BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001839
(1007 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9M2T1|AP3BA_ARATH AP3-complex subunit beta-A OS=Arabidopsis thaliana GN=AP3BA PE=2 SV=2
Length = 987
Score = 1123 bits (2904), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 591/1014 (58%), Positives = 747/1014 (73%), Gaps = 41/1014 (4%)
Query: 1 MAGIRLHVISPLVLVAVGKCARDPSVFVRKCAANALPKLHELRQEEITSAIEEIVGILLN 60
MAGIRLHVI+PL L AV KCARDP+V+VR+CAANALPKLH+LR EE SAIEE+VGILLN
Sbjct: 1 MAGIRLHVIAPLALAAVSKCARDPAVYVRRCAANALPKLHDLRLEEHASAIEELVGILLN 60
Query: 61 DRSPGVVGAAAAAFASICPNNFTLIGRNYRNLCQILPDVEEWGQILLIEILLRYVVASHG 120
D SPGVVGAAAAAF SICPNNF LIG+NY+ LCQILPDVEEWGQILLI LLRYVVA HG
Sbjct: 61 DHSPGVVGAAAAAFTSICPNNFKLIGKNYKKLCQILPDVEEWGQILLIGTLLRYVVARHG 120
Query: 121 LVKESIMSSLLCIESS-HSEKDVFDVNVALE-DNGIPSRTYDSELVNLVSRSYIEGLGEY 178
LV+ES+M S+ S+ EKD ++ L+ ++G S ++D LV+LVS+ YI+G EY
Sbjct: 121 LVRESLMLSIHGTNSNGFCEKDGLGRDLTLDKEDGGKSDSFDVNLVSLVSKCYIQGPDEY 180
Query: 179 LTRSSDTNARSSDLNGARFTSGKTNDDVKLLLQCTSPLLWSHNSAVVLAAAGVHWIMSPK 238
L+RSS T+ SS + TS N+DVK+LLQCTSPLLWS+NSAVVLAAAGV WIM+P
Sbjct: 181 LSRSSCTDTVSSAFDTKETTSIAHNEDVKILLQCTSPLLWSNNSAVVLAAAGVQWIMAPL 240
Query: 239 EDVKRIVKPLLFILRSSGASKYVVLCNIQVFAKALPHLFVPHYEDFFVSSSDSYQSKALK 298
EDVK+IVKPLLF+LRSS ASKYVVLCNI VFAKA+P LF PH+E+FF+ SSD+YQ KA K
Sbjct: 241 EDVKKIVKPLLFLLRSSSASKYVVLCNILVFAKAVPSLFAPHFENFFICSSDAYQVKAYK 300
Query: 299 LEILSSIVTESSISSVFKEFQDYIRDPDRRFAADTVAAIGLCARKLPKMANTCVEGLLAL 358
LE+LS I T SSI+S+ +EF+DYI+DPDRRFAADTVAAIGLCA++L + TC++GLLAL
Sbjct: 301 LEMLSLIATTSSIASILREFEDYIKDPDRRFAADTVAAIGLCAKRLMTIPTTCLDGLLAL 360
Query: 359 IRQELLTSDIESGNGEADVLIQSIISIKSIIKQDPSCHEK----LFRSLDSIKVPEARVM 414
+RQE D ES +GEA VL+Q+++SI+++I++DP HEK LFRSLDSIKV AR
Sbjct: 361 VRQESFAGDFESADGEAGVLVQAVMSIQTMIERDPLRHEKVLIQLFRSLDSIKVAAARAT 420
Query: 415 IIWMVGEYSSVGVKIPRMLTTVLKYLAWCFKSEAVETKLQILNTTIKVLLCAKGGDMWTI 474
IIWMVG Y S+G IPRMLTT+ KYLAW FKSEA ETKLQILNT KVL+ A+ GD +
Sbjct: 421 IIWMVGVYCSLGHIIPRMLTTITKYLAWSFKSEASETKLQILNTIAKVLISAEAGDFHML 480
Query: 475 TRLFSYLLELAECDLNYDVRDRARFFKKLFSHNLCSQVP-EETNALQENKDLPLVLVECI 533
R+ Y+ EL E DL+YD+RDR RF KKL S L S P E++ A QEN + +VE +
Sbjct: 481 KRIVVYVFELGEYDLSYDIRDRTRFLKKLLSCKLASHEPAEDSVASQEN--IAAHVVEHV 538
Query: 534 FRKQENLAASEPINDRFYLPGSLSQIVLHAAPGYEPLPKPCSSLCDDLGQFSNSIDRTTA 593
F ++ + +++RFYLPGSLSQIVLHAAPGYEPLPKPCS + ++ Q S+ +D+
Sbjct: 539 FGRKLKSVSPITLHNRFYLPGSLSQIVLHAAPGYEPLPKPCSFVYEEQDQLSD-LDKQRE 597
Query: 594 LGEEWTGSSSNGTDDPDTSGSLDEESGSNYDSQQSIPGLSDNSGTGDS---ASEGDRNCD 650
+ GS ++S + DE S+YDS+ S SD S GD +++ +
Sbjct: 598 AAADLDGSE-------ESSETGDENGSSDYDSESS--NGSDFSSEGDERTVSNDANDPAA 648
Query: 651 PLIQISDAGIACSNENGASHSGFPDLEGMMSKRALESWLDEQPGSSSPSASEQIQVRQSS 710
PLIQIS+ ++ D E + S+RAL+ WLD+QP +S+ + S + S
Sbjct: 649 PLIQISETSVSA------------DQEELRSRRALDLWLDDQPSTSNQTPSALNSNQSSY 696
Query: 711 ARISIGNIGRQVKAKSYTLLDPANGNGLKVYYSFSSEASTISPQLVCLETFFENCSSETM 770
A+ISIG++G +VK KSY+L+DP NG+GLKV Y+F SE S +SP VC+E FEN S+E +
Sbjct: 697 AKISIGDVGSRVKPKSYSLVDPGNGSGLKVDYAFLSEVSNVSPLHVCVEVLFENSSAEPI 756
Query: 771 SEVTLVDEESHKALDLADLTLATTASSLTSQSDLPTLVPMEEITSLEPGQTMKRILEVRF 830
EV L DEES K D ++ TL A++ S +++PTL+PMEEI+ LEP Q+ KR+++VRF
Sbjct: 757 LEVNLEDEESMKVADSSEQTLVGKANA--SYNNIPTLIPMEEISCLEPHQSTKRLIQVRF 814
Query: 831 HHHLLPLKLALHCNGKKLPVKLRPDIGYFIKPVPMDMETFIEMESRLPGMFEYARSCTFT 890
HHHLLP++L LH N KK+PVKLRPD+GY +KP M +E F+ ESRLPGMFEY+R CTF
Sbjct: 815 HHHLLPMRLTLHYNEKKVPVKLRPDLGYLVKPFSMSIEEFLATESRLPGMFEYSRRCTFD 874
Query: 891 DHLGEVDKDTDESSLLKDKYLVICESLASKMLSNANIFLVSVDMPVAAKFDDASGLSLRF 950
DH+ D T+ KDK+L ICES+ K+LSN+N+ LVSVD+PVA +DA+GL LRF
Sbjct: 875 DHVK--DSRTENG---KDKFLSICESITLKVLSNSNLHLVSVDLPVANSLEDATGLRLRF 929
Query: 951 SSEILGNSVPCLITITVEGKCSEPLKVSAKVNCEETVFGLNLLNRIVNFLVESS 1004
SS+IL + +P LITITVEGKC+E L ++ K+NCEETVFGLNLLNRI NF+VE S
Sbjct: 930 SSKILSSEIPLLITITVEGKCTEVLNLTVKINCEETVFGLNLLNRIANFMVEPS 983
>sp|Q13367|AP3B2_HUMAN AP-3 complex subunit beta-2 OS=Homo sapiens GN=AP3B2 PE=1 SV=2
Length = 1082
Score = 289 bits (739), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 193/582 (33%), Positives = 311/582 (53%), Gaps = 84/582 (14%)
Query: 1 MAGIRLHVISPLVLVAVGKCARDPSVFVRKCAANALPKLHELRQEEITSAIEEIVGILLN 60
++ IR+ +I P++++A+ + A D S +VRK AA+A+PKL+ L ++ IE ++ LL
Sbjct: 134 LSSIRVPIIVPIMMLAIKEAASDMSPYVRKTAAHAIPKLYSLDSDQKDQLIE-VIEKLLA 192
Query: 61 DRSPGVVGAAAAAFASICPNNFTLIGRNYRNLCQILPDVEEWGQILLIEILLRYVVASHG 120
D++ V G+ AF +CP LI +NYR LC +L DVEEWGQ+++I +L RY A
Sbjct: 193 DKTTLVAGSVVMAFEEVCPERIDLIHKNYRKLCNLLIDVEEWGQVVIISMLTRY--ARTQ 250
Query: 121 LVKESIMSSLLCIESSHSEKDVFDVNVALEDNGIPSRTYDSELVNLVSRSYIEGLGEYLT 180
+ + SLL ++EK + ED +G G T
Sbjct: 251 FLSPTQNESLL---EENAEKAFYGSE---EDEA-------------------KGAGSEET 285
Query: 181 RSSDTNARSSDLNGARFTSGKTNDDVKLLLQCTSPLLWSHNSAVVLAAAGVHWIMSPKED 240
++ +R + + D +LLL+ T PLL S ++AVV+A A +++ ++PK +
Sbjct: 286 AAAAAPSRKPYV---------MDPDHRLLLRNTKPLLQSRSAAVVMAVAQLYFHLAPKAE 336
Query: 241 VKRIVKPLLFILRSSGASKYVVLCNIQVFAKALPHLFVPHYEDFFVSSSDSYQSKALKLE 300
V I K L+ +LRS +YVVL N+ + +F P+ + F++ S+D Q K LKLE
Sbjct: 337 VGVIAKALVRLLRSHSEVQYVVLQNVATMSIKRRGMFEPYLKSFYIRSTDPTQIKILKLE 396
Query: 301 ILSSIVTESSISSVFKEFQDYIRDPDRRFAADTVAAIGLCARKLPKMANTCVEGLLALIR 360
+L+++ E++I +V +EFQ YIR D+ F A T+ AIG CA + ++ +TC+ GL+ L+
Sbjct: 397 VLTNLANETNIPTVLREFQTYIRSMDKDFVAATIQAIGRCATNIGRVRDTCLNGLVQLL- 455
Query: 361 QELLTSDIESGNGEADVLIQSIISIKSIIKQDPSCHEKLFRSL----DSIKVPEARVMII 416
N + V+ +S++ IK +++ P+ H ++ + L D+I+VP AR I+
Sbjct: 456 ----------SNRDELVVAESVVVIKKLLQMQPAQHGEIIKHLAKLTDNIQVPMARASIL 505
Query: 417 WMVGEYSSVGVKIPRMLTTVLKYLAWCFKSEAVETKLQILNTTIKVLLCAKGGDMWTITR 476
W++GEY +PR+ VL+ +A F +E KLQ++N K+ L +
Sbjct: 506 WLIGEYCE---HVPRIAPDVLRKMAKSFTAEEDIVKLQVINLAAKLYLT----NSKQTKL 558
Query: 477 LFSYLLELAECDLNYDVRDRARFFKKLFSHNLCSQVP-EETNALQEN-KDL-----PLVL 529
L Y+L LA+ D NYD+RDRARF ++L VP E+ AL + K L P +
Sbjct: 559 LTQYVLSLAKYDQNYDIRDRARFTRQLI-------VPSEQGGALSRHAKKLFLAPKPAPV 611
Query: 530 VECIFRKQENLAASEPINDRFYLPGSLSQIVLHAAPGYEPLP 571
+E F+ + D F L GSLS ++ A GY+ LP
Sbjct: 612 LESSFKDR----------DHFQL-GSLSHLLNAKATGYQELP 642
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 65/177 (36%), Gaps = 27/177 (15%)
Query: 715 IGNIGRQVKAKSYTLLDPANGNGLKVYYSFSSEASTISPQLVCLETFFENCSSETMSEVT 774
+ +GRQ LL G GL V Y+FS + + P +V + F N S +
Sbjct: 854 VSGVGRQ------ELLHRVAGEGLAVDYTFSRQPFSGDPHMVSVHIHFSNSSDTPI---- 903
Query: 775 LVDEESHKALDLADLTLATTASSLTSQSDLPTLVPMEEITSLEPGQTMKRILEVRFHHHL 834
K L + L S + EI SL PG++ ++ + F
Sbjct: 904 -------KGLHVGTPKLPAGIS----------IQEFPEIESLAPGESATAVMGINFCDST 946
Query: 835 LPLKLALHCNGKKLPVKLRPDIGYFIKPVPMDMETFIEMESRLPGMFEYARSCTFTD 891
L ++ V ++P +G + PV M F + + +L GM E D
Sbjct: 947 QAANFQLCTQTRQFYVSIQPPVGELMAPVFMSENEFKKEQGKLMGMNEITEKLMLPD 1003
>sp|Q9JME5|AP3B2_MOUSE AP-3 complex subunit beta-2 OS=Mus musculus GN=Ap3b2 PE=1 SV=2
Length = 1082
Score = 285 bits (729), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 195/584 (33%), Positives = 313/584 (53%), Gaps = 88/584 (15%)
Query: 1 MAGIRLHVISPLVLVAVGKCARDPSVFVRKCAANALPKLHELRQEEITSAIEEIVGILLN 60
++ IR+ +I P++++A+ + A D S +VRK AA+A+PKL+ L ++ IE ++ LL
Sbjct: 134 LSSIRVPIIVPIMMLAIKEAASDMSPYVRKTAAHAIPKLYSLDSDQKDQLIE-VIEKLLA 192
Query: 61 DRSPGVVGAAAAAFASICPNNFTLIGRNYRNLCQILPDVEEWGQILLIEILLRYVVASHG 120
D++ V G+ AF +CP LI +NYR LC +L DVEEWGQ+++I +L RY A
Sbjct: 193 DKTTLVAGSVVMAFEEVCPERIDLIHKNYRKLCNLLIDVEEWGQVVIISMLTRY--ARTQ 250
Query: 121 LVKESIMSSLLCIESSHSEKDVFDVNVALEDNGIPSRT-YDSELVNLVSRSYIEGLGEYL 179
+ + SLL E+N P + Y SE +G G
Sbjct: 251 FLSPTQNESLL------------------EEN--PEKAFYGSE------EDEAKGPGSEE 284
Query: 180 TRSSDTNARSSDLNGARFTSGKTNDDVKLLLQCTSPLLWSHNSAVVLAAAGVHWIMSPKE 239
++ AR + + D +LLL+ T PLL S ++AVV+A A +++ ++PK
Sbjct: 285 AATAALPARKPYV---------MDPDHRLLLRNTKPLLQSRSAAVVMAVAQLYFHLAPKA 335
Query: 240 DVKRIVKPLLFILRSSGASKYVVLCNIQVFAKALPHLFVPHYEDFFVSSSDSYQSKALKL 299
+V I K L+ +LRS +YVVL N+ + +F P+ + F++ S+D Q K LKL
Sbjct: 336 EVGVIAKALVRLLRSHSEVQYVVLQNVATMSIKRRGMFEPYLKSFYIRSTDPTQIKILKL 395
Query: 300 EILSSIVTESSISSVFKEFQDYIRDPDRRFAADTVAAIGLCARKLPKMANTCVEGLLALI 359
