BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001846
(1006 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C5U0|AHK4_ARATH Histidine kinase 4 OS=Arabidopsis thaliana GN=AHK4 PE=1 SV=1
Length = 1080
Score = 1379 bits (3569), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 706/1009 (69%), Positives = 800/1009 (79%), Gaps = 42/1009 (4%)
Query: 11 HSVALKVN-----EQMGTKIGYTFIQSNRAWLPKALVLWIMGMAFISMSIYRGMDEENKI 65
HSVA+K+N + MG K G TFIQ +RA LPKAL+LWI+ + FIS IY+ MD+ NKI
Sbjct: 96 HSVAVKMNNNNNNDLMGNKKGSTFIQEHRALLPKALILWIIIVGFISSGIYQWMDDANKI 155
Query: 66 RRKEVLGSMCDQRARMLQDQFNVTVNHVHALTILVSTFHYFKNPSALDQDTFAEYTTRTA 125
RR+EVL SMCDQRARMLQDQF+V+VNHVHAL ILVSTFHY KNPSA+DQ+TFAEYT RTA
Sbjct: 156 RREEVLVSMCDQRARMLQDQFSVSVNHVHALAILVSTFHYHKNPSAIDQETFAEYTARTA 215
Query: 126 FERPLLSGVAYAPRVVDAQREQFERQHGMTITTM-KSEPSPIRDEYAPVMFYQEPMSHVK 184
FERPLLSGVAYA +VV+ +RE FERQH I TM + EPSP+RDEYAPV+F Q+ +S+++
Sbjct: 216 FERPLLSGVAYAEKVVNFEREMFERQHNWVIKTMDRGEPSPVRDEYAPVIFSQDSVSYLE 275
Query: 185 SLDMMSGEEDRENILRARATGKAVLTRPFRLLGSHHLGVVLTFPVYKSKLPPRSTVEERI 244
SLDMMSGEEDRENILRAR TGKAVLT PFRLL +HHLGVVLTFPVYKS LP TVEERI
Sbjct: 276 SLDMMSGEEDRENILRARETGKAVLTSPFRLLETHHLGVVLTFPVYKSSLPENPTVEERI 335
Query: 245 KATAGYIGGPFDVESLVENLLGQLAGNQAILVNVYDMTNASDPLIMYGDQNQDGDMSLLH 304
ATAGY+GG FDVESLVENLLGQLAGNQAI+V+VYD+TNASDPL+MYG+Q+++ D SL H
Sbjct: 336 AATAGYLGGAFDVESLVENLLGQLAGNQAIVVHVYDITNASDPLVMYGNQDEEADRSLSH 395
Query: 305 ESELDFGDSFRKHKMICRYHQKASTPWTALTTAFFLFVIGLLVGYILYGAAIHIVKVEDD 364
ES+LDFGD FRKHKMICRYHQKA P LTT F IG LVGYILYGAA+HIVKVEDD
Sbjct: 396 ESKLDFGDPFRKHKMICRYHQKAPIPLNVLTTVPLFFAIGFLVGYILYGAAMHIVKVEDD 455
Query: 365 FHKMQELKVRAEAADVAKSQFLATVSHEIRTPMNGILGMLALLLDTDLSSTQRDYAQTAQ 424
FH+MQELKVRAEAADVAKSQFLATVSHEIRTPMNGILGMLA+LLDT+LSSTQRDYAQTAQ
Sbjct: 456 FHEMQELKVRAEAADVAKSQFLATVSHEIRTPMNGILGMLAMLLDTELSSTQRDYAQTAQ 515
Query: 425 ICGKALIALINEVLDRAKIEARKLELEAVLFNLRAILDDVLSLFSEKSRNKGIELAVFVS 484
+CGKALIALINEVLDRAKIEA KLELE+V F++R+ILDDVLSLFSE+SRNK IELAVFVS
Sbjct: 516 VCGKALIALINEVLDRAKIEAGKLELESVPFDIRSILDDVLSLFSEESRNKSIELAVFVS 575
Query: 485 DKVPEFVLGDPGRFRQIITNLVGNSVKFTERGHIFVKVHLAERTMVKTDAKDETLLNGG- 543
DKVPE V GD GRFRQII NLVGNSVKFTE+GHIFVKVHLAE++ K +++ + LNGG
Sbjct: 576 DKVPEIVKGDSGRFRQIIINLVGNSVKFTEKGHIFVKVHLAEQS--KDESEPKNALNGGV 633
Query: 544 TEEGVCRSGTGQFNTLSGLEAADGRNSWDKFKHLIDAEGFQSNASIINMMASNGGSEDVT 603
+EE + S +NTLSG EAADGRNSWD FKHL+ E S I S +V
Sbjct: 634 SEEMIVVSKQSSYNTLSGYEAADGRNSWDSFKHLVSEEQSLSEFDI---------SSNVR 684
Query: 604 LMVCVEDTGIGIPLSAQERVFMPFMQADSSTSRHYGGTGIGLSISKCLVELMRGQISFVS 663
LMV +EDTGIGIPL AQ RVFMPFMQADSSTSR+YGGTGIGLSISKCLVELMRGQI+F+S
Sbjct: 685 LMVSIEDTGIGIPLVAQGRVFMPFMQADSSTSRNYGGTGIGLSISKCLVELMRGQINFIS 744
Query: 664 RPQVGSTFSFTAVFGKC-KEYVFEDIKQSKSEDLPPGFKGLKAVVVDEKPVRAAVTQYHL 722
RP +GSTF FTAV KC K +K+ E LP FKG+KA+VVD KPVRAAVT+YH+
Sbjct: 745 RPHIGSTFWFTAVLEKCDKCSAINHMKKPNVEHLPSTFKGMKAIVVDAKPVRAAVTRYHM 804
Query: 723 NRLGIMVKMSSSIKDASSTA----KNGLTSSEDKFQPDIILVEKDCWISGEDSGFNAQLL 778
RLGI V + +S+K A A +NG + K Q D+ILVEKD WIS ED+ +LL
Sbjct: 805 KRLGINVDVVTSLKTAVVAAAAFERNG-SPLPTKPQLDMILVEKDSWISTEDNDSEIRLL 863
Query: 779 DWKPNGHV-FKLPKLILLATNISKDECDKAKAGGFADTVIMKPLRASMIAACLQQVLSTE 837
+ + NG+V K PKL L ATNI+ E D+AK+ GFADTVIMKPLRASMI ACLQQVL
Sbjct: 864 NSRTNGNVHHKSPKLALFATNITNSEFDRAKSAGFADTVIMKPLRASMIGACLQQVLELR 923
Query: 838 NKRQAGRGVPNGSS--FHQGLLRGKKILVVDDNGVNRMVAAGALKKFGATVECAASAKAA 895
RQ P GSS + LL GKKILVVDDN VNR VAAGALKKFGA V CA S + A
Sbjct: 924 KTRQQH---PEGSSPATLKSLLTGKKILVVDDNIVNRRVAAGALKKFGAEVVCAESGQVA 980
Query: 896 LDKLQSPHCFDACFMDIQMPEMDGFEATRRIRQMESKANEQMMNGGSSVDGTAKRDELHL 955
L LQ PH FDACFMDIQMP+MDGFEATR+IR ME + E+ E HL
Sbjct: 981 LGLLQIPHTFDACFMDIQMPQMDGFEATRQIRMMEKETKEK------------TNLEWHL 1028
Query: 956 PILAMTADVIHATFDECLKCGMDGYVSKPFEEENLYRELAKFFKSKPLS 1004
PILAMTADVIHAT++ECLK GMDGYVSKPFEEENLY+ +AK FK P+S
Sbjct: 1029 PILAMTADVIHATYEECLKSGMDGYVSKPFEEENLYKSVAKSFKPNPIS 1077
>sp|Q9C5U2|AHK2_ARATH Histidine kinase 2 OS=Arabidopsis thaliana GN=AHK2 PE=1 SV=1
Length = 1176
Score = 998 bits (2580), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 531/981 (54%), Positives = 670/981 (68%), Gaps = 53/981 (5%)
Query: 36 WLPKALVLWIMGMAFISMSIYRGMDEENKIRRKEVLGSMCDQRARMLQDQFNVTVNHVHA 95
W L+L I+G S+ + +EE ++R+E L +MCD+RAR+LQDQFNV++NHVHA
Sbjct: 230 WRKNILLLGILGGVSFSVWWFWDTNEEIIMKRRETLANMCDERARVLQDQFNVSLNHVHA 289
Query: 96 LTILVSTFHYFKNPSALDQDTFAEYTTRTAFERPLLSGVAYAPRVVDAQREQFERQHGMT 155
L+ILVSTFH+ K PSA+DQ TF EYT RT FERPL SGVAYA +V ++RE+FE++HG
Sbjct: 290 LSILVSTFHHGKIPSAIDQRTFEEYTERTNFERPLTSGVAYALKVPHSEREKFEKEHGWA 349
Query: 156 ITTMKSE--------------PSPIRDEYAPVMFYQEPMSHVKSLDMMSGEEDRENILRA 201
I M++E P+PI+DEYAPV+F QE +SH+ S+DMMSGEEDRENILRA
Sbjct: 350 IKKMETEDQTVVQDCVPENFDPAPIQDEYAPVIFAQETVSHIVSVDMMSGEEDRENILRA 409
Query: 202 RATGKAVLTRPFRLLGSHHLGVVLTFPVYKSKLPPRSTVEERIKATAGYIGGPFDVESLV 261
RA+GK VLT PF+LL S+HLGVVLTF VY + LPP +T E+R++AT GY+G +D+ SLV
Sbjct: 410 RASGKGVLTSPFKLLKSNHLGVVLTFAVYDTSLPPDATEEQRVEATIGYLGASYDMPSLV 469
Query: 262 ENLLGQLAGNQAILVNVYDMTNASDPLIMYGDQNQDGDMSLLHESELDFGDSFRKHKMIC 321
E LL QLA Q I V+VYD TN S + MYG ++ GD+S H S LDFGD R H+M C
Sbjct: 470 EKLLHQLASKQTIAVDVYDTTNTSGLIKMYG--SEIGDISEQHISSLDFGDPSRNHEMHC 527
Query: 322 RYHQKASTPWTALTTAFFLFVIGLLVGYILYGAAIHIVKVEDDFHKMQELKVRAEAADVA 381
R+ K PWTA+T + + VI LVGYILY A I VE+D KM+ELK RAEAAD+A
Sbjct: 528 RFKHKLPIPWTAITPSILVLVITFLVGYILYEAINRIATVEEDCQKMRELKARAEAADIA 587
Query: 382 KSQFLATVSHEIRTPMNGILGMLALLLDTDLSSTQRDYAQTAQICGKALIALINEVLDRA 441
KSQFLATVSHEIRTPMNG+LGML +L+DTDL + Q DYAQTA GK L +LINEVLD+A
Sbjct: 588 KSQFLATVSHEIRTPMNGVLGMLKMLMDTDLDAKQMDYAQTAHGSGKDLTSLINEVLDQA 647
Query: 442 KIEARKLELEAVLFNLRAILDDVLSLFSEKSRNKGIELAVFVSDKVPEFVLGDPGRFRQI 501
KIE+ +LELE V F++R ILD+V SL S K+ KGIELAV+VS +VP+ V+GDP RFRQI
Sbjct: 648 KIESGRLELENVPFDMRFILDNVSSLLSGKANEKGIELAVYVSSQVPDVVVGDPSRFRQI 707
Query: 502 ITNLVGNSVKFT-ERGHIFVKVHLAERTMVKTDAKDETLLNGGTEEGVCRSGTGQFNTLS 560
ITNLVGNS+KFT ERGHIF+ VHLA+ +D +L G SG T+S
Sbjct: 708 ITNLVGNSIKFTQERGHIFISVHLADEVKEPLTIED-AVLKQRLALGCSESG----ETVS 762
Query: 561 GLEAADGRNSWDKFKHLIDAEGFQSNASIINMMASNGGSEDVTLMVCVEDTGIGIPLSAQ 620
G A + SW FK E + S+ + L+V VEDTG+GIP+ AQ
Sbjct: 763 GFPAVNAWGSWKNFKTCYSTE--------------SQNSDQIKLLVTVEDTGVGIPVDAQ 808
Query: 621 ERVFMPFMQADSSTSRHYGGTGIGLSISKCLVELMRGQISFVSRPQVGSTFSFTAVFGKC 680
R+F PFMQADSSTSR YGGTGIGLSISK LVELM+G++ FVS P +GSTFSFT VFGK
Sbjct: 809 GRIFTPFMQADSSTSRTYGGTGIGLSISKRLVELMQGEMGFVSEPGIGSTFSFTGVFGKA 868
Query: 681 KEYVFEDIKQSKSEDLP-PGFKGLKAVVVDEKPVRAAVTQYHLNRLGIMVKMSSSIKDAS 739
+ I + + DL F GL+A+V+D + +RA VT+Y L RLGI + SS++ A
Sbjct: 869 ETNT--SITKLERFDLAIQEFTGLRALVIDNRNIRAEVTRYELRRLGISADIVSSLRMAC 926
Query: 740 STAKNGLTSSEDKFQPDIILVEKDCWISGEDSGFNAQLLDWKPNGHVFKLPKLILLATNI 799
+ + L + +IL++KD W E S + K ++PK+ LLAT+
Sbjct: 927 TCCISKLENLA------MILIDKDAWNKEEFSVLDELFTRSKVT--FTRVPKIFLLATSA 978
Query: 800 SKDECDKAKAGGFADTVIMKPLRASMIAACLQQVLSTENKRQAGRGVPNGSSFHQG-LLR 858
+ E + K+ G D V++KPLR S++ CLQ+ L KRQ PN + G LLR
Sbjct: 979 TLTERSEMKSTGLIDEVVIKPLRMSVLICCLQETLVNGKKRQ-----PNRQRRNLGHLLR 1033
Query: 859 GKKILVVDDNGVNRMVAAGALKKFGATVECAASAKAALDKLQSPHCFDACFMDIQMPEMD 918
K+ILVVDDN VNR VA GALKK+GA V C S KAAL L+ PH FDACFMD+QMPEMD
Sbjct: 1034 EKQILVVDDNLVNRRVAEGALKKYGAIVTCVESGKAALAMLKPPHNFDACFMDLQMPEMD 1093
Query: 919 GFEATRRIRQMESKANEQMMNGGSSVDGTAKRDELHLPILAMTADVIHATFDECLKCGMD 978
GFEATRR+R++E + N+++ +G S + K H+PILAMTADVI AT +EC+KCGMD
Sbjct: 1094 GFEATRRVRELEREINKKIASGEVSAEMFCKFSSWHVPILAMTADVIQATHEECMKCGMD 1153
Query: 979 GYVSKPFEEENLYRELAKFFK 999
GYVSKPFEEE LY +A+FF+
Sbjct: 1154 GYVSKPFEEEVLYTAVARFFE 1174
>sp|Q9C5U1|AHK3_ARATH Histidine kinase 3 OS=Arabidopsis thaliana GN=AHK3 PE=1 SV=1
Length = 1036
Score = 988 bits (2553), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 531/1013 (52%), Positives = 682/1013 (67%), Gaps = 67/1013 (6%)
Query: 8 NHCHSVALKVNEQMGTKIGYTFIQS---NRAWLPKALVLWIMGMAFISMSIYRGMDEENK 64
N S LK+ Y F+ S N+AW K +V+W++ +S+ + +
Sbjct: 65 NKISSSGLKI-----PSFSYQFLGSVKFNKAWWRKLVVVWVVFWVLVSIWTFWYFSSQAM 119
Query: 65 IRRKEVLGSMCDQRARMLQDQFNVTVNHVHALTILVSTFHYFKNPSALDQDTFAEYTTRT 124
+RKE L SMCD+RARMLQDQFNV++NHV A++IL+STFH+ K PSA+DQ TF+EYT RT
Sbjct: 120 EKRKETLASMCDERARMLQDQFNVSMNHVQAMSILISTFHHGKIPSAIDQRTFSEYTDRT 179
Query: 125 AFERPLLSGVAYAPRVVDAQREQFERQHGMTITTMKS----------------EPSPIRD 168
+FERPL SGVAYA RV+ ++RE+FERQ G TI M S EPSP+++
Sbjct: 180 SFERPLTSGVAYAMRVLHSEREEFERQQGWTIRKMYSLEQNPVHKDDYDLEALEPSPVQE 239
Query: 169 EYAPVMFYQEPMSHVKSLDMMSGEEDRENILRARATGKAVLTRPFRLLGSHHLGVVLTFP 228
EYAPV+F Q+ +SHV SLDM+SG+EDREN+LRAR++GK VLT PF L+ ++ LGV+LTF
Sbjct: 240 EYAPVIFAQDTVSHVVSLDMLSGKEDRENVLRARSSGKGVLTAPFPLIKTNRLGVILTFA 299
Query: 229 VYKSKLPPRSTVEERIKATAGYIGGPFDVESLVENLLGQLAGNQAILVNVYDMTNASDPL 288
VYK LP +T +ERI+AT GY+GG FD+ESLVENLL QLA Q ILVNVYD+TN S P+
Sbjct: 300 VYKRDLPSNATPKERIEATNGYLGGVFDIESLVENLLQQLASKQTILVNVYDITNHSQPI 359
Query: 289 IMYG-DQNQDGDMSLLHESELDFGDSFRKHKMICRYHQKASTPWTALTTAFFLFVIGLLV 347
MYG + + DG L S L FGD RKH+M CR+ QK P ++ T+F + VI LLV
Sbjct: 360 SMYGTNVSADG---LERVSPLIFGDPLRKHEMRCRFKQKPPWPVLSMVTSFGILVIALLV 416
Query: 348 GYILYGAAIHIVKVEDDFHKMQELKVRAEAADVAKSQFLATVSHEIRTPMNGILGMLALL 407
+I++ I KVE+D KM++LK +AEAADVAKSQFLATVSHEIRTPMNG+LGML +L
Sbjct: 417 AHIIHATVSRIHKVEEDCDKMKQLKKKAEAADVAKSQFLATVSHEIRTPMNGVLGMLHML 476
Query: 408 LDTDLSSTQRDYAQTAQICGKALIALINEVLDRAKIEARKLELEAVLFNLRAILDDVLSL 467
+DT+L TQ+DY +TAQ GKAL++LINEVLD+AKIE+ KLELE V F+LR ILDDVLSL
Sbjct: 477 MDTELDVTQQDYVRTAQASGKALVSLINEVLDQAKIESGKLELEEVRFDLRGILDDVLSL 536
Query: 468 FSEKSRNKGIELAVFVSDKVPEFVLGDPGRFRQIITNLVGNSVKFTERGHIFVKVHLAER 527
