++|.+++.|..+++|++|||++|
T Consensus 27 ~~~~~~~l~~~~~~~~-~~~~~~~-~w~~~~~~c~w~gv~c~~-~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n 103 (968)
T PLN00113 27 HAEELELLLSFKSSIN-DPLKYLS-NWNSSADVCLWQGITCNN-SSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNN 103 (968)
T ss_pred CHHHHHHHHHHHHhCC-CCcccCC-CCCCCCCCCcCcceecCC-CCcEEEEEecCCCccccCChHHhCCCCCCEEECCCC
Confidence 5689999999999985 7877776 898888999999999986 469999999999999999999999999999999999
Q ss_pred CCCCCCCcccc-CcccCcEEeccCcccCCcchhhhhhcCCCCeecccCcccCCCCchhHhhcCCCCcEEEccCccccccC
Q 001838 103 KLSGNIPSSIF-NMHTLKLLDFRDNQLFGSLSSFIFNMSSMLGIDLSINRFSGELPANICKNLPNLKKLLLGRNMFHGKI 181 (1007)
Q Consensus 103 ~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~ 181 (1007)
++++.+|..+. ++++|++|+|++|++++.+|. ..+++|+.|||++|.+++.+|..+. ++++|++|+|++|.+.+.+
T Consensus 104 ~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~-~l~~L~~L~L~~n~l~~~~ 180 (968)
T PLN00113 104 QLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIG-SFSSLKVLDLGGNVLVGKI 180 (968)
T ss_pred ccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHh-cCCCCCEEECccCcccccC
Confidence 99998998765 899999999999999887775 4578889999999998888887764 7888999999999888888
Q ss_pred CccccCCCCCcEEEcccccCCCCCCcccccccccceEEcccCcCCCCCCcccCCccccceeeccCccccccccccccCCC
Q 001838 182 PSTLSKCKQLEGLYLRFNNLSGAIPKEIGNLTKLKDIILNDNELRGEIPQEMGNLPYLVRLTLATNNLVGVVPFTIFNMS 261 (1007)
Q Consensus 182 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 261 (1007)
|..|+++++|++|+|++|++++.+|..++++++|++|+|++|++++.+|..++++++|++|+|++|++++.+|..+.+++
T Consensus 181 p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~ 260 (968)
T PLN00113 181 PNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLK 260 (968)
T ss_pred ChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCC
Confidence 88888888899999998888888888888888888888888888888888888888888888888888888888888888
Q ss_pred CCCeEEcccccccCcCCchhhcCCCCCcEEeccCCCCCCCCCccccccCCCCEEEecCCCcCCCCCcccccccccccccc
Q 001838 262 TLKKLSLLENTLWGSLPSRIDLSLPNVEFLNLGTNRFSGNIPSSITNASKLTVFQLRGNSFSGFIPNTIGNLRNLEFLNI 341 (1007)
Q Consensus 262 ~L~~L~L~~N~l~~~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 341 (1007)
+|+.|++++|.+.+.+|..+. .+++|++|+|++|.+++.+|..+.++++|+.|++++|.+++.+|..+..+++|+.|++
T Consensus 261 ~L~~L~L~~n~l~~~~p~~l~-~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L 339 (968)
T PLN00113 261 NLQYLFLYQNKLSGPIPPSIF-SLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQL 339 (968)
T ss_pred CCCEEECcCCeeeccCchhHh-hccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEEC
Confidence 888888888877777776654 5677777777777777777777777777777777777777777766666666666666
Q ss_pred cccccccCCCCccccccccccccccEEEccCCCCCCCCCCCccccccccceeeeccccccccCChhhhccCCCcEEEccC
Q 001838 342 ADNYLTSSTPELSFLSSLTNCQKIRVLILAGNPLDGILPSSIGNLSISLERFQMFNCRISGKIPQVISNLSNLLLLDLGG 421 (1007)
Q Consensus 342 s~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~ 421 (1007)
++|.+++ .+|..+..+. .|+.|++++|++++.+|..++.+++|+.|++++
T Consensus 340 ~~n~l~~-----------------------------~~p~~l~~~~-~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~ 389 (968)
T PLN00113 340 WSNKFSG-----------------------------EIPKNLGKHN-NLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFS 389 (968)
T ss_pred cCCCCcC-----------------------------cCChHHhCCC-CCcEEECCCCeeEeeCChhHhCcCCCCEEECcC
Confidence 6665554 4444444443 556666666666667777777788888888888
Q ss_pred CeeccccchhhhhccccCccccCCCccCCCCchhhhcccccceeecccccccCCCCCCCCCcccCceeecCCcccccCCC
Q 001838 422 NKLTGSIPVTFSRLLNLQGLGLAFNKLARSIPDEICHLAKLDKLILHGNKFSGAIPSCSGNLTSLRALYLGSNRFTSALP 501 (1007)
Q Consensus 422 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 501 (1007)
|++.+.+|..+..+++|+.|++++|++++.+|..+..+++|+.|++++|++++.+|..+..+++|+.|++++|++.+.+|
T Consensus 390 n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p 469 (968)
T PLN00113 390 NSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLP 469 (968)
T ss_pred CEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecC
Confidence 88888888888888888888888888888888888888888888888888888888888888888999999998888888
Q ss_pred cccccccccccccCCCCCcCCCCccccccccccceEeCccccCCCCccccccCCCCccEEeccccccccccCccCcCCCC
Q 001838 502 STIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRNNLSGDIPITIGGLKNLQKLFLANNRLEGPIPESFSGLSS 581 (1007)
Q Consensus 502 ~~~~~l~~L~~Ldls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 581 (1007)
..+ ..++|+.||+++|++++.+|..+.+++.|++|+|++|++++.+|..++.+++|++|+|++|+++|.+|..|.++++
T Consensus 470 ~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 548 (968)
T PLN00113 470 DSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPV 548 (968)
T ss_pred ccc-ccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCccc
Confidence 765 4578999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEECCCCcccccCCcchhhhcCCCeeeCcCCccccccCCCCcCCCCcccccccccccCCCCC-CCCCCCCCCCCcccc
Q 001838 582 LEILDLSKNKISGVIPTSLEKLLYLKKLNLSFNKLEGEIPRGGPFANLTAKSFLGNELLCGLPD-LHNSPCKLNKPKTHH 660 (1007)
Q Consensus 582 L~~LdLs~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~ip~~~~~~~~~~~~~~~n~~lc~~p~-~~~~~c~~~~~~~~~ 660 (1007)
|+.|||++|+++|.+|..+..+++|+.|++++|+++|.+|..++|.++...++.||+.+||.+. ...++|... .+
T Consensus 549 L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~----~~ 624 (968)
T PLN00113 549 LSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRV----RK 624 (968)
T ss_pred CCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCccccCCccccCCCCCccc----cc
Confidence 9999999999999999999999999999999999999999999999999999999999998642 234566421 11
Q ss_pred ccchhhhHHHhhhhhhHHHHHHHHHHHhHHHhhhhccc-cCCCCCCCCCC-----ccccccccHHHHHHhccccccccee
Q 001838 661 KSRKMMLLLVIALPLSTAALIIVVTLTLKWKLIRCWKS-ITGSSNDGINS-----PQAIRRFSYHELLQATDRFSKNNLL 734 (1007)
Q Consensus 661 ~s~~~~~~~~i~i~~~~~~~i~~~~~~~~~~~~r~~~~-~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~i 734 (1007)
. ...+++++++++ ++++++++++.++++++|++.. .......+.+. ......++++++.. .|...+.|
T Consensus 625 ~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i 698 (968)
T PLN00113 625 T-PSWWFYITCTLG--AFLVLALVAFGFVFIRGRNNLELKRVENEDGTWELQFFDSKVSKSITINDILS---SLKEENVI 698 (968)
T ss_pred c-ceeeeehhHHHH--HHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccchhhhHHHHHh---hCCcccEE
Confidence 1 111221222221 1112222222222221121111 11111111111 11123355555544 46778899
Q ss_pred cccCceEEEEEEE-cCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecCCCChhHhh
Q 001838 735 GIGSFGSVYVARL-QDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRL 813 (1007)
Q Consensus 735 g~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~gsL~~~l 813 (1007)
|+|+||+||+|+. .+|+.||||+++.... ...+|++++++++|||||+++|+|.+++..|+|||||++|+|.+++
T Consensus 699 g~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l 774 (968)
T PLN00113 699 SRGKKGASYKGKSIKNGMQFVVKEINDVNS----IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVL 774 (968)
T ss_pred ccCCCeeEEEEEECCCCcEEEEEEccCCcc----ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHH
Confidence 9999999999987 4789999999875432 1235688999999999999999999999999999999999999999
Q ss_pred hcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccccc---c--------ceeecceecCCCCcccccccccCCccc
Q 001838 814 YSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVAH---I--------SDFSIAKFLNGQDQLSMQTQTLATIGY 882 (1007)
Q Consensus 814 ~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~k---l--------~DFGla~~~~~~~~~~~~~~~~gt~~y 882 (1007)
+. ++|.++.+|+.|+|+|++|||+.++++|+|||++- + .+||.+..... .....||++|
T Consensus 775 ~~----l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~~~~~~~~~~------~~~~~~t~~y 844 (968)
T PLN00113 775 RN----LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLRLSLPGLLCT------DTKCFISSAY 844 (968)
T ss_pred hc----CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEEecccccccc------CCCccccccc
Confidence 63 78999999999999999999877789999998751 1 12443332211 1234688999
Q ss_pred ccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCc-cHHHHhhhhhccchhhhHHHHHHHH
Q 001838 883 MAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPI-SVMEVIDTNLLSGEERYFAAKEQSL 961 (1007)
Q Consensus 883 ~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~ 961 (1007)
||||++.+..++.|+|||||||++|||+||+.||+........+.+|+...... .....+|+.+..... ...+..
T Consensus 845 ~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 920 (968)
T PLN00113 845 VAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVS----VNQNEI 920 (968)
T ss_pred cCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCC----ccHHHH
Confidence 999999999999999999999999999999999976655566778887655432 334445544422111 122345
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhc
Q 001838 962 LSILNLATECTIESPGKRINAREIVTGLLKIRDTLVKS 999 (1007)
Q Consensus 962 ~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~~~~~~~ 999 (1007)
.++.+++.+||+.||++||||+||+++|+++.+.....
T Consensus 921 ~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~~~~ 958 (968)
T PLN00113 921 VEVMNLALHCTATDPTARPCANDVLKTLESASRSSSSC 958 (968)
T ss_pred HHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhcccccc
Confidence 67899999999999999999999999999997755444
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=2e-62 Score=627.54 Aligned_cols=519 Identities=36% Similarity=0.579 Sum_probs=447.2
Q ss_pred CCCCEEEcCCCCCCCCCCccccCcccCcEEeccCcccCCcchhhhh-hcCCCCeecccCcccCCCCchhHhhcCCCCcEE
Q 001838 92 SSLETLDLSHNKLSGNIPSSIFNMHTLKLLDFRDNQLFGSLSSFIF-NMSSMLGIDLSINRFSGELPANICKNLPNLKKL 170 (1007)
Q Consensus 92 ~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-~l~~L~~LdLs~N~l~~~ip~~~~~~l~~L~~L 170 (1007)
.+++.|||++|.++|.+|..|..+++|++|+|++|++++.+|..+. ++++|+.|||++|+++|.+|. ..+++|++|
T Consensus 69 ~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~---~~l~~L~~L 145 (968)
T PLN00113 69 SRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR---GSIPNLETL 145 (968)
T ss_pred CcEEEEEecCCCccccCChHHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc---cccCCCCEE
Confidence 4788999999999999999999999999999999999877776554 888999999999998888876 357888889
Q ss_pred EccCccccccCCccccCCCCCcEEEcccccCCCCCCcccccccccceEEcccCcCCCCCCcccCCccccceeeccCcccc
Q 001838 171 LLGRNMFHGKIPSTLSKCKQLEGLYLRFNNLSGAIPKEIGNLTKLKDIILNDNELRGEIPQEMGNLPYLVRLTLATNNLV 250 (1007)
Q Consensus 171 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 250 (1007)
+|++|.+++.+|..++++++|++|+|++|.+++.+|..++++++|++|+|++|++++.+|..++++++|++|+|++|+++
T Consensus 146 ~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~ 225 (968)
T PLN00113 146 DLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLS 225 (968)
T ss_pred ECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccC
Confidence 99888888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred ccccccccCCCCCCeEEcccccccCcCCchhhcCCCCCcEEeccCCCCCCCCCccccccCCCCEEEecCCCcCCCCCccc
Q 001838 251 GVVPFTIFNMSTLKKLSLLENTLWGSLPSRIDLSLPNVEFLNLGTNRFSGNIPSSITNASKLTVFQLRGNSFSGFIPNTI 330 (1007)
Q Consensus 251 ~~~p~~~~~l~~L~~L~L~~N~l~~~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 330 (1007)
+.+|..+.++++|++|++++|.+.+.+|..+. .+++|++|++++|.+++.+|..+.++++|+.|++++|.+++.+|..+
T Consensus 226 ~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~-~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~ 304 (968)
T PLN00113 226 GEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLG-NLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELV 304 (968)
T ss_pred CcCChhHhcCCCCCEEECcCceeccccChhHh-CCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhH
Confidence 88888887777777777777777666665543 56667777777777766666666666666667766666666666665
Q ss_pred ccccccccccccccccccCCCCccccccccccccccEEEccCCCCCCCCCCCccccccccceeeeccccccccCChhhhc
Q 001838 331 GNLRNLEFLNIADNYLTSSTPELSFLSSLTNCQKIRVLILAGNPLDGILPSSIGNLSISLERFQMFNCRISGKIPQVISN 410 (1007)
Q Consensus 331 ~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~l~~L~l~~n~l~~~~p~~~~~ 410 (1007)
.++++|++|++++| .+.+.+|..+..++ +|+.|++++|.+++.+|..++.
T Consensus 305 ~~l~~L~~L~l~~n-----------------------------~~~~~~~~~~~~l~-~L~~L~L~~n~l~~~~p~~l~~ 354 (968)
T PLN00113 305 IQLQNLEILHLFSN-----------------------------NFTGKIPVALTSLP-RLQVLQLWSNKFSGEIPKNLGK 354 (968)
T ss_pred cCCCCCcEEECCCC-----------------------------ccCCcCChhHhcCC-CCCEEECcCCCCcCcCChHHhC
Confidence 55555555555555 44445555555555 7888888899999999999999
Q ss_pred cCCCcEEEccCCeeccccchhhhhccccCccccCCCccCCCCchhhhcccccceeecccccccCCCCCCCCCcccCceee
Q 001838 411 LSNLLLLDLGGNKLTGSIPVTFSRLLNLQGLGLAFNKLARSIPDEICHLAKLDKLILHGNKFSGAIPSCSGNLTSLRALY 490 (1007)
Q Consensus 411 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 490 (1007)
+++|+.|+|++|++++.+|.++..+.+|+.|++++|++.+.+|..+..+++|+.|++++|++++.+|..+.++++|+.|+
T Consensus 355 ~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 434 (968)
T PLN00113 355 HNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLD 434 (968)
T ss_pred CCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcccccCCCcccccccccccccCCCCCcCCCCccccccccccceEeCccccCCCCccccccCCCCccEEecccccccc
Q 001838 491 LGSNRFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRNNLSGDIPITIGGLKNLQKLFLANNRLEG 570 (1007)
Q Consensus 491 Ls~N~l~~~~p~~~~~l~~L~~Ldls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 570 (1007)
+++|++++.+|..++.+++|+.|++++|++.+.+|..++ .++|+.||+++|++++.+|..+..+++|+.|+|++|++++
T Consensus 435 Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~-~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 513 (968)
T PLN00113 435 ISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFG-SKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSG 513 (968)
T ss_pred CcCCcccCccChhhccCCCCcEEECcCceeeeecCcccc-cccceEEECcCCccCCccChhhhhhhccCEEECcCCccee
Confidence 999999999999999999999999999999998887664 5889999999999999999999999999999999999999
Q ss_pred ccCccCcCCCCCCEEECCCCcccccCCcchhhhcCCCeeeCcCCccccccCCC-CcCCCCcccccccccccCCCCC
Q 001838 571 PIPESFSGLSSLEILDLSKNKISGVIPTSLEKLLYLKKLNLSFNKLEGEIPRG-GPFANLTAKSFLGNELLCGLPD 645 (1007)
Q Consensus 571 ~~p~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~ip~~-~~~~~~~~~~~~~n~~lc~~p~ 645 (1007)
.+|+.++++++|++|+|++|+++|.+|..+..+++|+.|+|++|+++|.+|.. ..+..+....+.+|+..+..|.
T Consensus 514 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~ 589 (968)
T PLN00113 514 EIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPS 589 (968)
T ss_pred eCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCC
Confidence 99999999999999999999999999999999999999999999999999974 2455677778889988776554
No 3
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-49 Score=438.10 Aligned_cols=278 Identities=40% Similarity=0.661 Sum_probs=237.8
Q ss_pred ccccccHHHHHHhcccccccceecccCceEEEEEEEcCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEE
Q 001838 712 AIRRFSYHELLQATDRFSKNNLLGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISAC 791 (1007)
Q Consensus 712 ~~~~~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~ 791 (1007)
..+.|+++++.+||++|+..+.||+|+||.||+|.+++|..||||++........++|.+|++++.+++|||+|+|+|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 56789999999999999999999999999999999999999999988765432135699999999999999999999999
Q ss_pred ecCC-eeEEEEEecCCCChhHhhhcCCC-CCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccce
Q 001838 792 SNDD-FKALIMEYMPNGSLENRLYSGTC-MLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISD 857 (1007)
Q Consensus 792 ~~~~-~~~lv~E~~~~gsL~~~l~~~~~-~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~D 857 (1007)
.+.+ +.+||||||++|+|+++|+.... .++|.+|++||.++|+||+|||+.+.++|||||+ +||+|
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsD 220 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSD 220 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccC
Confidence 9998 59999999999999999998765 7999999999999999999999988899999976 49999
Q ss_pred eecceecCCCCcccccccc-cCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccc-cCcchHHHHHHhhcC
Q 001838 858 FSIAKFLNGQDQLSMQTQT-LATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIF-IGELSLSRWVNDLLP 935 (1007)
Q Consensus 858 FGla~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~-~~~~~l~~~~~~~~~ 935 (1007)
||+|+..... .... ... .||.+|+||||+..+..+.|+|||||||+++|++||++|.+... .++..+..|+.....
T Consensus 221 FGLa~~~~~~-~~~~-~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~ 298 (361)
T KOG1187|consen 221 FGLAKLGPEG-DTSV-STTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLE 298 (361)
T ss_pred ccCcccCCcc-ccce-eeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHH
Confidence 9999876541 1111 112 79999999999999999999999999999999999999988644 455668999876654
Q ss_pred c-cHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHH
Q 001838 936 I-SVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKIRDT 995 (1007)
Q Consensus 936 ~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~~~ 995 (1007)
. .+.+++|+.+....... .+.+.++..++.+|++.+|++||+|.||+++|+.+...
T Consensus 299 ~~~~~eiiD~~l~~~~~~~----~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~ 355 (361)
T KOG1187|consen 299 EGKLREIVDPRLKEGEYPD----EKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILSL 355 (361)
T ss_pred CcchhheeCCCccCCCCCh----HHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence 4 78899999876321111 14567799999999999999999999999999666543
No 4
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-42 Score=379.19 Aligned_cols=244 Identities=30% Similarity=0.465 Sum_probs=198.2
Q ss_pred cceecccCceEEEEEEEcCCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCC-eeEEEEEecCCC
Q 001838 731 NNLLGIGSFGSVYVARLQDGMEVAVKVFHQRY--ERALKSFQDECEVMKRIRHRNLVKIISACSNDD-FKALIMEYMPNG 807 (1007)
Q Consensus 731 ~~~ig~G~~g~Vy~~~~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~~lv~E~~~~g 807 (1007)
.+.+|+|+||+||+|.+.....||||++.... ....++|.+|+.+|.+++|||||+++|+|.+.. ..++|||||++|
T Consensus 46 ~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~G 125 (362)
T KOG0192|consen 46 EEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGG 125 (362)
T ss_pred hhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCC
Confidence 45599999999999999844449999998653 222678999999999999999999999999887 799999999999
Q ss_pred ChhHhhhc-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC-ceecccc-------------ccceeecceecCCCCcccc
Q 001838 808 SLENRLYS-GTCMLDIFQRLNIMIDVALALEYLHFGHSTP-IIHYMVA-------------HISDFSIAKFLNGQDQLSM 872 (1007)
Q Consensus 808 sL~~~l~~-~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~-ivH~~~~-------------kl~DFGla~~~~~~~~~~~ 872 (1007)
+|.+++++ ....+++..++++|.|||+||+||| +.. |||||++ ||+|||+++...... ..
T Consensus 126 sL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH---~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~--~~ 200 (362)
T KOG0192|consen 126 SLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLH---SEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK--TS 200 (362)
T ss_pred cHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh---cCCCeeecccChhhEEEcCCCCEEEECCCccceeecccc--cc
Confidence 99999988 4667999999999999999999995 555 9999764 899999999875322 22
Q ss_pred cccccCCcccccccccc--cCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccch
Q 001838 873 QTQTLATIGYMAPEYGV--QGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGE 950 (1007)
Q Consensus 873 ~~~~~gt~~y~aPE~~~--~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~ 950 (1007)
.+...||+.|||||++. ...|+.|+|||||||++|||+||+.||.+..... ....+ +...
T Consensus 201 ~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~--~~~~v-----------~~~~----- 262 (362)
T KOG0192|consen 201 MTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQ--VASAV-----------VVGG----- 262 (362)
T ss_pred ccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHH--HHHHH-----------HhcC-----
Confidence 34478999999999999 5689999999999999999999999999754311 11111 0000
Q ss_pred hhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHhhh
Q 001838 951 ERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKIRDTLVK 998 (1007)
Q Consensus 951 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~~~~~~ 998 (1007)
.++..+..+...+..++.+||..||++||++.|++..|+.+......
T Consensus 263 -~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~ 309 (362)
T KOG0192|consen 263 -LRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISS 309 (362)
T ss_pred -CCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhcc
Confidence 01111222456789999999999999999999999999999887654
No 5
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-42 Score=377.77 Aligned_cols=242 Identities=29% Similarity=0.471 Sum_probs=203.4
Q ss_pred cccceecccCceEEEEEEEcCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecCCCC
Q 001838 729 SKNNLLGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGS 808 (1007)
Q Consensus 729 ~~~~~ig~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~gs 808 (1007)
...+.||+|-||+||.|.++....||||.++... ...++|.+|+.+|++++|+|||+++|+|..++..|||||||+.|+
T Consensus 209 ~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~Gs 287 (468)
T KOG0197|consen 209 KLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGS 287 (468)
T ss_pred HHHHHhcCCccceEEEEEEcCCCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCc
Confidence 3467899999999999999877799999998653 223678999999999999999999999999999999999999999
Q ss_pred hhHhhhc-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCccccccc
Q 001838 809 LENRLYS-GTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQ 875 (1007)
Q Consensus 809 L~~~l~~-~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~~~~ 875 (1007)
|.++|+. .+..+...+.+.++.|||+||+|| .++.+||||++ ||+|||+||.+. ++++.....
T Consensus 288 Ll~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YL---es~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~-d~~Y~~~~~ 363 (468)
T KOG0197|consen 288 LLDYLRTREGGLLNLPQLLDFAAQIAEGMAYL---ESKNYIHRDLAARNILVDEDLVVKISDFGLARLIG-DDEYTASEG 363 (468)
T ss_pred HHHHhhhcCCCccchHHHHHHHHHHHHHHHHH---HhCCccchhhhhhheeeccCceEEEcccccccccC-CCceeecCC
Confidence 9999997 456788999999999999999999 89999999864 999999999543 445544444
Q ss_pred ccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhhH
Q 001838 876 TLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYF 954 (1007)
Q Consensus 876 ~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 954 (1007)
..-+..|.|||.+..++++.|||||||||+||||+| |+.||..+... ++.+.++ ...++
T Consensus 364 ~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~--------------ev~~~le------~GyRl 423 (468)
T KOG0197|consen 364 GKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNE--------------EVLELLE------RGYRL 423 (468)
T ss_pred CCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHH--------------HHHHHHh------ccCcC
Confidence 455778999999999999999999999999999998 89998864321 1122222 12334
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHH
Q 001838 955 AAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKIRDT 995 (1007)
Q Consensus 955 ~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~~~ 995 (1007)
+.++.|+.++.++|..||..+|++|||++.+...++.+...
T Consensus 424 p~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~ 464 (468)
T KOG0197|consen 424 PRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTS 464 (468)
T ss_pred CCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence 55667888999999999999999999999999888887654
No 6
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=8e-42 Score=356.65 Aligned_cols=191 Identities=30% Similarity=0.505 Sum_probs=172.5
Q ss_pred hcccccccceecccCceEEEEEEEc-CCceEEEEEechh--hHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEE
Q 001838 724 ATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQR--YERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALI 800 (1007)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 800 (1007)
..++|...+.||+|+||+||+|+++ ++.+||||.+.+. ..+..+.+..|+++|+.++|||||++++++..++..|+|
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lV 87 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLV 87 (429)
T ss_pred ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEE
Confidence 4567888899999999999999976 5899999999876 456677889999999999999999999999999999999
Q ss_pred EEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------------ccceeecce
Q 001838 801 MEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------------HISDFSIAK 862 (1007)
Q Consensus 801 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------------kl~DFGla~ 862 (1007)
||||.||+|.+|+++++ .+++.....++.|+|.||++| |+++|||||++ ||+|||+|+
T Consensus 88 MEyC~gGDLs~yi~~~~-~l~e~t~r~Fm~QLA~alq~L---~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR 163 (429)
T KOG0595|consen 88 MEYCNGGDLSDYIRRRG-RLPEATARHFMQQLASALQFL---HENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFAR 163 (429)
T ss_pred EEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeeeccCCcceEEeccCCCCCCCceEEecccchhh
Confidence 99999999999998875 488999999999999999999 78999999875 899999999
Q ss_pred ecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCcccc
Q 001838 863 FLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFI 921 (1007)
Q Consensus 863 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~ 921 (1007)
.+.... ...+.+|++-|||||++..++|+.|+|+||.|+|+|++++|+.||+....
T Consensus 164 ~L~~~~---~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~ 219 (429)
T KOG0595|consen 164 FLQPGS---MAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETP 219 (429)
T ss_pred hCCchh---HHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCH
Confidence 987442 33567999999999999999999999999999999999999999986543
No 7
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=1.7e-45 Score=379.88 Aligned_cols=488 Identities=27% Similarity=0.363 Sum_probs=321.2
Q ss_pred cEEEEEeCCCCCcccCcccccCCCCCCEEEcCCCCCCCCCCccccCcccCcEEeccCcccCCcchhhhhhcCCCCeeccc
Q 001838 69 KVIVLNISGFNLQGTIPPQLGNLSSLETLDLSHNKLSGNIPSSIFNMHTLKLLDFRDNQLFGSLSSFIFNMSSMLGIDLS 148 (1007)
Q Consensus 69 ~v~~L~L~~~~l~~~~~~~l~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs 148 (1007)
..+.|++++|+++ .+.+++.+|..|.+|++++|+++ ..|++++.+..++.|+.++|+++ .+|..++.+.+|..||.|
T Consensus 46 ~l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s 122 (565)
T KOG0472|consen 46 DLQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCS 122 (565)
T ss_pred chhhhhhccCchh-hccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcc
Confidence 4677899999998 56778899999999999999998 68889999999999999999996 456778889999999999
Q ss_pred CcccCCCCchhHhhcCCCCcEEEccCccccccCCccccCCCCCcEEEcccccCCCCCCcccccccccceEEcccCcCCCC
Q 001838 149 INRFSGELPANICKNLPNLKKLLLGRNMFHGKIPSTLSKCKQLEGLYLRFNNLSGAIPKEIGNLTKLKDIILNDNELRGE 228 (1007)
Q Consensus 149 ~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 228 (1007)
+|.+. ++|++++ .+..|+.|+..+|+++ ..|+++.++.+|..|++.+|++....|..+ +++.|++|+...|-++ .
T Consensus 123 ~n~~~-el~~~i~-~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i-~m~~L~~ld~~~N~L~-t 197 (565)
T KOG0472|consen 123 SNELK-ELPDSIG-RLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHI-AMKRLKHLDCNSNLLE-T 197 (565)
T ss_pred cccee-ecCchHH-HHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHH-HHHHHHhcccchhhhh-c
Confidence 99998 7888887 5889999999999998 778889999999999999999985555444 4999999999999998 7
Q ss_pred CCcccCCccccceeeccCccccccccccccCCCCCCeEEcccccccCcCCchhhcCCCCCcEEeccCCCCCCCCCccccc
Q 001838 229 IPQEMGNLPYLVRLTLATNNLVGVVPFTIFNMSTLKKLSLLENTLWGSLPSRIDLSLPNVEFLNLGTNRFSGNIPSSITN 308 (1007)
Q Consensus 229 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 308 (1007)
+|..++.+.+|+.|+|..|++.. .| .|.+++.|++|+++.|.+ ..+|......++.+..|||..|+++ ..|..+.-
T Consensus 198 lP~~lg~l~~L~~LyL~~Nki~~-lP-ef~gcs~L~Elh~g~N~i-~~lpae~~~~L~~l~vLDLRdNklk-e~Pde~cl 273 (565)
T KOG0472|consen 198 LPPELGGLESLELLYLRRNKIRF-LP-EFPGCSLLKELHVGENQI-EMLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICL 273 (565)
T ss_pred CChhhcchhhhHHHHhhhccccc-CC-CCCccHHHHHHHhcccHH-HhhHHHHhcccccceeeeccccccc-cCchHHHH
Confidence 88899999999999999999975 44 788999999999999988 5788888778888888999888888 57888888
Q ss_pred cCCCCEEEecCCCcCCCCCcccccccccccccccccccccCCCCccccccccccccccE----EEccCCCCCCCCCCCcc
Q 001838 309 ASKLTVFQLRGNSFSGFIPNTIGNLRNLEFLNIADNYLTSSTPELSFLSSLTNCQKIRV----LILAGNPLDGILPSSIG 384 (1007)
Q Consensus 309 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~L~~----L~Ls~N~l~~~~p~~~~ 384 (1007)
+.+|.+||+|+|.|++ +|.+++++ .|++|-+.+|.+..+..++..-..-.-++.|+. =-++.- .|. ..+-.
T Consensus 274 LrsL~rLDlSNN~is~-Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~s--e~~-~e~~~ 348 (565)
T KOG0472|consen 274 LRSLERLDLSNNDISS-LPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQS--EGG-TETAM 348 (565)
T ss_pred hhhhhhhcccCCcccc-CCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCC--ccc-ccccC
Confidence 8888888888888885 56678888 888888888887754332211000000111111 000000 000 00000
Q ss_pred ccccccceeeeccccccccCChhhhccCCCcEEEccCCeeccccchhhhhccc---cCccccCCCccCCCCchhhhcccc
Q 001838 385 NLSISLERFQMFNCRISGKIPQVISNLSNLLLLDLGGNKLTGSIPVTFSRLLN---LQGLGLAFNKLARSIPDEICHLAK 461 (1007)
Q Consensus 385 ~l~~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~---L~~L~Ls~N~l~~~~p~~~~~l~~ 461 (1007)
+ ..++..| ....+.+.+.|++++-+++ .+|+....... ....+++.|++. .+|..+..++.
T Consensus 349 t-------------~~~~~~~-~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lke 412 (565)
T KOG0472|consen 349 T-------------LPSESFP-DIYAIITTKILDVSDKQLT-LVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKE 412 (565)
T ss_pred C-------------CCCCccc-chhhhhhhhhhcccccccc-cCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHH
Confidence 0 0000011 1122334444444444444 22322222111 344444444443 24444444433
Q ss_pred ccee-ecccccccCCCCCCCCCcccCceeecCCcccccCCCcccccccccccccCCCCCcCCCCccccccccccceEeCc
Q 001838 462 LDKL-ILHGNKFSGAIPSCSGNLTSLRALYLGSNRFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLS 540 (1007)
Q Consensus 462 L~~L-~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~Ldls~N~l~~~~~~~~~~l~~L~~L~Ls 540 (1007)
+.+. ++++|.+ +.+|..+..+++|..|+|++|-+. .+|..++.+..|+.||+|.|+|. .+|..+..+..++.+-.+
T Consensus 413 lvT~l~lsnn~i-sfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas 489 (565)
T KOG0472|consen 413 LVTDLVLSNNKI-SFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLAS 489 (565)
T ss_pred HHHHHHhhcCcc-ccchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhc
Confidence 3322 2222222 244444444444445555444443 24444444444555555555443 234334444444444445
Q ss_pred cccCCCCccccccCCCCccEEeccccccccccCccCcCCCCCCEEECCCCccc
Q 001838 541 RNNLSGDIPITIGGLKNLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNKIS 593 (1007)
Q Consensus 541 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~ 593 (1007)
+|++....|..+.++.+|+.|||.+|.|. .+|+.++++++|+.|+|++|.|.
T Consensus 490 ~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 490 NNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred cccccccChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC
Confidence 56665444444666666666666666665 56666677777777777777666
No 8
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.8e-41 Score=371.58 Aligned_cols=236 Identities=24% Similarity=0.329 Sum_probs=199.0
Q ss_pred ccccccceecccCceEEEEEEE-cCCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARL-QDGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIM 801 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 801 (1007)
.+|...+.||+|||++||.++. .+|..||+|++.+.. ....+...+||+|.++++|||||+++++|++.+..|||.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 4699999999999999999997 789999999998743 345677899999999999999999999999999999999
Q ss_pred EecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCc
Q 001838 802 EYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQ 869 (1007)
Q Consensus 802 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~ 869 (1007)
|+|++|+|.++++++ ..+++.++..++.||+.||.|| |+.+|+|||++ ||+|||+|..+..+++
T Consensus 98 ELC~~~sL~el~Krr-k~ltEpEary~l~QIv~GlkYL---H~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~E 173 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRR-KPLTEPEARYFLRQIVEGLKYL---HSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGE 173 (592)
T ss_pred EecCCccHHHHHHhc-CCCCcHHHHHHHHHHHHHHHHH---HhcCceecccchhheeecCcCcEEecccceeeeecCccc
Confidence 999999999999844 4689999999999999999999 78889999875 9999999999875433
Q ss_pred ccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccc
Q 001838 870 LSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSG 949 (1007)
Q Consensus 870 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~ 949 (1007)
. ..+.+|||-|+|||++....++..+||||+||++|.|+.|++||+... +.+..+......
T Consensus 174 r--k~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~-----------------vkety~~Ik~~~ 234 (592)
T KOG0575|consen 174 R--KKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKT-----------------VKETYNKIKLNE 234 (592)
T ss_pred c--cceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccch-----------------HHHHHHHHHhcC
Confidence 2 356899999999999999999999999999999999999999998632 122222111111
Q ss_pred hhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 950 EERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 950 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
. ..+.....++.+|+.++|+.+|.+|||+.+|+..
T Consensus 235 Y----~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 235 Y----SMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred c----ccccccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 1 1122335578999999999999999999999875
No 9
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-41 Score=350.50 Aligned_cols=245 Identities=24% Similarity=0.301 Sum_probs=199.6
Q ss_pred ccHHHHHHhcccccccceecccCceEEEEEEEc-CCceEEEEEechh-hHHHHHHHHHHHHHHHhcCCCceeEEEEEEec
Q 001838 716 FSYHELLQATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQR-YERALKSFQDECEVMKRIRHRNLVKIISACSN 793 (1007)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 793 (1007)
++.+|+.+ .+.||+|..|+|||++++ +++.+|+|++... .....+++.+|++++++.+||+||+++|+|..
T Consensus 76 i~~~dle~-------~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~ 148 (364)
T KOG0581|consen 76 ISLSDLER-------LGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYS 148 (364)
T ss_pred cCHHHhhh-------hhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEe
Confidence 55566554 678999999999999987 6899999999533 34556889999999999999999999999999
Q ss_pred CC-eeEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeec
Q 001838 794 DD-FKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSI 860 (1007)
Q Consensus 794 ~~-~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGl 860 (1007)
.+ ...++||||++|||++++...+ .+++...-+|+.+|++||.||| ++.+|||||++ ||||||.
T Consensus 149 ~~~~isI~mEYMDgGSLd~~~k~~g-~i~E~~L~~ia~~VL~GL~YLh--~~~~IIHRDIKPsNlLvNskGeVKicDFGV 225 (364)
T KOG0581|consen 149 NGEEISICMEYMDGGSLDDILKRVG-RIPEPVLGKIARAVLRGLSYLH--EERKIIHRDIKPSNLLVNSKGEVKICDFGV 225 (364)
T ss_pred CCceEEeehhhcCCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHh--hccCeeeccCCHHHeeeccCCCEEeccccc
Confidence 88 5999999999999999998653 4888899999999999999997 46899999986 9999999
Q ss_pred ceecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHH
Q 001838 861 AKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVME 940 (1007)
Q Consensus 861 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 940 (1007)
++.+... ...+.+||..|||||.+.+..|+.++||||||+.++|+++|+.||......... ..+
T Consensus 226 S~~lvnS----~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~------------~~~ 289 (364)
T KOG0581|consen 226 SGILVNS----IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLD------------IFE 289 (364)
T ss_pred cHHhhhh----hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCC------------HHH
Confidence 9987543 345678999999999999999999999999999999999999999864111111 122
Q ss_pred HhhhhhccchhhhHHHHH-HHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 001838 941 VIDTNLLSGEERYFAAKE-QSLLSILNLATECTIESPGKRINAREIVTGL 989 (1007)
Q Consensus 941 ~~d~~~~~~~~~~~~~~~-~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L 989 (1007)
.++....... +..++ ..+.++.+++..|++.||.+|||++|++++-
T Consensus 290 Ll~~Iv~~pp---P~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hp 336 (364)
T KOG0581|consen 290 LLCAIVDEPP---PRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHP 336 (364)
T ss_pred HHHHHhcCCC---CCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcCH
Confidence 2222221111 11122 2567899999999999999999999999873
No 10
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.5e-41 Score=351.86 Aligned_cols=242 Identities=26% Similarity=0.345 Sum_probs=195.7
Q ss_pred cccccccceecccCceEEEEEEEc-CCceEEEEEechhhHH-------HHHHHHHHHHHHHhcCCCceeEEEEEEecCCe
Q 001838 725 TDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYER-------ALKSFQDECEVMKRIRHRNLVKIISACSNDDF 796 (1007)
Q Consensus 725 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 796 (1007)
.+.|...+.+|+|+||.|-+|..+ +|+.||||++.++.-. ......+|+++|++++|||||+++++|..++.
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds 250 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDS 250 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCc
Confidence 356788899999999999999854 7999999999765311 12335799999999999999999999999999
Q ss_pred eEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc---------------ccceeecc
Q 001838 797 KALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA---------------HISDFSIA 861 (1007)
Q Consensus 797 ~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~---------------kl~DFGla 861 (1007)
.|||||||+||+|.+.+-..+. +.+.....+++|++.|+.|| |+.+|+|||++ ||+|||+|
T Consensus 251 ~YmVlE~v~GGeLfd~vv~nk~-l~ed~~K~~f~Qll~avkYL---H~~GI~HRDiKPeNILl~~~~e~~llKItDFGlA 326 (475)
T KOG0615|consen 251 SYMVLEYVEGGELFDKVVANKY-LREDLGKLLFKQLLTAVKYL---HSQGIIHRDIKPENILLSNDAEDCLLKITDFGLA 326 (475)
T ss_pred eEEEEEEecCccHHHHHHhccc-cccchhHHHHHHHHHHHHHH---HHcCcccccCCcceEEeccCCcceEEEecccchh
Confidence 9999999999999999976653 66667778999999999999 79999999875 89999999
Q ss_pred eecCCCCcccccccccCCcccccccccccCC---CCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccH
Q 001838 862 KFLNGQDQLSMQTQTLATIGYMAPEYGVQGR---VSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISV 938 (1007)
Q Consensus 862 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~ 938 (1007)
|..... ..+.+.+||+.|.|||++.... +..|+|+||+|||||-+++|.+||.+...+ ..+
T Consensus 327 K~~g~~---sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~-------------~sl 390 (475)
T KOG0615|consen 327 KVSGEG---SFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTD-------------PSL 390 (475)
T ss_pred hccccc---eehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCC-------------ccH
Confidence 987533 3456789999999999998765 344889999999999999999999864322 122
Q ss_pred HHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 001838 939 MEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGL 989 (1007)
Q Consensus 939 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L 989 (1007)
.+.+-.. .....+....+..++..+++.+||..||++|||+.|++++-
T Consensus 391 ~eQI~~G---~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hp 438 (475)
T KOG0615|consen 391 KEQILKG---RYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHP 438 (475)
T ss_pred HHHHhcC---cccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcCh
Confidence 2332221 11112233445677899999999999999999999999863
No 11
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=1e-44 Score=374.10 Aligned_cols=494 Identities=27% Similarity=0.383 Sum_probs=401.7
Q ss_pred ccCCCCCCEEEcCCCCCCCCCCccccCcccCcEEeccCcccCCcchhhhhhcCCCCeecccCcccCCCCchhHhhcCCCC
Q 001838 88 LGNLSSLETLDLSHNKLSGNIPSSIFNMHTLKLLDFRDNQLFGSLSSFIFNMSSMLGIDLSINRFSGELPANICKNLPNL 167 (1007)
Q Consensus 88 l~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~ip~~~~~~l~~L 167 (1007)
++.-..|+.|++++|.++ .+-+.+.+|..|..|++.+|+++. .|.+++.+..++.++.|+|+++ .+|+.+. .+.+|
T Consensus 41 wW~qv~l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~~-lp~aig~l~~l~~l~vs~n~ls-~lp~~i~-s~~~l 116 (565)
T KOG0472|consen 41 WWEQVDLQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKLSQ-LPAAIGELEALKSLNVSHNKLS-ELPEQIG-SLISL 116 (565)
T ss_pred hhhhcchhhhhhccCchh-hccHhhhcccceeEEEeccchhhh-CCHHHHHHHHHHHhhcccchHh-hccHHHh-hhhhh
Confidence 344467899999999998 566688999999999999999974 5667899999999999999999 8999997 79999
Q ss_pred cEEEccCccccccCCccccCCCCCcEEEcccccCCCCCCcccccccccceEEcccCcCCCCCCcccCCccccceeeccCc
Q 001838 168 KKLLLGRNMFHGKIPSTLSKCKQLEGLYLRFNNLSGAIPKEIGNLTKLKDIILNDNELRGEIPQEMGNLPYLVRLTLATN 247 (1007)
Q Consensus 168 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 247 (1007)
+.|+.+.|.+. .+|++++.+..|+.|+..+|+++ ..|+.+.++.+|..|++.+|+++...|..+. ++.|++||.-+|
T Consensus 117 ~~l~~s~n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N 193 (565)
T KOG0472|consen 117 VKLDCSSNELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSN 193 (565)
T ss_pred hhhhcccccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchh
Confidence 99999999998 78889999999999999999999 7888999999999999999999976666665 999999999999
Q ss_pred cccccccccccCCCCCCeEEcccccccCcCCchhhcCCCCCcEEeccCCCCCCCCCcccc-ccCCCCEEEecCCCcCCCC
Q 001838 248 NLVGVVPFTIFNMSTLKKLSLLENTLWGSLPSRIDLSLPNVEFLNLGTNRFSGNIPSSIT-NASKLTVFQLRGNSFSGFI 326 (1007)
Q Consensus 248 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~ 326 (1007)
-+. .+|..++.+.+|..|+|..|++ ..+|+ |.+...|.+|+++.|.|. .+|.+.. +++++.+|||..|+++ ..
T Consensus 194 ~L~-tlP~~lg~l~~L~~LyL~~Nki-~~lPe--f~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~ 267 (565)
T KOG0472|consen 194 LLE-TLPPELGGLESLELLYLRRNKI-RFLPE--FPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EV 267 (565)
T ss_pred hhh-cCChhhcchhhhHHHHhhhccc-ccCCC--CCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cC
Confidence 886 6788899999999999999999 46773 235677999999999998 5666654 9999999999999998 67
Q ss_pred CcccccccccccccccccccccCCCCccccccccccccccEEEccCCCCCCCCCCCcccccc-ccceeee--cccccccc
Q 001838 327 PNTIGNLRNLEFLNIADNYLTSSTPELSFLSSLTNCQKIRVLILAGNPLDGILPSSIGNLSI-SLERFQM--FNCRISGK 403 (1007)
Q Consensus 327 p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-~l~~L~l--~~n~l~~~ 403 (1007)
|+.++-+++|+.||+|+|.|++.++ +++++ .|+.|.+.+|++..+-.+-+..-.. -+++|.- ..-.++..
T Consensus 268 Pde~clLrsL~rLDlSNN~is~Lp~------sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~s 340 (565)
T KOG0472|consen 268 PDEICLLRSLERLDLSNNDISSLPY------SLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQS 340 (565)
T ss_pred chHHHHhhhhhhhcccCCccccCCc------ccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCC
Confidence 9999999999999999999999876 46777 8999999999987432211111100 1222210 00000000
Q ss_pred CChhhhccCCCcEEEccCCeeccccchhhhhccccCccccCCCccCCCCchhhhcccc---cceeecccccccCCCCCCC
Q 001838 404 IPQVISNLSNLLLLDLGGNKLTGSIPVTFSRLLNLQGLGLAFNKLARSIPDEICHLAK---LDKLILHGNKFSGAIPSCS 480 (1007)
Q Consensus 404 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~---L~~L~Ls~N~l~~~~p~~~ 480 (1007)
+ -.+-..-++ ..+..| ....+.+.+.|+++.-+++. +|++.....+ ....+++.|++. .+|..+
T Consensus 341 --e----~~~e~~~t~----~~~~~~-~~~~~i~tkiL~~s~~qlt~-VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L 407 (565)
T KOG0472|consen 341 --E----GGTETAMTL----PSESFP-DIYAIITTKILDVSDKQLTL-VPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRL 407 (565)
T ss_pred --c----ccccccCCC----CCCccc-chhhhhhhhhhccccccccc-CCHHHHHHhhhcceEEEecccchHh-hhhhhh
Confidence 0 000000000 111112 23456788999999999974 6776665555 889999999998 788888
Q ss_pred CCcccCceeecCCcccccCCCcccccccccccccCCCCCcCCCCccccccccccceEeCccccCCCCccccccCCCCccE
Q 001838 481 GNLTSLRALYLGSNRFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRNNLSGDIPITIGGLKNLQK 560 (1007)
Q Consensus 481 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~Ldls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 560 (1007)
..+..+.+.-+.+|+..+.+|..+..+++|+.|++++|-+. .+|.+++.+..|++||+|.|++. .+|..+..+..|+.
T Consensus 408 ~~lkelvT~l~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEt 485 (565)
T KOG0472|consen 408 VELKELVTDLVLSNNKISFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLET 485 (565)
T ss_pred HHHHHHHHHHHhhcCccccchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHH
Confidence 77777776555555555689999999999999999999886 58899999999999999999998 89999988888999
Q ss_pred EeccccccccccCccCcCCCCCCEEECCCCcccccCCcchhhhcCCCeeeCcCCccc
Q 001838 561 LFLANNRLEGPIPESFSGLSSLEILDLSKNKISGVIPTSLEKLLYLKKLNLSFNKLE 617 (1007)
Q Consensus 561 L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~ls~N~l~ 617 (1007)
+-.++|++....|+.+.+|.+|..|||.+|.|. .+|..+++|++|+.|++++|+|.
T Consensus 486 llas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 486 LLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred HHhccccccccChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC
Confidence 988999998777777999999999999999999 78999999999999999999998
No 12
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.3e-41 Score=385.28 Aligned_cols=246 Identities=31% Similarity=0.501 Sum_probs=206.2
Q ss_pred ccccceecccCceEEEEEEEc------CCceEEEEEechhhHH-HHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEE
Q 001838 728 FSKNNLLGIGSFGSVYVARLQ------DGMEVAVKVFHQRYER-ALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALI 800 (1007)
Q Consensus 728 ~~~~~~ig~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 800 (1007)
....+.||+|+||+||+|+.. +...||||.++..... ..++|++|+++++.++|||||+++|+|..++..++|
T Consensus 488 i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~Mv 567 (774)
T KOG1026|consen 488 IVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMV 567 (774)
T ss_pred eeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEE
Confidence 344678999999999999743 3567999999977654 778999999999999999999999999999999999
Q ss_pred EEecCCCChhHhhhcC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------cc
Q 001838 801 MEYMPNGSLENRLYSG-------------TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HI 855 (1007)
Q Consensus 801 ~E~~~~gsL~~~l~~~-------------~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl 855 (1007)
+|||..|||.++|+.. ...++..+.+.||.|||.||+|| .+..+||||+| ||
T Consensus 568 FEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YL---s~~~FVHRDLATRNCLVge~l~VKI 644 (774)
T KOG1026|consen 568 FEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYL---SSHHFVHRDLATRNCLVGENLVVKI 644 (774)
T ss_pred EEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHH---HhCcccccchhhhhceeccceEEEe
Confidence 9999999999999732 12377889999999999999999 78889999875 99
Q ss_pred ceeecceecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhc
Q 001838 856 SDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLL 934 (1007)
Q Consensus 856 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~ 934 (1007)
+|||++|.+...+.+.......-..+|||||.+..++|+++||||||||+|||++| |+.||.+...++
T Consensus 645 sDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~E----------- 713 (774)
T KOG1026|consen 645 SDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQE----------- 713 (774)
T ss_pred cccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHH-----------
Confidence 99999999877776665545556789999999999999999999999999999998 999998643322
Q ss_pred CccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHh
Q 001838 935 PISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKIRDTL 996 (1007)
Q Consensus 935 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~~~~ 996 (1007)
+.+.+.. +...+.++.++.++++||..||+..|++||+++||-.+|+...+.-
T Consensus 714 ---VIe~i~~------g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s 766 (774)
T KOG1026|consen 714 ---VIECIRA------GQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQAS 766 (774)
T ss_pred ---HHHHHHc------CCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcC
Confidence 1111111 1113456678889999999999999999999999999999876543
No 13
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=8.2e-41 Score=359.53 Aligned_cols=275 Identities=24% Similarity=0.268 Sum_probs=136.7
Q ss_pred EEEEEeCCCCCcccCcccccCCCCCCEEEcCCCCCCCCCCccccCcccCcEEeccCcccCCcchhhhhhcCCCCeecccC
Q 001838 70 VIVLNISGFNLQGTIPPQLGNLSSLETLDLSHNKLSGNIPSSIFNMHTLKLLDFRDNQLFGSLSSFIFNMSSMLGIDLSI 149 (1007)
Q Consensus 70 v~~L~L~~~~l~~~~~~~l~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~ 149 (1007)
+..||+++|.+...-+..|.++++|+.+.|..|.++ .+|.......+|+.|+|.+|.|+..-...+..+..|+.||||.
T Consensus 80 t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSr 158 (873)
T KOG4194|consen 80 TQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSR 158 (873)
T ss_pred eeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhh
Confidence 344555555555444445555555555555555554 3444444444455555555555555555555555555555555
Q ss_pred cccCCCCchhHhhcCCCCcEEEccCccccccCCccccCCCCCcEEEcccccCCCCCCcccccccccceEEcccCcCCCCC
Q 001838 150 NRFSGELPANICKNLPNLKKLLLGRNMFHGKIPSTLSKCKQLEGLYLRFNNLSGAIPKEIGNLTKLKDIILNDNELRGEI 229 (1007)
Q Consensus 150 N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 229 (1007)
|.|+ .||..-|..-.++++|+|++|.|+..-.+.|.++.+|..|.|+.|.++...+..|.+|++|+.|+|..|+|.-.-
T Consensus 159 N~is-~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive 237 (873)
T KOG4194|consen 159 NLIS-EIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVE 237 (873)
T ss_pred chhh-cccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeeh
Confidence 5554 444444433445555555555555444455555555555555555555444444555555555555555554322
Q ss_pred CcccCCccccceeeccCccccccccccccCCCCCCeEEcccccccCcCCchhhcCCCCCcEEeccCCCCCCCCCcccccc
Q 001838 230 PQEMGNLPYLVRLTLATNNLVGVVPFTIFNMSTLKKLSLLENTLWGSLPSRIDLSLPNVEFLNLGTNRFSGNIPSSITNA 309 (1007)
Q Consensus 230 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 309 (1007)
-..|.+|++|+.|.|..|++.....+.|..+.++++|+|..|++. .+.+.+...++.|+.|+||+|.|..+-++.+...
T Consensus 238 ~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~-~vn~g~lfgLt~L~~L~lS~NaI~rih~d~Wsft 316 (873)
T KOG4194|consen 238 GLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQ-AVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFT 316 (873)
T ss_pred hhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhh-hhhcccccccchhhhhccchhhhheeecchhhhc
Confidence 334555555555555555555555555555555555555555442 2222222344445555555555544444444444
Q ss_pred CCCCEEEecCCCcCCCCCcccccccccccccccccccc
Q 001838 310 SKLTVFQLRGNSFSGFIPNTIGNLRNLEFLNIADNYLT 347 (1007)
Q Consensus 310 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 347 (1007)
++|+.|||++|+|+...+++|..+..|++|+|++|.++
T Consensus 317 qkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~ 354 (873)
T KOG4194|consen 317 QKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSID 354 (873)
T ss_pred ccceeEeccccccccCChhHHHHHHHhhhhcccccchH
Confidence 44555555555554444444444444444444444443
No 14
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-41 Score=359.94 Aligned_cols=388 Identities=24% Similarity=0.281 Sum_probs=249.6
Q ss_pred EEEEeCCCCCcccCcccccCC--CCCCEEEcCCCCCCCCCCccccCcccCcEEeccCcccCCcchhhhhhcCCCCeeccc
Q 001838 71 IVLNISGFNLQGTIPPQLGNL--SSLETLDLSHNKLSGNIPSSIFNMHTLKLLDFRDNQLFGSLSSFIFNMSSMLGIDLS 148 (1007)
Q Consensus 71 ~~L~L~~~~l~~~~~~~l~~l--~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs 148 (1007)
..||.+++.+...--..+.++ +.-++||+|+|+++.+-+..|.++++|+.++|.+|.|+ .+|.+....+.|+.|+|.
T Consensus 55 ~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~ 133 (873)
T KOG4194|consen 55 RLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLR 133 (873)
T ss_pred eeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeee
Confidence 345555555543211111111 24567999999999988999999999999999999986 456666666678888888
Q ss_pred CcccCCCCchhHhhcCCCCcEEEccCccccccCCccccCCCCCcEEEcccccCCCCCCcccccccccceEEcccCcCCCC
Q 001838 149 INRFSGELPANICKNLPNLKKLLLGRNMFHGKIPSTLSKCKQLEGLYLRFNNLSGAIPKEIGNLTKLKDIILNDNELRGE 228 (1007)
Q Consensus 149 ~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 228 (1007)
+|.|+ .+..+....++.|+.||||.|.|+.+...+|..-.++++|+|++|.|+..--..|.++.+|.+|.|+.|+++..
T Consensus 134 ~N~I~-sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittL 212 (873)
T KOG4194|consen 134 HNLIS-SVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTL 212 (873)
T ss_pred ccccc-cccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCccccc
Confidence 88887 66666666788888888888888866666777778888888888888877777888888888888888888876
Q ss_pred CCcccCCccccceeeccCccccccccccccCCCCCCeEEcccccccCcCCchhhcCCCCCcEEeccCCCCCCCCCccccc
Q 001838 229 IPQEMGNLPYLVRLTLATNNLVGVVPFTIFNMSTLKKLSLLENTLWGSLPSRIDLSLPNVEFLNLGTNRFSGNIPSSITN 308 (1007)
Q Consensus 229 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 308 (1007)
.+..|.+|++|+.|+|..|+|.-+.-.+|.++.+|+.|.|..|.+. .+... .|..
T Consensus 213 p~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~-kL~DG------------------------~Fy~ 267 (873)
T KOG4194|consen 213 PQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDIS-KLDDG------------------------AFYG 267 (873)
T ss_pred CHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcc-cccCc------------------------ceee
Confidence 6777888888888888888876555556666666666666666552 34444 4444
Q ss_pred cCCCCEEEecCCCcCCCCCcccccccccccccccccccccCCCCccccccccccccccEEEccCCCCCCCCCCCcccccc
Q 001838 309 ASKLTVFQLRGNSFSGFIPNTIGNLRNLEFLNIADNYLTSSTPELSFLSSLTNCQKIRVLILAGNPLDGILPSSIGNLSI 388 (1007)
Q Consensus 309 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 388 (1007)
+.+++.|+|+.|+++..-.+++.+++.|+.|+||+|.|..+.++ +..-+++|++|+|++|+++..
T Consensus 268 l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d-----~WsftqkL~~LdLs~N~i~~l---------- 332 (873)
T KOG4194|consen 268 LEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHID-----SWSFTQKLKELDLSSNRITRL---------- 332 (873)
T ss_pred ecccceeecccchhhhhhcccccccchhhhhccchhhhheeecc-----hhhhcccceeEeccccccccC----------
Confidence 45555555555555444445555555555555555555443322 222334444444444443322
Q ss_pred ccceeeeccccccccCChhhhccCCCcEEEccCCeeccccchhhhhccccCccccCCCccCCCCch---hhhccccccee
Q 001838 389 SLERFQMFNCRISGKIPQVISNLSNLLLLDLGGNKLTGSIPVTFSRLLNLQGLGLAFNKLARSIPD---EICHLAKLDKL 465 (1007)
Q Consensus 389 ~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~---~~~~l~~L~~L 465 (1007)
-++.|..++.|++|+|++|.|+..-...|..+.+|+.|||++|.|+..+-+ .|..+++|+.|
T Consensus 333 ---------------~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL 397 (873)
T KOG4194|consen 333 ---------------DEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKL 397 (873)
T ss_pred ---------------ChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhhe
Confidence 223344445555555555555544445555555555555555555544432 35556677777
Q ss_pred ecccccccCCCCCCCCCcccCceeecCCcccccCCCcccccccccccccCC
Q 001838 466 ILHGNKFSGAIPSCSGNLTSLRALYLGSNRFTSALPSTIWNLKDILFFDVS 516 (1007)
Q Consensus 466 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~Ldls 516 (1007)
+|.+|++......+|.++.+|++|||.+|.|.++-|.+|..+ .|..|-++
T Consensus 398 ~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~n 447 (873)
T KOG4194|consen 398 RLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMN 447 (873)
T ss_pred eecCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhc
Confidence 777777765555566777777777777777766666666665 55555443
No 15
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-40 Score=369.92 Aligned_cols=260 Identities=24% Similarity=0.431 Sum_probs=214.5
Q ss_pred ccccccHHHHHHhcccc---------cccceecccCceEEEEEEEcC----CceEEEEEechhh-HHHHHHHHHHHHHHH
Q 001838 712 AIRRFSYHELLQATDRF---------SKNNLLGIGSFGSVYVARLQD----GMEVAVKVFHQRY-ERALKSFQDECEVMK 777 (1007)
Q Consensus 712 ~~~~~~~~~~~~~~~~~---------~~~~~ig~G~~g~Vy~~~~~~----g~~vavK~~~~~~-~~~~~~~~~E~~~l~ 777 (1007)
...+++|+|--+|...| .+.++||.|.||+||+|+++- ...||||.++... ++.+.+|+.|+.||.
T Consensus 606 YiDP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMG 685 (996)
T KOG0196|consen 606 YIDPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMG 685 (996)
T ss_pred ecCCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcc
Confidence 35567777665554444 456899999999999999763 4579999999764 566789999999999
Q ss_pred hcCCCceeEEEEEEecCCeeEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc----
Q 001838 778 RIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA---- 853 (1007)
Q Consensus 778 ~l~H~niv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~---- 853 (1007)
++.||||++|.|+.......+||.|||++|+|+.+|+.+.+.+.+.+...+..+||.||.|| .+.++||||++
T Consensus 686 QFdHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYL---sdm~YVHRDLAARNI 762 (996)
T KOG0196|consen 686 QFDHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYL---SDMNYVHRDLAARNI 762 (996)
T ss_pred cCCCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHH---hhcCchhhhhhhhhe
Confidence 99999999999999999999999999999999999998888899999999999999999999 89999999764
Q ss_pred --------ccceeecceecCCCCcccc-cccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCc
Q 001838 854 --------HISDFSIAKFLNGQDQLSM-QTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGE 923 (1007)
Q Consensus 854 --------kl~DFGla~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~ 923 (1007)
||+|||++|.+.++.+... ..+..-..+|.|||.+...+++.++||||||||+||.++ |+.||-++...+
T Consensus 763 LVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQd 842 (996)
T KOG0196|consen 763 LVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD 842 (996)
T ss_pred eeccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHH
Confidence 9999999998865542221 122233678999999999999999999999999999776 999987643211
Q ss_pred chHHHHHHhhcCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHH
Q 001838 924 LSLSRWVNDLLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKIRD 994 (1007)
Q Consensus 924 ~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~~ 994 (1007)
+...++. ..+.+.+.+++..+.+||..||++|-.+||++.+|+..|.++-+
T Consensus 843 --------------VIkaIe~------gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIr 893 (996)
T KOG0196|consen 843 --------------VIKAIEQ------GYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIR 893 (996)
T ss_pred --------------HHHHHHh------ccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhc
Confidence 1222221 22334556778899999999999999999999999999998754
No 16
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=1.6e-39 Score=324.65 Aligned_cols=256 Identities=22% Similarity=0.294 Sum_probs=196.0
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY--ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIME 802 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E 802 (1007)
++|+...++|+|+||+||||+.+ +|+.||||++.... +...+-.++|+++|++++|||+|.++++|......+||+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 56888899999999999999977 59999999997543 3445678999999999999999999999999999999999
Q ss_pred ecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcc
Q 001838 803 YMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQL 870 (1007)
Q Consensus 803 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~ 870 (1007)
||+. ++.+-|.+....++.....+|..|+++|+.|+ |++++||||++ |+||||+|+.+... .
T Consensus 82 ~~dh-TvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~c---Hk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~p--g 155 (396)
T KOG0593|consen 82 YCDH-TVLHELERYPNGVPSELVKKYLYQLLKAIHFC---HKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAP--G 155 (396)
T ss_pred ecch-HHHHHHHhccCCCCHHHHHHHHHHHHHHhhhh---hhcCeecccCChhheEEecCCcEEeccchhhHhhcCC--c
Confidence 9987 55555666666689999999999999999999 78899999875 99999999998632 2
Q ss_pred cccccccCCccccccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCCcccc-CcchH-HHHHHhhcCccHHHHhhhhh-
Q 001838 871 SMQTQTLATIGYMAPEYGVQ-GRVSTRGDVYSYGIMLMETFTGKKPTDEIFI-GELSL-SRWVNDLLPISVMEVIDTNL- 946 (1007)
Q Consensus 871 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvil~elltG~~p~~~~~~-~~~~l-~~~~~~~~~~~~~~~~d~~~- 946 (1007)
...+..+.|.+|+|||.+.+ .+|+..+||||.||++.||++|.+-|.+..+ +.... ..-.....| +-.+++...-
T Consensus 156 d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~p-rhq~iF~~N~~ 234 (396)
T KOG0593|consen 156 DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIP-RHQSIFSSNPF 234 (396)
T ss_pred chhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCH-HHHHHhccCCc
Confidence 23466789999999999887 6899999999999999999999998876432 11111 111122222 2222222111
Q ss_pred c-----cchh---hhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 947 L-----SGEE---RYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 947 ~-----~~~~---~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
. .... .-....+....-+++++..|++.||++|++.+|++.+
T Consensus 235 F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H 284 (396)
T KOG0593|consen 235 FHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHH 284 (396)
T ss_pred eeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence 0 0000 0001112334468999999999999999999998864
No 17
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=9.4e-39 Score=347.70 Aligned_cols=248 Identities=25% Similarity=0.367 Sum_probs=198.2
Q ss_pred ccccccceecccCceEEEEEEEcCCceEEEEEechh--hHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEe
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQDGMEVAVKVFHQR--YERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEY 803 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~ 803 (1007)
+.....+.||+|+||+||+|++. ..||||++... ..+..+.|.+||.++++-+|.||+-+.|||..+.. .||.-+
T Consensus 392 ~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTqw 468 (678)
T KOG0193|consen 392 EEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIITQW 468 (678)
T ss_pred HHhhccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeeehh
Confidence 33455788999999999999986 37999999754 35578999999999999999999999999999987 999999
Q ss_pred cCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCccc
Q 001838 804 MPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLS 871 (1007)
Q Consensus 804 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~ 871 (1007)
|+|-+|+.+++-....++..+.+.||.|||+||.|| |.++|||||++ ||+|||++..-..-....
T Consensus 469 CeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YL---HAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~ 545 (678)
T KOG0193|consen 469 CEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYL---HAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQ 545 (678)
T ss_pred ccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhh---hhhhhhhhhccccceEEccCCcEEEecccceeeeeeecccc
Confidence 999999999998777899999999999999999999 78999999764 899999997643222222
Q ss_pred ccccccCCccccccccccc---CCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhcc
Q 001838 872 MQTQTLATIGYMAPEYGVQ---GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLS 948 (1007)
Q Consensus 872 ~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~ 948 (1007)
......|...|||||++.. .+|++.+||||||||+|||+||..||..... +..-|+... ...+
T Consensus 546 q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~---dqIifmVGr--G~l~--------- 611 (678)
T KOG0193|consen 546 QLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNR---DQIIFMVGR--GYLM--------- 611 (678)
T ss_pred ccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCCh---hheEEEecc--cccC---------
Confidence 2244568889999999875 4699999999999999999999999983211 111121111 0000
Q ss_pred chhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHH
Q 001838 949 GEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKIRDT 995 (1007)
Q Consensus 949 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~~~ 995 (1007)
.+.......+.+++.+|+..||.+++++||.+.+|+.+|+++..+
T Consensus 612 --pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~ 656 (678)
T KOG0193|consen 612 --PDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPS 656 (678)
T ss_pred --ccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhc
Confidence 011112234566899999999999999999999999999988776
No 18
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-38 Score=375.62 Aligned_cols=248 Identities=27% Similarity=0.450 Sum_probs=205.5
Q ss_pred ccccceecccCceEEEEEEEcC--Cc----eEEEEEechh-hHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEE
Q 001838 728 FSKNNLLGIGSFGSVYVARLQD--GM----EVAVKVFHQR-YERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALI 800 (1007)
Q Consensus 728 ~~~~~~ig~G~~g~Vy~~~~~~--g~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 800 (1007)
-...+.||+|+||.||+|...+ |. .||||.+++. ..+...+|.+|..+|++++|||||+++|+|.+....+++
T Consensus 694 v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~ 773 (1025)
T KOG1095|consen 694 VTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLIL 773 (1025)
T ss_pred eEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEE
Confidence 3456889999999999998653 43 4999998765 356678999999999999999999999999999999999
Q ss_pred EEecCCCChhHhhhcC------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecce
Q 001838 801 MEYMPNGSLENRLYSG------TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAK 862 (1007)
Q Consensus 801 ~E~~~~gsL~~~l~~~------~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~ 862 (1007)
+|||++|+|..+|++. ...+...+.+.++.|||+|+.|| ++++.||||++ ||+|||+||
T Consensus 774 leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YL---e~~~fvHRDLAaRNCLL~~~r~VKIaDFGlAr 850 (1025)
T KOG1095|consen 774 LEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYL---ESKHFVHRDLAARNCLLDERRVVKIADFGLAR 850 (1025)
T ss_pred ehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHH---HhCCCcCcchhhhheeecccCcEEEcccchhH
Confidence 9999999999999876 55789999999999999999999 78889999764 999999999
Q ss_pred ecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHHHH
Q 001838 863 FLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEV 941 (1007)
Q Consensus 863 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 941 (1007)
.+...+.+.......-...|||||++.++.++.|+|||||||++||++| |..||.+... .++
T Consensus 851 Diy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n-----------------~~v 913 (1025)
T KOG1095|consen 851 DIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSN-----------------FEV 913 (1025)
T ss_pred hhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcch-----------------HHH
Confidence 7765555544333344578999999999999999999999999999999 8999986321 111
Q ss_pred hhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHhhh
Q 001838 942 IDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKIRDTLVK 998 (1007)
Q Consensus 942 ~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~~~~~~ 998 (1007)
+...+..+ +.+.++.|+..++++|..||+.+|++||+++.+++++..|......
T Consensus 914 ~~~~~~gg---RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~~ 967 (1025)
T KOG1095|consen 914 LLDVLEGG---RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAALG 967 (1025)
T ss_pred HHHHHhCC---ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhcc
Confidence 11111111 3445567788899999999999999999999999999998876543
No 19
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.1e-39 Score=319.38 Aligned_cols=243 Identities=21% Similarity=0.311 Sum_probs=191.9
Q ss_pred ccccccceecccCceEEEEEE-EcCCceEEEEEechh--hHHHHHHHHHHHHHHHhcCCCceeEEEE-EEecCCe-eEEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQR--YERALKSFQDECEVMKRIRHRNLVKIIS-ACSNDDF-KALI 800 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~-~~~~~~~-~~lv 800 (1007)
.+|.+.++||+|+||+|||+. ..+|..||.|.++-. +.+.++....|+.+|++++|||||++++ -|.++.. .+||
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 357888999999999999997 558999999998743 3566678899999999999999999998 4444444 8999
Q ss_pred EEecCCCChhHhhh---cCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--ceecccc------------ccceeeccee
Q 001838 801 MEYMPNGSLENRLY---SGTCMLDIFQRLNIMIDVALALEYLHFGHSTP--IIHYMVA------------HISDFSIAKF 863 (1007)
Q Consensus 801 ~E~~~~gsL~~~l~---~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~--ivH~~~~------------kl~DFGla~~ 863 (1007)
||||.+|+|.++++ +++..+++..++++..|+++||.++|+.- ++ |+|||++ |++|||+++.
T Consensus 99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~-~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~ 177 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKI-PRGTVMHRDIKPANIFLTANGVVKLGDFGLGRF 177 (375)
T ss_pred HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccc-cccceeeccCcchheEEcCCCceeeccchhHhH
Confidence 99999999999886 34567999999999999999999997521 34 8999764 9999999999
Q ss_pred cCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhh
Q 001838 864 LNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVID 943 (1007)
Q Consensus 864 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d 943 (1007)
+..... ...+.+|||+||+||.+...+|+.|+||||+||++|||..-++||.+. ++.+..+.
T Consensus 178 l~s~~t--fA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~-----n~~~L~~K----------- 239 (375)
T KOG0591|consen 178 LSSKTT--FAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD-----NLLSLCKK----------- 239 (375)
T ss_pred hcchhH--HHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc-----cHHHHHHH-----------
Confidence 864432 335678999999999999999999999999999999999999999863 12111111
Q ss_pred hhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 001838 944 TNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLL 990 (1007)
Q Consensus 944 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~ 990 (1007)
+...... +-..+..+.++..++..|+..||+.||+.-..++.++
T Consensus 240 --I~qgd~~-~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~ 283 (375)
T KOG0591|consen 240 --IEQGDYP-PLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQ 283 (375)
T ss_pred --HHcCCCC-CCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHH
Confidence 1111100 0112344667899999999999999999655555544
No 20
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=1e-38 Score=341.93 Aligned_cols=240 Identities=25% Similarity=0.387 Sum_probs=195.1
Q ss_pred ccccccHHHHHHhcccccccceecccCceEEEEEEEcCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEE
Q 001838 712 AIRRFSYHELLQATDRFSKNNLLGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISAC 791 (1007)
Q Consensus 712 ~~~~~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~ 791 (1007)
..+++.|++|.+ .+-+|+|+.|.||+|+++ ++.||||+++.-. ..+|+-|++++||||+.+.|+|
T Consensus 117 e~WeiPFe~IsE-------LeWlGSGaQGAVF~Grl~-netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVC 181 (904)
T KOG4721|consen 117 ELWEIPFEEISE-------LEWLGSGAQGAVFLGRLH-NETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVC 181 (904)
T ss_pred hhccCCHHHhhh-------hhhhccCcccceeeeecc-CceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeee
Confidence 356677777755 577999999999999997 7899999886542 2578899999999999999999
Q ss_pred ecCCeeEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceee
Q 001838 792 SNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFS 859 (1007)
Q Consensus 792 ~~~~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFG 859 (1007)
...-.+|||||||+.|-|+..|+.+.. +.......+..+||.||.|| |.+.|||||+ +||+|||
T Consensus 182 tqsPcyCIiMEfCa~GqL~~VLka~~~-itp~llv~Wsk~IA~GM~YL---H~hKIIHRDLKSPNiLIs~~d~VKIsDFG 257 (904)
T KOG4721|consen 182 TQSPCYCIIMEFCAQGQLYEVLKAGRP-ITPSLLVDWSKGIAGGMNYL---HLHKIIHRDLKSPNILISYDDVVKISDFG 257 (904)
T ss_pred cCCceeEEeeeccccccHHHHHhccCc-cCHHHHHHHHHHhhhhhHHH---HHhhHhhhccCCCceEeeccceEEecccc
Confidence 999999999999999999999987664 66677888999999999999 6778999965 4999999
Q ss_pred cceecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHH
Q 001838 860 IAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVM 939 (1007)
Q Consensus 860 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~ 939 (1007)
.++...+. .+.-..+||..|||||++...+.++|+||||||||||||+||..||.+..... ..| .+....
T Consensus 258 TS~e~~~~---STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssA---IIw--GVGsNs-- 327 (904)
T KOG4721|consen 258 TSKELSDK---STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSA---IIW--GVGSNS-- 327 (904)
T ss_pred chHhhhhh---hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhe---eEE--eccCCc--
Confidence 99977533 33456789999999999999999999999999999999999999998632110 011 000011
Q ss_pred HHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHH
Q 001838 940 EVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKI 992 (1007)
Q Consensus 940 ~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i 992 (1007)
...+.+..++.-+.-|++.||+..|..||++++|+.+|.-.
T Consensus 328 ------------L~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa 368 (904)
T KOG4721|consen 328 ------------LHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIA 368 (904)
T ss_pred ------------ccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence 11223445666788899999999999999999999998643
No 21
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-38 Score=348.16 Aligned_cols=245 Identities=27% Similarity=0.401 Sum_probs=198.1
Q ss_pred ccccceecccCceEEEEEEEcC--C--ce-EEEEEech---hhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEE
Q 001838 728 FSKNNLLGIGSFGSVYVARLQD--G--ME-VAVKVFHQ---RYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKAL 799 (1007)
Q Consensus 728 ~~~~~~ig~G~~g~Vy~~~~~~--g--~~-vavK~~~~---~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 799 (1007)
-...+.||+|+||+||+|++.. + .. ||||..+. .......+|.+|+++|++++|||||+++|++......|+
T Consensus 159 v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~i 238 (474)
T KOG0194|consen 159 IELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLML 238 (474)
T ss_pred ccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEE
Confidence 3345899999999999998653 2 23 89999985 235677899999999999999999999999999999999
Q ss_pred EEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCC
Q 001838 800 IMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQ 867 (1007)
Q Consensus 800 v~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~ 867 (1007)
|||+|+||+|.++|++....++..++.+++.++|.||+|| |+++++|||+| ||+|||+++...
T Consensus 239 vmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YL---h~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~-- 313 (474)
T KOG0194|consen 239 VMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYL---HSKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGS-- 313 (474)
T ss_pred EEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHH---HHCCCcchhHhHHHheecCCCeEEeCccccccCCc--
Confidence 9999999999999998776799999999999999999999 78999999875 999999998653
Q ss_pred Ccccccc-cccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHH-HhhcCccHHHHhhh
Q 001838 868 DQLSMQT-QTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWV-NDLLPISVMEVIDT 944 (1007)
Q Consensus 868 ~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~-~~~~~~~~~~~~d~ 944 (1007)
.+.... ...-...|+|||.+....|+.++|||||||++||+++ |..||.+.... ....++ ....+
T Consensus 314 -~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~--~v~~kI~~~~~r--------- 381 (474)
T KOG0194|consen 314 -QYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY--EVKAKIVKNGYR--------- 381 (474)
T ss_pred -ceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH--HHHHHHHhcCcc---------
Confidence 122212 2234678999999999999999999999999999998 89999874321 122222 11100
Q ss_pred hhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHhhh
Q 001838 945 NLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKIRDTLVK 998 (1007)
Q Consensus 945 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~~~~~~ 998 (1007)
.+.+...+.++..++.+||..+|++||||.++.+.++.+......
T Consensus 382 ---------~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~ 426 (474)
T KOG0194|consen 382 ---------MPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEA 426 (474)
T ss_pred ---------CCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhcccc
Confidence 011112355688888999999999999999999999999877553
No 22
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-38 Score=336.08 Aligned_cols=256 Identities=21% Similarity=0.268 Sum_probs=196.8
Q ss_pred cccccccceecccCceEEEEEEEc-CCceEEEEEechhhHHH-HHHHHHHHHHHHhcC-CCceeEEEEEEecCC-eeEEE
Q 001838 725 TDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERA-LKSFQDECEVMKRIR-HRNLVKIISACSNDD-FKALI 800 (1007)
Q Consensus 725 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~-~~~lv 800 (1007)
.++|...+.||.|+||.||+|+-. +|..||||++++..... .---.+|+..|++++ |||||++.+++.+.+ ..|+|
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fV 88 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFV 88 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeee
Confidence 468899999999999999999854 69999999998775322 122368999999998 999999999998887 99999
Q ss_pred EEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCC
Q 001838 801 MEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQD 868 (1007)
Q Consensus 801 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~ 868 (1007)
||||+. +|+++++++...+++..++.|+.||.+||+|+ |.+|+.|||++ ||+|||+||.+....
T Consensus 89 fE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hi---Hk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~Skp 164 (538)
T KOG0661|consen 89 FEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHI---HKHGFFHRDLKPENILISGNDVIKIADFGLAREVRSKP 164 (538)
T ss_pred HHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHH---HhcCcccccCChhheEecccceeEecccccccccccCC
Confidence 999986 99999998888999999999999999999999 78899999764 999999999987554
Q ss_pred cccccccccCCccccccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhc-C--ccHHH----
Q 001838 869 QLSMQTQTLATIGYMAPEYGVQ-GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLL-P--ISVME---- 940 (1007)
Q Consensus 869 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~-~--~~~~~---- 940 (1007)
.+ +..+.|++|+|||++.. +.|+.++||||+|||++|+.+=++-|.+..+-+ .+.+...-.. | ....+
T Consensus 165 PY---TeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~D-qi~KIc~VLGtP~~~~~~eg~~L 240 (538)
T KOG0661|consen 165 PY---TEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEID-QIYKICEVLGTPDKDSWPEGYNL 240 (538)
T ss_pred Cc---chhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHH-HHHHHHHHhCCCccccchhHHHH
Confidence 44 66789999999998765 569999999999999999999998887643211 1111111111 0 01111
Q ss_pred --Hhhhhhccc-hhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 941 --VIDTNLLSG-EERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 941 --~~d~~~~~~-~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
.+.-..... ........+....++.+++.+|+.+||.+||||.|++++
T Consensus 241 a~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 241 ASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred HHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 110000000 000011122356689999999999999999999999986
No 23
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.1e-37 Score=330.66 Aligned_cols=254 Identities=26% Similarity=0.324 Sum_probs=196.0
Q ss_pred cccccccceecccCceEEEEEEE-cCCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecC--CeeEE
Q 001838 725 TDRFSKNNLLGIGSFGSVYVARL-QDGMEVAVKVFHQRY--ERALKSFQDECEVMKRIRHRNLVKIISACSND--DFKAL 799 (1007)
Q Consensus 725 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~l 799 (1007)
.+.|+..++||+|.||.||+|+. .+|+.||+|++.... +.......+||.||+++.|||||++.+...+. ..+||
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence 45677889999999999999985 479999999997654 34456678999999999999999999988776 68999
Q ss_pred EEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCC
Q 001838 800 IMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQ 867 (1007)
Q Consensus 800 v~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~ 867 (1007)
|+|||++ +|.-++......++..++..|+.|++.||+|+ |..+|+|||++ ||+|||+|++....
T Consensus 196 VFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~c---H~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~ 271 (560)
T KOG0600|consen 196 VFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYC---HSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPS 271 (560)
T ss_pred EEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHH---hhcCeeeccccccceEEcCCCCEEeccccceeeccCC
Confidence 9999987 89999988777799999999999999999999 78999999886 99999999988654
Q ss_pred CcccccccccCCcccccccccccC-CCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHH-------------HHHhh
Q 001838 868 DQLSMQTQTLATIGYMAPEYGVQG-RVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSR-------------WVNDL 933 (1007)
Q Consensus 868 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~-------------~~~~~ 933 (1007)
.. ...+..+-|.+|+|||.+.+. .|+.++|+||.|||+.||++|++.+.+..+ +...+ |-...
T Consensus 272 ~~-~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tE--veQl~kIfklcGSP~e~~W~~~k 348 (560)
T KOG0600|consen 272 GS-APYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTE--VEQLHKIFKLCGSPTEDYWPVSK 348 (560)
T ss_pred CC-cccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccH--HHHHHHHHHHhCCCChhcccccc
Confidence 33 234666789999999998875 699999999999999999999999886422 11111 21111
Q ss_pred cCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 934 LPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 934 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
.|. ...+.+.- .......+.....+...++|+..+|..||++|.||.++++.
T Consensus 349 LP~--~~~~kp~~-~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s 400 (560)
T KOG0600|consen 349 LPH--ATIFKPQQ-PYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQS 400 (560)
T ss_pred CCc--ccccCCCC-cccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcC
Confidence 110 00000000 00111111122334578999999999999999999998863
No 24
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-37 Score=319.83 Aligned_cols=230 Identities=25% Similarity=0.333 Sum_probs=187.9
Q ss_pred cccccccceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEE
Q 001838 725 TDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALI 800 (1007)
Q Consensus 725 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 800 (1007)
.++|+..++||+|+||+||.++.+ +++.+|+|++++.. .+..+....|..+|.+++||.||+++..|++.+..|+|
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 457999999999999999999865 59999999998764 33457788999999999999999999999999999999
Q ss_pred EEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCC
Q 001838 801 MEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQD 868 (1007)
Q Consensus 801 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~ 868 (1007)
+||+.||.|..+|.+++ .+++..+.-++.+|+.||.|| |+.+|||||++ +++|||+++......
T Consensus 104 ld~~~GGeLf~hL~~eg-~F~E~~arfYlaEi~lAL~~L---H~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~ 179 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQREG-RFSEDRARFYLAEIVLALGYL---HSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDG 179 (357)
T ss_pred EeccCCccHHHHHHhcC-CcchhHHHHHHHHHHHHHHHH---HhCCeeeccCCHHHeeecCCCcEEEeccccchhcccCC
Confidence 99999999999998765 478877778999999999999 78999999885 899999999654332
Q ss_pred cccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhcc
Q 001838 869 QLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLS 948 (1007)
Q Consensus 869 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~ 948 (1007)
......+||+.|||||++.+..|+..+|+||+||++|||++|.+||.... ..++. +.....
T Consensus 180 --~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~-----~~~~~------------~~I~~~ 240 (357)
T KOG0598|consen 180 --DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAED-----VKKMY------------DKILKG 240 (357)
T ss_pred --CccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCcc-----HHHHH------------HHHhcC
Confidence 22345799999999999999999999999999999999999999998632 11222 221111
Q ss_pred chhhhHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 001838 949 GEERYFAAKEQSLLSILNLATECTIESPGKRI 980 (1007)
Q Consensus 949 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp 980 (1007)
.... .+.-...+..+++.+.+..||++|.
T Consensus 241 k~~~---~p~~ls~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 241 KLPL---PPGYLSEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred cCCC---CCccCCHHHHHHHHHHhccCHHHhc
Confidence 1000 0111244688999999999999996
No 25
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-37 Score=338.15 Aligned_cols=238 Identities=24% Similarity=0.361 Sum_probs=196.9
Q ss_pred ccccccceecccCceEEEEEEE-cCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEec
Q 001838 726 DRFSKNNLLGIGSFGSVYVARL-QDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYM 804 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~ 804 (1007)
..|.....||+|+.|.||.|+. .+++.||||++........+-..+|+.+|+..+|+|||.+++.|...+..|+|||||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym 352 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM 352 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence 4577778999999999999974 468999999998766555577899999999999999999999999889999999999
Q ss_pred CCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcccc
Q 001838 805 PNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSM 872 (1007)
Q Consensus 805 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~ 872 (1007)
+||+|.+.+.... +++.++..|+.++++||+|| |..+|+|||++ ||+|||++..+..... .
T Consensus 353 ~ggsLTDvVt~~~--~~E~qIA~Icre~l~aL~fL---H~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~--K 425 (550)
T KOG0578|consen 353 EGGSLTDVVTKTR--MTEGQIAAICREILQGLKFL---HARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS--K 425 (550)
T ss_pred CCCchhhhhhccc--ccHHHHHHHHHHHHHHHHHH---HhcceeeeccccceeEeccCCcEEEeeeeeeeccccccC--c
Confidence 9999999887543 88999999999999999999 78999999875 9999999998865432 3
Q ss_pred cccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhh
Q 001838 873 QTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEER 952 (1007)
Q Consensus 873 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~ 952 (1007)
.++.+||++|||||++....|++|+||||+|++++||+-|++||-... .-..-|. +-. ....
T Consensus 426 R~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~---PlrAlyL-----------Ia~----ng~P 487 (550)
T KOG0578|consen 426 RSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNEN---PLRALYL-----------IAT----NGTP 487 (550)
T ss_pred cccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCC---hHHHHHH-----------Hhh----cCCC
Confidence 356789999999999999999999999999999999999999987421 1011111 000 0111
Q ss_pred hHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 953 YFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 953 ~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
....++.....+.+++.+||+.|+++||++.|++++
T Consensus 488 ~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 488 KLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred CcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 112234456689999999999999999999999986
No 26
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-36 Score=328.06 Aligned_cols=251 Identities=24% Similarity=0.382 Sum_probs=205.5
Q ss_pred ccccccceecccCceEEEEEEEcCCceEEEEEechhhH-HHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEec
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQDGMEVAVKVFHQRYE-RALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYM 804 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~ 804 (1007)
+...+.++||+|-||+|..|....+..||||+++.... ..+.+|.+|+++|.+++|||||+++|+|..++..++|+|||
T Consensus 538 s~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYm 617 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYM 617 (807)
T ss_pred hheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHH
Confidence 34566789999999999999998789999999987654 34589999999999999999999999999999999999999
Q ss_pred CCCChhHhhhcCCCC-CCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCccc
Q 001838 805 PNGSLENRLYSGTCM-LDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLS 871 (1007)
Q Consensus 805 ~~gsL~~~l~~~~~~-l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~ 871 (1007)
++|+|.+++..+..+ .+.....+|+.|||.||+|| .+.++||||++ ||+|||.++.+...+.+.
T Consensus 618 EnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYL---es~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~ 694 (807)
T KOG1094|consen 618 ENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYL---ESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYR 694 (807)
T ss_pred hcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHH---HhhchhhccccccceeecCcccEEecCcccccccccCCcee
Confidence 999999999877433 35667788999999999999 88999999764 999999999887777777
Q ss_pred ccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh--CCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccc
Q 001838 872 MQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT--GKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSG 949 (1007)
Q Consensus 872 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt--G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~ 949 (1007)
.+...+-..+|||||.+..++++.++|||+|||++||+++ .+.||....+++. ++-. .++++..-
T Consensus 695 vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~v--ven~--------~~~~~~~~--- 761 (807)
T KOG1094|consen 695 VQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQV--VENA--------GEFFRDQG--- 761 (807)
T ss_pred eecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHH--HHhh--------hhhcCCCC---
Confidence 7666777889999999999999999999999999999876 7889986543221 1111 11111110
Q ss_pred hhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHH
Q 001838 950 EERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKI 992 (1007)
Q Consensus 950 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i 992 (1007)
.......+.-++.++++++.+||..|.++||+++++...|++.
T Consensus 762 ~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 762 RQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred cceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 1111222344567899999999999999999999999998864
No 27
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=2.4e-37 Score=331.94 Aligned_cols=235 Identities=25% Similarity=0.377 Sum_probs=196.9
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY--ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIME 802 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E 802 (1007)
++|...+.||+|+||+||||+-+ +.+.||+|.+.+.. ++..+...+|++++++++|||||.++++|+...+.|+|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 57888999999999999999855 68999999997653 4567789999999999999999999999999999999999
Q ss_pred ecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCcc
Q 001838 803 YMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQL 870 (1007)
Q Consensus 803 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~~ 870 (1007)
||.| +|+.++..... ++++.+..|+.|++.||.|| |+.+|.|||. +|+||||+||.+.. ..
T Consensus 82 ~a~g-~L~~il~~d~~-lpEe~v~~~a~~LVsaL~yL---hs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~--~t 154 (808)
T KOG0597|consen 82 YAVG-DLFTILEQDGK-LPEEQVRAIAYDLVSALYYL---HSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMST--NT 154 (808)
T ss_pred hhhh-hHHHHHHhccC-CCHHHHHHHHHHHHHHHHHH---HhcCcccccCCcceeeecCCCceeechhhhhhhccc--Cc
Confidence 9987 99999987654 89999999999999999999 7899999976 49999999998754 33
Q ss_pred cccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccch
Q 001838 871 SMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGE 950 (1007)
Q Consensus 871 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~ 950 (1007)
.+.+...|||.|||||+..+..|+..+|+||+|||+||+++|++||.... + .+.+........
T Consensus 155 ~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~s-----i------------~~Lv~~I~~d~v 217 (808)
T KOG0597|consen 155 SVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARS-----I------------TQLVKSILKDPV 217 (808)
T ss_pred eeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHH-----H------------HHHHHHHhcCCC
Confidence 45577889999999999999999999999999999999999999997421 1 122211111111
Q ss_pred hhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 951 ERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 951 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
..+......+..++...+..||.+|.|-.+++.+
T Consensus 218 ----~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 218 ----KPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred ----CCcccccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence 1122445678999999999999999999998765
No 28
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-39 Score=367.05 Aligned_cols=506 Identities=28% Similarity=0.336 Sum_probs=259.2
Q ss_pred EEeCCCCCcccCcccccCCCCCCEEEcCCCCCCCCCCccccCcccCcEEeccCcccCCcchhhhhhcCCCCeecccCccc
Q 001838 73 LNISGFNLQGTIPPQLGNLSSLETLDLSHNKLSGNIPSSIFNMHTLKLLDFRDNQLFGSLSSFIFNMSSMLGIDLSINRF 152 (1007)
Q Consensus 73 L~L~~~~l~~~~~~~l~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l 152 (1007)
+|++..+++ .||..+..-..++.|++++|-+-...-+...+.-+|+.|||++|++ +..|..+..+.+|+.|++|.|.|
T Consensus 3 vd~s~~~l~-~ip~~i~~~~~~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~-~~fp~~it~l~~L~~ln~s~n~i 80 (1081)
T KOG0618|consen 3 VDASDEQLE-LIPEQILNNEALQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQI-SSFPIQITLLSHLRQLNLSRNYI 80 (1081)
T ss_pred cccccccCc-ccchhhccHHHHHhhhccccccccCchHHhhheeeeEEeecccccc-ccCCchhhhHHHHhhcccchhhH
Confidence 455666655 5565555555577777777766532222233333477777777776 35566666777777777777777
Q ss_pred CCCCchhHhhcCCCCcEEEccCccccccCCccccCCCCCcEEEcccccCCCCCCcccccccccceEEcccCcCCCCCCcc
Q 001838 153 SGELPANICKNLPNLKKLLLGRNMFHGKIPSTLSKCKQLEGLYLRFNNLSGAIPKEIGNLTKLKDIILNDNELRGEIPQE 232 (1007)
Q Consensus 153 ~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 232 (1007)
. ..|.+.. ++.+|++|+|.+|++. ..|..+..+++|++|++++|++. .+|..+..++.++.+..++|......+.
T Consensus 81 ~-~vp~s~~-~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~lg~- 155 (1081)
T KOG0618|consen 81 R-SVPSSCS-NMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAASNNEKIQRLGQ- 155 (1081)
T ss_pred h-hCchhhh-hhhcchhheeccchhh-cCchhHHhhhcccccccchhccC-CCchhHHhhhHHHHHhhhcchhhhhhcc-
Confidence 6 5664443 6677777777777766 56777777777777777777765 5666666777777777777622212222
Q ss_pred cCCccccceeeccCccccccccccccCCCCCCeEEcccccccCcCCchhhcCCCCCcEEeccCCCCCCCCCccccccCCC
Q 001838 233 MGNLPYLVRLTLATNNLVGVVPFTIFNMSTLKKLSLLENTLWGSLPSRIDLSLPNVEFLNLGTNRFSGNIPSSITNASKL 312 (1007)
Q Consensus 233 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 312 (1007)
.. ++.++|..|.+.+.++..+.++.. .|+|.+|.+. .. ....+++|+.+....|+++... -.-++|
T Consensus 156 ---~~-ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~-~~---dls~~~~l~~l~c~rn~ls~l~----~~g~~l 221 (1081)
T KOG0618|consen 156 ---TS-IKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME-VL---DLSNLANLEVLHCERNQLSELE----ISGPSL 221 (1081)
T ss_pred ---cc-chhhhhhhhhcccchhcchhhhhe--eeecccchhh-hh---hhhhccchhhhhhhhcccceEE----ecCcch
Confidence 11 566666666666666666555555 5666666653 11 1123455666666666555321 123455
Q ss_pred CEEEecCCCcCCCCCcccccccccccccccccccccCCCCccccccccccccccEEEccCCCCCCCCCCCccccccccce
Q 001838 313 TVFQLRGNSFSGFIPNTIGNLRNLEFLNIADNYLTSSTPELSFLSSLTNCQKIRVLILAGNPLDGILPSSIGNLSISLER 392 (1007)
Q Consensus 313 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~l~~ 392 (1007)
+.|+.++|.++...+ -..-.+|+++++++|++++.+ + .+..|.+|..+...+|+|. .+|..+.... +++.
T Consensus 222 ~~L~a~~n~l~~~~~--~p~p~nl~~~dis~n~l~~lp-~-----wi~~~~nle~l~~n~N~l~-~lp~ri~~~~-~L~~ 291 (1081)
T KOG0618|consen 222 TALYADHNPLTTLDV--HPVPLNLQYLDISHNNLSNLP-E-----WIGACANLEALNANHNRLV-ALPLRISRIT-SLVS 291 (1081)
T ss_pred heeeeccCcceeecc--ccccccceeeecchhhhhcch-H-----HHHhcccceEecccchhHH-hhHHHHhhhh-hHHH
Confidence 666666665552211 112235555555555555543 1 2344455555555555552 3333333332 4444
Q ss_pred eeeccccccccCChhhhccCCCcEEEccCCeeccccchhhhhccc-cCccccCCCccCCCCchhhhcccccceeeccccc
Q 001838 393 FQMFNCRISGKIPQVISNLSNLLLLDLGGNKLTGSIPVTFSRLLN-LQGLGLAFNKLARSIPDEICHLAKLDKLILHGNK 471 (1007)
Q Consensus 393 L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 471 (1007)
+...+|.+. -+|.....+++|+.|||..|+|...++..|.-+.. |..|+.+.|+++......=..++.|+.|++.+|.
T Consensus 292 l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~ 370 (1081)
T KOG0618|consen 292 LSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNH 370 (1081)
T ss_pred HHhhhhhhh-hCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCc
Confidence 555555554 34444444555555555555554332222222222 4444555555443221111223445555555555
Q ss_pred ccCCCCCCCCCcccCceeecCCcccccCCCcccccccccccccCCCCCcCCCCccccccccccceEeCccccCCCCcccc
Q 001838 472 FSGAIPSCSGNLTSLRALYLGSNRFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRNNLSGDIPIT 551 (1007)
Q Consensus 472 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~Ldls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 551 (1007)
++...-+.+.+...|+.|+|++|++.......+.++..|+.|+||+|+++ .+|..+.++..|++|...+|+|. ..| +
T Consensus 371 Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e 447 (1081)
T KOG0618|consen 371 LTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-E 447 (1081)
T ss_pred ccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-h
Confidence 54443334444555555555555554333334444555555555555554 23344555555555555555554 344 4
Q ss_pred ccCCCCccEEeccccccccc-cCccCcCCCCCCEEECCCCcccccCCcchhhhcCCCeeeCcCC
Q 001838 552 IGGLKNLQKLFLANNRLEGP-IPESFSGLSSLEILDLSKNKISGVIPTSLEKLLYLKKLNLSFN 614 (1007)
Q Consensus 552 ~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~ls~N 614 (1007)
+..++.|+.+|+|.|+|+.. +|...-. ++|++|||++|.=.-..-+.|..+.++...+++-|
T Consensus 448 ~~~l~qL~~lDlS~N~L~~~~l~~~~p~-p~LkyLdlSGN~~l~~d~~~l~~l~~l~~~~i~~~ 510 (1081)
T KOG0618|consen 448 LAQLPQLKVLDLSCNNLSEVTLPEALPS-PNLKYLDLSGNTRLVFDHKTLKVLKSLSQMDITLN 510 (1081)
T ss_pred hhhcCcceEEecccchhhhhhhhhhCCC-cccceeeccCCcccccchhhhHHhhhhhheecccC
Confidence 45555555555555555422 2222111 44555555555422122233444444444444433
No 29
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1e-35 Score=315.16 Aligned_cols=265 Identities=25% Similarity=0.281 Sum_probs=196.3
Q ss_pred ccccceecccCceEEEEEEEcCCceEEEEEechhhHHHHHHHHHHHHHHHh--cCCCceeEEEEEEecCC----eeEEEE
Q 001838 728 FSKNNLLGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKR--IRHRNLVKIISACSNDD----FKALIM 801 (1007)
Q Consensus 728 ~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~~~----~~~lv~ 801 (1007)
....++||+|+||.||||.+. ++.||||++.... ++.|++|-+|.+- ++|+||++++++-.... .++||+
T Consensus 212 l~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~~~---kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt 287 (534)
T KOG3653|consen 212 LQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPEQE---KQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVT 287 (534)
T ss_pred hhhHHHhhcCccceeehhhcc-CceeEEEecCHHH---HHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEe
Confidence 444678999999999999997 5999999997653 4678888888775 57999999999987665 789999
Q ss_pred EecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHh------cCCCCceecccc------------ccceeeccee
Q 001838 802 EYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHF------GHSTPIIHYMVA------------HISDFSIAKF 863 (1007)
Q Consensus 802 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~------~~~~~ivH~~~~------------kl~DFGla~~ 863 (1007)
||.+.|+|.+||..+. ++|....+|+.-+++||+|||+ +|.++|+|||++ .|+|||+|..
T Consensus 288 ~fh~kGsL~dyL~~nt--isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~ 365 (534)
T KOG3653|consen 288 EFHPKGSLCDYLKANT--ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALR 365 (534)
T ss_pred eeccCCcHHHHHHhcc--ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEE
Confidence 9999999999998765 8999999999999999999995 467899999875 5999999998
Q ss_pred cCCCCcccccccccCCcccccccccccCC-C-----CchhhHHHHHHHHHHHHhCCCCCCccccC--cchHHHHHHhhcC
Q 001838 864 LNGQDQLSMQTQTLATIGYMAPEYGVQGR-V-----STRGDVYSYGIMLMETFTGKKPTDEIFIG--ELSLSRWVNDLLP 935 (1007)
Q Consensus 864 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~-----~~~~DvwS~Gvil~elltG~~p~~~~~~~--~~~l~~~~~~~~~ 935 (1007)
+............+||.+|||||++.+.. + -.+.||||+|.|+|||+++...++..... +..+..-+.....
T Consensus 366 ~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt 445 (534)
T KOG3653|consen 366 LEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPT 445 (534)
T ss_pred ecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCC
Confidence 86554444445578999999999987642 2 24689999999999999987655321111 1112211211111
Q ss_pred -ccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHhhh
Q 001838 936 -ISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKIRDTLVK 998 (1007)
Q Consensus 936 -~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~~~~~~ 998 (1007)
+++.+.+-....+..-+........+..+.+.+..||..||+.|.|+.=|.+++.++......
T Consensus 446 ~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~~ 509 (534)
T KOG3653|consen 446 LEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWED 509 (534)
T ss_pred HHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCCc
Confidence 112222211111111112222234456789999999999999999999999999988765543
No 30
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1.6e-36 Score=298.63 Aligned_cols=255 Identities=23% Similarity=0.300 Sum_probs=194.8
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhhH--HHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYE--RALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIME 802 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E 802 (1007)
++|...+.+|+|.||.||+|+.. +|+.||||+++.... .......+|++.|+.++||||+.++++|.+.+..-||+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 46888899999999999999854 799999999986532 234567899999999999999999999999999999999
Q ss_pred ecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcc
Q 001838 803 YMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQL 870 (1007)
Q Consensus 803 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~ 870 (1007)
||+. +|+..++.....+...++..++.++.+|++|+ |++.|+|||++ ||+|||+|+........
T Consensus 82 fm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~---H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~ 157 (318)
T KOG0659|consen 82 FMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYC---HSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRI 157 (318)
T ss_pred eccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHH---HhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCcc
Confidence 9986 99999998888899999999999999999999 78899999875 99999999998654433
Q ss_pred cccccccCCcccccccccccC-CCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcC---c------cHHH
Q 001838 871 SMQTQTLATIGYMAPEYGVQG-RVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLP---I------SVME 940 (1007)
Q Consensus 871 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~---~------~~~~ 940 (1007)
. +..+-|.+|+|||.+.+. .|+..+||||.|||+.||+-|.+-|.+..+- ..+....+.... + .+.+
T Consensus 158 ~--~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDi-dQL~~If~~LGTP~~~~WP~~~~lpd 234 (318)
T KOG0659|consen 158 Q--THQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDI-DQLSKIFRALGTPTPDQWPEMTSLPD 234 (318)
T ss_pred c--ccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchH-HHHHHHHHHcCCCCcccCcccccccc
Confidence 2 334679999999988775 5999999999999999999988766543211 111111111110 0 1111
Q ss_pred HhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 941 VIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 941 ~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
..+-.......... .-..+..++++++..++.+||.+|+|+.|++++
T Consensus 235 Y~~~~~~P~~~~~~-lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 235 YVKIQQFPKPPLNN-LFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred HHHHhcCCCCcccc-ccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 11111000000000 111234567999999999999999999999876
No 31
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-36 Score=323.02 Aligned_cols=245 Identities=27% Similarity=0.364 Sum_probs=191.6
Q ss_pred ccccccceecccCceEEEEEEEcC-CceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCC--eeEEEEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDD--FKALIME 802 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--~~~lv~E 802 (1007)
.++...+.||+|+||.||++...+ |...|||.+........+.+.+|+.+|++++|||||+++|.....+ ..++.||
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 456778999999999999998764 9999999997654333577899999999999999999999865554 6899999
Q ss_pred ecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc-------------ccceeecceecCCCCc
Q 001838 803 YMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA-------------HISDFSIAKFLNGQDQ 869 (1007)
Q Consensus 803 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~-------------kl~DFGla~~~~~~~~ 869 (1007)
|+++|+|.+++.+.+..+++..+.+++.||++||+|| |+++|||+|++ ||+|||+++.......
T Consensus 97 y~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~yl---Hs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~ 173 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYL---HSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGT 173 (313)
T ss_pred ccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH---HhCCEeccCcccceEEEeCCCCeEEeccCccccccccccc
Confidence 9999999999987665689999999999999999999 68999999764 8999999997763111
Q ss_pred -ccccccccCCcccccccccccCC-CCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhc
Q 001838 870 -LSMQTQTLATIGYMAPEYGVQGR-VSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLL 947 (1007)
Q Consensus 870 -~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~ 947 (1007)
........||+.|||||++..+. ...++||||+||++.||+||++||.+. .+ ...++-... .
T Consensus 174 ~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-~~---~~~~~~~ig------------~ 237 (313)
T KOG0198|consen 174 KSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-FE---EAEALLLIG------------R 237 (313)
T ss_pred cccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-cc---hHHHHHHHh------------c
Confidence 11223567999999999998643 345999999999999999999999863 11 111111000 0
Q ss_pred cchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 001838 948 SGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLK 991 (1007)
Q Consensus 948 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~ 991 (1007)
.. ..+..++..+.+..+++.+|++.+|++||||.|++++...
T Consensus 238 ~~--~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~ 279 (313)
T KOG0198|consen 238 ED--SLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFL 279 (313)
T ss_pred cC--CCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhh
Confidence 00 0001222345678999999999999999999999998654
No 32
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=9.5e-36 Score=335.32 Aligned_cols=248 Identities=26% Similarity=0.392 Sum_probs=191.5
Q ss_pred cccccccceecccCceEEEEEEE------cCCceEEEEEechhh-HHHHHHHHHHHHHHHhc-CCCceeEEEEEEecCC-
Q 001838 725 TDRFSKNNLLGIGSFGSVYVARL------QDGMEVAVKVFHQRY-ERALKSFQDECEVMKRI-RHRNLVKIISACSNDD- 795 (1007)
Q Consensus 725 ~~~~~~~~~ig~G~~g~Vy~~~~------~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~- 795 (1007)
.++|...+.||+|+||.||+|.. .+++.||||+++... ....+.+.+|++++.++ +|||||+++++|...+
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG 85 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence 46788999999999999999974 235789999997543 33456789999999999 8999999999987654
Q ss_pred eeEEEEEecCCCChhHhhhcCC----------------------------------------------------------
Q 001838 796 FKALIMEYMPNGSLENRLYSGT---------------------------------------------------------- 817 (1007)
Q Consensus 796 ~~~lv~E~~~~gsL~~~l~~~~---------------------------------------------------------- 817 (1007)
..++|||||++|+|.+++....
T Consensus 86 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (338)
T cd05102 86 PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDD 165 (338)
T ss_pred ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccc
Confidence 6899999999999999986421
Q ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcccccccccCCccc
Q 001838 818 ---CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGY 882 (1007)
Q Consensus 818 ---~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~~~~~~gt~~y 882 (1007)
..+++..+.+++.||++||+|| |+.+|+|||++ ||+|||+++...............+++.|
T Consensus 166 ~~~~~l~~~~~~~~~~qi~~aL~~L---H~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y 242 (338)
T cd05102 166 LWKSPLTMEDLICYSFQVARGMEFL---ASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKW 242 (338)
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHH---HHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccc
Confidence 2367788899999999999999 57899999774 89999999876433322222334567889
Q ss_pred ccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhhHHHHHHHH
Q 001838 883 MAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYFAAKEQSL 961 (1007)
Q Consensus 883 ~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 961 (1007)
+|||++....++.++|||||||++|||++ |+.||......+. ...... +.... ..+...+
T Consensus 243 ~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~-~~~~~~-----------~~~~~-------~~~~~~~ 303 (338)
T cd05102 243 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEE-FCQRLK-----------DGTRM-------RAPENAT 303 (338)
T ss_pred cCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHH-HHHHHh-----------cCCCC-------CCCCCCC
Confidence 99999988899999999999999999997 9999975322111 110000 00000 0011224
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHH
Q 001838 962 LSILNLATECTIESPGKRINAREIVTGLLKIRD 994 (1007)
Q Consensus 962 ~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~~ 994 (1007)
.++.+++.+||+.||++|||+.|+++.|+++..
T Consensus 304 ~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 304 PEIYRIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 468899999999999999999999999998764
No 33
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-36 Score=328.06 Aligned_cols=241 Identities=26% Similarity=0.421 Sum_probs=198.3
Q ss_pred cccccceecccCceEEEEEEEcC-CceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecC
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMP 805 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~ 805 (1007)
+....+++|-|-||.||.|.|+. .-.||||.++.... ..++|..|+.+|+.++|||+|+++|+|..+..+|||.|||.
T Consensus 268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtM-eveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~ 346 (1157)
T KOG4278|consen 268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMC 346 (1157)
T ss_pred heeeeeccCCCcccceeeeeeeccceeeehhhhhhcch-hHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEeccc
Confidence 44556889999999999999874 67899999986543 45889999999999999999999999999999999999999
Q ss_pred CCChhHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCcccc
Q 001838 806 NGSLENRLYSGT-CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLSM 872 (1007)
Q Consensus 806 ~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~~~~ 872 (1007)
+|+|.+||++.. ..++....+.+|.||+.||+|| ..+.+||||+ +||+|||+++++.++ .+..
T Consensus 347 yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYL---EkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgD-TYTA 422 (1157)
T KOG4278|consen 347 YGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGD-TYTA 422 (1157)
T ss_pred CccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHH---HHhhhhhhhhhhhhccccccceEEeeccchhhhhcCC-ceec
Confidence 999999998743 3466667888999999999999 7888999976 499999999999754 3322
Q ss_pred cccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchh
Q 001838 873 QTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEE 951 (1007)
Q Consensus 873 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~ 951 (1007)
.....-...|.|||.+....++.|+|||+|||+|||+.| |..||.+.. +.+ +.+.+.. .
T Consensus 423 HAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGid-----lSq---------VY~LLEk------g 482 (1157)
T KOG4278|consen 423 HAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGID-----LSQ---------VYGLLEK------G 482 (1157)
T ss_pred ccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCcc-----HHH---------HHHHHhc------c
Confidence 223334668999999999999999999999999999998 889987642 111 1222221 2
Q ss_pred hhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHH
Q 001838 952 RYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKI 992 (1007)
Q Consensus 952 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i 992 (1007)
.++..++.|+..+++||+.||+++|++||+++|+-+.++.+
T Consensus 483 yRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtm 523 (1157)
T KOG4278|consen 483 YRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETM 523 (1157)
T ss_pred ccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHH
Confidence 33445667888999999999999999999999999999754
No 34
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-36 Score=326.45 Aligned_cols=241 Identities=24% Similarity=0.384 Sum_probs=203.0
Q ss_pred cccceecccCceEEEEEEEcC-----CceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEE
Q 001838 729 SKNNLLGIGSFGSVYVARLQD-----GMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIME 802 (1007)
Q Consensus 729 ~~~~~ig~G~~g~Vy~~~~~~-----g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E 802 (1007)
...+.||+|-||.||+|.+.+ ...||||..+... ....+.|..|..+|++++|||||+++|+|.+. ..|+|||
T Consensus 392 tl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~-P~WivmE 470 (974)
T KOG4257|consen 392 TLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PMWIVME 470 (974)
T ss_pred cHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc-ceeEEEe
Confidence 446889999999999998543 2359999998643 45578899999999999999999999999865 5899999
Q ss_pred ecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcc
Q 001838 803 YMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQL 870 (1007)
Q Consensus 803 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~ 870 (1007)
.++.|.|.+||......++......++.||+.||.|| ++.+.||||++ |++|||+++.+.++..+
T Consensus 471 L~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYL---eSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yY 547 (974)
T KOG4257|consen 471 LAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYL---ESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYY 547 (974)
T ss_pred cccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHH---HhhchhhhhhhhhheeecCcceeeecccchhhhccccchh
Confidence 9999999999998888899999999999999999999 78999999885 89999999999766555
Q ss_pred cccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccc
Q 001838 871 SMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSG 949 (1007)
Q Consensus 871 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~ 949 (1007)
.. +...-...|||||.+.-.+++.++|||-|||.+||+++ |..||.+....++ ...-.
T Consensus 548 ka-S~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDV--------------------I~~iE 606 (974)
T KOG4257|consen 548 KA-SRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDV--------------------IGHIE 606 (974)
T ss_pred hc-cccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccce--------------------EEEec
Confidence 43 23445678999999999999999999999999999986 9999986433221 11112
Q ss_pred hhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHH
Q 001838 950 EERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKIRD 994 (1007)
Q Consensus 950 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~~ 994 (1007)
.+.+.+.++.|+..++.++.+||.++|.+||.+.|+...|..|..
T Consensus 607 nGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 607 NGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred CCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 233445567788899999999999999999999999999999877
No 35
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-35 Score=309.09 Aligned_cols=250 Identities=23% Similarity=0.324 Sum_probs=195.5
Q ss_pred cccccccceecccCceEEEEEEE-cCCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEE
Q 001838 725 TDRFSKNNLLGIGSFGSVYVARL-QDGMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIME 802 (1007)
Q Consensus 725 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E 802 (1007)
.+.|+..+.||.|..++||+|+. +.+..||||++.-.. ....+.+++|+..|+.++|||||+++..|..++..|+||.
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp 104 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP 104 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence 35788899999999999999985 468999999998553 3346889999999999999999999999999999999999
Q ss_pred ecCCCChhHhhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCc
Q 001838 803 YMPNGSLENRLYSG-TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQ 869 (1007)
Q Consensus 803 ~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~ 869 (1007)
||.+||+.+.++.. ...+++..+..|.+++++||.|| |.++.||||++ ||+|||.+..+.....
T Consensus 105 fMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YL---H~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~ 181 (516)
T KOG0582|consen 105 FMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYL---HQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGD 181 (516)
T ss_pred hhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHH---HhcCceecccccccEEEcCCCcEEEcCceeeeeecccCc
Confidence 99999999999753 34588889999999999999999 68899999875 8999999877654321
Q ss_pred c-ccc-ccccCCccccccccccc--CCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhh
Q 001838 870 L-SMQ-TQTLATIGYMAPEYGVQ--GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTN 945 (1007)
Q Consensus 870 ~-~~~-~~~~gt~~y~aPE~~~~--~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~ 945 (1007)
. ... ...+||++|||||++.. ..|+.|+|||||||+..||++|..||.......+-+... +...|.......|
T Consensus 182 R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tL-qn~pp~~~t~~~~-- 258 (516)
T KOG0582|consen 182 RQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTL-QNDPPTLLTSGLD-- 258 (516)
T ss_pred eeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHh-cCCCCCcccccCC--
Confidence 1 111 45689999999999543 469999999999999999999999998654322222111 1111111111111
Q ss_pred hccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 946 LLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 946 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
..........+.+++..|+++||++|||+.++++.
T Consensus 259 --------~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 259 --------KDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred --------hHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 11122234578999999999999999999999875
No 36
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-35 Score=328.48 Aligned_cols=238 Identities=24% Similarity=0.392 Sum_probs=192.3
Q ss_pred HhcccccccceecccCceEEEEEEEc-CCceEEEEEechh----hH-HHHHHHHHHHHHHHhcC-CCceeEEEEEEecCC
Q 001838 723 QATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQR----YE-RALKSFQDECEVMKRIR-HRNLVKIISACSNDD 795 (1007)
Q Consensus 723 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~----~~-~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~ 795 (1007)
...++|...+.||+|+||+||.|+.. +|..||||++++. .. ...+...+|+.++++++ ||||+++++++....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 34568999999999999999999754 6899999987664 11 23456678999999999 999999999999999
Q ss_pred eeEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc-------------ccceeecce
Q 001838 796 FKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA-------------HISDFSIAK 862 (1007)
Q Consensus 796 ~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~-------------kl~DFGla~ 862 (1007)
..|+|||||.||+|.+++.+ ...+.+....+++.|++.|++|+ |+.+|+|||++ ||+|||++.
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisav~y~---H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~ 169 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISAVAYC---HSRGIVHRDLKPENILLDGNEGNLKLSDFGLSA 169 (370)
T ss_pred eEEEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHHHHHH---HhCCEeeCCCCHHHEEecCCCCCEEEecccccc
Confidence 99999999999999999998 45688899999999999999999 78899999875 899999999
Q ss_pred ecCCCCcccccccccCCcccccccccccCC-CC-chhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHH
Q 001838 863 FLNGQDQLSMQTQTLATIGYMAPEYGVQGR-VS-TRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVME 940 (1007)
Q Consensus 863 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 940 (1007)
.... ........+||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||++..... +.. .
T Consensus 170 ~~~~--~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~--l~~---k-------- 234 (370)
T KOG0583|consen 170 ISPG--EDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPN--LYR---K-------- 234 (370)
T ss_pred ccCC--CCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHH--HHH---H--------
Confidence 8741 112335678999999999999877 85 78999999999999999999999722111 110 0
Q ss_pred HhhhhhccchhhhHHHHHHH-HHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001838 941 VIDTNLLSGEERYFAAKEQS-LLSILNLATECTIESPGKRINAREIVT 987 (1007)
Q Consensus 941 ~~d~~~~~~~~~~~~~~~~~-~~~~~~l~~~cl~~~p~~Rpt~~evl~ 987 (1007)
+ .... ...+... ..++.+++.+|++.||.+|+|+.||++
T Consensus 235 -i----~~~~---~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~ 274 (370)
T KOG0583|consen 235 -I----RKGE---FKIPSYLLSPEARSLIEKMLVPDPSTRITLLEILE 274 (370)
T ss_pred -H----hcCC---ccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhh
Confidence 0 0000 0011112 456899999999999999999999993
No 37
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=7.1e-35 Score=318.81 Aligned_cols=248 Identities=21% Similarity=0.280 Sum_probs=191.9
Q ss_pred cccccHHHHHHhcccccccceecccCceEEEEEEEcCCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeEEEE
Q 001838 713 IRRFSYHELLQATDRFSKNNLLGIGSFGSVYVARLQDGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIIS 789 (1007)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~ 789 (1007)
.+.++.+++.. .....||+|++|.||+|.+ +|+.||||+++... ....+.|.+|++++++++|||||+++|
T Consensus 12 ~~~i~~~~i~~-----~~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g 85 (283)
T PHA02988 12 IKCIESDDIDK-----YTSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYG 85 (283)
T ss_pred ceecCHHHcCC-----CCCeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEee
Confidence 45566666632 2246799999999999998 58999999997543 223577889999999999999999999
Q ss_pred EEec----CCeeEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------
Q 001838 790 ACSN----DDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------ 853 (1007)
Q Consensus 790 ~~~~----~~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------ 853 (1007)
++.+ ....++|||||++|+|.+++.... .+++....+++.|++.|+.|||. ..+++||+++
T Consensus 86 ~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lH~--~~~~~Hrdlkp~nill~~~~~~ 162 (283)
T PHA02988 86 FIIDIVDDLPRLSLILEYCTRGYLREVLDKEK-DLSFKTKLDMAIDCCKGLYNLYK--YTNKPYKNLTSVSFLVTENYKL 162 (283)
T ss_pred eEEecccCCCceEEEEEeCCCCcHHHHHhhCC-CCChhHHHHHHHHHHHHHHHHHh--cCCCCCCcCChhhEEECCCCcE
Confidence 9876 346899999999999999998654 58899999999999999999962 3467798764
Q ss_pred ccceeecceecCCCCcccccccccCCccccccccccc--CCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHH
Q 001838 854 HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQ--GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVN 931 (1007)
Q Consensus 854 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~ 931 (1007)
||+|||+++...... ....|+..|+|||++.+ ..++.++|||||||++|||++|+.||......+ +...+.
T Consensus 163 kl~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~--~~~~i~ 235 (283)
T PHA02988 163 KIICHGLEKILSSPP-----FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKE--IYDLII 235 (283)
T ss_pred EEcccchHhhhcccc-----ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHH--HHHHHH
Confidence 899999998654321 23468899999999876 679999999999999999999999998532111 111110
Q ss_pred hhcCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHH
Q 001838 932 DLLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKIR 993 (1007)
Q Consensus 932 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~ 993 (1007)
. . ... ...+..++.++.+++.+||+.||++|||++|+++.|+.++
T Consensus 236 ~-----------~----~~~--~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 236 N-----------K----NNS--LKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred h-----------c----CCC--CCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 0 0 000 0001123456899999999999999999999999999875
No 38
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-36 Score=320.03 Aligned_cols=251 Identities=27% Similarity=0.344 Sum_probs=201.8
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEe
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEY 803 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~ 803 (1007)
..|...+.||+|+||.||||... +++.||+|++.-.. +...+..++|+.++.+++|+||.++||.|..+..++++|||
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey 92 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY 92 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence 35777789999999999999865 68999999998654 44567889999999999999999999999999999999999
Q ss_pred cCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCccc
Q 001838 804 MPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLS 871 (1007)
Q Consensus 804 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~ 871 (1007)
|.||++.+.++.+.. +++....-|++++..|+.|| |..+.+|||++ |++|||.+..+.....
T Consensus 93 ~~gGsv~~lL~~~~~-~~E~~i~~ilre~l~~l~yl---H~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~-- 166 (467)
T KOG0201|consen 93 CGGGSVLDLLKSGNI-LDEFEIAVILREVLKGLDYL---HSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVK-- 166 (467)
T ss_pred hcCcchhhhhccCCC-CccceeeeehHHHHHHhhhh---hhcceecccccccceeEeccCcEEEEecceeeeeechhh--
Confidence 999999999986543 46666777899999999999 67788999764 8999999998764322
Q ss_pred ccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchh
Q 001838 872 MQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEE 951 (1007)
Q Consensus 872 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~ 951 (1007)
.....+||+.|||||++....|+.|+||||+|++.+||++|.+|+.+......- ..+|.....
T Consensus 167 rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvl------flIpk~~PP----------- 229 (467)
T KOG0201|consen 167 RRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVL------FLIPKSAPP----------- 229 (467)
T ss_pred ccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEE------EeccCCCCC-----------
Confidence 225678999999999999889999999999999999999999999875431110 001111000
Q ss_pred hhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH-----------HHHHHHHhhhcccc
Q 001838 952 RYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG-----------LLKIRDTLVKSVGM 1002 (1007)
Q Consensus 952 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~-----------L~~i~~~~~~~~~~ 1002 (1007)
.........+.+++..|+.++|+.||+|.+++++ |.++-+++++|..+
T Consensus 230 ---~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~a~k~s~L~~~i~r~~~~~~~ 288 (467)
T KOG0201|consen 230 ---RLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKRAKKTSELKELIDRYKRWRVK 288 (467)
T ss_pred ---ccccccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHhcCCchHHHHHHHHHHHHhhc
Confidence 0111234568899999999999999999999985 66666677777654
No 39
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-35 Score=318.32 Aligned_cols=242 Identities=25% Similarity=0.397 Sum_probs=196.0
Q ss_pred HHhcccccccceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhc-CCCceeEEEEEEecCCe
Q 001838 722 LQATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRI-RHRNLVKIISACSNDDF 796 (1007)
Q Consensus 722 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~ 796 (1007)
.+...+|..++.||+|+|++||+|+.. +++++|||++.++. ++..+-...|-++|.++ .||.||+|+..|.++..
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s 148 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES 148 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence 334567888999999999999999855 69999999998764 33345567899999999 79999999999999999
Q ss_pred eEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceec
Q 001838 797 KALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFL 864 (1007)
Q Consensus 797 ~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~ 864 (1007)
.|+|+||+++|+|.++|++-+ .+++.-...+|.+|+.|++|| |+.+|||||++ ||+|||-|+.+
T Consensus 149 LYFvLe~A~nGdll~~i~K~G-sfde~caR~YAAeIldAleyl---H~~GIIHRDlKPENILLd~dmhikITDFGsAK~l 224 (604)
T KOG0592|consen 149 LYFVLEYAPNGDLLDLIKKYG-SFDETCARFYAAEILDALEYL---HSNGIIHRDLKPENILLDKDGHIKITDFGSAKIL 224 (604)
T ss_pred eEEEEEecCCCcHHHHHHHhC-cchHHHHHHHHHHHHHHHHHH---HhcCceeccCChhheeEcCCCcEEEeeccccccC
Confidence 999999999999999998764 488888888999999999999 79999999886 89999999988
Q ss_pred CCCCcc-----------cccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhh
Q 001838 865 NGQDQL-----------SMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDL 933 (1007)
Q Consensus 865 ~~~~~~-----------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~ 933 (1007)
.+.... ....+.+||..|.+||++..+..++.+|+|+||||+|.|++|++||.... +..+
T Consensus 225 ~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~N--eyli------- 295 (604)
T KOG0592|consen 225 SPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAAN--EYLI------- 295 (604)
T ss_pred ChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCcccc--HHHH-------
Confidence 542111 11145789999999999999999999999999999999999999998642 1111
Q ss_pred cCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 934 LPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 934 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
...+++-.. +.++..++.+.+|+.+.|..||.+|+|+.||-++
T Consensus 296 ----FqkI~~l~y--------~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 296 ----FQKIQALDY--------EFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred ----HHHHHHhcc--------cCCCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence 111111111 1112223568999999999999999999888665
No 40
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=2e-35 Score=299.45 Aligned_cols=256 Identities=23% Similarity=0.269 Sum_probs=189.6
Q ss_pred cccccccceecccCceEEEEEEEc-CCceEEEEEechhhH--HHHHHHHHHHHHHHhcCCCceeEEEEEEecC--CeeEE
Q 001838 725 TDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYE--RALKSFQDECEVMKRIRHRNLVKIISACSND--DFKAL 799 (1007)
Q Consensus 725 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~l 799 (1007)
.+.|+..+.|++|+||.||+|+.+ +++.||+|+++...+ ..--...+||.+|.+++|||||.+..+.... +..|+
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~ 154 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYI 154 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeee
Confidence 345777899999999999999965 689999999975532 1122457899999999999999999987643 47999
Q ss_pred EEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCC
Q 001838 800 IMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQ 867 (1007)
Q Consensus 800 v~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~ 867 (1007)
|||||+. +|...+..-...+...++..++.|+++|++|| |...|+|||++ ||+|||+||.+...
T Consensus 155 VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~l---H~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp 230 (419)
T KOG0663|consen 155 VMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHL---HDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSP 230 (419)
T ss_pred eHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHH---hhceeEecccchhheeeccCCcEEecccchhhhhcCC
Confidence 9999987 99999987766788899999999999999999 67899999875 89999999987543
Q ss_pred CcccccccccCCcccccccccccCC-CCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhc-C-ccHH-----
Q 001838 868 DQLSMQTQTLATIGYMAPEYGVQGR-VSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLL-P-ISVM----- 939 (1007)
Q Consensus 868 ~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~-~-~~~~----- 939 (1007)
....+..+-|.+|+|||.+.+.+ |++.+|+||+|||+.||+++++-|.+...-+ .+.+.+.... | +..-
T Consensus 231 --~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~d-Ql~~If~llGtPte~iwpg~~~ 307 (419)
T KOG0663|consen 231 --LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEID-QLDKIFKLLGTPSEAIWPGYSE 307 (419)
T ss_pred --cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHH-HHHHHHHHhCCCccccCCCccc
Confidence 23346677899999999988764 9999999999999999999999887532211 1111111111 1 0000
Q ss_pred -HHhhhhhcc-----chhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 940 -EVIDTNLLS-----GEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 940 -~~~d~~~~~-----~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
..+...-.. .....+.... ....-++|+...+.+||++|.||.|.++.
T Consensus 308 lp~~k~~~f~~~pyn~lr~kF~~~~-lse~g~~Lln~llt~dP~kR~tA~~~L~h 361 (419)
T KOG0663|consen 308 LPAVKKMTFSEHPYNNLRKKFGALS-LSEQGFDLLNKLLTYDPGKRITAEDGLKH 361 (419)
T ss_pred cchhhccccCCCCchhhhhhccccc-cchhHHHHHHHHhccCccccccHHHhhcc
Confidence 000000000 0000111110 23567899999999999999999998864
No 41
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-37 Score=296.66 Aligned_cols=240 Identities=21% Similarity=0.319 Sum_probs=193.2
Q ss_pred cccccccceecccCceEEEEEEEc-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEE
Q 001838 725 TDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY--ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIM 801 (1007)
Q Consensus 725 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 801 (1007)
++.|+..+.||+|.|+.||++... +|+.+|+|++.... ....+.+.+|+.|-+.++|||||++.+.+.+.+..|+|+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 467888899999999999999754 69999999886432 234577889999999999999999999999999999999
Q ss_pred EecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc---------------ccceeecceecCC
Q 001838 802 EYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA---------------HISDFSIAKFLNG 866 (1007)
Q Consensus 802 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~---------------kl~DFGla~~~~~ 866 (1007)
|+|.||+|..-+-.+ ...++..+-.++.||++||+|+ |.++|||||++ |++|||+|..+.+
T Consensus 90 e~m~G~dl~~eIV~R-~~ySEa~aSH~~rQiLeal~yC---H~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~ 165 (355)
T KOG0033|consen 90 DLVTGGELFEDIVAR-EFYSEADASHCIQQILEALAYC---HSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVND 165 (355)
T ss_pred ecccchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH---HhcCceeccCChhheeeeeccCCCceeecccceEEEeCC
Confidence 999999997655433 3467777888999999999999 78999999874 8999999998863
Q ss_pred CCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhh
Q 001838 867 QDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNL 946 (1007)
Q Consensus 867 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~ 946 (1007)
. ....+.+|||+|||||++...+|+..+|||+.|||||-|+.|++||.+.... ++.+.+.
T Consensus 166 g---~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~--------------rlye~I~--- 225 (355)
T KOG0033|consen 166 G---EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH--------------RLYEQIK--- 225 (355)
T ss_pred c---cccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHH--------------HHHHHHh---
Confidence 2 3346678999999999999999999999999999999999999999763211 1111111
Q ss_pred ccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 947 LSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 947 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
........+..+...++..+|+++|+..||++|.|+.|++++
T Consensus 226 ~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~H 267 (355)
T KOG0033|consen 226 AGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKH 267 (355)
T ss_pred ccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCC
Confidence 111111111223345678999999999999999999998875
No 42
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-37 Score=352.00 Aligned_cols=484 Identities=29% Similarity=0.364 Sum_probs=393.7
Q ss_pred EEEcCCCCCCCCCCccccCcccCcEEeccCcccCCcchhhhhhcCCCCeecccCcccCCCCchhHhhcCCCCcEEEccCc
Q 001838 96 TLDLSHNKLSGNIPSSIFNMHTLKLLDFRDNQLFGSLSSFIFNMSSMLGIDLSINRFSGELPANICKNLPNLKKLLLGRN 175 (1007)
Q Consensus 96 ~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~ip~~~~~~l~~L~~L~Ls~N 175 (1007)
.+|+|...+. .||..+..-..|+.|++++|.+-..+-.+...--.|+.||||+|+++ ..|..+. .+..|+.|+++.|
T Consensus 2 ~vd~s~~~l~-~ip~~i~~~~~~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it-~l~~L~~ln~s~n 78 (1081)
T KOG0618|consen 2 HVDASDEQLE-LIPEQILNNEALQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQIS-SFPIQIT-LLSHLRQLNLSRN 78 (1081)
T ss_pred CcccccccCc-ccchhhccHHHHHhhhccccccccCchHHhhheeeeEEeeccccccc-cCCchhh-hHHHHhhcccchh
Confidence 4677888887 78888777777999999999986655445544444999999999997 8888887 6899999999999
Q ss_pred cccccCCccccCCCCCcEEEcccccCCCCCCcccccccccceEEcccCcCCCCCCcccCCccccceeeccCccccccccc
Q 001838 176 MFHGKIPSTLSKCKQLEGLYLRFNNLSGAIPKEIGNLTKLKDIILNDNELRGEIPQEMGNLPYLVRLTLATNNLVGVVPF 255 (1007)
Q Consensus 176 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 255 (1007)
.|. ..|.+.+++.+|++|.|.+|.+. ..|.++..+.+|+.|+++.|++. .+|..+..+..++.+..++|......+.
T Consensus 79 ~i~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~lg~ 155 (1081)
T KOG0618|consen 79 YIR-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAASNNEKIQRLGQ 155 (1081)
T ss_pred hHh-hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccchhccC-CCchhHHhhhHHHHHhhhcchhhhhhcc
Confidence 998 77888999999999999999998 78999999999999999999998 8899999999999999999933222222
Q ss_pred cccCCCCCCeEEcccccccCcCCchhhcCCCCCc-EEeccCCCCCCCCCccccccCCCCEEEecCCCcCCCCCccccccc
Q 001838 256 TIFNMSTLKKLSLLENTLWGSLPSRIDLSLPNVE-FLNLGTNRFSGNIPSSITNASKLTVFQLRGNSFSGFIPNTIGNLR 334 (1007)
Q Consensus 256 ~~~~l~~L~~L~L~~N~l~~~lp~~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 334 (1007)
...+.+++..|.+.+.++..+. +++ .|+|.+|++.. -.+.++.+|+.+....|+++... -..+
T Consensus 156 -----~~ik~~~l~~n~l~~~~~~~i~----~l~~~ldLr~N~~~~---~dls~~~~l~~l~c~rn~ls~l~----~~g~ 219 (1081)
T KOG0618|consen 156 -----TSIKKLDLRLNVLGGSFLIDIY----NLTHQLDLRYNEMEV---LDLSNLANLEVLHCERNQLSELE----ISGP 219 (1081)
T ss_pred -----ccchhhhhhhhhcccchhcchh----hhheeeecccchhhh---hhhhhccchhhhhhhhcccceEE----ecCc
Confidence 2288889988888877776554 334 49999998872 34667888999999999887432 2457
Q ss_pred ccccccccccccccCCCCccccccccccccccEEEccCCCCCCCCCCCccccccccceeeeccccccccCChhhhccCCC
Q 001838 335 NLEFLNIADNYLTSSTPELSFLSSLTNCQKIRVLILAGNPLDGILPSSIGNLSISLERFQMFNCRISGKIPQVISNLSNL 414 (1007)
Q Consensus 335 ~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~l~~L~l~~n~l~~~~p~~~~~l~~L 414 (1007)
+|+.|+.++|.++...+. .--.+++++++++|++++. |++++.+. +++.+...+|+++ .+|..+....+|
T Consensus 220 ~l~~L~a~~n~l~~~~~~-------p~p~nl~~~dis~n~l~~l-p~wi~~~~-nle~l~~n~N~l~-~lp~ri~~~~~L 289 (1081)
T KOG0618|consen 220 SLTALYADHNPLTTLDVH-------PVPLNLQYLDISHNNLSNL-PEWIGACA-NLEALNANHNRLV-ALPLRISRITSL 289 (1081)
T ss_pred chheeeeccCcceeeccc-------cccccceeeecchhhhhcc-hHHHHhcc-cceEecccchhHH-hhHHHHhhhhhH
Confidence 889999999998854332 1224688899999999864 58888887 8999999999994 788888888999
Q ss_pred cEEEccCCeeccccchhhhhccccCccccCCCccCCCCchhhhccc-ccceeecccccccCCCCCCCCCcccCceeecCC
Q 001838 415 LLLDLGGNKLTGSIPVTFSRLLNLQGLGLAFNKLARSIPDEICHLA-KLDKLILHGNKFSGAIPSCSGNLTSLRALYLGS 493 (1007)
Q Consensus 415 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 493 (1007)
+.|++.+|.+. -+|....+++.|++|+|..|+|....+..+.-+. +|+.|+.+.|+++...-..-..+..|+.|++.+
T Consensus 290 ~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~Lylan 368 (1081)
T KOG0618|consen 290 VSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLAN 368 (1081)
T ss_pred HHHHhhhhhhh-hCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhc
Confidence 99999999998 5677777889999999999999654443333333 378888888888743322234577899999999
Q ss_pred cccccCCCcccccccccccccCCCCCcCCCCccccccccccceEeCccccCCCCccccccCCCCccEEeccccccccccC
Q 001838 494 NRFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRNNLSGDIPITIGGLKNLQKLFLANNRLEGPIP 573 (1007)
Q Consensus 494 N~l~~~~p~~~~~l~~L~~Ldls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 573 (1007)
|.++...-..+.+.+.|+.|+|++|++.......+.++..|++|+||+|.++ .+|..+..++.|++|...+|+|. ..|
T Consensus 369 N~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP 446 (1081)
T KOG0618|consen 369 NHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP 446 (1081)
T ss_pred CcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech
Confidence 9999887778888999999999999999777778899999999999999999 89999999999999999999998 567
Q ss_pred ccCcCCCCCCEEECCCCcccccCCcchhhhcCCCeeeCcCCc
Q 001838 574 ESFSGLSSLEILDLSKNKISGVIPTSLEKLLYLKKLNLSFNK 615 (1007)
Q Consensus 574 ~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~ls~N~ 615 (1007)
.+..++.|+.+|+|.|+|+...-.....-++|++|||++|.
T Consensus 447 -e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 447 -ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNT 487 (1081)
T ss_pred -hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCc
Confidence 78999999999999999996543333333899999999997
No 43
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-35 Score=304.31 Aligned_cols=260 Identities=22% Similarity=0.280 Sum_probs=196.0
Q ss_pred HHhcccccccceecccCceEEEEEEEc-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeEEEEEEec-----
Q 001838 722 LQATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY--ERALKSFQDECEVMKRIRHRNLVKIISACSN----- 793 (1007)
Q Consensus 722 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----- 793 (1007)
.....+|...+.||+|+||.|+.|... +|+.||||++.... .-..++..+|+++++.++|+|||.+.+.+..
T Consensus 18 ~~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~ 97 (359)
T KOG0660|consen 18 FEIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDK 97 (359)
T ss_pred EeccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccc
Confidence 344566777899999999999999865 69999999998443 4456788999999999999999999999876
Q ss_pred CCeeEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecc
Q 001838 794 DDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIA 861 (1007)
Q Consensus 794 ~~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla 861 (1007)
-+..|+|+|+|+ -+|.+.++.+.. ++......++.|+++||.|+ |+.+|+|||++ ||+|||+|
T Consensus 98 f~DvYiV~elMe-tDL~~iik~~~~-L~d~H~q~f~YQiLrgLKyi---HSAnViHRDLKPsNll~n~~c~lKI~DFGLA 172 (359)
T KOG0660|consen 98 FNDVYLVFELME-TDLHQIIKSQQD-LTDDHAQYFLYQILRGLKYI---HSANVIHRDLKPSNLLLNADCDLKICDFGLA 172 (359)
T ss_pred cceeEEehhHHh-hHHHHHHHcCcc-ccHHHHHHHHHHHHHhcchh---hcccccccccchhheeeccCCCEEeccccce
Confidence 246899999995 489999987653 78888888999999999999 78999999875 99999999
Q ss_pred eecCCCCcccccccccCCccccccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhc---Ccc
Q 001838 862 KFLNGQDQLSMQTQTLATIGYMAPEYGVQ-GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLL---PIS 937 (1007)
Q Consensus 862 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~---~~~ 937 (1007)
+...........+..+.|.+|.|||++.. ..|+..+||||.|||+.||++|++-|.+.. .......+.... ++.
T Consensus 173 R~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d--~v~Ql~lI~~~lGtP~~e 250 (359)
T KOG0660|consen 173 RYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKD--YVHQLQLILELLGTPSEE 250 (359)
T ss_pred eeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCc--hHHHHHHHHHhcCCCCHH
Confidence 98864423334467789999999998765 569999999999999999999999887532 122222221111 111
Q ss_pred HHHHhh---------hhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 938 VMEVID---------TNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 938 ~~~~~d---------~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
....+. .............-+.....+++|+.+||..||.+|+|++|++++
T Consensus 251 ~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 251 DLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred HHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 111111 100111111111122334578999999999999999999999876
No 44
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-35 Score=325.68 Aligned_cols=237 Identities=26% Similarity=0.409 Sum_probs=195.0
Q ss_pred cceecccCceEEEEEEEcC--C--ceEEEEEechhhH-HHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecC
Q 001838 731 NNLLGIGSFGSVYVARLQD--G--MEVAVKVFHQRYE-RALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMP 805 (1007)
Q Consensus 731 ~~~ig~G~~g~Vy~~~~~~--g--~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~ 805 (1007)
.+.||+|+||+|++|.|+. | ..||||.++.... ..+.+|.+|+.+|.+++|||+|+|||+..+ ....+|||+++
T Consensus 115 ~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELap 193 (1039)
T KOG0199|consen 115 YELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELAP 193 (1039)
T ss_pred HHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhcc
Confidence 5789999999999998763 4 3689999986653 367899999999999999999999999987 66889999999
Q ss_pred CCChhHhhhc-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCC-ccc
Q 001838 806 NGSLENRLYS-GTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQD-QLS 871 (1007)
Q Consensus 806 ~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~-~~~ 871 (1007)
.|+|.+.|++ ....+-......++.|||.||.|| .+++.||||++ ||+|||+.+-+...+ .+.
T Consensus 194 lGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YL---eskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yv 270 (1039)
T KOG0199|consen 194 LGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYL---ESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYV 270 (1039)
T ss_pred cchHHHHHhhccccceeHHHHHHHHHHHHHHHHHH---hhhhhhhhhhhhhhheecccceeeeecccceeccCCCCcceE
Confidence 9999999987 455677888999999999999999 89999999874 999999999886543 343
Q ss_pred ccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccch
Q 001838 872 MQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGE 950 (1007)
Q Consensus 872 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~ 950 (1007)
+.....-.+.|.|||.+...+++.++|||+|||++|||+| |+.||.+... ..+.+.+|.
T Consensus 271 m~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g--------------~qIL~~iD~------ 330 (1039)
T KOG0199|consen 271 MAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRG--------------IQILKNIDA------ 330 (1039)
T ss_pred ecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCH--------------HHHHHhccc------
Confidence 4444445678999999999999999999999999999998 7899876421 122333331
Q ss_pred hhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 001838 951 ERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLK 991 (1007)
Q Consensus 951 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~ 991 (1007)
..+.+.++.|++++++++..||..+|++|||+..+.+.+-.
T Consensus 331 ~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~~l 371 (1039)
T KOG0199|consen 331 GERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVL 371 (1039)
T ss_pred cccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHHH
Confidence 12233445678899999999999999999999999866543
No 45
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1.5e-34 Score=328.90 Aligned_cols=245 Identities=26% Similarity=0.372 Sum_probs=190.4
Q ss_pred cccccccceecccCceEEEEEEE------cCCceEEEEEechhh-HHHHHHHHHHHHHHHhc-CCCceeEEEEEEecCCe
Q 001838 725 TDRFSKNNLLGIGSFGSVYVARL------QDGMEVAVKVFHQRY-ERALKSFQDECEVMKRI-RHRNLVKIISACSNDDF 796 (1007)
Q Consensus 725 ~~~~~~~~~ig~G~~g~Vy~~~~------~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~ 796 (1007)
.++|+..+.||+|+||+||+|+. .++..||||+++... ....+.+.+|+.+++.+ +|||||+++++|.+.+.
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~ 113 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP 113 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence 35688899999999999999963 236689999997542 33456788999999999 89999999999999999
Q ss_pred eEEEEEecCCCChhHhhhcCC-----------------------------------------------------------
Q 001838 797 KALIMEYMPNGSLENRLYSGT----------------------------------------------------------- 817 (1007)
Q Consensus 797 ~~lv~E~~~~gsL~~~l~~~~----------------------------------------------------------- 817 (1007)
.++|||||++|+|.+++....
T Consensus 114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (375)
T cd05104 114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS 193 (375)
T ss_pred ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence 999999999999999886421
Q ss_pred ---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcc
Q 001838 818 ---------------CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQL 870 (1007)
Q Consensus 818 ---------------~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~ 870 (1007)
..+++..+.+++.||++||+|| |+.+|+|||++ ||+|||+++........
T Consensus 194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~l---H~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 270 (375)
T cd05104 194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNY 270 (375)
T ss_pred ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeccCCchhhEEEECCCcEEEecCccceeccCcccc
Confidence 1467888999999999999999 56789999764 89999999876543322
Q ss_pred cccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccc
Q 001838 871 SMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSG 949 (1007)
Q Consensus 871 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~ 949 (1007)
.......++..|+|||++....++.++|||||||++|||++ |..||....... ...+++... ....
T Consensus 271 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~-~~~~~~~~~------------~~~~ 337 (375)
T cd05104 271 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS-KFYKMIKEG------------YRML 337 (375)
T ss_pred cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH-HHHHHHHhC------------ccCC
Confidence 22223345678999999998899999999999999999998 888987532211 111221110 0000
Q ss_pred hhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 001838 950 EERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLK 991 (1007)
Q Consensus 950 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~ 991 (1007)
.+...+.++.+++.+||+.||++||||.||+++|++
T Consensus 338 ------~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 338 ------SPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred ------CCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence 001123468899999999999999999999999986
No 46
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-34 Score=288.43 Aligned_cols=224 Identities=25% Similarity=0.329 Sum_probs=184.5
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIM 801 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 801 (1007)
++|+..+.+|.|+||+|..++.+ +|..+|+|+++++. -+..+...+|..+|+.+.||.+|++++.|.+.+..|+||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 35777899999999999999976 58999999998764 345567789999999999999999999999999999999
Q ss_pred EecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCc
Q 001838 802 EYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQ 869 (1007)
Q Consensus 802 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~ 869 (1007)
||++||.|..++++.+ .++...+.-+|.||+.|++|| |+..|++||++ ||+|||+|+...+.