E+L+++ E++I +V +EFQ YIR D+ F A T+ AIG CA + ++ +TC+ GL+ L+
Sbjct: 396 EVLTNLANETNIPTVLREFQTYIRSMDKDFVAATIQAIGRCATNIGRVRDTCLNGLVQLL 455
Query: 360 RQELLTSDIESGNGEADVLIQSIISIKSIIKQDPSCHEKLFRSL----DSIKVPEARVMI 415
N + V+ +S++ IK +++ P+ H ++ + L D+I+VP AR I
Sbjct: 456 -----------SNRDELVVAESVVVIKKLLQMQPAQHGEIIKHLAKLTDNIQVPMARASI 504
Query: 416 IWMVGEYSSVGVKIPRMLTTVLKYLAWCFKSEAVETKLQILNTTIKVLLC-AKGGDMWTI 474
+W++GEY +P++ VL+ +A F +E KLQ++N K+ L +K + T
Sbjct: 505 LWLIGEYCE---HVPKIAPDVLRKMAKSFTAEEDIVKLQVINLAAKLYLTNSKQTKLLT- 560
Query: 475 TRLFSYLLELAECDLNYDVRDRARFFKKLFSHNLCSQVP-EETNALQEN-KDL-----PL 527
Y+L LA+ D NYD+RDRARF ++L VP E+ AL + K L P
Sbjct: 561 ----QYVLSLAKYDQNYDIRDRARFTRQLI-------VPSEQGGALSRHAKKLFLAPKPA 609
Query: 528 VLVECIFRKQENLAASEPINDRFYLPGSLSQIVLHAAPGYEPLP 571
++E F+ + D F L GSLS ++ A GY+ LP
Sbjct: 610 PILESSFKDR----------DHFQL-GSLSHLLNAKATGYQELP 642
>sp|Q32PG1|AP3B1_BOVIN AP-3 complex subunit beta-1 OS=Bos taurus GN=AP3B1 PE=2 SV=1
Length = 1084
Score = 285 bits (729), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 202/624 (32%), Positives = 316/624 (50%), Gaps = 104/624 (16%)
Query: 1 MAGIRLHVISPLVLVAVGKCARDPSVFVRKCAANALPKLHELRQEEITSAIEEIVGILLN 60
++ IR+ +I P++++A+ + + D S +VRK AA+A+ KL+ L E+ IE I+ LL
Sbjct: 139 LSSIRVPIIVPIMMLAIKEASADLSPYVRKNAAHAIQKLYSLDPEQKEMLIE-IIEKLLK 197
Query: 61 DRSPGVVGAAAAAFASICPNNFTLIGRNYRNLCQILPDVEEWGQILLIEILLRYVVASHG 120
D+S V G+ AF +CP+ LI +NYR LC +L DVEEWGQ+++I +L RY A
Sbjct: 198 DKSTLVAGSVVMAFEEVCPDRIDLIHKNYRKLCNLLVDVEEWGQVVIIHMLTRY--ARTQ 255
Query: 121 LVKESIMSSLLCIESSHSEKDVFDVNVALEDNGIPSRTYDSELVNLVSRSYIEGLGEYLT 180
V S + DV LEDN YDS+ E
Sbjct: 256 FV------------SPWRQGDV------LEDN--EKDFYDSD--------------EEQK 281
Query: 181 RSSDTNARSSDLNGARFTSGKTNDDVKLLLQCTSPLLWSHNSAVVLAAAGVHWIMSPKED 240
+D R ++ D +LL++ T PLL S N+AVV+A A ++W ++PK +
Sbjct: 282 EKADKRKRPYAMD----------PDHRLLIRNTKPLLQSRNAAVVMAVAQLYWHIAPKSE 331
Query: 241 VKRIVKPLLFILRSSGASKYVVLCNIQVFAKALPHLFVPHYEDFFVSSSDSYQSKALKLE 300
I K L+ +LRSS +Y+VL NI + +F P+ + F+V S+D+ K LKLE
Sbjct: 332 AGIISKSLVRLLRSSREVQYIVLQNIATMSIQRKGMFEPYLKSFYVRSTDATMIKILKLE 391
Query: 301 ILSSIVTESSISSVFKEFQDYIRDPDRRFAADTVAAIGLCARKLPKMANTCVEGLLALIR 360
IL+++ E++IS++ +EFQ Y++ D++FAA T+ IG CA + ++++TC+ GL+ L+
Sbjct: 392 ILTNLANEANISTLLREFQTYVKSQDKQFAAATIQTIGRCATSITEVSDTCLNGLVCLL- 450
Query: 361 QELLTSDIESGNGEADVLIQSIISIKSIIKQDPSCHEKLFRS----LDSIKVPEARVMII 416
N + V+ +S++ IK +++ P H ++ + LDSI VP AR I+
Sbjct: 451 ----------SNRDEIVVAESVVVIKKLLQMQPMQHGEIIKHMAKLLDSITVPVARASIL 500
Query: 417 WMVGEYSSVGVKIPRMLTTVLKYLAWCFKSEAVETKLQILNTTIKVLLCAKGGDMWTITR 476
W++GE ++P++ VL+ A F SE KLQILN K+ L T+
Sbjct: 501 WLIGENCE---RVPKIAPDVLRKTAKSFTSEDDLVKLQILNLGAKLYLTNSKQ-----TK 552
Query: 477 LFS-YLLELAECDLNYDVRDRARFFKKLFSHNLCSQVPEETNALQENKDLPLVLVECIFR 535
L + Y+L L + D NYD+RDR RF ++L N E++ AL + + IF
Sbjct: 553 LLTQYILNLGKYDQNYDIRDRTRFIRQLIVPN------EKSGALSK-------YAKKIFL 599
Query: 536 KQENLAASE-PINDRFYLP-GSLSQIVLHAAPGY-------EPLPKPCSSLCDDLGQFSN 586
Q+ E P DR + G+LS + A GY E P P +
Sbjct: 600 AQKPAPLLESPFKDRDHFQLGTLSHTLNTKATGYLELSNWPEVAPDPSVRNVE------- 652
Query: 587 SIDRTTALGEEWTGSSSNGTDDPD 610
L +EWT + ++PD
Sbjct: 653 ----VIELAKEWTPAGKAKKENPD 672
>sp|Q7YRF1|AP3B1_CANFA AP-3 complex subunit beta-1 OS=Canis familiaris GN=AP3B1 PE=2 SV=1
Length = 1091
Score = 279 bits (714), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 189/574 (32%), Positives = 301/574 (52%), Gaps = 86/574 (14%)
Query: 1 MAGIRLHVISPLVLVAVGKCARDPSVFVRKCAANALPKLHELRQEEITSAIEEIVGILLN 60
++ IR+ +I P++++A+ + + D S +VRK AA+A+ KL+ L E+ IE ++ LL
Sbjct: 139 LSSIRVPIIVPIMMLAIKEASADLSPYVRKNAAHAIQKLYSLDPEQKEMLIE-VIEKLLK 197
Query: 61 DRSPGVVGAAAAAFASICPNNFTLIGRNYRNLCQILPDVEEWGQILLIEILLRYVVASHG 120
D+S V G+ AF +CP+ LI +NYR LC +L DVEEWGQ+++I +L RY A
Sbjct: 198 DKSTLVAGSVVMAFEEVCPDRIDLIHKNYRKLCNLLVDVEEWGQVVIIHMLTRY--ARTQ 255
Query: 121 LVKESIMSSLLCIESSHSEKDVFDVNVALEDNGIPSRTYDSELVNLVSRSYIEGLGEYLT 180
V S E D LEDN +++ E
Sbjct: 256 FV------------SPWKEDD------GLEDN---------------EKNFYE------- 275
Query: 181 RSSDTNARSSDLNGARFTSGKTNDDVKLLLQCTSPLLWSHNSAVVLAAAGVHWIMSPKED 240
S D +D + + D +LL++ T PLL S N+AVV+A A ++W +SPK +
Sbjct: 276 -SDDEQKEKTDQKKKPYA---MDPDHRLLIRNTKPLLQSRNAAVVMAVAQLYWHISPKSE 331
Query: 241 VKRIVKPLLFILRSSGASKYVVLCNIQVFAKALPHLFVPHYEDFFVSSSDSYQSKALKLE 300
V I K L+ +LRS+ +Y+VL NI + + P+ + F+V S+D K LKLE
Sbjct: 332 VGIISKSLVRLLRSNREVQYIVLQNIATMSIQRKGMLEPYLKSFYVRSTDPTMIKILKLE 391
Query: 301 ILSSIVTESSISSVFKEFQDYIRDPDRRFAADTVAAIGLCARKLPKMANTCVEGLLALIR 360
IL+++ E++IS++ +EFQ Y++ D++FAA T+ IG CA + ++ +TC+ GL+ L+
Sbjct: 392 ILTNLANEANISTLLREFQTYVKSQDKQFAAATIQTIGRCATSISEVTDTCLSGLVCLL- 450
Query: 361 QELLTSDIESGNGEADVLIQSIISIKSIIKQDPSCHEKLFRS----LDSIKVPEARVMII 416
N + V+ +S++ IK +++ P+ H ++ + LDSI VP AR I+
Sbjct: 451 ----------SNRDEIVVAESVVVIKKLLQMQPAQHGEIIKHMAKLLDSITVPVARASIL 500
Query: 417 WMVGEYSSVGVKIPRMLTTVLKYLAWCFKSEAVETKLQILNTTIKVLLCAKGGDMWTITR 476
W++GE ++P++ VL+ +A F +E KLQILN K+ L T+
Sbjct: 501 WLIGENCE---RVPKIAPDVLRKMAKSFTNEDDLVKLQILNLGAKLYLTNSKQ-----TK 552
Query: 477 LFS-YLLELAECDLNYDVRDRARFFKKLFSHNLCSQVPEETNALQENKDLPLVLVECIFR 535
L + Y+L L + D NYD+RDR RF ++L N E++ AL + + IF
Sbjct: 553 LLTQYILNLGKYDQNYDIRDRTRFIRQLIVPN------EKSGALSK-------YAKKIFL 599
Query: 536 KQENLAASE-PINDRFYLP-GSLSQIVLHAAPGY 567
Q+ E P DR + G+LS + A GY
Sbjct: 600 AQKPAPLLESPFKDRDHFQLGTLSHTLNTKAIGY 633
>sp|O00203|AP3B1_HUMAN AP-3 complex subunit beta-1 OS=Homo sapiens GN=AP3B1 PE=1 SV=3
Length = 1094
Score = 276 bits (705), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 190/572 (33%), Positives = 300/572 (52%), Gaps = 82/572 (14%)
Query: 1 MAGIRLHVISPLVLVAVGKCARDPSVFVRKCAANALPKLHELRQEEITSAIEEIVGILLN 60
++ IR+ +I P++++A+ + + D S +VRK AA+A+ KL+ L E+ IE ++ LL
Sbjct: 139 LSSIRVPIIVPIMMLAIKEASADLSPYVRKNAAHAIQKLYSLDPEQKEMLIE-VIEKLLK 197
Query: 61 DRSPGVVGAAAAAFASICPNNFTLIGRNYRNLCQILPDVEEWGQILLIEILLRYVVASHG 120
D+S V G+ AF +CP+ LI +NYR LC +L DVEEWGQ+++I +L RY A
Sbjct: 198 DKSTLVAGSVVMAFEEVCPDRIDLIHKNYRKLCNLLVDVEEWGQVVIIHMLTRY--ARTQ 255
Query: 121 LVKESIMSSLLCIESSHSEKDVFDVNVALEDNGIPSRTYDSELVNLVSRSYIEGLGEYLT 180
V S E D LEDNG +++ E
Sbjct: 256 FV------------SPWKEGD------ELEDNG---------------KNFYE------- 275
Query: 181 RSSDTNARSSDLNGARFTSGKTNDDVKLLLQCTSPLLWSHNSAVVLAAAGVHWIMSPKED 240
S D +D +T + D +LL++ T PLL S N+AVV+A A ++W +SPK +
Sbjct: 276 -SDDDQKEKTDKKKKPYT---MDPDHRLLIRNTKPLLQSRNAAVVMAVAQLYWHISPKSE 331
Query: 241 VKRIVKPLLFILRSSGASKYVVLCNIQVFAKALPHLFVPHYEDFFVSSSDSYQSKALKLE 300
I K L+ +LRS+ +Y+VL NI + +F P+ + F+V S+D K LKLE
Sbjct: 332 AGIISKSLVRLLRSNREVQYIVLQNIATMSIQRKGMFEPYLKSFYVRSTDPTMIKTLKLE 391
Query: 301 ILSSIVTESSISSVFKEFQDYIRDPDRRFAADTVAAIGLCARKLPKMANTCVEGLLALIR 360
IL+++ E++IS++ +EFQ Y++ D++FAA T+ IG CA + ++ +TC+ GL+ L+
Sbjct: 392 ILTNLANEANISTLLREFQTYVKSQDKQFAAATIQTIGRCATNILEVTDTCLNGLVCLL- 450
Query: 361 QELLTSDIESGNGEADVLIQSIISIKSIIKQDPSCHEKLFRS----LDSIKVPEARVMII 416
N + V+ +S++ IK +++ P+ H ++ + LDSI VP AR I+
Sbjct: 451 ----------SNRDEIVVAESVVVIKKLLQMQPAQHGEIIKHMAKLLDSITVPVARASIL 500
Query: 417 WMVGEYSSVGVKIPRMLTTVLKYLAWCFKSEAVETKLQILNTTIKVLLCAKGGDMWTITR 476
W++GE ++P++ VL+ +A F SE KLQILN K+ L T+
Sbjct: 501 WLIGENCE---RVPKIAPDVLRKMAKSFTSEDDLVKLQILNLGAKLYLTNSKQ-----TK 552
Query: 477 LFS-YLLELAECDLNYDVRDRARFFKKLFSHNLCSQVPEETNALQENKDLPLVLVECIFR 535
L + Y+L L + D NYD+RDR RF ++L N+ S + P L+E F+
Sbjct: 553 LLTQYILNLGKYDQNYDIRDRTRFIRQLIVPNVKSGALSKYAKKIFLAQKPAPLLESPFK 612
Query: 536 KQENLAASEPINDRFYLPGSLSQIVLHAAPGY 567
+ D F L G+LS + A GY
Sbjct: 613 DR----------DHFQL-GTLSHTLNIKATGY 633
>sp|Q556J8|AP3B_DICDI AP-3 complex subunit beta OS=Dictyostelium discoideum GN=ap3b-1
PE=3 SV=1
Length = 1108
Score = 243 bits (620), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 185/634 (29%), Positives = 301/634 (47%), Gaps = 124/634 (19%)
Query: 1 MAGIRLHVISPLVLVAVGKCARDPSVFVRKCAANALPKLHEL---RQEEITSAIEEIVGI 57
M+ IR+ I ++++A+ K +D S FVRK AA A+ K+H+L +QE + +E I
Sbjct: 118 MSSIRVIDIIEVIILAIEKSVKDTSPFVRKAAAFAIAKVHKLDCDKQEPLIDLLE----I 173
Query: 58 LLNDRSPGVVGAAAAAFASICPNNFTLIGRNYRNLCQILPDVEEWGQILLIEILLRYVVA 117
LLND S V+GAA AF +CP F L+ ++YR +CQ+L D +EW Q+++++IL +Y