FS KS+ KG+ELAV++SD+VP+ ++GDPGRFRQI+TNL+GNS+KFTE+GHIFV VHL +
Sbjct: 537 FSSKSQQKGVELAVYISDRVPDMLIGDPGRFRQILTNLMGNSIKFTEKGHIFVTVHLVDE 596
Query: 528 TMVKTDAKDETLLNGGTEEGVCRSGTGQFNTLSGLEAADGRNSWDKFKHLIDAEGFQSNA 587
D + + + +TLSGL AD + SW+ FK F SN
Sbjct: 597 LFESIDGE---------------TASSPESTLSGLPVADRQRSWENFK------AFSSNG 635
Query: 588 SIINMMASNGGSEDVTLMVCVEDTGIGIPLSAQERVFMPFMQADSSTSRHYGGTGIGLSI 647
+ D+ L+V VEDTG+GIP+ AQ R+F PFMQ S SR +GGTGIGLSI
Sbjct: 636 H----RSFEPSPPDINLIVSVEDTGVGIPVEAQSRIFTPFMQVGPSISRTHGGTGIGLSI 691
Query: 648 SKCLVELMRGQISFVSRPQVGSTFSFTAVFGKCKEYVFEDIKQSKSEDLPPGFKGLKAVV 707
SKCLV LM+G+I F S P+VGSTF+FTAVF + + K ++ + F+G+KAVV
Sbjct: 692 SKCLVGLMKGEIGFSSTPKVGSTFTFTAVFSNGMQPA--ERKNDNNQPIFSEFRGMKAVV 749
Query: 708 VDEKPVRAAVTQYHLNRLGIMVKMSSSIKDASSTAKNGLTSSEDKFQPDIILVEKDCWIS 767
VD +P RA V+ YH RLGI V++ ++ A K G T+ ++IL+E++ W +
Sbjct: 750 VDHRPARAKVSWYHFQRLGIRVEVVPRVEQALHYLKIGTTTV------NMILIEQEIW-N 802
Query: 768 GEDSGFNAQLLDWKPNGHVFKLPKLILLATNISKDECDKAKAGGFADTVIMKPLRASMIA 827
E F +L +F PKLILLA ++ + G VI+KPLRASM+A
Sbjct: 803 READDFIKKL----QKDPLFLSPKLILLANSVESSISEALCTGIDPPIVIVKPLRASMLA 858
Query: 828 ACLQQVLSTENKRQAGRGVPNGSSFHQGLLRGKKILVVDDNGVNRMVAAGALKKFGATVE 887
A LQ+ L + P + LL G+KIL+VDDN VN VAAGALKK+GA V
Sbjct: 859 ATLQRGLGIGIREPPQHKGPPALIL-RNLLLGRKILIVDDNNVNLRVAAGALKKYGADVV 917
Query: 888 CAASAKAALDKLQSPHCFDACFMDIQMPEMDGFEATRRIRQMESKANEQMMNGGSSVDGT 947
CA S A+ L+ PH FDACFMDIQMPEMDGFEATRRIR ME + N+++ NG + +
Sbjct: 918 CAESGIKAISLLKPPHEFDACFMDIQMPEMDGFEATRRIRDMEEEMNKRIKNGEALIVEN 977
Query: 948 AKRDELHLPILAMTADVIHATFDECLKCGMDGYVSKPFEEENLYRELAKFFKS 1000
+ HLP+LAMTADVI AT +ECLKCGMDGYVSKPFE E LYRE+++FF S
Sbjct: 978 GNKTSWHLPVLAMTADVIQATHEECLKCGMDGYVSKPFEAEQLYREVSRFFNS 1030
>sp|Q9SXL4|AHK1_ARATH Histidine kinase 1 OS=Arabidopsis thaliana GN=AHK1 PE=1 SV=2
Length = 1207
Score = 169 bits (427), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 118/379 (31%), Positives = 181/379 (47%), Gaps = 50/379 (13%)
Query: 334 LTTAFFLFVIGLLVGYILYGAAIHIVKVEDDFHKMQELKVRAEAADVAKSQFLATVSHEI 393
++ + +F IG + IL +K+ + + + + RAEA+ KSQFLA +SHE+
Sbjct: 451 ISASVCIFFIGCVCILILTNGVSKEMKLRAELIRQLDARRRAEASSNYKSQFLANMSHEL 510
Query: 394 RTPMNGILGMLALLLDTDLSSTQRDYAQTAQI--CGKALIALINEVLDRAKIEARKLELE 451
RTPM ++G+L +L+ D S ++ YA QI C AL+ L+N +LD +K+E+ KL LE
Sbjct: 511 RTPMAAVIGLLDILISDDCLSNEQ-YATVTQIRKCSTALLRLLNNILDLSKVESGKLVLE 569
Query: 452 AVLFNLRAILDDVLSLFSEKSRNKGIELAVFVSDKVPEFVLGDPGRFRQIITNLVGNSVK 511
F+L L+ ++ +FS + N +E + +SD +P V GD R QI NL+ NS+K
Sbjct: 570 EAEFDLGRELEGLVDMFSVQCINHNVETVLDLSDDMPALVRGDSARLVQIFANLISNSIK 629
Query: 512 FTERGHIFVKVHLAERTMVKTDAKDETLLNGGTEEGVCRSGTGQFNTLSGLEAADGRNSW 571
FT GHI ++ G C + + +S + D R W
Sbjct: 630 FTTTGHIILR-------------------------GWCENINSLHDEMS--VSVDRRKPW 662
Query: 572 D--KFKHLIDAEGFQSNASIINMMASNGGSEDVTLMVCVEDTGIGIPLSAQERVFMPFMQ 629
K K + Q + N M L V+DTG GI S + VF F Q
Sbjct: 663 APMKTKQVQHRNHLQKSCKNANKMV---------LWFEVDDTGCGIDPSKWDSVFESFEQ 713
Query: 630 ADSSTSRHYGGTGIGLSISKCLVELMRGQISFVSRPQVGSTFSFTAVFGKCKEYVFEDIK 689
AD ST+R +GGTG+GL I + LV M G+I V + +G+ Y+
Sbjct: 714 ADPSTTRTHGGTGLGLCIVRNLVNKMGGEIKVVQKNGLGTLMRL---------YLILSTP 764
Query: 690 QSKSEDLPPGFKGLKAVVV 708
+ +++ P F VV+
Sbjct: 765 DTVDQNIQPDFSKYGLVVM 783
Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 78/168 (46%), Gaps = 50/168 (29%)
Query: 853 HQGLLRGKKILVVDDNGVNRMVAAGALKKFGATVECAASAKAALDKL-------QSP--- 902
+Q L G +IL+ +D V + VA L+K GATV + A+D L Q+P
Sbjct: 1037 NQKSLEGIRILLAEDTPVLQRVATIMLEKMGATVTAVWDGQQAVDSLNYKSINAQAPTEE 1096
Query: 903 ----------------------HCFDACFMDIQMPEMDGFEATRRIRQMESKANEQMMNG 940
+D MD QMP+MDG+EAT+ IR+ E
Sbjct: 1097 HKSFEEETANKVTTRETSLRNSSPYDLILMDCQMPKMDGYEATKAIRRAEI--------- 1147
Query: 941 GSSVDGTAKRDELHLPILAMTADVIHATFDECLKCGMDGYVSKPFEEE 988
GT ELH+PI+A+TA + + +CL+ GMD Y++KP + +
Sbjct: 1148 -----GT----ELHIPIVALTAHAMSSDEAKCLEVGMDAYLTKPIDRK 1186
>sp|Q3S4A7|AHK5_ARATH Histidine kinase 5 OS=Arabidopsis thaliana GN=AHK5 PE=2 SV=1
Length = 922
Score = 163 bits (413), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 113/335 (33%), Positives = 170/335 (50%), Gaps = 63/335 (18%)
Query: 384 QFLATVSHEIRTPMNGILGMLALLLDTDLSSTQRDYAQTAQICGKALIALINEVLDRAKI 443
Q LAT+SHEIR+P++G++GM +L T L QR G ++ LIN++LD +K+
Sbjct: 369 QMLATMSHEIRSPLSGVVGMAEILSTTKLDKEQRQLLNVMISSGDLVLQLINDILDLSKV 428
Query: 444 EARKLELEAVLFNLRAILDDVLSLFSEKSRNKGIELAVFVSDKVPEFVLGDPGRFRQIIT 503
E+ + LEA F R ++ VL + S K + L ++D VP V+GD R RQI+T
Sbjct: 429 ESGVMRLEATKFRPREVVKHVLQTAA-ASLKKSLTLEGNIADDVPIEVVGDVLRIRQILT 487
Query: 504 NLVGNSVKFTERGHIFVKVH-LAERTMVKTDAKDETLLNGGTEEGVCRSGTGQFNTLSGL 562
NL+ N++KFT G++ +K+ ++E + V+ +A LN TEE
Sbjct: 488 NLISNAIKFTHEGNVGIKLQVISEPSFVRDNA-----LNADTEE---------------- 526
Query: 563 EAADGRNSWDKFKHLIDAEGFQSNASIINMMASNGGSEDVTLMVC-VEDTGIGIPLSAQE 621
NG +E + C V DTGIGIP +A
Sbjct: 527 ------------------------------HEQNGLTETSVWICCDVWDTGIGIPENALP 556
Query: 622 RVFMPFMQADSSTSRHYGGTGIGLSISKCLVELMRGQISFVSRPQVGSTFSFTAVF--GK 679
+F +MQA + +R YGGTG+GL+I K LVELM GQ++ SR GSTF+F + G+
Sbjct: 557 CLFKKYMQASADHARKYGGTGLGLAICKQLVELMGGQLTVTSRVSEGSTFTFILPYKVGR 616
Query: 680 CKEYV-----FEDI--KQSKSEDLPPGFKGLKAVV 707
+Y F D+ +QS+ +D G+ K ++
Sbjct: 617 SDDYSDDQDEFSDMADQQSEPDDTAEGYFQFKPLL 651
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 80/145 (55%), Gaps = 9/145 (6%)
Query: 861 KILVVDDNGVNRMVAAGALKKFGATVECAASAKAALDKLQSPHCFDACFMDIQMPEMDGF 920
KIL+V+DN +N MVA +K+ G T++ A + A+ + S +D MD+ MP +DG
Sbjct: 779 KILLVEDNKINIMVAKSMMKQLGHTMDIANNGVEAITAINSS-SYDLVLMDVCMPVLDGL 837
Query: 921 EATRRIRQMESKAN-EQMMNGGSSVDGTAKRDEL------HLPILAMTADVIHATFDECL 973
+ATR IR E N + G + T++ +++ LPI+AMTA+ + + +EC
Sbjct: 838 KATRLIRSYEETGNWNAAIEAGVDI-STSENEQVCMRPTNRLPIIAMTANTLAESSEECY 896
Query: 974 KCGMDGYVSKPFEEENLYRELAKFF 998
GMD ++SKP + L L ++
Sbjct: 897 ANGMDSFISKPVTLQKLRECLQQYL 921
>sp|P0AEC5|BARA_ECOLI Signal transduction histidine-protein kinase BarA OS=Escherichia
coli (strain K12) GN=barA PE=1 SV=1
Length = 918
Score = 156 bits (395), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 157/302 (51%), Gaps = 70/302 (23%)
Query: 372 KVRAEAADVAKSQFLATVSHEIRTPMNGILGMLALLLDTDLSSTQRDYAQTAQICGKALI 431
K RA+ A KS+FLA +SHE+RTP+NG++G L L T+L+ TQRD+ T + L+
Sbjct: 283 KKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTIERSANNLL 342
Query: 432 ALINEVLDRAKIEARKLELEAVLFNLRAILDDVLSLFSEKSRNKGIELAVFVSDKVPEFV 491
A+IN+VLD +K+EA KL LE++ F LR+ LD+V++L + S +KG+EL + + VP+ V
Sbjct: 343 AIINDVLDFSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVPDNV 402
Query: 492 LGDPGRFRQIITNLVGNSVKFTERGHIFVKVHLAERTMVKTDAKDETLLNGGTEEGVCRS 551
+GDP R +QIITNLVGN++KFTE G+I + V +R + T + E +
Sbjct: 403 IGDPLRLQQIITNLVGNAIKFTENGNIDILVE--KRALSNTKVQIEVQIR---------- 450
Query: 552 GTGQFNTLSGLEAADGRNSWDKFKHLIDAEGFQSNASIINMMASNGGSEDVTLMVCVEDT 611
+T G+ D + F+ Q++ASI +GG T
Sbjct: 451 -----DTGIGIPERDQSRLFQAFR--------QADASISR---RHGG------------T 482
Query: 612 GIGIPLSAQERVFMPFMQADSSTSRHYGGTGIGLSISKCLVELMRGQISFVSRPQVGSTF 671
G+G L I++ LV M G ISF S+P GSTF
Sbjct: 483 GLG------------------------------LVITQKLVNEMGGDISFHSQPNRGSTF 512
Query: 672 SF 673
F
Sbjct: 513 WF 514
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 66/145 (45%), Gaps = 26/145 (17%)
Query: 862 ILVVDDNGVNRMVAAGALKKFGATVECAASAKAALDKL-QSPHCFDACFMDIQMPEMDGF 920
++ VDDN N + L+ VE S A+++ Q P FD MDIQMP+MDG
Sbjct: 670 VMAVDDNPANLKLIGALLEDMVQHVELCDSGHQAVERAKQMP--FDLILMDIQMPDMDGI 727
Query: 921 EATRRIRQMESKANEQMMNGGSSVDGTAKRDELHLPILAMTADVIHATFDECLKCGMDGY 980
A I Q+ + P++A+TA + ++ L GM Y
Sbjct: 728 RACELIHQLPHQQQT--------------------PVIAVTAHAMAGQKEKLLGAGMSDY 767
Query: 981 VSKPFEEENLYRELAKFFKSKPLSG 1005
++KP EEE L+ L ++ KP SG
Sbjct: 768 LAKPIEEERLHNLLLRY---KPGSG 789
>sp|P0AEC6|BARA_ECOL6 Signal transduction histidine-protein kinase BarA OS=Escherichia
coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=barA
PE=1 SV=1
Length = 918
Score = 156 bits (395), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 157/302 (51%), Gaps = 70/302 (23%)
Query: 372 KVRAEAADVAKSQFLATVSHEIRTPMNGILGMLALLLDTDLSSTQRDYAQTAQICGKALI 431
K RA+ A KS+FLA +SHE+RTP+NG++G L L T+L+ TQRD+ T + L+
Sbjct: 283 KKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTIERSANNLL 342
Query: 432 ALINEVLDRAKIEARKLELEAVLFNLRAILDDVLSLFSEKSRNKGIELAVFVSDKVPEFV 491
A+IN+VLD +K+EA KL LE++ F LR+ LD+V++L + S +KG+EL + + VP+ V
Sbjct: 343 AIINDVLDFSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVPDNV 402
Query: 492 LGDPGRFRQIITNLVGNSVKFTERGHIFVKVHLAERTMVKTDAKDETLLNGGTEEGVCRS 551
+GDP R +QIITNLVGN++KFTE G+I + V +R + T + E +
Sbjct: 403 IGDPLRLQQIITNLVGNAIKFTENGNIDILVE--KRALSNTKVQIEVQIR---------- 450
Query: 552 GTGQFNTLSGLEAADGRNSWDKFKHLIDAEGFQSNASIINMMASNGGSEDVTLMVCVEDT 611
+T G+ D + F+ Q++ASI +GG T
Sbjct: 451 -----DTGIGIPERDQSRLFQAFR--------QADASISR---RHGG------------T 482
Query: 612 GIGIPLSAQERVFMPFMQADSSTSRHYGGTGIGLSISKCLVELMRGQISFVSRPQVGSTF 671
G+G L I++ LV M G ISF S+P GSTF
Sbjct: 483 GLG------------------------------LVITQKLVNEMGGDISFHSQPNRGSTF 512
Query: 672 SF 673
F
Sbjct: 513 WF 514
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 66/145 (45%), Gaps = 26/145 (17%)
Query: 862 ILVVDDNGVNRMVAAGALKKFGATVECAASAKAALDKL-QSPHCFDACFMDIQMPEMDGF 920
++ VDDN N + L+ VE S A+++ Q P FD MDIQMP+MDG
Sbjct: 670 VMAVDDNPANLKLIGALLEDMVQHVELCDSGHQAVERAKQMP--FDLILMDIQMPDMDGI 727
Query: 921 EATRRIRQMESKANEQMMNGGSSVDGTAKRDELHLPILAMTADVIHATFDECLKCGMDGY 980
A I Q+ + P++A+TA + ++ L GM Y
Sbjct: 728 RACELIHQLPHQQQT--------------------PVIAVTAHAMAGQKEKLLGAGMSDY 767
Query: 981 VSKPFEEENLYRELAKFFKSKPLSG 1005