T Consensus 124 eyv~GGElFS~Lrk~~-rF~e~~arFYAAeivlAleyl---H~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r-- 197 (355)
T KOG0616|consen 124 EYVPGGELFSYLRKSG-RFSEPHARFYAAEIVLALEYL---HSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR-- 197 (355)
T ss_pred eccCCccHHHHHHhcC-CCCchhHHHHHHHHHHHHHHH---HhcCeeeccCChHHeeeccCCcEEEEeccceEEecCc--
Confidence 9999999999998755 488888888999999999999 78899999876 89999999988543
Q ss_pred ccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccc
Q 001838 870 LSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSG 949 (1007)
Q Consensus 870 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~ 949 (1007)
+-+.+|||.|+|||++....|..++|+|||||++|||+.|.+||.+... ++..++.+...
T Consensus 198 ---T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~-----------------~~iY~KI~~~~ 257 (355)
T KOG0616|consen 198 ---TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP-----------------IQIYEKILEGK 257 (355)
T ss_pred ---EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh-----------------HHHHHHHHhCc
Confidence 2457899999999999999999999999999999999999999986322 11122211111
Q ss_pred hhhhHHHHHHHHHHHHHHHhhcCCCCCCCC
Q 001838 950 EERYFAAKEQSLLSILNLATECTIESPGKR 979 (1007)
Q Consensus 950 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R 979 (1007)
. . .+.....++.+|+...++.|-.+|
T Consensus 258 v-~---fP~~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 258 V-K---FPSYFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred c-c---CCcccCHHHHHHHHHHHhhhhHhh
Confidence 1 0 111223467788888888888888
No 47
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=2.1e-34 Score=327.38 Aligned_cols=247 Identities=25% Similarity=0.391 Sum_probs=190.8
Q ss_pred cccccccceecccCceEEEEEEEc------CCceEEEEEechhh-HHHHHHHHHHHHHHHhc-CCCceeEEEEEEecCCe
Q 001838 725 TDRFSKNNLLGIGSFGSVYVARLQ------DGMEVAVKVFHQRY-ERALKSFQDECEVMKRI-RHRNLVKIISACSNDDF 796 (1007)
Q Consensus 725 ~~~~~~~~~ig~G~~g~Vy~~~~~------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~ 796 (1007)
.++|+..+.||+|+||.||+|+.. ++..||||+++... ....+.+.+|+++++++ +|||||+++++|...+.
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~ 116 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGP 116 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCC
Confidence 357888999999999999999742 24579999997542 34456788999999999 89999999999999999
Q ss_pred eEEEEEecCCCChhHhhhcCC-----------------------------------------------------------
Q 001838 797 KALIMEYMPNGSLENRLYSGT----------------------------------------------------------- 817 (1007)
Q Consensus 797 ~~lv~E~~~~gsL~~~l~~~~----------------------------------------------------------- 817 (1007)
.++|||||++|+|.++++...
T Consensus 117 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (374)
T cd05106 117 VLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSD 196 (374)
T ss_pred eEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccc
Confidence 999999999999999885321
Q ss_pred ----------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCccccccc
Q 001838 818 ----------CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQ 875 (1007)
Q Consensus 818 ----------~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~~~~ 875 (1007)
..+++..+.+++.||+.||+|| |+.+|+|||++ ||+|||+++.............
T Consensus 197 ~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yL---H~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~ 273 (374)
T cd05106 197 SKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFL---ASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGN 273 (374)
T ss_pred ccchhccCCCCCcCHHHHHHHHHHHHHHHHHH---HHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccC
Confidence 1367888899999999999999 57899999774 8999999987643322222223
Q ss_pred ccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhhH
Q 001838 876 TLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYF 954 (1007)
Q Consensus 876 ~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 954 (1007)
..++..|||||++....++.++|||||||++|||++ |+.||....... .... .+........
T Consensus 274 ~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~-~~~~------------~~~~~~~~~~---- 336 (374)
T cd05106 274 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS-KFYK------------MVKRGYQMSR---- 336 (374)
T ss_pred CCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH-HHHH------------HHHcccCccC----
Confidence 345678999999988899999999999999999997 999997532211 1111 1110000000
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHH
Q 001838 955 AAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKIR 993 (1007)
Q Consensus 955 ~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~ 993 (1007)
+...+.++.+++.+||+.||++|||+.||+++|+++.
T Consensus 337 --~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 337 --PDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred --CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 0011346889999999999999999999999999863
No 48
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=7.3e-34 Score=314.98 Aligned_cols=249 Identities=23% Similarity=0.379 Sum_probs=188.6
Q ss_pred ccccccceecccCceEEEEEEEcC-----------------CceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQD-----------------GMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVKI 787 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~~-----------------g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l 787 (1007)
++|...+.||+|+||+||+|.+++ +..||||++.... .....+|.+|++++++++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 578889999999999999997532 3469999987543 3445679999999999999999999
Q ss_pred EEEEecCCeeEEEEEecCCCChhHhhhcCC------------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcee
Q 001838 788 ISACSNDDFKALIMEYMPNGSLENRLYSGT------------------CMLDIFQRLNIMIDVALALEYLHFGHSTPIIH 849 (1007)
Q Consensus 788 ~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~------------------~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH 849 (1007)
++++.+.+..++||||+++|+|.+++.... ..+++..+.+++.|++.||+|| |+.+|+|
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~l---H~~~ivH 161 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYL---SSLNFVH 161 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHH---HHCCccc
Confidence 999999999999999999999999986421 2367788999999999999999 5678999
Q ss_pred cccc------------ccceeecceecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh--CCCC
Q 001838 850 YMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT--GKKP 915 (1007)
Q Consensus 850 ~~~~------------kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt--G~~p 915 (1007)
||++ ||+|||+++...............++..|+|||++....++.++|||||||++|||++ |..|
T Consensus 162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p 241 (304)
T cd05096 162 RDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQP 241 (304)
T ss_pred cCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCC
Confidence 9764 8999999987654333222234456889999999988889999999999999999987 5567
Q ss_pred CCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 001838 916 TDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLL 990 (1007)
Q Consensus 916 ~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~ 990 (1007)
|...... .....+........... . ...++.++..+.+++.+||+.||++||||.||.+.|+
T Consensus 242 ~~~~~~~--~~~~~~~~~~~~~~~~~--------~---~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 242 YGELTDE--QVIENAGEFFRDQGRQV--------Y---LFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred CCcCCHH--HHHHHHHHHhhhccccc--------c---ccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 7653211 11111111100000000 0 0001122456899999999999999999999998886
No 49
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-34 Score=320.71 Aligned_cols=230 Identities=23% Similarity=0.305 Sum_probs=190.5
Q ss_pred cccccccceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcC-CCceeEEEEEEecCCeeEE
Q 001838 725 TDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIR-HRNLVKIISACSNDDFKAL 799 (1007)
Q Consensus 725 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~l 799 (1007)
.++|...+++|+|.||+|+++..+ +++.+|||++++.. ....+..+.|.+|+.-.. ||.++.++.+|.+.++.|.
T Consensus 367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~f 446 (694)
T KOG0694|consen 367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFF 446 (694)
T ss_pred ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEE
Confidence 457888999999999999999976 58899999998764 345677889999988885 9999999999999999999
Q ss_pred EEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCC
Q 001838 800 IMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQ 867 (1007)
Q Consensus 800 v~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~ 867 (1007)
||||+.||++..+.+. ..++..++.-||..|+.||+|| |+++||+||++ ||+|||++|.....
T Consensus 447 vmey~~Ggdm~~~~~~--~~F~e~rarfyaAev~l~L~fL---H~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~ 521 (694)
T KOG0694|consen 447 VMEYVAGGDLMHHIHT--DVFSEPRARFYAAEVVLGLQFL---HENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQ 521 (694)
T ss_pred EEEecCCCcEEEEEec--ccccHHHHHHHHHHHHHHHHHH---HhcCceeeecchhheEEcccCcEEecccccccccCCC
Confidence 9999999995544433 4589999999999999999999 78999999885 99999999975422
Q ss_pred CcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhc
Q 001838 868 DQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLL 947 (1007)
Q Consensus 868 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~ 947 (1007)
...+++.+||+.|||||++.+..|+..+|+|||||++|||+.|+.||.+.. -.+++|..+.
T Consensus 522 --g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gdd-----------------Eee~FdsI~~ 582 (694)
T KOG0694|consen 522 --GDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDD-----------------EEEVFDSIVN 582 (694)
T ss_pred --CCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCC-----------------HHHHHHHHhc
Confidence 234567899999999999999999999999999999999999999998532 1233443332
Q ss_pred cchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCH
Q 001838 948 SGEERYFAAKEQSLLSILNLATECTIESPGKRINA 982 (1007)
Q Consensus 948 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~ 982 (1007)
.... .+...+.+..+++.+.+..+|++|.-+
T Consensus 583 d~~~----yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 583 DEVR----YPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred CCCC----CCCcccHHHHHHHHHHhccCcccccCC
Confidence 2211 122345678999999999999999876
No 50
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.2e-35 Score=320.42 Aligned_cols=236 Identities=24% Similarity=0.334 Sum_probs=193.7
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIM 801 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 801 (1007)
.-|+.++.+|.|+-|.|..|++. +|+.+|||++.+.. ......+.+|+.+|+-+.||||+++++++++..++|+|.
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL 91 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence 45677889999999999999854 79999999997652 223356789999999999999999999999999999999
Q ss_pred EecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCc
Q 001838 802 EYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQ 869 (1007)
Q Consensus 802 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~ 869 (1007)
||+++|.|++++.+++. +...++.+++.||..|+.|+ |.-+|+|||++ ||+|||+|..-.++
T Consensus 92 Eyv~gGELFdylv~kG~-l~e~eaa~ff~QIi~gv~yC---H~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~g-- 165 (786)
T KOG0588|consen 92 EYVPGGELFDYLVRKGP-LPEREAAHFFRQILDGVSYC---HAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPG-- 165 (786)
T ss_pred EecCCchhHHHHHhhCC-CCCHHHHHHHHHHHHHHHHH---hhhcceeccCCchhhhhhcccCEeeeccceeecccCC--
Confidence 99999999999987654 77788889999999999999 56779999875 89999999876543
Q ss_pred ccccccccCCcccccccccccCCC-CchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhcc
Q 001838 870 LSMQTQTLATIGYMAPEYGVQGRV-STRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLS 948 (1007)
Q Consensus 870 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~ 948 (1007)
....+.||++.|.|||++.+.+| +.++||||.|||||.|+||+.||++. ++........ .
T Consensus 166 -klLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDd-----Nir~LLlKV~-------------~ 226 (786)
T KOG0588|consen 166 -KLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDD-----NIRVLLLKVQ-------------R 226 (786)
T ss_pred -ccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCc-----cHHHHHHHHH-------------c
Confidence 23356799999999999999988 56899999999999999999999852 2222111111 0
Q ss_pred chhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 001838 949 GEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGL 989 (1007)
Q Consensus 949 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L 989 (1007)
+ .+..+...+.++.+|+.+|+..||++|.|++||+++-
T Consensus 227 G---~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP 264 (786)
T KOG0588|consen 227 G---VFEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHP 264 (786)
T ss_pred C---cccCCCcCCHHHHHHHHHHhccCccccccHHHHhhCc
Confidence 1 1112234566899999999999999999999999874
No 51
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=2.3e-34 Score=310.87 Aligned_cols=237 Identities=32% Similarity=0.516 Sum_probs=181.4
Q ss_pred ccceecccCceEEEEEEEc-----CCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEe
Q 001838 730 KNNLLGIGSFGSVYVARLQ-----DGMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEY 803 (1007)
Q Consensus 730 ~~~~ig~G~~g~Vy~~~~~-----~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~ 803 (1007)
..+.||.|+||.||+|.+. .+..||||+++... ....+.|.+|++.+++++||||++++|++...+..++||||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 3578999999999999876 26789999996543 44568899999999999999999999999988889999999
Q ss_pred cCCCChhHhhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCcc
Q 001838 804 MPNGSLENRLYSG-TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQL 870 (1007)
Q Consensus 804 ~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~~ 870 (1007)
|++|+|.+++... ...+++..+.+++.|||+||.||| +.+++|+++ +||+|||+++........
T Consensus 83 ~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh---~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~ 159 (259)
T PF07714_consen 83 CPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLH---SNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKY 159 (259)
T ss_dssp -TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHH---HTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSE
T ss_pred cccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999886 567899999999999999999995 567999854 499999999987433333
Q ss_pred cccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccc
Q 001838 871 SMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSG 949 (1007)
Q Consensus 871 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~ 949 (1007)
.......+...|+|||.+....++.++||||||+++||+++ |+.||.+... .++... +.....
T Consensus 160 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~-----~~~~~~---------~~~~~~-- 223 (259)
T PF07714_consen 160 KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDN-----EEIIEK---------LKQGQR-- 223 (259)
T ss_dssp EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCH-----HHHHHH---------HHTTEE--
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccc-----cccccc---------cccccc--
Confidence 33334457789999999988889999999999999999999 7889875311 111111 100000
Q ss_pred hhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 001838 950 EERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGL 989 (1007)
Q Consensus 950 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L 989 (1007)
...+..++..+.+++..||..+|++||||+|+++.|
T Consensus 224 ----~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 224 ----LPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp ----TTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ----ceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 000111244688999999999999999999999986
No 52
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=3.5e-34 Score=309.15 Aligned_cols=240 Identities=23% Similarity=0.337 Sum_probs=191.6
Q ss_pred hcccccccceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEE
Q 001838 724 ATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKAL 799 (1007)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 799 (1007)
..++|+...+||+|+||.||.|+.+ +|..+|+|++++.. ....+....|-.+|....+|.||+++..|.+.+..||
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 4678999999999999999999866 59999999998764 3456778899999999999999999999999999999
Q ss_pred EEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCC-
Q 001838 800 IMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNG- 866 (1007)
Q Consensus 800 v~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~- 866 (1007)
||||.+||++..+|.+.+ .++...+..++.+.+-|++.+ |..++||||++ |++||||++-+..
T Consensus 219 iMEylPGGD~mTLL~~~~-~L~e~~arfYiaE~vlAI~~i---H~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~ 294 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMRKD-TLTEDWARFYIAETVLAIESI---HQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKK 294 (550)
T ss_pred EEEecCCccHHHHHHhcC-cCchHHHHHHHHHHHHHHHHH---HHcCcccccCChhheeecCCCCEeeccccccchhhhh
Confidence 999999999999998765 478888888999999999999 78899999886 8999999964311
Q ss_pred --------------------CCccc-----c-------------------cccccCCcccccccccccCCCCchhhHHHH
Q 001838 867 --------------------QDQLS-----M-------------------QTQTLATIGYMAPEYGVQGRVSTRGDVYSY 902 (1007)
Q Consensus 867 --------------------~~~~~-----~-------------------~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~ 902 (1007)
..... . ....+|||-|||||++.+..|+..+|+||+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSL 374 (550)
T KOG0605|consen 295 HRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSL 374 (550)
T ss_pred hhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHH
Confidence 00000 0 013579999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCccccCc--chHHHHHHhhcCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 001838 903 GIMLMETFTGKKPTDEIFIGE--LSLSRWVNDLLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRI 980 (1007)
Q Consensus 903 Gvil~elltG~~p~~~~~~~~--~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp 980 (1007)
|||+|||+.|.+||......+ ..+..|.....-. .......++.||+.+|+. ||++|.
T Consensus 375 G~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP-------------------~~~~~s~eA~DLI~rll~-d~~~RL 434 (550)
T KOG0605|consen 375 GCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFP-------------------EEVDLSDEAKDLITRLLC-DPENRL 434 (550)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCC-------------------CcCcccHHHHHHHHHHhc-CHHHhc
Confidence 999999999999998654332 2344454332110 011123578999999999 999997
Q ss_pred C---HHHHHH
Q 001838 981 N---AREIVT 987 (1007)
Q Consensus 981 t---~~evl~ 987 (1007)
- +.||-+
T Consensus 435 G~~G~~EIK~ 444 (550)
T KOG0605|consen 435 GSKGAEEIKK 444 (550)
T ss_pred CcccHHHHhc
Confidence 5 455443
No 53
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1.1e-33 Score=322.50 Aligned_cols=249 Identities=24% Similarity=0.378 Sum_probs=193.0
Q ss_pred hcccccccceecccCceEEEEEEEc------CCceEEEEEechhh-HHHHHHHHHHHHHHHhcC-CCceeEEEEEEecCC
Q 001838 724 ATDRFSKNNLLGIGSFGSVYVARLQ------DGMEVAVKVFHQRY-ERALKSFQDECEVMKRIR-HRNLVKIISACSNDD 795 (1007)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~Vy~~~~~------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~ 795 (1007)
..++|.+.+.||+|+||+||+|+.. .+..||||+++... ....+.+.+|+++++++. |||||+++++|.+.+
T Consensus 35 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~ 114 (400)
T cd05105 35 PRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSG 114 (400)
T ss_pred cccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCC
Confidence 3568889999999999999999853 13479999997543 344567999999999996 999999999999999
Q ss_pred eeEEEEEecCCCChhHhhhcCC----------------------------------------------------------
Q 001838 796 FKALIMEYMPNGSLENRLYSGT---------------------------------------------------------- 817 (1007)
Q Consensus 796 ~~~lv~E~~~~gsL~~~l~~~~---------------------------------------------------------- 817 (1007)
..|+|||||++|+|.++++...
T Consensus 115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (400)
T cd05105 115 PIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEI 194 (400)
T ss_pred ceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhh
Confidence 9999999999999999886421
Q ss_pred -------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc-------
Q 001838 818 -------------------------------------CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------- 853 (1007)
Q Consensus 818 -------------------------------------~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------- 853 (1007)
..+++..+.+++.|+++|++|| |+.+|+|++++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~L---H~~~ivH~dikp~Nill~ 271 (400)
T cd05105 195 KEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFL---ASKNCVHRDLAARNVLLA 271 (400)
T ss_pred hhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHH---HhCCeeCCCCChHhEEEe
Confidence 2367788899999999999999 56789999764
Q ss_pred -----ccceeecceecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHH
Q 001838 854 -----HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLS 927 (1007)
Q Consensus 854 -----kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~ 927 (1007)
|++|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||........ ..
T Consensus 272 ~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~-~~ 350 (400)
T cd05105 272 QGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDST-FY 350 (400)
T ss_pred CCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHH-HH
Confidence 8999999987643332222233457788999999988889999999999999999997 9999875322111 11
Q ss_pred HHHHhhcCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHH
Q 001838 928 RWVNDLLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKIRD 994 (1007)
Q Consensus 928 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~~ 994 (1007)
..+. .... ...+...+.++.+++.+||+.+|++|||+.+|+++|+++.+
T Consensus 351 ~~~~------------~~~~------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 351 NKIK------------SGYR------MAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred HHHh------------cCCC------CCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 1000 0000 00111234578999999999999999999999999997643
No 54
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=7.7e-34 Score=311.47 Aligned_cols=238 Identities=20% Similarity=0.295 Sum_probs=187.1
Q ss_pred ccccceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEe
Q 001838 728 FSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEY 803 (1007)
Q Consensus 728 ~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~ 803 (1007)
|+..+.||+|+||+||+|... +|+.||||++.... ......+.+|++++++++|+||+++++++.+.+..++||||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence 677899999999999999864 69999999987543 22334678999999999999999999999999999999999
Q ss_pred cCCCChhHhhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcc
Q 001838 804 MPNGSLENRLYSG-TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQL 870 (1007)
Q Consensus 804 ~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~ 870 (1007)
|++|+|.+++... ...+++..+..++.|++.|++|| |+.+|+|||++ ||+|||+++.......
T Consensus 82 ~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~- 157 (285)
T cd05631 82 MNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDL---QRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGET- 157 (285)
T ss_pred cCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHH---HhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCe-
Confidence 9999999888643 33588999999999999999999 67899999774 7999999987643221
Q ss_pred cccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccch
Q 001838 871 SMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGE 950 (1007)
Q Consensus 871 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~ 950 (1007)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||........ . +.++..+....
T Consensus 158 --~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~-~-------------~~~~~~~~~~~ 221 (285)
T cd05631 158 --VRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVK-R-------------EEVDRRVKEDQ 221 (285)
T ss_pred --ecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchh-H-------------HHHHHHhhccc
Confidence 2345789999999999999999999999999999999999999985322110 0 11111110000
Q ss_pred hhhHHHHHHHHHHHHHHHhhcCCCCCCCCCC-----HHHHHHH
Q 001838 951 ERYFAAKEQSLLSILNLATECTIESPGKRIN-----AREIVTG 988 (1007)
Q Consensus 951 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt-----~~evl~~ 988 (1007)
. ..+.....++.+++.+||+.||++||+ ++|++++
T Consensus 222 ~---~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 222 E---EYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred c---cCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence 0 001122446889999999999999997 7888874
No 55
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=6.5e-34 Score=308.88 Aligned_cols=243 Identities=21% Similarity=0.309 Sum_probs=191.2
Q ss_pred ccccccceecccCceEEEEEEEc----CCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ----DGMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALI 800 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~----~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 800 (1007)
++|+..+.||+|+||.||+|.+. .+..||+|+++... ....+.|.+|+.++++++||||+++++++..++..++|
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 84 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV 84 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence 46888899999999999999753 36789999987643 33456789999999999999999999999999999999
Q ss_pred EEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCC
Q 001838 801 MEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQD 868 (1007)
Q Consensus 801 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~ 868 (1007)
|||+++|+|.+++......+++.+++.++.|++.|++|| |+.+++|||+ .|++|||.+.......
T Consensus 85 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~l---H~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~ 161 (266)
T cd05064 85 TEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYL---SEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEA 161 (266)
T ss_pred EEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH---HHCCEeeccccHhhEEEcCCCcEEECCCcccccccccc
Confidence 999999999999987655689999999999999999999 5778999976 3899999876543221
Q ss_pred cccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhc
Q 001838 869 QLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLL 947 (1007)
Q Consensus 869 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~ 947 (1007)
.. ......++..|+|||++....++.++|||||||++||+++ |+.||...... ...+.+... ..
T Consensus 162 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~--~~~~~~~~~-----------~~- 226 (266)
T cd05064 162 IY-TTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ--DVIKAVEDG-----------FR- 226 (266)
T ss_pred hh-cccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH--HHHHHHHCC-----------CC-
Confidence 11 1122345678999999988999999999999999999775 99999753211 111111100 00
Q ss_pred cchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHH
Q 001838 948 SGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKI 992 (1007)
Q Consensus 948 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i 992 (1007)
.+.+..++..+.+++.+||+.+|++||++.|+.+.|.++
T Consensus 227 ------~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 227 ------LPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred ------CCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 001122345688999999999999999999999998764
No 56
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.7e-34 Score=313.77 Aligned_cols=239 Identities=23% Similarity=0.332 Sum_probs=198.2
Q ss_pred cccccccceecccCceEEEEEEEc-CCceEEEEEechh--hHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCe-eEEE
Q 001838 725 TDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQR--YERALKSFQDECEVMKRIRHRNLVKIISACSNDDF-KALI 800 (1007)
Q Consensus 725 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~-~~lv 800 (1007)
.++|...+.+|+|+||.++..+.+ +++.+|+|.+.-. .....+...+|+.++++++|||||.+.+.|..++. .+||
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Iv 82 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIV 82 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEE
Confidence 467888999999999999998866 5789999988643 24445678899999999999999999999999887 9999
Q ss_pred EEecCCCChhHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCC
Q 001838 801 MEYMPNGSLENRLYSGT-CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQ 867 (1007)
Q Consensus 801 ~E~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~ 867 (1007)
||||+||++.+.+.+.+ ..++...+.+++.|++.|+.|| |++.|+|||++ |+.|||+||.+...
T Consensus 83 m~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~yl---H~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~ 159 (426)
T KOG0589|consen 83 MEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYL---HENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPE 159 (426)
T ss_pred EeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHH---HhhhhhcccchhhhhhccccCceeecchhhhhhcCCc
Confidence 99999999999998665 6789999999999999999999 68899999764 89999999998755
Q ss_pred CcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhc
Q 001838 868 DQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLL 947 (1007)
Q Consensus 868 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~ 947 (1007)
. ....+.+||+.||.||.+.+.+|+.|+||||+||++|||++=+++|...... ..+-....
T Consensus 160 ~--~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~-----------------~Li~ki~~ 220 (426)
T KOG0589|consen 160 D--SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMS-----------------ELILKINR 220 (426)
T ss_pred h--hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchH-----------------HHHHHHhh
Confidence 4 2346688999999999999999999999999999999999999999853211 11111111
Q ss_pred cchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 948 SGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 948 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
.. ..+.+.....++..++..|++.+|+.||++.+++.+
T Consensus 221 ~~---~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 221 GL---YSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred cc---CCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 00 112233445678999999999999999999999988
No 57
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-35 Score=318.50 Aligned_cols=234 Identities=26% Similarity=0.400 Sum_probs=190.8
Q ss_pred ceecccCceEEEEEEEc-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecCCCChh
Q 001838 732 NLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLE 810 (1007)
Q Consensus 732 ~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~gsL~ 810 (1007)
-++|+|.||+||.|++. +...+|||.+..+..+..+-+.+|+.+.++++|+|||+++|.|.+.++.-|.||-++||+|.
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS 660 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS 660 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence 36899999999999966 46679999998777666677889999999999999999999999999999999999999999
Q ss_pred HhhhcCCCCC--CHHHHHHHHHHHHHHHHHHHhcCCCCceecccc-------------ccceeecceecCCCCccccccc
Q 001838 811 NRLYSGTCML--DIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA-------------HISDFSIAKFLNGQDQLSMQTQ 875 (1007)
Q Consensus 811 ~~l~~~~~~l--~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~-------------kl~DFGla~~~~~~~~~~~~~~ 875 (1007)
+.|+..=+++ .+...-.+.+||++||.|| |...|||||++ ||+|||.+|.+.+- ...+.+
T Consensus 661 sLLrskWGPlKDNEstm~fYtkQILeGLkYL---Hen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgi--nP~TET 735 (1226)
T KOG4279|consen 661 SLLRSKWGPLKDNESTMNFYTKQILEGLKYL---HENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGI--NPCTET 735 (1226)
T ss_pred HHHHhccCCCccchhHHHHHHHHHHHHhhhh---hhcceeeccccCCcEEEeeccceEEecccccchhhccC--Cccccc
Confidence 9998764445 4556667899999999999 78889999775 99999999987532 223456
Q ss_pred ccCCcccccccccccCC--CCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhh
Q 001838 876 TLATIGYMAPEYGVQGR--VSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERY 953 (1007)
Q Consensus 876 ~~gt~~y~aPE~~~~~~--~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~ 953 (1007)
..||..|||||++..++ |+.++|||||||++.||.||++||.+......... ...+ ....
T Consensus 736 FTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMF---------------kVGm---yKvH 797 (1226)
T KOG4279|consen 736 FTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMF---------------KVGM---YKVH 797 (1226)
T ss_pred cccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhh---------------hhcc---eecC
Confidence 78999999999998764 89999999999999999999999976432211110 0000 1122
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 954 FAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 954 ~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
++.+++...++..++.+|..+||.+||+|.++++.
T Consensus 798 P~iPeelsaeak~FilrcFepd~~~R~sA~~LL~D 832 (1226)
T KOG4279|consen 798 PPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQD 832 (1226)
T ss_pred CCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccC
Confidence 33455667789999999999999999999999864
No 58
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.3e-34 Score=279.60 Aligned_cols=238 Identities=24% Similarity=0.343 Sum_probs=195.3
Q ss_pred cccccccceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEE
Q 001838 725 TDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALI 800 (1007)
Q Consensus 725 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 800 (1007)
.++|+..+.+|+|-||.||.|+.+ ++-.||+|++-+.. .+...++.+|++|-+.++||||.++++||.+....||+
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence 356889999999999999999865 57889999986543 23346789999999999999999999999999999999
Q ss_pred EEecCCCChhHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCC
Q 001838 801 MEYMPNGSLENRLYSGT-CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQ 867 (1007)
Q Consensus 801 ~E~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~ 867 (1007)
+||.++|++...|..+. ..++......++.|+|.|+.|+ |.+.|+|||++ |++|||.+-..+.
T Consensus 101 lEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~---h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~- 176 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYC---HLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS- 176 (281)
T ss_pred EEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHh---ccCCcccCCCCHHHhccCCCCCeeccCCCceeecCC-
Confidence 99999999999998543 3578888889999999999999 89999999875 8999999986542
Q ss_pred CcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhc
Q 001838 868 DQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLL 947 (1007)
Q Consensus 868 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~ 947 (1007)
......+||.-|.|||...+..++.++|+|++||+.||++.|.+||+....++ .+.+... .+..
T Consensus 177 ---~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~e-tYkrI~k-------~~~~----- 240 (281)
T KOG0580|consen 177 ---NKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSE-TYKRIRK-------VDLK----- 240 (281)
T ss_pred ---CCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHH-HHHHHHH-------cccc-----
Confidence 22356789999999999999999999999999999999999999998643211 1111100 0001
Q ss_pred cchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 001838 948 SGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLL 990 (1007)
Q Consensus 948 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~ 990 (1007)
.+......+.+++.+|+..+|.+|.+..||++.-.
T Consensus 241 --------~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpw 275 (281)
T KOG0580|consen 241 --------FPSTISGGAADLISRLLVKNPIERLALTEVMDHPW 275 (281)
T ss_pred --------CCcccChhHHHHHHHHhccCccccccHHHHhhhHH
Confidence 11233457899999999999999999999988643
No 59
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.6e-33 Score=313.95 Aligned_cols=255 Identities=22% Similarity=0.301 Sum_probs=192.9
Q ss_pred cccccccceecccCceEEEEEEEc-CCceEEEEEechh-hHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEE
Q 001838 725 TDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQR-YERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIME 802 (1007)
Q Consensus 725 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E 802 (1007)
.++|+..+.||+|+||+||+|+.. +|..||+|++... .....+++.+|++++++++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 367999999999999999999876 5889999998754 23445779999999999999999999999999999999999
Q ss_pred ecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcc
Q 001838 803 YMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQL 870 (1007)
Q Consensus 803 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~ 870 (1007)
|+++|+|.+++.... .+++..+..++.|++.||.||| ...+|+|+|++ ||+|||+++.....
T Consensus 84 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH--~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 157 (331)
T cd06649 84 HMDGGSLDQVLKEAK-RIPEEILGKVSIAVLRGLAYLR--EKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--- 157 (331)
T ss_pred cCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHh--hcCCEEcCCCChhhEEEcCCCcEEEccCccccccccc---
Confidence 999999999997654 4788899999999999999996 23469999763 89999999866432
Q ss_pred cccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhc----------------
Q 001838 871 SMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLL---------------- 934 (1007)
Q Consensus 871 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~---------------- 934 (1007)
......||+.|+|||++.+..++.++|||||||++|||+||+.||......+ +........
T Consensus 158 -~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (331)
T cd06649 158 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKE--LEAIFGRPVVDGEEGEPHSISPRPR 234 (331)
T ss_pred -ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHhcccccccccCCccccCcccc
Confidence 1234568999999999998889999999999999999999999996432111 111110000
Q ss_pred ---------------CccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 001838 935 ---------------PISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLL 990 (1007)
Q Consensus 935 ---------------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~ 990 (1007)
.....+..+.......... .......++.+++.+||+.||++|||+.|++++..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~ 303 (331)
T cd06649 235 PPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKL--PNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTF 303 (331)
T ss_pred cccccccccccccccchhHHHHHHHHHhCCCcCC--CCccccHHHHHHHHHHccCCcccCCCHHHHhcChH
Confidence 0000011110000000000 00112457899999999999999999999998753
No 60
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=1.6e-33 Score=309.58 Aligned_cols=257 Identities=19% Similarity=0.194 Sum_probs=189.0
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY--ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIME 802 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E 802 (1007)
++|+..+.||+|+||+||+|+.+ +++.||||+++... ....+.+.+|++++++++||||+++++++..++..|+|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 46889999999999999999976 58899999987542 2334678899999999999999999999999999999999
Q ss_pred ecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcc
Q 001838 803 YMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQL 870 (1007)
Q Consensus 803 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~ 870 (1007)
|++++.+..+.. ....+++..+..++.|++.||+|| |+.+|+|++++ ||+|||+++........
T Consensus 81 ~~~~~~l~~~~~-~~~~~~~~~~~~~~~qi~~~L~~l---H~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 156 (287)
T cd07848 81 YVEKNMLELLEE-MPNGVPPEKVRSYIYQLIKAIHWC---HKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNA 156 (287)
T ss_pred cCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccccc
Confidence 999887765543 334588889999999999999999 57789999763 89999999876432211
Q ss_pred cccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHh--hcCccHHHHh--hhh-
Q 001838 871 SMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVND--LLPISVMEVI--DTN- 945 (1007)
Q Consensus 871 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~--~~~~~~~~~~--d~~- 945 (1007)
......||+.|+|||++.+..++.++|||||||++|||++|+.||......+ ........ ..+....... ++.
T Consensus 157 -~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
T cd07848 157 -NYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEID-QLFTIQKVLGPLPAEQMKLFYSNPRF 234 (287)
T ss_pred -cccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhhCCCCHHHHHhhhccchh
Confidence 1234568999999999988889999999999999999999999997532211 11110000 0011000000 000
Q ss_pred -------hccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 946 -------LLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 946 -------~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
...............+.++.+++.+|++.||++|||++|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h 284 (287)
T cd07848 235 HGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH 284 (287)
T ss_pred cccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0000000000111234579999999999999999999999863
No 61
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.4e-34 Score=295.72 Aligned_cols=233 Identities=22% Similarity=0.333 Sum_probs=193.3
Q ss_pred cccccceecccCceEEEEEEE-cCCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEE
Q 001838 727 RFSKNNLLGIGSFGSVYVARL-QDGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIME 802 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E 802 (1007)
+|++.+.+|+|.||+|-+|+. ..|+.||||.+++.. ++..-.+.+|++||+.++||||++++++|+..+...||||
T Consensus 54 RyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivME 133 (668)
T KOG0611|consen 54 RYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVME 133 (668)
T ss_pred HHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEE
Confidence 577788999999999999985 579999999997653 4556678999999999999999999999999999999999
Q ss_pred ecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcc
Q 001838 803 YMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQL 870 (1007)
Q Consensus 803 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~ 870 (1007)
|..+|.|++|+.+.+ .+++.+..+++.||+.|+.|+ |.++++|||++ ||+|||++-......-
T Consensus 134 YaS~GeLYDYiSer~-~LsErEaRhfFRQIvSAVhYC---HknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~kf- 208 (668)
T KOG0611|consen 134 YASGGELYDYISERG-SLSEREARHFFRQIVSAVHYC---HKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKKF- 208 (668)
T ss_pred ecCCccHHHHHHHhc-cccHHHHHHHHHHHHHHHHHH---hhccceecccchhheeecCCCCeeeeccchhhhhccccH-
Confidence 999999999998765 488999999999999999999 78999999874 9999999988754322
Q ss_pred cccccccCCcccccccccccCCC-CchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccc
Q 001838 871 SMQTQTLATIGYMAPEYGVQGRV-STRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSG 949 (1007)
Q Consensus 871 ~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~ 949 (1007)
..+.+|++-|.+||.+.+.+| .+.+|-||+||+||.|+.|..||++... ...+ .++..+
T Consensus 209 --LqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dh-----k~lv-------------rQIs~G 268 (668)
T KOG0611|consen 209 --LQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDH-----KRLV-------------RQISRG 268 (668)
T ss_pred --HHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchH-----HHHH-------------HHhhcc
Confidence 356899999999999999887 6799999999999999999999986311 1111 112222
Q ss_pred hhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 950 EERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 950 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
..+.++. +.+..-|+++|+..+|++|.|+.+|..+
T Consensus 269 aYrEP~~----PSdA~gLIRwmLmVNP~RRATieDiAsH 303 (668)
T KOG0611|consen 269 AYREPET----PSDASGLIRWMLMVNPERRATIEDIASH 303 (668)
T ss_pred cccCCCC----CchHHHHHHHHHhcCcccchhHHHHhhh
Confidence 2222111 3356788999999999999999999876
No 62
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-33 Score=294.81 Aligned_cols=255 Identities=26% Similarity=0.391 Sum_probs=191.4
Q ss_pred ccccccceecccCceEEEEEEEcCCceEEEEEechhhHHHHHHHHHHHHHHHh--cCCCceeEEEEEEecCC----eeEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKR--IRHRNLVKIISACSNDD----FKAL 799 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~~~----~~~l 799 (1007)
.+....+.||+|.||+||+|.++ |+.||||++...++ +.+.+|.+|... ++|+||..+++.-..+. +.||
T Consensus 211 rqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~srdE---~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwL 286 (513)
T KOG2052|consen 211 RQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSRDE---RSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWL 286 (513)
T ss_pred heeEEEEEecCccccceeecccc-CCceEEEEecccch---hhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEE
Confidence 34566789999999999999997 89999999987654 567788888876 49999999998865443 6899
Q ss_pred EEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHh-----cCCCCceecccc------------ccceeecce
Q 001838 800 IMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHF-----GHSTPIIHYMVA------------HISDFSIAK 862 (1007)
Q Consensus 800 v~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~-----~~~~~ivH~~~~------------kl~DFGla~ 862 (1007)
|.||.+.|||+|||.+. .++....++++..+|.||+|||. ...+.|.|||++ .|+|+|+|-
T Consensus 287 vTdYHe~GSL~DyL~r~--tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv 364 (513)
T KOG2052|consen 287 VTDYHEHGSLYDYLNRN--TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 364 (513)
T ss_pred eeecccCCcHHHHHhhc--cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeE
Confidence 99999999999999874 48899999999999999999993 357789999885 499999997
Q ss_pred ecCCC-Ccc-cccccccCCcccccccccccCC----C--CchhhHHHHHHHHHHHHhCC----------CCCCccccCcc
Q 001838 863 FLNGQ-DQL-SMQTQTLATIGYMAPEYGVQGR----V--STRGDVYSYGIMLMETFTGK----------KPTDEIFIGEL 924 (1007)
Q Consensus 863 ~~~~~-~~~-~~~~~~~gt~~y~aPE~~~~~~----~--~~~~DvwS~Gvil~elltG~----------~p~~~~~~~~~ 924 (1007)
....+ +.. ......+||.+|||||++.... + -..+||||||.|+||++.+. .||.+....+.
T Consensus 365 ~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DP 444 (513)
T KOG2052|consen 365 RHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDP 444 (513)
T ss_pred EecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCC
Confidence 65433 111 1224568999999999986532 1 23689999999999998642 46655443333
Q ss_pred hHHHHHHhhcCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHH
Q 001838 925 SLSRWVNDLLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKIRDT 995 (1007)
Q Consensus 925 ~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~~~ 995 (1007)
+..+. .+++-....+..........+.+..+.++|+.||..+|..|-|+-.|-+.|.++.+.
T Consensus 445 s~eeM---------rkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~~ 506 (513)
T KOG2052|consen 445 SFEEM---------RKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSNS 506 (513)
T ss_pred CHHHH---------hcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhcC
Confidence 33222 122111111111111222334577899999999999999999999999999988753
No 63
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1.5e-33 Score=304.35 Aligned_cols=239 Identities=23% Similarity=0.407 Sum_probs=189.0
Q ss_pred ccccccceecccCceEEEEEEEcCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecC
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMP 805 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~ 805 (1007)
++|+..+.||+|+||.||+|+.+++..+|+|.+.... ...+.+.+|++++++++||||+++++++...+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~ 82 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME 82 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence 4577889999999999999998888899999886432 223578899999999999999999999999999999999999
Q ss_pred CCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCccccc
Q 001838 806 NGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLSMQ 873 (1007)
Q Consensus 806 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~~~~~ 873 (1007)
+|+|.++++.....+++..+..++.|++.||+|| |+.+|+|+++ +|++|||.++....... ...
T Consensus 83 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~-~~~ 158 (256)
T cd05114 83 NGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYL---ERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY-TSS 158 (256)
T ss_pred CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHH---HHCCccccccCcceEEEcCCCeEEECCCCCccccCCCce-ecc
Confidence 9999999986555689999999999999999999 5778999865 38999999987643221 111
Q ss_pred ccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhh
Q 001838 874 TQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEER 952 (1007)
Q Consensus 874 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~ 952 (1007)
....++..|+|||++....++.++|||||||++|||++ |+.||..... ......+..... ..
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~--~~~~~~i~~~~~----------~~----- 221 (256)
T cd05114 159 SGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSN--YEVVEMISRGFR----------LY----- 221 (256)
T ss_pred CCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHHCCCC----------CC-----
Confidence 23345678999999988889999999999999999999 8999875321 111111111000 00
Q ss_pred hHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 001838 953 YFAAKEQSLLSILNLATECTIESPGKRINAREIVTGL 989 (1007)
Q Consensus 953 ~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L 989 (1007)
.+.....++.+++.+||+.+|++||+|.|+++.|
T Consensus 222 ---~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 222 ---RPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred ---CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 0011134689999999999999999999999886
No 64
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-34 Score=319.07 Aligned_cols=243 Identities=23% Similarity=0.388 Sum_probs=199.6
Q ss_pred cccceecccCceEEEEEEE-cC----CceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEE
Q 001838 729 SKNNLLGIGSFGSVYVARL-QD----GMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIME 802 (1007)
Q Consensus 729 ~~~~~ig~G~~g~Vy~~~~-~~----g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E 802 (1007)
...++||+|+||+||||.+ +. ..+||||++.... .+...++.+|+-+|.+++|||+++++|+|..+. ..||++
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq 777 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQ 777 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHH
Confidence 3468899999999999974 33 4579999986543 455678999999999999999999999998776 789999
Q ss_pred ecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcc
Q 001838 803 YMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQL 870 (1007)
Q Consensus 803 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~ 870 (1007)
||+.|+|.++++.++..+.....+.+..|||+||.|| |..++|||+++ ||.|||+|+....++..
T Consensus 778 ~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YL---e~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~e 854 (1177)
T KOG1025|consen 778 LMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYL---EEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKE 854 (1177)
T ss_pred hcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHH---HhcchhhhhhhhhheeecCCCeEEEEecchhhccCccccc
Confidence 9999999999998888888899999999999999999 68899999764 89999999998755432
Q ss_pred cccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccc
Q 001838 871 SMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSG 949 (1007)
Q Consensus 871 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~ 949 (1007)
-......-.+.|||=|.+....|+.++|||||||++||++| |..||++...++ +.+.+.
T Consensus 855 y~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~e--------------I~dlle------ 914 (1177)
T KOG1025|consen 855 YSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEE--------------IPDLLE------ 914 (1177)
T ss_pred ccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHH--------------hhHHHh------
Confidence 22233344678999999999999999999999999999998 999998753222 111111
Q ss_pred hhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHH
Q 001838 950 EERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKIRDT 995 (1007)
Q Consensus 950 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~~~ 995 (1007)
...+.+.++-+..+++-++.+||..|+..||+++|+.....++.+.
T Consensus 915 ~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ard 960 (1177)
T KOG1025|consen 915 KGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARD 960 (1177)
T ss_pred ccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcC
Confidence 1112445566778899999999999999999999999998887654
No 65
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=4e-36 Score=324.60 Aligned_cols=363 Identities=28% Similarity=0.429 Sum_probs=184.1
Q ss_pred CCcEEEccCcccc-ccCCccccCCCCCcEEEcccccCCCCCCcccccccccceEEcccCcCCCCCCcccCCccccceeec
Q 001838 166 NLKKLLLGRNMFH-GKIPSTLSKCKQLEGLYLRFNNLSGAIPKEIGNLTKLKDIILNDNELRGEIPQEMGNLPYLVRLTL 244 (1007)
Q Consensus 166 ~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 244 (1007)
-.+-.|+++|.|+ +.+|.....+++++.|.|...+|. .+|.+++.+.+|++|.+++|++. .+-.++..++.|+.+++
T Consensus 8 FVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~ 85 (1255)
T KOG0444|consen 8 FVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVIV 85 (1255)
T ss_pred eeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHhh
Confidence 3344555555555 344555555555555555555554 44555555555555555555554 33344444445554444
Q ss_pred cCccccccccccccCCCCCCeEEcccccccCcCCchhhcCCCCCcEEeccCCCCCCCCCccccccCCCCEEEecCCCcCC
Q 001838 245 ATNNLVGVVPFTIFNMSTLKKLSLLENTLWGSLPSRIDLSLPNVEFLNLGTNRFSGNIPSSITNASKLTVFQLRGNSFSG 324 (1007)
Q Consensus 245 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 324 (1007)
.+|++.. .-+|..+| .+..|+.||||+|+++ ..|..+....++.+|+||+|+|..
T Consensus 86 R~N~LKn-----------------------sGiP~diF-~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Iet 140 (1255)
T KOG0444|consen 86 RDNNLKN-----------------------SGIPTDIF-RLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIET 140 (1255)
T ss_pred hcccccc-----------------------CCCCchhc-ccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCcccc
Confidence 4444421 22555554 5666666666666666 456666666677777777777765
Q ss_pred CCCcccccccccccccccccccccCCCCccccccccccccccEEEccCCCCCCCCCCCccccccccceeeeccccc-ccc
Q 001838 325 FIPNTIGNLRNLEFLNIADNYLTSSTPELSFLSSLTNCQKIRVLILAGNPLDGILPSSIGNLSISLERFQMFNCRI-SGK 403 (1007)
Q Consensus 325 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~l~~L~l~~n~l-~~~ 403 (1007)
++...|.+++.|-+||||+|++...+|. ...+..|++|.|++|++.-.--..+..+. +|+.|.+++.+- ...
T Consensus 141 IPn~lfinLtDLLfLDLS~NrLe~LPPQ------~RRL~~LqtL~Ls~NPL~hfQLrQLPsmt-sL~vLhms~TqRTl~N 213 (1255)
T KOG0444|consen 141 IPNSLFINLTDLLFLDLSNNRLEMLPPQ------IRRLSMLQTLKLSNNPLNHFQLRQLPSMT-SLSVLHMSNTQRTLDN 213 (1255)
T ss_pred CCchHHHhhHhHhhhccccchhhhcCHH------HHHHhhhhhhhcCCChhhHHHHhcCccch-hhhhhhcccccchhhc
Confidence 5545566677777777777777666654 34455666677777765421001111111 344444443321 123
Q ss_pred CChhhhccCCCcEEEccCCeeccccchhhhhccccCccccCCCccCCCCchhhhcccccceeecccccccCCCCCCCCCc
Q 001838 404 IPQVISNLSNLLLLDLGGNKLTGSIPVTFSRLLNLQGLGLAFNKLARSIPDEICHLAKLDKLILHGNKFSGAIPSCSGNL 483 (1007)
Q Consensus 404 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 483 (1007)
+|.++..+.+|..+|||.|.+. .+|..+.++.+|+.|+||+|+|+. +........+|+.|+||.|+++ .+|.++..+
T Consensus 214 ~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~ite-L~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL 290 (1255)
T KOG0444|consen 214 IPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKITE-LNMTEGEWENLETLNLSRNQLT-VLPDAVCKL 290 (1255)
T ss_pred CCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCceee-eeccHHHHhhhhhhccccchhc-cchHHHhhh
Confidence 5555555556666666666655 455555555555555555555542 2222333445555555555554 344444444
Q ss_pred ccCceeecCCcccccCCCcccccccccccccCCCCCcCCCCccccccccccceEeCccccCCCCccccccCCCCccEEec
Q 001838 484 TSLRALYLGSNRFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRNNLSGDIPITIGGLKNLQKLFL 563 (1007)
Q Consensus 484 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~Ldls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 563 (1007)
+.|+.|++.+|+++- ..+|..+|.+.+|+.+..++|.+. .+|..+..+..|+.|.|
T Consensus 291 ~kL~kLy~n~NkL~F-----------------------eGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L 346 (1255)
T KOG0444|consen 291 TKLTKLYANNNKLTF-----------------------EGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKL 346 (1255)
T ss_pred HHHHHHHhccCcccc-----------------------cCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhcc
Confidence 444444444444431 113333333334444444444443 44444444444444444
Q ss_pred cccccccccCccCcCCCCCCEEECCCC
Q 001838 564 ANNRLEGPIPESFSGLSSLEILDLSKN 590 (1007)
Q Consensus 564 s~N~l~~~~p~~~~~l~~L~~LdLs~N 590 (1007)
++|++- .+|+.+.-|+.|+.|||..|
T Consensus 347 ~~NrLi-TLPeaIHlL~~l~vLDlreN 372 (1255)
T KOG0444|consen 347 DHNRLI-TLPEAIHLLPDLKVLDLREN 372 (1255)
T ss_pred ccccee-echhhhhhcCCcceeeccCC
Confidence 444443 34444444444444444444
No 66
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=1.6e-33 Score=313.86 Aligned_cols=248 Identities=25% Similarity=0.382 Sum_probs=194.0
Q ss_pred ccccccceecccCceEEEEEEEc-CCc----eEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGM----EVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKAL 799 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 799 (1007)
.+|+..+.||+|+||+||+|++. +|. .||||+++... ....+++.+|+.+++.++||||++++|+|... ..++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence 46889999999999999999864 343 48999987542 34457789999999999999999999999875 4689
Q ss_pred EEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCC
Q 001838 800 IMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQ 867 (1007)
Q Consensus 800 v~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~ 867 (1007)
|+||+++|+|.+++......+++..+.+++.||+.||+|| |+.+|+|||++ ||+|||+++.....
T Consensus 86 v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~L---H~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 162 (316)
T cd05108 86 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL---EERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAD 162 (316)
T ss_pred eeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHH---HhcCeeccccchhheEecCCCcEEEccccccccccCC
Confidence 9999999999999987666688999999999999999999 57899999764 89999999977543
Q ss_pred CcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHHHHhhhhh
Q 001838 868 DQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNL 946 (1007)
Q Consensus 868 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~ 946 (1007)
..........++..|+|||++....++.++|||||||++|||++ |+.||++....+ +..+... ..
T Consensus 163 ~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~--~~~~~~~------------~~ 228 (316)
T cd05108 163 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--ISSILEK------------GE 228 (316)
T ss_pred CcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH--HHHHHhC------------CC
Confidence 32222223345678999999998899999999999999999998 999987532111 1111110 00
Q ss_pred ccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHhh
Q 001838 947 LSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKIRDTLV 997 (1007)
Q Consensus 947 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~~~~~ 997 (1007)
.. +.+..+..++.+++.+||+.+|++||++.|++..+.++.....
T Consensus 229 ~~------~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~~ 273 (316)
T cd05108 229 RL------PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQ 273 (316)
T ss_pred CC------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCCc
Confidence 00 0011123468899999999999999999999999998876543
No 67
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=4.4e-33 Score=305.51 Aligned_cols=244 Identities=27% Similarity=0.482 Sum_probs=193.1
Q ss_pred ccccccceecccCceEEEEEEEcC------CceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQD------GMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKA 798 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~~------g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 798 (1007)
++|+..+.||+|+||.||+|.... +..||+|.++... .....+|.+|++++++++||||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 467888999999999999998643 2579999987543 344567899999999999999999999999999999
Q ss_pred EEEEecCCCChhHhhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc----------
Q 001838 799 LIMEYMPNGSLENRLYSGT---------------CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA---------- 853 (1007)
Q Consensus 799 lv~E~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~---------- 853 (1007)
++|||+++|+|.+++.... ..+++..+..++.|++.||+|| |+.+++|++++
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~l---H~~~i~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYL---SSHHFVHRDLAARNCLVGEGL 161 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHH---HhCCeeccccccceEEEcCCC
Confidence 9999999999999997531 3478888999999999999999 56789998764
Q ss_pred --ccceeecceecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHH
Q 001838 854 --HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWV 930 (1007)
Q Consensus 854 --kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~ 930 (1007)
||+|||+++...............+++.|+|||++....++.++|||||||++|||++ |..||...... .+..++
T Consensus 162 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~--~~~~~i 239 (283)
T cd05048 162 TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ--EVIEMI 239 (283)
T ss_pred cEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHH
Confidence 8999999987654333333344567889999999988899999999999999999998 99998753211 111111
Q ss_pred HhhcCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHH
Q 001838 931 NDLLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKI 992 (1007)
Q Consensus 931 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i 992 (1007)
...... ..+...+.++.+++.+||+.||.+||+++||+++|+++
T Consensus 240 ------------~~~~~~------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 240 ------------RSRQLL------PCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred ------------HcCCcC------CCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 110000 01123356799999999999999999999999999753
No 68
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=6.7e-33 Score=304.70 Aligned_cols=247 Identities=28% Similarity=0.444 Sum_probs=195.6
Q ss_pred ccccccceecccCceEEEEEEEc------CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ------DGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKAL 799 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 799 (1007)
++|...+.||+|+||+||++... ++..||+|.+........+.+.+|++++++++||||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 84 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 46888899999999999999742 356799999986655566789999999999999999999999999999999
Q ss_pred EEEecCCCChhHhhhcCC------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------cc
Q 001838 800 IMEYMPNGSLENRLYSGT------------CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HI 855 (1007)
Q Consensus 800 v~E~~~~gsL~~~l~~~~------------~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl 855 (1007)
||||+++|+|.+++.... ..+++..+..++.|++.||+|| |+.+++||+++ |+
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~l---H~~~i~H~dlkp~Nili~~~~~~kl 161 (288)
T cd05093 85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKI 161 (288)
T ss_pred EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeecccCcceEEEccCCcEEe
Confidence 999999999999997432 2489999999999999999999 57889999764 79
Q ss_pred ceeecceecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhc
Q 001838 856 SDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLL 934 (1007)
Q Consensus 856 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~ 934 (1007)
+|||+++...............++..|+|||++....++.++|||||||++|||+| |+.||......+ ....+..
T Consensus 162 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~--~~~~i~~-- 237 (288)
T cd05093 162 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE--VIECITQ-- 237 (288)
T ss_pred ccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHc--
Confidence 99999987643332222233456788999999988889999999999999999998 999987532111 1111100
Q ss_pred CccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHH
Q 001838 935 PISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKIRDT 995 (1007)
Q Consensus 935 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~~~ 995 (1007)
. .... .+...+.++.+++.+||+.+|.+|||+.||.+.|+++...
T Consensus 238 -~--------~~~~-------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 238 -G--------RVLQ-------RPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred -C--------CcCC-------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 0 0000 0011234689999999999999999999999999998864
No 69
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=2.6e-33 Score=314.61 Aligned_cols=239 Identities=22% Similarity=0.310 Sum_probs=190.1
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIM 801 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 801 (1007)
++|+..+.||+|+||.||+|+.. +|+.||||+++... ....+.+.+|++++.+++||||+++++++.+++..|+||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 36888999999999999999976 58999999998653 234467889999999999999999999999999999999
Q ss_pred EecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCc
Q 001838 802 EYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQ 869 (1007)
Q Consensus 802 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~ 869 (1007)
||+++|+|.+++.... .+++..+..++.|++.||.|| |+.+|+|||++ ||+|||+++....
T Consensus 81 e~~~g~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~l---H~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~--- 153 (333)
T cd05600 81 EYVPGGDFRTLLNNLG-VLSEDHARFYMAEMFEAVDAL---HELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT--- 153 (333)
T ss_pred eCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCccccCCCHHHEEECCCCCEEEEeCcCCccccc---
Confidence 9999999999997644 478889999999999999999 57789999764 8999999986543
Q ss_pred ccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcc--hHHHHHHhhcCccHHHHhhhhhc
Q 001838 870 LSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGEL--SLSRWVNDLLPISVMEVIDTNLL 947 (1007)
Q Consensus 870 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~--~l~~~~~~~~~~~~~~~~d~~~~ 947 (1007)
......||+.|+|||++.+..++.++|||||||++|||++|+.||......+. .+..|... +.....
T Consensus 154 --~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~---------~~~~~~ 222 (333)
T cd05600 154 --YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKET---------LQRPVY 222 (333)
T ss_pred --ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhcccc---------ccCCCC
Confidence 12345799999999999988999999999999999999999999975322110 01111000 000000
Q ss_pred cchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 948 SGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 948 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
.. .......++.+++.+|+..+|++||++.|++++
T Consensus 223 --~~----~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 223 --DD----PRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred --Cc----cccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 00 001224568899999999999999999999976
No 70
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=4.3e-33 Score=302.53 Aligned_cols=244 Identities=23% Similarity=0.376 Sum_probs=193.7
Q ss_pred ccccccceecccCceEEEEEEEcC----CceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQD----GMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALI 800 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~~----g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 800 (1007)
++|+..+.||+|+||+||+|.+.. ...||||+++... ......|.+|+.++++++||||+++++++...+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 83 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII 83 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence 568889999999999999998752 4579999987543 34456789999999999999999999999999999999
Q ss_pred EEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCC
Q 001838 801 MEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQD 868 (1007)
Q Consensus 801 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~ 868 (1007)
|||+++|+|.+++......+++..+.+++.|++.|++|| |+.+|+|++++ |++|||+++......
T Consensus 84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~L---h~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~ 160 (266)
T cd05033 84 TEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYL---SEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSE 160 (266)
T ss_pred EEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCcceEEEcCCCCEEECccchhhcccccc
Confidence 999999999999987666789999999999999999999 56889999663 899999999875222
Q ss_pred cccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhc
Q 001838 869 QLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLL 947 (1007)
Q Consensus 869 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~ 947 (1007)
.........++..|+|||.+....++.++|||||||++|||++ |+.||...... ...+.+......
T Consensus 161 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~--~~~~~~~~~~~~----------- 227 (266)
T cd05033 161 ATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ--DVIKAVEDGYRL----------- 227 (266)
T ss_pred cceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH--HHHHHHHcCCCC-----------
Confidence 2112223345678999999988889999999999999999998 99998653211 111111110000
Q ss_pred cchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHH
Q 001838 948 SGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKI 992 (1007)
Q Consensus 948 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i 992 (1007)
+.+...+..+.+++.+|++.+|++||++.||+++|+++
T Consensus 228 -------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 228 -------PPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred -------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 00112245688999999999999999999999999875
No 71
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=7.5e-33 Score=324.52 Aligned_cols=239 Identities=21% Similarity=0.270 Sum_probs=189.2
Q ss_pred cccccceecccCceEEEEEEEc-C-CceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEec
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQ-D-GMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYM 804 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~-~-g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~ 804 (1007)
.|...+.||+|+||.||+|... + +..||+|.+..........+.+|+.++++++|||||+++++|..++..|+||||+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~ 147 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG 147 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence 4888999999999999999754 3 6789999876555555567888999999999999999999999999999999999
Q ss_pred CCCChhHhhhcC---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCc
Q 001838 805 PNGSLENRLYSG---TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQ 869 (1007)
Q Consensus 805 ~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~ 869 (1007)
++|+|.++++.. ...+++..+..++.||+.||+|| |+.+|+|||++ ||+|||+++.......
T Consensus 148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~l---H~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~ 224 (478)
T PTZ00267 148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEV---HSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS 224 (478)
T ss_pred CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH---HhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCccc
Confidence 999999988642 33578889999999999999999 57799999874 8999999997654322
Q ss_pred ccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccc
Q 001838 870 LSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSG 949 (1007)
Q Consensus 870 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~ 949 (1007)
.......+||++|+|||++....++.++|||||||++|||++|+.||..... ...+.. .....
T Consensus 225 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~-----~~~~~~------------~~~~~ 287 (478)
T PTZ00267 225 LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ-----REIMQQ------------VLYGK 287 (478)
T ss_pred cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHH------------HHhCC
Confidence 2223456799999999999988999999999999999999999999975311 111111 00000
Q ss_pred hhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 950 EERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 950 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
.. +.+.....++.+++.+||+.||++||++.|++..
T Consensus 288 ~~---~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 288 YD---PFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred CC---CCCccCCHHHHHHHHHHhccChhhCcCHHHHHhC
Confidence 00 0011123468899999999999999999999754
No 72
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=5.4e-33 Score=305.28 Aligned_cols=256 Identities=19% Similarity=0.247 Sum_probs=187.8
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEe
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEY 803 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~ 803 (1007)
++|...+.||+|+||+||+|+.+ +++.||+|+++... ......+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 57899999999999999999876 68999999987432 22235678899999999999999999999999999999999
Q ss_pred cCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCccc
Q 001838 804 MPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLS 871 (1007)
Q Consensus 804 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~ 871 (1007)
+++ +|.+++......+++..+..++.||+.||+|| |+.+|+|||++ ||+|||+++.......
T Consensus 85 ~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~L---H~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~-- 158 (288)
T cd07871 85 LDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYC---HKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTK-- 158 (288)
T ss_pred CCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCc--
Confidence 985 99999876655678899999999999999999 67899999764 8999999986542211
Q ss_pred ccccccCCccccccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhc--Ccc-HHHHh-----
Q 001838 872 MQTQTLATIGYMAPEYGVQ-GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLL--PIS-VMEVI----- 942 (1007)
Q Consensus 872 ~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~--~~~-~~~~~----- 942 (1007)
......|++.|+|||++.+ ..++.++||||+||++|||+||+.||......+. +........ +.. ..+..
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (288)
T cd07871 159 TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEE-LHLIFRLLGTPTEETWPGITSNEEF 237 (288)
T ss_pred cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCChHHhhccccchhh
Confidence 1234568999999998865 5689999999999999999999999975322111 111111000 000 00000
Q ss_pred hhhhccch--hhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 943 DTNLLSGE--ERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 943 d~~~~~~~--~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
........ ............+..+++.+|++.||++|||++|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h 285 (288)
T cd07871 238 RSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH 285 (288)
T ss_pred hccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00000000 00000011123467899999999999999999999863
No 73
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=5.7e-33 Score=307.60 Aligned_cols=258 Identities=21% Similarity=0.239 Sum_probs=188.3
Q ss_pred cccccccceecccCceEEEEEEEc-CCceEEEEEechhhH-HHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEE
Q 001838 725 TDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYE-RALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIME 802 (1007)
Q Consensus 725 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E 802 (1007)
.++|...+.||+|+||+||+|+.. +|+.||||+++.... .....+.+|+.++++++||||+++++++.+++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 478999999999999999999976 689999999875432 223457789999999999999999999999999999999
Q ss_pred ecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcc
Q 001838 803 YMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQL 870 (1007)
Q Consensus 803 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~ 870 (1007)
|++ |+|.+++......++...+..++.|++.||+|| |+.+|+|||++ ||+|||+++......
T Consensus 84 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~l---H~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-- 157 (303)
T cd07869 84 YVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYI---HQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPS-- 157 (303)
T ss_pred CCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCC--
Confidence 996 688888876656688889999999999999999 57889999774 899999998653221
Q ss_pred cccccccCCccccccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCcc------HHH--H
Q 001838 871 SMQTQTLATIGYMAPEYGVQ-GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPIS------VME--V 941 (1007)
Q Consensus 871 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~------~~~--~ 941 (1007)
.......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.......+........... ... .
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (303)
T cd07869 158 HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPH 237 (303)
T ss_pred ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccc
Confidence 12234568999999998765 45899999999999999999999999864321111111111100000 000 0
Q ss_pred hhhhhc---cchh-hhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 942 IDTNLL---SGEE-RYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 942 ~d~~~~---~~~~-~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
.++... .... ...........++.+++.+|++.||++|||+.|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h 288 (303)
T cd07869 238 FKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSH 288 (303)
T ss_pred cccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcC
Confidence 000000 0000 0000000112467899999999999999999999874
No 74
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6.6e-34 Score=312.58 Aligned_cols=232 Identities=24% Similarity=0.393 Sum_probs=188.3
Q ss_pred cceecccCceEEEEEEEc-CCceEEEEEechh----hHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCe--eEEEEEe
Q 001838 731 NNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQR----YERALKSFQDECEVMKRIRHRNLVKIISACSNDDF--KALIMEY 803 (1007)
Q Consensus 731 ~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~--~~lv~E~ 803 (1007)
..+||+|+|-+||||.+. +|.+||.-.++.. .++..++|..|+++|+.++|||||+++.+|.+... ..+|+|.
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL 124 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL 124 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence 467999999999999876 5899987655432 24556899999999999999999999999987664 7789999
Q ss_pred cCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc-------------ccceeecceecCCCCcc
Q 001838 804 MPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA-------------HISDFSIAKFLNGQDQL 870 (1007)
Q Consensus 804 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~-------------kl~DFGla~~~~~~~~~ 870 (1007)
|..|+|..|.++.+. .+......++.||++||.|||. |.+||+|||++ ||+|.|+|.......
T Consensus 125 ~TSGtLr~Y~kk~~~-vn~kaik~W~RQILkGL~yLHs-~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~-- 200 (632)
T KOG0584|consen 125 FTSGTLREYRKKHRR-VNIKAIKSWCRQILKGLVYLHS-QDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSH-- 200 (632)
T ss_pred ccCCcHHHHHHHhcc-CCHHHHHHHHHHHHHHhhhhhc-CCCCccccccccceEEEcCCcCceeecchhHHHHhhccc--
Confidence 999999999988764 7888999999999999999997 88999999875 999999999875432
Q ss_pred cccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccch
Q 001838 871 SMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGE 950 (1007)
Q Consensus 871 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~ 950 (1007)
...+.|||.|||||... ..|++.+||||||+.++||+|+..||..+.....-+.+......|..+..+-|
T Consensus 201 --aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~d------- 270 (632)
T KOG0584|consen 201 --AKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVKD------- 270 (632)
T ss_pred --cceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccCC-------
Confidence 24478999999999765 78999999999999999999999999875432222222222222333333222
Q ss_pred hhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 951 ERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 951 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
+++.+++.+|+.. .++|||+.|+++.
T Consensus 271 -----------Pevr~fIekCl~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 271 -----------PEVREFIEKCLAT-KSERLSAKELLKD 296 (632)
T ss_pred -----------HHHHHHHHHHhcC-chhccCHHHHhhC
Confidence 2688999999999 9999999999875
No 75
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.5e-34 Score=296.71 Aligned_cols=250 Identities=24% Similarity=0.306 Sum_probs=186.5
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCC-----eeEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDD-----FKAL 799 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-----~~~l 799 (1007)
-.|...+++|.|+||.||+|... +++.||||++-+..+ --.+|+++|+++.|||||++..+|.... ...+
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnl 99 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNL 99 (364)
T ss_pred EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHH
Confidence 35677899999999999999976 478999999875532 1246999999999999999999886432 3458
Q ss_pred EEEecCCCChhHhhhc---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc-------------ccceeeccee
Q 001838 800 IMEYMPNGSLENRLYS---GTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA-------------HISDFSIAKF 863 (1007)
Q Consensus 800 v~E~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~-------------kl~DFGla~~ 863 (1007)
|||||+. +|.++++. ....++...+.-++.|+.+||.|| |+.+|+|||++ ||||||-|+.
T Consensus 100 VleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yL---h~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~ 175 (364)
T KOG0658|consen 100 VLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYL---HSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKV 175 (364)
T ss_pred HHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHH---HhcCcccCCCChheEEEcCCCCeEEeccCCccee
Confidence 9999986 99998874 233467777778999999999999 56899999886 9999999999
Q ss_pred cCCCCcccccccccCCcccccccccccC-CCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHH-
Q 001838 864 LNGQDQLSMQTQTLATIGYMAPEYGVQG-RVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEV- 941 (1007)
Q Consensus 864 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~- 941 (1007)
+...+.. .+...|+.|+|||.+.+. .|+.+.||||.|||+.||+-|++-|.+.. +...++..++......-.++
T Consensus 176 L~~~epn---iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s-~~dQL~eIik~lG~Pt~e~I~ 251 (364)
T KOG0658|consen 176 LVKGEPN---ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDS-SVDQLVEIIKVLGTPTREDIK 251 (364)
T ss_pred eccCCCc---eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCC-HHHHHHHHHHHhCCCCHHHHh
Confidence 8655433 345679999999998875 59999999999999999999999887632 22334444443332221111
Q ss_pred -hh--------hhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 942 -ID--------TNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 942 -~d--------~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
+. +.+....... -.......+.++++.++++++|.+|.++.|++.+
T Consensus 252 ~mn~~y~~~~~p~ik~~~~~~-~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h 306 (364)
T KOG0658|consen 252 SMNPNYTEFKFPQIKAHPWHK-VFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH 306 (364)
T ss_pred hcCcccccccCccccccccee-ecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence 11 1111111000 0112334579999999999999999999999876
No 76
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=1.1e-32 Score=303.39 Aligned_cols=247 Identities=28% Similarity=0.439 Sum_probs=195.5
Q ss_pred ccccccceecccCceEEEEEEEc------CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ------DGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKAL 799 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 799 (1007)
.+|...+.||+|+||.||+|... ++..||+|.++.......+.+.+|++++++++||||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 35777899999999999999742 356799999986665556789999999999999999999999999999999
Q ss_pred EEEecCCCChhHhhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc-----------
Q 001838 800 IMEYMPNGSLENRLYSGT---------------CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA----------- 853 (1007)
Q Consensus 800 v~E~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~----------- 853 (1007)
||||+++|+|.+++..+. ..+++..+..++.|++.|++|| |+.+|+|++++
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~l---H~~~i~H~dlkp~Nil~~~~~~ 161 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLL 161 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHH---HhCCeeecccCcceEEEccCCc
Confidence 999999999999996532 2478999999999999999999 67889999764
Q ss_pred -ccceeecceecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHH
Q 001838 854 -HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVN 931 (1007)
Q Consensus 854 -kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~ 931 (1007)
|++|||+++...............++..|+|||++....++.++|||||||++|||+| |+.||......+ ..+...
T Consensus 162 ~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--~~~~~~ 239 (291)
T cd05094 162 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE--VIECIT 239 (291)
T ss_pred EEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHh
Confidence 8999999987643322222234457889999999988889999999999999999999 999986532211 111110
Q ss_pred hhcCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHH
Q 001838 932 DLLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKIRDT 995 (1007)
Q Consensus 932 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~~~ 995 (1007)
. ...... ....+..+.+++.+||+.+|++|||++||+++|+++.+.
T Consensus 240 ~------------~~~~~~------~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 240 Q------------GRVLER------PRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred C------------CCCCCC------CccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 0 000000 011244688999999999999999999999999999664
No 77
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=4.4e-33 Score=310.98 Aligned_cols=230 Identities=22% Similarity=0.272 Sum_probs=182.9
Q ss_pred ceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecCCC
Q 001838 732 NLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNG 807 (1007)
Q Consensus 732 ~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~g 807 (1007)
+.||+|+||+||+|+.. +|+.||||+++... ......+.+|++++++++||||+++++++...+..|+||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999865 68999999998643 233466789999999999999999999999999999999999999
Q ss_pred ChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCccccccc
Q 001838 808 SLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQ 875 (1007)
Q Consensus 808 sL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~~~~ 875 (1007)
+|.+++.... .+++..+..++.||+.||+|| |+.+|+|||++ ||+|||+++...... .....
T Consensus 81 ~L~~~l~~~~-~~~~~~~~~~~~qi~~~L~~l---H~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~--~~~~~ 154 (323)
T cd05571 81 ELFFHLSRER-VFSEDRARFYGAEIVSALGYL---HSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDG--ATMKT 154 (323)
T ss_pred cHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCC--Ccccc
Confidence 9999987654 578999999999999999999 57799999774 899999998643221 11234
Q ss_pred ccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhhHH
Q 001838 876 TLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYFA 955 (1007)
Q Consensus 876 ~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 955 (1007)
..||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.. . .. .
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~--~~~~~~~~---~--------~~--------~ 213 (323)
T cd05571 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLFELILM---E--------EI--------R 213 (323)
T ss_pred eecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHH--HHHHHHHc---C--------CC--------C
Confidence 57999999999999889999999999999999999999999753111 11111000 0 00 0
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCC-----CHHHHHHH
Q 001838 956 AKEQSLLSILNLATECTIESPGKRI-----NAREIVTG 988 (1007)
Q Consensus 956 ~~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~evl~~ 988 (1007)
.+.....++.+++.+||+.||++|| ++.|++++
T Consensus 214 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 251 (323)
T cd05571 214 FPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEH 251 (323)
T ss_pred CCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence 0112244688999999999999999 78988764
No 78
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=3.7e-33 Score=307.00 Aligned_cols=233 Identities=22% Similarity=0.293 Sum_probs=187.2
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIM 801 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 801 (1007)
++|+..+.||+|+||+||+|... +|+.||||++.... .+..+.+.+|++++++++||||+++++++.+.+..|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 46888999999999999999876 68999999997543 234467889999999999999999999999999999999
Q ss_pred EecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCc
Q 001838 802 EYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQ 869 (1007)
Q Consensus 802 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~ 869 (1007)
||+++|+|.+++.... .+++..+..++.|++.||+|| |+.+|+|||++ ||+|||+++.....
T Consensus 81 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~-- 154 (291)
T cd05612 81 EYVPGGELFSYLRNSG-RFSNSTGLFYASEIVCALEYL---HSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR-- 154 (291)
T ss_pred eCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCC--
Confidence 9999999999997654 478888899999999999999 67899999764 89999999876432
Q ss_pred ccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccc
Q 001838 870 LSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSG 949 (1007)
Q Consensus 870 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~ 949 (1007)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...... ......
T Consensus 155 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~-----~~~~~i--------~~~~~~-- 216 (291)
T cd05612 155 ---TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPF-----GIYEKI--------LAGKLE-- 216 (291)
T ss_pred ---cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHH--------HhCCcC--
Confidence 12346899999999998888999999999999999999999999753211 111110 000000
Q ss_pred hhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCC-----HHHHHHH
Q 001838 950 EERYFAAKEQSLLSILNLATECTIESPGKRIN-----AREIVTG 988 (1007)
Q Consensus 950 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt-----~~evl~~ 988 (1007)
.+......+.+++.+|++.||.+||+ +.|++++
T Consensus 217 ------~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 217 ------FPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred ------CCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 00111346889999999999999995 8888766
No 79
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=7.6e-33 Score=311.96 Aligned_cols=255 Identities=20% Similarity=0.256 Sum_probs=184.5
Q ss_pred cccccceecccCceEEEEEEEc-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCC-----eeE
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY--ERALKSFQDECEVMKRIRHRNLVKIISACSNDD-----FKA 798 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-----~~~ 798 (1007)
+|+..+.||+|+||.||+|+.. +|..||||++.... .....++.+|++++++++||||+++++++...+ ..|
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 4788899999999999999865 68999999987432 233456889999999999999999999886432 479
Q ss_pred EEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCC
Q 001838 799 LIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNG 866 (1007)
Q Consensus 799 lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~ 866 (1007)
+|||||+ ++|.+++.... .+++..+..++.|+++||+|| |+.+|+|||++ ||+|||+++....
T Consensus 81 lv~e~~~-~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~ 155 (338)
T cd07859 81 VVFELME-SDLHQVIKAND-DLTPEHHQFFLYQLLRALKYI---HTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 155 (338)
T ss_pred EEEecCC-CCHHHHHHhcc-cCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHeEECCCCcEEEccCcccccccc
Confidence 9999995 68999887654 488999999999999999999 57789999773 8999999986532
Q ss_pred CCcc-cccccccCCccccccccccc--CCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCc-------
Q 001838 867 QDQL-SMQTQTLATIGYMAPEYGVQ--GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPI------- 936 (1007)
Q Consensus 867 ~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~------- 936 (1007)
.... .......||+.|+|||++.. ..++.++|||||||++|||+||+.||..... .....++......
T Consensus 156 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~ 233 (338)
T cd07859 156 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNV--VHQLDLITDLLGTPSPETIS 233 (338)
T ss_pred ccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCCh--HHHHHHHHHHhCCCCHHHHH
Confidence 2211 11234579999999998765 6789999999999999999999999975321 1111111111110
Q ss_pred -----cHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 937 -----SVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 937 -----~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
...+.++..............+....++.+++.+||+.||++|||+.|++++
T Consensus 234 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 234 RVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred HhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 0001111000000000000001123467899999999999999999999976
No 80
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-33 Score=320.68 Aligned_cols=246 Identities=23% Similarity=0.334 Sum_probs=193.9
Q ss_pred ccccccceecccCceEEEEEEEcCC-ceEEEEEechhhHHHHHHHHHHHHHHHhcC-CCceeEEEEE-Eec---C---Ce
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQDG-MEVAVKVFHQRYERALKSFQDECEVMKRIR-HRNLVKIISA-CSN---D---DF 796 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~~g-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~-~~~---~---~~ 796 (1007)
-++.+.+.|.+|||+.||.|+...+ ..||+|++-..++...+...+||++|++++ |||||.+++. ... . -+
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~E 116 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWE 116 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeE
Confidence 3456778999999999999997765 999999998777888889999999999997 9999999993 322 1 25
Q ss_pred eEEEEEecCCCChhHhhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeeccee
Q 001838 797 KALIMEYMPNGSLENRLYSG-TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKF 863 (1007)
Q Consensus 797 ~~lv~E~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~ 863 (1007)
.+|.||||+||.|-+++..+ ...+++.++++|+.|+++|+.+||+ ..++|||||++ ||||||-|..
T Consensus 117 vllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~-~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt 195 (738)
T KOG1989|consen 117 VLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHY-LKPPIIHRDLKIENVLLSADGNYKLCDFGSATT 195 (738)
T ss_pred EEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhc-CCCccchhhhhhhheEEcCCCCEEeCccccccc
Confidence 78999999999999999743 3359999999999999999999997 68899999987 8999999875
Q ss_pred cCCCC-cccc------cccccCCcccccccccc---cCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhh
Q 001838 864 LNGQD-QLSM------QTQTLATIGYMAPEYGV---QGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDL 933 (1007)
Q Consensus 864 ~~~~~-~~~~------~~~~~gt~~y~aPE~~~---~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~ 933 (1007)
..... .... .-...-|+.|+|||.+. +...++|+||||+||+||-|+....||++.. ...
T Consensus 196 ~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg--~la-------- 265 (738)
T KOG1989|consen 196 KILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESG--KLA-------- 265 (738)
T ss_pred ccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCc--cee--------
Confidence 43211 1000 01124689999999764 4578999999999999999999999998631 100
Q ss_pred cCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHH
Q 001838 934 LPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKIRDT 995 (1007)
Q Consensus 934 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~~~ 995 (1007)
++. +.... +..+.....+.+|+..||+.||.+||++.+|++.+.+++..
T Consensus 266 -------Iln-----g~Y~~-P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~ 314 (738)
T KOG1989|consen 266 -------ILN-----GNYSF-PPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANK 314 (738)
T ss_pred -------EEe-----ccccC-CCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcC
Confidence 011 11111 11123466899999999999999999999999999988764
No 81
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.4e-32 Score=307.96 Aligned_cols=187 Identities=26% Similarity=0.342 Sum_probs=161.3
Q ss_pred cccccccceecccCceEEEEEEEc-CCceEEEEEechh-hHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEE
Q 001838 725 TDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQR-YERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIME 802 (1007)
Q Consensus 725 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E 802 (1007)
.++|+..+.||+|+||.||+|... +|..||+|+++.. .....+.+.+|++++++++|||||+++++|.+.+..++|||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 368999999999999999999876 5889999988754 23445678999999999999999999999999999999999
Q ss_pred ecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcc
Q 001838 803 YMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQL 870 (1007)
Q Consensus 803 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~ 870 (1007)
|+++|+|.+++.... .+++.....++.|++.|+.||| +..+|+|++++ ||+|||+++.....
T Consensus 84 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~~l~~~l~~lH--~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~--- 157 (333)
T cd06650 84 HMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--- 157 (333)
T ss_pred cCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH--hcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh---
Confidence 999999999997644 4788888999999999999996 34579999664 89999999865322
Q ss_pred cccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCc
Q 001838 871 SMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDE 918 (1007)
Q Consensus 871 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~ 918 (1007)
......|+..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 158 -~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~ 204 (333)
T cd06650 158 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP 204 (333)
T ss_pred -ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 11335689999999999888899999999999999999999999975
No 82
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=9.8e-33 Score=302.22 Aligned_cols=242 Identities=28% Similarity=0.442 Sum_probs=190.9
Q ss_pred ccccccceecccCceEEEEEEEcC------CceEEEEEechhhH-HHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQD------GMEVAVKVFHQRYE-RALKSFQDECEVMKRIRHRNLVKIISACSNDDFKA 798 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~~------g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 798 (1007)
++|...+.||+|+||.||+|+..+ ++.||||+++.... +..+.+.+|++++++++||||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence 467888999999999999998643 47899999976543 34578999999999999999999999999999999
Q ss_pred EEEEecCCCChhHhhhcCC-------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------
Q 001838 799 LIMEYMPNGSLENRLYSGT-------------CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------ 853 (1007)
Q Consensus 799 lv~E~~~~gsL~~~l~~~~-------------~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------ 853 (1007)
+||||+++|+|.+++.... ..+++..+..++.|++.|+.|| |+.+++|++++
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~l---H~~~i~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYL---ASQHFVHRDLATRNCLVGYDLVV 161 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHH---hhCCeeccccccceEEEcCCCeE
Confidence 9999999999999997532 3478889999999999999999 67789998753
Q ss_pred ccceeecceecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHh
Q 001838 854 HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVND 932 (1007)
Q Consensus 854 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~ 932 (1007)
|++|||+++...............+++.|+|||++....++.++|||||||++|||++ |+.||...... .....+..
T Consensus 162 kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~--~~~~~~~~ 239 (280)
T cd05049 162 KIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNE--EVIECITQ 239 (280)
T ss_pred EECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHHc
Confidence 8999999987643332222233456788999999999999999999999999999999 99998753211 11111110
Q ss_pred hcCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 001838 933 LLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLL 990 (1007)
Q Consensus 933 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~ 990 (1007)
. .... .+...+..+.+++.+||+.||++||++.||+++|+
T Consensus 240 ~------------~~~~------~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 240 G------------RLLQ------RPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred C------------CcCC------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 0 0000 01122456899999999999999999999999886
No 83
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=1.3e-32 Score=313.25 Aligned_cols=247 Identities=26% Similarity=0.372 Sum_probs=190.5
Q ss_pred cccccccceecccCceEEEEEEEc------CCceEEEEEechhh-HHHHHHHHHHHHHHHhcC-CCceeEEEEEEecCCe
Q 001838 725 TDRFSKNNLLGIGSFGSVYVARLQ------DGMEVAVKVFHQRY-ERALKSFQDECEVMKRIR-HRNLVKIISACSNDDF 796 (1007)
Q Consensus 725 ~~~~~~~~~ig~G~~g~Vy~~~~~------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~ 796 (1007)
.++|...+.||+|+||.||+|++. .++.||||+++... ....+.+.+|++++.++. |||||+++++|...+.
T Consensus 36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~ 115 (401)
T cd05107 36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGP 115 (401)
T ss_pred HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCC
Confidence 346778899999999999999853 24689999997543 333457899999999997 9999999999999999
Q ss_pred eEEEEEecCCCChhHhhhcCC-----------------------------------------------------------
Q 001838 797 KALIMEYMPNGSLENRLYSGT----------------------------------------------------------- 817 (1007)
Q Consensus 797 ~~lv~E~~~~gsL~~~l~~~~----------------------------------------------------------- 817 (1007)
.++|||||++|+|.+++++..
T Consensus 116 ~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (401)
T cd05107 116 IYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDM 195 (401)
T ss_pred cEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcc
Confidence 999999999999999996421
Q ss_pred --------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------
Q 001838 818 --------------------------------------CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------ 853 (1007)
Q Consensus 818 --------------------------------------~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------ 853 (1007)
..+++.+..+++.|++.||+|| |+++|+|||++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~L---H~~~ivHrdlkp~NiLl 272 (401)
T cd05107 196 KGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFL---ASKNCVHRDLAARNVLI 272 (401)
T ss_pred hhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHH---hcCCcCcccCCcceEEE
Confidence 1356778889999999999999 57889999764
Q ss_pred ------ccceeecceecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchH
Q 001838 854 ------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSL 926 (1007)
Q Consensus 854 ------kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l 926 (1007)
|++|||+++...............++..|+|||++....++.++|||||||++|||++ |+.||......+. .
T Consensus 273 ~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~-~ 351 (401)
T cd05107 273 CEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQ-F 351 (401)
T ss_pred eCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHH-H
Confidence 8999999987543222212233457889999999988889999999999999999998 8999865321110 0
Q ss_pred HHHHHhhcCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHH
Q 001838 927 SRWVNDLLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKIR 993 (1007)
Q Consensus 927 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~ 993 (1007)
. +.+...... ..+.....++.+++.+||+.+|++||+++||++.|+++.
T Consensus 352 ~------------~~~~~~~~~------~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 352 Y------------NAIKRGYRM------AKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred H------------HHHHcCCCC------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 0 111110000 001112356899999999999999999999999998763
No 84
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=5.6e-33 Score=310.84 Aligned_cols=233 Identities=21% Similarity=0.272 Sum_probs=187.0
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIM 801 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 801 (1007)
++|...+.||+|+||+||+|+.. +|+.||||+++... ....+.+.+|+.++++++|||||++++++.+++..|+||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 56888999999999999999976 58999999997643 234567889999999999999999999999999999999
Q ss_pred EecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCc
Q 001838 802 EYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQ 869 (1007)
Q Consensus 802 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~ 869 (1007)
||+++|+|.+++.+.. .+++..+..++.|++.||+|| |+.+|+|||++ ||+|||+++......
T Consensus 98 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~L---H~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~- 172 (329)
T PTZ00263 98 EFVVGGELFTHLRKAG-RFPNDVAKFYHAELVLAFEYL---HSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRT- 172 (329)
T ss_pred cCCCCChHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCCc-
Confidence 9999999999997654 478888888999999999999 57889999774 899999998764321
Q ss_pred ccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccc
Q 001838 870 LSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSG 949 (1007)
Q Consensus 870 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~ 949 (1007)
....||+.|+|||++....++.++|||||||++|||++|+.||.+.... +..... ......
T Consensus 173 ----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-----~~~~~i--------~~~~~~-- 233 (329)
T PTZ00263 173 ----FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPF-----RIYEKI--------LAGRLK-- 233 (329)
T ss_pred ----ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHH-----HHHHHH--------hcCCcC--
Confidence 2356999999999999888999999999999999999999999753210 111110 000000
Q ss_pred hhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCC-----HHHHHHH
Q 001838 950 EERYFAAKEQSLLSILNLATECTIESPGKRIN-----AREIVTG 988 (1007)
Q Consensus 950 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt-----~~evl~~ 988 (1007)
.+.....++.+++.+||+.||++||+ ++|++++
T Consensus 234 ------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 234 ------FPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred ------CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 00011335789999999999999997 6777755
No 85
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1e-32 Score=306.10 Aligned_cols=239 Identities=24% Similarity=0.338 Sum_probs=197.4
Q ss_pred cccccccceecccCceEEEEEEEc-CCceEEEEEechhhH---HHHHHHHHHHHHHHhcC-CCceeEEEEEEecCCeeEE
Q 001838 725 TDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYE---RALKSFQDECEVMKRIR-HRNLVKIISACSNDDFKAL 799 (1007)
Q Consensus 725 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~l 799 (1007)
.+.|...+.||+|.||+||+|+.+ +|+.+|+|++.+... ...+...+|+.+|+++. |||||.+.++|++....++
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l 113 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL 113 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence 456888899999999999999977 499999999986643 23468899999999998 9999999999999999999
Q ss_pred EEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc----------------ccceeeccee
Q 001838 800 IMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA----------------HISDFSIAKF 863 (1007)
Q Consensus 800 v~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~----------------kl~DFGla~~ 863 (1007)
|||+|.||.|.+.+... .+++..+..++.|++.|+.|| |+.+|+|||++ |++|||+|+.
T Consensus 114 vmEL~~GGeLfd~i~~~--~~sE~da~~~~~~il~av~~l---H~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~ 188 (382)
T KOG0032|consen 114 VMELCEGGELFDRIVKK--HYSERDAAGIIRQILEAVKYL---HSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKF 188 (382)
T ss_pred EEEecCCchHHHHHHHc--cCCHHHHHHHHHHHHHHHHHH---HhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceE
Confidence 99999999999999876 388999999999999999999 67999999764 8999999998
Q ss_pred cCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhh
Q 001838 864 LNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVID 943 (1007)
Q Consensus 864 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d 943 (1007)
.... ......+||++|+|||++....|+.++||||.||++|.|++|.+||......+... .+..
T Consensus 189 ~~~~---~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~-------------~i~~ 252 (382)
T KOG0032|consen 189 IKPG---ERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL-------------AILR 252 (382)
T ss_pred ccCC---ceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH-------------HHHc
Confidence 8652 23356789999999999998999999999999999999999999998643222111 1111
Q ss_pred hhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 944 TNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 944 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
... ....+..+.....+.+++..|+..||.+|+|+.+++++
T Consensus 253 ~~~----~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 253 GDF----DFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred CCC----CCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 000 00011122335678999999999999999999999995
No 86
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=8.8e-33 Score=309.82 Aligned_cols=247 Identities=28% Similarity=0.398 Sum_probs=190.7
Q ss_pred ccccccceecccCceEEEEEEEc------CCceEEEEEechhh-HHHHHHHHHHHHHHHhc-CCCceeEEEEEEecC-Ce
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ------DGMEVAVKVFHQRY-ERALKSFQDECEVMKRI-RHRNLVKIISACSND-DF 796 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~-~~ 796 (1007)
++|+..+.||+|+||.||+|... +++.||+|+++... ....+.+.+|+.++.++ +||||++++++|... ..
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~ 86 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGP 86 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCC
Confidence 57889999999999999999642 35789999987532 33346788899999999 799999999988654 57
Q ss_pred eEEEEEecCCCChhHhhhcCC-----------------------------------------------------------
Q 001838 797 KALIMEYMPNGSLENRLYSGT----------------------------------------------------------- 817 (1007)
Q Consensus 797 ~~lv~E~~~~gsL~~~l~~~~----------------------------------------------------------- 817 (1007)
.++||||+++|+|.+++....
T Consensus 87 ~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (337)
T cd05054 87 LMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELY 166 (337)
T ss_pred EEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHh
Confidence 889999999999999885321
Q ss_pred -CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcccccccccCCccccc
Q 001838 818 -CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMA 884 (1007)
Q Consensus 818 -~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~~~~~~gt~~y~a 884 (1007)
..+++..+..++.||+.||+|| |+.+|+|||++ ||+|||+++.+.............++..|+|
T Consensus 167 ~~~l~~~~~~~~~~qi~~aL~~l---H~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~a 243 (337)
T cd05054 167 KEPLTLEDLISYSFQVARGMEFL---ASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 243 (337)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccC
Confidence 2578899999999999999999 57799999774 8999999987643332222234456788999
Q ss_pred ccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhhHHHHHHHHHH
Q 001838 885 PEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYFAAKEQSLLS 963 (1007)
Q Consensus 885 PE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 963 (1007)
||++.+..++.++|||||||++|||++ |+.||......+ .+...... .... ..+.....+
T Consensus 244 PE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~-~~~~~~~~------------~~~~------~~~~~~~~~ 304 (337)
T cd05054 244 PESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE-EFCRRLKE------------GTRM------RAPEYATPE 304 (337)
T ss_pred cHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH-HHHHHHhc------------cCCC------CCCccCCHH
Confidence 999999999999999999999999998 999987532111 11111100 0000 001122346
Q ss_pred HHHHHhhcCCCCCCCCCCHHHHHHHHHHHHH
Q 001838 964 ILNLATECTIESPGKRINAREIVTGLLKIRD 994 (1007)
Q Consensus 964 ~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~~ 994 (1007)
+.+++.+||+.+|++||++.|++++|+++.+
T Consensus 305 ~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 305 IYSIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 8999999999999999999999999998754
No 87
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=2.4e-32 Score=298.67 Aligned_cols=246 Identities=22% Similarity=0.373 Sum_probs=190.2
Q ss_pred ccccccceecccCceEEEEEEEc-CCc----eEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGM----EVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKAL 799 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 799 (1007)
++|+..+.||+|+||+||+|.+. +|+ .||+|.+.... .....++..|+.++++++|||||++++++.. ...++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEE
Confidence 46778899999999999999864 344 47888876433 2344678889999999999999999998864 45789
Q ss_pred EEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCC
Q 001838 800 IMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQ 867 (1007)
Q Consensus 800 v~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~ 867 (1007)
|+||+++|+|.+++......+++..+..++.||+.||+|| |+.+++|++++ |++|||+++.....
T Consensus 86 i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~ 162 (279)
T cd05111 86 VTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYL---EEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPD 162 (279)
T ss_pred EEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---HHCCEeccccCcceEEEcCCCcEEEcCCccceeccCC
Confidence 9999999999999987666789999999999999999999 56789999763 89999999876543
Q ss_pred CcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHHHHhhhhh
Q 001838 868 DQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNL 946 (1007)
Q Consensus 868 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~ 946 (1007)
..........++..|+|||++....++.++|||||||++||++| |+.||.+... ....+++......
T Consensus 163 ~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~--~~~~~~~~~~~~~---------- 230 (279)
T cd05111 163 DKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRP--HEVPDLLEKGERL---------- 230 (279)
T ss_pred CcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHHCCCcC----------
Confidence 32222234557789999999988899999999999999999998 9999875321 1111221110000
Q ss_pred ccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHH
Q 001838 947 LSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKIRDT 995 (1007)
Q Consensus 947 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~~~ 995 (1007)
. .+..+..++.+++.+||..+|++|||+.|+++.|..+.+.
T Consensus 231 --~------~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~ 271 (279)
T cd05111 231 --A------QPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARD 271 (279)
T ss_pred --C------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence 0 0001123578899999999999999999999999887653
No 88
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=3e-32 Score=296.16 Aligned_cols=246 Identities=18% Similarity=0.282 Sum_probs=193.8
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechh---hHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQR---YERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIM 801 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 801 (1007)
++|...+.||+|+||.||+|+.. +++.||||.++.. ..+....+.+|++++++++||||+++++++.+.+..++||
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 57889999999999999999865 6899999987542 2344567899999999999999999999999999999999
Q ss_pred EecCCCChhHhhhc---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCC
Q 001838 802 EYMPNGSLENRLYS---GTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNG 866 (1007)
Q Consensus 802 E~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~ 866 (1007)
||+++|+|.+++.. ....++...+..++.|++.||+|| |+.+++|++++ +++|||+++....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~L---H~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHM---HSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHH---hhCCeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 99999999988853 234578888999999999999999 67899999764 7999999987643
Q ss_pred CCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhh
Q 001838 867 QDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNL 946 (1007)
Q Consensus 867 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~ 946 (1007)
... ......|++.|+|||++.+..++.++|||||||++|||++|+.||...... ...+.... ....
T Consensus 159 ~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~---~~~~~~~~---------~~~~ 224 (267)
T cd08228 159 KTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN---LFSLCQKI---------EQCD 224 (267)
T ss_pred hhH--HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCcccccc---HHHHHHHH---------hcCC
Confidence 221 122346889999999998888999999999999999999999998643211 11111111 0000
Q ss_pred ccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHH
Q 001838 947 LSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKIR 993 (1007)
Q Consensus 947 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~ 993 (1007)
... ........++.+++.+||+.+|++||++.||++.+++++
T Consensus 225 ~~~-----~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 225 YPP-----LPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred CCC-----CChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 000 001123456899999999999999999999999998764
No 89
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=4.5e-33 Score=301.51 Aligned_cols=245 Identities=26% Similarity=0.431 Sum_probs=196.9
Q ss_pred HhcccccccceecccCceEEEEEEEcCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEE
Q 001838 723 QATDRFSKNNLLGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIME 802 (1007)
Q Consensus 723 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E 802 (1007)
++..+|+..+.||+|+||.||+|...++..||+|++..........+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 3 ~~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 82 (261)
T cd05148 3 RPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITE 82 (261)
T ss_pred CcHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEe
Confidence 34567888999999999999999988899999999987665556788999999999999999999999999999999999
Q ss_pred ecCCCChhHhhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCc
Q 001838 803 YMPNGSLENRLYSG-TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQ 869 (1007)
Q Consensus 803 ~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~ 869 (1007)
|+++|+|.+++.+. ...+++..+.+++.|++.|++|| |+.+|+|+++. |++|||.+........
T Consensus 83 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~l---H~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~ 159 (261)
T cd05148 83 LMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYL---EEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVY 159 (261)
T ss_pred ecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeccccCcceEEEcCCceEEEccccchhhcCCccc
Confidence 99999999999763 34589999999999999999999 56789999764 8999999987643221
Q ss_pred ccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhcc
Q 001838 870 LSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLS 948 (1007)
Q Consensus 870 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~ 948 (1007)
......++..|+|||++....++.++|||||||++|||++ |+.||...... ...+.+.. ...
T Consensus 160 --~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~--~~~~~~~~------------~~~- 222 (261)
T cd05148 160 --LSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH--EVYDQITA------------GYR- 222 (261)
T ss_pred --cccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH--HHHHHHHh------------CCc-
Confidence 1123446778999999988889999999999999999998 89999753211 11111110 000
Q ss_pred chhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHH
Q 001838 949 GEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKI 992 (1007)
Q Consensus 949 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i 992 (1007)
.+.+...+.++.+++.+||+.||++|||++|+.+.|+.+
T Consensus 223 -----~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 223 -----MPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred -----CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 000112245688999999999999999999999999864
No 90
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1.8e-32 Score=295.09 Aligned_cols=236 Identities=27% Similarity=0.407 Sum_probs=184.4
Q ss_pred ceecccCceEEEEEEEc-CCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecCCCCh
Q 001838 732 NLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSL 809 (1007)
Q Consensus 732 ~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~gsL 809 (1007)
+.||+|+||+||+|+.. +++.||+|.+.... ......+.+|++++++++||||++++++|...+..++||||+++|+|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 46899999999999875 68999999886443 34457799999999999999999999999999999999999999999
Q ss_pred hHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCccccccccc
Q 001838 810 ENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTL 877 (1007)
Q Consensus 810 ~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~~~~~~ 877 (1007)
.+++......+++..+..++.|++.||+|| |+.+|+|+++. |++|||+++...............
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~qi~~~L~~l---H~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 157 (252)
T cd05084 81 LTFLRTEGPRLKVKELIQMVENAAAGMEYL---ESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQ 157 (252)
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHHHHHH---HhCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCC
Confidence 999976655689999999999999999999 57789998753 899999998654221111111112
Q ss_pred CCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhhHHH
Q 001838 878 ATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYFAA 956 (1007)
Q Consensus 878 gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 956 (1007)
++..|+|||.+....++.++|||||||++|||++ |..||....... ....++...... .
T Consensus 158 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~--------------~~~~~~~~~~~~------~ 217 (252)
T cd05084 158 IPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQ--------------TREAIEQGVRLP------C 217 (252)
T ss_pred CceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHH--------------HHHHHHcCCCCC------C
Confidence 3467999999988889999999999999999998 888886432110 111111100000 0
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 001838 957 KEQSLLSILNLATECTIESPGKRINAREIVTGLL 990 (1007)
Q Consensus 957 ~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~ 990 (1007)
+...+.++.+++.+|++.+|++|||+.|+.++|+
T Consensus 218 ~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 218 PELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 1122446899999999999999999999999886
No 91
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-35 Score=290.49 Aligned_cols=237 Identities=24% Similarity=0.316 Sum_probs=195.7
Q ss_pred cccccceecccCceEEEEEEEc-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecC
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMP 805 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~ 805 (1007)
-|++.+++|+|+||.||+|.++ .|+.||||.+.-. ...+++..|+.++.+...|++|++||.|......|+|||||.
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCG 111 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCG 111 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcC
Confidence 4667789999999999999866 5999999998654 335778999999999999999999998888888999999999
Q ss_pred CCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCccccc
Q 001838 806 NGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLSMQ 873 (1007)
Q Consensus 806 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~~~~~ 873 (1007)
.|+..+.++-+...+.+.++..+..+.++||+||| ...-+|||+ +|++|||.|..+.+ .....
T Consensus 112 AGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH---~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTD--TMAKR 186 (502)
T KOG0574|consen 112 AGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLH---DLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTD--TMAKR 186 (502)
T ss_pred CCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHH---HHHHHHhhcccccEEEcccchhhhhhccccchhhh--hHHhh
Confidence 99999999987778999999999999999999996 445578865 59999999987753 22233
Q ss_pred ccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhh
Q 001838 874 TQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERY 953 (1007)
Q Consensus 874 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~ 953 (1007)
..+.||+.|||||++..-.|+.++||||+|+...||..|++||.+......- .++ .......
T Consensus 187 NTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAI------FMI------------PT~PPPT 248 (502)
T KOG0574|consen 187 NTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAI------FMI------------PTKPPPT 248 (502)
T ss_pred CccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccccccee------Eec------------cCCCCCC
Confidence 5678999999999999999999999999999999999999999875322100 000 0111222
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 954 FAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 954 ~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
+..++....++-++++.|+...|++|-|+.+++++
T Consensus 249 F~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 249 FKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred CCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 33456677889999999999999999999998876
No 92
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=8.4e-33 Score=307.28 Aligned_cols=228 Identities=21% Similarity=0.258 Sum_probs=180.4
Q ss_pred ecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecCCCCh
Q 001838 734 LGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSL 809 (1007)
Q Consensus 734 ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~gsL 809 (1007)
||+|+||+||+|+.. +++.||+|+++... ......+.+|++++++++|||||++++++.+.+..|+||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999876 58899999997542 33456788999999999999999999999999999999999999999
Q ss_pred hHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCccccccccc
Q 001838 810 ENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTL 877 (1007)
Q Consensus 810 ~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~~~~~~ 877 (1007)
.+++.+.. .+++..+..++.|++.||+|| |+.+|+|||++ ||+|||+++...... .......
T Consensus 81 ~~~l~~~~-~~~~~~~~~~~~qi~~~l~~l---H~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~ 154 (312)
T cd05585 81 FHHLQREG-RFDLSRARFYTAELLCALENL---HKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD--DKTNTFC 154 (312)
T ss_pred HHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCC--Ccccccc
Confidence 99997654 488899999999999999999 57889999764 899999998643221 1223457
Q ss_pred CCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhhHHHH
Q 001838 878 ATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYFAAK 957 (1007)
Q Consensus 878 gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 957 (1007)
||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+......... . ..+
T Consensus 155 gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~-----~~~~~~~~~~~--------~--------~~~ 213 (312)
T cd05585 155 GTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENV-----NEMYRKILQEP--------L--------RFP 213 (312)
T ss_pred CCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCH-----HHHHHHHHcCC--------C--------CCC
Confidence 99999999999988999999999999999999999999975321 11111111000 0 001
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCC---HHHHHHH
Q 001838 958 EQSLLSILNLATECTIESPGKRIN---AREIVTG 988 (1007)
Q Consensus 958 ~~~~~~~~~l~~~cl~~~p~~Rpt---~~evl~~ 988 (1007)
.....++.+++.+||+.||++||+ +.|++.+
T Consensus 214 ~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~h 247 (312)
T cd05585 214 DGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNH 247 (312)
T ss_pred CcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcC
Confidence 122346889999999999999985 5666654
No 93
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=1.8e-32 Score=296.85 Aligned_cols=241 Identities=23% Similarity=0.361 Sum_probs=191.6
Q ss_pred ccccccceecccCceEEEEEEEcCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecC
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMP 805 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~ 805 (1007)
++|+..+.||+|+||.||+|...++..||+|.+..... ..+.+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 84 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTM-SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMA 84 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCch-hHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCC
Confidence 56888999999999999999988888999999875432 34678999999999999999999999999999999999999
Q ss_pred CCChhHhhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcccc
Q 001838 806 NGSLENRLYSG-TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSM 872 (1007)
Q Consensus 806 ~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~ 872 (1007)
+|+|.+++++. ...+++..+..++.|++.|++|| |+.+++|+++. |++|||+++........ .
T Consensus 85 ~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~L---H~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~-~ 160 (261)
T cd05072 85 KGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYI---ERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYT-A 160 (261)
T ss_pred CCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeccccchhhEEecCCCcEEECCCccceecCCCcee-c
Confidence 99999999754 34578889999999999999999 56789998763 79999999876532211 1
Q ss_pred cccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchh
Q 001838 873 QTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEE 951 (1007)
Q Consensus 873 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~ 951 (1007)
.....++..|+|||++....++.++|||||||++|||+| |+.||...... ....++....+.
T Consensus 161 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~--~~~~~~~~~~~~--------------- 223 (261)
T cd05072 161 REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS--DVMSALQRGYRM--------------- 223 (261)
T ss_pred cCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH--HHHHHHHcCCCC---------------
Confidence 223346778999999988889999999999999999998 99998653211 111111110000
Q ss_pred hhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 001838 952 RYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLK 991 (1007)
Q Consensus 952 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~ 991 (1007)
+.....+.++.+++.+|+..+|++||+++++.+.|++
T Consensus 224 ---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 224 ---PRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred ---CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 0001123468899999999999999999999999875
No 94
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-33 Score=278.06 Aligned_cols=242 Identities=22% Similarity=0.300 Sum_probs=193.0
Q ss_pred cccccccceecccCceEEEEEEEc-CCceEEEEEechhh--------HHHHHHHHHHHHHHHhcC-CCceeEEEEEEecC
Q 001838 725 TDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY--------ERALKSFQDECEVMKRIR-HRNLVKIISACSND 794 (1007)
Q Consensus 725 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~ 794 (1007)
-+.|...+.+|.|..++|.++..+ +|++.|+|++.... ....++-.+|+.||+++. ||+|+++.++|+.+
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~ 95 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD 95 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence 346788899999999999999755 68999999986321 233466788999999995 99999999999999
Q ss_pred CeeEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecce
Q 001838 795 DFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAK 862 (1007)
Q Consensus 795 ~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~ 862 (1007)
.+.++|+|.|+.|.|+++|.+.. .+++....+|+.|+..|++|| |...|||||++ ||+|||+|+
T Consensus 96 sF~FlVFdl~prGELFDyLts~V-tlSEK~tR~iMrqlfegVeyl---Ha~~IVHRDLKpENILlddn~~i~isDFGFa~ 171 (411)
T KOG0599|consen 96 AFVFLVFDLMPRGELFDYLTSKV-TLSEKETRRIMRQLFEGVEYL---HARNIVHRDLKPENILLDDNMNIKISDFGFAC 171 (411)
T ss_pred chhhhhhhhcccchHHHHhhhhe-eecHHHHHHHHHHHHHHHHHH---HHhhhhhcccChhheeeccccceEEeccceee
Confidence 99999999999999999998654 478888889999999999999 78899999875 899999999
Q ss_pred ecCCCCcccccccccCCccccccccccc------CCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCc
Q 001838 863 FLNGQDQLSMQTQTLATIGYMAPEYGVQ------GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPI 936 (1007)
Q Consensus 863 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~ 936 (1007)
.+..+... +..+|||+|+|||.+.. ..|+..+|+||.|||+|.++.|.+||-... ++-
T Consensus 172 ~l~~GekL---relCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRk--Qml----------- 235 (411)
T KOG0599|consen 172 QLEPGEKL---RELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRK--QML----------- 235 (411)
T ss_pred ccCCchhH---HHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHH--HHH-----------
Confidence 98765443 56799999999998753 358899999999999999999999985411 000
Q ss_pred cHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 001838 937 SVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLL 990 (1007)
Q Consensus 937 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~ 990 (1007)
++........+...+...+....+.+|+.+|++.||++|.|++|++++--
T Consensus 236 ----MLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpf 285 (411)
T KOG0599|consen 236 ----MLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPF 285 (411)
T ss_pred ----HHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChH
Confidence 00001111112222223345667899999999999999999999998743
No 95
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=5.5e-35 Score=315.83 Aligned_cols=361 Identities=28% Similarity=0.470 Sum_probs=274.3
Q ss_pred CCeecccCcccC-CCCchhHhhcCCCCcEEEccCccccccCCccccCCCCCcEEEcccccCCCCCCcccccccccceEEc
Q 001838 142 MLGIDLSINRFS-GELPANICKNLPNLKKLLLGRNMFHGKIPSTLSKCKQLEGLYLRFNNLSGAIPKEIGNLTKLKDIIL 220 (1007)
Q Consensus 142 L~~LdLs~N~l~-~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 220 (1007)
.+..|+|.|.|+ +.+|.+. ..+++++.|.|...++. .+|+.++.+.+|++|.+++|+|. .+..++..|+.|+.+++
T Consensus 9 VrGvDfsgNDFsg~~FP~~v-~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~ 85 (1255)
T KOG0444|consen 9 VRGVDFSGNDFSGDRFPHDV-EQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVIV 85 (1255)
T ss_pred eecccccCCcCCCCcCchhH-HHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHhh
Confidence 455678888888 4567766 47899999999999987 78999999999999999999998 56678889999999999
Q ss_pred ccCcCCC-CCCcccCCccccceeeccCccccccccccccCCCCCCeEEcccccccCcCCchhhcCCCCCcEEeccCCCCC
Q 001838 221 NDNELRG-EIPQEMGNLPYLVRLTLATNNLVGVVPFTIFNMSTLKKLSLLENTLWGSLPSRIDLSLPNVEFLNLGTNRFS 299 (1007)
Q Consensus 221 ~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~lp~~~~~~l~~L~~L~Ls~N~l~ 299 (1007)
.+|++.. -+|..+..+..|..||||+|++.. .|..+...+++-.|+|++|+| .+||..++.++..|-+||||+|++.
T Consensus 86 R~N~LKnsGiP~diF~l~dLt~lDLShNqL~E-vP~~LE~AKn~iVLNLS~N~I-etIPn~lfinLtDLLfLDLS~NrLe 163 (1255)
T KOG0444|consen 86 RDNNLKNSGIPTDIFRLKDLTILDLSHNQLRE-VPTNLEYAKNSIVLNLSYNNI-ETIPNSLFINLTDLLFLDLSNNRLE 163 (1255)
T ss_pred hccccccCCCCchhcccccceeeecchhhhhh-cchhhhhhcCcEEEEcccCcc-ccCCchHHHhhHhHhhhccccchhh
Confidence 9999863 478888899999999999999974 567777778888888888888 5788888878888888888888887
Q ss_pred CCCCccccccCCCCEEEecCCCcCCCCCcccccccccccccccccccccCCCCccccccccccccccEEEccCCCCCCCC
Q 001838 300 GNIPSSITNASKLTVFQLRGNSFSGFIPNTIGNLRNLEFLNIADNYLTSSTPELSFLSSLTNCQKIRVLILAGNPLDGIL 379 (1007)
Q Consensus 300 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~ 379 (1007)
.+|..+..+..|+.|+|++|.+...--.-+..+++|++|.+++.+=+- ..+
T Consensus 164 -~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl----------------------------~N~ 214 (1255)
T KOG0444|consen 164 -MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTL----------------------------DNI 214 (1255)
T ss_pred -hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchh----------------------------hcC
Confidence 456667777777888888777654332333445555555555443221 124
Q ss_pred CCCccccccccceeeeccccccccCChhhhccCCCcEEEccCCeeccccchhhhhccccCccccCCCccCCCCchhhhcc
Q 001838 380 PSSIGNLSISLERFQMFNCRISGKIPQVISNLSNLLLLDLGGNKLTGSIPVTFSRLLNLQGLGLAFNKLARSIPDEICHL 459 (1007)
Q Consensus 380 p~~~~~l~~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 459 (1007)
|.++.++. +|..++++.|.+. .+|+.+.++.+|+.|+||+|+|+ .+........+|++|+||.|+|+ .+|+.++.+
T Consensus 215 Ptsld~l~-NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL 290 (1255)
T KOG0444|consen 215 PTSLDDLH-NLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKL 290 (1255)
T ss_pred CCchhhhh-hhhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhh
Confidence 44454444 5555555555555 78889999999999999999998 56667778889999999999997 689999999
Q ss_pred cccceeeccccccc-CCCCCCCCCcccCceeecCCcccccCCCcccccccccccccCCCCCcCCCCccccccccccceEe
Q 001838 460 AKLDKLILHGNKFS-GAIPSCSGNLTSLRALYLGSNRFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELN 538 (1007)
Q Consensus 460 ~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~Ldls~N~l~~~~~~~~~~l~~L~~L~ 538 (1007)
++|+.|.+.+|++. .-+|+.++.+.+|+.+..++|.+. ..|..++.+..|+.|.|+.|++- .+|..+--++.|..||
T Consensus 291 ~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLD 368 (1255)
T KOG0444|consen 291 TKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLD 368 (1255)
T ss_pred HHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceee
Confidence 99999999999987 347888999999999999999886 56777776666666666666554 2344444444444444
Q ss_pred Cccc
Q 001838 539 LSRN 542 (1007)
Q Consensus 539 Ls~N 542 (1007)
|..|
T Consensus 369 lreN 372 (1255)
T KOG0444|consen 369 LREN 372 (1255)
T ss_pred ccCC
Confidence 4444
No 96
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1.4e-32 Score=306.91 Aligned_cols=230 Identities=22% Similarity=0.285 Sum_probs=182.2
Q ss_pred ceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecCCC
Q 001838 732 NLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNG 807 (1007)
Q Consensus 732 ~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~g 807 (1007)
+.||+|+||.||+|+.. +|+.||+|+++... ......+.+|++++++++||||++++++|...+..|+||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 46999999999999865 68999999997643 234456788999999999999999999999999999999999999
Q ss_pred ChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCccccccc
Q 001838 808 SLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQ 875 (1007)
Q Consensus 808 sL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~~~~ 875 (1007)
+|.+++.... .+++..+..++.|++.||+|| |+.+|+|||++ ||+|||+++....... ....
T Consensus 81 ~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~L---H~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~--~~~~ 154 (323)
T cd05595 81 ELFFHLSRER-VFTEERARFYGAEIVSALEYL---HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA--TMKT 154 (323)
T ss_pred cHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCC--cccc
Confidence 9999887654 488999999999999999999 57799999774 8999999986432211 1234
Q ss_pred ccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhhHH
Q 001838 876 TLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYFA 955 (1007)
Q Consensus 876 ~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 955 (1007)
..||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..+ . .......
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~--~~~---~--------~~~~~~~-------- 213 (323)
T cd05595 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER--LFE---L--------ILMEEIR-------- 213 (323)
T ss_pred ccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHH--HHH---H--------HhcCCCC--------
Confidence 569999999999988899999999999999999999999997532111 000 0 0000000
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCC-----CHHHHHHH
Q 001838 956 AKEQSLLSILNLATECTIESPGKRI-----NAREIVTG 988 (1007)
Q Consensus 956 ~~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~evl~~ 988 (1007)
.+.....++.+++.+||+.||++|| ++.|++++
T Consensus 214 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 214 FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred CCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence 0011234688999999999999998 88888764
No 97
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1.5e-32 Score=296.26 Aligned_cols=240 Identities=22% Similarity=0.375 Sum_probs=189.0
Q ss_pred ccccccceecccCceEEEEEEEcCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecC
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMP 805 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~ 805 (1007)
++|...+.||+|+||+||+|...++..||||.+..... ..+.+.+|+.++++++||||+++++++...+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS 82 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcc-cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence 35778899999999999999987777899999875432 23678999999999999999999999999889999999999
Q ss_pred CCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCccccc
Q 001838 806 NGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLSMQ 873 (1007)
Q Consensus 806 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~~~~~ 873 (1007)
+|+|.+++......+++..+..++.||+.|++|| |+.+++|+++ +|++|||.++....... ...
T Consensus 83 ~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~-~~~ 158 (256)
T cd05113 83 NGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYL---ESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEY-TSS 158 (256)
T ss_pred CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeccccCcceEEEcCCCCEEECCCccceecCCCce-eec
Confidence 9999999986555689999999999999999999 5778999865 48999999987643221 111
Q ss_pred ccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhh
Q 001838 874 TQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEER 952 (1007)
Q Consensus 874 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~ 952 (1007)
....++..|+|||+.....++.++|||||||++|||++ |+.||...... .....+... .....
T Consensus 159 ~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~--~~~~~~~~~------------~~~~~-- 222 (256)
T cd05113 159 VGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNS--ETVEKVSQG------------LRLYR-- 222 (256)
T ss_pred CCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHH--HHHHHHhcC------------CCCCC--
Confidence 23346678999999988889999999999999999999 99998753211 111111000 00000
Q ss_pred hHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 001838 953 YFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLL 990 (1007)
Q Consensus 953 ~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~ 990 (1007)
+......+.+++.+||+.+|++||++.++++.++
T Consensus 223 ----~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 223 ----PHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred ----CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 0011346899999999999999999999998764
No 98
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3e-33 Score=300.92 Aligned_cols=242 Identities=19% Similarity=0.288 Sum_probs=191.2
Q ss_pred ccccccceecccCceEEEEEEEcCCceEEEEEechh--hHHHHHHHHHHHHHHHhcC-CCceeEEEEEEecCCeeEEEEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQDGMEVAVKVFHQR--YERALKSFQDECEVMKRIR-HRNLVKIISACSNDDFKALIME 802 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~E 802 (1007)
..|++.+.||+||.++||++...+.+.+|+|++... +.+....|.+|++.|.+++ |.+||++++|-..++..|+|||
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE 440 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME 440 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee
Confidence 358888999999999999999888888898877543 4566788999999999996 9999999999999999999999
Q ss_pred ecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc-----------ccceeecceecCCCCccc
Q 001838 803 YMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA-----------HISDFSIAKFLNGQDQLS 871 (1007)
Q Consensus 803 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~-----------kl~DFGla~~~~~~~~~~ 871 (1007)
|-+ -+|.++|.++....+...++.|..|++.|+.++ |..+|||.|++ ||+|||+|..+..+....
T Consensus 441 ~Gd-~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~I---H~~gIVHSDLKPANFLlVkG~LKLIDFGIA~aI~~DTTsI 516 (677)
T KOG0596|consen 441 CGD-IDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTI---HQHGIVHSDLKPANFLLVKGRLKLIDFGIANAIQPDTTSI 516 (677)
T ss_pred ccc-ccHHHHHHhccCCCchHHHHHHHHHHHHHHHHH---HHhceeecCCCcccEEEEeeeEEeeeechhcccCccccce
Confidence 865 499999988766555346778999999999999 67899998765 999999999998766555
Q ss_pred ccccccCCcccccccccccC-----------CCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHH
Q 001838 872 MQTQTLATIGYMAPEYGVQG-----------RVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVME 940 (1007)
Q Consensus 872 ~~~~~~gt~~y~aPE~~~~~-----------~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 940 (1007)
.....+||+.||+||.+... +.+.++||||+|||||+|+.|++||..... .|.+ +..
T Consensus 517 ~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n------~~aK------l~a 584 (677)
T KOG0596|consen 517 VKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN------QIAK------LHA 584 (677)
T ss_pred eeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH------HHHH------HHh
Confidence 55667899999999987542 256889999999999999999999975211 1211 122
Q ss_pred HhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 941 VIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 941 ~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
+.|+.-.-... ..++ ..++.++|+.||+.||.+|||+.|+++.
T Consensus 585 I~~P~~~Iefp---~~~~--~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 585 ITDPNHEIEFP---DIPE--NDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred hcCCCcccccc---CCCC--chHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 22221100000 0011 1238999999999999999999999875
No 99
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=2.4e-32 Score=298.57 Aligned_cols=244 Identities=25% Similarity=0.373 Sum_probs=189.6
Q ss_pred hcccccccceecccCceEEEEEEEcC------CceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCe
Q 001838 724 ATDRFSKNNLLGIGSFGSVYVARLQD------GMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVKIISACSNDDF 796 (1007)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~Vy~~~~~~------g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 796 (1007)
++++|...+.||+|+||.||+|...+ +..||+|.+.... ......|.+|+.++++++|+||+++++++.+.+.
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP 83 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence 34678889999999999999998753 5679999886433 3344678999999999999999999999999999
Q ss_pred eEEEEEecCCCChhHhhhcCC------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc---------------ccc
Q 001838 797 KALIMEYMPNGSLENRLYSGT------CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV---------------AHI 855 (1007)
Q Consensus 797 ~~lv~E~~~~gsL~~~l~~~~------~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~---------------~kl 855 (1007)
.++||||+++|+|.+++.... ..+++.++.+++.||+.|++|| |+.+++|+++ +|+
T Consensus 84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~L---H~~~ivH~dlkp~nil~~~~~~~~~~kl 160 (277)
T cd05036 84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYL---EENHFIHRDIAARNCLLTCKGPGRVAKI 160 (277)
T ss_pred cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHH---HHCCEeecccchheEEEeccCCCcceEe
Confidence 999999999999999997542 2588999999999999999999 5678999854 479
Q ss_pred ceeecceecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhc
Q 001838 856 SDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLL 934 (1007)
Q Consensus 856 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~ 934 (1007)
+|||+++................+..|+|||++.+..++.++|||||||++|||++ |+.||+.....+ +..
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~--~~~------ 232 (277)
T cd05036 161 ADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQE--VME------ 232 (277)
T ss_pred ccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH--HHH------
Confidence 99999987643222111122334568999999988889999999999999999997 999997532211 111
Q ss_pred CccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 001838 935 PISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLL 990 (1007)
Q Consensus 935 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~ 990 (1007)
.+....... .+...+.++.+++.+|++.+|++||++.||+++|+
T Consensus 233 ------~~~~~~~~~------~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 233 ------FVTGGGRLD------PPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred ------HHHcCCcCC------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 111100000 01122346889999999999999999999999986
No 100
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-33 Score=292.84 Aligned_cols=247 Identities=25% Similarity=0.352 Sum_probs=188.1
Q ss_pred HHhcccccccceecccCceEEEEEEEc-CCceEEEEEechhhHH--------------HHHHHHHHHHHHHhcCCCceeE
Q 001838 722 LQATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYER--------------ALKSFQDECEVMKRIRHRNLVK 786 (1007)
Q Consensus 722 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~--------------~~~~~~~E~~~l~~l~H~niv~ 786 (1007)
.+..++|...+.||+|.||+|-+|+.. +++.||||++.+.... ..+...+|+.+|++++|||||+
T Consensus 93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~ 172 (576)
T KOG0585|consen 93 RKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVK 172 (576)
T ss_pred ceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeE
Confidence 345678999999999999999999965 6999999999754210 1247789999999999999999
Q ss_pred EEEEEecC--CeeEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc-----------
Q 001838 787 IISACSND--DFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA----------- 853 (1007)
Q Consensus 787 l~~~~~~~--~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~----------- 853 (1007)
|+++..++ +..|||+|||..|.+...=.. ...+...++++|+.+++.||+|| |.++|||||++
T Consensus 173 LiEvLDDP~s~~~YlVley~s~G~v~w~p~d-~~els~~~Ar~ylrDvv~GLEYL---H~QgiiHRDIKPsNLLl~~~g~ 248 (576)
T KOG0585|consen 173 LIEVLDDPESDKLYLVLEYCSKGEVKWCPPD-KPELSEQQARKYLRDVVLGLEYL---HYQGIIHRDIKPSNLLLSSDGT 248 (576)
T ss_pred EEEeecCcccCceEEEEEeccCCccccCCCC-cccccHHHHHHHHHHHHHHHHHH---HhcCeeccccchhheEEcCCCc
Confidence 99999775 479999999999987643222 22388899999999999999999 67899999875
Q ss_pred -ccceeecceecCCCC---cccccccccCCcccccccccccCC----CCchhhHHHHHHHHHHHHhCCCCCCccccCcch
Q 001838 854 -HISDFSIAKFLNGQD---QLSMQTQTLATIGYMAPEYGVQGR----VSTRGDVYSYGIMLMETFTGKKPTDEIFIGELS 925 (1007)
Q Consensus 854 -kl~DFGla~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~ 925 (1007)
||+|||.+....... ........+|||.|||||...++. .+.+.||||+||+||.|+.|+.||-+.+.
T Consensus 249 VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~---- 324 (576)
T KOG0585|consen 249 VKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFE---- 324 (576)
T ss_pred EEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchH----
Confidence 999999998763211 111123478999999999887632 36688999999999999999999975321
Q ss_pred HHHHHHhhcCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 001838 926 LSRWVNDLLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLK 991 (1007)
Q Consensus 926 l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~ 991 (1007)
.+..|+.....-. .+..++...++.+|+.++|+.||++|.+..||..+...
T Consensus 325 -------------~~l~~KIvn~pL~--fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwv 375 (576)
T KOG0585|consen 325 -------------LELFDKIVNDPLE--FPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWV 375 (576)
T ss_pred -------------HHHHHHHhcCccc--CCCcccccHHHHHHHHHHhhcChhheeehhhheeccee
Confidence 1222221111100 01112345678999999999999999999999877653
No 101
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=7.9e-33 Score=314.83 Aligned_cols=241 Identities=21% Similarity=0.306 Sum_probs=186.1
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIM 801 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 801 (1007)
++|+..+.||+|+||+||+|+.. +|+.||||++.... ......+.+|+++++.++||||++++++|.+++..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 46889999999999999999976 58999999997643 234466889999999999999999999999999999999
Q ss_pred EecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCc
Q 001838 802 EYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQ 869 (1007)
Q Consensus 802 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~ 869 (1007)
|||++|+|.+++.... .+++..+..++.|++.||+|| |+.+|+|||++ ||+|||+++.+.....
T Consensus 81 E~~~~g~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~l---H~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 156 (364)
T cd05599 81 EYLPGGDMMTLLMKKD-TFTEEETRFYIAETILAIDSI---HKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHR 156 (364)
T ss_pred CCCCCcHHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeEeccCCHHHeEECCCCCEEEeecccceecccccc
Confidence 9999999999997654 488899999999999999999 57789999774 8999999986532110
Q ss_pred cc------------------------------------ccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCC
Q 001838 870 LS------------------------------------MQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGK 913 (1007)
Q Consensus 870 ~~------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~ 913 (1007)
.. .....+||+.|+|||++....++.++|||||||++|||++|+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~ 236 (364)
T cd05599 157 TEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGY 236 (364)
T ss_pred ccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCC
Confidence 00 011246999999999998889999999999999999999999
Q ss_pred CCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCC---HHHHHHH
Q 001838 914 KPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRIN---AREIVTG 988 (1007)
Q Consensus 914 ~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt---~~evl~~ 988 (1007)
.||......+ ....+.... ....... ......++.+++.+|+. +|.+|++ +.|++++
T Consensus 237 ~Pf~~~~~~~--~~~~i~~~~---------~~~~~~~------~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h 296 (364)
T cd05599 237 PPFCSDNPQE--TYRKIINWK---------ETLQFPD------EVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH 296 (364)
T ss_pred CCCCCCCHHH--HHHHHHcCC---------CccCCCC------CCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence 9997532111 111000000 0000000 00113457888889986 8999998 8888775
No 102
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=2.9e-32 Score=301.51 Aligned_cols=245 Identities=26% Similarity=0.385 Sum_probs=191.7
Q ss_pred ccccccceecccCceEEEEEEEc------CCceEEEEEechhh-HHHHHHHHHHHHHHHhc-CCCceeEEEEEEecCCee
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ------DGMEVAVKVFHQRY-ERALKSFQDECEVMKRI-RHRNLVKIISACSNDDFK 797 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~ 797 (1007)
++|...+.||+|+||.||+|... ++..||||+++... ....+.+.+|+++++++ +||||+++++++...+..
T Consensus 35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 114 (302)
T cd05055 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPI 114 (302)
T ss_pred HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCce
Confidence 56888999999999999999742 35689999987543 34456789999999999 799999999999999999
Q ss_pred EEEEEecCCCChhHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceec
Q 001838 798 ALIMEYMPNGSLENRLYSGT-CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFL 864 (1007)
Q Consensus 798 ~lv~E~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~ 864 (1007)
++||||+++|+|.+++++.. ..+++.++..++.|++.|++|| |+.+|+|++++ |++|||+++..
T Consensus 115 ~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~l---H~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~ 191 (302)
T cd05055 115 LVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNVLLTHGKIVKICDFGLARDI 191 (302)
T ss_pred EEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHH---HHCCeehhhhccceEEEcCCCeEEECCCcccccc
Confidence 99999999999999997543 3489999999999999999999 56789999764 79999999876
Q ss_pred CCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHHHHhh
Q 001838 865 NGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEVID 943 (1007)
Q Consensus 865 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d 943 (1007)
.............++..|+|||++....++.++|||||||++|||++ |+.||......+ ...+.. +
T Consensus 192 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~-~~~~~~------------~ 258 (302)
T cd05055 192 MNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS-KFYKLI------------K 258 (302)
T ss_pred cCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH-HHHHHH------------H
Confidence 43322212223356788999999988889999999999999999998 999987542211 111111 1
Q ss_pred hhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHH
Q 001838 944 TNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKI 992 (1007)
Q Consensus 944 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i 992 (1007)
....... +.....++.+++.+|+..+|++|||+.|+++.|++.
T Consensus 259 ~~~~~~~------~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 259 EGYRMAQ------PEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred cCCcCCC------CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 1000000 001134689999999999999999999999999864
No 103
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=2.5e-32 Score=299.48 Aligned_cols=256 Identities=24% Similarity=0.338 Sum_probs=190.8
Q ss_pred cc-cccceecccCceEEEEEEE-----cCCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecC--Cee
Q 001838 727 RF-SKNNLLGIGSFGSVYVARL-----QDGMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVKIISACSND--DFK 797 (1007)
Q Consensus 727 ~~-~~~~~ig~G~~g~Vy~~~~-----~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~ 797 (1007)
+| +..+.||+|+||+||++.. .++..||+|.++... ....+.+.+|++++++++||||+++++++... ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (283)
T cd05080 4 RYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGL 83 (283)
T ss_pred hhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceE
Confidence 44 7889999999999988653 357889999997543 33456788999999999999999999988754 368
Q ss_pred EEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecC
Q 001838 798 ALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLN 865 (1007)
Q Consensus 798 ~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~ 865 (1007)
++||||+++|+|.+++... .+++.++..++.|++.|++|| |+.+|+|++++ |++|||+++...
T Consensus 84 ~lv~e~~~~~~l~~~~~~~--~l~~~~~~~i~~~l~~~l~~l---H~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 158 (283)
T cd05080 84 QLIMEYVPLGSLRDYLPKH--KLNLAQLLLFAQQICEGMAYL---HSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 158 (283)
T ss_pred EEEecCCCCCCHHHHHHHc--CCCHHHHHHHHHHHHHHHHHH---HHCCeeccccChheEEEcCCCcEEEeecccccccC
Confidence 9999999999999999764 389999999999999999999 56789999764 899999998765
Q ss_pred CCCcc-cccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhh-cCccHHHHhh
Q 001838 866 GQDQL-SMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDL-LPISVMEVID 943 (1007)
Q Consensus 866 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~-~~~~~~~~~d 943 (1007)
..... .......++..|+|||.+....++.++|||||||++|||+||+.|+............+.... ......+.++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (283)
T cd05080 159 EGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLE 238 (283)
T ss_pred CcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhh
Confidence 33221 111223456789999999888899999999999999999999999865322111111111000 0011111111
Q ss_pred hhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHH
Q 001838 944 TNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKIR 993 (1007)
Q Consensus 944 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~ 993 (1007)
..... +.+...+.++.+++.+||+.+|++|||+++|++.|+++.
T Consensus 239 ~~~~~------~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 239 RGMRL------PCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred cCCCC------CCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 11110 011123457999999999999999999999999999875
No 104
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.5e-32 Score=313.79 Aligned_cols=241 Identities=21% Similarity=0.301 Sum_probs=182.7
Q ss_pred cccccceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEE
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIME 802 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E 802 (1007)
.|...+.||+|+||+||+|+.. +++.||||++.... ....+.+.+|++++++++|||||++++++.+.+..|+|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 5788899999999999999865 58899999997643 2345678999999999999999999999999999999999
Q ss_pred ecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCc-
Q 001838 803 YMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQ- 869 (1007)
Q Consensus 803 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~- 869 (1007)
||++|+|.+++.+.. .+++..+..++.|++.||+|| |+.+|+|||++ ||+|||+++.......
T Consensus 82 ~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~aL~~L---H~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~ 157 (381)
T cd05626 82 YIPGGDMMSLLIRME-VFPEVLARFYIAELTLAIESV---HKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNS 157 (381)
T ss_pred cCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCeeecCCcHHHEEECCCCCEEEeeCcCCccccccccc
Confidence 999999999997654 478888888999999999999 57899999764 8999999864311000
Q ss_pred --------------------------------------------ccccccccCCcccccccccccCCCCchhhHHHHHHH
Q 001838 870 --------------------------------------------LSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIM 905 (1007)
Q Consensus 870 --------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvi 905 (1007)
........||+.|+|||++....++.++|||||||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~i 237 (381)
T cd05626 158 KYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVI 237 (381)
T ss_pred ccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhH
Confidence 000123469999999999988889999999999999
Q ss_pred HHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhh--cCCCCCCCCCCHH
Q 001838 906 LMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATE--CTIESPGKRINAR 983 (1007)
Q Consensus 906 l~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~--cl~~~p~~Rpt~~ 983 (1007)
+|||+||+.||......+.. ...... ........ ......++.+++.+ |+..+|.+||++.
T Consensus 238 l~elltG~~Pf~~~~~~~~~-~~i~~~----------~~~~~~~~------~~~~s~~~~dli~~ll~~~~~~~~R~~~~ 300 (381)
T cd05626 238 LFEMLVGQPPFLAPTPTETQ-LKVINW----------ENTLHIPP------QVKLSPEAVDLITKLCCSAEERLGRNGAD 300 (381)
T ss_pred HHHHHhCCCCCcCCCHHHHH-HHHHcc----------ccccCCCC------CCCCCHHHHHHHHHHccCcccccCCCCHH
Confidence 99999999999753221110 000000 00000000 00113356777777 5566777799999
Q ss_pred HHHHH
Q 001838 984 EIVTG 988 (1007)
Q Consensus 984 evl~~ 988 (1007)
|++++
T Consensus 301 ~~l~h 305 (381)
T cd05626 301 DIKAH 305 (381)
T ss_pred HHhcC
Confidence 99876
No 105
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-33 Score=293.87 Aligned_cols=236 Identities=22% Similarity=0.305 Sum_probs=197.8
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY--ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIME 802 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E 802 (1007)
.-|+..+.||+|-|++|-.|++- +|..||||++++.. ......+.+|++.|+-++|||||++|++.......|||+|
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLE 97 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE 97 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEE
Confidence 45777889999999999999855 79999999998654 3345678899999999999999999999999999999999
Q ss_pred ecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc-------------ccceeecceecCCCCc
Q 001838 803 YMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA-------------HISDFSIAKFLNGQDQ 869 (1007)
Q Consensus 803 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~-------------kl~DFGla~~~~~~~~ 869 (1007)
+-++|+|++|+.++...+.+....+++.||+.|+.|+|.. .+||||++ |+.|||++-...+...
T Consensus 98 LGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~k 174 (864)
T KOG4717|consen 98 LGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKK 174 (864)
T ss_pred ecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeeccccccCCCcch
Confidence 9999999999998888899999999999999999999654 48999764 8999999987655443
Q ss_pred ccccccccCCcccccccccccCCCC-chhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhcc
Q 001838 870 LSMQTQTLATIGYMAPEYGVQGRVS-TRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLS 948 (1007)
Q Consensus 870 ~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~ 948 (1007)
.+..+|+..|-|||++.+..|+ +++||||+|||||.|++|+.||+...+.+. +.-++|-..
T Consensus 175 ---L~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSET-------------LTmImDCKY-- 236 (864)
T KOG4717|consen 175 ---LTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSET-------------LTMIMDCKY-- 236 (864)
T ss_pred ---hhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhh-------------hhhhhcccc--
Confidence 3567999999999999999886 579999999999999999999997654332 122233211
Q ss_pred chhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 949 GEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 949 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
..+.....++.+|+..|++.||++|.+..||+..
T Consensus 237 ------tvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~ 270 (864)
T KOG4717|consen 237 ------TVPSHVSKECRDLIQSMLVRDPKKRASLEEIVST 270 (864)
T ss_pred ------cCchhhhHHHHHHHHHHHhcCchhhccHHHHhcc
Confidence 2234456789999999999999999999998754
No 106
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.6e-32 Score=321.42 Aligned_cols=244 Identities=22% Similarity=0.295 Sum_probs=190.9
Q ss_pred HHhcccccccceecccCceEEEEEEEc-CCceEEEEEechh--hHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCC---
Q 001838 722 LQATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQR--YERALKSFQDECEVMKRIRHRNLVKIISACSNDD--- 795 (1007)
Q Consensus 722 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--- 795 (1007)
....++|...+.||+|+||+||+|+.. +|+.||||++... .......+.+|+.++..++|+||+++++.+...+
T Consensus 28 ~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~ 107 (496)
T PTZ00283 28 KEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRN 107 (496)
T ss_pred cccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccC
Confidence 344578999999999999999999854 6999999998653 2444567889999999999999999988775432
Q ss_pred -----eeEEEEEecCCCChhHhhhcC---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------cc
Q 001838 796 -----FKALIMEYMPNGSLENRLYSG---TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HI 855 (1007)
Q Consensus 796 -----~~~lv~E~~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl 855 (1007)
..++||||+++|+|.+++... ...+++..+..++.|++.||+|| |+.+|+|||++ ||
T Consensus 108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~l---H~~~IiHrDLKP~NILl~~~~~vkL 184 (496)
T PTZ00283 108 PENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHV---HSKHMIHRDIKSANILLCSNGLVKL 184 (496)
T ss_pred cccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHEEEeCCCCEEE
Confidence 368999999999999998643 24588889999999999999999 67899999764 89
Q ss_pred ceeecceecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcC
Q 001838 856 SDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLP 935 (1007)
Q Consensus 856 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~ 935 (1007)
+|||+++...............||+.|+|||++....++.++|||||||++|||++|+.||.... ...++...
T Consensus 185 ~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~-----~~~~~~~~-- 257 (496)
T PTZ00283 185 GDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGEN-----MEEVMHKT-- 257 (496)
T ss_pred EecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHH--
Confidence 99999987653322222345679999999999999899999999999999999999999997532 11111111
Q ss_pred ccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 936 ISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 936 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
...... +.+.....++.+++.+||+.||++||++.|++++
T Consensus 258 ----------~~~~~~---~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 258 ----------LAGRYD---PLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred ----------hcCCCC---CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 100000 0011224568899999999999999999999875
No 107
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=2.4e-32 Score=310.23 Aligned_cols=190 Identities=22% Similarity=0.350 Sum_probs=162.1
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIM 801 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 801 (1007)
++|+..+.||+|+||+||+|+.. +++.||||+++... ......+.+|+.++.+++||||+++++++.+.+..|+||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 46888999999999999999865 58999999997543 233467888999999999999999999999999999999
Q ss_pred EecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCc
Q 001838 802 EYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQ 869 (1007)
Q Consensus 802 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~ 869 (1007)
|||++|+|.+++.+.. .+++..+..++.|++.||+|| |+.+|+|||++ ||+|||+++.......
T Consensus 81 E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~l---H~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~ 156 (363)
T cd05628 81 EFLPGGDMMTLLMKKD-TLTEEETQFYIAETVLAIDSI---HQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHR 156 (363)
T ss_pred cCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCeEecCCCHHHeEECCCCCEEEeeccCccccccccc
Confidence 9999999999997654 588999999999999999999 67899999774 8999999986532110
Q ss_pred c---------------------------------cccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCC
Q 001838 870 L---------------------------------SMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPT 916 (1007)
Q Consensus 870 ~---------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~ 916 (1007)
. ......+||+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf 236 (363)
T cd05628 157 TEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPF 236 (363)
T ss_pred ccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCC
Confidence 0 0012357999999999999889999999999999999999999999
Q ss_pred Ccc
Q 001838 917 DEI 919 (1007)
Q Consensus 917 ~~~ 919 (1007)
...
T Consensus 237 ~~~ 239 (363)
T cd05628 237 CSE 239 (363)
T ss_pred CCC
Confidence 753
No 108
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=2.6e-32 Score=298.25 Aligned_cols=245 Identities=24% Similarity=0.378 Sum_probs=189.3
Q ss_pred hcccccccceecccCceEEEEEEEc------CCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCe
Q 001838 724 ATDRFSKNNLLGIGSFGSVYVARLQ------DGMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVKIISACSNDDF 796 (1007)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~Vy~~~~~------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 796 (1007)
++++|+..+.||+|+||+||+|... ++..||||++.... .....++.+|+.++++++||||+++++++.+++.
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4578999999999999999999753 25679999986432 2344678999999999999999999999999999
Q ss_pred eEEEEEecCCCChhHhhhcCC---------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------ccc
Q 001838 797 KALIMEYMPNGSLENRLYSGT---------CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHI 855 (1007)
Q Consensus 797 ~~lv~E~~~~gsL~~~l~~~~---------~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl 855 (1007)
.++||||+++|+|.+++.+.. ...++..+..++.|++.|++|| |+.+++|+++ +|+
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l---H~~~~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYL---NANKFVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCcchheEEEcCCCCEEE
Confidence 999999999999999986532 2357788899999999999999 5678999976 389
Q ss_pred ceeecceecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhc
Q 001838 856 SDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLL 934 (1007)
Q Consensus 856 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~ 934 (1007)
+|||+++...............+++.|+|||++....++.++|||||||++|||++ |+.||...... ...+++..
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~--~~~~~~~~-- 236 (277)
T cd05062 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE--QVLRFVME-- 236 (277)
T ss_pred CCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHc--
Confidence 99999986643322222223356788999999988889999999999999999999 78888653211 11111100
Q ss_pred CccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 001838 935 PISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLK 991 (1007)
Q Consensus 935 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~ 991 (1007)
..... .+...+..+.+++.+|++.+|++|||+.|++++|++
T Consensus 237 ---------~~~~~-------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 237 ---------GGLLD-------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred ---------CCcCC-------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 00000 001123468999999999999999999999998863
No 109
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=3.7e-32 Score=298.29 Aligned_cols=253 Identities=28% Similarity=0.396 Sum_probs=192.3
Q ss_pred ccccccceecccCceEEEEEEEc-----CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecC--CeeE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-----DGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSND--DFKA 798 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-----~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~ 798 (1007)
.+|+..+.||+|+||+||+|..+ ++..||||++........+.+.+|++++++++||||+++++++... ...+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 46888899999999999999743 4789999999876666667899999999999999999999987543 4689
Q ss_pred EEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCC
Q 001838 799 LIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNG 866 (1007)
Q Consensus 799 lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~ 866 (1007)
+||||+++|+|.+++.+....+++..+..++.|++.||+|| |+.+|+|++++ ||+|||+++....
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~L---H~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~ 160 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYL---GSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQ 160 (284)
T ss_pred EEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHH---HHCCceeccCCHhhEEECCCCeEEECCCcccccccC
Confidence 99999999999999976655689999999999999999999 57799999764 8999999997754
Q ss_pred CCccc-ccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCc--------c
Q 001838 867 QDQLS-MQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPI--------S 937 (1007)
Q Consensus 867 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~--------~ 937 (1007)
..... ......++..|+|||+..+..++.++|||||||++|||++|..|+..... .|....... .
T Consensus 161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 234 (284)
T cd05081 161 DKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPA------EFMRMMGNDKQGQMIVYH 234 (284)
T ss_pred CCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcch------hhhhhcccccccccchHH
Confidence 32211 11222345579999999888899999999999999999999877543211 111111110 0
Q ss_pred HHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHH
Q 001838 938 VMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKIR 993 (1007)
Q Consensus 938 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~ 993 (1007)
..+.+..... .+.....+.++.+++.+||+.+|++||||.||++.|++++
T Consensus 235 ~~~~~~~~~~------~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~~ 284 (284)
T cd05081 235 LIELLKNNGR------LPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAIR 284 (284)
T ss_pred HHHHHhcCCc------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhcC
Confidence 1111111000 0011122456899999999999999999999999998763
No 110
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=1.5e-32 Score=307.94 Aligned_cols=233 Identities=20% Similarity=0.258 Sum_probs=186.2
Q ss_pred ccccccceecccCceEEEEEEEcC--CceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQD--GMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALI 800 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~~--g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 800 (1007)
++|...+.||+|+||+||+|..+. +..||+|++.... ....+.+.+|+++++.++|||||++++++.+++..|+|
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 109 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV 109 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence 468889999999999999998653 3689999997542 23456788999999999999999999999999999999
Q ss_pred EEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCC
Q 001838 801 MEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQD 868 (1007)
Q Consensus 801 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~ 868 (1007)
||||++|+|.+++.+.. .+++..+..++.|++.||+|| |+.+|+|||++ ||+|||+++.....