Sbjct: 174 LLNDTSTMVLGAAIVAFNELCPQRFDLLHQHYRKICQLLADFDEWSQVIVLDILTKYA-- 231
Query: 118 SHGLVKESIMSSLLCIESSHSEKDVFDVNVALEDNGIPSRTYDSELVNLVSRSYIEGLGE 177
S C +S+ ++K++ + Y + +
Sbjct: 232 ---------RSQFRCPDSTMNDKNI------------------KQFKKKSKSFYSDEEDQ 264
Query: 178 YLTRSSDTNARSSDLNGARFTSGKTND-DVKLLLQCTSPLLWSHNSAVVLAAAGVHWIMS 236
++ + L F S + D D +LLL+ T PLL S N+AVV+A + +++ +
Sbjct: 265 EDDEPENSLYKKKPLERDMFDSSEEIDMDHRLLLKSTLPLLQSRNNAVVMAVSSLYFYCA 324
Query: 237 PKEDVKRIVKPLLFILRSSGASKYVVLCNIQVFAKALPHLFVPHYEDFFVSSSDSYQSKA 296
P + +++ K L+ ILRS +Y+ L NI P +F PH +FF+ SSD S
Sbjct: 325 PSIEAQKVGKSLVRILRSGPEVQYITLTNISTMVTLRPSMFEPHLSEFFIHSSDPEYSIK 384
Query: 297 LKLEILSSIVTESSISSVFKEFQDYIRDPDRRFAADTVAAIGLCARKLPKMANTCVEGLL 356
LKLEIL+ + T +I + KEF++Y+++ D++F A T+ AIG CA +P + +C+ GL+
Sbjct: 385 LKLEILTRLATPENIGKILKEFKEYVKNEDKKFVAATIQAIGSCASTVPDVTESCIYGLM 444
Query: 357 ALIRQELLTSDIESGNGEADVLIQSIISIKSI----------------------IKQDPS 394
+L+ N V+ +S+I +K + +K++ S
Sbjct: 445 SLL-----------SNQSTVVVAESVIVLKRLLQLNATNEKLEKLEKEKEKEKDVKENQS 493
Query: 395 CHEK----------------LFRSLDSIKVPEARVMIIWMVGEYSSVGVKIPRMLTTVLK 438
K L + LD+++VP AR I+W++GEY ++P + V +
Sbjct: 494 TISKHSSSNNSIKYDNIILHLSKLLDTLQVPSARASIVWVIGEYC---YRVPLVAPDVFR 550
Query: 439 YLAWCFKSEAVETKLQILNTTIKVLL------------------CAKGGDMWTITRLFSY 480
L F E KL+ LN K+ + IT +F Y
Sbjct: 551 KLVKSFSDEHESVKLETLNLGSKLYVQFTDNNSTTTTDNSIPNEFKNERTKEKITLMFQY 610
Query: 481 LLELAECDLNYDVRDRARFFKKLFSHNLCSQVPEETNALQENKDLPLVLVECIFRKQENL 540
+L LA+ D NYD+RD +R K + + E T ++ N ++ I Q+ +
Sbjct: 611 VLNLAKFDQNYDIRDNSRMLKHFYFNT------ENTQSINSN-------IKQIVINQKPI 657
Query: 541 AASEPIND---RFYLPGSLSQIVLHAAPGYEPLP 571
I++ RF L GSLS IV H A GY LP
Sbjct: 658 PTETSISEDRQRFTL-GSLSHIVNHTALGYTALP 690
Score = 42.4 bits (98), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 63/150 (42%), Gaps = 25/150 (16%)
Query: 718 IGRQVKAKSYTLLDPANGNGLKVYYSF----SSEASTISPQLVCLETFFENCSSETMSEV 773
I K+ LL P GL + Y F +E + P+ ++ +N S ET +++
Sbjct: 845 INSTTKSVKKILLKPTISGGLSIDYCFIRIRDNEEFSCQPRYNIIQLNIKNQSDETFTDI 904
Query: 774 TLVDEESHKALDLADLTLATTASSLTSQSDLPTLVPMEEITSLEPGQTMKRILEVRFHHH 833
+++++ +L +D+ P+E S+EP Q +++ + V F+
Sbjct: 905 SIINK------------------NLIDGADISEFDPIE---SIEPNQAIQKQIYVLFNST 943
Query: 834 LLPLKLALHCNGKKLPVKLRPDIGYFIKPV 863
K + N PV L P IG + P+
Sbjct: 944 SQSCKFEISFNKGNFPVTLTPIIGELLIPI 973
>sp|Q9Z1T1|AP3B1_MOUSE AP-3 complex subunit beta-1 OS=Mus musculus GN=Ap3b1 PE=1 SV=2
Length = 1105
Score = 210 bits (534), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 132/374 (35%), Positives = 207/374 (55%), Gaps = 47/374 (12%)
Query: 205 DVKLLLQCTSPLLWSHNSAVVLAAAGVHWIMSPKEDVKRIVKPLLFILRSSGASKYVVLC 264
D +LL++ T PLL S N+AVV+A A ++W +SPK + I K L+ +LRS+ +Y+VL
Sbjct: 297 DHRLLIRNTKPLLQSRNAAVVMAVAQLYWHISPKSEAGVISKSLVRLLRSNREVQYIVLQ 356
Query: 265 NIQVFAKALPHLFVPHYEDFFVSSSDSYQSKALKLEILSSIVTESSISSVFKEFQDYIRD 324
NI + +F P+ + F+V S+D K LKLEIL+++ E++IS++ +EFQ Y+R
Sbjct: 357 NIATMSIERKGMFEPYLKSFYVRSTDPTMIKTLKLEILTNLANEANISTLLREFQTYVRS 416
Query: 325 PDRRFAADTVAAIGLCARKLPKMANTCVEGLLALIRQELLTSDIESGNGEADVLIQSIIS 384
D++FAA T+ IG CA + ++ +TC+ GL+ L+ N + V+ +S++
Sbjct: 417 QDKQFAAATIQTIGRCATSISEVTDTCLNGLVCLL-----------SNRDEIVVAESVVV 465
Query: 385 IKSIIKQDPSCHEKLFRS----LDSIKVPEARVMIIWMVGEYSSVGVKIPRMLTTVLKYL 440
IK +++ P+ H ++ R LDSI VP AR I+W++GE ++P++ VL+ +
Sbjct: 466 IKKLLQMQPAQHGEIIRHMAKLLDSITVPVARASILWLIGENCE---RVPKIAPDVLRKM 522
Query: 441 AWCFKSEAVETKLQILNTTIKVLLCAKGGDMWTITRLFS-YLLELAECDLNYDVRDRARF 499
A F SE KLQILN K+ L T+L + Y+L L + D NYD+RDR RF
Sbjct: 523 AKSFTSEDDLVKLQILNLAAKLYLTNSKQ-----TKLLTQYILNLGKYDQNYDIRDRTRF 577
Query: 500 FKKLFSHNLCSQVPEETNALQENKD------LPLVLVECIFRKQENLAASEPINDRFYLP 553
++L N E++ AL + P L+E F+ + DRF L
Sbjct: 578 IRQLIVPN------EKSGALSKYAKKIFLAPKPAPLLESPFKDR----------DRFQL- 620
Query: 554 GSLSQIVLHAAPGY 567
G+LS + A GY
Sbjct: 621 GTLSHTLNIKASGY 634
Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 76/114 (66%), Gaps = 1/114 (0%)
Query: 1 MAGIRLHVISPLVLVAVGKCARDPSVFVRKCAANALPKLHELRQEEITSAIEEIVGILLN 60
++ IR+ +I P++++A+ + + D S +VRK AA+A+ KL+ L E+ IE ++ LL
Sbjct: 139 LSSIRVPIIVPVMMLAIKEASADLSPYVRKNAAHAIQKLYSLDPEQKEMLIE-VIEKLLK 197
Query: 61 DRSPGVVGAAAAAFASICPNNFTLIGRNYRNLCQILPDVEEWGQILLIEILLRY 114
D+S V G+ AF +CP+ LI RNYR LC +L DVEEWGQ+++I +L RY
Sbjct: 198 DKSTLVAGSVVMAFEEVCPDRIDLIHRNYRKLCNLLVDVEEWGQVVIIHMLTRY 251
Score = 33.5 bits (75), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 58/164 (35%), Gaps = 27/164 (16%)
Query: 722 VKAKSYTLLDPANGNGLKVYYSFSSEASTISPQLVCLETFFENCSSETMSEVTLVDEESH 781
V K++ LL +G GL +Y F + S ++V ++ N S + + +
Sbjct: 877 VPTKTHELLHRMHGKGLAAHYCFPRQPCIFSDKMVSVQITLTNTSDRKIENIHI------ 930
Query: 782 KALDLADLTLATTASSLTSQSDLPTLVPMEE---ITSLEPGQTMKRILEVRFHHHLLPLK 838
LP + M I SLEP ++ + + F
Sbjct: 931 ------------------GGKGLPVGMQMHAFHPIDSLEPKGSVTVSVGIDFCDSTQTAS 972
Query: 839 LALHCNGKKLPVKLRPDIGYFIKPVPMDMETFIEMESRLPGMFE 882
L V L+P +G + PV M + F + + L GM E
Sbjct: 973 FQLCTKDDCFNVTLQPPVGELLSPVAMSEKDFKKEQGTLTGMNE 1016
>sp|Q759E2|AP3B_ASHGO AP-3 complex subunit beta OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=APL6 PE=3 SV=2
Length = 781
Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 145/529 (27%), Positives = 228/529 (43%), Gaps = 91/529 (17%)
Query: 1 MAGIRLHVISPLVLVAVGKCARDPSVFVRKCAANALPKLHELRQEEITSAIEEIVGILLN 60
++ I + + P++L ++ K D S VR A L KL + + I + ++ LL
Sbjct: 142 LSDINIASLYPIILHSLKKTVIDSSEVVRCQVAMTLLKLFKEQGISIKDDVMPMLKSLLA 201
Query: 61 DRSPGVVGAAAAAFASICPNNFTLIGRNYRNLCQILPDVEEWGQILLIEILLRYVVASHG 120
D P VV AA F L+ +YR C IL + E Q ++I+I + Y
Sbjct: 202 DSEPSVVSAALLLFQKAFAQELQLLHGHYRRYCSILNQLTENAQAIMIDIFIAYA----- 256
Query: 121 LVKESIMSSLLCIESSHSEKDVFDVNVALED--NGIPSRTYDSELVNLVSRSYIEGLGEY 178
KE + ++ SS +E + L D N IP YD E
Sbjct: 257 --KEYLPRPMVRDTSSDAEA------IQLPDSFNQIPFPVYDVEY--------------- 293
Query: 179 LTRSSDTNARSSDLNGARFTSGKTNDDVKLLLQCTSPLLWSHNSAVVLAAAGVHWIMSPK 238
+ D+ L L LL S N+ V++A + + +S
Sbjct: 294 ------------------------DHDLNLFLSSLKKLLHSPNAMVIVAVSKAFYQLSSP 329
Query: 239 EDVKR--IVKPLLFILRSS---GASKYVVLCNIQVFAKALPHLFVPHYEDFFVSSSDSYQ 293
+ K IV LL + SS K +VL +I V+ + P LF HY+ FF+ SD+
Sbjct: 330 KTFKDSGIVDSLLRLTVSSYICSEIKELVLQSILVYCCSDPSLFRSHYKRFFLMPSDTEN 389
Query: 294 SKALKLEILSSIVTESSISSVFKEFQDYIRDPDRRFA--ADTVAAIGLCARKLPKMANTC 351
KL+ILS +V++S+ + E + ++ ++ + + + +CA+ K ++
Sbjct: 390 ISIFKLKILSILVSDSNCKHIVNELK-FVAGTEQSASILVEVSNTLSVCAQISSKWSSQI 448
Query: 352 VEGLLALIRQELLTSDIESGNGEAD--VLIQSIISIKSIIKQDPSCH----EKLFRSLDS 405
+ LL I S N D V I ++S+I++DP H KL + L +
Sbjct: 449 ISWLLDRI----------SSNTPIDKEVTASQINVLRSLIQKDPIKHIATVVKLSKMLSN 498
Query: 406 IK-VPEARVMIIWMVGEYSSVGVKIPRMLTTVLKYLAWCFKSEAVETKLQILNTTIKVL- 463
+P A+ IIW++GEY V PR+ VL+ L F E +LQILN K+L
Sbjct: 499 HDLLPSAKAPIIWLLGEYVQVE---PRICPDVLRRLLPQFSKEHAHVRLQILNLAAKLLS 555
Query: 464 --LCAKGGDMW------TITRLFSYLLELAECDLNYDVRDRARFFKKLF 504
+ + GDM I ++F L+LA+ D YDVRDRAR +F
Sbjct: 556 HDVDSYSGDMEYDIGTSRIGQMFEAALQLAKFDDEYDVRDRARMLASIF 604
>sp|O13939|AP3B_SCHPO AP-3 complex subunit beta OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=apl6 PE=1 SV=1
Length = 745
Score = 120 bits (302), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 187/398 (46%), Gaps = 43/398 (10%)
Query: 185 TNARSSDLNGARFTSGKTNDDVKLLLQCTSPLLWSHNSAVVLAAAGVHWIMSPKEDVKRI 244
T R + L ++ T+ D+K LL+ +S + ++A A + ++P + I
Sbjct: 238 TLVRYARLTLPEPSTPSTHSDLKELLESIKSCFFSLLPSTIIAGARAFYYLAPSNQMHLI 297
Query: 245 VKPLLFILRSSGASKYVVLCNIQVFAKALPHLFVPHYEDFFVSSSDSYQSKALKLEILSS 304
V+PLL +L + L I P LF H + FF+ +SDS + LK+ ILS
Sbjct: 298 VEPLLQLLLEKPIVRTTTLRYISQIVYKTPELFKNHIKSFFLIASDSDDTCLLKINILSR 357
Query: 305 IVTESSISSVFKEFQDYIRD-PDRRFAADTVAAIGLCARKLPKMANTCVEGLLALIRQEL 363
++ + S + E YI P+ A+ V A+G A MA +C+
Sbjct: 358 LLDAQNSSQILPELLYYINSHPNPSVASTAVKALGDFASANISMAPSCLN---------- 407
Query: 364 LTSDIESGNGEADVLIQSIISIKSIIKQDPS--CHEKLFRSLDSIKVPEARVMIIWMVGE 421
T + + + ++ ++ S++ +I DP + L + ++++VP A+ + +W++ E
Sbjct: 408 -TLLLLLKSHNSLIVTEAASSLRLLIHNDPKEIYLQYLAATYETLEVPRAKSVTLWLISE 466
Query: 422 YSSVGVKIPRMLTTVLKYLAWCFKSEAVETKLQILNTTIKVLLCA----KGGDMWT---- 473