++KP EEE L+ L ++ KP SG
Sbjct: 768 LAKPIEEERLHNLLLRY---KPGSG 789
>sp|P0AEC7|BARA_ECO57 Signal transduction histidine-protein kinase BarA OS=Escherichia
coli O157:H7 GN=barA PE=3 SV=1
Length = 918
Score = 156 bits (395), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 157/302 (51%), Gaps = 70/302 (23%)
Query: 372 KVRAEAADVAKSQFLATVSHEIRTPMNGILGMLALLLDTDLSSTQRDYAQTAQICGKALI 431
K RA+ A KS+FLA +SHE+RTP+NG++G L L T+L+ TQRD+ T + L+
Sbjct: 283 KKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTIERSANNLL 342
Query: 432 ALINEVLDRAKIEARKLELEAVLFNLRAILDDVLSLFSEKSRNKGIELAVFVSDKVPEFV 491
A+IN+VLD +K+EA KL LE++ F LR+ LD+V++L + S +KG+EL + + VP+ V
Sbjct: 343 AIINDVLDFSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVPDNV 402
Query: 492 LGDPGRFRQIITNLVGNSVKFTERGHIFVKVHLAERTMVKTDAKDETLLNGGTEEGVCRS 551
+GDP R +QIITNLVGN++KFTE G+I + V +R + T + E +
Sbjct: 403 IGDPLRLQQIITNLVGNAIKFTENGNIDILVE--KRALSNTKVQIEVQIR---------- 450
Query: 552 GTGQFNTLSGLEAADGRNSWDKFKHLIDAEGFQSNASIINMMASNGGSEDVTLMVCVEDT 611
+T G+ D + F+ Q++ASI +GG T
Sbjct: 451 -----DTGIGIPERDQSRLFQAFR--------QADASISR---RHGG------------T 482
Query: 612 GIGIPLSAQERVFMPFMQADSSTSRHYGGTGIGLSISKCLVELMRGQISFVSRPQVGSTF 671
G+G L I++ LV M G ISF S+P GSTF
Sbjct: 483 GLG------------------------------LVITQKLVNEMGGDISFHSQPNRGSTF 512
Query: 672 SF 673
F
Sbjct: 513 WF 514
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 66/145 (45%), Gaps = 26/145 (17%)
Query: 862 ILVVDDNGVNRMVAAGALKKFGATVECAASAKAALDKL-QSPHCFDACFMDIQMPEMDGF 920
++ VDDN N + L+ VE S A+++ Q P FD MDIQMP+MDG
Sbjct: 670 VMAVDDNPANLKLIGALLEDMVQHVELCDSGHQAVERAKQMP--FDLILMDIQMPDMDGI 727
Query: 921 EATRRIRQMESKANEQMMNGGSSVDGTAKRDELHLPILAMTADVIHATFDECLKCGMDGY 980
A I Q+ + P++A+TA + ++ L GM Y
Sbjct: 728 RACELIHQLPHQQQT--------------------PVIAVTAHAMAGQKEKLLGAGMSDY 767
Query: 981 VSKPFEEENLYRELAKFFKSKPLSG 1005
++KP EEE L+ L ++ KP SG
Sbjct: 768 LAKPIEEERLHNLLLRY---KPGSG 789
>sp|P59342|BARA_SHIFL Signal transduction histidine-protein kinase BarA OS=Shigella
flexneri GN=barA PE=3 SV=1
Length = 918
Score = 156 bits (395), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 157/302 (51%), Gaps = 70/302 (23%)
Query: 372 KVRAEAADVAKSQFLATVSHEIRTPMNGILGMLALLLDTDLSSTQRDYAQTAQICGKALI 431
K RA+ A KS+FLA +SHE+RTP+NG++G L L T+L+ TQRD+ T + L+
Sbjct: 283 KKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTIERSANNLL 342
Query: 432 ALINEVLDRAKIEARKLELEAVLFNLRAILDDVLSLFSEKSRNKGIELAVFVSDKVPEFV 491
A+IN+VLD +K+EA KL LE++ F LR+ LD+V++L + S +KG+EL + + VP+ V
Sbjct: 343 AIINDVLDFSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVPDNV 402
Query: 492 LGDPGRFRQIITNLVGNSVKFTERGHIFVKVHLAERTMVKTDAKDETLLNGGTEEGVCRS 551
+GDP R +QIITNLVGN++KFTE G+I + V +R + T + E +
Sbjct: 403 IGDPLRLQQIITNLVGNAIKFTENGNIDILVE--KRALSNTKVQIEVQIR---------- 450
Query: 552 GTGQFNTLSGLEAADGRNSWDKFKHLIDAEGFQSNASIINMMASNGGSEDVTLMVCVEDT 611
+T G+ D + F+ Q++ASI +GG T
Sbjct: 451 -----DTGIGIPERDQSRLFQAFR--------QADASISR---RHGG------------T 482
Query: 612 GIGIPLSAQERVFMPFMQADSSTSRHYGGTGIGLSISKCLVELMRGQISFVSRPQVGSTF 671
G+G L I++ LV M G ISF S+P GSTF
Sbjct: 483 GLG------------------------------LVITQKLVNEMGGDISFHSQPNRGSTF 512
Query: 672 SF 673
F
Sbjct: 513 WF 514
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 66/145 (45%), Gaps = 26/145 (17%)
Query: 862 ILVVDDNGVNRMVAAGALKKFGATVECAASAKAALDKL-QSPHCFDACFMDIQMPEMDGF 920
++ VDDN N + L+ VE S A+++ Q P FD MDIQMP+MDG
Sbjct: 670 VMAVDDNPANLKLIGALLEDMVQHVELCDSGHQAVERAKQMP--FDLILMDIQMPDMDGI 727
Query: 921 EATRRIRQMESKANEQMMNGGSSVDGTAKRDELHLPILAMTADVIHATFDECLKCGMDGY 980
A I Q+ + P++A+TA + ++ L GM Y
Sbjct: 728 RACELIHQLPHQRQT--------------------PVIAVTAHAMAGQKEKLLGAGMSDY 767
Query: 981 VSKPFEEENLYRELAKFFKSKPLSG 1005
++KP EEE L+ L ++ KP SG
Sbjct: 768 LAKPIEEERLHNLLLRY---KPGSG 789
>sp|Q54YZ9|DHKJ_DICDI Hybrid signal transduction histidine kinase J OS=Dictyostelium
discoideum GN=dhkJ PE=3 SV=2
Length = 2062
Score = 154 bits (389), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/168 (47%), Positives = 111/168 (66%), Gaps = 9/168 (5%)
Query: 365 FHKMQELKVR-------AEAADVAKSQFLATVSHEIRTPMNGILGMLALLLDTDLSSTQR 417
H ++E ++ AEAA AKS F+A +SHEIRTPMNGI+GM L LDT+L++ QR
Sbjct: 1323 IHNLKETTLKNTLAKETAEAASRAKSDFMANMSHEIRTPMNGIIGMTDLTLDTELTAEQR 1382
Query: 418 DYAQTAQICGKALIALINEVLDRAKIEARKLELEAVLFNLRAILDDVLSLFSEKSRNKGI 477
+Y Q +L+ +IN++LD +KIEA +LEL+ F+LRA L D L S ++ K I
Sbjct: 1383 EYLSMVQSSAGSLLTIINDILDFSKIEAGRLELDQAEFSLRAHLYDALKTLSWRAHQKCI 1442
Query: 478 ELAVFVSDKVPEFVLGDPGRFRQIITNLVGNSVKFTERGHI--FVKVH 523
EL ++ VP+ ++GDPGR RQI+ NLVGN++KFT +G + VKV
Sbjct: 1443 ELVCDIASDVPDSLIGDPGRLRQIVNNLVGNAIKFTSQGEVDLVVKVE 1490
Score = 146 bits (368), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 121/402 (30%), Positives = 186/402 (46%), Gaps = 54/402 (13%)
Query: 601 DVTLMVCVEDTGIGIPLSAQERVFMPFMQADSSTSRHYGGTGIGLSISKCLVELMRGQIS 660
+V L V DTGIGIP +F F QAD S +R YGGTG+GL+IS LVELM+G++S
Sbjct: 1497 EVVLKFSVIDTGIGIPKDKLHLIFEAFSQADGSITRRYGGTGLGLTISTRLVELMKGKLS 1556
Query: 661 FVSRPQVGSTFSFTAVFGKCKEYVFEDIKQSKSEDLPPGFKGLKAVVVDEKPVRAAVTQY 720
VS+ GSTF FTA F + L + ++VD+ V +
Sbjct: 1557 VVSKSGKGSTFEFTAQFPTSPNQL----------PLTEKLNDVHTLIVDDNKSTLKVLKQ 1606
Query: 721 HLNRLGIMVKMSSSIKDASSTAKNGLTSSEDKFQP-DIILVEKDCWISGEDSGFNAQLLD 779
L+ GI ++S++ +DA N + + +P + I V D+ L+D
Sbjct: 1607 ILSEFGITSEVSNNTQDAF----NMIVKATKTTKPFEFIFV---------DAQLGTSLID 1653
Query: 780 W--KPNGHVFKLPKLILLATNISKDECDKAKAGGFADTVIMKPLRASMIAACL-QQVLST 836
+ N + K ++L++ + D + F + KP+ S I L +Q ++
Sbjct: 1654 MMVEKNMNHCKTKIIMLISGGGQRGYPDSSS--NFITGYLSKPVSPSEIFDILTRQGITR 1711
Query: 837 ENKRQAGRGVPNGSSFHQGLLRGKKILVVDDNGVNRMVAAGALKKFGATVECAASAKAAL 896
+ +Q + + S IL+ +DN VN+ +A L+KFG V+ A + A+
Sbjct: 1712 QIPKQLCKKIQLTSEIF------GDILLAEDNAVNQRLAIRLLEKFGHRVQLAENGLQAV 1765
Query: 897 DKLQSPHCFDACFMDIQMPEMDGFEATRRIRQMESKANEQMMNGGSSVDGTAKRDELHLP 956
Q FD MD+QMP GFEAT +IR+ E + +H P
Sbjct: 1766 ASSQ-LRKFDLILMDVQMPHCGGFEATAQIRKREHEQG------------------IHTP 1806
Query: 957 ILAMTADVIHATFDECLKCGMDGYVSKPFEEENLYRELAKFF 998
I+AMTA + +CL+ GMD Y+SKP + L + K+
Sbjct: 1807 IIAMTAHALARDRVKCLEAGMDDYISKPINPDQLKAMIEKYL 1848
>sp|Q9P896|TCSA_EMENI Two-component system protein A OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=tcsA
PE=3 SV=2
Length = 682
Score = 150 bits (380), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 117/367 (31%), Positives = 168/367 (45%), Gaps = 94/367 (25%)
Query: 322 RYHQKASTPW-TALTTAFFLFVIGLLVGYILYGAAIHIVKVEDDFHKMQELKVRAEAADV 380
RY + S W L T + F G VG+ VKV D + +E AEA +
Sbjct: 247 RYRRDGSRFWANVLITPIYQF--GQHVGF---------VKVTRDLTERKE----AEACMI 291
Query: 381 A--------KSQFLATVSHEIRTPMNGILGMLALLLDTDLSSTQRDYAQTAQICGKALIA 432
A K+ FLA +SHEIRTPMNG+ L +L DT LS QR++A Q L+
Sbjct: 292 AAFEESSRLKTDFLANISHEIRTPMNGMQIALTMLTDTGLSEEQREHANIVQDSMSLLLQ 351
Query: 433 LINEVLDRAKIEARKLELEAVLFNLRAILDDVLSLFSEKSRNKGIELAVFVSDKVPEFVL 492
++N+VLD +K+ + L A + ++R I+ V+ S +G+EL +S K+P +
Sbjct: 352 IVNDVLDYSKLSSGSFSLHADMLDIREIVGAVVR-NCRSSLQEGVELDTEISPKLPTRMR 410
Query: 493 GDPGRFRQIITNLVGNSVKFTERGHIFVKVHLAERTMVKTDAKDETLLNGGTEEGVCRSG 552
GDP R+RQ++ NLVGN+VKFTE+G I VK+ T + DE
Sbjct: 411 GDPLRYRQVLQNLVGNAVKFTEKGSIHVKI---------TSSTDEE-------------- 447
Query: 553 TGQFNTLSGLEAADGRNSWDKFKHLIDAEGFQSNASIINMMASNGGSEDVTLMVCVEDTG 612
S++S++ ++ G + V D+
Sbjct: 448 -------------------------------DSDSSVVRTEVTDTG-------IGVPDSA 469
Query: 613 IGIPLSAQERVFMPFMQADSSTSRHYGGTGIGLSISKCLVELMRGQISFVSRPQV-GSTF 671
I +F PF + +S +R Y GTG+GLSI K L ELM G + + P GS F
Sbjct: 470 INT-------LFTPFSRFANSAARKYQGTGLGLSICKSLAELMDGSVGYSPNPNASGSVF 522
Query: 672 SFTAVFG 678
FTA G
Sbjct: 523 WFTAKMG 529
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 24/141 (17%)
Query: 860 KKILVVDDNGVNRMVAAGALKKFG-ATVECAASAKAALDKL-QSPHCFDACFMDIQMPEM 917
K +L+V+DN VN V L G ++ A + A+ + Q P +D MD+ MP +
Sbjct: 562 KHVLLVEDNIVNHTVMLKLLHTIGFQRIDGAWNGAEAVRMVRQKPLSYDIILMDVSMPVL 621
Query: 918 DGFEATRRIRQMESKANEQMMNGGSSVDGTAKRDELHLPILAMTADVIHATFDECLKCGM 977
DG AT +IR M L +PI+A+T + + + + GM
Sbjct: 622 DGLAATEQIRDM----------------------GLTMPIIAITGNAMKGDAETYIAQGM 659
Query: 978 DGYVSKPFEEENLYRELAKFF 998
D + KP + L R L K+F
Sbjct: 660 DDCICKPVHRDQLLRVLWKWF 680
>sp|O14002|MAK2_SCHPO Peroxide stress-activated histidine kinase mak2
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=mak2 PE=3 SV=1
Length = 2310
Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 156/655 (23%), Positives = 273/655 (41%), Gaps = 109/655 (16%)
Query: 364 DFHKMQELKVRAEAADVAKSQFLATVSHEIRTPMNGILGMLALLLDTDLSSTQRDYAQTA 423
D + +E + A A K+ FLA +SHE+RTP + GML+LL DT L+ Q D TA
Sbjct: 1736 DINDEKEAREAAMHAVNLKTNFLANMSHELRTPFSSFYGMLSLLSDTKLNEEQYDIVSTA 1795
Query: 424 QICGKALIALINEVLDRAKIEARKLELEA-VLFNLRAILDDVLSLFSEKSRNKGIELAVF 482
+ +L+ +I+++L+ +++++ K++LE +F++ + D + L +K ++++
Sbjct: 1796 KQSCTSLVQIIDDLLNFSELKSGKMKLEPDKVFDVEENIADCIELVYPSLSSKPVQISYD 1855
Query: 483 VSDKVPEFVLGDPGRFRQIITNLVGNSVKFTERGHIFVKVHLAERTMVKTDAKDETLLNG 542
+ VP + GD + RQ+ITNL+GNSVKFT GHI +++ A DE +
Sbjct: 1856 IYPNVPALLAGDSAKLRQVITNLLGNSVKFTTEGHI----------LLRCMAIDEEI--- 1902
Query: 543 GTEEGVCRSGTGQFNTLSGLEAADGRNSWDKFKHLIDAEGFQSNASIINMMASNGGSEDV 602
EE C+ +T GL+ + ++ F Q + S + +G +
Sbjct: 1903 NAEENQCKLRFEIEDTGIGLKEEQLKLLFNPFT--------QVDGSTTRIYGGSGLGLSI 1954
Query: 603 TLMVC-VEDTGIGI-PLSAQERVFMPFMQADSSTSR---------HYGGTGIGLSISKCL 651
L +C + D IG+ + + F +Q + TS+ H I S+
Sbjct: 1955 CLQICKIMDGDIGVQSVYGEGSTFWFHVQLRNVTSKLSQKHFEESHERFANIRQSLKNAK 2014
Query: 652 VELMRGQISFVSRPQVGSTFSFTAVFGKCKEYVFEDIKQSKSEDL----PPGFKGLKAVV 707
+ +++ + SR S FS V ++ DI+Q + L P F ++A