T Consensus 110 ~Ey~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~aL~~L---H~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~- 184 (340)
T PTZ00426 110 LEFVIGGEFFTFLRRNK-RFPNDVGCFYAAQIVLIFEYL---QSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR- 184 (340)
T ss_pred EeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCCC-
Confidence 99999999999997654 488889999999999999999 57899999764 89999999876422
Q ss_pred cccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhcc
Q 001838 869 QLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLS 948 (1007)
Q Consensus 869 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~ 948 (1007)
.....||+.|||||++.+..++.++|||||||++|||++|+.||...... .... .+.......
T Consensus 185 ----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~--~~~~-----------~i~~~~~~~ 247 (340)
T PTZ00426 185 ----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL--LIYQ-----------KILEGIIYF 247 (340)
T ss_pred ----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH--HHHH-----------HHhcCCCCC
Confidence 13457999999999998888999999999999999999999999753210 0000 000000000
Q ss_pred chhhhHHHHHHHHHHHHHHHhhcCCCCCCCCC-----CHHHHHHH
Q 001838 949 GEERYFAAKEQSLLSILNLATECTIESPGKRI-----NAREIVTG 988 (1007)
Q Consensus 949 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~evl~~ 988 (1007)
+......+.+++.+|++.||++|+ +++|++++
T Consensus 248 --------p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 248 --------PKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred --------CCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 011133578999999999999995 88888765
No 111
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=3.4e-32 Score=298.36 Aligned_cols=243 Identities=27% Similarity=0.425 Sum_probs=188.8
Q ss_pred ccccccceecccCceEEEEEEE-----cCCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARL-----QDGMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKAL 799 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~-----~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 799 (1007)
++|+..+.||+|+||+||+|.. .++..||+|.+.... ......+.+|++++++++||||+++++++..++..|+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 4577789999999999999974 246789999997433 3445678999999999999999999999999999999
Q ss_pred EEEecCCCChhHhhhcC----------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc----------
Q 001838 800 IMEYMPNGSLENRLYSG----------------TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA---------- 853 (1007)
Q Consensus 800 v~E~~~~gsL~~~l~~~----------------~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~---------- 853 (1007)
||||+++|+|.+++... ...+++.+...++.|++.||+|| |+++|+|++++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~l---H~~~i~H~dlkp~nili~~~~ 161 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYL---SSHFFVHKDLAARNILIGEQL 161 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHH---HhcCeehhccccceEEEcCCC
Confidence 99999999999998532 12478888999999999999999 56789999764
Q ss_pred --ccceeecceecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHH
Q 001838 854 --HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWV 930 (1007)
Q Consensus 854 --kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~ 930 (1007)
|++|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||..... ..+.+.+
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~--~~~~~~~ 239 (283)
T cd05090 162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN--QEVIEMV 239 (283)
T ss_pred cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHH
Confidence 8999999987643332222334456778999999988889999999999999999999 9999864211 1111111
Q ss_pred HhhcCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 001838 931 NDLLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLK 991 (1007)
Q Consensus 931 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~ 991 (1007)
...... +.+.....++.+++.+|++.||++||++.+|.++|..
T Consensus 240 ------------~~~~~~------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 240 ------------RKRQLL------PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred ------------HcCCcC------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 110000 0011123468889999999999999999999998863
No 112
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=2.2e-32 Score=299.92 Aligned_cols=239 Identities=21% Similarity=0.310 Sum_probs=186.7
Q ss_pred cccccceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEE
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIME 802 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E 802 (1007)
.|+..+.||+|+||+||++... +++.||||++.... ......+.+|+.++++++||||+++++++..++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 3777899999999999999865 68999999997543 2223567889999999999999999999999999999999
Q ss_pred ecCCCChhHhhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCc
Q 001838 803 YMPNGSLENRLYSG-TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQ 869 (1007)
Q Consensus 803 ~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~ 869 (1007)
|+++|+|.+++... ...+++..+..++.|++.|++|| |+.+|+|++++ +|+|||+++.......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 157 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDL---HRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGET 157 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHH---HHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCc
Confidence 99999999988653 34589999999999999999999 56789999763 7999999987643221
Q ss_pred ccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccc
Q 001838 870 LSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSG 949 (1007)
Q Consensus 870 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~ 949 (1007)
.....|++.|+|||++....++.++||||+||++|||++|+.||....... ....+ ...+....
T Consensus 158 ---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~-~~~~~---------~~~~~~~~--- 221 (285)
T cd05605 158 ---IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKV-KREEV---------ERRVKEDQ--- 221 (285)
T ss_pred ---cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhh-HHHHH---------HHHhhhcc---
Confidence 123468999999999988889999999999999999999999997532110 00000 01110000
Q ss_pred hhhhHHHHHHHHHHHHHHHhhcCCCCCCCCC-----CHHHHHHH
Q 001838 950 EERYFAAKEQSLLSILNLATECTIESPGKRI-----NAREIVTG 988 (1007)
Q Consensus 950 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~evl~~ 988 (1007)
. ..+......+.+++.+|++.||++|| ++.|++++
T Consensus 222 -~---~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 222 -E---EYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred -c---ccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 0 00112345688999999999999999 78888765
No 113
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=1.9e-32 Score=309.86 Aligned_cols=235 Identities=23% Similarity=0.366 Sum_probs=178.9
Q ss_pred cccccceecccCceEEEEEEEc-CCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEec
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYM 804 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~ 804 (1007)
+|+..+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|++++++++|+|||++++++.+.+..++|||||
T Consensus 75 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 154 (353)
T PLN00034 75 ELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFM 154 (353)
T ss_pred HHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecC
Confidence 4556788999999999999865 68999999986543 344567899999999999999999999999999999999999
Q ss_pred CCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcccc
Q 001838 805 PNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSM 872 (1007)
Q Consensus 805 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~ 872 (1007)
++|+|.+.. ..++..+..++.||+.||+|| |+.+|+|||++ ||+|||+++....... .
T Consensus 155 ~~~~L~~~~-----~~~~~~~~~i~~qi~~aL~~L---H~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~--~ 224 (353)
T PLN00034 155 DGGSLEGTH-----IADEQFLADVARQILSGIAYL---HRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMD--P 224 (353)
T ss_pred CCCcccccc-----cCCHHHHHHHHHHHHHHHHHH---HHCCEeecCCCHHHEEEcCCCCEEEcccccceecccccc--c
Confidence 999987532 245677788999999999999 57789999764 8999999987643211 1
Q ss_pred cccccCCccccccccccc-----CCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhc
Q 001838 873 QTQTLATIGYMAPEYGVQ-----GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLL 947 (1007)
Q Consensus 873 ~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~ 947 (1007)
.....||..|+|||++.. ...+.++|||||||++|||++|+.||....... |... +.....
T Consensus 225 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~-----~~~~---------~~~~~~ 290 (353)
T PLN00034 225 CNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGD-----WASL---------MCAICM 290 (353)
T ss_pred ccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcc-----HHHH---------HHHHhc
Confidence 234579999999998743 234568999999999999999999997322111 1110 000000
Q ss_pred cchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 948 SGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 948 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
... .........++.+++.+||+.||++|||+.|++++
T Consensus 291 ~~~---~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 291 SQP---PEAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred cCC---CCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 00011224568999999999999999999999986
No 114
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=2.3e-32 Score=305.59 Aligned_cols=230 Identities=23% Similarity=0.299 Sum_probs=183.0
Q ss_pred ceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecCCC
Q 001838 732 NLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNG 807 (1007)
Q Consensus 732 ~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~g 807 (1007)
+.||+|+||.||+|+.. +|+.||||++.... ......+.+|++++++++||||+++++++...+..|+||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999865 68999999997542 234567889999999999999999999999999999999999999
Q ss_pred ChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCccccccc
Q 001838 808 SLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQ 875 (1007)
Q Consensus 808 sL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~~~~ 875 (1007)
+|.+++.... .+++.++..++.||+.||+|| |+.+|+|||++ ||+|||+++...... .....
T Consensus 81 ~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~L---H~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~--~~~~~ 154 (328)
T cd05593 81 ELFFHLSRER-VFSEDRTRFYGAEIVSALDYL---HSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA--ATMKT 154 (328)
T ss_pred CHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcc--ccccc
Confidence 9999887653 488999999999999999999 67899999774 899999998643221 11234
Q ss_pred ccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhhHH
Q 001838 876 TLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYFA 955 (1007)
Q Consensus 876 ~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 955 (1007)
..||+.|+|||++.+..++.++|||||||++|||++|+.||...... .......... . .
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~-----~~~~~~~~~~------------~----~ 213 (328)
T cd05593 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----KLFELILMED------------I----K 213 (328)
T ss_pred ccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHH-----HHHHHhccCC------------c----c
Confidence 57999999999998889999999999999999999999999753211 1111100000 0 0
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCC-----CHHHHHHH
Q 001838 956 AKEQSLLSILNLATECTIESPGKRI-----NAREIVTG 988 (1007)
Q Consensus 956 ~~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~evl~~ 988 (1007)
.+.....++.+++.+|++.||++|| ++.|++++
T Consensus 214 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 214 FPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred CCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 0111234688999999999999997 89999875
No 115
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=1.9e-32 Score=302.47 Aligned_cols=249 Identities=24% Similarity=0.377 Sum_probs=192.9
Q ss_pred ccccccceecccCceEEEEEEEcC-Cc--eEEEEEechh-hHHHHHHHHHHHHHHHhc-CCCceeEEEEEEecCCeeEEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQD-GM--EVAVKVFHQR-YERALKSFQDECEVMKRI-RHRNLVKIISACSNDDFKALI 800 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~~-g~--~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv 800 (1007)
++|+..+.||+|+||+||+|..++ +. .+|+|.++.. .....+.+.+|+++++++ +||||+++++++...+..++|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 578889999999999999998753 33 4789888742 234456789999999999 799999999999999999999
Q ss_pred EEecCCCChhHhhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------
Q 001838 801 MEYMPNGSLENRLYSGT---------------CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------ 853 (1007)
Q Consensus 801 ~E~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------ 853 (1007)
|||+++|+|.+++.... ..+++..+..++.|++.|++|| |+.+|+|+|++
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~l---H~~~ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYL---SEKQFIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCcCCcceEEECCCCeE
Confidence 99999999999996532 2478889999999999999999 56789999773
Q ss_pred ccceeecceecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHh
Q 001838 854 HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVND 932 (1007)
Q Consensus 854 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~ 932 (1007)
||+|||++...... ........+..|+|||++....++.++|||||||++|||+| |+.||......+ +..
T Consensus 159 kl~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~-----~~~- 229 (297)
T cd05089 159 KIADFGLSRGEEVY---VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAE-----LYE- 229 (297)
T ss_pred EECCcCCCccccce---eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH-----HHH-
Confidence 89999998743211 11111233567999999988889999999999999999998 999997532111 111
Q ss_pred hcCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhcc
Q 001838 933 LLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKIRDTLVKSV 1000 (1007)
Q Consensus 933 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~~~~~~~~ 1000 (1007)
.+....... .+.....++.+++.+||+.+|.+|||+.+++++|+.+.+..+...
T Consensus 230 --------~~~~~~~~~------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~~~~ 283 (297)
T cd05089 230 --------KLPQGYRME------KPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARKAYV 283 (297)
T ss_pred --------HHhcCCCCC------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcccc
Confidence 111100000 011123468899999999999999999999999999998877654
No 116
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=4.7e-32 Score=296.64 Aligned_cols=249 Identities=24% Similarity=0.378 Sum_probs=193.7
Q ss_pred ccccccceecccCceEEEEEEEc-CCc----eEEEEEechh-hHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGM----EVAVKVFHQR-YERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKAL 799 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 799 (1007)
++|+..+.||+|+||+||+|++. +|+ .||+|+++.. .....+.+.+|+.+++.++||||+++++++... ..++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~l 85 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-TVQL 85 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-CcEE
Confidence 56888899999999999999853 454 4899998753 234456788999999999999999999999764 4689
Q ss_pred EEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCC
Q 001838 800 IMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQ 867 (1007)
Q Consensus 800 v~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~ 867 (1007)
+|||+++|+|.++++.....+++..+..++.|++.||+|| |+.+|+|||+ +||+|||+++.....
T Consensus 86 ~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~l---H~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~ 162 (279)
T cd05109 86 VTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYL---EEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDID 162 (279)
T ss_pred EEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH---HHCCeeccccccceEEEcCCCcEEECCCCceeecccc
Confidence 9999999999999987666689999999999999999999 6788999966 389999999977533
Q ss_pred CcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHHHHhhhhh
Q 001838 868 DQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNL 946 (1007)
Q Consensus 868 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~ 946 (1007)
..........+++.|+|||......++.++|||||||++|||++ |..||+.... ..+..++.......
T Consensus 163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--~~~~~~~~~~~~~~--------- 231 (279)
T cd05109 163 ETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA--REIPDLLEKGERLP--------- 231 (279)
T ss_pred cceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHHCCCcCC---------
Confidence 22211222345678999999988889999999999999999998 8999875321 11222221110000
Q ss_pred ccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHhhh
Q 001838 947 LSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKIRDTLVK 998 (1007)
Q Consensus 947 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~~~~~~ 998 (1007)
.+...+.++.+++.+||+.||++||++.|+++.|+++....+.
T Consensus 232 ---------~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~~~ 274 (279)
T cd05109 232 ---------QPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDPSR 274 (279)
T ss_pred ---------CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCCcC
Confidence 0111244688999999999999999999999999888765543
No 117
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=3.6e-32 Score=294.42 Aligned_cols=242 Identities=25% Similarity=0.392 Sum_probs=191.2
Q ss_pred cccccccceecccCceEEEEEEEcCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEec
Q 001838 725 TDRFSKNNLLGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYM 804 (1007)
Q Consensus 725 ~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~ 804 (1007)
.++|+..+.||+|+||.||+|...+++.||||.++.... ..+++.+|+.++++++||||+++++++...+..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTM-DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELM 83 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcc-cHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecc
Confidence 356888999999999999999987788999999875432 2466889999999999999999999999999999999999
Q ss_pred CCCChhHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCccc
Q 001838 805 PNGSLENRLYSGT-CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLS 871 (1007)
Q Consensus 805 ~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~ 871 (1007)
++|+|.+++.... ..+++..+..++.|++.|+.|| |+.+|+|+|++ ||+|||+++........
T Consensus 84 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~- 159 (261)
T cd05068 84 KYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYL---EAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYE- 159 (261)
T ss_pred cCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCccc-
Confidence 9999999997643 4589999999999999999999 56789999663 89999999987532111
Q ss_pred ccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccch
Q 001838 872 MQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGE 950 (1007)
Q Consensus 872 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~ 950 (1007)
......++..|+|||+.....++.++|||||||++|||+| |+.||...... .... .++.....
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~------------~~~~~~~~-- 223 (261)
T cd05068 160 AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA--EVLQ------------QVDQGYRM-- 223 (261)
T ss_pred ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH--HHHH------------HHHcCCCC--
Confidence 1112233468999999988889999999999999999999 99998753211 1111 11110000
Q ss_pred hhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 001838 951 ERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLK 991 (1007)
Q Consensus 951 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~ 991 (1007)
..+...+..+.+++.+|++.+|++||++.++.+.|++
T Consensus 224 ----~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 224 ----PCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred ----CCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 0011224568999999999999999999999999985
No 118
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=4.7e-32 Score=296.80 Aligned_cols=248 Identities=25% Similarity=0.365 Sum_probs=194.9
Q ss_pred cccccccceecccCceEEEEEEEcC-----CceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeEEEEEEec-CCee
Q 001838 725 TDRFSKNNLLGIGSFGSVYVARLQD-----GMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVKIISACSN-DDFK 797 (1007)
Q Consensus 725 ~~~~~~~~~ig~G~~g~Vy~~~~~~-----g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~~ 797 (1007)
.++|...+.||+|+||.||+|...+ +..||+|++.... ....+.+.+|+.++++++||||+++++++.. +...
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 84 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP 84 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence 4678889999999999999998765 6889999987542 3445778999999999999999999998776 4678
Q ss_pred EEEEEecCCCChhHhhhcCC-------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------cccee
Q 001838 798 ALIMEYMPNGSLENRLYSGT-------CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDF 858 (1007)
Q Consensus 798 ~lv~E~~~~gsL~~~l~~~~-------~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DF 858 (1007)
++++||+++|+|.+++.... ..+++..+..++.|++.||+|| |+.+++|+++. |++||
T Consensus 85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~L---H~~~i~H~di~p~nil~~~~~~~kl~d~ 161 (280)
T cd05043 85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYL---HKRGVIHKDIAARNCVIDEELQVKITDN 161 (280)
T ss_pred EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHH---HHCCEeecccCHhhEEEcCCCcEEECCC
Confidence 99999999999999986532 3588999999999999999999 57789999653 89999
Q ss_pred ecceecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCcc
Q 001838 859 SIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPIS 937 (1007)
Q Consensus 859 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~ 937 (1007)
|+++.+.............++..|+|||++....++.++|||||||++||+++ |+.||.... ...+..+.......
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~--~~~~~~~~~~~~~~- 238 (280)
T cd05043 162 ALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEID--PFEMAAYLKDGYRL- 238 (280)
T ss_pred CCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCC--HHHHHHHHHcCCCC-
Confidence 99987644332222223456778999999988889999999999999999999 999997532 11222222111000
Q ss_pred HHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHH
Q 001838 938 VMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKIRDT 995 (1007)
Q Consensus 938 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~~~ 995 (1007)
.....++.++.+++.+||+.+|++|||+.|+++.|+.+.+.
T Consensus 239 -----------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 239 -----------------AQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred -----------------CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence 00011234688999999999999999999999999988753
No 119
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=1.1e-32 Score=304.03 Aligned_cols=247 Identities=27% Similarity=0.437 Sum_probs=192.3
Q ss_pred hcccccccceecccCceEEEEEEEcC------CceEEEEEechh-hHHHHHHHHHHHHHHHhc-CCCceeEEEEEEecCC
Q 001838 724 ATDRFSKNNLLGIGSFGSVYVARLQD------GMEVAVKVFHQR-YERALKSFQDECEVMKRI-RHRNLVKIISACSNDD 795 (1007)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~Vy~~~~~~------g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~ 795 (1007)
..++|+..+.||+|+||.||+|.... ...||+|++... ..+...++.+|+++++++ +||||+++++++..++
T Consensus 10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 89 (293)
T cd05053 10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEG 89 (293)
T ss_pred CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCC
Confidence 34578888999999999999998642 367999998753 234456788999999999 7999999999999999
Q ss_pred eeEEEEEecCCCChhHhhhcC---------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc-------
Q 001838 796 FKALIMEYMPNGSLENRLYSG---------------TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------- 853 (1007)
Q Consensus 796 ~~~lv~E~~~~gsL~~~l~~~---------------~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------- 853 (1007)
..++||||+++|+|.+++... ...+++..+++++.|++.|++|| |+.+|+|++++
T Consensus 90 ~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~L---H~~~ivH~dlkp~Nil~~ 166 (293)
T cd05053 90 PLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFL---ASKKCIHRDLAARNVLVT 166 (293)
T ss_pred CeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHH---HHCCccccccceeeEEEc
Confidence 999999999999999998632 23588999999999999999999 57889999763
Q ss_pred -----ccceeecceecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHH
Q 001838 854 -----HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLS 927 (1007)
Q Consensus 854 -----kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~ 927 (1007)
|++|||+++...............++..|+|||++....++.++|||||||++|||++ |..||......+ ..
T Consensus 167 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~~ 244 (293)
T cd05053 167 EDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE--LF 244 (293)
T ss_pred CCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHH--HH
Confidence 8999999987654332222223345678999999888889999999999999999998 999987532111 11
Q ss_pred HHHHhhcCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHH
Q 001838 928 RWVNDLLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKIR 993 (1007)
Q Consensus 928 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~ 993 (1007)
+.+....... .+.....++.+++.+|+..+|++||||.|+++.|+++.
T Consensus 245 ------------~~~~~~~~~~------~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 245 ------------KLLKEGYRME------KPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred ------------HHHHcCCcCC------CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 1111000000 01112346889999999999999999999999999874
No 120
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.5e-32 Score=309.10 Aligned_cols=252 Identities=19% Similarity=0.198 Sum_probs=186.1
Q ss_pred cccccccceecccCceEEEEEEEc-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEe
Q 001838 725 TDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEY 803 (1007)
Q Consensus 725 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~ 803 (1007)
..+|+..+.||+|+||.||+|... +++.||+|+... +.+.+|++++++++|||||+++++|...+..++||||
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~ 164 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR 164 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence 357999999999999999999865 689999997542 3467899999999999999999999999999999999
Q ss_pred cCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCccc
Q 001838 804 MPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLS 871 (1007)
Q Consensus 804 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~ 871 (1007)
+. ++|.+++.... .+++..+..++.|++.||+|| |+.+|+|||++ ||+|||+|+....... .
T Consensus 165 ~~-~~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~yl---H~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~-~ 238 (391)
T PHA03212 165 YK-TDLYCYLAAKR-NIAICDILAIERSVLRAIQYL---HENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINA-N 238 (391)
T ss_pred CC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCChHhEEEcCCCCEEEEeCCcccccccccc-c
Confidence 95 68988886543 478999999999999999999 56799999874 8999999976432211 1
Q ss_pred ccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCcccc------CcchHHHHHHhhc------CccHH
Q 001838 872 MQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFI------GELSLSRWVNDLL------PISVM 939 (1007)
Q Consensus 872 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~------~~~~l~~~~~~~~------~~~~~ 939 (1007)
......||+.|+|||++....++.++|||||||++|||+||+.|+..... ....+...+.... +....
T Consensus 239 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~ 318 (391)
T PHA03212 239 KYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQ 318 (391)
T ss_pred ccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchh
Confidence 22345799999999999988999999999999999999999988653211 0111111111111 00000
Q ss_pred HHhhhhh-------c-c-chhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 940 EVIDTNL-------L-S-GEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 940 ~~~d~~~-------~-~-~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
..++... . . ............+.++.+++.+||+.||++|||+.|+++.
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~h 376 (391)
T PHA03212 319 ANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDF 376 (391)
T ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 1111000 0 0 0000111112335578999999999999999999999864
No 121
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=5.2e-33 Score=311.81 Aligned_cols=241 Identities=22% Similarity=0.315 Sum_probs=188.5
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIM 801 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 801 (1007)
++|...+.||+|+||+||+|+.. +|+.||||+++... ....+.+.+|+.+++.++||||+++++++.+.+..|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 46888999999999999999865 68999999998653 234567889999999999999999999999999999999
Q ss_pred EecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCc
Q 001838 802 EYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQ 869 (1007)
Q Consensus 802 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~ 869 (1007)
||+++|+|.+++.+....+++..+..++.|++.||+|| |+.+|+|||++ ||+|||+++.......
T Consensus 81 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~l---H~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~ 157 (330)
T cd05601 81 EYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSV---HQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKM 157 (330)
T ss_pred CCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH---HHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCc
Confidence 99999999999987655689999999999999999999 57899999764 8999999987653322
Q ss_pred ccccccccCCcccccccccc------cCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhh
Q 001838 870 LSMQTQTLATIGYMAPEYGV------QGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVID 943 (1007)
Q Consensus 870 ~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d 943 (1007)
. ......||+.|+|||++. ...++.++|||||||++|||++|+.||...... ..... +..
T Consensus 158 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~-----~~~~~--------i~~ 223 (330)
T cd05601 158 V-NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSA-----KTYNN--------IMN 223 (330)
T ss_pred e-eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHH-----HHHHH--------HHc
Confidence 1 223356899999999886 456789999999999999999999999753211 11111 000
Q ss_pred hhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 944 TNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 944 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
...... .+.......++.+++..|++ +|++|||+.+++++
T Consensus 224 ~~~~~~----~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 224 FQRFLK----FPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred CCCccC----CCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 000000 00001123468889999998 99999999999864
No 122
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=5.2e-32 Score=298.03 Aligned_cols=245 Identities=26% Similarity=0.368 Sum_probs=190.3
Q ss_pred cccccceecccCceEEEEEEEc------CCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEE
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQ------DGMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKAL 799 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 799 (1007)
+|...+.||+|+||+||+|+.. ....||+|.+.... ....+++.+|+.++++++||||++++++|...+..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 4677889999999999999853 23579999887543 3345678999999999999999999999999999999
Q ss_pred EEEecCCCChhHhhhcC-----------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc----
Q 001838 800 IMEYMPNGSLENRLYSG-----------------------TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV---- 852 (1007)
Q Consensus 800 v~E~~~~gsL~~~l~~~-----------------------~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~---- 852 (1007)
||||+++|+|.+++... ...+++..+..++.|++.|++|| |+.+|+|+++
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~L---H~~~ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYL---AEMKLVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHH---HHCCeehhhhhhhe
Confidence 99999999999988642 12478889999999999999999 4678999976
Q ss_pred --------cccceeecceecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCc
Q 001838 853 --------AHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGE 923 (1007)
Q Consensus 853 --------~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~ 923 (1007)
+||+|||+++...............++..|+|||++....++.++|||||||++|||+| |+.||......
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~- 236 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPE- 236 (290)
T ss_pred EEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHH-
Confidence 48999999987643322222233456778999999888889999999999999999999 99998753211
Q ss_pred chHHHHHHhhcCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHH
Q 001838 924 LSLSRWVNDLLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKIRD 994 (1007)
Q Consensus 924 ~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~~ 994 (1007)
.+..+.. ...... .+.....++.+++.+|++.+|++||+++|+++.|+++..
T Consensus 237 -~~~~~~~------------~~~~~~------~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 237 -RLFNLLK------------TGYRME------RPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred -HHHHHHh------------CCCCCC------CCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 1111111 100000 011223468899999999999999999999999998754
No 123
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=1.1e-32 Score=313.20 Aligned_cols=242 Identities=21% Similarity=0.286 Sum_probs=186.7
Q ss_pred hcccccccceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEE
Q 001838 724 ATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKAL 799 (1007)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 799 (1007)
..++|+..+.||+|+||+||+|+.. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+++..|+
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 3467999999999999999999876 58899999997532 2233557889999999999999999999999999999
Q ss_pred EEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCC
Q 001838 800 IMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQ 867 (1007)
Q Consensus 800 v~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~ 867 (1007)
|||||++|+|.+++.... ++...+..++.|++.||+|| |+.+|+|||++ ||+|||+++.....
T Consensus 121 v~Ey~~gg~L~~~l~~~~--l~~~~~~~~~~qi~~aL~~L---H~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~ 195 (370)
T cd05596 121 VMEYMPGGDLVNLMSNYD--IPEKWARFYTAEVVLALDAI---HSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDAN 195 (370)
T ss_pred EEcCCCCCcHHHHHHhcC--CCHHHHHHHHHHHHHHHHHH---HHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCC
Confidence 999999999999987643 67778888999999999999 56789999764 89999999876432
Q ss_pred CcccccccccCCcccccccccccC----CCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhh
Q 001838 868 DQLSMQTQTLATIGYMAPEYGVQG----RVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVID 943 (1007)
Q Consensus 868 ~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d 943 (1007)
.. .......||+.|+|||++... .++.++|||||||++|||++|+.||....... .+ ..+.+
T Consensus 196 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~----~~---------~~i~~ 261 (370)
T cd05596 196 GM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG----TY---------SKIMD 261 (370)
T ss_pred Cc-ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHH----HH---------HHHHc
Confidence 21 112345799999999988653 47899999999999999999999997532110 00 01110
Q ss_pred hhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCC--CCCHHHHHHH
Q 001838 944 TNLLSGEERYFAAKEQSLLSILNLATECTIESPGK--RINAREIVTG 988 (1007)
Q Consensus 944 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~--Rpt~~evl~~ 988 (1007)
... ....+.....+.++.+++.+|++.+|++ |||+.|++++
T Consensus 262 ~~~----~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 262 HKN----SLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred CCC----cCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 000 0000000012456889999999999988 9999999876
No 124
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=4.6e-32 Score=293.92 Aligned_cols=241 Identities=25% Similarity=0.400 Sum_probs=190.4
Q ss_pred cccccceecccCceEEEEEEEc-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecC
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMP 805 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~ 805 (1007)
+|...+.||+|+||.||+|... +++.||+|++.... ...+++.+|++++++++||||+++++++..++..++||||++
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (263)
T cd05052 7 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT 85 (263)
T ss_pred HeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCC
Confidence 4777899999999999999865 58899999987543 334678999999999999999999999999999999999999
Q ss_pred CCChhHhhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcccc
Q 001838 806 NGSLENRLYSG-TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSM 872 (1007)
Q Consensus 806 ~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~ 872 (1007)
+|+|.+++... ...+++..+..++.|+++||+|| |+.+++|++++ |++|||+++........ .
T Consensus 86 ~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~l---H~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~-~ 161 (263)
T cd05052 86 YGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-A 161 (263)
T ss_pred CCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHH---HhCCEeecccCcceEEEcCCCcEEeCCCccccccccceee-c
Confidence 99999999754 34589999999999999999999 57789999764 89999999876532211 1
Q ss_pred cccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchh
Q 001838 873 QTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEE 951 (1007)
Q Consensus 873 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~ 951 (1007)
.....++..|+|||++....++.++|||||||++|||++ |..||..... .++... +.......
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~-----~~~~~~---------~~~~~~~~-- 225 (263)
T cd05052 162 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYEL---------LEKGYRME-- 225 (263)
T ss_pred cCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHH---------HHCCCCCC--
Confidence 122334678999999988899999999999999999998 9999875321 111111 11100000
Q ss_pred hhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHH
Q 001838 952 RYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKI 992 (1007)
Q Consensus 952 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i 992 (1007)
.+...+.++.+++.+||+.+|++|||+.|++++|+++
T Consensus 226 ----~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 226 ----RPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred ----CCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 0111245689999999999999999999999999875
No 125
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-33 Score=304.13 Aligned_cols=233 Identities=25% Similarity=0.314 Sum_probs=188.3
Q ss_pred cccccceecccCceEEEEEEEc-CCceEEEEEechh---hHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEE
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQR---YERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIME 802 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E 802 (1007)
.|...+.||.|+||.||-|+.. +...||||++... ..+...++..||..|++++|||+|.+.|||..+...|||||
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence 4667788999999999999865 6788999999743 33455788999999999999999999999999999999999
Q ss_pred ecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcc
Q 001838 803 YMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQL 870 (1007)
Q Consensus 803 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~ 870 (1007)
||- |+-.+.+.-+..++....+..|..+.+.||+|| |+.+.||||++ |++|||.|....+.
T Consensus 107 YCl-GSAsDlleVhkKplqEvEIAAi~~gaL~gLaYL---HS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PA--- 179 (948)
T KOG0577|consen 107 YCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYL---HSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPA--- 179 (948)
T ss_pred HHh-ccHHHHHHHHhccchHHHHHHHHHHHHHHHHHH---HHhhHHhhhccccceEecCCCeeeeccccchhhcCch---
Confidence 996 588888876666788888899999999999999 67788999774 89999999876532
Q ss_pred cccccccCCcccccccccc---cCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhc
Q 001838 871 SMQTQTLATIGYMAPEYGV---QGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLL 947 (1007)
Q Consensus 871 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~ 947 (1007)
.+.+|||+|||||++. .+.|+-|+||||+||+..||..+++|+..+... ..+...+..- .+.+.
T Consensus 180 ---nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAM-SALYHIAQNe---------sPtLq 246 (948)
T KOG0577|consen 180 ---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-SALYHIAQNE---------SPTLQ 246 (948)
T ss_pred ---hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHH-HHHHHHHhcC---------CCCCC
Confidence 4578999999999875 478999999999999999999999998764210 1111111110 01111
Q ss_pred cchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 948 SGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 948 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
..+....+..++..|++.-|.+|||..+++++
T Consensus 247 ---------s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H 278 (948)
T KOG0577|consen 247 ---------SNEWSDYFRNFVDSCLQKIPQERPTSEELLKH 278 (948)
T ss_pred ---------CchhHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence 22446679999999999999999999998876
No 126
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=8.4e-33 Score=287.74 Aligned_cols=261 Identities=23% Similarity=0.267 Sum_probs=192.3
Q ss_pred cccccccceecccCceEEEEEEEc-CCceEEEEEechhhH--HHHHHHHHHHHHHHhcCCCc-eeEEEEEEecCC-----
Q 001838 725 TDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYE--RALKSFQDECEVMKRIRHRN-LVKIISACSNDD----- 795 (1007)
Q Consensus 725 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~n-iv~l~~~~~~~~----- 795 (1007)
...|...++||+|+||+||+|+.+ +|+.||+|++.-..+ .......+|+.++++++|+| ||.+++++...+
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 345777788999999999999855 699999999975533 23345689999999999999 999999998877
Q ss_pred -eeEEEEEecCCCChhHhhhcCC---CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceee
Q 001838 796 -FKALIMEYMPNGSLENRLYSGT---CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFS 859 (1007)
Q Consensus 796 -~~~lv~E~~~~gsL~~~l~~~~---~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFG 859 (1007)
..++||||++. +|.+++.... ..++...+..++.|+++||+|| |+++|+|||++ ||+|||
T Consensus 90 ~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~---H~~~IlHRDLKPQNlLi~~~G~lKlaDFG 165 (323)
T KOG0594|consen 90 GKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFL---HSHGILHRDLKPQNLLISSSGVLKLADFG 165 (323)
T ss_pred ceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHH---HhCCeecccCCcceEEECCCCcEeeeccc
Confidence 78999999976 9999998654 3577788999999999999999 78899999875 999999
Q ss_pred cceecCCCCcccccccccCCcccccccccccC-CCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhc-C--
Q 001838 860 IAKFLNGQDQLSMQTQTLATIGYMAPEYGVQG-RVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLL-P-- 935 (1007)
Q Consensus 860 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~-~-- 935 (1007)
+|+...-. ....+..++|.+|+|||++.+. .|+..+||||+|||++||+++++-|.+..+.+ .+.+..+... |
T Consensus 166 lAra~~ip--~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~-ql~~If~~lGtP~e 242 (323)
T KOG0594|consen 166 LARAFSIP--MRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEID-QLFRIFRLLGTPNE 242 (323)
T ss_pred hHHHhcCC--cccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHH-HHHHHHHHcCCCCc
Confidence 99965422 1224567899999999999886 69999999999999999999998887643311 1111111111 1
Q ss_pred ccH---HHHhhhh--hccch--hhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH--HHHH
Q 001838 936 ISV---MEVIDTN--LLSGE--ERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG--LLKI 992 (1007)
Q Consensus 936 ~~~---~~~~d~~--~~~~~--~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~--L~~i 992 (1007)
..+ ....+.. ..... .......+....+..+++.+|++++|.+|.|+++++++ +..+
T Consensus 243 ~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~ 308 (323)
T KOG0594|consen 243 KDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSEL 308 (323)
T ss_pred cCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccc
Confidence 000 0000100 00000 00000011111368999999999999999999999987 4444
No 127
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=2e-32 Score=302.03 Aligned_cols=249 Identities=24% Similarity=0.383 Sum_probs=187.0
Q ss_pred ccccccceecccCceEEEEEEEcC---------------CceEEEEEechh-hHHHHHHHHHHHHHHHhcCCCceeEEEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQD---------------GMEVAVKVFHQR-YERALKSFQDECEVMKRIRHRNLVKIIS 789 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~~---------------g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~ 789 (1007)
++|+..+.||+|+||.||+|+... ...||||+++.. .....+.|.+|++++++++||||+++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 578889999999999999987542 235899998754 2344567999999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCChhHhhhcCC-----------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc-----
Q 001838 790 ACSNDDFKALIMEYMPNGSLENRLYSGT-----------CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA----- 853 (1007)
Q Consensus 790 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~-----------~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~----- 853 (1007)
++...+..++||||+++++|.+++.... ..+++..+.+++.|++.|++|| |+.+++|++++
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~l---H~~~i~H~dlkp~Nil 161 (295)
T cd05097 85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYL---ASLNFVHRDLATRNCL 161 (295)
T ss_pred EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHH---HhcCeeccccChhhEE
Confidence 9999999999999999999999986431 2367889999999999999999 57789999763
Q ss_pred -------ccceeecceecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh--CCCCCCccccCcc
Q 001838 854 -------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT--GKKPTDEIFIGEL 924 (1007)
Q Consensus 854 -------kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt--G~~p~~~~~~~~~ 924 (1007)
|++|||+++...............++..|+|||+...+.++.++|||||||++|||++ |..||......+
T Consensus 162 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~- 240 (295)
T cd05097 162 VGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQ- 240 (295)
T ss_pred EcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHH-
Confidence 8999999987643322222233456788999999988889999999999999999998 566776432111
Q ss_pred hHHHHHHhhcCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 001838 925 SLSRWVNDLLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLL 990 (1007)
Q Consensus 925 ~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~ 990 (1007)
........... .+...... .++..+..+.+++.+|++.+|++||++.+|++.|+
T Consensus 241 -~~~~~~~~~~~-----~~~~~~~~------~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 241 -VIENTGEFFRN-----QGRQIYLS------QTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred -HHHHHHHhhhh-----ccccccCC------CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 11110000000 00000000 00112346999999999999999999999999886
No 128
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=6.5e-32 Score=293.65 Aligned_cols=245 Identities=27% Similarity=0.369 Sum_probs=190.3
Q ss_pred HHHhcccccccceecccCceEEEEEEEc-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEE
Q 001838 721 LLQATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKAL 799 (1007)
Q Consensus 721 ~~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 799 (1007)
++.+++.+.....||+|+||.||+|+.. ++..||+|.+........+.+.+|++++++++|+||+++++++..++..++
T Consensus 3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 82 (268)
T cd06624 3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKI 82 (268)
T ss_pred cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEE
Confidence 4456777777889999999999999865 578899999876655566789999999999999999999999999999999
Q ss_pred EEEecCCCChhHhhhcCCCCC--CHHHHHHHHHHHHHHHHHHHhcCCCCceeccc-------------cccceeecceec
Q 001838 800 IMEYMPNGSLENRLYSGTCML--DIFQRLNIMIDVALALEYLHFGHSTPIIHYMV-------------AHISDFSIAKFL 864 (1007)
Q Consensus 800 v~E~~~~gsL~~~l~~~~~~l--~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~-------------~kl~DFGla~~~ 864 (1007)
||||+++++|.+++......+ ++..+..++.|++.|++|| |+.+|+|+++ .||+|||++...
T Consensus 83 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~l---H~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~ 159 (268)
T cd06624 83 FMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYL---HDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRL 159 (268)
T ss_pred EEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHH---HHCCEeecCCCHHHEEEcCCCCeEEEecchhheec
Confidence 999999999999998654445 7788888999999999999 5789999865 379999999876
Q ss_pred CCCCcccccccccCCcccccccccccCC--CCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHh
Q 001838 865 NGQDQLSMQTQTLATIGYMAPEYGVQGR--VSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVI 942 (1007)
Q Consensus 865 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 942 (1007)
..... ......|+..|+|||++.... ++.++|||||||++|||++|+.||....... ...|......
T Consensus 160 ~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~--~~~~~~~~~~------- 228 (268)
T cd06624 160 AGINP--CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQ--AAMFKVGMFK------- 228 (268)
T ss_pred ccCCC--ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChh--hhHhhhhhhc-------
Confidence 43221 112345889999999986643 7899999999999999999999986421111 1111100000
Q ss_pred hhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 943 DTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 943 d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
. ....+.....++.+++.+||+.+|++|||+.|++++
T Consensus 229 ------~---~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 229 ------I---HPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred ------c---CCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 0 000011223468899999999999999999999864
No 129
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.2e-32 Score=302.16 Aligned_cols=248 Identities=27% Similarity=0.421 Sum_probs=192.4
Q ss_pred ccccccceecccCceEEEEEEEc--------CCceEEEEEechhh-HHHHHHHHHHHHHHHhc-CCCceeEEEEEEecCC
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ--------DGMEVAVKVFHQRY-ERALKSFQDECEVMKRI-RHRNLVKIISACSNDD 795 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~--------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~ 795 (1007)
++|...+.||+|+||.||+|+.. ++..||+|.++... ......+.+|+++++++ +||||++++++|...+
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 97 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 97 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence 57899999999999999999753 23569999997542 34456788999999999 7999999999999999
Q ss_pred eeEEEEEecCCCChhHhhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc-------
Q 001838 796 FKALIMEYMPNGSLENRLYSGT---------------CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------- 853 (1007)
Q Consensus 796 ~~~lv~E~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------- 853 (1007)
..|+||||+++|+|.+++.... ..+++.++.+++.|++.||+|| |+.+++|++++
T Consensus 98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~l---H~~gi~H~dlkp~Nill~ 174 (307)
T cd05098 98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVT 174 (307)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHH---HHCCcccccccHHheEEc
Confidence 9999999999999999997532 2478899999999999999999 56799999764
Q ss_pred -----ccceeecceecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHH
Q 001838 854 -----HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLS 927 (1007)
Q Consensus 854 -----kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~ 927 (1007)
|++|||.++...............++..|+|||++.+..++.++|||||||++|||++ |+.||..... .
T Consensus 175 ~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~-----~ 249 (307)
T cd05098 175 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV-----E 249 (307)
T ss_pred CCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH-----H
Confidence 8999999986643222111222335578999999988889999999999999999998 8888864211 1
Q ss_pred HHHHhhcCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHh
Q 001838 928 RWVNDLLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKIRDTL 996 (1007)
Q Consensus 928 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~~~~ 996 (1007)
+... .+..... ...+.....++.+++.+|++.+|++||||.||++.|+++.+..
T Consensus 250 ~~~~---------~~~~~~~------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~~ 303 (307)
T cd05098 250 ELFK---------LLKEGHR------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILALT 303 (307)
T ss_pred HHHH---------HHHcCCC------CCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHHh
Confidence 1111 1110000 0011122457889999999999999999999999999988763
No 130
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-33 Score=272.20 Aligned_cols=250 Identities=21% Similarity=0.277 Sum_probs=195.9
Q ss_pred cccccccceecccCceEEEEEE-EcCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCC-----eeE
Q 001838 725 TDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDD-----FKA 798 (1007)
Q Consensus 725 ~~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-----~~~ 798 (1007)
..+|.+.+.+|+|||+.||.++ ..+++.+|+|++.....+..+..++|++..++++||||++++++...+. ..|
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~y 99 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAY 99 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEE
Confidence 4689999999999999999998 5578999999998877777788999999999999999999999875433 589
Q ss_pred EEEEecCCCChhHhhhc---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeeccee
Q 001838 799 LIMEYMPNGSLENRLYS---GTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKF 863 (1007)
Q Consensus 799 lv~E~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~ 863 (1007)
++++|...|+|.+.+.. ++..+++.+.+.|+.+|++||++||. ..+++.|||++ ++.|||-+..
T Consensus 100 ll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~-~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~ 178 (302)
T KOG2345|consen 100 LLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHE-KEPPYAHRDIKPANILLSDSGLPVLMDLGSATQ 178 (302)
T ss_pred EEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhc-cCCcccccCCCcceeEecCCCceEEEeccCccc
Confidence 99999999999998864 34578999999999999999999975 34579999875 7999999886
Q ss_pred cCCCCc-------ccccccccCCccccccccccc---CCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhh
Q 001838 864 LNGQDQ-------LSMQTQTLATIGYMAPEYGVQ---GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDL 933 (1007)
Q Consensus 864 ~~~~~~-------~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~ 933 (1007)
..-.-. .+.......|..|+|||.+.- ...++++|||||||++|+|+.|..||+.....+.++.--+.
T Consensus 179 a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~-- 256 (302)
T KOG2345|consen 179 APIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQ-- 256 (302)
T ss_pred cceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeee--
Confidence 542111 111123457899999998754 34689999999999999999999999976543332211000
Q ss_pred cCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHH
Q 001838 934 LPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKI 992 (1007)
Q Consensus 934 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i 992 (1007)
...+.-... ...++.+.+++..|++.||.+||++.|++..++.+
T Consensus 257 ---------n~q~s~P~~------~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 257 ---------NAQISIPNS------SRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred ---------ccccccCCC------CCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 001100000 11355789999999999999999999999998764
No 131
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.3e-34 Score=306.53 Aligned_cols=239 Identities=23% Similarity=0.315 Sum_probs=194.9
Q ss_pred cccccceecccCceEEEEEEEcC-CceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecC
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMP 805 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~ 805 (1007)
.|.++..+|.|+||+||+|..++ +...|.|++....+...++|+-|++||....||+||++++.|..++..|+..|||.
T Consensus 33 ~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~ 112 (1187)
T KOG0579|consen 33 HWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCG 112 (1187)
T ss_pred HHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecC
Confidence 45556789999999999998764 66678899988888888999999999999999999999999999999999999999
Q ss_pred CCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCccccc
Q 001838 806 NGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQ 873 (1007)
Q Consensus 806 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~~ 873 (1007)
||..+..+-.-...+...++..+++|++.||.|| |+..|||||++ +++|||.+...... ....
T Consensus 113 GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~L---Hs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t--~qkR 187 (1187)
T KOG0579|consen 113 GGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWL---HSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKST--RQKR 187 (1187)
T ss_pred CchHhHHHHHhccccchHHHHHHHHHHHHHHHHH---hhcchhhhhccccceEEEecCcEeeecccccccchhH--Hhhh
Confidence 9999998877667799999999999999999999 78999999875 89999988654321 1223
Q ss_pred ccccCCcccccccccc-----cCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhcc
Q 001838 874 TQTLATIGYMAPEYGV-----QGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLS 948 (1007)
Q Consensus 874 ~~~~gt~~y~aPE~~~-----~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~ 948 (1007)
.+..|||+|||||+.. ..+|+.++|||||||+|.||.-+.+|..+... +.++-....
T Consensus 188 DsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnp-----------------MRVllKiaK- 249 (1187)
T KOG0579|consen 188 DSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNP-----------------MRVLLKIAK- 249 (1187)
T ss_pred ccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccch-----------------HHHHHHHhh-
Confidence 4678999999999864 46799999999999999999999999775321 112111111
Q ss_pred chhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 949 GEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 949 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
...+....+......+.+++.+||..+|..||++++++++
T Consensus 250 SePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 250 SEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred cCCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence 1112222344556789999999999999999999999875
No 132
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=5.4e-32 Score=323.48 Aligned_cols=252 Identities=22% Similarity=0.291 Sum_probs=192.2
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIM 801 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 801 (1007)
++|+..+.||+|+||+||+|+.. +|+.||||++.... ....++|.+|++++++++|||||++++++.+.+..|+||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 57899999999999999999876 58999999997432 334567999999999999999999999999999999999
Q ss_pred EecCCCChhHhhhcC----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceee
Q 001838 802 EYMPNGSLENRLYSG----------TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFS 859 (1007)
Q Consensus 802 E~~~~gsL~~~l~~~----------~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFG 859 (1007)
||++||+|.+++... ....++..+.+++.||++||+|| |+.+|+|||++ ||+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yL---Hs~GIIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYV---HSKGVLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHH---HHCCccccCCchheEEEcCCCCEEEEecC
Confidence 999999999988631 12356677889999999999999 56789999764 899999
Q ss_pred cceecCCCCc----------------ccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCc
Q 001838 860 IAKFLNGQDQ----------------LSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGE 923 (1007)
Q Consensus 860 la~~~~~~~~----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~ 923 (1007)
+++....... ........||+.|||||++.+..++.++|||||||++|||+||+.||.......
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k 238 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK 238 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence 9987621110 001122469999999999998899999999999999999999999997522111
Q ss_pred chHHHHHHhhcCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCC-CHHHHHHHHHHHHHHhhh
Q 001838 924 LSLSRWVNDLLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRI-NAREIVTGLLKIRDTLVK 998 (1007)
Q Consensus 924 ~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-t~~evl~~L~~i~~~~~~ 998 (1007)
..... .. .++.. .......+..+.+++.+|++.||++|| +++++.+.|+.......+
T Consensus 239 i~~~~---~i--------~~P~~-------~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~~p~ 296 (932)
T PRK13184 239 ISYRD---VI--------LSPIE-------VAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQGSPE 296 (932)
T ss_pred hhhhh---hc--------cChhh-------ccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcCcc
Confidence 10000 00 00000 000112244678999999999999996 677788888877654333
No 133
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=2.1e-32 Score=299.40 Aligned_cols=242 Identities=26% Similarity=0.420 Sum_probs=190.5
Q ss_pred ccccccceecccCceEEEEEEEc------CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ------DGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKAL 799 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 799 (1007)
.+|+..+.||+|+||.||+|... ++..||+|.+........+.+.+|++++++++||||+++++++.+.+..++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 35777899999999999999642 366899999887666666789999999999999999999999999999999
Q ss_pred EEEecCCCChhHhhhcCC--------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------c
Q 001838 800 IMEYMPNGSLENRLYSGT--------------CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------A 853 (1007)
Q Consensus 800 v~E~~~~gsL~~~l~~~~--------------~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~ 853 (1007)
||||+++|+|.+++.... ..+++..+..++.|++.|++|| |+.+++|+++ +
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~L---H~~~i~H~dlkp~nil~~~~~~~ 161 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYL---ASLHFVHRDLATRNCLVGQGLVV 161 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHH---HHCCeecccccHhhEEEcCCCCE
Confidence 999999999999997542 2478899999999999999999 5778999965 3
Q ss_pred ccceeecceecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHh
Q 001838 854 HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVND 932 (1007)
Q Consensus 854 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~ 932 (1007)
||+|||+++...............+++.|+|||++....++.++|||||||++|||++ |+.||......+ .....
T Consensus 162 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~~~~~-- 237 (280)
T cd05092 162 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTE--AIECI-- 237 (280)
T ss_pred EECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHH--HHHHH--
Confidence 8999999987643322222223346788999999988889999999999999999998 999986532111 11111
Q ss_pred hcCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 001838 933 LLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLL 990 (1007)
Q Consensus 933 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~ 990 (1007)
...... ..+...+..+.+++.+||+.||++||++.||.+.|+
T Consensus 238 ----------~~~~~~------~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 238 ----------TQGREL------ERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred ----------HcCccC------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 000000 000122346889999999999999999999999886
No 134
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=1.6e-32 Score=313.52 Aligned_cols=241 Identities=22% Similarity=0.276 Sum_probs=183.1
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIM 801 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 801 (1007)
++|...+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||++++++.+.+..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 46888999999999999999865 68999999986542 234567889999999999999999999999999999999
Q ss_pred EecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCc
Q 001838 802 EYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQ 869 (1007)
Q Consensus 802 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~ 869 (1007)
||+++|+|.+++.... .+++..+..++.|++.||+|| |+.+|+|||++ |++|||+++.......
T Consensus 81 E~~~gg~L~~~l~~~~-~~~~~~~~~~~~ql~~aL~~L---H~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 156 (377)
T cd05629 81 EFLPGGDLMTMLIKYD-TFSEDVTRFYMAECVLAIEAV---HKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHD 156 (377)
T ss_pred eCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCeeccCCCHHHEEECCCCCEEEeecccccccccccc
Confidence 9999999999997643 478888888999999999999 67899999874 8999999964321000
Q ss_pred c---------------------------------------------cccccccCCcccccccccccCCCCchhhHHHHHH
Q 001838 870 L---------------------------------------------SMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGI 904 (1007)
Q Consensus 870 ~---------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gv 904 (1007)
. ......+||+.|+|||++....++.++|||||||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGv 236 (377)
T cd05629 157 SAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGA 236 (377)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecch
Confidence 0 0001246999999999998889999999999999
Q ss_pred HHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCC---CC
Q 001838 905 MLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKR---IN 981 (1007)
Q Consensus 905 il~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R---pt 981 (1007)
++|||+||+.||......+. ....... .. .+... .......++.+++.+|+. +|.+| ++
T Consensus 237 il~elltG~~Pf~~~~~~~~-~~~i~~~--~~--------~~~~p------~~~~~s~~~~dli~~lL~-~~~~r~~r~~ 298 (377)
T cd05629 237 IMFECLIGWPPFCSENSHET-YRKIINW--RE--------TLYFP------DDIHLSVEAEDLIRRLIT-NAENRLGRGG 298 (377)
T ss_pred hhhhhhcCCCCCCCCCHHHH-HHHHHcc--CC--------ccCCC------CCCCCCHHHHHHHHHHhc-CHhhcCCCCC
Confidence 99999999999975321110 0000000 00 00000 000123467889999997 66664 69
Q ss_pred HHHHHHH
Q 001838 982 AREIVTG 988 (1007)
Q Consensus 982 ~~evl~~ 988 (1007)
+.|++++
T Consensus 299 ~~~~l~h 305 (377)
T cd05629 299 AHEIKSH 305 (377)
T ss_pred HHHHhcC
Confidence 9999886
No 135
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.98 E-value=3e-32 Score=296.09 Aligned_cols=242 Identities=23% Similarity=0.280 Sum_probs=186.7
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEec
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYM 804 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~ 804 (1007)
++|+..+.||+|+||.||+|+.. +|+.||+|++........+.+.+|+.++++++||||+++++++...+..++||||+
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~ 88 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYC 88 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCC
Confidence 46888999999999999999964 68899999997554444467889999999999999999999999999999999999
Q ss_pred CCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCcccc
Q 001838 805 PNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLSM 872 (1007)
Q Consensus 805 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~~~~ 872 (1007)
++|+|.+++.... .+++..+..++.|++.|++|| |+.+|+|+++ .||+|||+++....... .
T Consensus 89 ~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~--~ 162 (267)
T cd06646 89 GGGSLQDIYHVTG-PLSELQIAYVCRETLQGLAYL---HSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIA--K 162 (267)
T ss_pred CCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCccccCCCHHHEEECCCCCEEECcCccceeeccccc--c
Confidence 9999999987543 578899999999999999999 5678999865 38999999987642211 1
Q ss_pred cccccCCcccccccccc---cCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccc
Q 001838 873 QTQTLATIGYMAPEYGV---QGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSG 949 (1007)
Q Consensus 873 ~~~~~gt~~y~aPE~~~---~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~ 949 (1007)
.....|++.|+|||.+. ...++.++|||||||++|||++|+.||......+. ...+....... +..
T Consensus 163 ~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~-~~~~~~~~~~~-------~~~--- 231 (267)
T cd06646 163 RKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA-LFLMSKSNFQP-------PKL--- 231 (267)
T ss_pred cCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhh-heeeecCCCCC-------CCC---
Confidence 13346889999999874 34578899999999999999999999864321110 00000000000 000
Q ss_pred hhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 001838 950 EERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGL 989 (1007)
Q Consensus 950 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L 989 (1007)
......+.++.+++.+||+.+|++|||++++++.+
T Consensus 232 -----~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 232 -----KDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred -----ccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 00011234688999999999999999999998754
No 136
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.98 E-value=3.7e-32 Score=301.34 Aligned_cols=248 Identities=27% Similarity=0.413 Sum_probs=192.8
Q ss_pred cccccccceecccCceEEEEEEEc--------CCceEEEEEechhh-HHHHHHHHHHHHHHHhc-CCCceeEEEEEEecC
Q 001838 725 TDRFSKNNLLGIGSFGSVYVARLQ--------DGMEVAVKVFHQRY-ERALKSFQDECEVMKRI-RHRNLVKIISACSND 794 (1007)
Q Consensus 725 ~~~~~~~~~ig~G~~g~Vy~~~~~--------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~ 794 (1007)
.++|...+.||+|+||.||+|+.. ++..||+|.++... ....+.+.+|+.+++.+ +||||+++++++...
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 357888899999999999999742 24579999987542 34457789999999999 799999999999999
Q ss_pred CeeEEEEEecCCCChhHhhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------
Q 001838 795 DFKALIMEYMPNGSLENRLYSGT---------------CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------ 853 (1007)
Q Consensus 795 ~~~~lv~E~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------ 853 (1007)
+..|+||||+++|+|.+++.+.. ..+++..+.+++.|+++||+|| |+.+|+|+|++
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~L---H~~givH~dlkp~Nili 170 (304)
T cd05101 94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYL---ASQKCIHRDLAARNVLV 170 (304)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHH---HHCCeeecccccceEEE
Confidence 99999999999999999997531 2477888999999999999999 57799999764
Q ss_pred ------ccceeecceecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchH
Q 001838 854 ------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSL 926 (1007)
Q Consensus 854 ------kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l 926 (1007)
|++|||+++...............+++.|+|||++.+..++.++|||||||++|||++ |..||.... .
T Consensus 171 ~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-----~ 245 (304)
T cd05101 171 TENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP-----V 245 (304)
T ss_pred cCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC-----H
Confidence 8999999987754322222233456778999999988889999999999999999998 788886432 1
Q ss_pred HHHHHhhcCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHH
Q 001838 927 SRWVNDLLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKIRDT 995 (1007)
Q Consensus 927 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~~~ 995 (1007)
.++....... ... ..+..++.++.+++.+||+.+|++||||.|+++.|+++...
T Consensus 246 ~~~~~~~~~~---------~~~------~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 246 EELFKLLKEG---------HRM------DKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred HHHHHHHHcC---------CcC------CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 1111111000 000 00112345688999999999999999999999999988653
No 137
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.98 E-value=4.1e-32 Score=295.21 Aligned_cols=244 Identities=23% Similarity=0.427 Sum_probs=191.2
Q ss_pred ccccccceecccCceEEEEEEEc-CC---ceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DG---MEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALI 800 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 800 (1007)
++|+..+.||+|+||.||+|+.. ++ ..||+|.++... ....+.+..|++++++++||||+++.+++...+..++|
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMII 84 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEE
Confidence 46788899999999999999875 33 379999987542 34456789999999999999999999999999999999
Q ss_pred EEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCC
Q 001838 801 MEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQD 868 (1007)
Q Consensus 801 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~ 868 (1007)
|||+++|+|.+++......+++.++..++.|++.|++|| |+.+++|++++ |++|||++.......
T Consensus 85 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~l---H~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~ 161 (268)
T cd05063 85 TEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYL---SDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDP 161 (268)
T ss_pred EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeccccchhhEEEcCCCcEEECCCccceeccccc
Confidence 999999999999987666689999999999999999999 56789999764 899999998764322
Q ss_pred cccc-cccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHHHHhhhhh
Q 001838 869 QLSM-QTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNL 946 (1007)
Q Consensus 869 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~ 946 (1007)
.... ......+..|+|||++....++.++|||||||++|||++ |+.||...... ++... +....
T Consensus 162 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~-----~~~~~---------i~~~~ 227 (268)
T cd05063 162 EGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH-----EVMKA---------INDGF 227 (268)
T ss_pred ccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH-----HHHHH---------HhcCC
Confidence 2111 112234567999999988889999999999999999998 99998643211 11111 11000
Q ss_pred ccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHH
Q 001838 947 LSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKI 992 (1007)
Q Consensus 947 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i 992 (1007)
.. +.....+.++.+++.+|++.+|++||++.||++.|+++
T Consensus 228 ~~------~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 228 RL------PAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred CC------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 00 00112245689999999999999999999999999876
No 138
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.98 E-value=2.3e-32 Score=294.97 Aligned_cols=238 Identities=26% Similarity=0.411 Sum_probs=187.2
Q ss_pred cccccceecccCceEEEEEEEcCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecCC
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPN 806 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~ 806 (1007)
+|+..+.||+|+||.||+|..+++..+|+|++..... ....+.+|++++++++||||+++++++...+..++||||+++
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN 83 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence 4777899999999999999988778899999865322 235688899999999999999999999999999999999999
Q ss_pred CChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCcccccc
Q 001838 807 GSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLSMQT 874 (1007)
Q Consensus 807 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~~~~~~ 874 (1007)
++|.+++......+++..+..++.|++.|++|| |+.+++|+++ .|++|||+++........ ...
T Consensus 84 ~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~-~~~ 159 (256)
T cd05059 84 GCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYL---ESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYT-SSQ 159 (256)
T ss_pred CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---HHCCcccccccHhhEEECCCCcEEECCcccceeccccccc-ccC
Confidence 999999986555689999999999999999999 5678999965 389999999876432211 112
Q ss_pred cccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhh
Q 001838 875 QTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERY 953 (1007)
Q Consensus 875 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~ 953 (1007)
...++..|+|||++....++.++|||||||++|||++ |+.||...... .....+ .......
T Consensus 160 ~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~------------~~~~~~~---- 221 (256)
T cd05059 160 GTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNS--EVVESV------------SAGYRLY---- 221 (256)
T ss_pred CCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHH--HHHHHH------------HcCCcCC----
Confidence 2234567999999988899999999999999999999 89998753211 111111 0000000
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 001838 954 FAAKEQSLLSILNLATECTIESPGKRINAREIVTGL 989 (1007)
Q Consensus 954 ~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L 989 (1007)
.+...+.++.+++.+||..+|++|||+.|+++.|
T Consensus 222 --~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 222 --RPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred --CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 0011245689999999999999999999999886
No 139
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.98 E-value=3.6e-32 Score=314.97 Aligned_cols=253 Identities=22% Similarity=0.267 Sum_probs=182.0
Q ss_pred hcccccccceecccCceEEEEEEEc-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecC--------
Q 001838 724 ATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSND-------- 794 (1007)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-------- 794 (1007)
...+|...+.||+|+||+||+|... +++.||||++.... ....+|+.++++++|||||++++++...
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~ 139 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN 139 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence 3467999999999999999999875 58899999886432 2235799999999999999999887432
Q ss_pred CeeEEEEEecCCCChhHhhhc---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc-------------cccee
Q 001838 795 DFKALIMEYMPNGSLENRLYS---GTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA-------------HISDF 858 (1007)
Q Consensus 795 ~~~~lv~E~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~-------------kl~DF 858 (1007)
...++||||+++ ++.+++.. ....+++..+..++.|++.||+|| |+.+|+|||++ ||+||
T Consensus 140 ~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yL---H~~~IiHrDLKp~NILl~~~~~~vkL~DF 215 (440)
T PTZ00036 140 IFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYI---HSKFICHRDLKPQNLLIDPNTHTLKLCDF 215 (440)
T ss_pred eEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCEecCCcCHHHEEEcCCCCceeeecc
Confidence 246799999985 77776642 334688999999999999999999 57789999664 89999
Q ss_pred ecceecCCCCcccccccccCCcccccccccccC-CCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCcc
Q 001838 859 SIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQG-RVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPIS 937 (1007)
Q Consensus 859 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~ 937 (1007)
|+|+....... .....||+.|+|||++.+. .|+.++|||||||++|||++|++||.+.... ..+.+.+.......
T Consensus 216 Gla~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~-~~~~~i~~~~~~p~ 291 (440)
T PTZ00036 216 GSAKNLLAGQR---SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSV-DQLVRIIQVLGTPT 291 (440)
T ss_pred ccchhccCCCC---cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCC
Confidence 99987643322 1345689999999988664 6899999999999999999999999753221 11111111111111
Q ss_pred H--HHHhhhhhc-------cchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 938 V--MEVIDTNLL-------SGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 938 ~--~~~~d~~~~-------~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
. .....+... .........+...+.++.+++.+||+.||++|||+.|++++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h 351 (440)
T PTZ00036 292 EDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD 351 (440)
T ss_pred HHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence 0 000111000 00000011112234578999999999999999999999966
No 140
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.98 E-value=5.4e-32 Score=302.53 Aligned_cols=233 Identities=20% Similarity=0.312 Sum_probs=180.0
Q ss_pred ccccceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHH---HhcCCCceeEEEEEEecCCeeEEE
Q 001838 728 FSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVM---KRIRHRNLVKIISACSNDDFKALI 800 (1007)
Q Consensus 728 ~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l---~~l~H~niv~l~~~~~~~~~~~lv 800 (1007)
|+..+.||+|+||+||+|... +|+.||||+++... ....+.+.+|++++ ++++||||+++++++.+.+..|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 566789999999999999865 68999999997543 22345666776665 566799999999999999999999
Q ss_pred EEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCC
Q 001838 801 MEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQD 868 (1007)
Q Consensus 801 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~ 868 (1007)
|||+++|+|..++.++ .+++..+..++.|++.||+|| |+.+|+|||++ ||+|||+++......
T Consensus 81 ~E~~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~al~~l---H~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~ 155 (324)
T cd05589 81 MEYAAGGDLMMHIHTD--VFSEPRAVFYAACVVLGLQYL---HENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFG 155 (324)
T ss_pred EcCCCCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHHHH---HhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCC
Confidence 9999999999888654 489999999999999999999 57899999764 899999987543221
Q ss_pred cccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhcc
Q 001838 869 QLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLS 948 (1007)
Q Consensus 869 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~ 948 (1007)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||...... +.... .......
T Consensus 156 --~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~-----~~~~~--------i~~~~~~- 219 (324)
T cd05589 156 --DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEE-----EVFDS--------IVNDEVR- 219 (324)
T ss_pred --CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHH-----HHHHH--------HHhCCCC-
Confidence 1223457999999999998889999999999999999999999999753211 11110 0000000
Q ss_pred chhhhHHHHHHHHHHHHHHHhhcCCCCCCCCC-----CHHHHHHH
Q 001838 949 GEERYFAAKEQSLLSILNLATECTIESPGKRI-----NAREIVTG 988 (1007)
Q Consensus 949 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~evl~~ 988 (1007)
.+.....++.+++.+||+.||++|| ++.|+++.
T Consensus 220 -------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~ 257 (324)
T cd05589 220 -------YPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQ 257 (324)
T ss_pred -------CCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhC
Confidence 0011234678999999999999999 46666553
No 141
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.98 E-value=4.6e-32 Score=299.53 Aligned_cols=250 Identities=26% Similarity=0.389 Sum_probs=190.8
Q ss_pred cccccccceecccCceEEEEEEEcC-----------------CceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeE
Q 001838 725 TDRFSKNNLLGIGSFGSVYVARLQD-----------------GMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVK 786 (1007)
Q Consensus 725 ~~~~~~~~~ig~G~~g~Vy~~~~~~-----------------g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~ 786 (1007)
.++|+..+.||+|+||.||+|+..+ +..||+|++.... ....+.+.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 3578899999999999999997542 2468999987543 345578999999999999999999
Q ss_pred EEEEEecCCeeEEEEEecCCCChhHhhhcCC----------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc---
Q 001838 787 IISACSNDDFKALIMEYMPNGSLENRLYSGT----------CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA--- 853 (1007)
Q Consensus 787 l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~----------~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~--- 853 (1007)
++++|..++..++||||+++++|.+++.+.. ..+++..+..++.|++.||+|| |+.+|+|+|++
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~L---H~~~i~H~dlkp~N 160 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYL---ESLNFVHRDLATRN 160 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHH---HHcCccccccchhc
Confidence 9999999999999999999999999997543 2588999999999999999999 56789999764
Q ss_pred ---------ccceeecceecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh--CCCCCCccccC
Q 001838 854 ---------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT--GKKPTDEIFIG 922 (1007)
Q Consensus 854 ---------kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt--G~~p~~~~~~~ 922 (1007)
+++|||+++...............+++.|+|||++....++.++|||||||++|||++ |..||......
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~ 240 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQ 240 (296)
T ss_pred eeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChH
Confidence 7999999987644332222334457789999999988889999999999999999998 67787643211
Q ss_pred cchHHHHHHhhcCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 001838 923 ELSLSRWVNDLLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLL 990 (1007)
Q Consensus 923 ~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~ 990 (1007)
.....+....... +... ....+...+.++.+++.+|++.||++|||+.||++.|+
T Consensus 241 --~~~~~~~~~~~~~-----~~~~------~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 241 --QVIENAGHFFRDD-----GRQI------YLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred --HHHHHHHhccccc-----cccc------cCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 1111111100000 0000 00001122357899999999999999999999999886
No 142
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.98 E-value=6.9e-32 Score=294.10 Aligned_cols=227 Identities=23% Similarity=0.368 Sum_probs=177.2
Q ss_pred eecccCceEEEEEEEcC-------------------------CceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEE
Q 001838 733 LLGIGSFGSVYVARLQD-------------------------GMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKI 787 (1007)
Q Consensus 733 ~ig~G~~g~Vy~~~~~~-------------------------g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l 787 (1007)
.||+|+||.||+|.... ...||+|++.........+|.+|+.++++++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 58999999999997421 13589999986655555778999999999999999999
Q ss_pred EEEEecCCeeEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc--------------
Q 001838 788 ISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA-------------- 853 (1007)
Q Consensus 788 ~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~-------------- 853 (1007)
+++|.+....++||||+++|+|..++.+....+++..+.+++.|+++||+|| |+.+|+|||++
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~iiH~dlkp~Nill~~~~~~~~ 158 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYL---EDKNLVHGNVCAKNILLARLGLAEG 158 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HcCCccCCCCCcccEEEeccCcccC
Confidence 9999999999999999999999999976656689999999999999999999 57799998653
Q ss_pred -----ccceeecceecCCCCcccccccccCCccccccccccc-CCCCchhhHHHHHHHHHHH-HhCCCCCCccccCcchH
Q 001838 854 -----HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQ-GRVSTRGDVYSYGIMLMET-FTGKKPTDEIFIGELSL 926 (1007)
Q Consensus 854 -----kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvil~el-ltG~~p~~~~~~~~~~l 926 (1007)
|++|||++...... ....++..|+|||++.. ..++.++|||||||++||| ++|+.||......+ .
T Consensus 159 ~~~~~kl~d~g~~~~~~~~------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~--~ 230 (274)
T cd05076 159 TSPFIKLSDPGVSFTALSR------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE--K 230 (274)
T ss_pred ccceeeecCCccccccccc------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH--H
Confidence 67899987644221 12357788999998865 5689999999999999998 47999987532211 1
Q ss_pred HHHHHhhcCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 001838 927 SRWVNDLLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLL 990 (1007)
Q Consensus 927 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~ 990 (1007)
..+. +...... +....++.+++.+||+.+|++||||.||++.|.
T Consensus 231 ~~~~------------~~~~~~~--------~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 231 ERFY------------EKKHRLP--------EPSCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred HHHH------------HhccCCC--------CCCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 1111 1000000 001235889999999999999999999999873
No 143
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.98 E-value=4.5e-32 Score=302.89 Aligned_cols=230 Identities=23% Similarity=0.318 Sum_probs=180.6
Q ss_pred ceecccCceEEEEEEEc----CCceEEEEEechhh----HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEe
Q 001838 732 NLLGIGSFGSVYVARLQ----DGMEVAVKVFHQRY----ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEY 803 (1007)
Q Consensus 732 ~~ig~G~~g~Vy~~~~~----~g~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~ 803 (1007)
+.||+|+||+||+++.. +++.||||+++... ......+.+|++++++++||||++++++|..++..|+||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 67999999999999853 57899999997542 22345678899999999999999999999999999999999
Q ss_pred cCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCccc
Q 001838 804 MPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLS 871 (1007)
Q Consensus 804 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~ 871 (1007)
+++|+|.+++.+.. .+.+..+..++.|++.||+|| |+.+|+|||++ ||+|||+++.......
T Consensus 82 ~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-- 155 (323)
T cd05584 82 LSGGELFMHLEREG-IFMEDTACFYLSEISLALEHL---HQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGT-- 155 (323)
T ss_pred CCCchHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCC--
Confidence 99999999997654 467778888999999999999 57789999764 8999999986432221
Q ss_pred ccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchh
Q 001838 872 MQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEE 951 (1007)
Q Consensus 872 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~ 951 (1007)
......||+.|+|||++....++.++|||||||++|||++|+.||...... ..... .......
T Consensus 156 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~-----~~~~~--------~~~~~~~---- 218 (323)
T cd05584 156 VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRK-----KTIDK--------ILKGKLN---- 218 (323)
T ss_pred cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHH-----HHHHH--------HHcCCCC----
Confidence 123457999999999998888999999999999999999999999753211 11111 1100000
Q ss_pred hhHHHHHHHHHHHHHHHhhcCCCCCCCCC-----CHHHHHHH
Q 001838 952 RYFAAKEQSLLSILNLATECTIESPGKRI-----NAREIVTG 988 (1007)
Q Consensus 952 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~evl~~ 988 (1007)
.+.....++.+++.+|++.+|++|| ++.++++.
T Consensus 219 ----~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h 256 (323)
T cd05584 219 ----LPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH 256 (323)
T ss_pred ----CCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence 0111234688999999999999999 78887764
No 144
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.98 E-value=4.4e-32 Score=305.51 Aligned_cols=248 Identities=25% Similarity=0.372 Sum_probs=189.0
Q ss_pred cccccccceecccCceEEEEEEE------cCCceEEEEEechhh-HHHHHHHHHHHHHHHhc-CCCceeEEEEEEecC-C
Q 001838 725 TDRFSKNNLLGIGSFGSVYVARL------QDGMEVAVKVFHQRY-ERALKSFQDECEVMKRI-RHRNLVKIISACSND-D 795 (1007)
Q Consensus 725 ~~~~~~~~~ig~G~~g~Vy~~~~------~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~-~ 795 (1007)
.++|+..+.||+|+||+||+|.. .+++.||||+++... ....+.+.+|++++.++ +|||||+++++|... .
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 85 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence 35789999999999999999973 247899999997532 33456788999999999 689999999988654 4
Q ss_pred eeEEEEEecCCCChhHhhhcCC----------------------------------------------------------
Q 001838 796 FKALIMEYMPNGSLENRLYSGT---------------------------------------------------------- 817 (1007)
Q Consensus 796 ~~~lv~E~~~~gsL~~~l~~~~---------------------------------------------------------- 817 (1007)
..++|||||++|+|.+++....
T Consensus 86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (343)
T cd05103 86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 165 (343)
T ss_pred ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence 6789999999999999986421
Q ss_pred --------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCccccccccc
Q 001838 818 --------CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTL 877 (1007)
Q Consensus 818 --------~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~~~~~~ 877 (1007)
..+++.++.+++.|+++||+|| |+.+|+||+++ |++|||+++...............
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~l---H~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 242 (343)
T cd05103 166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDAR 242 (343)
T ss_pred hhhhhhhhccCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCC
Confidence 1367888899999999999999 57899999764 899999998764332222222334
Q ss_pred CCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhhHHH
Q 001838 878 ATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYFAA 956 (1007)
Q Consensus 878 gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 956 (1007)
++..|+|||++....++.++|||||||++|||++ |..||........ .. ..+....... .
T Consensus 243 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~-~~------------~~~~~~~~~~------~ 303 (343)
T cd05103 243 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-FC------------RRLKEGTRMR------A 303 (343)
T ss_pred CCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHH-HH------------HHHhccCCCC------C
Confidence 6678999999988889999999999999999997 9999875321110 00 0000000000 0
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHH
Q 001838 957 KEQSLLSILNLATECTIESPGKRINAREIVTGLLKIRD 994 (1007)
Q Consensus 957 ~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~~ 994 (1007)
+.....++.+++..||+.+|++|||+.||+++|+.+.+
T Consensus 304 ~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 304 PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 00113468899999999999999999999999998765
No 145
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.98 E-value=7.3e-32 Score=295.02 Aligned_cols=233 Identities=20% Similarity=0.249 Sum_probs=180.6
Q ss_pred ecccCceEEEEEEEc-CCceEEEEEechhhH---HHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecCCCCh
Q 001838 734 LGIGSFGSVYVARLQ-DGMEVAVKVFHQRYE---RALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSL 809 (1007)
Q Consensus 734 ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~gsL 809 (1007)
||+|+||+||+|... +|+.||||++..... ...+.+..|++++++++||||+++.+++..++..|+|||||++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999865 689999999975432 2335678899999999999999999999999999999999999999
Q ss_pred hHhhhc---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcccccc
Q 001838 810 ENRLYS---GTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQT 874 (1007)
Q Consensus 810 ~~~l~~---~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~~~ 874 (1007)
.+++.. ....+++..+..++.|++.||+|| |+.+|+|||++ ||+|||+++....... ...
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~--~~~ 155 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHL---HQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS--KTK 155 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCc--ccc
Confidence 988753 234588999999999999999999 57799999763 8999999987643322 123
Q ss_pred cccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhhH
Q 001838 875 QTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYF 954 (1007)
Q Consensus 875 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 954 (1007)
...||+.|+|||++.+..++.++|||||||++|||++|+.||....... .......... ....
T Consensus 156 ~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~--------~~~~-------- 218 (280)
T cd05608 156 GYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-ENKELKQRIL--------NDSV-------- 218 (280)
T ss_pred ccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcch-hHHHHHHhhc--------ccCC--------
Confidence 4568999999999999999999999999999999999999997532111 0001110000 0000
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCC-----CHHHHHHH
Q 001838 955 AAKEQSLLSILNLATECTIESPGKRI-----NAREIVTG 988 (1007)
Q Consensus 955 ~~~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~evl~~ 988 (1007)
..++..+.++.+++.+|++.||++|| ++.|++++
T Consensus 219 ~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 219 TYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred CCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence 00112345688999999999999999 67777764
No 146
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.98 E-value=2.6e-32 Score=309.55 Aligned_cols=242 Identities=21% Similarity=0.281 Sum_probs=185.1
Q ss_pred hcccccccceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEE
Q 001838 724 ATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKAL 799 (1007)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 799 (1007)
..++|+..+.||+|+||.||+|+.. +++.||+|++.+.. ....+.+.+|+.+++.++||||+++++++.+++..|+
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l 120 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYM 120 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence 4568999999999999999999976 58899999997532 2234568899999999999999999999999999999
Q ss_pred EEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCC
Q 001838 800 IMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQ 867 (1007)
Q Consensus 800 v~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~ 867 (1007)
|||||++|+|.+++... .++...+..++.||+.||+|| |+.+|+|||++ ||+|||+|+.....
T Consensus 121 v~Ey~~gg~L~~~l~~~--~~~~~~~~~~~~qil~aL~~L---H~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~ 195 (370)
T cd05621 121 VMEYMPGGDLVNLMSNY--DVPEKWAKFYTAEVVLALDAI---HSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDET 195 (370)
T ss_pred EEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHH---HHCCeEecCCCHHHEEECCCCCEEEEecccceecccC
Confidence 99999999999999754 378888899999999999999 57899999774 89999999876432
Q ss_pred CcccccccccCCcccccccccccC----CCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhh
Q 001838 868 DQLSMQTQTLATIGYMAPEYGVQG----RVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVID 943 (1007)
Q Consensus 868 ~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d 943 (1007)
.. .......||+.|+|||++... .++.++||||+||++|||++|+.||......+ ... .+++
T Consensus 196 ~~-~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~-~~~------------~i~~ 261 (370)
T cd05621 196 GM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVG-TYS------------KIMD 261 (370)
T ss_pred Cc-eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHH-HHH------------HHHh
Confidence 21 122345799999999998654 37899999999999999999999997532110 011 1111
Q ss_pred hhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCC--CCCHHHHHHH
Q 001838 944 TNLLSGEERYFAAKEQSLLSILNLATECTIESPGK--RINAREIVTG 988 (1007)
Q Consensus 944 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~--Rpt~~evl~~ 988 (1007)
.... ...+........+.+++..|++.++.+ ||++.|++++
T Consensus 262 ~~~~----~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 262 HKNS----LNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred CCcc----cCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 0000 000000112345778888899865544 8999999887
No 147
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.98 E-value=3.8e-32 Score=295.65 Aligned_cols=243 Identities=23% Similarity=0.395 Sum_probs=190.4
Q ss_pred cccccceecccCceEEEEEEEcC-C---ceEEEEEechh-hHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEE
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQD-G---MEVAVKVFHQR-YERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIM 801 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~~-g---~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 801 (1007)
+|+..+.||+|+||.||+|.... + ..||||+++.. .....++|..|+.++++++||||+++++++.+++..++||
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 84 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT 84 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence 47788999999999999998653 3 36999998754 3445678999999999999999999999999999999999
Q ss_pred EecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCc
Q 001838 802 EYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQ 869 (1007)
Q Consensus 802 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~ 869 (1007)
||+++|+|.+++......+++.++..++.|++.|++|| |+.+++|++++ |++|||+++.......
T Consensus 85 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~l---H~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~ 161 (269)
T cd05065 85 EFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL---SEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS 161 (269)
T ss_pred ecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHH---HHCCEeecccChheEEEcCCCcEEECCCccccccccCcc
Confidence 99999999999987666689999999999999999999 56799998764 7999999987643222
Q ss_pred cccccc---ccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHHHHhhhh
Q 001838 870 LSMQTQ---TLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTN 945 (1007)
Q Consensus 870 ~~~~~~---~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~ 945 (1007)
...... ...+..|+|||++....++.++|||||||++||+++ |+.||..... .....++....+
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~--~~~~~~i~~~~~---------- 229 (269)
T cd05065 162 DPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN--QDVINAIEQDYR---------- 229 (269)
T ss_pred ccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCH--HHHHHHHHcCCc----------
Confidence 111111 112457999999988899999999999999999886 9999875321 112222211000
Q ss_pred hccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHH
Q 001838 946 LLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKI 992 (1007)
Q Consensus 946 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i 992 (1007)
.+.+...+..+.+++.+||+.+|++||++.+|+..|+++
T Consensus 230 --------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 230 --------LPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred --------CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 000112344688999999999999999999999998864
No 148
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.98 E-value=1.9e-31 Score=289.86 Aligned_cols=246 Identities=19% Similarity=0.301 Sum_probs=194.9
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechh---hHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQR---YERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIM 801 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 801 (1007)
++|+..+.||+|+||.||+|... +|+.||+|.++.. .....+.+.+|++++++++|+||+++++++.+.+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57899999999999999999977 7999999988642 2334578899999999999999999999999999999999
Q ss_pred EecCCCChhHhhhc---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCC
Q 001838 802 EYMPNGSLENRLYS---GTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNG 866 (1007)
Q Consensus 802 E~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~ 866 (1007)
||+++|+|.+++.. ....+++.++.+++.|++.|+.|| |+.+|+|+++. +++|||+++....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~l---h~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHM---HSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHH---HhCCEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 99999999998863 234578999999999999999999 57899999653 8999999987643
Q ss_pred CCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhh
Q 001838 867 QDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNL 946 (1007)
Q Consensus 867 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~ 946 (1007)
... ......|+..|+|||++.+..++.++|||||||++|||++|+.||.... ....++.... ....
T Consensus 159 ~~~--~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---~~~~~~~~~~---------~~~~ 224 (267)
T cd08224 159 KTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK---MNLYSLCKKI---------EKCD 224 (267)
T ss_pred CCc--ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCC---ccHHHHHhhh---------hcCC
Confidence 221 1123468889999999988889999999999999999999999986432 1122211111 0000
Q ss_pred ccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHH
Q 001838 947 LSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKIR 993 (1007)
Q Consensus 947 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~ 993 (1007)
... ...+.....+.+++.+||..+|++|||+.+|+++|++++
T Consensus 225 ~~~-----~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 225 YPP-----LPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred CCC-----CChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 000 001123456889999999999999999999999999875
No 149
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.98 E-value=1.3e-31 Score=292.11 Aligned_cols=242 Identities=25% Similarity=0.391 Sum_probs=187.1
Q ss_pred ccccceecccCceEEEEEEEcC----CceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCe-----
Q 001838 728 FSKNNLLGIGSFGSVYVARLQD----GMEVAVKVFHQRY--ERALKSFQDECEVMKRIRHRNLVKIISACSNDDF----- 796 (1007)
Q Consensus 728 ~~~~~~ig~G~~g~Vy~~~~~~----g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~----- 796 (1007)
|...+.||+|+||.||+|.... +..||||+++... ....+.+.+|++.+++++||||+++++++...+.
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 4567899999999999998642 3679999987432 3445689999999999999999999998876554
Q ss_pred -eEEEEEecCCCChhHhhhcC-----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------cccee
Q 001838 797 -KALIMEYMPNGSLENRLYSG-----TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDF 858 (1007)
Q Consensus 797 -~~lv~E~~~~gsL~~~l~~~-----~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DF 858 (1007)
.++||||+++|+|.+++... ...+++..+..++.|++.||+|| |+.+++|++++ ||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~l---H~~~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYL---SNRNFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHH---HhCCeeccccchheEEECCCCeEEECCc
Confidence 79999999999999988532 23578899999999999999999 56789999764 89999
Q ss_pred ecceecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCcc
Q 001838 859 SIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPIS 937 (1007)
Q Consensus 859 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~ 937 (1007)
|+++...............++..|+|||++....++.++|||||||++|||++ |..||.+.... ...++.....
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~--~~~~~~~~~~--- 232 (273)
T cd05035 158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH--EIYDYLRHGN--- 232 (273)
T ss_pred cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCC---
Confidence 99987654332222222345678999999988889999999999999999999 88998653211 1111111100
Q ss_pred HHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHH
Q 001838 938 VMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKI 992 (1007)
Q Consensus 938 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i 992 (1007)
.. ..+...+.++.+++.+||+.||++|||+.|+++.|+++
T Consensus 233 --------~~-------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 233 --------RL-------KQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred --------CC-------CCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 00 00112345789999999999999999999999999875
No 150
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.98 E-value=1.1e-32 Score=312.14 Aligned_cols=239 Identities=23% Similarity=0.350 Sum_probs=189.7
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIM 801 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 801 (1007)
++|...+.||+|+||+||+|+.. +|+.||||+++... ....+.+.+|+++++.++||||+++++++.+++..|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 46888999999999999999976 68999999997643 134567889999999999999999999999999999999
Q ss_pred EecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCC-
Q 001838 802 EYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQD- 868 (1007)
Q Consensus 802 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~- 868 (1007)
||+++|+|.+++.+. ..+++..+..++.|++.||+|| |+.+|+|||++ ||+|||+++......
T Consensus 81 e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~L---H~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~ 156 (350)
T cd05573 81 EYMPGGDLMNLLIRK-DVFPEETARFYIAELVLALDSV---HKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKD 156 (350)
T ss_pred cCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHH---HHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCc
Confidence 999999999999876 4588899999999999999999 56899999774 899999998764322
Q ss_pred --------------------------cccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccC
Q 001838 869 --------------------------QLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIG 922 (1007)
Q Consensus 869 --------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~ 922 (1007)
.........||+.|+|||++....++.++|||||||++|||++|+.||......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~ 236 (350)
T cd05573 157 REYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQ 236 (350)
T ss_pred ccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHH
Confidence 001123456999999999999999999999999999999999999999753211
Q ss_pred cchHHHHHHhhcCccHHHHhh--hhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCC-HHHHHHH
Q 001838 923 ELSLSRWVNDLLPISVMEVID--TNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRIN-AREIVTG 988 (1007)
Q Consensus 923 ~~~l~~~~~~~~~~~~~~~~d--~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt-~~evl~~ 988 (1007)
. .+. .+.. ........ .....++.+++.+|+. ||++||+ +.|++++
T Consensus 237 ~----~~~---------~i~~~~~~~~~p~~------~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 237 E----TYN---------KIINWKESLRFPPD------PPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred H----HHH---------HHhccCCcccCCCC------CCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 0 000 0000 00000000 0023468899999997 9999999 9999986
No 151
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.98 E-value=2.2e-32 Score=299.88 Aligned_cols=241 Identities=24% Similarity=0.378 Sum_probs=188.0
Q ss_pred cccccceecccCceEEEEEEEc------CCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEE
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQ------DGMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKAL 799 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 799 (1007)
+|...+.||+|+||+||+|+.. +++.||||+++... ....+.+.+|+.++++++|||||++++++.+.+..++
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~ 85 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM 85 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence 4667788999999999999863 25789999997543 3345678899999999999999999999999999999
Q ss_pred EEEecCCCChhHhhhcC---------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc-----------
Q 001838 800 IMEYMPNGSLENRLYSG---------------TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA----------- 853 (1007)
Q Consensus 800 v~E~~~~gsL~~~l~~~---------------~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~----------- 853 (1007)
++||+++++|.+++... ...+++..+.+++.|++.||+|+ |+.+|+|||++
T Consensus 86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~l---H~~gi~H~dlkp~Nil~~~~~~ 162 (283)
T cd05091 86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFL---SSHHVVHKDLATRNVLVFDKLN 162 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHH---HHcCccccccchhheEecCCCc
Confidence 99999999999998521 12478888999999999999999 57789999764
Q ss_pred -ccceeecceecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHH
Q 001838 854 -HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVN 931 (1007)
Q Consensus 854 -kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~ 931 (1007)
|++|||+++...............+++.|+|||++..+.++.++|||||||++|||++ |..||..... .++..
T Consensus 163 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-----~~~~~ 237 (283)
T cd05091 163 VKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN-----QDVIE 237 (283)
T ss_pred eEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHH
Confidence 8999999987643332222233456789999999988889999999999999999998 8888865321 11111
Q ss_pred hhcCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 001838 932 DLLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLL 990 (1007)
Q Consensus 932 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~ 990 (1007)
..... ... ..+..++..+.+++..||+.+|++||+++||++.|+
T Consensus 238 ~i~~~--------~~~-------~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~ 281 (283)
T cd05091 238 MIRNR--------QVL-------PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLR 281 (283)
T ss_pred HHHcC--------CcC-------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhh
Confidence 11100 000 001123456889999999999999999999999986
No 152
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.98 E-value=7.8e-32 Score=296.68 Aligned_cols=255 Identities=21% Similarity=0.252 Sum_probs=182.3
Q ss_pred ccccccceecccCceEEEEEEEc--CCceEEEEEechhh--HHHHHHHHHHHHHHHhc---CCCceeEEEEEEec-----
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ--DGMEVAVKVFHQRY--ERALKSFQDECEVMKRI---RHRNLVKIISACSN----- 793 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~--~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~H~niv~l~~~~~~----- 793 (1007)
++|...+.||+|+||+||+|+.. +|+.||||+++... ......+.+|+++++++ +||||++++++|..
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 36888999999999999999863 47889999986432 12234566788777766 69999999999852
Q ss_pred CCeeEEEEEecCCCChhHhhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeec
Q 001838 794 DDFKALIMEYMPNGSLENRLYSG-TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSI 860 (1007)
Q Consensus 794 ~~~~~lv~E~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGl 860 (1007)
....++||||++ |+|.+++... ...+++..+..++.|++.||+|| |+.+|+|||++ ||+|||+
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~l---H~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~ 156 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFL---HSHRVVHRDLKPQNILVTSSGQIKLADFGL 156 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeeCCCCHHHEEEcCCCCEEEccccc
Confidence 346899999997 6899988753 23588999999999999999999 57889999764 8999999
Q ss_pred ceecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhc---Ccc
Q 001838 861 AKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLL---PIS 937 (1007)
Q Consensus 861 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~---~~~ 937 (1007)
++..... .......||+.|+|||++....++.++|||||||++|||++|++||......+ .+...+.... +..
T Consensus 157 ~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~-~~~~i~~~~~~~~~~~ 232 (290)
T cd07862 157 ARIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-QLGKILDVIGLPGEED 232 (290)
T ss_pred eEeccCC---cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHH-HHHHHHHHhCCCChhh
Confidence 9876432 12234568999999999988889999999999999999999999997642211 1111111110 000
Q ss_pred HHHH--hhhhhcc--chhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 938 VMEV--IDTNLLS--GEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 938 ~~~~--~d~~~~~--~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
.... +...... ...............+.+++.+|++.||++|||+.|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h 287 (290)
T cd07862 233 WPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 287 (290)
T ss_pred chhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence 0000 0000000 0000000111234567899999999999999999999863
No 153
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.98 E-value=1.5e-31 Score=288.56 Aligned_cols=237 Identities=23% Similarity=0.326 Sum_probs=189.5
Q ss_pred cccccceecccCceEEEEEEEc-CCceEEEEEechh--hHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEe
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQR--YERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEY 803 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~ 803 (1007)
+|...+.||+|++|.||+|+.. +|+.||+|.+... .....+.+.+|++++++++||||+++++++.+.+..|+||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 4777889999999999999875 6899999998643 234557789999999999999999999999999999999999
Q ss_pred cCCCChhHhhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcc
Q 001838 804 MPNGSLENRLYSG-TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQL 870 (1007)
Q Consensus 804 ~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~ 870 (1007)
+++++|.+++... ...+++..+.+++.|++.|+.|| |+.+++|+++. |++|||+++........
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~l---H~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~ 157 (256)
T cd08529 81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHL---HSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNF 157 (256)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCcceEEEeCCCCEEEcccccceeccCccch
Confidence 9999999999764 34688999999999999999999 56799998663 89999999876543221
Q ss_pred cccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccch
Q 001838 871 SMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGE 950 (1007)
Q Consensus 871 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~ 950 (1007)
.....|++.|+|||+.....++.++|||||||++|||++|+.||..... ......+.. ... .
T Consensus 158 --~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~-----------~~~-~-- 219 (256)
T cd08529 158 --ANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQ--GALILKIIR-----------GVF-P-- 219 (256)
T ss_pred --hhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHc-----------CCC-C--
Confidence 2334688999999999988899999999999999999999999975321 111111100 000 0
Q ss_pred hhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 951 ERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 951 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
........++.+++.+||+.+|++||+|.|+++.
T Consensus 220 ----~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 220 ----PVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred ----CCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 0011224468999999999999999999999864
No 154
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.98 E-value=6.2e-32 Score=291.65 Aligned_cols=236 Identities=24% Similarity=0.400 Sum_probs=183.2
Q ss_pred eecccCceEEEEEEEc---CCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecCCCC
Q 001838 733 LLGIGSFGSVYVARLQ---DGMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGS 808 (1007)
Q Consensus 733 ~ig~G~~g~Vy~~~~~---~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~gs 808 (1007)
.||+|+||.||+|.+. ++..||||++.... ....+.+.+|+.++++++||||+++++++.. +..++||||+++|+
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCCCC
Confidence 3899999999999764 35679999997653 3345679999999999999999999998864 46899999999999
Q ss_pred hhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcc-ccccc
Q 001838 809 LENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQL-SMQTQ 875 (1007)
Q Consensus 809 L~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~-~~~~~ 875 (1007)
|.+++......+++..+.+++.|++.|++|| |+.+++|+|++ |++|||+++........ .....
T Consensus 81 L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 157 (257)
T cd05115 81 LNKFLSGKKDEITVSNVVELMHQVSMGMKYL---EGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSA 157 (257)
T ss_pred HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH---HhcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCC
Confidence 9999976556689999999999999999999 56789999763 89999999865433221 11122
Q ss_pred ccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhhH
Q 001838 876 TLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYF 954 (1007)
Q Consensus 876 ~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 954 (1007)
..++..|+|||++....++.++|||||||++||+++ |+.||...... .....+....+ .
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~~~------------------~ 217 (257)
T cd05115 158 GKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP--EVMSFIEQGKR------------------L 217 (257)
T ss_pred CCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH--HHHHHHHCCCC------------------C
Confidence 334678999999888889999999999999999996 99999754221 11111111100 0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHH
Q 001838 955 AAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKI 992 (1007)
Q Consensus 955 ~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i 992 (1007)
..+.....++.+++.+||+.+|++||++.+|.+.|+.+
T Consensus 218 ~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 218 DCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 00112245688999999999999999999999999865
No 155
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.98 E-value=6.9e-32 Score=290.18 Aligned_cols=235 Identities=29% Similarity=0.405 Sum_probs=185.6
Q ss_pred ceecccCceEEEEEEEcCCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecCCCChh
Q 001838 732 NLLGIGSFGSVYVARLQDGMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLE 810 (1007)
Q Consensus 732 ~~ig~G~~g~Vy~~~~~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~gsL~ 810 (1007)
++||+|+||.||+|...++..||+|+++... ......+.+|++++++++||||+++++++...+..++||||+++|+|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 3689999999999998889999999987543 334457899999999999999999999999999999999999999999
Q ss_pred HhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcccccccccC
Q 001838 811 NRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLA 878 (1007)
Q Consensus 811 ~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~~~~~~g 878 (1007)
+++......+++..+..++.|++.|+.|+ |+.+++|++++ |++|||++........ .......+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~-~~~~~~~~ 156 (250)
T cd05085 81 SFLRKKKDELKTKQLVKFALDAAAGMAYL---ESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIY-SSSGLKQI 156 (250)
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeecccChheEEEcCCCeEEECCCccceecccccc-ccCCCCCC
Confidence 99976655689999999999999999999 57899999764 8999999986532211 11122344
Q ss_pred CcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhhHHHH
Q 001838 879 TIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYFAAK 957 (1007)
Q Consensus 879 t~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 957 (1007)
+..|+|||++....++.++|||||||++||+++ |..||....... ....+.. ..... .+
T Consensus 157 ~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~--~~~~~~~------------~~~~~------~~ 216 (250)
T cd05085 157 PIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQ--AREQVEK------------GYRMS------CP 216 (250)
T ss_pred cccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHH--HHHHHHc------------CCCCC------CC
Confidence 678999999988889999999999999999998 999987532111 1111100 00000 00
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 001838 958 EQSLLSILNLATECTIESPGKRINAREIVTGLL 990 (1007)
Q Consensus 958 ~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~ 990 (1007)
...+.++.+++.+|++.+|++||++.|++++|.
T Consensus 217 ~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 217 QKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 112356899999999999999999999999875
No 156
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.98 E-value=3.4e-32 Score=302.66 Aligned_cols=229 Identities=21% Similarity=0.284 Sum_probs=177.0
Q ss_pred ceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhc-CCCceeEEEEEEecCCeeEEEEEecCC
Q 001838 732 NLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRI-RHRNLVKIISACSNDDFKALIMEYMPN 806 (1007)
Q Consensus 732 ~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~E~~~~ 806 (1007)
+.||+|+||+||+|+.. +++.||||+++... ....+.+..|..++... +||||+++++++...+..|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999875 58899999997643 23345566777777755 799999999999999999999999999
Q ss_pred CChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcccccc
Q 001838 807 GSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQT 874 (1007)
Q Consensus 807 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~~~ 874 (1007)
|+|.+++.... .+++..+..++.|++.||+|| |+.+|+|||++ ||+|||+++...... ....
T Consensus 81 g~L~~~~~~~~-~~~~~~~~~~~~qi~~al~~L---H~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~--~~~~ 154 (316)
T cd05592 81 GDLMFHIQSSG-RFDEARARFYAAEIICGLQFL---HKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE--GKAS 154 (316)
T ss_pred CcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC--Cccc
Confidence 99999987654 488888999999999999999 56899999764 899999998653222 1223
Q ss_pred cccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhhH
Q 001838 875 QTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYF 954 (1007)
Q Consensus 875 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 954 (1007)
...||+.|+|||++.+..++.++|||||||++|||++|+.||......+ .... +.... .
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~-----~~~~---------i~~~~---~---- 213 (316)
T cd05592 155 TFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDE-----LFDS---------ILNDR---P---- 213 (316)
T ss_pred cccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHH-----HHHH---------HHcCC---C----
Confidence 4579999999999988889999999999999999999999997532111 1100 00000 0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCHH-HHHH
Q 001838 955 AAKEQSLLSILNLATECTIESPGKRINAR-EIVT 987 (1007)
Q Consensus 955 ~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~-evl~ 987 (1007)
..+.....++.+++.+||+.||++||++. ++++
T Consensus 214 ~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05592 214 HFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQ 247 (316)
T ss_pred CCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence 00011234578999999999999999975 4543
No 157
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.98 E-value=3e-32 Score=305.02 Aligned_cols=236 Identities=18% Similarity=0.287 Sum_probs=181.8
Q ss_pred ceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhc-CCCceeEEEEEEecCCeeEEEEEecCC
Q 001838 732 NLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRI-RHRNLVKIISACSNDDFKALIMEYMPN 806 (1007)
Q Consensus 732 ~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~E~~~~ 806 (1007)
+.||+|+||+||+|+.. +++.||||+++... ....+.+.+|..++.++ +||||++++++|.+.+..|+|||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999875 58899999998643 23446688999999998 699999999999999999999999999
Q ss_pred CChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcccccc
Q 001838 807 GSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQT 874 (1007)
Q Consensus 807 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~~~ 874 (1007)
|+|.+++.+.. .+++..+..++.|++.||+|| |+.+|+|||++ ||+|||+++...... ....
T Consensus 81 g~L~~~~~~~~-~l~~~~~~~~~~qi~~~l~~l---H~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~--~~~~ 154 (329)
T cd05588 81 GDLMFHMQRQR-KLPEEHARFYSAEISLALNFL---HERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPG--DTTS 154 (329)
T ss_pred CCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeEecCCCHHHeEECCCCCEEECcCccccccccCC--Cccc
Confidence 99999887543 589999999999999999999 67899999764 899999998532211 1123
Q ss_pred cccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCc---chHHHHHHhhcCccHHHHhhhhhccchh
Q 001838 875 QTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGE---LSLSRWVNDLLPISVMEVIDTNLLSGEE 951 (1007)
Q Consensus 875 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~---~~l~~~~~~~~~~~~~~~~d~~~~~~~~ 951 (1007)
...||+.|+|||++.+..++.++|||||||++|||++|+.||+.....+ ....++.... .......
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~-------~~~~~~~---- 223 (329)
T cd05588 155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQV-------ILEKQIR---- 223 (329)
T ss_pred cccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHH-------HHcCCCC----
Confidence 4579999999999998899999999999999999999999997422111 1111111110 0000000
Q ss_pred hhHHHHHHHHHHHHHHHhhcCCCCCCCCCC------HHHHHHH
Q 001838 952 RYFAAKEQSLLSILNLATECTIESPGKRIN------AREIVTG 988 (1007)
Q Consensus 952 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt------~~evl~~ 988 (1007)
.+.....++.+++.+|++.||++||+ +.|++++
T Consensus 224 ----~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05588 224 ----IPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSH 262 (329)
T ss_pred ----CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcC
Confidence 01122346889999999999999998 5677654
No 158
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.98 E-value=5.6e-32 Score=293.92 Aligned_cols=244 Identities=23% Similarity=0.412 Sum_probs=191.5
Q ss_pred ccccccceecccCceEEEEEEEc----CCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ----DGMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALI 800 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~----~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 800 (1007)
++|+..+.||+|+||.||+|+.. .+..||+|.++... ....+.+.+|+.++++++||||+++++++..++..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 46888899999999999999864 23479999987542 34457889999999999999999999999999999999
Q ss_pred EEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCC
Q 001838 801 MEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQD 868 (1007)
Q Consensus 801 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~ 868 (1007)
|||+++|+|.+++.+....+++.++.+++.|++.|++|| |+.+++|++++ |++|||+++......
T Consensus 84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~l---H~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd05066 84 TEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 160 (267)
T ss_pred EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCEeehhhchhcEEECCCCeEEeCCCCccccccccc
Confidence 999999999999987666689999999999999999999 57889999663 799999998765332
Q ss_pred ccc-ccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHHHHhhhhh
Q 001838 869 QLS-MQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNL 946 (1007)
Q Consensus 869 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~ 946 (1007)
... ......++..|+|||++....++.++|||||||++||+++ |+.||...... ....++.....
T Consensus 161 ~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~--~~~~~~~~~~~----------- 227 (267)
T cd05066 161 EAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ--DVIKAIEEGYR----------- 227 (267)
T ss_pred ceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH--HHHHHHhCCCc-----------
Confidence 211 1122234568999999988889999999999999999886 99998753211 11111111000
Q ss_pred ccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHH
Q 001838 947 LSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKI 992 (1007)
Q Consensus 947 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i 992 (1007)
.+.....+..+.+++.+|++.+|++||+|.++++.|+++
T Consensus 228 -------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 228 -------LPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred -------CCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 000111234688999999999999999999999999875
No 159
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.98 E-value=4.2e-32 Score=298.51 Aligned_cols=244 Identities=27% Similarity=0.413 Sum_probs=189.9
Q ss_pred cccccccceecccCceEEEEEEEc------CCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCee
Q 001838 725 TDRFSKNNLLGIGSFGSVYVARLQ------DGMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFK 797 (1007)
Q Consensus 725 ~~~~~~~~~ig~G~~g~Vy~~~~~------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 797 (1007)
.++|+..+.||+|+||.||+|... ++..||+|++.... ....+.+.+|+.++++++||||+++++++.+++..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 467889999999999999999853 46789999987543 34456799999999999999999999999999999
Q ss_pred EEEEEecCCCChhHhhhcCC---------------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc---
Q 001838 798 ALIMEYMPNGSLENRLYSGT---------------------CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA--- 853 (1007)
Q Consensus 798 ~lv~E~~~~gsL~~~l~~~~---------------------~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~--- 853 (1007)
++||||+++|+|.+++.... ..+++..++.++.|++.||+|| |+.+++|+++.
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~l---H~~~i~H~dl~p~n 160 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYL---SERKFVHRDLATRN 160 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHH---HhCCeecccccHhh
Confidence 99999999999999996421 2467888999999999999999 56799999763
Q ss_pred ---------ccceeecceecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCc
Q 001838 854 ---------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGE 923 (1007)
Q Consensus 854 ---------kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~ 923 (1007)
|++|||+++...............++..|+|||++....++.++|||||||++|||++ |..||.+....
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~- 239 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHE- 239 (288)
T ss_pred eEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-
Confidence 8999999986543322222223345678999999988899999999999999999998 88888643211
Q ss_pred chHHHHHHhhcCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 001838 924 LSLSRWVNDLLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLK 991 (1007)
Q Consensus 924 ~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~ 991 (1007)
++..... +.... ..++..+.++.+++.+|++.+|++|||+.|+++.|++
T Consensus 240 ----~~~~~~~--------~~~~~-------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 240 ----EVIYYVR--------DGNVL-------SCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred ----HHHHHHh--------cCCCC-------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 1111110 00000 0011224568999999999999999999999999873
No 160
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.98 E-value=1.1e-31 Score=291.64 Aligned_cols=246 Identities=20% Similarity=0.298 Sum_probs=193.0
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechh---hHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQR---YERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIM 801 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 801 (1007)
++|+..+.||+|+||.||+|+.. +|+.||||.+... .....+++.+|+.++++++||||+++++++.+++..++||
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 46888899999999999999864 7999999988643 2334567899999999999999999999999999999999
Q ss_pred EecCCCChhHhhhc---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCC
Q 001838 802 EYMPNGSLENRLYS---GTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNG 866 (1007)
Q Consensus 802 E~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~ 866 (1007)
||+++++|.+++.. ....+++..+..++.|++.|+.|| |+.+++|++++ +++|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~L---H~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHM---HSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 99999999998863 234578999999999999999999 57899999764 8999999887643
Q ss_pred CCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhh
Q 001838 867 QDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNL 946 (1007)
Q Consensus 867 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~ 946 (1007)
... ......|+..|+|||++....++.++|||||||++|||++|..||.....+ ...+.... .....+..
T Consensus 159 ~~~--~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~-----~~~~~~~~ 228 (267)
T cd08229 159 KTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN---LYSLCKKI-----EQCDYPPL 228 (267)
T ss_pred CCc--ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccch---HHHHhhhh-----hcCCCCCC
Confidence 221 112346889999999998888999999999999999999999998643211 11111110 00000000
Q ss_pred ccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHH
Q 001838 947 LSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKIR 993 (1007)
Q Consensus 947 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~ 993 (1007)
.......++.+++.+||+.+|++||||.+|.+.++++.
T Consensus 229 ---------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 229 ---------PSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred ---------CcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 01123456889999999999999999999999998763
No 161
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.98 E-value=3.7e-32 Score=311.11 Aligned_cols=189 Identities=22% Similarity=0.339 Sum_probs=159.3
Q ss_pred cccccceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEE
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIME 802 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E 802 (1007)
.|...+.||+|+||+||+|+.. +++.||||++.... ....+.+.+|++++++++|||||+++++|.+++..|+|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 5888999999999999999865 58899999997643 2345678899999999999999999999999999999999
Q ss_pred ecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCC--
Q 001838 803 YMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQD-- 868 (1007)
Q Consensus 803 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~-- 868 (1007)
||++|+|.+++.+.. .++......++.||+.||+|| |+.+|+|||++ ||+|||+|+......
T Consensus 82 ~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~al~~l---H~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~ 157 (382)
T cd05625 82 YIPGGDMMSLLIRMG-IFPEDLARFYIAELTCAVESV---HKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS 157 (382)
T ss_pred CCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEECCCCCEEEeECCCCccccccccc
Confidence 999999999997653 478888888999999999999 57789999774 899999985321000
Q ss_pred -------------------------------------------cccccccccCCcccccccccccCCCCchhhHHHHHHH
Q 001838 869 -------------------------------------------QLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIM 905 (1007)
Q Consensus 869 -------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvi 905 (1007)
........+||+.|+|||++.+..++.++||||+||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvi 237 (382)
T cd05625 158 KYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 237 (382)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHH
Confidence 0000123469999999999998899999999999999
Q ss_pred HHHHHhCCCCCCcc
Q 001838 906 LMETFTGKKPTDEI 919 (1007)
Q Consensus 906 l~elltG~~p~~~~ 919 (1007)
+|||++|+.||...
T Consensus 238 l~elltG~~Pf~~~ 251 (382)
T cd05625 238 LYEMLVGQPPFLAQ 251 (382)
T ss_pred HHHHHhCCCCCCCC
Confidence 99999999999753
No 162
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.98 E-value=1.3e-31 Score=292.50 Aligned_cols=235 Identities=20% Similarity=0.262 Sum_probs=180.5
Q ss_pred ecccCceEEEEEEEc-CCceEEEEEechhhH---HHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecCCCCh
Q 001838 734 LGIGSFGSVYVARLQ-DGMEVAVKVFHQRYE---RALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSL 809 (1007)
Q Consensus 734 ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~gsL 809 (1007)
||+|+||+||+++.+ +|+.||+|++..... ...+.+..|++++++++||||+++++++.++...++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999865 589999999975321 2234566799999999999999999999999999999999999999
Q ss_pred hHhhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcccccccc
Q 001838 810 ENRLYSG-TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQT 876 (1007)
Q Consensus 810 ~~~l~~~-~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~~~~~ 876 (1007)
.+++... ...+++..+..++.|++.|++|| |+.+|+|++++ +|+|||++........ ....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~l---H~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~---~~~~ 154 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHL---HSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKT---ITQR 154 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHH---HHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCce---eecc
Confidence 9888653 33588999999999999999999 57899999764 8999999987643221 1335
Q ss_pred cCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhhHHH
Q 001838 877 LATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYFAA 956 (1007)
Q Consensus 877 ~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 956 (1007)
.|+..|+|||++....++.++||||+||++|||++|+.||...... .....+.... +.......
T Consensus 155 ~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~-~~~~~~~~~~--------~~~~~~~~------- 218 (277)
T cd05607 155 AGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEK-VAKEELKRRT--------LEDEVKFE------- 218 (277)
T ss_pred CCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcch-hhHHHHHHHh--------hccccccc-------
Confidence 6899999999998888999999999999999999999998753211 1111111110 00000000
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 001838 957 KEQSLLSILNLATECTIESPGKRINAREIVTGLL 990 (1007)
Q Consensus 957 ~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~ 990 (1007)
......++.+++.+||+.||++||+++|+++...
T Consensus 219 ~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~ 252 (277)
T cd05607 219 HQNFTEESKDICRLFLAKKPEDRLGSREKNDDPR 252 (277)
T ss_pred cccCCHHHHHHHHHHhccCHhhCCCCccchhhhh
Confidence 0112346899999999999999999988765443
No 163
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.98 E-value=1.1e-31 Score=298.49 Aligned_cols=229 Identities=21% Similarity=0.300 Sum_probs=178.2
Q ss_pred ceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhc-CCCceeEEEEEEecCCeeEEEEEecCC
Q 001838 732 NLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRI-RHRNLVKIISACSNDDFKALIMEYMPN 806 (1007)
Q Consensus 732 ~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~E~~~~ 806 (1007)
+.||+|+||+||+|+.. +++.||||+++... ....+.+..|..++... +||||+++++++.+.+..|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999976 57899999998653 23345667788888765 899999999999999999999999999
Q ss_pred CChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcccccc
Q 001838 807 GSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQT 874 (1007)
Q Consensus 807 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~~~ 874 (1007)
|+|.+++.... .+++..+..++.|++.||+|| |+.+|+|||++ ||+|||+++....... ...
T Consensus 81 g~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~L---H~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~ 154 (316)
T cd05619 81 GDLMFHIQSCH-KFDLPRATFYAAEIICGLQFL---HSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDA--KTC 154 (316)
T ss_pred CcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCC--cee
Confidence 99999997643 478889999999999999999 57899999764 8999999986432211 123
Q ss_pred cccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhhH
Q 001838 875 QTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYF 954 (1007)
Q Consensus 875 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 954 (1007)
...||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+.+.+... .+.
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~--~~~~~i~~~---------~~~--------- 214 (316)
T cd05619 155 TFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE--ELFQSIRMD---------NPC--------- 214 (316)
T ss_pred eecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhC---------CCC---------
Confidence 456999999999998889999999999999999999999999753211 111111000 000
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCHH-HHHH
Q 001838 955 AAKEQSLLSILNLATECTIESPGKRINAR-EIVT 987 (1007)
Q Consensus 955 ~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~-evl~ 987 (1007)
.+.....++.+++.+|++.||++||++. ++.+
T Consensus 215 -~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 215 -YPRWLTREAKDILVKLFVREPERRLGVKGDIRQ 247 (316)
T ss_pred -CCccCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence 0011234578999999999999999997 5544
No 164
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.98 E-value=1.3e-31 Score=295.47 Aligned_cols=238 Identities=24% Similarity=0.328 Sum_probs=188.6
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEec
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYM 804 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~ 804 (1007)
.+|...+.||+|+||.||+|... +++.||+|.+........+.+.+|+.++++++||||+++++++..+...|+||||+
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~ 99 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence 46888899999999999999864 68999999997654444577899999999999999999999999999999999999
Q ss_pred CCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcccc
Q 001838 805 PNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSM 872 (1007)
Q Consensus 805 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~ 872 (1007)
++|+|.+++... .+++.++..++.|++.|++|| |+.+|+|++++ ||+|||+++....... .
T Consensus 100 ~~~~L~~~~~~~--~~~~~~~~~i~~ql~~aL~~L---H~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~--~ 172 (296)
T cd06654 100 AGGSLTDVVTET--CMDEGQIAAVCRECLQALEFL---HSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS--K 172 (296)
T ss_pred CCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEEcCCCCEEECccccchhcccccc--c
Confidence 999999998654 378889999999999999999 57789999764 8999999886543221 1
Q ss_pred cccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhh
Q 001838 873 QTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEER 952 (1007)
Q Consensus 873 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~ 952 (1007)
.....|++.|+|||++....++.++|||||||++|||++|+.||........ +..+.....+ ..
T Consensus 173 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~-~~~~~~~~~~---------~~------ 236 (296)
T cd06654 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA-LYLIATNGTP---------EL------ 236 (296)
T ss_pred cCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHh-HHHHhcCCCC---------CC------
Confidence 1234688999999999888899999999999999999999999975322111 1111000000 00
Q ss_pred hHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 953 YFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 953 ~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
..+......+.+++.+||..+|++|||+.|+++.
T Consensus 237 --~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 237 --QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred --CCccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 0011223457899999999999999999999985
No 165
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.98 E-value=6.7e-32 Score=296.73 Aligned_cols=246 Identities=24% Similarity=0.348 Sum_probs=188.8
Q ss_pred hcccccccceecccCceEEEEEEEc------CCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCe
Q 001838 724 ATDRFSKNNLLGIGSFGSVYVARLQ------DGMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVKIISACSNDDF 796 (1007)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~Vy~~~~~------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 796 (1007)
..++|++.+.||+|+||.||+|..+ .+..||+|.++... ......+.+|+.++++++||||+++++++.+.+.
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP 83 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4578999999999999999999754 25589999986443 2334568899999999999999999999999999
Q ss_pred eEEEEEecCCCChhHhhhcCC---------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------cc
Q 001838 797 KALIMEYMPNGSLENRLYSGT---------CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HI 855 (1007)
Q Consensus 797 ~~lv~E~~~~gsL~~~l~~~~---------~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl 855 (1007)
.++||||+++|+|.+++.... ...++..+..++.|++.||.|| |+++|+|++++ |+
T Consensus 84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l---H~~~i~H~dikp~nili~~~~~~~L 160 (288)
T cd05061 84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYL---NAKKFVHRDLAARNCMVAHDFTVKI 160 (288)
T ss_pred cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHH---HhCCCcCCCCChheEEEcCCCcEEE
Confidence 999999999999999996421 2346678889999999999999 57899999764 79
Q ss_pred ceeecceecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhc
Q 001838 856 SDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLL 934 (1007)
Q Consensus 856 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~ 934 (1007)
+|||+++...............++..|+|||.+....++.++|||||||++|||++ |+.||...... ++....
T Consensus 161 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~-----~~~~~~- 234 (288)
T cd05061 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE-----QVLKFV- 234 (288)
T ss_pred CcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHH-
Confidence 99999987643322222223345778999999988889999999999999999999 78888653211 111110
Q ss_pred CccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHH
Q 001838 935 PISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKI 992 (1007)
Q Consensus 935 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i 992 (1007)
.+..... .+......+.+++.+|++.+|++|||+.|+++.+++.
T Consensus 235 -------~~~~~~~-------~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 235 -------MDGGYLD-------QPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278 (288)
T ss_pred -------HcCCCCC-------CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence 0000000 0011234689999999999999999999999888764
No 166
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.98 E-value=7.3e-32 Score=292.19 Aligned_cols=240 Identities=23% Similarity=0.373 Sum_probs=182.1
Q ss_pred ceecccCceEEEEEEEc----CCceEEEEEechh-hHHHHHHHHHHHHHHHhcCCCceeEEEEEEe-cCCeeEEEEEecC
Q 001838 732 NLLGIGSFGSVYVARLQ----DGMEVAVKVFHQR-YERALKSFQDECEVMKRIRHRNLVKIISACS-NDDFKALIMEYMP 805 (1007)
Q Consensus 732 ~~ig~G~~g~Vy~~~~~----~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~-~~~~~~lv~E~~~ 805 (1007)
+.||+|+||+||+|... ++..||||++... .....+.+.+|+.++++++||||+++++++. .++..++||||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 46899999999999854 2457999998643 2344578889999999999999999999876 4556899999999
Q ss_pred CCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcc--c
Q 001838 806 NGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQL--S 871 (1007)
Q Consensus 806 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~--~ 871 (1007)
+|+|.+++.+.....++..+..++.|++.|++|| |+.+++|++++ |++|||+++........ .
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 157 (262)
T cd05058 81 HGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYL---ASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVH 157 (262)
T ss_pred CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HhCCccccccCcceEEEcCCCcEEECCccccccccCCcceeec
Confidence 9999999987655577888899999999999999 56789999663 89999999865432111 1
Q ss_pred ccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhC-CCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccch
Q 001838 872 MQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTG-KKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGE 950 (1007)
Q Consensus 872 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG-~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~ 950 (1007)
......++..|+|||++....++.++|||||||++|||++| .+||.... ...+..++.... .
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~--~~~~~~~~~~~~-----------~---- 220 (262)
T cd05058 158 NHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVD--SFDITVYLLQGR-----------R---- 220 (262)
T ss_pred ccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCC--HHHHHHHHhcCC-----------C----
Confidence 11234567789999999888899999999999999999995 55665321 111111111000 0
Q ss_pred hhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHH
Q 001838 951 ERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKIRD 994 (1007)
Q Consensus 951 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~~ 994 (1007)
...+...+..+.+++.+||+.+|++||++.|++++|+++..
T Consensus 221 ---~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 221 ---LLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred ---CCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 00011123468899999999999999999999999998764
No 167
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.98 E-value=8.3e-32 Score=293.16 Aligned_cols=245 Identities=24% Similarity=0.380 Sum_probs=192.0
Q ss_pred ccccccceecccCceEEEEEEEcC----CceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQD----GMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALI 800 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~~----g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 800 (1007)
++|...+.||+|+||.||+|...+ ...||||+..... ....+.+.+|+.++++++||||+++++++.+ +..++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv 84 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV 84 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence 357788999999999999998643 3469999987554 4556789999999999999999999999875 457899
Q ss_pred EEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCC
Q 001838 801 MEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQD 868 (1007)
Q Consensus 801 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~ 868 (1007)
|||+++|+|.+++......+++..+..++.|++.|++|| |+.+++|++++ |++|||+++......
T Consensus 85 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l---H~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 161 (270)
T cd05056 85 MELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYL---ESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDES 161 (270)
T ss_pred EEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeccccChheEEEecCCCeEEccCceeeeccccc
Confidence 999999999999987655689999999999999999999 57789998763 899999998775432
Q ss_pred cccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhc
Q 001838 869 QLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLL 947 (1007)
Q Consensus 869 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~ 947 (1007)
... .+...++..|+|||++....++.++|||||||++||+++ |+.||......+ ...+..... ..
T Consensus 162 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~--~~~~~~~~~----------~~- 227 (270)
T cd05056 162 YYK-ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNND--VIGRIENGE----------RL- 227 (270)
T ss_pred cee-cCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHH--HHHHHHcCC----------cC-
Confidence 221 123345678999999888889999999999999999996 999997542211 111111000 00
Q ss_pred cchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHH
Q 001838 948 SGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKIRDT 995 (1007)
Q Consensus 948 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~~~ 995 (1007)
..++..+.++.+++.+|+..+|++|||+.|+++.|++++..
T Consensus 228 -------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 228 -------PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred -------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 00112245688999999999999999999999999998754
No 168
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.98 E-value=7.4e-32 Score=300.56 Aligned_cols=224 Identities=21% Similarity=0.285 Sum_probs=176.8
Q ss_pred ceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhc-CCCceeEEEEEEecCCeeEEEEEecCC
Q 001838 732 NLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRI-RHRNLVKIISACSNDDFKALIMEYMPN 806 (1007)
Q Consensus 732 ~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~E~~~~ 806 (1007)
+.||+|+||+||+|+.+ +++.||||+++... ....+.+..|.+++... +||||+++++++.+.+..|+|||||++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999876 58899999997542 23446678899999877 699999999999999999999999999
Q ss_pred CChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcccccc
Q 001838 807 GSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQT 874 (1007)
Q Consensus 807 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~~~ 874 (1007)
|+|.+++.... .+++..+..++.|++.||+|| |+.+|+|||++ ||+|||+++....... ...
T Consensus 81 g~L~~~i~~~~-~l~~~~~~~~~~ql~~~L~~l---H~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~--~~~ 154 (320)
T cd05590 81 GDLMFHIQKSR-RFDEARARFYAAEITSALMFL---HDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGK--TTS 154 (320)
T ss_pred chHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCC--ccc
Confidence 99999887654 488899999999999999999 57889999764 8999999986432211 123
Q ss_pred cccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhhH
Q 001838 875 QTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYF 954 (1007)
Q Consensus 875 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 954 (1007)
...||+.|+|||++.+..++.++|||||||++|||++|+.||...... ......... ...
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~-----~~~~~i~~~--------~~~------- 214 (320)
T cd05590 155 TFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENED-----DLFEAILND--------EVV------- 214 (320)
T ss_pred ccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH-----HHHHHHhcC--------CCC-------
Confidence 457999999999998888999999999999999999999999753211 111111000 000
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCH
Q 001838 955 AAKEQSLLSILNLATECTIESPGKRINA 982 (1007)
Q Consensus 955 ~~~~~~~~~~~~l~~~cl~~~p~~Rpt~ 982 (1007)
.+.....++.+++.+|++.||++||++
T Consensus 215 -~~~~~~~~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 215 -YPTWLSQDAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred -CCCCCCHHHHHHHHHHcccCHHHCCCC
Confidence 001123468899999999999999998
No 169
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.98 E-value=7.1e-32 Score=294.90 Aligned_cols=242 Identities=26% Similarity=0.377 Sum_probs=190.1
Q ss_pred ccccccceecccCceEEEEEEEcC------CceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQD------GMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKA 798 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~~------g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 798 (1007)
++|...+.||+|+||.||+|...+ +..||+|.+.... ......+.+|+.+++.++||||+++++++...+..+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~ 85 (277)
T cd05032 6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTL 85 (277)
T ss_pred HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcE
Confidence 578889999999999999998642 4689999987543 344567889999999999999999999999999999
Q ss_pred EEEEecCCCChhHhhhcCC---------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccce
Q 001838 799 LIMEYMPNGSLENRLYSGT---------CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISD 857 (1007)
Q Consensus 799 lv~E~~~~gsL~~~l~~~~---------~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~D 857 (1007)
+||||+++|+|.+++.... ..+++..+.+++.|++.|+.|| |+.+|+|+++ +||+|
T Consensus 86 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~di~p~nill~~~~~~kl~d 162 (277)
T cd05032 86 VVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYL---AAKKFVHRDLAARNCMVAEDLTVKIGD 162 (277)
T ss_pred EEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHH---HhCCccccccChheEEEcCCCCEEECC
Confidence 9999999999999996421 2367889999999999999999 5788999976 38999
Q ss_pred eecceecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCc
Q 001838 858 FSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPI 936 (1007)
Q Consensus 858 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~ 936 (1007)
||+++.+.............++..|+|||.+....++.++|||||||++||++| |+.||..... ....++...
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~--~~~~~~~~~---- 236 (277)
T cd05032 163 FGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN--EEVLKFVID---- 236 (277)
T ss_pred cccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCH--HHHHHHHhc----
Confidence 999987654332222234457889999999988889999999999999999998 9999864321 111111110
Q ss_pred cHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 001838 937 SVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLL 990 (1007)
Q Consensus 937 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~ 990 (1007)
.... ..+...+.++.+++.+||+.+|++|||+.|+++.|+
T Consensus 237 -------~~~~-------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 237 -------GGHL-------DLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred -------CCCC-------CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 0000 001112456899999999999999999999999886
No 170
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.98 E-value=6.1e-32 Score=292.43 Aligned_cols=240 Identities=25% Similarity=0.421 Sum_probs=187.6
Q ss_pred ccccccceecccCceEEEEEEEcCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecC
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMP 805 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~ 805 (1007)
++|+..+.||+|+||.||+|...++..||+|.++.... ..+.+.+|+.++++++||||+++++++. .+..++||||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~ 83 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMS 83 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecC
Confidence 46888999999999999999988888999999975432 2356899999999999999999999885 456899999999
Q ss_pred CCChhHhhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcccc
Q 001838 806 NGSLENRLYSG-TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSM 872 (1007)
Q Consensus 806 ~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~ 872 (1007)
+|+|.+++... ...+++..+.+++.|++.|++|| |+.+|+|+++. |++|||+++........ .
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~l---H~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~-~ 159 (260)
T cd05070 84 KGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYI---ERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYT-A 159 (260)
T ss_pred CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCccceEEEeCCceEEeCCceeeeeccCcccc-c
Confidence 99999999754 33588999999999999999999 56789999663 79999999876432211 1
Q ss_pred cccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchh
Q 001838 873 QTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEE 951 (1007)
Q Consensus 873 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~ 951 (1007)
.....++..|+|||+.....++.++|||||||++|||++ |+.||.+.... ...++.. .....
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~--~~~~~~~------------~~~~~--- 222 (260)
T cd05070 160 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR--EVLEQVE------------RGYRM--- 222 (260)
T ss_pred ccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHH------------cCCCC---
Confidence 122345678999999888889999999999999999999 89998753211 1111111 00000
Q ss_pred hhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 001838 952 RYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLK 991 (1007)
Q Consensus 952 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~ 991 (1007)
+.+...+.++.+++.+|++.+|++|||++++.+.|++
T Consensus 223 ---~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 223 ---PCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred ---CCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 0011223468999999999999999999999998875
No 171
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.98 E-value=5.5e-32 Score=299.52 Aligned_cols=248 Identities=25% Similarity=0.395 Sum_probs=190.1
Q ss_pred ccccccceecccCceEEEEEEEc-CCc--eEEEEEechh-hHHHHHHHHHHHHHHHhc-CCCceeEEEEEEecCCeeEEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGM--EVAVKVFHQR-YERALKSFQDECEVMKRI-RHRNLVKIISACSNDDFKALI 800 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~--~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv 800 (1007)
++|+..+.||+|+||+||+|..+ +|. .+|+|.++.. .....+.+.+|++++.++ +||||+++++++.+++..|+|
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv 86 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 86 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence 46888899999999999999865 454 4688877643 234456788999999999 899999999999999999999
Q ss_pred EEecCCCChhHhhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------
Q 001838 801 MEYMPNGSLENRLYSGT---------------CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------ 853 (1007)
Q Consensus 801 ~E~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------ 853 (1007)
|||+++|+|.++++... ..+++.++..++.|++.|++|| |+.+|+|++++
T Consensus 87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~L---H~~gi~H~dlkp~Nili~~~~~~ 163 (303)
T cd05088 87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVA 163 (303)
T ss_pred EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHH---HhCCccccccchheEEecCCCcE
Confidence 99999999999997432 2478889999999999999999 57899999764
Q ss_pred ccceeecceecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHh
Q 001838 854 HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVND 932 (1007)
Q Consensus 854 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~ 932 (1007)
||+|||+++..... .......++..|+|||++....++.++|||||||++|||+| |..||...... +....
T Consensus 164 kl~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-----~~~~~ 235 (303)
T cd05088 164 KIADFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-----ELYEK 235 (303)
T ss_pred EeCccccCcccchh---hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH-----HHHHH
Confidence 79999998743211 11112234678999999888889999999999999999998 99998643211 11111
Q ss_pred hcCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhc
Q 001838 933 LLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKIRDTLVKS 999 (1007)
Q Consensus 933 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~~~~~~~ 999 (1007)
. ....... .+.....++.+++.+||+.+|++||++.++++++.++.+.-..+
T Consensus 236 ~---------~~~~~~~------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~~~~ 287 (303)
T cd05088 236 L---------PQGYRLE------KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTY 287 (303)
T ss_pred H---------hcCCcCC------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhhhh
Confidence 0 0000000 00012346889999999999999999999999999887665444
No 172
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.98 E-value=7.9e-32 Score=299.97 Aligned_cols=250 Identities=26% Similarity=0.411 Sum_probs=192.7
Q ss_pred ccccccceecccCceEEEEEEEc--------CCceEEEEEechhh-HHHHHHHHHHHHHHHhc-CCCceeEEEEEEecCC
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ--------DGMEVAVKVFHQRY-ERALKSFQDECEVMKRI-RHRNLVKIISACSNDD 795 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~--------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~ 795 (1007)
++|...+.||+|+||.||+|+.. .+..||+|+++... ......+.+|+++++++ +||||++++++|...+
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG 91 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC
Confidence 57888999999999999999742 24579999987542 34456788999999999 5999999999999999
Q ss_pred eeEEEEEecCCCChhHhhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc--------
Q 001838 796 FKALIMEYMPNGSLENRLYSGT---------------CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV-------- 852 (1007)
Q Consensus 796 ~~~lv~E~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~-------- 852 (1007)
..++||||+++|+|.+++.... ..+++.++.+++.|++.||+|| |+.+|+|+++
T Consensus 92 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~l---H~~gi~H~dlkp~Nill~ 168 (314)
T cd05099 92 PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYL---ESRRCIHRDLAARNVLVT 168 (314)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHH---HHCCeeeccccceeEEEc
Confidence 9999999999999999996531 3478899999999999999999 5789999976
Q ss_pred ----cccceeecceecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHH
Q 001838 853 ----AHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLS 927 (1007)
Q Consensus 853 ----~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~ 927 (1007)
.|++|||+++...............++..|+|||++....++.++|||||||++|||++ |+.||...... ...
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~--~~~ 246 (314)
T cd05099 169 EDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVE--ELF 246 (314)
T ss_pred CCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHH--HHH
Confidence 48999999987643222211122335568999999988889999999999999999999 89998653211 111
Q ss_pred HHHHhhcCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHhhh
Q 001838 928 RWVNDLLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKIRDTLVK 998 (1007)
Q Consensus 928 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~~~~~~ 998 (1007)
.... ..... ..+...+.++.+++.+|++.+|++|||+.|+++.|+++.....+
T Consensus 247 ~~~~------------~~~~~------~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~~ 299 (314)
T cd05099 247 KLLR------------EGHRM------DKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAVSE 299 (314)
T ss_pred HHHH------------cCCCC------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHhcC
Confidence 1110 00000 00112234688999999999999999999999999999875443
No 173
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.98 E-value=2.3e-32 Score=312.23 Aligned_cols=241 Identities=20% Similarity=0.272 Sum_probs=182.6
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIM 801 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 801 (1007)
.+|+..+.||+|+||+||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.+++..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 36889999999999999999865 58999999997543 233466889999999999999999999999999999999
Q ss_pred EecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCC-
Q 001838 802 EYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQD- 868 (1007)
Q Consensus 802 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~- 868 (1007)
|||++|+|.+++.+.. .++......++.||+.||+|| |+.+|+|||++ ||+|||+|.......
T Consensus 81 E~~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~l---H~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~ 156 (376)
T cd05598 81 DYIPGGDMMSLLIRLG-IFEEDLARFYIAELTCAIESV---HKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD 156 (376)
T ss_pred eCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccc
Confidence 9999999999997654 478888888999999999999 57899999874 899999985321000
Q ss_pred ----------------------------------------cccccccccCCcccccccccccCCCCchhhHHHHHHHHHH
Q 001838 869 ----------------------------------------QLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLME 908 (1007)
Q Consensus 869 ----------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~e 908 (1007)
.........||+.|||||++.+..++.++|||||||++||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilye 236 (376)
T cd05598 157 SKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYE 236 (376)
T ss_pred ccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeee
Confidence 0000123479999999999998899999999999999999
Q ss_pred HHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCC---CHHHH
Q 001838 909 TFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRI---NAREI 985 (1007)
Q Consensus 909 lltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp---t~~ev 985 (1007)
|++|+.||......+. ........ ..... +.......++.+++.+|+ .+|++|+ ++.|+
T Consensus 237 ll~G~~Pf~~~~~~~~-----~~~i~~~~------~~~~~------~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~el 298 (376)
T cd05598 237 MLVGQPPFLADTPAET-----QLKVINWE------TTLHI------PSQAKLSREASDLILRLC-CGAEDRLGKNGADEI 298 (376)
T ss_pred hhhCCCCCCCCCHHHH-----HHHHhccC------ccccC------CCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHH
Confidence 9999999975422111 00000000 00000 000011335667777765 4999999 89999
Q ss_pred HHH
Q 001838 986 VTG 988 (1007)
Q Consensus 986 l~~ 988 (1007)
+++
T Consensus 299 l~h 301 (376)
T cd05598 299 KAH 301 (376)
T ss_pred hCC
Confidence 876
No 174
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.98 E-value=1.9e-31 Score=288.65 Aligned_cols=227 Identities=22% Similarity=0.354 Sum_probs=177.8
Q ss_pred ceecccCceEEEEEEEcC-------------CceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeE
Q 001838 732 NLLGIGSFGSVYVARLQD-------------GMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKA 798 (1007)
Q Consensus 732 ~~ig~G~~g~Vy~~~~~~-------------g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 798 (1007)
+.||+|+||+||+|+..+ ...||+|.+..........|.+|+.+++.++|||||++++++......+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 368999999999998532 2358999987665555678899999999999999999999999999999
Q ss_pred EEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc-------------------ccceee
Q 001838 799 LIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA-------------------HISDFS 859 (1007)
Q Consensus 799 lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~-------------------kl~DFG 859 (1007)
+||||+++|+|..++......+++..+.+++.||++|++|| |+.+|+|||++ |++|||
T Consensus 81 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g 157 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYL---EDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPG 157 (262)
T ss_pred EEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHh---hhCCeECCCCCcccEEEecCCccCCCCceeEeCCCC
Confidence 99999999999999887666689999999999999999999 67899999653 688999
Q ss_pred cceecCCCCcccccccccCCcccccccccc-cCCCCchhhHHHHHHHHHHHH-hCCCCCCccccCcchHHHHHHhhcCcc
Q 001838 860 IAKFLNGQDQLSMQTQTLATIGYMAPEYGV-QGRVSTRGDVYSYGIMLMETF-TGKKPTDEIFIGELSLSRWVNDLLPIS 937 (1007)
Q Consensus 860 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwS~Gvil~ell-tG~~p~~~~~~~~~~l~~~~~~~~~~~ 937 (1007)
++...... ....++..|+|||++. ...++.++|||||||++|||+ +|+.|+......+. ...
T Consensus 158 ~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~--~~~-------- 221 (262)
T cd05077 158 IPITVLSR------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEK--ERF-------- 221 (262)
T ss_pred CCccccCc------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHH--HHH--------
Confidence 88755321 2345788999999886 456899999999999999997 58888764321110 000
Q ss_pred HHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 001838 938 VMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGL 989 (1007)
Q Consensus 938 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L 989 (1007)
........ .....++.+++.+||+.||++||++.||++.+
T Consensus 222 ----~~~~~~~~--------~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 222 ----YEGQCMLV--------TPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred ----HhcCccCC--------CCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 00000000 00124578999999999999999999999875
No 175
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.98 E-value=5.8e-32 Score=307.01 Aligned_cols=248 Identities=22% Similarity=0.283 Sum_probs=187.9
Q ss_pred HHHHHhcccccccceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecC
Q 001838 719 HELLQATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIISACSND 794 (1007)
Q Consensus 719 ~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 794 (1007)
.++....++|...+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.++
T Consensus 36 ~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~ 115 (371)
T cd05622 36 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 115 (371)
T ss_pred hhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC
Confidence 344555689999999999999999999876 58899999987532 23345678999999999999999999999999
Q ss_pred CeeEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecce
Q 001838 795 DFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAK 862 (1007)
Q Consensus 795 ~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~ 862 (1007)
+..|+|||||++|+|.+++.... ++...+..++.|++.||+|| |+.+|+|||++ ||+|||+++
T Consensus 116 ~~~~lv~Ey~~gg~L~~~~~~~~--~~~~~~~~~~~qi~~aL~~L---H~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~ 190 (371)
T cd05622 116 RYLYMVMEYMPGGDLVNLMSNYD--VPEKWARFYTAEVVLALDAI---HSMGFIHRDVKPDNMLLDKSGHLKLADFGTCM 190 (371)
T ss_pred CEEEEEEcCCCCCcHHHHHHhcC--CCHHHHHHHHHHHHHHHHHH---HHCCEEeCCCCHHHEEECCCCCEEEEeCCcee
Confidence 99999999999999999987643 77888888999999999999 67899999774 899999998
Q ss_pred ecCCCCcccccccccCCcccccccccccC----CCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccH
Q 001838 863 FLNGQDQLSMQTQTLATIGYMAPEYGVQG----RVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISV 938 (1007)
Q Consensus 863 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~ 938 (1007)
....... .......||+.|||||++... .++.++|||||||++|||++|+.||....... .....
T Consensus 191 ~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~-~~~~i--------- 259 (371)
T cd05622 191 KMNKEGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG-TYSKI--------- 259 (371)
T ss_pred EcCcCCc-ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHH-HHHHH---------
Confidence 7643221 122345799999999998653 37899999999999999999999997532110 00000
Q ss_pred HHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCC--CCCHHHHHHHH
Q 001838 939 MEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGK--RINAREIVTGL 989 (1007)
Q Consensus 939 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~--Rpt~~evl~~L 989 (1007)
... ......+.......++.+++..|+..++.+ ||++.|++++.
T Consensus 260 ---~~~----~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 260 ---MNH----KNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred ---HcC----CCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence 000 000000001122446788999999844433 78999998864
No 176
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.98 E-value=8.2e-32 Score=300.62 Aligned_cols=230 Identities=22% Similarity=0.286 Sum_probs=180.6
Q ss_pred ceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhc-CCCceeEEEEEEecCCeeEEEEEecCC
Q 001838 732 NLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRI-RHRNLVKIISACSNDDFKALIMEYMPN 806 (1007)
Q Consensus 732 ~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~E~~~~ 806 (1007)
+.||+|+||+||+|+.. +|+.||||+++... ....+.+..|.+++..+ +||||+++++++.+++..|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 46899999999999876 58899999997643 23445678899999876 799999999999999999999999999
Q ss_pred CChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcccccc
Q 001838 807 GSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQT 874 (1007)
Q Consensus 807 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~~~ 874 (1007)
|+|..++.... .+++..+..++.|++.||.|| |+.+|+|||++ ||+|||+++....... ...
T Consensus 81 ~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~L---H~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~--~~~ 154 (321)
T cd05591 81 GDLMFQIQRSR-KFDEPRSRFYAAEVTLALMFL---HRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGV--TTT 154 (321)
T ss_pred CcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeeccCCCHHHeEECCCCCEEEeecccceecccCCc--ccc
Confidence 99999887654 478889999999999999999 57789999764 8999999986432221 223
Q ss_pred cccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhhH
Q 001838 875 QTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYF 954 (1007)
Q Consensus 875 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 954 (1007)
...||+.|+|||++....++.++|||||||++|||++|+.||......+ ..+ ..... ...
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~--~~~---~i~~~--------~~~------- 214 (321)
T cd05591 155 TFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDD--LFE---SILHD--------DVL------- 214 (321)
T ss_pred ccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHH--HHH---HHHcC--------CCC-------
Confidence 4569999999999988899999999999999999999999997532111 111 00000 000
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCC-------CHHHHHHH
Q 001838 955 AAKEQSLLSILNLATECTIESPGKRI-------NAREIVTG 988 (1007)
Q Consensus 955 ~~~~~~~~~~~~l~~~cl~~~p~~Rp-------t~~evl~~ 988 (1007)
.+.....++.+++.+|++.||++|| ++.+++++
T Consensus 215 -~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 215 -YPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred -CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 0001134688999999999999999 77777765
No 177
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.98 E-value=1e-31 Score=292.74 Aligned_cols=241 Identities=24% Similarity=0.376 Sum_probs=182.7
Q ss_pred cccceecccCceEEEEEEEcC-Cc--eEEEEEechh--hHHHHHHHHHHHHHHHhcCCCceeEEEEEEecC------Cee
Q 001838 729 SKNNLLGIGSFGSVYVARLQD-GM--EVAVKVFHQR--YERALKSFQDECEVMKRIRHRNLVKIISACSND------DFK 797 (1007)
Q Consensus 729 ~~~~~ig~G~~g~Vy~~~~~~-g~--~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------~~~ 797 (1007)
...+.||+|+||.||+|+..+ +. .||||.++.. .....+.+.+|++++++++||||+++++++... ...
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 456889999999999998764 33 5899988643 234457889999999999999999999987532 246
Q ss_pred EEEEEecCCCChhHhhhc-----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeec
Q 001838 798 ALIMEYMPNGSLENRLYS-----GTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSI 860 (1007)
Q Consensus 798 ~lv~E~~~~gsL~~~l~~-----~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGl 860 (1007)
++||||+++|+|.+++.. ....+++.....++.|++.|++||| +++|+|||++ ||+|||+
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 158 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLS---SKSFIHRDLAARNCMLNENMNVCVADFGL 158 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhheEEcCCCCEEECCCCc
Confidence 899999999999988742 2235789999999999999999994 6789999764 8999999
Q ss_pred ceecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHH
Q 001838 861 AKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVM 939 (1007)
Q Consensus 861 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~ 939 (1007)
++...............+++.|+|||+.....++.++|||||||++|||++ |+.||...... .+.+.+.. ..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~~~~~---~~-- 231 (272)
T cd05075 159 SKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS--EIYDYLRQ---GN-- 231 (272)
T ss_pred ccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHc---CC--
Confidence 997653322211223346778999999988889999999999999999999 88998653211 11111100 00
Q ss_pred HHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHH
Q 001838 940 EVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKI 992 (1007)
Q Consensus 940 ~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i 992 (1007)
... .+...+..+.+++.+||+.+|++|||+.|++++|+++
T Consensus 232 ------~~~-------~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 232 ------RLK-------QPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred ------CCC-------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 000 0011234688999999999999999999999999874
No 178
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.98 E-value=5e-32 Score=324.79 Aligned_cols=243 Identities=21% Similarity=0.297 Sum_probs=187.1
Q ss_pred HHhcccccccceecccCceEEEEEEEc-CCceEEEEEechh--hHHHHHHHHHHHHHHHhcCCCceeEEEEEEec--CCe
Q 001838 722 LQATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQR--YERALKSFQDECEVMKRIRHRNLVKIISACSN--DDF 796 (1007)
Q Consensus 722 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~ 796 (1007)
....++|.+.+.||+|+||+||+|+.. ++..||+|++... .......|..|+.++++++|||||+++++|.+ ...
T Consensus 9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ 88 (1021)
T PTZ00266 9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQK 88 (1021)
T ss_pred ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCE
Confidence 344578999999999999999999876 5788999998643 23445678999999999999999999998864 356
Q ss_pred eEEEEEecCCCChhHhhhcC---CCCCCHHHHHHHHHHHHHHHHHHHhcC----CCCceeccc-----------------
Q 001838 797 KALIMEYMPNGSLENRLYSG---TCMLDIFQRLNIMIDVALALEYLHFGH----STPIIHYMV----------------- 852 (1007)
Q Consensus 797 ~~lv~E~~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~~l~yLH~~~----~~~ivH~~~----------------- 852 (1007)
.|+||||+++|+|.+++... ...+++..++.|+.||+.||+|||... ..+|||+|+
T Consensus 89 lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i 168 (1021)
T PTZ00266 89 LYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKI 168 (1021)
T ss_pred EEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccc
Confidence 89999999999999999642 245899999999999999999998532 256999854
Q ss_pred ------------cccceeecceecCCCCcccccccccCCccccccccccc--CCCCchhhHHHHHHHHHHHHhCCCCCCc
Q 001838 853 ------------AHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQ--GRVSTRGDVYSYGIMLMETFTGKKPTDE 918 (1007)
Q Consensus 853 ------------~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwS~Gvil~elltG~~p~~~ 918 (1007)
+||+|||+++...... ......||+.|+|||++.. ..++.++|||||||++|||+||+.||..