+ + IPR++ VL+ F E +E K QIL ++++ + + K D+ +
Sbjct: 467 HILI---IPRLVPDVLRIAVKTFADETLEVKYQILELSVRLYVLSHSEEKQNDLESRDDV 523
Query: 474 ITRLFSYLLELAECDLNYDVRDRARFFKKLFSHNLCSQVPEETNALQENKDLPLVLVECI 533
++ LF+Y+L L D++YD+RDRARF+K+L S P + +++E
Sbjct: 524 VSLLFNYVLSLIHFDMSYDLRDRARFYKELAS------TPSSEFTRR-------IVLESK 570
Query: 534 FRKQENLAASEPINDRFYLPGSLSQIVLHAAPGYEPLP 571
Q+ + AS R Y G+ S + GYEP+P
Sbjct: 571 GNSQKEIIAS-----RDYCIGTASLCLNEDVMGYEPIP 603
Score = 77.4 bits (189), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 65/114 (57%), Gaps = 1/114 (0%)
Query: 1 MAGIRLHVISPLVLVAVGKCARDPSVFVRKCAANALPKLHELRQEEITSAIEEIVGILLN 60
M+ IR+ I+ +VL+A+ +C D + VR+ AA A+ K + L S +EE + LL+
Sbjct: 130 MSSIRVPAINGIVLLAIQQCITDTADRVRQSAALAITKCYSL-DPSYKSQLEEHIKTLLS 188
Query: 61 DRSPGVVGAAAAAFASICPNNFTLIGRNYRNLCQILPDVEEWGQILLIEILLRY 114
D SP VV AA F +CP +I Y +C + P + +W +++ ++ L+RY
Sbjct: 189 DNSPIVVPAALFTFEVVCPEKLEIIHPYYHRICTLFPQMNDWDKVVALKTLVRY 242
>sp|P52303|AP1B1_RAT AP-1 complex subunit beta-1 OS=Rattus norvegicus GN=Ap1b1 PE=1 SV=1
Length = 949
Score = 117 bits (292), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 128/501 (25%), Positives = 219/501 (43%), Gaps = 76/501 (15%)
Query: 19 KCARDPSVFVRKCAANALPKLHELRQEEITSAIEEIVGILLNDRSPGVVGAAAAAFASIC 78
K DP+ +R A + +R ++IT + E + L D P V AA A +
Sbjct: 93 KDCEDPNPLIRALAVRTM---GCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLH 149
Query: 79 PNNFTLIGRNYRNLCQILPDVEEWGQILLIEILLRYVVASHGLVKESIMSSLLCIESSHS 138
N L VE+ G ++ L + S+ +V + +++L I SH
Sbjct: 150 DINAQL--------------VEDQG---FLDTLKDLISDSNPMVVANRVAALSEIAESHP 192
Query: 139 EKDVFDVNVALEDNGIPSRTYDSELVNLVSRSYIEGLGEYLTRSSDTNARSSDLNGARFT 198
++ D+ + + + +E + ++ LG Y+ + D A+S
Sbjct: 193 SSNLLDLKAQSINKLLTALNECTEWAQIF---ILDCLGNYMPKD-DREAQS--------- 239
Query: 199 SGKTNDDVKLLLQCTSPLLWSHNSAVVLAAAGVHW----IMSPKED-----VKRIVKPLL 249
+ + +P L NSAVVL+A V ++S D +K++ PL+
Sbjct: 240 ----------ICERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDLDYYATLLKKLAPPLV 289
Query: 250 FILRSSGASKYVVLCNIQVFAKALPHLFVPHYEDFFVSSSDSYQSKALKLEILSSIVTES 309
+L + +YV L NI + + P + + FFV +D K KL+I+ + +++
Sbjct: 290 TLLSAEPEPQYVPLRNINLIVQKRPEILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQA 349
Query: 310 SISSVFKEFQDYIRDPDRRFAADTVAAIGLCARKLPKMANTCVEGLLALIRQELLTSDIE 369
+I+ V E ++Y + D F V AIG CA K+ + A CV LL LI+ ++
Sbjct: 350 NIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKV------ 403
Query: 370 SGNGEADVLIQSIISIKSIIKQDPSCHEK----LFRSLDSIKVPEARVMIIWMVGEYSSV 425
V+ ++I+ IK I ++ P+ +E L +LDS+ PEAR +IW+VGEY+
Sbjct: 404 -----NYVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAER 458
Query: 426 GVKIPRMLTTVLKYLAWCFKSEAVETKLQILNTTIKVLLCAKGGDMWTITRLFSYLLELA 485
+L + L F E+ + +LQ+L +K+ L L +L LA
Sbjct: 459 IDNADELLESFLD----GFHDESTQVQLQLLTAIVKLFLKKPT----ETQELVQQVLSLA 510
Query: 486 ECDL-NYDVRDRARFFKKLFS 505
D N D+RDR + +L S
Sbjct: 511 TQDSDNPDLRDRGYIYWRLLS 531
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 6/121 (4%)
Query: 1 MAGIRLHVISPLVLVAVGKCARDPSVFVRKCAANALPKLHELRQEEIT-SAIEEIVGILL 59
M IR+ I+ + + KC +D +VRK AA + KLH++ + + + + L+
Sbjct: 110 MGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQGFLDTLKDLI 169
Query: 60 NDRSPGVVGAAAAAFASIC-----PNNFTLIGRNYRNLCQILPDVEEWGQILLIEILLRY 114
+D +P VV AA + I N L ++ L L + EW QI +++ L Y
Sbjct: 170 SDSNPMVVANRVAALSEIAESHPSSNLLDLKAQSINKLLTALNECTEWAQIFILDCLGNY 229
Query: 115 V 115
+
Sbjct: 230 M 230
>sp|Q10567|AP1B1_HUMAN AP-1 complex subunit beta-1 OS=Homo sapiens GN=AP1B1 PE=1 SV=2
Length = 949
Score = 116 bits (291), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 128/503 (25%), Positives = 221/503 (43%), Gaps = 76/503 (15%)
Query: 19 KCARDPSVFVRKCAANALPKLHELRQEEITSAIEEIVGILLNDRSPGVVGAAAAAFASIC 78
K DP+ +R A + +R ++IT + E + L D P V AA A +
Sbjct: 93 KDCEDPNPLIRALAVRTM---GCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLH 149
Query: 79 PNNFTLIGRNYRNLCQILPDVEEWGQILLIEILLRYVVASHGLVKESIMSSLLCIESSHS 138
N L VE+ G ++ L + S+ +V + +++L I SH
Sbjct: 150 DINAQL--------------VEDQG---FLDTLKDLISDSNPMVVANAVAALSEIAESHP 192
Query: 139 EKDVFDVNVALEDNGIPSRTYDSELVNLVSRSYIEGLGEYLTRSSDTNARSSDLNGARFT 198
++ D+N + + + +E + ++ L Y+ + D A+S
Sbjct: 193 SSNLLDLNPQSINKLLTALNECTEWGQIF---ILDCLANYMPKD-DREAQS--------- 239
Query: 199 SGKTNDDVKLLLQCTSPLLWSHNSAVVLAAAGVHW----IMSPKED-----VKRIVKPLL 249
+ + +P L NSAVVL+A V ++S D +K++ PL+
Sbjct: 240 ----------ICERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDLDYYGTLLKKLAPPLV 289
Query: 250 FILRSSGASKYVVLCNIQVFAKALPHLFVPHYEDFFVSSSDSYQSKALKLEILSSIVTES 309
+L + +YV L NI + + P + + FFV +D K KL+I+ + +++
Sbjct: 290 TLLSAEPELQYVALRNINLIVQKRPEILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQA 349
Query: 310 SISSVFKEFQDYIRDPDRRFAADTVAAIGLCARKLPKMANTCVEGLLALIRQELLTSDIE 369
+I+ V E ++Y + D F V AIG CA K+ + A CV LL LI+ ++
Sbjct: 350 NIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKV------ 403
Query: 370 SGNGEADVLIQSIISIKSIIKQDPSCHEK----LFRSLDSIKVPEARVMIIWMVGEYSSV 425
V+ ++I+ IK I ++ P+ +E L +LDS+ PEAR +IW+VGEY+
Sbjct: 404 -----NYVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAER 458
Query: 426 GVKIPRMLTTVLKYLAWCFKSEAVETKLQILNTTIKVLLCAKGGDMWTITRLFSYLLELA 485
+L + L+ F E+ + +LQ+L +K+ L L +L LA
Sbjct: 459 IDNADELLESFLE----GFHDESTQVQLQLLTAIVKLFLKKPT----ETQELVQQVLSLA 510
Query: 486 ECDL-NYDVRDRARFFKKLFSHN 507
D N D+RDR + +L S +
Sbjct: 511 TQDSDNPDLRDRGYIYWRLLSTD 533
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 6/121 (4%)
Query: 1 MAGIRLHVISPLVLVAVGKCARDPSVFVRKCAANALPKLHELRQEEIT-SAIEEIVGILL 59
M IR+ I+ + + KC +D +VRK AA + KLH++ + + + + L+
Sbjct: 110 MGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQGFLDTLKDLI 169
Query: 60 NDRSPGVVGAAAAAFASIC-----PNNFTLIGRNYRNLCQILPDVEEWGQILLIEILLRY 114
+D +P VV A AA + I N L ++ L L + EWGQI +++ L Y
Sbjct: 170 SDSNPMVVANAVAALSEIAESHPSSNLLDLNPQSINKLLTALNECTEWGQIFILDCLANY 229
Query: 115 V 115
+
Sbjct: 230 M 230
>sp|O35643|AP1B1_MOUSE AP-1 complex subunit beta-1 OS=Mus musculus GN=Ap1b1 PE=1 SV=2
Length = 943
Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 156/319 (48%), Gaps = 33/319 (10%)
Query: 201 KTNDDVKLLLQCTSPLLWSHNSAVVLAAAGVHW----IMSPKED-----VKRIVKPLLFI 251
K + + + + + +P L NSAVVL+A V ++S D +K++ PL+ +
Sbjct: 232 KDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDLDYYATLLKKLAPPLVTL 291
Query: 252 LRSSGASKYVVLCNIQVFAKALPHLFVPHYEDFFVSSSDSYQSKALKLEILSSIVTESSI 311
L + +YV L NI + + P + + FFV +D K KL+I+ + ++++I
Sbjct: 292 LSAEPELQYVALRNINLIVQKRPEILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANI 351
Query: 312 SSVFKEFQDYIRDPDRRFAADTVAAIGLCARKLPKMANTCVEGLLALIRQELLTSDIESG 371
+ V E ++Y + D F V AIG CA K+ + A CV LL LI+ ++
Sbjct: 352 AQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKV-------- 403
Query: 372 NGEADVLIQSIISIKSIIKQDPSCHEK----LFRSLDSIKVPEARVMIIWMVGEYSSVGV 427
V+ ++I+ IK I ++ P+ +E L +LDS+ PEAR +IW+VGEY+
Sbjct: 404 ---NYVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERID 460
Query: 428 KIPRMLTTVLKYLAWCFKSEAVETKLQILNTTIKVLLCAKGGDMWTITRLFSYLLELAEC 487
+L + L+ F E+ + +LQ+L +K+ L L +L LA
Sbjct: 461 NADELLESFLE----GFHDESTQVQLQLLTAIVKLFLKKPT----ETQELVQQVLSLATQ 512
Query: 488 DL-NYDVRDRARFFKKLFS 505
D N D+RDR + +L S
Sbjct: 513 DSDNPDLRDRGYIYWRLLS 531
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 6/121 (4%)
Query: 1 MAGIRLHVISPLVLVAVGKCARDPSVFVRKCAANALPKLHELRQEEIT-SAIEEIVGILL 59
M IR+ I+ + + KC +D +VRK AA + KLH++ + + + + L+
Sbjct: 110 MGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQGFLDTLKDLI 169
Query: 60 NDRSPGVVGAAAAAFASIC-----PNNFTLIGRNYRNLCQILPDVEEWGQILLIEILLRY 114
+D +P VV A AA + I N L ++ L L + EWGQI +++ L Y
Sbjct: 170 SDSNPMVVANAVAALSEIAESHPSSNLLDLNPQSINKLLTALNECTEWGQIFILDCLANY 229
Query: 115 V 115
+
Sbjct: 230 M 230
>sp|O81742|APBLC_ARATH Beta-adaptin-like protein C OS=Arabidopsis thaliana GN=BETAC-AD
PE=1 SV=2
Length = 893
Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 152/314 (48%), Gaps = 35/314 (11%)
Query: 209 LLQCTSPLLWSHNSAVVLAAAGVHWIMSPKE-----DV-----KRIVKPLLFILRSSGAS 258
+++ +P L N AVVL+A V I+ E DV K++ PL+ +L +