Sbjct: 2015 ILVVKSFTT--SRSIFRSLFSLAVVDTTT---IYSDIEQQLIDSLDKRQPYDFLCIEAAS 2069
Query: 708 -VDEKPVRAAVTQYHLNRLGIMVKMSSSIKDASSTAKNGLTSSEDKFQPDIILVEKDCWI 766
E+ + ++ LN++ ++V + S + + + +S +K Q I + I
Sbjct: 2070 GQTEQIITQILSNQKLNKVLLIVLLPSIQRTKVRSDGDPFITSLNKNQSRIFCFREPIRI 2129
Query: 767 SGEDSGFNAQLLDWKPNGHVFKLPKLILLATNISKDECDKAKAGGFADTVIMKP--LRAS 824
S F A L W T +++P RAS
Sbjct: 2130 SKLLQNFPALLSKWS-------------------------------TPTKLVEPSQFRAS 2158
Query: 825 MIAACLQQVLSTENKRQAGRGVPNGSSFHQGLLRGKKILVVDDNGVNRMVAAGALKKFGA 884
VLS+E K +L+ K L+ +DN + R + L G
Sbjct: 2159 PRKVDQAVVLSSEEKE---------------ILQKKYALIAEDNLIARKLLTKQLSNLGF 2203
Query: 885 TVECAASAKAALDKLQSPH--CFDACFMDIQMPEMDGFEATRRIRQMESKANEQMMNGGS 942
V A + ++ + F D MP DG EA IR E + N
Sbjct: 2204 QVHAAVDGVELVKMYEAKQFGFYSVIFADYHMPIRDGAEAVMDIRAYERENNCST----- 2258
Query: 943 SVDGTAKRDELHLPILAMTADVIHATFDECLKCGMDGYVSKPFEEENLYRELAKF 997
+P++A+TAD+ + CL+ GM+ Y++KPF ++ L + +F
Sbjct: 2259 -----------PIPVIALTADIQKSAKQRCLEVGMNFYLTKPFTQKQLVNAVREF 2302
>sp|Q9XH57|ETR2_PELHO Ethylene receptor 2 OS=Pelargonium hortorum GN=ETR2 PE=2 SV=1
Length = 741
Score = 139 bits (349), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 170/364 (46%), Gaps = 59/364 (16%)
Query: 375 AEAADVAKSQFLATVSHEIRTPMNGILGMLALLLDTDLSSTQRDYAQTAQICGKALIALI 434
AE A A++ FLA ++HE+RTPM+ I+ + +LL +T+L+ QR +T L LI
Sbjct: 337 AETAIRARNDFLAVMNHEMRTPMHAIIALSSLLQETELTPEQRLMVETVLKSSNLLATLI 396
Query: 435 NEVLDRAKIEARKLELEAVLFNLRAILDDVLSLFSEKSRNKGIELAVFVSDKVPEFVLGD 494
N+VLD +++E L+L+ FNL A+L +V +L + K + +++ V+ +PE+ +GD
Sbjct: 397 NDVLDLSRLEDGSLQLDIGTFNLHALLREVHNLIKPIASVKKLCISLNVATDLPEYAVGD 456
Query: 495 PGRFRQIITNLVGNSVKFTERGHIFVKVHLAERTMVKTDAKDETLLNGGTEEGVCRSGTG 554
R QII N+VGN+VKF++ G+I + + AK E+L + + G
Sbjct: 457 EKRLVQIILNVVGNAVKFSKEGNISITAFV---------AKSESLRDPRAPDFFPICGEN 507
Query: 555 QFNTLSGLEAADGRNSWDKFKHLIDAEGFQSNASIINMMASNGGSEDVTLMVCVEDTGIG 614
QF L V V+D+G+G
Sbjct: 508 QF----------------------------------------------YLRVQVKDSGLG 521
Query: 615 IPLSAQERVFMPFMQADSSTSRHYGGTGIGLSISKCLVELMRGQISFVSR-PQVGSTFSF 673
I R+F F Q +++ GG+G+GL+I K V LM G I S P G T +F
Sbjct: 522 INPQDIPRLFTKFAQTQPVATKNSGGSGLGLAICKRFVNLMEGHIWIDSEGPGKGCTATF 581
Query: 674 TAVFG---KCKEYVFEDIKQSKSEDLPPGFKGLKAVVVDEKPVRAAVTQYHLNRLGIMVK 730
G + E + + + F GLK +++D+ V AVT+ L LG V
Sbjct: 582 VVKLGIPERSSEPKLLLMPKVPANHGQTNFSGLKVLLLDDNGVSRAVTRGLLAHLGCDVT 641
Query: 731 MSSS 734
SS
Sbjct: 642 TVSS 645
Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 70/145 (48%), Gaps = 20/145 (13%)
Query: 859 GKKILVVDDNGVNRMVAAGALKKFGATVECAASAKAALDKLQSPHCFDACFMDIQMPEMD 918
G K+L++DDNGV+R V G L G V +S+ L + + FMD+ MPE+D
Sbjct: 613 GLKVLLLDDNGVSRAVTRGLLAHLGCDVTTVSSSDELLRVVSQD--YKVVFMDVCMPEVD 670
Query: 919 GFEATRRIRQMESKANEQMMNGGSSVDGTAKRDELHLPILAMTADVIHATFDECLKCGMD 978
GFE RI +E+ M R E L I+A+T ++ T D C + GM+
Sbjct: 671 GFEIAVRI-------HEKFMT----------RHERPL-IVALTGNIDQVTKDNCTRVGME 712
Query: 979 GYVSKPFEEENLYRELAKFFKSKPL 1003
G V KP + + L+ + + L
Sbjct: 713 GVVLKPVSIDKMRNVLSNLLEHRVL 737
>sp|Q54Q69|DHKG_DICDI Hybrid signal transduction histidine kinase G OS=Dictyostelium
discoideum GN=dhkG PE=3 SV=1
Length = 3432
Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/314 (31%), Positives = 161/314 (51%), Gaps = 25/314 (7%)
Query: 372 KVRAEAADVAKSQFLATVSHEIRTPMNGILGMLALLLDTD--LSSTQRDYAQTAQICGKA 429
K AE A+ AKS F++ +SHE+RTP+N I+G + LL + +S Q++ + ++
Sbjct: 2475 KEEAEKANKAKSDFISNMSHEMRTPLNHIIGSIELLKSYNHLFNSDQKELLDISAKSSES 2534
Query: 430 LIALINEVLDRAKIEARKLELEAVLFNLRAILDDVLSLFSEKSRNKGIELAVFVS---DK 486
L+ ++N +LD +K+E K +L FNL + L+D + S + KG+ +A+F++ K
Sbjct: 2535 LLFMVNNILDLSKVEQGKTKLNLTNFNLVSFLEDSICAISPNAHLKGVYIALFINPCLSK 2594
Query: 487 VPEFVLGDPGRFRQIITNLVGNSVKFTERGHIFVKVHLAERTMVKTDAKDETLLNGGTEE 546
+P V+GD RQ+I NL+ N++KFTE G +++K++L+ T + L +
Sbjct: 2595 IP--VIGDINILRQVIVNLLTNAIKFTESGQVYIKLNLSINNNPTTTNNKKQLNTDNDGD 2652
Query: 547 GVCRSGTGQFNTLSGLEAADGRNSWDKFKHLIDAEGFQSNASIINMMASNGGSEDVTLMV 606
+ + + D D +I + +SN I + +
Sbjct: 2653 DDDDDDNENLDENNEDTSID----LDDNGKVIYQKNPKSNQCYI-------------VNI 2695
Query: 607 CVEDTGIGIPLSAQERVFMPFMQADSSTSRHYGGTGIGLSISKCLV-ELMRGQISFVSRP 665
V D+GIGI ++F F Q + ++R Y GTG+GLSI K LV LM+G I S+
Sbjct: 2696 EVVDSGIGIKNEDFGKLFQRFSQIECGSNRAYDGTGLGLSIVKDLVCNLMKGDIGVKSKV 2755
Query: 666 QVGSTFSFTAVFGK 679
VGSTF F GK
Sbjct: 2756 GVGSTFHFCVELGK 2769
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 63/132 (47%), Gaps = 22/132 (16%)
Query: 861 KILVVDDNGVNRMVAAGALKKFGATVE--CAASAKAALDKLQSPHCFDACFMDIQMPEMD 918
KIL+V+DN +N + L K G E A + + K ++ +D MDIQMP M
Sbjct: 3305 KILIVEDNEMNANIMFKMLAKLGIQCEPHLALNGLEGVKKAKNEE-YDLIIMDIQMPVMC 3363
Query: 919 GFEATRRIRQMESKANEQMMNGGSSVDGTAKRDELHLPILAMTADVIHATFDECLKCGMD 978
G AT IR+ E GT KR PI+A+TA ++ + L G D
Sbjct: 3364 GLTATSLIRKHE---------------GTKKRT----PIVAITASAMNGEMSKALAAGCD 3404
Query: 979 GYVSKPFEEENL 990
Y+SKP + ++L
Sbjct: 3405 DYLSKPLQLKDL 3416
>sp|Q54U87|DHKA_DICDI Hybrid signal transduction histidine kinase A OS=Dictyostelium
discoideum GN=dhkA PE=1 SV=1
Length = 2150
Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 116/176 (65%), Gaps = 2/176 (1%)
Query: 364 DFHKMQELKVRAEAADVAKSQFLATVSHEIRTPMNGILGMLALLLDTDLSSTQRDYAQTA 423
D ++ K AE A+ AKS F+ATVSHE+RTP++G++G+ LLL+T+LS QRDY QT
Sbjct: 1369 DMQRLILEKEAAEEANKAKSAFVATVSHEVRTPLSGVIGVSDLLLETNLSEEQRDYVQTI 1428
Query: 424 QICGKALIALINEVLDRAKIEARKLELEAVLFNLRAILDDVLSLFSEKSRNKGIELAVFV 483
Q +AL+ +IN++LD +K+E+R+L++E + F++ V+ + S + N +++ + V
Sbjct: 1429 QKSSQALLTIINDILDYSKLESRQLKMETLPFSIIETCQAVIHMLSVAA-NDDVDILLRV 1487
Query: 484 SDKVPEFVLGDPGRFRQIITNLVGNSVKFTERGHIFVKVHLAERTMVKTDAKDETL 539
VP + GD R RQ++ NL+ N++KFT RGH+ + + + ++ T+ ++E +
Sbjct: 1488 PPNVPRIIFGDAMRMRQVLLNLLSNAIKFTSRGHVLTDISVDD-SIPPTNTEEEII 1542
Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 70/138 (50%), Gaps = 17/138 (12%)
Query: 860 KKILVVDDNGVNRMVAAGALKKFGATVECAASAKAALDKLQSPHCFDACFMDIQMPEMDG 919
KK L+V+DN +NR V A KK T+ A + + AL ++ CFD FMD QMP +DG
Sbjct: 2025 KKALIVEDNELNRKVLAQLFKKIDWTISFAENGREALKEITGERCFDIVFMDCQMPVLDG 2084
Query: 920 FEATRRIRQMESKANEQMMNGGSSVDGTAKRDELHLPILAMTADVIHATFDECLKCGMDG 979
F+ T+ IR E + N + MN I+A++A + +CL GMD
Sbjct: 2085 FQTTKIIRSKERENNWKRMN-----------------IVALSAGSSSSFVQDCLDSGMDS 2127
Query: 980 YVSKPFEEENLYRELAKF 997
++ KP L LAK+
Sbjct: 2128 FMGKPITLATLKDALAKW 2145
Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 595 SNGGSEDVTLMVCVEDTGIGIPLSAQERVFMPFMQADSSTSRHYGGTGIGLSISKCLV-E 653
+N E + L + +EDTGIGIP S + +F PF QAD+ST+R YGGTG+GLSI+K L+ E
Sbjct: 1535 TNTEEEIIHLCITIEDTGIGIPQSLFDSIFEPFSQADNSTTRKYGGTGLGLSITKRLIEE 1594
Query: 654 LMRGQISFVSRPQVGSTF 671
+M G I S GS F
Sbjct: 1595 VMGGTIQVSSIVGQGSKF 1612
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 131/291 (45%), Gaps = 38/291 (13%)
Query: 34 RAWLPKALVLWIMGMAF-ISMSIYRGMDEENKIRRKEVLGSMCDQRARMLQDQFNVTVNH 92
RAW L L+I+G + I ++ EEN I + + R ML+ +FN +
Sbjct: 769 RAWA-IILGLFIVGSSISILATLVLRYSEENSI--ADDFARVARDRFTMLRIEFNNRLYI 825
Query: 93 VHALTILVSTFHYFKNPSALDQDTFAEYTTRTAFERPLLSGVAYAPRVVDAQREQFERQH 152
L++L+S F PS +D F ++ + L G+ +APRV + R +E +H
Sbjct: 826 TQTLSLLLSVF-----PST-SEDQFVPFSKLWSDNAEGLEGIMWAPRVSNLDRYTWEIEH 879
Query: 153 GMTITTMKSEP---SPIRD-------EYAPVMFYQEPMS---HVKSLDMMSGEEDRENIL 199
+ I + + P S +RD +Y P++F EP S H K ++ S R ++
Sbjct: 880 SVKIREIVTNPNNSSDMRDVPAAAASDYYPILF-SEPQSSNDHFKGYNIYSDMWRRPSLN 938
Query: 200 RARATGKAV-LTRPF--RL--LGSHHLGVVLTFPVYKSKLP---PRSTVEERIKATAGYI 251
+ R TG+ V + P+ +L + + VL + +Y++ STVE+R G+
Sbjct: 939 KTRDTGEKVSVASPYINKLANVPKNSRSNVLLY-IYQAVYTYGKVLSTVEDRRHEVIGFA 997
Query: 252 GGPFDVESLVENLLGQLAGNQAILVNVYDMTNASDP---LIMYGDQNQDGD 299
F + +V L +L ++ + V+D+ S P LI Y N D
Sbjct: 998 SCRFFISRMVSASLQRLTEEDSLDLYVFDLD--STPIGELIYYRASNAGND 1046
>sp|P48027|GACS_PSESY Sensor protein GacS OS=Pseudomonas syringae pv. syringae GN=gacS
PE=3 SV=1
Length = 907
Score = 134 bits (336), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 104/173 (60%), Gaps = 5/173 (2%)
Query: 356 IHIVKVEDDFHKMQELKVRAEAADVAKSQFLATVSHEIRTPMNGILGMLALLLDTDLSST 415
I I +E D + + L+ A KS+FLA +SHEIRTP+NGILG LL ++L+
Sbjct: 254 IEIQNIELDLARKEALE-----ASRIKSEFLANMSHEIRTPLNGILGFTHLLQKSELTPR 308
Query: 416 QRDYAQTAQICGKALIALINEVLDRAKIEARKLELEAVLFNLRAILDDVLSLFSEKSRNK 475
Q DY T + L+++INE+LD +KIEA KL L+ + FNLR +L D L++ + + K
Sbjct: 309 QFDYLGTIEKSADNLLSIINEILDFSKIEAGKLVLDNIPFNLRDLLQDTLTILAPAAHAK 368
Query: 476 GIELAVFVSDKVPEFVLGDPGRFRQIITNLVGNSVKFTERGHIFVKVHLAERT 528
+EL V P + GDP R RQI+TNLV N++KFT G I + L + T
Sbjct: 369 QLELVSLVYRDTPLALSGDPLRLRQILTNLVSNAIKFTREGTIVARAMLEDET 421
Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 114/411 (27%), Positives = 181/411 (44%), Gaps = 56/411 (13%)
Query: 593 MASNGGSEDVTLMVCVEDTGIGIPLSAQERVFMPFMQADSSTSRHYGGTGIGLSISKCLV 652
M + E L + V+DTGIG+ +F F QAD+S SR GGTG+GL ISK L+
Sbjct: 416 MLEDETEEHAQLRISVQDTGIGLSSQDVRALFQAFSQADNSLSRQPGGTGLGLVISKRLI 475
Query: 653 ELMRGQISFVSRPQVGSTFSFTAVFGKCKEYVFEDIKQSKSEDLPPGFKGLKAVVVDEKP 712
E M G+I S P GS F + K +E K E L GL+A V++
Sbjct: 476 EQMGGEIGVDSTPGEGSEFWISLKLPKARE--------DKEESLNIPLGGLRAAVLEHHD 527
Query: 713 VRAAVTQYHLNRLGIMVKMSSSIKDASSTAKNGLTSSEDKFQPDIILVEKDCWISGEDSG 772
+ ++ L G+ + +++++ NG+T++ + P I D + G +
Sbjct: 528 LARQALEHQLEDCGLQTIVFNNLEN----LLNGVTAAHET--PAAI----DLAVLGVTA- 576
Query: 773 FNAQLLDWKPN---GHVFKLPKL---ILLATNISKDECDKAKAGGFADTVIMKPLRASMI 826
L+ P H++ L L +++ ++ + + KP +
Sbjct: 577 -----LEISPERLRQHIWDLENLNCKVMVLCPTTEHALFQLAVHDVYTQLQAKPACTRKL 631
Query: 827 AACLQQVLSTENKRQAGRGVPNGSSFHQGLLRGKKILVVDDNGVNRMVAAGALKKFGATV 886
L ++++ R A G P S R ++L VDDN N ++ L+ GA V