T Consensus 169 ~~~~~n~ng~~iVKLsDFGlAr~l~~~s---~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~ 245 (1021)
T PTZ00266 169 TAQANNLNGRPIAKIGDFGLSKNIGIES---MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHK 245 (1021)
T ss_pred cccccccCCCCceEEccCCccccccccc---cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCc
Confidence 4789999998764322 1234579999999998854 4589999999999999999999999974
Q ss_pred cccCcchHHHHHHhhcCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001838 919 IFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVT 987 (1007)
Q Consensus 919 ~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~ 987 (1007)
.. ....++...... +.+. ....+.++.+|+..||+.+|.+||++.|+++
T Consensus 246 ~~----~~~qli~~lk~~-------p~lp---------i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 246 AN----NFSQLISELKRG-------PDLP---------IKGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred CC----cHHHHHHHHhcC-------CCCC---------cCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 21 111111111000 0000 0011346889999999999999999999985
No 179
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.98 E-value=4e-32 Score=303.83 Aligned_cols=236 Identities=19% Similarity=0.293 Sum_probs=180.6
Q ss_pred ceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhc-CCCceeEEEEEEecCCeeEEEEEecCC
Q 001838 732 NLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRI-RHRNLVKIISACSNDDFKALIMEYMPN 806 (1007)
Q Consensus 732 ~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~E~~~~ 806 (1007)
+.||+|+||+||+|+.. +++.||+|+++... ....+.+.+|+.++.++ +|||||++++++...+..|+|||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 46999999999999976 58899999998642 23445678899998887 799999999999999999999999999
Q ss_pred CChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcccccc
Q 001838 807 GSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQT 874 (1007)
Q Consensus 807 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~~~ 874 (1007)
|+|..++.... .+++..+..++.|++.||+|| |+.+|+|||++ ||+|||+++....... ...
T Consensus 81 ~~L~~~~~~~~-~l~~~~~~~i~~qi~~~l~~l---H~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~--~~~ 154 (329)
T cd05618 81 GDLMFHMQRQR-KLPEEHARFYSAEISLALNYL---HERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTS 154 (329)
T ss_pred CCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCC--ccc
Confidence 99998886543 488999999999999999999 57799999774 8999999986432211 123
Q ss_pred cccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCc---chHHHHHHhhcCccHHHHhhhhhccchh
Q 001838 875 QTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGE---LSLSRWVNDLLPISVMEVIDTNLLSGEE 951 (1007)
Q Consensus 875 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~---~~l~~~~~~~~~~~~~~~~d~~~~~~~~ 951 (1007)
...||+.|+|||++.+..++.++|||||||++|||++|+.||....... .....++... ......
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~-------i~~~~~----- 222 (329)
T cd05618 155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQV-------ILEKQI----- 222 (329)
T ss_pred cccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHH-------HhcCCC-----
Confidence 4579999999999999999999999999999999999999996321111 1111111110 000000
Q ss_pred hhHHHHHHHHHHHHHHHhhcCCCCCCCCCCH------HHHHHH
Q 001838 952 RYFAAKEQSLLSILNLATECTIESPGKRINA------REIVTG 988 (1007)
Q Consensus 952 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~------~evl~~ 988 (1007)
..+.....++.+++.+||+.||++||++ .|++++
T Consensus 223 ---~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05618 223 ---RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 262 (329)
T ss_pred ---CCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence 0011223467899999999999999984 566554
No 180
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.97 E-value=7.6e-32 Score=300.35 Aligned_cols=230 Identities=22% Similarity=0.282 Sum_probs=181.3
Q ss_pred ceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhc-CCCceeEEEEEEecCCeeEEEEEecCC
Q 001838 732 NLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRI-RHRNLVKIISACSNDDFKALIMEYMPN 806 (1007)
Q Consensus 732 ~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~E~~~~ 806 (1007)
+.||+|+||+||+|+.. +++.||||+++... ....+.+..|.+++..+ +||||+++++++.+.+..|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999876 58899999998653 23345678899999888 699999999999999999999999999
Q ss_pred CChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcccccc
Q 001838 807 GSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQT 874 (1007)
Q Consensus 807 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~~~ 874 (1007)
|+|.+++.+.. .+++..+..++.|++.||.|| |+.+|+||+++ ||+|||+++....... ...
T Consensus 81 ~~L~~~~~~~~-~l~~~~~~~~~~qi~~~l~~L---H~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~--~~~ 154 (318)
T cd05570 81 GDLMFHIQRSG-RFDEPRARFYAAEIVLGLQFL---HERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGV--TTS 154 (318)
T ss_pred CCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCC--ccc
Confidence 99999887653 489999999999999999999 67899999764 8999999976422211 123
Q ss_pred cccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhhH
Q 001838 875 QTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYF 954 (1007)
Q Consensus 875 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 954 (1007)
...||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...... ......
T Consensus 155 ~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~-----~~~~~i--------~~~~~~------- 214 (318)
T cd05570 155 TFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDED-----ELFQSI--------LEDEVR------- 214 (318)
T ss_pred ceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHH-----HHHHHH--------HcCCCC-------
Confidence 356899999999999899999999999999999999999999753211 111100 000000
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCH-----HHHHHH
Q 001838 955 AAKEQSLLSILNLATECTIESPGKRINA-----REIVTG 988 (1007)
Q Consensus 955 ~~~~~~~~~~~~l~~~cl~~~p~~Rpt~-----~evl~~ 988 (1007)
.+.....++.+++.+||+.||++||++ .++++.
T Consensus 215 -~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 215 -YPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred -CCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence 001123468899999999999999999 777664
No 181
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.97 E-value=8.3e-32 Score=295.51 Aligned_cols=260 Identities=26% Similarity=0.375 Sum_probs=194.7
Q ss_pred ccccccceecccCceEEEEEEEc-----CCceEEEEEechhhHH-HHHHHHHHHHHHHhcCCCceeEEEEEEec--CCee
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-----DGMEVAVKVFHQRYER-ALKSFQDECEVMKRIRHRNLVKIISACSN--DDFK 797 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-----~g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~ 797 (1007)
+.|...+.||+|+||.||+|++. ++..||||++...... ..+.|.+|++++++++||||+++++++.. ....
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 35677789999999999999854 3688999999765432 46789999999999999999999999987 5578
Q ss_pred EEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecC
Q 001838 798 ALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLN 865 (1007)
Q Consensus 798 ~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~ 865 (1007)
++||||+++|+|.+++......+++..+..++.|++.||+|| |+.+++|++++ |++|||.+....
T Consensus 84 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~l---H~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYL---GSQRYIHRDLAARNILVESEDLVKISDFGLAKVLP 160 (284)
T ss_pred EEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHhEEEcCCCCEEEcccccccccc
Confidence 999999999999999987665689999999999999999999 56789999764 899999998775
Q ss_pred CCCcc-cccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhh
Q 001838 866 GQDQL-SMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDT 944 (1007)
Q Consensus 866 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~ 944 (1007)
..... .......++..|+|||......++.++|||||||++|||+||+.|+......... ++...........+..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~ 237 (284)
T cd05038 161 EDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLR---MIGIAQGQMIVTRLLE 237 (284)
T ss_pred cCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhcc---ccccccccccHHHHHH
Confidence 32221 1112234566799999998888999999999999999999999998653221111 1100000001111111
Q ss_pred hhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHH
Q 001838 945 NLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKIR 993 (1007)
Q Consensus 945 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~ 993 (1007)
.+..... ...+..++.++.+++.+||+.+|++||||.||+++|++|+
T Consensus 238 ~~~~~~~--~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i~ 284 (284)
T cd05038 238 LLKEGER--LPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRLR 284 (284)
T ss_pred HHHcCCc--CCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhcC
Confidence 1110000 0111223457899999999999999999999999999863
No 182
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.97 E-value=1.6e-31 Score=296.83 Aligned_cols=256 Identities=19% Similarity=0.246 Sum_probs=187.5
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEe
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEY 803 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~ 803 (1007)
++|...+.||+|+||+||+|+.+ +++.||+|+++... ......+.+|++++++++||||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 57888999999999999999876 58899999987443 22234577899999999999999999999999999999999
Q ss_pred cCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCccc
Q 001838 804 MPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLS 871 (1007)
Q Consensus 804 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~ 871 (1007)
+++ +|.+++......+++..+..++.|++.||+|| |+.+|+|||++ ||+|||+++.......
T Consensus 86 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~l---H~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-- 159 (309)
T cd07872 86 LDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYC---HRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTK-- 159 (309)
T ss_pred CCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEECCCCCEEECccccceecCCCcc--
Confidence 985 89888876665688999999999999999999 57899999764 8999999986532221
Q ss_pred ccccccCCccccccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhc--CccHHHHh------
Q 001838 872 MQTQTLATIGYMAPEYGVQ-GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLL--PISVMEVI------ 942 (1007)
Q Consensus 872 ~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~--~~~~~~~~------ 942 (1007)
......+|+.|+|||++.+ ..++.++|||||||++|||+||+.||......+. +........ +......+
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
T cd07872 160 TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDE-LHLIFRLLGTPTEETWPGISSNDEF 238 (309)
T ss_pred ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCCHHHHhhhcchhhh
Confidence 1223467899999998765 4589999999999999999999999975432111 111111100 00000000
Q ss_pred -hhhhccc-hhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 943 -DTNLLSG-EERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 943 -d~~~~~~-~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
+...... .............++.+++.+|++.||++|||+.|++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 286 (309)
T cd07872 239 KNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKH 286 (309)
T ss_pred hhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcC
Confidence 0000000 000000111234568899999999999999999999874
No 183
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.97 E-value=9.9e-32 Score=296.67 Aligned_cols=250 Identities=24% Similarity=0.383 Sum_probs=187.7
Q ss_pred ccccccceecccCceEEEEEEEc-----------------CCceEEEEEechh-hHHHHHHHHHHHHHHHhcCCCceeEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-----------------DGMEVAVKVFHQR-YERALKSFQDECEVMKRIRHRNLVKI 787 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-----------------~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l 787 (1007)
++|+..+.||+|+||+||++... ++..||+|++... .....+++.+|++++++++||||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 56888999999999999998532 2346999999754 34445789999999999999999999
Q ss_pred EEEEecCCeeEEEEEecCCCChhHhhhcCC----------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc----
Q 001838 788 ISACSNDDFKALIMEYMPNGSLENRLYSGT----------CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA---- 853 (1007)
Q Consensus 788 ~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~----------~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~---- 853 (1007)
++++...+..++||||+++|+|.+++.... ..+++..+.+++.|++.|++|| |+.+++|++++
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~l---H~~~i~H~dlkp~Ni 161 (296)
T cd05095 85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYL---SSLNFVHRDLATRNC 161 (296)
T ss_pred EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHH---HHCCeecccCChheE
Confidence 999999999999999999999999987532 2367788999999999999999 56789999764
Q ss_pred --------ccceeecceecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh--CCCCCCccccCc
Q 001838 854 --------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT--GKKPTDEIFIGE 923 (1007)
Q Consensus 854 --------kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt--G~~p~~~~~~~~ 923 (1007)
+++|||+++...............++..|+|||+...+.++.++|||||||++|||++ |..||......+
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~ 241 (296)
T cd05095 162 LVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQ 241 (296)
T ss_pred EEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHH
Confidence 8999999987643322222223345678999999888889999999999999999998 678876432111
Q ss_pred chHHHHHHhhcCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 001838 924 LSLSRWVNDLLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLK 991 (1007)
Q Consensus 924 ~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~ 991 (1007)
++... .+.......... .+.+..++..+.+++.+||+.||++||++.||.+.|++
T Consensus 242 -----~~~~~-----~~~~~~~~~~~~---~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 242 -----VIENT-----GEFFRDQGRQVY---LPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred -----HHHHH-----HHHHhhcccccc---CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 11100 000000000000 00011123568899999999999999999999999863
No 184
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.97 E-value=1e-31 Score=301.52 Aligned_cols=240 Identities=24% Similarity=0.298 Sum_probs=183.9
Q ss_pred cccccceecccCceEEEEEEEc----CCceEEEEEechhh----HHHHHHHHHHHHHHHhcC-CCceeEEEEEEecCCee
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQ----DGMEVAVKVFHQRY----ERALKSFQDECEVMKRIR-HRNLVKIISACSNDDFK 797 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~----~g~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~ 797 (1007)
+|+..+.||+|+||+||+++.. +|+.||+|++.... ....+.+..|+.++++++ ||||+++++++..++..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 4778899999999999999753 58899999997542 233456888999999994 99999999999999999
Q ss_pred EEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecC
Q 001838 798 ALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLN 865 (1007)
Q Consensus 798 ~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~ 865 (1007)
++||||+++|+|.+++..+. .+++..+..++.||+.||+|| |+.+|+|||++ ||+|||+++...
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~l---H~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~ 156 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRD-NFSEDEVRFYSGEIILALEHL---HKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFL 156 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCcEecCCCHHHeEECCCCCEEEeeCcCCcccc
Confidence 99999999999999997654 488899999999999999999 57789999764 899999998653
Q ss_pred CCCcccccccccCCcccccccccccC-CCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhh
Q 001838 866 GQDQLSMQTQTLATIGYMAPEYGVQG-RVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDT 944 (1007)
Q Consensus 866 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~ 944 (1007)
..... ......||+.|+|||++.+. .++.++|||||||++|||+||+.||........ .......... .++
T Consensus 157 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-~~~~~~~~~~------~~~ 228 (332)
T cd05614 157 SEEKE-RTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNT-QSEVSRRILK------CDP 228 (332)
T ss_pred ccCCC-ccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCC-HHHHHHHHhc------CCC
Confidence 32211 12345799999999998765 478999999999999999999999974321111 1111110000 000
Q ss_pred hhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCC-----CHHHHHHH
Q 001838 945 NLLSGEERYFAAKEQSLLSILNLATECTIESPGKRI-----NAREIVTG 988 (1007)
Q Consensus 945 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~evl~~ 988 (1007)
.. +......+.+++.+|++.||++|| ++.|++++
T Consensus 229 ~~----------~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 229 PF----------PSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred CC----------CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 00 011234678999999999999999 67788764
No 185
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.97 E-value=1.6e-31 Score=290.79 Aligned_cols=240 Identities=21% Similarity=0.302 Sum_probs=176.5
Q ss_pred ceecccCceEEEEEEEcC---CceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecCCC
Q 001838 732 NLLGIGSFGSVYVARLQD---GMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNG 807 (1007)
Q Consensus 732 ~~ig~G~~g~Vy~~~~~~---g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~g 807 (1007)
+.||+|+||.||+|...+ +..+|+|.++... ......+.+|+.++++++||||+++++++.+....++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 358999999999998653 4579999987543 233457889999999999999999999999999999999999999
Q ss_pred ChhHhhhcCC----CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCccc
Q 001838 808 SLENRLYSGT----CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLS 871 (1007)
Q Consensus 808 sL~~~l~~~~----~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~~~ 871 (1007)
+|.+++.... ...++..+.+++.|++.|++|| |+.+++|+++ +|++|||+++.........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~l---H~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~ 157 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHL---HKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV 157 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHH---HHCCEeccccCcceEEEcCCCcEEECCccccccccCcceee
Confidence 9999997532 2456777888999999999999 5778999976 4899999998654332222
Q ss_pred ccccccCCcccccccccccC-------CCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHHHHhh
Q 001838 872 MQTQTLATIGYMAPEYGVQG-------RVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEVID 943 (1007)
Q Consensus 872 ~~~~~~gt~~y~aPE~~~~~-------~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d 943 (1007)
......|+..|+|||++... .++.++|||||||++|||++ |+.||......+. ..+... .......+
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~--~~~~~~---~~~~~~~~ 232 (269)
T cd05087 158 TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQV--LTYTVR---EQQLKLPK 232 (269)
T ss_pred cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHH--HHHHhh---cccCCCCC
Confidence 22334578899999987542 35889999999999999996 9999975322111 111000 00000000
Q ss_pred hhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 001838 944 TNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLL 990 (1007)
Q Consensus 944 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~ 990 (1007)
+... ......+.+++.+|+ .+|++|||++||++.|+
T Consensus 233 ~~~~----------~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 233 PRLK----------LPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CccC----------CCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 1000 011235778889999 58999999999998874
No 186
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.97 E-value=2.1e-31 Score=292.12 Aligned_cols=238 Identities=21% Similarity=0.290 Sum_probs=184.5
Q ss_pred ccccceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEe
Q 001838 728 FSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEY 803 (1007)
Q Consensus 728 ~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~ 803 (1007)
|+..+.||+|+||+||+|... +++.||+|.+.... ....+.+.+|++++++++|+||+++.+++..++..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 566788999999999999875 68999999987543 22234578899999999999999999999999999999999
Q ss_pred cCCCChhHhhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcc
Q 001838 804 MPNGSLENRLYSG-TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQL 870 (1007)
Q Consensus 804 ~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~ 870 (1007)
+++|+|.+++... ...+++..+..++.|++.||.|| |+.+|+||+++ ||+|||++........
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~l---H~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~- 157 (285)
T cd05632 82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDL---HRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGES- 157 (285)
T ss_pred ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCCc-
Confidence 9999999888653 33589999999999999999999 57889999764 8999999986543221
Q ss_pred cccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccch
Q 001838 871 SMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGE 950 (1007)
Q Consensus 871 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~ 950 (1007)
.....|+..|+|||++.+..++.++|||||||++|||++|+.||........ ...+ +.......
T Consensus 158 --~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~-~~~~-------------~~~~~~~~ 221 (285)
T cd05632 158 --IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVK-REEV-------------DRRVLETE 221 (285)
T ss_pred --ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH-HHHH-------------HHhhhccc
Confidence 1345689999999999888899999999999999999999999975321110 0111 11000000
Q ss_pred hhhHHHHHHHHHHHHHHHhhcCCCCCCCCCC-----HHHHHHH
Q 001838 951 ERYFAAKEQSLLSILNLATECTIESPGKRIN-----AREIVTG 988 (1007)
Q Consensus 951 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt-----~~evl~~ 988 (1007)
.. .......++.+++.+|++.||++||+ +.|+++.
T Consensus 222 ~~---~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 222 EV---YSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred cc---cCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence 00 01112346789999999999999999 5666664
No 187
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.97 E-value=3.9e-32 Score=303.76 Aligned_cols=231 Identities=21% Similarity=0.266 Sum_probs=181.9
Q ss_pred ceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecCCC
Q 001838 732 NLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNG 807 (1007)
Q Consensus 732 ~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~g 807 (1007)
+.||+|+||+||+|+.. +|+.||+|+++... ......+.+|++++++++||||+++++++...+..|+||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999865 68999999997643 233466788999999999999999999999999999999999999
Q ss_pred ChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCccccccc
Q 001838 808 SLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQ 875 (1007)
Q Consensus 808 sL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~~~~ 875 (1007)
+|.+++.... .+++..+..++.|++.||+||| ...+|+|||++ ||+|||+++....... ....
T Consensus 81 ~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH--~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~--~~~~ 155 (325)
T cd05594 81 ELFFHLSRER-VFSEDRARFYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA--TMKT 155 (325)
T ss_pred cHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH--hcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCc--cccc
Confidence 9999887654 4889999999999999999995 23789999764 8999999986432211 1234
Q ss_pred ccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhhHH
Q 001838 876 TLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYFA 955 (1007)
Q Consensus 876 ~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 955 (1007)
..||+.|+|||++.+..++.++|||||||++|||+||+.||....... ..+.+. .....
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~--~~~~i~-----------~~~~~-------- 214 (325)
T cd05594 156 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK--LFELIL-----------MEEIR-------- 214 (325)
T ss_pred ccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHH--HHHHHh-----------cCCCC--------
Confidence 569999999999988899999999999999999999999997532110 111000 00000
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCC-----CHHHHHHH
Q 001838 956 AKEQSLLSILNLATECTIESPGKRI-----NAREIVTG 988 (1007)
Q Consensus 956 ~~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~evl~~ 988 (1007)
.+.....++.+++.+|++.||++|+ ++.|++++
T Consensus 215 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 215 FPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred CCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 0011234688999999999999997 89999865
No 188
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.97 E-value=6.5e-32 Score=294.37 Aligned_cols=241 Identities=20% Similarity=0.280 Sum_probs=184.4
Q ss_pred HhcccccccceecccCceEEEEEEEc-CCceEEEEEechhhHHHHHHHHHHHHHHHhc-CCCceeEEEEEEecC------
Q 001838 723 QATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKSFQDECEVMKRI-RHRNLVKIISACSND------ 794 (1007)
Q Consensus 723 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~------ 794 (1007)
.+++.|+..+.||+|+||+||+|... +++.||+|++.... .....+..|+.+++++ +||||++++++|...
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 45678888999999999999999865 58899999986543 2235678899999998 699999999998753
Q ss_pred CeeEEEEEecCCCChhHhhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecc
Q 001838 795 DFKALIMEYMPNGSLENRLYSG-TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIA 861 (1007)
Q Consensus 795 ~~~~lv~E~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla 861 (1007)
...|+||||+++|+|.+++... ...+++..+..++.|++.|++||| +.+|+|+++ +||+|||++
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH---~~~ivh~dl~~~nili~~~~~~~l~Dfg~~ 158 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVS 158 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHEEECCCCCEEEccCCCc
Confidence 4689999999999999999864 345889999999999999999995 678999966 389999999
Q ss_pred eecCCCCcccccccccCCcccccccccc-----cCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCc
Q 001838 862 KFLNGQDQLSMQTQTLATIGYMAPEYGV-----QGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPI 936 (1007)
Q Consensus 862 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~ 936 (1007)
+...... .......|+..|+|||++. ...++.++|||||||++|||++|+.||....... .+.... ..
T Consensus 159 ~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~----~~~~~~-~~ 231 (272)
T cd06637 159 AQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR----ALFLIP-RN 231 (272)
T ss_pred eeccccc--ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHH----HHHHHh-cC
Confidence 8764321 1123456899999999876 3458889999999999999999999986432111 110000 00
Q ss_pred cHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 937 SVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 937 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
..... .....+.++.+++.+||+.+|.+|||+.|+++.
T Consensus 232 -----~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 269 (272)
T cd06637 232 -----PAPRL---------KSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKH 269 (272)
T ss_pred -----CCCCC---------CCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence 00000 001123468899999999999999999999863
No 189
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.97 E-value=1.9e-31 Score=288.72 Aligned_cols=241 Identities=24% Similarity=0.413 Sum_probs=188.6
Q ss_pred ccccccceecccCceEEEEEEEcCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecC
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMP 805 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~ 805 (1007)
++|...+.||+|+||+||+|+..++..||+|+++.... ..+.+.+|++++++++||||+++++++.+ +..++||||++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~~ 83 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS 83 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEEcCC
Confidence 56888999999999999999987777899999975332 23578899999999999999999998754 55799999999
Q ss_pred CCChhHhhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCcccc
Q 001838 806 NGSLENRLYSG-TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLSM 872 (1007)
Q Consensus 806 ~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~~~~ 872 (1007)
+|+|.+++.+. ...+++..+..++.|++.||+|+ |+.+++|+++ +||+|||.++........ .
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~l---H~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~-~ 159 (262)
T cd05071 84 KGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV---ERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-A 159 (262)
T ss_pred CCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHH---HHCCccccccCcccEEEcCCCcEEeccCCceeeccccccc-c
Confidence 99999999764 34578999999999999999999 5788999976 389999999876433221 1
Q ss_pred cccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchh
Q 001838 873 QTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEE 951 (1007)
Q Consensus 873 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~ 951 (1007)
.....++..|+|||+.....++.++|||||||++|||+| |+.||......+ . .+.+.....
T Consensus 160 ~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~--~------------~~~~~~~~~---- 221 (262)
T cd05071 160 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE--V------------LDQVERGYR---- 221 (262)
T ss_pred ccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHH--H------------HHHHhcCCC----
Confidence 123346778999999988889999999999999999999 888887532111 0 000100000
Q ss_pred hhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHH
Q 001838 952 RYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKI 992 (1007)
Q Consensus 952 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i 992 (1007)
.......+.++.+++.+|++.+|++||++.++.+.|++.
T Consensus 222 --~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 222 --MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred --CCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 000112345689999999999999999999999998863
No 190
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.6e-32 Score=275.89 Aligned_cols=260 Identities=20% Similarity=0.290 Sum_probs=198.4
Q ss_pred cHHHHHHhcccccccceecccCceEEEEEE-EcCCceEEEEEechhhHHHHHHHHHHHHHHHhcC-CCceeEEEEEEecC
Q 001838 717 SYHELLQATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRYERALKSFQDECEVMKRIR-HRNLVKIISACSND 794 (1007)
Q Consensus 717 ~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~ 794 (1007)
.+.|+-+.| .+.+|+|+||.|--|. ..+|.++|||++.+.....+.+..+|++++.+.+ |+||++++++|+++
T Consensus 74 ~F~d~YkLt-----~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd 148 (463)
T KOG0607|consen 74 KFEDMYKLT-----SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDD 148 (463)
T ss_pred hHHHHHHhH-----HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhccc
Confidence 356666665 3789999999999987 6789999999999886666788999999999996 99999999999999
Q ss_pred CeeEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc---------------ccceee
Q 001838 795 DFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA---------------HISDFS 859 (1007)
Q Consensus 795 ~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~---------------kl~DFG 859 (1007)
..+|||||-|.||+|..++.++. .+.+.++.++..+||.||+|| |.++|.|||++ |||||.
T Consensus 149 ~~FYLVfEKm~GGplLshI~~~~-~F~E~EAs~vvkdia~aLdFl---H~kgIAHRDlKPENiLC~~pn~vsPvKiCDfD 224 (463)
T KOG0607|consen 149 TRFYLVFEKMRGGPLLSHIQKRK-HFNEREASRVVKDIASALDFL---HTKGIAHRDLKPENILCESPNKVSPVKICDFD 224 (463)
T ss_pred ceEEEEEecccCchHHHHHHHhh-hccHHHHHHHHHHHHHHHHHH---hhcCcccccCCccceeecCCCCcCceeeeccc
Confidence 99999999999999999998765 488889999999999999999 78999999875 899999
Q ss_pred cceecCCCCc-----ccccccccCCcccccccccc-----cCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHH
Q 001838 860 IAKFLNGQDQ-----LSMQTQTLATIGYMAPEYGV-----QGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRW 929 (1007)
Q Consensus 860 la~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~ 929 (1007)
++.-+..... .....+.+|+..|||||+.. ...|+.++|.||+|||+|-|++|.+||.+....+ .-|
T Consensus 225 LgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~d---CGW 301 (463)
T KOG0607|consen 225 LGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGAD---CGW 301 (463)
T ss_pred cccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCc---CCc
Confidence 9865432111 11123567999999999753 2468999999999999999999999998754422 122
Q ss_pred HHhhcCccHHHHhhhhhccchh-hhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 930 VNDLLPISVMEVIDTNLLSGEE-RYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 930 ~~~~~~~~~~~~~d~~~~~~~~-~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
-+.-.-..-.+.+-..+..+.. .+.......+.+..+++...+..|+.+|.++.+++++
T Consensus 302 drGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnh 361 (463)
T KOG0607|consen 302 DRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNH 361 (463)
T ss_pred cCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCC
Confidence 2111111111111111222211 1112233456678889999999999999999999883
No 191
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.97 E-value=1.5e-31 Score=288.92 Aligned_cols=236 Identities=25% Similarity=0.362 Sum_probs=186.1
Q ss_pred ceecccCceEEEEEEEcC--C--ceEEEEEechhhH-HHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecCC
Q 001838 732 NLLGIGSFGSVYVARLQD--G--MEVAVKVFHQRYE-RALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPN 806 (1007)
Q Consensus 732 ~~ig~G~~g~Vy~~~~~~--g--~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~ 806 (1007)
+.||+|+||+||+|.+.+ + ..||||.+..... ...+.+.+|+.++++++|||||++++++.. ...++||||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 468999999999998653 3 3699999986654 566789999999999999999999999988 889999999999
Q ss_pred CChhHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCc-ccc
Q 001838 807 GSLENRLYSGT-CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQ-LSM 872 (1007)
Q Consensus 807 gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~-~~~ 872 (1007)
|+|.+++.+.. ..+++.....++.|++.||+|| |+.+++|+++ .|++|||+++....... ...
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~l---H~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 156 (257)
T cd05040 80 GSLLDRLRKDALGHFLISTLCDYAVQIANGMRYL---ESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVM 156 (257)
T ss_pred CcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHH---HhCCccccccCcccEEEecCCEEEeccccccccccccccceec
Confidence 99999997654 4689999999999999999999 5779999976 48999999987754222 112
Q ss_pred cccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchh
Q 001838 873 QTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEE 951 (1007)
Q Consensus 873 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~ 951 (1007)
.....++..|+|||++....++.++|||||||++|||++ |+.||......+ ..+...... ...
T Consensus 157 ~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~~~~~~~~~---------~~~----- 220 (257)
T cd05040 157 EEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQ--ILKKIDKEG---------ERL----- 220 (257)
T ss_pred ccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHhcC---------CcC-----
Confidence 223457889999999988899999999999999999999 999986432111 111111000 000
Q ss_pred hhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 001838 952 RYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLL 990 (1007)
Q Consensus 952 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~ 990 (1007)
..+...+..+.+++.+|++.+|++||++.|+++.|.
T Consensus 221 ---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 221 ---ERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred ---CCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 001122456889999999999999999999999875
No 192
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.97 E-value=1.9e-31 Score=287.90 Aligned_cols=238 Identities=25% Similarity=0.339 Sum_probs=190.8
Q ss_pred ccccccceecccCceEEEEEEEcC-CceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEec
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYM 804 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~ 804 (1007)
++|+..+.||+|+||.||+|...+ ++.||+|.+..... .+++.+|++++++++||||+++++++.++...|+++||+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~ 80 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC 80 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence 678889999999999999999764 88999999976533 578999999999999999999999999999999999999
Q ss_pred CCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCcccc
Q 001838 805 PNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLSM 872 (1007)
Q Consensus 805 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~~~~ 872 (1007)
++++|.+++......+++..+..++.|++.|+.|| |..+++|+++ .|++|||++........ .
T Consensus 81 ~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~l---h~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~--~ 155 (256)
T cd06612 81 GAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYL---HSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA--K 155 (256)
T ss_pred CCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCcceEEECCCCcEEEcccccchhcccCcc--c
Confidence 99999999976666789999999999999999999 5678999866 48999999987653321 1
Q ss_pred cccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhh
Q 001838 873 QTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEER 952 (1007)
Q Consensus 873 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~ 952 (1007)
.....|+..|+|||++.+..++.++|||||||++|||++|+.||.......... .+..... .
T Consensus 156 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~--------------~~~~~~~----~ 217 (256)
T cd06612 156 RNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIF--------------MIPNKPP----P 217 (256)
T ss_pred cccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhh--------------hhccCCC----C
Confidence 233458889999999988889999999999999999999999987532211000 0000000 0
Q ss_pred hHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 953 YFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 953 ~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
....+.....++.+++.+|++.+|++|||+.||++.
T Consensus 218 ~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~ 253 (256)
T cd06612 218 TLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQH 253 (256)
T ss_pred CCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcC
Confidence 000111223468899999999999999999999863
No 193
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.97 E-value=6.5e-32 Score=300.43 Aligned_cols=228 Identities=21% Similarity=0.278 Sum_probs=177.6
Q ss_pred ceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhc-CCCceeEEEEEEecCCeeEEEEEecCC
Q 001838 732 NLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRI-RHRNLVKIISACSNDDFKALIMEYMPN 806 (1007)
Q Consensus 732 ~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~E~~~~ 806 (1007)
+.||+|+||+||+|+.. +|+.||||+++... ....+.+..|..++... +||||+++++++.+.+..|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999976 58899999998643 22345667788888765 899999999999999999999999999
Q ss_pred CChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcccccc
Q 001838 807 GSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQT 874 (1007)
Q Consensus 807 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~~~ 874 (1007)
|+|.+++..+. .+++..+..++.|++.||+|| |+.+|+|||++ ||+|||+++....... ...
T Consensus 81 g~L~~~i~~~~-~~~~~~~~~~~~qi~~~l~~l---H~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~ 154 (316)
T cd05620 81 GDLMFHIQDKG-RFDLYRATFYAAEIVCGLQFL---HSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDN--RAS 154 (316)
T ss_pred CcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCC--cee
Confidence 99999987643 478889999999999999999 57799999764 8999999985422111 223
Q ss_pred cccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhhH
Q 001838 875 QTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYF 954 (1007)
Q Consensus 875 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 954 (1007)
...||+.|+|||++.+..++.++||||+||++|||++|+.||...... .+.+.+... .+..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~--~~~~~~~~~---------~~~~-------- 215 (316)
T cd05620 155 TFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDED--ELFESIRVD---------TPHY-------- 215 (316)
T ss_pred ccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--HHHHHHHhC---------CCCC--------
Confidence 457999999999999889999999999999999999999999753211 111100000 0000
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCHH-HHH
Q 001838 955 AAKEQSLLSILNLATECTIESPGKRINAR-EIV 986 (1007)
Q Consensus 955 ~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~-evl 986 (1007)
+.....++.+++.+|++.||++||++. ++.
T Consensus 216 --~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 216 --PRWITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred --CCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 001234678999999999999999985 555
No 194
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.97 E-value=8.1e-32 Score=301.10 Aligned_cols=229 Identities=21% Similarity=0.256 Sum_probs=179.4
Q ss_pred cccccceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCC-CceeEEEEEEecCCeeEEEE
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRH-RNLVKIISACSNDDFKALIM 801 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H-~niv~l~~~~~~~~~~~lv~ 801 (1007)
+|...+.||+|+||+||+|+.. +++.||||++.... ....+.+..|++++..++| ++|+++++++.+.+..|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4778899999999999999876 57899999997642 2345678889999999975 56889999999999999999
Q ss_pred EecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCc
Q 001838 802 EYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQ 869 (1007)
Q Consensus 802 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~ 869 (1007)
||+++|+|.+++.... .+++..+..++.|++.||+|| |+.+|+|||++ ||+|||+++.......
T Consensus 81 E~~~~g~L~~~~~~~~-~~~~~~~~~~~~qi~~al~~l---H~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~ 156 (324)
T cd05587 81 EYVNGGDLMYHIQQVG-KFKEPHAVFYAAEIAIGLFFL---HSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGK 156 (324)
T ss_pred cCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCC
Confidence 9999999999987654 478889999999999999999 56799999764 8999999975422111
Q ss_pred ccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccc
Q 001838 870 LSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSG 949 (1007)
Q Consensus 870 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~ 949 (1007)
......||+.|+|||++.+..++.++||||+||++|||+||+.||...... .....+. .....
T Consensus 157 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~--~~~~~i~-----------~~~~~-- 219 (324)
T cd05587 157 --TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED--ELFQSIM-----------EHNVS-- 219 (324)
T ss_pred --ceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--HHHHHHH-----------cCCCC--
Confidence 123457999999999999889999999999999999999999999753211 1111110 00000
Q ss_pred hhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCH
Q 001838 950 EERYFAAKEQSLLSILNLATECTIESPGKRINA 982 (1007)
Q Consensus 950 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~ 982 (1007)
.+.....++.+++.+|++.||++||++
T Consensus 220 ------~~~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 220 ------YPKSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred ------CCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 001123467899999999999999986
No 195
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.97 E-value=2.9e-31 Score=294.52 Aligned_cols=254 Identities=22% Similarity=0.273 Sum_probs=190.9
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechh-hHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEe
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQR-YERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEY 803 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~ 803 (1007)
++|+..+.||+|+||.||+|... +|..||+|.++.. .....+++.+|++++++++||||++++++|.+++..++||||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 46888999999999999999865 5888999998654 234456788999999999999999999999999999999999
Q ss_pred cCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCccc
Q 001838 804 MPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLS 871 (1007)
Q Consensus 804 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~ 871 (1007)
+++|+|.+++... ..+++..+..++.|+++||.|||. ..+++|++++ |++|||+++.....
T Consensus 81 ~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~---- 153 (308)
T cd06615 81 MDGGSLDQVLKKA-GRIPENILGKISIAVLRGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---- 153 (308)
T ss_pred cCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh--hCCEEECCCChHHEEEecCCcEEEccCCCccccccc----
Confidence 9999999999765 347888899999999999999962 3589999763 89999998765322
Q ss_pred ccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcC----------------
Q 001838 872 MQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLP---------------- 935 (1007)
Q Consensus 872 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~---------------- 935 (1007)
......|+..|+|||++.+..++.++|||||||++|||++|+.||..... .....+......
T Consensus 154 ~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (308)
T cd06615 154 MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDA--KELEAMFGRPVSEGEAKESHRPVSGHPP 231 (308)
T ss_pred ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcch--hhHHHhhcCccccccccCCcccccCCCC
Confidence 12345689999999998888899999999999999999999999864321 111111111000
Q ss_pred -----ccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 001838 936 -----ISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLL 990 (1007)
Q Consensus 936 -----~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~ 990 (1007)
....+..+........ .. .......++.+++.+|+..+|++|||+.||++...
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~ 289 (308)
T cd06615 232 DSPRPMAIFELLDYIVNEPPP-KL-PSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPF 289 (308)
T ss_pred CccchhhHHHHHHHHhcCCCc-cC-cCcccCHHHHHHHHHHccCChhhCcCHHHHhcChh
Confidence 0001111110000000 00 00012346899999999999999999999998854
No 196
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=1.9e-31 Score=307.10 Aligned_cols=254 Identities=18% Similarity=0.195 Sum_probs=186.3
Q ss_pred cccccccceecccCceEEEEEEEc-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEe
Q 001838 725 TDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEY 803 (1007)
Q Consensus 725 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~ 803 (1007)
..+|...+.||+|+||.||+|... +++.||||.... ..+.+|++++++++|||||++++++..++..++||||
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~ 241 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK 241 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 346889999999999999999976 488999996432 3456899999999999999999999999999999999
Q ss_pred cCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCccc
Q 001838 804 MPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLS 871 (1007)
Q Consensus 804 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~ 871 (1007)
+. |+|.+++......+++.++.+++.|+++||+|| |+.+|+|||++ ||+|||+++.........
T Consensus 242 ~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yL---H~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~ 317 (461)
T PHA03211 242 YR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYI---HGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTP 317 (461)
T ss_pred cC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccccc
Confidence 95 799998876555689999999999999999999 57799999874 899999998764332222
Q ss_pred ccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccC------cchHHHHHHhhc------Cc---
Q 001838 872 MQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIG------ELSLSRWVNDLL------PI--- 936 (1007)
Q Consensus 872 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~------~~~l~~~~~~~~------~~--- 936 (1007)
......||+.|+|||++.+..++.++|||||||++|||++|..|+...... ...+.+.+.... +.
T Consensus 318 ~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~ 397 (461)
T PHA03211 318 FHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAG 397 (461)
T ss_pred cccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcc
Confidence 223457999999999999889999999999999999999988765432111 011222221110 00
Q ss_pred -cHHHHhhhhh----ccchhh-hHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 937 -SVMEVIDTNL----LSGEER-YFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 937 -~~~~~~d~~~----~~~~~~-~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
.......... ...... ..........++.+++.+||+.||++|||+.|++++
T Consensus 398 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 398 SRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred hHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 0000000000 000000 000001122368899999999999999999999875
No 197
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.97 E-value=7.2e-32 Score=291.43 Aligned_cols=227 Identities=24% Similarity=0.370 Sum_probs=177.3
Q ss_pred ceecccCceEEEEEEEcC--------CceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEe
Q 001838 732 NLLGIGSFGSVYVARLQD--------GMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEY 803 (1007)
Q Consensus 732 ~~ig~G~~g~Vy~~~~~~--------g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~ 803 (1007)
+.||+|+||.||+|.... ...||+|.+........+.+.+|+.++++++|||||++++++..++..++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 468999999999997642 235888988765555567889999999999999999999999998999999999
Q ss_pred cCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc--------------------ccceeeccee
Q 001838 804 MPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA--------------------HISDFSIAKF 863 (1007)
Q Consensus 804 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~--------------------kl~DFGla~~ 863 (1007)
+++|+|.+++......+++..+..++.||+.|++|| |+.+|+|||++ |++|||++..
T Consensus 81 ~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~ 157 (258)
T cd05078 81 VKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFL---EDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISIT 157 (258)
T ss_pred CCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCccceEEEecccccccCCCceEEecccccccc
Confidence 999999999987666689999999999999999999 67899998652 6888888765
Q ss_pred cCCCCcccccccccCCcccccccccccC-CCCchhhHHHHHHHHHHHHhCC-CCCCccccCcchHHHHHHhhcCccHHHH
Q 001838 864 LNGQDQLSMQTQTLATIGYMAPEYGVQG-RVSTRGDVYSYGIMLMETFTGK-KPTDEIFIGELSLSRWVNDLLPISVMEV 941 (1007)
Q Consensus 864 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvil~elltG~-~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 941 (1007)
.... ....+++.|+|||++... .++.++|||||||++|||++|. .|+....... .....
T Consensus 158 ~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~--~~~~~----------- 218 (258)
T cd05078 158 VLPK------EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQK--KLQFY----------- 218 (258)
T ss_pred cCCc------hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHH--HHHHH-----------
Confidence 4321 234578899999998764 5799999999999999999995 5554321100 00000
Q ss_pred hhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 001838 942 IDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGL 989 (1007)
Q Consensus 942 ~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L 989 (1007)
.... ..+.....++.+++.+||+.+|++|||++|+++.|
T Consensus 219 -~~~~--------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 219 -EDRH--------QLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred -Hccc--------cCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 0000 00001124688999999999999999999999986
No 198
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.97 E-value=3.1e-31 Score=286.31 Aligned_cols=234 Identities=22% Similarity=0.354 Sum_probs=182.0
Q ss_pred eecccCceEEEEEEEc---CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecCCC
Q 001838 733 LLGIGSFGSVYVARLQ---DGMEVAVKVFHQRY--ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNG 807 (1007)
Q Consensus 733 ~ig~G~~g~Vy~~~~~---~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~g 807 (1007)
.||+|+||+||+|.++ ++..||+|+++... ....+.+.+|+.++++++||||+++++++.. +..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA-ESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCcEEEEecCCCC
Confidence 5899999999999753 57889999986443 3445789999999999999999999998864 4678999999999
Q ss_pred ChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCccc-ccc
Q 001838 808 SLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLS-MQT 874 (1007)
Q Consensus 808 sL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~-~~~ 874 (1007)
+|.+++.... .+++..+.+++.|++.|++|| |+++|+|++++ ||+|||+++......... ...
T Consensus 81 ~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~l---H~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 156 (257)
T cd05116 81 PLNKFLQKNK-HVTEKNITELVHQVSMGMKYL---EETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKT 156 (257)
T ss_pred cHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecC
Confidence 9999997543 488999999999999999999 57789999764 899999998765332211 112
Q ss_pred cccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhh
Q 001838 875 QTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERY 953 (1007)
Q Consensus 875 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~ 953 (1007)
...++..|+|||.+....++.++|||||||++|||++ |+.||..... ....+.+.. ...
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--~~~~~~i~~------------~~~------ 216 (257)
T cd05116 157 HGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKG--NEVTQMIES------------GER------ 216 (257)
T ss_pred CCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHC------------CCC------
Confidence 2345678999999888889999999999999999998 9999975321 111111111 000
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 001838 954 FAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLK 991 (1007)
Q Consensus 954 ~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~ 991 (1007)
.+.+...+.++.+++.+||+.||++||++.+|.++|++
T Consensus 217 ~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 217 MECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred CCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 00011234568899999999999999999999999975
No 199
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.97 E-value=4.2e-32 Score=302.66 Aligned_cols=226 Identities=24% Similarity=0.330 Sum_probs=178.2
Q ss_pred ceecccCceEEEEEEE----cCCceEEEEEechhhH--HHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecC
Q 001838 732 NLLGIGSFGSVYVARL----QDGMEVAVKVFHQRYE--RALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMP 805 (1007)
Q Consensus 732 ~~ig~G~~g~Vy~~~~----~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~ 805 (1007)
+.||+|+||+||+++. .+|+.||+|+++.... .....+.+|++++++++||||+++++++.+++..|+||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999875 3588999999986532 234567789999999999999999999999999999999999
Q ss_pred CCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCccccc
Q 001838 806 NGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQ 873 (1007)
Q Consensus 806 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~~ 873 (1007)
+|+|.+++.+.. .+++..+..++.|++.||+|| |+.+|+|||++ ||+|||+++....... ..
T Consensus 82 ~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~--~~ 155 (318)
T cd05582 82 GGDLFTRLSKEV-MFTEEDVKFYLAELALALDHL---HSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK--KA 155 (318)
T ss_pred CCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCC--ce
Confidence 999999997643 488999999999999999999 57789999763 8999999986543211 12
Q ss_pred ccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhh
Q 001838 874 TQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERY 953 (1007)
Q Consensus 874 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~ 953 (1007)
....||+.|+|||++....++.++|||||||++|||++|+.||...... ...... ..... .
T Consensus 156 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~-----~~~~~i--------~~~~~----~-- 216 (318)
T cd05582 156 YSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRK-----ETMTMI--------LKAKL----G-- 216 (318)
T ss_pred ecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHH-----HHHHHH--------HcCCC----C--
Confidence 3457999999999998888999999999999999999999999753211 001000 00000 0
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 001838 954 FAAKEQSLLSILNLATECTIESPGKRINARE 984 (1007)
Q Consensus 954 ~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e 984 (1007)
.+.....++.+++.+||+.||++||++.+
T Consensus 217 --~p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 217 --MPQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred --CCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 00112346789999999999999999655
No 200
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.97 E-value=2.1e-31 Score=297.68 Aligned_cols=229 Identities=21% Similarity=0.277 Sum_probs=180.0
Q ss_pred cccccceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhc-CCCceeEEEEEEecCCeeEEEE
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRI-RHRNLVKIISACSNDDFKALIM 801 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 801 (1007)
+|...+.||+|+||+||+|+.. +++.||||+++... ....+.+..|..++..+ +|++|+++++++.+.+..|+||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4778899999999999999876 57899999997643 22345577788888887 5899999999999999999999
Q ss_pred EecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCc
Q 001838 802 EYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQ 869 (1007)
Q Consensus 802 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~ 869 (1007)
||+++|+|.+++.... .+++..+..++.|++.||+|| |+.+|+|||++ ||+|||+++.......
T Consensus 81 E~~~~g~L~~~~~~~~-~~~~~~~~~~~~qi~~aL~~L---H~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~ 156 (323)
T cd05616 81 EYVNGGDLMYQIQQVG-RFKEPHAVFYAAEIAIGLFFL---HSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGV 156 (323)
T ss_pred cCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCCC
Confidence 9999999999987654 488899999999999999999 56789999764 8999999986432211
Q ss_pred ccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccc
Q 001838 870 LSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSG 949 (1007)
Q Consensus 870 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~ 949 (1007)
......||+.|+|||++....++.++|||||||++|||+||+.||...... .+...+ ......
T Consensus 157 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~--~~~~~i-----------~~~~~~-- 219 (323)
T cd05616 157 --TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED--ELFQSI-----------MEHNVA-- 219 (323)
T ss_pred --ccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH--HHHHHH-----------HhCCCC--
Confidence 123457999999999999999999999999999999999999999753211 111111 000000
Q ss_pred hhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCH
Q 001838 950 EERYFAAKEQSLLSILNLATECTIESPGKRINA 982 (1007)
Q Consensus 950 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~ 982 (1007)
.+.....++.+++.+|++.+|++|+++
T Consensus 220 ------~p~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 220 ------YPKSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred ------CCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence 001123468899999999999999985
No 201
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.97 E-value=5.1e-31 Score=288.03 Aligned_cols=235 Identities=25% Similarity=0.350 Sum_probs=188.0
Q ss_pred cccccceecccCceEEEEEEEc-CCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEec
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYM 804 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~ 804 (1007)
.|+..+.||+|+||.||+|... ++..||||++.... ....+.+.+|++++++++||||+++++++.++...++||||+
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence 4777889999999999999875 58899999987543 344578899999999999999999999999999999999999
Q ss_pred CCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCcccc
Q 001838 805 PNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLSM 872 (1007)
Q Consensus 805 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~~~~ 872 (1007)
++|+|.+++..+ .+++.+...++.|++.|++|| |+.+++|+++ .+++|||++........ .
T Consensus 85 ~~~~L~~~i~~~--~l~~~~~~~~~~~l~~~l~~l---h~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~--~ 157 (277)
T cd06640 85 GGGSALDLLRAG--PFDEFQIATMLKEILKGLDYL---HSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI--K 157 (277)
T ss_pred CCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHH---HhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCcc--c
Confidence 999999998754 478889999999999999999 5778999865 47999999987643321 1
Q ss_pred cccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhh
Q 001838 873 QTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEER 952 (1007)
Q Consensus 873 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~ 952 (1007)
.....++..|+|||++.+..++.++|||||||++|||+||+.||........ . ..+....
T Consensus 158 ~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~-----~---------~~~~~~~------ 217 (277)
T cd06640 158 RNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRV-----L---------FLIPKNN------ 217 (277)
T ss_pred cccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhH-----h---------hhhhcCC------
Confidence 2234688899999999888899999999999999999999999875321110 0 0000000
Q ss_pred hHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 953 YFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 953 ~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
........+..+.+++.+||+.+|++||++.|+++.
T Consensus 218 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 218 PPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred CCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 000112234568899999999999999999999887
No 202
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.97 E-value=1.8e-31 Score=289.96 Aligned_cols=240 Identities=23% Similarity=0.274 Sum_probs=185.6
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEec
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYM 804 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~ 804 (1007)
++|...+.||+|+||.||+|+.. +++.||+|.++.........+.+|+.+++.++||||+++++++...+..|+||||+
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 88 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC 88 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence 46778889999999999999865 58999999987655444566889999999999999999999999999999999999
Q ss_pred CCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcccc
Q 001838 805 PNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSM 872 (1007)
Q Consensus 805 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~ 872 (1007)
++|+|.+++.... .+++.+...++.|++.|+.|| |+.+++|++++ ||+|||++....... ..
T Consensus 89 ~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~--~~ 162 (267)
T cd06645 89 GGGSLQDIYHVTG-PLSESQIAYVSRETLQGLYYL---HSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATI--AK 162 (267)
T ss_pred CCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCcc--cc
Confidence 9999999987544 588999999999999999999 56689998763 899999998664221 11
Q ss_pred cccccCCcccccccccc---cCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhh-cCccHHHHhhhhhcc
Q 001838 873 QTQTLATIGYMAPEYGV---QGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDL-LPISVMEVIDTNLLS 948 (1007)
Q Consensus 873 ~~~~~gt~~y~aPE~~~---~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~-~~~~~~~~~d~~~~~ 948 (1007)
.....|+..|+|||++. ...++.++|||||||++|||++|+.||........ ........ .+....
T Consensus 163 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~--------- 232 (267)
T cd06645 163 RKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA-LFLMTKSNFQPPKLK--------- 232 (267)
T ss_pred cccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhh-HHhhhccCCCCCccc---------
Confidence 23456899999999874 45688999999999999999999999864321110 00000000 000000
Q ss_pred chhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 949 GEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 949 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
........+.+++.+|++.+|++|||+.|++++
T Consensus 233 -------~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 233 -------DKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred -------ccCCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence 000112357899999999999999999998763
No 203
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.97 E-value=2e-31 Score=292.46 Aligned_cols=251 Identities=22% Similarity=0.297 Sum_probs=191.4
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEe
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEY 803 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~ 803 (1007)
++|+..+.||+|+||+||+|... +|+.||+|++.... ....+.+.+|+++++.++||||+++++++...+..++||||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 46778899999999999999865 58899999886543 34457889999999999999999999999999999999999
Q ss_pred cCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCccc
Q 001838 804 MPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLS 871 (1007)
Q Consensus 804 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~ 871 (1007)
+++|+|.+++.+.. .+++..+..++.+++.|+.||| +..+++|+++. +|+|||++.......
T Consensus 85 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH--~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~--- 158 (284)
T cd06620 85 MDCGSLDRIYKKGG-PIPVEILGKIAVAVVEGLTYLY--NVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI--- 158 (284)
T ss_pred CCCCCHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHH--HhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhc---
Confidence 99999999887643 4889999999999999999997 34579999663 899999987653211
Q ss_pred ccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchh
Q 001838 872 MQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEE 951 (1007)
Q Consensus 872 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~ 951 (1007)
.....|+..|+|||++....++.++|||||||++||++||+.||+.....+.. ...+....+.+.........
T Consensus 159 -~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~ 231 (284)
T cd06620 159 -ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDG------QDDPMGILDLLQQIVQEPPP 231 (284)
T ss_pred -cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhh------hhhhhHHHHHHHHHhhccCC
Confidence 12356899999999998888999999999999999999999999854321110 00000111111111100000
Q ss_pred hhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 001838 952 RYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLK 991 (1007)
Q Consensus 952 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~ 991 (1007)
.. .....+.++.+++.+|++.||++|||+.|++++..-
T Consensus 232 ~~--~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~ 269 (284)
T cd06620 232 RL--PSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPF 269 (284)
T ss_pred CC--CchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCccc
Confidence 00 011134568899999999999999999999987543
No 204
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.97 E-value=1.6e-31 Score=292.80 Aligned_cols=238 Identities=22% Similarity=0.304 Sum_probs=186.4
Q ss_pred ccccceecccCceEEEEEEEc-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecCC
Q 001838 728 FSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPN 806 (1007)
Q Consensus 728 ~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~ 806 (1007)
|+..+.||+|+||.||+|... ++..+|+|.+........+.+.+|++++++++||||++++++|..++..++||||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 566788999999999999976 4788999999766656667899999999999999999999999999999999999999
Q ss_pred CChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcccccc
Q 001838 807 GSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQT 874 (1007)
Q Consensus 807 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~~~ 874 (1007)
|+|..++.+....+++..+..++.|++.||.|| |+.+++|+++. |++|||+++...... ....
T Consensus 87 ~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~L---H~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~--~~~~ 161 (282)
T cd06643 87 GAVDAVMLELERPLTEPQIRVVCKQTLEALNYL---HENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI--QRRD 161 (282)
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeecCCCcccEEEccCCCEEEccccccccccccc--cccc
Confidence 999998876555689999999999999999999 56789999663 899999997653221 1123
Q ss_pred cccCCcccccccccc-----cCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccc
Q 001838 875 QTLATIGYMAPEYGV-----QGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSG 949 (1007)
Q Consensus 875 ~~~gt~~y~aPE~~~-----~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~ 949 (1007)
...|+..|+|||++. ...++.++|||||||++|||++|+.||......+ .......... +..
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~-~~~~~~~~~~---------~~~--- 228 (282)
T cd06643 162 SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMR-VLLKIAKSEP---------PTL--- 228 (282)
T ss_pred cccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHH-HHHHHhhcCC---------CCC---
Confidence 346899999999874 3457889999999999999999999987532111 0111110000 000
Q ss_pred hhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 950 EERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 950 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
..+.....++.+++.+||+.+|.+||++.+++++
T Consensus 229 -----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 262 (282)
T cd06643 229 -----AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQH 262 (282)
T ss_pred -----CCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0011123468899999999999999999998865
No 205
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.97 E-value=2.4e-31 Score=291.83 Aligned_cols=257 Identities=24% Similarity=0.404 Sum_probs=190.5
Q ss_pred cccccceecccCceEEEEEEEc-----CCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecC--CeeE
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQ-----DGMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVKIISACSND--DFKA 798 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~-----~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~ 798 (1007)
-|...+.||+|+||.||+|+.. ++..||+|.++... ....+.+.+|++++++++||||+++++++... ...+
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 84 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence 3677899999999999999742 47889999987543 34456799999999999999999999998875 5689
Q ss_pred EEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCC
Q 001838 799 LIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNG 866 (1007)
Q Consensus 799 lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~ 866 (1007)
+||||+++|+|.+++.+....+++..+..++.|++.||+|| |+.+++|+|++ |++|||+++....
T Consensus 85 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~l---H~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~ 161 (284)
T cd05079 85 LIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYL---GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIET 161 (284)
T ss_pred EEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH---HHCCeeecccchheEEEcCCCCEEECCCcccccccc
Confidence 99999999999999976655689999999999999999999 57899999764 8999999987653
Q ss_pred CCcc-cccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhh-cCccHHHHhhh
Q 001838 867 QDQL-SMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDL-LPISVMEVIDT 944 (1007)
Q Consensus 867 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~-~~~~~~~~~d~ 944 (1007)
.... .......++..|+|||++.+..++.++|||||||++|||+||+.|........ .+..... ........+..
T Consensus 162 ~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd05079 162 DKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLF---LKMIGPTHGQMTVTRLVRV 238 (284)
T ss_pred CccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchh---hhhcccccccccHHHHHHH
Confidence 3221 11223456778999999888889999999999999999999887754321100 0000000 00000000000
Q ss_pred hhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHH
Q 001838 945 NLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKI 992 (1007)
Q Consensus 945 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i 992 (1007)
+.... ..+.+...+.++.+++.+|++.+|++|||+.|+++.++++
T Consensus 239 -~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 239 -LEEGK--RLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred -HHcCc--cCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 00000 0000112345799999999999999999999999999876
No 206
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.97 E-value=3.3e-31 Score=291.90 Aligned_cols=240 Identities=23% Similarity=0.290 Sum_probs=188.8
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEec
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYM 804 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~ 804 (1007)
+.|+..+.||+|+||.||+|+.. +++.||+|++........+.+.+|++++++++||||+++++++..++..++||||+
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 91 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC 91 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence 56888999999999999999876 48999999998766666788999999999999999999999999999999999999
Q ss_pred CCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcccc
Q 001838 805 PNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSM 872 (1007)
Q Consensus 805 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~ 872 (1007)
++|+|..++.+....+++..+..++.|++.|++|| |+.+++|+++. ||+|||++....... ..
T Consensus 92 ~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~l---H~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~--~~ 166 (292)
T cd06644 92 PGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYL---HSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL--QR 166 (292)
T ss_pred CCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH---hcCCeeecCCCcceEEEcCCCCEEEccCccceeccccc--cc
Confidence 99999998876555689999999999999999999 67899999663 899999987643221 11
Q ss_pred cccccCCcccccccccc-----cCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhc
Q 001838 873 QTQTLATIGYMAPEYGV-----QGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLL 947 (1007)
Q Consensus 873 ~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~ 947 (1007)
.....+++.|+|||++. ...++.++|||||||++|||++|+.||...... .....+..... +
T Consensus 167 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-~~~~~~~~~~~---------~--- 233 (292)
T cd06644 167 RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM-RVLLKIAKSEP---------P--- 233 (292)
T ss_pred cceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHH-HHHHHHhcCCC---------c---
Confidence 13346888999999875 345788999999999999999999998653211 00111110000 0
Q ss_pred cchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 948 SGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 948 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
....+.....++.+++.+||+.+|++||++.|+++.
T Consensus 234 -----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 269 (292)
T cd06644 234 -----TLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEH 269 (292)
T ss_pred -----cCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 000011223468899999999999999999999874
No 207
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.97 E-value=1.2e-31 Score=299.65 Aligned_cols=225 Identities=24% Similarity=0.300 Sum_probs=174.5
Q ss_pred ceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHH-HHHhcCCCceeEEEEEEecCCeeEEEEEecCC
Q 001838 732 NLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECE-VMKRIRHRNLVKIISACSNDDFKALIMEYMPN 806 (1007)
Q Consensus 732 ~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~ 806 (1007)
+.||+|+||+||+|+.. +|+.||||++.... ....+.+..|.. +++.++||||+++++++.+.+..|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 46999999999999975 68999999997543 222344555554 56789999999999999999999999999999
Q ss_pred CChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcccccc
Q 001838 807 GSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQT 874 (1007)
Q Consensus 807 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~~~ 874 (1007)
|+|.+++.+.. .+++..+..++.||+.||+|| |+.+|+|||++ ||+|||+++...... ....
T Consensus 81 g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~l---H~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~--~~~~ 154 (323)
T cd05575 81 GELFFHLQRER-SFPEPRARFYAAEIASALGYL---HSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHS--KTTS 154 (323)
T ss_pred CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCC--Cccc
Confidence 99999987644 478888999999999999999 57789999764 899999998643221 1223
Q ss_pred cccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhhH
Q 001838 875 QTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYF 954 (1007)
Q Consensus 875 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 954 (1007)
...||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+..... ..... ..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~-----~~~~~~i--------~~~~~----~~-- 215 (323)
T cd05575 155 TFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDT-----AEMYDNI--------LNKPL----RL-- 215 (323)
T ss_pred cccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCH-----HHHHHHH--------HcCCC----CC--
Confidence 45799999999999988999999999999999999999999975321 1111110 00000 00
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 001838 955 AAKEQSLLSILNLATECTIESPGKRINAR 983 (1007)
Q Consensus 955 ~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~ 983 (1007)
......++.+++.+|++.||++||+++
T Consensus 216 --~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 216 --KPNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred --CCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 011234688999999999999999985
No 208
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.97 E-value=1.3e-31 Score=293.22 Aligned_cols=241 Identities=23% Similarity=0.322 Sum_probs=190.5
Q ss_pred cccccccceecccCceEEEEEEEc-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEe
Q 001838 725 TDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEY 803 (1007)
Q Consensus 725 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~ 803 (1007)
.++|+..+.||+|+||+||+|... ++..||+|+++.......+.+.+|++++++++||||+++++++..++..|+||||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF 83 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence 467888999999999999999875 6899999999866666667899999999999999999999999999999999999
Q ss_pred cCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCccc
Q 001838 804 MPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLS 871 (1007)
Q Consensus 804 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~ 871 (1007)
+++|+|.+++......+++..+.+++.|++.|+.|| |+.+|+|+++. +|+|||++........
T Consensus 84 ~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~l---h~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~-- 158 (280)
T cd06611 84 CDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFL---HSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQ-- 158 (280)
T ss_pred cCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCChhhEEECCCCCEEEccCccchhhccccc--
Confidence 999999999987655689999999999999999999 56789999763 7999999876532211
Q ss_pred ccccccCCcccccccccc-----cCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhh
Q 001838 872 MQTQTLATIGYMAPEYGV-----QGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNL 946 (1007)
Q Consensus 872 ~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~ 946 (1007)
......|++.|+|||++. ...++.++|||||||++|||++|+.||....... ....+....
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~------------- 224 (280)
T cd06611 159 KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMR-VLLKILKSE------------- 224 (280)
T ss_pred ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHH-HHHHHhcCC-------------
Confidence 123356899999999874 3457889999999999999999999987532110 111111000
Q ss_pred ccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 947 LSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 947 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
......+.....++.+++.+||+.+|++||++.++++.
T Consensus 225 ----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 225 ----PPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred ----CCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 00000111223468899999999999999999999876
No 209
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.97 E-value=5.3e-31 Score=288.31 Aligned_cols=246 Identities=24% Similarity=0.378 Sum_probs=192.4
Q ss_pred ccccccceecccCceEEEEEEEc-CCc----eEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGM----EVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKAL 799 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 799 (1007)
++|+..+.||+|+||+||+|..+ +|. .||+|.+.... ......+.+|+.++++++||||+++++++.. ...++
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 85 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL 85 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence 46788899999999999999865 333 58999887543 3445778999999999999999999999987 77899
Q ss_pred EEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCC
Q 001838 800 IMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQ 867 (1007)
Q Consensus 800 v~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~ 867 (1007)
||||+++|+|.+++......+++..+.+++.|++.|++|| |+.+++|+++. |++|||+++.....
T Consensus 86 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~L---H~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~ 162 (279)
T cd05057 86 ITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYL---EEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVD 162 (279)
T ss_pred EEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH---HhCCEEecccCcceEEEcCCCeEEECCCcccccccCc
Confidence 9999999999999987666689999999999999999999 56899999663 89999999876533
Q ss_pred CcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHHHHhhhhh
Q 001838 868 DQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNL 946 (1007)
Q Consensus 868 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~ 946 (1007)
..........++..|+|||.+....++.++|||||||++||+++ |+.||+..... .+...+....
T Consensus 163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~~------------ 228 (279)
T cd05057 163 EKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAV--EIPDLLEKGE------------ 228 (279)
T ss_pred ccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHH--HHHHHHhCCC------------
Confidence 22211122334678999999888889999999999999999999 99999753211 1111111100
Q ss_pred ccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHH
Q 001838 947 LSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKIRDT 995 (1007)
Q Consensus 947 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~~~ 995 (1007)
.. +.+..+..++.+++.+||..+|.+||++.++++.|.++...
T Consensus 229 ~~------~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05057 229 RL------PQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARD 271 (279)
T ss_pred CC------CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence 00 00011234578999999999999999999999999988654
No 210
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.97 E-value=4.8e-31 Score=285.37 Aligned_cols=240 Identities=25% Similarity=0.402 Sum_probs=187.8
Q ss_pred ccccccceecccCceEEEEEEEcCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecC
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMP 805 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~ 805 (1007)
++|...+.||+|+||.||+|....+..||+|++..... ..+.+.+|++++++++||||+++++++. .+..++||||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~ 83 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTM-MPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMG 83 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCc-cHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCC
Confidence 56888899999999999999988777899998865432 2356889999999999999999999875 456899999999
Q ss_pred CCChhHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcccc
Q 001838 806 NGSLENRLYSGT-CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSM 872 (1007)
Q Consensus 806 ~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~ 872 (1007)
+|+|.++++... ..+++..+..++.|++.|++|| |+.+++|+|+. ||+|||+++....... ..
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~l---H~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~-~~ 159 (260)
T cd05069 84 KGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYI---ERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEY-TA 159 (260)
T ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHH---HhCCEeecccCcceEEEcCCCeEEECCCccceEccCCcc-cc
Confidence 999999997543 3578999999999999999999 56789999763 8999999987643221 11
Q ss_pred cccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchh
Q 001838 873 QTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEE 951 (1007)
Q Consensus 873 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~ 951 (1007)
.....++..|+|||+.....++.++|||||||++|||+| |+.||.+.... ...++.....+.
T Consensus 160 ~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~~~~~~~~--------------- 222 (260)
T cd05069 160 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR--EVLEQVERGYRM--------------- 222 (260)
T ss_pred cCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCCC---------------
Confidence 123346778999999988889999999999999999999 89998753211 111111110000
Q ss_pred hhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 001838 952 RYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLK 991 (1007)
Q Consensus 952 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~ 991 (1007)
..+...+..+.+++.+||+.+|++||++++|.+.|++
T Consensus 223 ---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 223 ---PCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred ---CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 0011224568999999999999999999999999875
No 211
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.97 E-value=3.4e-31 Score=293.28 Aligned_cols=248 Identities=23% Similarity=0.381 Sum_probs=191.6
Q ss_pred ccccccceecccCceEEEEEEEc-CCc----eEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGM----EVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKAL 799 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 799 (1007)
++|+..+.||+|+||.||+|... +|. .||+|++.... .....++.+|+.++++++||||++++++|... ..++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~ 85 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQL 85 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Ccee
Confidence 46778899999999999999864 444 47899887543 33345788999999999999999999998765 4679
Q ss_pred EEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCC
Q 001838 800 IMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQ 867 (1007)
Q Consensus 800 v~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~ 867 (1007)
|+||+++|+|.+++......+++..+..++.|++.||+|| |+.+|+|++++ ||+|||+++.....
T Consensus 86 v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~L---H~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~ 162 (303)
T cd05110 86 VTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYL---EERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGD 162 (303)
T ss_pred eehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---hhcCeeccccccceeeecCCCceEEccccccccccCc
Confidence 9999999999999987666688999999999999999999 57889999763 89999999876533
Q ss_pred CcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHHHHhhhhh
Q 001838 868 DQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNL 946 (1007)
Q Consensus 868 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~ 946 (1007)
..........++..|+|||++....++.++|||||||++|||++ |+.||..... ....+++....
T Consensus 163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~--~~~~~~~~~~~------------ 228 (303)
T cd05110 163 EKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT--REIPDLLEKGE------------ 228 (303)
T ss_pred ccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHCCC------------
Confidence 22212223446778999999988889999999999999999997 9999875321 11122221100
Q ss_pred ccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHhh
Q 001838 947 LSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKIRDTLV 997 (1007)
Q Consensus 947 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~~~~~ 997 (1007)
... .+..+..++.+++.+||..+|++||+++|+++.++++.+...
T Consensus 229 ~~~------~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~~ 273 (303)
T cd05110 229 RLP------QPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDPQ 273 (303)
T ss_pred CCC------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhchh
Confidence 000 001123468899999999999999999999999999866543
No 212
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.97 E-value=2e-31 Score=303.91 Aligned_cols=255 Identities=20% Similarity=0.238 Sum_probs=185.5
Q ss_pred cccccceecccCceEEEEEEEc-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCC-----eeE
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY--ERALKSFQDECEVMKRIRHRNLVKIISACSNDD-----FKA 798 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-----~~~ 798 (1007)
+|+..+.||+|+||+||+|+.. +|+.||||++.... ....+++.+|+++++.++||||+++++++...+ ..|
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 4778899999999999999865 68999999986532 234467889999999999999999999998776 789
Q ss_pred EEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCC
Q 001838 799 LIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNG 866 (1007)
Q Consensus 799 lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~ 866 (1007)
+||||+. ++|.+++.... .+++..+..++.|++.||+|| |+.+|+|||++ ||+|||+++....
T Consensus 81 lv~e~~~-~~l~~~~~~~~-~l~~~~~~~~~~qi~~aL~~L---H~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~ 155 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSPQ-PLSSDHVKVFLYQILRGLKYL---HSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEP 155 (372)
T ss_pred EEeeccc-cCHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHH---HhCCeeCCCCChHHEEECCCCCEEeccccceeeccc
Confidence 9999997 58888876543 588999999999999999999 57799999764 8999999987643
Q ss_pred CCcccccccccCCcccccccccccC-CCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHH-----
Q 001838 867 QDQLSMQTQTLATIGYMAPEYGVQG-RVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVME----- 940 (1007)
Q Consensus 867 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~----- 940 (1007)
... .......+|+.|+|||++.+. .++.++|||||||++|||++|+.||....... .+.............+
T Consensus 156 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~g~~~~~~~~~~~ 233 (372)
T cd07853 156 DES-KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQ-QLDLITDLLGTPSLEAMRSAC 233 (372)
T ss_pred Ccc-ccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHH-HHHHHHHHcCCCCHHHHHHhh
Confidence 221 122345688999999998764 47999999999999999999999997532211 1111111111000000
Q ss_pred -----Hhhhhhccchh--hhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 941 -----VIDTNLLSGEE--RYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 941 -----~~d~~~~~~~~--~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
.+......... ...........++.+++.+|++.||++|||+.|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 234 EGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred HHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 00000000000 0000011124568899999999999999999999976
No 213
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.97 E-value=6.1e-31 Score=283.90 Aligned_cols=237 Identities=28% Similarity=0.451 Sum_probs=190.5
Q ss_pred ccccccceecccCceEEEEEEEcCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecC
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMP 805 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~ 805 (1007)
++|+..+.||+|+||.||+|... |+.||||.++.... ..+++.+|+.++++++|+||+++++++.+.+..++||||++
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 83 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMA 83 (256)
T ss_pred hhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecC
Confidence 46888899999999999999875 88999999986544 45789999999999999999999999999899999999999
Q ss_pred CCChhHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCcccc
Q 001838 806 NGSLENRLYSGT-CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLSM 872 (1007)
Q Consensus 806 ~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~~~~ 872 (1007)
+|+|.+++.... ..+++..+..++.|++.|+.|| |+.+++|+++ .||+|||.++......
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~l---h~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~---- 156 (256)
T cd05039 84 KGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYL---EEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ---- 156 (256)
T ss_pred CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH---HhCCccchhcccceEEEeCCCCEEEccccccccccccc----
Confidence 999999997643 3589999999999999999999 5788999865 3899999998763221
Q ss_pred cccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchh
Q 001838 873 QTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEE 951 (1007)
Q Consensus 873 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~ 951 (1007)
....++..|+|||++....++.++|||||||++|||++ |+.||......+ +...+. .....
T Consensus 157 -~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~~~~~------------~~~~~--- 218 (256)
T cd05039 157 -DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VVPHVE------------KGYRM--- 218 (256)
T ss_pred -ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHH--HHHHHh------------cCCCC---
Confidence 12335678999999988889999999999999999997 999987532111 111111 00000
Q ss_pred hhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHH
Q 001838 952 RYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKI 992 (1007)
Q Consensus 952 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i 992 (1007)
..+...+.++.+++.+||..+|++|||+.|++++|+.+
T Consensus 219 ---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 219 ---EAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred ---CCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 00112245688999999999999999999999999764
No 214
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.97 E-value=3.3e-31 Score=290.57 Aligned_cols=238 Identities=21% Similarity=0.308 Sum_probs=185.7
Q ss_pred ccccceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEe
Q 001838 728 FSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEY 803 (1007)
Q Consensus 728 ~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~ 803 (1007)
|+..+.||+|+||+||+|... +++.||||.+.... ....+.+.+|+.++++++|+||+++++++.+.+..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 667789999999999999865 68999999987542 22335677899999999999999999999999999999999
Q ss_pred cCCCChhHhhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcc
Q 001838 804 MPNGSLENRLYSG-TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQL 870 (1007)
Q Consensus 804 ~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~ 870 (1007)
+++|+|.+++... ...+++..+..++.|++.|+.|| |+.+|+|++++ +++|||++........
T Consensus 82 ~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~l---H~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~- 157 (285)
T cd05630 82 MNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDL---HQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT- 157 (285)
T ss_pred cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---HhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCcc-
Confidence 9999999988643 23588899999999999999999 57899999764 7999999987643221
Q ss_pred cccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccch
Q 001838 871 SMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGE 950 (1007)
Q Consensus 871 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~ 950 (1007)
.....|+..|+|||++.+..++.++|||||||++|||++|+.||....... ....+ ....+... .
T Consensus 158 --~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~-~~~~~---------~~~~~~~~-~-- 222 (285)
T cd05630 158 --IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI-KREEV---------ERLVKEVQ-E-- 222 (285)
T ss_pred --ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccc-hHHHH---------Hhhhhhhh-h--
Confidence 123468999999999998899999999999999999999999997532111 00000 00000000 0
Q ss_pred hhhHHHHHHHHHHHHHHHhhcCCCCCCCCCC-----HHHHHHH
Q 001838 951 ERYFAAKEQSLLSILNLATECTIESPGKRIN-----AREIVTG 988 (1007)
Q Consensus 951 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt-----~~evl~~ 988 (1007)
..+.....++.+++.+||+.||++||| +.|++++
T Consensus 223 ----~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h 261 (285)
T cd05630 223 ----EYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEH 261 (285)
T ss_pred ----hcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcC
Confidence 001112346789999999999999999 8888874
No 215
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-31 Score=319.71 Aligned_cols=245 Identities=28% Similarity=0.404 Sum_probs=196.1
Q ss_pred ccccccceecccCceEEEEEEEc----C----CceEEEEEechhh-HHHHHHHHHHHHHHHhc-CCCceeEEEEEEecCC
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ----D----GMEVAVKVFHQRY-ERALKSFQDECEVMKRI-RHRNLVKIISACSNDD 795 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~----~----g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~ 795 (1007)
++....+.+|+|+||.|++|... . ...||||.++... ....+.+..|+++|+.+ +|||||.++|+|..++
T Consensus 296 ~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~ 375 (609)
T KOG0200|consen 296 ENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDG 375 (609)
T ss_pred hhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCC
Confidence 34455569999999999999743 1 3579999998543 35568899999999999 5999999999999999
Q ss_pred eeEEEEEecCCCChhHhhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc-------
Q 001838 796 FKALIMEYMPNGSLENRLYSGT---------------CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------- 853 (1007)
Q Consensus 796 ~~~lv~E~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------- 853 (1007)
..++|+||++.|+|.++++..+ ..+...+.+.++.|||.||+|| ++.++||||+|
T Consensus 376 ~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L---~~~~~vHRDLAaRNVLi~ 452 (609)
T KOG0200|consen 376 PLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYL---ASVPCVHRDLAARNVLIT 452 (609)
T ss_pred ceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHH---hhCCccchhhhhhhEEec
Confidence 9999999999999999998765 3488889999999999999999 78889999875
Q ss_pred -----ccceeecceecCCCCccccccccc--CCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcch
Q 001838 854 -----HISDFSIAKFLNGQDQLSMQTQTL--ATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELS 925 (1007)
Q Consensus 854 -----kl~DFGla~~~~~~~~~~~~~~~~--gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~ 925 (1007)
||+|||+|+.....+.+... ... -...|||||.+....|+.|+|||||||++||++| |..||.+.... ..
T Consensus 453 ~~~~~kIaDFGlar~~~~~~~y~~~-~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~-~~ 530 (609)
T KOG0200|consen 453 KNKVIKIADFGLARDHYNKDYYRTK-SSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPT-EE 530 (609)
T ss_pred CCCEEEEccccceeccCCCCceEec-CCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcH-HH
Confidence 89999999977655444322 122 2456999999999999999999999999999998 89999763211 11
Q ss_pred HHHHHHhhcCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHH
Q 001838 926 LSRWVNDLLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKIR 993 (1007)
Q Consensus 926 l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~ 993 (1007)
+.++.+. ..+...+..+..+++++|..||+.+|++||++.|+++.++...
T Consensus 531 l~~~l~~------------------G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l 580 (609)
T KOG0200|consen 531 LLEFLKE------------------GNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHL 580 (609)
T ss_pred HHHHHhc------------------CCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHH
Confidence 1222211 1122334455778999999999999999999999999999854
No 216
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=99.97 E-value=7.9e-32 Score=299.74 Aligned_cols=183 Identities=26% Similarity=0.321 Sum_probs=160.1
Q ss_pred cccccceecccCceEEEEEEEc-CCceEEEEEechhhHHHHHHHHHHHHHHHhcC-C-----CceeEEEEEEecCCeeEE
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKSFQDECEVMKRIR-H-----RNLVKIISACSNDDFKAL 799 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H-----~niv~l~~~~~~~~~~~l 799 (1007)
+|.+.+.||+|+||.|.||... +++.||||+++... ....+...|+.+|..++ | -|+|++++||...++.||
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 7899999999999999999865 69999999998653 34466788999999997 5 389999999999999999
Q ss_pred EEEecCCCChhHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc--------------ccceeecceec
Q 001838 800 IMEYMPNGSLENRLYSGT-CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA--------------HISDFSIAKFL 864 (1007)
Q Consensus 800 v~E~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~--------------kl~DFGla~~~ 864 (1007)
|+|.++. +|+++++... ..++...+..++.||+.||.+| |..+|||+|++ ||+|||.|...
T Consensus 266 VfELL~~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L---~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~ 341 (586)
T KOG0667|consen 266 VFELLST-NLYELLKNNKFRGLSLPLVRKFAQQILTALLFL---HELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFE 341 (586)
T ss_pred eehhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeeccCChhheeeccCCcCceeEEeccccccc
Confidence 9999965 9999998654 4688999999999999999999 68899999875 99999999976
Q ss_pred CCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCcc
Q 001838 865 NGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEI 919 (1007)
Q Consensus 865 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~ 919 (1007)
... ....+-++.|+|||++.+.+|+.+.||||||||++||++|.+-|.+.
T Consensus 342 ~q~-----vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ 391 (586)
T KOG0667|consen 342 SQR-----VYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGD 391 (586)
T ss_pred CCc-----ceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCC
Confidence 432 12456788999999999999999999999999999999998877653
No 217
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.97 E-value=2.7e-31 Score=289.04 Aligned_cols=236 Identities=25% Similarity=0.411 Sum_probs=181.2
Q ss_pred ceecccCceEEEEEEEcC-Cc--eEEEEEechh-hHHHHHHHHHHHHHHHhc-CCCceeEEEEEEecCCeeEEEEEecCC
Q 001838 732 NLLGIGSFGSVYVARLQD-GM--EVAVKVFHQR-YERALKSFQDECEVMKRI-RHRNLVKIISACSNDDFKALIMEYMPN 806 (1007)
Q Consensus 732 ~~ig~G~~g~Vy~~~~~~-g~--~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~E~~~~ 806 (1007)
+.||+|+||.||+|+.++ |. .+|+|.++.. .....+.+.+|++++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 368999999999998754 43 5788988743 234456789999999999 799999999999999999999999999
Q ss_pred CChhHhhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceee
Q 001838 807 GSLENRLYSGT---------------CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFS 859 (1007)
Q Consensus 807 gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFG 859 (1007)
|+|.+++.... ..+++.++..++.|++.|++|| |+.+++|+|++ |++|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~l---H~~~i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHH---HHCCEeecccccceEEEcCCCeEEECCCC
Confidence 99999997432 2478899999999999999999 56899999764 799999
Q ss_pred cceecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccH
Q 001838 860 IAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISV 938 (1007)
Q Consensus 860 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~ 938 (1007)
+++..... ........+..|+|||++....++.++|||||||++|||++ |..||...... .....
T Consensus 158 l~~~~~~~---~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~-----~~~~~------ 223 (270)
T cd05047 158 LSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-----ELYEK------ 223 (270)
T ss_pred Cccccchh---hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHH-----HHHHH------
Confidence 98643211 11112234667999999988889999999999999999997 99998653211 11111
Q ss_pred HHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHH
Q 001838 939 MEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKIR 993 (1007)
Q Consensus 939 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~ 993 (1007)
+....... .+.....++.+++.+|++.+|.+|||+.|+++.|.++.
T Consensus 224 ---~~~~~~~~------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 224 ---LPQGYRLE------KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred ---HhCCCCCC------CCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 11100000 00112346889999999999999999999999998774
No 218
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.97 E-value=5.2e-31 Score=285.28 Aligned_cols=236 Identities=29% Similarity=0.473 Sum_probs=189.6
Q ss_pred ceecccCceEEEEEEEcC----CceEEEEEechhhHH-HHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecCC
Q 001838 732 NLLGIGSFGSVYVARLQD----GMEVAVKVFHQRYER-ALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPN 806 (1007)
Q Consensus 732 ~~ig~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~ 806 (1007)
+.||+|+||.||+|.... +..||||+++..... ..+.+.+|++++++++|+||+++++++......++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 468999999999998763 788999999865432 367889999999999999999999999999999999999999
Q ss_pred CChhHhhhcC--------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCC
Q 001838 807 GSLENRLYSG--------TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNG 866 (1007)
Q Consensus 807 gsL~~~l~~~--------~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~ 866 (1007)
|+|.+++... ...+++..+.+++.|++.|++|| |+.+++|+++ .|++|||.++....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~l---H~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYL---ASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHH---HcCCcccCccCcceEEECCCCcEEEccccccccccc
Confidence 9999999875 35689999999999999999999 6789999976 38999999998764
Q ss_pred CCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHHHHhhhh
Q 001838 867 QDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTN 945 (1007)
Q Consensus 867 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~ 945 (1007)
...........++..|+|||.+....++.++||||+||++|||++ |+.||..... ....+.... ..
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~~~~~~-----------~~ 224 (262)
T cd00192 158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN--EEVLEYLRK-----------GY 224 (262)
T ss_pred ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH--HHHHHHHHc-----------CC
Confidence 432222344567889999999888889999999999999999999 6999976411 111111110 00
Q ss_pred hccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 001838 946 LLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLL 990 (1007)
Q Consensus 946 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~ 990 (1007)
....+...+.++.+++.+|++.+|++|||+.|+++.|+
T Consensus 225 -------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 225 -------RLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred -------CCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 00011122457899999999999999999999999874
No 219
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.97 E-value=1.2e-31 Score=299.76 Aligned_cols=231 Identities=23% Similarity=0.303 Sum_probs=176.9
Q ss_pred ceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHH-HHHhcCCCceeEEEEEEecCCeeEEEEEecCC
Q 001838 732 NLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECE-VMKRIRHRNLVKIISACSNDDFKALIMEYMPN 806 (1007)
Q Consensus 732 ~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~ 806 (1007)
+.||+|+||+||+|+.. +|+.||||++.... ....+.+..|.. +++.++||||+++++++..++..|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 46999999999999865 68999999997542 223345556655 46778999999999999999999999999999
Q ss_pred CChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcccccc
Q 001838 807 GSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQT 874 (1007)
Q Consensus 807 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~~~ 874 (1007)
|+|..++.... .+++..+..++.||+.||+|| |+.+|+|||++ ||+|||+++...... ....
T Consensus 81 ~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~l---H~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~--~~~~ 154 (325)
T cd05604 81 GELFFHLQRER-SFPEPRARFYAAEIASALGYL---HSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQS--DTTT 154 (325)
T ss_pred CCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCC--CCcc
Confidence 99999887544 488899999999999999999 57899999774 899999998543221 1223
Q ss_pred cccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhhH
Q 001838 875 QTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYF 954 (1007)
Q Consensus 875 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 954 (1007)
...||+.|+|||++.+..++.++|||||||++|||++|+.||...... +..... ...... .
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~-----~~~~~~--------~~~~~~----~-- 215 (325)
T cd05604 155 TFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVA-----EMYDNI--------LHKPLV----L-- 215 (325)
T ss_pred cccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHH-----HHHHHH--------HcCCcc----C--
Confidence 457999999999999989999999999999999999999999753211 111110 000000 0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 001838 955 AAKEQSLLSILNLATECTIESPGKRINAREIVTGL 989 (1007)
Q Consensus 955 ~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L 989 (1007)
.+....++.+++.+|++.+|++||++++.++.+
T Consensus 216 --~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i 248 (325)
T cd05604 216 --RPGASLTAWSILEELLEKDRQRRLGAKEDFLEI 248 (325)
T ss_pred --CCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHH
Confidence 001234578999999999999999987544433
No 220
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.97 E-value=2.1e-31 Score=288.20 Aligned_cols=240 Identities=23% Similarity=0.369 Sum_probs=188.8
Q ss_pred ccccccceecccCceEEEEEEEcCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecC
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMP 805 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~ 805 (1007)
++|...++||+|+||.||+|..++++.||+|.+..... ..+.+.+|+.++++++||||+++++++. .+..++||||++
T Consensus 6 ~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~ 83 (260)
T cd05067 6 ETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYME 83 (260)
T ss_pred HHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcCC
Confidence 56888999999999999999988899999999875432 2357889999999999999999999874 456899999999
Q ss_pred CCChhHhhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcccc
Q 001838 806 NGSLENRLYSG-TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSM 872 (1007)
Q Consensus 806 ~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~ 872 (1007)
+|+|.+++... ...+++.++..++.|++.||+|| |+.+++|+++. +++|||+++....... ..
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~L---H~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~-~~ 159 (260)
T cd05067 84 NGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFI---ERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEY-TA 159 (260)
T ss_pred CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH---hcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCc-cc
Confidence 99999998753 34688999999999999999999 57889999763 8999999987652221 11
Q ss_pred cccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchh
Q 001838 873 QTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEE 951 (1007)
Q Consensus 873 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~ 951 (1007)
.....++..|+|||++....++.++|||||||++||+++ |+.||...... ......... ...
T Consensus 160 ~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~------------~~~--- 222 (260)
T cd05067 160 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP--EVIQNLERG------------YRM--- 222 (260)
T ss_pred ccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH--HHHHHHHcC------------CCC---
Confidence 223346778999999988889999999999999999999 99999753211 111111100 000
Q ss_pred hhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 001838 952 RYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLK 991 (1007)
Q Consensus 952 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~ 991 (1007)
+.+...+.++.+++.+|+..+|++|||+.++.+.|+.
T Consensus 223 ---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 223 ---PRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred ---CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 0011123468999999999999999999999999874
No 221
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=1.4e-31 Score=306.73 Aligned_cols=254 Identities=20% Similarity=0.185 Sum_probs=186.7
Q ss_pred cccccccceecccCceEEEEEEEc---CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEE
Q 001838 725 TDRFSKNNLLGIGSFGSVYVARLQ---DGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIM 801 (1007)
Q Consensus 725 ~~~~~~~~~ig~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 801 (1007)
..+|...+.||+|+||.||+|... .+..||||.+... +.+.+|++++++++|||||++++++...+..++||
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 165 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM 165 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence 357999999999999999999753 3678999988653 23567999999999999999999999999999999
Q ss_pred EecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCc
Q 001838 802 EYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQ 869 (1007)
Q Consensus 802 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~ 869 (1007)
||+. ++|.+++.. ...+++..+..++.|++.||+|| |+.+|+|||++ ||+|||+++.......
T Consensus 166 e~~~-~~l~~~l~~-~~~l~~~~~~~i~~ql~~aL~~L---H~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~ 240 (392)
T PHA03207 166 PKYK-CDLFTYVDR-SGPLPLEQAITIQRRLLEALAYL---HGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPD 240 (392)
T ss_pred hhcC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHH---HHCCccccCCCHHHEEEcCCCCEEEccCccccccCcccc
Confidence 9996 688888844 34589999999999999999999 56789999864 8999999987654332
Q ss_pred ccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCc--chHHHHHHhhc------Cc----c
Q 001838 870 LSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGE--LSLSRWVNDLL------PI----S 937 (1007)
Q Consensus 870 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~--~~l~~~~~~~~------~~----~ 937 (1007)
........||+.|+|||++....|+.++|||||||++|||++|+.||....... ..+...+.... +. .
T Consensus 241 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~ 320 (392)
T PHA03207 241 TPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTN 320 (392)
T ss_pred cccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchh
Confidence 222234579999999999998899999999999999999999999997543221 11111111111 00 0
Q ss_pred HHHHhhhhhc---cchhh-hHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 938 VMEVIDTNLL---SGEER-YFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 938 ~~~~~d~~~~---~~~~~-~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
..+.+..... ..... ..-.......++.+++.+|++.||++|||+.|++.+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 321 LCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred HHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0001100000 00000 000001123467889999999999999999999986
No 222
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.97 E-value=2.4e-31 Score=298.71 Aligned_cols=246 Identities=27% Similarity=0.410 Sum_probs=190.8
Q ss_pred ccccccceecccCceEEEEEEEc--------CCceEEEEEechhh-HHHHHHHHHHHHHHHhc-CCCceeEEEEEEecCC
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ--------DGMEVAVKVFHQRY-ERALKSFQDECEVMKRI-RHRNLVKIISACSNDD 795 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~--------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~ 795 (1007)
.+|...+.||+|+||.||+|+.. .+..||+|.++... ....+++.+|+++++++ +||||++++++|...+
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 91 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence 46888999999999999999742 12369999887532 34457889999999999 7999999999999999
Q ss_pred eeEEEEEecCCCChhHhhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc-------
Q 001838 796 FKALIMEYMPNGSLENRLYSGT---------------CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------- 853 (1007)
Q Consensus 796 ~~~lv~E~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------- 853 (1007)
..++||||+++|+|.+++.+.. ..+++.++..++.|++.||+|| |+.+|+|++++
T Consensus 92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~L---H~~givH~dlkp~Nill~ 168 (334)
T cd05100 92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYL---ASQKCIHRDLAARNVLVT 168 (334)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHH---HHCCeeccccccceEEEc
Confidence 9999999999999999987431 2478889999999999999999 57899999763
Q ss_pred -----ccceeecceecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHH
Q 001838 854 -----HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLS 927 (1007)
Q Consensus 854 -----kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~ 927 (1007)
||+|||+++...............++..|+|||++....++.++|||||||++|||++ |..||.... ..
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~-----~~ 243 (334)
T cd05100 169 EDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP-----VE 243 (334)
T ss_pred CCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCC-----HH
Confidence 8999999987643322222223345678999999988889999999999999999998 888886532 11
Q ss_pred HHHHhhcCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHH
Q 001838 928 RWVNDLLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKIRD 994 (1007)
Q Consensus 928 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~~ 994 (1007)
++....... .... .+...+.++.+++.+|++.+|++|||+.|+++.|+++..
T Consensus 244 ~~~~~~~~~---------~~~~------~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~ 295 (334)
T cd05100 244 ELFKLLKEG---------HRMD------KPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLT 295 (334)
T ss_pred HHHHHHHcC---------CCCC------CCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhh
Confidence 111111000 0000 011123468899999999999999999999999999874
No 223
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.97 E-value=4.1e-31 Score=291.67 Aligned_cols=238 Identities=23% Similarity=0.316 Sum_probs=188.8
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEec
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYM 804 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~ 804 (1007)
.+|...+.||+|+||.||+|... +++.||+|.+........+.+.+|+.+++.++||||++++++|..++..|+||||+
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 98 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 98 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeeccc
Confidence 57888999999999999999864 69999999997654444567889999999999999999999999999999999999
Q ss_pred CCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCcccc
Q 001838 805 PNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLSM 872 (1007)
Q Consensus 805 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~~~~ 872 (1007)
++|+|.+++.+. .+++.++..++.|++.||.|| |+.+++|+++ ++++|||++.........
T Consensus 99 ~~~~L~~~~~~~--~~~~~~~~~~~~~l~~~L~~L---H~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~-- 171 (297)
T cd06656 99 AGGSLTDVVTET--CMDEGQIAAVCRECLQALDFL---HSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK-- 171 (297)
T ss_pred CCCCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCccC--
Confidence 999999998654 378889999999999999999 5678999965 389999999876433211
Q ss_pred cccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhh
Q 001838 873 QTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEER 952 (1007)
Q Consensus 873 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~ 952 (1007)
.....|++.|+|||...+..++.++|||||||++|||++|+.||............+... .+
T Consensus 172 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~-~~----------------- 233 (297)
T cd06656 172 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNG-TP----------------- 233 (297)
T ss_pred cCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCC-CC-----------------
Confidence 133468899999999988889999999999999999999999997532111100000000 00
Q ss_pred hHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 953 YFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 953 ~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
....+......+.+++.+||+.+|++||++.|+++.
T Consensus 234 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (297)
T cd06656 234 ELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQH 269 (297)
T ss_pred CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000011223457889999999999999999999984
No 224
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.97 E-value=8.7e-31 Score=283.94 Aligned_cols=240 Identities=24% Similarity=0.318 Sum_probs=187.3
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhh-----HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY-----ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKAL 799 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 799 (1007)
++|...+.||+|++|.||+|... +++.||+|.+.... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 56888999999999999999865 68999999886432 2234678899999999999999999999999999999
Q ss_pred EEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCC
Q 001838 800 IMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQ 867 (1007)
Q Consensus 800 v~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~ 867 (1007)
||||+++++|.+++.... .+++..+.+++.|++.|+.|| |+.+|+|+++ .+|+|||+++.....
T Consensus 82 v~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~l~~l---H~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~ 157 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYG-ALTETVTRKYTRQILEGVEYL---HSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTI 157 (263)
T ss_pred EEEECCCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEcCCCCEEEeecccceecccc
Confidence 999999999999987654 478888899999999999999 5779999976 389999999876432
Q ss_pred Cccc-ccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhh
Q 001838 868 DQLS-MQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNL 946 (1007)
Q Consensus 868 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~ 946 (1007)
.... ......|+..|+|||++.+..++.++||||+||++|||++|+.||...... ........ ...
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--~~~~~~~~-----------~~~ 224 (263)
T cd06625 158 CSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAM--AAIFKIAT-----------QPT 224 (263)
T ss_pred ccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchH--HHHHHHhc-----------cCC
Confidence 1111 112346788999999999888999999999999999999999998653110 00000000 000
Q ss_pred ccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 947 LSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 947 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
. ...+......+.+++.+||..+|++|||+.|+++.
T Consensus 225 ---~---~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 225 ---N---PQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred ---C---CCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 0 00011223468899999999999999999999874
No 225
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.97 E-value=3.1e-31 Score=297.01 Aligned_cols=243 Identities=18% Similarity=0.248 Sum_probs=183.1
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIM 801 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 801 (1007)
++|...+.||+|+||+||+|+.. +++.||||++.+.. ....+.+.+|+.++..++||||+++++++.+++..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 46888999999999999999965 58999999997532 233466889999999999999999999999999999999
Q ss_pred EecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCc
Q 001838 802 EYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQ 869 (1007)
Q Consensus 802 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~ 869 (1007)
||+++|+|.+++.+....+++..+..++.||+.||+|| |+.+|+|||++ ||+|||+++.......
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 157 (331)
T cd05597 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSV---HQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGT 157 (331)
T ss_pred ecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH---HhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCC
Confidence 99999999999976555688889999999999999999 67899999764 8999999987643221
Q ss_pred ccccccccCCccccccccccc-----CCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhh
Q 001838 870 LSMQTQTLATIGYMAPEYGVQ-----GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDT 944 (1007)
Q Consensus 870 ~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~ 944 (1007)
. ......||+.|+|||++.. ..++.++|||||||++|||++|+.||..... .+......... .
T Consensus 158 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~-----~~~~~~i~~~~------~ 225 (331)
T cd05597 158 V-QSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL-----VETYGKIMNHK------E 225 (331)
T ss_pred c-cccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCH-----HHHHHHHHcCC------C
Confidence 1 1123469999999999863 4578899999999999999999999975321 11111100000 0
Q ss_pred hhccchhhhHHHHHHHHHHHHHHHhhcCCCCC--CCCCCHHHHHHH
Q 001838 945 NLLSGEERYFAAKEQSLLSILNLATECTIESP--GKRINAREIVTG 988 (1007)
Q Consensus 945 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p--~~Rpt~~evl~~ 988 (1007)
... ........+.++.+++.+|+..++ ..||++.+++++
T Consensus 226 ~~~-----~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 226 HFQ-----FPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred ccc-----CCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 000 000001123457778877765433 348899999887
No 226
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.97 E-value=6.6e-31 Score=287.41 Aligned_cols=238 Identities=23% Similarity=0.255 Sum_probs=184.5
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechh-hHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEe
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQR-YERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEY 803 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~ 803 (1007)
++|+..+.||+|+||+||+|... +++.||+|++... .....+++.+|++++++++||||+++++++..++..++||||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 80 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF 80 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence 35778899999999999999864 6889999998643 234456789999999999999999999999999999999999
Q ss_pred cCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCccc
Q 001838 804 MPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLS 871 (1007)
Q Consensus 804 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~ 871 (1007)
+++|+|..+. .+++..+..++.|++.|++|| |+.+|+|+++. ||+|||++.......
T Consensus 81 ~~~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~--- 149 (279)
T cd06619 81 MDGGSLDVYR-----KIPEHVLGRIAVAVVKGLTYL---WSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI--- 149 (279)
T ss_pred CCCCChHHhh-----cCCHHHHHHHHHHHHHHHHHH---HHCCEeeCCCCHHHEEECCCCCEEEeeCCcceeccccc---
Confidence 9999997643 367888889999999999999 57899999763 899999998764321
Q ss_pred ccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcch--HHHHHHhhcCccHHHHhhhhhccc
Q 001838 872 MQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELS--LSRWVNDLLPISVMEVIDTNLLSG 949 (1007)
Q Consensus 872 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~--l~~~~~~~~~~~~~~~~d~~~~~~ 949 (1007)
.....||..|+|||++.+..++.++|||||||++|||++|+.||......... ...+. +.+.......
T Consensus 150 -~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 219 (279)
T cd06619 150 -AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLL---------QCIVDEDPPV 219 (279)
T ss_pred -ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHH---------HHHhccCCCC
Confidence 23457899999999999888999999999999999999999999753221110 01111 0100000000
Q ss_pred hhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 001838 950 EERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGL 989 (1007)
Q Consensus 950 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L 989 (1007)
. .......++.+++.+|++.+|++||++.|+++.-
T Consensus 220 ~-----~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~ 254 (279)
T cd06619 220 L-----PVGQFSEKFVHFITQCMRKQPKERPAPENLMDHP 254 (279)
T ss_pred C-----CCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCc
Confidence 0 0011234688999999999999999999998763
No 227
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.97 E-value=7.9e-31 Score=284.08 Aligned_cols=243 Identities=23% Similarity=0.298 Sum_probs=191.7
Q ss_pred cccccccceecccCceEEEEEEEc-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEe
Q 001838 725 TDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEY 803 (1007)
Q Consensus 725 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~ 803 (1007)
.++|...+.||+|+||.||+|... +++.+|+|++........+.+.+|++++++++||||+++++++.+.+..|+||||
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~ 81 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY 81 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence 367888999999999999999875 5788999999866555567899999999999999999999999999999999999
Q ss_pred cCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCccc
Q 001838 804 MPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLS 871 (1007)
Q Consensus 804 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~ 871 (1007)
+++++|.+++......++...+..++.|++.|++|| |+.+|+|+++. |++|||++....... .
T Consensus 82 ~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~l---h~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~--~ 156 (262)
T cd06613 82 CGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYL---HETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATI--A 156 (262)
T ss_pred CCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHH---HhCCceecCCChhhEEECCCCCEEECccccchhhhhhh--h
Confidence 999999999987645688999999999999999999 56789999663 899999998764321 1
Q ss_pred ccccccCCcccccccccccC---CCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhcc
Q 001838 872 MQTQTLATIGYMAPEYGVQG---RVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLS 948 (1007)
Q Consensus 872 ~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~ 948 (1007)
......++..|+|||.+... .++.++|||||||++|||+||+.||......... ...... ...+
T Consensus 157 ~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~-~~~~~~--------~~~~---- 223 (262)
T cd06613 157 KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRAL-FLISKS--------NFPP---- 223 (262)
T ss_pred ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHhc--------cCCC----
Confidence 12335688899999998776 7899999999999999999999999753211110 000000 0000
Q ss_pred chhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 949 GEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 949 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
.........+.++.+++.+||+.+|.+|||+.||+.+
T Consensus 224 ---~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 260 (262)
T cd06613 224 ---PKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQH 260 (262)
T ss_pred ---ccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000112234568999999999999999999999753
No 228
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.97 E-value=1.2e-31 Score=304.17 Aligned_cols=190 Identities=23% Similarity=0.358 Sum_probs=161.4
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIM 801 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 801 (1007)
++|+..+.||+|+||+||+|+.. +++.||||+++... ....+.+.+|+.++.+++||||+++++++.+.+..|+||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46888999999999999999876 58999999997543 234567888999999999999999999999999999999
Q ss_pred EecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCc
Q 001838 802 EYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQ 869 (1007)
Q Consensus 802 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~ 869 (1007)
|||++|+|.+++.+.. .+++..+..++.|++.||+|| |+.+|+|||++ ||+|||+++.......
T Consensus 81 E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~~L~~l---H~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~ 156 (360)
T cd05627 81 EFLPGGDMMTLLMKKD-TLSEEATQFYIAETVLAIDAI---HQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHR 156 (360)
T ss_pred eCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccc
Confidence 9999999999997654 478888999999999999999 57899999764 8999999875432110
Q ss_pred c---------------------------------cccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCC
Q 001838 870 L---------------------------------SMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPT 916 (1007)
Q Consensus 870 ~---------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~ 916 (1007)
. ......+||+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf 236 (360)
T cd05627 157 TEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPF 236 (360)
T ss_pred cccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCC
Confidence 0 0012346999999999999999999999999999999999999999
Q ss_pred Ccc
Q 001838 917 DEI 919 (1007)
Q Consensus 917 ~~~ 919 (1007)
...
T Consensus 237 ~~~ 239 (360)
T cd05627 237 CSE 239 (360)
T ss_pred CCC
Confidence 753
No 229
>PTZ00284 protein kinase; Provisional
Probab=99.97 E-value=7.7e-31 Score=307.65 Aligned_cols=260 Identities=21% Similarity=0.213 Sum_probs=183.7
Q ss_pred HHHHHhcccccccceecccCceEEEEEEEc-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCC------CceeEEEEEE
Q 001838 719 HELLQATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKSFQDECEVMKRIRH------RNLVKIISAC 791 (1007)
Q Consensus 719 ~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H------~niv~l~~~~ 791 (1007)
+++...+++|...+.||+|+||+||+|... +++.||||+++... ...+.+..|++++++++| +++++++++|
T Consensus 122 ~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~ 200 (467)
T PTZ00284 122 EDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYF 200 (467)
T ss_pred CccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEE
Confidence 344556789999999999999999999865 58899999996432 223455667777777754 4589999998
Q ss_pred ecC-CeeEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------------
Q 001838 792 SND-DFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------------ 852 (1007)
Q Consensus 792 ~~~-~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------------ 852 (1007)
... ++.|+|||++ +++|.+++.+.. .+++..+..|+.||+.||+||| +..+|||||+
T Consensus 201 ~~~~~~~~iv~~~~-g~~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~yLH--~~~gIiHrDlKP~NILl~~~~~~~~~~~ 276 (467)
T PTZ00284 201 QNETGHMCIVMPKY-GPCLLDWIMKHG-PFSHRHLAQIIFQTGVALDYFH--TELHLMHTDLKPENILMETSDTVVDPVT 276 (467)
T ss_pred EcCCceEEEEEecc-CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH--hcCCeecCCCCHHHEEEecCCccccccc
Confidence 764 5789999998 678998887653 5889999999999999999996 2368999963
Q ss_pred ----------cccceeecceecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccC
Q 001838 853 ----------AHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIG 922 (1007)
Q Consensus 853 ----------~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~ 922 (1007)
.||+|||.+..... .....+||+.|+|||++.+..|+.++|||||||++|||++|+.||+.....
T Consensus 277 ~~~~~~~~~~vkl~DfG~~~~~~~-----~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~ 351 (467)
T PTZ00284 277 NRALPPDPCRVRICDLGGCCDERH-----SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNL 351 (467)
T ss_pred ccccCCCCceEEECCCCccccCcc-----ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH
Confidence 47899998864321 123467999999999999999999999999999999999999999753211
Q ss_pred c-chHH---------HHHHhhcCccHHHHhhhhhc--cc-hhh--------hHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 001838 923 E-LSLS---------RWVNDLLPISVMEVIDTNLL--SG-EER--------YFAAKEQSLLSILNLATECTIESPGKRIN 981 (1007)
Q Consensus 923 ~-~~l~---------~~~~~~~~~~~~~~~d~~~~--~~-~~~--------~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt 981 (1007)
+ .... .|..........+.++.... .. ... ...........+.+|+.+||++||++|||
T Consensus 352 ~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t 431 (467)
T PTZ00284 352 EHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLN 431 (467)
T ss_pred HHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCC
Confidence 1 0000 11111000011111111000 00 000 00000011245789999999999999999
Q ss_pred HHHHHHH
Q 001838 982 AREIVTG 988 (1007)
Q Consensus 982 ~~evl~~ 988 (1007)
++|++++
T Consensus 432 a~e~L~H 438 (467)
T PTZ00284 432 ARQMTTH 438 (467)
T ss_pred HHHHhcC
Confidence 9999985
No 230
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.97 E-value=2.9e-31 Score=285.46 Aligned_cols=236 Identities=31% Similarity=0.433 Sum_probs=185.5
Q ss_pred ceecccCceEEEEEEEcCCceEEEEEechhhH-HHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecCCCChh
Q 001838 732 NLLGIGSFGSVYVARLQDGMEVAVKVFHQRYE-RALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLE 810 (1007)
Q Consensus 732 ~~ig~G~~g~Vy~~~~~~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~gsL~ 810 (1007)
+.||+|+||.||+|...+++.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++||||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 46899999999999987799999999875432 34578999999999999999999999999999999999999999999
Q ss_pred HhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCcccccccccC
Q 001838 811 NRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLSMQTQTLA 878 (1007)
Q Consensus 811 ~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~~~~~~~~~g 878 (1007)
+++.+....+++..+..++.+++.|++|| |+.+++|+++ .|++|||+++...............+
T Consensus 81 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~l---H~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ 157 (251)
T cd05041 81 TFLRKKKNRLTVKKLLQMSLDAAAGMEYL---ESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQI 157 (251)
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcc
Confidence 99976555688999999999999999999 6778999975 38999999986542211111112234
Q ss_pred CcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhhHHHH
Q 001838 879 TIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYFAAK 957 (1007)
Q Consensus 879 t~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 957 (1007)
+..|+|||++.++.++.++|||||||++|||+| |..||...... ..... +...... ..+
T Consensus 158 ~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~--~~~~~------------~~~~~~~------~~~ 217 (251)
T cd05041 158 PIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ--QTRER------------IESGYRM------PAP 217 (251)
T ss_pred eeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH--HHHHH------------HhcCCCC------CCC
Confidence 667999999988889999999999999999999 88888653211 11111 1100000 001
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 001838 958 EQSLLSILNLATECTIESPGKRINAREIVTGLL 990 (1007)
Q Consensus 958 ~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~ 990 (1007)
...+.++.+++.+|++.+|++|||+.|+++.|+
T Consensus 218 ~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 218 QLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred ccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 122456899999999999999999999999886
No 231
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.97 E-value=5.3e-31 Score=284.40 Aligned_cols=239 Identities=23% Similarity=0.416 Sum_probs=187.8
Q ss_pred ccccccceecccCceEEEEEEEcCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecC
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMP 805 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~ 805 (1007)
.+|+..+.||+|+||.||+|...++..+|+|++..... ...+|.+|++++++++||||+++++++......++||||++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 82 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM-SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME 82 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC-CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence 46778899999999999999887788999999875422 12568899999999999999999999999999999999999
Q ss_pred CCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCccccc
Q 001838 806 NGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLSMQ 873 (1007)
Q Consensus 806 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~~~~~ 873 (1007)
+|+|.+++......+++..+..++.|++.|++|| |+.+++|+++ .||+|||+++...... ....
T Consensus 83 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l---H~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-~~~~ 158 (256)
T cd05112 83 HGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYL---ESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQ-YTSS 158 (256)
T ss_pred CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHH---HHCCccccccccceEEEcCCCeEEECCCcceeecccCc-cccc
Confidence 9999999987655688999999999999999999 5678999865 3899999998654221 1111
Q ss_pred ccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhh
Q 001838 874 TQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEER 952 (1007)
Q Consensus 874 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~ 952 (1007)
....++.+|+|||++....++.++|||||||++|||++ |+.||...... ...... .........
T Consensus 159 ~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~-----~~~~~~---------~~~~~~~~~- 223 (256)
T cd05112 159 TGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNS-----EVVETI---------NAGFRLYKP- 223 (256)
T ss_pred CCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHH-----HHHHHH---------hCCCCCCCC-
Confidence 23345678999999988889999999999999999998 99998753211 111111 000000000
Q ss_pred hHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 001838 953 YFAAKEQSLLSILNLATECTIESPGKRINAREIVTGL 989 (1007)
Q Consensus 953 ~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L 989 (1007)
...+.++.+++.+||+.+|++|||+.|++++|
T Consensus 224 -----~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 224 -----RLASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred -----CCCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 01134689999999999999999999999987
No 232
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.97 E-value=3.7e-31 Score=290.67 Aligned_cols=240 Identities=22% Similarity=0.301 Sum_probs=187.0
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechh-hHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEe
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQR-YERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEY 803 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~ 803 (1007)
++|+..+.||+|+||+||+|... +|+.||+|.++.. .....+.+.+|++++++++||||+++++++...+..|+||||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 36788899999999999999976 6899999988753 234456789999999999999999999999999999999999
Q ss_pred cCCCChhHhhhcC--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCc
Q 001838 804 MPNGSLENRLYSG--TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQ 869 (1007)
Q Consensus 804 ~~~gsL~~~l~~~--~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~ 869 (1007)
+++++|.+++... ...+++..+..++.|++.|+.||| ++.+|+|++++ |++|||+++......
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH--~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~- 157 (286)
T cd06622 81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLK--EEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASL- 157 (286)
T ss_pred cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHH--hcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCc-
Confidence 9999999998764 235899999999999999999996 34689999764 899999998653221
Q ss_pred ccccccccCCcccccccccccC------CCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhh
Q 001838 870 LSMQTQTLATIGYMAPEYGVQG------RVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVID 943 (1007)
Q Consensus 870 ~~~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d 943 (1007)
.....|++.|+|||++... .++.++|||||||++|||++|+.||....... +... .....+
T Consensus 158 ---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-----~~~~-----~~~~~~ 224 (286)
T cd06622 158 ---AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYAN-----IFAQ-----LSAIVD 224 (286)
T ss_pred ---cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhh-----HHHH-----HHHHhh
Confidence 1234688899999987543 35889999999999999999999997532111 0000 000111
Q ss_pred hhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 944 TNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 944 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
... ...+.....++.+++.+|++.+|++||++.|+++.
T Consensus 225 ~~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 225 GDP-------PTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred cCC-------CCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 000 00111234568899999999999999999999985
No 233
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.97 E-value=2.1e-31 Score=297.80 Aligned_cols=231 Identities=20% Similarity=0.277 Sum_probs=178.2
Q ss_pred ceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhc-CCCceeEEEEEEecCCeeEEEEEecCC
Q 001838 732 NLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRI-RHRNLVKIISACSNDDFKALIMEYMPN 806 (1007)
Q Consensus 732 ~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~E~~~~ 806 (1007)
+.||+|+||+||+|+.. +++.||||+++... ....+.+.+|+.++.++ +||||+++++++.+.+..|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999875 57899999998643 23456688999999998 599999999999999999999999999
Q ss_pred CChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcccccc
Q 001838 807 GSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQT 874 (1007)
Q Consensus 807 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~~~ 874 (1007)
|+|.+++.... .+++..+..++.|++.|++|| |+.+|+|||++ ||+|||+++...... ....
T Consensus 81 ~~L~~~~~~~~-~l~~~~~~~~~~qi~~al~~l---H~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~--~~~~ 154 (327)
T cd05617 81 GDLMFHMQRQR-KLPEEHARFYAAEICIALNFL---HERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG--DTTS 154 (327)
T ss_pred CcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCC--Ccee
Confidence 99999887543 489999999999999999999 56799999764 899999998642211 1123
Q ss_pred cccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCc-chHHHHHHhhcCccHHHHhhhhhccchhhh
Q 001838 875 QTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGE-LSLSRWVNDLLPISVMEVIDTNLLSGEERY 953 (1007)
Q Consensus 875 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~-~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~ 953 (1007)
...||+.|+|||++.+..++.++|||||||++|||++|+.||+...... .....+... .+.. ...
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~--------~~~~----~~~-- 220 (327)
T cd05617 155 TFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQ--------VILE----KPI-- 220 (327)
T ss_pred cccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHH--------HHHh----CCC--
Confidence 4579999999999998899999999999999999999999997432211 111111111 0000 000
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 001838 954 FAAKEQSLLSILNLATECTIESPGKRINAR 983 (1007)
Q Consensus 954 ~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~ 983 (1007)
..+.....++.+++.+|++.||++||++.
T Consensus 221 -~~p~~~~~~~~~li~~~L~~dP~~R~~~~ 249 (327)
T cd05617 221 -RIPRFLSVKASHVLKGFLNKDPKERLGCQ 249 (327)
T ss_pred -CCCCCCCHHHHHHHHHHhccCHHHcCCCC
Confidence 00111234578999999999999999853
No 234
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.97 E-value=3.8e-31 Score=290.58 Aligned_cols=251 Identities=20% Similarity=0.280 Sum_probs=190.3
Q ss_pred cccHHHHHHhcccccccceecccCceEEEEEEEc-CCceEEEEEechhhHHHHHHHHHHHHHHHhc-CCCceeEEEEEEe
Q 001838 715 RFSYHELLQATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKSFQDECEVMKRI-RHRNLVKIISACS 792 (1007)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~ 792 (1007)
.+.++++..++++|+..+.||+|+||+||+|... +++.||+|+++... ....++.+|+.+++++ +||||+++++++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 85 (286)
T cd06638 7 TIIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYY 85 (286)
T ss_pred eEEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeee
Confidence 3566778888999999999999999999999875 58899999886532 2235678899999999 6999999999884
Q ss_pred -----cCCeeEEEEEecCCCChhHhhhc---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------
Q 001838 793 -----NDDFKALIMEYMPNGSLENRLYS---GTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------ 852 (1007)
Q Consensus 793 -----~~~~~~lv~E~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------ 852 (1007)
.++..++||||+++|+|.+++.. ....+++..+..++.|+++|+.|| |+.+|+|+++
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dlkp~nili~~~~~ 162 (286)
T cd06638 86 KKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHL---HVNKTIHRDVKGNNILLTTEGG 162 (286)
T ss_pred ecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHH---HhCCccccCCCHHhEEECCCCC
Confidence 34568999999999999998753 234578888999999999999999 5778999965
Q ss_pred cccceeecceecCCCCcccccccccCCccccccccccc-----CCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHH
Q 001838 853 AHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQ-----GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLS 927 (1007)
Q Consensus 853 ~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~ 927 (1007)
+|++|||+++....... ......|++.|+|||++.. ..++.++|||||||++|||++|+.||...... .
T Consensus 163 ~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~----~ 236 (286)
T cd06638 163 VKLVDFGVSAQLTSTRL--RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPM----R 236 (286)
T ss_pred EEEccCCceeecccCCC--ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchh----H
Confidence 37999999987643221 1233468999999998753 44789999999999999999999998753211 1
Q ss_pred HHHHhhcCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 001838 928 RWVNDLLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGL 989 (1007)
Q Consensus 928 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L 989 (1007)
.+.. ..... .+... .+.....++.+++.+||+.||++|||+.|+++..
T Consensus 237 ~~~~-~~~~~-----~~~~~--------~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 237 ALFK-IPRNP-----PPTLH--------QPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred HHhh-ccccC-----CCccc--------CCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 1100 00000 00000 0001123588999999999999999999999764
No 235
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.97 E-value=2.6e-31 Score=290.35 Aligned_cols=235 Identities=24% Similarity=0.323 Sum_probs=186.2
Q ss_pred cccccceecccCceEEEEEEEc-CCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEec
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYM 804 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~ 804 (1007)
.|+..+.||+|+||.||+|... +++.||+|.++... ....+.+.+|++++++++||||+++++++..++..|+||||+
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence 4666788999999999999865 58899999987443 344567899999999999999999999999999999999999
Q ss_pred CCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCcccc
Q 001838 805 PNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLSM 872 (1007)
Q Consensus 805 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~~~~ 872 (1007)
++|+|.+++..+ .+++..+..++.|+++|+.|| |+.+++|+++ .+++|||+++....... .
T Consensus 85 ~~~~L~~~~~~~--~~~~~~~~~~~~~i~~~l~~l---H~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~--~ 157 (277)
T cd06642 85 GGGSALDLLKPG--PLEETYIATILREILKGLDYL---HSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI--K 157 (277)
T ss_pred CCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHHHH---hcCCeeccCCChheEEEeCCCCEEEccccccccccCcch--h
Confidence 999999988653 478899999999999999999 5788999865 48999999987643221 1
Q ss_pred cccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhh
Q 001838 873 QTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEER 952 (1007)
Q Consensus 873 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~ 952 (1007)
.....|+..|+|||++.+..++.++|||||||++|||++|+.|+....... ...+..... .+.
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--~~~~~~~~~--------~~~------- 220 (277)
T cd06642 158 RNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR--VLFLIPKNS--------PPT------- 220 (277)
T ss_pred hhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhh--HHhhhhcCC--------CCC-------
Confidence 123468889999999988889999999999999999999999987532111 111110000 000
Q ss_pred hHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 953 YFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 953 ~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
.....+.++.+++.+|++.+|++||+|.|++++
T Consensus 221 ---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 221 ---LEGQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred ---CCcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 011223468899999999999999999999985
No 236
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.97 E-value=4.7e-31 Score=290.93 Aligned_cols=238 Identities=23% Similarity=0.317 Sum_probs=188.7
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEec
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYM 804 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~ 804 (1007)
.+|+..+.||.|+||.||+|... +|+.||+|.+........+.+.+|++++++++||||+++++++...+..|+||||+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 98 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL 98 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence 36888999999999999999864 68999999987554444567889999999999999999999999999999999999
Q ss_pred CCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcccc
Q 001838 805 PNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSM 872 (1007)
Q Consensus 805 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~ 872 (1007)
++|+|.+++... .+++.++..++.|++.|++|| |+.+++|++++ ||+|||+++........
T Consensus 99 ~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~L---H~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~-- 171 (296)
T cd06655 99 AGGSLTDVVTET--CMDEAQIAAVCRECLQALEFL---HANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSK-- 171 (296)
T ss_pred CCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEECCCCCEEEccCccchhccccccc--
Confidence 999999988754 489999999999999999999 57789999764 89999998876433211
Q ss_pred cccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhh
Q 001838 873 QTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEER 952 (1007)
Q Consensus 873 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~ 952 (1007)
.....|+..|+|||.+....++.++|||||||++|||++|+.||......+. ..+....... ..
T Consensus 172 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~--~~~~~~~~~~--------~~------ 235 (296)
T cd06655 172 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA--LYLIATNGTP--------EL------ 235 (296)
T ss_pred CCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHhcCCc--------cc------
Confidence 1234688999999999888899999999999999999999999975321110 0000000000 00
Q ss_pred hHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 953 YFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 953 ~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
..+......+.+++.+||+.||++|||+.++++.
T Consensus 236 --~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~ 269 (296)
T cd06655 236 --QNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQH 269 (296)
T ss_pred --CCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 0011223468889999999999999999999865
No 237
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.97 E-value=9.2e-31 Score=284.09 Aligned_cols=239 Identities=22% Similarity=0.344 Sum_probs=185.5
Q ss_pred cccccceecccCceEEEEEEEcCCceEEEEEechhh------HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEE
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQDGMEVAVKVFHQRY------ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALI 800 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 800 (1007)
+|...+.||+|+||+||+|...+|+.||||.++... ....+.+.+|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 477889999999999999998889999999886321 23346788999999999999999999999999999999
Q ss_pred EEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCC
Q 001838 801 MEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQD 868 (1007)
Q Consensus 801 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~ 868 (1007)
|||+++|+|.+++.+.. .+++..+..++.|++.|++|| |+.+|+|+++ .|++|||+++......
T Consensus 81 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 156 (265)
T cd06631 81 MEFVPGGSISSILNRFG-PLPEPVFCKYTKQILDGVAYL---HNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVG 156 (265)
T ss_pred EecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhcc
Confidence 99999999999997643 478888999999999999999 5678999865 3899999998653211
Q ss_pred ----cccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhh
Q 001838 869 ----QLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDT 944 (1007)
Q Consensus 869 ----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~ 944 (1007)
.........|+..|+|||++.+..++.++|||||||++|||++|+.||....... .......... ..+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~-~~~~~~~~~~-------~~~ 228 (265)
T cd06631 157 LHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLA-AMFYIGAHRG-------LMP 228 (265)
T ss_pred ccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHH-HHHHhhhccC-------CCC
Confidence 1111233568999999999988889999999999999999999999997431110 0000000000 000
Q ss_pred hhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001838 945 NLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVT 987 (1007)
Q Consensus 945 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~ 987 (1007)
. .+.....++.+++.+||+.+|++||++.|+++
T Consensus 229 ~----------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 229 R----------LPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred C----------CCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0 01112346889999999999999999999875
No 238
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.97 E-value=1.2e-30 Score=281.68 Aligned_cols=238 Identities=21% Similarity=0.311 Sum_probs=189.6
Q ss_pred cccccceecccCceEEEEEEEc-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEe
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY--ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEY 803 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~ 803 (1007)
+|+..+.||.|+||.||.++.. +++.||+|.+.... ....+++.+|++++++++|+||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 5788999999999999999854 58899999986442 44556789999999999999999999999999999999999
Q ss_pred cCCCChhHhhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCcc
Q 001838 804 MPNGSLENRLYSG-TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQL 870 (1007)
Q Consensus 804 ~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~~ 870 (1007)
|++|+|.+++.+. ...+++..+..++.|++.|+.|| |+.+++|+++ .||+|||+++.......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l---h~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~- 156 (256)
T cd08221 81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYI---HKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS- 156 (256)
T ss_pred cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHH---HhCCccccCCChHhEEEeCCCCEEECcCcceEEcccccc-
Confidence 9999999999765 34588999999999999999999 5678999865 38999999987644321
Q ss_pred cccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccch
Q 001838 871 SMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGE 950 (1007)
Q Consensus 871 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~ 950 (1007)
......|++.|+|||+..+..++.++|||||||++|||++|+.||+.... .+........ ... .
T Consensus 157 -~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~-----~~~~~~~~~~--------~~~-~- 220 (256)
T cd08221 157 -MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNP-----LNLVVKIVQG--------NYT-P- 220 (256)
T ss_pred -cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHHcC--------CCC-C-
Confidence 22345689999999998888899999999999999999999999875221 1111110000 000 0
Q ss_pred hhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 001838 951 ERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGL 989 (1007)
Q Consensus 951 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L 989 (1007)
.......++.+++.+||+.+|++||++.|+++++
T Consensus 221 -----~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 221 -----VVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred -----CccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 0012245688999999999999999999998763
No 239
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.97 E-value=8.4e-31 Score=283.01 Aligned_cols=237 Identities=27% Similarity=0.387 Sum_probs=184.1
Q ss_pred ceecccCceEEEEEEEcC----CceEEEEEechhhH-HHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecCC
Q 001838 732 NLLGIGSFGSVYVARLQD----GMEVAVKVFHQRYE-RALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPN 806 (1007)
Q Consensus 732 ~~ig~G~~g~Vy~~~~~~----g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~ 806 (1007)
+.||+|+||.||+|.... +..||+|.+..... ...+++.+|+.+++++.|||||++++++. .+..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 469999999999997542 36899999875542 34567899999999999999999999876 4467999999999
Q ss_pred CChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCccc-cc
Q 001838 807 GSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLS-MQ 873 (1007)
Q Consensus 807 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~-~~ 873 (1007)
|+|.+++.... .+++..+..++.|++.|++|| |..+++|++++ |++|||+++......... ..
T Consensus 80 ~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~l---h~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~ 155 (257)
T cd05060 80 GPLLKYLKKRR-EIPVSDLKELAHQVAMGMAYL---ESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRAT 155 (257)
T ss_pred CcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHH---hhcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccc
Confidence 99999998655 588999999999999999999 56789999764 899999998764332211 11
Q ss_pred ccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhh
Q 001838 874 TQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEER 952 (1007)
Q Consensus 874 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~ 952 (1007)
....++..|+|||......++.++|||||||++|||++ |+.||..... .....++....+.
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~--~~~~~~~~~~~~~---------------- 217 (257)
T cd05060 156 TAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG--AEVIAMLESGERL---------------- 217 (257)
T ss_pred cCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH--HHHHHHHHcCCcC----------------
Confidence 22234568999999988889999999999999999998 9999975321 1222222111000
Q ss_pred hHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHH
Q 001838 953 YFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKIR 993 (1007)
Q Consensus 953 ~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~ 993 (1007)
+.+...+.++.+++.+||..+|++||++.|+++.|+++.
T Consensus 218 --~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 218 --PRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred --CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 001112346889999999999999999999999999864
No 240
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.97 E-value=7.9e-31 Score=297.59 Aligned_cols=255 Identities=21% Similarity=0.207 Sum_probs=184.6
Q ss_pred hcccccccceecccCceEEEEEEEc-CCceEEEEEechh--hHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCC-----
Q 001838 724 ATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQR--YERALKSFQDECEVMKRIRHRNLVKIISACSNDD----- 795 (1007)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~----- 795 (1007)
..++|...+.||+|+||+||+|+.. +|+.||||++... .....+.+.+|+.++++++||||+++++++...+
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 4578999999999999999999865 5899999999643 2334567889999999999999999999986543
Q ss_pred -eeEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecce
Q 001838 796 -FKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAK 862 (1007)
Q Consensus 796 -~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~ 862 (1007)
..|+||||+++ ++.+.+.. .+++..+..++.|++.||+|| |+.+|+|||++ ||+|||+++
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~qi~~~L~~L---H~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~ 171 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIHM---ELDHERMSYLLYQMLCGIKHL---HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 171 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHhc---cCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCHHHEEECCCCCEEEecCCCcc
Confidence 47999999975 56666643 377888889999999999999 67899999764 899999998
Q ss_pred ecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCc--cHH-
Q 001838 863 FLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPI--SVM- 939 (1007)
Q Consensus 863 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~--~~~- 939 (1007)
...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..+.......... ...
T Consensus 172 ~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~ 247 (359)
T cd07876 172 TACTNF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHI-DQWNKVIEQLGTPSAEFMN 247 (359)
T ss_pred ccccCc---cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCcHHHHH
Confidence 653221 223457899999999999889999999999999999999999999753211 1111111111100 000
Q ss_pred -------HHhhhhhccch-h-----------hhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 001838 940 -------EVIDTNLLSGE-E-----------RYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGL 989 (1007)
Q Consensus 940 -------~~~d~~~~~~~-~-----------~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L 989 (1007)
........... . ...........++.+++.+|++.||++|||+.|++++-
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 316 (359)
T cd07876 248 RLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHP 316 (359)
T ss_pred HHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCc
Confidence 00000000000 0 00000011134688999999999999999999999864
No 241
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.97 E-value=2.9e-31 Score=288.78 Aligned_cols=237 Identities=30% Similarity=0.468 Sum_probs=183.1
Q ss_pred ceecccCceEEEEEEEcC-------CceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEe
Q 001838 732 NLLGIGSFGSVYVARLQD-------GMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEY 803 (1007)
Q Consensus 732 ~~ig~G~~g~Vy~~~~~~-------g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~ 803 (1007)
+.||+|+||.||+|+..+ ++.||||.+.... ......+.+|+.++++++||||++++++|...+..++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 368999999999998642 3579999886543 23456789999999999999999999999999999999999
Q ss_pred cCCCChhHhhhcC------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecc-----------------ccccceeec
Q 001838 804 MPNGSLENRLYSG------TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYM-----------------VAHISDFSI 860 (1007)
Q Consensus 804 ~~~gsL~~~l~~~------~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~-----------------~~kl~DFGl 860 (1007)
+++|+|.+++.+. ...+++.++..++.|++.|++|| |+.+++|++ ..|++|||+
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l---H~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYL---EQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHH---HhCCcccCCCChheEEEecCCCCCCcceEECCccc
Confidence 9999999999742 23478899999999999999999 567899974 358999999
Q ss_pred ceecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHH
Q 001838 861 AKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVM 939 (1007)
Q Consensus 861 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~ 939 (1007)
++...............++..|+|||++....++.++|||||||++|||+| |+.||..... ......+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~--~~~~~~~~-------- 227 (269)
T cd05044 158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNN--QEVLQHVT-------- 227 (269)
T ss_pred ccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCH--HHHHHHHh--------
Confidence 987643322222223346788999999998899999999999999999998 9999864321 11111110
Q ss_pred HHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 001838 940 EVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLK 991 (1007)
Q Consensus 940 ~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~ 991 (1007)
... ....+...+.++.+++.+||+.+|++||++.++.+.|++
T Consensus 228 ----~~~------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 228 ----AGG------RLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred ----cCC------ccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 000 000111234568899999999999999999999999863
No 242
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.97 E-value=3.1e-31 Score=296.57 Aligned_cols=230 Identities=23% Similarity=0.261 Sum_probs=175.2
Q ss_pred ceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHH-HHHHhcCCCceeEEEEEEecCCeeEEEEEecCC
Q 001838 732 NLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDEC-EVMKRIRHRNLVKIISACSNDDFKALIMEYMPN 806 (1007)
Q Consensus 732 ~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~-~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~ 806 (1007)
+.||+|+||+||+|+.. +++.||+|++.... ......+..|. .+++.++||||+++++++...+..|+||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 46999999999999876 57889999997543 12223444444 456788999999999999999999999999999
Q ss_pred CChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcccccc
Q 001838 807 GSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQT 874 (1007)
Q Consensus 807 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~~~ 874 (1007)
|+|.+++.... .+.......++.||+.||+|| |+.+|+|||++ ||+|||+++....... ...
T Consensus 81 ~~L~~~~~~~~-~~~~~~~~~~~~qi~~~L~~l---H~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~--~~~ 154 (325)
T cd05602 81 GELFYHLQRER-CFLEPRARFYAAEIASALGYL---HSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNG--TTS 154 (325)
T ss_pred CcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCC--Ccc
Confidence 99999997654 367778888999999999999 57899999874 8999999986432211 123
Q ss_pred cccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhhH
Q 001838 875 QTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYF 954 (1007)
Q Consensus 875 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 954 (1007)
...||+.|+|||++.+..++.++||||+||++|||++|+.||...... ...+.+ ......
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--~~~~~i-----------~~~~~~------- 214 (325)
T cd05602 155 TFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA--EMYDNI-----------LNKPLQ------- 214 (325)
T ss_pred cccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHH--HHHHHH-----------HhCCcC-------
Confidence 457999999999999889999999999999999999999999753211 111111 000000
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 955 AAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 955 ~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
..+.....+.+++.+|++.||++||++.+.+.+
T Consensus 215 -~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ 247 (325)
T cd05602 215 -LKPNITNSARHLLEGLLQKDRTKRLGAKDDFME 247 (325)
T ss_pred -CCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHH
Confidence 001123468899999999999999998754433
No 243
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.97 E-value=2.8e-31 Score=297.35 Aligned_cols=243 Identities=16% Similarity=0.239 Sum_probs=184.6
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIM 801 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 801 (1007)
++|...+.||+|+||+||+++.. +++.||+|++.... ....+.+.+|+.++..++|+||+++++++.+++..|+||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 47889999999999999999876 58899999997532 233456888999999999999999999999999999999
Q ss_pred EecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCc
Q 001838 802 EYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQ 869 (1007)
Q Consensus 802 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~ 869 (1007)
||+++|+|.+++.+....+++..+..++.|++.||+|| |+.+|+|||++ ||+|||+++.......
T Consensus 81 Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~l---H~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 157 (331)
T cd05624 81 DYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSI---HQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGT 157 (331)
T ss_pred eCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH---HHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCc
Confidence 99999999999987555688889999999999999999 57899999764 8999999987653322
Q ss_pred ccccccccCCccccccccccc-----CCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhh
Q 001838 870 LSMQTQTLATIGYMAPEYGVQ-----GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDT 944 (1007)
Q Consensus 870 ~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~ 944 (1007)
. ......||+.|+|||++.. +.++.++|||||||++|||++|+.||...... +..... ...
T Consensus 158 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~-----~~~~~i--------~~~ 223 (331)
T cd05624 158 V-QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLV-----ETYGKI--------MNH 223 (331)
T ss_pred e-eeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHH-----HHHHHH--------HcC
Confidence 1 1123569999999998865 46889999999999999999999999743211 111000 000
Q ss_pred hhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCC--CCCHHHHHHH
Q 001838 945 NLLSGEERYFAAKEQSLLSILNLATECTIESPGK--RINAREIVTG 988 (1007)
Q Consensus 945 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~--Rpt~~evl~~ 988 (1007)
.. ...........+.++.+++.+|+..++++ |+++++++++
T Consensus 224 ~~---~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 224 EE---RFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred CC---cccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 00 00000000112446888899988866544 5688888765
No 244
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.97 E-value=4e-31 Score=292.54 Aligned_cols=255 Identities=18% Similarity=0.246 Sum_probs=187.0
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEe
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEY 803 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~ 803 (1007)
++|...+.||+|+||.||+|+.+ +++.||+|.++... ......+.+|+.++++++||||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 57888999999999999999876 58899999986432 22234677899999999999999999999999999999999
Q ss_pred cCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCccc
Q 001838 804 MPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLS 871 (1007)
Q Consensus 804 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~ 871 (1007)
++ ++|.+++......+++..+..++.|+++||+|| |+.+|+|+|++ ||+|||+++.......
T Consensus 86 ~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~l---H~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~-- 159 (301)
T cd07873 86 LD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYC---HRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK-- 159 (301)
T ss_pred cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCC--
Confidence 97 599998877655688999999999999999999 67899999663 8999999986532211
Q ss_pred ccccccCCcccccccccccC-CCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcC----ccHHHHhhhhh
Q 001838 872 MQTQTLATIGYMAPEYGVQG-RVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLP----ISVMEVIDTNL 946 (1007)
Q Consensus 872 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~----~~~~~~~d~~~ 946 (1007)
......+++.|+|||++.+. .++.++|||||||++|||+||+.||...... .....+..... ......++...
T Consensus 160 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (301)
T cd07873 160 TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVE--EQLHFIFRILGTPTEETWPGILSNEE 237 (301)
T ss_pred cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHcCCCChhhchhhhcccc
Confidence 12234578899999987654 5789999999999999999999999753221 11111111110 00001110000
Q ss_pred c-----cc-hhh-hHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 947 L-----SG-EER-YFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 947 ~-----~~-~~~-~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
. .. ... ..........++.+++.+|++.||.+|||+.|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h 286 (301)
T cd07873 238 FKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKH 286 (301)
T ss_pred ccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 0 00 000 000011223467899999999999999999999974
No 245
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.97 E-value=7.1e-31 Score=285.66 Aligned_cols=239 Identities=21% Similarity=0.281 Sum_probs=174.2
Q ss_pred eecccCceEEEEEEEcC---CceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecCCCC
Q 001838 733 LLGIGSFGSVYVARLQD---GMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGS 808 (1007)
Q Consensus 733 ~ig~G~~g~Vy~~~~~~---g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~gs 808 (1007)
.||+|+||+||+|...+ ...||+|.+.... ......+.+|+++++.++||||+++++++.+.+..++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 58999999999997543 4568888876432 3445678899999999999999999999999999999999999999
Q ss_pred hhHhhhcCC----CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcccc
Q 001838 809 LENRLYSGT----CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSM 872 (1007)
Q Consensus 809 L~~~l~~~~----~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~ 872 (1007)
|.+++.... ...++....+++.|++.|++|| |+.+|+|||++ ||+|||+++..........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~ 158 (269)
T cd05042 82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWL---HQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYIT 158 (269)
T ss_pred HHHHHHhccccccccccHHHHHHHHHHHHHHHHHH---HhcCEecccccHhheEecCCCcEEEeccccccccccchheec
Confidence 999997643 2346777889999999999999 57789999764 8999999976533222222
Q ss_pred cccccCCccccccccccc-------CCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHHHHhhh
Q 001838 873 QTQTLATIGYMAPEYGVQ-------GRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEVIDT 944 (1007)
Q Consensus 873 ~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~ 944 (1007)
.....+++.|+|||++.. ..++.++|||||||++|||++ |..||......+ .+......... ...++
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~-~~~~~~~~~~~----~~~~~ 233 (269)
T cd05042 159 KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ-VLKQVVREQDI----KLPKP 233 (269)
T ss_pred cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH-HHHHHhhccCc----cCCCC
Confidence 233456778999998643 356889999999999999999 788886532111 11111100000 00000
Q ss_pred hhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 001838 945 NLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLL 990 (1007)
Q Consensus 945 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~ 990 (1007)
. ........+.+++..|+ .||++|||++||++.|.
T Consensus 234 ~----------~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 234 Q----------LDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred c----------ccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 0 01112345677888898 59999999999999873
No 246
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=4.4e-31 Score=298.74 Aligned_cols=180 Identities=23% Similarity=0.273 Sum_probs=153.4
Q ss_pred hcccccccceecccCceEEEEEEEc-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEE
Q 001838 724 ATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIME 802 (1007)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E 802 (1007)
...+|...+.||+|+||+||+|+.. +++.||+|+.... ....|+.++++++|||||++++++...+..++|||
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 137 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLP 137 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEE
Confidence 3457999999999999999999876 4788999986432 23569999999999999999999999999999999
Q ss_pred ecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcc
Q 001838 803 YMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQL 870 (1007)
Q Consensus 803 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~ 870 (1007)
|+. |+|.+++......+++..+.+++.||+.||.|| |+.+|+|||++ ||+|||+++......
T Consensus 138 ~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~-- 211 (357)
T PHA03209 138 HYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYL---HAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAP-- 211 (357)
T ss_pred ccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEECCCCCEEEecCccccccccCc--
Confidence 995 689998877666789999999999999999999 56789999774 899999998643221
Q ss_pred cccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCC
Q 001838 871 SMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPT 916 (1007)
Q Consensus 871 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~ 916 (1007)
......||+.|+|||++.+..++.++|||||||++|||+++..|+
T Consensus 212 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 212 -AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred -ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 123456899999999999989999999999999999999866554
No 247
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.97 E-value=5.9e-31 Score=293.71 Aligned_cols=229 Identities=21% Similarity=0.266 Sum_probs=179.4
Q ss_pred cccccceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcC-CCceeEEEEEEecCCeeEEEE
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIR-HRNLVKIISACSNDDFKALIM 801 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~ 801 (1007)
+|...+.||+|+||+||+|+.. +|+.||||++.... ....+.+..|.+++..+. |++|+++++++.+.+..|+||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 3677899999999999999865 68999999997543 233456788999998885 678889999999999999999
Q ss_pred EecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCc
Q 001838 802 EYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQ 869 (1007)
Q Consensus 802 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~ 869 (1007)
||+++|+|.+++.+.. .+++.++..++.|++.||+|| |+.+|+|||++ ||+|||+++.......
T Consensus 81 Ey~~~g~L~~~i~~~~-~l~~~~~~~i~~qi~~al~~l---H~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~ 156 (323)
T cd05615 81 EYVNGGDLMYHIQQVG-KFKEPQAVFYAAEISVGLFFL---HRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGV 156 (323)
T ss_pred cCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCCc
Confidence 9999999999987644 488999999999999999999 57799999764 8999999986432211
Q ss_pred ccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccc
Q 001838 870 LSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSG 949 (1007)
Q Consensus 870 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~ 949 (1007)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...+.+ ......
T Consensus 157 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~--~~~~~i-----------~~~~~~-- 219 (323)
T cd05615 157 --TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED--ELFQSI-----------MEHNVS-- 219 (323)
T ss_pred --cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHH--HHHHHH-----------HhCCCC--
Confidence 123456999999999998888999999999999999999999999753211 111110 000000
Q ss_pred hhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCH
Q 001838 950 EERYFAAKEQSLLSILNLATECTIESPGKRINA 982 (1007)
Q Consensus 950 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~ 982 (1007)
.+.....++.+++.+|++.+|++|++.
T Consensus 220 ------~p~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 220 ------YPKSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred ------CCccCCHHHHHHHHHHcccCHhhCCCC
Confidence 001123467899999999999999985
No 248
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.97 E-value=1e-30 Score=282.08 Aligned_cols=236 Identities=26% Similarity=0.397 Sum_probs=185.6
Q ss_pred ccccccceecccCceEEEEEEEcCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEe-cCCeeEEEEEec
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACS-NDDFKALIMEYM 804 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~-~~~~~~lv~E~~ 804 (1007)
++|...+.||+|+||.||+|..+ |..||+|.++... ..+.+.+|+.++++++|+||+++++++. .++..++||||+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~ 82 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 82 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence 46888899999999999999875 7889999987543 2357889999999999999999999764 456789999999
Q ss_pred CCCChhHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCccc
Q 001838 805 PNGSLENRLYSGT-CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLS 871 (1007)
Q Consensus 805 ~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~~~ 871 (1007)
++|+|.+++.... ..+++..+.+++.|++.||+|| |+.+++|+++ +|++|||+++......
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~--- 156 (256)
T cd05082 83 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL---EANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ--- 156 (256)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH---HhCCEeccccchheEEEcCCCcEEecCCccceeccccC---
Confidence 9999999997643 3478999999999999999999 5778999965 3899999998654221
Q ss_pred ccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccch
Q 001838 872 MQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGE 950 (1007)
Q Consensus 872 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~ 950 (1007)
....++..|+|||++....++.++|||||||++|||++ |+.||..... .....++....+.
T Consensus 157 --~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~--~~~~~~~~~~~~~-------------- 218 (256)
T cd05082 157 --DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--KDVVPRVEKGYKM-------------- 218 (256)
T ss_pred --CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHhcCCCC--------------
Confidence 22345678999999988889999999999999999998 9999864211 0111111110000
Q ss_pred hhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHH
Q 001838 951 ERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKI 992 (1007)
Q Consensus 951 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i 992 (1007)
......+..+.+++.+|++.+|++|||+.+++++|+++
T Consensus 219 ----~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 219 ----DAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred ----CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 00112245688999999999999999999999999864
No 249
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.97 E-value=4.6e-31 Score=295.91 Aligned_cols=243 Identities=16% Similarity=0.229 Sum_probs=183.9
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIM 801 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 801 (1007)
++|...+.||+|+||+||+++.+ +++.||+|++.+.. ....+.+.+|+.++..++|+||+++++++.+.+..|+||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 46888999999999999999976 47889999997532 223455888999999999999999999999999999999
Q ss_pred EecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCc
Q 001838 802 EYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQ 869 (1007)
Q Consensus 802 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~ 869 (1007)
||+++|+|.+++.+....+++..+..++.|++.|++|| |+.+|+|||++ ||+|||+++.......