Sbjct: 241 IVERVTPRLQHANCAVVLSA--VKMILQQMELITSTDVIRNLCKKMAPPLVTLLSAEPEI 298
Query: 259 KYVVLCNIQVFAKALPHLFVPHYEDFFVSSSDSYQSKALKLEILSSIVTESSISSVFKEF 318
+YV L NI + + P + + FF +D K KLEI+ + ++ +I V EF
Sbjct: 299 QYVALRNINLIVQKRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEF 358
Query: 319 QDYIRDPDRRFAADTVAAIGLCARKLPKMANTCVEGLLALIRQELLTSDIESGNGEADVL 378
++Y + D F V AIG CA KL + A C+ LL LI+ ++ V+
Sbjct: 359 KEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKV-----------NYVV 407
Query: 379 IQSIISIKSIIKQDPSCHEKLF----RSLDSIKVPEARVMIIWMVGEYSSVGVKIPRMLT 434
++II IK I ++ P+ +E + SLD++ PEA+ +IW++GEY+ +L
Sbjct: 408 QEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNADELLE 467
Query: 435 TVLKYLAWCFKSEAVETKLQILNTTIKVLLCAKG-GDMWTITRLFSYLLELAECDLNYDV 493
+ L+ F E + +LQ+L T+K+ L G I + + E D N D+
Sbjct: 468 SFLE----NFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNN--ATVETD-NPDL 520
Query: 494 RDRARFFKKLFSHN 507
RDRA + +L S +
Sbjct: 521 RDRAYIYWRLLSTD 534
Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 5/119 (4%)
Query: 1 MAGIRLHVISPLVLVAVGKCARDPSVFVRKCAANALPKLHELRQEEITS-AIEEIVGILL 59
M IR+ I+ + + KC +D +VRK AA + KL ++ E + E + L+
Sbjct: 112 MGCIRVDKITEYLCDPLQKCLKDDDPYVRKTAAICVAKLFDINAELVEDRGFLEALKDLI 171
Query: 60 NDRSPGVVGAAAAAFASICPNN----FTLIGRNYRNLCQILPDVEEWGQILLIEILLRY 114
+D +P VV A AA A I N+ F + L L + EWGQ+ +++ L RY
Sbjct: 172 SDNNPMVVANAVAALAEIQENSTSPIFEINSTILTKLLTALNECTEWGQVFILDALSRY 230
>sp|Q9SUS3|APBLB_ARATH Beta-adaptin-like protein B OS=Arabidopsis thaliana GN=BETAB-AD
PE=1 SV=1
Length = 894
Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 152/314 (48%), Gaps = 35/314 (11%)
Query: 209 LLQCTSPLLWSHNSAVVLAAAGVHWIMSPKE-----DV-----KRIVKPLLFILRSSGAS 258
+++ +P L N AVVL+A V I+ E DV K++ PL+ +L +
Sbjct: 241 IVERVTPRLQHANCAVVLSA--VKMILQQMELITSTDVIRNLCKKMAPPLVTLLSAEPEI 298
Query: 259 KYVVLCNIQVFAKALPHLFVPHYEDFFVSSSDSYQSKALKLEILSSIVTESSISSVFKEF 318
+YV L NI + + P + + FF +D K KLEI+ + ++ +I V EF
Sbjct: 299 QYVALRNINLIVQKRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEF 358
Query: 319 QDYIRDPDRRFAADTVAAIGLCARKLPKMANTCVEGLLALIRQELLTSDIESGNGEADVL 378
++Y + D F V AIG CA KL + A C+ LL LI+ ++ V+
Sbjct: 359 KEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKV-----------NYVV 407
Query: 379 IQSIISIKSIIKQDPSCHEKLF----RSLDSIKVPEARVMIIWMVGEYSSVGVKIPRMLT 434
++II IK I ++ P+ +E + SLD++ PEA+ +IW++GEY+ +L
Sbjct: 408 QEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNADELLE 467
Query: 435 TVLKYLAWCFKSEAVETKLQILNTTIKVLLCAKG-GDMWTITRLFSYLLELAECDLNYDV 493
+ L+ F E + +LQ+L T+K+ L G I + + E D N D+
Sbjct: 468 SFLE----NFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNN--ATVETD-NPDL 520
Query: 494 RDRARFFKKLFSHN 507
RDRA + +L S +
Sbjct: 521 RDRAYIYWRLLSTD 534
Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 5/122 (4%)
Query: 1 MAGIRLHVISPLVLVAVGKCARDPSVFVRKCAANALPKLHELRQEEITS-AIEEIVGILL 59
M IR+ I+ + + KC +D +VRK AA + KL ++ E + E + L+
Sbjct: 112 MGCIRVDKITEYLCDPLQKCLKDDDPYVRKTAAICVAKLFDINAELVEDRGFLEALKDLI 171
Query: 60 NDRSPGVVGAAAAAFASICPNN----FTLIGRNYRNLCQILPDVEEWGQILLIEILLRYV 115
+D +P VV A AA A I N+ F + L L + EWGQ+ +++ L +Y
Sbjct: 172 SDNNPMVVANAVAALAEIQENSSSPIFEINSTTLTKLLTALNECTEWGQVFILDALSKYK 231
Query: 116 VA 117
A
Sbjct: 232 AA 233
>sp|P63009|AP2B1_BOVIN AP-2 complex subunit beta OS=Bos taurus GN=AP2B1 PE=1 SV=2
Length = 937
Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 154/319 (48%), Gaps = 33/319 (10%)
Query: 201 KTNDDVKLLLQCTSPLLWSHNSAVVLAAAGV---HWIMSPKED------VKRIVKPLLFI 251
K + + + + + +P L NSAVVL+A V + PKE +K++ PL+ +
Sbjct: 232 KDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKESDYYNMLLKKLAPPLVTL 291
Query: 252 LRSSGASKYVVLCNIQVFAKALPHLFVPHYEDFFVSSSDSYQSKALKLEILSSIVTESSI 311
L +YV L NI + + P + + FFV +D K KL+I+ + ++++I
Sbjct: 292 LSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIRLASQANI 351
Query: 312 SSVFKEFQDYIRDPDRRFAADTVAAIGLCARKLPKMANTCVEGLLALIRQELLTSDIESG 371
+ V E ++Y + D F V AIG CA K+ + A CV LL LI+ ++
Sbjct: 352 AQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKV-------- 403
Query: 372 NGEADVLIQSIISIKSIIKQDPSCHEKLF----RSLDSIKVPEARVMIIWMVGEYSSVGV 427
V+ ++I+ I+ I ++ P+ +E + +LDS+ P+AR +IW+VGEY+
Sbjct: 404 ---NYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERID 460
Query: 428 KIPRMLTTVLKYLAWCFKSEAVETKLQILNTTIKVLLCAKGGDMWTITRLFSYLLELAEC 487
+L + L+ F E+ + +L +L +K+ L L +L LA
Sbjct: 461 NADELLESFLE----GFHDESTQVQLTLLTAIVKLFLKKPS----ETQELVQQVLSLATQ 512
Query: 488 DL-NYDVRDRARFFKKLFS 505
D N D+RDR + +L S
Sbjct: 513 DSDNPDLRDRGYIYWRLLS 531
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 6/120 (5%)
Query: 1 MAGIRLHVISPLVLVAVGKCARDPSVFVRKCAANALPKLHELRQEEIT-SAIEEIVGILL 59
M IR+ I+ + + KC +D +VRK AA + KLH++ + + + + L+
Sbjct: 110 MGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLI 169
Query: 60 NDRSPGVVGAAAAAFASIC---PNN--FTLIGRNYRNLCQILPDVEEWGQILLIEILLRY 114
D +P VV A AA + I PN+ L +N L L + EWGQI +++ L Y
Sbjct: 170 ADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNY 229
>sp|Q08DS7|AP1B1_BOVIN AP-1 complex subunit beta-1 OS=Bos taurus GN=AP2B1 PE=2 SV=1
Length = 951
Score = 114 bits (284), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 155/318 (48%), Gaps = 31/318 (9%)
Query: 201 KTNDDVKLLLQCTSPLLWSHNSAVVLAAAGV---HWIMSPKED------VKRIVKPLLFI 251
K + + + + + +P L NSAVVL+A V + PKE +K++ PL+ +
Sbjct: 232 KDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKESDYYNMLLKKLAPPLVTL 291
Query: 252 LRSSGASKYVVLCNIQVFAKALPHLFVPHYEDFFVSSSDSYQSKALKLEILSSIVTESSI 311
L +YV L NI + + P + + FFV +D K KL+I+ + ++++I
Sbjct: 292 LSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIRLASQANI 351
Query: 312 SSVFKEFQDYIRDPDRRFAADTVAAIGLCARKLPKMANTCVEGLLALIRQELLTSDIESG 371
+ V E ++Y + D F V AIG CA K+ + A CV LL LI+ ++
Sbjct: 352 AQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKV-------- 403
Query: 372 NGEADVLIQSIISIKSIIKQDPSCHEKLF----RSLDSIKVPEARVMIIWMVGEYSSVGV 427
V+ ++I+ I+ I ++ P+ +E + +LDS+ P+AR +IW+VGEY+
Sbjct: 404 ---NYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERID 460
Query: 428 KIPRMLTTVLKYLAWCFKSEAVETKLQILNTTIKVLLCAKGGDMWTITRLFSYLLELAEC 487
+L + L+ F E+ + +L +L +K+ L + ++ S L +
Sbjct: 461 NADELLESFLE----GFHDESTQVQLTLLTAIVKLFLKKPSETQELVQQVLS--LATQDS 514
Query: 488 DLNYDVRDRARFFKKLFS 505
D N D+RDR + +L S
Sbjct: 515 D-NPDLRDRGYIYWRLLS 531
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 6/120 (5%)
Query: 1 MAGIRLHVISPLVLVAVGKCARDPSVFVRKCAANALPKLHELRQEEIT-SAIEEIVGILL 59
M IR+ I+ + + KC +D +VRK AA + KLH++ + + + + L+
Sbjct: 110 MGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLI 169
Query: 60 NDRSPGVVGAAAAAFASIC---PNN--FTLIGRNYRNLCQILPDVEEWGQILLIEILLRY 114
D +P VV A AA + I PN+ L +N L L + EWGQI +++ L Y
Sbjct: 170 ADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNY 229
>sp|P62944|AP2B1_RAT AP-2 complex subunit beta OS=Rattus norvegicus GN=Ap2b1 PE=1 SV=1
Length = 937
Score = 113 bits (282), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 154/319 (48%), Gaps = 33/319 (10%)
Query: 201 KTNDDVKLLLQCTSPLLWSHNSAVVLAAAGV---HWIMSPKED------VKRIVKPLLFI 251
K + + + + + +P L NSAVVL+A V + PK+ +K++ PL+ +
Sbjct: 232 KDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTL 291
Query: 252 LRSSGASKYVVLCNIQVFAKALPHLFVPHYEDFFVSSSDSYQSKALKLEILSSIVTESSI 311
L +YV L NI + + P + + FFV +D K KL+I+ + ++++I
Sbjct: 292 LSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIRLASQANI 351
Query: 312 SSVFKEFQDYIRDPDRRFAADTVAAIGLCARKLPKMANTCVEGLLALIRQELLTSDIESG 371
+ V E ++Y + D F V AIG CA K+ + A CV LL LI+ ++
Sbjct: 352 AQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKV-------- 403
Query: 372 NGEADVLIQSIISIKSIIKQDPSCHEKLF----RSLDSIKVPEARVMIIWMVGEYSSVGV 427
V+ ++I+ I+ I ++ P+ +E + +LDS+ P+AR +IW+VGEY+
Sbjct: 404 ---NYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERID 460
Query: 428 KIPRMLTTVLKYLAWCFKSEAVETKLQILNTTIKVLLCAKGGDMWTITRLFSYLLELAEC 487
+L + L+ F E+ + +L +L +K+ L L +L LA
Sbjct: 461 NADELLESFLE----GFHDESTQVQLTLLTAIVKLFLKKPS----ETQELVQQVLSLATQ 512
Query: 488 DL-NYDVRDRARFFKKLFS 505
D N D+RDR + +L S
Sbjct: 513 DSDNPDLRDRGYIYWRLLS 531