Sbjct: 632 QKALSELIAPRAVR-ADIGPPLSS-------RAPRVLCVDDNPANLLLVQTLLEDMGAEV 683
Query: 887 ECAASAKAALDKLQSPHCFDACFMDIQMPEMDGFEATRRIRQMESKANEQMMNGGSSVDG 946
AA++ +Q FD MD+QMP MDG +AT IR E
Sbjct: 684 VAVEGGYAAVNAVQQ-EAFDLVLMDVQMPGMDGRQATEAIRAWE---------------- 726
Query: 947 TAKRDELHLPILAMTADVIHATFDECLKCGMDGYVSKPFEEENLYRELAKF 997
A+R++ LPI+A+TA + L+ GMD Y++KP E L + + K+
Sbjct: 727 -AERNQSSLPIVALTAHAMANEKRSLLQSGMDDYLTKPISERQLAQVVLKW 776
>sp|Q54YH4|DHKB_DICDI Hybrid signal transduction histidine kinase B OS=Dictyostelium
discoideum GN=dhkB PE=1 SV=1
Length = 1969
Score = 133 bits (335), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 106/167 (63%), Gaps = 4/167 (2%)
Query: 374 RAEAADVAKSQFLATVSHEIRTPMNGILGMLALLLDTDLSSTQRDYAQTAQICGKALIAL 433
+AEAA+ AK FL TVSHE+RTP+NG+L +L T L STQ+++ ++ G L+ L
Sbjct: 953 KAEAANEAKVIFLTTVSHELRTPINGVLASADILERTTLDSTQKEFLNCIKLSGNYLLDL 1012
Query: 434 INEVLDRAKIEARKLELEAVLFNLRAILDDVLSLFSEKSRNKGIELAVFVSDKVPEFVLG 493
IN++LD +KIEA K+E+ F++ +LD+ + + S+ KG++L +F+ VP V G
Sbjct: 1013 INDILDYSKIEAGKMEIIKYDFSILKMLDNSIRIVSKNIYEKGLDLCIFIDPNVPVIVNG 1072
Query: 494 DPGRFRQIITNLVGNSVKFTERGHIFVKVHL----AERTMVKTDAKD 536
D R +QI+ N + NS+KFT G I ++V L + +++K D +D
Sbjct: 1073 DQRRIKQILLNFLSNSIKFTNHGQIIIRVKLESDDSTHSLIKFDVED 1119
Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 76/137 (55%), Gaps = 10/137 (7%)
Query: 860 KKILVVDDNGVNRMVAAGALKKFGATVECAASAKAALDKLQSPHCFDACFMDIQMPEMDG 919
+KIL+V+DN VN + + LK G + A + A++ ++ +D MD QMPEMDG
Sbjct: 1839 EKILLVEDNFVNVKIFSKLLKDSGYIFDVAHNGVEAVECVKK-GAYDLILMDCQMPEMDG 1897
Query: 920 FEATRRIRQMESKANEQMMNGGSSVDGTAKRDELHLPILAMTADVIHATFDECLKCGMDG 979
FEAT IR++E K+N ++ + H+ I+A+TA+ + +CL GM+
Sbjct: 1898 FEATTAIRELE-KSN--------LIESPPSKKHSHVVIVALTANSGYKDKQKCLSVGMND 1948
Query: 980 YVSKPFEEENLYRELAK 996
++ KP + ++ ++ K
Sbjct: 1949 FLQKPIKTSDILIQMIK 1965
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 608 VEDTGIGIPLSAQERVFMPFMQADSSTSRHYGGTGIGLSISKCLVELMRGQISFVSRPQV 667
VED+GIGI ++F F Q DS SR Y GTG+GLSISK L ++M G + S V
Sbjct: 1117 VEDSGIGIKTEHLNQLFASFSQIDSGNSRKYQGTGLGLSISKRLCKMMGGDVKVKSEFGV 1176
Query: 668 GSTFSFTAVFGKCKE-------------YVFEDIKQSKSEDLPPGFK-----GLKAVVVD 709
GSTFSFT G Y+ EDI + + P G K G+ +V+D
Sbjct: 1177 GSTFSFTIPCGIPNTTTRFSLQSLGSAIYMGEDI---QGINKPIGKKKYGASGVVGIVID 1233
Query: 710 -EKPVRAAVTQY 720
K R +++QY
Sbjct: 1234 SNKYTRKSISQY 1245
>sp|Q86CZ2|DHKK_DICDI Hybrid signal transduction histidine kinase K OS=Dictyostelium
discoideum GN=dhkK PE=1 SV=1
Length = 1213
Score = 130 bits (327), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 61/147 (41%), Positives = 99/147 (67%), Gaps = 1/147 (0%)
Query: 381 AKSQFLATVSHEIRTPMNGILGMLALLLDT-DLSSTQRDYAQTAQICGKALIALINEVLD 439
A+ +FLAT+SHEIRTP+NG++GM LL D+ +L ++ A+ + CG L+ L+N++LD
Sbjct: 815 ARQEFLATMSHEIRTPLNGLIGMATLLRDSHNLPPEEKTMAKAVKSCGDILLRLVNDILD 874
Query: 440 RAKIEARKLELEAVLFNLRAILDDVLSLFSEKSRNKGIELAVFVSDKVPEFVLGDPGRFR 499
+K+EA ++ LE + F +R + + + S ++ K I L+ VSDK+P +LGD GR
Sbjct: 875 LSKLEANQMGLEHIPFRMRELTQQICHVLSGQANEKNIHLSCEVSDKIPSILLGDSGRIL 934
Query: 500 QIITNLVGNSVKFTERGHIFVKVHLAE 526
QI+ NL GN++KFT+ G++ + + L E
Sbjct: 935 QILMNLTGNALKFTQSGYVKIIIDLIE 961
Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 608 VEDTGIGIPLSAQERVFMPFMQADSSTSRHYGGTGIGLSISKCLVELMRGQISFVSRPQV 667
V+DTGIG+P+ + +++F F+QAD S SR YGG+G+GL + LV LM+G+I + P
Sbjct: 980 VKDTGIGVPVESHQKIFEAFVQADPSDSRKYGGSGLGLYLCAKLVRLMKGEIGVYNNPDC 1039
Query: 668 -GSTFSF 673
GSTF F
Sbjct: 1040 DGSTFWF 1046
Score = 70.5 bits (171), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 14/130 (10%)
Query: 861 KILVVDDNGVNRMVAAGALKKFGATVECAASAKAALDKLQSPHCFDACFMDIQMPEMDGF 920
K+L+ +DN +N+ VA L+K G E A + L+ L+ H +D FMD QMP +DG
Sbjct: 1076 KVLIAEDNIINQRVAVKFLEKIGIKAEVAGNGNEVLEILERQH-YDLIFMDFQMPILDGL 1134
Query: 921 EATRRIRQMESKANEQMMNGGSSVDGTAKRDELHLPILAMTADVIHATFDECLKCGMDGY 980
++ IR+ E + R + I +TA+ + C GM+ +
Sbjct: 1135 RCSKTIREFEQ-------------NHKWNRICPSIFICGLTANTMSTDKKRCFDHGMNHF 1181
Query: 981 VSKPFEEENL 990
+SKPF+ E L
Sbjct: 1182 ISKPFQLEQL 1191
>sp|Q9HUI3|ARUS_PSEAE Sensor histidine kinase AruS OS=Pseudomonas aeruginosa (strain ATCC
15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=aruS PE=3
SV=1
Length = 998
Score = 130 bits (326), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 72/169 (42%), Positives = 106/169 (62%)
Query: 360 KVEDDFHKMQELKVRAEAADVAKSQFLATVSHEIRTPMNGILGMLALLLDTDLSSTQRDY 419
+VE ++ K +AEAAD AKS+FLAT+SHEIRTP+NGILGM LL + L R
Sbjct: 485 QVERRTASLRRAKDQAEAADRAKSRFLATMSHEIRTPLNGILGMAELLREASLGERDRQR 544
Query: 420 AQTAQICGKALIALINEVLDRAKIEARKLELEAVLFNLRAILDDVLSLFSEKSRNKGIEL 479
+ G+ L+A++NEVL A++E EAV F+LR++L+DVL+L ++R L
Sbjct: 545 LRALATAGEGLLAILNEVLHFARLEEAPDVPEAVDFSLRSLLEDVLTLLEPRARENATRL 604
Query: 480 AVFVSDKVPEFVLGDPGRFRQIITNLVGNSVKFTERGHIFVKVHLAERT 528
+++ +V + G RQ++TNL+GN+VKFTE G + V+V R+
Sbjct: 605 DLWLDPQVHDGHRGAEQFLRQVLTNLLGNAVKFTEAGEVRVRVERLARS 653
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 73/145 (50%), Gaps = 14/145 (9%)
Query: 590 INMMASNGGSEDVTLMVCVEDTGIGIPLSAQERVFMPFMQADSSTSRHYGGTGIGLSISK 649
+ +A + GSE L + V D GIGIP +ER+F F Q + +R YGGTG+GL+ISK
Sbjct: 647 VERLARSAGSE--RLRLSVADDGIGIPEEMRERIFERFTQGGDAVTRRYGGTGLGLAISK 704
Query: 650 CLVELMRGQISFVSRPQVGSTFSFTAVFGKCKEYVFEDIKQSKSEDLPPG--FKGLKAVV 707
LVE + G+I SR GSTF F E S S PP L+ ++
Sbjct: 705 RLVEALGGRIGVESRVGQGSTFWFE----------IELALASLSGATPPAASVSALEVLL 754
Query: 708 VDEKPVRAAVTQYHLNRLGIMVKMS 732
V++ + V Q L R G V ++
Sbjct: 755 VEDVALNREVAQGLLERDGHRVMLA 779
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 59/142 (41%), Gaps = 19/142 (13%)
Query: 861 KILVVDDNGVNRMVAAGALKKFGATVECAASAKAALDKLQSPHCFDACFMDIQMPEMDGF 920
++L+V+D +NR VA G L++ G V A A AL L FD +D+ +P M G
Sbjct: 751 EVLLVEDVALNREVAQGLLERDGHRVMLAEDAGPAL-ALCRQRRFDLILLDMHLPGMAGL 809
Query: 921 EATRRIRQMESKANEQMMNGGSSVDGTAKRDELHLPILAMTADVIHATFDECLKCGMDGY 980
E IR+ +DG + PI A TA + GM G
Sbjct: 810 ELCAGIRR--------------QLDGLNR----ATPIFAFTASIQPDMVRRYFAAGMQGV 851
Query: 981 VSKPFEEENLYRELAKFFKSKP 1002
+ KP + L R L + S P
Sbjct: 852 LGKPLRMDELRRALGEVGTSVP 873
>sp|Q55E44|DHKE_DICDI Hybrid signal transduction histidine kinase E OS=Dictyostelium
discoideum GN=dhkE PE=3 SV=1
Length = 1699
Score = 130 bits (326), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 98/154 (63%)
Query: 374 RAEAADVAKSQFLATVSHEIRTPMNGILGMLALLLDTDLSSTQRDYAQTAQICGKALIAL 433
RAE + AK FL TVSHE+RTP+NGIL + +L + L TQRD+ + L+ L
Sbjct: 664 RAEELNQAKINFLTTVSHEVRTPINGILASVEILDGSQLDVTQRDFLSCIKQSADYLLDL 723
Query: 434 INEVLDRAKIEARKLELEAVLFNLRAILDDVLSLFSEKSRNKGIELAVFVSDKVPEFVLG 493
I ++LD +KIEA K EL+ V FNL +L++ +++ ++ +GIE+ F+ VP ++G
Sbjct: 724 ITDILDFSKIEAGKFELDRVEFNLITMLEESINIVYRTAQERGIEVLTFIDPDVPIILIG 783
Query: 494 DPGRFRQIITNLVGNSVKFTERGHIFVKVHLAER 527
DP R +Q + N + N++KFT +G + VKV + ++
Sbjct: 784 DPYRVKQCVLNFLSNAIKFTHKGQVMVKVSIVDQ 817
Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 68/135 (50%), Gaps = 17/135 (12%)
Query: 863 LVVDDNGVNRMVAAGALKKFGATVECAASAKAALDKLQSPHCFDACFMDIQMPEMDGFEA 922
L+VDD +NR V A L++ +V A + AL ++ S CFD FMD QMP +DGFE
Sbjct: 1577 LIVDDTELNRKVLAQLLRRMDWSVSFAENGIEALKEITSERCFDIIFMDCQMPILDGFET 1636
Query: 923 TRRIRQMESKANEQMMNGGSSVDGTAKRDELHLPILAMTADVIHATFDECLKCGMDGYVS 982
T+ +R E + N + +N I+A++AD + C CGM+GY+
Sbjct: 1637 TKLLRLRELENNWKPLN-----------------IVALSADSSSSFGQVCFDCGMNGYLG 1679
Query: 983 KPFEEENLYRELAKF 997
KP L L K+
Sbjct: 1680 KPITLITLKDTLLKW 1694
>sp|P0C0F6|RPFC_XANCP Sensory/regulatory protein RpfC OS=Xanthomonas campestris pv.
campestris (strain ATCC 33913 / NCPPB 528 / LMG 568)
GN=rpfC PE=1 SV=2
Length = 726
Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 117/202 (57%), Gaps = 9/202 (4%)
Query: 349 YILYGAAIHIVKVEDDFHKMQELKVRA--EA--ADVAKSQFLATVSHEIRTPMNGILGML 404
Y+ +G + ++ V F + RA EA A+ AKS+FLA +SHE RTP+NG+ GM
Sbjct: 152 YLSWGLLLGLIAVPLYFDSLLRAMTRAVREARHANQAKSRFLANMSHEFRTPLNGLSGMT 211
Query: 405 ALLLDTDLSSTQRDYAQTAQICGKALIALINEVLDRAKIEARKLELEAVLFNLRAILDDV 464
+L T L + Q++ T Q ++L++L+ EVLD + IEA K+ ++ F+LR ++ V
Sbjct: 212 EVLATTRLDAEQKECLNTIQASARSLLSLVEEVLDISAIEAGKIRIDRRDFSLREMIGSV 271
Query: 465 LSLFSEKSRNKGIELAVFVSDKVPEFVLGDPGRFRQIITNLVGNSVKFTERGHIFVKVHL 524
+ ++R + +E V+D VP+ + GD RQ++ NLVGN+VKFTE GH+ ++V
Sbjct: 272 NLILQPQARGRRLEYGTQVADDVPDLLKGDTAHLRQVLLNLVGNAVKFTEHGHVLLRV-- 329
Query: 525 AERTMVKTDAKDETLLNGGTEE 546
T V A+D L E+
Sbjct: 330 ---TRVSGSAEDAVRLRFDVED 348
Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 596 NGGSED-VTLMVCVEDTGIGIPLSAQERVFMPFMQADSSTSRHYGGTGIGLSISKCLVEL 654
+G +ED V L VEDTGIG+P+ + R+F F QAD SR Y GTG+G +I+K LVE
Sbjct: 333 SGSAEDAVRLRFDVEDTGIGVPMDMRPRLFEAFEQADVGLSRRYEGTGLGTTIAKGLVEA 392
Query: 655 MRGQISFVSRPQVGSTFSF 673
M G I F GS F F
Sbjct: 393 MGGSIGFKENQPSGSVFWF 411
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 83/186 (44%), Gaps = 21/186 (11%)
Query: 817 IMKPLRASMIAACLQQVLSTENKRQAGRGVPNGSSF--HQGLLRGKKILVVDDNGVNRMV 874
I +PL++S + ++ + ++ + + F H+ +R ++LV DD+ NRMV
Sbjct: 417 IGEPLKSSTVRVPTGALVDAPEELESSNIIAFSNPFLRHRARVRSMRMLVADDHEANRMV 476
Query: 875 AAGALKKFGATVECAASAKAALDKLQSPHCFDACFMDIQMPEMDGFEATRRIRQMESKAN 934
L+K G V C A+ LD + + +DA +D+ MP M+G + +++R M++
Sbjct: 477 LQRLLEKAGHKVLCVNGAEQVLDAM-AEEDYDAVIVDLHMPGMNGLDMLKQLRVMQASGM 535
Query: 935 EQMMNGGSSVDGTAKRDELHLPILAMTADVIHATFDECLKCGMDGYVSKPFEEENLYREL 994
+ P++ ++ADV C + G +++KP L L
Sbjct: 536 R------------------YTPVVVLSADVTPEAIRACEQAGARAFLAKPVVAAKLLDTL 577
Query: 995 AKFFKS 1000
A S
Sbjct: 578 ADLAVS 583
>sp|P0C0F7|RPFC_XANC8 Sensory/regulatory protein RpfC OS=Xanthomonas campestris pv.