T Consensus 81 ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~l---H~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~ 157 (332)
T cd05623 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSV---HQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT 157 (332)
T ss_pred eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH---HHCCeEecCCCHHHEEECCCCCEEEeecchheecccCCc
Confidence 99999999999987555688989999999999999999 57889999764 8999999986543222
Q ss_pred ccccccccCCcccccccccc-----cCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhh
Q 001838 870 LSMQTQTLATIGYMAPEYGV-----QGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDT 944 (1007)
Q Consensus 870 ~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~ 944 (1007)
.......||+.|+|||++. ...++.++|||||||++|||++|+.||..... .+........
T Consensus 158 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~-----~~~~~~i~~~-------- 223 (332)
T cd05623 158 -VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESL-----VETYGKIMNH-------- 223 (332)
T ss_pred -ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCH-----HHHHHHHhCC--------
Confidence 1123357999999999886 34689999999999999999999999975311 1111111000
Q ss_pred hhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCC--CCCHHHHHHH
Q 001838 945 NLLSGEERYFAAKEQSLLSILNLATECTIESPGK--RINAREIVTG 988 (1007)
Q Consensus 945 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~--Rpt~~evl~~ 988 (1007)
.. .............++.+++.+|+..++++ |+++.|++++
T Consensus 224 ~~---~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 224 KE---RFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred Cc---cccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 00 00000001122446788888888654444 7899999887
No 250
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.97 E-value=1.2e-30 Score=284.79 Aligned_cols=237 Identities=26% Similarity=0.338 Sum_probs=188.4
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEe
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEY 803 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~ 803 (1007)
++|+..+.||.|+||.||+|+.. +++.||+|++.... ......+.+|++++++++||||+++++++.++...|+|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence 46888899999999999999876 58899999987543 33446788999999999999999999999999999999999
Q ss_pred cCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCccc
Q 001838 804 MPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLS 871 (1007)
Q Consensus 804 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~~~ 871 (1007)
+++|+|.+++... .+++..+..++.|++.|+.|| |+.+++|+++ .+++|||+++...... .
T Consensus 81 ~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~l---h~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~--~ 153 (274)
T cd06609 81 CGGGSCLDLLKPG--KLDETYIAFILREVLLGLEYL---HEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM--S 153 (274)
T ss_pred eCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCHHHEEECCCCCEEEcccccceeecccc--c
Confidence 9999999999865 589999999999999999999 5678999865 3799999998875331 1
Q ss_pred ccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchh
Q 001838 872 MQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEE 951 (1007)
Q Consensus 872 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~ 951 (1007)
......|++.|+|||++.+..++.++|||||||++|||+||+.||....... ...-+.... .+....
T Consensus 154 ~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~--~~~~~~~~~--------~~~~~~--- 220 (274)
T cd06609 154 KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMR--VLFLIPKNN--------PPSLEG--- 220 (274)
T ss_pred ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHH--HHHHhhhcC--------CCCCcc---
Confidence 1234568889999999988889999999999999999999999997532111 000000000 000000
Q ss_pred hhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 952 RYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 952 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
.....++.+++.+||..+|++|||+++++++
T Consensus 221 ------~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 221 ------NKFSKPFKDFVSLCLNKDPKERPSAKELLKH 251 (274)
T ss_pred ------cccCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 0023468899999999999999999999875
No 251
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.97 E-value=4.2e-31 Score=286.05 Aligned_cols=242 Identities=26% Similarity=0.426 Sum_probs=190.9
Q ss_pred cccccccceecccCceEEEEEEEcCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEec
Q 001838 725 TDRFSKNNLLGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYM 804 (1007)
Q Consensus 725 ~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~ 804 (1007)
.++|...+.||+|+||+||+|..++++.||||.+..... ..+++.+|+.++++++||||+++++++......++||||+
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 83 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTM-SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYM 83 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCcc-CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEecc
Confidence 367888999999999999999988888999999975432 2367889999999999999999999999988999999999
Q ss_pred CCCChhHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCccc
Q 001838 805 PNGSLENRLYSGT-CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLS 871 (1007)
Q Consensus 805 ~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~ 871 (1007)
++++|.+++.... ..+++..+..++.|++.|+.|| |+.+++|+++. |++|||+++...... ..
T Consensus 84 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~l---h~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~-~~ 159 (261)
T cd05034 84 SKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYL---ESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDE-YT 159 (261)
T ss_pred CCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCcchheEEEcCCCCEEECccccceeccchh-hh
Confidence 9999999997643 4689999999999999999999 56789998663 899999998764321 11
Q ss_pred ccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccch
Q 001838 872 MQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGE 950 (1007)
Q Consensus 872 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~ 950 (1007)
......++..|+|||.+.+..++.++|||||||++||++| |+.||...... .....+... ....
T Consensus 160 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~--~~~~~~~~~------------~~~~- 224 (261)
T cd05034 160 AREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR--EVLEQVERG------------YRMP- 224 (261)
T ss_pred hhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcC------------CCCC-
Confidence 1122335678999999988889999999999999999999 99998653211 111111000 0000
Q ss_pred hhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 001838 951 ERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLK 991 (1007)
Q Consensus 951 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~ 991 (1007)
.+...+.++.+++.+|++.+|++||+++|+.+.|+.
T Consensus 225 -----~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 225 -----RPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred -----CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 001113468999999999999999999999998874
No 252
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.97 E-value=1.3e-30 Score=282.00 Aligned_cols=241 Identities=24% Similarity=0.381 Sum_probs=190.0
Q ss_pred cccccccceecccCceEEEEEEEcCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEec
Q 001838 725 TDRFSKNNLLGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYM 804 (1007)
Q Consensus 725 ~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~ 804 (1007)
.++|...+.||+|+||.||+|...++..||+|.+.... ...+.+.+|++++++++|+||+++++++.+ ...++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~ 82 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFM 82 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeC
Confidence 35788899999999999999998778889999987543 334678999999999999999999999887 7789999999
Q ss_pred CCCChhHhhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCccc
Q 001838 805 PNGSLENRLYSG-TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLS 871 (1007)
Q Consensus 805 ~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~~~ 871 (1007)
++|+|.+++.+. ....++..+..++.|++.|++|| |+.+++|+++ .|++|||.++....... .
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~l---H~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-~ 158 (260)
T cd05073 83 AKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFI---EQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY-T 158 (260)
T ss_pred CCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHH---HhCCccccccCcceEEEcCCCcEEECCCcceeeccCCCc-c
Confidence 999999999763 34578889999999999999999 5678999975 48999999987643221 1
Q ss_pred ccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccch
Q 001838 872 MQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGE 950 (1007)
Q Consensus 872 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~ 950 (1007)
......++..|+|||++....++.++|||||||++||++| |+.||..... .....+.......
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~--~~~~~~~~~~~~~-------------- 222 (260)
T cd05073 159 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN--PEVIRALERGYRM-------------- 222 (260)
T ss_pred cccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCH--HHHHHHHhCCCCC--------------
Confidence 1223346678999999988889999999999999999999 9999875321 1111111111000
Q ss_pred hhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 001838 951 ERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLK 991 (1007)
Q Consensus 951 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~ 991 (1007)
+.....+.++.+++.+|++.+|++||++.++.+.|+.
T Consensus 223 ----~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 223 ----PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred ----CCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 0011224468899999999999999999999999874
No 253
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.97 E-value=4.1e-31 Score=285.11 Aligned_cols=237 Identities=19% Similarity=0.282 Sum_probs=186.9
Q ss_pred cccccceecccCceEEEEEEEc-CCceEEEEEechh-hHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEec
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQR-YERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYM 804 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~ 804 (1007)
+|+..+.||+|+||.||++... +++.||+|.++.. .....+.+.+|+.++++++||||+++++++.+++..|+||||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 4778899999999999999865 6889999998643 2344567889999999999999999999999999999999999
Q ss_pred CCCChhHhhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCccc
Q 001838 805 PNGSLENRLYSG-TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLS 871 (1007)
Q Consensus 805 ~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~ 871 (1007)
++|+|.+++... ...++......++.|++.|+.|| |+.+|+|++++ +++|||.++.......
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~l---H~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~-- 155 (255)
T cd08219 81 DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHI---HEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGA-- 155 (255)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH---hhCCcccCCCCcceEEECCCCcEEEcccCcceeeccccc--
Confidence 999999988653 34578889999999999999999 67899998663 7999999987643221
Q ss_pred ccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchh
Q 001838 872 MQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEE 951 (1007)
Q Consensus 872 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~ 951 (1007)
......|++.|+|||+.....++.++||||||+++|+|++|+.||...... .......... ..
T Consensus 156 ~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~-----~~~~~~~~~~--------~~---- 218 (255)
T cd08219 156 YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWK-----NLILKVCQGS--------YK---- 218 (255)
T ss_pred ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHH-----HHHHHHhcCC--------CC----
Confidence 123356889999999998888999999999999999999999999753111 1110000000 00
Q ss_pred hhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 952 RYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 952 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
+.+.....++.+++.+||+.||++|||+.|++.+
T Consensus 219 ---~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 219 ---PLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred ---CCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 0011123457899999999999999999999865
No 254
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.97 E-value=4.2e-31 Score=294.98 Aligned_cols=225 Identities=22% Similarity=0.291 Sum_probs=173.1
Q ss_pred ceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHH-HHHhcCCCceeEEEEEEecCCeeEEEEEecCC
Q 001838 732 NLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECE-VMKRIRHRNLVKIISACSNDDFKALIMEYMPN 806 (1007)
Q Consensus 732 ~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~ 806 (1007)
+.||+|+||+||+|+.. +|+.||+|++.... ......+..|.. +++.++|||||++++++.+.+..|+|||||++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999975 58899999997543 222344555554 67889999999999999999999999999999
Q ss_pred CChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcccccc
Q 001838 807 GSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQT 874 (1007)
Q Consensus 807 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~~~ 874 (1007)
|+|.+++.... .++...+..++.||+.||+|| |+.+|+|||++ ||+|||+++...... ....
T Consensus 81 ~~L~~~l~~~~-~~~~~~~~~~~~qi~~~L~~l---H~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~--~~~~ 154 (321)
T cd05603 81 GELFFHLQRER-CFLEPRARFYAAEVASAIGYL---HSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE--ETTS 154 (321)
T ss_pred CCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCC--Cccc
Confidence 99998887543 477888888999999999999 57789999774 899999998642221 1223
Q ss_pred cccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhhH
Q 001838 875 QTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYF 954 (1007)
Q Consensus 875 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 954 (1007)
...||+.|+|||++....++.++|||||||++|||++|+.||..... ....... ......
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----~~~~~~i--------~~~~~~------- 214 (321)
T cd05603 155 TFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV-----SQMYDNI--------LHKPLQ------- 214 (321)
T ss_pred cccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH-----HHHHHHH--------hcCCCC-------
Confidence 45799999999999888899999999999999999999999975321 1111111 000000
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 001838 955 AAKEQSLLSILNLATECTIESPGKRINAR 983 (1007)
Q Consensus 955 ~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~ 983 (1007)
.+.....++.+++.+|++.||++||++.
T Consensus 215 -~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 215 -LPGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred -CCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 0011234688999999999999999864
No 255
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.97 E-value=4.4e-31 Score=299.29 Aligned_cols=255 Identities=20% Similarity=0.214 Sum_probs=185.0
Q ss_pred HhcccccccceecccCceEEEEEEEc-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecC-----
Q 001838 723 QATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY--ERALKSFQDECEVMKRIRHRNLVKIISACSND----- 794 (1007)
Q Consensus 723 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~----- 794 (1007)
...++|...+.||+|+||.||+|... .++.||||++.... ....+.+.+|+.+++.++||||+++++++...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 34578999999999999999999865 58899999997532 33456788999999999999999999988643
Q ss_pred -CeeEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecc
Q 001838 795 -DFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIA 861 (1007)
Q Consensus 795 -~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla 861 (1007)
...|+||||+++ ++.+.+.. .+++..+..++.|++.||+|| |+.+|+|||++ ||+|||++
T Consensus 94 ~~~~~lv~e~~~~-~l~~~~~~---~l~~~~~~~~~~qi~~aL~~L---H~~givHrDikp~Nill~~~~~~kl~Dfg~~ 166 (355)
T cd07874 94 FQDVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHL---HSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 166 (355)
T ss_pred cceeEEEhhhhcc-cHHHHHhh---cCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCChHHEEECCCCCEEEeeCccc
Confidence 247999999975 67766653 378888999999999999999 67899999764 89999999
Q ss_pred eecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcC------
Q 001838 862 KFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLP------ 935 (1007)
Q Consensus 862 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~------ 935 (1007)
+...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+ .....+.....
T Consensus 167 ~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~ 242 (355)
T cd07874 167 RTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID-QWNKVIEQLGTPCPEFM 242 (355)
T ss_pred ccCCCcc---ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHH
Confidence 8654321 1234578999999999988889999999999999999999999997532111 00000111000
Q ss_pred ----ccHHHHhhhhhc----------cch--hhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 936 ----ISVMEVIDTNLL----------SGE--ERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 936 ----~~~~~~~d~~~~----------~~~--~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
......++.... ... ............++.+++.+|++.||++|||+.|++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 243 KKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 001111110000 000 00000011123467899999999999999999999986
No 256
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.97 E-value=6.9e-31 Score=296.33 Aligned_cols=255 Identities=22% Similarity=0.255 Sum_probs=185.0
Q ss_pred HHhcccccccceecccCceEEEEEEEc-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecC----
Q 001838 722 LQATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY--ERALKSFQDECEVMKRIRHRNLVKIISACSND---- 794 (1007)
Q Consensus 722 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~---- 794 (1007)
.+..++|...+.||+|+||+||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++...
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07878 11 WEVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIE 90 (343)
T ss_pred hhhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccc
Confidence 345678999999999999999999864 68899999987542 23345678899999999999999999988643
Q ss_pred --CeeEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeec
Q 001838 795 --DFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSI 860 (1007)
Q Consensus 795 --~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGl 860 (1007)
...|+++|++ +++|.+++..+ .+++..+..++.|++.||+|| |+.+|+|||++ ||+|||+
T Consensus 91 ~~~~~~~~~~~~-~~~l~~~~~~~--~l~~~~~~~i~~qi~~aL~~L---H~~~ivHrdikp~Nil~~~~~~~kl~Dfg~ 164 (343)
T cd07878 91 NFNEVYLVTNLM-GADLNNIVKCQ--KLSDEHVQFLIYQLLRGLKYI---HSAGIIHRDLKPSNVAVNEDCELRILDFGL 164 (343)
T ss_pred ccCcEEEEeecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHH---HHCCeecccCChhhEEECCCCCEEEcCCcc
Confidence 3578999998 77998887643 488999999999999999999 57799999764 8999999
Q ss_pred ceecCCCCcccccccccCCccccccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCc--c
Q 001838 861 AKFLNGQDQLSMQTQTLATIGYMAPEYGVQ-GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPI--S 937 (1007)
Q Consensus 861 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~--~ 937 (1007)
++..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ..+..+....... .
T Consensus 165 ~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~ 238 (343)
T cd07878 165 ARQADDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYI-DQLKRIMEVVGTPSPE 238 (343)
T ss_pred ceecCCC-----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHHhCCCCHH
Confidence 9876432 134568999999999876 46899999999999999999999999753211 1111111111100 0
Q ss_pred HHHHhhh--------hhcc-chhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 938 VMEVIDT--------NLLS-GEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 938 ~~~~~d~--------~~~~-~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
....+.. .+.. ...............+.+++.+|++.||++|||+.|++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 239 VLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred HHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000000 0000 0000000000112357899999999999999999999976
No 257
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.97 E-value=4.9e-31 Score=285.28 Aligned_cols=241 Identities=27% Similarity=0.416 Sum_probs=185.1
Q ss_pred ccccceecccCceEEEEEEEc-CCceEEEEEechhhHHH--HHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEec
Q 001838 728 FSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERA--LKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYM 804 (1007)
Q Consensus 728 ~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~ 804 (1007)
|+..+.||+|+||+||+|... +++.||+|++....... .....+|+.++++++||||+++++++.+.+..++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 567889999999999999977 46789999998665332 234456999999999999999999999999999999999
Q ss_pred CCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcccc
Q 001838 805 PNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSM 872 (1007)
Q Consensus 805 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~ 872 (1007)
++++|.+++... ..+++..+..++.|+++||+||| +.+|+|+|++ +|+|||.+...... ...
T Consensus 81 ~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~L~~Lh---~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~--~~~ 154 (260)
T PF00069_consen 81 PGGSLQDYLQKN-KPLSEEEILKIAYQILEALAYLH---SKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSEN--NEN 154 (260)
T ss_dssp TTEBHHHHHHHH-SSBBHHHHHHHHHHHHHHHHHHH---HTTEEESSBSGGGEEESTTSEEEESSGTTTEESTST--TSE
T ss_pred cccccccccccc-ccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccc--ccc
Confidence 999999999832 34799999999999999999995 5799999774 89999999864211 122
Q ss_pred cccccCCcccccccccc-cCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchh
Q 001838 873 QTQTLATIGYMAPEYGV-QGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEE 951 (1007)
Q Consensus 873 ~~~~~gt~~y~aPE~~~-~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~ 951 (1007)
.....++..|+|||++. ...++.++||||+|+++|+|++|+.||..... ......... ...... .
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~--~~~~~~~~~--------~~~~~~----~ 220 (260)
T PF00069_consen 155 FNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNS--DDQLEIIEK--------ILKRPL----P 220 (260)
T ss_dssp BSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSH--HHHHHHHHH--------HHHTHH----H
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccc--hhhhhhhhh--------cccccc----c
Confidence 34567899999999988 77899999999999999999999999986410 000000000 000000 0
Q ss_pred hhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 952 RYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 952 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
...........++.+++.+||+.||++||++.|+++.
T Consensus 221 ~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~ 257 (260)
T PF00069_consen 221 SSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKH 257 (260)
T ss_dssp HHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTS
T ss_pred ccccccchhHHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0000000012579999999999999999999999863
No 258
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.97 E-value=1.7e-30 Score=289.82 Aligned_cols=182 Identities=20% Similarity=0.280 Sum_probs=147.3
Q ss_pred cceecccCceEEEEEEEc---CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEec--CCeeEEEEEecC
Q 001838 731 NNLLGIGSFGSVYVARLQ---DGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN--DDFKALIMEYMP 805 (1007)
Q Consensus 731 ~~~ig~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~lv~E~~~ 805 (1007)
.+.||+|+||+||+|+.. +++.||+|++..... ...+.+|++++++++|||||++++++.. +...|+||||+.
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC--cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 468999999999999865 467899999875421 2456789999999999999999999864 456899999996
Q ss_pred CCChhHhhhcC--------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc----------------cccceeecc
Q 001838 806 NGSLENRLYSG--------TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV----------------AHISDFSIA 861 (1007)
Q Consensus 806 ~gsL~~~l~~~--------~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~----------------~kl~DFGla 861 (1007)
++|.+++... ...+++..+..++.|++.||+|| |+.+|+|||+ +||+|||+|
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~L---H~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 84 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYL---HANWVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred -CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHH---HhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 4888877532 12478888999999999999999 6788999965 389999999
Q ss_pred eecCCCCc-ccccccccCCcccccccccccC-CCCchhhHHHHHHHHHHHHhCCCCCCc
Q 001838 862 KFLNGQDQ-LSMQTQTLATIGYMAPEYGVQG-RVSTRGDVYSYGIMLMETFTGKKPTDE 918 (1007)
Q Consensus 862 ~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvil~elltG~~p~~~ 918 (1007)
+....... ........||+.|+|||++.+. .++.++||||+||++|||++|++||..
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~ 218 (317)
T cd07868 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred eccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccC
Confidence 87643221 1122346789999999998764 589999999999999999999999964
No 259
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=8e-31 Score=274.21 Aligned_cols=240 Identities=25% Similarity=0.338 Sum_probs=189.7
Q ss_pred cccccceecccCceEEEEEEEcC-CceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEE
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIME 802 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~~-g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E 802 (1007)
.|+..+.||.|.-|+||++++++ +..+|+|++.+.. .+...+.+.|-+||+.+.||.++.||+.|+.+...|+|||
T Consensus 78 ~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~me 157 (459)
T KOG0610|consen 78 HFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVME 157 (459)
T ss_pred HHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEe
Confidence 45567889999999999999874 6899999998764 3455678899999999999999999999999999999999
Q ss_pred ecCCCChhHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCC--
Q 001838 803 YMPNGSLENRLYSGT-CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQ-- 867 (1007)
Q Consensus 803 ~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~-- 867 (1007)
||+||+|....+++. ..++...+.-+|.+|+-||+|| |-.|||.||++ .++||.++......
T Consensus 158 yCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYL---HmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt 234 (459)
T KOG0610|consen 158 YCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYL---HMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPT 234 (459)
T ss_pred cCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHH---HhhceeeccCCcceeEEecCCcEEeeeccccccCCCCCe
Confidence 999999999887653 4688888888999999999999 78999999886 58999887543100
Q ss_pred -------------------------------Cc---------------------ccccccccCCcccccccccccCCCCc
Q 001838 868 -------------------------------DQ---------------------LSMQTQTLATIGYMAPEYGVQGRVST 895 (1007)
Q Consensus 868 -------------------------------~~---------------------~~~~~~~~gt~~y~aPE~~~~~~~~~ 895 (1007)
.. .......+||-.|+|||++.+..++.
T Consensus 235 ~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgs 314 (459)
T KOG0610|consen 235 LVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGS 314 (459)
T ss_pred eeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCc
Confidence 00 00112347999999999999999999
Q ss_pred hhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCC
Q 001838 896 RGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIES 975 (1007)
Q Consensus 896 ~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~ 975 (1007)
++|+|+|||++|||+.|+.||.+....+ .+..++...+.-.. .+..+.++.||+++.|..|
T Consensus 315 AVDWWtfGIflYEmLyG~TPFKG~~~~~-------------Tl~NIv~~~l~Fp~------~~~vs~~akDLIr~LLvKd 375 (459)
T KOG0610|consen 315 AVDWWTFGIFLYEMLYGTTPFKGSNNKE-------------TLRNIVGQPLKFPE------EPEVSSAAKDLIRKLLVKD 375 (459)
T ss_pred hhhHHHHHHHHHHHHhCCCCcCCCCchh-------------hHHHHhcCCCcCCC------CCcchhHHHHHHHHHhccC
Confidence 9999999999999999999998643222 12222222221111 1133567899999999999
Q ss_pred CCCCCC----HHHHHHH
Q 001838 976 PGKRIN----AREIVTG 988 (1007)
Q Consensus 976 p~~Rpt----~~evl~~ 988 (1007)
|++|.. |.||-++
T Consensus 376 P~kRlg~~rGA~eIK~H 392 (459)
T KOG0610|consen 376 PSKRLGSKRGAAEIKRH 392 (459)
T ss_pred hhhhhccccchHHhhcC
Confidence 999998 7776543
No 260
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.97 E-value=1.2e-30 Score=292.21 Aligned_cols=255 Identities=20% Similarity=0.271 Sum_probs=181.0
Q ss_pred ccceeccc--CceEEEEEEEc-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEec
Q 001838 730 KNNLLGIG--SFGSVYVARLQ-DGMEVAVKVFHQRY--ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYM 804 (1007)
Q Consensus 730 ~~~~ig~G--~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~ 804 (1007)
..++||+| +||+||+++.+ +|+.||||+++... ....+.+.+|+++++.++|||||+++++|..++..++|||||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 35689999 78999999865 68999999997542 334467788999999999999999999999999999999999
Q ss_pred CCCChhHhhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCc-c
Q 001838 805 PNGSLENRLYSG-TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQ-L 870 (1007)
Q Consensus 805 ~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~-~ 870 (1007)
++|+|.+++... ...+++..+..++.|++.||+|| |+.+|+|||++ +++|||.+........ .
T Consensus 82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~L---H~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~ 158 (327)
T cd08227 82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYI---HHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRL 158 (327)
T ss_pred CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH---HHCCEecCCCChhhEEEecCCcEEEcccchhhccccccccc
Confidence 999999999653 23588999999999999999999 57789999874 6788876544321111 0
Q ss_pred ----cccccccCCccccccccccc--CCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCcc-------
Q 001838 871 ----SMQTQTLATIGYMAPEYGVQ--GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPIS------- 937 (1007)
Q Consensus 871 ----~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~------- 937 (1007)
.......++..|+|||++.. ..++.++|||||||++|||++|+.||.......... .......+..
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 237 (327)
T cd08227 159 RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLL-EKLNGTVPCLLDTTTIP 237 (327)
T ss_pred cccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHH-HHhcCCccccccccchh
Confidence 01122356788999999876 458999999999999999999999997543221111 1111000000
Q ss_pred HHHH--------hhhhhcc---------ch--hhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 938 VMEV--------IDTNLLS---------GE--ERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 938 ~~~~--------~d~~~~~---------~~--~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
..+. .+..... .. ....+.......++.+++.+||+.||++|||++|+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~ 307 (327)
T cd08227 238 AEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 307 (327)
T ss_pred hhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcC
Confidence 0000 0000000 00 00000111224578899999999999999999999874
No 261
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.97 E-value=1.6e-30 Score=282.60 Aligned_cols=238 Identities=25% Similarity=0.372 Sum_probs=185.2
Q ss_pred cccccceecccCceEEEEEEEc-CCceEEEEEechhh---------HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCe
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---------ERALKSFQDECEVMKRIRHRNLVKIISACSNDDF 796 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---------~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 796 (1007)
+|.....||+|+||.||+|... +++.||+|.+.... .+..+.+.+|++++++++||||+++++++.+.+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 3667789999999999999865 58899999885321 1234678899999999999999999999999999
Q ss_pred eEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceec
Q 001838 797 KALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFL 864 (1007)
Q Consensus 797 ~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~ 864 (1007)
.++||||+++++|.+++.... .+++..+..++.|++.|++|| |+.+++|+++. ||+|||.++..
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~~l~~~l~~l---H~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~ 156 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNYG-AFEETLVRNFVRQILKGLNYL---HNRGIIHRDIKGANILVDNKGGIKISDFGISKKL 156 (267)
T ss_pred cEEEEEecCCCCHHHHHHhcc-CccHHHHHHHHHHHHHHHHHH---HhcCcccccCCHHHEEEcCCCCEEecccCCCccc
Confidence 999999999999999997653 478888999999999999999 56789999764 89999999877
Q ss_pred CCCCccc----ccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHH
Q 001838 865 NGQDQLS----MQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVME 940 (1007)
Q Consensus 865 ~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 940 (1007)
....... ......|+..|+|||++....++.++|||||||++|||++|+.||....... ... .
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~------------~ 223 (267)
T cd06628 157 EANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQ-AIF------------K 223 (267)
T ss_pred ccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHH-HHH------------H
Confidence 5321110 1123458889999999988889999999999999999999999997532110 000 0
Q ss_pred HhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 941 VIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 941 ~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
.... .. ...+......+.+++.+||+.||++||++.||++.
T Consensus 224 ~~~~-~~------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 264 (267)
T cd06628 224 IGEN-AS------PEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKH 264 (267)
T ss_pred Hhcc-CC------CcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence 0000 00 00011224568899999999999999999999863
No 262
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.97 E-value=1.6e-30 Score=282.91 Aligned_cols=240 Identities=21% Similarity=0.333 Sum_probs=186.5
Q ss_pred cccccceecccCceEEEEEEEcC--CceEEEEEechh----------hHHHHHHHHHHHHHHHh-cCCCceeEEEEEEec
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQD--GMEVAVKVFHQR----------YERALKSFQDECEVMKR-IRHRNLVKIISACSN 793 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~~--g~~vavK~~~~~----------~~~~~~~~~~E~~~l~~-l~H~niv~l~~~~~~ 793 (1007)
+|+..+.||+|+||.||+|.... ++.||+|.+... ......++..|+.++.+ ++||||+++++++.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 37778899999999999999764 688999987532 22344567889998876 689999999999999
Q ss_pred CCeeEEEEEecCCCChhHhhhc---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------ccccee
Q 001838 794 DDFKALIMEYMPNGSLENRLYS---GTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDF 858 (1007)
Q Consensus 794 ~~~~~lv~E~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DF 858 (1007)
.+..++||||+++++|.+++.. ....+++..+++++.|++.|+.||| ...+++|+++ +|++||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh--~~~~i~H~dl~~~nil~~~~~~~~l~df 158 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLH--KEKRIVHRDLTPNNIMLGEDDKVTITDF 158 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhc--cCCceeecCCCHHHEEECCCCcEEEecc
Confidence 9999999999999999988743 3345888999999999999999995 3468999976 489999
Q ss_pred ecceecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccH
Q 001838 859 SIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISV 938 (1007)
Q Consensus 859 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~ 938 (1007)
|.+....... ......|+..|+|||+.....++.++|||||||++|||++|+.||..... .......
T Consensus 159 g~~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~-----~~~~~~~----- 225 (269)
T cd08528 159 GLAKQKQPES---KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNM-----LSLATKI----- 225 (269)
T ss_pred cceeeccccc---ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCH-----HHHHHHH-----
Confidence 9998765332 22345689999999999888899999999999999999999999864211 1111110
Q ss_pred HHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 001838 939 MEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLL 990 (1007)
Q Consensus 939 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~ 990 (1007)
.+....... ......++.+++.+||+.||++||++.||.++++
T Consensus 226 ---~~~~~~~~~------~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 226 ---VEAVYEPLP------EGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred ---hhccCCcCC------cccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 000000000 0012346889999999999999999999999875
No 263
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.97 E-value=3.3e-30 Score=279.83 Aligned_cols=239 Identities=22% Similarity=0.302 Sum_probs=180.7
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechh-----hHHHHHHHHHHHHHHHhcCCCceeEEEEEEec--CCee
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQR-----YERALKSFQDECEVMKRIRHRNLVKIISACSN--DDFK 797 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~ 797 (1007)
.+|...+.||+|+||.||+|... +|..||+|++... ..+..+.+.+|+.++++++||||+++++++.+ ++..
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 36888999999999999999865 5899999988633 12345678899999999999999999998875 3578
Q ss_pred EEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecC
Q 001838 798 ALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLN 865 (1007)
Q Consensus 798 ~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~ 865 (1007)
++||||+++++|.+++.... .+++.....++.|++.||+|| |+.+|+|++++ ||+|||+++...
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~L---H~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~ 157 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYG-ALTESVTRKYTRQILEGMSYL---HSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQ 157 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HhCCeeeCCCCHHHEEECCCCCEEEccCCCccccc
Confidence 89999999999999997654 478888999999999999999 57789999653 899999998654
Q ss_pred CCCc-ccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhh
Q 001838 866 GQDQ-LSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDT 944 (1007)
Q Consensus 866 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~ 944 (1007)
.... ........++..|+|||++.+..++.++|||||||++|||++|+.||...... .. +... .
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~----~~-~~~~--------~-- 222 (266)
T cd06651 158 TICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAM----AA-IFKI--------A-- 222 (266)
T ss_pred cccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchH----HH-HHHH--------h--
Confidence 2111 11112345889999999998888999999999999999999999999753110 00 0000 0
Q ss_pred hhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 945 NLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 945 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
..... ...+......+.+++ .||..+|++||+|+||+++
T Consensus 223 -~~~~~---~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~h 261 (266)
T cd06651 223 -TQPTN---PQLPSHISEHARDFL-GCIFVEARHRPSAEELLRH 261 (266)
T ss_pred -cCCCC---CCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcC
Confidence 00000 000111223455565 6888999999999999763
No 264
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.97 E-value=7.3e-31 Score=288.68 Aligned_cols=254 Identities=23% Similarity=0.277 Sum_probs=180.4
Q ss_pred cccccceecccCceEEEEEEEc-CCceEEEEEechhh--HHHHHHHHHHHHHHHhc---CCCceeEEEEEEec-----CC
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY--ERALKSFQDECEVMKRI---RHRNLVKIISACSN-----DD 795 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~H~niv~l~~~~~~-----~~ 795 (1007)
+|...+.||+|+||+||+|+.. +|+.||+|.++... ......+.+|+++++++ +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4788899999999999999876 68999999987432 11123456677777665 69999999998864 24
Q ss_pred eeEEEEEecCCCChhHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecce
Q 001838 796 FKALIMEYMPNGSLENRLYSGT-CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAK 862 (1007)
Q Consensus 796 ~~~lv~E~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~ 862 (1007)
..++||||+++ +|.+++.... ..+++..+..++.|++.||+|| |+.+|+|+|++ ||+|||+++
T Consensus 81 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~l---H~~~ivH~dikp~Nili~~~~~~kl~dfg~~~ 156 (288)
T cd07863 81 KVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFL---HANCIVHRDLKPENILVTSGGQVKLADFGLAR 156 (288)
T ss_pred eEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEECCCCCEEECccCccc
Confidence 57999999984 8988887543 3488999999999999999999 57789999764 899999998
Q ss_pred ecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhc-Cc--cHH
Q 001838 863 FLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLL-PI--SVM 939 (1007)
Q Consensus 863 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~-~~--~~~ 939 (1007)
...... ......||..|+|||++.+..++.++||||+||++|||++|++||...... ..+.+...... +. ...
T Consensus 157 ~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~-~~~~~~~~~~~~~~~~~~~ 232 (288)
T cd07863 157 IYSCQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA-DQLGKIFDLIGLPPEDDWP 232 (288)
T ss_pred cccCcc---cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHH-HHHHHHHHHhCCCChhhCc
Confidence 764321 123456899999999998888999999999999999999999998653221 11111111110 00 000
Q ss_pred HHhh---hhhcc-chhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 940 EVID---TNLLS-GEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 940 ~~~d---~~~~~-~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
.... ..... .........+....++.+++.+|++.||++|||+.|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h 285 (288)
T cd07863 233 RDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH 285 (288)
T ss_pred ccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000 00000 0000001111234568899999999999999999999853
No 265
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.97 E-value=2e-30 Score=284.67 Aligned_cols=255 Identities=23% Similarity=0.248 Sum_probs=184.3
Q ss_pred cccccceecccCceEEEEEEEc-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEe
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY--ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEY 803 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~ 803 (1007)
+|+..+.||+|+||+||+|+.. +|..||||+++... ....+.+.+|+.++++++||||+++++++.+++..|+||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4778899999999999999875 68999999986432 22345678899999999999999999999999999999999
Q ss_pred cCCCChhHhhhcCC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCc
Q 001838 804 MPNGSLENRLYSGT--CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQ 869 (1007)
Q Consensus 804 ~~~gsL~~~l~~~~--~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~ 869 (1007)
++ |+|.+++.... ..+++..+..++.|++.||+|| |+.+|+|++++ ||+|||+++......
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~l---H~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~- 155 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFC---HSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV- 155 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHH---HhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCc-
Confidence 97 68988886432 4588999999999999999999 57899999763 899999998654221
Q ss_pred ccccccccCCcccccccccccC-CCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcC--cc----HH--H
Q 001838 870 LSMQTQTLATIGYMAPEYGVQG-RVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLP--IS----VM--E 940 (1007)
Q Consensus 870 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~--~~----~~--~ 940 (1007)
.......+++.|+|||++.+. .++.++|||||||++|||+||+.||....... ........... .. .. .
T Consensus 156 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 233 (285)
T cd07861 156 -RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEID-QLFRIFRILGTPTEDVWPGVTSLP 233 (285)
T ss_pred -ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHhCCCChhhhhcchhhH
Confidence 112334678899999987654 57899999999999999999999997532111 11111111000 00 00 0
Q ss_pred Hhhhhhccc-hhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 941 VIDTNLLSG-EERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 941 ~~d~~~~~~-~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
......... .............++.+++.+|++.||++|||+.||++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~ 282 (285)
T cd07861 234 DYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282 (285)
T ss_pred HHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 000000000 000000011234567899999999999999999999863
No 266
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.97 E-value=1.9e-30 Score=280.34 Aligned_cols=236 Identities=25% Similarity=0.324 Sum_probs=186.2
Q ss_pred cccccceecccCceEEEEEEEc-CCceEEEEEechhh-----HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEE
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY-----ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALI 800 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 800 (1007)
+|+..+.||+|+||+||+|... +++.||+|.+.... .+..+.+.+|++++++++||||+++++++...+..++|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4777899999999999999976 78999999886432 23457789999999999999999999999999999999
Q ss_pred EEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCC
Q 001838 801 MEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQD 868 (1007)
Q Consensus 801 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~ 868 (1007)
|||+++++|.+++.+.. .+++..+..++.|++.|++|| |+.+|+|+++ .||+|||++.......
T Consensus 81 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~ 156 (258)
T cd06632 81 LELVPGGSLAKLLKKYG-SFPEPVIRLYTRQILLGLEYL---HDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS 156 (258)
T ss_pred EEecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEECCCCCEEEccCccceeccccc
Confidence 99999999999997654 478899999999999999999 5678999865 3899999998764332
Q ss_pred cccccccccCCcccccccccccCC-CCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhc
Q 001838 869 QLSMQTQTLATIGYMAPEYGVQGR-VSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLL 947 (1007)
Q Consensus 869 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~ 947 (1007)
......|+..|+|||.+.... ++.++|||||||++|||++|+.||..... ......+..... .
T Consensus 157 ---~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~-~~~~~~~~~~~~-----------~- 220 (258)
T cd06632 157 ---FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG-VAAVFKIGRSKE-----------L- 220 (258)
T ss_pred ---cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcH-HHHHHHHHhccc-----------C-
Confidence 123456889999999987766 89999999999999999999999875321 000111100000 0
Q ss_pred cchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 948 SGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 948 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
...+.....++.+++.+||+.+|++||++.|+++.
T Consensus 221 ------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 255 (258)
T cd06632 221 ------PPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEH 255 (258)
T ss_pred ------CCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence 00011123467889999999999999999999863
No 267
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.97 E-value=5.9e-31 Score=288.74 Aligned_cols=256 Identities=20% Similarity=0.221 Sum_probs=184.7
Q ss_pred cccccceecccCceEEEEEEEc-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEe
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY--ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEY 803 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~ 803 (1007)
+|+..+.||+|+||+||+|+.. +|+.||+|+++... ......+.+|++++++++||||+++++++.+.+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 4778899999999999999976 68999999986432 22235677899999999999999999999999999999999
Q ss_pred cCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCccc
Q 001838 804 MPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLS 871 (1007)
Q Consensus 804 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~~~ 871 (1007)
++ |+|.+++......+++..+..++.||++||.|| |+.+|+|+++ +||+|||+++.......
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~L---H~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~-- 154 (284)
T cd07839 81 CD-QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFC---HSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVR-- 154 (284)
T ss_pred CC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCC--
Confidence 97 588888876555689999999999999999999 5678999976 38999999986532211
Q ss_pred ccccccCCcccccccccccC-CCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCcc------HHHHhhh
Q 001838 872 MQTQTLATIGYMAPEYGVQG-RVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPIS------VMEVIDT 944 (1007)
Q Consensus 872 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~------~~~~~d~ 944 (1007)
......+++.|+|||++.+. .++.++|||||||++|||+||+.|+.........+........... ..+..+.
T Consensus 155 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd07839 155 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDY 234 (284)
T ss_pred CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccc
Confidence 12334678899999987664 4799999999999999999999986532221111111111110000 0000000
Q ss_pred hhccchh---hhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 945 NLLSGEE---RYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 945 ~~~~~~~---~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
....... ...........++.+++.+||+.||++|||+.|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h 281 (284)
T cd07839 235 KPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH 281 (284)
T ss_pred cccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence 0000000 0000111234578899999999999999999999863
No 268
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.97 E-value=1.5e-30 Score=285.91 Aligned_cols=256 Identities=23% Similarity=0.276 Sum_probs=187.6
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY--ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIME 802 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E 802 (1007)
++|+..+.||+|+||.||+|+.+ +|+.||+|++.... ....+.+.+|++++++++||||+++++++..++..++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 46888999999999999999976 58999999986432 2233567899999999999999999999999999999999
Q ss_pred ecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCcc
Q 001838 803 YMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQL 870 (1007)
Q Consensus 803 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~~ 870 (1007)
|++++.+..++.... .+++..+..++.|++.||+|| |+.+++|+++ +||+|||++........
T Consensus 81 ~~~~~~l~~~~~~~~-~~~~~~~~~~~~ql~~~l~~L---H~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~- 155 (286)
T cd07847 81 YCDHTVLNELEKNPR-GVPEHLIKKIIWQTLQAVNFC---HKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD- 155 (286)
T ss_pred ccCccHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHH---HHCCceecCCChhhEEEcCCCcEEECccccceecCCCcc-
Confidence 999998888775443 489999999999999999999 5688999865 38999999997754321
Q ss_pred cccccccCCccccccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcC--ccHHHHhhhhh-
Q 001838 871 SMQTQTLATIGYMAPEYGVQ-GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLP--ISVMEVIDTNL- 946 (1007)
Q Consensus 871 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~--~~~~~~~d~~~- 946 (1007)
......++..|+|||++.+ ..++.++|||||||++|||++|+.||.+....+ ....+...... ....+..+...
T Consensus 156 -~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (286)
T cd07847 156 -DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVD-QLYLIRKTLGDLIPRHQQIFSTNQF 233 (286)
T ss_pred -cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCChHHhhhcccccc
Confidence 1223457889999998766 457899999999999999999999997533211 11111111000 00001110000
Q ss_pred -----ccch---hhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 947 -----LSGE---ERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 947 -----~~~~---~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
.... .............+.+++.+||+.+|++|||+.|++.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 283 (286)
T cd07847 234 FKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH 283 (286)
T ss_pred cccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence 0000 00000011224568999999999999999999999863
No 269
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.97 E-value=1.4e-30 Score=286.78 Aligned_cols=238 Identities=24% Similarity=0.313 Sum_probs=188.6
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEec
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYM 804 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~ 804 (1007)
++|...+.||+|+||+||+|... +++.||+|.+........+.+.+|+.++++++||||++++++|...+..|+|+||+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 98 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL 98 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence 57888999999999999999864 68899999987554444577899999999999999999999999999999999999
Q ss_pred CCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCcccc
Q 001838 805 PNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLSM 872 (1007)
Q Consensus 805 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~~~~ 872 (1007)
++|+|.+++.+. .+++..+..++.|++.|+.|| |+.+++|+++ .||+|||++........ .
T Consensus 99 ~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~L---H~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~--~ 171 (293)
T cd06647 99 AGGSLTDVVTET--CMDEGQIAAVCRECLQALEFL---HSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS--K 171 (293)
T ss_pred CCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHH---HhCCEeeccCCHHHEEEcCCCCEEEccCcceeccccccc--c
Confidence 999999999764 378889999999999999999 5778999965 38999999886643322 1
Q ss_pred cccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhh
Q 001838 873 QTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEER 952 (1007)
Q Consensus 873 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~ 952 (1007)
.....|++.|+|||.+....++.++|||||||++||+++|+.||............+... ..
T Consensus 172 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~------------------~~ 233 (293)
T cd06647 172 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNG------------------TP 233 (293)
T ss_pred cccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCC------------------CC
Confidence 123468899999999888889999999999999999999999997532211100000000 00
Q ss_pred hHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 953 YFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 953 ~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
...........+.+++.+||+.+|++||++.|++.+
T Consensus 234 ~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 234 ELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000111223468899999999999999999999976
No 270
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.97 E-value=2.1e-30 Score=294.63 Aligned_cols=254 Identities=20% Similarity=0.218 Sum_probs=185.0
Q ss_pred hcccccccceecccCceEEEEEEEc-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecC------
Q 001838 724 ATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY--ERALKSFQDECEVMKRIRHRNLVKIISACSND------ 794 (1007)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------ 794 (1007)
..++|...+.||+|+||.||+|... .++.||||++.... ....+.+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 4578999999999999999999865 58899999997532 33446788999999999999999999988643
Q ss_pred CeeEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecce
Q 001838 795 DFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAK 862 (1007)
Q Consensus 795 ~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~ 862 (1007)
...|+||||+++ ++.+.+.. .+++..+..++.|++.||+|| |+.+|+|||++ ||+|||+++
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~qi~~aL~~L---H~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 174 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHL---HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHHh---cCCHHHHHHHHHHHHHHHHHH---hhCCeecCCCCHHHEEECCCCcEEEEeCCCcc
Confidence 357999999975 77777753 378888999999999999999 67899999764 899999998
Q ss_pred ecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcC--ccHHH
Q 001838 863 FLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLP--ISVME 940 (1007)
Q Consensus 863 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~--~~~~~ 940 (1007)
...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+ .....+..... .....
T Consensus 175 ~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~ 250 (364)
T cd07875 175 TAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID-QWNKVIEQLGTPCPEFMK 250 (364)
T ss_pred ccCCCC---cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHH
Confidence 754321 1234568999999999999899999999999999999999999997532111 11111111110 01111
Q ss_pred Hhhhhhcc------ch-----hh---------hHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 941 VIDTNLLS------GE-----ER---------YFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 941 ~~d~~~~~------~~-----~~---------~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
.+.+.... .. .. ..........++.+++.+|++.||++|||+.|++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 251 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred hhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 11100000 00 00 000000112468899999999999999999999986
No 271
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.97 E-value=1.2e-30 Score=281.48 Aligned_cols=237 Identities=21% Similarity=0.344 Sum_probs=187.9
Q ss_pred cccccceecccCceEEEEEEEc-CCceEEEEEechh--hHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEe
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQR--YERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEY 803 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~ 803 (1007)
+|+..+.||+|+||.||+++.. +|+.||+|++... .....+++.+|+.++++++||||+++++++...+..++||||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 4788899999999999999865 6899999998743 234456789999999999999999999999999999999999
Q ss_pred cCCCChhHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCcc
Q 001838 804 MPNGSLENRLYSGT-CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQL 870 (1007)
Q Consensus 804 ~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~~ 870 (1007)
+++++|.+++.... ..+++.++.+++.|++.|+.|| |+.+++|+++ ++++|||++.........
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l---h~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~ 157 (256)
T cd08218 81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHV---HDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVEL 157 (256)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhh
Confidence 99999999987543 3578899999999999999999 5678999855 489999999876432211
Q ss_pred cccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccch
Q 001838 871 SMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGE 950 (1007)
Q Consensus 871 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~ 950 (1007)
.....|++.|+|||+..+..++.++|||||||++|||++|+.||..... ...+ +.......
T Consensus 158 --~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~-----~~~~------------~~~~~~~~ 218 (256)
T cd08218 158 --ARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNM-----KNLV------------LKIIRGSY 218 (256)
T ss_pred --hhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCH-----HHHH------------HHHhcCCC
Confidence 1234588899999999888899999999999999999999999864211 1111 11110000
Q ss_pred hhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 951 ERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 951 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
. +.+.....++.+++.+||+.+|++||+|.||+++
T Consensus 219 ~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 219 P---PVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred C---CCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 0 0111224568999999999999999999999874
No 272
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.97 E-value=1.4e-30 Score=286.93 Aligned_cols=249 Identities=23% Similarity=0.302 Sum_probs=190.0
Q ss_pred ccHHHHHHhcccccccceecccCceEEEEEEEc-CCceEEEEEechhhHHHHHHHHHHHHHHHhc-CCCceeEEEEEEec
Q 001838 716 FSYHELLQATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKSFQDECEVMKRI-RHRNLVKIISACSN 793 (1007)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~ 793 (1007)
+.++++..++++|...+.||+|+||.||+|... +++.||+|++..... ....+.+|+.+++++ +||||+++++++..
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~ 90 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISD-VDEEIEAEYNILQSLPNHPNVVKFYGMFYK 90 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccccc-HHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence 455677778999999999999999999999875 688999999865422 235677899999999 79999999999875
Q ss_pred C-----CeeEEEEEecCCCChhHhhhc---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------c
Q 001838 794 D-----DFKALIMEYMPNGSLENRLYS---GTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------A 853 (1007)
Q Consensus 794 ~-----~~~~lv~E~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~ 853 (1007)
. +..++||||+++|+|.++++. ....+++..+..++.|++.||+|| |+.+++|+++ +
T Consensus 91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~l---H~~~ivH~dlkp~nili~~~~~~ 167 (291)
T cd06639 91 ADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHL---HNNRIIHRDVKGNNILLTTEGGV 167 (291)
T ss_pred ccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeccCCCHHHEEEcCCCCE
Confidence 3 358999999999999998863 234588999999999999999999 5679999865 3
Q ss_pred ccceeecceecCCCCcccccccccCCcccccccccccC-----CCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHH
Q 001838 854 HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQG-----RVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSR 928 (1007)
Q Consensus 854 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~ 928 (1007)
||+|||+++........ .....|+..|+|||++... .++.++|||||||++|||++|+.||...... ..+.+
T Consensus 168 kl~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~-~~~~~ 244 (291)
T cd06639 168 KLVDFGVSAQLTSTRLR--RNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPV-KTLFK 244 (291)
T ss_pred EEeecccchhccccccc--ccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHH-HHHHH
Confidence 89999999876432211 1234688999999987543 3689999999999999999999998753211 11111
Q ss_pred HHHhhcCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 929 WVNDLLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 929 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
+.... +.. . ..++.....+.+++.+|++.+|++||++.|++++
T Consensus 245 ~~~~~-~~~--------~--------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 245 IPRNP-PPT--------L--------LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred HhcCC-CCC--------C--------CcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 11000 000 0 0011223468899999999999999999999864
No 273
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.97 E-value=5e-30 Score=278.15 Aligned_cols=240 Identities=20% Similarity=0.281 Sum_probs=188.6
Q ss_pred cccccceecccCceEEEEEEEc-CCceEEEEEechh--hHHHHHHHHHHHHHHHhcCCCceeEEEEEEec--CCeeEEEE
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQR--YERALKSFQDECEVMKRIRHRNLVKIISACSN--DDFKALIM 801 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~lv~ 801 (1007)
+|+..+.+|.|+||.||+|... +|+.||+|++... .....+++..|++++++++||||+++++++.. ....++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 4778899999999999999865 6889999998643 23445678899999999999999999998864 44689999
Q ss_pred EecCCCChhHhhhcC---CCCCCHHHHHHHHHHHHHHHHHHHhcC--CCCceeccc------------cccceeecceec
Q 001838 802 EYMPNGSLENRLYSG---TCMLDIFQRLNIMIDVALALEYLHFGH--STPIIHYMV------------AHISDFSIAKFL 864 (1007)
Q Consensus 802 E~~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~~l~yLH~~~--~~~ivH~~~------------~kl~DFGla~~~ 864 (1007)
||+++|+|.+++... ...+++..+..++.|++.|++|||..+ +.+++|+++ .|++|||+++..
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence 999999999999653 346899999999999999999996443 889999865 389999999977
Q ss_pred CCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhh
Q 001838 865 NGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDT 944 (1007)
Q Consensus 865 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~ 944 (1007)
...... .....|++.|+|||++....++.++|||||||++|+|++|+.||.... .....+.+...
T Consensus 161 ~~~~~~--~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--~~~~~~~~~~~----------- 225 (265)
T cd08217 161 GHDSSF--AKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN--QLQLASKIKEG----------- 225 (265)
T ss_pred cCCccc--ccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC--HHHHHHHHhcC-----------
Confidence 543221 233468999999999988889999999999999999999999997532 11111111110
Q ss_pred hhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 945 NLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 945 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
... ..+.....++.+++.+|++.+|++|||+.||+++
T Consensus 226 -~~~------~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 226 -KFR------RIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred -CCC------CCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 000 0111234578999999999999999999999874
No 274
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.97 E-value=1.8e-30 Score=280.71 Aligned_cols=226 Identities=25% Similarity=0.417 Sum_probs=176.9
Q ss_pred ceecccCceEEEEEEEcC-C----------ceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEE
Q 001838 732 NLLGIGSFGSVYVARLQD-G----------MEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALI 800 (1007)
Q Consensus 732 ~~ig~G~~g~Vy~~~~~~-g----------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 800 (1007)
+.||+|+||.||+|...+ + ..||+|++...... ...+.+|+.++++++||||+++++++.. ...++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence 468999999999998764 3 25788887654433 5788999999999999999999999988 778999
Q ss_pred EEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc-------------------cccceeecc
Q 001838 801 MEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV-------------------AHISDFSIA 861 (1007)
Q Consensus 801 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~-------------------~kl~DFGla 861 (1007)
|||+++|+|.+++......+++..+..++.|++.||+|| |+.+|+|+|+ .|++|||++
T Consensus 79 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~L---H~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a 155 (259)
T cd05037 79 EEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYL---EDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIP 155 (259)
T ss_pred EEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHH---hhCCeecccCccceEEEecCccccCCceeEEeCCCCcc
Confidence 999999999999987665689999999999999999999 5789999843 479999999
Q ss_pred eecCCCCcccccccccCCcccccccccccC--CCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccH
Q 001838 862 KFLNGQDQLSMQTQTLATIGYMAPEYGVQG--RVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISV 938 (1007)
Q Consensus 862 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~ 938 (1007)
+..... ....++..|+|||++... .++.++|||||||++|||++ |..|+...... ....+...
T Consensus 156 ~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~--~~~~~~~~------ 221 (259)
T cd05037 156 ITVLSR------EERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSS--EKERFYQD------ 221 (259)
T ss_pred cccccc------cccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCch--hHHHHHhc------
Confidence 875431 223467789999998776 78999999999999999999 57777653211 11111110
Q ss_pred HHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 001838 939 MEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLL 990 (1007)
Q Consensus 939 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~ 990 (1007)
....... ...++.+++.+||..+|++|||+.||++.|.
T Consensus 222 -----~~~~~~~---------~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 222 -----QHRLPMP---------DCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred -----CCCCCCC---------CchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 0000000 0146889999999999999999999998873
No 275
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.97 E-value=1.3e-30 Score=281.32 Aligned_cols=236 Identities=23% Similarity=0.367 Sum_probs=187.6
Q ss_pred cccccceecccCceEEEEEEEc-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEe
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY--ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEY 803 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~ 803 (1007)
+|+..+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++.+..++..++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 4788899999999999999865 68899999986542 33457889999999999999999999999999999999999
Q ss_pred cCCCChhHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc-------------cccceeecceecCCCCc
Q 001838 804 MPNGSLENRLYSGT-CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV-------------AHISDFSIAKFLNGQDQ 869 (1007)
Q Consensus 804 ~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~-------------~kl~DFGla~~~~~~~~ 869 (1007)
+++++|.+++.... ..+++..+.+++.|+++|++|| |+.+++|+++ +|++|||.++.......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l---h~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~ 157 (256)
T cd08220 81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHV---HTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSK 157 (256)
T ss_pred CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcc
Confidence 99999999997643 3578999999999999999999 5779999854 37999999987653321
Q ss_pred ccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccc
Q 001838 870 LSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSG 949 (1007)
Q Consensus 870 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~ 949 (1007)
.....|+..|+|||.+....++.++|||||||++|||++|+.||+..... ........ ....
T Consensus 158 ---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~--~~~~~~~~-----------~~~~-- 219 (256)
T cd08220 158 ---AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP--ALVLKIMS-----------GTFA-- 219 (256)
T ss_pred ---ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchH--HHHHHHHh-----------cCCC--
Confidence 12346889999999998888999999999999999999999998753211 11111100 0000
Q ss_pred hhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 950 EERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 950 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
+.+.....++.+++.+||+.+|++|||+.|++++
T Consensus 220 -----~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 220 -----PISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred -----CCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 0001123468899999999999999999999864
No 276
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.97 E-value=7.2e-30 Score=280.48 Aligned_cols=245 Identities=23% Similarity=0.256 Sum_probs=187.1
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecC--CeeEEEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVKIISACSND--DFKALIM 801 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lv~ 801 (1007)
++|...+.||.|++|.||+|... +++.||+|++.... .....++.+|++++++++||||++++++|.+. +..++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 46788899999999999999975 58899999987543 24457789999999999999999999998654 4689999
Q ss_pred EecCCCChhHhhhc---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCC
Q 001838 802 EYMPNGSLENRLYS---GTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNG 866 (1007)
Q Consensus 802 E~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~ 866 (1007)
||+++|+|.+++.. ....++......++.|++.||.|| |+.+++|+++ ++++|||++.....
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~l---H~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 157 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYL---HSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVN 157 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence 99999999988753 234578888999999999999999 5788999865 38999999876542
Q ss_pred CCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCcccc---CcchHHHHHHhhcCccHHHHhh
Q 001838 867 QDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFI---GELSLSRWVNDLLPISVMEVID 943 (1007)
Q Consensus 867 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~---~~~~l~~~~~~~~~~~~~~~~d 943 (1007)
... ....++..|+|||.+.+..++.++||||+||++|||++|+.||+.... .......|..........+..
T Consensus 158 ~~~----~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 232 (287)
T cd06621 158 SLA----GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEP- 232 (287)
T ss_pred ccc----ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCC-
Confidence 211 234578899999999888999999999999999999999999985422 111222222211000000000
Q ss_pred hhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 001838 944 TNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGL 989 (1007)
Q Consensus 944 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L 989 (1007)
........++.+++.+||+.+|++|||+.|+++.-
T Consensus 233 -----------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~ 267 (287)
T cd06621 233 -----------GNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHP 267 (287)
T ss_pred -----------CCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCc
Confidence 00001234688999999999999999999999853
No 277
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.97 E-value=1.6e-30 Score=282.11 Aligned_cols=242 Identities=24% Similarity=0.277 Sum_probs=190.4
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEe
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEY 803 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~ 803 (1007)
++|+..+.||+|+||.||+|... +++.||+|++.... ....+++.+|++++++++||||+++++++...+..++|+||
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY 80 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence 35777889999999999999876 58999999987553 34456789999999999999999999999999999999999
Q ss_pred cCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCC-CCceecccc------------ccceeecceecCCCCcc
Q 001838 804 MPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHS-TPIIHYMVA------------HISDFSIAKFLNGQDQL 870 (1007)
Q Consensus 804 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~-~~ivH~~~~------------kl~DFGla~~~~~~~~~ 870 (1007)
+++++|.+++......++.....+++.|++.|++|| |+ .+++|+++. ||+|||.+........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l---H~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~- 156 (265)
T cd06605 81 MDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYL---HEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLA- 156 (265)
T ss_pred cCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHH---cCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHh-
Confidence 999999999987645688899999999999999999 56 899999763 8999999876632211
Q ss_pred cccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccch
Q 001838 871 SMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGE 950 (1007)
Q Consensus 871 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~ 950 (1007)
....++..|+|||++.+..++.++|||||||++|+|++|+.||.............+... .....
T Consensus 157 ---~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~------------~~~~~ 221 (265)
T cd06605 157 ---KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYI------------VNEPP 221 (265)
T ss_pred ---hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHH------------hcCCC
Confidence 125688899999999888999999999999999999999999975422111111111111 00000
Q ss_pred hhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 951 ERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 951 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
.... ......++.+++.+||..+|++|||+.|++.+
T Consensus 222 ~~~~--~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 222 PRLP--SGKFSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred CCCC--hhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 0000 00134568899999999999999999999865
No 278
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.97 E-value=3.1e-30 Score=281.15 Aligned_cols=243 Identities=24% Similarity=0.352 Sum_probs=184.7
Q ss_pred cccccceecccCceEEEEEEEc-CCceEEEEEechhh----------HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCC
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY----------ERALKSFQDECEVMKRIRHRNLVKIISACSNDD 795 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~----------~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~ 795 (1007)
+|...+.||+|+||.||+|... +|+.||||.++... ....+.+.+|+.++++++||||+++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 4677889999999999999865 68999999885321 112356888999999999999999999999999
Q ss_pred eeEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeeccee
Q 001838 796 FKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKF 863 (1007)
Q Consensus 796 ~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~ 863 (1007)
..++||||+++|+|.+++.+.. .+++..+..++.|++.|+.|| |+.+++|+++. +++|||+++.
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~ 157 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTYG-RFEEQLVRFFTEQVLEGLAYL---HSKGILHRDLKADNLLVDADGICKISDFGISKK 157 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHH---hhCCeeecCCChhhEEEcCCCeEEEeecccccc
Confidence 9999999999999999997653 588889999999999999999 56789999763 8999999986
Q ss_pred cCCCCcccccccccCCcccccccccccCC--CCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHH
Q 001838 864 LNGQDQLSMQTQTLATIGYMAPEYGVQGR--VSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEV 941 (1007)
Q Consensus 864 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 941 (1007)
..............|+..|+|||++.... ++.++|||||||++||+++|+.||..... ...+.... .......
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~----~~~~~~~~-~~~~~~~ 232 (272)
T cd06629 158 SDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA----IAAMFKLG-NKRSAPP 232 (272)
T ss_pred ccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcch----HHHHHHhh-ccccCCc
Confidence 54322111223456889999999887654 89999999999999999999999864211 11111100 0000000
Q ss_pred hhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 942 IDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 942 ~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
++. ......+.++.+++.+|+..+|++|||+.||+++
T Consensus 233 ~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 233 IPP----------DVSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred CCc----------cccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 000 0011224578899999999999999999999864
No 279
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.97 E-value=2.3e-30 Score=281.39 Aligned_cols=239 Identities=18% Similarity=0.298 Sum_probs=172.3
Q ss_pred eecccCceEEEEEEEcCC---ceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecCCCC
Q 001838 733 LLGIGSFGSVYVARLQDG---MEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGS 808 (1007)
Q Consensus 733 ~ig~G~~g~Vy~~~~~~g---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~gs 808 (1007)
.||+|+||+||+|...++ ..+++|.++... ....+.+.+|+.+++.++||||++++++|.+....|+||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 589999999999975543 346677665432 3445789999999999999999999999999999999999999999
Q ss_pred hhHhhhcCC---CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCccccc
Q 001838 809 LENRLYSGT---CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQ 873 (1007)
Q Consensus 809 L~~~l~~~~---~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~~ 873 (1007)
|.+++.+.. ...++.....++.||++||+|| |+.+++|+|++ |++|||++............
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~l---H~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 158 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHM---HKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETE 158 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHH---HHCCeeccCCccceEEEcCCccEEecccccccccCcchhhhcc
Confidence 999997532 2456677788999999999999 46789999764 89999998754322211122
Q ss_pred ccccCCccccccccccc-------CCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHHHHhhhh
Q 001838 874 TQTLATIGYMAPEYGVQ-------GRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTN 945 (1007)
Q Consensus 874 ~~~~gt~~y~aPE~~~~-------~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~ 945 (1007)
....|+..|+|||++.. ..++.++|||||||++|||++ |..||...... +..............++.
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~ 233 (268)
T cd05086 159 DDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDR-----EVLNHVIKDQQVKLFKPQ 233 (268)
T ss_pred cCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHhhcccccCCCc
Confidence 34568889999998743 245789999999999999997 56787643211 111111000001111111
Q ss_pred hccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 001838 946 LLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLL 990 (1007)
Q Consensus 946 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~ 990 (1007)
+.. .....+.+++..|| .+|++||+|+||++.|.
T Consensus 234 ~~~----------~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 234 LEL----------PYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred cCC----------CCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 110 11235777888999 67999999999998874
No 280
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.97 E-value=2.5e-30 Score=279.35 Aligned_cols=237 Identities=23% Similarity=0.364 Sum_probs=186.1
Q ss_pred cccccceecccCceEEEEEEEc-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeEEEEEEec-CCeeEEEEE
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY--ERALKSFQDECEVMKRIRHRNLVKIISACSN-DDFKALIME 802 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~~~lv~E 802 (1007)
+|+..+.||+|++|.||++... +++.||+|++.... ....+.+.+|++++++++|||++++++.+.. ....|+|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4788899999999999999865 57899999986542 3445678899999999999999999998764 446899999
Q ss_pred ecCCCChhHhhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCc
Q 001838 803 YMPNGSLENRLYSG-TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQ 869 (1007)
Q Consensus 803 ~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~ 869 (1007)
|+++++|.+++... ...+++.++..++.|++.|++|| |+.+++|+++. +|+|||+++.......
T Consensus 81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~l---H~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~ 157 (257)
T cd08223 81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYL---HEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCD 157 (257)
T ss_pred ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeccCCCchhEEEecCCcEEEecccceEEecccCC
Confidence 99999999999764 33589999999999999999999 57789999764 7999999987643221
Q ss_pred ccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccc
Q 001838 870 LSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSG 949 (1007)
Q Consensus 870 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~ 949 (1007)
......|++.|+|||+.....++.++|||||||++|||++|+.||+.... ..+....... .. .
T Consensus 158 --~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~-----~~~~~~~~~~--------~~-~- 220 (257)
T cd08223 158 --MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDM-----NSLVYRIIEG--------KL-P- 220 (257)
T ss_pred --ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH-----HHHHHHHHhc--------CC-C-
Confidence 22345688999999999888899999999999999999999999874321 1111110000 00 0
Q ss_pred hhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 950 EERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 950 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
..+.....++.+++.+|++.+|++|||+.|++++
T Consensus 221 -----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 221 -----PMPKDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred -----CCccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0011223568899999999999999999999864
No 281
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.97 E-value=9e-31 Score=288.06 Aligned_cols=236 Identities=22% Similarity=0.305 Sum_probs=184.7
Q ss_pred ccccceecccCceEEEEEEEc-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecCC
Q 001838 728 FSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPN 806 (1007)
Q Consensus 728 ~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~ 806 (1007)
|.....||+|+||.||++... ++..||||.+........+.+.+|+.++++++||||+++++++..++..|+||||+++
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~ 103 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEG 103 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCC
Confidence 344567999999999999865 5889999998765555567789999999999999999999999999999999999999
Q ss_pred CChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcccccc
Q 001838 807 GSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQT 874 (1007)
Q Consensus 807 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~~~ 874 (1007)
++|.+++... .+++..+..++.||+.|++|| |+.+|+|++++ ||+|||++........ ...
T Consensus 104 ~~L~~~~~~~--~l~~~~~~~~~~qi~~~l~~L---H~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~--~~~ 176 (292)
T cd06658 104 GALTDIVTHT--RMNEEQIATVCLSVLRALSYL---HNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP--KRK 176 (292)
T ss_pred CcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHH---HHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccc--cCc
Confidence 9999988654 378899999999999999999 56789999764 8999999976543221 123
Q ss_pred cccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhhH
Q 001838 875 QTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYF 954 (1007)
Q Consensus 875 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 954 (1007)
...|+..|+|||+.....++.++|||||||++|||++|+.||...... ....-+. ..+.....
T Consensus 177 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~--~~~~~~~--------~~~~~~~~------- 239 (292)
T cd06658 177 SLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPL--QAMRRIR--------DNLPPRVK------- 239 (292)
T ss_pred eeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHH--------hcCCCccc-------
Confidence 356899999999998888999999999999999999999998742110 0000000 00000000
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 955 AAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 955 ~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
........+.+++.+|+..||++|||+.|+++.
T Consensus 240 -~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 240 -DSHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred -cccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 001123457889999999999999999999975
No 282
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.97 E-value=2.1e-30 Score=283.99 Aligned_cols=248 Identities=21% Similarity=0.285 Sum_probs=189.0
Q ss_pred ccHHHHHHhcccccccceecccCceEEEEEEEc-CCceEEEEEechhhHHHHHHHHHHHHHHHhc-CCCceeEEEEEEec
Q 001838 716 FSYHELLQATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKSFQDECEVMKRI-RHRNLVKIISACSN 793 (1007)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~ 793 (1007)
.++.++..+.+.|+..+.||+|+||.||+|+.. +++.||+|++.... ....++..|+.+++++ +||||+++++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 84 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIK 84 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence 456677777889999999999999999999875 58899999986543 2335688899999998 69999999999853
Q ss_pred ------CCeeEEEEEecCCCChhHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------c
Q 001838 794 ------DDFKALIMEYMPNGSLENRLYSGT-CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------H 854 (1007)
Q Consensus 794 ------~~~~~lv~E~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------k 854 (1007)
.+..|+||||+++|+|.+++.... ..+++..+..++.|++.|++|| |+.+|+|+++. +
T Consensus 85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~L---H~~~ivH~dl~~~nili~~~~~~~ 161 (282)
T cd06636 85 KSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHL---HAHKVIHRDIKGQNVLLTENAEVK 161 (282)
T ss_pred ccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEECCCCCEE
Confidence 457899999999999999987532 3478888889999999999999 56789999663 8
Q ss_pred cceeecceecCCCCcccccccccCCcccccccccc-----cCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHH
Q 001838 855 ISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGV-----QGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRW 929 (1007)
Q Consensus 855 l~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~ 929 (1007)
|+|||+++....... ......|++.|+|||.+. ...++.++|||||||++|||++|+.||..........
T Consensus 162 l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~--- 236 (282)
T cd06636 162 LVDFGVSAQLDRTVG--RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALF--- 236 (282)
T ss_pred EeeCcchhhhhcccc--CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhh---
Confidence 999999886532211 123356899999999875 3458889999999999999999999986532110000
Q ss_pred HHhhcCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 930 VNDLLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 930 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
. +....... ......+.++.+++.+||+.||++|||+.|+++.
T Consensus 237 ----------~-~~~~~~~~-----~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~ 279 (282)
T cd06636 237 ----------L-IPRNPPPK-----LKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKH 279 (282)
T ss_pred ----------h-HhhCCCCC-----CcccccCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence 0 00000000 0011224568999999999999999999999763
No 283
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.97 E-value=1.3e-30 Score=284.52 Aligned_cols=242 Identities=24% Similarity=0.396 Sum_probs=188.9
Q ss_pred ccccccceecccCceEEEEEEEc------CCceEEEEEechhhHH-HHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ------DGMEVAVKVFHQRYER-ALKSFQDECEVMKRIRHRNLVKIISACSNDDFKA 798 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 798 (1007)
++|+..+.||+|+||+||+|+.+ +.+.||+|.+...... ..+.+.+|++++++++||||+++++++.+.+..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 46888999999999999999864 2467999998765433 5678999999999999999999999999999999
Q ss_pred EEEEecCCCChhHhhhcCC--------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------cccee
Q 001838 799 LIMEYMPNGSLENRLYSGT--------CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDF 858 (1007)
Q Consensus 799 lv~E~~~~gsL~~~l~~~~--------~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DF 858 (1007)
+||||+++|+|.+++.... ..+++..+..++.|++.||+|| |+.+|+|+|++ +++||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~L---H~~~i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHL---SNARFVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHh---hhcCcccCcCccceEEEeCCCcEEEccc
Confidence 9999999999999997543 1589999999999999999999 67789999764 79999
Q ss_pred ecceecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCcc
Q 001838 859 SIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPIS 937 (1007)
Q Consensus 859 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~ 937 (1007)
|+++....... .......++..|+|||.+....++.++|||||||++|||++ |..||...... ........
T Consensus 162 ~~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~--~~~~~~~~----- 233 (275)
T cd05046 162 SLSKDVYNSEY-YKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE--EVLNRLQA----- 233 (275)
T ss_pred ccccccCcccc-cccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH--HHHHHHHc-----
Confidence 99876532221 12233456788999999888889999999999999999999 78888643211 11111110
Q ss_pred HHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 001838 938 VMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLL 990 (1007)
Q Consensus 938 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~ 990 (1007)
...... .....+..+.+++.+||+.+|++|||+.|++++|.
T Consensus 234 ------~~~~~~------~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 234 ------GKLELP------VPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred ------CCcCCC------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 000000 00112346899999999999999999999999885
No 284
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.97 E-value=2.8e-30 Score=280.61 Aligned_cols=245 Identities=25% Similarity=0.337 Sum_probs=190.1
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEe
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEY 803 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~ 803 (1007)
++|+..+.||.|+||+||+|... ++..||+|++.... ....+.+.+|+++++.++|+||+++++.+..++..++||||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 46888999999999999999865 58899999986432 23557789999999999999999999999999999999999
Q ss_pred cCCCChhHhhhcC--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCc
Q 001838 804 MPNGSLENRLYSG--TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQ 869 (1007)
Q Consensus 804 ~~~gsL~~~l~~~--~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~ 869 (1007)
+++++|.+++... ...+++.....++.|++.|++|| |+.+++|+++. |++|||++........
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~l---h~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~ 157 (267)
T cd06610 81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYL---HSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD 157 (267)
T ss_pred cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence 9999999999754 24588999999999999999999 57889999653 8999999987654322
Q ss_pred cc--ccccccCCcccccccccccC-CCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhh
Q 001838 870 LS--MQTQTLATIGYMAPEYGVQG-RVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNL 946 (1007)
Q Consensus 870 ~~--~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~ 946 (1007)
.. ......|+..|+|||++... .++.++|||||||++|||++|+.||......+ ...+...... . ..
T Consensus 158 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~-~~~~~~~~~~-~--------~~ 227 (267)
T cd06610 158 RTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK-VLMLTLQNDP-P--------SL 227 (267)
T ss_pred ccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh-hHHHHhcCCC-C--------Cc
Confidence 21 12334688999999998777 78999999999999999999999997532211 1111111100 0 00
Q ss_pred ccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 947 LSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 947 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
.... .....+.++.+++.+|++.||++||++.|+++.
T Consensus 228 ~~~~-----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 228 ETGA-----DYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred CCcc-----ccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 0000 011224568899999999999999999999863
No 285
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.97 E-value=1.3e-30 Score=286.28 Aligned_cols=256 Identities=23% Similarity=0.310 Sum_probs=187.2
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY--ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIME 802 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E 802 (1007)
++|+..+.||+|+||.||+|..+ +++.||+|++.... ....+.+.+|++++++++||||+++++++..++..|+|||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 46888899999999999999976 58999999986542 2234678899999999999999999999999999999999
Q ss_pred ecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCcc
Q 001838 803 YMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQL 870 (1007)
Q Consensus 803 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~~ 870 (1007)
|++++++.++..... .+++..+..++.|+++|++||| +.+++|+++ .+++|||+++.......
T Consensus 81 ~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH---~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~- 155 (286)
T cd07846 81 FVDHTVLDDLEKYPN-GLDESRVRKYLFQILRGIEFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE- 155 (286)
T ss_pred cCCccHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCcc-
Confidence 999999988776543 4899999999999999999994 678999865 48999999987643321
Q ss_pred cccccccCCccccccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCCccccCcc--hHHHHHHhhcCccHHHHhhhh--
Q 001838 871 SMQTQTLATIGYMAPEYGVQ-GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGEL--SLSRWVNDLLPISVMEVIDTN-- 945 (1007)
Q Consensus 871 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~--~l~~~~~~~~~~~~~~~~d~~-- 945 (1007)
......++..|+|||+..+ ..++.++|||||||++|||++|++||......+. .+..+... ......+..+..
T Consensus 156 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 233 (286)
T cd07846 156 -VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGN-LIPRHQEIFQKNPL 233 (286)
T ss_pred -ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCC-CchhhHHHhccchH
Confidence 1233568899999998865 4478899999999999999999999864321100 01111110 011111111100
Q ss_pred ----hccch---hhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 946 ----LLSGE---ERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 946 ----~~~~~---~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
..... .......+..+..+.+++.+||+.+|++||++.|+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 283 (286)
T cd07846 234 FAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283 (286)
T ss_pred hhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence 00000 00000111234579999999999999999999999863
No 286
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=8.5e-31 Score=288.05 Aligned_cols=237 Identities=24% Similarity=0.320 Sum_probs=193.9
Q ss_pred hcccccccceecccCceEEEEEEEc-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEE
Q 001838 724 ATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY--ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALI 800 (1007)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 800 (1007)
.+..|.....||+|.|++|..|+.. +|..||||.+++.. ....+.+.+|+++|+.++|||||+++.+...+...|+|
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV 133 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLV 133 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEE
Confidence 4567899999999999999999865 69999999998764 33345588999999999999999999999999999999
Q ss_pred EEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCC
Q 001838 801 MEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQD 868 (1007)
Q Consensus 801 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~ 868 (1007)
|||+.+|.+++++.++....+ ..+..++.|+.+|++|+ |++.|||||++ ||+|||++.++....
T Consensus 134 ~eya~~ge~~~yl~~~gr~~e-~~ar~~F~q~vsaveYc---H~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~ 209 (596)
T KOG0586|consen 134 MEYASGGELFDYLVKHGRMKE-KEARAKFRQIVSAVEYC---HSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYGL 209 (596)
T ss_pred EEeccCchhHHHHHhcccchh-hhhhhhhHHHHHHHHHH---hhcceeccccchhhcccccccceeeeccccceeecccc
Confidence 999999999999998876555 77778999999999999 78999999764 899999999886432
Q ss_pred cccccccccCCcccccccccccCCC-CchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhc
Q 001838 869 QLSMQTQTLATIGYMAPEYGVQGRV-STRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLL 947 (1007)
Q Consensus 869 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~ 947 (1007)
...+.+|++.|.|||+..+.+| ++++|+||+||++|.|+.|..||++....+. -+..+.
T Consensus 210 ---~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~L-----------------r~rvl~ 269 (596)
T KOG0586|consen 210 ---MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKEL-----------------RPRVLR 269 (596)
T ss_pred ---cccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccc-----------------cchhee
Confidence 3356789999999999998876 6799999999999999999999996322111 011111
Q ss_pred cchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 948 SGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 948 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
...+ .+.-...++.+++++++..+|.+|++++++.+.
T Consensus 270 gk~r----Ip~~ms~dce~lLrk~lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 270 GKYR----IPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKD 306 (596)
T ss_pred eeec----ccceeechhHHHHHHhhccCccccCCHHHhhhh
Confidence 1111 011123468899999999999999999999876
No 287
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.97 E-value=4.7e-30 Score=279.06 Aligned_cols=242 Identities=26% Similarity=0.356 Sum_probs=187.1
Q ss_pred cccccceecccCceEEEEEEE-cCCceEEEEEechhh------HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEE
Q 001838 727 RFSKNNLLGIGSFGSVYVARL-QDGMEVAVKVFHQRY------ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKAL 799 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 799 (1007)
+|+..+.||+|+||.||+|.. .+++.||+|++.... .+..+.+.+|++++++++||||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 477889999999999999986 468999999986432 2345788999999999999999999999999999999
Q ss_pred EEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc-------------cccceeecceecCC
Q 001838 800 IMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV-------------AHISDFSIAKFLNG 866 (1007)
Q Consensus 800 v~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~-------------~kl~DFGla~~~~~ 866 (1007)
||||+++++|.+++.+.. .+++..+..++.|++.|++|| |+.+++|+++ .|++|||.+.....
T Consensus 81 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~al~~L---H~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~ 156 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYG-AFKEAVIINYTEQLLRGLSYL---HENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAA 156 (268)
T ss_pred EEeccCCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEcCCCCEEEEccccccccccc
Confidence 999999999999997643 578899999999999999999 5679999865 38999999987653
Q ss_pred CCcc--cccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhh
Q 001838 867 QDQL--SMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDT 944 (1007)
Q Consensus 867 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~ 944 (1007)
.... .......|+..|+|||++....++.++||||+||++|||++|+.||....... ........ ...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~--~~~~~~~~--------~~~ 226 (268)
T cd06630 157 KGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSN--HLALIFKI--------ASA 226 (268)
T ss_pred ccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcc--hHHHHHHH--------hcc
Confidence 2111 11123468899999999888889999999999999999999999986422111 11111000 000
Q ss_pred hhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 945 NLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 945 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
... ...+.....++.+++.+|++.+|++|||+.|+++.
T Consensus 227 -~~~-----~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~ 264 (268)
T cd06630 227 -TTA-----PSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKH 264 (268)
T ss_pred -CCC-----CCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcC
Confidence 000 00112234568899999999999999999999853
No 288
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.97 E-value=4.2e-30 Score=284.90 Aligned_cols=243 Identities=20% Similarity=0.260 Sum_probs=184.5
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIM 801 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 801 (1007)
++|+..+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|+++++.++||||+++++++..++..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 36888999999999999999876 57899999987553 233467889999999999999999999999999999999
Q ss_pred EecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCc
Q 001838 802 EYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQ 869 (1007)
Q Consensus 802 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~ 869 (1007)
||+++|+|.+++.... .+++..+..++.|++.|++|| |+.+++|++++ |++|||+++.......
T Consensus 81 e~~~g~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~ 156 (305)
T cd05609 81 EYVEGGDCATLLKNIG-ALPVDMARMYFAETVLALEYL---HNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLT 156 (305)
T ss_pred ecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCcc
Confidence 9999999999997654 478888899999999999999 56789999663 8999999874211000
Q ss_pred -------------ccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCc
Q 001838 870 -------------LSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPI 936 (1007)
Q Consensus 870 -------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~ 936 (1007)
........|+..|+|||++....++.++|||||||++|||++|+.||.+.... ++....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~-----~~~~~~--- 228 (305)
T cd05609 157 TNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE-----ELFGQV--- 228 (305)
T ss_pred ccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHH---
Confidence 00111235788999999998888999999999999999999999998743211 111110
Q ss_pred cHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 001838 937 SVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLL 990 (1007)
Q Consensus 937 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~ 990 (1007)
......... .....+.++.+++.+||+.+|++||++.++.+.|+
T Consensus 229 -----~~~~~~~~~-----~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~ 272 (305)
T cd05609 229 -----ISDDIEWPE-----GDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQ 272 (305)
T ss_pred -----HhcccCCCC-----ccccCCHHHHHHHHHHhccChhhccCccCHHHHHh
Confidence 000000000 00012346899999999999999999655555544
No 289
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.97 E-value=6.6e-30 Score=285.27 Aligned_cols=182 Identities=20% Similarity=0.287 Sum_probs=146.5
Q ss_pred cceecccCceEEEEEEEc---CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEec--CCeeEEEEEecC
Q 001838 731 NNLLGIGSFGSVYVARLQ---DGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN--DDFKALIMEYMP 805 (1007)
Q Consensus 731 ~~~ig~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~lv~E~~~ 805 (1007)
...||+|+||+||+|+.. ++..||+|.+..... ...+.+|++++++++||||+++++++.. +...++||||++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI--SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE 83 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC--cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence 367999999999999865 357899999875421 2457789999999999999999999854 457899999997
Q ss_pred CCChhHhhhcC--------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc----------------cccceeecc
Q 001838 806 NGSLENRLYSG--------TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV----------------AHISDFSIA 861 (1007)
Q Consensus 806 ~gsL~~~l~~~--------~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~----------------~kl~DFGla 861 (1007)
+ +|.+++... ...+++..+..++.|++.||+|| |+.+|+|||+ .||+|||++
T Consensus 84 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~l---H~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07867 84 H-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYL---HANWVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred C-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHH---HhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence 5 787776421 12478888999999999999999 5778999965 379999999
Q ss_pred eecCCCCc-ccccccccCCcccccccccccC-CCCchhhHHHHHHHHHHHHhCCCCCCc
Q 001838 862 KFLNGQDQ-LSMQTQTLATIGYMAPEYGVQG-RVSTRGDVYSYGIMLMETFTGKKPTDE 918 (1007)
Q Consensus 862 ~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvil~elltG~~p~~~ 918 (1007)
+....... ........||+.|+|||++.+. .++.++|||||||++|||+||++||..
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~ 218 (317)
T cd07867 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred eccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccc
Confidence 87643321 1122345689999999998764 589999999999999999999999964
No 290
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.97 E-value=1.4e-29 Score=276.71 Aligned_cols=234 Identities=26% Similarity=0.354 Sum_probs=185.7
Q ss_pred ccccceecccCceEEEEEEEc-CCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecC
Q 001838 728 FSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMP 805 (1007)
Q Consensus 728 ~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~ 805 (1007)
|+..+.||+|+||.||+|... ++..||||++.... ....+.+.+|++++++++||||+++++++..++..++||||++
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG 85 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCC
Confidence 667789999999999999865 68899999986432 3445678899999999999999999999999999999999999
Q ss_pred CCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCccccc
Q 001838 806 NGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLSMQ 873 (1007)
Q Consensus 806 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~~~~~ 873 (1007)
+|+|.+++... .+++..+..++.|++.|+.|| |+.+++|+++ .+++|||+++....... ..
T Consensus 86 ~~~l~~~i~~~--~~~~~~~~~~~~~l~~~l~~l---h~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~--~~ 158 (277)
T cd06641 86 GGSALDLLEPG--PLDETQIATILREILKGLDYL---HSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI--KR 158 (277)
T ss_pred CCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHH---ccCCeecCCCCHHhEEECCCCCEEEeecccceecccchh--hh
Confidence 99999998754 478999999999999999999 6789999865 37999999987643221 12
Q ss_pred ccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhh
Q 001838 874 TQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERY 953 (1007)
Q Consensus 874 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~ 953 (1007)
....|+..|+|||+.....++.++|||||||++|||++|+.||...... .....+....+..
T Consensus 159 ~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~---------------- 220 (277)
T cd06641 159 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPM--KVLFLIPKNNPPT---------------- 220 (277)
T ss_pred ccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchH--HHHHHHhcCCCCC----------------
Confidence 2346888999999998888999999999999999999999998642211 0111110000000
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 954 FAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 954 ~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
.......++.+++.+|++.+|++||++.|++++
T Consensus 221 --~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 221 --LEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred --CCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 011123468899999999999999999999996
No 291
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.97 E-value=3.7e-30 Score=283.43 Aligned_cols=258 Identities=19% Similarity=0.282 Sum_probs=184.5
Q ss_pred hcccccccceecccCceEEEEEEEc-CCceEEEEEechhhH-HHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEE
Q 001838 724 ATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYE-RALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIM 801 (1007)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 801 (1007)
++++|...+.||+|+||.||+|... +|+.||+|++..... .....+.+|++++++++|+||+++++++..++..|+||
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 5678999999999999999999865 688999999865432 22245678999999999999999999999999999999
Q ss_pred EecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCc
Q 001838 802 EYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQ 869 (1007)
Q Consensus 802 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~ 869 (1007)
||+. +++.+++......+.+..+..++.|++.||.|| |+.+|+|+++ .||+|||+++.......
T Consensus 83 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~l---H~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 158 (291)
T cd07870 83 EYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYI---HGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQ 158 (291)
T ss_pred eccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCCC
Confidence 9996 678777765545578888889999999999999 5678999976 48999999986532211
Q ss_pred ccccccccCCcccccccccccC-CCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHH-HHHhhcCccHH-HHh---h
Q 001838 870 LSMQTQTLATIGYMAPEYGVQG-RVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSR-WVNDLLPISVM-EVI---D 943 (1007)
Q Consensus 870 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~-~~~~~~~~~~~-~~~---d 943 (1007)
......+++.|+|||++.+. .++.++|||||||++|||++|+.||+........+.+ |.....+.... ..+ .
T Consensus 159 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (291)
T cd07870 159 --TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLP 236 (291)
T ss_pred --CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcc
Confidence 11234578899999988754 5789999999999999999999999754321111111 11000110000 000 0
Q ss_pred ---hhhccc-hhhhHH---HHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001838 944 ---TNLLSG-EERYFA---AKEQSLLSILNLATECTIESPGKRINAREIVT 987 (1007)
Q Consensus 944 ---~~~~~~-~~~~~~---~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~ 987 (1007)
+..... ...... .......++.+++.+|++.||++|||+.|++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 237 NYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred cccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 000000 000000 00001346789999999999999999999875
No 292
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.97 E-value=5.2e-30 Score=276.85 Aligned_cols=237 Identities=29% Similarity=0.499 Sum_probs=187.0
Q ss_pred cccceecccCceEEEEEEEcC-----CceEEEEEechhhHH-HHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEE
Q 001838 729 SKNNLLGIGSFGSVYVARLQD-----GMEVAVKVFHQRYER-ALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIME 802 (1007)
Q Consensus 729 ~~~~~ig~G~~g~Vy~~~~~~-----g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E 802 (1007)
...+.||.|+||.||+|+..+ +..||+|++...... ..+.+..|++++++++||||+++++++.+.+..++|||
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e 81 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME 81 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence 456889999999999998764 388999999755432 56789999999999999999999999999999999999
Q ss_pred ecCCCChhHhhhcCCCC-CCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCc
Q 001838 803 YMPNGSLENRLYSGTCM-LDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQ 869 (1007)
Q Consensus 803 ~~~~gsL~~~l~~~~~~-l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~ 869 (1007)
|+++++|.+++...... +++..+..++.|++.|++|| |+.+++|+++ .+++|||+++.......
T Consensus 82 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~l---h~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~ 158 (258)
T smart00219 82 YMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYL---ESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDY 158 (258)
T ss_pred ccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHH---hcCCeeecccccceEEEccCCeEEEcccCCceecccccc
Confidence 99999999999765443 89999999999999999999 6779999976 48999999987754422
Q ss_pred ccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhcc
Q 001838 870 LSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLS 948 (1007)
Q Consensus 870 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~ 948 (1007)
... ....+++.|+|||.+....++.++||||+||++|||++ |+.||.... .....+.+.... ..
T Consensus 159 ~~~-~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~--~~~~~~~~~~~~------------~~ 223 (258)
T smart00219 159 YKK-KGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMS--NEEVLEYLKKGY------------RL 223 (258)
T ss_pred ccc-ccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHhcCC------------CC
Confidence 221 12347789999999988889999999999999999998 788886521 111111111100 00
Q ss_pred chhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 001838 949 GEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGL 989 (1007)
Q Consensus 949 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L 989 (1007)
..+...+.++.+++.+|+..+|++|||+.|+++.|
T Consensus 224 ------~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 224 ------PKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred ------CCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 00111345688999999999999999999998764
No 293
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.97 E-value=5.4e-30 Score=278.04 Aligned_cols=239 Identities=21% Similarity=0.267 Sum_probs=182.1
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechh-----hHHHHHHHHHHHHHHHhcCCCceeEEEEEEecC--Cee
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQR-----YERALKSFQDECEVMKRIRHRNLVKIISACSND--DFK 797 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~ 797 (1007)
.+|...+.||+|+||+||+|... +|..||||.+... ..+..+.+.+|+.++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 46888999999999999999865 5899999988532 123456788999999999999999999998764 468
Q ss_pred EEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecC
Q 001838 798 ALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLN 865 (1007)
Q Consensus 798 ~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~ 865 (1007)
++||||+++|+|.+++.+.. .+++....+++.|++.||+|| |+.+++|++++ ||+|||+++...
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~l~~~l~~l---H~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~ 157 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYG-ALTENVTRKYTRQILEGVSYL---HSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQ 157 (265)
T ss_pred EEEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHEEecCCCCEEECcCccccccc
Confidence 89999999999999987653 378888899999999999999 57789998663 899999998654
Q ss_pred CCCcc-cccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhh
Q 001838 866 GQDQL-SMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDT 944 (1007)
Q Consensus 866 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~ 944 (1007)
..... .......|+..|+|||++....++.++|||||||++|||++|+.||...... ..... ..
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~----~~~~~---------~~-- 222 (265)
T cd06652 158 TICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAM----AAIFK---------IA-- 222 (265)
T ss_pred cccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchH----HHHHH---------Hh--
Confidence 22111 1122346889999999998888999999999999999999999998742110 00000 00
Q ss_pred hhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 945 NLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 945 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
.... ....+......+.+++.+|+. +|++||++.|+++.
T Consensus 223 --~~~~--~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 223 --TQPT--NPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred --cCCC--CCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence 0000 000112234467888899985 89999999999864
No 294
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.97 E-value=4.4e-30 Score=285.07 Aligned_cols=234 Identities=24% Similarity=0.299 Sum_probs=183.3
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechh---hHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQR---YERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIM 801 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 801 (1007)
.+|+..+.||+|+||+||+|+.. +|+.||+|++... ..+..+.+.+|++++++++||||++++++|.+++..|+||
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 45888899999999999999875 6899999998643 2334467889999999999999999999999999999999
Q ss_pred EecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCc
Q 001838 802 EYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQ 869 (1007)
Q Consensus 802 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~ 869 (1007)
||++ |++.+++......+++..+..++.|++.||.|| |+.+|+|+++ .||+|||+++.....
T Consensus 95 e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~L---H~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~-- 168 (307)
T cd06607 95 EYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYL---HSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA-- 168 (307)
T ss_pred HhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHH---HHCCceecCCCcccEEECCCCCEEEeecCcceecCCC--
Confidence 9997 578777765555689999999999999999999 5778999865 389999999865422
Q ss_pred ccccccccCCcccccccccc---cCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhh
Q 001838 870 LSMQTQTLATIGYMAPEYGV---QGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNL 946 (1007)
Q Consensus 870 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~ 946 (1007)
....|++.|+|||++. ...++.++|||||||++|||+||+.||....... .........+ +..
T Consensus 169 ----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~--~~~~~~~~~~--------~~~ 234 (307)
T cd06607 169 ----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS--ALYHIAQNDS--------PTL 234 (307)
T ss_pred ----CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHH--HHHHHhcCCC--------CCC
Confidence 2346788999999874 3568899999999999999999999987532110 0000000000 000
Q ss_pred ccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 947 LSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 947 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
.......++.+++.+||+.+|++||++.+|+.+
T Consensus 235 ---------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 235 ---------SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred ---------CchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 011234568999999999999999999999885
No 295
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.97 E-value=2.4e-31 Score=295.89 Aligned_cols=184 Identities=30% Similarity=0.462 Sum_probs=160.7
Q ss_pred ccceecccCceEEEEEEEc-CCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCC------eeEEEE
Q 001838 730 KNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVKIISACSNDD------FKALIM 801 (1007)
Q Consensus 730 ~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------~~~lv~ 801 (1007)
..+.+|+|+||.||+|+.+ +|+.||||.+.... ....+...+|++++++++|||||++++.-.+.. ...+||
T Consensus 17 ~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvm 96 (732)
T KOG4250|consen 17 MDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVM 96 (732)
T ss_pred ehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEE
Confidence 3577999999999999955 79999999997643 234567889999999999999999999876543 578999
Q ss_pred EecCCCChhHhhhcC--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc----------------ccceeeccee
Q 001838 802 EYMPNGSLENRLYSG--TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA----------------HISDFSIAKF 863 (1007)
Q Consensus 802 E~~~~gsL~~~l~~~--~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~----------------kl~DFGla~~ 863 (1007)
|||.+|||+..|.+. ...++..+.+.+..+++.||.|| |+++|+|||++ ||+|||.||.
T Consensus 97 EyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~L---rEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Are 173 (732)
T KOG4250|consen 97 EYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHL---RENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARE 173 (732)
T ss_pred eecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHH---HHcCceeccCCCCcEEEeecCCCceEEeeeccccccc
Confidence 999999999999864 45799999999999999999999 68899999886 8999999999
Q ss_pred cCCCCcccccccccCCccccccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCCcc
Q 001838 864 LNGQDQLSMQTQTLATIGYMAPEYGVQ-GRVSTRGDVYSYGIMLMETFTGKKPTDEI 919 (1007)
Q Consensus 864 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvil~elltG~~p~~~~ 919 (1007)
+.++. ..++.+||..|.+||.... +.|+..+|.|||||++||.+||..||..-
T Consensus 174 l~d~s---~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~ 227 (732)
T KOG4250|consen 174 LDDNS---LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPF 227 (732)
T ss_pred CCCCC---eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcC
Confidence 87554 3467899999999999885 78999999999999999999999999753
No 296
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.97 E-value=2.7e-30 Score=281.76 Aligned_cols=242 Identities=25% Similarity=0.385 Sum_probs=184.9
Q ss_pred ccccceecccCceEEEEEEEc----CCceEEEEEechh--hHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCC------
Q 001838 728 FSKNNLLGIGSFGSVYVARLQ----DGMEVAVKVFHQR--YERALKSFQDECEVMKRIRHRNLVKIISACSNDD------ 795 (1007)
Q Consensus 728 ~~~~~~ig~G~~g~Vy~~~~~----~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------ 795 (1007)
|...+.||+|+||+||+|... +++.||||++... .....+++.+|++++++++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 556788999999999999854 3688999998753 2344577899999999999999999999886532
Q ss_pred eeEEEEEecCCCChhHhhhcC-----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------cccee
Q 001838 796 FKALIMEYMPNGSLENRLYSG-----TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDF 858 (1007)
Q Consensus 796 ~~~lv~E~~~~gsL~~~l~~~-----~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DF 858 (1007)
..++++||+++|+|.+++... ...+++....+++.|++.|++|| |+.+|+|++++ |++||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~l---H~~~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYL---SSKNFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHH---HhCCEeecccchhhEEEcCCCCEEECcc
Confidence 347899999999999887532 22478888999999999999999 56789999764 89999
Q ss_pred ecceecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCcc
Q 001838 859 SIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPIS 937 (1007)
Q Consensus 859 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~ 937 (1007)
|+++...............+++.|++||.+....++.++|||||||++|||++ |+.||..... ..+..+......
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~--~~~~~~~~~~~~-- 233 (273)
T cd05074 158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN--SEIYNYLIKGNR-- 233 (273)
T ss_pred cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH--HHHHHHHHcCCc--
Confidence 99987643322222223446678999999988889999999999999999999 8899864321 112222111000
Q ss_pred HHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHH
Q 001838 938 VMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKI 992 (1007)
Q Consensus 938 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i 992 (1007)
.. .....+.++.+++.+|++.+|++||++.|+++.|+++
T Consensus 234 --------~~--------~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 234 --------LK--------QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred --------CC--------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 00 0011234689999999999999999999999999976
No 297
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.97 E-value=1.7e-30 Score=286.69 Aligned_cols=235 Identities=24% Similarity=0.321 Sum_probs=184.2
Q ss_pred cccceecccCceEEEEEEEc-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecCCC
Q 001838 729 SKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNG 807 (1007)
Q Consensus 729 ~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~g 807 (1007)
+....||+|+||.||+|... +++.||||++........+.+.+|+.++++++||||+++++++..++..|+||||++++
T Consensus 24 ~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~ 103 (297)
T cd06659 24 ENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGG 103 (297)
T ss_pred HhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCC
Confidence 33457999999999999865 68999999987554444567889999999999999999999999999999999999999
Q ss_pred ChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCccccccc
Q 001838 808 SLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQ 875 (1007)
Q Consensus 808 sL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~~~~ 875 (1007)
+|.+++... .+++..+..++.|++.|++|| |+.+++|+++. ||+|||+++....... ....
T Consensus 104 ~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~L---H~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~--~~~~ 176 (297)
T cd06659 104 ALTDIVSQT--RLNEEQIATVCESVLQALCYL---HSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP--KRKS 176 (297)
T ss_pred CHHHHHhhc--CCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccc--cccc
Confidence 999987653 478999999999999999999 57789999764 8999999976543221 1234
Q ss_pred ccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhhHH
Q 001838 876 TLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYFA 955 (1007)
Q Consensus 876 ~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 955 (1007)
..|+..|+|||++.+..++.++|||||||++|||++|+.||..... ......+....+.. ..
T Consensus 177 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~--~~~~~~~~~~~~~~--------~~-------- 238 (297)
T cd06659 177 LVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSP--VQAMKRLRDSPPPK--------LK-------- 238 (297)
T ss_pred eecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHhccCCCC--------cc--------
Confidence 5689999999999888899999999999999999999999874211 11111111100000 00
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 956 AKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 956 ~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
.......++.+++.+|++.+|++||++.|+++.
T Consensus 239 ~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 239 NAHKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred ccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 001123457899999999999999999999985
No 298
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.97 E-value=6.5e-30 Score=281.56 Aligned_cols=257 Identities=21% Similarity=0.241 Sum_probs=184.6
Q ss_pred cccccccceecccCceEEEEEEEc-CCceEEEEEechhhH-HHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEE
Q 001838 725 TDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYE-RALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIME 802 (1007)
Q Consensus 725 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E 802 (1007)
.++|+..+.||+|+||+||+|+.+ +++.||||.+..... .....+.+|++++++++||||+++++++.+.+..++|||
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFE 83 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEe
Confidence 367889999999999999999876 689999999865421 122456789999999999999999999999999999999
Q ss_pred ecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCcc
Q 001838 803 YMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQL 870 (1007)
Q Consensus 803 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~~ 870 (1007)
|+++ +|.+++.+....+++.....++.|++.||.|| |+.+|+|+++ +|++|||+++.......
T Consensus 84 ~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~l---H~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~- 158 (291)
T cd07844 84 YLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYC---HQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSK- 158 (291)
T ss_pred cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeecccCCHHHEEEcCCCCEEECccccccccCCCCc-
Confidence 9985 99999877655788999999999999999999 5778999966 48999999875432111
Q ss_pred cccccccCCccccccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhc---CccHHHHhhh--
Q 001838 871 SMQTQTLATIGYMAPEYGVQ-GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLL---PISVMEVIDT-- 944 (1007)
Q Consensus 871 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~---~~~~~~~~d~-- 944 (1007)
......++..|+|||++.+ ..++.++||||+||++|||++|+.||.........+........ +.......+.
T Consensus 159 -~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (291)
T cd07844 159 -TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPE 237 (291)
T ss_pred -cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccc
Confidence 1123356889999998765 45899999999999999999999999754311111111100000 0000000000
Q ss_pred ----hhcc-chhhhHHHHHHH--HHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001838 945 ----NLLS-GEERYFAAKEQS--LLSILNLATECTIESPGKRINAREIVT 987 (1007)
Q Consensus 945 ----~~~~-~~~~~~~~~~~~--~~~~~~l~~~cl~~~p~~Rpt~~evl~ 987 (1007)
.... ............ ..++.+++.+|++.+|++|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 238 FKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred cccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 0000 000000000001 146789999999999999999999875
No 299
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.97 E-value=2.7e-30 Score=278.46 Aligned_cols=234 Identities=27% Similarity=0.465 Sum_probs=183.5
Q ss_pred ccccccceecccCceEEEEEEEcCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecC
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMP 805 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~ 805 (1007)
++|...+.||+|+||.||+|.. +++.||+|+++... ..+.+.+|+.++++++||||+++++++...+ .++||||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-~~~v~e~~~ 81 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHNG-LYIVMELMS 81 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCCC-cEEEEECCC
Confidence 4588889999999999999975 57889999987543 2357889999999999999999999987654 799999999
Q ss_pred CCChhHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCcccc
Q 001838 806 NGSLENRLYSGT-CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLSM 872 (1007)
Q Consensus 806 ~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~~~~ 872 (1007)
+|+|.+++.... ..+++..+..++.|++.|+.|| |+.+++|+|+ +||+|||+++......
T Consensus 82 ~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~l---H~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~---- 154 (254)
T cd05083 82 KGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYL---ESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV---- 154 (254)
T ss_pred CCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHH---HhCCeeccccCcceEEEcCCCcEEECCCccceeccccC----
Confidence 999999997543 3578999999999999999999 5789999865 3899999998653211
Q ss_pred cccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchh
Q 001838 873 QTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEE 951 (1007)
Q Consensus 873 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~ 951 (1007)
.....+..|+|||++....++.++|||||||++|||++ |+.||...... .+. +.+......
T Consensus 155 -~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~-----~~~---------~~~~~~~~~--- 216 (254)
T cd05083 155 -DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLK-----EVK---------ECVEKGYRM--- 216 (254)
T ss_pred -CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHH-----HHH---------HHHhCCCCC---
Confidence 12234578999999988889999999999999999998 99998753211 111 111110000
Q ss_pred hhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 001838 952 RYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLK 991 (1007)
Q Consensus 952 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~ 991 (1007)
..+...+.++.+++.+||+.+|++||+++|+++.|++
T Consensus 217 ---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 217 ---EPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred ---CCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 0011224568899999999999999999999998863
No 300
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.97 E-value=7.5e-30 Score=279.86 Aligned_cols=238 Identities=25% Similarity=0.280 Sum_probs=178.4
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhh-HHHHHHHHHHHHH-HHhcCCCceeEEEEEEecCCeeEEEEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY-ERALKSFQDECEV-MKRIRHRNLVKIISACSNDDFKALIME 802 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~-l~~l~H~niv~l~~~~~~~~~~~lv~E 802 (1007)
++|+..+.||+|+||.||+|+.. +|+.||||+++... .....++..|+.+ ++..+|||||++++++..++..|+|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 46888999999999999999876 69999999987542 2223455566665 566789999999999999999999999
Q ss_pred ecCCCChhHhhhc---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-Cceeccc------------cccceeecceecCC
Q 001838 803 YMPNGSLENRLYS---GTCMLDIFQRLNIMIDVALALEYLHFGHST-PIIHYMV------------AHISDFSIAKFLNG 866 (1007)
Q Consensus 803 ~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~-~ivH~~~------------~kl~DFGla~~~~~ 866 (1007)
|++ |+|.+++.. ....+++..+..++.|++.|++||| +. +++|+++ .||+|||+++....
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 156 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLH---SKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVD 156 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence 997 688877753 2346899999999999999999995 44 8999865 38999999987642
Q ss_pred CCcccccccccCCccccccccccc----CCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHh
Q 001838 867 QDQLSMQTQTLATIGYMAPEYGVQ----GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVI 942 (1007)
Q Consensus 867 ~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 942 (1007)
.. ..+...|+..|+|||++.. ..++.++|||||||++|||++|+.||.........+........
T Consensus 157 ~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~-------- 225 (283)
T cd06617 157 SV---AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPS-------- 225 (283)
T ss_pred cc---ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCC--------
Confidence 21 1123468889999998764 45789999999999999999999998642211111111110000
Q ss_pred hhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 943 DTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 943 d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
+.. . ....+.++.+++.+||..+|++||++.|+++.
T Consensus 226 -~~~---~------~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 261 (283)
T cd06617 226 -PQL---P------AEKFSPEFQDFVNKCLKKNYKERPNYPELLQH 261 (283)
T ss_pred -CCC---C------ccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 0 01124568899999999999999999999874
No 301
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.97 E-value=4.7e-30 Score=280.08 Aligned_cols=242 Identities=23% Similarity=0.318 Sum_probs=186.2
Q ss_pred HhcccccccceecccCceEEEEEEEc-CCceEEEEEechhhHHHHHHHHHHHHHHHhc-CCCceeEEEEEEecCC-----
Q 001838 723 QATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKSFQDECEVMKRI-RHRNLVKIISACSNDD----- 795 (1007)
Q Consensus 723 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~----- 795 (1007)
.++++|+..+.||+|+||.||+|... +++.||+|++..... ..+++.+|+++++++ +||||+++++++....
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND 81 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence 35789999999999999999999975 578999999876543 336789999999999 6999999999997644
Q ss_pred -eeEEEEEecCCCChhHhhhcC---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceee
Q 001838 796 -FKALIMEYMPNGSLENRLYSG---TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFS 859 (1007)
Q Consensus 796 -~~~lv~E~~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFG 859 (1007)
..++||||+++++|.+++... ...+++..+..++.|++.||.|| |+.+++|+++ .|++|||
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~l---H~~~i~H~~l~p~ni~~~~~~~~~l~d~~ 158 (275)
T cd06608 82 DQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYL---HENKVIHRDIKGQNILLTKNAEVKLVDFG 158 (275)
T ss_pred eEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHH---hcCCcccCCCCHHHEEEccCCeEEECCCc
Confidence 489999999999999988642 34688999999999999999999 6788999865 3899999
Q ss_pred cceecCCCCcccccccccCCccccccccccc-----CCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhc
Q 001838 860 IAKFLNGQDQLSMQTQTLATIGYMAPEYGVQ-----GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLL 934 (1007)
Q Consensus 860 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~ 934 (1007)
++....... .......|+..|+|||++.. ..++.++|||||||++|||++|+.||...... ..+.+.....
T Consensus 159 ~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~- 234 (275)
T cd06608 159 VSAQLDSTL--GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPM-RALFKIPRNP- 234 (275)
T ss_pred cceecccch--hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchH-HHHHHhhccC-
Confidence 998764321 11234568999999998753 34788999999999999999999999743211 1111100000
Q ss_pred CccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 935 PISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 935 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
.+. ...+.....++.+++.+||..||++|||+.|++++
T Consensus 235 --------~~~--------~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~ 272 (275)
T cd06608 235 --------PPT--------LKSPENWSKKFNDFISECLIKNYEQRPFMEELLEH 272 (275)
T ss_pred --------CCC--------CCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 000 00111234568899999999999999999999863
No 302
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.97 E-value=1.2e-29 Score=278.66 Aligned_cols=255 Identities=20% Similarity=0.244 Sum_probs=188.9
Q ss_pred cccccceecccCceEEEEEEEc-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEe
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY--ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEY 803 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~ 803 (1007)
+|+..+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 4778899999999999999875 68999999987543 33456789999999999999999999999999999999999
Q ss_pred cCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCccc
Q 001838 804 MPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLS 871 (1007)
Q Consensus 804 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~~~ 871 (1007)
+ +++|.+++......+++.++..++.||++||+|| |+.+++|+++ .+++|||+++....... .
T Consensus 81 ~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~-~ 155 (286)
T cd07832 81 M-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYM---HANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP-R 155 (286)
T ss_pred c-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC-C
Confidence 9 9999999976556689999999999999999999 5678999976 37999999987654322 1
Q ss_pred ccccccCCcccccccccccC-CCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCc----cHHHHh----
Q 001838 872 MQTQTLATIGYMAPEYGVQG-RVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPI----SVMEVI---- 942 (1007)
Q Consensus 872 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~----~~~~~~---- 942 (1007)
......|+.+|+|||.+... .++.++||||+||++|||+||++||..... .....++...... ...+..
T Consensus 156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (286)
T cd07832 156 LYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGEND--IEQLAIVFRTLGTPNEETWPGLTSLPD 233 (286)
T ss_pred ccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCH--HHHHHHHHHHcCCCChHHHhhccCcch
Confidence 12345689999999987654 468999999999999999999888764321 1111111111000 000000
Q ss_pred -hhhhcc-chh-hhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 943 -DTNLLS-GEE-RYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 943 -d~~~~~-~~~-~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
+..... ... ......++...++.+++.+|++.+|++|||+++++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 234 YNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred hhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 000000 000 0000111224678999999999999999999999864
No 303
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.97 E-value=5.3e-30 Score=281.84 Aligned_cols=257 Identities=24% Similarity=0.270 Sum_probs=187.9
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY--ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIME 802 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E 802 (1007)
++|+..+.||+|+||.||+|... +++.||||+++... ....+.+.+|++++++++|+||+++++++..++..++|||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 36888999999999999999876 58899999987542 2334678999999999999999999999999999999999
Q ss_pred ecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCcc
Q 001838 803 YMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQL 870 (1007)
Q Consensus 803 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~~ 870 (1007)
|++++.+..+.... ..+++..+..++.||+.|++|| |..+++|+++ +||+|||++.........
T Consensus 81 ~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~L---H~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~ 156 (288)
T cd07833 81 YVERTLLELLEASP-GGLPPDAVRSYIWQLLQAIAYC---HSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPAS 156 (288)
T ss_pred cCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCccc
Confidence 99987776655443 3488999999999999999999 5678999865 389999999887544321
Q ss_pred cccccccCCcccccccccccC-CCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHh--hcCccHHHHhh--hh
Q 001838 871 SMQTQTLATIGYMAPEYGVQG-RVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVND--LLPISVMEVID--TN 945 (1007)
Q Consensus 871 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~--~~~~~~~~~~d--~~ 945 (1007)
......++..|+|||++... .++.++|||||||++|||++|+.||......+ .+..-... ..+........ ..
T Consensus 157 -~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T cd07833 157 -PLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDID-QLYLIQKCLGPLPPSHQELFSSNPR 234 (288)
T ss_pred -cccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHhhhcccCcc
Confidence 12335678999999999887 78999999999999999999999987532111 01000000 00000000000 00
Q ss_pred hc--------cchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 946 LL--------SGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 946 ~~--------~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
.. .........+...+.++.+++.+||..+|++|||++++++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 285 (288)
T cd07833 235 FAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH 285 (288)
T ss_pred ccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence 00 00000000111225679999999999999999999999863
No 304
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.97 E-value=1.8e-30 Score=291.19 Aligned_cols=228 Identities=20% Similarity=0.229 Sum_probs=172.4
Q ss_pred ecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhc---CCCceeEEEEEEecCCeeEEEEEecCC
Q 001838 734 LGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRI---RHRNLVKIISACSNDDFKALIMEYMPN 806 (1007)
Q Consensus 734 ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l---~H~niv~l~~~~~~~~~~~lv~E~~~~ 806 (1007)
||+|+||+||+|+.. +|+.||||++.... ......+..|..++.+. +||||+++++++.+.+..|+||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 699999999999865 58999999997542 22334456677777765 699999999999999999999999999
Q ss_pred CChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcccccc
Q 001838 807 GSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQT 874 (1007)
Q Consensus 807 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~~~ 874 (1007)
|+|.+++.+.. .+++..+..++.||++||+|| |+.+|+|||++ ||+|||+++....... ...
T Consensus 81 g~L~~~l~~~~-~~~~~~~~~~~~qil~al~~L---H~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~--~~~ 154 (330)
T cd05586 81 GELFWHLQKEG-RFSEDRAKFYIAELVLALEHL---HKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNK--TTN 154 (330)
T ss_pred ChHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCC--Ccc
Confidence 99999987644 488899999999999999999 57789999864 8999999986432211 123
Q ss_pred cccCCcccccccccccC-CCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhh
Q 001838 875 QTLATIGYMAPEYGVQG-RVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERY 953 (1007)
Q Consensus 875 ~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~ 953 (1007)
...||+.|+|||++.+. .++.++|||||||++|||+||+.||...... +........ .....
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~-----~~~~~i~~~--------~~~~~---- 217 (330)
T cd05586 155 TFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQ-----QMYRNIAFG--------KVRFP---- 217 (330)
T ss_pred CccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHH-----HHHHHHHcC--------CCCCC----
Confidence 45799999999998764 4899999999999999999999999753211 111110000 00000
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCC----HHHHHH
Q 001838 954 FAAKEQSLLSILNLATECTIESPGKRIN----AREIVT 987 (1007)
Q Consensus 954 ~~~~~~~~~~~~~l~~~cl~~~p~~Rpt----~~evl~ 987 (1007)
......++.+++.+||+.||++||+ +.|+++
T Consensus 218 ---~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 218 ---KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred ---CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 0011345789999999999999995 555544
No 305
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.97 E-value=6.2e-30 Score=280.65 Aligned_cols=255 Identities=21% Similarity=0.250 Sum_probs=183.9
Q ss_pred cccccceecccCceEEEEEEEc-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEe
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY--ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEY 803 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~ 803 (1007)
+|+..+.||+|++|.||+|+.. +|+.||||+++... ....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 4788899999999999999875 68999999886432 22335788999999999999999999999999999999999
Q ss_pred cCCCChhHhhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCcc
Q 001838 804 MPNGSLENRLYSG-TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQL 870 (1007)
Q Consensus 804 ~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~~ 870 (1007)
+. ++|.+++... ...+++..+..++.|++.|++|| |+.+++|+++ .|++|||+++......
T Consensus 81 ~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~l---h~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~-- 154 (284)
T cd07860 81 LH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFC---HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-- 154 (284)
T ss_pred cc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCc--
Confidence 96 6898888653 34588999999999999999999 5678999865 4899999998654221
Q ss_pred cccccccCCcccccccccccCC-CCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCc--cHHHHhhh---
Q 001838 871 SMQTQTLATIGYMAPEYGVQGR-VSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPI--SVMEVIDT--- 944 (1007)
Q Consensus 871 ~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~--~~~~~~d~--- 944 (1007)
.......+++.|+|||++.+.. ++.++|||||||++|||+||+.||...... ....+........ .....+..
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd07860 155 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTPDEVVWPGVTSLPD 233 (284)
T ss_pred cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHHhCCCChhhhhhhhHHHH
Confidence 1123345788999999876644 688999999999999999999999753211 1111211111110 00000000
Q ss_pred ---hhccc-hhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 945 ---NLLSG-EERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 945 ---~~~~~-~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
..... ........+....++.+++.+|++.||++|||++|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 234 YKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred HHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 00000 000000011223467899999999999999999999863
No 306
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.97 E-value=2.1e-29 Score=273.27 Aligned_cols=239 Identities=26% Similarity=0.304 Sum_probs=191.4
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhhH-HHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEe
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYE-RALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEY 803 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~ 803 (1007)
++|+..+.||+|++|.||+|+.. +++.||||++..... ...+.+.+|++.+.+++||||+++++++...+..++||||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 36788899999999999999977 499999999876543 4457899999999999999999999999999999999999
Q ss_pred cCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCC-CCceeccc------------cccceeecceecCCCCcc
Q 001838 804 MPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHS-TPIIHYMV------------AHISDFSIAKFLNGQDQL 870 (1007)
Q Consensus 804 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~-~~ivH~~~------------~kl~DFGla~~~~~~~~~ 870 (1007)
+++++|.+++... ..+++..+..++.|+++|++|| |+ .+++|+++ .+++|||.++........
T Consensus 81 ~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~l---h~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~ 156 (264)
T cd06623 81 MDGGSLADLLKKV-GKIPEPVLAYIARQILKGLDYL---HTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQ 156 (264)
T ss_pred cCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHH---hccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCc
Confidence 9999999999765 4588999999999999999999 66 89999865 389999999876533221
Q ss_pred cccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCcccc-CcchHHHHHHhhcCccHHHHhhhhhccc
Q 001838 871 SMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFI-GELSLSRWVNDLLPISVMEVIDTNLLSG 949 (1007)
Q Consensus 871 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~-~~~~l~~~~~~~~~~~~~~~~d~~~~~~ 949 (1007)
.....++..|+|||.+....++.++||||||+++|||+||+.||..... .......++... ....
T Consensus 157 --~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~-----------~~~~- 222 (264)
T cd06623 157 --CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDG-----------PPPS- 222 (264)
T ss_pred --ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcC-----------CCCC-
Confidence 1234578899999999888899999999999999999999999976432 111111111100 0000
Q ss_pred hhhhHHHHHH-HHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 950 EERYFAAKEQ-SLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 950 ~~~~~~~~~~-~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
.... .+..+.+++.+|+..+|++||++.|++++
T Consensus 223 ------~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 223 ------LPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred ------CCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 0011 24568999999999999999999999985
No 307
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.97 E-value=3.9e-30 Score=277.76 Aligned_cols=237 Identities=23% Similarity=0.346 Sum_probs=186.9
Q ss_pred cccccceecccCceEEEEEEEc-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEe
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY--ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEY 803 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~ 803 (1007)
+|+..+.||+|+||.||+|... +|..||+|.+.... ....+.+.+|++++++++|+||+++++++.+.+..++|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 4778899999999999999876 58899999987542 23346788999999999999999999999999999999999
Q ss_pred cCCCChhHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc-------------cccceeecceecCCCCc
Q 001838 804 MPNGSLENRLYSGT-CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV-------------AHISDFSIAKFLNGQDQ 869 (1007)
Q Consensus 804 ~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~-------------~kl~DFGla~~~~~~~~ 869 (1007)
+++++|.+++.+.. ..+++..+..++.|++.|+.|| |+.+++|+++ .|++|||.+........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l---h~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~ 157 (257)
T cd08225 81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHI---HDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSME 157 (257)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH---HHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCcc
Confidence 99999999997643 3578999999999999999999 5678999855 37999999987643322
Q ss_pred ccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccc
Q 001838 870 LSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSG 949 (1007)
Q Consensus 870 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~ 949 (1007)
. .....|++.|+|||+.....++.++|||||||++|||++|+.||.... ..+++....... ....
T Consensus 158 ~--~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~--------~~~~ 222 (257)
T cd08225 158 L--AYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN-----LHQLVLKICQGY--------FAPI 222 (257)
T ss_pred c--ccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc-----HHHHHHHHhccc--------CCCC
Confidence 1 123458899999999888889999999999999999999999987432 112221111110 0000
Q ss_pred hhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 950 EERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 950 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
......++.+++.+|++.+|++|||+.|++++
T Consensus 223 -------~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 223 -------SPNFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred -------CCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 00113468899999999999999999999864
No 308
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.97 E-value=1.1e-29 Score=275.39 Aligned_cols=240 Identities=28% Similarity=0.386 Sum_probs=187.2
Q ss_pred cccccceecccCceEEEEEEEc-CCceEEEEEechhhH--HHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEe
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYE--RALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEY 803 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~ 803 (1007)
+|+..+.||+|+||.||+|... +++.||+|.++.... ...+.+.+|++++++++|+||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 5788899999999999999865 689999999875543 3567899999999999999999999999999999999999
Q ss_pred cCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCccc
Q 001838 804 MPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLS 871 (1007)
Q Consensus 804 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~~~ 871 (1007)
+++++|.+++..+. .+++..+..++.|+++|+.|| |+.+|+|+++ +||+|||++..........
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~l---h~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~ 156 (264)
T cd06626 81 CSGGTLEELLEHGR-ILDEHVIRVYTLQLLEGLAYL---HSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTM 156 (264)
T ss_pred CCCCcHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcc
Confidence 99999999997653 478888999999999999999 5678999976 4899999998765432211
Q ss_pred c--cccccCCcccccccccccCC---CCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhh
Q 001838 872 M--QTQTLATIGYMAPEYGVQGR---VSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNL 946 (1007)
Q Consensus 872 ~--~~~~~gt~~y~aPE~~~~~~---~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~ 946 (1007)
. .....++..|+|||++.... ++.++|||||||++||+++|+.||..... ............ .+..
T Consensus 157 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~-~~~~~~~~~~~~--------~~~~ 227 (264)
T cd06626 157 GEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDN-EFQIMFHVGAGH--------KPPI 227 (264)
T ss_pred cccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcc-hHHHHHHHhcCC--------CCCC
Confidence 1 11346788999999988766 89999999999999999999999975321 111111111000 0000
Q ss_pred ccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001838 947 LSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVT 987 (1007)
Q Consensus 947 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~ 987 (1007)
+........+.+++.+||+.+|++|||+.|++.
T Consensus 228 --------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 228 --------PDSLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred --------CcccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 000111345789999999999999999999875
No 309
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.97 E-value=1.4e-29 Score=278.20 Aligned_cols=243 Identities=26% Similarity=0.338 Sum_probs=191.8
Q ss_pred HhcccccccceecccCceEEEEEEEc-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEE
Q 001838 723 QATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIM 801 (1007)
Q Consensus 723 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 801 (1007)
..++.|+..+.||+|+||.||+|..+ ++..||+|+++.... ..+.+.+|++++++++|+||+++++++...+..|+|+
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 94 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVM 94 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEE
Confidence 35667888899999999999999977 688999999976544 4567889999999999999999999999999999999
Q ss_pred EecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCc
Q 001838 802 EYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQ 869 (1007)
Q Consensus 802 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~ 869 (1007)
||+++++|.+++......+++..+..++.|++.|+.|| |..+++|+++ .+|+|||++........
T Consensus 95 e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~l---H~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 171 (286)
T cd06614 95 EYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYL---HSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS 171 (286)
T ss_pred eccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHH---HhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchh
Confidence 99999999999987654689999999999999999999 5689999865 47999999876543211
Q ss_pred ccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccc
Q 001838 870 LSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSG 949 (1007)
Q Consensus 870 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~ 949 (1007)
......++..|+|||++.+..++.++|||||||++|||++|+.||....... ....+.....+
T Consensus 172 --~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~-~~~~~~~~~~~-------------- 234 (286)
T cd06614 172 --KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLR-ALFLITTKGIP-------------- 234 (286)
T ss_pred --hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhcCCC--------------
Confidence 1123457889999999988889999999999999999999999986421110 00111000000
Q ss_pred hhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 001838 950 EERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGL 989 (1007)
Q Consensus 950 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L 989 (1007)
..........++.+++.+|++.+|.+|||+.|+++.-
T Consensus 235 ---~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~ 271 (286)
T cd06614 235 ---PLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHP 271 (286)
T ss_pred ---CCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhCh
Confidence 0000111244688999999999999999999998743
No 310
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.97 E-value=7.2e-31 Score=262.35 Aligned_cols=240 Identities=22% Similarity=0.251 Sum_probs=188.5
Q ss_pred hccccccc-ceecccCceEEEEEEEc-CCceEEEEEechhhHHHHHHHHHHHHHHHhc-CCCceeEEEEEEec----CCe
Q 001838 724 ATDRFSKN-NLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKSFQDECEVMKRI-RHRNLVKIISACSN----DDF 796 (1007)
Q Consensus 724 ~~~~~~~~-~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~----~~~ 796 (1007)
.|++|++. ++||-|-.|+|..|..+ +|+.+|+|++... ...++|+++.-.. .|||||.++++|.. ...
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkc 133 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKC 133 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCcee
Confidence 35566654 67899999999999865 6899999998654 3456899887766 49999999999864 346
Q ss_pred eEEEEEecCCCChhHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc---------------ccceeec
Q 001838 797 KALIMEYMPNGSLENRLYSGT-CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA---------------HISDFSI 860 (1007)
Q Consensus 797 ~~lv~E~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~---------------kl~DFGl 860 (1007)
..+|||.|+||.|+..+.+++ ..+++.++-.|+.||+.|+.|| |+..|.|||++ |++|||+
T Consensus 134 LLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~l---H~~nIAHRDlKpENLLyt~t~~na~lKLtDfGF 210 (400)
T KOG0604|consen 134 LLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYL---HSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGF 210 (400)
T ss_pred eEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHH---HhcchhhccCChhheeeecCCCCcceEeccccc
Confidence 789999999999999997653 4689999999999999999999 78899999885 8999999
Q ss_pred ceecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHH
Q 001838 861 AKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVME 940 (1007)
Q Consensus 861 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 940 (1007)
||..... ....+.+-|++|.|||++...+|+..+|+||+||++|-|+.|.+||...... .+ +..
T Consensus 211 AK~t~~~---~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~--ai--------spg--- 274 (400)
T KOG0604|consen 211 AKETQEP---GDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--AI--------SPG--- 274 (400)
T ss_pred ccccCCC---ccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCc--cC--------Chh---
Confidence 9976432 2234567899999999999999999999999999999999999999764321 11 111
Q ss_pred Hhhhhhccc-hhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 941 VIDTNLLSG-EERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 941 ~~d~~~~~~-~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
+..++..+ .....+...+.+++..++++..|..+|++|.|+.|++++
T Consensus 275 -Mk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~h 322 (400)
T KOG0604|consen 275 -MKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDH 322 (400)
T ss_pred -HHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence 11111111 111222344567789999999999999999999999875
No 311
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.97 E-value=1.8e-29 Score=281.40 Aligned_cols=233 Identities=25% Similarity=0.321 Sum_probs=182.5
Q ss_pred ccccceecccCceEEEEEEEc-CCceEEEEEechh---hHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEe
Q 001838 728 FSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQR---YERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEY 803 (1007)
Q Consensus 728 ~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~ 803 (1007)
|+..+.||+|+||.||+|+.. +|..||+|++... ..+..+.+.+|++++++++|||+|++++++.+++..++||||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 667788999999999999865 6889999998643 234456788999999999999999999999999999999999
Q ss_pred cCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCccc
Q 001838 804 MPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLS 871 (1007)
Q Consensus 804 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~~~ 871 (1007)
++ |++.+.+......+++.++..++.|++.|+.|| |+.+|+|+++ .|++|||++......
T Consensus 107 ~~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~l---H~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~---- 178 (317)
T cd06635 107 CL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYL---HSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPA---- 178 (317)
T ss_pred CC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCcccEEECCCCCEEEecCCCccccCCc----
Confidence 97 588888866556689999999999999999999 5778999865 389999998765322
Q ss_pred ccccccCCcccccccccc---cCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhcc
Q 001838 872 MQTQTLATIGYMAPEYGV---QGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLS 948 (1007)
Q Consensus 872 ~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~ 948 (1007)
....|++.|+|||++. .+.++.++|||||||++|||++|+.||...... ..+..+.....+.
T Consensus 179 --~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~-~~~~~~~~~~~~~------------ 243 (317)
T cd06635 179 --NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-SALYHIAQNESPT------------ 243 (317)
T ss_pred --ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHH-HHHHHHHhccCCC------------
Confidence 2346888999999874 456899999999999999999999998653110 1111111110000
Q ss_pred chhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 001838 949 GEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGL 989 (1007)
Q Consensus 949 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L 989 (1007)
.........+.+++.+|++.+|.+||++.|+++..
T Consensus 244 ------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~ 278 (317)
T cd06635 244 ------LQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHM 278 (317)
T ss_pred ------CCCccccHHHHHHHHHHccCCcccCcCHHHHHhCh
Confidence 00112234688999999999999999999999864
No 312
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.97 E-value=9.1e-30 Score=278.23 Aligned_cols=236 Identities=25% Similarity=0.389 Sum_probs=184.8
Q ss_pred cccccceecccCceEEEEEEEc-CCceEEEEEechh-hHHHHHHHHHHHHHHHhcC---CCceeEEEEEEecCCeeEEEE
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQR-YERALKSFQDECEVMKRIR---HRNLVKIISACSNDDFKALIM 801 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~~~~~lv~ 801 (1007)
.|+..+.||+|+||.||+|... +++.||||.++.. .....+++.+|++++++++ |||++++++++..+...++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 4777889999999999999964 6899999998654 2344567889999999997 999999999999999999999
Q ss_pred EecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCc
Q 001838 802 EYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQ 869 (1007)
Q Consensus 802 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~ 869 (1007)
||+++++|.+++..+ .+++.....++.|++.|+.|| |+.+|+|+++ .+++|||++........
T Consensus 82 e~~~~~~L~~~~~~~--~l~~~~~~~i~~~i~~~l~~l---h~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06917 82 EYAEGGSVRTLMKAG--PIAEKYISVIIREVLVALKYI---HKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSS 156 (277)
T ss_pred ecCCCCcHHHHHHcc--CCCHHHHHHHHHHHHHHHHHH---HhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCcc
Confidence 999999999998764 588999999999999999999 5778999865 38999999987754321
Q ss_pred ccccccccCCcccccccccccC-CCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhcc
Q 001838 870 LSMQTQTLATIGYMAPEYGVQG-RVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLS 948 (1007)
Q Consensus 870 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~ 948 (1007)
......|+..|+|||++..+ .++.++|||||||++|||++|+.||..... ..+....... ..+.+..
T Consensus 157 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~-----~~~~~~~~~~-----~~~~~~~ 224 (277)
T cd06917 157 --KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDA-----FRAMMLIPKS-----KPPRLED 224 (277)
T ss_pred --ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCCh-----hhhhhccccC-----CCCCCCc
Confidence 12334689999999987654 478999999999999999999999975321 1111100000 0000000
Q ss_pred chhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 949 GEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 949 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
.....++.+++.+||+.||++||++.|++++
T Consensus 225 ---------~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 225 ---------NGYSKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred ---------ccCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 0123468899999999999999999999874
No 313
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.97 E-value=1e-29 Score=280.94 Aligned_cols=254 Identities=21% Similarity=0.251 Sum_probs=186.1
Q ss_pred cccccceecccCceEEEEEEEc-CCceEEEEEechhhH-----HHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEE
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYE-----RALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALI 800 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 800 (1007)
+|+..+.||+|+||.||+|... +|+.||||+++.... .....+..|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 4777889999999999999875 689999999975432 2335677899999999999999999999999999999
Q ss_pred EEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCC
Q 001838 801 MEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQD 868 (1007)
Q Consensus 801 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~ 868 (1007)
|||+ +|+|.+++......+++..+..++.||++||.|| |+.+|+|+++ +||+|||+++......
T Consensus 81 ~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~l---H~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~ 156 (298)
T cd07841 81 FEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYL---HSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPN 156 (298)
T ss_pred Eccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCC
Confidence 9999 8999999977554689999999999999999999 6778999865 3899999998765332
Q ss_pred cccccccccCCccccccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCc---cHH-----
Q 001838 869 QLSMQTQTLATIGYMAPEYGVQ-GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPI---SVM----- 939 (1007)
Q Consensus 869 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~---~~~----- 939 (1007)
. ......+++.|+|||.+.+ ..++.++|||||||++|||++|.+||...... ..+.+........ ...
T Consensus 157 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 233 (298)
T cd07841 157 R--KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDI-DQLGKIFEALGTPTEENWPGVTSL 233 (298)
T ss_pred c--cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccH-HHHHHHHHHcCCCchhhhhhcccc
Confidence 1 1123456888999998754 45789999999999999999998877643211 1111111111000 000
Q ss_pred -HHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 940 -EVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 940 -~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
........... ...........++.+++.+||+.+|++|||+.|++++
T Consensus 234 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 234 PDYVEFKPFPPT-PLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred cccccccccCCc-chhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 00000000000 0000111224578999999999999999999999983
No 314
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.97 E-value=1.1e-29 Score=278.66 Aligned_cols=237 Identities=22% Similarity=0.296 Sum_probs=185.7
Q ss_pred cccccceecccCceEEEEEEEc-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecC
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMP 805 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~ 805 (1007)
.|...+.||+|++|.||+|... +++.||+|+++.......+.+.+|+.++++++||||+++++++...+..++|+||++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~ 99 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLE 99 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccC
Confidence 3455679999999999999864 688999999875554455678899999999999999999999999999999999999
Q ss_pred CCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCccccc
Q 001838 806 NGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQ 873 (1007)
Q Consensus 806 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~~ 873 (1007)
+++|.+++... .+++..+..++.|++.|++|| |+.+++|+++. +++|||.+........ ..
T Consensus 100 ~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~--~~ 172 (285)
T cd06648 100 GGALTDIVTHT--RMNEEQIATVCLAVLKALSFL---HAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP--RR 172 (285)
T ss_pred CCCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCc--cc
Confidence 99999999773 478899999999999999999 57789999753 7999998876543211 11
Q ss_pred ccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhh
Q 001838 874 TQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERY 953 (1007)
Q Consensus 874 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~ 953 (1007)
....|++.|+|||+..+..++.++|||||||++|||++|+.||..... .......... ..+...
T Consensus 173 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~-----~~~~~~~~~~-----~~~~~~------ 236 (285)
T cd06648 173 KSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP-----LQAMKRIRDN-----LPPKLK------ 236 (285)
T ss_pred ccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH-----HHHHHHHHhc-----CCCCCc------
Confidence 234689999999999888899999999999999999999999864211 1111110000 000000
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 954 FAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 954 ~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
.......++.+++.+||+.+|++|||+.|+++.
T Consensus 237 --~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 269 (285)
T cd06648 237 --NLHKVSPRLRSFLDRMLVRDPAQRATAAELLNH 269 (285)
T ss_pred --ccccCCHHHHHHHHHHcccChhhCcCHHHHccC
Confidence 001123468999999999999999999999863
No 315
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.97 E-value=1.8e-29 Score=276.76 Aligned_cols=252 Identities=18% Similarity=0.229 Sum_probs=183.9
Q ss_pred ccccceecccCceEEEEEEEc-CCceEEEEEechhh-HHHHHHHHHHHHHHHhcC-CCceeEEEEEEecC--CeeEEEEE
Q 001838 728 FSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY-ERALKSFQDECEVMKRIR-HRNLVKIISACSND--DFKALIME 802 (1007)
Q Consensus 728 ~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~--~~~~lv~E 802 (1007)
|+..+.||+|+||.||+|+.. +++.||+|+++... ........+|+.++.++. ||||+++++++.+. +..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 566788999999999999865 68999999987542 112234457899999995 99999999999887 88999999
Q ss_pred ecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc-----------ccceeecceecCCCCccc
Q 001838 803 YMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA-----------HISDFSIAKFLNGQDQLS 871 (1007)
Q Consensus 803 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~-----------kl~DFGla~~~~~~~~~~ 871 (1007)
|++ |++.+.+......+++.++..++.|++.||+|| |+.+++|+++. ||+|||+++........
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~L---H~~~i~H~dl~p~ni~l~~~~~kl~dfg~~~~~~~~~~~- 155 (282)
T cd07831 81 LMD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHM---HRNGIFHRDIKPENILIKDDILKLADFGSCRGIYSKPPY- 155 (282)
T ss_pred cCC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH---HHCCceecccCHHHEEEcCCCeEEEecccccccccCCCc-
Confidence 997 588888876555689999999999999999999 56789999764 89999999876433221
Q ss_pred ccccccCCccccccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCc---cHHHHhhhhhc
Q 001838 872 MQTQTLATIGYMAPEYGVQ-GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPI---SVMEVIDTNLL 947 (1007)
Q Consensus 872 ~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~---~~~~~~d~~~~ 947 (1007)
....++..|+|||++.. ..++.++|||||||++|||++|+.||..... .....+....... .+.+.......
T Consensus 156 --~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (282)
T cd07831 156 --TEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNE--LDQIAKIHDVLGTPDAEVLKKFRKSRH 231 (282)
T ss_pred --CCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCH--HHHHHHHHHHcCCCCHHHHHhhccccc
Confidence 23457889999997654 4578999999999999999999999975321 2222222221111 11111110000
Q ss_pred cc-------hhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 948 SG-------EERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 948 ~~-------~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
.. ...........+.++.+++.+||+++|++|||+.|+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 232 MNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred ccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 00 000011122345789999999999999999999999864
No 316
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.97 E-value=2.3e-29 Score=273.16 Aligned_cols=238 Identities=22% Similarity=0.229 Sum_probs=181.8
Q ss_pred HHHHHHhccccccccee--cccCceEEEEEEEc-CCceEEEEEechhhHHHHHHHHHHHHHHHhc-CCCceeEEEEEEec
Q 001838 718 YHELLQATDRFSKNNLL--GIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKSFQDECEVMKRI-RHRNLVKIISACSN 793 (1007)
Q Consensus 718 ~~~~~~~~~~~~~~~~i--g~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~ 793 (1007)
..+.....++|+..+.+ |+|+||.||+++.+ ++..+|+|.+....... .|+.....+ +||||++++++|..
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-----~e~~~~~~~~~h~~iv~~~~~~~~ 80 (267)
T PHA03390 6 LSELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-----IEPMVHQLMKDNPNFIKLYYSVTT 80 (267)
T ss_pred HHHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-----hhHHHHHHhhcCCCEEEEEEEEec
Confidence 34555556677777776 99999999999865 68899999987542111 123222223 69999999999999
Q ss_pred CCeeEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc-------------cccceeec
Q 001838 794 DDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV-------------AHISDFSI 860 (1007)
Q Consensus 794 ~~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~-------------~kl~DFGl 860 (1007)
.+..|+||||+++|+|.+++.... .+++..+..++.|+++|+.|| |+.+++|+++ .+++|||+
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~p~nil~~~~~~~~~l~dfg~ 156 (267)
T PHA03390 81 LKGHVLIMDYIKDGDLFDLLKKEG-KLSEAEVKKIIRQLVEALNDL---HKHNIIHNDIKLENVLYDRAKDRIYLCDYGL 156 (267)
T ss_pred CCeeEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCeeeCCCCHHHEEEeCCCCeEEEecCcc
Confidence 999999999999999999997754 689999999999999999999 5678999854 47999999
Q ss_pred ceecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHH
Q 001838 861 AKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVME 940 (1007)
Q Consensus 861 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 940 (1007)
++..... ....|+..|+|||++....++.++|||||||++|||++|+.||............|..... .
T Consensus 157 ~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~---- 225 (267)
T PHA03390 157 CKIIGTP------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQ-K---- 225 (267)
T ss_pred ceecCCC------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhc-c----
Confidence 9876422 2245889999999998888999999999999999999999999854433333333322210 0
Q ss_pred HhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCC-HHHHHH
Q 001838 941 VIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRIN-AREIVT 987 (1007)
Q Consensus 941 ~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt-~~evl~ 987 (1007)
.. .........+.+++.+|++.+|.+||+ +.|+++
T Consensus 226 ----~~--------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 226 ----KL--------PFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred ----cC--------CcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 00 001123456899999999999999996 588875
No 317
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.97 E-value=1.1e-29 Score=278.51 Aligned_cols=254 Identities=22% Similarity=0.256 Sum_probs=183.5
Q ss_pred ccccceecccCceEEEEEEEc-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEec
Q 001838 728 FSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY--ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYM 804 (1007)
Q Consensus 728 ~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~ 804 (1007)
|+..+.||+|++|.||+|... +|..||||++.... ....+.+.+|++++++++||||+++++++.+++..|+||||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 567789999999999999865 69999999987443 223356888999999999999999999999999999999999
Q ss_pred CCCChhHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCccc
Q 001838 805 PNGSLENRLYSGT-CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLS 871 (1007)
Q Consensus 805 ~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~~~ 871 (1007)
+ ++|.+++.... ..+++..+..++.|+++||+||| +.+++|+++ .+++|||+++.......
T Consensus 81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH---~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~-- 154 (283)
T cd07835 81 D-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCH---SHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR-- 154 (283)
T ss_pred C-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc--
Confidence 5 68999887644 35899999999999999999995 678999865 38999999986532211
Q ss_pred ccccccCCcccccccccccC-CCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhc-Ccc-H-------HHH
Q 001838 872 MQTQTLATIGYMAPEYGVQG-RVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLL-PIS-V-------MEV 941 (1007)
Q Consensus 872 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~-~~~-~-------~~~ 941 (1007)
......++..|+|||++.+. .++.++|||||||++|||++|+.||...... ..+.+...... +.. . .+.
T Consensus 155 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (283)
T cd07835 155 TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEI-DQLFRIFRTLGTPDEDVWPGVTSLPDY 233 (283)
T ss_pred ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCChHHhhhhhhchhh
Confidence 11233568899999987664 5789999999999999999999999753211 11111111110 000 0 000
Q ss_pred hhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 942 IDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 942 ~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
................+....++.+++.+|++.+|++|||+.|+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 234 KPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred hhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 00000000000000111223568899999999999999999999863
No 318
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.96 E-value=1.1e-29 Score=279.34 Aligned_cols=241 Identities=26% Similarity=0.281 Sum_probs=180.2
Q ss_pred cccccceecccCceEEEEEEEc-CCceEEEEEechhh-HHHHHHHHHHHHHHHhcC-CCceeEEEEEEecCCeeEEEEEe
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY-ERALKSFQDECEVMKRIR-HRNLVKIISACSNDDFKALIMEY 803 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~E~ 803 (1007)
+|...+.||+|+||+||++... +|+.||||++.... ......+.+|+.++.++. |||||++++++..++..++||||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 4556788999999999999865 58999999987543 334567889999999996 99999999999999999999999
Q ss_pred cCCCChhHhh---hc-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCC
Q 001838 804 MPNGSLENRL---YS-GTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQ 867 (1007)
Q Consensus 804 ~~~gsL~~~l---~~-~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~ 867 (1007)
+.. ++.++. .. ....+++..+..++.|++.||+||| +..+++|+|++ ||+|||+++.....
T Consensus 85 ~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh--~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 161 (288)
T cd06616 85 MDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLK--EELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS 161 (288)
T ss_pred ccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh--hcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccC
Confidence 864 554433 22 2345889999999999999999997 45689999764 89999999865432
Q ss_pred CcccccccccCCcccccccccccC---CCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhh
Q 001838 868 DQLSMQTQTLATIGYMAPEYGVQG---RVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDT 944 (1007)
Q Consensus 868 ~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~ 944 (1007)
.. .....|++.|+|||++... .++.++|||||||++|||++|+.||.... ....-+....... .+
T Consensus 162 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~----~~~~~~~~~~~~~-----~~ 229 (288)
T cd06616 162 IA---KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN----SVFDQLTQVVKGD-----PP 229 (288)
T ss_pred Cc---cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc----hHHHHHhhhcCCC-----CC
Confidence 11 1234688999999998766 68999999999999999999999987532 1111011000000 00
Q ss_pred hhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 945 NLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 945 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
.+... .....+.++.+++.+|++.+|++|||+.||++.
T Consensus 230 ~~~~~------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 230 ILSNS------EEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred cCCCc------CCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000 001234568999999999999999999999886
No 319
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.96 E-value=1.3e-29 Score=284.90 Aligned_cols=256 Identities=20% Similarity=0.256 Sum_probs=185.3
Q ss_pred cccccccceecccCceEEEEEEEc-CCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCC-----ee
Q 001838 725 TDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVKIISACSNDD-----FK 797 (1007)
Q Consensus 725 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-----~~ 797 (1007)
+++|...+.||+|+||+||+|... +|+.||||++.... ......+.+|+.++++++||||+++++++.... ..
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 468999999999999999999865 68999999986432 234466888999999999999999999876543 57
Q ss_pred EEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecC
Q 001838 798 ALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLN 865 (1007)
Q Consensus 798 ~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~ 865 (1007)
|+|+||+++ ++.+++..+ .+++..+..++.|++.||+|| |+.+|+|++++ ||+|||+++...