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 6/120 (5%)
Query: 1 MAGIRLHVISPLVLVAVGKCARDPSVFVRKCAANALPKLHELRQEEIT-SAIEEIVGILL 59
M IR+ I+ + + KC +D +VRK AA + KLH++ + + + + L+
Sbjct: 110 MGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLI 169
Query: 60 NDRSPGVVGAAAAAFASIC---PNN--FTLIGRNYRNLCQILPDVEEWGQILLIEILLRY 114
D +P VV A AA + I PN+ L +N L L + EWGQI +++ L Y
Sbjct: 170 ADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNY 229
>sp|P63010|AP2B1_HUMAN AP-2 complex subunit beta OS=Homo sapiens GN=AP2B1 PE=1 SV=1
Length = 937
Score = 113 bits (282), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 154/319 (48%), Gaps = 33/319 (10%)
Query: 201 KTNDDVKLLLQCTSPLLWSHNSAVVLAAAGV---HWIMSPKED------VKRIVKPLLFI 251
K + + + + + +P L NSAVVL+A V + PK+ +K++ PL+ +
Sbjct: 232 KDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTL 291
Query: 252 LRSSGASKYVVLCNIQVFAKALPHLFVPHYEDFFVSSSDSYQSKALKLEILSSIVTESSI 311
L +YV L NI + + P + + FFV +D K KL+I+ + ++++I
Sbjct: 292 LSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIRLASQANI 351
Query: 312 SSVFKEFQDYIRDPDRRFAADTVAAIGLCARKLPKMANTCVEGLLALIRQELLTSDIESG 371
+ V E ++Y + D F V AIG CA K+ + A CV LL LI+ ++
Sbjct: 352 AQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKV-------- 403
Query: 372 NGEADVLIQSIISIKSIIKQDPSCHEKLF----RSLDSIKVPEARVMIIWMVGEYSSVGV 427
V+ ++I+ I+ I ++ P+ +E + +LDS+ P+AR +IW+VGEY+
Sbjct: 404 ---NYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERID 460
Query: 428 KIPRMLTTVLKYLAWCFKSEAVETKLQILNTTIKVLLCAKGGDMWTITRLFSYLLELAEC 487
+L + L+ F E+ + +L +L +K+ L L +L LA
Sbjct: 461 NADELLESFLE----GFHDESTQVQLTLLTAIVKLFLKKPS----ETQELVQQVLSLATQ 512
Query: 488 DL-NYDVRDRARFFKKLFS 505
D N D+RDR + +L S
Sbjct: 513 DSDNPDLRDRGYIYWRLLS 531
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 6/120 (5%)
Query: 1 MAGIRLHVISPLVLVAVGKCARDPSVFVRKCAANALPKLHELRQEEIT-SAIEEIVGILL 59
M IR+ I+ + + KC +D +VRK AA + KLH++ + + + + L+
Sbjct: 110 MGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLI 169
Query: 60 NDRSPGVVGAAAAAFASIC---PNN--FTLIGRNYRNLCQILPDVEEWGQILLIEILLRY 114
D +P VV A AA + I PN+ L +N L L + EWGQI +++ L Y
Sbjct: 170 ADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNY 229
>sp|Q9DBG3|AP2B1_MOUSE AP-2 complex subunit beta OS=Mus musculus GN=Ap2b1 PE=1 SV=1
Length = 937
Score = 113 bits (282), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 154/319 (48%), Gaps = 33/319 (10%)
Query: 201 KTNDDVKLLLQCTSPLLWSHNSAVVLAAAGV---HWIMSPKED------VKRIVKPLLFI 251
K + + + + + +P L NSAVVL+A V + PK+ +K++ PL+ +
Sbjct: 232 KDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTL 291
Query: 252 LRSSGASKYVVLCNIQVFAKALPHLFVPHYEDFFVSSSDSYQSKALKLEILSSIVTESSI 311
L +YV L NI + + P + + FFV +D K KL+I+ + ++++I
Sbjct: 292 LSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIRLASQANI 351
Query: 312 SSVFKEFQDYIRDPDRRFAADTVAAIGLCARKLPKMANTCVEGLLALIRQELLTSDIESG 371
+ V E ++Y + D F V AIG CA K+ + A CV LL LI+ ++
Sbjct: 352 AQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKV-------- 403
Query: 372 NGEADVLIQSIISIKSIIKQDPSCHEKLF----RSLDSIKVPEARVMIIWMVGEYSSVGV 427
V+ ++I+ I+ I ++ P+ +E + +LDS+ P+AR +IW+VGEY+
Sbjct: 404 ---NYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERID 460
Query: 428 KIPRMLTTVLKYLAWCFKSEAVETKLQILNTTIKVLLCAKGGDMWTITRLFSYLLELAEC 487
+L + L+ F E+ + +L +L +K+ L L +L LA
Sbjct: 461 NADELLESFLE----GFHDESTQVQLTLLTAIVKLFLKKPS----ETQELVQQVLSLATQ 512
Query: 488 DL-NYDVRDRARFFKKLFS 505
D N D+RDR + +L S
Sbjct: 513 DSDNPDLRDRGYIYWRLLS 531
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 6/120 (5%)
Query: 1 MAGIRLHVISPLVLVAVGKCARDPSVFVRKCAANALPKLHELRQEEIT-SAIEEIVGILL 59
M IR+ I+ + + KC +D +VRK AA + KLH++ + + + + L+
Sbjct: 110 MGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLI 169
Query: 60 NDRSPGVVGAAAAAFASIC---PNN--FTLIGRNYRNLCQILPDVEEWGQILLIEILLRY 114
D +P VV A AA + I PN+ L +N L L + EWGQI +++ L Y
Sbjct: 170 ADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNY 229
>sp|Q54X82|AP1B_DICDI AP-1 complex subunit beta OS=Dictyostelium discoideum GN=ap1b1 PE=3
SV=1
Length = 942
Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 148/305 (48%), Gaps = 30/305 (9%)
Query: 213 TSPLLWSHNSAVVLAAAGV--HWIMS-PKEDV-----KRIVKPLLFILRSSGASKYVVLC 264
+P L NSAVVL+A V ++ S DV K++ PL+ +L +++ L
Sbjct: 243 VAPRLQHANSAVVLSAVKVLMKYMNSIGNNDVIRLFCKKMAPPLVTLLSKEPEIQFLGLR 302
Query: 265 NIQVFAKALPHLFVPHYEDFFVSSSDSYQSKALKLEILSSIVTESSISSVFKEFQDYIRD 324
NI + + P + + FF +D K KLEI+ + E +I V EF++Y +
Sbjct: 303 NINLIVQKRPEILQYEMKVFFCKYNDPIYVKMEKLEIMIMLANEKNIEEVLLEFKEYATE 362
Query: 325 PDRRFAADTVAAIGLCARKLPKMANTCVEGLLALIRQELLTSDIESGNGEADVLIQSIIS 384
D F V AIG CA K+ + + C++ LL LI+ ++ V+ ++II
Sbjct: 363 IDVEFVRKAVRAIGRCAIKIDRASERCIQVLLDLIQTKV-----------NYVVQEAIIV 411
Query: 385 IKSIIKQDPSCHEKLFRS----LDSIKVPEARVMIIWMVGEYSSVGVKIPRMLTTVLKYL 440
IK I ++ P+ +E + + L+S+ PEA+ +IW++GEY+ +L + L+
Sbjct: 412 IKDIFRKYPNKYEGIIATLCANLESLDEPEAKASMIWIIGEYAERIDNAHELLNSFLE-- 469
Query: 441 AWCFKSEAVETKLQILNTTIKVLLCAKGGDMWTITRLFSYLLELAECDLNYDVRDRARFF 500
FK E + +LQ+L + +K+ L + + + L E D N D+RDR +
Sbjct: 470 --GFKDENSQVQLQLLTSIVKLFLKRPKDAQQMVQTVLN--LSTQESD-NPDLRDRGFVY 524
Query: 501 KKLFS 505
+L S
Sbjct: 525 WRLLS 529
Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 53/119 (44%), Gaps = 5/119 (4%)
Query: 1 MAGIRLHVISPLVLVAVGKCARDPSVFVRKCAANALPKLHELRQEEI-TSAIEEIVGILL 59
M IR+ I+ + + +D +VRK AA + KL+++ E + I+ LL
Sbjct: 110 MGCIRVDNITEHLCEPLRHALKDQDPYVRKTAAVCVAKLYDVNPELVENQGFLNILNDLL 169
Query: 60 NDRSPGVVGAAAAAFASI----CPNNFTLIGRNYRNLCQILPDVEEWGQILLIEILLRY 114
D +P VV A A+ I F + N L L + EWGQ+ ++ L +Y
Sbjct: 170 GDSNPMVVANAVASLTEIDEVSKKEVFRIHSGNLNKLLAALNECTEWGQVFILNSLCKY 228
>sp|O43005|AP2B_SCHPO AP-2 complex subunit beta OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=apl1 PE=3 SV=1
Length = 677
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 146/307 (47%), Gaps = 31/307 (10%)
Query: 214 SPLLWSHNSAVVLAAAGVHWIMSP--------KEDVKRIVKPLLFIL-RSSGASKYVVLC 264
SP L N+AV + A V ++ KE + PL+ +L R S A++YV+L
Sbjct: 245 SPWLQHGNAAVCMGAVKVILYLTNYMKDDNRVKEYFMKTQPPLVTLLARKSSATQYVILR 304
Query: 265 NIQVFAKALPHLFVPHYEDFFVSSSDSYQSKALKLEILSSIVTESSISSVFKEFQDYIRD 324
NIQ+ + P +F F+ + D K KL+IL+ I ++ + EF +Y +
Sbjct: 305 NIQIILEQCPEMFANDIHFFYCNFDDPIYVKLEKLDILTKIADIHNLDQILPEFVEYASE 364
Query: 325 PDRRFAADTVAAIGLCARKLPKMANTCVEGLLALIRQELLTSDIESGNGEADVLIQSIIS 384
D +V IG A K+ + N C++ L+ L+ ++ V+ +++I
Sbjct: 365 IDVELVRKSVKCIGYLAIKIEERKNDCIDSLIELMNTKVTY-----------VIQEAVIV 413
Query: 385 IKSIIKQDPSCHEK----LFRSLDSIKVPEARVMIIWMVGEYSSVGVKIPRMLTTVLKYL 440
I+ I+++ P ++ L+ +LDS+ P+A+ +IW++G+Y+ +I +T + YL
Sbjct: 414 IRDILRKYPGSYKSLVPILYENLDSLDEPDAKSAVIWILGQYAE---EIEDSITLLNDYL 470
Query: 441 AWCFKSEAVETKLQILNTTIKVLLCAKGGDMWTITRLFSYLLELAECDLNYDVRDRARFF 500
F E +E +L +L IKV L +T + + + + D+RDR +
Sbjct: 471 KGFF-DEPLEIQLTLLTAVIKVFLKKPTAAADMVTNVLQWCTDEVN---DPDLRDRGIIY 526
Query: 501 KKLFSHN 507
++ S N
Sbjct: 527 SRMLSAN 533
>sp|O43079|AP1B1_SCHPO AP-1 complex subunit beta-1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=apl2 PE=1 SV=1
Length = 683
Score = 94.0 bits (232), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 121/547 (22%), Positives = 226/547 (41%), Gaps = 74/547 (13%)
Query: 12 LVLVAVGKCARDPSVFVRKCAANALPKLHELRQEEITSAIEEIVGILLNDRSPGVVGAAA 71
L ++AV +D + A A+ + +R +I + + + L D P V AAA
Sbjct: 87 LCILAVNTFVKDSEEYNPTLRALAIRTMGCIRVNKIIGYLADPLRKALKDEHPYVRKAAA 146
Query: 72 AAFASICPNNFTLIGRNYRNLCQILPDVEEWGQILLIEILLRYVVASHGLVKESIMSSLL 131
+C + R Y C IE L V + +V + + SL
Sbjct: 147 -----VCVVKMYDLDREY---C---------ASNGFIEQLQALVSDPNPVVVANAVRSLA 189
Query: 132 CIESSHSEKDVFDVNVALEDNGIPSRTYDSELVNLVSRSYIEGLGEYLTRSSDTNARSSD 191
I EK F+V + D +V+ S G +S R+SD
Sbjct: 190 EIHDQDPEKGYFNVVYTMTDRL------------MVALSECNEWGRITILNSLARFRTSD 237
Query: 192 LNGARFTSGKTNDDVKLLLQCTSPLLWSHNSAVVLAAAGVHWIMSP--KEDV-----KRI 244
+ A + + P NS VVL+A V + P D K++
Sbjct: 238 IKEAEYVCERV-----------VPQFQHANSGVVLSAVKVIMVHIPLFSSDFTDFLYKKM 286
Query: 245 VKPLLFILRSSGASKYVVLCNIQVFAKALPHLFVPHYEDFFVSSSDSYQSKALKLEILSS 304
PLL +L + +YV L NI + + P +F FF +D K KL+I++