campestris (strain 8004) GN=rpfC PE=3 SV=2
Length = 726
Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 117/202 (57%), Gaps = 9/202 (4%)
Query: 349 YILYGAAIHIVKVEDDFHKMQELKVRA--EA--ADVAKSQFLATVSHEIRTPMNGILGML 404
Y+ +G + ++ V F + RA EA A+ AKS+FLA +SHE RTP+NG+ GM
Sbjct: 152 YLSWGLLLGLIAVPLYFDSLLRAMTRAVREARHANQAKSRFLANMSHEFRTPLNGLSGMT 211
Query: 405 ALLLDTDLSSTQRDYAQTAQICGKALIALINEVLDRAKIEARKLELEAVLFNLRAILDDV 464
+L T L + Q++ T Q ++L++L+ EVLD + IEA K+ ++ F+LR ++ V
Sbjct: 212 EVLATTRLDAEQKECLNTIQASARSLLSLVEEVLDISAIEAGKIRIDRRDFSLREMIGSV 271
Query: 465 LSLFSEKSRNKGIELAVFVSDKVPEFVLGDPGRFRQIITNLVGNSVKFTERGHIFVKVHL 524
+ ++R + +E V+D VP+ + GD RQ++ NLVGN+VKFTE GH+ ++V
Sbjct: 272 NLILQPQARGRRLEYGTQVADDVPDLLKGDTAHLRQVLLNLVGNAVKFTEHGHVLLRV-- 329
Query: 525 AERTMVKTDAKDETLLNGGTEE 546
T V A+D L E+
Sbjct: 330 ---TRVSGSAEDAVRLRFDVED 348
Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 596 NGGSED-VTLMVCVEDTGIGIPLSAQERVFMPFMQADSSTSRHYGGTGIGLSISKCLVEL 654
+G +ED V L VEDTGIG+P+ + R+F F QAD SR Y GTG+G +I+K LVE
Sbjct: 333 SGSAEDAVRLRFDVEDTGIGVPMDMRPRLFEAFEQADVGLSRRYEGTGLGTTIAKGLVEA 392
Query: 655 MRGQISFVSRPQVGSTFSF 673
M G I F GS F F
Sbjct: 393 MGGSIGFKENQPSGSVFWF 411
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 83/186 (44%), Gaps = 21/186 (11%)
Query: 817 IMKPLRASMIAACLQQVLSTENKRQAGRGVPNGSSF--HQGLLRGKKILVVDDNGVNRMV 874
I +PL++S + ++ + ++ + + F H+ +R ++LV DD+ NRMV
Sbjct: 417 IGEPLKSSTVRVPTGALVDAPEELESSNIIAFSNPFLRHRARVRSMRMLVADDHEANRMV 476
Query: 875 AAGALKKFGATVECAASAKAALDKLQSPHCFDACFMDIQMPEMDGFEATRRIRQMESKAN 934
L+K G V C A+ LD + + +DA +D+ MP M+G + +++R M++
Sbjct: 477 LQRLLEKAGHKVLCVNGAEQVLDAM-AEEDYDAVIVDLHMPGMNGLDMLKQLRVMQASGM 535
Query: 935 EQMMNGGSSVDGTAKRDELHLPILAMTADVIHATFDECLKCGMDGYVSKPFEEENLYREL 994
+ P++ ++ADV C + G +++KP L L
Sbjct: 536 R------------------YTPVVVLSADVTPEAIRACEQAGARAFLAKPVLAAKLLDTL 577
Query: 995 AKFFKS 1000
A S
Sbjct: 578 ADLAVS 583
>sp|Q9P7Q7|MAK1_SCHPO Peroxide stress-activated histidine kinase mak1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=mak1 PE=3 SV=1
Length = 1639
Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 100/155 (64%)
Query: 367 KMQELKVRAEAADVAKSQFLATVSHEIRTPMNGILGMLALLLDTDLSSTQRDYAQTAQIC 426
K+QE + A+ +K Q+L+ +SHEIRTP+ GI GM++ LL+T +S+ Q YA+ Q
Sbjct: 979 KLQESNIEAQRIVRSKMQYLSNMSHEIRTPLIGITGMVSFLLETQMSAEQLSYARIIQQS 1038
Query: 427 GKALIALINEVLDRAKIEARKLELEAVLFNLRAILDDVLSLFSEKSRNKGIELAVFVSDK 486
K+L+ +IN++LD +K+ A ++L + F++RA+++D + +KGIEL V
Sbjct: 1039 AKSLLTVINDILDLSKVRAGMMKLTSQRFSVRAMMEDANETLGTLAFSKGIELNYTVDID 1098
Query: 487 VPEFVLGDPGRFRQIITNLVGNSVKFTERGHIFVK 521
VP+ V GD R RQ+ N++GN++KFT G +F +
Sbjct: 1099 VPDIVFGDNMRMRQVALNVIGNAIKFTNVGEVFTR 1133
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 607 CVEDTGIGIPLSAQERVFMPFMQADSSTSRHYGGTGIGLSISKCLVELMRGQISFVSRPQ 666
C+ DTG G Q ++F PF Q +SST +GG+G+GL ISK LVEL G +S SR
Sbjct: 1152 CI-DTGQGFNRDDQLQMFKPFSQVESSTLPRHGGSGLGLVISKELVELHNGSMSCQSRRG 1210
Query: 667 VGSTFSFTAVF 677
VG+ F +TA F
Sbjct: 1211 VGTRFMWTATF 1221
Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 62/134 (46%), Gaps = 19/134 (14%)
Query: 859 GKKILVVDDNGVNRMVAAGALKKFGATVECAASAKAALD--KLQSPHCFDACFMDIQMPE 916
G +L+ +DN +N V + L++ G + ++ K + P+ + MD+QMP
Sbjct: 1505 GFSVLLAEDNIINIKVISRYLERIGVKFKVTMDGLQCVEEWKREKPNFYSLILMDLQMPV 1564
Query: 917 MDGFEATRRIRQMESKANEQMMNGGSSVDGTAKRDELHLPILAMTADVIHATFDECLKCG 976
MDG++A IR+ E + D +PI+A++A+ + C G
Sbjct: 1565 MDGYQACNEIRKYE-----------------LENDYPKVPIVALSANALPHVVLSCKDSG 1607
Query: 977 MDGYVSKPFEEENL 990
D Y++KP ++L
Sbjct: 1608 FDSYLAKPITLQHL 1621
>sp|Q9P4U6|TCSB_EMENI Two-component system protein B OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=tcsB
PE=1 SV=2
Length = 1065
Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 158/364 (43%), Gaps = 73/364 (20%)
Query: 360 KVEDDFHKMQELKVRAEAADVAKSQFLATVSHEIRTPMNGILGMLALLL-DTDLSSTQRD 418
+V + ++++ K+ AE A+ +K+ F+A +SHE++TP+NGILGM A+ + + DL +R
Sbjct: 521 RVAERTRELEKAKIAAETANESKTLFIANISHELKTPLNGILGMCAVCMGEDDLPRIKRS 580
Query: 419 YAQTAQICG--KALIALINEVLDRAKIEARKLELEAVLFNLRAILDDVLSLFSEKSRNKG 476
QT G + R +I+ + + LE F L I + +F + + K
Sbjct: 581 L-QTVYKSGDLLLHLLNDLLTFSRNQID-QAIRLEEKEFKLSDIRSQLQIIFQNQVQEKQ 638
Query: 477 IELAVF--------------VSDKVPEFVLGDPG--------------RFRQIITNLVGN 508
I ++ V + P V G PG R QI+ NLVGN
Sbjct: 639 ISFSIKFCHPDTPPINDTPEVISRAPGPVYGPPGTAKLKDMVLWGDQHRILQILINLVGN 698
Query: 509 SVKFT-ERGHIFVKVHLAERTMVKTDAKDETLLNGGTEEGVCRSGTGQFNTLSGLEAADG 567
S+KFT E+G + +++ G E+ S + LS +
Sbjct: 699 SLKFTPEQGTVAIRIKCV-----------------GEEKNPSASPRPESRALSRWRSIGS 741
Query: 568 RNSWDKFKHLIDAEGFQSNASIINMMASNGGSEDVT---------LMVCVEDTGIGIPLS 618
++ + K +D +GG E+ T L VEDTG GIP
Sbjct: 742 SHASSRPKTSLD-------------RPRDGGDEETTRPPNLRTLILQFEVEDTGPGIPQH 788
Query: 619 AQERVFMPFMQADSSTSRHYGGTGIGLSISKCLVELMRGQISFVSRPQVGSTFSFTAVFG 678
Q RVF PF+Q D +R YGGTG+GLSI L LMRGQI S G+ F G
Sbjct: 789 LQNRVFEPFVQGDLRLNRKYGGTGLGLSICSQLARLMRGQIQLNSEQGRGTLFLVRIPLG 848
Query: 679 KCKE 682
KE
Sbjct: 849 FVKE 852
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 64/146 (43%), Gaps = 27/146 (18%)
Query: 857 LRGKKILVVDDNGVN-----RMVAAGALKKFGATVECAASAKAALDKLQSPHCFDACFMD 911
L+ + LV +DN VN RM+A + + + ++ FD FMD
Sbjct: 930 LKKIRALVAEDNVVNQEVVLRMLALEDVYDVTVVKDGQEAYDTVKANMEEGKVFDLIFMD 989
Query: 912 IQMPEMDGFEATRRIRQMESKANEQMMNGGSSVDGTAKRDELHLPILAMTADVIHATFDE 971
IQMP +DG E+TR IRQM A PI+A++A + +
Sbjct: 990 IQMPNLDGIESTRLIRQMGCSA----------------------PIVALSAFSEDSNIKD 1027
Query: 972 CLKCGMDGYVSKPFEEENLYRELAKF 997
C+ GMD ++SKP L + L +F
Sbjct: 1028 CMNSGMDMFISKPIRRPALKQVLRRF 1053
>sp|Q54RP6|DHKL_DICDI Hybrid signal transduction histidine kinase L OS=Dictyostelium
discoideum GN=dhkL PE=3 SV=1
Length = 1709
Score = 124 bits (310), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 106/173 (61%), Gaps = 5/173 (2%)
Query: 369 QELKVRAEAADVAKSQF-LATVSHEIRTPMNGILGMLALLLDTDLSSTQRDYAQTAQICG 427
+E K + + KS+ L+ +SH+IRTPM+ I+GM LLLDT LS Q Y + +
Sbjct: 817 EESKTLEQNKIIEKSRLRLSMMSHDIRTPMSNIIGMADLLLDTSLSQHQHHYLEIIKNSS 876
Query: 428 KALIALINEVLDRAKIEARKLELEAVLFNLRAILDDVLSLFSEKSRNKGIELAVFVSDKV 487
L+ +IN++LD +KIEA KL+++ F+ A + V+ +++ ++KG+EL +V K+
Sbjct: 877 NTLLTIINDILDISKIEAGKLDIDYESFDFNATVSQVVESMAQRVQSKGLELLSYVDPKI 936
Query: 488 PEFVLGDPGRFRQIITNLVGNSVKFTERGHIFVKVHLAERT----MVKTDAKD 536
P ++G R QI+TNL+GNS+KFT++G I + L + T +K D +D
Sbjct: 937 PNILIGPSSRLNQILTNLLGNSLKFTDKGEISICCLLNDETDSEYEIKVDVRD 989
Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 73/145 (50%), Gaps = 25/145 (17%)
Query: 861 KILVVDDNGVNRMVAAGALKKFGATVECAASAKAALDKLQ--SPHCFDACFMDIQMPEMD 918
K+LVVDDN +N + + L+ G V+ S AL K+ S +DA F+DIQMP+MD
Sbjct: 1570 KVLVVDDNHINIQILSKMLQTVGCEVDSVLSGADALAKINQSSGDSYDAIFLDIQMPDMD 1629
Query: 919 GFEATRRIRQMESKANEQMMNGGSSVDGTAKRDELHLP---ILAMTADVIHATFDECLKC 975
GF+ +R+IR+ E K LP I+A TA+V +C
Sbjct: 1630 GFQVSRKIREREKK--------------------FSLPRVAIIATTANVFKEDQLKCFDA 1669
Query: 976 GMDGYVSKPFEEENLYRELAKFFKS 1000
GMD ++SKP + + + K+ K+
Sbjct: 1670 GMDDFISKPIKRAEIKEIIKKYGKN 1694
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 604 LMVCVEDTGIGIPLSAQERVFMPFMQADSSTSRHYGGTGIGLSISKCLVEL-MRGQISFV 662
+ V V DTGIGI A +F F QA+ + +R YGG+G+GL+I K LV L G+IS
Sbjct: 983 IKVDVRDTGIGIKKEALPLLFKAFTQAEGTITRQYGGSGLGLAICKELVHLAFNGEISVE 1042
Query: 663 SRPQVGSTFSFTAVFGK 679
S+ GSTF+ F K
Sbjct: 1043 SQYGHGSTFTCILKFKK 1059
>sp|P49333|ETR1_ARATH Ethylene receptor 1 OS=Arabidopsis thaliana GN=ETR1 PE=1 SV=1
Length = 738
Score = 123 bits (309), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 130/469 (27%), Positives = 206/469 (43%), Gaps = 85/469 (18%)
Query: 375 AEAADVAKSQFLATVSHEIRTPMNGILGMLALLLDTDLSSTQRDYAQTAQICGKALIALI 434
AE A A++ FLA ++HE+RTPM+ I+ + +LL +T+L+ QR +T L L+
Sbjct: 337 AETAIRARNDFLAVMNHEMRTPMHAIIALSSLLQETELTPEQRLMVETILKSSNLLATLM 396
Query: 435 NEVLDRAKIEARKLELEAVLFNLRAILDDVLSLFSEKSRNKGIELAVFVSDKVPEFVLGD 494
N+VLD +++E L+LE FNL + +VL+L + K + + + ++ +PEFV+GD
Sbjct: 397 NDVLDLSRLEDGSLQLELGTFNLHTLFREVLNLIKPIAVVKKLPITLNLAPDLPEFVVGD 456
Query: 495 PGRFRQIITNLVGNSVKFTERGHIFVKVHLAERTMVKTDAKDETLLNGGTEEGVCRSGTG 554
R QII N+VGN+VKF+++G I V + K+D + + V +G+
Sbjct: 457 EKRLMQIILNIVGNAVKFSKQGSISVTA-----LVTKSDTR-------AADFFVVPTGSH 504
Query: 555 QFNTLSGLEAADGRNSWDKFKHLIDAEGFQSNASIINMMASNGGSEDVTLMVCVEDTGIG 614
+ + ++ G N D K QS A+ S+GGS
Sbjct: 505 FYLRVKVKDSGAGINPQDIPKIFTKFAQTQSLAT-----RSSGGS--------------- 544
Query: 615 IPLSAQERVFMPFMQADSSTSRHYGGTGIGLSISKCLVELMRGQISFVSRPQVGSTFSFT 674
G+GL+ISK V LM G I S G T
Sbjct: 545 ---------------------------GLGLAISKRFVNLMEGNIWIESD---GLGKGCT 574
Query: 675 AVFGKCKEYVFEDIKQSKSEDLP--------PGFKGLKAVVVDEKPVRAAVTQYHLNRLG 726
A+F K + E +SK +P F GLK +V+DE V VT+ G
Sbjct: 575 AIF-DVKLGISERSNESKQSGIPKVPAIPRHSNFTGLKVLVMDENGVSRMVTK------G 627
Query: 727 IMVKMSSSIKDASSTAKN-GLTSSEDKFQPDIILVEKDCWISGEDSGFNAQLLDWKPNGH 785
++V + + SS + + S E K +V D + G ++ A + K
Sbjct: 628 LLVHLGCEVTTVSSNEECLRVVSHEHK------VVFMDVCMPGVENYQIALRIHEKFTKQ 681
Query: 786 VFKLPKLILLATNISKDECDKAKAGGFADTVIMKPLRASMIAACLQQVL 834
+ P L+ L+ N K +K + G D V++KP+ I L +L
Sbjct: 682 RHQRPLLVALSGNTDKSTKEKCMSFGL-DGVLLKPVSLDNIRDVLSDLL 729
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 26/160 (16%)
Query: 845 GVPNGSSFHQGLLRGKKILVVDDNGVNRMVAAGALKKFGATVECAASAKAALDKLQSPHC 904
+P S+F G K+LV+D+NGV+RMV G L G V +S + L + H
Sbjct: 600 AIPRHSNF-----TGLKVLVMDENGVSRMVTKGLLVHLGCEVTTVSSNEECLRVVSHEH- 653
Query: 905 FDACFMDIQMPEMDGFEATRRIRQMESKANEQMMNGGSSVDGTAKRDELHLPIL-AMTAD 963
FMD+ MP ++ ++ RI + +K Q P+L A++ +
Sbjct: 654 -KVVFMDVCMPGVENYQIALRIHEKFTKQRHQR------------------PLLVALSGN 694
Query: 964 VIHATFDECLKCGMDGYVSKPFEEENLYRELAKFFKSKPL 1003
+T ++C+ G+DG + KP +N+ L+ + + L
Sbjct: 695 TDKSTKEKCMSFGLDGVLLKPVSLDNIRDVLSDLLEPRVL 734
>sp|P16575|BVGS_BORPE Virulence sensor protein BvgS OS=Bordetella pertussis (strain
Tohama I / ATCC BAA-589 / NCTC 13251) GN=bvgS PE=1 SV=3
Length = 1238
Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/183 (43%), Positives = 111/183 (60%), Gaps = 7/183 (3%)
Query: 343 IGLLVGYILYGAAIHIVKVEDDFHKMQELKVRAEAADVAKSQFLATVSHEIRTPMNGILG 402
+G L G I G I I + + K+ + K A+AA+ AK+ FLAT+SHEIRTPMN I+G
Sbjct: 683 LGELKGII--GGWIDITERAELLRKLHDAKESADAANRAKTTFLATMSHEIRTPMNAIIG 740
Query: 403 ML--ALLLDTDLSSTQRDYAQTAQICGKALIALINEVLDRAKIEARKLELEAVLFNLRAI 460
ML ALL TD R Q A ++L+ LI ++LD AKIEA K +L V LR +
Sbjct: 741 MLELALLRPTD-QEPDRQSIQVAYDSARSLLELIGDILDIAKIEAGKFDLAPVRTALRVL 799
Query: 461 LDDVLSLFSEKSRNKGIELAVFVSDKVP-EFVLGDPGRFRQIITNLVGNSVKFTERGHIF 519
+ + +F +R KGIEL V +D V + VL DP R +Q+++NLVGN++KFT G +
Sbjct: 800 PEGAIRVFDGLARQKGIEL-VLKTDIVGVDDVLIDPLRMKQVLSNLVGNAIKFTTEGQVV 858
Query: 520 VKV 522
+ V
Sbjct: 859 LAV 861
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 583 FQSNASIINMMASNGGSEDVTLMVCVEDTGIGIPLSAQERVFMPFMQ-ADSSTSRHYGGT 641
F + ++ + + + + V DTG GI + Q ++F PF Q S+ + GT
Sbjct: 851 FTTEGQVVLAVTARPDGDAAHVQFSVSDTGCGISEADQRQLFKPFSQVGGSAEAGPAPGT 910
Query: 642 GIGLSISKCLVELMRGQISFVSRPQVGSTFS 672
G+GLSIS+ LVELM G + S P VG+T S
Sbjct: 911 GLGLSISRRLVELMGGTLVMRSAPGVGTTVS 941