T Consensus 84 ~lv~e~~~~-~l~~~~~~~--~l~~~~~~~i~~ql~~aL~~L---H~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~ 157 (336)
T cd07849 84 YIVQELMET-DLYKLIKTQ--HLSNDHIQYFLYQILRGLKYI---HSANVLHRDLKPSNLLLNTNCDLKICDFGLARIAD 157 (336)
T ss_pred EEEehhccc-CHHHHHhcC--CCCHHHHHHHHHHHHHHHHHH---HhCCeeccCCCHHHEEECCCCCEEECcccceeecc
Confidence 999999974 888877653 488999999999999999999 57789999764 899999998764
Q ss_pred CCCccc-ccccccCCccccccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcC----ccHH
Q 001838 866 GQDQLS-MQTQTLATIGYMAPEYGVQ-GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLP----ISVM 939 (1007)
Q Consensus 866 ~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~----~~~~ 939 (1007)
...... ......||+.|+|||++.. ..++.++|||||||++|||++|+.||..... .....++..... +...
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~--~~~~~~~~~~~~~~~~~~~~ 235 (336)
T cd07849 158 PEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDY--LHQLNLILGVLGTPSQEDLN 235 (336)
T ss_pred ccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHcCCCCHHHHH
Confidence 322111 1123468999999998755 4689999999999999999999999965321 111111111111 1111
Q ss_pred HHhhhhhc-------cchh-hhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 940 EVIDTNLL-------SGEE-RYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 940 ~~~d~~~~-------~~~~-~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
...+.... .... ......+....++.+++.+||+.+|++|||+.|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 236 CIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred HhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 11110000 0000 0000111234578999999999999999999999987
No 320
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.96 E-value=3.2e-29 Score=269.55 Aligned_cols=238 Identities=27% Similarity=0.356 Sum_probs=190.4
Q ss_pred cccccceecccCceEEEEEEEc-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecC
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMP 805 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~ 805 (1007)
+|...+.||+|++|.||+|... +++.||+|++........+.+.+|++++++++||||+++++++...+..++++||++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 3777899999999999999976 688999999987655556789999999999999999999999999999999999999
Q ss_pred CCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCccccc
Q 001838 806 NGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLSMQ 873 (1007)
Q Consensus 806 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~~~~~ 873 (1007)
+++|.+++......+++..+..++.|++.|+.|| |..+++|+++ ++|+|||.+........ .
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~l---h~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~---~ 154 (253)
T cd05122 81 GGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYL---HSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA---R 154 (253)
T ss_pred CCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHh---hcCCEecCCCCHHHEEEccCCeEEEeecccccccccccc---c
Confidence 9999999987655689999999999999999999 5688999976 48999999987754321 2
Q ss_pred ccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhh
Q 001838 874 TQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERY 953 (1007)
Q Consensus 874 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~ 953 (1007)
....|+..|+|||++....++.++||||||+++|+|++|+.||....... ........ .....
T Consensus 155 ~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~------------~~~~~--- 217 (253)
T cd05122 155 NTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMK--ALFKIATN------------GPPGL--- 217 (253)
T ss_pred cceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHH--HHHHHHhc------------CCCCc---
Confidence 34568889999999988889999999999999999999999987532110 00000000 00000
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 954 FAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 954 ~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
.........+.+++.+|++.||++|||+.|+++.
T Consensus 218 -~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 218 -RNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred -CcccccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0000113468899999999999999999999864
No 321
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.96 E-value=1.1e-31 Score=314.42 Aligned_cols=242 Identities=26% Similarity=0.334 Sum_probs=188.4
Q ss_pred hcccccccceecccCceEEEEEEE-cCCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEE
Q 001838 724 ATDRFSKNNLLGIGSFGSVYVARL-QDGMEVAVKVFHQRY--ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALI 800 (1007)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 800 (1007)
.+-++.....||.|.||.||-|.. .+|...|+|-++-.. .+..+...+|+.++..++|||+|+++|+-.+++..+|.
T Consensus 1233 V~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IF 1312 (1509)
T KOG4645|consen 1233 VTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIF 1312 (1509)
T ss_pred ceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHH
Confidence 455777789999999999999984 569999999776432 33345678999999999999999999999999999999
Q ss_pred EEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCC
Q 001838 801 MEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQD 868 (1007)
Q Consensus 801 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~ 868 (1007)
||||++|+|.+.+..++. .++.-...+..|++.|+.|| |+.+|||||++ |.+|||.|..+....
T Consensus 1313 MEyC~~GsLa~ll~~gri-~dE~vt~vyt~qll~gla~L---H~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~ 1388 (1509)
T KOG4645|consen 1313 MEYCEGGSLASLLEHGRI-EDEMVTRVYTKQLLEGLAYL---HEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNA 1388 (1509)
T ss_pred HHHhccCcHHHHHHhcch-hhhhHHHHHHHHHHHHHHHH---HhcCceecCCCccceeeecCCcEEeecccceeEecCch
Confidence 999999999999976542 45555556889999999999 68899999875 899999999886542
Q ss_pred ccc--ccccccCCcccccccccccC---CCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhh
Q 001838 869 QLS--MQTQTLATIGYMAPEYGVQG---RVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVID 943 (1007)
Q Consensus 869 ~~~--~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d 943 (1007)
+.. ......||+.|||||++.+. ....+.||||+|||+.||+||+.||.... .+..+..-|..
T Consensus 1389 ~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~d-ne~aIMy~V~~----------- 1456 (1509)
T KOG4645|consen 1389 QTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELD-NEWAIMYHVAA----------- 1456 (1509)
T ss_pred hcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhcc-chhHHHhHHhc-----------
Confidence 211 12356799999999999764 35678999999999999999999997532 22222211111
Q ss_pred hhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 944 TNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 944 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
...++.++....+-.+++.+|++.||++|.++.|+++.
T Consensus 1457 -------gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1457 -------GHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred -------cCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 11122333456678899999999999999888876654
No 322
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.96 E-value=2.3e-29 Score=276.87 Aligned_cols=233 Identities=25% Similarity=0.339 Sum_probs=186.0
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIM 801 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 801 (1007)
++|...+.||+|+||.||+|... +++.||+|++.... .+..+.+.+|++++++++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 46888999999999999999876 58999999987542 234567889999999999999999999999999999999
Q ss_pred EecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCc
Q 001838 802 EYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQ 869 (1007)
Q Consensus 802 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~ 869 (1007)
||+++|+|.+++.... .++...+..++.|++.||+|| |+.+|+|+++ .||+|||+++.....
T Consensus 81 e~~~~~~L~~~~~~~~-~l~~~~~~~~~~qil~~l~~l---H~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~-- 154 (290)
T cd05580 81 EYVPGGELFSHLRKSG-RFPEPVARFYAAQVVLALEYL---HSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR-- 154 (290)
T ss_pred ecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC--
Confidence 9999999999997653 588899999999999999999 5689999966 389999999876433
Q ss_pred ccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccc
Q 001838 870 LSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSG 949 (1007)
Q Consensus 870 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~ 949 (1007)
.....|++.|+|||.+....++.++|||||||++|||++|+.||..... ....+ ........
T Consensus 155 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~-----------~~~~~~~~-- 216 (290)
T cd05580 155 ---TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNP--IQIYE-----------KILEGKVR-- 216 (290)
T ss_pred ---CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH--HHHHH-----------HHhcCCcc--
Confidence 2334688999999998888889999999999999999999999875321 00000 00000000
Q ss_pred hhhhHHHHHHHHHHHHHHHhhcCCCCCCCCC-----CHHHHHHH
Q 001838 950 EERYFAAKEQSLLSILNLATECTIESPGKRI-----NAREIVTG 988 (1007)
Q Consensus 950 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~evl~~ 988 (1007)
.+......+.+++.+||+.+|++|| +++|+++.
T Consensus 217 ------~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~ 254 (290)
T cd05580 217 ------FPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNH 254 (290)
T ss_pred ------CCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcC
Confidence 0011134678999999999999999 77777654
No 323
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.96 E-value=1.5e-29 Score=284.76 Aligned_cols=258 Identities=22% Similarity=0.280 Sum_probs=186.1
Q ss_pred hcccccccceecccCceEEEEEEEc-CCceEEEEEechh--hHHHHHHHHHHHHHHHhc-CCCceeEEEEEEecC--Cee
Q 001838 724 ATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQR--YERALKSFQDECEVMKRI-RHRNLVKIISACSND--DFK 797 (1007)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~--~~~ 797 (1007)
..++|...+.||+|+||.||+|... +|+.||||++... .......+.+|+.+++++ +||||++++++|... ...
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 3467888999999999999999876 5889999988542 223345677899999999 999999999998654 368
Q ss_pred EEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecC
Q 001838 798 ALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLN 865 (1007)
Q Consensus 798 ~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~ 865 (1007)
|+||||++ ++|.+++..+ .+++..+..++.|++.||+|| |+.+|+|++++ ||+|||+++...
T Consensus 85 ~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~L---H~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~ 158 (337)
T cd07852 85 YLVFEYME-TDLHAVIRAN--ILEDVHKRYIMYQLLKALKYI---HSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLS 158 (337)
T ss_pred EEEecccc-cCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEEcCCCcEEEeeccchhccc
Confidence 99999997 5999988765 578889999999999999999 56799999663 899999998765
Q ss_pred CCCcc---cccccccCCccccccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhh--cCc---
Q 001838 866 GQDQL---SMQTQTLATIGYMAPEYGVQ-GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDL--LPI--- 936 (1007)
Q Consensus 866 ~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~--~~~--- 936 (1007)
..... .......|+..|+|||++.. ..++.++|||||||++|||+||+.||......+ ...+..... .+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~-~~~~~~~~~~~~~~~~~ 237 (337)
T cd07852 159 ELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLN-QLEKIIEVIGPPSAEDI 237 (337)
T ss_pred cccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCCHHHH
Confidence 33221 12233568999999998765 457899999999999999999999997532211 011111000 000
Q ss_pred ------cHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 937 ------SVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 937 ------~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
...+.++...................++.+++.+|++.+|++|||+.|+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 238 ESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 0011111000000000011111234578999999999999999999999986
No 324
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.96 E-value=3.6e-29 Score=279.16 Aligned_cols=258 Identities=19% Similarity=0.240 Sum_probs=183.5
Q ss_pred cccccceecccCceEEEEEEEc---CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecC--CeeE
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQ---DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIISACSND--DFKA 798 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~---~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~ 798 (1007)
+|+..+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|+.++++++||||+++++++.+. +..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 4778899999999999999865 47899999997632 23345678899999999999999999999988 7899
Q ss_pred EEEEecCCCChhHhhhcC----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc----------------ccccee
Q 001838 799 LIMEYMPNGSLENRLYSG----TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV----------------AHISDF 858 (1007)
Q Consensus 799 lv~E~~~~gsL~~~l~~~----~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~----------------~kl~DF 858 (1007)
+||||+++ ++.+.+... ...++...+..++.|++.|++|| |+.+|+|+++ .|++||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYL---HSNWVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHH---HhCCEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999975 677666432 22578889999999999999999 5778999854 479999
Q ss_pred ecceecCCCCc-ccccccccCCcccccccccccC-CCCchhhHHHHHHHHHHHHhCCCCCCccccCc--------chHHH
Q 001838 859 SIAKFLNGQDQ-LSMQTQTLATIGYMAPEYGVQG-RVSTRGDVYSYGIMLMETFTGKKPTDEIFIGE--------LSLSR 928 (1007)
Q Consensus 859 Gla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~--------~~l~~ 928 (1007)
|+++....... ........+++.|+|||++.+. .++.++|||||||++|||++|+.||....... ..+..
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (316)
T cd07842 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER 236 (316)
T ss_pred ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHH
Confidence 99987643322 1122345688999999987664 58999999999999999999999997543322 01111
Q ss_pred HHHhhcCccH------------HHHhhhhh---ccchhhhHHHHH--HHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 929 WVNDLLPISV------------MEVIDTNL---LSGEERYFAAKE--QSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 929 ~~~~~~~~~~------------~~~~d~~~---~~~~~~~~~~~~--~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
++........ ....+... ............ ....++.+++.+|++.||++|||+.|++++
T Consensus 237 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~ 313 (316)
T cd07842 237 IFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH 313 (316)
T ss_pred HHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 1111110000 00000000 000000000000 234578999999999999999999999863
No 325
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.96 E-value=3.9e-29 Score=274.35 Aligned_cols=254 Identities=20% Similarity=0.264 Sum_probs=185.0
Q ss_pred cccccceecccCceEEEEEEEc-CCceEEEEEechhhH-HHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEec
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYE-RALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYM 804 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~ 804 (1007)
+|+..+.||+|++|+||+|+.. +|+.||||+++.... ...+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 4788899999999999999976 589999999875432 22356778999999999999999999999999999999999
Q ss_pred CCCChhHhhhcCC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcc
Q 001838 805 PNGSLENRLYSGT--CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQL 870 (1007)
Q Consensus 805 ~~gsL~~~l~~~~--~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~ 870 (1007)
++ +|.+++.... ..+++..+..++.|++.||+|| |+.+++|+++. |++|||+++.......
T Consensus 81 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~- 155 (284)
T cd07836 81 DK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFC---HENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN- 155 (284)
T ss_pred Cc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHH---HHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc-
Confidence 85 8988886543 4589999999999999999999 56789999663 8999999986532211
Q ss_pred cccccccCCcccccccccccC-CCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhc-C--ccHHHHhh---
Q 001838 871 SMQTQTLATIGYMAPEYGVQG-RVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLL-P--ISVMEVID--- 943 (1007)
Q Consensus 871 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~-~--~~~~~~~d--- 943 (1007)
......++..|+|||++.+. .++.++|||||||++|||++|+.||......+ ...+...... + .......+
T Consensus 156 -~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd07836 156 -TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNED-QLLKIFRIMGTPTESTWPGISQLPE 233 (284)
T ss_pred -ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCCCChhhHHHHhcCch
Confidence 11234578899999987654 57899999999999999999999997543211 1111111100 0 00000000
Q ss_pred --hhhcc-chhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001838 944 --TNLLS-GEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVT 987 (1007)
Q Consensus 944 --~~~~~-~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~ 987 (1007)
..... .........+....++.+++.+|++.||++||++.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 234 YKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred hcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00000 000001111223467889999999999999999999985
No 326
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.96 E-value=3.2e-29 Score=278.83 Aligned_cols=260 Identities=20% Similarity=0.274 Sum_probs=182.1
Q ss_pred cccccccceecccCceEEEEEEEc-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCC------
Q 001838 725 TDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY--ERALKSFQDECEVMKRIRHRNLVKIISACSNDD------ 795 (1007)
Q Consensus 725 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------ 795 (1007)
.++|+..+.||+|+||.||+|... +++.||||++.... ......+.+|++++++++||||++++++|...+
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 357999999999999999999875 58999999986432 122345678999999999999999999987654
Q ss_pred --eeEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecc
Q 001838 796 --FKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIA 861 (1007)
Q Consensus 796 --~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla 861 (1007)
..++||||+.+ ++.+++......+++.++..++.|++.||+||| +.+++|+++ +||+|||++
T Consensus 91 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~ 166 (310)
T cd07865 91 KGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIH---RNKILHRDMKAANILITKDGILKLADFGLA 166 (310)
T ss_pred CceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEECCCCcEEECcCCCc
Confidence 35999999974 888888766556899999999999999999994 668999865 389999999
Q ss_pred eecCCCCcc--cccccccCCcccccccccccC-CCCchhhHHHHHHHHHHHHhCCCCCCccccCc-chHHHHHHhhcCcc
Q 001838 862 KFLNGQDQL--SMQTQTLATIGYMAPEYGVQG-RVSTRGDVYSYGIMLMETFTGKKPTDEIFIGE-LSLSRWVNDLLPIS 937 (1007)
Q Consensus 862 ~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~-~~l~~~~~~~~~~~ 937 (1007)
......... .......++..|+|||++.+. .++.++|||||||++|||+||+.||....... ......+....+..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (310)
T cd07865 167 RAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPE 246 (310)
T ss_pred ccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChh
Confidence 876432211 111234578899999987654 37899999999999999999999987532111 00011110000100
Q ss_pred H------HHHhhhhhccchhh-hHH---HHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 938 V------MEVIDTNLLSGEER-YFA---AKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 938 ~------~~~~d~~~~~~~~~-~~~---~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
. .+..+......... ... ........+.+++.+||..||++|||++|++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h 307 (310)
T cd07865 247 VWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307 (310)
T ss_pred hcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence 0 00000000000000 000 000012357899999999999999999999864
No 327
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.96 E-value=4.4e-29 Score=272.79 Aligned_cols=230 Identities=20% Similarity=0.263 Sum_probs=172.4
Q ss_pred eecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHh---cCCCceeEEEEEEecCCeeEEEEEecC
Q 001838 733 LLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKR---IRHRNLVKIISACSNDDFKALIMEYMP 805 (1007)
Q Consensus 733 ~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~---l~H~niv~l~~~~~~~~~~~lv~E~~~ 805 (1007)
.||+|+||.||+|... +|+.||||.+.... ......+.+|..+++. .+||||+.+++++..++..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999875 58999999886532 1222334455544443 469999999999999999999999999
Q ss_pred CCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCccccc
Q 001838 806 NGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQ 873 (1007)
Q Consensus 806 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~~ 873 (1007)
+|+|.+++.... .+++..+..++.|++.||+|| |+.+|+|+|++ +++|||++....... .
T Consensus 81 ~~~L~~~i~~~~-~l~~~~~~~i~~qi~~al~~l---H~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~----~ 152 (279)
T cd05633 81 GGDLHYHLSQHG-VFSEKEMRFYATEIILGLEHM---HNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK----P 152 (279)
T ss_pred CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccC----c
Confidence 999999987654 489999999999999999999 56789999764 799999997653221 1
Q ss_pred ccccCCccccccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhh
Q 001838 874 TQTLATIGYMAPEYGVQ-GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEER 952 (1007)
Q Consensus 874 ~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~ 952 (1007)
....|+..|+|||.... ..++.++|||||||++|||++|+.||......... ....... ....
T Consensus 153 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~---~~~~~~~-----~~~~-------- 216 (279)
T cd05633 153 HASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH---EIDRMTL-----TVNV-------- 216 (279)
T ss_pred cCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHH---HHHHHhh-----cCCc--------
Confidence 23468999999998864 55899999999999999999999999753221111 0100000 0000
Q ss_pred hHHHHHHHHHHHHHHHhhcCCCCCCCCC-----CHHHHHHH
Q 001838 953 YFAAKEQSLLSILNLATECTIESPGKRI-----NAREIVTG 988 (1007)
Q Consensus 953 ~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~evl~~ 988 (1007)
..++....++.+++.+|++.||++|| |++|++++
T Consensus 217 --~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 217 --ELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred --CCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 00112245688999999999999999 59988876
No 328
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.96 E-value=5.1e-30 Score=264.50 Aligned_cols=257 Identities=22% Similarity=0.262 Sum_probs=204.3
Q ss_pred HHHHhcccccccceecccCceEEEEEEEc------CCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeEEEEEEe
Q 001838 720 ELLQATDRFSKNNLLGIGSFGSVYVARLQ------DGMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVKIISACS 792 (1007)
Q Consensus 720 ~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~ 792 (1007)
++.....+++....+-+|.||.||+|.+. +.+.|-||.++... +-....+..|...+..+.|||+.++.+++.
T Consensus 278 ~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~i 357 (563)
T KOG1024|consen 278 ELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSI 357 (563)
T ss_pred hhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEe
Confidence 34444556777788999999999999654 34567788887653 344577899999999999999999999886
Q ss_pred c-CCeeEEEEEecCCCChhHhhhc-------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc-----------
Q 001838 793 N-DDFKALIMEYMPNGSLENRLYS-------GTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA----------- 853 (1007)
Q Consensus 793 ~-~~~~~lv~E~~~~gsL~~~l~~-------~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~----------- 853 (1007)
+ .+..+..|.++.-|+|..+|.. ....+...+...++.|++.|++|| |+.+|||.|++
T Consensus 358 e~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hl---h~~~ViHkDiAaRNCvIdd~Lq 434 (563)
T KOG1024|consen 358 EDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHL---HNHGVIHKDIAARNCVIDDQLQ 434 (563)
T ss_pred eccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHH---HhcCcccchhhhhcceehhhee
Confidence 5 4578899999999999999972 123466678888999999999999 78899999875
Q ss_pred -ccceeecceecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHH
Q 001838 854 -HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVN 931 (1007)
Q Consensus 854 -kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~ 931 (1007)
|++|=.++|.+.+.+.............||+||.+....|+.++|||||||++|||.| |+.||.+....+
T Consensus 435 VkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfE-------- 506 (563)
T KOG1024|consen 435 VKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFE-------- 506 (563)
T ss_pred EEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHH--------
Confidence 8999999998877666554445556788999999999999999999999999999998 999987642211
Q ss_pred hhcCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHhhhc
Q 001838 932 DLLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKIRDTLVKS 999 (1007)
Q Consensus 932 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~~~~~~~ 999 (1007)
+...+ . ++.+..++-.++.+++.+|.-||...|++||++++++..|.+....+.++
T Consensus 507 ------m~~yl----k--dGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~qlt~Y 562 (563)
T KOG1024|consen 507 ------MEHYL----K--DGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQLTRY 562 (563)
T ss_pred ------HHHHH----h--ccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHHhhc
Confidence 11111 1 12223345567889999999999999999999999999999988776654
No 329
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.96 E-value=2.6e-29 Score=277.02 Aligned_cols=256 Identities=22% Similarity=0.225 Sum_probs=184.8
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecC--CeeEEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY--ERALKSFQDECEVMKRIRHRNLVKIISACSND--DFKALI 800 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lv 800 (1007)
++|+..+.||+|+||.||+|... +++.||+|.++... ......+.+|+.++++++||||+++++++... +..|+|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 56888899999999999999976 58899999997443 22234577899999999999999999998877 789999
Q ss_pred EEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCC
Q 001838 801 MEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQD 868 (1007)
Q Consensus 801 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~ 868 (1007)
|||++ ++|.+++......+++..+..++.|++.||+|| |+.+++|+++ +|++|||+++......
T Consensus 85 ~e~~~-~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~L---H~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 160 (293)
T cd07843 85 MEYVE-HDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHL---HDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPL 160 (293)
T ss_pred ehhcC-cCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH---HHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCc
Confidence 99997 499998876655689999999999999999999 5678999865 4899999998765332
Q ss_pred cccccccccCCcccccccccccCC-CCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhc-C-ccHHHHh-h-
Q 001838 869 QLSMQTQTLATIGYMAPEYGVQGR-VSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLL-P-ISVMEVI-D- 943 (1007)
Q Consensus 869 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~-~-~~~~~~~-d- 943 (1007)
. ......+++.|+|||++.+.. ++.++|||||||++|||++|+.||....... ...+...... + ....... +
T Consensus 161 ~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 237 (293)
T cd07843 161 K--PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEID-QLNKIFKLLGTPTEKIWPGFSEL 237 (293)
T ss_pred c--ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCchHHHHHhhcc
Confidence 1 123345788999999886544 6899999999999999999999997532111 1111111000 0 0000000 0
Q ss_pred -----hhhccc-h-hhhHHHHHH-HHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 944 -----TNLLSG-E-ERYFAAKEQ-SLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 944 -----~~~~~~-~-~~~~~~~~~-~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
...... . ......+.. ....+.+++.+|++.+|++|||+.|+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 238 PGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred chhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 000000 0 000000000 24568899999999999999999999863
No 330
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.96 E-value=6.1e-29 Score=268.50 Aligned_cols=240 Identities=25% Similarity=0.320 Sum_probs=190.3
Q ss_pred cccccceecccCceEEEEEEEc-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecC--CeeEEEE
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY--ERALKSFQDECEVMKRIRHRNLVKIISACSND--DFKALIM 801 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lv~ 801 (1007)
+|+..+.||+|++|.||+|... +++.|++|++.... ....+.+.+|++++++++||||+++++++... +..++||
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4777899999999999999976 68999999987654 24567889999999999999999999999988 8899999
Q ss_pred EecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCc
Q 001838 802 EYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQ 869 (1007)
Q Consensus 802 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~ 869 (1007)
||+++++|.+++.... .+++..+..++.|+++|++||| +.+++|+++ .+|+|||.+........
T Consensus 81 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh---~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 156 (260)
T cd06606 81 EYVSGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYLH---SNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIET 156 (260)
T ss_pred EecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEcccccEEecccccc
Confidence 9999999999998655 6899999999999999999994 688999866 38999999998764432
Q ss_pred ccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccc
Q 001838 870 LSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSG 949 (1007)
Q Consensus 870 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~ 949 (1007)
........++..|+|||......++.++||||||+++|+|++|+.||..... ........ ...
T Consensus 157 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~~~~~~--------~~~----- 219 (260)
T cd06606 157 GEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGN----PMAALYKI--------GSS----- 219 (260)
T ss_pred cccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc----hHHHHHhc--------ccc-----
Confidence 1112345688899999999888899999999999999999999999975320 00000000 000
Q ss_pred hhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 950 EERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 950 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
......+.....++.+++.+|++.+|++||++.|+++.
T Consensus 220 -~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 220 -GEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred -CCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence 00000111224568999999999999999999999864
No 331
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.96 E-value=3.1e-29 Score=276.58 Aligned_cols=256 Identities=20% Similarity=0.233 Sum_probs=182.8
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY--ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIME 802 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E 802 (1007)
++|+..+.||+|++|+||+|... +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..|+|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 57888999999999999999876 68999999986532 2334568899999999999999999999999999999999
Q ss_pred ecCCCChhHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc-------------cccceeecceecCCCC
Q 001838 803 YMPNGSLENRLYSGT-CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV-------------AHISDFSIAKFLNGQD 868 (1007)
Q Consensus 803 ~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~-------------~kl~DFGla~~~~~~~ 868 (1007)
|++ +++.+++.... ...++.....++.||+.||+|| |+.+++|+++ .|++|||+++......
T Consensus 82 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~L---H~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~ 157 (294)
T PLN00009 82 YLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYC---HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV 157 (294)
T ss_pred ccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHH---HhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCc
Confidence 996 58888775433 2357788889999999999999 5678999854 3799999998653221
Q ss_pred cccccccccCCcccccccccccC-CCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhc-C-ccH-------
Q 001838 869 QLSMQTQTLATIGYMAPEYGVQG-RVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLL-P-ISV------- 938 (1007)
Q Consensus 869 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~-~-~~~------- 938 (1007)
...+...+++.|+|||++.+. .++.++|||||||++|||+||+.||......+ .+.+...... + ...
T Consensus 158 --~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 234 (294)
T PLN00009 158 --RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEID-ELFKIFRILGTPNEETWPGVTSL 234 (294)
T ss_pred --cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCChhhccccccc
Confidence 111334578899999988664 57899999999999999999999997532111 1111000000 0 000
Q ss_pred HHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 939 MEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 939 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
.+.................+....++.+++.+|++.+|++||++.|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 235 PDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred hhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000000000000000011224568899999999999999999999874
No 332
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.96 E-value=3.8e-29 Score=279.65 Aligned_cols=257 Identities=22% Similarity=0.292 Sum_probs=186.5
Q ss_pred HHHHhcccccccceecccCceEEEEEEEc-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeEEEEEEec-CC
Q 001838 720 ELLQATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY--ERALKSFQDECEVMKRIRHRNLVKIISACSN-DD 795 (1007)
Q Consensus 720 ~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~ 795 (1007)
++...+++|+..+.||+|+||.||+|... +|+.||||++.... ....+.+.+|++++++++||||++++++|.. .+
T Consensus 4 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 83 (328)
T cd07856 4 TVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLE 83 (328)
T ss_pred ceeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCC
Confidence 45567889999999999999999999865 69999999886422 2234667889999999999999999999875 55
Q ss_pred eeEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeeccee
Q 001838 796 FKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKF 863 (1007)
Q Consensus 796 ~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~ 863 (1007)
..|+||||+ +++|.+++... .+++.....++.|++.||+|| |+.+|+|+++ .|++|||.++.
T Consensus 84 ~~~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~~ql~~aL~~L---H~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~ 157 (328)
T cd07856 84 DIYFVTELL-GTDLHRLLTSR--PLEKQFIQYFLYQILRGLKYV---HSAGVVHRDLKPSNILINENCDLKICDFGLARI 157 (328)
T ss_pred cEEEEeehh-ccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCHHHEeECCCCCEEeCccccccc
Confidence 789999999 56899888653 367888888999999999999 5778999965 38999999986
Q ss_pred cCCCCcccccccccCCccccccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHH-----------HHHH
Q 001838 864 LNGQDQLSMQTQTLATIGYMAPEYGVQ-GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLS-----------RWVN 931 (1007)
Q Consensus 864 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~-----------~~~~ 931 (1007)
.... .....++..|+|||++.+ ..++.++|||||||++|||+||+.||..... ..... +|..
T Consensus 158 ~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~ 231 (328)
T cd07856 158 QDPQ-----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDH-VNQFSIITDLLGTPPDDVIN 231 (328)
T ss_pred cCCC-----cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHHHH
Confidence 5321 123457889999998766 5689999999999999999999999964321 00111 1111
Q ss_pred hhcCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 932 DLLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 932 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
........+.+....................++.+++.+|++.+|++|||+.|++..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 232 TICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred hccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 111111111111000000000000011224578999999999999999999999876
No 333
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.96 E-value=3.6e-29 Score=276.28 Aligned_cols=256 Identities=20% Similarity=0.214 Sum_probs=181.7
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhhH--HHHHHHHHHHHHHHhcC-CCceeEEEEEEecCCe-----
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYE--RALKSFQDECEVMKRIR-HRNLVKIISACSNDDF----- 796 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~----- 796 (1007)
++|+..+.||+|+||.||+|... +|+.||||+++.... ...+.+.+|+.++++++ ||||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 46888999999999999999975 689999999865432 22356888999999995 6999999999987665
Q ss_pred eEEEEEecCCCChhHhhhcC----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc-------------cccceee
Q 001838 797 KALIMEYMPNGSLENRLYSG----TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV-------------AHISDFS 859 (1007)
Q Consensus 797 ~~lv~E~~~~gsL~~~l~~~----~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~-------------~kl~DFG 859 (1007)
.|+||||+++ ++.+++... ...+++..+..++.||+.||.|| |+.+|+|+++ +|++|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~L---H~~~i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHC---HKHGVMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeecCCChHHEEEecCCCeEEEeecc
Confidence 8999999985 898888643 23578999999999999999999 5778999865 3899999
Q ss_pred cceecCCCCcccccccccCCccccccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhc-Cc-
Q 001838 860 IAKFLNGQDQLSMQTQTLATIGYMAPEYGVQ-GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLL-PI- 936 (1007)
Q Consensus 860 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~-~~- 936 (1007)
+++....... ......+++.|+|||++.+ ..++.++|||||||++|||++|+.||....... .+.+...... +.
T Consensus 157 ~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~ 233 (295)
T cd07837 157 LGRAFSIPVK--SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQ-QLLHIFKLLGTPTE 233 (295)
T ss_pred cceecCCCcc--ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHHHhCCCCh
Confidence 9986532211 1123357889999998765 457999999999999999999999987532111 0111111000 00
Q ss_pred c----HHHHhhhhhccc--hhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 937 S----VMEVIDTNLLSG--EERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 937 ~----~~~~~d~~~~~~--~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
. ..+..+...... ........+....++.+++.+|++++|++||++.|++.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 234 QVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred hhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0 000000000000 000000112234678999999999999999999999863
No 334
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.96 E-value=1.6e-29 Score=283.86 Aligned_cols=258 Identities=20% Similarity=0.227 Sum_probs=186.8
Q ss_pred cccccccceecccCceEEEEEEEc-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeEEEEEEec----CCee
Q 001838 725 TDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY--ERALKSFQDECEVMKRIRHRNLVKIISACSN----DDFK 797 (1007)
Q Consensus 725 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~~ 797 (1007)
.++|+..+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|+.++++++||||+++++++.. ....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 368999999999999999999865 69999999987542 2334667889999999999999999998763 3468
Q ss_pred EEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecC
Q 001838 798 ALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLN 865 (1007)
Q Consensus 798 ~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~ 865 (1007)
++||||+. |+|.+++.... .+++..+..++.|++.||.|| |+.+|+|++++ ||+|||+++...
T Consensus 84 ~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 158 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSDQ-PLTEEHIRYFLYQLLRGLKYI---HSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLS 158 (334)
T ss_pred EEEEehhh-hhHHHHhccCC-CCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEEcCCCcEEecccccceeec
Confidence 99999996 68999887554 489999999999999999999 56789999764 899999998764
Q ss_pred CCCcc--cccccccCCccccccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCc------
Q 001838 866 GQDQL--SMQTQTLATIGYMAPEYGVQ-GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPI------ 936 (1007)
Q Consensus 866 ~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~------ 936 (1007)
..... .......|+..|+|||.+.. ..++.++|||||||++|||++|+.||...... .....+......
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~--~~~~~~~~~~g~~~~~~~ 236 (334)
T cd07855 159 SSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYV--HQLKLILSVLGSPSEEVL 236 (334)
T ss_pred ccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChH--HHHHHHHHHhCCChhHhh
Confidence 32211 11123468899999998765 45899999999999999999999999753211 111111111110
Q ss_pred ------cHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 001838 937 ------SVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGL 989 (1007)
Q Consensus 937 ------~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L 989 (1007)
...+..+..-...........+..+.++.+++.+|++.+|++|||+.|++++-
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~ 295 (334)
T cd07855 237 NRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHP 295 (334)
T ss_pred hhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhCh
Confidence 11111110000000000001122356799999999999999999999998863
No 335
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.96 E-value=9.9e-30 Score=274.81 Aligned_cols=235 Identities=23% Similarity=0.347 Sum_probs=186.8
Q ss_pred cccccceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEE
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIME 802 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E 802 (1007)
+|+..+.||.|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4788899999999999999976 58999999997543 2445788999999999999999999999999999999999
Q ss_pred ecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcc
Q 001838 803 YMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQL 870 (1007)
Q Consensus 803 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~ 870 (1007)
|+++++|.+++... ..+++..+..++.|+++|+.|| |+.+++|+++. +++|||++.......
T Consensus 81 ~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~l---h~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~-- 154 (258)
T cd05578 81 LLLGGDLRYHLSQK-VKFSEEQVKFWICEIVLALEYL---HSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT-- 154 (258)
T ss_pred CCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHH---HhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc--
Confidence 99999999999765 3588999999999999999999 56789998653 899999998764332
Q ss_pred cccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccch
Q 001838 871 SMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGE 950 (1007)
Q Consensus 871 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~ 950 (1007)
......|+..|+|||++....++.++||||||+++|+|++|+.||...... ...+.... ... .
T Consensus 155 -~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~~~~~~~--------~~~----~- 217 (258)
T cd05578 155 -LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT---IRDQIRAK--------QET----A- 217 (258)
T ss_pred -cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc---HHHHHHHH--------hcc----c-
Confidence 123456888999999998888999999999999999999999999854221 11111110 000 0
Q ss_pred hhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCH--HHHH
Q 001838 951 ERYFAAKEQSLLSILNLATECTIESPGKRINA--REIV 986 (1007)
Q Consensus 951 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~--~evl 986 (1007)
....+...+.++.+++.+||+.||.+||++ +|++
T Consensus 218 --~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 218 --DVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred --cccCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 000111224578899999999999999999 6654
No 336
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.96 E-value=4.2e-29 Score=278.57 Aligned_cols=240 Identities=25% Similarity=0.347 Sum_probs=186.1
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIM 801 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 801 (1007)
++|+..+.||+|+||+||+|... +++.||+|.+.... ....+.+.+|++++++++||||+++++++.+.+..|+||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 36888899999999999999876 48999999997543 134567899999999999999999999999999999999
Q ss_pred EecCCCChhHhhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCC
Q 001838 802 EYMPNGSLENRLYSG-TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQD 868 (1007)
Q Consensus 802 E~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~ 868 (1007)
||+++++|.+++... ...+++..+..++.|++.||+|| |+.+++|++++ +++|||++.......
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~ 157 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYL---HLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEP 157 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHH---HHCCeeccCCChHHeEEcCCCCEEEeecchhhcccccc
Confidence 999999999998754 24588999999999999999999 57789999764 799999987653211
Q ss_pred cc---------------------------cccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCcccc
Q 001838 869 QL---------------------------SMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFI 921 (1007)
Q Consensus 869 ~~---------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~ 921 (1007)
.. .......||..|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~ 237 (316)
T cd05574 158 PPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR 237 (316)
T ss_pred cccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCch
Confidence 10 001123688899999999888899999999999999999999999975321
Q ss_pred CcchHHHHHHhhcCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCC----HHHHHH
Q 001838 922 GELSLSRWVNDLLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRIN----AREIVT 987 (1007)
Q Consensus 922 ~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt----~~evl~ 987 (1007)
.. .+ .+..+....... ......++.+++.+|++.+|++||| +.|+++
T Consensus 238 ~~----~~---------~~~~~~~~~~~~------~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 238 DE----TF---------SNILKKEVTFPG------SPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred HH----HH---------HHHhcCCccCCC------ccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 11 11 111111100000 0012457899999999999999999 555555
No 337
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.96 E-value=3.1e-29 Score=278.63 Aligned_cols=257 Identities=25% Similarity=0.236 Sum_probs=184.3
Q ss_pred cccccccceecccCceEEEEEEEc-CCceEEEEEechhhH--HHHHHHHHHHHHHHhcCCCceeEEEEEEecC--CeeEE
Q 001838 725 TDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYE--RALKSFQDECEVMKRIRHRNLVKIISACSND--DFKAL 799 (1007)
Q Consensus 725 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~l 799 (1007)
.++|+..+.||+|+||.||+|... +|+.||+|+++.... .....+.+|++++++++|+||+++++++... +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 467999999999999999999975 589999999864321 1223466899999999999999999998765 46899
Q ss_pred EEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCC
Q 001838 800 IMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQ 867 (1007)
Q Consensus 800 v~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~ 867 (1007)
||||+++ +|.+++......+++.++..++.|++.|++|| |+.+++|++++ ||+|||+++.....
T Consensus 86 v~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~ 161 (309)
T cd07845 86 VMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYL---HENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLP 161 (309)
T ss_pred EEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEECCCCCEEECccceeeecCCc
Confidence 9999974 89888876556689999999999999999999 56789999763 89999999876533
Q ss_pred CcccccccccCCccccccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhc--CccHHHHhhh
Q 001838 868 DQLSMQTQTLATIGYMAPEYGVQ-GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLL--PISVMEVIDT 944 (1007)
Q Consensus 868 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~--~~~~~~~~d~ 944 (1007)
.. ..+...+++.|+|||++.+ ..++.++||||+||++|||++|+.||......+ .+........ .......++.
T Consensus 162 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
T cd07845 162 AK--PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIE-QLDLIIQLLGTPNESIWPGFSD 238 (309)
T ss_pred cC--CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCChhhchhhhc
Confidence 21 1223346788999998865 457999999999999999999999997532211 1111111000 0000000000
Q ss_pred ------hhcc--chhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 945 ------NLLS--GEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 945 ------~~~~--~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
.... ..............++.+++.+|++.||++|||+.|++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 239 LPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred ccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0000 0000000001124567899999999999999999999874
No 338
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.96 E-value=3.9e-29 Score=275.99 Aligned_cols=241 Identities=24% Similarity=0.268 Sum_probs=182.1
Q ss_pred ccccccceecccCceEEEEEEEcC-CceEEEEEechhh-HHHHHHHHHHHHHHHhcC-CCceeEEEEEEecCCeeEEEEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRY-ERALKSFQDECEVMKRIR-HRNLVKIISACSNDDFKALIME 802 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~~-g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~E 802 (1007)
++|+..+.||+|+||+||+|...+ ++.||||+++... ......+..|++++.+.. ||||++++++|.++...|+|||
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e 94 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICME 94 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEee
Confidence 567888999999999999999875 8999999997542 233456777888777775 9999999999999999999999
Q ss_pred ecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCcc
Q 001838 803 YMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQL 870 (1007)
Q Consensus 803 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~~ 870 (1007)
|++ +++.+++......+++..+.+++.|++.|++|||. ..+|+|+++ .||+|||++........
T Consensus 95 ~~~-~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~--~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~- 170 (296)
T cd06618 95 LMS-TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKE--KHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKA- 170 (296)
T ss_pred ccC-cCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh--hCCEecCCCcHHHEEEcCCCCEEECccccchhccCCCc-
Confidence 985 47777776544568999999999999999999962 358999965 38999999986643221
Q ss_pred cccccccCCcccccccccccCC----CCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhh
Q 001838 871 SMQTQTLATIGYMAPEYGVQGR----VSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNL 946 (1007)
Q Consensus 871 ~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~ 946 (1007)
.....++..|+|||++.... ++.++|||||||++|||++|+.||.........+..+.....+ ..
T Consensus 171 --~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~---------~~ 239 (296)
T cd06618 171 --KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPP---------SL 239 (296)
T ss_pred --ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCC---------CC
Confidence 12345788999999987553 7899999999999999999999997532111111111111000 00
Q ss_pred ccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 001838 947 LSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGL 989 (1007)
Q Consensus 947 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L 989 (1007)
.. ......++.+++.+||+.||++||++.|++++-
T Consensus 240 -~~-------~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~ 274 (296)
T cd06618 240 -PP-------NEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHP 274 (296)
T ss_pred -CC-------CCCCCHHHHHHHHHHccCChhhCCCHHHHhcCh
Confidence 00 001234689999999999999999999998774
No 339
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.96 E-value=2.8e-29 Score=276.12 Aligned_cols=233 Identities=24% Similarity=0.318 Sum_probs=182.6
Q ss_pred cceecccCceEEEEEEEc-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecCCCCh
Q 001838 731 NNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSL 809 (1007)
Q Consensus 731 ~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~gsL 809 (1007)
...||+|+||.||+|... +|..||||++........+.+.+|+.++++++|+||+++++++...+..++||||+++++|
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 104 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 104 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcH
Confidence 367999999999999875 6899999998755445557789999999999999999999999999999999999999999
Q ss_pred hHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCccccccccc
Q 001838 810 ENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTL 877 (1007)
Q Consensus 810 ~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~~~~~~ 877 (1007)
.+++... .+++.....++.|++.|++|| |+.+++|++++ +++|||++........ ......
T Consensus 105 ~~~~~~~--~~~~~~~~~~~~ql~~~l~~l---H~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~--~~~~~~ 177 (292)
T cd06657 105 TDIVTHT--RMNEEQIAAVCLAVLKALSVL---HAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--RRKSLV 177 (292)
T ss_pred HHHHhcC--CCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEECCCCCEEEcccccceecccccc--cccccc
Confidence 9988654 378889999999999999999 56789999653 7999999886643221 113356
Q ss_pred CCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhhHHHH
Q 001838 878 ATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYFAAK 957 (1007)
Q Consensus 878 gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 957 (1007)
|+++|+|||++....++.++|||||||++|||++|+.||..... ...........+.. ... .
T Consensus 178 ~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~--~~~~~~~~~~~~~~--------~~~--------~ 239 (292)
T cd06657 178 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMKMIRDNLPPK--------LKN--------L 239 (292)
T ss_pred cCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhhCCcc--------cCC--------c
Confidence 88999999998888899999999999999999999999864211 11111111111100 000 0
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 958 EQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 958 ~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
.....++.+++.+||+.+|.+||++.|++++
T Consensus 240 ~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~ 270 (292)
T cd06657 240 HKVSPSLKGFLDRLLVRDPAQRATAAELLKH 270 (292)
T ss_pred ccCCHHHHHHHHHHHhCCcccCcCHHHHhcC
Confidence 1123357889999999999999999999874
No 340
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.96 E-value=6.1e-29 Score=273.16 Aligned_cols=255 Identities=25% Similarity=0.286 Sum_probs=185.4
Q ss_pred ccccceecccCceEEEEEEEc-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecC--CeeEEEEE
Q 001838 728 FSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY--ERALKSFQDECEVMKRIRHRNLVKIISACSND--DFKALIME 802 (1007)
Q Consensus 728 ~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lv~E 802 (1007)
|+..+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|++++++++|||++++++++... +..++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 567789999999999999876 48999999998653 33446788999999999999999999999887 78999999
Q ss_pred ecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCcc
Q 001838 803 YMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQL 870 (1007)
Q Consensus 803 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~~ 870 (1007)
|+++ +|.+++......+++..+..++.|+++|++||| ..+++|+++ .|++|||+++.......
T Consensus 81 ~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH---~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~- 155 (287)
T cd07840 81 YMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLH---SNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS- 155 (287)
T ss_pred cccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCc-
Confidence 9975 899988766556899999999999999999995 578999865 48999999987754321
Q ss_pred cccccccCCccccccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcC---ccH---HHH-h
Q 001838 871 SMQTQTLATIGYMAPEYGVQ-GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLP---ISV---MEV-I 942 (1007)
Q Consensus 871 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~---~~~---~~~-~ 942 (1007)
...+...++..|+|||.+.+ ..++.++|||||||++|||+||+.||+...... ........... ... .+. .
T Consensus 156 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
T cd07840 156 ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELE-QLEKIFELCGSPTDENWPGVSKLPW 234 (287)
T ss_pred ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCchhhccccccchh
Confidence 11233457889999997765 457999999999999999999999997532111 11111110000 000 000 0
Q ss_pred hhhhc--cc-hhhhHHHHHH-HHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 943 DTNLL--SG-EERYFAAKEQ-SLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 943 d~~~~--~~-~~~~~~~~~~-~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
..... .. .......... +..++.+++.+|++.+|++||++.|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 284 (287)
T cd07840 235 FENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284 (287)
T ss_pred hhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 00000 00 0000001111 25678999999999999999999999863
No 341
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.96 E-value=4.9e-29 Score=282.19 Aligned_cols=254 Identities=20% Similarity=0.209 Sum_probs=185.2
Q ss_pred hcccccccceecccCceEEEEEEEc-CCceEEEEEechh--hHHHHHHHHHHHHHHHhcCCCceeEEEEEEecC------
Q 001838 724 ATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQR--YERALKSFQDECEVMKRIRHRNLVKIISACSND------ 794 (1007)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------ 794 (1007)
..++|+..+.||+|+||+||+|+.. +|+.||||++... .....+.+.+|+.++++++||||++++++|...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 4578999999999999999999865 6899999998643 233445678899999999999999999998643
Q ss_pred CeeEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecce
Q 001838 795 DFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAK 862 (1007)
Q Consensus 795 ~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~ 862 (1007)
...|+||||+. |+|.+.+... ++...+..++.|++.||+|| |+.+|+|+|++ |++|||+++
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~~---l~~~~~~~~~~ql~~aL~~L---H~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~ 166 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQMD---LDHERMSYLLYQMLCGIKHL---HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 166 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhhc---CCHHHHHHHHHHHHHHHHHH---HhCCeeeCCCCHHHEEECCCCCEEEccCccce
Confidence 35799999996 5888887643 78888999999999999999 56799999763 899999998
Q ss_pred ecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhc--CccHHH
Q 001838 863 FLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLL--PISVME 940 (1007)
Q Consensus 863 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~--~~~~~~ 940 (1007)
....... .....|+..|+|||.+.+..++.++|||||||++|+|++|+.||...... ........... +....+
T Consensus 167 ~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~ 242 (353)
T cd07850 167 TAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHI-DQWNKIIEQLGTPSDEFMS 242 (353)
T ss_pred eCCCCCC---CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHhcCCCCHHHHH
Confidence 7643211 23346889999999999889999999999999999999999999743210 00111111110 111111
Q ss_pred Hhhhhhcc--------chhh-------------hHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 941 VIDTNLLS--------GEER-------------YFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 941 ~~d~~~~~--------~~~~-------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
.++..... .... ..........++.+++.+|++.||++|||+.|+++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 243 RLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred HhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 11110000 0000 000011224568899999999999999999999976
No 342
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.96 E-value=2.8e-29 Score=282.30 Aligned_cols=263 Identities=19% Similarity=0.240 Sum_probs=189.1
Q ss_pred cccccccceecccCceEEEEEEEc-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecC-----Ce
Q 001838 725 TDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY--ERALKSFQDECEVMKRIRHRNLVKIISACSND-----DF 796 (1007)
Q Consensus 725 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~ 796 (1007)
.++|...+.||+|+||+||+|+.. +|+.||||.++... ......+.+|+.++++++||||+++++++... ..
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 467999999999999999999865 68999999987532 23345677899999999999999999988654 34
Q ss_pred eEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceec
Q 001838 797 KALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFL 864 (1007)
Q Consensus 797 ~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~ 864 (1007)
.|+||||+. ++|.+++.... .+++..+..++.|++.||.|| |+.+++|++++ ||+|||+++..
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~L---H~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~ 158 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSSQ-TLSDDHCQYFLYQLLRGLKYI---HSANVLHRDLKPSNLLLNANCDLKICDFGLARTT 158 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHEEEcCCCCEEECcCcccccc
Confidence 799999996 68998887543 588999999999999999999 57789999663 89999999876
Q ss_pred CCCCcccccccccCCccccccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhc---C-----
Q 001838 865 NGQDQLSMQTQTLATIGYMAPEYGVQ-GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLL---P----- 935 (1007)
Q Consensus 865 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~---~----- 935 (1007)
..... ......++..|+|||++.. ..++.++|||||||++|||++|+.||....... .......... +
T Consensus 159 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~ 235 (337)
T cd07858 159 SEKGD--FMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVH-QLKLITELLGSPSEEDLGF 235 (337)
T ss_pred CCCcc--cccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHH-HHHHHHHHhCCCChHHhhh
Confidence 43221 1233467889999998765 468999999999999999999999997532110 0100110000 0
Q ss_pred ---ccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH--HHHHHHH
Q 001838 936 ---ISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG--LLKIRDT 995 (1007)
Q Consensus 936 ---~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~--L~~i~~~ 995 (1007)
....+.++..............+....++.+++.+|++.+|++|||+.|+++. +..+...
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~ 300 (337)
T cd07858 236 IRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDP 300 (337)
T ss_pred cCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcCc
Confidence 00011110000000000001112345678999999999999999999999988 6555443
No 343
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.96 E-value=7e-29 Score=268.49 Aligned_cols=231 Identities=22% Similarity=0.265 Sum_probs=173.6
Q ss_pred ceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHH-HhcCCCceeEEEEEEecCCeeEEEEEecCC
Q 001838 732 NLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVM-KRIRHRNLVKIISACSNDDFKALIMEYMPN 806 (1007)
Q Consensus 732 ~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l-~~l~H~niv~l~~~~~~~~~~~lv~E~~~~ 806 (1007)
+.||+|+||.||+|... +|+.||||++.... ......+..|..++ ...+||||+++++++..++..|+||||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 46899999999999875 58999999986542 12223445555554 445899999999999999999999999999
Q ss_pred CChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCcccccc
Q 001838 807 GSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLSMQT 874 (1007)
Q Consensus 807 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~~~~~~ 874 (1007)
|+|.+++.... .+++..+.+++.|++.||.|| |+.+++|+++ +|++|||+++.... ..
T Consensus 82 ~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~l---H~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~------~~ 151 (260)
T cd05611 82 GDCASLIKTLG-GLPEDWAKQYIAEVVLGVEDL---HQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE------NK 151 (260)
T ss_pred CCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHeEECCCCcEEEeecccceeccc------cc
Confidence 99999997643 478889999999999999999 5678999965 37999999986532 12
Q ss_pred cccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhhH
Q 001838 875 QTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYF 954 (1007)
Q Consensus 875 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 954 (1007)
...|++.|+|||...+..++.++|||||||++|||++|..||....... .... +........ .
T Consensus 152 ~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-----~~~~---------~~~~~~~~~---~ 214 (260)
T cd05611 152 KFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDA-----VFDN---------ILSRRINWP---E 214 (260)
T ss_pred cCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHH-----HHHH---------HHhcccCCC---C
Confidence 3458889999999888889999999999999999999999997532111 1100 000000000 0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 001838 955 AAKEQSLLSILNLATECTIESPGKRINAREIVTGL 989 (1007)
Q Consensus 955 ~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L 989 (1007)
........++.+++.+||+.+|++||++.++.+.|
T Consensus 215 ~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l 249 (260)
T cd05611 215 EVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIK 249 (260)
T ss_pred cccccCCHHHHHHHHHHccCCHHHccCCCcHHHHH
Confidence 00112345789999999999999999876555443
No 344
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.96 E-value=7.9e-29 Score=274.97 Aligned_cols=236 Identities=25% Similarity=0.313 Sum_probs=182.6
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechh---hHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQR---YERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIM 801 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 801 (1007)
+.|+..+.||+|+||.||+|+.. ++..||+|.+... .....+++.+|++++++++|+|++++++++...+..++||
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 34777788999999999999975 5888999998632 2344567889999999999999999999999999999999
Q ss_pred EecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCc
Q 001838 802 EYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQ 869 (1007)
Q Consensus 802 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~ 869 (1007)
||+. |++.+.+......+++..+..++.|++.|+.|| |+.+++|+++ .|++|||++......
T Consensus 95 e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~L---H~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~-- 168 (308)
T cd06634 95 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYL---HSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-- 168 (308)
T ss_pred EccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCHHhEEECCCCcEEECCcccceeecCc--
Confidence 9996 688887765555688999999999999999999 5678999965 489999999876432
Q ss_pred ccccccccCCcccccccccc---cCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhh
Q 001838 870 LSMQTQTLATIGYMAPEYGV---QGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNL 946 (1007)
Q Consensus 870 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~ 946 (1007)
....|++.|+|||++. ...++.++|||||||++|||++|+.||...... .....+.....+. .
T Consensus 169 ----~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-~~~~~~~~~~~~~---------~ 234 (308)
T cd06634 169 ----NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-SALYHIAQNESPA---------L 234 (308)
T ss_pred ----ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHH-HHHHHHhhcCCCC---------c
Confidence 2346888999999874 356888999999999999999999998642110 0011111100000 0
Q ss_pred ccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 001838 947 LSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLL 990 (1007)
Q Consensus 947 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~ 990 (1007)
........+.+++.+||+.+|++||++.|+++...
T Consensus 235 ---------~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~ 269 (308)
T cd06634 235 ---------QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 269 (308)
T ss_pred ---------CcccccHHHHHHHHHHhhCCcccCCCHHHHhhCcc
Confidence 01122346889999999999999999999987643
No 345
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.2e-29 Score=266.87 Aligned_cols=236 Identities=22% Similarity=0.318 Sum_probs=191.6
Q ss_pred cccccccceecccCceEEEEEEEc-CCceEEEEEechhhH---HHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEE
Q 001838 725 TDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYE---RALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALI 800 (1007)
Q Consensus 725 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 800 (1007)
.+.|+.-++||+||||.||-++.+ +|+.+|.|.+.+..- +...-..+|-.++.+++.+.||.+-.+|++.+..++|
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClV 263 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLV 263 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEE
Confidence 345777899999999999999866 699999999876542 2234568899999999999999999999999999999
Q ss_pred EEecCCCChhHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCC
Q 001838 801 MEYMPNGSLENRLYSGT-CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQ 867 (1007)
Q Consensus 801 ~E~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~ 867 (1007)
+..|.||+|.-+|...+ ..+++.++.-+|.+|+.||++| |+.+||.||++ +|+|.|+|..+...
T Consensus 264 LtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehl---H~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g 340 (591)
T KOG0986|consen 264 LTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHL---HRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEG 340 (591)
T ss_pred EEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHH---HhcceeeccCChhheeeccCCCeEeeccceEEecCCC
Confidence 99999999999997643 4689999999999999999999 78899999875 89999999988755
Q ss_pred CcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhc
Q 001838 868 DQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLL 947 (1007)
Q Consensus 868 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~ 947 (1007)
... ++.+||.+|||||++....|+...|+||+||++|||+.|+.||...... .-.+.+|....
T Consensus 341 ~~~---~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeK--------------vk~eEvdrr~~ 403 (591)
T KOG0986|consen 341 KPI---RGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEK--------------VKREEVDRRTL 403 (591)
T ss_pred Ccc---ccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhh--------------hhHHHHHHHHh
Confidence 433 4558999999999999999999999999999999999999999742111 11223444333
Q ss_pred cchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 001838 948 SGEERYFAAKEQSLLSILNLATECTIESPGKRINAR 983 (1007)
Q Consensus 948 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~ 983 (1007)
...... ++..++++.++.+..|+.||++|.-.+
T Consensus 404 ~~~~ey---~~kFS~eakslc~~LL~Kdp~~RLGcr 436 (591)
T KOG0986|consen 404 EDPEEY---SDKFSEEAKSLCEGLLTKDPEKRLGCR 436 (591)
T ss_pred cchhhc---ccccCHHHHHHHHHHHccCHHHhccCC
Confidence 322221 233456788889999999999998554
No 346
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=4.4e-30 Score=258.63 Aligned_cols=237 Identities=22% Similarity=0.274 Sum_probs=188.0
Q ss_pred cccccccceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEE
Q 001838 725 TDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALI 800 (1007)
Q Consensus 725 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 800 (1007)
.++|+..+++|+|.||+|-.++-+ +|+.+|+|++++.. ......-..|-++|+..+||.+..+-..|...++.|+|
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV 246 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV 246 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence 567888999999999999999855 69999999998753 33445667899999999999999999999999999999
Q ss_pred EEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCC
Q 001838 801 MEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQD 868 (1007)
Q Consensus 801 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~ 868 (1007)
|||+.||.|+-+|.+.. .++..+..-+-..|+.||.|| |+.+||.||++ ||+|||+++.--.
T Consensus 247 MeyanGGeLf~HLsrer-~FsE~RtRFYGaEIvsAL~YL---Hs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~-- 320 (516)
T KOG0690|consen 247 MEYANGGELFFHLSRER-VFSEDRTRFYGAEIVSALGYL---HSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIK-- 320 (516)
T ss_pred EEEccCceEeeehhhhh-cccchhhhhhhHHHHHHhhhh---hhCCeeeeechhhhheeccCCceEeeecccchhccc--
Confidence 99999999999997755 466766777999999999999 67899999875 8999999986422
Q ss_pred cccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhcc
Q 001838 869 QLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLS 948 (1007)
Q Consensus 869 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~ 948 (1007)
........+|||.|+|||++....|+..+|+|.+|||+|||++|+.||.....+ .+.+.+-..
T Consensus 321 ~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~--------------kLFeLIl~e--- 383 (516)
T KOG0690|consen 321 YGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHE--------------KLFELILME--- 383 (516)
T ss_pred ccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchh--------------HHHHHHHhh---
Confidence 123346789999999999999999999999999999999999999999753211 111111100
Q ss_pred chhhhHHHHHHHHHHHHHHHhhcCCCCCCCCC-----CHHHHHHH
Q 001838 949 GEERYFAAKEQSLLSILNLATECTIESPGKRI-----NAREIVTG 988 (1007)
Q Consensus 949 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~evl~~ 988 (1007)
.- ..+.....+...|+...+..||.+|. .++||.++
T Consensus 384 -d~---kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h 424 (516)
T KOG0690|consen 384 -DL---KFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRH 424 (516)
T ss_pred -hc---cCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhh
Confidence 00 01122244677888899999999997 36666554
No 347
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.96 E-value=5.7e-29 Score=271.86 Aligned_cols=231 Identities=22% Similarity=0.274 Sum_probs=177.2
Q ss_pred ecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecCCCCh
Q 001838 734 LGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSL 809 (1007)
Q Consensus 734 ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~gsL 809 (1007)
||+|+||+||+|... +|+.||+|.+.... ....+.+.+|++++++++||||+++++++...+..|+||||+++|+|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 689999999999865 58999999987542 22345677899999999999999999999999999999999999999
Q ss_pred hHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCcccccccc
Q 001838 810 ENRLYSGT-CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLSMQTQT 876 (1007)
Q Consensus 810 ~~~l~~~~-~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~~~~~~~~ 876 (1007)
.+++.+.. ..+++..+..++.|++.|+.|| |+.+++|+++ .|++|||.+....... .....
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~l---H~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~---~~~~~ 154 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHL---HQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK---KIKGR 154 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCC---ccccc
Confidence 99997643 3588999999999999999999 5778999975 3899999998664321 11234
Q ss_pred cCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhhHHH
Q 001838 877 LATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYFAA 956 (1007)
Q Consensus 877 ~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 956 (1007)
.++..|+|||++.+..++.++|||||||++|||++|+.||....... ........ ..... ...
T Consensus 155 ~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~-------------~~~~~---~~~ 217 (277)
T cd05577 155 AGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKV-EKEELKRR-------------TLEMA---VEY 217 (277)
T ss_pred cCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccc-cHHHHHhc-------------ccccc---ccC
Confidence 67889999999888889999999999999999999999997532210 00000000 00000 000
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCC-----CHHHHHH
Q 001838 957 KEQSLLSILNLATECTIESPGKRI-----NAREIVT 987 (1007)
Q Consensus 957 ~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~evl~ 987 (1007)
+.....++.+++.+||+.+|++|| ++.++++
T Consensus 218 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 218 PDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred CccCCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence 111244688999999999999999 5555554
No 348
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.96 E-value=4.2e-29 Score=276.69 Aligned_cols=259 Identities=24% Similarity=0.289 Sum_probs=186.1
Q ss_pred HhcccccccceecccCceEEEEEEEc-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCC----
Q 001838 723 QATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY--ERALKSFQDECEVMKRIRHRNLVKIISACSNDD---- 795 (1007)
Q Consensus 723 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~---- 795 (1007)
.+.++|+..+.||+|+||.||+|..+ +|+.||||+++... ......+.+|++++++++||||+++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 35678999999999999999999976 58999999997542 222356778999999999999999999987654
Q ss_pred ------eeEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccce
Q 001838 796 ------FKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISD 857 (1007)
Q Consensus 796 ------~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~D 857 (1007)
..++|+||+++ ++.+.+......+++..+..++.|++.||+|| |+.+|+|+++ +||+|
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~i~H~dl~p~nili~~~~~~kl~d 159 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYC---HKKNFLHRDIKCSNILLNNKGQIKLAD 159 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEECCCCcEEeCc
Confidence 78999999986 77777776555689999999999999999999 5679999865 48999
Q ss_pred eecceecCCCCcccccccccCCccccccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhc--
Q 001838 858 FSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQ-GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLL-- 934 (1007)
Q Consensus 858 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~-- 934 (1007)
||+++....... .......++..|+|||.+.. ..++.++|||||||++|||++|+.||..... ...+........
T Consensus 160 fg~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~-~~~~~~~~~~~~~~ 237 (302)
T cd07864 160 FGLARLYNSEES-RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQE-LAQLELISRLCGSP 237 (302)
T ss_pred ccccccccCCcc-cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCC
Confidence 999987653322 11122346788999998765 3578999999999999999999999975321 111111111110
Q ss_pred -CccHHHHh--------hhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 935 -PISVMEVI--------DTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 935 -~~~~~~~~--------d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
+....+.. +...... ..........+.++.+++.+||+.+|++|||+.|+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 238 CPAVWPDVIKLPYFNTMKPKKQYR-RRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred Chhhcccccccccccccccccccc-cchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00000000 0000000 00000111124578999999999999999999999863
No 349
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.96 E-value=1.2e-28 Score=277.65 Aligned_cols=256 Identities=21% Similarity=0.264 Sum_probs=185.2
Q ss_pred HHHhcccccccceecccCceEEEEEEEc-CCceEEEEEechh--hHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCC--
Q 001838 721 LLQATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQR--YERALKSFQDECEVMKRIRHRNLVKIISACSNDD-- 795 (1007)
Q Consensus 721 ~~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-- 795 (1007)
+....++|+..+.||+|+||.||+|... +|..||||++... .....+.+.+|++++++++||||+++++++....
T Consensus 10 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 89 (343)
T cd07880 10 IWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSL 89 (343)
T ss_pred hhccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccc
Confidence 3345678999999999999999999854 6899999998643 2334457889999999999999999999987653
Q ss_pred ----eeEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceee
Q 001838 796 ----FKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFS 859 (1007)
Q Consensus 796 ----~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFG 859 (1007)
..++||||+ +++|.+++... .+++..+..++.|+++|++|| |+.+|+|++++ |++|||
T Consensus 90 ~~~~~~~lv~e~~-~~~l~~~~~~~--~l~~~~~~~i~~qi~~al~~L---H~~gi~H~dlkp~Nill~~~~~~kl~dfg 163 (343)
T cd07880 90 DRFHDFYLVMPFM-GTDLGKLMKHE--KLSEDRIQFLVYQMLKGLKYI---HAAGIIHRDLKPGNLAVNEDCELKILDFG 163 (343)
T ss_pred cccceEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEcCCCCEEEeecc
Confidence 358999999 77999888653 488999999999999999999 57889999763 899999
Q ss_pred cceecCCCCcccccccccCCccccccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHH----------
Q 001838 860 IAKFLNGQDQLSMQTQTLATIGYMAPEYGVQ-GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSR---------- 928 (1007)
Q Consensus 860 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~---------- 928 (1007)
+++..... .....+++.|+|||++.. ..++.++||||+||++|++++|+.||....... ....
T Consensus 164 ~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~ 237 (343)
T cd07880 164 LARQTDSE-----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLD-QLMEIMKVTGTPSK 237 (343)
T ss_pred cccccccC-----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCH
Confidence 99865422 123457889999998876 458899999999999999999999997532111 0111
Q ss_pred -HHHhhcCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 929 -WVNDLLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 929 -~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
|............+...............+....++.+++.+|++.||++|||+.+++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~ 298 (343)
T cd07880 238 EFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAH 298 (343)
T ss_pred HHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 111111000001000000000000001112234468899999999999999999999954
No 350
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.9e-30 Score=270.64 Aligned_cols=245 Identities=26% Similarity=0.403 Sum_probs=188.8
Q ss_pred ccccccceecccCceEEEEEEE-cCCceEEEEEechh-------hHHHHHHHHHHHHHHHhcCCCceeEEEEEEe-cCCe
Q 001838 726 DRFSKNNLLGIGSFGSVYVARL-QDGMEVAVKVFHQR-------YERALKSFQDECEVMKRIRHRNLVKIISACS-NDDF 796 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~~~~~-------~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~-~~~~ 796 (1007)
++|-..+.+|+|||++||+|.+ ...+.||||+-... .+...+...+|.+|.+.+.||.||++|+||. +.+.
T Consensus 463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtds 542 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDS 542 (775)
T ss_pred HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecccc
Confidence 5677789999999999999984 45889999986421 1223456789999999999999999999997 4567
Q ss_pred eEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc---------------ccceeecc
Q 001838 797 KALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA---------------HISDFSIA 861 (1007)
Q Consensus 797 ~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~---------------kl~DFGla 861 (1007)
+|-|+|||+|.+|+-||+.+. .+++.++..|+.||+.||.||.+ -+++|||.|++ ||+|||++
T Consensus 543 FCTVLEYceGNDLDFYLKQhk-lmSEKEARSIiMQiVnAL~YLNE-ikpPIIHYDLKPgNILLv~GtacGeIKITDFGLS 620 (775)
T KOG1151|consen 543 FCTVLEYCEGNDLDFYLKQHK-LMSEKEARSIIMQIVNALKYLNE-IKPPIIHYDLKPGNILLVNGTACGEIKITDFGLS 620 (775)
T ss_pred ceeeeeecCCCchhHHHHhhh-hhhHHHHHHHHHHHHHHHHHHhc-cCCCeeeeccCCccEEEecCcccceeEeeecchh
Confidence 899999999999999998765 47888899999999999999965 57899998664 89999999
Q ss_pred eecCCCCcc-----cccccccCCcccccccccccC----CCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHh
Q 001838 862 KFLNGQDQL-----SMQTQTLATIGYMAPEYGVQG----RVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVND 932 (1007)
Q Consensus 862 ~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~----~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~ 932 (1007)
+.+.++... ..++...||.+|++||.+.-+ +.+.|+||||.|||+|..+.|+.||.......
T Consensus 621 KIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQ--------- 691 (775)
T KOG1151|consen 621 KIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQ--------- 691 (775)
T ss_pred hhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHH---------
Confidence 998755332 233567899999999976543 47899999999999999999999997532111
Q ss_pred hcCccHHHHhh-hhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 933 LLPISVMEVID-TNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 933 ~~~~~~~~~~d-~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
+++. ..+....+..++..+....+..+++++|+++.-++|....+++..
T Consensus 692 -------dILqeNTIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~d 741 (775)
T KOG1151|consen 692 -------DILQENTILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACD 741 (775)
T ss_pred -------HHHhhhchhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccC
Confidence 1111 111111122222233445678899999999999999988877654
No 351
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.96 E-value=6.9e-29 Score=276.57 Aligned_cols=252 Identities=19% Similarity=0.222 Sum_probs=179.1
Q ss_pred cceecccCceEEEEEEEcCCceEEEEEechh--hHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecCCCC
Q 001838 731 NNLLGIGSFGSVYVARLQDGMEVAVKVFHQR--YERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGS 808 (1007)
Q Consensus 731 ~~~ig~G~~g~Vy~~~~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~gs 808 (1007)
.+.+|.|+++.||++.. +|+.||||++... .....+.+.+|++++++++||||+++++++.+.+..+++|||+++|+
T Consensus 7 ~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~ 85 (314)
T cd08216 7 GKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGS 85 (314)
T ss_pred hHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCC
Confidence 34445555555555554 6899999998754 34455789999999999999999999999999999999999999999
Q ss_pred hhHhhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcc-----
Q 001838 809 LENRLYSG-TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQL----- 870 (1007)
Q Consensus 809 L~~~l~~~-~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~----- 870 (1007)
|.+++... ...+++.....++.|++.||+|| |+.+|+|+|++ |++|||.+.........
T Consensus 86 l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~L---H~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~ 162 (314)
T cd08216 86 CEDLLKTHFPEGLPELAIAFILKDVLNALDYI---HSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVH 162 (314)
T ss_pred HHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCcceEEEecCCceEEecCccceeeccccccccccc
Confidence 99999754 34578888999999999999999 56789999764 89999998765432211
Q ss_pred cccccccCCccccccccccc--CCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCc------------
Q 001838 871 SMQTQTLATIGYMAPEYGVQ--GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPI------------ 936 (1007)
Q Consensus 871 ~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~------------ 936 (1007)
.......++..|+|||++.. ..++.++|||||||++|||++|+.||............ .....+.
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 241 (314)
T cd08216 163 DFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEK-VRGTVPCLLDKSTYPLYED 241 (314)
T ss_pred cccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-HhccCccccccCchhhhcC
Confidence 11123457788999999866 35889999999999999999999999754222111111 1100000
Q ss_pred cHHH----HhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 001838 937 SVME----VIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGL 989 (1007)
Q Consensus 937 ~~~~----~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L 989 (1007)
...+ ..+... ..............++.+++.+||+.||++|||+.|++++-
T Consensus 242 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p 296 (314)
T cd08216 242 SMSQSRSSNEHPNN--RDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHS 296 (314)
T ss_pred CcCcccccccccch--hhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCc
Confidence 0000 000000 00001111222345788999999999999999999999863
No 352
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.96 E-value=5.5e-29 Score=268.54 Aligned_cols=235 Identities=23% Similarity=0.307 Sum_probs=187.7
Q ss_pred cccccceecccCceEEEEEEEc-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEe
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY--ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEY 803 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~ 803 (1007)
+|+..+.||+|+||.||++... +++.+|+|++.... ......+.+|++++++++||||+++++++.+....++||||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 4778899999999999999755 68899999987542 34456788999999999999999999999999999999999
Q ss_pred cCCCChhHhhhcC---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCC
Q 001838 804 MPNGSLENRLYSG---TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQD 868 (1007)
Q Consensus 804 ~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~ 868 (1007)
+++++|.+++.+. ...+++..+..++.|++.|++|| |+.+++|+++ .|++|||+++.....
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~l---h~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~- 156 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQAL---HEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN- 156 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH---hhCCcccCCCCcceEEEecCCcEEEeeccchhhhccC-
Confidence 9999999998652 24578899999999999999999 6788999865 389999999877543
Q ss_pred cccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhcc
Q 001838 869 QLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLS 948 (1007)
Q Consensus 869 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~ 948 (1007)
......|+..|+|||...+..++.++||||+|+++|||++|+.||...... .+... +.....
T Consensus 157 ---~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~--~~~~~------------~~~~~~- 218 (256)
T cd08530 157 ---MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ--DLRYK------------VQRGKY- 218 (256)
T ss_pred ---CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHH------------HhcCCC-
Confidence 112345888999999998888999999999999999999999999753211 11111 000000
Q ss_pred chhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 949 GEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 949 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
.+.+.....++.+++.+|++.+|++|||+.|+++.
T Consensus 219 -----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 219 -----PPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred -----CCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00111334578999999999999999999999864
No 353
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.96 E-value=7.4e-29 Score=279.32 Aligned_cols=257 Identities=21% Similarity=0.282 Sum_probs=183.3
Q ss_pred cccccccceecccCceEEEEEEEc-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCC------
Q 001838 725 TDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY--ERALKSFQDECEVMKRIRHRNLVKIISACSNDD------ 795 (1007)
Q Consensus 725 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------ 795 (1007)
.++|...+.||+|+||.||+|... +|+.||||++.... ......+.+|+.++++++||||+++++++....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 378999999999999999999865 68999999986432 223456889999999999999999999987543
Q ss_pred eeEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeeccee
Q 001838 796 FKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKF 863 (1007)
Q Consensus 796 ~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~ 863 (1007)
..++|+||+.. ++.++.. ..+++..+..++.|++.||+|| |+.+|+||++ +|++|||+++.
T Consensus 94 ~~~lv~e~~~~-~l~~~~~---~~~~~~~~~~~~~qi~~aL~~L---H~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~ 166 (342)
T cd07879 94 DFYLVMPYMQT-DLQKIMG---HPLSEDKVQYLVYQMLCGLKYI---HSAGIIHRDLKPGNLAVNEDCELKILDFGLARH 166 (342)
T ss_pred eEEEEeccccc-CHHHHHc---CCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEECCCCCEEEeeCCCCcC
Confidence 46999999974 7776653 2478889999999999999999 5678999976 48999999986
Q ss_pred cCCCCcccccccccCCccccccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHh--hcCccHHH
Q 001838 864 LNGQDQLSMQTQTLATIGYMAPEYGVQ-GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVND--LLPISVME 940 (1007)
Q Consensus 864 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~--~~~~~~~~ 940 (1007)
.... .....++..|+|||++.+ ..++.++|||||||++|||++|+.||....... .+...... .......+
T Consensus 167 ~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~ 240 (342)
T cd07879 167 ADAE-----MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVTGVPGPEFVQ 240 (342)
T ss_pred CCCC-----CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHH
Confidence 5321 123467889999998876 458999999999999999999999997532111 11111110 00011111
Q ss_pred Hhhhhh---------ccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH--HHHHHH
Q 001838 941 VIDTNL---------LSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG--LLKIRD 994 (1007)
Q Consensus 941 ~~d~~~---------~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~--L~~i~~ 994 (1007)
..+... ...........+....++.+++.+||+.||++||++.|++.+ ++.+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~ 305 (342)
T cd07879 241 KLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD 305 (342)
T ss_pred HhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence 111000 000000000011223468899999999999999999999965 555543
No 354
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.96 E-value=1.2e-28 Score=277.95 Aligned_cols=261 Identities=21% Similarity=0.266 Sum_probs=187.9
Q ss_pred ccHHHHHHhcccccccceecccCceEEEEEEEc-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeEEEEEEe
Q 001838 716 FSYHELLQATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY--ERALKSFQDECEVMKRIRHRNLVKIISACS 792 (1007)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~ 792 (1007)
....++..++++|...+.||+|+||.||+|... +|+.||||+++... ....+.+.+|++++++++||||+++++++.
T Consensus 7 ~~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~ 86 (345)
T cd07877 7 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT 86 (345)
T ss_pred hHHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeee
Confidence 334567778899999999999999999999854 68999999997532 233466888999999999999999999886
Q ss_pred cC------CeeEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------c
Q 001838 793 ND------DFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------H 854 (1007)
Q Consensus 793 ~~------~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------k 854 (1007)
.. ...|+|+|++ +++|.+++..+ .+++..+..++.|+++|++|| |+.+|+|++++ |
T Consensus 87 ~~~~~~~~~~~~lv~~~~-~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~L---H~~~ivH~dlkp~NIll~~~~~~k 160 (345)
T cd07877 87 PARSLEEFNDVYLVTHLM-GADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELK 160 (345)
T ss_pred ecccccccccEEEEehhc-ccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHH---HHCCeeecCCChHHEEEcCCCCEE
Confidence 43 3468888887 78998888654 388999999999999999999 56789999663 8
Q ss_pred cceeecceecCCCCcccccccccCCccccccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhh
Q 001838 855 ISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQ-GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDL 933 (1007)
Q Consensus 855 l~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~ 933 (1007)
|+|||+++..... .....|+..|+|||++.. ..++.++|||||||++|||++|+.||....... .+.......
T Consensus 161 l~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~ 234 (345)
T cd07877 161 ILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID-QLKLILRLV 234 (345)
T ss_pred Eeccccccccccc-----ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHh
Confidence 9999999865321 123468899999998766 468899999999999999999999996432111 111111100
Q ss_pred --cCccHHHHhhh--------hhccchh-hhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 934 --LPISVMEVIDT--------NLLSGEE-RYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 934 --~~~~~~~~~d~--------~~~~~~~-~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
.+......+.. .+..... ...........++.+++.+|++.||++||++.|++.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 235 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred CCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 01111100000 0000000 0000000123468899999999999999999999876
No 355
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.96 E-value=1.5e-28 Score=275.42 Aligned_cols=259 Identities=22% Similarity=0.320 Sum_probs=181.2
Q ss_pred ceeccc--CceEEEEEEEc-CCceEEEEEechh--hHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecCC
Q 001838 732 NLLGIG--SFGSVYVARLQ-DGMEVAVKVFHQR--YERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPN 806 (1007)
Q Consensus 732 ~~ig~G--~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~ 806 (1007)
..||+| +||+||+|+.. +|+.||||++... ..+..+.+.+|+.+++.++||||++++++|..++..++||||+.+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 346666 99999999875 6999999998743 234457889999999999999999999999999999999999999
Q ss_pred CChhHhhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcc---
Q 001838 807 GSLENRLYSG-TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQL--- 870 (1007)
Q Consensus 807 gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~--- 870 (1007)
|++.+++.+. ...+++..+..++.|++.||+|| |+.+|+|||++ |++|||.+.........
T Consensus 84 ~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~l---H~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (328)
T cd08226 84 GSANSLLKTYFPEGMSEALIGNILFGALRGLNYL---HQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKV 160 (328)
T ss_pred CCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccc
Confidence 9999998754 23588889999999999999999 57899999875 67888755332211100
Q ss_pred --cccccccCCcccccccccccC--CCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhh---------cCcc
Q 001838 871 --SMQTQTLATIGYMAPEYGVQG--RVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDL---------LPIS 937 (1007)
Q Consensus 871 --~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~---------~~~~ 937 (1007)
.......++..|+|||++.+. .++.++|||||||++|||++|+.||........ ........ .+..
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 239 (328)
T cd08226 161 VYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQM-LLQKLKGPPYSPLDITTFPCE 239 (328)
T ss_pred cccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHH-HHHHhcCCCCCCccccccchh
Confidence 001112356679999998763 478999999999999999999999975422111 11110000 0000
Q ss_pred HHHH----------hhhhh--------ccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH--HHHHHH
Q 001838 938 VMEV----------IDTNL--------LSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG--LLKIRD 994 (1007)
Q Consensus 938 ~~~~----------~d~~~--------~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~--L~~i~~ 994 (1007)
.... ++... ........+.......++.+++.+||+.||++|||+.|+++. +..+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~~ 316 (328)
T cd08226 240 ESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVKE 316 (328)
T ss_pred hhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHHH
Confidence 0000 00000 000001111223445679999999999999999999999865 344444
No 356
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.96 E-value=1.1e-29 Score=250.58 Aligned_cols=236 Identities=22% Similarity=0.243 Sum_probs=185.0
Q ss_pred ccceecccCceEEEEEEEc-CCceEEEEEechhh-HHHHHHHHHHHHHHHhcC-CCceeEEEEEEecCCeeEEEEEecCC
Q 001838 730 KNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY-ERALKSFQDECEVMKRIR-HRNLVKIISACSNDDFKALIMEYMPN 806 (1007)
Q Consensus 730 ~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~E~~~~ 806 (1007)
....+|+|+.|+|++++.+ +|..+|||.+.... .+..+++...++++.+-+ .|.||+.+|||......++.||.|..
T Consensus 96 ~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs~ 175 (391)
T KOG0983|consen 96 NLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMST 175 (391)
T ss_pred hHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHHH
Confidence 3567999999999999976 58999999997653 455678888898888776 89999999999999989999999954
Q ss_pred CChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcccccc
Q 001838 807 GSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQT 874 (1007)
Q Consensus 807 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~~~ 874 (1007)
.++.++++-...+++...=++...++.||.||. ..++|+|||++ |+||||++..+.+... .+
T Consensus 176 -C~ekLlkrik~piPE~ilGk~tva~v~AL~YLK--eKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkA---ht 249 (391)
T KOG0983|consen 176 -CAEKLLKRIKGPIPERILGKMTVAIVKALYYLK--EKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKA---HT 249 (391)
T ss_pred -HHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHH--HhcceeecccCccceEEccCCCEEeecccccceeecccc---cc
Confidence 567777766666888878888999999999997 45589999875 9999999988764432 24
Q ss_pred cccCCccccccccccc---CCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchh
Q 001838 875 QTLATIGYMAPEYGVQ---GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEE 951 (1007)
Q Consensus 875 ~~~gt~~y~aPE~~~~---~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~ 951 (1007)
...|.+.|||||.+.- .+|+.++|||||||.++||+||+.||.....+-..+.+...... +.+..
T Consensus 250 rsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~eP---------P~L~~--- 317 (391)
T KOG0983|consen 250 RSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEP---------PLLPG--- 317 (391)
T ss_pred cccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCC---------CCCCc---
Confidence 5679999999998864 46999999999999999999999999875433322222222111 11110
Q ss_pred hhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 952 RYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 952 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
....+..+.+++..||+.|+.+||.-.+++++
T Consensus 318 -----~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 318 -----HMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred -----ccCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 11124578999999999999999999988875
No 357
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.96 E-value=1.3e-28 Score=265.69 Aligned_cols=237 Identities=24% Similarity=0.383 Sum_probs=189.1
Q ss_pred cccccceecccCceEEEEEEEc-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEe
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY--ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEY 803 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~ 803 (1007)
+|+..+.||+|+||.||++... ++..||+|++.... ....+.+.+|++++++++|||++++++.+...+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 4778899999999999999976 58999999997543 34557789999999999999999999999999999999999
Q ss_pred cCCCChhHhhhcC---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCC
Q 001838 804 MPNGSLENRLYSG---TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQD 868 (1007)
Q Consensus 804 ~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~ 868 (1007)
+++++|.+++.+. ...+++..+..++.+++.|+.|| |+.+++|+++ .+++|||.+.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~l---h~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYL---HSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHH---HhCCEecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 9999999999764 35689999999999999999999 5669999865 3899999998764432
Q ss_pred cccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhcc
Q 001838 869 QLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLS 948 (1007)
Q Consensus 869 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~ 948 (1007)
. ......|++.|+|||......++.++||||+|+++|+|++|+.||+.... .+...... .....
T Consensus 158 ~--~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~-----~~~~~~~~--------~~~~~- 221 (258)
T cd08215 158 D--LAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENL-----LELALKIL--------KGQYP- 221 (258)
T ss_pred c--eecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcH-----HHHHHHHh--------cCCCC-
Confidence 1 12334688899999998888899999999999999999999999875321 11111100 00000
Q ss_pred chhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 949 GEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 949 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
. .+.....++.+++.+||..+|++|||+.|+++.
T Consensus 222 ~------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 222 P------IPSQYSSELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred C------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 001223468899999999999999999999864
No 358
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.96 E-value=2.3e-28 Score=264.78 Aligned_cols=230 Identities=25% Similarity=0.340 Sum_probs=180.1
Q ss_pred ecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecCCCCh
Q 001838 734 LGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSL 809 (1007)
Q Consensus 734 ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~gsL 809 (1007)
||.|+||.||+|+.. +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+++..++||||+++|+|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 699999999999976 48999999997542 23446789999999999999999999999999999999999999999
Q ss_pred hHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCccccccccc
Q 001838 810 ENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLSMQTQTL 877 (1007)
Q Consensus 810 ~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~~~~~~~~~ 877 (1007)
.+++.+.. .+++..+..++.|++.||+|| |+.+++|+++ +|++|||+++...... ......
T Consensus 81 ~~~l~~~~-~l~~~~~~~~~~~i~~~l~~l---H~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~---~~~~~~ 153 (262)
T cd05572 81 WTILRDRG-LFDEYTARFYIACVVLAFEYL---HNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ---KTWTFC 153 (262)
T ss_pred HHHHhhcC-CCCHHHHHHHHHHHHHHHHHH---hhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc---cccccc
Confidence 99997654 478889999999999999999 5789999865 4899999998775432 112346
Q ss_pred CCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhhHHHH
Q 001838 878 ATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYFAAK 957 (1007)
Q Consensus 878 gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 957 (1007)
|+..|+|||++....++.++|||||||++|||++|+.||.....+. .++... ..+... . ...+
T Consensus 154 ~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~~~~--------~~~~~~----~--~~~~ 216 (262)
T cd05572 154 GTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP---MEIYND--------ILKGNG----K--LEFP 216 (262)
T ss_pred CCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH---HHHHHH--------HhccCC----C--CCCC
Confidence 8889999999888889999999999999999999999997543211 111111 110000 0 0001
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCC-----HHHHHH
Q 001838 958 EQSLLSILNLATECTIESPGKRIN-----AREIVT 987 (1007)
Q Consensus 958 ~~~~~~~~~l~~~cl~~~p~~Rpt-----~~evl~ 987 (1007)
.....++.+++.+||+.+|++||+ ++|+++
T Consensus 217 ~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 217 NYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred cccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 112457899999999999999999 566655
No 359
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.96 E-value=8.3e-29 Score=291.25 Aligned_cols=260 Identities=17% Similarity=0.185 Sum_probs=176.8
Q ss_pred hcccccccceecccCceEEEEEEEcC--CceEEEEEe--------------ch---hhHHHHHHHHHHHHHHHhcCCCce
Q 001838 724 ATDRFSKNNLLGIGSFGSVYVARLQD--GMEVAVKVF--------------HQ---RYERALKSFQDECEVMKRIRHRNL 784 (1007)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~Vy~~~~~~--g~~vavK~~--------------~~---~~~~~~~~~~~E~~~l~~l~H~ni 784 (1007)
..++|...+.||+|+||+||+|..+. +..+++|.+ .+ ........+.+|+.++++++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 35689999999999999999987542 222332211 11 012234568899999999999999
Q ss_pred eEEEEEEecCCeeEEEEEecCCCChhHhhhcCC----CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc-------
Q 001838 785 VKIISACSNDDFKALIMEYMPNGSLENRLYSGT----CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------- 853 (1007)
Q Consensus 785 v~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~----~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------- 853 (1007)
|++++++.+.+..|+|+|++. +++.+++.... ......+..+++.|++.||+|| |+.+|||||++
T Consensus 226 v~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yL---H~~gIiHrDLKP~NILl~ 301 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYI---HDKKLIHRDIKLENIFLN 301 (501)
T ss_pred CcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEC
Confidence 999999999999999999995 57777775432 1223456778999999999999 57799999875
Q ss_pred -----ccceeecceecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCC-CCccccC-cchH
Q 001838 854 -----HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKP-TDEIFIG-ELSL 926 (1007)
Q Consensus 854 -----kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p-~~~~~~~-~~~l 926 (1007)
||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++|..+ +...... ...+
T Consensus 302 ~~~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~ 380 (501)
T PHA03210 302 CDGKIVLGDFGTAMPFEKEREA-FDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQL 380 (501)
T ss_pred CCCCEEEEeCCCceecCccccc-ccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHH
Confidence 89999999877533221 22345799999999999998999999999999999999998754 4322111 1112
Q ss_pred HHHHHhh------cCcc---HHHHhhhhhccch-hh--hHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 927 SRWVNDL------LPIS---VMEVIDTNLLSGE-ER--YFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 927 ~~~~~~~------~~~~---~~~~~d~~~~~~~-~~--~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
.+.+... .+.. ..+.++....... .. ..-.......++.+++.+|++.||++|||+.|++++
T Consensus 381 ~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h 454 (501)
T PHA03210 381 LKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL 454 (501)
T ss_pred HHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 2211111 1111 1111111100000 00 000000123457788999999999999999999875
No 360
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.96 E-value=5.9e-29 Score=280.09 Aligned_cols=256 Identities=22% Similarity=0.260 Sum_probs=182.9
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecC----------
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSND---------- 794 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~---------- 794 (1007)
.+|...+.||+|+||+||+|... +|+.||+|++........+.+.+|++++++++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 57899999999999999999875 5899999998765545557788999999999999999999876543
Q ss_pred ----CeeEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc-------------cccce
Q 001838 795 ----DFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV-------------AHISD 857 (1007)
Q Consensus 795 ----~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~-------------~kl~D 857 (1007)
...|+||||++ ++|.+++..+ .+++..+..++.||+.||+|| |+.+|+|+++ .|++|
T Consensus 85 ~~~~~~~~lv~e~~~-~~L~~~~~~~--~l~~~~~~~~~~qi~~aL~~L---H~~givH~dikp~Nili~~~~~~~kl~d 158 (342)
T cd07854 85 LTELNSVYIVQEYME-TDLANVLEQG--PLSEEHARLFMYQLLRGLKYI---HSANVLHRDLKPANVFINTEDLVLKIGD 158 (342)
T ss_pred ccccceEEEEeeccc-ccHHHHHHcC--CCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCHHHEEEcCCCceEEECC
Confidence 35789999997 5898888654 478899999999999999999 5678999865 38999
Q ss_pred eecceecCCCCccc-ccccccCCccccccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcC
Q 001838 858 FSIAKFLNGQDQLS-MQTQTLATIGYMAPEYGVQ-GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLP 935 (1007)
Q Consensus 858 FGla~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~ 935 (1007)
||.++......... ......|+..|+|||.+.. ..++.++|||||||++|||++|+.||......+ ...........
T Consensus 159 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~-~~~~~~~~~~~ 237 (342)
T cd07854 159 FGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELE-QMQLILESVPV 237 (342)
T ss_pred cccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCC
Confidence 99998764321111 1123357889999997654 458899999999999999999999997532211 01111111000
Q ss_pred c---cHHH---Hhhhhhc----cchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 936 I---SVME---VIDTNLL----SGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 936 ~---~~~~---~~d~~~~----~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
. ...+ .+..... ..........+....++.+++.+|++.||++|||+.|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 238 VREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred CChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 0 0000 0000000 00000000111234568899999999999999999999864
No 361
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.96 E-value=2.2e-28 Score=268.74 Aligned_cols=253 Identities=24% Similarity=0.271 Sum_probs=183.4
Q ss_pred ccccceecccCceEEEEEEEc-CCceEEEEEechhh--HHHHHHHHHHHHHHHhc---CCCceeEEEEEEecCCe-----
Q 001838 728 FSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY--ERALKSFQDECEVMKRI---RHRNLVKIISACSNDDF----- 796 (1007)
Q Consensus 728 ~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~H~niv~l~~~~~~~~~----- 796 (1007)
|+..+.||+|+||.||+|+.+ +++.||||+++... ......+.+|+++++++ +||||+++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 567789999999999999987 48999999997432 22234567788887776 59999999999988776
Q ss_pred eEEEEEecCCCChhHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeeccee
Q 001838 797 KALIMEYMPNGSLENRLYSGT-CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKF 863 (1007)
Q Consensus 797 ~~lv~E~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~ 863 (1007)
.+++|||+.+ +|.+++.... ..+++..+..++.|+++||.|| |+.+++|+++ +|++|||++..
T Consensus 81 ~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~L---H~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~ 156 (287)
T cd07838 81 LTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFL---HSHRIVHRDLKPQNILVTSDGQVKIADFGLARI 156 (287)
T ss_pred eEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeeccCChhhEEEccCCCEEEeccCccee
Confidence 9999999974 8998887643 3589999999999999999999 5678999865 48999999987
Q ss_pred cCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHh-
Q 001838 864 LNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVI- 942 (1007)
Q Consensus 864 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~- 942 (1007)
....... ....++..|+|||++....++.++|||||||++|||++|++||..... ...+.++.............
T Consensus 157 ~~~~~~~---~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 232 (287)
T cd07838 157 YSFEMAL---TSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSE-ADQLDKIFDVIGLPSEEEWPR 232 (287)
T ss_pred ccCCccc---ccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCCh-HHHHHHHHHHcCCCChHhcCC
Confidence 6433211 233578899999999888899999999999999999999999875322 11222222211100000000
Q ss_pred h----hh-hcc-chhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 943 D----TN-LLS-GEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 943 d----~~-~~~-~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
. .. ... ...............+.+++.+||+.||++||++.|+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~ 284 (287)
T cd07838 233 NVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH 284 (287)
T ss_pred CcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence 0 00 000 0000011112334678899999999999999999999853
No 362
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.96 E-value=2.8e-28 Score=271.06 Aligned_cols=232 Identities=24% Similarity=0.294 Sum_probs=179.6
Q ss_pred ccccceecccCceEEEEEEEc-CCceEEEEEechh---hHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEe
Q 001838 728 FSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQR---YERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEY 803 (1007)
Q Consensus 728 ~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~ 803 (1007)
|...+.||+|+||+||+|+.. +|+.||+|++... .....+.+.+|++++++++|||++++++++.+.+..|+||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 555678999999999999865 5889999998643 233446788999999999999999999999999999999999
Q ss_pred cCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCccc
Q 001838 804 MPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLS 871 (1007)
Q Consensus 804 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~~~ 871 (1007)
+. |++.+++......+++.++..++.|++.|+.|| |+.+++|+++ .|++|||++......
T Consensus 103 ~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~L---H~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~---- 174 (313)
T cd06633 103 CL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYL---HSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSPA---- 174 (313)
T ss_pred CC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCChhhEEECCCCCEEEeecCCCcccCCC----
Confidence 96 588888876555689999999999999999999 4678999865 389999998653221
Q ss_pred ccccccCCcccccccccc---cCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhcc
Q 001838 872 MQTQTLATIGYMAPEYGV---QGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLS 948 (1007)
Q Consensus 872 ~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~ 948 (1007)
....|+..|+|||++. ...++.++|||||||++|||++|+.||..... ............ +...
T Consensus 175 --~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~--~~~~~~~~~~~~--------~~~~- 241 (313)
T cd06633 175 --NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA--MSALYHIAQNDS--------PTLQ- 241 (313)
T ss_pred --CCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHhcCC--------CCCC-
Confidence 2346889999999874 35688999999999999999999999875321 111111100000 0000
Q ss_pred chhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 949 GEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 949 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
.......+.+++.+||+.+|.+||++.|++..
T Consensus 242 --------~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 242 --------SNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred --------ccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 01112357889999999999999999999975
No 363
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.96 E-value=8.4e-29 Score=277.93 Aligned_cols=262 Identities=21% Similarity=0.263 Sum_probs=193.2
Q ss_pred cccccceecccCceEEEEEEEc-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCC-----eeE
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY--ERALKSFQDECEVMKRIRHRNLVKIISACSNDD-----FKA 798 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-----~~~ 798 (1007)
+|...+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++...+ ..|
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 5788899999999999999976 48999999987643 344567899999999999999999999998775 789
Q ss_pred EEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCC
Q 001838 799 LIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNG 866 (1007)
Q Consensus 799 lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~ 866 (1007)
+||||++ ++|.+++.+.. .+++..+..++.|++.||+|| |+.+|+|++++ +++|||++.....
T Consensus 81 lv~e~~~-~~l~~~l~~~~-~l~~~~~~~i~~~l~~~l~~L---H~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~ 155 (330)
T cd07834 81 IVTELME-TDLHKVIKSPQ-PLTDDHIQYFLYQILRGLKYL---HSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDP 155 (330)
T ss_pred EEecchh-hhHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEcCCCCEEEcccCceEeecc
Confidence 9999998 48999887654 689999999999999999999 57789999763 8999999998754
Q ss_pred CCcc-cccccccCCcccccccccccC-CCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhc----------
Q 001838 867 QDQL-SMQTQTLATIGYMAPEYGVQG-RVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLL---------- 934 (1007)
Q Consensus 867 ~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~---------- 934 (1007)
.... .......++..|+|||++.+. .++.++|||||||++|+|++|+.||......+ ..+.+....
T Consensus 156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~--~~~~i~~~~~~~~~~~~~~ 233 (330)
T cd07834 156 DEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYID--QLNLIVEVLGTPSEEDLKF 233 (330)
T ss_pred cccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHH--HHHHHHHhcCCCChhHhhh
Confidence 3211 112345688999999999887 78999999999999999999999997543211 111111100
Q ss_pred --CccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH--HHHHHHH
Q 001838 935 --PISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG--LLKIRDT 995 (1007)
Q Consensus 935 --~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~--L~~i~~~ 995 (1007)
.....+.+...............+....++.+++.+||+.+|++|||+.+++++ ++.++..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~ 298 (330)
T cd07834 234 ITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDP 298 (330)
T ss_pred ccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhccc
Confidence 001111111000000000000111234578999999999999999999999986 5555543
No 364
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.96 E-value=4e-30 Score=258.00 Aligned_cols=191 Identities=22% Similarity=0.299 Sum_probs=155.4
Q ss_pred hcccccccceecccCceEEEEEEEc---C--CceEEEEEechhhH--HHHHHHHHHHHHHHhcCCCceeEEEEEEec-CC
Q 001838 724 ATDRFSKNNLLGIGSFGSVYVARLQ---D--GMEVAVKVFHQRYE--RALKSFQDECEVMKRIRHRNLVKIISACSN-DD 795 (1007)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~Vy~~~~~---~--g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~ 795 (1007)
....|+....||+|.||.||+|.-. + .+++|||+++...+ ..-....+|+.+++.++|||||.+..+|.. +.
T Consensus 22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~ 101 (438)
T KOG0666|consen 22 DLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDK 101 (438)
T ss_pred HHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCc
Confidence 3456889999999999999999532 2 34799999975531 223567899999999999999999999877 77
Q ss_pred eeEEEEEecCCCChhHhhhcC----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc----------------cc
Q 001838 796 FKALIMEYMPNGSLENRLYSG----TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA----------------HI 855 (1007)
Q Consensus 796 ~~~lv~E~~~~gsL~~~l~~~----~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~----------------kl 855 (1007)
..++++||++. +|.+.++-+ ...++...+..|+.||+.|+.|| |++=|+|||++ ||
T Consensus 102 ~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YL---H~NWvlHRDLKPaNIlvmgdgperG~VKI 177 (438)
T KOG0666|consen 102 KVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYL---HSNWVLHRDLKPANILVMGDGPERGRVKI 177 (438)
T ss_pred eEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHH---hhhheeeccCCcceEEEeccCCccCeeEe
Confidence 89999999987 899988643 24678888999999999999999 78889999763 99
Q ss_pred ceeecceecCCCCcc-cccccccCCcccccccccccCC-CCchhhHHHHHHHHHHHHhCCCCCCc
Q 001838 856 SDFSIAKFLNGQDQL-SMQTQTLATIGYMAPEYGVQGR-VSTRGDVYSYGIMLMETFTGKKPTDE 918 (1007)
Q Consensus 856 ~DFGla~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwS~Gvil~elltG~~p~~~ 918 (1007)
+|||+|+.....-.. .....++-|.+|+|||.+.+.+ |+.+.||||.|||+.||+|-++-|..
T Consensus 178 aDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g 242 (438)
T KOG0666|consen 178 ADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKG 242 (438)
T ss_pred ecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccc
Confidence 999999987643221 1224556799999999988865 89999999999999999997776653
No 365
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.96 E-value=3e-28 Score=262.37 Aligned_cols=235 Identities=26% Similarity=0.355 Sum_probs=187.8
Q ss_pred cccccceecccCceEEEEEEEc-CCceEEEEEechhhH--HHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEe
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYE--RALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEY 803 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~ 803 (1007)
+|+..+.||+|++|.||+|+.. +++.||+|.+..... ...+.+.+|++++++++|||++++++++.+.+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4778899999999999999866 588999999976542 4567899999999999999999999999999999999999
Q ss_pred cCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCccc
Q 001838 804 MPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLS 871 (1007)
Q Consensus 804 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~~~ 871 (1007)
+++++|.+++... ..+++..+..++.|++.|+.|| |+.+|+|+++ .+|+|||.+.........
T Consensus 81 ~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~~l~~l---H~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~- 155 (254)
T cd06627 81 AENGSLRQIIKKF-GPFPESLVAVYVYQVLQGLAYL---HEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD- 155 (254)
T ss_pred CCCCcHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHH---hhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCccc-
Confidence 9999999999765 4589999999999999999999 6779999966 489999999977543221
Q ss_pred ccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchh
Q 001838 872 MQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEE 951 (1007)
Q Consensus 872 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~ 951 (1007)
.....++..|+|||+.....++.++||||+|+++|||++|+.||..... ......... . ..
T Consensus 156 -~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~----~~~~~~~~~-~------------~~- 216 (254)
T cd06627 156 -DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP----MAALFRIVQ-D------------DH- 216 (254)
T ss_pred -ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH----HHHHHHHhc-c------------CC-
Confidence 2334688899999998877789999999999999999999999875321 111000000 0 00
Q ss_pred hhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001838 952 RYFAAKEQSLLSILNLATECTIESPGKRINAREIVT 987 (1007)
Q Consensus 952 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~ 987 (1007)
...+......+.+++.+|+..+|++|||+.|++.
T Consensus 217 --~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 217 --PPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred --CCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 0001112346889999999999999999999875
No 366
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.96 E-value=2.8e-28 Score=264.44 Aligned_cols=239 Identities=21% Similarity=0.267 Sum_probs=182.7
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechh-----hHHHHHHHHHHHHHHHhcCCCceeEEEEEEecC--Cee
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQR-----YERALKSFQDECEVMKRIRHRNLVKIISACSND--DFK 797 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~ 797 (1007)
.+|+..+.||+|+||.||+|+.. +|..||+|++... ..+..+.+.+|++++++++||||+++++++.+. +..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 46888999999999999999865 5899999987532 234456789999999999999999999998764 468
Q ss_pred EEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecC
Q 001838 798 ALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLN 865 (1007)
Q Consensus 798 ~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~ 865 (1007)
++||||+++++|.+++.... .+++....+++.|++.|+.|| |+.+++|+++ ++|+|||+++...
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~~i~~al~~L---H~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~ 157 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYG-ALTENVTRRYTRQILQGVSYL---HSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQ 157 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHEEEcCCCCEEECccccccccc
Confidence 89999999999999987644 378888999999999999999 5778999865 3899999998653
Q ss_pred CCCc-ccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhh
Q 001838 866 GQDQ-LSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDT 944 (1007)
Q Consensus 866 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~ 944 (1007)
.... ........|+..|+|||++.+..++.++|||||||++|||++|+.||....... .+.+.
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----------------~~~~~ 221 (264)
T cd06653 158 TICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMA----------------AIFKI 221 (264)
T ss_pred cccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHH----------------HHHHH
Confidence 2111 111123468899999999988889999999999999999999999987531110 00000
Q ss_pred hhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 945 NLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 945 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
...... ...+.....++.+++.+|++ +|.+||++.+++.+
T Consensus 222 ~~~~~~---~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~ 261 (264)
T cd06653 222 ATQPTK---PMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRH 261 (264)
T ss_pred HcCCCC---CCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcC
Confidence 000000 00111234568999999999 47999999988753
No 367
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.96 E-value=2.2e-28 Score=268.21 Aligned_cols=254 Identities=22% Similarity=0.254 Sum_probs=187.9
Q ss_pred ccccceecccCceEEEEEEEc-CCceEEEEEechhhH--HHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEec
Q 001838 728 FSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYE--RALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYM 804 (1007)
Q Consensus 728 ~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~ 804 (1007)
|+..+.||+|++|.||+|... +|+.||+|+++.... .....+.+|++++++++||||+++++++.+++..++||||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 566788999999999999875 688999999875432 24567889999999999999999999999999999999999
Q ss_pred CCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCcccc
Q 001838 805 PNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLSM 872 (1007)
Q Consensus 805 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~~~~ 872 (1007)
++ ++.+++......+++..+..++.|++.|+.|| |..+|+|+++ .||+|||.+....... ..
T Consensus 81 ~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~L---H~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~--~~ 154 (283)
T cd05118 81 DT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFC---HSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV--RP 154 (283)
T ss_pred CC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHH---HHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc--cc
Confidence 75 89888877555689999999999999999999 5678999865 3899999998775432 11
Q ss_pred cccccCCcccccccccccC-CCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhc---CccHHHHhh---h-
Q 001838 873 QTQTLATIGYMAPEYGVQG-RVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLL---PISVMEVID---T- 944 (1007)
Q Consensus 873 ~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~---~~~~~~~~d---~- 944 (1007)
.....++..|+|||.+... .++.++||||+||++|+|+||+.||......+ .+........ +.......+ .
T Consensus 155 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (283)
T cd05118 155 YTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEID-QLFKIFRTLGTPDPEVWPKFTSLARNY 233 (283)
T ss_pred ccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHcCCCchHhcccchhhhhhh
Confidence 2234578899999998776 68999999999999999999999986532111 0111111000 000000000 0
Q ss_pred --hhcc-chhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 945 --NLLS-GEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 945 --~~~~-~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
.... .........+....++.+++.+||+.||.+||++.|++..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 234 KFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred hhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 0000 0000111223346689999999999999999999999863
No 368
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.96 E-value=3.1e-28 Score=266.05 Aligned_cols=230 Identities=20% Similarity=0.257 Sum_probs=172.5
Q ss_pred eecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHH---HHhcCCCceeEEEEEEecCCeeEEEEEecC
Q 001838 733 LLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEV---MKRIRHRNLVKIISACSNDDFKALIMEYMP 805 (1007)
Q Consensus 733 ~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~---l~~l~H~niv~l~~~~~~~~~~~lv~E~~~ 805 (1007)
.||+|+||.||+|... +|+.||+|.+.... ......+..|..+ ++...||||+++++++.+.+..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999999999865 58899999986532 1112234444443 444579999999999999999999999999
Q ss_pred CCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCccccc
Q 001838 806 NGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQ 873 (1007)
Q Consensus 806 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~~ 873 (1007)
+|+|.+++.... .+++..+..++.|+++|++|| |+.+|+|++++ |++|||+++...... .
T Consensus 81 g~~L~~~l~~~~-~l~~~~~~~~~~ql~~~l~~l---H~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~----~ 152 (278)
T cd05606 81 GGDLHYHLSQHG-VFSEAEMRFYAAEIILGLEHM---HNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK----P 152 (278)
T ss_pred CCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccC----C
Confidence 999999887543 589999999999999999999 56789999763 799999998653221 1
Q ss_pred ccccCCcccccccccccC-CCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhh
Q 001838 874 TQTLATIGYMAPEYGVQG-RVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEER 952 (1007)
Q Consensus 874 ~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~ 952 (1007)
....|+..|+|||++..+ .++.++||||+||++|||++|+.||................. ...
T Consensus 153 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~--------~~~-------- 216 (278)
T cd05606 153 HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT--------MAV-------- 216 (278)
T ss_pred cCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhc--------cCC--------
Confidence 234689999999998754 589999999999999999999999975322111100000000 000
Q ss_pred hHHHHHHHHHHHHHHHhhcCCCCCCCCC-----CHHHHHHH
Q 001838 953 YFAAKEQSLLSILNLATECTIESPGKRI-----NAREIVTG 988 (1007)
Q Consensus 953 ~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~evl~~ 988 (1007)
..+.....++.+++.+|+..+|++|| ++.|++++
T Consensus 217 --~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~ 255 (278)
T cd05606 217 --ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH 255 (278)
T ss_pred --CCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhC
Confidence 00111245688999999999999999 99999864
No 369
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.96 E-value=7.3e-29 Score=268.99 Aligned_cols=234 Identities=24% Similarity=0.336 Sum_probs=181.2
Q ss_pred ecccCceEEEEEEEc-CCceEEEEEechhhH---HHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecCCCCh
Q 001838 734 LGIGSFGSVYVARLQ-DGMEVAVKVFHQRYE---RALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSL 809 (1007)
Q Consensus 734 ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~gsL 809 (1007)
||+|+||.||+|+.. +|+.||+|++..... ...+.+.+|++++++++||||+++++.+..++..|+||||+++|+|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999987 499999999975432 4456789999999999999999999999999999999999999999
Q ss_pred hHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCc------cc
Q 001838 810 ENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQ------LS 871 (1007)
Q Consensus 810 ~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~------~~ 871 (1007)
.+++.+.. .+++..+..++.|+++||+|| |..+++|+++. |++|||++........ ..
T Consensus 81 ~~~l~~~~-~~~~~~~~~i~~qi~~~L~~l---H~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 156 (265)
T cd05579 81 ASLLENVG-SLDEDVARIYIAEIVLALEYL---HSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEK 156 (265)
T ss_pred HHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccc
Confidence 99997654 589999999999999999999 56789999663 8999999886543211 11
Q ss_pred ccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchh
Q 001838 872 MQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEE 951 (1007)
Q Consensus 872 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~ 951 (1007)
......++..|+|||......++.++||||||+++||+++|+.||...... ....... .... .
T Consensus 157 ~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~-----~~~~~~~--------~~~~-~--- 219 (265)
T cd05579 157 EDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE-----EIFQNIL--------NGKI-E--- 219 (265)
T ss_pred cccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHh--------cCCc-C---
Confidence 223346788999999988888999999999999999999999999753211 1111100 0000 0
Q ss_pred hhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 001838 952 RYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLL 990 (1007)
Q Consensus 952 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~ 990 (1007)
.+........+.+++.+|++.+|++|||+.++.+.|+
T Consensus 220 --~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 220 --WPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred --CCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 0000001456899999999999999999955555443
No 370
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.96 E-value=4.9e-30 Score=272.96 Aligned_cols=232 Identities=20% Similarity=0.313 Sum_probs=185.5
Q ss_pred cceecccCceEEEEEEEc-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecCCC
Q 001838 731 NNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY--ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNG 807 (1007)
Q Consensus 731 ~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~g 807 (1007)
.+++|+|-||+||-|.++ +|+.||||++++-. .+...+.++|+.||.+++||.||.+...|+..+..++|||-+.|
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G- 647 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG- 647 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc-
Confidence 478999999999999865 79999999997543 23447889999999999999999999999999999999999965
Q ss_pred ChhHh-hhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc---------------ccceeecceecCCCCccc
Q 001838 808 SLENR-LYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA---------------HISDFSIAKFLNGQDQLS 871 (1007)
Q Consensus 808 sL~~~-l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~---------------kl~DFGla~~~~~~~~~~ 871 (1007)
+..++ |....+.++......++.||+.||+|| |-++|||+|++ |+||||+|+.+.+..
T Consensus 648 DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~L---H~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks--- 721 (888)
T KOG4236|consen 648 DMLEMILSSEKGRLPERITKFLVTQILVALRYL---HFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS--- 721 (888)
T ss_pred hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHh---hhcceeeccCCchheeeccCCCCCceeeccccceeecchhh---
Confidence 55554 455566788888888999999999999 67899999875 999999999986442
Q ss_pred ccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchh
Q 001838 872 MQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEE 951 (1007)
Q Consensus 872 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~ 951 (1007)
-..+++||+.|+|||++..+.|...-|+||.|||+|.-++|..||.+.. ++.+.+......
T Consensus 722 FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdE----------------dIndQIQNAaFM--- 782 (888)
T KOG4236|consen 722 FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDE----------------DINDQIQNAAFM--- 782 (888)
T ss_pred hhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCcc----------------chhHHhhccccc---
Confidence 2356889999999999999999999999999999999999999997521 111222111100
Q ss_pred hhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 952 RYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 952 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
.......+.....++++...++..-++|.|....+.+
T Consensus 783 yPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh 819 (888)
T KOG4236|consen 783 YPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSH 819 (888)
T ss_pred cCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccc
Confidence 0011123445578899999999999999998877654
No 371
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.96 E-value=6.7e-29 Score=279.78 Aligned_cols=253 Identities=23% Similarity=0.289 Sum_probs=184.8
Q ss_pred hcccccccceecccCceEEEEEEEc-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCe----
Q 001838 724 ATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY--ERALKSFQDECEVMKRIRHRNLVKIISACSNDDF---- 796 (1007)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~---- 796 (1007)
..++|...+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.++++++||||+++.+++...+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 4678999999999999999999976 58899999986432 2334667889999999999999999998876554
Q ss_pred --eEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecce
Q 001838 797 --KALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAK 862 (1007)
Q Consensus 797 --~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~ 862 (1007)
.++|+||+ +++|.+++... .+++..+..++.|+++|++|| |+.+|+|+++. ||+|||++.
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~~~~ql~~aL~~L---H~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~ 166 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKCQ--KLSDDHIQFLVYQILRGLKYI---HSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 166 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHeEECCCCCEEEccccccc
Confidence 89999999 56999988763 489999999999999999999 56789999663 899999998
Q ss_pred ecCCCCcccccccccCCccccccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHH----------
Q 001838 863 FLNGQDQLSMQTQTLATIGYMAPEYGVQ-GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVN---------- 931 (1007)
Q Consensus 863 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~---------- 931 (1007)
..... .....++..|+|||.+.. ..++.++|||||||++|||++|+.||......+ .+.....
T Consensus 167 ~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~-~~~~i~~~~~~~~~~~~ 240 (343)
T cd07851 167 HTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHID-QLKRIMNLVGTPDEELL 240 (343)
T ss_pred ccccc-----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHhcCCCCHHHH
Confidence 76432 233467889999998765 367899999999999999999999997432110 0111111
Q ss_pred -hhcCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 932 -DLLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 932 -~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
..........+....................++.+++.+|++.+|++|||+.||++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 241 QKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred hhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 111011111111100000000001111224678999999999999999999999864
No 372
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.96 E-value=6.4e-29 Score=268.82 Aligned_cols=237 Identities=22% Similarity=0.309 Sum_probs=181.6
Q ss_pred cccccceecccCceEEEEEEEcC-CceEEEEEechhh-----HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEE
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRY-----ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALI 800 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~~-g~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 800 (1007)
+|...+.||+|+||+||++.... +..+++|+++... .....++..|+.++++++||||+++++++.+.+..++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 47788999999999999998653 4556666665321 22334577899999999999999999999998899999
Q ss_pred EEecCCCChhHhhhc---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc-----------cccceeecceecCC
Q 001838 801 MEYMPNGSLENRLYS---GTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV-----------AHISDFSIAKFLNG 866 (1007)
Q Consensus 801 ~E~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~-----------~kl~DFGla~~~~~ 866 (1007)
|||+++++|.+++.. ....+++..+..++.|++.|+.|| |+.+++|+++ .|++|||+++....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l---H~~~i~h~~l~~~nili~~~~~~l~d~g~~~~~~~ 157 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYM---HQRRILHRDLKAKNIFLKNNLLKIGDFGVSRLLMG 157 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHH---HHcCccccCCChhheEeecCCEeecccCceeecCC
Confidence 999999999998863 234689999999999999999999 5789999865 38999999987643
Q ss_pred CCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhh
Q 001838 867 QDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNL 946 (1007)
Q Consensus 867 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~ 946 (1007)
... ......|++.|+|||+.....++.++||||||+++|+|++|+.||.... ........ .....
T Consensus 158 ~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~-----~~~~~~~~--------~~~~~ 222 (260)
T cd08222 158 SCD--LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN-----FLSVVLRI--------VEGPT 222 (260)
T ss_pred Ccc--cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc-----HHHHHHHH--------HcCCC
Confidence 322 1233468889999999888889999999999999999999999986421 11111110 00000
Q ss_pred ccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 947 LSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 947 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
...+.....++.+++.+||..+|++||++.|+++.
T Consensus 223 -------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 223 -------PSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred -------CCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence 00011234578899999999999999999999864
No 373
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.96 E-value=2.1e-28 Score=275.13 Aligned_cols=257 Identities=21% Similarity=0.215 Sum_probs=181.6
Q ss_pred ccccc-cceecccCceEEEEEEEc-CCceEEEEEechhhHHH--------------HHHHHHHHHHHHhcCCCceeEEEE
Q 001838 726 DRFSK-NNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERA--------------LKSFQDECEVMKRIRHRNLVKIIS 789 (1007)
Q Consensus 726 ~~~~~-~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~--------------~~~~~~E~~~l~~l~H~niv~l~~ 789 (1007)
++|.. .+.||+|+||+||+|... +++.||||+++...... ...+.+|++++++++||||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 45654 467999999999999865 68999999986432111 124778999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccce
Q 001838 790 ACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISD 857 (1007)
Q Consensus 790 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~D 857 (1007)
++..++..++||||++ |+|.+++.... .+++.....++.|++.||+|| |+.+|+|+++. |++|
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~ql~~aL~~L---H~~~i~H~dl~~~nill~~~~~~kl~d 162 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDRKI-RLTESQVKCILLQILNGLNVL---HKWYFMHRDLSPANIFINSKGICKIAD 162 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCeecccccHHHeEECCCCCEEECC
Confidence 9999999999999997 69999886543 478889999999999999999 57889999663 8999
Q ss_pred eecceecCCCCc------------ccccccccCCcccccccccccC-CCCchhhHHHHHHHHHHHHhCCCCCCccccCcc
Q 001838 858 FSIAKFLNGQDQ------------LSMQTQTLATIGYMAPEYGVQG-RVSTRGDVYSYGIMLMETFTGKKPTDEIFIGEL 924 (1007)
Q Consensus 858 FGla~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~ 924 (1007)
||+++....... ........++..|+|||++.+. .++.++|||||||++|||++|+.||......+
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~- 241 (335)
T PTZ00024 163 FGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEID- 241 (335)
T ss_pred ccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-
Confidence 999987641110 0111233568899999988764 47999999999999999999999997532211
Q ss_pred hHHHHHHhhc---CccHHHHhh-----hhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 925 SLSRWVNDLL---PISVMEVID-----TNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 925 ~l~~~~~~~~---~~~~~~~~d-----~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
.+........ +....+..+ +..................++.+++.+|++.+|++|||+.|++..
T Consensus 242 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~ 313 (335)
T PTZ00024 242 QLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKH 313 (335)
T ss_pred HHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcC
Confidence 1111111000 000000000 000000000001111224568899999999999999999999874
No 374
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.96 E-value=1.9e-28 Score=268.63 Aligned_cols=252 Identities=20% Similarity=0.238 Sum_probs=182.3
Q ss_pred ccccceecccCceEEEEEEEc-CCceEEEEEechhhH-HHHHHHHHHHHHHHhcC-CCceeEEEEEEecCCeeEEEEEec
Q 001838 728 FSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYE-RALKSFQDECEVMKRIR-HRNLVKIISACSNDDFKALIMEYM 804 (1007)
Q Consensus 728 ~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~E~~ 804 (1007)
|+..+.||+|+||+||+|+.. +++.||||++..... .......+|+..+++++ ||||+++++++.+++..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 566789999999999999976 488999999875432 12234567999999999 999999999999999999999999
Q ss_pred CCCChhHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCccc
Q 001838 805 PNGSLENRLYSGT-CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLS 871 (1007)
Q Consensus 805 ~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~~~ 871 (1007)
+|+|.+++.... ..+++..+..++.|++.||.|| |+.+++|+++ .+|+|||+++.......
T Consensus 81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~L---h~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~-- 154 (283)
T cd07830 81 -EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHI---HKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP-- 154 (283)
T ss_pred -CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCChhhEEEcCCCCEEEeecccceeccCCCC--
Confidence 789999887654 4689999999999999999999 5678999865 38999999987643222
Q ss_pred ccccccCCccccccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcC----ccHH------H
Q 001838 872 MQTQTLATIGYMAPEYGVQ-GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLP----ISVM------E 940 (1007)
Q Consensus 872 ~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~----~~~~------~ 940 (1007)
.....++..|+|||++.. ..++.++|||||||++|||++|+.||......+ .......... .... .
T Consensus 155 -~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (283)
T cd07830 155 -YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEID--QLYKICSVLGTPTKQDWPEGYKLAS 231 (283)
T ss_pred -cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHH--HHHHHHHhcCCCChhhhhhHhhhhc
Confidence 123468889999998754 457999999999999999999999986532111 1111100000 0000 0
Q ss_pred Hhhhhhccchhh-hHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 941 VIDTNLLSGEER-YFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 941 ~~d~~~~~~~~~-~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
.++......... .....+....++.+++.+|++.+|++|||+.|++..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 232 KLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred cccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 000000000000 000011113568999999999999999999999764
No 375
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.96 E-value=3e-29 Score=260.10 Aligned_cols=263 Identities=20% Similarity=0.268 Sum_probs=196.6
Q ss_pred ccccHHHHHHhcccccccceecccCceEEEEEEEc-CCceEEEEEechhhHHHHHHHHHHHHHHHhcC-C-C----ceeE
Q 001838 714 RRFSYHELLQATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKSFQDECEVMKRIR-H-R----NLVK 786 (1007)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H-~----niv~ 786 (1007)
..+...|.. +++|.+...+|+|.||+|-.+... .+..||||+++.. .+..++.+-|++++.++. + | -+|+
T Consensus 79 ~v~~~gD~l--~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V-~kYreAa~iEi~vLqki~~~DP~g~~rcv~ 155 (415)
T KOG0671|consen 79 YVYQVGDIL--TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV-DKYREAALIEIEVLQKINESDPNGKFRCVQ 155 (415)
T ss_pred EEEEecccc--ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH-HHHhhHHHHHHHHHHHHHhcCCCCceEEEe
Confidence 344444544 678999999999999999999865 4789999999865 345577888999999994 2 3 3889
Q ss_pred EEEEEecCCeeEEEEEecCCCChhHhhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------
Q 001838 787 IISACSNDDFKALIMEYMPNGSLENRLYSG-TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------ 853 (1007)
Q Consensus 787 l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------ 853 (1007)
+.+||.-.++.++|+|.+ |-|++++|..+ -..++...+..|+.|++++++|| |+.+++|-|++
T Consensus 156 m~~wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fL---h~~kl~HTDLKPENILfvss~~~ 231 (415)
T KOG0671|consen 156 MRDWFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFL---HDLKLTHTDLKPENILFVSSEYF 231 (415)
T ss_pred eehhhhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHH---HhcceeecCCChheEEEeccceE
Confidence 999999999999999998 45999999874 35688999999999999999999 78889997543
Q ss_pred --------------------ccceeecceecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCC
Q 001838 854 --------------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGK 913 (1007)
Q Consensus 854 --------------------kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~ 913 (1007)
||+|||-|.+..... +..+.|..|+|||++.+-.++.++||||+||||+|+.||.
T Consensus 232 ~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h-----s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~ 306 (415)
T KOG0671|consen 232 KTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH-----STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGE 306 (415)
T ss_pred EEeccCCccceeccCCCcceEEEecCCcceeccCc-----ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccc
Confidence 689999999865432 4567899999999999999999999999999999999999
Q ss_pred CCCCcccc-CcchHHHHHHhhcCccHHHHh------hhh---------------h---ccchhhhHHHHHHHHHHHHHHH
Q 001838 914 KPTDEIFI-GELSLSRWVNDLLPISVMEVI------DTN---------------L---LSGEERYFAAKEQSLLSILNLA 968 (1007)
Q Consensus 914 ~p~~~~~~-~~~~l~~~~~~~~~~~~~~~~------d~~---------------~---~~~~~~~~~~~~~~~~~~~~l~ 968 (1007)
.-|+.-.. +...+.+-+-.-.|..+.... ... . .......+.....+..++++|+
T Consensus 307 ~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl 386 (415)
T KOG0671|consen 307 TLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLL 386 (415)
T ss_pred eecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHH
Confidence 98874221 111122211111111111111 000 0 0001111122334456799999
Q ss_pred hhcCCCCCCCCCCHHHHHHH
Q 001838 969 TECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 969 ~~cl~~~p~~Rpt~~evl~~ 988 (1007)
++|+.+||.+|+|++|++.+
T Consensus 387 ~~mL~fDP~~RiTl~EAL~H 406 (415)
T KOG0671|consen 387 RRMLEFDPARRITLREALSH 406 (415)
T ss_pred HHHHccCccccccHHHHhcC
Confidence 99999999999999999864
No 376
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.96 E-value=1.8e-28 Score=272.87 Aligned_cols=259 Identities=22% Similarity=0.231 Sum_probs=182.2
Q ss_pred cccccccceecccCceEEEEEEEc-CCceEEEEEechhhH--HHHHHHHHHHHHHHhcCCCceeEEEEEEecCC------
Q 001838 725 TDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYE--RALKSFQDECEVMKRIRHRNLVKIISACSNDD------ 795 (1007)
Q Consensus 725 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------ 795 (1007)
.++|+..+.||+|+||.||+|+.. +++.||||++..... .....+.+|++++++++||||+++++++.+..
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 578999999999999999999865 589999999864321 12245678999999999999999999875433
Q ss_pred --eeEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecc
Q 001838 796 --FKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIA 861 (1007)
Q Consensus 796 --~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla 861 (1007)
..++||||+++ ++.+.+......+++..+..++.|+++||+|| |+.+|+|+++ .|++|||++
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~l---H~~~i~H~dl~p~nil~~~~~~~~l~dfg~~ 162 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYL---HENHILHRDIKAANILIDNQGILKIADFGLA 162 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEECCCCCEEECcCccc
Confidence 46999999975 78777766555689999999999999999999 5778999976 389999999
Q ss_pred eecCCCCcc---------cccccccCCcccccccccccC-CCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHH
Q 001838 862 KFLNGQDQL---------SMQTQTLATIGYMAPEYGVQG-RVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVN 931 (1007)
Q Consensus 862 ~~~~~~~~~---------~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~ 931 (1007)
+........ ...+...|++.|+|||++.+. .++.++|||||||++|||++|++||.+..... .......
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~-~~~~~~~ 241 (311)
T cd07866 163 RPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDID-QLHLIFK 241 (311)
T ss_pred hhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHH
Confidence 865432111 111234578899999987654 58999999999999999999999997532211 1111111
Q ss_pred hhc--CccHH-------HHhhhhhccc-hhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 932 DLL--PISVM-------EVIDTNLLSG-EERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 932 ~~~--~~~~~-------~~~d~~~~~~-~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
... +.... ...+...... ..............+.+++.+|++.||++|||+.|++..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~ 308 (311)
T cd07866 242 LCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH 308 (311)
T ss_pred HhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence 000 00000 0000000000 000000111123568899999999999999999998753
No 377
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.96 E-value=4.3e-29 Score=291.65 Aligned_cols=241 Identities=24% Similarity=0.318 Sum_probs=174.8
Q ss_pred cccccccceecccCceEEEEEEEc-CCceEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecC--------
Q 001838 725 TDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY-ERALKSFQDECEVMKRIRHRNLVKIISACSND-------- 794 (1007)
Q Consensus 725 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-------- 794 (1007)
..+|+..+.+|+||||.||+++.+ ||+.+|||++.... .+......+|+.++++++|||||+++..+.+.
T Consensus 478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~e 557 (1351)
T KOG1035|consen 478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLE 557 (1351)
T ss_pred hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccccc
Confidence 356777889999999999999977 89999999997543 34456688999999999999999976544110
Q ss_pred --------------------------------------------------------------------------------
Q 001838 795 -------------------------------------------------------------------------------- 794 (1007)
Q Consensus 795 -------------------------------------------------------------------------------- 794 (1007)
T Consensus 558 i~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e 637 (1351)
T KOG1035|consen 558 IVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSE 637 (1351)
T ss_pred ccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccC
Confidence
Q ss_pred -------------------------------CeeEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcC
Q 001838 795 -------------------------------DFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGH 843 (1007)
Q Consensus 795 -------------------------------~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~ 843 (1007)
...||-||||+.-.+++++++....-.....++++.+|+.||.|+ |
T Consensus 638 ~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYI---H 714 (1351)
T KOG1035|consen 638 GSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYI---H 714 (1351)
T ss_pred CccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHH---H
Confidence 013788999999888888876553224667889999999999999 7
Q ss_pred CCCceecccc------------ccceeecceecC----------------CCCcccccccccCCcccccccccccC---C
Q 001838 844 STPIIHYMVA------------HISDFSIAKFLN----------------GQDQLSMQTQTLATIGYMAPEYGVQG---R 892 (1007)
Q Consensus 844 ~~~ivH~~~~------------kl~DFGla~~~~----------------~~~~~~~~~~~~gt~~y~aPE~~~~~---~ 892 (1007)
+.+|||||++ ||+|||+|+... ........++.+||.-|+|||++.+. +
T Consensus 715 ~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~ 794 (1351)
T KOG1035|consen 715 DQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNK 794 (1351)
T ss_pred hCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccccccc
Confidence 8889999875 999999998721 01111234667899999999998764 4
Q ss_pred CCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcC
Q 001838 893 VSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECT 972 (1007)
Q Consensus 893 ~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl 972 (1007)
|+.|+|+||+|||++||+. ||... +..+....... +..+... ..........-..++.+++
T Consensus 795 Yn~KiDmYSLGIVlFEM~y---PF~Ts----MERa~iL~~LR--------~g~iP~~----~~f~~~~~~~e~slI~~Ll 855 (1351)
T KOG1035|consen 795 YNSKIDMYSLGIVLFEMLY---PFGTS----MERASILTNLR--------KGSIPEP----ADFFDPEHPEEASLIRWLL 855 (1351)
T ss_pred ccchhhhHHHHHHHHHHhc---cCCch----HHHHHHHHhcc--------cCCCCCC----cccccccchHHHHHHHHHh
Confidence 9999999999999999984 55431 11111111111 1111000 0001111234567889999
Q ss_pred CCCCCCCCCHHHHHH
Q 001838 973 IESPGKRINAREIVT 987 (1007)
Q Consensus 973 ~~~p~~Rpt~~evl~ 987 (1007)
+.||.+||||.|+++
T Consensus 856 ~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 856 SHDPSKRPTATELLN 870 (1351)
T ss_pred cCCCccCCCHHHHhh
Confidence 999999999999986
No 378
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.96 E-value=1.7e-28 Score=269.83 Aligned_cols=243 Identities=23% Similarity=0.287 Sum_probs=183.9
Q ss_pred cccccceecccCceEEEEEEEc----CCceEEEEEechhh----HHHHHHHHHHHHHHHhc-CCCceeEEEEEEecCCee
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQ----DGMEVAVKVFHQRY----ERALKSFQDECEVMKRI-RHRNLVKIISACSNDDFK 797 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~----~g~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~ 797 (1007)
+|+..+.||+|+||.||+|+.. ++..||||+++... ....+.+.+|++++.++ +||||+++++++..++..
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 3677899999999999999743 57889999987532 23346788999999999 599999999999999999
Q ss_pred EEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecC
Q 001838 798 ALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLN 865 (1007)
Q Consensus 798 ~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~ 865 (1007)
++||||+++|+|.+++.... .+++.....++.|+++||+|| |..+++|+++ .+++|||+++...
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~ql~~~l~~l---H~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 156 (288)
T cd05583 81 HLILDYVNGGELFTHLYQRE-HFTESEVRVYIAEIVLALDHL---HQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFL 156 (288)
T ss_pred EEEEecCCCCcHHHHHhhcC-CcCHHHHHHHHHHHHHHHHHH---HHCCeeccCCCHHHeEECCCCCEEEEECccccccc
Confidence 99999999999999987643 478888999999999999999 4678999965 3899999998764
Q ss_pred CCCcccccccccCCcccccccccccCC--CCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhh
Q 001838 866 GQDQLSMQTQTLATIGYMAPEYGVQGR--VSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVID 943 (1007)
Q Consensus 866 ~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d 943 (1007)
..... ......|+..|+|||...+.. ++.++||||||+++|||++|+.||..... ......+.... ..
T Consensus 157 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~-~~~~~~~~~~~--------~~ 226 (288)
T cd05583 157 AEEEE-RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGE-QNSQSEISRRI--------LK 226 (288)
T ss_pred ccccc-ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcc-cchHHHHHHHH--------Hc
Confidence 33211 112346889999999887654 78899999999999999999999863211 10111111110 00
Q ss_pred hhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 001838 944 TNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLK 991 (1007)
Q Consensus 944 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~ 991 (1007)
. . . +.+......+.+++.+||+.+|++|||+++|.+.|.-
T Consensus 227 ~-~----~---~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 227 S-K----P---PFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred c-C----C---CCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 0 0 0 0011123467899999999999999999888776654
No 379
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.96 E-value=4e-28 Score=267.29 Aligned_cols=246 Identities=18% Similarity=0.175 Sum_probs=170.4
Q ss_pred ccccccceecccCceEEEEEEEcC----CceEEEEEechhhHHH-----------HHHHHHHHHHHHhcCCCceeEEEEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQD----GMEVAVKVFHQRYERA-----------LKSFQDECEVMKRIRHRNLVKIISA 790 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~H~niv~l~~~ 790 (1007)
++|...+.||+|+||+||+|...+ +..+|+|+........ ......+...+..+.|+||++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 579999999999999999998754 4466777543221100 0112233445566789999999998
Q ss_pred EecCC----eeEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------c
Q 001838 791 CSNDD----FKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------H 854 (1007)
Q Consensus 791 ~~~~~----~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------k 854 (1007)
+.... ..++++|++.. ++.+.+.... ..++..+..++.|++.||+|| |+.+|+|||++ +
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~i~~qi~~~l~~l---H~~~iiHrDiKp~Nill~~~~~~~ 166 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLVE-NTKEIFKRIK-CKNKKLIKNIMKDMLTTLEYI---HEHGISHGDIKPENIMVDGNNRGY 166 (294)
T ss_pred eeEecCCceEEEEEEehhcc-CHHHHHHhhc-cCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEcCCCcEE
Confidence 76543 45788888753 6666665432 356778889999999999999 57799999874 8
Q ss_pred cceeecceecCCCCcc-----cccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHH
Q 001838 855 ISDFSIAKFLNGQDQL-----SMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRW 929 (1007)
Q Consensus 855 l~DFGla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~ 929 (1007)
|+|||+|+........ .......||+.|+|||+..+..++.++|||||||++|||++|+.||........ ....
T Consensus 167 l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~-~~~~ 245 (294)
T PHA02882 167 IIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGN-LIHA 245 (294)
T ss_pred EEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchH-HHHH
Confidence 9999999876422111 111234699999999999988999999999999999999999999986422111 1110
Q ss_pred HHhhcCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 001838 930 VNDLLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGL 989 (1007)
Q Consensus 930 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L 989 (1007)
.. .+.+.. +..... ....++.++.+++..|+..+|++||++.++.+.+
T Consensus 246 ~~-------~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 246 AK-------CDFIKR-LHEGKI----KIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred hH-------HHHHHH-hhhhhh----ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 00 001000 000000 0112245689999999999999999999999876
No 380
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.95 E-value=8.1e-28 Score=264.70 Aligned_cols=240 Identities=24% Similarity=0.309 Sum_probs=181.7
Q ss_pred cccccceecccCceEEEEEEE----cCCceEEEEEechhh----HHHHHHHHHHHHHHHhc-CCCceeEEEEEEecCCee
Q 001838 727 RFSKNNLLGIGSFGSVYVARL----QDGMEVAVKVFHQRY----ERALKSFQDECEVMKRI-RHRNLVKIISACSNDDFK 797 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~----~~g~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~ 797 (1007)
+|+..+.||+|+||.||+|+. .+|..||+|++.... ....+.+.+|+.+++++ +|+||+++++++..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 367789999999999999986 368899999997532 22346788999999999 599999999999999999
Q ss_pred EEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecC
Q 001838 798 ALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLN 865 (1007)
Q Consensus 798 ~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~ 865 (1007)
|+||||+++|+|.+++.... .+++.....++.|+++||.|| |+.+++|+++ .||+|||+++...
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~l---H~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~ 156 (290)
T cd05613 81 HLILDYINGGELFTHLSQRE-RFKEQEVQIYSGEIVLALEHL---HKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFH 156 (290)
T ss_pred EEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HhCCeeccCCCHHHeEECCCCCEEEeeCccceecc
Confidence 99999999999999997653 478888888999999999999 5788999966 3899999998764
Q ss_pred CCCcccccccccCCcccccccccccC--CCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhh
Q 001838 866 GQDQLSMQTQTLATIGYMAPEYGVQG--RVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVID 943 (1007)
Q Consensus 866 ~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d 943 (1007)
.... .......|+..|+|||++... .++.++|||||||++|||++|+.||..... ......+.......
T Consensus 157 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~-~~~~~~~~~~~~~~------- 227 (290)
T cd05613 157 EDEV-ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGE-KNSQAEISRRILKS------- 227 (290)
T ss_pred cccc-cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCc-cccHHHHHHHhhcc-------
Confidence 3221 112235688999999998753 478899999999999999999999863211 11111111111000
Q ss_pred hhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCC-----CHHHHHHH
Q 001838 944 TNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRI-----NAREIVTG 988 (1007)
Q Consensus 944 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~evl~~ 988 (1007)
.. +.+......+.+++.+|++.+|++|| ++.++++.
T Consensus 228 -----~~----~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 228 -----EP----PYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred -----CC----CCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence 00 00111234678999999999999997 66777664
No 381
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.95 E-value=2e-28 Score=277.61 Aligned_cols=249 Identities=20% Similarity=0.286 Sum_probs=196.0
Q ss_pred ccHHHHHHhcccccccceecccCceEEEEEEEc-CCceEEEEEechhhHHHHHHHHHHHHHHHhc-CCCceeEEEEEEec
Q 001838 716 FSYHELLQATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKSFQDECEVMKRI-RHRNLVKIISACSN 793 (1007)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~ 793 (1007)
..++-+...++-|.+.++||.|.||.||+++.. +|+.+|||+...... ..++...|.++++.. .|||++.++|+|..
T Consensus 9 ~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d-~deEiE~eynil~~~~~hpnv~~fyg~~~k 87 (953)
T KOG0587|consen 9 IDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED-EEEEIELEYNMLKKYSHHPNVATFYGAFIK 87 (953)
T ss_pred cchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc-ccHHHHHHHHHHHhccCCCCcceEEEEEEE
Confidence 344555566788999999999999999999854 689999999876543 235677889999988 59999999999863
Q ss_pred -----CCeeEEEEEecCCCChhHhhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------cc
Q 001838 794 -----DDFKALIMEYMPNGSLENRLYSG-TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HI 855 (1007)
Q Consensus 794 -----~~~~~lv~E~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl 855 (1007)
++..|||||||.+||..++++.- +..++|..+..|.+.+++|+.+| |...++|||++ |+
T Consensus 88 ~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HL---H~nkviHRDikG~NiLLT~e~~VKL 164 (953)
T KOG0587|consen 88 KDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHL---HNNKVIHRDIKGQNVLLTENAEVKL 164 (953)
T ss_pred ecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHH---hhcceeeecccCceEEEeccCcEEE
Confidence 56899999999999999999742 34688999999999999999999 78889999875 89
Q ss_pred ceeecceecCCCCcccccccccCCcccccccccccC-----CCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHH
Q 001838 856 SDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQG-----RVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWV 930 (1007)
Q Consensus 856 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~ 930 (1007)
+|||.+..+... .....+.+||+.|||||++... .|+.++|+||+|++..||.-|.+|+.++....
T Consensus 165 vDFGvSaQldsT--~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmr------- 235 (953)
T KOG0587|consen 165 VDFGVSAQLDST--VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMR------- 235 (953)
T ss_pred eeeeeeeeeecc--cccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhh-------
Confidence 999999877432 2223456899999999998643 47889999999999999999999987643211
Q ss_pred HhhcCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 931 NDLLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 931 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
.+-... +........++...+++.+++..|+..|-++||++.+++++
T Consensus 236 ----------aLF~Ip-RNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 236 ----------ALFLIP-RNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred ----------hhccCC-CCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence 000000 11111222345667889999999999999999999998865
No 382
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.95 E-value=1e-27 Score=269.00 Aligned_cols=256 Identities=21% Similarity=0.224 Sum_probs=179.8
Q ss_pred cccccceecccCceEEEEEEEc-C--CceEEEEEechhh--HHHHHHHHHHHHHHHhc-CCCceeEEEEEEecC----Ce
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQ-D--GMEVAVKVFHQRY--ERALKSFQDECEVMKRI-RHRNLVKIISACSND----DF 796 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~-~--g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~----~~ 796 (1007)
+|...+.||+|+||.||+|+.. + +..||||++.... ....+.+.+|+++++++ +||||+++++++... ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4777899999999999999865 3 7789999987432 22346788899999999 499999999875432 45
Q ss_pred eEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceec
Q 001838 797 KALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFL 864 (1007)
Q Consensus 797 ~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~ 864 (1007)
.|+++||+. ++|.+++.... .+++..+..++.|++.||+|| |+.+|+|+|+ +||+|||+++..
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~L---H~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~ 155 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSGQ-PLTDAHFQSFIYQILCGLKYI---HSANVLHRDLKPGNLLVNADCELKICDFGLARGF 155 (332)
T ss_pred EEEEEeccc-CCHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCHHHeEEcCCCCEEeCcCCCceec
Confidence 789999986 68999886543 588999999999999999999 5778999975 389999999876
Q ss_pred CCCCcc--cccccccCCccccccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhh--cCcc-H
Q 001838 865 NGQDQL--SMQTQTLATIGYMAPEYGVQ-GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDL--LPIS-V 938 (1007)
Q Consensus 865 ~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~--~~~~-~ 938 (1007)
...... .......||..|+|||+..+ ..++.++||||+||++|||++|+.||....... .+...+... .+.. .
T Consensus 156 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~ 234 (332)
T cd07857 156 SENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVD-QLNQILQVLGTPDEETL 234 (332)
T ss_pred ccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHH-HHHHHHHHhCCCCHHHH
Confidence 432211 11233568999999998765 468999999999999999999999987532110 011111100 0000 0
Q ss_pred HHHhhhh-------hccch-hhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 939 MEVIDTN-------LLSGE-ERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 939 ~~~~d~~-------~~~~~-~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
....++. ..... .......+.....+.+++.+|++.||++|||+.|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~ 292 (332)
T cd07857 235 SRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH 292 (332)
T ss_pred HhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0000000 00000 00000011123568999999999999999999999865
No 383
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.95 E-value=2.1e-28 Score=267.81 Aligned_cols=237 Identities=25% Similarity=0.372 Sum_probs=187.0
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcC-CCceeEEEEEEecCCeeEEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIR-HRNLVKIISACSNDDFKALI 800 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv 800 (1007)
++|...+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|++++++++ ||||+++++++.+.+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 36888899999999999999876 69999999997532 234467889999999998 99999999999999999999
Q ss_pred EEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCC
Q 001838 801 MEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQD 868 (1007)
Q Consensus 801 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~ 868 (1007)
|||+++++|.+++.+.. .+++..+..++.|++.||.|| |+.+++|+++ .+++|||++.......
T Consensus 81 ~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~ql~~~l~~L---h~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~ 156 (280)
T cd05581 81 LEYAPNGELLQYIRKYG-SLDEKCTRFYAAEILLALEYL---HSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNS 156 (280)
T ss_pred EcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeeecCCCHHHeEECCCCCEEecCCccccccCCcc
Confidence 99999999999997654 589999999999999999999 5678999866 3899999998764322
Q ss_pred cc------------------cccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHH
Q 001838 869 QL------------------SMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWV 930 (1007)
Q Consensus 869 ~~------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~ 930 (1007)
.. .......|+..|+|||+.....++.++||||||++++|+++|+.||..... ....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~~~--- 231 (280)
T cd05581 157 SPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNE--YLTF--- 231 (280)
T ss_pred ccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccH--HHHH---
Confidence 10 111234578899999998888899999999999999999999999975321 0000
Q ss_pred HhhcCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCH----HHHHH
Q 001838 931 NDLLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINA----REIVT 987 (1007)
Q Consensus 931 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~----~evl~ 987 (1007)
....+... ..+......+.+++.+||+.+|++||++ .|+++
T Consensus 232 --------~~~~~~~~--------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 232 --------QKILKLEY--------SFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred --------HHHHhcCC--------CCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 00000000 0011123468899999999999999999 77765
No 384
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.95 E-value=9.3e-28 Score=291.01 Aligned_cols=134 Identities=26% Similarity=0.401 Sum_probs=117.8
Q ss_pred cccccccceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEE
Q 001838 725 TDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALI 800 (1007)
Q Consensus 725 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 800 (1007)
.++|...+.||+|+||+||+|+.. +++.||||+++... ......+.+|+.+++.++||||+++++++...+..|+|
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 357889999999999999999976 68999999997542 33456788999999999999999999999999999999
Q ss_pred EEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecce
Q 001838 801 MEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAK 862 (1007)
Q Consensus 801 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~ 862 (1007)
|||+++|+|.+++.... .+++..+.+|+.||+.||+||| ..+|+|||++ ||+|||+++
T Consensus 83 mEy~~g~~L~~li~~~~-~l~~~~~~~i~~qil~aL~yLH---~~gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 83 MEYLIGGDVKSLLHIYG-YFDEEMAVKYISEVALALDYLH---RHGIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 99999999999997543 4788889999999999999995 5689999764 899999986
No 385
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.95 E-value=5.2e-28 Score=265.07 Aligned_cols=253 Identities=24% Similarity=0.257 Sum_probs=185.4
Q ss_pred ccccceecccCceEEEEEEEc-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEec
Q 001838 728 FSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY--ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYM 804 (1007)
Q Consensus 728 ~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~ 804 (1007)
|+..+.||+|+||.||+|+.. +++.||+|++.... ....+.+..|++++++++|+||+++++++.+.+..++||||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 456788999999999999876 48999999997653 333467788999999999999999999999999999999999
Q ss_pred CCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCcccc
Q 001838 805 PNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLSM 872 (1007)
Q Consensus 805 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~~~~ 872 (1007)
+ ++|.+++.+....+++..+.+++.|++.|++||| +.+|+|+++ +||+|||.++....... .