Sbjct: 287 APPLLTLLSTDSEIQYVALRNINLILQKRPSIFDVKTRVFFCKYNDPLYIKMEKLKIITM 346
Query: 305 IVTESSISSVFKEFQDYIRDPDRRFAADTVAAIGLCARKLPKMANTCVEGLLALIRQELL 364
+ + +I+ E + Y+ + + F T+ +G A K+P + N C+ L E+
Sbjct: 347 LACDENINETISELRAYVSEVELEFVKQTIKCLGDVALKVPSVINDCISIFL-----EIY 401
Query: 365 TSDIESGNGEADVLIQSIISIKSIIKQDPSCHEKLF----RSLDSIKVPEARVMIIWMVG 420
+I E V+++ +++++ P + L R ++ + P AR + W++G
Sbjct: 402 ELNISYMVQEVTVVME------TVLRKYPQKIDLLLPYLSRVIEELGDPRARSSMAWILG 455
Query: 421 EYSSVGVKIPRMLTTVLKYLAWCFKSEAVETKLQILNTTIKV-LLCAKGGDMWTITRLFS 479
E+S V ++L+ ++ +A E ++ +L +L +K+ L+ KG D + ++ +
Sbjct: 456 EFSHVIPTSSKLLSEMISTMA----DEDLQIQLALLTAVVKLSLMNGKGNDEELVQKVLN 511
Query: 480 YLLELAECDLNYDVRDRARFFKKLFSHNLCSQVPE----ETNALQENKDLPLVLVECIFR 535
Y + + N D+RDRA +++L + + + E ++ N +LP L++ +
Sbjct: 512 YAINQSS---NQDLRDRAFAYQRLLTPENVRKAQKIVCCEKPSVSYNNNLPEALLDALLC 568
Query: 536 KQENLAA 542
+ LA+
Sbjct: 569 EITTLAS 575
>sp|P46682|AP3B_YEAST AP-3 complex subunit beta OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=APL6 PE=1 SV=2
Length = 809
Score = 86.7 bits (213), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 156/331 (47%), Gaps = 41/331 (12%)
Query: 205 DVKLLLQCTSPLLWSHNSAVVLAAAGVHWIMSPKEDVK--RIVKPLL--FILRSSGASKY 260
D+ L LQ + L++S N V+L+ + ++ +K + ++ L+ + + +K
Sbjct: 298 DLDLFLQSLNCLIYSSNPTVILSCCNALYQLASPLQMKNTKFIEALVRTVTMTENQGNKE 357
Query: 261 VVLCNIQVFAKALPHLFVPHYEDFFVSSSDSYQSKALKLEILSSIVTESSISSVFKEFQD 320
++L I + LF+P+ + F+V D + K++ILS+++ ES++ +FKE +
Sbjct: 358 MLLQAIHFLSILDQTLFLPYTKKFYVFPKDPIVASIWKIQILSTLINESNVKEIFKELKY 417
Query: 321 YIRDPDRRFAADTVAAIGLCARKLPKMANTCVEGLLALIRQELLTSDIESGNGEADVLIQ 380
Y+ F + V + +++ + ++ + L +ES N A VL
Sbjct: 418 YV--ASAHFPENVVIMAVKSLSRCGQLSTSWESHVM-----KWLIDHMESHNLSASVLDA 470
Query: 381 SIISIKSIIKQDPSCHEK-LFRSLDSIKVP-----EARVMIIWMVGEYSSVGVKIPRMLT 434
+ I+ +++++P+ H + +F+ D + V AR I+W+ GE +S+ KI
Sbjct: 471 YVNVIRMLVQKNPTKHLRIIFKLADLLTVQTSLADNARAGIVWLFGEIASIEFKI---CP 527
Query: 435 TVLKYLAWCFKSEAVETKLQILNTTIKVL---------LCAKGGDMWT------------ 473
VL+ L F +E ET+ QIL + K+L G +
Sbjct: 528 DVLRRLIQNFSNEGPETRCQILVLSAKLLSYDIDNFKQAQVTGSEENNQNPPYYDFSGSR 587
Query: 474 ITRLFSYLLELAECDLNYDVRDRARFFKKLF 504
I+++++ +L LA+ D +D+RDRAR LF
Sbjct: 588 ISQMYNAVLYLAKYDDEFDIRDRARMISSLF 618
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 62/114 (54%)
Query: 1 MAGIRLHVISPLVLVAVGKCARDPSVFVRKCAANALPKLHELRQEEITSAIEEIVGILLN 60
++ +++ ++P++L V K DPS VR A A+ KL+ + + + +I+ L+
Sbjct: 142 LSDMKMSSLAPIILHTVKKLVTDPSAMVRGEVALAIIKLYRAGKNDYHEELLDILKELMA 201
Query: 61 DRSPGVVGAAAAAFASICPNNFTLIGRNYRNLCQILPDVEEWGQILLIEILLRY 114
D P V+ A A+ ++ L+ ++R C+I+ ++ W Q LIE+L++Y
Sbjct: 202 DTDPKVISCAVLAYKECYADHLELLHGHFRRYCRIIKQLDSWSQSYLIELLIKY 255
>sp|Q9WV76|AP4B1_MOUSE AP-4 complex subunit beta-1 OS=Mus musculus GN=Ap4b1 PE=2 SV=2
Length = 738
Score = 83.6 bits (205), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 147/304 (48%), Gaps = 41/304 (13%)
Query: 217 LWSHNSAVVLAAAGVHWIMSPK------EDVKRIVKPLLFILRSSGASK-YVVLCNIQVF 269
L S ++ VV+ A + I++ K + + R+ PLL S + LC+++
Sbjct: 244 LKSSSTGVVMGATKLFLILAKKFPHVQTDVLVRVKGPLLAACSSESRELCFAALCHVRQV 303
Query: 270 AKALPHLFVPHYEDFFVSSSDSYQSKALKLEILSSIVTESSISSVFKEFQDYIRDPDRRF 329
+LP F HY+ FF S S+ + K K+E+L +V + ++ V +E + Y D F
Sbjct: 304 LHSLPGHFSSHYKKFFCSYSEPHYIKLQKVEVLCELVNDENVQQVLEELRGYCTDVAADF 363
Query: 330 AADTVAAIGLCARKLPKMANTCVEGLLAL--IRQELLTSDIESGNGEADVLIQSIISIKS 387
A + AIG A+ + CV+ L L +RQE +T+ V++Q + +
Sbjct: 364 AQAAIFAIGSIAK---TYTDQCVQILTELLGLRQEHITT----------VVVQ---TFRD 407
Query: 388 IIKQDPSCHEKLFRSL----DSIKVPEARVMIIWMVGEYSSVGVKIPRMLTTVLKYLAWC 443
++ P C E + ++L ++I+ E + +IW++G + G KIP VL+
Sbjct: 408 LVWLCPQCTEAVCQALPGCEENIQDSEGKQALIWLLGVH---GEKIPNA-PYVLEDFVDN 463
Query: 444 FKSEAV-ETKLQILNTTIKVLLC--AKGGDMWTITRLFSYLLELAECDLNYDVRDRARFF 500
KSE K+++L ++++L A+ DM + RL Y +E E D+ VRDR F+
Sbjct: 464 VKSETFPAVKMELLTALMRLVLSRPAECQDM--LGRLLHYCIE-EEKDMA--VRDRGLFY 518
Query: 501 KKLF 504
+L
Sbjct: 519 YRLL 522
Score = 37.4 bits (85), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 53/117 (45%), Gaps = 8/117 (6%)
Query: 1 MAGIRLHVISPLVLVAVGKCARDPSVFVRKCAANALPKLHELRQE-EITSAIEEIVGILL 59
M G++ ++ P+V RD + +VR+ A K+H L + E+ A+ + LL
Sbjct: 114 MPGVQEYIQQPVV-----NGLRDKASYVRRVAVLGCAKMHNLHGDSEVDGALVNELYSLL 168
Query: 60 NDRSPGVVGAAAAAFASICPNNFTLIGRN--YRNLCQILPDVEEWGQILLIEILLRY 114
D+ P VV + I ++ +L + +++WGQ ++ LLRY
Sbjct: 169 RDQDPIVVVNCLRSLEEILKQEGGVVINKPIAHHLLNRMSKLDQWGQAEVLNFLLRY 225
>sp|Q9LDK9|APBLA_ARATH Beta-adaptin-like protein A OS=Arabidopsis thaliana GN=BETAA-AD
PE=1 SV=1
Length = 841
Score = 80.1 bits (196), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 145/329 (44%), Gaps = 36/329 (10%)
Query: 194 GARFTSGKTND--DVKLLLQCTSPLLWSHNSAVVLAAAGVHWIMS------PKEDVKRIV 245
++ +ND D+ LL+ L N AVVLA V ++ ++ +RI
Sbjct: 248 AVKYVPSDSNDIFDIMNLLE---DRLQHANGAVVLATVKVFLQLTLSMTDVHQQVYERIK 304
Query: 246 KPLLFILRS-SGASKYVVLCNIQVFAKALPHLFVPHYEDFFVSSSDSYQSKALKLEILSS 304
PLL ++ S S Y +L ++ + P +F Y+ F+ ++ K LKLE+L++
Sbjct: 305 SPLLTLVSSGSPEQSYAILSHLHLLVVRAPFIFAADYKHFYCQYNEPSYVKKLKLEMLTA 364
Query: 305 IVTESSISSVFKEFQDYIRDPDRRFAADTVAAIGLCARKLPKMANTCVEGLLALIRQELL 364
+ ES+ + E +Y + D A +++ A+G A + + N V+ LL + E
Sbjct: 365 VANESNTYEIVTELCEYAANVDIAIARESIRAVGKIALQQYDV-NAIVDRLLQFLEME-- 421
Query: 365 TSDIESGNGEADVLIQSIISIKSIIKQDPSCHEKLFR-----SLDSIKVPEARVMIIWMV 419
+ V ++++ +K ++++ P S +I+ P+A+ +IWM+
Sbjct: 422 ---------KDYVTAETLVLVKDLLRKYPQWSHDCISVVGGISSKNIQEPKAKAALIWML 472
Query: 420 GEYSSVGVKIPRMLTTVLKYLAWCFKSEAVETKLQILNTTIKVLLCAKGGDMWTITRLFS 479
GEY+ P +L +++ W + + E +L +L +K +
Sbjct: 473 GEYAQDMSDAPYVLENLIE--NWE-EEHSAEVRLHLLTAAMKCFFKRAP----ETQKALG 525
Query: 480 YLLELAECDLNYDVRDRARFFKKLFSHNL 508
L D + DV DRA F+ ++ +++
Sbjct: 526 TALAAGIADFHQDVHDRALFYYRVLQYDV 554
>sp|Q9Y6B7|AP4B1_HUMAN AP-4 complex subunit beta-1 OS=Homo sapiens GN=AP4B1 PE=1 SV=2
Length = 739
Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 156/337 (46%), Gaps = 41/337 (12%)
Query: 184 DTNARSSDLNGARFTSGKTNDDVKLLLQCTSPLLWSHNSAVVLAAAGVHWIMSP-----K 238
D ++ LN ++ +++ +L L S + VV+ A + I++ +
Sbjct: 211 DQWGQAEVLNFLLRYQPRSEEELFDILNLLDSFLKSSSPGVVMGATKLFLILAKMFPHVQ 270
Query: 239 EDV-KRIVKPLLFILRSSGASK-YVVLCNIQVFAKALPHLFVPHYEDFFVSSSDSYQSKA 296
DV R+ PLL S +V LC+++ +LP F HY+ FF S S+ + K
Sbjct: 271 TDVLVRVKGPLLAACSSESRELCFVALCHVRQILHSLPGHFSSHYKKFFCSYSEPHYIKL 330
Query: 297 LKLEILSSIVTESSISSVFKEFQDYIRDPDRRFAADTVAAIGLCARKLPKMANTCVEGLL 356
K+E+L +V + ++ V +E + Y D FA + AIG AR + CV+ L
Sbjct: 331 QKVEVLCELVNDENVQQVLEELRGYCTDVSADFAQAAIFAIGGIAR---TYTDQCVQILT 387
Query: 357 AL--IRQELLTSDIESGNGEADVLIQSIISIKSIIKQDPSCHEKLFRSL----DSIKVPE 410
L +RQE +T+ V++Q + + ++ P C E + ++L ++I+ E
Sbjct: 388 ELLGLRQEHITT----------VVVQ---TFRDLVWLCPQCTEAVCQALPGCEENIQDSE 434
Query: 411 ARVMIIWMVGEYSSVGVKIPRMLTTVLKYLAWCFKSE---AVETKLQILNTTIKVLLCAK 467
+ +IW++G + G +IP VL+ KSE AV+ +L + + A+
Sbjct: 435 GKQALIWLLGVH---GERIPNA-PYVLEDFVENVKSETFPAVKMELLTALLRLFLSRPAE 490
Query: 468 GGDMWTITRLFSYLLELAECDLNYDVRDRARFFKKLF 504
DM + RL Y +E E D+ VRDR F+ +L
Sbjct: 491 CQDM--LGRLLYYCIE-EEKDMA--VRDRGLFYYRLL 522
Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 53/117 (45%), Gaps = 8/117 (6%)
Query: 1 MAGIRLHVISPLVLVAVGKCARDPSVFVRKCAANALPKLHELRQE-EITSAIEEIVGILL 59
M G++ ++ P++ RD + +VR+ A K+H L + E+ A+ + LL
Sbjct: 114 MPGVQEYIQQPIL-----NGLRDKASYVRRVAVLGCAKMHNLHGDSEVDGALVNELYSLL 168
Query: 60 NDRSPGVVGAAAAAFASICPNNFTLIGRN--YRNLCQILPDVEEWGQILLIEILLRY 114
D+ P VV + I ++ +L + +++WGQ ++ LLRY
Sbjct: 169 RDQDPIVVVNCLRSLEEILKQEGGVVINKPIAHHLLNRMSKLDQWGQAEVLNFLLRY 225
>sp|P27351|AP2B_YEAST AP-2 complex subunit beta OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=APL1 PE=1 SV=2
Length = 700
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 114/235 (48%), Gaps = 24/235 (10%)
Query: 284 FFVSSSDSYQSKALKLEILSSIVTESSISSVFKEFQDYIRDPDRRFAADTVAAIGLCARK 343
FF+ +D K KLE L + + ++ + +E + Y D D + + +V AIG A K
Sbjct: 332 FFIEYNDPIYIKDTKLECLYLLANKETLPRILEELEQYATDIDIQMSRKSVRAIGNLAVK 391
Query: 344 LPK-MANTCVEGLLALIRQELLTSDIESGNGEADVLIQSIISI-KSIIKQDPSCHE---- 397
L + + CV LL L +E G D ++Q IIS+ ++I+++ P+ +