Score = 41.6 bits (96), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 861 KILVVDDNGVNRMVAAGALKKFGATVECAASAKAALDKLQSPHCFDACFMDIQMPEMDGF 920
++LVVDD+ N M+ L G V A S +AAL L H FD D MP + G+
Sbjct: 974 RVLVVDDHKPNLMLLRQQLDYLGQRVIAADSGEAAL-ALWREHAFDVVITDCNMPGISGY 1032
Query: 921 EA 922
E
Sbjct: 1033 EL 1034
>sp|P40330|BVGS_BORPA Virulence sensor protein BvgS OS=Bordetella parapertussis (strain
12822 / ATCC BAA-587 / NCTC 13253) GN=bvgS PE=3 SV=2
Length = 1238
Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/182 (43%), Positives = 110/182 (60%), Gaps = 5/182 (2%)
Query: 343 IGLLVGYILYGAAIHIVKVEDDFHKMQELKVRAEAADVAKSQFLATVSHEIRTPMNGILG 402
+G L G I G I I + + ++ + K A+AA+ AK+ FLAT+SHEIRTPMN I+G
Sbjct: 683 LGELKGII--GGWIDITERAELLRELHDAKESADAANRAKTTFLATMSHEIRTPMNAIIG 740
Query: 403 MLAL-LLDTDLSSTQRDYAQTAQICGKALIALINEVLDRAKIEARKLELEAVLFNLRAIL 461
ML L LL R Q A ++L+ LI ++LD AKIEA K +L V LRA+
Sbjct: 741 MLELALLRPADQEPDRQSIQVAYDSARSLLELIGDILDIAKIEAGKFDLAPVRTALRALP 800
Query: 462 DDVLSLFSEKSRNKGIELAVFVSDKVP-EFVLGDPGRFRQIITNLVGNSVKFTERGHIFV 520
+ + LF +R KGIEL V +D V + VL DP R +Q+++NLVGN++KFT G + +
Sbjct: 801 EGAIRLFDGLARQKGIEL-VLKTDIVGVDDVLIDPLRMKQVLSNLVGNAIKFTTEGQVVL 859
Query: 521 KV 522
V
Sbjct: 860 TV 861
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 583 FQSNASIINMMASNGGSEDVTLMVCVEDTGIGIPLSAQERVFMPFMQ-ADSSTSRHYGGT 641
F + ++ + + E + V DTG GI + Q ++F PF Q S+ + GT
Sbjct: 851 FTTEGQVVLTVTARPDGEAAHVQFSVSDTGCGISEADQRQLFKPFSQVGGSAEAGPAPGT 910
Query: 642 GIGLSISKCLVELMRGQISFVSRPQVGSTFS 672
G+GLSIS+ LVELM G + S P VG+T S
Sbjct: 911 GLGLSISRRLVELMGGTLVMRSAPGVGTTVS 941
Score = 42.0 bits (97), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 861 KILVVDDNGVNRMVAAGALKKFGATVECAASAKAALDKLQSPHCFDACFMDIQMPEMDGF 920
++LVVDD+ N M+ L G V A S +AAL L H FD D MP ++G+
Sbjct: 974 RVLVVDDHKPNLMLLRQQLDYLGQRVVAADSGEAAL-ALWHEHAFDVVITDCNMPGINGY 1032
Query: 921 EA 922
E
Sbjct: 1033 EL 1034
>sp|P39928|SLN1_YEAST Osmosensing histidine protein kinase SLN1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SLN1 PE=1 SV=1
Length = 1220
Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 177/410 (43%), Gaps = 69/410 (16%)
Query: 604 LMVCVEDTGIGIPLSAQERVFMPFMQADSSTSRHYGGTGIGLSISKCLVELMRGQISFVS 663
+ + VEDTG GI S QE VF PF+Q D + SR YGGTG+GLSI + L +M G + S
Sbjct: 853 ISIEVEDTGPGIDPSLQESVFHPFVQGDQTLSRQYGGTGLGLSICRQLANMMHGTMKLES 912
Query: 664 RPQVGSTFSFTAVFGKCKEYVFEDIKQSKSEDLPPGFKGLKAV------VVDEKPVRAAV 717
+ VGS F+FT + KE F D++ ++ P + + V + + ++V
Sbjct: 913 KVGVGSKFTFTLPLNQTKEISFADMEFPFEDEFNPESRKNRRVKFSVAKSIKSRQSTSSV 972
Query: 718 TQYHLNRLGIMVKMSSSIKDASSTAKNGLTSSEDKFQPDIILVEKDCWISGEDSGFNAQL 777
NR + + ++ G ++D P++ EK+ D+G QL
Sbjct: 973 ATPATNRSSLTNDVLPEVRSK------GKHETKDVGNPNMGREEKN------DNGGLEQL 1020
Query: 778 LDWKPNGHVFKLPKLILLATNISKDEC----DKAKAGGFADTVIMKPLRASMIAACLQQV 833
+ P + L +++ +++ G + +P S A
Sbjct: 1021 QEKNIK------PSICLTGAEVNEQNSLSSKHRSRHEGLGSVNLDRPFLQSTGTAT---- 1070
Query: 834 LSTENKRQAGRGVPNGSSFHQGLLRGKKILVVDDNGVNRMVAAGALKKFG-ATVECAASA 892
+ R +P + K ILVV+DN VN+ V L G +E A
Sbjct: 1071 --------SSRNIPTVKDDDKNETSVK-ILVVEDNHVNQEVIKRMLNLEGIENIELACDG 1121
Query: 893 KAALDKLQS----PHCFDACFMDIQMPEMDGFEATRRIRQMESKANEQMMNGGSSVDGTA 948
+ A DK++ ++ FMD+QMP++DG +T+ IR
Sbjct: 1122 QEAFDKVKELTSKGENYNMIFMDVQMPKVDGLLSTKMIR--------------------- 1160
Query: 949 KRDELHL-PILAMTADVIHATFDECLKCGMDGYVSKPFEEENLYRELAKF 997
RD + PI+A+TA + ECL+ GM+G++SKP + L L +F
Sbjct: 1161 -RDLGYTSPIVALTAFADDSNIKECLESGMNGFLSKPIKRPKLKTILTEF 1209
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 89/177 (50%), Gaps = 20/177 (11%)
Query: 382 KSQFLATVSHEIRTPMNGILGMLALLL-DTDLSSTQRDY------AQTAQICGKALIALI 434
K+ F+A +SHE+RTP+NGILGM A+ + +TD++ + + L+
Sbjct: 567 KTVFIANISHELRTPLNGILGMTAISMEETDVNKIRNSLKLIFRSGELLLHILTELLTFS 626
Query: 435 NEVLDRAKIEARKLELEAVLFNLRAILDDVLSLFSEKSRNKGIELAV-FVSDKVPEFVL- 492
VL R K+E R + V +++I F + ++++ + L++ + + VL
Sbjct: 627 KNVLQRTKLEKRDFCITDVALQIKSI-------FGKVAKDQRVRLSISLFPNLIRTMVLW 679
Query: 493 GDPGRFRQIITNLVGNSVKFTE-RGHIFVKVHLA---ERTMVKTDAKDETLLNGGTE 545
GD R QI+ NLV N++KFT G + V++ L ++ + + E + GTE
Sbjct: 680 GDSNRIIQIVMNLVSNALKFTPVDGTVDVRMKLLGEYDKELSEKKQYKEVYIKKGTE 736
>sp|O22267|CKI1_ARATH Histidine kinase CKI1 OS=Arabidopsis thaliana GN=CKI1 PE=1 SV=1
Length = 1122
Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 161/326 (49%), Gaps = 42/326 (12%)
Query: 374 RAEAADVAKSQFLATVSHEIRTPMNGILGMLALLLD-----TDLSSTQRDYAQTAQICGK 428
+AE + KSQ A SH+IR + G+ G++ + D +D+ +T +C K
Sbjct: 388 QAERKSMNKSQAFANASHDIRGALAGMKGLIDICRDGVKPGSDVDTT----LNQVNVCAK 443
Query: 429 ALIALINEVLDRAKIEARKLELEAVLFNLRAILDDVLSLFSEKSRNKGIELAVFVSD-KV 487
L+AL+N VLD +KIE+ K++L FNL +L+DV+ + + KG+++ + D V
Sbjct: 444 DLVALLNSVLDMSKIESGKMQLVEEDFNLSKLLEDVIDFYHPVAMKKGVDVVLDPHDGSV 503
Query: 488 PEF--VLGDPGRFRQIITNLVGNSVKFTERGHIFVKVHLAERTMVKTDAKDETLLNGGTE 545
+F V GD GR +QI+ NLV N+VKFT GHI V R + + +++
Sbjct: 504 FKFSNVRGDSGRLKQILNNLVSNAVKFTVDGHIAV------RAWAQRPGSNSSVVLASYP 557
Query: 546 EGVCRSGTGQFNTLSGLEAADGRNSWDKFKHLIDAEGFQSNASIINMMASNGGSEDVTLM 605
+GV + F K+ ++ +++ S N + +N + +
Sbjct: 558 KGVSKFVKSMF-----------------CKNKEESSTYETEIS--NSIRNNANTMEFVFE 598
Query: 606 VCVEDTGIGIPLSAQERVFMPFMQADSSTSRHYGGTGIGLSISKCLVELMRGQISFVSRP 665
V+DTG GIP+ ++ VF ++Q T++ + GTG+GL I + LV LM G+I +
Sbjct: 599 --VDDTGKGIPMEMRKSVFENYVQV-RETAQGHQGTGLGLGIVQSLVRLMGGEIRITDKA 655
Query: 666 --QVGSTFSFTAVFGKCKEYVFEDIK 689
+ G+ F F + + D+K
Sbjct: 656 MGEKGTCFQFNVLLTTLESPPVSDMK 681
Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 78/158 (49%), Gaps = 41/158 (25%)
Query: 856 LLRGKKILVVDDNGVNRMVAAGALKKFGAT-VECAASAKAAL----------------DK 898
LRGK++LVVDDN ++R VA G LKK G + VE S K AL DK
Sbjct: 982 FLRGKRVLVVDDNFISRKVATGKLKKMGVSEVEQCDSGKEALRLVTEGLTQREEQGSVDK 1041
Query: 899 LQSPHCFDACFMDIQMPEMDGFEATRRIRQMESKANEQMMNGGSSVDGTAKRDELHLPIL 958
L FD FMD QMPEMDG+EATR IR++E K + PI+
Sbjct: 1042 LP----FDYIFMDCQMPEMDGYEATREIRKVE------------------KSYGVRTPII 1079
Query: 959 AMTA-DVIHATFDECLKCGMDGYVSKPFEE-ENLYREL 994
A++ D E ++ GMD ++ K + N+ RE+
Sbjct: 1080 AVSGHDPGSEEARETIQAGMDAFLDKSLNQLANVIREI 1117
>sp|O49187|ETR2_SOLLC Ethylene receptor 2 OS=Solanum lycopersicum GN=ETR2 PE=2 SV=1
Length = 736
Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 158/359 (44%), Gaps = 65/359 (18%)
Query: 375 AEAADVAKSQFLATVSHEIRTPMNGILGMLALLLDTDLSSTQRDYAQTAQICGKALIALI 434
AE A A++ FL ++HE+RTPM+ ++ + +LL +++L QR +T L LI
Sbjct: 335 AETAVRARNDFLGVMNHEMRTPMHAVVALSSLLQESELIPEQRLMVETILKSSNLLATLI 394
Query: 435 NEVLDRAKIEARKLELEAVLFNLRAILDDVLSLFSEKSRNKGIELAVFVSDKVPEFVLGD 494
N+VLD +++E L+L+ FNL A+ +VL+L + K + + + +S PE +GD
Sbjct: 395 NDVLDLSRLEDGSLQLDVGTFNLHALFREVLNLIKPVAAVKKLFVTLSLSSDFPEVAIGD 454
Query: 495 PGRFRQIITNLVGNSVKFTERGHIFVKVHLAERTMVKTDAKDETLLNGGTEEGVCRSGTG 554
R QI+ N+VGN+VKF++ G + V +AK E+L++ E
Sbjct: 455 EKRLMQILLNVVGNAVKFSKEGSVSVS---------AVNAKSESLIDPRAPEFFPVQSEN 505
Query: 555 QFNTLSGLEAADGRNSWDKFKHLIDAEGFQSNASIINMMASNGGSEDVTLMVCVEDTGIG 614
F L V V+DTG G
Sbjct: 506 HF----------------------------------------------YLRVQVKDTGSG 519
Query: 615 IPLSAQERVFMPFMQADSSTSRHYGGTGIGLSISKCLVELMRGQISFVSRPQVGSTFSFT 674
I ++F F Q +++ GTG+GL+I K V LM G I ++ VG T
Sbjct: 520 INPQDFPKLFCKFAQNQEPATKNSAGTGLGLAICKRFVNLMEGHI-WIESEGVGK--GST 576
Query: 675 AVF-------GKCKEYVFEDIKQSKSEDLPPGFKGLKAVVVDEKPVRAAVTQYHLNRLG 726
A+F G+ E + + F+GLK +V+D+ VT+ L LG
Sbjct: 577 AIFIVKLGIPGRLNESKLPFTAGLPANHMQMTFQGLKVLVMDDNGFSRMVTKSLLVHLG 635
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 62/148 (41%), Gaps = 22/148 (14%)
Query: 837 ENKRQAGRGVPNGSSFHQGLLRGKKILVVDDNGVNRMVAAGALKKFGATVECAASAKAAL 896
E+K G+P ++ Q +G K+LV+DDNG +RMV L G V S L
Sbjct: 591 ESKLPFTAGLP--ANHMQMTFQGLKVLVMDDNGFSRMVTKSLLVHLGCDVTTIGSGDECL 648
Query: 897 DKLQSPHCFDACFMDIQMPEMDGFEATRRIRQMESKANEQMMNGGSSVDGTAKRDELHLP 956
L H MD + M+ ++ + + K E+ +
Sbjct: 649 RILTREH--KVLIMDASITGMNCYDVAVSVHEKFGKRLERPL------------------ 688
Query: 957 ILAMTADVIHATFDECLKCGMDGYVSKP 984
I+A+T + T + CL+ GMDG + KP
Sbjct: 689 IVALTGNTDQVTKENCLRVGMDGVILKP 716
>sp|P26762|BVGS_BORBR Virulence sensor protein BvgS OS=Bordetella bronchiseptica (strain
ATCC BAA-588 / NCTC 13252 / RB50) GN=bvgS PE=3 SV=2
Length = 1238
Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/182 (42%), Positives = 110/182 (60%), Gaps = 5/182 (2%)
Query: 343 IGLLVGYILYGAAIHIVKVEDDFHKMQELKVRAEAADVAKSQFLATVSHEIRTPMNGILG 402
+G L G I G I I + + ++ + K A+AA+ AK+ FLAT+SHEIRTPMN I+G
Sbjct: 683 LGELKGII--GGWIDITERAELLRELHDAKESADAANRAKTTFLATMSHEIRTPMNAIIG 740
Query: 403 MLAL-LLDTDLSSTQRDYAQTAQICGKALIALINEVLDRAKIEARKLELEAVLFNLRAIL 461
ML L LL R Q A ++L+ LI ++LD AKIEA K +L V LRA+
Sbjct: 741 MLELALLRPADQEPDRQSIQVAYDSARSLLELIGDILDIAKIEAGKFDLAPVRTALRALP 800
Query: 462 DDVLSLFSEKSRNKGIELAVFVSDKVP-EFVLGDPGRFRQIITNLVGNSVKFTERGHIFV 520
+ + +F +R KGIEL V +D V + VL DP R +Q+++NLVGN++KFT G + +
Sbjct: 801 EGAIRVFDGLARQKGIEL-VLKTDIVGVDDVLIDPLRMKQVLSNLVGNAIKFTTEGQVVL 859
Query: 521 KV 522
V
Sbjct: 860 TV 861
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 583 FQSNASIINMMASNGGSEDVTLMVCVEDTGIGIPLSAQERVFMPFMQ-ADSSTSRHYGGT 641
F + ++ + + E + V DTG GI + Q ++F PF Q S+ + GT
Sbjct: 851 FTTEGQVVLTVTARPDGEAAHVQFSVSDTGCGISEADQRQLFKPFSQVGGSAEAGPAPGT 910
Query: 642 GIGLSISKCLVELMRGQISFVSRPQVGSTFS 672
G+GLSIS+ LVELM G + S P VG+T S
Sbjct: 911 GLGLSISRRLVELMGGTLVMRSAPGVGTTVS 941
Score = 42.0 bits (97), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 861 KILVVDDNGVNRMVAAGALKKFGATVECAASAKAALDKLQSPHCFDACFMDIQMPEMDGF 920
++LVVDD+ N M+ L G V A S +AAL L H FD D MP ++G+
Sbjct: 974 RVLVVDDHKPNLMLLRQQLDYLGQRVVAADSGEAAL-ALWHEHAFDVVITDCNMPGINGY 1032
Query: 921 EA 922
E
Sbjct: 1033 EL 1034
>sp|Q551X9|DHKF_DICDI Hybrid signal transduction histidine kinase F OS=Dictyostelium
discoideum GN=dhkF PE=3 SV=1
Length = 1109
Score = 120 bits (302), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 100/163 (61%), Gaps = 1/163 (0%)
Query: 366 HKMQELKVRAEAADVAKSQFLATVSHEIRTPMNGILGMLALLLDTD-LSSTQRDYAQTAQ 424
++ E + A A KSQFLAT+SHEIRTP+NGI+ M +LL T L++ Q D A+T
Sbjct: 302 QELMEARDLALTATKIKSQFLATISHEIRTPLNGIITMGEMLLSTSPLNTEQHDIAETIF 361
Query: 425 ICGKALIALINEVLDRAKIEARKLELEAVLFNLRAILDDVLSLFSEKSRNKGIELAVFVS 484
+ L+++ +++LD +KIEA KLELE + F+ L+ + NK IE+A +
Sbjct: 362 GSSELLLSITSDILDFSKIEASKLELEMIEFDFIGCLEGIGKTIGVSITNKPIEIAFLMD 421
Query: 485 DKVPEFVLGDPGRFRQIITNLVGNSVKFTERGHIFVKVHLAER 527
+P ++GDP R QI+ N+ N+VK+T+RGHI ++ + R
Sbjct: 422 TDIPHRLIGDPNRLIQIMLNMGTNAVKYTDRGHIVFRISVISR 464
Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 604 LMVCVEDTGIGIPLSAQERVFMPFMQADSSTSRHYGGTGIGLSISKCLVELMRGQISFV- 662
+ + ++D+GIGI + +F PF Q DSS++R YGG+G+GL+IS L +LM G++
Sbjct: 471 IKISIDDSGIGIGEDQRAHLFEPFHQIDSSSTRKYGGSGLGLAISSKLAKLMGGEVILER 530
Query: 663 SRPQVGSTFSFTAVF 677
S+P VGS FS T F
Sbjct: 531 SKPGVGSLFSVTLNF 545
Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 72/145 (49%), Gaps = 17/145 (11%)
Query: 855 GLLRGKKILVVDDNGVNRMVAAGALKKFGATVECAASAKAALDKLQSPHCFDACFMDIQM 914
G+ +IL+VDDN VNR V LKK G + A + + +Q ++ FMD+ M
Sbjct: 922 GIRTRPRILLVDDNAVNRKVVKLQLKKLGYDCDTATNGFEGFE-MQKKDNYELIFMDLNM 980