T Consensus 81 ~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~--~ 154 (282)
T cd07829 81 D-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCH---SHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR--T 154 (282)
T ss_pred C-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChheEEEcCCCCEEEecCCcccccCCCcc--c
Confidence 8 5999999876456899999999999999999994 678999865 48999999987643221 1
Q ss_pred cccccCCcccccccccccC-CCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcC---ccHHHHh------
Q 001838 873 QTQTLATIGYMAPEYGVQG-RVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLP---ISVMEVI------ 942 (1007)
Q Consensus 873 ~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~---~~~~~~~------ 942 (1007)
.....++..|+|||.+... .++.++|||||||++|||++|+.||..... ......+..... ......+
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (282)
T cd07829 155 YTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSE--IDQLFKIFQILGTPTEESWPGVTKLPDY 232 (282)
T ss_pred cCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccH--HHHHHHHHHHhCCCcHHHHHhhcccccc
Confidence 2234567889999998776 789999999999999999999999865321 111111111100 0000000
Q ss_pred hhhhccchh-hhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 943 DTNLLSGEE-RYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 943 d~~~~~~~~-~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
+........ ......+....++.+++.+||+.+|++||++.|++..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 279 (282)
T cd07829 233 KPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH 279 (282)
T ss_pred cccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence 000000000 0000111124578999999999999999999999863
No 386
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=9.3e-29 Score=256.21 Aligned_cols=236 Identities=23% Similarity=0.291 Sum_probs=181.8
Q ss_pred HHHHHHhcccccccceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhc-CCCceeEEEEEEe
Q 001838 718 YHELLQATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRI-RHRNLVKIISACS 792 (1007)
Q Consensus 718 ~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~ 792 (1007)
-.+..+++ +|....+||+|+||+|..|.-+ +.+.+|||++++.. ....+--+.|-++|.-- +-|.+|++..+|.
T Consensus 342 ~~d~i~~t-DFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQ 420 (683)
T KOG0696|consen 342 KRDRIKAT-DFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQ 420 (683)
T ss_pred cccceeec-ccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhh
Confidence 33444444 6888999999999999999765 46789999997653 22234445677777765 5789999999999
Q ss_pred cCCeeEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeec
Q 001838 793 NDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSI 860 (1007)
Q Consensus 793 ~~~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGl 860 (1007)
.-+..|.||||+.||+|--++.+-+ .+.+..+.-+|.+||-||-|| |+++|+.||++ ||+|||+
T Consensus 421 TmDRLyFVMEyvnGGDLMyhiQQ~G-kFKEp~AvFYAaEiaigLFFL---h~kgIiYRDLKLDNvmLd~eGHiKi~DFGm 496 (683)
T KOG0696|consen 421 TMDRLYFVMEYVNGGDLMYHIQQVG-KFKEPVAVFYAAEIAIGLFFL---HSKGIIYRDLKLDNVMLDSEGHIKIADFGM 496 (683)
T ss_pred hhhheeeEEEEecCchhhhHHHHhc-ccCCchhhhhhHHHHHHhhhh---hcCCeeeeeccccceEeccCCceEeeeccc
Confidence 9999999999999999988887543 366777888999999999999 89999999774 8999999
Q ss_pred ceecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHH
Q 001838 861 AKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVME 940 (1007)
Q Consensus 861 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 940 (1007)
++.---+. .++.+.+||+.|+|||.+...+|+..+|+|||||+||||+.|++||++...++ +-+ .
T Consensus 497 cKEni~~~--~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~e--lF~-----------a 561 (683)
T KOG0696|consen 497 CKENIFDG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE--LFQ-----------A 561 (683)
T ss_pred ccccccCC--cceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHH--HHH-----------H
Confidence 98643222 23456799999999999999999999999999999999999999999743221 111 1
Q ss_pred HhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 001838 941 VIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRIN 981 (1007)
Q Consensus 941 ~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt 981 (1007)
+.+... ..+...+.++.++....+...|.+|..
T Consensus 562 I~ehnv--------syPKslSkEAv~ickg~ltK~P~kRLG 594 (683)
T KOG0696|consen 562 IMEHNV--------SYPKSLSKEAVAICKGLLTKHPGKRLG 594 (683)
T ss_pred HHHccC--------cCcccccHHHHHHHHHHhhcCCccccC
Confidence 111111 112223556788888889999999864
No 387
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.95 E-value=4.8e-28 Score=232.95 Aligned_cols=252 Identities=18% Similarity=0.271 Sum_probs=194.9
Q ss_pred hcccccccceecccCceEEEEEE-EcCCceEEEEEechhhHHHHHHHHHHHHHHHhcC-CCceeEEEEEEecCC--eeEE
Q 001838 724 ATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRYERALKSFQDECEVMKRIR-HRNLVKIISACSNDD--FKAL 799 (1007)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~--~~~l 799 (1007)
..++|++.+.+|+|.|++||.|. ..+.+.++||++++... +.+.+|+.+|..++ |||||++++...++. ...|
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkk---kKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaL 112 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKK---KKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSL 112 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHHH---HHHHHHHHHHHhccCCCCeeehhhhhcCccccCchh
Confidence 35689999999999999999997 44678899999987654 55788999999998 999999999988754 5789
Q ss_pred EEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc-------------ccceeecceecCC
Q 001838 800 IMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA-------------HISDFSIAKFLNG 866 (1007)
Q Consensus 800 v~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~-------------kl~DFGla~~~~~ 866 (1007)
|+||+.+-+....... +...++..++.+++.||.|+ |+.||+|||++ +++|+|+|.+..+
T Consensus 113 iFE~v~n~Dfk~ly~t----l~d~dIryY~~elLkALdyC---HS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp 185 (338)
T KOG0668|consen 113 IFEYVNNTDFKQLYPT----LTDYDIRYYIYELLKALDYC---HSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP 185 (338)
T ss_pred HhhhhccccHHHHhhh----hchhhHHHHHHHHHHHHhHH---HhcCcccccCCcceeeechhhceeeeeecchHhhcCC
Confidence 9999999877665532 66677888999999999999 89999999986 6999999999877
Q ss_pred CCcccccccccCCcccccccccccC-CCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhh
Q 001838 867 QDQLSMQTQTLATIGYMAPEYGVQG-RVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTN 945 (1007)
Q Consensus 867 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~ 945 (1007)
..++. ..+.+..|.-||.+... .|+..-|+|||||++.+|+..+.||.........+++.++-....++...+++.
T Consensus 186 ~~eYn---VRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY 262 (338)
T KOG0668|consen 186 GKEYN---VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKY 262 (338)
T ss_pred Cceee---eeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHH
Confidence 65553 24567889999988764 589999999999999999999999987655555566555544433333333221
Q ss_pred hcc---------------chhhhHHH--HHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 946 LLS---------------GEERYFAA--KEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 946 ~~~---------------~~~~~~~~--~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
-.. ........ ..-...++++++.+.+.+|..+||||+|++.+
T Consensus 263 ~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H 322 (338)
T KOG0668|consen 263 QIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH 322 (338)
T ss_pred ccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence 111 00000000 00112578999999999999999999999876
No 388
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.95 E-value=1.2e-29 Score=249.62 Aligned_cols=246 Identities=24% Similarity=0.262 Sum_probs=182.8
Q ss_pred cccccHHHHHHhcccccccceecccCceEEEEEEEc-CCceEEEEEechhh-HHHHHHHHHHHHHHHhc-CCCceeEEEE
Q 001838 713 IRRFSYHELLQATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY-ERALKSFQDECEVMKRI-RHRNLVKIIS 789 (1007)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~ 789 (1007)
...|+-++++. ...||.|+||+|+|-.++ .|+..|||+++... ++..+++..|.++..+- +.||||+++|
T Consensus 58 ~~~F~~~~Lqd-------lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyG 130 (361)
T KOG1006|consen 58 LHTFTSDNLQD-------LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYG 130 (361)
T ss_pred ccccccchHHH-------HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhh
Confidence 44566555543 577999999999999866 69999999998654 46668899999877666 5999999999
Q ss_pred EEecCCeeEEEEEecCCCChhHhhhc----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------
Q 001838 790 ACSNDDFKALIMEYMPNGSLENRLYS----GTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------ 853 (1007)
Q Consensus 790 ~~~~~~~~~lv~E~~~~gsL~~~l~~----~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------ 853 (1007)
++..++..|+.||.|+- |++.+.+. ....+++.-.-.|+.-.+.||+||. ....|||||++
T Consensus 131 a~F~EGdcWiCMELMd~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK--~~lkiIHRDvKPSNILldr~G~v 207 (361)
T KOG1006|consen 131 ALFSEGDCWICMELMDI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLK--EELKIIHRDVKPSNILLDRHGDV 207 (361)
T ss_pred hhhcCCceeeeHHHHhh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHH--HHhhhhhccCChhheEEecCCCE
Confidence 99999999999999964 77654432 2345777777778888899999996 45679999885
Q ss_pred ccceeecceecCCCCcccccccccCCccccccccccc--CCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHH
Q 001838 854 HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQ--GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVN 931 (1007)
Q Consensus 854 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~ 931 (1007)
|+||||++..+.+. ...+..+|...|||||.+.. ..|+.++||||+|++|||++||+.||.....
T Consensus 208 KLCDFGIcGqLv~S---iAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s---------- 274 (361)
T KOG1006|consen 208 KLCDFGICGQLVDS---IAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS---------- 274 (361)
T ss_pred eeecccchHhHHHH---HHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH----------
Confidence 99999999876432 22355679999999998864 3599999999999999999999999985311
Q ss_pred hhcCccHHHHhhhhhccchhhhHHHH---HHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 932 DLLPISVMEVIDTNLLSGEERYFAAK---EQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 932 ~~~~~~~~~~~d~~~~~~~~~~~~~~---~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
+.+.+......... ....+ -+....+.+++..|+..|-++||...++.+.
T Consensus 275 ------vfeql~~Vv~gdpp-~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 275 ------VFEQLCQVVIGDPP-ILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred ------HHHHHHHHHcCCCC-eecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 11111111110000 00000 1124568899999999999999999988764
No 389
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.95 E-value=5.8e-28 Score=223.61 Aligned_cols=257 Identities=19% Similarity=0.218 Sum_probs=185.0
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY--ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIME 802 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E 802 (1007)
.+|+..++||+|.||+||+|+.. +++.||+|+++-.. +.......+|+.+++.++|+|||+++++...+...-+|+|
T Consensus 2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe 81 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_pred cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHH
Confidence 35777889999999999999865 58899999987443 3334678899999999999999999999999999999999
Q ss_pred ecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcc
Q 001838 803 YMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQL 870 (1007)
Q Consensus 803 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~ 870 (1007)
||.. +|..+...-.+.++......++.|+.+|+.|+ |+..+.|||++ |++|||+|+...-. .
T Consensus 82 ~cdq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fc---hshnvlhrdlkpqnllin~ngelkladfglarafgip--v 155 (292)
T KOG0662|consen 82 FCDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFC---HSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIP--V 155 (292)
T ss_pred HhhH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhh---hhhhhhhccCCcceEEeccCCcEEecccchhhhcCCc--e
Confidence 9965 88888887777799999999999999999999 67789999775 89999999976422 1
Q ss_pred cccccccCCcccccccccccCC-CCchhhHHHHHHHHHHHHh-CCCCCCccccCc-chHHHHHHhhcCc----cHHHHhh
Q 001838 871 SMQTQTLATIGYMAPEYGVQGR-VSTRGDVYSYGIMLMETFT-GKKPTDEIFIGE-LSLSRWVNDLLPI----SVMEVID 943 (1007)
Q Consensus 871 ~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~-~~l~~~~~~~~~~----~~~~~~d 943 (1007)
...+..+-|.+|.+|.++.+.+ |++..|+||-|||+.|+.. |++-|.+...++ .....|.-....+ .+...-|
T Consensus 156 rcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpd 235 (292)
T KOG0662|consen 156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPD 235 (292)
T ss_pred EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCC
Confidence 2224456789999999988865 8999999999999999986 666665432221 1111122111111 0111111
Q ss_pred hhhccchhhh---HHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 944 TNLLSGEERY---FAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 944 ~~~~~~~~~~---~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
-......... ....+.....-.+++.+.+.-+|.+|.++.++++.
T Consensus 236 yk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh 283 (292)
T KOG0662|consen 236 YKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH 283 (292)
T ss_pred CcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence 1111000000 00111112234677778888899999999988764
No 390
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1.4e-28 Score=284.98 Aligned_cols=247 Identities=21% Similarity=0.295 Sum_probs=190.5
Q ss_pred HHHHHhcccccccceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecC
Q 001838 719 HELLQATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIISACSND 794 (1007)
Q Consensus 719 ~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 794 (1007)
.++....++|.+.++||+|+||.|..++++ +++.+|.|++.+.. ......|..|-++|..-..+=||.++.+|.+.
T Consensus 68 ~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~ 147 (1317)
T KOG0612|consen 68 KELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDE 147 (1317)
T ss_pred HHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCc
Confidence 455556788999999999999999999876 58899999998743 23346789999999999999999999999999
Q ss_pred CeeEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecce
Q 001838 795 DFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAK 862 (1007)
Q Consensus 795 ~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~ 862 (1007)
.+.|+|||||+||+|-.++.+.. .++...+..|+..|+-||+-+ |+.|+||||++ |++|||.+-
T Consensus 148 ~~LYlVMdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldsl---H~mgyVHRDiKPDNvLld~~GHikLADFGsCl 223 (1317)
T KOG0612|consen 148 RYLYLVMDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSL---HSMGYVHRDIKPDNVLLDKSGHIKLADFGSCL 223 (1317)
T ss_pred cceEEEEecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHH---HhccceeccCCcceeEecccCcEeeccchhHH
Confidence 99999999999999999998776 688887888999999999999 78999999886 899999998
Q ss_pred ecCCCCcccccccccCCccccccccccc-----CCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCcc
Q 001838 863 FLNGQDQLSMQTQTLATIGYMAPEYGVQ-----GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPIS 937 (1007)
Q Consensus 863 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~ 937 (1007)
.+..+.. ......+|||-|++||++.. +.|++.+|+||+||++|||+.|..||... .++.-.....
T Consensus 224 km~~dG~-V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYad-----slveTY~KIm--- 294 (1317)
T KOG0612|consen 224 KMDADGT-VRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYAD-----SLVETYGKIM--- 294 (1317)
T ss_pred hcCCCCc-EEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHH-----HHHHHHHHHh---
Confidence 7764332 33456789999999998752 57999999999999999999999999742 1221111111
Q ss_pred HHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCC---HHHHHHH
Q 001838 938 VMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRIN---AREIVTG 988 (1007)
Q Consensus 938 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt---~~evl~~ 988 (1007)
+ ......++.....+.+..+|+.+.+. +|+.|.. +.|+-.+
T Consensus 295 -----~----hk~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~H 338 (1317)
T KOG0612|consen 295 -----N----HKESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNH 338 (1317)
T ss_pred -----c----hhhhcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhC
Confidence 0 00000111112234567777776654 4777776 7777654
No 391
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.95 E-value=9.6e-28 Score=265.62 Aligned_cols=228 Identities=23% Similarity=0.272 Sum_probs=182.1
Q ss_pred cccccccceecccCceEEEEEEEc-CCceEEEEEechhhHHHHHHHHHHHHHHHhc-CCCceeEEEEEEecCCeeEEEEE
Q 001838 725 TDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKSFQDECEVMKRI-RHRNLVKIISACSNDDFKALIME 802 (1007)
Q Consensus 725 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~E 802 (1007)
++.|.....+|.|+|+.|-++... +++..|||++.+.. .+..+|+.++... +||||+++.+.|.+..+.|+|||
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e 396 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME 396 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence 566777788999999999999855 68899999998662 3345788777777 59999999999999999999999
Q ss_pred ecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc-------------ccceeecceecCCCCc
Q 001838 803 YMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA-------------HISDFSIAKFLNGQDQ 869 (1007)
Q Consensus 803 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~-------------kl~DFGla~~~~~~~~ 869 (1007)
++.||-+.+.+..... .. ..+..|+.+++.|+.|| |+++|||||++ +|+|||.++.....
T Consensus 397 ~l~g~ell~ri~~~~~-~~-~e~~~w~~~lv~Av~~L---H~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~-- 469 (612)
T KOG0603|consen 397 LLDGGELLRRIRSKPE-FC-SEASQWAAELVSAVDYL---HEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS-- 469 (612)
T ss_pred hccccHHHHHHHhcch-hH-HHHHHHHHHHHHHHHHH---HhcCeeecCCChhheeecCCCCcEEEEEechhhhCchh--
Confidence 9999998888876543 22 56777999999999999 56899999764 79999999987643
Q ss_pred ccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccc
Q 001838 870 LSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSG 949 (1007)
Q Consensus 870 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~ 949 (1007)
..+.+-|..|.|||+.....|++++||||+||+||||++|+.||.....+ . +..........
T Consensus 470 ---~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-~---ei~~~i~~~~~----------- 531 (612)
T KOG0603|consen 470 ---CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-I---EIHTRIQMPKF----------- 531 (612)
T ss_pred ---hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-H---HHHHhhcCCcc-----------
Confidence 12346688999999999899999999999999999999999999854322 1 11111111110
Q ss_pred hhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 950 EERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 950 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
....+..+.+|+.+||+.||.+||+|.|+...
T Consensus 532 -------s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h 563 (612)
T KOG0603|consen 532 -------SECVSDEAKDLLQQLLQVDPALRLGADEIGAH 563 (612)
T ss_pred -------ccccCHHHHHHHHHhccCChhhCcChhhhccC
Confidence 12345678999999999999999999999765
No 392
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.95 E-value=4.4e-27 Score=252.77 Aligned_cols=224 Identities=27% Similarity=0.342 Sum_probs=177.2
Q ss_pred ecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecCCCCh
Q 001838 734 LGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSL 809 (1007)
Q Consensus 734 ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~gsL 809 (1007)
||+|+||.||++... +++.||+|++.... ....+.+..|++++++++||||+++++.+..++..++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 699999999999876 58999999987543 22456789999999999999999999999999999999999999999
Q ss_pred hHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCccccccccc
Q 001838 810 ENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLSMQTQTL 877 (1007)
Q Consensus 810 ~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~~~~~~~~~ 877 (1007)
.+++.... .+++.....++.|++.|+.|+| +.+++|+++ ++++|||.+........ ......
T Consensus 81 ~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lh---~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~ 154 (250)
T cd05123 81 FSHLSKEG-RFSEERARFYAAEIVLALEYLH---SLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGS--RTNTFC 154 (250)
T ss_pred HHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcceEEEcCCCcEEEeecCcceecccCCC--cccCCc
Confidence 99997654 4889999999999999999994 688999865 37999999987643321 123456
Q ss_pred CCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhhHHHH
Q 001838 878 ATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYFAAK 957 (1007)
Q Consensus 878 gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 957 (1007)
++..|+|||...+..++.++|+||||+++||+++|+.||..... ....+.+. .... ..+
T Consensus 155 ~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~--~~~~~~~~-----------~~~~--------~~~ 213 (250)
T cd05123 155 GTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR--KEIYEKIL-----------KDPL--------RFP 213 (250)
T ss_pred CCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHh-----------cCCC--------CCC
Confidence 88899999998888889999999999999999999999965321 11111110 0000 000
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 001838 958 EQSLLSILNLATECTIESPGKRINARE 984 (1007)
Q Consensus 958 ~~~~~~~~~l~~~cl~~~p~~Rpt~~e 984 (1007)
.....++.+++.+|+..||++||++.+
T Consensus 214 ~~~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 214 EFLSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred CCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence 111346789999999999999999954
No 393
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.94 E-value=9.7e-29 Score=240.96 Aligned_cols=254 Identities=21% Similarity=0.328 Sum_probs=182.9
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecC--------
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY--ERALKSFQDECEVMKRIRHRNLVKIISACSND-------- 794 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-------- 794 (1007)
..|.....||+|.||+||+|+.+ +|+.||+|++-... +..-....+|+++|..++|+|++.+++.|...
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 45666788999999999999865 58889998764322 22334568999999999999999999888542
Q ss_pred CeeEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecce
Q 001838 795 DFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAK 862 (1007)
Q Consensus 795 ~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~ 862 (1007)
...|+||++|+. +|...|......++..++.+++.++..||.|+ |+..|+|||++ |++|||+|+
T Consensus 97 ~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~i---Hr~kilHRDmKaaNvLIt~dgilklADFGlar 172 (376)
T KOG0669|consen 97 ATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYI---HRNKILHRDMKAANVLITKDGILKLADFGLAR 172 (376)
T ss_pred ceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHH---HHhhHHhhcccHhhEEEcCCceEEeecccccc
Confidence 358999999987 89988887766788999999999999999999 78899999764 899999998
Q ss_pred ecCCCCc--ccccccccCCcccccccccccC-CCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhh------
Q 001838 863 FLNGQDQ--LSMQTQTLATIGYMAPEYGVQG-RVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDL------ 933 (1007)
Q Consensus 863 ~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~------ 933 (1007)
.....+. ....+..+-|.+|++||.+.+. .|+++.|||+-|||+.||.||.+-+++..... ....+...
T Consensus 173 ~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqq--ql~~Is~LcGs~tk 250 (376)
T KOG0669|consen 173 AFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQ--QLHLISQLCGSITK 250 (376)
T ss_pred ceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHH--HHHHHHHHhccCCc
Confidence 7643222 1223444569999999998875 59999999999999999999998776532211 11111111
Q ss_pred --cCc----cHHHHhhhh-hccchhhhHHHHHHHH------HHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 934 --LPI----SVMEVIDTN-LLSGEERYFAAKEQSL------LSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 934 --~~~----~~~~~~d~~-~~~~~~~~~~~~~~~~------~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
.|+ .+.+.+... +..+. ....++.. .+.++++..++..||.+|+++.+++.+
T Consensus 251 evWP~~d~lpL~~sie~ePl~~~~---~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh 315 (376)
T KOG0669|consen 251 EVWPNVDNLPLYQSIELEPLPKGQ---KRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNH 315 (376)
T ss_pred ccCCCcccchHHHhccCCCCCcch---hhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence 111 111222100 00000 00111112 268899999999999999999998765
No 394
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.94 E-value=1e-26 Score=247.60 Aligned_cols=209 Identities=18% Similarity=0.118 Sum_probs=162.8
Q ss_pred cCceEEEEEEEc-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecCCCChhHhhhc
Q 001838 737 GSFGSVYVARLQ-DGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYS 815 (1007)
Q Consensus 737 G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~ 815 (1007)
|.||+||+++.. +|+.||+|++.... .+.+|...+....||||+++++++.+.+..++||||+++|+|.+++.+
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 889999999875 68999999997643 233455555666799999999999999999999999999999999876
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcccccccccCCcccc
Q 001838 816 GTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYM 883 (1007)
Q Consensus 816 ~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~~~~~~gt~~y~ 883 (1007)
.. .+++..+..++.|++.||+|| |+.+|+|+|++ +++|||.+...... .....++..|+
T Consensus 79 ~~-~l~~~~~~~~~~ql~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~-----~~~~~~~~~y~ 149 (237)
T cd05576 79 FL-NIPEECVKRWAAEMVVALDAL---HREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS-----CDGEAVENMYC 149 (237)
T ss_pred hc-CCCHHHHHHHHHHHHHHHHHH---HhCCeeccCCCHHHEEEcCCCCEEEecccchhccccc-----cccCCcCcccc
Confidence 54 488999999999999999999 57889999774 89999988765422 12334677899
Q ss_pred cccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhhHHHHHHHHHH
Q 001838 884 APEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYFAAKEQSLLS 963 (1007)
Q Consensus 884 aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 963 (1007)
|||......++.++||||+||++|||++|+.|++....... ...... .+.....+
T Consensus 150 aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~---------------~~~~~~----------~~~~~~~~ 204 (237)
T cd05576 150 APEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGIN---------------THTTLN----------IPEWVSEE 204 (237)
T ss_pred CCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhcc---------------cccccC----------CcccCCHH
Confidence 99998888899999999999999999999988753211000 000000 00112346
Q ss_pred HHHHHhhcCCCCCCCCCCHHH
Q 001838 964 ILNLATECTIESPGKRINARE 984 (1007)
Q Consensus 964 ~~~l~~~cl~~~p~~Rpt~~e 984 (1007)
+.+++.+|++.||++||++.+
T Consensus 205 ~~~li~~~l~~dp~~R~~~~~ 225 (237)
T cd05576 205 ARSLLQQLLQFNPTERLGAGV 225 (237)
T ss_pred HHHHHHHHccCCHHHhcCCCc
Confidence 889999999999999999743
No 395
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.94 E-value=2.1e-28 Score=253.67 Aligned_cols=290 Identities=20% Similarity=0.204 Sum_probs=181.7
Q ss_pred cEEEEEeCCCCCcccCcccccCCCCCCEEEcCCCCCCCCCCccccCcccCcEEeccC-cccCCcchhhhhhcCCCCeecc
Q 001838 69 KVIVLNISGFNLQGTIPPQLGNLSSLETLDLSHNKLSGNIPSSIFNMHTLKLLDFRD-NQLFGSLSSFIFNMSSMLGIDL 147 (1007)
Q Consensus 69 ~v~~L~L~~~~l~~~~~~~l~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~LdL 147 (1007)
..+.++|..|+|+.+.+.+|..+++|+.||||+|+|+.+-|.+|.+|++|..|-+.+ |+|+......|.+|++|+-|++
T Consensus 68 ~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLll 147 (498)
T KOG4237|consen 68 ETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLL 147 (498)
T ss_pred cceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhc
Confidence 456666666666665556666666666666666666666666666666665555444 6666666666666666666666
Q ss_pred cCcccCCCCchhHhhcCCCCcEEEccCccccccCCccccCCCCCcEEEcccccCCCCCCcccccccccceEEcccCcCCC
Q 001838 148 SINRFSGELPANICKNLPNLKKLLLGRNMFHGKIPSTLSKCKQLEGLYLRFNNLSGAIPKEIGNLTKLKDIILNDNELRG 227 (1007)
Q Consensus 148 s~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 227 (1007)
.-|++. -++...|..+++|..|.|..|.+..+--.+|..+..++.+.+..|.+- ...+++.+... ..
T Consensus 148 Nan~i~-Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~i-----cdCnL~wla~~-------~a 214 (498)
T KOG4237|consen 148 NANHIN-CIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFI-----CDCNLPWLADD-------LA 214 (498)
T ss_pred Chhhhc-chhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccc-----cccccchhhhH-------Hh
Confidence 666665 555555566666666666666665333335666666666666655432 11222222111 11
Q ss_pred CCCcccCCccccceeeccCccccccccccccCC-CCCCeEEcccccccCcCCchhhcCCCCCcEEeccCCCCCCCCCccc
Q 001838 228 EIPQEMGNLPYLVRLTLATNNLVGVVPFTIFNM-STLKKLSLLENTLWGSLPSRIDLSLPNVEFLNLGTNRFSGNIPSSI 306 (1007)
Q Consensus 228 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~~~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 306 (1007)
..|.+++...-..-..+.++++..+.+..|..- .++..=..++....+..|..-|..+++|+.|+|++|+|+++-+.+|
T Consensus 215 ~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aF 294 (498)
T KOG4237|consen 215 MNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAF 294 (498)
T ss_pred hchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhh
Confidence 233345555555555566666655555444321 1221111122223356677777788888888888888888888888
Q ss_pred cccCCCCEEEecCCCcCCCCCcccccccccccccccccccccCCCCccccccccccccccEEEccCCCCC
Q 001838 307 TNASKLTVFQLRGNSFSGFIPNTIGNLRNLEFLNIADNYLTSSTPELSFLSSLTNCQKIRVLILAGNPLD 376 (1007)
Q Consensus 307 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~ 376 (1007)
..+.+++.|.|..|+|..+....|.++..|+.|+|.+|+|+...|. .|..+..|.+|.|-.|++.
T Consensus 295 e~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~-----aF~~~~~l~~l~l~~Np~~ 359 (498)
T KOG4237|consen 295 EGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPG-----AFQTLFSLSTLNLLSNPFN 359 (498)
T ss_pred cchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecc-----cccccceeeeeehccCccc
Confidence 8888888888888888877777788888888888888888876654 4666677777777777664
No 396
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.94 E-value=2.6e-26 Score=271.05 Aligned_cols=248 Identities=22% Similarity=0.238 Sum_probs=159.6
Q ss_pred hcccccccceecccCceEEEEEEEc-C----CceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEE------Ee
Q 001838 724 ATDRFSKNNLLGIGSFGSVYVARLQ-D----GMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISA------CS 792 (1007)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~----g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~------~~ 792 (1007)
..++|...+.||+|+||+||+|++. + +..||||++...... +.+..| .+....+.+++.++.. +.
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~--e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV--EIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh--HHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 5678999999999999999999875 4 689999998643221 111111 1222223333322221 24
Q ss_pred cCCeeEEEEEecCCCChhHhhhcCCCC-------------------CCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc
Q 001838 793 NDDFKALIMEYMPNGSLENRLYSGTCM-------------------LDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA 853 (1007)
Q Consensus 793 ~~~~~~lv~E~~~~gsL~~~l~~~~~~-------------------l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~ 853 (1007)
.+...++||||+++|+|.+++...... .....+..++.|++.||+|| |+.+|+|||++
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yL---H~~gIiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGL---HSTGIVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHH---HHCCEEeCcCC
Confidence 556789999999999999998754211 11233557899999999999 56799999764
Q ss_pred -------------ccceeecceecCCCCcccccccccCCcccccccccccC----------------------CCCchhh
Q 001838 854 -------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQG----------------------RVSTRGD 898 (1007)
Q Consensus 854 -------------kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~~~~~D 898 (1007)
||+|||+|+.+...... ......|++.|||||.+... .++.++|
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~~~-~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~D 361 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGINY-IPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFD 361 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCcccccccccc-CCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcc
Confidence 89999999876433222 22345789999999965322 2455779
Q ss_pred HHHHHHHHHHHHhCCCCCCcccc--------CcchHHHHHHhhcCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhh
Q 001838 899 VYSYGIMLMETFTGKKPTDEIFI--------GELSLSRWVNDLLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATE 970 (1007)
Q Consensus 899 vwS~Gvil~elltG~~p~~~~~~--------~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~ 970 (1007)
||||||++|||+++..|++.... .+.....|.....+. ....................+|+.+
T Consensus 362 VwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~d~~~~~~~dLi~~ 432 (566)
T PLN03225 362 IYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPR---------ASPDLRRGFEVLDLDGGAGWELLKS 432 (566)
T ss_pred cHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccc---------cchhhhhhhhhccccchHHHHHHHH
Confidence 99999999999998877653210 011122232211110 0000000000001112245689999
Q ss_pred cCCCCCCCCCCHHHHHHH
Q 001838 971 CTIESPGKRINAREIVTG 988 (1007)
Q Consensus 971 cl~~~p~~Rpt~~evl~~ 988 (1007)
|++.||++|||++|++++
T Consensus 433 mL~~dP~kR~ta~e~L~H 450 (566)
T PLN03225 433 MMRFKGRQRISAKAALAH 450 (566)
T ss_pred HccCCcccCCCHHHHhCC
Confidence 999999999999999986
No 397
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.94 E-value=4.1e-26 Score=261.93 Aligned_cols=246 Identities=19% Similarity=0.208 Sum_probs=168.0
Q ss_pred hcccccccceecccCceEEEEEEE-----------------cCCceEEEEEechhhHHHHH--------------HHHHH
Q 001838 724 ATDRFSKNNLLGIGSFGSVYVARL-----------------QDGMEVAVKVFHQRYERALK--------------SFQDE 772 (1007)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~Vy~~~~-----------------~~g~~vavK~~~~~~~~~~~--------------~~~~E 772 (1007)
..++|+..++||+|+||+||+|.. ..++.||||++........+ .+..|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 367899999999999999999964 23568999998643322222 23457
Q ss_pred HHHHHhcCCCce-----eEEEEEEec--------CCeeEEEEEecCCCChhHhhhcCC----------------------
Q 001838 773 CEVMKRIRHRNL-----VKIISACSN--------DDFKALIMEYMPNGSLENRLYSGT---------------------- 817 (1007)
Q Consensus 773 ~~~l~~l~H~ni-----v~l~~~~~~--------~~~~~lv~E~~~~gsL~~~l~~~~---------------------- 817 (1007)
+.++.+++|.++ ++++++|.. .+..++||||+++|+|.++++...
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 778888876654 677888753 346899999999999999986421
Q ss_pred -CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcccccccccCCccccc
Q 001838 818 -CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMA 884 (1007)
Q Consensus 818 -~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~~~~~~gt~~y~a 884 (1007)
..+++..+..++.|++.||.|| |+.+|+|||++ ||+|||+++........ ......+|+.|+|
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~l---H~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~-~~~~g~~tp~Y~a 378 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKL---HRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINF-NPLYGMLDPRYSP 378 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCcc-CccccCCCcceeC
Confidence 1245677888999999999999 56789999764 89999999765432211 1122345889999
Q ss_pred ccccccCC--------------------C--CchhhHHHHHHHHHHHHhCCC-CCCccccCc-------chHHHHHHhhc
Q 001838 885 PEYGVQGR--------------------V--STRGDVYSYGIMLMETFTGKK-PTDEIFIGE-------LSLSRWVNDLL 934 (1007)
Q Consensus 885 PE~~~~~~--------------------~--~~~~DvwS~Gvil~elltG~~-p~~~~~~~~-------~~l~~~~~~~~ 934 (1007)
||.+.... | ..+.||||+||++|||++|.. |+.....-. ..+..|.....
T Consensus 379 PE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~ 458 (507)
T PLN03224 379 PEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKG 458 (507)
T ss_pred hhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcc
Confidence 99875432 1 235799999999999999975 665321111 11112211000
Q ss_pred CccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCC---CCCCCHHHHHHH
Q 001838 935 PISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESP---GKRINAREIVTG 988 (1007)
Q Consensus 935 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p---~~Rpt~~evl~~ 988 (1007)
....+...........+++.+++..+| .+|+|++|++++
T Consensus 459 ---------------~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H 500 (507)
T PLN03224 459 ---------------QKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSH 500 (507)
T ss_pred ---------------cCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence 000011111224568899999999766 689999999875
No 398
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=1e-26 Score=234.93 Aligned_cols=236 Identities=19% Similarity=0.292 Sum_probs=184.7
Q ss_pred cccccccceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhc-CCCceeEEEEEEecCCeeEE
Q 001838 725 TDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRI-RHRNLVKIISACSNDDFKAL 799 (1007)
Q Consensus 725 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~l 799 (1007)
.++|+..++||+|+|++|..++++ +.+.+|+|++++.- .+..+..+.|-.+..+. +||.+|.+..+|..+...++
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 357888999999999999999865 67889999998653 34456677888888877 59999999999999999999
Q ss_pred EEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCC
Q 001838 800 IMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQ 867 (1007)
Q Consensus 800 v~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~ 867 (1007)
|.||++||+|--++.+++ .++++.+..+..+|.-||.|| |+.+|+.||++ |++|+|.++.--.+
T Consensus 329 vieyv~ggdlmfhmqrqr-klpeeharfys~ei~lal~fl---h~rgiiyrdlkldnvlldaeghikltdygmcke~l~~ 404 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEICLALNFL---HERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGP 404 (593)
T ss_pred EEEEecCcceeeehhhhh-cCcHHHhhhhhHHHHHHHHHH---hhcCeeeeeccccceEEccCCceeecccchhhcCCCC
Confidence 999999999988887654 488888888999999999999 78999999775 89999999864322
Q ss_pred CcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCcccc--CcchHHHHHHhhcCccHHHHhhhh
Q 001838 868 DQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFI--GELSLSRWVNDLLPISVMEVIDTN 945 (1007)
Q Consensus 868 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~--~~~~l~~~~~~~~~~~~~~~~d~~ 945 (1007)
...+++.+||+.|+|||.+.+..|...+|+|++||+++||+.|+.||+-... .+.+..++.-+. ++..+
T Consensus 405 --gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqv-------ilekq 475 (593)
T KOG0695|consen 405 --GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQV-------ILEKQ 475 (593)
T ss_pred --CcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHH-------Hhhhc
Confidence 2334678999999999999999999999999999999999999999984321 222222222111 11111
Q ss_pred hccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 001838 946 LLSGEERYFAAKEQSLLSILNLATECTIESPGKRIN 981 (1007)
Q Consensus 946 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt 981 (1007)
+. .+...+.+...+++.-+..||.+|..
T Consensus 476 ir--------iprslsvkas~vlkgflnkdp~erlg 503 (593)
T KOG0695|consen 476 IR--------IPRSLSVKASHVLKGFLNKDPKERLG 503 (593)
T ss_pred cc--------ccceeehhhHHHHHHhhcCCcHHhcC
Confidence 11 12223445677788889999999864
No 399
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.93 E-value=3e-27 Score=266.88 Aligned_cols=233 Identities=24% Similarity=0.365 Sum_probs=178.5
Q ss_pred ccccceecccCce-EEEEEEEcCCceEEEEEechhhHHHHHHHHHHHHHHHhcC-CCceeEEEEEEecCCeeEEEEEecC
Q 001838 728 FSKNNLLGIGSFG-SVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIR-HRNLVKIISACSNDDFKALIMEYMP 805 (1007)
Q Consensus 728 ~~~~~~ig~G~~g-~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~E~~~ 805 (1007)
|...+++|.|+-| .||+|.+. |++||||++-... .....+|+..|+.-+ |||||++++.-.++.+.||+.|.|.
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~ 586 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVYE-GREVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA 586 (903)
T ss_pred eccHHHcccCCCCcEEEEEeeC-CceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh
Confidence 4556788999888 57999986 8999999986543 345678999999884 9999999999999999999999997
Q ss_pred CCChhHhhhcCCC---CCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc-----------------ccceeecceecC
Q 001838 806 NGSLENRLYSGTC---MLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA-----------------HISDFSIAKFLN 865 (1007)
Q Consensus 806 ~gsL~~~l~~~~~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~-----------------kl~DFGla~~~~ 865 (1007)
. +|++++..... .......+.+..|++.||++| |+-+|||||++ +|+|||++|.+.
T Consensus 587 ~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHL---Hsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~ 662 (903)
T KOG1027|consen 587 C-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHL---HSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLA 662 (903)
T ss_pred h-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHH---HhcccccccCCCceEEEEccCCCcceeEEecccccccccC
Confidence 5 99999986411 111134567889999999999 67899999763 799999999987
Q ss_pred CCCc-ccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhC-CCCCCccccCcchHHHHHHhhcCccHHHHhh
Q 001838 866 GQDQ-LSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTG-KKPTDEIFIGELSLSRWVNDLLPISVMEVID 943 (1007)
Q Consensus 866 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG-~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d 943 (1007)
.+.. ........||-||+|||.+....-+.++||+|+|||+|+.++| ..||.+....+.++.. .. ..+.
T Consensus 663 ~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~---~~--~~L~---- 733 (903)
T KOG1027|consen 663 GGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILT---GN--YTLV---- 733 (903)
T ss_pred CCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhc---Cc--ccee----
Confidence 5433 2334567899999999999988888899999999999999986 9999864332222111 00 0000
Q ss_pred hhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 944 TNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 944 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
.+ ...+++ ++.+|+.+|+.++|..||+|.+|+.+
T Consensus 734 -~L--------~~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~H 767 (903)
T KOG1027|consen 734 -HL--------EPLPDC--EAKDLISRMLNPDPQLRPSATDVLNH 767 (903)
T ss_pred -ee--------ccCchH--HHHHHHHHhcCCCcccCCCHHHHhCC
Confidence 00 000111 68899999999999999999999865
No 400
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.93 E-value=1.8e-25 Score=238.55 Aligned_cols=226 Identities=29% Similarity=0.379 Sum_probs=177.9
Q ss_pred CceEEEEEEEc-CCceEEEEEechhhHHH-HHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecCCCChhHhhhc
Q 001838 738 SFGSVYVARLQ-DGMEVAVKVFHQRYERA-LKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYS 815 (1007)
Q Consensus 738 ~~g~Vy~~~~~-~g~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~ 815 (1007)
+||.||+|... +|+.||+|++....... .+.+.+|++.+++++|+||+++++++......++||||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999987 48999999997654333 57899999999999999999999999999999999999999999999876
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCcccccccccCCcccc
Q 001838 816 GTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLSMQTQTLATIGYM 883 (1007)
Q Consensus 816 ~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~ 883 (1007)
... +++..+..++.++++++.||| ..+++|+++ .+++|||.+....... ......++..|+
T Consensus 81 ~~~-~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~~~ 153 (244)
T smart00220 81 RGR-LSEDEARFYARQILSALEYLH---SNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG---LLTTFVGTPEYM 153 (244)
T ss_pred ccC-CCHHHHHHHHHHHHHHHHHHH---HcCeecCCcCHHHeEECCCCcEEEccccceeeecccc---ccccccCCcCCC
Confidence 543 788999999999999999994 568999865 4799999999875432 123456888999
Q ss_pred cccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhhHHHHHHHHHH
Q 001838 884 APEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYFAAKEQSLLS 963 (1007)
Q Consensus 884 aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 963 (1007)
|||......++.++||||||+++||+++|..||.... ......++....... ... .......+
T Consensus 154 ~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~-~~~~~~~~~~~~~~~------------~~~----~~~~~~~~ 216 (244)
T smart00220 154 APEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDD-QLLELFKKIGKPKPP------------FPP----PEWKISPE 216 (244)
T ss_pred CHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-cHHHHHHHHhccCCC------------Ccc----ccccCCHH
Confidence 9999888889999999999999999999999987521 111111111110000 000 00002346
Q ss_pred HHHHHhhcCCCCCCCCCCHHHHHH
Q 001838 964 ILNLATECTIESPGKRINAREIVT 987 (1007)
Q Consensus 964 ~~~l~~~cl~~~p~~Rpt~~evl~ 987 (1007)
+.+++.+|+..+|++||++.++++
T Consensus 217 ~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 217 AKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHHHHHHHccCCchhccCHHHHhh
Confidence 889999999999999999999986
No 401
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.93 E-value=1.9e-27 Score=246.65 Aligned_cols=435 Identities=22% Similarity=0.275 Sum_probs=265.4
Q ss_pred CCcccCcccccCCCCCCEEEcCCCCCCCCCCccccCcccCcEEeccCcccCCcchhhhhhcCCCCee-cccCcccCCCCc
Q 001838 79 NLQGTIPPQLGNLSSLETLDLSHNKLSGNIPSSIFNMHTLKLLDFRDNQLFGSLSSFIFNMSSMLGI-DLSINRFSGELP 157 (1007)
Q Consensus 79 ~l~~~~~~~l~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L-dLs~N~l~~~ip 157 (1007)
+++ .+|..+. ..-..++|..|.|+.+.|.+|+.+++|+.||||+|+|+.+-|++|.++.+|..| ++++|+|+ .+|
T Consensus 57 GL~-eVP~~LP--~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~-~l~ 132 (498)
T KOG4237|consen 57 GLT-EVPANLP--PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKIT-DLP 132 (498)
T ss_pred Ccc-cCcccCC--CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchh-hhh
Confidence 344 4565554 256789999999999999999999999999999999999999999999998777 45559998 899
Q ss_pred hhHhhcCCCCcEEEccCccccccCCccccCCCCCcEEEcccccCCCCCCcccccccccceEEcccCcCCCCCCcccCCcc
Q 001838 158 ANICKNLPNLKKLLLGRNMFHGKIPSTLSKCKQLEGLYLRFNNLSGAIPKEIGNLTKLKDIILNDNELRGEIPQEMGNLP 237 (1007)
Q Consensus 158 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 237 (1007)
.+.|.+|..|+.|.+.-|++.-+..++|..+++|..|.|..|.+..+--.+|..+..++++.+..|.+- ..++++
T Consensus 133 k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~i-----cdCnL~ 207 (498)
T KOG4237|consen 133 KGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFI-----CDCNLP 207 (498)
T ss_pred hhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccc-----cccccc
Confidence 999999999999999999999888889999999999999999998544458888999999998888754 245555
Q ss_pred ccceeeccCccccccccccccCCCCCCeEEcccccccCcCCchhhcCCCCCcEEeccCCCCCCCCCc-cccccCCCCEEE
Q 001838 238 YLVRLTLATNNLVGVVPFTIFNMSTLKKLSLLENTLWGSLPSRIDLSLPNVEFLNLGTNRFSGNIPS-SITNASKLTVFQ 316 (1007)
Q Consensus 238 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~ 316 (1007)
.+... +.. .|..++......-..+.++++...-+..+...+..+..-..+....-+.-|. .|..+++|+.|+
T Consensus 208 wla~~-~a~------~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~ln 280 (498)
T KOG4237|consen 208 WLADD-LAM------NPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLN 280 (498)
T ss_pred hhhhH-Hhh------chhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEec
Confidence 55432 222 2333444444444555555552222222222222221111222222233333 256666777777
Q ss_pred ecCCCcCCCCCcccccccccccccccccccccCCCCccccccccccccccEEEccCCCCCCCCCCCccccccccceeeec
Q 001838 317 LRGNSFSGFIPNTIGNLRNLEFLNIADNYLTSSTPELSFLSSLTNCQKIRVLILAGNPLDGILPSSIGNLSISLERFQMF 396 (1007)
Q Consensus 317 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~l~~L~l~ 396 (1007)
|++|+++++-+.+|.++..+++|+|..|+|....
T Consensus 281 lsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~---------------------------------------------- 314 (498)
T KOG4237|consen 281 LSNNKITRIEDGAFEGAAELQELYLTRNKLEFVS---------------------------------------------- 314 (498)
T ss_pred cCCCccchhhhhhhcchhhhhhhhcCcchHHHHH----------------------------------------------
Confidence 7777777666666666666666666666654311
Q ss_pred cccccccCChhhhccCCCcEEEccCCeeccccchhhhhccccCccccCCCccCCCCc-hhhhcccccceeecccccccCC
Q 001838 397 NCRISGKIPQVISNLSNLLLLDLGGNKLTGSIPVTFSRLLNLQGLGLAFNKLARSIP-DEICHLAKLDKLILHGNKFSGA 475 (1007)
Q Consensus 397 ~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~ 475 (1007)
...|.+++.|+.|+|.+|+|+...|.+|..+.+|..|+|-.|.+---.- .++.. .|..+.-. .
T Consensus 315 --------~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~~-------Wlr~~~~~-~ 378 (498)
T KOG4237|consen 315 --------SGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAWLGE-------WLRKKSVV-G 378 (498)
T ss_pred --------HHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccchHHHHH-------HHhhCCCC-C
Confidence 1245667777778888888887778888888888888877776631100 11111 12223311 2
Q ss_pred CCCCCCCcccCceeecCCcccc---cCCCcccccccccccccCCCCCcCCCCccccccccccce-EeCccccCCCCcccc
Q 001838 476 IPSCSGNLTSLRALYLGSNRFT---SALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIE-LNLSRNNLSGDIPIT 551 (1007)
Q Consensus 476 ~p~~~~~l~~L~~L~Ls~N~l~---~~~p~~~~~l~~L~~Ldls~N~l~~~~~~~~~~l~~L~~-L~Ls~N~l~~~~p~~ 551 (1007)
.|.+- .-..++.+.++.+.+. ...|+...-. -++.-|... +.+.+ ...|++.++ .+|..
T Consensus 379 ~~~Cq-~p~~~~~~~~~dv~~~~~~c~~~ee~~~~------------~s~~cP~~c---~c~~tVvRcSnk~lk-~lp~~ 441 (498)
T KOG4237|consen 379 NPRCQ-SPGFVRQIPISDVAFGDFRCGGPEELGCL------------TSSPCPPPC---TCLDTVVRCSNKLLK-LLPRG 441 (498)
T ss_pred CCCCC-CCchhccccchhccccccccCCccccCCC------------CCCCCCCCc---chhhhhHhhcccchh-hcCCC
Confidence 22221 1112333444443332 1122211100 011112111 11111 223344443 34433
Q ss_pred ccCCCCccEEeccccccccccCccCcCCCCCCEEECCCCcccccCCcchhhhcCCCeeeCcCC
Q 001838 552 IGGLKNLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNKISGVIPTSLEKLLYLKKLNLSFN 614 (1007)
Q Consensus 552 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~ls~N 614 (1007)
+. ..-+.|+|.+|.++ .+|.. .+.+| .+|+|+|+|+..--..|.++++|.+|-+|+|
T Consensus 442 iP--~d~telyl~gn~~~-~vp~~--~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 442 IP--VDVTELYLDGNAIT-SVPDE--LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred CC--chhHHHhcccchhc-ccCHH--HHhhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 32 23456677777776 45555 45566 7777777777666667777777777777776
No 402
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=9e-27 Score=247.83 Aligned_cols=236 Identities=20% Similarity=0.300 Sum_probs=186.2
Q ss_pred cccccceecccCceEEEEEEEcC-CceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEE
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIME 802 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~~-g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E 802 (1007)
++..+..+|-||||.|=...... ...+|+|++++.. .+..+....|-.+|...+.|.||++|-.|.+....|+.||
T Consensus 421 dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmE 500 (732)
T KOG0614|consen 421 DLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLME 500 (732)
T ss_pred hhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHH
Confidence 34556779999999999888654 3358999887653 3455778899999999999999999999999999999999
Q ss_pred ecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcc
Q 001838 803 YMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQL 870 (1007)
Q Consensus 803 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~ 870 (1007)
-|-||.++..|++++ .++......++..+.+|++|| |+++||.||++ |+.|||+||.+......
T Consensus 501 aClGGElWTiLrdRg-~Fdd~tarF~~acv~EAfeYL---H~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~KT 576 (732)
T KOG0614|consen 501 ACLGGELWTILRDRG-SFDDYTARFYVACVLEAFEYL---HRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRKT 576 (732)
T ss_pred hhcCchhhhhhhhcC-CcccchhhhhHHHHHHHHHHH---HhcCceeccCChhheeeccCCceEEeehhhHHHhccCCce
Confidence 999999999998765 477777778899999999999 78899999875 99999999998654332
Q ss_pred cccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccch
Q 001838 871 SMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGE 950 (1007)
Q Consensus 871 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~ 950 (1007)
-+.+||+.|.|||++....++..+|.||+|+++|||++|.+||..... +..... +..-+|.
T Consensus 577 ---wTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dp--mktYn~--------ILkGid~------ 637 (732)
T KOG0614|consen 577 ---WTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDP--MKTYNL--------ILKGIDK------ 637 (732)
T ss_pred ---eeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCch--HHHHHH--------HHhhhhh------
Confidence 357899999999999999999999999999999999999999986321 111110 0111111
Q ss_pred hhhHHHHHHHHHHHHHHHhhcCCCCCCCCCC-----HHHHHHH
Q 001838 951 ERYFAAKEQSLLSILNLATECTIESPGKRIN-----AREIVTG 988 (1007)
Q Consensus 951 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt-----~~evl~~ 988 (1007)
...+........+++++.+..+|.+|.- +.||-++
T Consensus 638 ---i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH 677 (732)
T KOG0614|consen 638 ---IEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKH 677 (732)
T ss_pred ---hhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhh
Confidence 1122334556788999999999999985 5555443
No 403
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.92 E-value=7.4e-25 Score=233.25 Aligned_cols=122 Identities=22% Similarity=0.339 Sum_probs=102.2
Q ss_pred cccccccceecccCceEEEEEEEc-CCceEEEEEechhhHHHHHHHHHHHHHHHhcC-----C---CceeEEEEEEecC-
Q 001838 725 TDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKSFQDECEVMKRIR-----H---RNLVKIISACSND- 794 (1007)
Q Consensus 725 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----H---~niv~l~~~~~~~- 794 (1007)
..+|...++||-|-|++||+|.+. +.+.||+|+.+.. ....+....||++|++++ | .+||+|+++|...
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG 155 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG 155 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence 468999999999999999999865 5789999999864 344577889999999985 3 3699999999764
Q ss_pred ---CeeEEEEEecCCCChhHhhhc-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceec
Q 001838 795 ---DFKALIMEYMPNGSLENRLYS-GTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHY 850 (1007)
Q Consensus 795 ---~~~~lv~E~~~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~ 850 (1007)
.+.+||+|+. |-+|..++.. ....++...+.+|+.||+.||.||| ...+|||.
T Consensus 156 pNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH--~ecgIIHT 212 (590)
T KOG1290|consen 156 PNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLH--RECGIIHT 212 (590)
T ss_pred CCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHH--HhcCcccc
Confidence 4899999998 5588888864 3456899999999999999999999 55688995
No 404
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.92 E-value=1.9e-25 Score=212.27 Aligned_cols=189 Identities=26% Similarity=0.270 Sum_probs=154.4
Q ss_pred ccccccceecccCceEEEEEEEc-CCceEEEEEechhh-HHHHHHHHHHHHHHHhc-CCCceeEEEEEEecCCeeEEEEE
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY-ERALKSFQDECEVMKRI-RHRNLVKIISACSNDDFKALIME 802 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~E 802 (1007)
+.......||+|+||.|-+-++. +|+..|||++.... .+..++..+|+++..+. ..|.+|+++|.+.+....++.||
T Consensus 46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME 125 (282)
T KOG0984|consen 46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICME 125 (282)
T ss_pred hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHH
Confidence 44455678999999999888754 69999999997553 45557788899887665 69999999999999999999999
Q ss_pred ecCCCChhHhhh---cCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCC
Q 001838 803 YMPNGSLENRLY---SGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQ 867 (1007)
Q Consensus 803 ~~~~gsL~~~l~---~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~ 867 (1007)
.|+. ||+.+.+ ..+..+++.-.=+||..|.+||.||| ....++|||++ |+||||++..+.+.
T Consensus 126 ~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~--~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dS 202 (282)
T KOG0984|consen 126 LMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLH--SKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDS 202 (282)
T ss_pred Hhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHH--HHhhhhhccCCcceEEEccCCcEEEcccccceeehhh
Confidence 9975 7776654 23456888888899999999999998 56689999885 99999999987543
Q ss_pred CcccccccccCCccccccccccc----CCCCchhhHHHHHHHHHHHHhCCCCCCccc
Q 001838 868 DQLSMQTQTLATIGYMAPEYGVQ----GRVSTRGDVYSYGIMLMETFTGKKPTDEIF 920 (1007)
Q Consensus 868 ~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DvwS~Gvil~elltG~~p~~~~~ 920 (1007)
- ..+-..|...|||||.+.. ..|+.|+||||+|+.+.||.+++.||+...
T Consensus 203 i---Akt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~ 256 (282)
T KOG0984|consen 203 I---AKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWG 256 (282)
T ss_pred h---HHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccC
Confidence 2 1233468889999998753 369999999999999999999999998743
No 405
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.92 E-value=2.3e-26 Score=226.59 Aligned_cols=259 Identities=21% Similarity=0.275 Sum_probs=184.0
Q ss_pred cccceecccCceEEEEEEEc-CCceEEEEEechhhH--HHHHHHHHHHHHHHhcCCCceeEEEEEEecCC-----eeEEE
Q 001838 729 SKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYE--RALKSFQDECEVMKRIRHRNLVKIISACSNDD-----FKALI 800 (1007)
Q Consensus 729 ~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-----~~~lv 800 (1007)
+..+.||-|+||+||-.++. +|+.||.|++..... ...+++.+|++++.-++|.|+...++...... +.|+|
T Consensus 56 ~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~ 135 (449)
T KOG0664|consen 56 QPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVL 135 (449)
T ss_pred CCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHH
Confidence 34578999999999999865 799999999875543 34578899999999999999999988776543 57889
Q ss_pred EEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCC
Q 001838 801 MEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQD 868 (1007)
Q Consensus 801 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~ 868 (1007)
.|.|.. +|...+.... .++...+.-+..||++||.|| |+.+|.|||++ ||||||+|+....++
T Consensus 136 TELmQS-DLHKIIVSPQ-~Ls~DHvKVFlYQILRGLKYL---HsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~ 210 (449)
T KOG0664|consen 136 TELMQS-DLHKIIVSPQ-ALTPDHVKVFVYQILRGLKYL---HTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRD 210 (449)
T ss_pred HHHHHh-hhhheeccCC-CCCcchhhhhHHHHHhhhHHH---hhcchhhccCCCccEEeccCceEEecccccccccchhh
Confidence 999965 8888776544 467777777899999999999 78899999875 999999999765443
Q ss_pred cccccccccCCcccccccccccC-CCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhh-
Q 001838 869 QLSMQTQTLATIGYMAPEYGVQG-RVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNL- 946 (1007)
Q Consensus 869 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~- 946 (1007)
. ...+..+-|.+|+|||.+.+. .|+.++||||.|||+.|++-++.-|+... .....+.+.+......+|.+....
T Consensus 211 ~-~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~--PiqQL~lItdLLGTPs~EaMr~ACE 287 (449)
T KOG0664|consen 211 R-LNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAG--PIEQLQMIIDLLGTPSQEAMKYACE 287 (449)
T ss_pred h-hhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccC--hHHHHHHHHHHhCCCcHHHHHHHhh
Confidence 3 233556678899999998875 49999999999999999998887776421 111222222222211112211111
Q ss_pred ------ccchhhhH--------HHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHH
Q 001838 947 ------LSGEERYF--------AAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKIRDT 995 (1007)
Q Consensus 947 ------~~~~~~~~--------~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~~~ 995 (1007)
.+...+.+ ..+...-.+...+...++..||++|.+..+.+..+..=+.+
T Consensus 288 GAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~R 350 (449)
T KOG0664|consen 288 GAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEGR 350 (449)
T ss_pred hhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccccccc
Confidence 00000000 00001122466777889999999999999998876543333
No 406
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.91 E-value=9.1e-26 Score=248.18 Aligned_cols=243 Identities=23% Similarity=0.310 Sum_probs=187.1
Q ss_pred hcccccccceecccCceEEEEEEEc-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEE
Q 001838 724 ATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIME 802 (1007)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E 802 (1007)
..++|.....+|+|.||.||||+.. .++..|||+++-.......-.+.|+-+++..+|||||.++|.+...+..|++||
T Consensus 13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicME 92 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICME 92 (829)
T ss_pred CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEE
Confidence 3467888999999999999999965 689999999987655555667889999999999999999999999999999999
Q ss_pred ecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcc
Q 001838 803 YMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQL 870 (1007)
Q Consensus 803 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~ 870 (1007)
||.+|+|++..+- ...+++.++-.+.+...+|++|| |+.+-+|||++ |++|||.+..+... .
T Consensus 93 ycgggslQdiy~~-TgplselqiayvcRetl~gl~yl---hs~gk~hRdiKGanilltd~gDvklaDfgvsaqitat--i 166 (829)
T KOG0576|consen 93 YCGGGSLQDIYHV-TGPLSELQIAYVCRETLQGLKYL---HSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITAT--I 166 (829)
T ss_pred ecCCCcccceeee-cccchhHHHHHHHhhhhccchhh---hcCCcccccccccceeecccCceeecccCchhhhhhh--h
Confidence 9999999986654 34588888888999999999999 78888999875 89999998776432 1
Q ss_pred cccccccCCcccccccccc---cCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhc
Q 001838 871 SMQTQTLATIGYMAPEYGV---QGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLL 947 (1007)
Q Consensus 871 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~ 947 (1007)
.......||++|||||+.. .+.|..++|||+.|+...|+-.-++|-.+...... +. .+.. ...++.-.
T Consensus 167 ~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~-l~-LmTk-------S~~qpp~l 237 (829)
T KOG0576|consen 167 AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRA-LF-LMTK-------SGFQPPTL 237 (829)
T ss_pred hhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHH-HH-Hhhc-------cCCCCCcc
Confidence 2234578999999999753 46799999999999999999887877543211100 00 0000 00111000
Q ss_pred cchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 948 SGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 948 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
..+......+.++++.|+..+|++|||+...+++
T Consensus 238 -------kDk~kws~~fh~fvK~altknpKkRptaeklL~h 271 (829)
T KOG0576|consen 238 -------KDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQH 271 (829)
T ss_pred -------cCCccchHHHHHHHHHHhcCCCccCCChhhheec
Confidence 0111224568899999999999999999887653
No 407
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.90 E-value=1.4e-24 Score=229.02 Aligned_cols=257 Identities=21% Similarity=0.276 Sum_probs=191.1
Q ss_pred HhcccccccceecccCceEEEEEEEc----CCceEEEEEechhhHHHHHHHHHHHHHHHhcC-CCceeEEEEEEecCCee
Q 001838 723 QATDRFSKNNLLGIGSFGSVYVARLQ----DGMEVAVKVFHQRYERALKSFQDECEVMKRIR-HRNLVKIISACSNDDFK 797 (1007)
Q Consensus 723 ~~~~~~~~~~~ig~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~ 797 (1007)
...+.|..+++||+|.|++||+|.+. ..+.||+|.+.... ...+..+|+++|..+. |.||+++.+++...+..
T Consensus 33 ~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v 110 (418)
T KOG1167|consen 33 FISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQV 110 (418)
T ss_pred hhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhccCCee
Confidence 34557888999999999999999754 36789999987543 2356889999999996 99999999999999999
Q ss_pred EEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc-------------ccceeecceec
Q 001838 798 ALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA-------------HISDFSIAKFL 864 (1007)
Q Consensus 798 ~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~-------------kl~DFGla~~~ 864 (1007)
.+|+||++.-...+++.. ++..++..+...+..||.|+ |..+|||||++ .|.|||+|...
T Consensus 111 ~ivlp~~~H~~f~~l~~~----l~~~~i~~Yl~~ll~Al~~~---h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~ 183 (418)
T KOG1167|consen 111 AIVLPYFEHDRFRDLYRS----LSLAEIRWYLRNLLKALAHL---HKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRY 183 (418)
T ss_pred EEEecccCccCHHHHHhc----CCHHHHHHHHHHHHHHhhhh---hccCccccCCCccccccccccCCceEEechhHHHH
Confidence 999999999988888865 66788888999999999999 78999999997 59999999721
Q ss_pred CCC-------C-------c-------------------c---------cccccccCCcccccccccccCC-CCchhhHHH
Q 001838 865 NGQ-------D-------Q-------------------L---------SMQTQTLATIGYMAPEYGVQGR-VSTRGDVYS 901 (1007)
Q Consensus 865 ~~~-------~-------~-------------------~---------~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwS 901 (1007)
... . . + .......||+||.|||++...+ -++++||||
T Consensus 184 d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws 263 (418)
T KOG1167|consen 184 DGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWS 263 (418)
T ss_pred HhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceee
Confidence 100 0 0 0 0001236999999999987754 688999999
Q ss_pred HHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHH---------------------hhh-------hhccchh--
Q 001838 902 YGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEV---------------------IDT-------NLLSGEE-- 951 (1007)
Q Consensus 902 ~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~---------------------~d~-------~~~~~~~-- 951 (1007)
.|||++-+++++.||.....+-..+.+.+....+..+... ... .+....+
T Consensus 264 ~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n 343 (418)
T KOG1167|consen 264 AGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPN 343 (418)
T ss_pred ccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccc
Confidence 9999999999999998766665555554433222111110 000 0000000
Q ss_pred -hhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 952 -RYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 952 -~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
......+..+..+++++.+|+..||.+|.|++|++++
T Consensus 344 ~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkH 381 (418)
T KOG1167|consen 344 TEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKH 381 (418)
T ss_pred eeeccccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence 0011111223368999999999999999999999875
No 408
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.90 E-value=1.4e-24 Score=220.35 Aligned_cols=249 Identities=22% Similarity=0.271 Sum_probs=185.2
Q ss_pred cccccccceecccCceEEEEEEEc-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCC------
Q 001838 725 TDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY--ERALKSFQDECEVMKRIRHRNLVKIISACSNDD------ 795 (1007)
Q Consensus 725 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------ 795 (1007)
..+|.....+|.|+- .|..|.+. .++.||+|++.... ....++..+|..++..+.|+||++++.+|....
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 356777888999988 66666544 58999999886543 233467789999999999999999999997543
Q ss_pred eeEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeeccee
Q 001838 796 FKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKF 863 (1007)
Q Consensus 796 ~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~ 863 (1007)
..|+|||||. ++|.+.+.- .++-.....|..|++.|++|| |+.+|+|||++ ||.|||+|+.
T Consensus 95 e~y~v~e~m~-~nl~~vi~~---elDH~tis~i~yq~~~~ik~l---hs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~ 167 (369)
T KOG0665|consen 95 EVYLVMELMD-ANLCQVILM---ELDHETISYILYQMLCGIKHL---HSAGIIHRDLKPSNIVVNSDCTLKILDFGLART 167 (369)
T ss_pred hHHHHHHhhh-hHHHHHHHH---hcchHHHHHHHHHHHHHHHHH---HhcceeecccCcccceecchhheeeccchhhcc
Confidence 5799999996 489888873 367778888999999999999 78999999764 9999999986
Q ss_pred cCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhc-----CccH
Q 001838 864 LNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLL-----PISV 938 (1007)
Q Consensus 864 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~-----~~~~ 938 (1007)
.... -+.+..+.|..|.|||++.+..|.+.+||||.||++.||++|+.-|. ++..+.+|.+... ..+.
T Consensus 168 e~~~---~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~----g~d~idQ~~ki~~~lgtpd~~F 240 (369)
T KOG0665|consen 168 EDTD---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFP----GKDHIDQWNKIIEQLGTPDPSF 240 (369)
T ss_pred cCcc---cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEec----CchHHHHHHHHHHHhcCCCHHH
Confidence 5322 24567789999999999999889999999999999999999998776 3455566643221 1122
Q ss_pred HHHhhhhhcc-----------chhh---------hHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 939 MEVIDTNLLS-----------GEER---------YFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 939 ~~~~d~~~~~-----------~~~~---------~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
++.+.+.... ...+ .....+-....+.+++.+||..+|++|.++++++++
T Consensus 241 ~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 241 MKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred HHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 2222211100 0000 000011123457899999999999999999999875
No 409
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.90 E-value=3.6e-24 Score=233.09 Aligned_cols=211 Identities=21% Similarity=0.343 Sum_probs=167.8
Q ss_pred ccHHHHHHh---cccccccceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeEEE
Q 001838 716 FSYHELLQA---TDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKII 788 (1007)
Q Consensus 716 ~~~~~~~~~---~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~ 788 (1007)
-.|-++++| ..-|..++.||-|+||+|.+++.. +...+|.|.+++.+ .........|-+||.....+=||+||
T Consensus 616 SnYiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLy 695 (1034)
T KOG0608|consen 616 SNYIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLY 695 (1034)
T ss_pred hhHHHHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEE
Confidence 445555554 234777899999999999999744 57789999998765 23445677899999999999999999
Q ss_pred EEEecCCeeEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccc
Q 001838 789 SACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HIS 856 (1007)
Q Consensus 789 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~ 856 (1007)
..|.+.+.+|+||||++||++-.+|-+-+ .+++..+..++.++..|+++. |..++||||++ |++
T Consensus 696 ySFQDkdnLYFVMdYIPGGDmMSLLIrmg-IFeE~LARFYIAEltcAiesV---HkmGFIHRDiKPDNILIDrdGHIKLT 771 (1034)
T KOG0608|consen 696 YSFQDKDNLYFVMDYIPGGDMMSLLIRMG-IFEEDLARFYIAELTCAIESV---HKMGFIHRDIKPDNILIDRDGHIKLT 771 (1034)
T ss_pred EEeccCCceEEEEeccCCccHHHHHHHhc-cCHHHHHHHHHHHHHHHHHHH---HhccceecccCccceEEccCCceeee
Confidence 99999999999999999999999886643 477777777888999999999 79999999886 899
Q ss_pred eeecceecC---------CCC---cc----------------------------cccccccCCcccccccccccCCCCch
Q 001838 857 DFSIAKFLN---------GQD---QL----------------------------SMQTQTLATIGYMAPEYGVQGRVSTR 896 (1007)
Q Consensus 857 DFGla~~~~---------~~~---~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~ 896 (1007)
|||++.-+. ..+ +. ......+||+.|+|||++....|+.-
T Consensus 772 DFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~ 851 (1034)
T KOG0608|consen 772 DFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQL 851 (1034)
T ss_pred eccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCcccc
Confidence 999985321 000 00 00113479999999999999999999
Q ss_pred hhHHHHHHHHHHHHhCCCCCCccccCc--chHHHHH
Q 001838 897 GDVYSYGIMLMETFTGKKPTDEIFIGE--LSLSRWV 930 (1007)
Q Consensus 897 ~DvwS~Gvil~elltG~~p~~~~~~~~--~~l~~~~ 930 (1007)
+|+||.|||||||+.|++||......+ ..+..|.
T Consensus 852 cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~ 887 (1034)
T KOG0608|consen 852 CDWWSVGVILYEMLVGQPPFLADTPGETQYKVINWR 887 (1034)
T ss_pred chhhHhhHHHHHHhhCCCCccCCCCCcceeeeeehh
Confidence 999999999999999999998655443 2334453
No 410
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.90 E-value=1.1e-22 Score=260.88 Aligned_cols=325 Identities=22% Similarity=0.274 Sum_probs=178.7
Q ss_pred CCchhHhhcCCCCcEEEccCccccccCCccccCCCCCcEEEcccccCCCCCCcccccccccceEEcccCcCCCCCCcccC
Q 001838 155 ELPANICKNLPNLKKLLLGRNMFHGKIPSTLSKCKQLEGLYLRFNNLSGAIPKEIGNLTKLKDIILNDNELRGEIPQEMG 234 (1007)
Q Consensus 155 ~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 234 (1007)
.+|.++..-.++|+.|++.+|.++ .+|..| ...+|++|+|.+|++. .+|..+..+++|+.|+|+++.....+|. ++
T Consensus 579 ~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls 654 (1153)
T PLN03210 579 HLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-LS 654 (1153)
T ss_pred ecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCc-cc
Confidence 455554322235777777777775 566666 4577777777777776 4666677777777777777654445553 67
Q ss_pred CccccceeeccCccccccccccccCCCCCCeEEcccccccCcCCchhhcCCCCCcEEeccCCCCCCCCCccccccCCCCE
Q 001838 235 NLPYLVRLTLATNNLVGVVPFTIFNMSTLKKLSLLENTLWGSLPSRIDLSLPNVEFLNLGTNRFSGNIPSSITNASKLTV 314 (1007)
Q Consensus 235 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 314 (1007)
.+++|+.|+|++|.....+|..+.++++|+.|++++|...+.+|..+ .+++|+.|++++|...+.+|.. ..+|+.
T Consensus 655 ~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i--~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~ 729 (1153)
T PLN03210 655 MATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI--NLKSLYRLNLSGCSRLKSFPDI---STNISW 729 (1153)
T ss_pred cCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC--CCCCCCEEeCCCCCCccccccc---cCCcCe
Confidence 77777888887776666677777777777777777765556666654 5677777777777655555532 346777
Q ss_pred EEecCCCcCCCCCcccccccccccccccccccccCCCCccccccccccccccEEEccCCCCCCCCCCCccccccccceee
Q 001838 315 FQLRGNSFSGFIPNTIGNLRNLEFLNIADNYLTSSTPELSFLSSLTNCQKIRVLILAGNPLDGILPSSIGNLSISLERFQ 394 (1007)
Q Consensus 315 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~l~~L~ 394 (1007)
|++++|.+.. +|..+ .+++|+.|++.++....... .+.. ++........+|+.|+
T Consensus 730 L~L~~n~i~~-lP~~~-~l~~L~~L~l~~~~~~~l~~----------------------~~~~-l~~~~~~~~~sL~~L~ 784 (1153)
T PLN03210 730 LDLDETAIEE-FPSNL-RLENLDELILCEMKSEKLWE----------------------RVQP-LTPLMTMLSPSLTRLF 784 (1153)
T ss_pred eecCCCcccc-ccccc-cccccccccccccchhhccc----------------------cccc-cchhhhhccccchhee
Confidence 7777777763 44443 45666666665433211100 0000 0000001112344444
Q ss_pred eccccccccCChhhhccCCCcEEEccCCeeccccchhhhhccccCccccCCCccCCCCchhhhcccccceeecccccccC
Q 001838 395 MFNCRISGKIPQVISNLSNLLLLDLGGNKLTGSIPVTFSRLLNLQGLGLAFNKLARSIPDEICHLAKLDKLILHGNKFSG 474 (1007)
Q Consensus 395 l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 474 (1007)
+++|...+.+|..++++++|+.|+|++|..-+.+|..+ . +++|+.|+|++|....
T Consensus 785 Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~------------------------L~sL~~L~Ls~c~~L~ 839 (1153)
T PLN03210 785 LSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-N------------------------LESLESLDLSGCSRLR 839 (1153)
T ss_pred CCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-C------------------------ccccCEEECCCCCccc
Confidence 44444444455555555555555555443222333332 3 4444444444443322
Q ss_pred CCCCCCCCcccCceeecCCcccccCCCcccccccccccccCCCCCcCCCCccccccccccceEeCccc
Q 001838 475 AIPSCSGNLTSLRALYLGSNRFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRN 542 (1007)
Q Consensus 475 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~Ldls~N~l~~~~~~~~~~l~~L~~L~Ls~N 542 (1007)
.+|.. .++|+.|+|++|.++ .+|..+..+++|++|++++++--..+|..+..++.|+.++++++
T Consensus 840 ~~p~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C 903 (1153)
T PLN03210 840 TFPDI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDC 903 (1153)
T ss_pred ccccc---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecCCC
Confidence 33321 234455555555554 24445555555555555542222224445555566666666554
No 411
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.90 E-value=2.5e-24 Score=233.02 Aligned_cols=185 Identities=22% Similarity=0.331 Sum_probs=155.4
Q ss_pred ccccccceecccCceEEEEEEEcC-CceEEEEEechhhH--------HHHHHHHHHHHHHHhcC---CCceeEEEEEEec
Q 001838 726 DRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYE--------RALKSFQDECEVMKRIR---HRNLVKIISACSN 793 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~~~~-g~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~ 793 (1007)
.+|...+.+|+|+||.|+.|.++. ..+|+||.+.+..- +..-..-.|+.||..++ |+||++++++|++
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 458889999999999999999774 67899998876531 11112456999999997 9999999999999
Q ss_pred CCeeEEEEEec-CCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeec
Q 001838 794 DDFKALIMEYM-PNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSI 860 (1007)
Q Consensus 794 ~~~~~lv~E~~-~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGl 860 (1007)
++.+||+||-- ++-+|++++..+.. +++..+.-|++||+.|+++| |+.+|||||++ |++|||-
T Consensus 641 dd~yyl~te~hg~gIDLFd~IE~kp~-m~E~eAk~IFkQV~agi~hl---h~~~ivhrdikdenvivd~~g~~klidfgs 716 (772)
T KOG1152|consen 641 DDYYYLETEVHGEGIDLFDFIEFKPR-MDEPEAKLIFKQVVAGIKHL---HDQGIVHRDIKDENVIVDSNGFVKLIDFGS 716 (772)
T ss_pred CCeeEEEecCCCCCcchhhhhhccCc-cchHHHHHHHHHHHhccccc---cccCceecccccccEEEecCCeEEEeeccc
Confidence 99999999975 56789999987654 78888889999999999999 89999999875 8999999
Q ss_pred ceecCCCCcccccccccCCcccccccccccCCC-CchhhHHHHHHHHHHHHhCCCCCCc
Q 001838 861 AKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRV-STRGDVYSYGIMLMETFTGKKPTDE 918 (1007)
Q Consensus 861 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwS~Gvil~elltG~~p~~~ 918 (1007)
|.......- ...+||..|.|||++.+.+| ...-|||++||+||.++..+.||..
T Consensus 717 aa~~ksgpf----d~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 717 AAYTKSGPF----DVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred hhhhcCCCc----ceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 987654322 34679999999999998887 5668999999999999999999864
No 412
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.90 E-value=3.5e-24 Score=211.69 Aligned_cols=244 Identities=18% Similarity=0.249 Sum_probs=184.7
Q ss_pred cccccccceecccCceEEEEEEEc-CCceEEEEEechhhHHHHHHHHHHHHHHHhc-CCCceeEEEE-EEecCCeeEEEE
Q 001838 725 TDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRYERALKSFQDECEVMKRI-RHRNLVKIIS-ACSNDDFKALIM 801 (1007)
Q Consensus 725 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~-~~~~~~~~~lv~ 801 (1007)
.+.|.+.+.+|+|.||.+-.|+++ ..+.+|+|.+..... ..++|.+|..---.+ .|.||+.-++ .|...+..++++
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~t-t~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~q 101 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQT-TQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQ 101 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchh-hHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEee
Confidence 457889999999999999999987 477899999876532 347788888766566 4999998876 577788889999
Q ss_pred EecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc--------------ccceeecceecCCC
Q 001838 802 EYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA--------------HISDFSIAKFLNGQ 867 (1007)
Q Consensus 802 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~--------------kl~DFGla~~~~~~ 867 (1007)
||++.|+|.+-+... .+.+....+++.|++.|++|| |++.+||||++ |+||||..+.....
T Consensus 102 E~aP~gdL~snv~~~--GigE~~~K~v~~ql~SAi~fM---HsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~t 176 (378)
T KOG1345|consen 102 EFAPRGDLRSNVEAA--GIGEANTKKVFAQLLSAIEFM---HSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTT 176 (378)
T ss_pred ccCccchhhhhcCcc--cccHHHHHHHHHHHHHHHHHh---hccchhhcccccceEEEecCCccEEEeeecccccccCce
Confidence 999999999887653 367778889999999999999 79999999875 89999998864311
Q ss_pred CcccccccccCCcccccccccccC-----CCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHh
Q 001838 868 DQLSMQTQTLATIGYMAPEYGVQG-----RVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVI 942 (1007)
Q Consensus 868 ~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 942 (1007)
....--+..|.|||..... ...+.+|||.||+++|..+||+.||+.....+....+|.........
T Consensus 177 -----V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~---- 247 (378)
T KOG1345|consen 177 -----VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNP---- 247 (378)
T ss_pred -----ehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCc----
Confidence 1122245568999976532 35778999999999999999999999877777777777654332211
Q ss_pred hhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHH
Q 001838 943 DTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKI 992 (1007)
Q Consensus 943 d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i 992 (1007)
.+.... . .....++++-++-+.++|++|.-..++.++-...
T Consensus 248 --~~P~~F-~------~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~ 288 (378)
T KOG1345|consen 248 --ALPKKF-N------PFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCL 288 (378)
T ss_pred --cCchhh-c------ccCHHHHHHHHHhcCCcccccchhHHHHHHHHHH
Confidence 000000 0 1134577888899999999998777777665443
No 413
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.89 E-value=2e-22 Score=209.80 Aligned_cols=198 Identities=32% Similarity=0.541 Sum_probs=168.4
Q ss_pred ecccCceEEEEEEEcC-CceEEEEEechhhHH-HHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecCCCChhH
Q 001838 734 LGIGSFGSVYVARLQD-GMEVAVKVFHQRYER-ALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLEN 811 (1007)
Q Consensus 734 ig~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~gsL~~ 811 (1007)
||+|++|.||++...+ |+.+++|++...... ..+.+.+|++.+++++|++|+++++++......++||||+++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 6899999999999764 899999999865432 34678999999999999999999999999999999999999999999
Q ss_pred hhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc-------------cccceeecceecCCCCcccccccccC
Q 001838 812 RLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV-------------AHISDFSIAKFLNGQDQLSMQTQTLA 878 (1007)
Q Consensus 812 ~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~-------------~kl~DFGla~~~~~~~~~~~~~~~~g 878 (1007)
++......+++..+..++.++++++.|| |+.+++|+++ .+++|||.+........ ......+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~l---h~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~ 155 (215)
T cd00180 81 LLKENEGKLSEDEILRILLQILEGLEYL---HSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS--LLKTIVG 155 (215)
T ss_pred HHHhccCCCCHHHHHHHHHHHHHHHHHH---HhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc--hhhcccC
Confidence 9986534588999999999999999999 5668999854 37899999987653321 1223457
Q ss_pred CcccccccccccC-CCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhhHHHH
Q 001838 879 TIGYMAPEYGVQG-RVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYFAAK 957 (1007)
Q Consensus 879 t~~y~aPE~~~~~-~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 957 (1007)
...|++||..... .++.+.|+|++|++++++
T Consensus 156 ~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l------------------------------------------------ 187 (215)
T cd00180 156 TPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL------------------------------------------------ 187 (215)
T ss_pred CCCccChhHhcccCCCCchhhhHHHHHHHHHH------------------------------------------------
Confidence 8889999998777 788999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 958 EQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 958 ~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
.++.+++..|++.+|++||++.++++.
T Consensus 188 ----~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 ----PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred ----HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 147788899999999999999999875
No 414
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.89 E-value=3.5e-22 Score=256.18 Aligned_cols=312 Identities=24% Similarity=0.263 Sum_probs=151.0
Q ss_pred cceEEcccCcCCCCCCcccCCccccceeeccCccccccccccccCCCCCCeEEcccccccCcCCchhhcCCCCCcEEecc
Q 001838 215 LKDIILNDNELRGEIPQEMGNLPYLVRLTLATNNLVGVVPFTIFNMSTLKKLSLLENTLWGSLPSRIDLSLPNVEFLNLG 294 (1007)
Q Consensus 215 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~lp~~~~~~l~~L~~L~Ls 294 (1007)
|+.|.+.+|.++ .+|..| ...+|+.|+|++|++.. ++..+..+++|+.|+|+++...+.+|. ...+++|+.|+|+
T Consensus 591 Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~~-L~~~~~~l~~Lk~L~Ls~~~~l~~ip~--ls~l~~Le~L~L~ 665 (1153)
T PLN03210 591 LRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLEK-LWDGVHSLTGLRNIDLRGSKNLKEIPD--LSMATNLETLKLS 665 (1153)
T ss_pred cEEEEecCCCCC-CCCCcC-CccCCcEEECcCccccc-cccccccCCCCCEEECCCCCCcCcCCc--cccCCcccEEEec
Confidence 455555555444 334433 23455555555555442 333444555555555555443344543 2245667777777
Q ss_pred CCCCCCCCCccccccCCCCEEEecCCCcCCCCCcccccccccccccccccccccCCCCccccccccccccccEEEccCCC
Q 001838 295 TNRFSGNIPSSITNASKLTVFQLRGNSFSGFIPNTIGNLRNLEFLNIADNYLTSSTPELSFLSSLTNCQKIRVLILAGNP 374 (1007)
Q Consensus 295 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~ 374 (1007)
+|.....+|..+.++++|+.|++++|..-+.+|..+ ++++|+.|++++|......|. ...+|++|++++|.
T Consensus 666 ~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~--------~~~nL~~L~L~~n~ 736 (1153)
T PLN03210 666 DCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPD--------ISTNISWLDLDETA 736 (1153)
T ss_pred CCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCCEEeCCCCCCcccccc--------ccCCcCeeecCCCc
Confidence 666555677777777777777777754333455433 456666666655532211111 01233344444443
Q ss_pred CCCCCCCCccccccccceeeeccccccccCChhhhccCCCcEEEccCCeeccccchhhhhccccCccccCCCccCCCCch
Q 001838 375 LDGILPSSIGNLSISLERFQMFNCRISGKIPQVISNLSNLLLLDLGGNKLTGSIPVTFSRLLNLQGLGLAFNKLARSIPD 454 (1007)
Q Consensus 375 l~~~~p~~~~~l~~~l~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 454 (1007)
+. .+|..+ .+++|+.|++.++.... ++. .+....|.
T Consensus 737 i~--------------------------~lP~~~-~l~~L~~L~l~~~~~~~-l~~----------------~~~~l~~~ 772 (1153)
T PLN03210 737 IE--------------------------EFPSNL-RLENLDELILCEMKSEK-LWE----------------RVQPLTPL 772 (1153)
T ss_pred cc--------------------------cccccc-cccccccccccccchhh-ccc----------------cccccchh
Confidence 32 122211 23444444444322110 000 00011111
Q ss_pred hhhcccccceeecccccccCCCCCCCCCcccCceeecCCcccccCCCcccccccccccccCCCCCcCCCCcccccccccc
Q 001838 455 EICHLAKLDKLILHGNKFSGAIPSCSGNLTSLRALYLGSNRFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVV 534 (1007)
Q Consensus 455 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~Ldls~N~l~~~~~~~~~~l~~L 534 (1007)
.+...++|+.|+|++|...+.+|..++++++|+.|++++|..-+.+|..+ ++++|+.|++++|.....+|.. .++|
T Consensus 773 ~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL 848 (1153)
T PLN03210 773 MTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNI 848 (1153)
T ss_pred hhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---cccc
Confidence 12223455555555555555555555555555555555543333344333 3444555555544332222221 2345
Q ss_pred ceEeCccccCCCCccccccCCCCccEEeccc-cccccccCccCcCCCCCCEEECCCC
Q 001838 535 IELNLSRNNLSGDIPITIGGLKNLQKLFLAN-NRLEGPIPESFSGLSSLEILDLSKN 590 (1007)
Q Consensus 535 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~LdLs~N 590 (1007)
+.|+|++|.|+ .+|.++..+++|+.|+|++ |+++ .+|..+..+++|+.|+++++
T Consensus 849 ~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~-~l~~~~~~L~~L~~L~l~~C 903 (1153)
T PLN03210 849 SDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQ-RVSLNISKLKHLETVDFSDC 903 (1153)
T ss_pred CEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcC-ccCcccccccCCCeeecCCC
Confidence 56666666665 4566666666666666665 4444 34555556666666666554
No 415
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.89 E-value=1.2e-24 Score=232.39 Aligned_cols=266 Identities=23% Similarity=0.286 Sum_probs=198.0
Q ss_pred ccccccccHHHHHHhcccccccceecccCceEEEEEEEcC-CceEEEEEechhhHHHHHHHHHHHHHHHhcC------CC
Q 001838 710 PQAIRRFSYHELLQATDRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQDECEVMKRIR------HR 782 (1007)
Q Consensus 710 ~~~~~~~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~------H~ 782 (1007)
.++...+.+.|+.. .+|.+....|+|-|++|.+|.... |..||||++.... -..+.=+.|+++|+++. -.
T Consensus 418 aEGYYrv~igE~LD--~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE-~M~KtGl~EleiLkKL~~AD~Edk~ 494 (752)
T KOG0670|consen 418 AEGYYRVRIGELLD--SRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE-VMHKTGLKELEILKKLNDADPEDKF 494 (752)
T ss_pred ccceEEEehhhhhc--ceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch-HHhhhhhHHHHHHHHhhccCchhhh
Confidence 35556666777654 689999999999999999998764 8899999998653 22345578999999995 35
Q ss_pred ceeEEEEEEecCCeeEEEEEecCCCChhHhhhcC--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc-------
Q 001838 783 NLVKIISACSNDDFKALIMEYMPNGSLENRLYSG--TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------- 853 (1007)
Q Consensus 783 niv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~--~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------- 853 (1007)
|+++++-.|...+++|||||-.. -+|.+.|++- ...+....+..|+.|+.-||..| ...+|+|.|++
T Consensus 495 Hclrl~r~F~hknHLClVFE~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklL---K~c~vlHaDIKPDNiLVN 570 (752)
T KOG0670|consen 495 HCLRLFRHFKHKNHLCLVFEPLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLL---KKCGVLHADIKPDNILVN 570 (752)
T ss_pred HHHHHHHHhhhcceeEEEehhhh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHH---HhcCeeecccCccceEec
Confidence 89999999999999999999885 4899999753 34678888999999999999999 78899998775
Q ss_pred ------ccceeecceecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHH
Q 001838 854 ------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLS 927 (1007)
Q Consensus 854 ------kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~ 927 (1007)
||||||-|......+. +.+.-+..|.|||++.+..|+...|+||.||.||||+||+.-|.+.....+- .
T Consensus 571 E~k~iLKLCDfGSA~~~~enei----tPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~ML-r 645 (752)
T KOG0670|consen 571 ESKNILKLCDFGSASFASENEI----TPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQML-R 645 (752)
T ss_pred cCcceeeeccCccccccccccc----cHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHH-H
Confidence 8999999998764432 3344567899999999999999999999999999999999988764332211 0
Q ss_pred HHHH--hhcCc---------------------------------cHHHHhhh------hhccchhhhHHHHHHHHHHHHH
Q 001838 928 RWVN--DLLPI---------------------------------SVMEVIDT------NLLSGEERYFAAKEQSLLSILN 966 (1007)
Q Consensus 928 ~~~~--~~~~~---------------------------------~~~~~~d~------~~~~~~~~~~~~~~~~~~~~~~ 966 (1007)
-++. .-.|. .++..+.| .+.. .+..+........++.+
T Consensus 646 l~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~-~q~~~deq~~~~~~~rd 724 (752)
T KOG0670|consen 646 LFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIA-VQRLPDEQPKIVQQLRD 724 (752)
T ss_pred HHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhc-cCCCCchhHHHHHHHHH
Confidence 0000 00000 00111111 0000 01111122345678999
Q ss_pred HHhhcCCCCCCCCCCHHHHHHH
Q 001838 967 LATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 967 l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
|+..|+..||++|.|..+++++
T Consensus 725 LLdkml~LdP~KRit~nqAL~H 746 (752)
T KOG0670|consen 725 LLDKMLILDPEKRITVNQALKH 746 (752)
T ss_pred HHHHHhccChhhcCCHHHHhcC
Confidence 9999999999999999998864
No 416
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.89 E-value=2.6e-22 Score=211.71 Aligned_cols=187 Identities=29% Similarity=0.433 Sum_probs=158.4
Q ss_pred ccccceecccCceEEEEEEEcC-CceEEEEEechhhHH-HHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecC
Q 001838 728 FSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYER-ALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMP 805 (1007)
Q Consensus 728 ~~~~~~ig~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~ 805 (1007)
|+..+.||+|++|.||+|...+ ++.+|+|.+...... ..+.+.+|++.+++++|+|++++++++......++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 4567889999999999999875 889999999865443 56788999999999999999999999999999999999999
Q ss_pred CCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCccccc
Q 001838 806 NGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLSMQ 873 (1007)
Q Consensus 806 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~~~~~ 873 (1007)
+++|.+++......+++.....++.+++.++.||| ..+++|+++ .+++|||.+......... ..
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~-~~ 156 (225)
T smart00221 81 GGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLH---SLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAA-LL 156 (225)
T ss_pred CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccc-cc
Confidence 99999999765433788999999999999999994 569999865 489999999887543211 11
Q ss_pred ccccCCccccccccc-ccCCCCchhhHHHHHHHHHHHHhCCCCCCc
Q 001838 874 TQTLATIGYMAPEYG-VQGRVSTRGDVYSYGIMLMETFTGKKPTDE 918 (1007)
Q Consensus 874 ~~~~gt~~y~aPE~~-~~~~~~~~~DvwS~Gvil~elltG~~p~~~ 918 (1007)
....++..|++||.. ....++.++|||+||++++||++|+.||+.
T Consensus 157 ~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 157 KTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred cceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 334578889999988 566788899999999999999999999965
No 417
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.89 E-value=2.3e-22 Score=238.42 Aligned_cols=154 Identities=26% Similarity=0.334 Sum_probs=99.4
Q ss_pred EEEEEeCCCCCcccCcccccCCCCCCEEEcCCCCCCCCCCccccCcccCcEEeccCcccCCcchhhhhhcCCCCeecccC
Q 001838 70 VIVLNISGFNLQGTIPPQLGNLSSLETLDLSHNKLSGNIPSSIFNMHTLKLLDFRDNQLFGSLSSFIFNMSSMLGIDLSI 149 (1007)
Q Consensus 70 v~~L~L~~~~l~~~~~~~l~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~ 149 (1007)
-..|||++++|+ .+|+.+. ++|+.|++++|+|+. +|. .+++|++|+|++|+|+..+ . ..++|+.|+|++
T Consensus 203 ~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt~-LP~---lp~~Lk~LdLs~N~LtsLP-~---lp~sL~~L~Ls~ 271 (788)
T PRK15387 203 NAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLTSLP-V---LPPGLLELSIFS 271 (788)
T ss_pred CcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCCC-CCC---CCCCCcEEEecCCccCccc-C---cccccceeeccC
Confidence 346788888888 5777775 478889999998884 554 2578888888888887543 2 235777777877
Q ss_pred cccCCCCchhHhhcCCCCcEEEccCccccccCCccccCCCCCcEEEcccccCCCCCCcccccccccceEEcccCcCCCCC
Q 001838 150 NRFSGELPANICKNLPNLKKLLLGRNMFHGKIPSTLSKCKQLEGLYLRFNNLSGAIPKEIGNLTKLKDIILNDNELRGEI 229 (1007)
Q Consensus 150 N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 229 (1007)
|.++ .+|. ..++|+.|+|++|+|+. +|.. +++|+.|+|++|+|++ +|... .+|+.|++++|+|++ +
T Consensus 272 N~L~-~Lp~----lp~~L~~L~Ls~N~Lt~-LP~~---p~~L~~LdLS~N~L~~-Lp~lp---~~L~~L~Ls~N~L~~-L 337 (788)
T PRK15387 272 NPLT-HLPA----LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPALP---SELCKLWAYNNQLTS-L 337 (788)
T ss_pred Cchh-hhhh----chhhcCEEECcCCcccc-cccc---ccccceeECCCCcccc-CCCCc---ccccccccccCcccc-c
Confidence 7776 4554 23457777777777763 4432 3567777777777764 34322 345566666666663 3
Q ss_pred CcccCCccccceeeccCccccc
Q 001838 230 PQEMGNLPYLVRLTLATNNLVG 251 (1007)
Q Consensus 230 p~~~~~l~~L~~L~Ls~N~l~~ 251 (1007)
|.. ..+|+.|+|++|+|++
T Consensus 338 P~l---p~~Lq~LdLS~N~Ls~ 356 (788)
T PRK15387 338 PTL---PSGLQELSVSDNQLAS 356 (788)
T ss_pred ccc---ccccceEecCCCccCC
Confidence 321 1345566666665554
No 418
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.88 E-value=1.9e-22 Score=239.22 Aligned_cols=162 Identities=28% Similarity=0.382 Sum_probs=83.2
Q ss_pred CCCcEEEccCCeeccccchhhhhccccCccccCCCccCCCCchhhhcccccceeecccccccCCCCCCCCCcccCceeec
Q 001838 412 SNLLLLDLGGNKLTGSIPVTFSRLLNLQGLGLAFNKLARSIPDEICHLAKLDKLILHGNKFSGAIPSCSGNLTSLRALYL 491 (1007)
Q Consensus 412 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 491 (1007)
++|+.|+|++|+|++ +|.. ..+|+.|++++|+|++ +|.. ..+|+.|+|++|+|++ +|.. ..+|+.|++
T Consensus 302 ~~L~~LdLS~N~L~~-Lp~l---p~~L~~L~Ls~N~L~~-LP~l---p~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~L 369 (788)
T PRK15387 302 PGLQELSVSDNQLAS-LPAL---PSELCKLWAYNNQLTS-LPTL---PSGLQELSVSDNQLAS-LPTL---PSELYKLWA 369 (788)
T ss_pred cccceeECCCCcccc-CCCC---cccccccccccCcccc-cccc---ccccceEecCCCccCC-CCCC---Ccccceehh
Confidence 456666666666654 2321 1234555555555543 3321 1345555555555553 3322 123444555
Q ss_pred CCcccccCCCcccccccccccccCCCCCcCCCCccccccccccceEeCccccCCCCccccccCCCCccEEeccccccccc
Q 001838 492 GSNRFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRNNLSGDIPITIGGLKNLQKLFLANNRLEGP 571 (1007)
Q Consensus 492 s~N~l~~~~p~~~~~l~~L~~Ldls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 571 (1007)
++|++++ +|.. ...|+.|+|++|+|++ +|... ++|+.|++++|+|++
T Consensus 370 s~N~L~~-LP~l---------------------------~~~L~~LdLs~N~Lt~-LP~l~---s~L~~LdLS~N~Lss- 416 (788)
T PRK15387 370 YNNRLTS-LPAL---------------------------PSGLKELIVSGNRLTS-LPVLP---SELKELMVSGNRLTS- 416 (788)
T ss_pred hcccccc-Cccc---------------------------ccccceEEecCCcccC-CCCcc---cCCCEEEccCCcCCC-
Confidence 5555543 2321 1235555666666552 44322 356666666666653
Q ss_pred cCccCcCCCCCCEEECCCCcccccCCcchhhhcCCCeeeCcCCccccccCC
Q 001838 572 IPESFSGLSSLEILDLSKNKISGVIPTSLEKLLYLKKLNLSFNKLEGEIPR 622 (1007)
Q Consensus 572 ~p~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~ip~ 622 (1007)
+|..+ .+|+.|++++|+|+ .+|..+.+++.|+.|+|++|+|+|.+|.
T Consensus 417 IP~l~---~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~ 463 (788)
T PRK15387 417 LPMLP---SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQ 463 (788)
T ss_pred CCcch---hhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHH
Confidence 44332 34556666666666 4566666666666666666666665543
No 419
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.87 E-value=1.5e-21 Score=233.43 Aligned_cols=271 Identities=19% Similarity=0.331 Sum_probs=143.0
Q ss_pred CcchHHHHHHHHHhcccCCCCccc---cCCCCCCCCccccc----------------eEeCCCCCcEEEEEeCCCCCccc
Q 001838 23 ITTDQQSLLALKAHISYDPTNLFA---KNWTSSTSVCSWIG----------------ITCGVNSHKVIVLNISGFNLQGT 83 (1007)
Q Consensus 23 ~~~~~~~ll~~k~~~~~~~~~~~~---~~w~~~~~~C~w~g----------------v~c~~~~~~v~~L~L~~~~l~~~ 83 (1007)
..++.+.+++..+.+.+.+ ... ..|...++.|-=.. |.|. ++.|+.+...+......
T Consensus 61 ~~~~~~~~~~~~~~l~~p~--~~~~~~~~~~~~~~fc~~~~~~~~~l~~~~~~~~~tv~~~--~~~vt~l~~~g~~~~~~ 136 (754)
T PRK15370 61 SPEEIKSKFECLRMLAFPA--YADNIQYSRGGADQYCILSENSQEILSIVFNTEGYTVEGG--GKSVTYTRVTESEQASS 136 (754)
T ss_pred CHHHHHHHHHHHHHhcCCc--hhhccccccCCCCcccccCCcchhhheeeecCCceEEecC--CCccccccccccccccc
Confidence 3467788999999886443 222 23998899995433 6674 35677776655322211
Q ss_pred Cc--ccc-------------------------------cCCCCCCEEEcCCCCCCCCCCccccCcccCcEEeccCcccCC
Q 001838 84 IP--PQL-------------------------------GNLSSLETLDLSHNKLSGNIPSSIFNMHTLKLLDFRDNQLFG 130 (1007)
Q Consensus 84 ~~--~~l-------------------------------~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 130 (1007)
.. .+. +-..+...|++++++++. +|..+. +.|+.|+|++|+|+.
T Consensus 137 ~~~~~~~~~~~~~w~~w~~~~~~~~~~~r~~a~~r~~~Cl~~~~~~L~L~~~~Lts-LP~~Ip--~~L~~L~Ls~N~Lts 213 (754)
T PRK15370 137 ASGSKDAVNYELIWSEWVKEAPAKEAANREEAVQRMRDCLKNNKTELRLKILGLTT-IPACIP--EQITTLILDNNELKS 213 (754)
T ss_pred CCCCCChhhHHHHHHHHHhcCCCCccccHHHHHHHHHhhcccCceEEEeCCCCcCc-CCcccc--cCCcEEEecCCCCCc
Confidence 10 000 111345666666666663 454442 356666666666664
Q ss_pred cchhhhhhcCCCCeecccCcccCCCCchhHhhcCCCCcEEEccCccccccCCccccCCCCCcEEEcccccCCCCCCcccc
Q 001838 131 SLSSFIFNMSSMLGIDLSINRFSGELPANICKNLPNLKKLLLGRNMFHGKIPSTLSKCKQLEGLYLRFNNLSGAIPKEIG 210 (1007)
Q Consensus 131 ~~~~~~~~l~~L~~LdLs~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 210 (1007)
.++..+ ++|+.|+|++|+|+ .+|..+. ++|+.|+|++|+++ .+|..+. .+|+.|+|++|+|+ .+|..+.
T Consensus 214 LP~~l~---~nL~~L~Ls~N~Lt-sLP~~l~---~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~ 282 (754)
T PRK15370 214 LPENLQ---GNIKTLYANSNQLT-SIPATLP---DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP 282 (754)
T ss_pred CChhhc---cCCCEEECCCCccc-cCChhhh---ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC
Confidence 433222 35666666666665 4555432 24566666666665 4444433 35566666666655 3444332
Q ss_pred cccccceEEcccCcCCCCCCcccCCccccceeeccCccccccccccccCCCCCCeEEcccccccCcCCchhhcCCCCCcE
Q 001838 211 NLTKLKDIILNDNELRGEIPQEMGNLPYLVRLTLATNNLVGVVPFTIFNMSTLKKLSLLENTLWGSLPSRIDLSLPNVEF 290 (1007)
Q Consensus 211 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~lp~~~~~~l~~L~~ 290 (1007)
.+|+.|+|++|+|++ +|..+. ++|+.|++++|+++. +|..+ .++|+.
T Consensus 283 --~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt~-------------------------LP~~l---~~sL~~ 329 (754)
T PRK15370 283 --EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLTA-------------------------LPETL---PPGLKT 329 (754)
T ss_pred --CCCcEEECCCCcccc-Ccccch--hhHHHHHhcCCcccc-------------------------CCccc---ccccee
Confidence 355555555555552 333221 244555555555543 33222 134555
Q ss_pred EeccCCCCCCCCCccccccCCCCEEEecCCCcCCCCCcccccccccccccccccccccCC
Q 001838 291 LNLGTNRFSGNIPSSITNASKLTVFQLRGNSFSGFIPNTIGNLRNLEFLNIADNYLTSST 350 (1007)
Q Consensus 291 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 350 (1007)
|++++|.+++ +|..+. ++|+.|++++|+|+. +|..+. ++|+.|+|++|+|+.++
T Consensus 330 L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~~-LP~~lp--~~L~~LdLs~N~Lt~LP 383 (754)
T PRK15370 330 LEAGENALTS-LPASLP--PELQVLDVSKNQITV-LPETLP--PTITTLDVSRNALTNLP 383 (754)
T ss_pred ccccCCcccc-CChhhc--CcccEEECCCCCCCc-CChhhc--CCcCEEECCCCcCCCCC
Confidence 6666666654 344332 466666666666653 444332 45666666666655443
No 420
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.87 E-value=2.9e-23 Score=204.75 Aligned_cols=241 Identities=24% Similarity=0.333 Sum_probs=172.0
Q ss_pred cceecccCceEEEEEEEcCCceEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecCCCC
Q 001838 731 NNLLGIGSFGSVYVARLQDGMEVAVKVFHQRY--ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGS 808 (1007)
Q Consensus 731 ~~~ig~G~~g~Vy~~~~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~gs 808 (1007)
..+|.+...|+.|+|+++ |..+++|++.-+. ....++|.+|.-.++-+.||||..++|.|..+....++..||+.|+
T Consensus 195 ~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gs 273 (448)
T KOG0195|consen 195 ITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGS 273 (448)
T ss_pred hhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchH
Confidence 345778889999999997 6677788876442 3445789999999999999999999999999999999999999999
Q ss_pred hhHhhhcCCC-CCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc---c-ccceeecc-eecCCCCcccc-cccccCCcc
Q 001838 809 LENRLYSGTC-MLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV---A-HISDFSIA-KFLNGQDQLSM-QTQTLATIG 881 (1007)
Q Consensus 809 L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~---~-kl~DFGla-~~~~~~~~~~~-~~~~~gt~~ 881 (1007)
|+..++++.. ..+..++.++|.++|+|++|||.. .+++-|.- . ...|-.+. +.-..+...+. ..+..-.+.
T Consensus 274 lynvlhe~t~vvvd~sqav~faldiargmaflhsl--ep~ipr~~lns~hvmidedltarismad~kfsfqe~gr~y~pa 351 (448)
T KOG0195|consen 274 LYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSL--EPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQEVGRAYSPA 351 (448)
T ss_pred HHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhc--chhhhhhhcccceEEecchhhhheecccceeeeeccccccCcc
Confidence 9999997653 467789999999999999999843 23333211 0 11222211 11111111110 112335788
Q ss_pred cccccccccCCCC---chhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhhHHHHH
Q 001838 882 YMAPEYGVQGRVS---TRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYFAAKE 958 (1007)
Q Consensus 882 y~aPE~~~~~~~~---~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 958 (1007)
||+||.+...+-+ ..+|+|||.|++||+.|++.||.+....+.....- .+ ..+...++
T Consensus 352 wmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkia---------le----------glrv~ipp 412 (448)
T KOG0195|consen 352 WMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIA---------LE----------GLRVHIPP 412 (448)
T ss_pred cCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhh---------hc----------cccccCCC
Confidence 9999998876643 46899999999999999999998753322111100 00 11111223
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHH
Q 001838 959 QSLLSILNLATECTIESPGKRINAREIVTGLLKIR 993 (1007)
Q Consensus 959 ~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~ 993 (1007)
.....+.+++.-|..+||.+||.+..|+-.|++++
T Consensus 413 gis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 413 GISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred CccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 34556889999999999999999999999999864
No 421
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.86 E-value=3.8e-21 Score=194.57 Aligned_cols=168 Identities=20% Similarity=0.152 Sum_probs=120.7
Q ss_pred CChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCC-CCceec--cccccceeecceecCCCCcccccccccCCcccc
Q 001838 807 GSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHS-TPIIHY--MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYM 883 (1007)
Q Consensus 807 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~-~~ivH~--~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~ 883 (1007)
|+|.+++......+++.++..++.|+++||+|||..+. .+|.-. ..+|+ ||.++..... ...||+.||
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~kp~Nil~~~~~~~~~--fG~~~~~~~~-------~~~g~~~y~ 71 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQAKSGNILLTWDGLLKL--DGSVAFKTPE-------QSRVDPYFM 71 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccEeEcCccceee--ccceEeeccc-------cCCCccccc
Confidence 78999998766679999999999999999999986442 233332 23455 9999876432 125889999
Q ss_pred cccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhhHHHHHHHH--
Q 001838 884 APEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYFAAKEQSL-- 961 (1007)
Q Consensus 884 aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-- 961 (1007)
|||++.+..++.++|||||||++|||+||+.||.........+..+.....+... ... .......
T Consensus 72 aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-----------~~~--~~~~~~~~~ 138 (176)
T smart00750 72 APEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDP-----------RDR--SNLESVSAA 138 (176)
T ss_pred ChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCc-----------ccc--ccHHHHHhh
Confidence 9999999999999999999999999999999997532222222222221111100 000 0011112
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHh
Q 001838 962 LSILNLATECTIESPGKRINAREIVTGLLKIRDTL 996 (1007)
Q Consensus 962 ~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~~~~ 996 (1007)
.++.+++.+||+.+|++||++.|+++++..+....
T Consensus 139 ~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~~ 173 (176)
T smart00750 139 RSFADFMRVCASRLPQRREAANHYLAHCRALFAET 173 (176)
T ss_pred hhHHHHHHHHHhcccccccCHHHHHHHHHHHHHHH
Confidence 26899999999999999999999999998876543
No 422
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.84 E-value=5.6e-21 Score=228.58 Aligned_cols=234 Identities=24% Similarity=0.384 Sum_probs=164.9
Q ss_pred ccccceEeCCCCCcEEEEEeCCCCCcccCcccccCCCCCCEEEcCCCCCCCCCCccccCcccCcEEeccCcccCCcchhh
Q 001838 56 CSWIGITCGVNSHKVIVLNISGFNLQGTIPPQLGNLSSLETLDLSHNKLSGNIPSSIFNMHTLKLLDFRDNQLFGSLSSF 135 (1007)
Q Consensus 56 C~w~gv~c~~~~~~v~~L~L~~~~l~~~~~~~l~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~ 135 (1007)
+.|.-..|-. ...+.|++++++++ .+|..+. ++|+.|+|++|+|+. +|..+. ++|+.|+|++|+|+.. |..
T Consensus 168 a~~r~~~Cl~--~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lts-LP~~l~--~nL~~L~Ls~N~LtsL-P~~ 238 (754)
T PRK15370 168 AVQRMRDCLK--NNKTELRLKILGLT-TIPACIP--EQITTLILDNNELKS-LPENLQ--GNIKTLYANSNQLTSI-PAT 238 (754)
T ss_pred HHHHHHhhcc--cCceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCCc-CChhhc--cCCCEEECCCCccccC-Chh
Confidence 3455556754 35789999999998 4676664 589999999999994 666554 5899999999999865 443
Q ss_pred hhhcCCCCeecccCcccCCCCchhHhhcCCCCcEEEccCccccccCCccccCCCCCcEEEcccccCCCCCCccccccccc
Q 001838 136 IFNMSSMLGIDLSINRFSGELPANICKNLPNLKKLLLGRNMFHGKIPSTLSKCKQLEGLYLRFNNLSGAIPKEIGNLTKL 215 (1007)
Q Consensus 136 ~~~l~~L~~LdLs~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 215 (1007)
+. .+|+.|+|++|++. .+|..+. ++|+.|+|++|+|+ .+|+.+. ++|+.|+|++|+|++ +|..+. ++|
T Consensus 239 l~--~~L~~L~Ls~N~L~-~LP~~l~---s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL 306 (754)
T PRK15370 239 LP--DTIQEMELSINRIT-ELPERLP---SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRT-LPAHLP--SGI 306 (754)
T ss_pred hh--ccccEEECcCCccC-cCChhHh---CCCCEEECcCCccC-ccccccC--CCCcEEECCCCcccc-Ccccch--hhH
Confidence 32 47999999999998 8888764 57999999999999 5777664 589999999999995 565553 479
Q ss_pred ceEEcccCcCCCCCCcccCCccccceeeccCccccccccccccCCCCCCeEEcccccccCcCCchhhcCCCCCcEEeccC
Q 001838 216 KDIILNDNELRGEIPQEMGNLPYLVRLTLATNNLVGVVPFTIFNMSTLKKLSLLENTLWGSLPSRIDLSLPNVEFLNLGT 295 (1007)
Q Consensus 216 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~lp~~~~~~l~~L~~L~Ls~ 295 (1007)
+.|++++|+++. +|..+. ++|+.|++++|.+++ +|..+. ++|+.|++++|++. .+|..+ .++|+.|+|++
T Consensus 307 ~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~l---p~~L~~LdLs~ 376 (754)
T PRK15370 307 THLNVQSNSLTA-LPETLP--PGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETL---PPTITTLDVSR 376 (754)
T ss_pred HHHHhcCCcccc-CCcccc--ccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhh---cCCcCEEECCC
Confidence 999999999995 555443 688889999988876 444332 45666666666553 344332 13455555555
Q ss_pred CCCCCCCCccccccCCCCEEEecCCCcC
Q 001838 296 NRFSGNIPSSITNASKLTVFQLRGNSFS 323 (1007)
Q Consensus 296 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 323 (1007)
|+++. +|..+. ..|+.|++++|+|+
T Consensus 377 N~Lt~-LP~~l~--~sL~~LdLs~N~L~ 401 (754)
T PRK15370 377 NALTN-LPENLP--AALQIMQASRNNLV 401 (754)
T ss_pred CcCCC-CCHhHH--HHHHHHhhccCCcc
Confidence 55542 233222 13444444444444
No 423
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.83 E-value=3.6e-21 Score=239.83 Aligned_cols=184 Identities=16% Similarity=0.168 Sum_probs=130.5
Q ss_pred cCC-CceeEEEEEE-------ecCCeeEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceec
Q 001838 779 IRH-RNLVKIISAC-------SNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHY 850 (1007)
Q Consensus 779 l~H-~niv~l~~~~-------~~~~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~ 850 (1007)
++| +||++++++| .+.+.++.+|||+ +++|.+++......+++.++..++.||++||+|| |+.+|+||
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~l---H~~gIvHr 104 (793)
T PLN00181 29 LSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAA---HSQGIVVH 104 (793)
T ss_pred hhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHH---HhCCeeec
Confidence 455 6888888887 2334577889988 5699999986656689999999999999999999 67899999
Q ss_pred ccc-------------------------------ccceeecceecCCCCc--------------ccccccccCCcccccc
Q 001838 851 MVA-------------------------------HISDFSIAKFLNGQDQ--------------LSMQTQTLATIGYMAP 885 (1007)
Q Consensus 851 ~~~-------------------------------kl~DFGla~~~~~~~~--------------~~~~~~~~gt~~y~aP 885 (1007)
|++ |++|||+++....... ........||++||||
T Consensus 105 DlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 184 (793)
T PLN00181 105 NVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSP 184 (793)
T ss_pred cCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceECh
Confidence 764 4667777764321000 0001124589999999
Q ss_pred cccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhhHHHHHHHHHHHH
Q 001838 886 EYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYFAAKEQSLLSIL 965 (1007)
Q Consensus 886 E~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 965 (1007)
|++.+..|+.++|||||||++|||++|..|+.... .....+.... ..+ .......+..
T Consensus 185 E~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~---~~~~~~~~~~--------~~~-----------~~~~~~~~~~ 242 (793)
T PLN00181 185 EEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS---RTMSSLRHRV--------LPP-----------QILLNWPKEA 242 (793)
T ss_pred hhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH---HHHHHHHHhh--------cCh-----------hhhhcCHHHH
Confidence 99999999999999999999999999998865311 0011110000 000 0001123456
Q ss_pred HHHhhcCCCCCCCCCCHHHHHHH
Q 001838 966 NLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 966 ~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
+++.+||+++|.+||+|.||+++
T Consensus 243 ~~~~~~L~~~P~~Rps~~eil~h 265 (793)
T PLN00181 243 SFCLWLLHPEPSCRPSMSELLQS 265 (793)
T ss_pred HHHHHhCCCChhhCcChHHHhhc
Confidence 78889999999999999999864
No 424
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.76 E-value=2.3e-18 Score=189.88 Aligned_cols=155 Identities=18% Similarity=0.173 Sum_probs=118.1
Q ss_pred HHHhcccccccceecccCceEEEEEEEc--CCceEEEEEechh-----hHHHHHHHHHHHHHHHhcCCCceeE-EEEEEe
Q 001838 721 LLQATDRFSKNNLLGIGSFGSVYVARLQ--DGMEVAVKVFHQR-----YERALKSFQDECEVMKRIRHRNLVK-IISACS 792 (1007)
Q Consensus 721 ~~~~~~~~~~~~~ig~G~~g~Vy~~~~~--~g~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~H~niv~-l~~~~~ 792 (1007)
+....++|...+.||+|+||+||+|+.+ +++.||||++... .....+.|.+|++++++++|+|||. ++++
T Consensus 13 ~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~-- 90 (365)
T PRK09188 13 IPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT-- 90 (365)
T ss_pred cccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc--
Confidence 3445678999999999999999999865 4778899987532 2234567999999999999999995 4432
Q ss_pred cCCeeEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc-c------------ccceee
Q 001838 793 NDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV-A------------HISDFS 859 (1007)
Q Consensus 793 ~~~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~-~------------kl~DFG 859 (1007)
+..|+|||||+|++|... ... . ...++.++++||.|| |+.+|+|||+ + ||+|||
T Consensus 91 --~~~~LVmE~~~G~~L~~~-~~~----~---~~~~~~~i~~aL~~l---H~~gIiHrDL~KP~NILv~~~~~ikLiDFG 157 (365)
T PRK09188 91 --GKDGLVRGWTEGVPLHLA-RPH----G---DPAWFRSAHRALRDL---HRAGITHNDLAKPQNWLMGPDGEAAVIDFQ 157 (365)
T ss_pred --CCcEEEEEccCCCCHHHh-Ccc----c---hHHHHHHHHHHHHHH---HHCCCeeCCCCCcceEEEcCCCCEEEEECc
Confidence 457999999999999732 111 1 145788999999999 6789999999 4 799999
Q ss_pred cceecCCCCcc------cccccccCCccccccccccc
Q 001838 860 IAKFLNGQDQL------SMQTQTLATIGYMAPEYGVQ 890 (1007)
Q Consensus 860 la~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~ 890 (1007)
+|+........ ...+...+++.|+|||++..
T Consensus 158 lA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 158 LASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred cceecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence 99977543211 11235578899999998754
No 425
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.74 E-value=1e-19 Score=203.23 Aligned_cols=250 Identities=24% Similarity=0.257 Sum_probs=126.1
Q ss_pred EEeCCCCCc-ccCcccccCCCCCCEEEcCCCCCCCC----CCccccCcccCcEEeccCcccCC------cchhhhhhcCC
Q 001838 73 LNISGFNLQ-GTIPPQLGNLSSLETLDLSHNKLSGN----IPSSIFNMHTLKLLDFRDNQLFG------SLSSFIFNMSS 141 (1007)
Q Consensus 73 L~L~~~~l~-~~~~~~l~~l~~L~~LdLs~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~------~~~~~~~~l~~ 141 (1007)
|+|.+++++ +.....+..++.|+.|+++++.++.. ++..+...++|++|++++|.+.+ .++..+.++++
T Consensus 3 l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~ 82 (319)
T cd00116 3 LSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCG 82 (319)
T ss_pred cccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCc
Confidence 556666665 23344455556667777776666432 44445555666666666666652 22344555666
Q ss_pred CCeecccCcccCCCCchhHhhcCCC---CcEEEccCccccc----cCCccccCC-CCCcEEEcccccCCCC----CCccc
Q 001838 142 MLGIDLSINRFSGELPANICKNLPN---LKKLLLGRNMFHG----KIPSTLSKC-KQLEGLYLRFNNLSGA----IPKEI 209 (1007)
Q Consensus 142 L~~LdLs~N~l~~~ip~~~~~~l~~---L~~L~Ls~N~l~~----~~p~~~~~l-~~L~~L~Ls~N~l~~~----~p~~~ 209 (1007)
|+.|++++|.+.+..+..+. .+.+ |++|++++|++++ .+...+..+ ++|+.|+|++|.+++. ++..+
T Consensus 83 L~~L~l~~~~~~~~~~~~~~-~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~ 161 (319)
T cd00116 83 LQELDLSDNALGPDGCGVLE-SLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKAL 161 (319)
T ss_pred eeEEEccCCCCChhHHHHHH-HHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHH
Confidence 66666666666543333322 2333 6666666666652 222334445 6666666666666532 22234
Q ss_pred ccccccceEEcccCcCCCC----CCcccCCccccceeeccCccccccc----cccccCCCCCCeEEcccccccCcCCchh
Q 001838 210 GNLTKLKDIILNDNELRGE----IPQEMGNLPYLVRLTLATNNLVGVV----PFTIFNMSTLKKLSLLENTLWGSLPSRI 281 (1007)
Q Consensus 210 ~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~----p~~~~~l~~L~~L~L~~N~l~~~lp~~~ 281 (1007)
..+++|++|++++|.+++. ++..+..+++|+.|+|++|.+.+.. +..+..+++|++|++++|.+.+.....+
T Consensus 162 ~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l 241 (319)
T cd00116 162 RANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAAL 241 (319)
T ss_pred HhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHH
Confidence 4455666666666666532 2223344456666666666655332 2223344555555555555432111111
Q ss_pred hc----CCCCCcEEeccCCCCCC----CCCccccccCCCCEEEecCCCcC
Q 001838 282 DL----SLPNVEFLNLGTNRFSG----NIPSSITNASKLTVFQLRGNSFS 323 (1007)
Q Consensus 282 ~~----~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~ 323 (1007)
.. ..+.|+.|++++|.++. .+...+...++|+.+++++|.++
T Consensus 242 ~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~ 291 (319)
T cd00116 242 ASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFG 291 (319)
T ss_pred HHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCc
Confidence 11 12455555555555541 11222233344555555555554
No 426
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.74 E-value=7.7e-19 Score=206.61 Aligned_cols=243 Identities=20% Similarity=0.196 Sum_probs=174.7
Q ss_pred cccceecccCceEEEEEEEc-CCceEEEEEec----hhh--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEE
Q 001838 729 SKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFH----QRY--ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIM 801 (1007)
Q Consensus 729 ~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~----~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 801 (1007)
...+++|.|++|.|+.+... .....+.|... ... .+....+..|..+-..++|||++..+..+.+....+-+|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 34678999999988877543 33334444332 111 122233677888888999999988877777666555569
Q ss_pred EecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCc
Q 001838 802 EYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQ 869 (1007)
Q Consensus 802 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~ 869 (1007)
|||++ +|..++.+.. .+...++..++.|+..|++|+ |..+|.|||++ ||+|||.+....-..+
T Consensus 401 E~~~~-Dlf~~~~~~~-~~~~~e~~c~fKqL~~Gv~y~---h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e 475 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMSNG-KLTPLEADCFFKQLLRGVKYL---HSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWE 475 (601)
T ss_pred hcccH-HHHHHHhccc-ccchhhhhHHHHHHHHHHHHH---HhcCceeccCccccEEEecCCceEEeecCcceeeccCcc
Confidence 99999 9999998752 367778888999999999999 78899999764 8999999987654433
Q ss_pred c--cccccccCCcccccccccccCCCCch-hhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhh
Q 001838 870 L--SMQTQTLATIGYMAPEYGVQGRVSTR-GDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNL 946 (1007)
Q Consensus 870 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~-~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~ 946 (1007)
. ......+|+..|+|||++....|+++ +||||.||++..|++|+.||......+.... .......
T Consensus 476 ~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~---~~~~~~~--------- 543 (601)
T KOG0590|consen 476 KNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFK---TNNYSDQ--------- 543 (601)
T ss_pred hhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchh---hhccccc---------
Confidence 3 45567889999999999999999875 7999999999999999999976543332210 0000000
Q ss_pred ccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 947 LSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 947 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
..............+.+...++.++++.+|.+|.|+.+|++.
T Consensus 544 ~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d 585 (601)
T KOG0590|consen 544 RNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILND 585 (601)
T ss_pred cccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhC
Confidence 000011112223345567889999999999999999999874
No 427
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.73 E-value=1.9e-16 Score=177.72 Aligned_cols=246 Identities=30% Similarity=0.399 Sum_probs=183.3
Q ss_pred ccccceecccCceEEEEEEEcCCceEEEEEechhhHH---HHHHHHHHHHHHHhcCCC-ceeEEEEEEecCCeeEEEEEe
Q 001838 728 FSKNNLLGIGSFGSVYVARLQDGMEVAVKVFHQRYER---ALKSFQDECEVMKRIRHR-NLVKIISACSNDDFKALIMEY 803 (1007)
Q Consensus 728 ~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~-niv~l~~~~~~~~~~~lv~E~ 803 (1007)
|...+.+|.|+||.||++... ..+|+|.+...... ....+.+|+.+++.+.|+ +|+++.+++......++++||
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 566788999999999999987 78999999765432 467899999999999988 799999999887778999999
Q ss_pred cCCCChhHhhhcCC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc-------------cccceeecceecCCCC
Q 001838 804 MPNGSLENRLYSGT--CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV-------------AHISDFSIAKFLNGQD 868 (1007)
Q Consensus 804 ~~~gsL~~~l~~~~--~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~-------------~kl~DFGla~~~~~~~ 868 (1007)
+.++++.+++.... ..+.......++.|++.++.|+ |+.+++|||+ ++++|||.++......
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~ 156 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYL---HSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG 156 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHH---HhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence 99999997776553 2578889999999999999999 6677999965 3889999998665432
Q ss_pred ccc----ccccccCCccccccccccc---CCCCchhhHHHHHHHHHHHHhCCCCCCccccC--cchHHHHHHhhcCccHH
Q 001838 869 QLS----MQTQTLATIGYMAPEYGVQ---GRVSTRGDVYSYGIMLMETFTGKKPTDEIFIG--ELSLSRWVNDLLPISVM 939 (1007)
Q Consensus 869 ~~~----~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~--~~~l~~~~~~~~~~~~~ 939 (1007)
... ......||..|+|||.+.. ..++...|+||+|++++++++|..|+...... .......+......
T Consensus 157 ~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~--- 233 (384)
T COG0515 157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTP--- 233 (384)
T ss_pred ccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCc---
Confidence 211 2355679999999999887 57899999999999999999999997653221 11111111111000
Q ss_pred HHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 940 EVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 940 ~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
........... ......+.+++..|+..+|..|.++.+....
T Consensus 234 -----~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 234 -----SLASPLSPSNP--ELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred -----ccccccCcccc--chhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 00000000000 1122467888899999999999999887765
No 428
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.72 E-value=2.7e-19 Score=199.77 Aligned_cols=109 Identities=26% Similarity=0.270 Sum_probs=60.4
Q ss_pred cccccccCCCCCcCCC----CccccccccccceEeCccccCCCCcccccc-----CCCCccEEeccccccc----cccCc
Q 001838 508 KDILFFDVSSNSLDGP----LSLDIGNLKVVIELNLSRNNLSGDIPITIG-----GLKNLQKLFLANNRLE----GPIPE 574 (1007)
Q Consensus 508 ~~L~~Ldls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-----~l~~L~~L~Ls~N~l~----~~~p~ 574 (1007)
++|+.|++++|.+++. ++..+..+++|+.|++++|.+++.....+. ..+.|+.|++++|.++ ..++.
T Consensus 193 ~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~ 272 (319)
T cd00116 193 CNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAE 272 (319)
T ss_pred CCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHH
Confidence 3444444444444322 122334456666777777766643332222 1357777777777775 12334
Q ss_pred cCcCCCCCCEEECCCCccccc----CCcchhhh-cCCCeeeCcCCcc
Q 001838 575 SFSGLSSLEILDLSKNKISGV----IPTSLEKL-LYLKKLNLSFNKL 616 (1007)
Q Consensus 575 ~~~~l~~L~~LdLs~N~l~~~----~p~~l~~l-~~L~~L~ls~N~l 616 (1007)
.+..+++|+.+|+++|.++.. ....+... +.|+.+++.+|++
T Consensus 273 ~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 273 VLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred HHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence 455557777777777777744 33333334 5677777777654
No 429
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.71 E-value=1.4e-16 Score=176.93 Aligned_cols=249 Identities=21% Similarity=0.248 Sum_probs=181.3
Q ss_pred cccccceecccCceEEEEEEEcCC--ceEEEEEechhhHHHHHHHHHHHHHHHhcCC----CceeEEEEEE-ecCCeeEE
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQDG--MEVAVKVFHQRYERALKSFQDECEVMKRIRH----RNLVKIISAC-SNDDFKAL 799 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~~g--~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H----~niv~l~~~~-~~~~~~~l 799 (1007)
+|...+.||+|+||.||+|..... ..+|+|.-..........+..|+.++..+.+ +++.++++.. ..+...|+
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 799999999999999999997653 4788888765432222267789999998873 6899999998 57788999
Q ss_pred EEEecCCCChhHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc-----------------ccceeecc
Q 001838 800 IMEYMPNGSLENRLYSGT-CMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA-----------------HISDFSIA 861 (1007)
Q Consensus 800 v~E~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~-----------------kl~DFGla 861 (1007)
||+.+ |.+|.++..... ..++.....+|+.|++.+|+++ |+.+++|||++ .+.|||+|
T Consensus 99 VM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~l---H~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla 174 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDL---HSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA 174 (322)
T ss_pred EEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHH---HhcCcccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence 99988 679999875443 5789999999999999999999 78999999774 57999999
Q ss_pred e--ecCCCCc----cc-c-cccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhh
Q 001838 862 K--FLNGQDQ----LS-M-QTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDL 933 (1007)
Q Consensus 862 ~--~~~~~~~----~~-~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~ 933 (1007)
+ ....... .. . .....||..|+++....+...+.+.|+||++.++.|+..|..||........ ..+.....
T Consensus 175 r~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~-~~~~~~~~ 253 (322)
T KOG1164|consen 175 RRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL-KSKFEKDP 253 (322)
T ss_pred ccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch-HHHHHHHh
Confidence 8 3322111 11 1 1234599999999999999999999999999999999999999975432111 11100000
Q ss_pred cCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHH
Q 001838 934 LPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKIRDT 995 (1007)
Q Consensus 934 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~~~ 995 (1007)
....... .....+.++.+++..+-..+..++|....+...++.....
T Consensus 254 ----~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~ 300 (322)
T KOG1164|consen 254 ----RKLLTDR-----------FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDS 300 (322)
T ss_pred ----hhhcccc-----------ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHh
Confidence 0000000 0001123455566566668899999999999998776654
No 430
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.70 E-value=5.6e-19 Score=163.26 Aligned_cols=156 Identities=35% Similarity=0.598 Sum_probs=117.1
Q ss_pred ccCCCCCCEEEcCCCCCCCCCCccccCcccCcEEeccCcccCCcchhhhhhcCCCCeecccCcccCCCCchhHhhcCCCC
Q 001838 88 LGNLSSLETLDLSHNKLSGNIPSSIFNMHTLKLLDFRDNQLFGSLSSFIFNMSSMLGIDLSINRFSGELPANICKNLPNL 167 (1007)
Q Consensus 88 l~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~ip~~~~~~l~~L 167 (1007)
+..+++.+.|.||+|+++ .+|+.+..|.+|+.|++++|+| + .+|..+. .+++|
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqi------------------------e-~lp~~is-sl~kl 81 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQI------------------------E-ELPTSIS-SLPKL 81 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchh------------------------h-hcChhhh-hchhh
Confidence 344556666666666666 4555566666666666555555 3 6777775 68888
Q ss_pred cEEEccCccccccCCccccCCCCCcEEEcccccCC-CCCCcccccccccceEEcccCcCCCCCCcccCCccccceeeccC
Q 001838 168 KKLLLGRNMFHGKIPSTLSKCKQLEGLYLRFNNLS-GAIPKEIGNLTKLKDIILNDNELRGEIPQEMGNLPYLVRLTLAT 246 (1007)
Q Consensus 168 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 246 (1007)
+.|+++-|++. +.|..|+.++.|+.|||++|+++ ..+|..|..++.|+.|+|++|.++ .+|..++++++|+.|.+.+
T Consensus 82 r~lnvgmnrl~-~lprgfgs~p~levldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrd 159 (264)
T KOG0617|consen 82 RILNVGMNRLN-ILPRGFGSFPALEVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRD 159 (264)
T ss_pred hheecchhhhh-cCccccCCCchhhhhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeecc
Confidence 88888888887 78888999999999999999885 467888888888888888888888 7788888888888888888
Q ss_pred ccccccccccccCCCCCCeEEcccccc
Q 001838 247 NNLVGVVPFTIFNMSTLKKLSLLENTL 273 (1007)
Q Consensus 247 N~l~~~~p~~~~~l~~L~~L~L~~N~l 273 (1007)
|.+. ..|..++.+..|++|.+.+|.+
T Consensus 160 ndll-~lpkeig~lt~lrelhiqgnrl 185 (264)
T KOG0617|consen 160 NDLL-SLPKEIGDLTRLRELHIQGNRL 185 (264)
T ss_pred Cchh-hCcHHHHHHHHHHHHhccccee
Confidence 8876 3566666666666666666665
No 431
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.70 E-value=2.3e-19 Score=165.82 Aligned_cols=162 Identities=33% Similarity=0.574 Sum_probs=132.1
Q ss_pred CcEEEEEeCCCCCcccCcccccCCCCCCEEEcCCCCCCCCCCccccCcccCcEEeccCcccCCcchhhhhhcCCCCeecc
Q 001838 68 HKVIVLNISGFNLQGTIPPQLGNLSSLETLDLSHNKLSGNIPSSIFNMHTLKLLDFRDNQLFGSLSSFIFNMSSMLGIDL 147 (1007)
Q Consensus 68 ~~v~~L~L~~~~l~~~~~~~l~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdL 147 (1007)
..++.|.||+|+++ .+|+.+..|.+|+.|++++|+|+ .+|.+++++++|++|+++-|++. ..|..|+.++.|+.|||
T Consensus 33 s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levldl 109 (264)
T KOG0617|consen 33 SNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLDL 109 (264)
T ss_pred hhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhhc
Confidence 47899999999998 78999999999999999999999 78999999999999999999984 67888888888888888
Q ss_pred cCcccCC-CCchhHhhcCCCCcEEEccCccccccCCccccCCCCCcEEEcccccCCCCCCcccccccccceEEcccCcCC
Q 001838 148 SINRFSG-ELPANICKNLPNLKKLLLGRNMFHGKIPSTLSKCKQLEGLYLRFNNLSGAIPKEIGNLTKLKDIILNDNELR 226 (1007)
Q Consensus 148 s~N~l~~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 226 (1007)
++|+++. .+|.++| .++.|+.|.|+.|.|. .+|..++++++|+.|.+..|.+- .+|.+++.+++|+.|.+.+|+++
T Consensus 110 tynnl~e~~lpgnff-~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl~ 186 (264)
T KOG0617|consen 110 TYNNLNENSLPGNFF-YMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRLT 186 (264)
T ss_pred cccccccccCCcchh-HHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccceee
Confidence 8888874 4566666 5777777777777776 67777777777777777777776 57777777777777777777777
Q ss_pred CCCCcccCCc
Q 001838 227 GEIPQEMGNL 236 (1007)
Q Consensus 227 ~~~p~~~~~l 236 (1007)
.+|.+++++
T Consensus 187 -vlppel~~l 195 (264)
T KOG0617|consen 187 -VLPPELANL 195 (264)
T ss_pred -ecChhhhhh
Confidence 455555443
No 432
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.69 E-value=5.9e-17 Score=181.30 Aligned_cols=205 Identities=26% Similarity=0.342 Sum_probs=148.6
Q ss_pred HHhcCCCceeEEEEEEecCCeeEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceec-----
Q 001838 776 MKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHY----- 850 (1007)
Q Consensus 776 l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~----- 850 (1007)
|+.+.|.|+.+++|.+.++...+.|.+||..|+|.+.+..+...++|.-...++.+|+.||+|+| +++.-.|.
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh--~s~i~~hg~l~s~ 78 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLH--NSPIGYHGALKSS 78 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHh--cCcceeeeeeccc
Confidence 35678999999999999999999999999999999999987777999999999999999999996 44433664
Q ss_pred -------cccccceeecceecCCCCcccccccccCCcccccccccccCC-------CCchhhHHHHHHHHHHHHhCCCCC
Q 001838 851 -------MVAHISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGR-------VSTRGDVYSYGIMLMETFTGKKPT 916 (1007)
Q Consensus 851 -------~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-------~~~~~DvwS~Gvil~elltG~~p~ 916 (1007)
.+.|++|||+.................-..-|.|||.+.... .+.+.||||||++++|+++++.||
T Consensus 79 nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~ 158 (484)
T KOG1023|consen 79 NCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPF 158 (484)
T ss_pred cceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCcc
Confidence 345999999998774311111111222344699999877631 467899999999999999999999
Q ss_pred CccccCcc--hHHHHHHhhcCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHH
Q 001838 917 DEIFIGEL--SLSRWVNDLLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKIRD 994 (1007)
Q Consensus 917 ~~~~~~~~--~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~~ 994 (1007)
+....... .+..++......... +.+ ....+...++..++..||.++|++||++++|-..++.+..
T Consensus 159 ~~~~~~~~~~eii~~~~~~~~~~~r----P~i--------~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~ 226 (484)
T KOG1023|consen 159 DLRNLVEDPDEIILRVKKGGSNPFR----PSI--------ELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINK 226 (484)
T ss_pred ccccccCChHHHHHHHHhcCCCCcC----cch--------hhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcc
Confidence 87443332 222222221100000 000 0001223468999999999999999999999888876655
No 433
>PLN03150 hypothetical protein; Provisional
Probab=99.66 E-value=3.4e-16 Score=187.48 Aligned_cols=154 Identities=25% Similarity=0.435 Sum_probs=124.8
Q ss_pred hhcCCcchHHHHHHHHHhcccCCCCccccCCCCCCCCc----cccceEeCC--CC--CcEEEEEeCCCCCcccCcccccC
Q 001838 19 AASNITTDQQSLLALKAHISYDPTNLFAKNWTSSTSVC----SWIGITCGV--NS--HKVIVLNISGFNLQGTIPPQLGN 90 (1007)
Q Consensus 19 ~~~~~~~~~~~ll~~k~~~~~~~~~~~~~~w~~~~~~C----~w~gv~c~~--~~--~~v~~L~L~~~~l~~~~~~~l~~ 90 (1007)
...+.+.|.+||+++|+.+. ++.. . +|.. ..|| .|.||.|+. .. ..|+.|+|++|+++|.+|++++.
T Consensus 366 ~~~t~~~~~~aL~~~k~~~~-~~~~--~-~W~g-~~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~i~~ 440 (623)
T PLN03150 366 ESKTLLEEVSALQTLKSSLG-LPLR--F-GWNG-DPCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISK 440 (623)
T ss_pred ccccCchHHHHHHHHHHhcC-Cccc--C-CCCC-CCCCCcccccccceeeccCCCCceEEEEEECCCCCccccCCHHHhC
Confidence 34567789999999999975 4432 2 7964 3332 799999953 22 25999999999999999999999
Q ss_pred CCCCCEEEcCCCCCCCCCCccccCcccCcEEeccCcccCCcchhhhhhcCCCCeecccCcccCCCCchhHhhcCCCCcEE
Q 001838 91 LSSLETLDLSHNKLSGNIPSSIFNMHTLKLLDFRDNQLFGSLSSFIFNMSSMLGIDLSINRFSGELPANICKNLPNLKKL 170 (1007)
Q Consensus 91 l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~ip~~~~~~l~~L~~L 170 (1007)
+++|+.|+|++|.|+|.+|..++.+++|+.|||++|+++|.+|..+.++++|+.|||++|+++|.+|..+...+.++..+
T Consensus 441 L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l 520 (623)
T PLN03150 441 LRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASF 520 (623)
T ss_pred CCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhhccccCceE
Confidence 99999999999999999999999999999999999999988888888888888888888888888888775434456666
Q ss_pred EccCccc
Q 001838 171 LLGRNMF 177 (1007)
Q Consensus 171 ~Ls~N~l 177 (1007)
++++|..
T Consensus 521 ~~~~N~~ 527 (623)
T PLN03150 521 NFTDNAG 527 (623)
T ss_pred EecCCcc
Confidence 6666654
No 434
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.65 E-value=8e-16 Score=150.38 Aligned_cols=196 Identities=22% Similarity=0.297 Sum_probs=158.7
Q ss_pred HHHHHHhcccccccceecccCceEEEEEE-EcCCceEEEEEechhhHHHHHHHHHHHHHHHhcCC-CceeEEEEEEecCC
Q 001838 718 YHELLQATDRFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRH-RNLVKIISACSNDD 795 (1007)
Q Consensus 718 ~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H-~niv~l~~~~~~~~ 795 (1007)
.+++.. ..+|...+.||+|+||.+|.|. ..+|.+||||.=..... ..++..|..+.+.++| ..|..+..|..+++
T Consensus 8 ~~~~iv-~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~--hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ 84 (341)
T KOG1163|consen 8 LEELIV-GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK--HPQLLYESKVYRILQGGVGIPHIRHYGTEKD 84 (341)
T ss_pred hhhhee-ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC--CcchhHHHHHHHHhccCCCCchhhhhccccc
Confidence 344443 3679999999999999999997 55799999998654322 2457789999999974 67778888888899
Q ss_pred eeEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc---------------ccceeec
Q 001838 796 FKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA---------------HISDFSI 860 (1007)
Q Consensus 796 ~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~---------------kl~DFGl 860 (1007)
.-.+|||.. |.+|++...-....++....+-.|-|++.-++|+ |..+.||||++ .++|||+
T Consensus 85 ynvlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyv---H~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGL 160 (341)
T KOG1163|consen 85 YNVLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYV---HLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGL 160 (341)
T ss_pred cceeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHH---HhhccccccCCccceeeccccccceEEEEeccc
Confidence 999999998 7799998876556688899999999999999999 67789999886 5899999
Q ss_pred ceecCCCCc-----ccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccc
Q 001838 861 AKFLNGQDQ-----LSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIF 920 (1007)
Q Consensus 861 a~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~ 920 (1007)
|+...+... +...+...||..|.+--...+..-+.+-|+=|+|.++...-.|..||++..
T Consensus 161 aKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglk 225 (341)
T KOG1163|consen 161 AKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLK 225 (341)
T ss_pred hhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccc
Confidence 997643211 122245579999998877666677889999999999999999999999754
No 435
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.61 E-value=9.9e-15 Score=149.37 Aligned_cols=188 Identities=20% Similarity=0.305 Sum_probs=157.1
Q ss_pred cccccceecccCceEEEEEE-EcCCceEEEEEechhhHHHHHHHHHHHHHHHhcC-CCceeEEEEEEecCCeeEEEEEec
Q 001838 727 RFSKNNLLGIGSFGSVYVAR-LQDGMEVAVKVFHQRYERALKSFQDECEVMKRIR-HRNLVKIISACSNDDFKALIMEYM 804 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~E~~ 804 (1007)
.|.+.++||+|+||+.+.|+ +-++++||||.=....+ ..++..|.+..+.+. .+.|...+.+..++-+-.||+|..
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~--APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL 106 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSE--APQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL 106 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccccCC--cchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh
Confidence 68889999999999999997 44799999997543321 245677888888775 789999998888888889999998
Q ss_pred CCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc-----------------ccceeecceecCCC
Q 001838 805 PNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA-----------------HISDFSIAKFLNGQ 867 (1007)
Q Consensus 805 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~-----------------kl~DFGla~~~~~~ 867 (1007)
|.||+++..-.++.++...+..||.|+..-++|+ |++.+|.||++ +++|||+||...+.
T Consensus 107 -GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~v---H~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp 182 (449)
T KOG1165|consen 107 -GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYV---HEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDP 182 (449)
T ss_pred -CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHH---HhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCc
Confidence 7799999887777799999999999999999999 56778888875 69999999987644
Q ss_pred Cc-----ccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccc
Q 001838 868 DQ-----LSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIF 920 (1007)
Q Consensus 868 ~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~ 920 (1007)
.. +....+..||..||+--...+.+-+.+-|+=|+|-+++..+.|..||++..
T Consensus 183 ~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLK 240 (449)
T KOG1165|consen 183 KTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLK 240 (449)
T ss_pred cccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCcccccc
Confidence 32 222345679999999998888889999999999999999999999998743
No 436
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.61 E-value=2e-15 Score=153.32 Aligned_cols=129 Identities=17% Similarity=0.181 Sum_probs=97.8
Q ss_pred cceecccCceEEEEEEEcCCceEEEEEechhhHH--H------------------------HHHHHHHHHHHHhcCCCce
Q 001838 731 NNLLGIGSFGSVYVARLQDGMEVAVKVFHQRYER--A------------------------LKSFQDECEVMKRIRHRNL 784 (1007)
Q Consensus 731 ~~~ig~G~~g~Vy~~~~~~g~~vavK~~~~~~~~--~------------------------~~~~~~E~~~l~~l~H~ni 784 (1007)
.+.||+|+||.||+|...+|+.||||+++..... . ......|++.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 3679999999999999888999999999754210 0 1123459999999987776
Q ss_pred eEEEEEEecCCeeEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc-----------
Q 001838 785 VKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA----------- 853 (1007)
Q Consensus 785 v~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~----------- 853 (1007)
.....+... ..++||||++++++....... ..++.....+++.|++.+|.|+| |+.+|+|||++
T Consensus 82 ~~p~~~~~~--~~~iVmE~i~g~~l~~~~~~~-~~~~~~~~~~i~~qi~~~L~~l~--H~~giiHrDlkP~NIli~~~~v 156 (190)
T cd05147 82 PCPEPILLK--SHVLVMEFIGDDGWAAPRLKD-APLSESKARELYLQVIQIMRILY--QDCRLVHADLSEYNLLYHDGKL 156 (190)
T ss_pred CCCcEEEec--CCEEEEEEeCCCCCcchhhhc-CCCCHHHHHHHHHHHHHHHHHHH--HhCCcccCCCCHHHEEEECCcE
Confidence 433332222 238999999998776543322 35788899999999999999997 67789999874
Q ss_pred ccceeecceec
Q 001838 854 HISDFSIAKFL 864 (1007)
Q Consensus 854 kl~DFGla~~~ 864 (1007)
+++|||+|...