Sbjct: 392 LDEDSVHDCVAVLLDL---------LEFG---VDYVVQEIISVFRNILRKYPNNFKANVT 439
Query: 398 KLFRSLDSIKVPEARVMIIWMVGEYSSVGVKIPRMLTTVLKYLAWCFKSEAVETKLQILN 457
+L + + ++ PE++ +IW++ +YS V IP L + + F SE +E + ILN
Sbjct: 440 ELVKHTEVVQEPESKNAMIWIITQYSDV---IPNYLELFRVFSSNMF-SETLEVQFSILN 495
Query: 458 TTIKVLLCAKGGDMWTITRLFSYLLELAECDLNYDVRDRARFFKKLFSHNLCSQV 512
+ IK + + + + L + + N D+RD+ + +L S S++
Sbjct: 496 SAIKFFIRSPTKETEELC--MDLLKGCIDHENNPDLRDKTLMYWRLLSLTKTSRI 548
Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 10/108 (9%)
Query: 22 RDPSVFVRKCAANALPKLHELRQEEI---TSAIEEIVGILLNDRSPGVVGAAAAAFASIC 78
+ P V + A AL L E+ E + +S + +IV SP V+ AA SI
Sbjct: 140 KSPPEQVTRTAIYALLDLDEIDHERVLGLSSILHDIVKA--QSSSPEVIVAALHTLYSIH 197
Query: 79 PNN-----FTLIGRNYRNLCQILPDVEEWGQILLIEILLRYVVASHGL 121
N F + ++ ++LP++ EW + ++E+L VV H L
Sbjct: 198 EKNANMEPFRIPLELAFDMLELLPELNEWNKATVLEVLTTSVVPQHYL 245
>sp|Q54R84|AP4B_DICDI AP-4 complex subunit beta OS=Dictyostelium discoideum GN=ap4b1 PE=3
SV=1
Length = 838
Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 115/261 (44%), Gaps = 30/261 (11%)
Query: 242 KRIVKPLLFILRSSGASK--YVVLCNIQVFAKALPHLFVPHYEDFFVSSSDSYQSKALKL 299
+RI +PL+ ++ SS +++ + +L +I + P LF +Y+ F+ D K LK+
Sbjct: 286 ERIKEPLITLMESSESNETSFTILHHIHLLMSRSPRLFNRYYKHFYCKFDDPLYIKTLKV 345
Query: 300 EILSSIVTES----SISSVFKEFQDYIRDPDRRFAADTVAAIGLCARKLPKMANT--CVE 353
++L I + SI + +E +Y+ + D ++ AI + A+K E
Sbjct: 346 QVLKEIASNQTFIESIDEILQELSEYVYEGDHSLCKQSINAITVIAQKHKNTQEKYPIDE 405
Query: 354 GLLALIRQELLT-SDIESGNGEADVLIQS------IISIKSIIKQDPSCHEKLFRSLDSI 406
+L I L+ S G G+ ++ I +IS+K ++ P + + ++
Sbjct: 406 SVLEKIFLPYLSVSSNLGGAGDDNISINEGILSFILISLKDFLRVFPKHLKTVLPYINEN 465
Query: 407 KV-----------PEARVMIIWMVGEYSSVGVKIPRMLTTVLKYLAWCFKSEAVETKLQI 455
+ P A ++WM+GE + V P ++ ++ F + K Q+
Sbjct: 466 LIGIGSVSNYTLPPSANESVLWMLGESPNSQVNSPYIIE---EFFNEKFDQQPTFVKTQL 522
Query: 456 LNTTIKVLLCAKGGDMWTITR 476
L T++KV + G+M I +
Sbjct: 523 LTTSLKVFF-DRPGEMLPILK 542
Score = 40.4 bits (93), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 10/109 (9%)
Query: 15 VAVGKCARDPSVFVRKCAANALPKLHELRQE--EITSAIEEIVGILLNDRSPGVVGAAAA 72
+ + + D S +VRK A L KL+ L +E ++ I +I +++ D+ P V+ A +
Sbjct: 137 IEINRSLTDFSGYVRKTALLGLAKLYHLSKEAFDLDIIIPKIFDMIM-DQDPQVIVNAVS 195
Query: 73 AFASICPN---NFTLIGRNYRNLCQILPDVEEWGQILLIEILLRYVVAS 118
I P F L+ ++L + EW Q +++E L RY +S
Sbjct: 196 TLNEIKPGWSFTFDLV----QHLMIKFKEFNEWSQCIILECLSRYTPSS 240
>sp|P36000|AP1B1_YEAST AP-1 complex subunit beta-1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=APL2 PE=1 SV=1
Length = 726
Score = 40.0 bits (92), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 67/335 (20%), Positives = 142/335 (42%), Gaps = 59/335 (17%)
Query: 221 NSAVVLAAAGVHWIMSPKED-------VKRIVKPLLFILRSSGASKYVVLCNIQVFAKAL 273
N AVVLA V P+ + +KR+ + ++ + +YV L NI++ +
Sbjct: 266 NPAVVLATIKVIVRNLPQIEYSSNSLIMKRLSSAFVSLMSTPPEMQYVALKNIRIILEKY 325
Query: 274 PHLFVPHYEDFFVSSSDSYQSKALKLEILSSIVTESSISS---VFKEFQDYIRDPDRRFA 330
P L F+V +D K K++IL +V S++ + E ++Y + + F
Sbjct: 326 PELLTKELRIFYVKFNDPLYVKLEKIDILVRLVDPSNLKQCTLLLTELKEYAMEYEPEFV 385
Query: 331 ADTVAAIGLCARKLPK--MANTCVEGLLALI-RQELLTSDIESGNGEADVLIQSIISIKS 387
+ + A+ K + + ++ LL L+ RQ+ + D IS+
Sbjct: 386 SRAIQALSQLGIKYAQESFVSKVLDILLELLERQDTIKDD-------------CCISLCD 432
Query: 388 IIKQDPSCHEKLFRSL----DSIKVPE-------ARVMIIWMVGEYSSVGVKIPRMLTTV 436
+++ P ++K+ + + ++ PE A+ +W++G++ + + +
Sbjct: 433 LLRHCPG-NDKMAKQVCAVFNTWSNPEVLLQSDIAKCNYVWLLGQHPNNFSDLESKINIF 491
Query: 437 LKYLAWCFKSEAVETKLQILNTTIKVLLCAKGGDMWTITRLFSYLLELAECDLN-YDVRD 495
++ F E T++ +L T +++ G + +LELA + DVRD
Sbjct: 492 IEN----FVQEEALTQMSLLMTIVRLHATLTGS-------MLQSVLELATQQTHELDVRD 540
Query: 496 RARFFKKLFS--------HNLC-SQVPEETNALQE 521
A + + S ++LC +++P +N L++
Sbjct: 541 MAMMYWRCLSMPNNESLVNDLCQNKLPMISNTLEK 575
>sp|Q9UUF7|COPB_SCHPO Coatomer subunit beta OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=sec26 PE=3 SV=1
Length = 940
Score = 37.4 bits (85), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 28/151 (18%)
Query: 285 FVSSSDSYQSKALKLEILSSIVTESSISSVFKEFQDYI--------RDPDRRFAADTVAA 336
F+SSSD + + I+ +V+ ++ + FQ + +D RR A A
Sbjct: 322 FLSSSD-FDVCEKAISIIMGLVSSRNVEDILNHFQKELTKSNGETEKDDGRRRA--LTKA 378
Query: 337 IGLCARKLPKMANTCVEGLLALIRQELLTSDIESGNGEADVLIQSIIS-IKSIIKQDPSC 395
I CA P A T ++ LL+ I SD +S + S++S IK ++++ P
Sbjct: 379 IHSCAINFPHTAATAIQYLLSHI------SDFQSKSA------SSVLSFIKEVMEKFPDL 426
Query: 396 HE----KLFRSLDSIKVPEARVMIIWMVGEY 422
KL SL ++ + +IW+ GEY
Sbjct: 427 RSSNITKLLLSLKELRAGKIFRGVIWIAGEY 457
>sp|Q54HL0|COPG_DICDI Coatomer subunit gamma OS=Dictyostelium discoideum GN=copG PE=1
SV=1
Length = 898
Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 117/284 (41%), Gaps = 36/284 (12%)
Query: 259 KYVVLCNIQVFAKALPHLFVPHYEDFFVSSSDSYQSKA-LKLEILSSIVTESSISSVFKE 317
++ + + A+ P +P D +D+ +S A L + L + ES++ + K+
Sbjct: 301 RFAAVRTLNKLAQTNPTAVIPCNLDMENLITDTNRSIATLAITTLLKVGNESNVERLIKQ 360
Query: 318 FQDYIRDPDRRFAADTVAAIGLCARKLPKMANTCVEGLLALIRQELLTSDIESGNGEADV 377
+++ D + F V AI ++K PK + L ++R E G +
Sbjct: 361 IANFLGDINDEFKIVVVDAITSLSQKFPKKYKHLIIFLNKILRDE----------GTLQL 410
Query: 378 LIQSIISIKSIIKQDPSCHE----KLFRSLDSIKVPEARVMIIWMVGEYSSVGVKIPRML 433
++ +I +++ P E +L ++ P+ V I+ ++G+ +
Sbjct: 411 KQATLDAILTVVNNIPESKEIALTELCDYIEDCDFPDLSVQILHLIGQEGP-------LT 463
Query: 434 TTVLKYLAWCFKSEAVETKLQILNTTIKVLLCAKGGDMWTITRLFSYLLELAECDLNYD- 492
++ +Y+ + + ++ + V AK G ++ + +L L C L+ D
Sbjct: 464 SSPAQYMRYIYNRVLLDGGII---RAAAVTSIAKFGLLYEPMKEKVVIL-LQRCLLDEDD 519
Query: 493 -VRDRARFFKKLFSHN--------LCSQVPEETNALQENKDLPL 527
VRDRA + KLF N L VP N LQ++ +L L
Sbjct: 520 EVRDRATLYLKLFKENDVRYLNKVLMDDVPVPLNNLQKSLELYL 563
>sp|Q03JN2|REX_STRTD Redox-sensing transcriptional repressor rex OS=Streptococcus
thermophilus (strain ATCC BAA-491 / LMD-9) GN=rex PE=3
SV=1
Length = 219
Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%)
Query: 455 ILNTTIKVLLCAKGGDMWTITRLFSYLLELAECDLNYDVRDRARFFKKLFSHNLCSQV 512
I+ T+ K + A G D T+ R FSY EL YDV FF +L + N ++V
Sbjct: 30 IVKTSSKQIAEAIGIDPATVRRDFSYFGELGRRGFGYDVSKLMTFFAELLNDNATTKV 87
>sp|P41810|COPB_YEAST Coatomer subunit beta OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SEC26 PE=1 SV=2
Length = 973
Score = 34.3 bits (77), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 66/142 (46%), Gaps = 23/142 (16%)
Query: 293 QSKAL--KLEILSSIVTESSISSVFKEFQDYIRDPDR----RFAADTVAAIGLCARKLPK 346
+SKAL +++ +S E + + KE Q + +PD+ ++ + I A +
Sbjct: 338 RSKALDISMDLATSRNAEDVVQLLKKELQTTVNNPDQDKAMQYRQLLIKTIRTVAVNFVE 397
Query: 347 MANTCVEGLLALIRQELLTSDIESGNGEADVLIQSIIS-IKSIIKQDPSCH----EKLFR 401
MA + V LL I D+ S V II+ IK +I++ P E + +
Sbjct: 398 MAASVVSLLLDFI------GDLNS------VAASGIIAFIKEVIEKYPQLRANILENMVQ 445
Query: 402 SLDSIKVPEARVMIIWMVGEYS 423
+LD ++ +A +W++GEY+
Sbjct: 446 TLDKVRSAKAYRGALWIMGEYA 467
>sp|A3EWL3|REV1_ARATH DNA repair protein REV1 OS=Arabidopsis thaliana GN=REV1 PE=2 SV=1
Length = 1105
Score = 33.9 bits (76), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 66/160 (41%), Gaps = 10/160 (6%)
Query: 483 ELAECDLNYDVRDRARFFKKLFSHNLCSQVPEET--NALQENKDLPLVLVECIFRKQENL 540
EL + Y R F ++ +H +CS +P+ N ++ LP+V I +++
Sbjct: 105 ELKGYMMKYGGRFENYFSRRSVTHIICSNLPDSKVKNLRTFSRGLPVVKPTWIV---DSI 161
Query: 541 AASEPINDRFYLPGSLSQIVLHAAPGYEPLPKPCSSLCDDLGQFSNSIDRTTALGEEWTG 600
+A+ + ++P L Q+ P P S L + S T E G
Sbjct: 162 SANRLLG---WVPYQLDQLN-DTQPKLSAFFAPRSHLTPQMASPVTSFQPDTGYSEAEEG 217
Query: 601 SSSNGTDDPDTSGSLDEESGSNYDSQQSIPGLSDNSGTGD 640
SS D + +D+E Y + + P L++ +GTGD
Sbjct: 218 SSIRADDSEEARDHIDDEIDGVY-IENTTPELTEQTGTGD 256
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 356,402,427
Number of Sequences: 539616
Number of extensions: 14989544
Number of successful extensions: 44631
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 39742
Number of HSP's gapped (non-prelim): 2845
length of query: 1007
length of database: 191,569,459
effective HSP length: 128
effective length of query: 879
effective length of database: 122,498,611
effective search space: 107676279069
effective search space used: 107676279069
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)