T Consensus 157 ~LiDFG~a~~~ 167 (190)
T cd05147 157 YIIDVSQSVEH 167 (190)
T ss_pred EEEEccccccC
Confidence 89999999864
No 437
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.58 E-value=2.1e-15 Score=154.22 Aligned_cols=159 Identities=14% Similarity=0.159 Sum_probs=119.3
Q ss_pred cccccccceecccCceEEEEEEEcCCceEEEEEechhhH---HHHHH------HHHHHHHHHhcCCCceeEEEEEEecC-
Q 001838 725 TDRFSKNNLLGIGSFGSVYVARLQDGMEVAVKVFHQRYE---RALKS------FQDECEVMKRIRHRNLVKIISACSND- 794 (1007)
Q Consensus 725 ~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~~~~~~~---~~~~~------~~~E~~~l~~l~H~niv~l~~~~~~~- 794 (1007)
.++|...+++|.|+||.||.+.. ++..+|||.+..... ..... +.+|+..+.+++||+|....+++...
T Consensus 30 ~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~ 108 (232)
T PRK10359 30 SYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAE 108 (232)
T ss_pred hCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecc
Confidence 57899999999999999999765 577899999975432 22222 68999999999999999999886533
Q ss_pred -------CeeEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc-----------ccc
Q 001838 795 -------DFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA-----------HIS 856 (1007)
Q Consensus 795 -------~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~-----------kl~ 856 (1007)
+..++||||++|.+|.++.. ++. ....+++.++..+ |..+++|+|+. +++
T Consensus 109 ~~~~~~~~~~~lvmEyi~G~tL~~~~~-----~~~----~~~~~i~~~l~~l---H~~gi~H~Dikp~Nili~~~gi~li 176 (232)
T PRK10359 109 RKTLRYAHTYIMLIEYIEGVELNDMPE-----ISE----DVKAKIKASIESL---HQHGMVSGDPHKGNFIVSKNGLRII 176 (232)
T ss_pred cccccccCCeEEEEEEECCccHHHhhh-----ccH----HHHHHHHHHHHHH---HHcCCccCCCChHHEEEeCCCEEEE
Confidence 35789999999999988632 222 2456899999999 67899999763 789
Q ss_pred eeecceecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHH
Q 001838 857 DFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETF 910 (1007)
Q Consensus 857 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ell 910 (1007)
|||..+....+... ..+.....|+.++|+|||||.+.-..
T Consensus 177 Dfg~~~~~~e~~a~--------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 177 DLSGKRCTAQRKAK--------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred ECCCcccccchhhH--------------HHHHHHhHhcccccccceeEeehHHH
Confidence 99987755321110 11334445778999999999876654
No 438
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.57 E-value=1.2e-15 Score=177.72 Aligned_cols=234 Identities=22% Similarity=0.294 Sum_probs=162.9
Q ss_pred cccccceecccCceEEEEEEEcCCceEEEEEechhhH-HHHHHH---HHHHHHHHhcCCCceeEEEEEEecCCeeEEEEE
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQDGMEVAVKVFHQRYE-RALKSF---QDECEVMKRIRHRNLVKIISACSNDDFKALIME 802 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~~~~~~~-~~~~~~---~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E 802 (1007)
.|...+.+|++.|=+|.+|+.+.|. |+||++-++.+ -..+.| .+|++ ..-.+|||++.+.-+-......|||=+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 4666788999999999999998886 99999865542 122333 34444 455689999999888777778889999
Q ss_pred ecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceec--CCCC
Q 001838 803 YMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFL--NGQD 868 (1007)
Q Consensus 803 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~--~~~~ 868 (1007)
|..+ +|+|.+..+. .+...+.+=||.|+..|+.-+ |..+|.|+|++ .++||.--|.. +.+.
T Consensus 102 yvkh-nLyDRlSTRP-FL~~iEKkWiaFQLL~al~qc---H~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDN 176 (1431)
T KOG1240|consen 102 YVKH-NLYDRLSTRP-FLVLIEKKWIAFQLLKALSQC---HKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDN 176 (1431)
T ss_pred HHhh-hhhhhhccch-HHHHHHHHHHHHHHHHHHHHH---HHcCccccccccceEEEeeechhhhhcccccCCccCCCCC
Confidence 9865 8999987654 355566666999999999999 78899999997 58999765532 2221
Q ss_pred ccccc---ccccCCcccccccccccC----------C-CCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhh
Q 001838 869 QLSMQ---TQTLATIGYMAPEYGVQG----------R-VSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDL 933 (1007)
Q Consensus 869 ~~~~~---~~~~gt~~y~aPE~~~~~----------~-~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~ 933 (1007)
..... .+...-.+|+|||.+... . .+++-||||.||+++|+++ |++||+-. .+..+....
T Consensus 177 Padf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS-----QL~aYr~~~ 251 (1431)
T KOG1240|consen 177 PADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS-----QLLAYRSGN 251 (1431)
T ss_pred cccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH-----HHHhHhccC
Confidence 11100 011122379999976541 2 5788999999999999987 78888631 111111110
Q ss_pred --cCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 001838 934 --LPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGL 989 (1007)
Q Consensus 934 --~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L 989 (1007)
.++...+.+. ...+..++..|++.||++|.+|.+.++.-
T Consensus 252 ~~~~e~~Le~Ie-----------------d~~~Rnlil~Mi~rdPs~RlSAedyL~~y 292 (1431)
T KOG1240|consen 252 ADDPEQLLEKIE-----------------DVSLRNLILSMIQRDPSKRLSAEDYLQKY 292 (1431)
T ss_pred ccCHHHHHHhCc-----------------CccHHHHHHHHHccCchhccCHHHHHHhh
Confidence 0011111110 12478899999999999999999999883
No 439
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.57 E-value=5e-15 Score=154.66 Aligned_cols=186 Identities=20% Similarity=0.185 Sum_probs=126.4
Q ss_pred CCCceeEEEEEEec---------------------------CCeeEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHH
Q 001838 780 RHRNLVKIISACSN---------------------------DDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDV 832 (1007)
Q Consensus 780 ~H~niv~l~~~~~~---------------------------~~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i 832 (1007)
+|||||++.++|.+ +...|+||.-++. +|.+++..+. .+...+.-|..|+
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~--~s~r~~~~~laQl 350 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRH--RSYRTGRVILAQL 350 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCC--CchHHHHHHHHHH
Confidence 59999999998754 1246899988865 8999997654 3444555588999
Q ss_pred HHHHHHHHhcCCCCceecccc----------------ccceeecceecCCC-Ccc---cccccccCCcccccccccccCC
Q 001838 833 ALALEYLHFGHSTPIIHYMVA----------------HISDFSIAKFLNGQ-DQL---SMQTQTLATIGYMAPEYGVQGR 892 (1007)
Q Consensus 833 a~~l~yLH~~~~~~ivH~~~~----------------kl~DFGla~~~~~~-~~~---~~~~~~~gt~~y~aPE~~~~~~ 892 (1007)
++|+.|| |.++|.|||++ .|+|||.+--.... -+. +..-..-|...-||||+....+
T Consensus 351 LEav~hL---~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~P 427 (598)
T KOG4158|consen 351 LEAVTHL---HKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVP 427 (598)
T ss_pred HHHHHHH---HHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCC
Confidence 9999999 78899999875 58999987533210 000 1111223666789999865422
Q ss_pred -----C-CchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhhHHHHHHHHHHHHH
Q 001838 893 -----V-STRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYFAAKEQSLLSILN 966 (1007)
Q Consensus 893 -----~-~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 966 (1007)
. -.|+|.|+.|.+.||+++...||......-.+...+.+.-. +..++.++..+.+
T Consensus 428 Gp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qL-------------------Palp~~vpp~~rq 488 (598)
T KOG4158|consen 428 GPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQL-------------------PALPSRVPPVARQ 488 (598)
T ss_pred CCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhC-------------------CCCcccCChHHHH
Confidence 1 35899999999999999999999762211111111111110 1112233456888
Q ss_pred HHhhcCCCCCCCCCCHHHHHHHHH
Q 001838 967 LATECTIESPGKRINAREIVTGLL 990 (1007)
Q Consensus 967 l~~~cl~~~p~~Rpt~~evl~~L~ 990 (1007)
++...++.||++|++..-....|.
T Consensus 489 lV~~lL~r~pskRvsp~iAANvl~ 512 (598)
T KOG4158|consen 489 LVFDLLKRDPSKRVSPNIAANVLN 512 (598)
T ss_pred HHHHHhcCCccccCCccHHHhHHH
Confidence 999999999999999877666654
No 440
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.55 E-value=4.6e-16 Score=173.42 Aligned_cols=213 Identities=25% Similarity=0.325 Sum_probs=159.7
Q ss_pred eecccCceEEEEEE----EcCCceEEEEEechhhH--HHHHHHHHHHHHHHhcC-CCceeEEEEEEecCCeeEEEEEecC
Q 001838 733 LLGIGSFGSVYVAR----LQDGMEVAVKVFHQRYE--RALKSFQDECEVMKRIR-HRNLVKIISACSNDDFKALIMEYMP 805 (1007)
Q Consensus 733 ~ig~G~~g~Vy~~~----~~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~E~~~ 805 (1007)
.+|+|+||.|+.++ .+.|+.+|.|+.++... +.......|..++..++ ||.+|++..++..+...+++++|..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 36899999999764 33477889998865432 11225567888999997 9999999999999999999999999
Q ss_pred CCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecceecCCCCccccc
Q 001838 806 NGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIAKFLNGQDQLSMQ 873 (1007)
Q Consensus 806 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla~~~~~~~~~~~~ 873 (1007)
+|.+...+.... .++......+...+|-|++++ |..+|+||+. .|+.|||+++...+..
T Consensus 81 gg~lft~l~~~~-~f~~~~~~~~~aelaLald~l---h~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~----- 151 (612)
T KOG0603|consen 81 GGDLFTRLSKEV-MFDELDVAFYLAELALALDHL---HKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEK----- 151 (612)
T ss_pred cchhhhccccCC-chHHHHHHHHHHHHHHHHhhc---chhHHHHhcccccceeecccCccccCCchhhhHhHhhh-----
Confidence 999998887654 355555556777888999999 7888999876 4899999999765332
Q ss_pred ccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhh
Q 001838 874 TQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERY 953 (1007)
Q Consensus 874 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~ 953 (1007)
..+||..|||||++. .+...+|.|||||+.+||+||..||... . +..|-. ..
T Consensus 152 -~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~~------~------------~~~Il~---~~---- 203 (612)
T KOG0603|consen 152 -IACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGGD------T------------MKRILK---AE---- 203 (612)
T ss_pred -hcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCchH------H------------HHHHhh---hc----
Confidence 228999999999987 6788999999999999999999999751 0 011100 00
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCCH
Q 001838 954 FAAKEQSLLSILNLATECTIESPGKRINA 982 (1007)
Q Consensus 954 ~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~ 982 (1007)
...+.+....+.++...+...+|..|.-.
T Consensus 204 ~~~p~~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 204 LEMPRELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred cCCchhhhHHHHHHHHHHHhhCHHHHhcc
Confidence 01122334456677777788888888654
No 441
>PLN03150 hypothetical protein; Provisional
Probab=99.55 E-value=4.8e-15 Score=177.61 Aligned_cols=118 Identities=39% Similarity=0.622 Sum_probs=97.3
Q ss_pred ccceEeCccccCCCCccccccCCCCccEEeccccccccccCccCcCCCCCCEEECCCCcccccCCcchhhhcCCCeeeCc
Q 001838 533 VVIELNLSRNNLSGDIPITIGGLKNLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNKISGVIPTSLEKLLYLKKLNLS 612 (1007)
Q Consensus 533 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~ls 612 (1007)
.++.|+|++|.++|.+|..++.+++|+.|+|++|+|+|.+|..++.+++|+.|||++|+|+|.+|..+.++++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 36678888888888888888888899999999999988888888888899999999999998889888888999999999
Q ss_pred CCccccccCCCC--cCCCCcccccccccccCCCCCCCCCCCC
Q 001838 613 FNKLEGEIPRGG--PFANLTAKSFLGNELLCGLPDLHNSPCK 652 (1007)
Q Consensus 613 ~N~l~~~ip~~~--~~~~~~~~~~~~n~~lc~~p~~~~~~c~ 652 (1007)
+|+++|.+|..- .+..+....+.+|+.+|+.|.. ..|.
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~l--~~C~ 538 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPGL--RACG 538 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCCCC--CCCc
Confidence 999998888642 1233455678899999997643 4674
No 442
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.51 E-value=1.3e-13 Score=140.78 Aligned_cols=129 Identities=22% Similarity=0.238 Sum_probs=98.8
Q ss_pred cceecccCceEEEEEEEcCCceEEEEEechhhH--------------------------HHHHHHHHHHHHHHhcCCCce
Q 001838 731 NNLLGIGSFGSVYVARLQDGMEVAVKVFHQRYE--------------------------RALKSFQDECEVMKRIRHRNL 784 (1007)
Q Consensus 731 ~~~ig~G~~g~Vy~~~~~~g~~vavK~~~~~~~--------------------------~~~~~~~~E~~~l~~l~H~ni 784 (1007)
.+.||+|+||+||+|+..+|+.||||+++.... .....+..|.+.+.++.|++|
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 467999999999999987899999999875321 002234679999999999987
Q ss_pred eEEEEEEecCCeeEEEEEecCCCChhHh-hhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc----------
Q 001838 785 VKIISACSNDDFKALIMEYMPNGSLENR-LYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA---------- 853 (1007)
Q Consensus 785 v~l~~~~~~~~~~~lv~E~~~~gsL~~~-l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~---------- 853 (1007)
.....+.... .++||||++++++... +.. ..++..+..+++.|++.++.|+| +..+|+|||++
T Consensus 82 ~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~--~~~~~~~~~~i~~~l~~~l~~lH--~~~givHrDlkP~NIll~~~~ 155 (190)
T cd05145 82 PVPEPILLKK--NVLVMEFIGDDGSPAPRLKD--VPLEEEEAEELYEQVVEQMRRLY--QEAGLVHGDLSEYNILYHDGK 155 (190)
T ss_pred CCceEEEecC--CEEEEEEecCCCchhhhhhh--ccCCHHHHHHHHHHHHHHHHHHH--HhCCEecCCCChhhEEEECCC
Confidence 5544443332 4899999998865443 332 24677788899999999999996 33799999874
Q ss_pred -ccceeecceecC
Q 001838 854 -HISDFSIAKFLN 865 (1007)
Q Consensus 854 -kl~DFGla~~~~ 865 (1007)
+++|||+|+...
T Consensus 156 ~~liDFG~a~~~~ 168 (190)
T cd05145 156 PYIIDVSQAVELD 168 (190)
T ss_pred EEEEEcccceecC
Confidence 899999998764
No 443
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.47 E-value=2.8e-13 Score=135.45 Aligned_cols=174 Identities=16% Similarity=0.111 Sum_probs=125.8
Q ss_pred cccceecccCceEEEEEEEcCCceEEEEEechhhH----HHHHHHHHHHHHHHhcC-CCceeEEEEEEecCCeeEEEEEe
Q 001838 729 SKNNLLGIGSFGSVYVARLQDGMEVAVKVFHQRYE----RALKSFQDECEVMKRIR-HRNLVKIISACSNDDFKALIMEY 803 (1007)
Q Consensus 729 ~~~~~ig~G~~g~Vy~~~~~~g~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~E~ 803 (1007)
.....+++|+||+||.+.- ++..++.+.+..... -....|.+|+++|+++. |++|++++++ +..++||||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 3467899999999997765 577888777764432 11235789999999995 5889999886 346999999
Q ss_pred cCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc-c------------ccceeecceecCCCCcc
Q 001838 804 MPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV-A------------HISDFSIAKFLNGQDQL 870 (1007)
Q Consensus 804 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~-~------------kl~DFGla~~~~~~~~~ 870 (1007)
++|.+|.+.+.. ....++.|++++++|+ |..+|+|||+ + +|+|||+|.........
T Consensus 80 I~G~~L~~~~~~--------~~~~~~~qi~~~L~~l---H~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~ 148 (218)
T PRK12274 80 LAGAAMYQRPPR--------GDLAYFRAARRLLQQL---HRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARW 148 (218)
T ss_pred ecCccHHhhhhh--------hhHHHHHHHHHHHHHH---HHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchH
Confidence 999998764421 1134778999999999 6789999988 3 69999999865432210
Q ss_pred ------cc-----cccccCCcccccccccccC-CCC-chhhHHHHHHHHHHHHhCCCCCCc
Q 001838 871 ------SM-----QTQTLATIGYMAPEYGVQG-RVS-TRGDVYSYGIMLMETFTGKKPTDE 918 (1007)
Q Consensus 871 ------~~-----~~~~~gt~~y~aPE~~~~~-~~~-~~~DvwS~Gvil~elltG~~p~~~ 918 (1007)
.. ..-...++.|++|+...-. ..+ .+.+.++-|.-+|.++||..|.-.
T Consensus 149 ~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 149 MRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence 00 0112367788888743221 233 567899999999999999998643
No 444
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.47 E-value=1.8e-14 Score=157.76 Aligned_cols=162 Identities=23% Similarity=0.296 Sum_probs=116.2
Q ss_pred eeEEEEEecCCCChhHhhhcC--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc------------cccceeecc
Q 001838 796 FKALIMEYMPNGSLENRLYSG--TCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV------------AHISDFSIA 861 (1007)
Q Consensus 796 ~~~lv~E~~~~gsL~~~l~~~--~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~------------~kl~DFGla 861 (1007)
..|+.|++|+..+|.+|+.+. ....++.....++.|++.|++| ++.+|++. .||.|||+.
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDFgl~ 403 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDFGLV 403 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhhhhhe
Confidence 578999999999999999643 3456788889999999999998 56788765 489999999
Q ss_pred eecCCCC----cccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhcCc
Q 001838 862 KFLNGQD----QLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFT-GKKPTDEIFIGELSLSRWVNDLLPI 936 (1007)
Q Consensus 862 ~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~ 936 (1007)
....... .....+...||..||+||.+.+..|+.|+||||+|++++|+++ =..+++...
T Consensus 404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~~---------------- 467 (516)
T KOG1033|consen 404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERIA---------------- 467 (516)
T ss_pred eecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHHH----------------
Confidence 8776443 2234466789999999999999999999999999999999997 233332210
Q ss_pred cHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 001838 937 SVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIV 986 (1007)
Q Consensus 937 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl 986 (1007)
...++-|..+ ... .-...++-..++.+++.+.|.+||++.++.
T Consensus 468 t~~d~r~g~i-p~~------~~~d~p~e~~ll~~lls~~p~~RP~~~~~~ 510 (516)
T KOG1033|consen 468 TLTDIRDGII-PPE------FLQDYPEEYTLLQQLLSPSPEERPSAIEVA 510 (516)
T ss_pred hhhhhhcCCC-ChH------HhhcCcHHHHHHHHhcCCCcccCchHHHHh
Confidence 0011111111 000 000112346788899999999999655543
No 445
>PRK10345 hypothetical protein; Provisional
Probab=99.45 E-value=4.5e-13 Score=137.09 Aligned_cols=117 Identities=15% Similarity=0.233 Sum_probs=90.0
Q ss_pred ccccceecccCceEEEEEEEcCCceEEEEEechhhHHHHHHHHHHHHHHHhc-----CCCceeEEEEEEecCC---e-eE
Q 001838 728 FSKNNLLGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRI-----RHRNLVKIISACSNDD---F-KA 798 (1007)
Q Consensus 728 ~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~H~niv~l~~~~~~~~---~-~~ 798 (1007)
+...+.||+|+||.||. +++....+||++........+.+.+|+.+++++ .||||++++|++.++. . ..
T Consensus 4 L~~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~ 81 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD 81 (210)
T ss_pred cCCcceecCCCceEEEE--CCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence 34568899999999996 443333479988765333456789999999999 5799999999998863 3 34
Q ss_pred EEEEe--cCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHH-HHHHhcCCCCceecccc
Q 001838 799 LIMEY--MPNGSLENRLYSGTCMLDIFQRLNIMIDVALAL-EYLHFGHSTPIIHYMVA 853 (1007)
Q Consensus 799 lv~E~--~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l-~yLH~~~~~~ivH~~~~ 853 (1007)
+|+|| +++|+|.+++.+.. ++.. ..++.+++.++ +|| |+.+|+|||++
T Consensus 82 ~I~e~~G~~~~tL~~~l~~~~--~~e~--~~~~~~~L~~l~~yL---h~~~IvhrDlK 132 (210)
T PRK10345 82 VIADFDGKPSITLTEFAEQCR--YEED--VAQLRQLLKKLKRYL---LDNRIVTMELK 132 (210)
T ss_pred EEecCCCCcchhHHHHHHccc--ccHh--HHHHHHHHHHHHHHH---HHCCEeecCCC
Confidence 78999 66899999997642 5554 35677888787 899 67889999874
No 446
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.44 E-value=5.3e-15 Score=161.43 Aligned_cols=175 Identities=34% Similarity=0.549 Sum_probs=102.3
Q ss_pred ccCCCcEEEccCCeeccccchhhhhccccCccccCCCccCCCCchhhhcccccceeecccccccCCCCCCCCCcccCcee
Q 001838 410 NLSNLLLLDLGGNKLTGSIPVTFSRLLNLQGLGLAFNKLARSIPDEICHLAKLDKLILHGNKFSGAIPSCSGNLTSLRAL 489 (1007)
Q Consensus 410 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 489 (1007)
.++--...||+.|++. .+|..+..+..|+.+.|.+|.+. .+|..++++..|.+|||+.|+++ .+|..+..++ |+.|
T Consensus 73 ~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvl 148 (722)
T KOG0532|consen 73 DLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVL 148 (722)
T ss_pred cccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeE
Confidence 3445566777777776 56767777777777777777764 46666677777777777777776 4444444443 6666
Q ss_pred ecCCcccccCCCcccccccccccccCCCCCcCCCCccccccccccceEeCccccCCCCccccccCCCCccEEeccccccc
Q 001838 490 YLGSNRFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRNNLSGDIPITIGGLKNLQKLFLANNRLE 569 (1007)
Q Consensus 490 ~Ls~N~l~~~~p~~~~~l~~L~~Ldls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 569 (1007)
.+++|+++ .+|..++.+..|..||. |.|.|. .+|..++++.+|+.|++..|++.
T Consensus 149 i~sNNkl~-~lp~~ig~~~tl~~ld~------------------------s~nei~-slpsql~~l~slr~l~vrRn~l~ 202 (722)
T KOG0532|consen 149 IVSNNKLT-SLPEEIGLLPTLAHLDV------------------------SKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE 202 (722)
T ss_pred EEecCccc-cCCcccccchhHHHhhh------------------------hhhhhh-hchHHhhhHHHHHHHHHhhhhhh
Confidence 66666665 34444444444444444 455444 45555555555555555555554
Q ss_pred cccCccCcCCCCCCEEECCCCcccccCCcchhhhcCCCeeeCcCCccc
Q 001838 570 GPIPESFSGLSSLEILDLSKNKISGVIPTSLEKLLYLKKLNLSFNKLE 617 (1007)
Q Consensus 570 ~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~ls~N~l~ 617 (1007)
..|+.+..|+ |..||+|.|+++ .||-.|.+|..|++|-|.+|+|.
T Consensus 203 -~lp~El~~Lp-Li~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLq 247 (722)
T KOG0532|consen 203 -DLPEELCSLP-LIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQ 247 (722)
T ss_pred -hCCHHHhCCc-eeeeecccCcee-ecchhhhhhhhheeeeeccCCCC
Confidence 3344444433 555555555555 45555555555555555555554
No 447
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.43 E-value=6e-14 Score=164.04 Aligned_cols=198 Identities=23% Similarity=0.296 Sum_probs=128.7
Q ss_pred cccccccceecccCceEEEEEEEcC-CceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEe
Q 001838 725 TDRFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEY 803 (1007)
Q Consensus 725 ~~~~~~~~~ig~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~ 803 (1007)
.++|..++.|..|+||.||..+++. .+.+|.|+ .++.- ..+- ++.....|.+|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~ki-Nkq~l-----ilRn--ilt~a~npfvv------------------ 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKI-NKQNL-----ILRN--ILTFAGNPFVV------------------ 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhcc-cccch-----hhhc--cccccCCccee------------------
Confidence 3578889999999999999998774 67788843 32211 0000 33333344443
Q ss_pred cCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCC-----
Q 001838 804 MPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNG----- 866 (1007)
Q Consensus 804 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~----- 866 (1007)
|+-...++.-+ .++. +.+.+++|+ |+.+|+||+.+ |+.|||+++..-.
T Consensus 136 ---gDc~tllk~~g-~lPv--------dmvla~Eyl---h~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atn 200 (1205)
T KOG0606|consen 136 ---GDCATLLKNIG-PLPV--------DMVLAVEYL---HSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATN 200 (1205)
T ss_pred ---chhhhhcccCC-CCcc--------hhhHHhHhh---ccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccch
Confidence 34444443321 1222 127899999 88999999764 8999999986411
Q ss_pred ---CC-c---c-cccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccH
Q 001838 867 ---QD-Q---L-SMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISV 938 (1007)
Q Consensus 867 ---~~-~---~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~ 938 (1007)
.. . . -...+++||+.|+|||++....|...+|+|++|+|+||.+.|+.||++...++. +...+...
T Consensus 201 l~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeel-fg~visd~----- 274 (1205)
T KOG0606|consen 201 LKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEEL-FGQVISDD----- 274 (1205)
T ss_pred hhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHH-Hhhhhhhh-----
Confidence 00 0 0 011456899999999999999999999999999999999999999987533221 11111110
Q ss_pred HHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 001838 939 MEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRIN 981 (1007)
Q Consensus 939 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt 981 (1007)
+ ... +..+....++.+++.+.++.+|..|--
T Consensus 275 -------i-~wp----E~dea~p~Ea~dli~~LL~qnp~~Rlg 305 (1205)
T KOG0606|consen 275 -------I-EWP----EEDEALPPEAQDLIEQLLRQNPLCRLG 305 (1205)
T ss_pred -------c-ccc----ccCcCCCHHHHHHHHHHHHhChHhhcc
Confidence 0 000 001122446888889999999999853
No 448
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.43 E-value=9.3e-15 Score=159.54 Aligned_cols=193 Identities=29% Similarity=0.469 Sum_probs=167.4
Q ss_pred EEEeCCCCCccc-CcccccCCCCCCEEEcCCCCCCCCCCccccCcccCcEEeccCcccCCcchhhhhhcCCCCeecccCc
Q 001838 72 VLNISGFNLQGT-IPPQLGNLSSLETLDLSHNKLSGNIPSSIFNMHTLKLLDFRDNQLFGSLSSFIFNMSSMLGIDLSIN 150 (1007)
Q Consensus 72 ~L~L~~~~l~~~-~~~~l~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N 150 (1007)
.|.|++..+... .+..=-.|..-...||+.|++. .+|..+..+..|+.|.|++|.+. .+|..+.++..|++||||.|
T Consensus 54 ~l~Ls~rrlk~fpr~a~~~~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~N 131 (722)
T KOG0532|consen 54 RLLLSGRRLKEFPRGAASYDLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSN 131 (722)
T ss_pred ccccccchhhcCCCccccccccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccc
Confidence 456777666521 1112245677788999999998 79999999999999999999984 67888999999999999999
Q ss_pred ccCCCCchhHhhcCCCCcEEEccCccccccCCccccCCCCCcEEEcccccCCCCCCcccccccccceEEcccCcCCCCCC
Q 001838 151 RFSGELPANICKNLPNLKKLLLGRNMFHGKIPSTLSKCKQLEGLYLRFNNLSGAIPKEIGNLTKLKDIILNDNELRGEIP 230 (1007)
Q Consensus 151 ~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 230 (1007)
+++ .+|..++ .|+ |+.|-+++|+++ .+|..++.+..|..||.+.|++. .+|..++++.+|+.|.+..|++. .+|
T Consensus 132 qlS-~lp~~lC-~lp-Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp 205 (722)
T KOG0532|consen 132 QLS-HLPDGLC-DLP-LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLP 205 (722)
T ss_pred hhh-cCChhhh-cCc-ceeEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCC
Confidence 999 8999998 454 999999999998 78999999999999999999998 78899999999999999999999 778
Q ss_pred cccCCccccceeeccCccccccccccccCCCCCCeEEccccccc
Q 001838 231 QEMGNLPYLVRLTLATNNLVGVVPFTIFNMSTLKKLSLLENTLW 274 (1007)
Q Consensus 231 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 274 (1007)
.+++.| .|..||+|.|+++ .+|..|.+|+.|++|-|.+|.+.
T Consensus 206 ~El~~L-pLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLq 247 (722)
T KOG0532|consen 206 EELCSL-PLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQ 247 (722)
T ss_pred HHHhCC-ceeeeecccCcee-ecchhhhhhhhheeeeeccCCCC
Confidence 888855 5899999999998 68999999999999999999884
No 449
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.42 E-value=5.1e-13 Score=160.15 Aligned_cols=186 Identities=23% Similarity=0.235 Sum_probs=144.0
Q ss_pred HhcccccccceecccCceEEEEEEEcCCceEEEEEechhhHHHHHHHHHHHHHHHhcC---CCceeEEEEEEecCCeeEE
Q 001838 723 QATDRFSKNNLLGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIR---HRNLVKIISACSNDDFKAL 799 (1007)
Q Consensus 723 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~~~~~l 799 (1007)
.--+.|.+.+.||+|+||+||+|...+|+.||+|+=++.... +|.-=.+++.+++ -+-|..+..++.-.+.-++
T Consensus 695 ~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W---EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~l 771 (974)
T KOG1166|consen 695 VGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW---EFYICLQVMERLKPQMLPSIMHISSAHVFQNASVL 771 (974)
T ss_pred ecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCce---eeeehHHHHHhhchhhhcchHHHHHHHccCCccee
Confidence 334578888999999999999999888999999997765422 1111122333333 2345555555556667789
Q ss_pred EEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc-------------------ccceeec
Q 001838 800 IMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA-------------------HISDFSI 860 (1007)
Q Consensus 800 v~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~-------------------kl~DFGl 860 (1007)
|+||.+.|+|.+++. ....++|.-.+.++.|+++-+++| |..+|||.|++ +|+|||-
T Consensus 772 v~ey~~~Gtlld~~N-~~~~m~e~lv~~~~~qml~ive~l---H~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~ 847 (974)
T KOG1166|consen 772 VSEYSPYGTLLDLIN-TNKVMDEYLVMFFSCQMLRIVEHL---HAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGR 847 (974)
T ss_pred eeeccccccHHHhhc-cCCCCCchhhhHHHHHHHHHHHHH---HhcceecccCCcceeEeecccCCCCcccceEEEeccc
Confidence 999999999999998 444689999999999999999999 78899999875 7999999
Q ss_pred ceecCCCCcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCC
Q 001838 861 AKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKP 915 (1007)
Q Consensus 861 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p 915 (1007)
+-.+.--.....-...++|-++-.+|...+..++..+|-|.+..+++-|+.|+.-
T Consensus 848 siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~ 902 (974)
T KOG1166|consen 848 SIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM 902 (974)
T ss_pred ceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence 9765321111222456788889999999999999999999999999999999853
No 450
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.40 E-value=2.5e-12 Score=134.17 Aligned_cols=123 Identities=20% Similarity=0.323 Sum_probs=99.8
Q ss_pred ceecccCceEEEEEEEcCCceEEEEEechhh--------HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEe
Q 001838 732 NLLGIGSFGSVYVARLQDGMEVAVKVFHQRY--------ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEY 803 (1007)
Q Consensus 732 ~~ig~G~~g~Vy~~~~~~g~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~ 803 (1007)
+.||+|++|.||+|.. +|..|+||+..... ......+.+|++++.+++|++|.....++...+..++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5789999999999987 57789999765321 11235688999999999999998877777777788999999
Q ss_pred cCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc-----------ccceeeccee
Q 001838 804 MPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA-----------HISDFSIAKF 863 (1007)
Q Consensus 804 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~-----------kl~DFGla~~ 863 (1007)
++|++|.+++.... + .+..++.+++.++.++ |..+++|+|+. +++|||.++.
T Consensus 81 ~~G~~L~~~~~~~~----~-~~~~i~~~i~~~l~~l---H~~~i~H~Dl~p~Nil~~~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSNG----M-EELELSREIGRLVGKL---HSAGIIHGDLTTSNMILSGGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhcc----H-HHHHHHHHHHHHHHHH---HhCCcccCCCCcccEEEECCCEEEEECCcccC
Confidence 99999999986532 2 7788999999999999 57789999763 5788887764
No 451
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.39 E-value=1e-12 Score=138.66 Aligned_cols=219 Identities=19% Similarity=0.224 Sum_probs=133.3
Q ss_pred cccccceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCC-----------CceeEEEEE-
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRH-----------RNLVKIISA- 790 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H-----------~niv~l~~~- 790 (1007)
.+...+.||.|+++.||.+++. +|+++|||++.... ....+++.+|.-....+.+ +-++.+--.
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 3456789999999999999987 48999999885322 2345667776655544332 112211111
Q ss_pred -------EecC---C-----eeEEEEEecCCCChhHhhh---cCCC---CCCHHHHHHHHHHHHHHHHHHHhcCCCCcee
Q 001838 791 -------CSND---D-----FKALIMEYMPNGSLENRLY---SGTC---MLDIFQRLNIMIDVALALEYLHFGHSTPIIH 849 (1007)
Q Consensus 791 -------~~~~---~-----~~~lv~E~~~~gsL~~~l~---~~~~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH 849 (1007)
+... . ..+++|+-+. ++|.+++. .... .+....+..+..|+++.+++| |..++||
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~L---h~~GlVH 168 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANL---HSYGLVH 168 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHH---HHTTEEE
T ss_pred EcCCCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHH---hhcceEe
Confidence 1111 1 1357788774 58888764 2211 234456677789999999999 6788999
Q ss_pred cccc------------ccceeecceecCCCCcccccccccCCccccccccccc--------CCCCchhhHHHHHHHHHHH
Q 001838 850 YMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQ--------GRVSTRGDVYSYGIMLMET 909 (1007)
Q Consensus 850 ~~~~------------kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DvwS~Gvil~el 909 (1007)
.++. +++||+....... .. .....+..|.+||.... -.++.+.|.|++|+++|.|
T Consensus 169 gdi~~~nfll~~~G~v~Lg~F~~~~r~g~--~~---~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~l 243 (288)
T PF14531_consen 169 GDIKPENFLLDQDGGVFLGDFSSLVRAGT--RY---RCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSL 243 (288)
T ss_dssp ST-SGGGEEE-TTS-EEE--GGGEEETTE--EE---EGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHH
T ss_pred cccceeeEEEcCCCCEEEcChHHHeecCc--ee---eccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHH
Confidence 8764 7999987765432 11 11234578999997543 2478999999999999999
Q ss_pred HhCCCCCCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCC
Q 001838 910 FTGKKPTDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKR 979 (1007)
Q Consensus 910 ltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R 979 (1007)
.+|+.||+.......... +-. ... +.++.+.+|+..+|+++|.+|
T Consensus 244 WC~~lPf~~~~~~~~~~~---------------~f~---------~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 244 WCGRLPFGLSSPEADPEW---------------DFS---------RCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHSS-STCCCGGGSTSGG---------------GGT---------TSS----HHHHHHHHHHT-SSGGGS
T ss_pred HHccCCCCCCCccccccc---------------cch---------hcC-CcCHHHHHHHHHHccCCcccC
Confidence 999999985432211100 000 001 235578999999999999988
No 452
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.36 E-value=5.8e-12 Score=149.78 Aligned_cols=130 Identities=16% Similarity=0.232 Sum_probs=102.5
Q ss_pred HHhcccccccceecccCceEEEEEEEcCCceEEEEEe-chh-------hHHHHHHHHHHHHHHHhcCCCceeEEEEEEec
Q 001838 722 LQATDRFSKNNLLGIGSFGSVYVARLQDGMEVAVKVF-HQR-------YERALKSFQDECEVMKRIRHRNLVKIISACSN 793 (1007)
Q Consensus 722 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~~-~~~-------~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 793 (1007)
......|...+.||+|+||+||+|.+.+. .+++|+. .+. .....+++.+|++++++++|++|+....++..
T Consensus 329 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~-~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~ 407 (535)
T PRK09605 329 EEVKRRKIPDHLIGKGAEADIKKGEYLGR-DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVD 407 (535)
T ss_pred cccccccCccceeccCCcEEEEEEeecCc-cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEe
Confidence 33445567789999999999999987644 4444432 211 11223568899999999999999988888887
Q ss_pred CCeeEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc-----------ccceeecce
Q 001838 794 DDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA-----------HISDFSIAK 862 (1007)
Q Consensus 794 ~~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~-----------kl~DFGla~ 862 (1007)
.+..++||||+++++|.+++. ....++.++++++.|| |+.+++|||++ +++|||+++
T Consensus 408 ~~~~~lv~E~~~g~~L~~~l~---------~~~~~~~~i~~~L~~l---H~~giiHrDlkp~NILl~~~~~~liDFGla~ 475 (535)
T PRK09605 408 PEEKTIVMEYIGGKDLKDVLE---------GNPELVRKVGEIVAKL---HKAGIVHGDLTTSNFIVRDDRLYLIDFGLGK 475 (535)
T ss_pred CCCCEEEEEecCCCcHHHHHH---------HHHHHHHHHHHHHHHH---HhCCCccCCCChHHEEEECCcEEEEeCcccc
Confidence 778899999999999998875 3567899999999999 57899999874 789999998
Q ss_pred ec
Q 001838 863 FL 864 (1007)
Q Consensus 863 ~~ 864 (1007)
..
T Consensus 476 ~~ 477 (535)
T PRK09605 476 YS 477 (535)
T ss_pred cC
Confidence 64
No 453
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.32 E-value=2.1e-12 Score=148.51 Aligned_cols=214 Identities=29% Similarity=0.445 Sum_probs=148.8
Q ss_pred ccccceEeCCCCCcEE---EEEeCCCCCcccCcccccCCCCCCEEEcCCCCCCCCCCccccCcc-cCcEEeccCcccCCc
Q 001838 56 CSWIGITCGVNSHKVI---VLNISGFNLQGTIPPQLGNLSSLETLDLSHNKLSGNIPSSIFNMH-TLKLLDFRDNQLFGS 131 (1007)
Q Consensus 56 C~w~gv~c~~~~~~v~---~L~L~~~~l~~~~~~~l~~l~~L~~LdLs~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~ 131 (1007)
+.+.+..+... ... .++++.+.+... ...+..++.++.|++.+|.++ .+|.....++ +|+.|++++|++...
T Consensus 80 ~~~l~~~~~~~--~~~~~~~l~~~~~~~~~~-~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~~l 155 (394)
T COG4886 80 ISSLDGSENLL--NLLPLPSLDLNLNRLRSN-ISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIESL 155 (394)
T ss_pred ccccccccccc--CCCCCceeeccccccccC-chhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchhhh
Confidence 45555555432 222 467777766433 233445577888888888887 5666666674 888888888887533
Q ss_pred chhhhhhcCCCCeecccCcccCCCCchhHhhcCCCCcEEEccCccccccCCccccCCCCCcEEEcccccCCCCCCccccc
Q 001838 132 LSSFIFNMSSMLGIDLSINRFSGELPANICKNLPNLKKLLLGRNMFHGKIPSTLSKCKQLEGLYLRFNNLSGAIPKEIGN 211 (1007)
Q Consensus 132 ~~~~~~~l~~L~~LdLs~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 211 (1007)
|..+.++++|+.|++++|+++ .+|.... .+++|+.|++++|+++ .+|.....+..|++|++++|.+. ..+..+.+
T Consensus 156 -~~~~~~l~~L~~L~l~~N~l~-~l~~~~~-~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~ 230 (394)
T COG4886 156 -PSPLRNLPNLKNLDLSFNDLS-DLPKLLS-NLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSN 230 (394)
T ss_pred -hhhhhccccccccccCCchhh-hhhhhhh-hhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhh
Confidence 356777888888888888887 6776553 5778888888888887 56666566666888888888543 45666777
Q ss_pred ccccceEEcccCcCCCCCCcccCCccccceeeccCccccccccccccCCCCCCeEEcccccccCcCCchh
Q 001838 212 LTKLKDIILNDNELRGEIPQEMGNLPYLVRLTLATNNLVGVVPFTIFNMSTLKKLSLLENTLWGSLPSRI 281 (1007)
Q Consensus 212 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~lp~~~ 281 (1007)
+.++..+.+.+|++. .++..++.+++++.|++++|.++.+.+ +..+.+++.|++++|.+...+|...
T Consensus 231 ~~~l~~l~l~~n~~~-~~~~~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~~~ 297 (394)
T COG4886 231 LKNLSGLELSNNKLE-DLPESIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALPLIA 297 (394)
T ss_pred cccccccccCCceee-eccchhccccccceecccccccccccc--ccccCccCEEeccCccccccchhhh
Confidence 788888888888877 346667777778888888888876554 6777777777777777765555443
No 454
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.31 E-value=7.8e-12 Score=129.06 Aligned_cols=120 Identities=18% Similarity=0.334 Sum_probs=94.4
Q ss_pred eecccCceEEEEEEEcCCceEEEEEechhh--------HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEec
Q 001838 733 LLGIGSFGSVYVARLQDGMEVAVKVFHQRY--------ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYM 804 (1007)
Q Consensus 733 ~ig~G~~g~Vy~~~~~~g~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~ 804 (1007)
.||+|+||+||+|.+ +|..|++|+..... ....+++.+|++++.+++|+++.....++...+..++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 389999999999985 57889999864321 122466789999999999887665555556666779999999
Q ss_pred CCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc-----------cccceeecceec
Q 001838 805 PNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV-----------AHISDFSIAKFL 864 (1007)
Q Consensus 805 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~-----------~kl~DFGla~~~ 864 (1007)
+|++|.+.+..... .++.++++++.++ |+.+++|+|+ +++.|||+++..
T Consensus 80 ~g~~l~~~~~~~~~--------~~~~~i~~~l~~l---H~~gi~H~Dl~~~Nil~~~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 80 EGKPLKDVIEEGND--------ELLREIGRLVGKL---HKAGIVHGDLTTSNIIVRDDKLYLIDFGLGKYS 139 (199)
T ss_pred CCccHHHHHhhcHH--------HHHHHHHHHHHHH---HHCCeecCCCCcceEEEECCcEEEEECCCCcCC
Confidence 99999988754321 7899999999999 6789999876 378999988753
No 455
>smart00090 RIO RIO-like kinase.
Probab=99.30 E-value=1.3e-11 Score=129.80 Aligned_cols=131 Identities=18% Similarity=0.142 Sum_probs=97.8
Q ss_pred ccccccceecccCceEEEEEE--EcCCceEEEEEechhhH------------------------HHHHHHHHHHHHHHhc
Q 001838 726 DRFSKNNLLGIGSFGSVYVAR--LQDGMEVAVKVFHQRYE------------------------RALKSFQDECEVMKRI 779 (1007)
Q Consensus 726 ~~~~~~~~ig~G~~g~Vy~~~--~~~g~~vavK~~~~~~~------------------------~~~~~~~~E~~~l~~l 779 (1007)
..|+..+.||+|+||.||+|. ..+|+.||||+++.... .....+..|++++.++
T Consensus 28 ~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L 107 (237)
T smart00090 28 ILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL 107 (237)
T ss_pred chHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 347778999999999999998 55799999999874310 0123467899999999
Q ss_pred CCC--ceeEEEEEEecCCeeEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC-ceecccc---
Q 001838 780 RHR--NLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTP-IIHYMVA--- 853 (1007)
Q Consensus 780 ~H~--niv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~-ivH~~~~--- 853 (1007)
.+. .+.+++++ ...++||||++++++........ ..+......++.|++.++.|| |..+ |+|+|++
T Consensus 108 ~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~L---H~~g~iiH~Dikp~N 179 (237)
T smart00090 108 YEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDV-EPEEEEEFELYDDILEEMRKL---YKEGELVHGDLSEYN 179 (237)
T ss_pred HhcCCCCCeeeEe----cCceEEEEEecCCcccccccccC-CcchHHHHHHHHHHHHHHHHH---HhcCCEEeCCCChhh
Confidence 753 34444543 23589999999988876653322 345556678999999999999 5677 9999763
Q ss_pred --------ccceeecceec
Q 001838 854 --------HISDFSIAKFL 864 (1007)
Q Consensus 854 --------kl~DFGla~~~ 864 (1007)
+++|||.|...
T Consensus 180 Ili~~~~i~LiDFg~a~~~ 198 (237)
T smart00090 180 ILVHDGKVVIIDVSQSVEL 198 (237)
T ss_pred EEEECCCEEEEEChhhhcc
Confidence 78999988754
No 456
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.29 E-value=2.3e-13 Score=160.61 Aligned_cols=246 Identities=21% Similarity=0.231 Sum_probs=181.6
Q ss_pred cccccccceecccCceEEEEEEEc--CCceEEEEEechhh--HHHHHHHHHHHHHHHhcC-CCceeEEEEEEecCCeeEE
Q 001838 725 TDRFSKNNLLGIGSFGSVYVARLQ--DGMEVAVKVFHQRY--ERALKSFQDECEVMKRIR-HRNLVKIISACSNDDFKAL 799 (1007)
Q Consensus 725 ~~~~~~~~~ig~G~~g~Vy~~~~~--~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~l 799 (1007)
...|...+.||+|+|+.|-..... ....+|+|.+.... ....++...|..+=+.+. |+|++++++...+.+..++
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 346777888999999999888754 24557777665432 233344556777777776 9999999999999999999
Q ss_pred EEEecCCCChhHhh-hcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc-------------cccceeecceecC
Q 001838 800 IMEYMPNGSLENRL-YSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV-------------AHISDFSIAKFLN 865 (1007)
Q Consensus 800 v~E~~~~gsL~~~l-~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~-------------~kl~DFGla~~~~ 865 (1007)
++||..+|++.+-+ .......+.....++..|+..++.|+|. ..++.|+++ .|++|||+|....
T Consensus 99 ~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~--~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~ 176 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHP--ENGVTHRDIKPSNSLLDESGSALKIADFGLATAYR 176 (601)
T ss_pred ccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCc--ccccccCCCCCccchhccCCCcccCCCchhhcccc
Confidence 99999999999988 5544345666777899999999999941 777888755 3799999998876
Q ss_pred C-CCcccccccccC-CcccccccccccC-CCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHHh
Q 001838 866 G-QDQLSMQTQTLA-TIGYMAPEYGVQG-RVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEVI 942 (1007)
Q Consensus 866 ~-~~~~~~~~~~~g-t~~y~aPE~~~~~-~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 942 (1007)
. ..........+| ++.|+|||...+. ...+..|+||.|+++.-+++|..|++...........|........
T Consensus 177 ~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~----- 251 (601)
T KOG0590|consen 177 NKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFT----- 251 (601)
T ss_pred ccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccccccc-----
Confidence 5 333333445678 9999999998874 4577899999999999999999999876555554555543321000
Q ss_pred hhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 943 DTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 943 d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
. ...........++..+++..+|+.|.+.+++...
T Consensus 252 ---~--------~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d 286 (601)
T KOG0590|consen 252 ---Q--------LPWNSISDQAHDLLHKILKENPSNRLSIEELKLD 286 (601)
T ss_pred ---c--------CccccCChhhhhcccccccCCchhcccccccccc
Confidence 0 0011112356788888999999999998887654
No 457
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.24 E-value=3.3e-11 Score=124.05 Aligned_cols=133 Identities=22% Similarity=0.184 Sum_probs=98.4
Q ss_pred HHHHHhcccccccceecccCceEEEEEEEcCCceEEEEEechhhH----------------------HHHHHHHHHHHHH
Q 001838 719 HELLQATDRFSKNNLLGIGSFGSVYVARLQDGMEVAVKVFHQRYE----------------------RALKSFQDECEVM 776 (1007)
Q Consensus 719 ~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~~~~~~~----------------------~~~~~~~~E~~~l 776 (1007)
.++.+.-..|...+.||+|+||.||+|..++|+.||||++..... .....+..|..++
T Consensus 8 ~~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 87 (198)
T cd05144 8 HTLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAAL 87 (198)
T ss_pred HHHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHH
Confidence 344444444778899999999999999988899999998753210 0112367899999
Q ss_pred HhcCCCc--eeEEEEEEecCCeeEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceeccc--
Q 001838 777 KRIRHRN--LVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMV-- 852 (1007)
Q Consensus 777 ~~l~H~n--iv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~-- 852 (1007)
.++.|++ +.+.++. ...++||||+++++|.+.... ....+++.+++.++.++| ..+|+|+|+
T Consensus 88 ~~l~~~~i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~-------~~~~~~~~~i~~~l~~lh---~~gi~H~Dl~p 153 (198)
T cd05144 88 KALYEEGFPVPKPIDW----NRHAVVMEYIDGVELYRVRVL-------EDPEEVLDEILEEIVKAY---KHGIIHGDLSE 153 (198)
T ss_pred HHHHHcCCCCCceeec----CCceEEEEEeCCcchhhcccc-------ccHHHHHHHHHHHHHHHH---HCCCCcCCCCc
Confidence 9998874 4444442 345899999999999765431 234568899999999995 588999976
Q ss_pred ----------cccceeecceecC
Q 001838 853 ----------AHISDFSIAKFLN 865 (1007)
Q Consensus 853 ----------~kl~DFGla~~~~ 865 (1007)
++|+|||.+....
T Consensus 154 ~Nill~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 154 FNILVDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred ccEEEcCCCcEEEEECCccccCC
Confidence 3899999997553
No 458
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.22 E-value=9.4e-12 Score=143.10 Aligned_cols=182 Identities=40% Similarity=0.569 Sum_probs=96.9
Q ss_pred hccCCCcEEEccCCeeccccchhhhhcc-ccCccccCCCccCCCCchhhhcccccceeecccccccCCCCCCCCCcccCc
Q 001838 409 SNLSNLLLLDLGGNKLTGSIPVTFSRLL-NLQGLGLAFNKLARSIPDEICHLAKLDKLILHGNKFSGAIPSCSGNLTSLR 487 (1007)
Q Consensus 409 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 487 (1007)
..++.++.|++.+|.++ .+|.....+. +|+.|++++|++.. +|..+..+++|+.|++++|+++ .+|...+.+++|+
T Consensus 113 ~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~~-l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~ 189 (394)
T COG4886 113 LELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIES-LPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLN 189 (394)
T ss_pred hcccceeEEecCCcccc-cCccccccchhhcccccccccchhh-hhhhhhccccccccccCCchhh-hhhhhhhhhhhhh
Confidence 33455666666666665 3344444442 55556666665542 3334455555555555555555 2333333445555
Q ss_pred eeecCCcccccCCCcccccccccccccCCCCCcCCCCccccccccccceEeCccccCCCCccccccCCCCccEEeccccc
Q 001838 488 ALYLGSNRFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRNNLSGDIPITIGGLKNLQKLFLANNR 567 (1007)
Q Consensus 488 ~L~Ls~N~l~~~~p~~~~~l~~L~~Ldls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 567 (1007)
.|++++|+++. +|..+ +.+..|++|++++|++. .++..+..++++..|.+++|+
T Consensus 190 ~L~ls~N~i~~-l~~~~------------------------~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~ 243 (394)
T COG4886 190 NLDLSGNKISD-LPPEI------------------------ELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNK 243 (394)
T ss_pred heeccCCcccc-Cchhh------------------------hhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCce
Confidence 55555555542 33332 33334555555555432 445555666666666666666
Q ss_pred cccccCccCcCCCCCCEEECCCCcccccCCcchhhhcCCCeeeCcCCccccccCC
Q 001838 568 LEGPIPESFSGLSSLEILDLSKNKISGVIPTSLEKLLYLKKLNLSFNKLEGEIPR 622 (1007)
Q Consensus 568 l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~ip~ 622 (1007)
+. .+|..++.+++|+.|++++|+++... . +..+.+++.|++++|.+....|.
T Consensus 244 ~~-~~~~~~~~l~~l~~L~~s~n~i~~i~-~-~~~~~~l~~L~~s~n~~~~~~~~ 295 (394)
T COG4886 244 LE-DLPESIGNLSNLETLDLSNNQISSIS-S-LGSLTNLRELDLSGNSLSNALPL 295 (394)
T ss_pred ee-eccchhccccccceeccccccccccc-c-ccccCccCEEeccCccccccchh
Confidence 65 23555566666666666666666332 2 55666666666666666654443
No 459
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.17 E-value=7.3e-11 Score=115.68 Aligned_cols=124 Identities=19% Similarity=0.224 Sum_probs=102.1
Q ss_pred ccceecccCceEEEEEEEcCCceEEEEEechhhHHHHHHHHHHHHHHHhcCC--CceeEEEEEEecCCeeEEEEEecCCC
Q 001838 730 KNNLLGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRH--RNLVKIISACSNDDFKALIMEYMPNG 807 (1007)
Q Consensus 730 ~~~~ig~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H--~niv~l~~~~~~~~~~~lv~E~~~~g 807 (1007)
+.+.||+|.++.||++...+ ..++||....... ...+.+|+.+++.++| .+++++++++...+..+++|||++++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~ 78 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE 78 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence 35779999999999999864 7899999876543 4578899999999976 59999999988888899999999998
Q ss_pred ChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceec
Q 001838 808 SLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFL 864 (1007)
Q Consensus 808 sL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~ 864 (1007)
.+..+ +......++.+++++++++|..+..+++|+|+. ++.|||.++..
T Consensus 79 ~~~~~--------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~ 139 (155)
T cd05120 79 TLDEV--------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYG 139 (155)
T ss_pred ecccC--------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCC
Confidence 77654 456677789999999999987666789998753 67888877643
No 460
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.13 E-value=1.2e-11 Score=131.90 Aligned_cols=214 Identities=21% Similarity=0.303 Sum_probs=131.3
Q ss_pred CCCCCCEEEcCCCCCCCCCC--ccccCcccCcEEeccCcccCCcch--hhhhhcCCCCeecccCcccCCCCchhHhhcCC
Q 001838 90 NLSSLETLDLSHNKLSGNIP--SSIFNMHTLKLLDFRDNQLFGSLS--SFIFNMSSMLGIDLSINRFSGELPANICKNLP 165 (1007)
Q Consensus 90 ~l~~L~~LdLs~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~~~~~--~~~~~l~~L~~LdLs~N~l~~~ip~~~~~~l~ 165 (1007)
++++|+...|.+..+. ..+ +....+++++.||||+|-+....+ .....|++|+.|+||.|++.-......-..++
T Consensus 119 n~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~ 197 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLS 197 (505)
T ss_pred hHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhh
Confidence 4667888888777665 222 356678888888888888876544 34567888888888888887555555545677
Q ss_pred CCcEEEccCcccccc-CCccccCCCCCcEEEcccccCCCCCCcccccccccceEEcccCcCCCCCC--cccCCcccccee
Q 001838 166 NLKKLLLGRNMFHGK-IPSTLSKCKQLEGLYLRFNNLSGAIPKEIGNLTKLKDIILNDNELRGEIP--QEMGNLPYLVRL 242 (1007)
Q Consensus 166 ~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p--~~~~~l~~L~~L 242 (1007)
.|+.|.|+.|.|+.. +-.....+++|+.|+|.+|..-.........+..|+.|+|++|++- ..+ ...+.++.|..|
T Consensus 198 ~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li-~~~~~~~~~~l~~L~~L 276 (505)
T KOG3207|consen 198 HLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLI-DFDQGYKVGTLPGLNQL 276 (505)
T ss_pred hhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCccc-ccccccccccccchhhh
Confidence 788888888887732 1122456778888888888533333344556677888888888776 333 335667777777
Q ss_pred eccCccccccccccccCCCCCCeEEcccccccCcCCchhhcCCCCCcEEeccCCCCCCCC-CccccccCCCCEEEecCCC
Q 001838 243 TLATNNLVGVVPFTIFNMSTLKKLSLLENTLWGSLPSRIDLSLPNVEFLNLGTNRFSGNI-PSSITNASKLTVFQLRGNS 321 (1007)
Q Consensus 243 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~lp~~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~ 321 (1007)
.++.+.+..+--... .++ .....+++|++|+++.|++...- -..+..+.+|+.|....|.
T Consensus 277 nls~tgi~si~~~d~---~s~----------------~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ 337 (505)
T KOG3207|consen 277 NLSSTGIASIAEPDV---ESL----------------DKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNY 337 (505)
T ss_pred hccccCcchhcCCCc---cch----------------hhhcccccceeeecccCccccccccchhhccchhhhhhccccc
Confidence 777776654321111 000 00123566666666666664210 1123334556666666666
Q ss_pred cCC
Q 001838 322 FSG 324 (1007)
Q Consensus 322 l~~ 324 (1007)
++.
T Consensus 338 ln~ 340 (505)
T KOG3207|consen 338 LNK 340 (505)
T ss_pred ccc
Confidence 653
No 461
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.07 E-value=2.4e-11 Score=129.61 Aligned_cols=188 Identities=29% Similarity=0.361 Sum_probs=98.3
Q ss_pred hcCCCCcEEEccCccccccCC--ccccCCCCCcEEEcccccCCCCCCccc-ccccccceEEcccCcCCCC-CCcccCCcc
Q 001838 162 KNLPNLKKLLLGRNMFHGKIP--STLSKCKQLEGLYLRFNNLSGAIPKEI-GNLTKLKDIILNDNELRGE-IPQEMGNLP 237 (1007)
Q Consensus 162 ~~l~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~-~p~~~~~l~ 237 (1007)
..+++++.||||+|-|+...| .....|++|+.|+|+.|.+........ ..+++|+.|.|+.+.|+.. +-.....+|
T Consensus 143 k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~fP 222 (505)
T KOG3207|consen 143 KILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTFP 222 (505)
T ss_pred hhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhCC
Confidence 345555555555555442111 123345555555555555542211111 1345666667766666521 122234567
Q ss_pred ccceeeccCccccccccccccCCCCCCeEEcccccccCcCCchhhcCCCCCcEEeccCCCCCCCC-Ccc-----ccccCC
Q 001838 238 YLVRLTLATNNLVGVVPFTIFNMSTLKKLSLLENTLWGSLPSRIDLSLPNVEFLNLGTNRFSGNI-PSS-----ITNASK 311 (1007)
Q Consensus 238 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~lp~~~~~~l~~L~~L~Ls~N~l~~~~-p~~-----~~~l~~ 311 (1007)
+|+.|+|..|............++.|+.|||++|++...-.-.....+|.|+.|+++.+.++..- |+. ...+++
T Consensus 223 sl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~k 302 (505)
T KOG3207|consen 223 SLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPK 302 (505)
T ss_pred cHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhhccccCcchhcCCCccchhhhccccc
Confidence 77777777775444444445556667777777776632211112235677777777777666432 221 234567
Q ss_pred CCEEEecCCCcCCCC-CcccccccccccccccccccccC
Q 001838 312 LTVFQLRGNSFSGFI-PNTIGNLRNLEFLNIADNYLTSS 349 (1007)
Q Consensus 312 L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~ 349 (1007)
|++|+++.|++.... -..+..+++|+.|.+..|.++..
T Consensus 303 L~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln~e 341 (505)
T KOG3207|consen 303 LEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLNKE 341 (505)
T ss_pred ceeeecccCccccccccchhhccchhhhhhccccccccc
Confidence 777777777774221 12334455666666666666653
No 462
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.05 E-value=1.4e-10 Score=113.95 Aligned_cols=110 Identities=29% Similarity=0.351 Sum_probs=28.4
Q ss_pred ccCCCCCCEEEcCCCCCCCCCCcccc-CcccCcEEeccCcccCCcchhhhhhcCCCCeecccCcccCCCCchhHhhcCCC
Q 001838 88 LGNLSSLETLDLSHNKLSGNIPSSIF-NMHTLKLLDFRDNQLFGSLSSFIFNMSSMLGIDLSINRFSGELPANICKNLPN 166 (1007)
Q Consensus 88 l~~l~~L~~LdLs~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~ip~~~~~~l~~ 166 (1007)
+.+...+++|+|++|.|+.+ +.++ .+.+|+.|||++|+|+... .+..++.|++|++++|+|+ .+++.+...+++
T Consensus 15 ~~n~~~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~l~--~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~ 89 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITKLE--GLPGLPRLKTLDLSNNRIS-SISEGLDKNLPN 89 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S--T--T----TT--EEE--SS----S-CHHHHHH-TT
T ss_pred cccccccccccccccccccc--cchhhhhcCCCEEECCCCCCcccc--CccChhhhhhcccCCCCCC-ccccchHHhCCc
Confidence 33444567777777777632 2344 4566677777777665432 2444555666666666665 454444345666
Q ss_pred CcEEEccCccccccCC-ccccCCCCCcEEEcccccCC
Q 001838 167 LKKLLLGRNMFHGKIP-STLSKCKQLEGLYLRFNNLS 202 (1007)
Q Consensus 167 L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~ 202 (1007)
|++|+|++|+|...-. ..++.+++|++|+|.+|.++
T Consensus 90 L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 90 LQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp --EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred CCEEECcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 6666666666653211 23444555555555555544
No 463
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.04 E-value=2.1e-10 Score=118.01 Aligned_cols=189 Identities=24% Similarity=0.264 Sum_probs=124.2
Q ss_pred HHHhcCCCceeEEEEEEecC-----CeeEEEEEecCCCChhHhhhcC---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCC
Q 001838 775 VMKRIRHRNLVKIISACSND-----DFKALIMEYMPNGSLENRLYSG---TCMLDIFQRLNIMIDVALALEYLHFGHSTP 846 (1007)
Q Consensus 775 ~l~~l~H~niv~l~~~~~~~-----~~~~lv~E~~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ 846 (1007)
-+-.+.|.|||+++.|+.+. .+..++.|||+.|++.++|++- ...+......+++-||..||.|||. +.++
T Consensus 120 nllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs-~~Pp 198 (458)
T KOG1266|consen 120 NLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS-CDPP 198 (458)
T ss_pred HHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc-cCCc
Confidence 34456799999999998653 3578899999999999999752 2346666777899999999999986 7889
Q ss_pred ceecccc----ccceeecceecCC--CCcc--------cccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhC
Q 001838 847 IIHYMVA----HISDFSIAKFLNG--QDQL--------SMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTG 912 (1007)
Q Consensus 847 ivH~~~~----kl~DFGla~~~~~--~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG 912 (1007)
|+|.... -+.-=|+.+.-.. +... .......|-++|.|||+-.....+..+|||+||....||..|
T Consensus 199 iihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemail 278 (458)
T KOG1266|consen 199 IIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAIL 278 (458)
T ss_pred cccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHh
Confidence 9997432 2222233332110 0000 001123467899999998888888999999999999999988
Q ss_pred CCC-CCccccCcchHHHHHHhhcCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 913 KKP-TDEIFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 913 ~~p-~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
..- ...... . ...+.+...+...... .=.+++.+|++..|..||+|++.+.+
T Consensus 279 Eiq~tnseS~---~-----------~~ee~ia~~i~~len~----------lqr~~i~kcl~~eP~~rp~ar~llfH 331 (458)
T KOG1266|consen 279 EIQSTNSESK---V-----------EVEENIANVIIGLENG----------LQRGSITKCLEGEPNGRPDARLLLFH 331 (458)
T ss_pred eeccCCCcce---e-----------ehhhhhhhheeeccCc----------cccCcCcccccCCCCCCcchhhhhcC
Confidence 653 221100 0 0111111111111100 01346678999999999999998765
No 464
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.01 E-value=3.5e-10 Score=111.15 Aligned_cols=123 Identities=28% Similarity=0.314 Sum_probs=52.6
Q ss_pred cEEEEEeCCCCCcccCccccc-CCCCCCEEEcCCCCCCCCCCccccCcccCcEEeccCcccCCcchhhhhhcCCCCeecc
Q 001838 69 KVIVLNISGFNLQGTIPPQLG-NLSSLETLDLSHNKLSGNIPSSIFNMHTLKLLDFRDNQLFGSLSSFIFNMSSMLGIDL 147 (1007)
Q Consensus 69 ~v~~L~L~~~~l~~~~~~~l~-~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdL 147 (1007)
+.+.|+|++|.|+.. +.++ .+.+|+.||||+|.|+.. + .+..++.|+.|++++|+|+...+.....+++|+.|+|
T Consensus 20 ~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~l-~-~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~~L~L 95 (175)
T PF14580_consen 20 KLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITKL-E-GLPGLPRLKTLDLSNNRISSISEGLDKNLPNLQELYL 95 (175)
T ss_dssp ------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---S-CHHHHHH-TT--EEE-
T ss_pred ccccccccccccccc--cchhhhhcCCCEEECCCCCCccc-c-CccChhhhhhcccCCCCCCccccchHHhCCcCCEEEC
Confidence 578899999999843 4566 588999999999999954 3 5888999999999999998775544467999999999
Q ss_pred cCcccCCCCchhHhhcCCCCcEEEccCccccccCCc----cccCCCCCcEEEc
Q 001838 148 SINRFSGELPANICKNLPNLKKLLLGRNMFHGKIPS----TLSKCKQLEGLYL 196 (1007)
Q Consensus 148 s~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~----~~~~l~~L~~L~L 196 (1007)
++|+|...-.-.....+++|++|+|.+|.++.. +. .+..+|+|+.||-
T Consensus 96 ~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~-~~YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 96 SNNKISDLNELEPLSSLPKLRVLSLEGNPVCEK-KNYRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp TTS---SCCCCGGGGG-TT--EEE-TT-GGGGS-TTHHHHHHHH-TT-SEETT
T ss_pred cCCcCCChHHhHHHHcCCCcceeeccCCcccch-hhHHHHHHHHcChhheeCC
Confidence 999997422223345799999999999999843 33 2566778887774
No 465
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.01 E-value=4.1e-11 Score=121.20 Aligned_cols=128 Identities=29% Similarity=0.289 Sum_probs=69.4
Q ss_pred CCCCEEEcCCCCCCCCCCccccCcccCcEEeccCcccCCcchhhhhhcCCCCeecccCcccCCCCchhHhhcCCCCcEEE
Q 001838 92 SSLETLDLSHNKLSGNIPSSIFNMHTLKLLDFRDNQLFGSLSSFIFNMSSMLGIDLSINRFSGELPANICKNLPNLKKLL 171 (1007)
Q Consensus 92 ~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~ip~~~~~~l~~L~~L~ 171 (1007)
+.|++||||+|.|+ .+.++..-++.++.|++|+|.|...-. +..|++|+.||||+|.++ .+.. +-..|-|.+.|.
T Consensus 284 q~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v~n--La~L~~L~~LDLS~N~Ls-~~~G-wh~KLGNIKtL~ 358 (490)
T KOG1259|consen 284 QELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTVQN--LAELPQLQLLDLSGNLLA-ECVG-WHLKLGNIKTLK 358 (490)
T ss_pred hhhhhccccccchh-hhhhhhhhccceeEEeccccceeeehh--hhhcccceEeecccchhH-hhhh-hHhhhcCEeeee
Confidence 46777777777777 566666667777777777777753322 555666666666666665 2222 222455566666
Q ss_pred ccCccccccCCccccCCCCCcEEEcccccCCCCC-CcccccccccceEEcccCcCC
Q 001838 172 LGRNMFHGKIPSTLSKCKQLEGLYLRFNNLSGAI-PKEIGNLTKLKDIILNDNELR 226 (1007)
Q Consensus 172 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~ 226 (1007)
|+.|.|... +.+.++-+|+.||+++|++.... -..+++++-|+++.|.+|.+.
T Consensus 359 La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~ 412 (490)
T KOG1259|consen 359 LAQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLA 412 (490)
T ss_pred hhhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcc
Confidence 666655421 23344445555555555554211 123444444444444444444
No 466
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=98.99 E-value=1.4e-09 Score=110.88 Aligned_cols=126 Identities=21% Similarity=0.254 Sum_probs=86.0
Q ss_pred cceecccCceEEEEEEEcCCceEEEEEechhhH--HHHHH----------------------HHHHHHHHHhcCCCc--e
Q 001838 731 NNLLGIGSFGSVYVARLQDGMEVAVKVFHQRYE--RALKS----------------------FQDECEVMKRIRHRN--L 784 (1007)
Q Consensus 731 ~~~ig~G~~g~Vy~~~~~~g~~vavK~~~~~~~--~~~~~----------------------~~~E~~~l~~l~H~n--i 784 (1007)
.+.||+|+||+||+|...+|+.||||++..... ..... ...|.+.+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 467999999999999988899999999864321 11111 135666677765433 4
Q ss_pred eEEEEEEecCCeeEEEEEecCCCChhHh-hhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc----------
Q 001838 785 VKIISACSNDDFKALIMEYMPNGSLENR-LYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA---------- 853 (1007)
Q Consensus 785 v~l~~~~~~~~~~~lv~E~~~~gsL~~~-l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~---------- 853 (1007)
.+.+++ ...++||||+++|.+... +.... .. .+...++.+++.++.++| .+.+|+|+|+.
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~--~~-~~~~~~~~~~~~~l~~lh--~~~~ivH~Dl~p~Nili~~~~ 152 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR--LL-EDPEELYDQILELMRKLY--REAGLVHGDLSEYNILVDDGK 152 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhh--hc-ccHHHHHHHHHHHHHHHh--hccCcCcCCCChhhEEEECCc
Confidence 445543 235899999999654321 11111 11 456789999999999995 23899999763
Q ss_pred -ccceeecceecC
Q 001838 854 -HISDFSIAKFLN 865 (1007)
Q Consensus 854 -kl~DFGla~~~~ 865 (1007)
+++|||.+....
T Consensus 153 ~~liDfg~a~~~~ 165 (187)
T cd05119 153 VYIIDVPQAVEID 165 (187)
T ss_pred EEEEECccccccc
Confidence 899999997553
No 467
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.95 E-value=1.5e-10 Score=133.19 Aligned_cols=173 Identities=34% Similarity=0.401 Sum_probs=80.0
Q ss_pred hccCCCcEEEccCCeeccccchhhhhccccCccccCCCccCCCCchhhhcccccceeecccccccCCCC-CCCCCcccCc
Q 001838 409 SNLSNLLLLDLGGNKLTGSIPVTFSRLLNLQGLGLAFNKLARSIPDEICHLAKLDKLILHGNKFSGAIP-SCSGNLTSLR 487 (1007)
Q Consensus 409 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~ 487 (1007)
..+.+|++|||++|+|+...+ +..+..|+.|++++|.++.. ..+..+.+|+.+++++|++...-+ . ...+.+++
T Consensus 115 ~~~~~L~~L~ls~N~I~~i~~--l~~l~~L~~L~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~ 189 (414)
T KOG0531|consen 115 SSLVNLQVLDLSFNKITKLEG--LSTLTLLKELNLSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLE 189 (414)
T ss_pred hhhhcchheeccccccccccc--hhhccchhhheeccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchH
Confidence 345555566666666554332 23333455555555555432 223334555555555555543222 1 23444555
Q ss_pred eeecCCcccccCCCcccccccccccccCCCCCcCCCCccccccccccceEeCccccCCCCccccccCCC--CccEEeccc
Q 001838 488 ALYLGSNRFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRNNLSGDIPITIGGLK--NLQKLFLAN 565 (1007)
Q Consensus 488 ~L~Ls~N~l~~~~p~~~~~l~~L~~Ldls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~Ls~ 565 (1007)
.+++++|.+... ..+..+..+..+ ++..|.++-.-+ +..+. .|+.+++++
T Consensus 190 ~l~l~~n~i~~i--~~~~~~~~l~~~------------------------~l~~n~i~~~~~--l~~~~~~~L~~l~l~~ 241 (414)
T KOG0531|consen 190 ELDLGGNSIREI--EGLDLLKKLVLL------------------------SLLDNKISKLEG--LNELVMLHLRELYLSG 241 (414)
T ss_pred HHhccCCchhcc--cchHHHHHHHHh------------------------hcccccceeccC--cccchhHHHHHHhccc
Confidence 555555554321 112222223333 444444431111 11111 255666666
Q ss_pred cccccccCccCcCCCCCCEEECCCCcccccCCcchhhhcCCCeeeCcCCccc
Q 001838 566 NRLEGPIPESFSGLSSLEILDLSKNKISGVIPTSLEKLLYLKKLNLSFNKLE 617 (1007)
Q Consensus 566 N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~ls~N~l~ 617 (1007)
|++. .++..+..+..+..||+++|+++.. ..+.....+..+.++.|++.
T Consensus 242 n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~ 290 (414)
T KOG0531|consen 242 NRIS-RSPEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLA 290 (414)
T ss_pred Cccc-cccccccccccccccchhhcccccc--ccccccchHHHhccCcchhc
Confidence 6665 3334455556666666666666643 22334445555566666654
No 468
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.91 E-value=1.7e-10 Score=132.83 Aligned_cols=200 Identities=27% Similarity=0.232 Sum_probs=89.3
Q ss_pred CCCCcEEEccCccccccCCccccCCCCCcEEEcccccCCCCCCcccccccccceEEcccCcCCCCCC-cccCCcccccee
Q 001838 164 LPNLKKLLLGRNMFHGKIPSTLSKCKQLEGLYLRFNNLSGAIPKEIGNLTKLKDIILNDNELRGEIP-QEMGNLPYLVRL 242 (1007)
Q Consensus 164 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L 242 (1007)
+++|++|+|++|+|+.+. .+..++.|+.|++++|.++.. ..+..+.+|+.+++++|++....+ . ...+.+++.+
T Consensus 117 ~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l 191 (414)
T KOG0531|consen 117 LVNLQVLDLSFNKITKLE--GLSTLTLLKELNLSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEEL 191 (414)
T ss_pred hhcchheecccccccccc--chhhccchhhheeccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHH
Confidence 444555555555544321 233334455555555554421 223334455555555555543222 1 3444555555
Q ss_pred eccCccccccccccccCCCCCCeEEcccccccCcCCchhhcCCC--CCcEEeccCCCCCCCCCccccccCCCCEEEecCC
Q 001838 243 TLATNNLVGVVPFTIFNMSTLKKLSLLENTLWGSLPSRIDLSLP--NVEFLNLGTNRFSGNIPSSITNASKLTVFQLRGN 320 (1007)
Q Consensus 243 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~lp~~~~~~l~--~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 320 (1007)
+++.|.+..+.. +..+..+..+++..|.+...-+.. .++ .|+.+++++|.+.. .+..+..+..+..|++++|
T Consensus 192 ~l~~n~i~~i~~--~~~~~~l~~~~l~~n~i~~~~~l~---~~~~~~L~~l~l~~n~i~~-~~~~~~~~~~l~~l~~~~n 265 (414)
T KOG0531|consen 192 DLGGNSIREIEG--LDLLKKLVLLSLLDNKISKLEGLN---ELVMLHLRELYLSGNRISR-SPEGLENLKNLPVLDLSSN 265 (414)
T ss_pred hccCCchhcccc--hHHHHHHHHhhcccccceeccCcc---cchhHHHHHHhcccCcccc-ccccccccccccccchhhc
Confidence 555555443221 122223333344444442111100 111 25566666666653 2234555666677777777
Q ss_pred CcCCCCCcccccccccccccccccccccCCCCccccccccccccccEEEccCCCCCC
Q 001838 321 SFSGFIPNTIGNLRNLEFLNIADNYLTSSTPELSFLSSLTNCQKIRVLILAGNPLDG 377 (1007)
Q Consensus 321 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~l~~ 377 (1007)
++... ..+.....+..+....|.+....... ..........++.+.+..|+...
T Consensus 266 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 319 (414)
T KOG0531|consen 266 RISNL--EGLERLPKLSELWLNDNKLALSEAIS-QEYITSAAPTLVTLTLELNPIRK 319 (414)
T ss_pred ccccc--ccccccchHHHhccCcchhcchhhhh-ccccccccccccccccccCcccc
Confidence 66543 22444555666666666655321110 00112333445555566665544
No 469
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.91 E-value=1.8e-10 Score=116.68 Aligned_cols=132 Identities=27% Similarity=0.269 Sum_probs=88.3
Q ss_pred cccCceeecCCcccccCCCcccccccccccccCCCCCcCCCCccccccccccceEeCccccCCCCccccccCCCCccEEe
Q 001838 483 LTSLRALYLGSNRFTSALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRNNLSGDIPITIGGLKNLQKLF 562 (1007)
Q Consensus 483 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~Ldls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 562 (1007)
...|+.+|||+|.|+ .+.....-++.++.|++|+|.+...- .+..+.+|+.||||+|.++ .+..+-..|.+++.|.
T Consensus 283 Wq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v~--nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~ 358 (490)
T KOG1259|consen 283 WQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTVQ--NLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLK 358 (490)
T ss_pred Hhhhhhccccccchh-hhhhhhhhccceeEEeccccceeeeh--hhhhcccceEeecccchhH-hhhhhHhhhcCEeeee
Confidence 344555666666554 24444444556666666666654322 2455677777888888776 4555556677888888
Q ss_pred ccccccccccCccCcCCCCCCEEECCCCcccccC-CcchhhhcCCCeeeCcCCcccccc
Q 001838 563 LANNRLEGPIPESFSGLSSLEILDLSKNKISGVI-PTSLEKLLYLKKLNLSFNKLEGEI 620 (1007)
Q Consensus 563 Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~-p~~l~~l~~L~~L~ls~N~l~~~i 620 (1007)
|+.|.|... ..+..+-+|..||+++|+|.... -..+++||-|+.+.|.+|++.+.+
T Consensus 359 La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~v 415 (490)
T KOG1259|consen 359 LAQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSV 415 (490)
T ss_pred hhhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccc
Confidence 888888633 34566778888999999887432 245778888899999999988643
No 470
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.91 E-value=1e-09 Score=123.52 Aligned_cols=237 Identities=22% Similarity=0.208 Sum_probs=165.1
Q ss_pred cccccceecc--cCceEEEEEEE--c-CCceEEEEEechhh--HHHHHHHHHHHHHHHhcC-CCceeEEEEEEecCCeeE
Q 001838 727 RFSKNNLLGI--GSFGSVYVARL--Q-DGMEVAVKVFHQRY--ERALKSFQDECEVMKRIR-HRNLVKIISACSNDDFKA 798 (1007)
Q Consensus 727 ~~~~~~~ig~--G~~g~Vy~~~~--~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~ 798 (1007)
.|.....+|+ |.+|.||.+.. . ++..+|+|+-+... ......=.+|....++++ |+|.|+.+..+..++..+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf 194 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF 194 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence 3555678999 99999999986 3 58889999844322 122233356777777885 999999999999999999
Q ss_pred EEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHH----HHHHHHhcCCCCceeccc-------------cccceeecc
Q 001838 799 LIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVAL----ALEYLHFGHSTPIIHYMV-------------AHISDFSIA 861 (1007)
Q Consensus 799 lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~----~l~yLH~~~~~~ivH~~~-------------~kl~DFGla 861 (1007)
+-.|+|. .++.++.+.....++......+..+..+ |+.++ |+..++|.++ .+++|||+.
T Consensus 195 iqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~---hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v 270 (524)
T KOG0601|consen 195 IQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHL---HSNNIVHDDLKPANIFTTSDWTSCKLTDFGLV 270 (524)
T ss_pred eeecccc-chhHHhhhcccccCCchhhhhHHhhhhhccccccccc---CCCcccccccchhheecccccceeecCCccee
Confidence 9999996 6888888766556777778888888888 99988 7888999644 378999999
Q ss_pred eecCCCCcccc---cccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccH
Q 001838 862 KFLNGQDQLSM---QTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISV 938 (1007)
Q Consensus 862 ~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~ 938 (1007)
..+....-... .....|...|++||.. .+-++.+.|+||+|.+..|..+|..+....... .|.....-.-.
T Consensus 271 ~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~-~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~-----~W~~~r~~~ip 344 (524)
T KOG0601|consen 271 SKISDGNFSSVFKVSKRPEGDCIYAAKELL-NGLATFASDIFSLGEVILEAILGSHLPSVGKNS-----SWSQLRQGYIP 344 (524)
T ss_pred EEccCCccccceeeeecCCCCceEeChhhh-ccccchHhhhcchhhhhHhhHhhcccccCCCCC-----CccccccccCc
Confidence 98865432211 1223567789999974 456789999999999999999987654321111 12111000000
Q ss_pred HHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001838 939 MEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTG 988 (1007)
Q Consensus 939 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~ 988 (1007)
.+..+. ...++......+++++|..|++++++...
T Consensus 345 ~e~~~~---------------~s~~l~~~~~~~~d~~~~~~~~~q~~~~l 379 (524)
T KOG0601|consen 345 LEFCEG---------------GSSSLRSVTSQMLDEDPRLRLTAQILTAL 379 (524)
T ss_pred hhhhcC---------------cchhhhhHHHHhcCcchhhhhHHHHHhcc
Confidence 011100 01223347778999999999998876653
No 471
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=98.87 E-value=1.1e-08 Score=107.89 Aligned_cols=124 Identities=12% Similarity=0.162 Sum_probs=92.0
Q ss_pred cceec-ccCceEEEEEEEcCCceEEEEEechhh-------------HHHHHHHHHHHHHHHhcCCCce--eEEEEEEecC
Q 001838 731 NNLLG-IGSFGSVYVARLQDGMEVAVKVFHQRY-------------ERALKSFQDECEVMKRIRHRNL--VKIISACSND 794 (1007)
Q Consensus 731 ~~~ig-~G~~g~Vy~~~~~~g~~vavK~~~~~~-------------~~~~~~~~~E~~~l~~l~H~ni--v~l~~~~~~~ 794 (1007)
...|| .||.|+||++... +..+|||++.... ......+.+|++++.+++|++| ++.+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 46788 8999999999875 7789999885311 1223567889999999998875 6777765432
Q ss_pred C----eeEEEEEecCC-CChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccce
Q 001838 795 D----FKALIMEYMPN-GSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISD 857 (1007)
Q Consensus 795 ~----~~~lv~E~~~~-gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~D 857 (1007)
. ..++||||++| .+|.+++... .++.. .+.+++.++.+| |..+|+|+|++ +++|
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~--~l~~~----~~~~i~~~l~~l---H~~GI~HrDlkp~NILv~~~~~v~LID 185 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEA--PLSEE----QWQAIGQLIARF---HDAGVYHADLNAHNILLDPDGKFWLID 185 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcC--CCCHH----HHHHHHHHHHHH---HHCCCCCCCCCchhEEEcCCCCEEEEE
Confidence 2 23599999997 6999888653 24432 356899999999 67899999764 6889
Q ss_pred eecceec
Q 001838 858 FSIAKFL 864 (1007)
Q Consensus 858 FGla~~~ 864 (1007)
||.++..
T Consensus 186 fg~~~~~ 192 (239)
T PRK01723 186 FDRGELR 192 (239)
T ss_pred CCCcccC
Confidence 9987753
No 472
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=98.86 E-value=1.7e-09 Score=79.83 Aligned_cols=40 Identities=40% Similarity=0.959 Sum_probs=30.6
Q ss_pred cchHHHHHHHHHhcccCCCCccccCCCCC--CCCccccceEeC
Q 001838 24 TTDQQSLLALKAHISYDPTNLFAKNWTSS--TSVCSWIGITCG 64 (1007)
Q Consensus 24 ~~~~~~ll~~k~~~~~~~~~~~~~~w~~~--~~~C~w~gv~c~ 64 (1007)
+.|++||++||+++..+|.+.+. +|..+ .+||+|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~-~W~~~~~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLS-SWNPSSDSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCT-T--TT--S-CCCSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccc-cCCCcCCCCCeeeccEEeC
Confidence 47999999999999877877777 99987 799999999996
No 473
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.81 E-value=2.2e-09 Score=86.69 Aligned_cols=60 Identities=45% Similarity=0.649 Sum_probs=37.1
Q ss_pred CccEEeccccccccccCccCcCCCCCCEEECCCCcccccCCcchhhhcCCCeeeCcCCcc
Q 001838 557 NLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNKISGVIPTSLEKLLYLKKLNLSFNKL 616 (1007)
Q Consensus 557 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~ls~N~l 616 (1007)
+|++|++++|+|+...++.|.++++|++||+++|+|+...|..|..+++|+.|++++|+|
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 456666666666655555666666666666666666666666666666666666666654
No 474
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=98.80 E-value=1.1e-08 Score=117.51 Aligned_cols=129 Identities=23% Similarity=0.226 Sum_probs=86.2
Q ss_pred cceecccCceEEEEEEEcCCceEEEEEechhhHHH----------------------------------------HHHHH
Q 001838 731 NNLLGIGSFGSVYVARLQDGMEVAVKVFHQRYERA----------------------------------------LKSFQ 770 (1007)
Q Consensus 731 ~~~ig~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~----------------------------------------~~~~~ 770 (1007)
.+.||+|++|.||+|++++|+.||||+.++...+. .-+|.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 36899999999999999999999999986431100 00255
Q ss_pred HHHHHHHhcC----CCceeEEEEEEe-cCCeeEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHH-HHHHHhcCC
Q 001838 771 DECEVMKRIR----HRNLVKIISACS-NDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALA-LEYLHFGHS 844 (1007)
Q Consensus 771 ~E~~~l~~l~----H~niv~l~~~~~-~~~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~-l~yLH~~~~ 844 (1007)
+|++.+.+++ |.+-|.+-.++. .....+|||||++|++|.++........ .+.+++..++++ +..+ |.
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~---~~~~ia~~~~~~~l~ql---~~ 275 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGL---DRKALAENLARSFLNQV---LR 275 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCC---CHHHHHHHHHHHHHHHH---Hh
Confidence 5666666653 333333333332 2345799999999999988765322122 234566666653 4555 67
Q ss_pred CCceeccc------------cccceeecceecC
Q 001838 845 TPIIHYMV------------AHISDFSIAKFLN 865 (1007)
Q Consensus 845 ~~ivH~~~------------~kl~DFGla~~~~ 865 (1007)
.+++|+|. .++.|||++..+.
T Consensus 276 ~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 276 DGFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred CCceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 78999865 3799999998775
No 475
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.80 E-value=4.5e-10 Score=116.98 Aligned_cols=217 Identities=27% Similarity=0.359 Sum_probs=115.4
Q ss_pred ccccCCCCCCEEEcCCCCCCCC----CCccccCcccCcEEeccCcccCCcchhhhhhcCCCCeecccCcccCCCCchhH-
Q 001838 86 PQLGNLSSLETLDLSHNKLSGN----IPSSIFNMHTLKLLDFRDNQLFGSLSSFIFNMSSMLGIDLSINRFSGELPANI- 160 (1007)
Q Consensus 86 ~~l~~l~~L~~LdLs~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~ip~~~- 160 (1007)
+.+.....++.++||+|.|... +...+.+.++|+.-++|+= ++|.+- ..+|+.+
T Consensus 24 ~~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~-ftGR~~--------------------~Ei~e~L~ 82 (382)
T KOG1909|consen 24 EELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDM-FTGRLK--------------------DEIPEALK 82 (382)
T ss_pred HHhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhh-hcCCcH--------------------HHHHHHHH
Confidence 3455566777888888877532 3445556666776666542 222111 1122211
Q ss_pred -----hhcCCCCcEEEccCccccccCCcc----ccCCCCCcEEEcccccCCCCC-------------CcccccccccceE
Q 001838 161 -----CKNLPNLKKLLLGRNMFHGKIPST----LSKCKQLEGLYLRFNNLSGAI-------------PKEIGNLTKLKDI 218 (1007)
Q Consensus 161 -----~~~l~~L~~L~Ls~N~l~~~~p~~----~~~l~~L~~L~Ls~N~l~~~~-------------p~~~~~l~~L~~L 218 (1007)
....+.|++||||.|-|.-.-+.. +.++..|++|+|.+|.+.-.- -.-.++-++|+++
T Consensus 83 ~l~~aL~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~ 162 (382)
T KOG1909|consen 83 MLSKALLGCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVF 162 (382)
T ss_pred HHHHHHhcCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEE
Confidence 113445555555555554222222 334556666666666554110 1112334578888
Q ss_pred EcccCcCCCC----CCcccCCccccceeeccCccccc----cccccccCCCCCCeEEcccccccCcCCc---hhhcCCCC
Q 001838 219 ILNDNELRGE----IPQEMGNLPYLVRLTLATNNLVG----VVPFTIFNMSTLKKLSLLENTLWGSLPS---RIDLSLPN 287 (1007)
Q Consensus 219 ~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~lp~---~~~~~l~~ 287 (1007)
+..+|++... +...|...+.|+.+.++.|.|.. .....|..+++|+.|||.+|.++..-.. .....++.
T Consensus 163 i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~ 242 (382)
T KOG1909|consen 163 ICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPH 242 (382)
T ss_pred EeeccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccch
Confidence 8888887642 22345666778888888887642 1234456777777777777776422111 11224556
Q ss_pred CcEEeccCCCCCCCCCcccc-----ccCCCCEEEecCCCcC
Q 001838 288 VEFLNLGTNRFSGNIPSSIT-----NASKLTVFQLRGNSFS 323 (1007)
Q Consensus 288 L~~L~Ls~N~l~~~~p~~~~-----~l~~L~~L~Ls~N~l~ 323 (1007)
|+.|+++++.+...-..+|. ..++|++|.+.+|.++
T Consensus 243 L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt 283 (382)
T KOG1909|consen 243 LRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEIT 283 (382)
T ss_pred heeecccccccccccHHHHHHHHhccCCCCceeccCcchhH
Confidence 66777766666543222221 2345566666666554
No 476
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=98.79 E-value=3.2e-08 Score=112.40 Aligned_cols=155 Identities=17% Similarity=0.222 Sum_probs=111.5
Q ss_pred EcCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEecCCCChhHhhhcCCCCCCHHHHH
Q 001838 747 LQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEYMPNGSLENRLYSGTCMLDIFQRL 826 (1007)
Q Consensus 747 ~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~ 826 (1007)
..++.+|.|...+.......+...+-++.++.+|||||++++..++.++..|+|+|-+. .|..++.+.. .....
T Consensus 34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l~----~~~v~ 107 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKELG----KEEVC 107 (690)
T ss_pred eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHhH----HHHHH
Confidence 45788999998876655444556778899999999999999999999999999999985 5777776532 34445
Q ss_pred HHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCCCCcccccccccCCcccccccccccCCCC
Q 001838 827 NIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNGQDQLSMQTQTLATIGYMAPEYGVQGRVS 894 (1007)
Q Consensus 827 ~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 894 (1007)
-.+.||+.||.||| +...++|..+. ||++|-++.....-.. ......---.|..|+.+....
T Consensus 108 ~Gl~qIl~AL~FL~--~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~--~~~~~~~~~s~~~P~~~~~s~-- 181 (690)
T KOG1243|consen 108 LGLFQILAALSFLN--DDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA--PAKSLYLIESFDDPEEIDPSE-- 181 (690)
T ss_pred HHHHHHHHHHHHHh--ccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc--ccccchhhhcccChhhcCccc--
Confidence 57899999999998 67889998664 6777776654322111 001111122366676543322
Q ss_pred chhhHHHHHHHHHHHHhCC
Q 001838 895 TRGDVYSYGIMLMETFTGK 913 (1007)
Q Consensus 895 ~~~DvwS~Gvil~elltG~ 913 (1007)
-..|.|-|||+++|++.|.
T Consensus 182 ~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 182 WSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred cchhhhhHHHHHHHHhCcc
Confidence 3469999999999999993
No 477
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.74 E-value=6e-09 Score=84.18 Aligned_cols=59 Identities=34% Similarity=0.436 Sum_probs=27.1
Q ss_pred CCcEEEccCccccccCCccccCCCCCcEEEcccccCCCCCCcccccccccceEEcccCc
Q 001838 166 NLKKLLLGRNMFHGKIPSTLSKCKQLEGLYLRFNNLSGAIPKEIGNLTKLKDIILNDNE 224 (1007)
Q Consensus 166 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 224 (1007)
+|++|++++|+|+...++.|.++++|++|++++|+++...|.+|.++++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 34444444444444433444444444444444444444444444444444444444443
No 478
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.74 E-value=1.4e-09 Score=113.28 Aligned_cols=230 Identities=21% Similarity=0.297 Sum_probs=161.4
Q ss_pred CcEEEEEeCCCCCcc----cCcccccCCCCCCEEEcCCCCCCC----CCCc-------cccCcccCcEEeccCcccCCcc
Q 001838 68 HKVIVLNISGFNLQG----TIPPQLGNLSSLETLDLSHNKLSG----NIPS-------SIFNMHTLKLLDFRDNQLFGSL 132 (1007)
Q Consensus 68 ~~v~~L~L~~~~l~~----~~~~~l~~l~~L~~LdLs~N~l~~----~~p~-------~~~~l~~L~~L~Ls~N~l~~~~ 132 (1007)
..++.|+||||.|.- .+.+.+.+.++|+.-++|. -++| .+|+ ++-..++|++||||+|.|.-..
T Consensus 30 ~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd-~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~g 108 (382)
T KOG1909|consen 30 DSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSD-MFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPKG 108 (382)
T ss_pred CceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHh-hhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCccc
Confidence 368999999998853 3556677788888888874 3343 3443 3445568999999999886544
Q ss_pred hh----hhhhcCCCCeecccCcccCCCCchhH-------------hhcCCCCcEEEccCcccccc----CCccccCCCCC
Q 001838 133 SS----FIFNMSSMLGIDLSINRFSGELPANI-------------CKNLPNLKKLLLGRNMFHGK----IPSTLSKCKQL 191 (1007)
Q Consensus 133 ~~----~~~~l~~L~~LdLs~N~l~~~ip~~~-------------~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L 191 (1007)
+. .+....+|++|.|.+|.+. ..-... ...-+.|+++..++|++..- +...|...+.|
T Consensus 109 ~~~l~~ll~s~~~L~eL~L~N~Glg-~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~l 187 (382)
T KOG1909|consen 109 IRGLEELLSSCTDLEELYLNNCGLG-PEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGATALAEAFQSHPTL 187 (382)
T ss_pred hHHHHHHHHhccCHHHHhhhcCCCC-hhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccHHHHHHHHHhcccc
Confidence 43 3455678889999999885 222111 12457799999999998632 22346677899
Q ss_pred cEEEcccccCCC----CCCcccccccccceEEcccCcCCCC----CCcccCCccccceeeccCcccccccccccc-----
Q 001838 192 EGLYLRFNNLSG----AIPKEIGNLTKLKDIILNDNELRGE----IPQEMGNLPYLVRLTLATNNLVGVVPFTIF----- 258 (1007)
Q Consensus 192 ~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~----- 258 (1007)
+.+.++.|.+.. .+...|..+++|++|+|.+|-++.. +...+..+++|+.|+++++.+...-...|.
T Consensus 188 eevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~ 267 (382)
T KOG1909|consen 188 EEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFVDALKE 267 (382)
T ss_pred ceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHHHHHHHhc
Confidence 999999998842 1234577889999999999988743 345677788999999999988754433332
Q ss_pred CCCCCCeEEcccccccCcCCch---hhcCCCCCcEEeccCCCCC
Q 001838 259 NMSTLKKLSLLENTLWGSLPSR---IDLSLPNVEFLNLGTNRFS 299 (1007)
Q Consensus 259 ~l~~L~~L~L~~N~l~~~lp~~---~~~~l~~L~~L~Ls~N~l~ 299 (1007)
..++|+.|.+.+|.+...--.. .....|.|+.|+|++|++.
T Consensus 268 ~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 268 SAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred cCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 3678999999999875321111 1124788999999999994
No 479
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.63 E-value=7.9e-08 Score=118.07 Aligned_cols=128 Identities=25% Similarity=0.217 Sum_probs=77.7
Q ss_pred cEEEEEeCCCCCcccCcccccCCCCCCEEEcCCCC--CCCCCCccccCcccCcEEeccCcccCCcchhhhhhcCCCCeec
Q 001838 69 KVIVLNISGFNLQGTIPPQLGNLSSLETLDLSHNK--LSGNIPSSIFNMHTLKLLDFRDNQLFGSLSSFIFNMSSMLGID 146 (1007)
Q Consensus 69 ~v~~L~L~~~~l~~~~~~~l~~l~~L~~LdLs~N~--l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~Ld 146 (1007)
.+....+-+|++. .++.+.. .+.|++|-+..|. +....++.|..++.|++|||++|.=-+.+|..+++|-+|++||
T Consensus 524 ~~rr~s~~~~~~~-~~~~~~~-~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~ 601 (889)
T KOG4658|consen 524 SVRRMSLMNNKIE-HIAGSSE-NPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLD 601 (889)
T ss_pred heeEEEEeccchh-hccCCCC-CCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhccc
Confidence 3444445555544 2222222 2256677676665 4433334456677777777776665566677777777777777
Q ss_pred ccCcccCCCCchhHhhcCCCCcEEEccCccccccCCccccCCCCCcEEEccccc
Q 001838 147 LSINRFSGELPANICKNLPNLKKLLLGRNMFHGKIPSTLSKCKQLEGLYLRFNN 200 (1007)
Q Consensus 147 Ls~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 200 (1007)
|++..++ .+|.++. +|..|.+|++..+.-...+|.....+.+|++|.+..-.
T Consensus 602 L~~t~I~-~LP~~l~-~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 602 LSDTGIS-HLPSGLG-NLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSA 653 (889)
T ss_pred ccCCCcc-ccchHHH-HHHhhheeccccccccccccchhhhcccccEEEeeccc
Confidence 7777776 6777664 57777777777666555556666667777777766543
No 480
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.58 E-value=8.5e-09 Score=121.74 Aligned_cols=238 Identities=21% Similarity=0.269 Sum_probs=153.6
Q ss_pred hcccccccceecccCceEEEEEEEc-CCceEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEE
Q 001838 724 ATDRFSKNNLLGIGSFGSVYVARLQ-DGMEVAVKVFHQRY---ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKAL 799 (1007)
Q Consensus 724 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 799 (1007)
..+.+.+.+-+-+|+++.++-+.-. .|...++|...... ....+....+-.+.-..+||-+++...-+......+|
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L 881 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL 881 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence 3455666777888999999987643 35445555443221 1112333444444444567878877666666778899
Q ss_pred EEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc------------ccceeecceecCC-
Q 001838 800 IMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA------------HISDFSIAKFLNG- 866 (1007)
Q Consensus 800 v~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~------------kl~DFGla~~~~~- 866 (1007)
|++|..+|+|...++...+ .+..........+.++.+|| |+..++|++.+ +++|||..+....
T Consensus 882 ~~~~~~~~~~~Skl~~~~~-~saepaRs~i~~~vqs~e~L---~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~ 957 (1205)
T KOG0606|consen 882 VGHYLNGGDLPSKLHNSGC-LSAEPARSPILERVQSLESL---HSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLI 957 (1205)
T ss_pred hhHHhccCCchhhhhcCCC-cccccccchhHHHHhhhhcc---ccchhhcccccccchhhcccCCcccCccccccccccc
Confidence 9999999999999987553 33333344566788999999 56668888654 6888884332110
Q ss_pred -----C-----------------------CcccccccccCCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCc
Q 001838 867 -----Q-----------------------DQLSMQTQTLATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDE 918 (1007)
Q Consensus 867 -----~-----------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~ 918 (1007)
. +.........||+.|.|||...+......+|+|+.|++++|.++|.+||..
T Consensus 958 ~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na 1037 (1205)
T KOG0606|consen 958 PPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNA 1037 (1205)
T ss_pred cCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCC
Confidence 0 000112345789999999999999999999999999999999999999986
Q ss_pred cccCcchHHHHHHhhcCccHHHHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 001838 919 IFIGELSLSRWVNDLLPISVMEVIDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAR 983 (1007)
Q Consensus 919 ~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~ 983 (1007)
...... ++..+. ........+.+...++.+++...+..+|.+|-.|.
T Consensus 1038 ~tpq~~-----------------f~ni~~-~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1038 ETPQQI-----------------FENILN-RDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred cchhhh-----------------hhcccc-CCCCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 433221 111000 00000011222334567777778888888887665
No 481
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=98.58 E-value=2e-06 Score=100.11 Aligned_cols=133 Identities=20% Similarity=0.179 Sum_probs=80.1
Q ss_pred cccccceecccCceEEEEEEEcC-CceEEEEEechhhH----------------------------------HHHH----
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQD-GMEVAVKVFHQRYE----------------------------------RALK---- 767 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~~-g~~vavK~~~~~~~----------------------------------~~~~---- 767 (1007)
.|+. +.||+|++|.||+|++++ |+.||||+.++... +..+
T Consensus 121 ~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ 199 (537)
T PRK04750 121 DFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHD 199 (537)
T ss_pred hcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHH
Confidence 4665 789999999999999987 99999999974321 0011
Q ss_pred --HHHHHHHHHHhcC----CCceeEEEEEEec-CCeeEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHH
Q 001838 768 --SFQDECEVMKRIR----HRNLVKIISACSN-DDFKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLH 840 (1007)
Q Consensus 768 --~~~~E~~~l~~l~----H~niv~l~~~~~~-~~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH 840 (1007)
+|.+|+..+.+++ +...|.+-.++.+ ....+|||||++|+.+.+.-.-.....+. ..++...++. |++
T Consensus 200 ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~---~~la~~~v~~--~~~ 274 (537)
T PRK04750 200 ELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDM---KLLAERGVEV--FFT 274 (537)
T ss_pred hhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCH---HHHHHHHHHH--HHH
Confidence 2344555555542 4444444444433 34578999999999998743211111221 1222222221 222
Q ss_pred hcCCCCceeccc----------------cccceeecceecC
Q 001838 841 FGHSTPIIHYMV----------------AHISDFSIAKFLN 865 (1007)
Q Consensus 841 ~~~~~~ivH~~~----------------~kl~DFGla~~~~ 865 (1007)
.....+++|+|. .++.|||++..+.
T Consensus 275 Qif~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 275 QVFRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred HHHhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 224567888753 3678999988764
No 482
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.56 E-value=3.5e-08 Score=121.14 Aligned_cols=127 Identities=24% Similarity=0.262 Sum_probs=61.8
Q ss_pred ccCcEEeccCcccCCcchhhhhhcCCCCeecccCccc-CCCCchhHhhcCCCCcEEEccCccccccCCccccCCCCCcEE
Q 001838 116 HTLKLLDFRDNQLFGSLSSFIFNMSSMLGIDLSINRF-SGELPANICKNLPNLKKLLLGRNMFHGKIPSTLSKCKQLEGL 194 (1007)
Q Consensus 116 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l-~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 194 (1007)
...+...+-+|.+...... . .-+.|++|-+..|.. ...++...|..++.|++|||++|.=-+.+|+.++.|-+|++|
T Consensus 523 ~~~rr~s~~~~~~~~~~~~-~-~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL 600 (889)
T KOG4658|consen 523 NSVRRMSLMNNKIEHIAGS-S-ENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYL 600 (889)
T ss_pred hheeEEEEeccchhhccCC-C-CCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcc
Confidence 4556666666655322111 1 111344555555541 124555555555555555555544334555555555555555
Q ss_pred EcccccCCCCCCcccccccccceEEcccCcCCCCCCcccCCccccceeecc
Q 001838 195 YLRFNNLSGAIPKEIGNLTKLKDIILNDNELRGEIPQEMGNLPYLVRLTLA 245 (1007)
Q Consensus 195 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 245 (1007)
+|++..++ .+|..+++|.+|.+|++..+.-...+|.....+++|++|.+-
T Consensus 601 ~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~ 650 (889)
T KOG4658|consen 601 DLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLP 650 (889)
T ss_pred cccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEee
Confidence 55555554 455555555555555555544333334444445555555443
No 483
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.55 E-value=2.8e-08 Score=112.07 Aligned_cols=241 Identities=18% Similarity=0.090 Sum_probs=163.0
Q ss_pred HHHhcccccccceecccCceEEEEEEEc--CCceEEEEEechhhHHH--HHHHHHHHHHHHhc-CCCceeEEEEEEecCC
Q 001838 721 LLQATDRFSKNNLLGIGSFGSVYVARLQ--DGMEVAVKVFHQRYERA--LKSFQDECEVMKRI-RHRNLVKIISACSNDD 795 (1007)
Q Consensus 721 ~~~~~~~~~~~~~ig~G~~g~Vy~~~~~--~g~~vavK~~~~~~~~~--~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~ 795 (1007)
....+.+|..+..||.|.|+.|++...+ ++..+|+|.+....... ...-..|+-+...+ .|.++++++..+...+
T Consensus 260 ~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r 339 (524)
T KOG0601|consen 260 TSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLR 339 (524)
T ss_pred ceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccc
Confidence 3445667888999999999999998754 57789999876543221 12234577776666 4999999988888877
Q ss_pred eeEEEEEecCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc-------------ccceeecce
Q 001838 796 FKALIMEYMPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA-------------HISDFSIAK 862 (1007)
Q Consensus 796 ~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~-------------kl~DFGla~ 862 (1007)
..|+--|||++++......- ...++...++++..|++.++.++ |++.++|+|++ ++.|||.+.
T Consensus 340 ~~~ip~e~~~~~s~~l~~~~-~~~~d~~~~~~~~~q~~~~l~~i---~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t 415 (524)
T KOG0601|consen 340 QGYIPLEFCEGGSSSLRSVT-SQMLDEDPRLRLTAQILTALNVI---HSKLFVHLDVKPSNILISNDGFFSKLGDFGCWT 415 (524)
T ss_pred cccCchhhhcCcchhhhhHH-HHhcCcchhhhhHHHHHhccccc---cchhhhcccccccceeeccchhhhhcccccccc
Confidence 88899999999998766632 22467778889999999999999 68889998553 678888876
Q ss_pred ecCCCCcccccccccCCccc-ccccccccCCCCchhhHHHHHHHHHHHHhCCCCCCccccCcchHHHHHHhhcCccHHHH
Q 001838 863 FLNGQDQLSMQTQTLATIGY-MAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTDEIFIGELSLSRWVNDLLPISVMEV 941 (1007)
Q Consensus 863 ~~~~~~~~~~~~~~~gt~~y-~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 941 (1007)
.+.-... ....++..| .+|+......+..+.|++|||.-+.|.++|..--+. ...|.....
T Consensus 416 ~~~~~~~----~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~-------~~~~~~i~~------- 477 (524)
T KOG0601|consen 416 RLAFSSG----VFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSES-------GVQSLTIRS------- 477 (524)
T ss_pred ccceecc----cccccccccccchhhccccccccccccccccccccccccCcccCcc-------cccceeeec-------
Confidence 4321100 111123334 355555667789999999999999999998753221 011111000
Q ss_pred hhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHH
Q 001838 942 IDTNLLSGEERYFAAKEQSLLSILNLATECTIESPGKRINAREIVTGLLKIR 993 (1007)
Q Consensus 942 ~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~evl~~L~~i~ 993 (1007)
.... .......++..++..+..+++..||.+.+...+.+-.+
T Consensus 478 --~~~p--------~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~~ 519 (524)
T KOG0601|consen 478 --GDTP--------NLPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFYR 519 (524)
T ss_pred --cccc--------CCCchHHhhhhhhhhhcCCccccchhhhhhcccchhhh
Confidence 0000 00011234667777888999999999988877665443
No 484
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.48 E-value=4.1e-09 Score=118.79 Aligned_cols=180 Identities=29% Similarity=0.311 Sum_probs=109.5
Q ss_pred chhhhhccccCccccCCCccCCCCchhhhc-ccccceeeccccccc---CCCCCCCC------CcccCceeecCCccccc
Q 001838 429 PVTFSRLLNLQGLGLAFNKLARSIPDEICH-LAKLDKLILHGNKFS---GAIPSCSG------NLTSLRALYLGSNRFTS 498 (1007)
Q Consensus 429 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~---~~~p~~~~------~l~~L~~L~Ls~N~l~~ 498 (1007)
|-.+..+.+|+.|.|.+..|+.. ..+.. -..|++|.-+ |.+. ..+..+.+ ....|...+.+.|++.
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~~--~GL~~lr~qLe~LIC~-~Sl~Al~~v~ascggd~~ns~~Wn~L~~a~fsyN~L~- 177 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLSTA--KGLQELRHQLEKLICH-NSLDALRHVFASCGGDISNSPVWNKLATASFSYNRLV- 177 (1096)
T ss_pred CceeccccceeeEEecCcchhhh--hhhHHHHHhhhhhhhh-ccHHHHHHHHHHhccccccchhhhhHhhhhcchhhHH-
Confidence 55677788888888888887531 11111 1234444322 2221 01111111 1235667777778776
Q ss_pred CCCcccccccccccccCCCCCcCCCCccccccccccceEeCccccCCCCcc-ccccCCCCccEEeccccccccccCccCc
Q 001838 499 ALPSTIWNLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRNNLSGDIP-ITIGGLKNLQKLFLANNRLEGPIPESFS 577 (1007)
Q Consensus 499 ~~p~~~~~l~~L~~Ldls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 577 (1007)
.....+.-++.++.||||+|+++..- .+..++.|.+|||+.|.+. .+| ....++. |+.|+|++|.++.. ..+.
T Consensus 178 ~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~lrnN~l~tL--~gie 251 (1096)
T KOG1859|consen 178 LMDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLNLRNNALTTL--RGIE 251 (1096)
T ss_pred hHHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhc-cccccchhhhh-heeeeecccHHHhh--hhHH
Confidence 34455666777788888888887533 4566777778888888887 343 2333343 88888888877643 2456
Q ss_pred CCCCCCEEECCCCcccccCC-cchhhhcCCCeeeCcCCcccc
Q 001838 578 GLSSLEILDLSKNKISGVIP-TSLEKLLYLKKLNLSFNKLEG 618 (1007)
Q Consensus 578 ~l~~L~~LdLs~N~l~~~~p-~~l~~l~~L~~L~ls~N~l~~ 618 (1007)
+|.+|+-||||+|-|++.-- ..+..|..|+.|+|.+|++.+
T Consensus 252 ~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c 293 (1096)
T KOG1859|consen 252 NLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCC 293 (1096)
T ss_pred hhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcccc
Confidence 77778888888887776421 223456677778888888764
No 485
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.40 E-value=1.3e-08 Score=114.79 Aligned_cols=180 Identities=27% Similarity=0.298 Sum_probs=118.5
Q ss_pred cccccCCCCCCEEEcCCCCCCCCCCccccCc-ccCcEEeccCcccCC---cchhhhhhc------CCCCeecccCcccCC
Q 001838 85 PPQLGNLSSLETLDLSHNKLSGNIPSSIFNM-HTLKLLDFRDNQLFG---SLSSFIFNM------SSMLGIDLSINRFSG 154 (1007)
Q Consensus 85 ~~~l~~l~~L~~LdLs~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~---~~~~~~~~l------~~L~~LdLs~N~l~~ 154 (1007)
|-++..+.+|+.|.|.+..|.. -..+..+ ..|+.|. -+|.+.. .+.+-.+.. ..|...+.|+|++.
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~--~~GL~~lr~qLe~LI-C~~Sl~Al~~v~ascggd~~ns~~Wn~L~~a~fsyN~L~- 177 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLST--AKGLQELRHQLEKLI-CHNSLDALRHVFASCGGDISNSPVWNKLATASFSYNRLV- 177 (1096)
T ss_pred CceeccccceeeEEecCcchhh--hhhhHHHHHhhhhhh-hhccHHHHHHHHHHhccccccchhhhhHhhhhcchhhHH-
Confidence 4467777888888888877763 1111111 2233333 2222211 000000111 24677889999987
Q ss_pred CCchhHhhcCCCCcEEEccCccccccCCccccCCCCCcEEEcccccCCCCCCcccccccccceEEcccCcCCCCCCcccC
Q 001838 155 ELPANICKNLPNLKKLLLGRNMFHGKIPSTLSKCKQLEGLYLRFNNLSGAIPKEIGNLTKLKDIILNDNELRGEIPQEMG 234 (1007)
Q Consensus 155 ~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 234 (1007)
.+...+ .-++.|+.|||++|+++.. +.+..++.|++|||++|.|. .+|.-=..-.+|..|.+++|.++.. ..+.
T Consensus 178 ~mD~SL-qll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~L~~L~lrnN~l~tL--~gie 251 (1096)
T KOG1859|consen 178 LMDESL-QLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLR-HVPQLSMVGCKLQLLNLRNNALTTL--RGIE 251 (1096)
T ss_pred hHHHHH-HHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhc-cccccchhhhhheeeeecccHHHhh--hhHH
Confidence 444444 4688999999999999844 37888999999999999998 4444222223499999999998843 3478
Q ss_pred CccccceeeccCcccccccccc-ccCCCCCCeEEccccccc
Q 001838 235 NLPYLVRLTLATNNLVGVVPFT-IFNMSTLKKLSLLENTLW 274 (1007)
Q Consensus 235 ~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~ 274 (1007)
+|.+|+.|||++|-|.+.-... +..+..|+.|+|.+|.+.
T Consensus 252 ~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 252 NLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred hhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 8999999999999987654322 345678888999988874
No 486
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=98.34 E-value=9e-07 Score=88.56 Aligned_cols=119 Identities=18% Similarity=0.125 Sum_probs=82.0
Q ss_pred cceecccCceEEEEEEEcCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCcee-EEEEEEecCCeeEEEEEecCCCCh
Q 001838 731 NNLLGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLV-KIISACSNDDFKALIMEYMPNGSL 809 (1007)
Q Consensus 731 ~~~ig~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv-~l~~~~~~~~~~~lv~E~~~~gsL 809 (1007)
.+.++.|.++.||+++.. |..|++|+...... ....+..|+++++.+.+.+++ +++++.. ...++||||++|.++
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G~~l 78 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIEGSEL 78 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecCCCcc
Confidence 467899999999999875 77899999865432 123467899999998765554 4444433 345899999999887
Q ss_pred hHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcC--CCCceecccc-----------ccceeecce
Q 001838 810 ENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGH--STPIIHYMVA-----------HISDFSIAK 862 (1007)
Q Consensus 810 ~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~--~~~ivH~~~~-----------kl~DFGla~ 862 (1007)
.+.- . ....++.+++++++.||... ...++|+|+. +++|||.+.
T Consensus 79 ~~~~------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~~~~~~liDf~~a~ 135 (170)
T cd05151 79 LTED------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLDDGRLWLIDWEYAG 135 (170)
T ss_pred cccc------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEECCeEEEEeccccc
Confidence 6430 1 11235678999999997432 2346998753 567776655
No 487
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.33 E-value=5.6e-08 Score=87.87 Aligned_cols=78 Identities=32% Similarity=0.451 Sum_probs=39.7
Q ss_pred cccCcccCCCCchhHhhcCCCCcEEEccCccccccCCccccCCCCCcEEEcccccCCCCCCcccccccccceEEcccCcC
Q 001838 146 DLSINRFSGELPANICKNLPNLKKLLLGRNMFHGKIPSTLSKCKQLEGLYLRFNNLSGAIPKEIGNLTKLKDIILNDNEL 225 (1007)
Q Consensus 146 dLs~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 225 (1007)
+||+|.|. .+|+.+....+-++.|+|++|+|+ .+|..++.++.|+.|+++.|.+. ..|..+..|.+|..|+..+|.+
T Consensus 59 ~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Lds~~na~ 135 (177)
T KOG4579|consen 59 SLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLDSPENAR 135 (177)
T ss_pred ecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhcCCCCcc
Confidence 44444444 444444433444555555555554 34444555555555555555554 3444444455555555555555
Q ss_pred C
Q 001838 226 R 226 (1007)
Q Consensus 226 ~ 226 (1007)
.
T Consensus 136 ~ 136 (177)
T KOG4579|consen 136 A 136 (177)
T ss_pred c
Confidence 4
No 488
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.30 E-value=4.4e-08 Score=88.49 Aligned_cols=131 Identities=21% Similarity=0.269 Sum_probs=77.5
Q ss_pred CEEEcCCCCCCCCCCccccCc---ccCcEEeccCcccCCcchhhhhhcCCCCeecccCcccCCCCchhHhhcCCCCcEEE
Q 001838 95 ETLDLSHNKLSGNIPSSIFNM---HTLKLLDFRDNQLFGSLSSFIFNMSSMLGIDLSINRFSGELPANICKNLPNLKKLL 171 (1007)
Q Consensus 95 ~~LdLs~N~l~~~~p~~~~~l---~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~ip~~~~~~l~~L~~L~ 171 (1007)
..+||+++.+- -++.....+ ..|+..+|++|.+...++.+-...+.++.|+|++|.|+ .+|.++ ..++.|+.|+
T Consensus 30 h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neis-dvPeE~-Aam~aLr~lN 106 (177)
T KOG4579|consen 30 HFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEIS-DVPEEL-AAMPALRSLN 106 (177)
T ss_pred hhcccccchhh-HHHHHHHHHhCCceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhh-hchHHH-hhhHHhhhcc
Confidence 34455555443 233333332 33444566666666555555566667777777777777 677774 4678888888
Q ss_pred ccCccccccCCccccCCCCCcEEEcccccCCCCCCcccccccccceEEcccCcCCCCCC
Q 001838 172 LGRNMFHGKIPSTLSKCKQLEGLYLRFNNLSGAIPKEIGNLTKLKDIILNDNELRGEIP 230 (1007)
Q Consensus 172 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 230 (1007)
++.|.|. ..|..+..|.+|..||..+|.+. .+|..+-.-++.-...+.++.+.+.-+
T Consensus 107 l~~N~l~-~~p~vi~~L~~l~~Lds~~na~~-eid~dl~~s~~~al~~lgnepl~~~~~ 163 (177)
T KOG4579|consen 107 LRFNPLN-AEPRVIAPLIKLDMLDSPENARA-EIDVDLFYSSLPALIKLGNEPLGDETK 163 (177)
T ss_pred cccCccc-cchHHHHHHHhHHHhcCCCCccc-cCcHHHhccccHHHHHhcCCcccccCc
Confidence 8888877 56667777888888888887776 444433222222233344455554433
No 489
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.28 E-value=3.6e-07 Score=93.27 Aligned_cols=178 Identities=25% Similarity=0.313 Sum_probs=83.9
Q ss_pred CCCCeecccCcccCC-CCchhHhhcCCCCcEEEccCccccccCCccccCCCCCcEEEcccccCCCC-CCcccccccccce
Q 001838 140 SSMLGIDLSINRFSG-ELPANICKNLPNLKKLLLGRNMFHGKIPSTLSKCKQLEGLYLRFNNLSGA-IPKEIGNLTKLKD 217 (1007)
Q Consensus 140 ~~L~~LdLs~N~l~~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~ 217 (1007)
+.++++||.+|.|+. +--..+.+++|.|++|+|+.|++...|-..=..+.+|+.|-|.+..+.-. ....+..++.++.
T Consensus 71 ~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vte 150 (418)
T KOG2982|consen 71 TDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVTE 150 (418)
T ss_pred hhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchhhhh
Confidence 344455555555541 00123445666666666666666533221113455666666666555422 2233445555555
Q ss_pred EEcccCcCCC----------CCCc--ccCCccccceeeccCccccccccccccCCCCCCeEEcccccccCcCCchhhcCC
Q 001838 218 IILNDNELRG----------EIPQ--EMGNLPYLVRLTLATNNLVGVVPFTIFNMSTLKKLSLLENTLWGSLPSRIDLSL 285 (1007)
Q Consensus 218 L~L~~N~l~~----------~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~lp~~~~~~l 285 (1007)
|.++.|.+.. .-|. .+..++.+..+.++-|++....| ++..+-+.+|.+...-...-+..+
T Consensus 151 lHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~Fp-------nv~sv~v~e~PlK~~s~ek~se~~ 223 (418)
T KOG2982|consen 151 LHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRIFP-------NVNSVFVCEGPLKTESSEKGSEPF 223 (418)
T ss_pred hhhccchhhhhccccccccccchhhhhhhcCCcHHHHHHHHHhHHhhcc-------cchheeeecCcccchhhcccCCCC
Confidence 5555553321 1111 12233444455555555554433 344455555544322222222345
Q ss_pred CCCcEEeccCCCCCCCC-CccccccCCCCEEEecCCCcCC
Q 001838 286 PNVEFLNLGTNRFSGNI-PSSITNASKLTVFQLRGNSFSG 324 (1007)
Q Consensus 286 ~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~ 324 (1007)
|.+-.|+|+.|+|..-. -+++..+++|..|.+++|.+..
T Consensus 224 p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d 263 (418)
T KOG2982|consen 224 PSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSD 263 (418)
T ss_pred CcchhhhhcccccccHHHHHHHcCCchhheeeccCCcccc
Confidence 55666677766665321 1234455666666666666543
No 490
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=98.21 E-value=2.1e-05 Score=79.17 Aligned_cols=125 Identities=17% Similarity=0.150 Sum_probs=86.5
Q ss_pred ceecccCceEEEEEEEcC-------CceEEEEEechhh-------------H-------------HHHHHHHHHHHHHHh
Q 001838 732 NLLGIGSFGSVYVARLQD-------GMEVAVKVFHQRY-------------E-------------RALKSFQDECEVMKR 778 (1007)
Q Consensus 732 ~~ig~G~~g~Vy~~~~~~-------g~~vavK~~~~~~-------------~-------------~~~~~~~~E~~~l~~ 778 (1007)
..||.|--+.||.|...+ +..+|||+.+... . .......+|.+.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 568999999999997553 4799999874210 0 011223489999999
Q ss_pred cC--CCceeEEEEEEecCCeeEEEEEecCCCChhH-hhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc--
Q 001838 779 IR--HRNLVKIISACSNDDFKALIMEYMPNGSLEN-RLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA-- 853 (1007)
Q Consensus 779 l~--H~niv~l~~~~~~~~~~~lv~E~~~~gsL~~-~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~-- 853 (1007)
+. .-++.+.+++ ..-++||||+.++.+.. .++.. .++..+...+..+++.+|.+++ |..+|||+|+.
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~--~~~~~~~~~i~~~i~~~l~~l~--H~~glVHGDLs~~ 154 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDA--KLNDEEMKNAYYQVLSMMKQLY--KECNLVHADLSEY 154 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhcc--ccCHHHHHHHHHHHHHHHHHHH--HhCCeecCCCCHH
Confidence 85 3455666654 34689999997754422 22221 2444456678899999999996 67799998763
Q ss_pred ---------ccceeecceec
Q 001838 854 ---------HISDFSIAKFL 864 (1007)
Q Consensus 854 ---------kl~DFGla~~~ 864 (1007)
.++|||.|-..
T Consensus 155 NIL~~~~~v~iIDF~qav~~ 174 (197)
T cd05146 155 NMLWHDGKVWFIDVSQSVEP 174 (197)
T ss_pred HEEEECCcEEEEECCCceeC
Confidence 69999988755
No 491
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.20 E-value=1.8e-07 Score=105.19 Aligned_cols=180 Identities=16% Similarity=0.138 Sum_probs=129.2
Q ss_pred cccccceecccCceEEEEEEEcCCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCc-eeEEEEEEecCCeeEEEEEecC
Q 001838 727 RFSKNNLLGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRN-LVKIISACSNDDFKALIMEYMP 805 (1007)
Q Consensus 727 ~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n-iv~l~~~~~~~~~~~lv~E~~~ 805 (1007)
.+..-+-.++|+++++||.+-...+....+.+... ....-++++|.+++||| .|+.++-+..++..+++++|+.
T Consensus 243 ws~~fh~fvK~altknpKkRptaeklL~h~fvs~~-----l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s 317 (829)
T KOG0576|consen 243 WSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT-----LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICS 317 (829)
T ss_pred chHHHHHHHHHHhcCCCccCCChhhheeceeeccc-----hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhc
Confidence 33334557899999999988554445556766544 33456899999999999 7777777777888999999999
Q ss_pred CC-ChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecc-------ccccceeecceecCCCCccccccccc
Q 001838 806 NG-SLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYM-------VAHISDFSIAKFLNGQDQLSMQTQTL 877 (1007)
Q Consensus 806 ~g-sL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~-------~~kl~DFGla~~~~~~~~~~~~~~~~ 877 (1007)
+| +-..-.......+...+...+...-.++++|+| +..-+|+| ..|..||+.+..+.... ..+...
T Consensus 318 ~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~---~~~~~~~d~~l~s~~~~~~~~~~v~~~L~~~~---~~~t~~ 391 (829)
T KOG0576|consen 318 TGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELH---SSYKVHRDNILGSEEEVKLLDFAVPPQLTRTM---KPRTAI 391 (829)
T ss_pred CCccccccCChhhHhhhhhhhhhhhhhhcccccccc---cccccCcccccccccccccccccCCcccCccc---ccccCC
Confidence 87 222212111112334444455666678888884 44456775 35889999888765432 234567
Q ss_pred CCcccccccccccCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 001838 878 ATIGYMAPEYGVQGRVSTRGDVYSYGIMLMETFTGKKPTD 917 (1007)
Q Consensus 878 gt~~y~aPE~~~~~~~~~~~DvwS~Gvil~elltG~~p~~ 917 (1007)
+|+.|+|||+.....+..+.|+|+.|+--.+|.-|-+|-.
T Consensus 392 ~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~ 431 (829)
T KOG0576|consen 392 GTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRS 431 (829)
T ss_pred CCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCC
Confidence 9999999999999999999999999998888888877754
No 492
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.10 E-value=4.6e-07 Score=92.46 Aligned_cols=179 Identities=23% Similarity=0.298 Sum_probs=88.0
Q ss_pred CCCCEEEcCCCCCCC--CCCccccCcccCcEEeccCcccCCcchhhhhhcCCCCeecccCcccCCCCchhHhhcCCCCcE
Q 001838 92 SSLETLDLSHNKLSG--NIPSSIFNMHTLKLLDFRDNQLFGSLSSFIFNMSSMLGIDLSINRFSGELPANICKNLPNLKK 169 (1007)
Q Consensus 92 ~~L~~LdLs~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~ip~~~~~~l~~L~~ 169 (1007)
+.++.|||.+|.|+. .+-.-+.+|+.|+.|+|++|.|...+...-..+.+|+.|-|.+..+.=.--......+|.++.
T Consensus 71 ~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vte 150 (418)
T KOG2982|consen 71 TDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVTE 150 (418)
T ss_pred hhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchhhhh
Confidence 445555555555542 122333455555555555555544333332334444444444444432222233344555555
Q ss_pred EEccCccccc----------cCC--ccccCCCCCcEEEcccccCCCCCCcccccccccceEEcccCcCCCCC-CcccCCc
Q 001838 170 LLLGRNMFHG----------KIP--STLSKCKQLEGLYLRFNNLSGAIPKEIGNLTKLKDIILNDNELRGEI-PQEMGNL 236 (1007)
Q Consensus 170 L~Ls~N~l~~----------~~p--~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l 236 (1007)
|++|.|.+.- ..| .++..++.++.+.++-|++...+| ++..+.+..|.+...- ...+..+
T Consensus 151 lHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~Fp-------nv~sv~v~e~PlK~~s~ek~se~~ 223 (418)
T KOG2982|consen 151 LHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRIFP-------NVNSVFVCEGPLKTESSEKGSEPF 223 (418)
T ss_pred hhhccchhhhhccccccccccchhhhhhhcCCcHHHHHHHHHhHHhhcc-------cchheeeecCcccchhhcccCCCC
Confidence 5555553221 000 012333444445555555554333 4555666666555322 2345556
Q ss_pred cccceeeccCcccccccc-ccccCCCCCCeEEcccccccCcC
Q 001838 237 PYLVRLTLATNNLVGVVP-FTIFNMSTLKKLSLLENTLWGSL 277 (1007)
Q Consensus 237 ~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~l 277 (1007)
+.+.-|+|+.|+|-..-. ..+..+++|..|.+++|.++..+
T Consensus 224 p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d~l 265 (418)
T KOG2982|consen 224 PSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSDPL 265 (418)
T ss_pred CcchhhhhcccccccHHHHHHHcCCchhheeeccCCcccccc
Confidence 666677777777754322 33556677777777777765444
No 493
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.07 E-value=2.6e-05 Score=75.69 Aligned_cols=121 Identities=21% Similarity=0.364 Sum_probs=86.9
Q ss_pred ceecccCceEEEEEEEcCCceEEEEE-echhh-------HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEEEe
Q 001838 732 NLLGIGSFGSVYVARLQDGMEVAVKV-FHQRY-------ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIMEY 803 (1007)
Q Consensus 732 ~~ig~G~~g~Vy~~~~~~g~~vavK~-~~~~~-------~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~ 803 (1007)
..+++|+-+.+|.+.+. |.++++|. +.+.. .-..++-.+|+.++++++--.|-.-+=+..+++...|||||
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 35789999999999775 44566664 22211 11235678899999998754444444455666777899999
Q ss_pred cCCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc-----------ccceeecceec
Q 001838 804 MPNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA-----------HISDFSIAKFL 864 (1007)
Q Consensus 804 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~-----------kl~DFGla~~~ 864 (1007)
++|-.|.+.+... +..++..|-+-+.-| |..+|+|.|+. .++|||+++.-
T Consensus 81 I~G~~lkd~l~~~--------~~~~~r~vG~~vg~l---H~~givHGDLTtsNiIl~~~~i~~IDfGLg~~s 141 (204)
T COG3642 81 IEGELLKDALEEA--------RPDLLREVGRLVGKL---HKAGIVHGDLTTSNIILSGGRIYFIDFGLGEFS 141 (204)
T ss_pred eCChhHHHHHHhc--------chHHHHHHHHHHHHH---HhcCeecCCCccceEEEeCCcEEEEECCccccc
Confidence 9999999888764 244666777777888 78899998763 68999999853
No 494
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.05 E-value=5.7e-05 Score=83.70 Aligned_cols=162 Identities=17% Similarity=0.187 Sum_probs=101.5
Q ss_pred ceEEEEEEEc-CCceEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeEEEEEEec----CCeeEEEEEecCC-CChhHh
Q 001838 739 FGSVYVARLQ-DGMEVAVKVFHQRYERALKSFQDECEVMKRIRHRNLVKIISACSN----DDFKALIMEYMPN-GSLENR 812 (1007)
Q Consensus 739 ~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~~~lv~E~~~~-gsL~~~ 812 (1007)
-.+.||++.. ||..|+.|+++.........-..-++.++++.|+|||++.++|.. +...++||+|.++ ++|.+.
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~ 368 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL 368 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence 3578999754 899999999943322111122345788999999999999998873 3468999999986 677765
Q ss_pred hhc--------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceec--cccccceeecceecCCCCcccccccc
Q 001838 813 LYS--------------GTCMLDIFQRLNIMIDVALALEYLHFGHSTPIIHY--MVAHISDFSIAKFLNGQDQLSMQTQT 876 (1007)
Q Consensus 813 l~~--------------~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~--~~~kl~DFGla~~~~~~~~~~~~~~~ 876 (1007)
... .....++...+.++.|+..||.++| +.|..-+ +..||.-.|--|..- ..
T Consensus 369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIH---ssGLAck~L~~~kIlv~G~~RIri---------S~ 436 (655)
T KOG3741|consen 369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIH---SSGLACKTLDLKKILVTGKMRIRI---------SG 436 (655)
T ss_pred HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHH---hcCceeecccHhHeEeeCcceEEE---------ec
Confidence 431 1224677889999999999999996 3343332 222333333211110 00
Q ss_pred cCCcccc--cc-cccccCCCCchhhHHHHHHHHHHHHhCCCC
Q 001838 877 LATIGYM--AP-EYGVQGRVSTRGDVYSYGIMLMETFTGKKP 915 (1007)
Q Consensus 877 ~gt~~y~--aP-E~~~~~~~~~~~DvwS~Gvil~elltG~~p 915 (1007)
+|-..-. .| |-+.. -.+-|.=.||.+++.|.||..-
T Consensus 437 C~i~Dvl~~d~~~~le~---~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 437 CGIMDVLQEDPTEPLES---QQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred ccceeeecCCCCcchhH---HhhhhHHHHHHHHHHHhhcccc
Confidence 1100000 11 11111 2367999999999999999653
No 495
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.00 E-value=1.8e-05 Score=83.00 Aligned_cols=109 Identities=17% Similarity=0.184 Sum_probs=85.3
Q ss_pred cceecccCceEEEEEEEcCCceEEEEEechhhH-HHHHHHHHHHHHHHhcCC--CceeEEEEEEecC---CeeEEEEEec
Q 001838 731 NNLLGIGSFGSVYVARLQDGMEVAVKVFHQRYE-RALKSFQDECEVMKRIRH--RNLVKIISACSND---DFKALIMEYM 804 (1007)
Q Consensus 731 ~~~ig~G~~g~Vy~~~~~~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H--~niv~l~~~~~~~---~~~~lv~E~~ 804 (1007)
.+.++.|..+.||+++..+|+.+++|+...... .....+..|+++++.+++ ..+.+++.+.... +..++||||+
T Consensus 3 ~~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i 82 (223)
T cd05154 3 VRQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERV 82 (223)
T ss_pred ceecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEe
Confidence 357899999999999987778999999765322 123567899999999975 4457777777654 2568999999
Q ss_pred CCCChhHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 001838 805 PNGSLENRLYSGTCMLDIFQRLNIMIDVALALEYLHF 841 (1007)
Q Consensus 805 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~yLH~ 841 (1007)
+|+++.+.+.. ..++..++..++.++++++.+||.
T Consensus 83 ~G~~l~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~ 117 (223)
T cd05154 83 DGRVLRDRLLR--PELSPEERRALARALADTLAALHS 117 (223)
T ss_pred CCEecCCCCCC--CCCCHHHHHHHHHHHHHHHHHHhC
Confidence 99988876542 246778888999999999999974
No 496
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=97.94 E-value=2.4e-06 Score=86.29 Aligned_cols=41 Identities=27% Similarity=0.384 Sum_probs=19.9
Q ss_pred ccCCCCCCEEEcCCCCCCCCCCcccc----CcccCcEEeccCccc
Q 001838 88 LGNLSSLETLDLSHNKLSGNIPSSIF----NMHTLKLLDFRDNQL 128 (1007)
Q Consensus 88 l~~l~~L~~LdLs~N~l~~~~p~~~~----~l~~L~~L~Ls~N~l 128 (1007)
+..+++|+..|||.|.|....|..++ .-..|++|.|++|.+
T Consensus 88 Llkcp~l~~v~LSDNAfg~~~~e~L~d~is~~t~l~HL~l~NnGl 132 (388)
T COG5238 88 LLKCPRLQKVDLSDNAFGSEFPEELGDLISSSTDLVHLKLNNNGL 132 (388)
T ss_pred HhcCCcceeeeccccccCcccchHHHHHHhcCCCceeEEeecCCC
Confidence 34445555555555555544443322 234455555555554
No 497
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=97.90 E-value=7.6e-05 Score=71.96 Aligned_cols=130 Identities=16% Similarity=0.192 Sum_probs=90.6
Q ss_pred ccceecccCceEEEEEEEcCCceEEEE-Eechhh-------HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCeeEEEE
Q 001838 730 KNNLLGIGSFGSVYVARLQDGMEVAVK-VFHQRY-------ERALKSFQDECEVMKRIRHRNLVKIISACSNDDFKALIM 801 (1007)
Q Consensus 730 ~~~~ig~G~~g~Vy~~~~~~g~~vavK-~~~~~~-------~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 801 (1007)
....+-+|+-+.|+++.+. |+...|| ++.+.. .-..++..+|++++.+++--.|.--.=++.+...-.|+|
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 4678889999999999986 6666666 333221 123466788999999987545544444555556667999
Q ss_pred EecCC-CChhHhhhcCCC-CCCHHHHHHHHHHHHHHHHHHHhcCCCCceecccc---------------ccceeeccee
Q 001838 802 EYMPN-GSLENRLYSGTC-MLDIFQRLNIMIDVALALEYLHFGHSTPIIHYMVA---------------HISDFSIAKF 863 (1007)
Q Consensus 802 E~~~~-gsL~~~l~~~~~-~l~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~~~~---------------kl~DFGla~~ 863 (1007)
||.+| -++.+++..... ..+.......+..|-+.+.-| |...|+|.|+. .++|||++..
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igkl---H~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKL---HDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHh---hhCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence 99987 477888765432 222223356888899999999 78889998652 5789998764
No 498
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=97.88 E-value=0.00019 Score=77.55 Aligned_cols=261 Identities=14% Similarity=0.104 Sum_probs=146.1
Q ss_pred ccceecccCceEEEEEEEcCCceEEEEEechhhHHHHHHHHHHHHHHHhc-CCCceeEEEEEE------ecCC-eeEEEE
Q 001838 730 KNNLLGIGSFGSVYVARLQDGMEVAVKVFHQRYERALKSFQDECEVMKRI-RHRNLVKIISAC------SNDD-FKALIM 801 (1007)
Q Consensus 730 ~~~~ig~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~------~~~~-~~~lv~ 801 (1007)
..+.+|+|+-+.+|----- +. -+.|++......... ..++.|.+. .||-+-.=+.|= -+++ ..-+.|
T Consensus 15 ~gr~LgqGgea~ly~l~e~-~d-~VAKIYh~Pppa~~a---qk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflm 89 (637)
T COG4248 15 PGRPLGQGGEADLYTLGEV-RD-QVAKIYHAPPPAAQA---QKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLM 89 (637)
T ss_pred CCccccCCccceeeecchh-hc-hhheeecCCCchHHH---HHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEec
Confidence 3577999999999943211 22 344777644322111 123334444 466443311111 1122 256777
Q ss_pred EecCCCC-hhHhhh-----cCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCceeccccccceeecceecCCCCcc----
Q 001838 802 EYMPNGS-LENRLY-----SGTCMLDIFQRLNIMIDVALALEYLHF-GHSTPIIHYMVAHISDFSIAKFLNGQDQL---- 870 (1007)
Q Consensus 802 E~~~~gs-L~~~l~-----~~~~~l~~~~~~~i~~~ia~~l~yLH~-~~~~~ivH~~~~kl~DFGla~~~~~~~~~---- 870 (1007)
..+++.. ...++. +.-...+|.-.++++..+|.+.+-||. +|..+=|.-...-++|=|..+.+..++..
T Consensus 90 P~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi~~n 169 (637)
T COG4248 90 PKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQINAN 169 (637)
T ss_pred ccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEcccceeeccC
Confidence 7776642 222222 112357899999999999999999973 44444333333457777777666543221
Q ss_pred -cccccccCCcccccccccc-----cCCCCchhhHHHHHHHHHHHHhC-CCCCCccccCcc---hHH-HHHHhhcCccHH
Q 001838 871 -SMQTQTLATIGYMAPEYGV-----QGRVSTRGDVYSYGIMLMETFTG-KKPTDEIFIGEL---SLS-RWVNDLLPISVM 939 (1007)
Q Consensus 871 -~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwS~Gvil~elltG-~~p~~~~~~~~~---~l~-~~~~~~~~~~~~ 939 (1007)
......+|...|.+||.-. +-.-+...|-|.+||++++++.| +.||.+...... ... +...........
T Consensus 170 g~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ya~~ 249 (637)
T COG4248 170 GTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFAYASD 249 (637)
T ss_pred CceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceeeechh
Confidence 1123356888999999643 23457789999999999999886 999986532110 010 111000000000
Q ss_pred HHhhhhhccchhhhHHHHHHHHHHHHHHHhhcCCCC--CCCCCCHHHHHHHHHHHHHHhhhc
Q 001838 940 EVIDTNLLSGEERYFAAKEQSLLSILNLATECTIES--PGKRINAREIVTGLLKIRDTLVKS 999 (1007)
Q Consensus 940 ~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~--p~~Rpt~~evl~~L~~i~~~~~~~ 999 (1007)
. ..-++... .....+-.+.++..+-.+|.... +.-|||++.-+..|.+++..+.++
T Consensus 250 ~--~~g~~p~P--~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L~~C 307 (637)
T COG4248 250 Q--RRGLKPPP--RSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQLKKC 307 (637)
T ss_pred c--cCCCCCCC--CCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhhhhh
Confidence 0 00000000 00011122345666667787654 568999999999999999988876
No 499
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=97.82 E-value=1.9e-06 Score=86.92 Aligned_cols=197 Identities=18% Similarity=0.244 Sum_probs=120.6
Q ss_pred cccccccccccEEEccCCCCCCCCCCCcccc---ccccceeeeccccccccCCh----hh---------hccCCCcEEEc
Q 001838 356 LSSLTNCQKIRVLILAGNPLDGILPSSIGNL---SISLERFQMFNCRISGKIPQ----VI---------SNLSNLLLLDL 419 (1007)
Q Consensus 356 l~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l---~~~l~~L~l~~n~l~~~~p~----~~---------~~l~~L~~L~L 419 (1007)
++.+..|++|+.++||.|.|....|+.+..+ ...+.+|.+++|.+...--. ++ .+-+.|++.+.
T Consensus 85 l~aLlkcp~l~~v~LSDNAfg~~~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vic 164 (388)
T COG5238 85 LKALLKCPRLQKVDLSDNAFGSEFPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVIC 164 (388)
T ss_pred HHHHhcCCcceeeeccccccCcccchHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEe
Confidence 3466778888888888888877766665543 23578888888877532211 11 23468999999
Q ss_pred cCCeeccccc----hhhhhccccCccccCCCccCCC-----CchhhhcccccceeecccccccCC----CCCCCCCcccC
Q 001838 420 GGNKLTGSIP----VTFSRLLNLQGLGLAFNKLARS-----IPDEICHLAKLDKLILHGNKFSGA----IPSCSGNLTSL 486 (1007)
Q Consensus 420 s~N~l~~~~p----~~~~~l~~L~~L~Ls~N~l~~~-----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L 486 (1007)
..|++..-.- ..+..-.+|+.+.+.+|-+.-. +-..+..+.+|+.|||..|-|+-. +...+..++.|
T Consensus 165 grNRlengs~~~~a~~l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~~l 244 (388)
T COG5238 165 GRNRLENGSKELSAALLESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWNLL 244 (388)
T ss_pred ccchhccCcHHHHHHHHHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccchh
Confidence 9999964322 1233345889999999976421 111234578899999999988732 22334456668
Q ss_pred ceeecCCcccccCCCcccc------cccccccccCCCCCcCCCCccccccccccceEeCccccCCCCccccccCCCCccE
Q 001838 487 RALYLGSNRFTSALPSTIW------NLKDILFFDVSSNSLDGPLSLDIGNLKVVIELNLSRNNLSGDIPITIGGLKNLQK 560 (1007)
Q Consensus 487 ~~L~Ls~N~l~~~~p~~~~------~l~~L~~Ldls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 560 (1007)
+.|.+..|-++..-...+. ..++|..|-..+|...+.+- ++.+-|.+. =..++-|..
T Consensus 245 rEL~lnDClls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~~~~~i-----------~~~~l~~~e------~~~~p~L~~ 307 (388)
T COG5238 245 RELRLNDCLLSNEGVKSVLRRFNEKFVPNLMPLPGDYNERRGGII-----------LDISLNEFE------QDAVPLLVD 307 (388)
T ss_pred hhccccchhhccccHHHHHHHhhhhcCCCccccccchhhhcCcee-----------eeechhhhh------hcccHHHHH
Confidence 8888888877654333221 13455555556665544321 222222221 134556777
Q ss_pred Eeccccccc
Q 001838 561 LFLANNRLE 569 (1007)
Q Consensus 561 L~Ls~N~l~ 569 (1007)
|-+.+|+|+
T Consensus 308 le~ngNr~~ 316 (388)
T COG5238 308 LERNGNRIK 316 (388)
T ss_pred HHHccCcch
Confidence 777788876
No 500
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.77 E-value=1.6e-05 Score=58.77 Aligned_cols=36 Identities=47% Similarity=0.704 Sum_probs=17.8
Q ss_pred CccEEeccccccccccCccCcCCCCCCEEECCCCccc
Q 001838 557 NLQKLFLANNRLEGPIPESFSGLSSLEILDLSKNKIS 593 (1007)
Q Consensus 557 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~ 593 (1007)
+|++|++++|+|+ .+|..+++|++|+.||+++|+|+
T Consensus 2 ~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 2 NLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp T-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred cceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 4555555555555 33444555555555555555554
Done!