Query: 915 PEMDGFEATRRIRQMESKANEQMMNGGSSVDGTAKRDELHLPILAMTADVIHATFDECLK 974
P DG A++ IR ++E++ N S + I+ ++A +H + D C+
Sbjct: 981 PLCDGSMASKLIR-----SHEELNNYKSRAN-----------IVGLSATYLHGSKDYCVS 1024
Query: 975 CGMDGYVSKPFEEENLYRELAKFFK 999
GMD +V KP + + L + K+ +
Sbjct: 1025 MGMDDFVVKPLKLQPLGELVKKYLE 1049
>sp|Q869S5|DOKA_DICDI Hybrid signal transduction protein dokA OS=Dictyostelium discoideum
GN=dokA PE=1 SV=1
Length = 1671
Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 111/181 (61%), Gaps = 4/181 (2%)
Query: 345 LLVGYILYGAAIHIVKVEDDFHKMQELKVRAEAADVAKSQFLATVSHEIRTPMNGILGML 404
L+ ++ G+ + D + ++ ++ A A K+QF+ +SHE+RTP +GI+GM
Sbjct: 1007 LITSAMIDGSTEQCITFVFDLSRYRQAEMAAIEATRLKTQFITNISHELRTPCHGIVGMS 1066
Query: 405 ALLLDTDLSSTQRDYAQTAQICGKALIALINEVLDRAKIEARKLELEAVLFNLRAILDDV 464
LLLD+ L++TQRD + + +LI+LIN++LD +K+E K+ LE F L ++++V
Sbjct: 1067 QLLLDSQLTNTQRDNIDSIKRSTDSLISLINDILDFSKLEYGKVTLENESFELLPMIEEV 1126
Query: 465 LSLFSEKSRNKGIELAVFVSDK---VPEFVLGDPGRFRQIITNLVGNSVKFTERGHIFVK 521
L + + KGI+L +FV + VP + GD ++++ NLVGN+VKFTE G + ++
Sbjct: 1127 LDSQATAANRKGIDL-IFVMGRDYPVPPVIFGDRNSLKKVLLNLVGNAVKFTETGFVLLE 1185
Query: 522 V 522
+
Sbjct: 1186 I 1186
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 71/142 (50%), Gaps = 25/142 (17%)
Query: 860 KKILVVDDNGVNRMVAAGALKKFGATVECAASAKAALDKLQS-PHCFDACFMDIQMPEMD 918
K ILV +DN +N V L+K G T + AL+ + S P C +D QMP+MD
Sbjct: 1518 KYILVAEDNDINIKVVVRQLEKLGYTAIVGINGLKALEIIGSFPICL--ILLDCQMPQMD 1575
Query: 919 GFEATRRIRQMESKANEQMMNGGSSVDGTAKRDELHLPILAMTADVIHATFDECLKCGMD 978
GF + +RQ+E T +R +PI+AMTA+ + D C + GMD
Sbjct: 1576 GFTCSTILRQIEP---------------TGQR----IPIIAMTAN---DSKDRCFEVGMD 1613
Query: 979 GYVSKPFEEENLYRELAKFFKS 1000
Y+SKP + L + L+ + K+
Sbjct: 1614 DYLSKPVRVDRLQKTLSDWIKT 1635
Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 49/77 (63%), Gaps = 3/77 (3%)
Query: 600 EDVTLMVCVEDTGIGIPLSAQERVFMPFMQADSSTSRHYGGTGIGLSISKCLVELMRGQI 659
+ ++L V+D+GIGIP + E++F+PF Q D S SR YGG+G+GLS K LV LM G I
Sbjct: 1194 DQISLRFTVKDSGIGIPENKIEQIFVPFGQIDGSFSRKYGGSGLGLSFCKELVALMGGYI 1253
Query: 660 SFVSRPQ---VGSTFSF 673
S Q G+TF F
Sbjct: 1254 RVESGDQEGGKGTTFWF 1270
>sp|P58356|TORS_ECO57 Sensor protein TorS OS=Escherichia coli O157:H7 GN=torS PE=3 SV=1
Length = 914
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 94/152 (61%), Gaps = 2/152 (1%)
Query: 372 KVRAEAADVAKSQFLATVSHEIRTPMNGILGMLALLLDTDLSSTQRDYAQTAQICGKALI 431
+ AE A AKS FLA +SHEIRTP+ GILG LL D + QRD + G++L+
Sbjct: 434 RAEAEKASQAKSAFLAAMSHEIRTPLYGILGTAQLLADNPALNAQRDDLRAITDSGESLL 493
Query: 432 ALINEVLDRAKIEA--RKLELEAVLFNLRAILDDVLSLFSEKSRNKGIELAVFVSDKVPE 489
++N++LD + IEA + + + F R +L+ L L S + + + I LA ++D VP
Sbjct: 494 TILNDILDYSAIEAGGKNVSVSDEPFEPRPLLESTLQLMSGRVKGRPIRLATAIADDVPT 553
Query: 490 FVLGDPGRFRQIITNLVGNSVKFTERGHIFVK 521
++GDP R RQ+ITNL+ N+++FT+ G I ++
Sbjct: 554 ALMGDPRRIRQVITNLLSNALRFTDEGQIVLR 585
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 68/141 (48%), Gaps = 10/141 (7%)
Query: 605 MVCVEDTGIGIPLSAQERVFMPFMQADSSTSRHYGGTGIGLSISKCLVELMRGQISFVSR 664
+V VED+G GI + +F PF+Q S GGTG+GL+IS L + M G++S S
Sbjct: 594 LVEVEDSGCGIDPAKLAEIFQPFIQ----VSGKRGGTGLGLTISSRLAQAMGGELSATST 649
Query: 665 PQVGSTFSFTAVFGKCKEYVFEDIKQSKSEDLPPGFKGLKAVVVDEKPVRAAVTQYHLNR 724
P+VGS F V + + Q+ D GL+ +++++ P+ +T LN
Sbjct: 650 PEVGSCFCLRLPLRVATAPVPKTVNQAVRLD------GLRLLLIEDNPLTQRITVEMLNT 703
Query: 725 LGIMVKMSSSIKDASSTAKNG 745
G V + A T +N
Sbjct: 704 SGAQVVAIGNAAQALETLQNS 724
>sp|P58363|ARCB_ECO57 Aerobic respiration control sensor protein ArcB OS=Escherichia coli
O157:H7 GN=arcB PE=3 SV=1
Length = 778
Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 120/471 (25%), Positives = 210/471 (44%), Gaps = 100/471 (21%)
Query: 376 EAADVAKSQFLATVSHEIRTPMNGILGMLALLLDTDLSSTQRDYAQTAQICGKALIALIN 435
E A K+ F++T+SHE+RTP+NGI+G+ +LLDT+L++ Q Y +T + L + N
Sbjct: 277 ERASRDKTTFISTISHELRTPLNGIVGLSRILLDTELTAEQEKYLKTIHVSAVTLGNIFN 336
Query: 436 EVLDRAKIEARKLELEAVLFNLRAILDDVLSLFSEKSRNKGIELAVFVSDKVPEFVLGDP 495
+++D K+E RK++L+ + + L D+ +L + +++ KG+ + + +P V+ D
Sbjct: 337 DIIDMDKMERRKVQLDNQPVDFTSFLADLENLSALQAQQKGLRFNLEPTLPLPHQVITDG 396
Query: 496 GRFRQIITNLVGNSVKFTERGHIFVKVHLAERTMVKTDAKDETLLNGGTEEGVCRSGTGQ 555
R RQI+ NL+ N+VKFT++G + V+V E M+ + +D SG G
Sbjct: 397 TRLRQILWNLISNAVKFTQQGQVTVRVRYDEGDMLHFEVED--------------SGIGI 442
Query: 556 FNTLSGLEAADGRNSWDKFKHLIDAEGFQSNASIINMMASNGGSEDVTLMVCVEDTGIGI 615
++ DK A + S+GG TG GI
Sbjct: 443 -----------PQDELDKI-----------FAMYYQVKDSHGGK---------PATGTGI 471
Query: 616 PLSAQERVFMPFMQADSSTSRHYGGTGIGLSISKCLVELMRGQISFVSRPQVGSTFSFTA 675
L+ R+ +++ GG I+ S GSTF+ T
Sbjct: 472 GLAVSRRL-----------AKNMGG-----------------DITVTSEQGKGSTFTLTI 503
Query: 676 VFGKCKEYVFEDIKQSKSEDLPPGFKGLKAVVVDEKPVRAAVTQYHLNRLGIMVKMSSSI 735
V E++ + ED P L ++V++ + V + L +LG V
Sbjct: 504 ----HAPSVAEEVDDAFDEDDMP-LPALNVLLVEDIELNVIVARSVLEKLGNSV------ 552
Query: 736 KDASSTAKNGLTSSEDKFQP---DIILVEKDCW-ISGEDSGFNAQLLDWKPNGHVFKLPK 791
D + T K L + F+P D++L++ ++G D + +L P LP
Sbjct: 553 -DVAMTGKAAL----EMFKPGEYDLVLLDIQLPDMTGLD--ISRELTKRYPRED---LPP 602
Query: 792 LILLATNISKDECDKAKAGGFADTVIMKPLRASMIAACLQQVLSTENKRQA 842
L+ L N+ KD+ + AG D V+ KPL + A +++ T++ ++
Sbjct: 603 LVALTANVLKDKQEYLNAG--MDDVLSKPLSVPALTAMIKKFWDTQDDEES 651
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 73/140 (52%), Gaps = 21/140 (15%)
Query: 862 ILVVDDNGVNRMVAAGALKKFGATVECAASAKAALDKLQSPHCFDACFMDIQMPEMDGFE 921
+L+V+D +N +VA L+K G +V+ A + KAAL+ + P +D +DIQ+P+M G +
Sbjct: 528 VLLVEDIELNVIVARSVLEKLGNSVDVAMTGKAALEMFK-PGEYDLVLLDIQLPDMTGLD 586
Query: 922 ATRRIRQMESKANEQMMNGGSSVDGTAKRDELHLPILAMTADVIHATFDECLKCGMDGYV 981
+R + + R++L P++A+TA+V+ E L GMD +
Sbjct: 587 ISRELTK------------------RYPREDLP-PLVALTANVLKDK-QEYLNAGMDDVL 626
Query: 982 SKPFEEENLYRELAKFFKSK 1001
SKP L + KF+ ++
Sbjct: 627 SKPLSVPALTAMIKKFWDTQ 646
>sp|P0AEC4|ARCB_SHIFL Aerobic respiration control sensor protein ArcB OS=Shigella
flexneri GN=arcB PE=3 SV=1
Length = 778
Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 120/471 (25%), Positives = 210/471 (44%), Gaps = 100/471 (21%)
Query: 376 EAADVAKSQFLATVSHEIRTPMNGILGMLALLLDTDLSSTQRDYAQTAQICGKALIALIN 435
E A K+ F++T+SHE+RTP+NGI+G+ +LLDT+L++ Q Y +T + L + N
Sbjct: 277 ERASRDKTTFISTISHELRTPLNGIVGLSRILLDTELTAEQEKYLKTIHVSAVTLGNIFN 336
Query: 436 EVLDRAKIEARKLELEAVLFNLRAILDDVLSLFSEKSRNKGIELAVFVSDKVPEFVLGDP 495
+++D K+E RK++L+ + + L D+ +L + +++ KG+ + + +P V+ D
Sbjct: 337 DIIDMDKMERRKVQLDNQPVDFTSFLADLENLSALQAQQKGLRFNLEPTLPLPHQVITDG 396
Query: 496 GRFRQIITNLVGNSVKFTERGHIFVKVHLAERTMVKTDAKDETLLNGGTEEGVCRSGTGQ 555
R RQI+ NL+ N+VKFT++G + V+V E M+ + +D SG G
Sbjct: 397 TRLRQILWNLISNAVKFTQQGQVTVRVRYDEGDMLHFEVED--------------SGIGI 442
Query: 556 FNTLSGLEAADGRNSWDKFKHLIDAEGFQSNASIINMMASNGGSEDVTLMVCVEDTGIGI 615
++ DK A + S+GG TG GI
Sbjct: 443 -----------PQDELDKI-----------FAMYYQVKDSHGGK---------PATGTGI 471
Query: 616 PLSAQERVFMPFMQADSSTSRHYGGTGIGLSISKCLVELMRGQISFVSRPQVGSTFSFTA 675
L+ R+ +++ GG I+ S GSTF+ T
Sbjct: 472 GLAVSRRL-----------AKNMGG-----------------DITVTSEQGKGSTFTLTI 503
Query: 676 VFGKCKEYVFEDIKQSKSEDLPPGFKGLKAVVVDEKPVRAAVTQYHLNRLGIMVKMSSSI 735
V E++ + ED P L ++V++ + V + L +LG V
Sbjct: 504 ----HAPSVAEEVDDAFDEDDMP-LPALNVLLVEDIELNVIVARSVLEKLGNSV------ 552
Query: 736 KDASSTAKNGLTSSEDKFQP---DIILVEKDCW-ISGEDSGFNAQLLDWKPNGHVFKLPK 791
D + T K L + F+P D++L++ ++G D + +L P LP
Sbjct: 553 -DVAMTGKAAL----EMFKPGEYDLVLLDIQLPDMTGLD--ISRELTKRYPRED---LPP 602
Query: 792 LILLATNISKDECDKAKAGGFADTVIMKPLRASMIAACLQQVLSTENKRQA 842
L+ L N+ KD+ + AG D V+ KPL + A +++ T++ ++
Sbjct: 603 LVALTANVLKDKQEYLNAG--MDDVLSKPLSVPALTAMIKKFWDTQDDEES 651
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 73/140 (52%), Gaps = 21/140 (15%)
Query: 862 ILVVDDNGVNRMVAAGALKKFGATVECAASAKAALDKLQSPHCFDACFMDIQMPEMDGFE 921
+L+V+D +N +VA L+K G +V+ A + KAAL+ + P +D +DIQ+P+M G +
Sbjct: 528 VLLVEDIELNVIVARSVLEKLGNSVDVAMTGKAALEMFK-PGEYDLVLLDIQLPDMTGLD 586
Query: 922 ATRRIRQMESKANEQMMNGGSSVDGTAKRDELHLPILAMTADVIHATFDECLKCGMDGYV 981
+R + + R++L P++A+TA+V+ E L GMD +
Sbjct: 587 ISRELTK------------------RYPREDLP-PLVALTANVLKDK-QEYLNAGMDDVL 626
Query: 982 SKPFEEENLYRELAKFFKSK 1001
SKP L + KF+ ++
Sbjct: 627 SKPLSVPALTAMIKKFWDTQ 646
>sp|P0AEC3|ARCB_ECOLI Aerobic respiration control sensor protein ArcB OS=Escherichia coli
(strain K12) GN=arcB PE=1 SV=1
Length = 778
Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 120/471 (25%), Positives = 210/471 (44%), Gaps = 100/471 (21%)
Query: 376 EAADVAKSQFLATVSHEIRTPMNGILGMLALLLDTDLSSTQRDYAQTAQICGKALIALIN 435
E A K+ F++T+SHE+RTP+NGI+G+ +LLDT+L++ Q Y +T + L + N
Sbjct: 277 ERASRDKTTFISTISHELRTPLNGIVGLSRILLDTELTAEQEKYLKTIHVSAVTLGNIFN 336
Query: 436 EVLDRAKIEARKLELEAVLFNLRAILDDVLSLFSEKSRNKGIELAVFVSDKVPEFVLGDP 495
+++D K+E RK++L+ + + L D+ +L + +++ KG+ + + +P V+ D
Sbjct: 337 DIIDMDKMERRKVQLDNQPVDFTSFLADLENLSALQAQQKGLRFNLEPTLPLPHQVITDG 396
Query: 496 GRFRQIITNLVGNSVKFTERGHIFVKVHLAERTMVKTDAKDETLLNGGTEEGVCRSGTGQ 555
R RQI+ NL+ N+VKFT++G + V+V E M+ + +D SG G
Sbjct: 397 TRLRQILWNLISNAVKFTQQGQVTVRVRYDEGDMLHFEVED--------------SGIGI 442
Query: 556 FNTLSGLEAADGRNSWDKFKHLIDAEGFQSNASIINMMASNGGSEDVTLMVCVEDTGIGI 615
++ DK A + S+GG TG GI
Sbjct: 443 -----------PQDELDKI-----------FAMYYQVKDSHGGK---------PATGTGI 471
Query: 616 PLSAQERVFMPFMQADSSTSRHYGGTGIGLSISKCLVELMRGQISFVSRPQVGSTFSFTA 675
L+ R+ +++ GG I+ S GSTF+ T
Sbjct: 472 GLAVSRRL-----------AKNMGG-----------------DITVTSEQGKGSTFTLTI 503
Query: 676 VFGKCKEYVFEDIKQSKSEDLPPGFKGLKAVVVDEKPVRAAVTQYHLNRLGIMVKMSSSI 735
V E++ + ED P L ++V++ + V + L +LG V
Sbjct: 504 ----HAPSVAEEVDDAFDEDDMP-LPALNVLLVEDIELNVIVARSVLEKLGNSV------ 552
Query: 736 KDASSTAKNGLTSSEDKFQP---DIILVEKDCW-ISGEDSGFNAQLLDWKPNGHVFKLPK 791
D + T K L + F+P D++L++ ++G D + +L P LP
Sbjct: 553 -DVAMTGKAAL----EMFKPGEYDLVLLDIQLPDMTGLD--ISRELTKRYPRED---LPP 602
Query: 792 LILLATNISKDECDKAKAGGFADTVIMKPLRASMIAACLQQVLSTENKRQA 842
L+ L N+ KD+ + AG D V+ KPL + A +++ T++ ++
Sbjct: 603 LVALTANVLKDKQEYLNAG--MDDVLSKPLSVPALTAMIKKFWDTQDDEES 651
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 73/140 (52%), Gaps = 21/140 (15%)
Query: 862 ILVVDDNGVNRMVAAGALKKFGATVECAASAKAALDKLQSPHCFDACFMDIQMPEMDGFE 921
+L+V+D +N +VA L+K G +V+ A + KAAL+ + P +D +DIQ+P+M G +
Sbjct: 528 VLLVEDIELNVIVARSVLEKLGNSVDVAMTGKAALEMFK-PGEYDLVLLDIQLPDMTGLD 586
Query: 922 ATRRIRQMESKANEQMMNGGSSVDGTAKRDELHLPILAMTADVIHATFDECLKCGMDGYV 981
+R + + R++L P++A+TA+V+ E L GMD +
Sbjct: 587 ISRELTK------------------RYPREDLP-PLVALTANVLKDK-QEYLNAGMDDVL 626
Query: 982 SKPFEEENLYRELAKFFKSK 1001
SKP L + KF+ ++
Sbjct: 627 SKPLSVPALTAMIKKFWDTQ 646
>sp|P39453|TORS_ECOLI Sensor protein TorS OS=Escherichia coli (strain K12) GN=torS PE=1
SV=4
Length = 914
Score = 116 bits (291), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 95/152 (62%), Gaps = 2/152 (1%)
Query: 372 KVRAEAADVAKSQFLATVSHEIRTPMNGILGMLALLLDTDLSSTQRDYAQTAQICGKALI 431
+ AE A AKS FLA +SHEIRTP+ GILG LL D + QRD + G++L+
Sbjct: 434 RAEAEKASQAKSAFLAAMSHEIRTPLYGILGTAQLLADNPALNAQRDDLRAITDSGESLL 493
Query: 432 ALINEVLDRAKIEA--RKLELEAVLFNLRAILDDVLSLFSEKSRNKGIELAVFVSDKVPE 489
++N++LD + IEA + + + F R +L+ L L S + + + I LA ++D +P
Sbjct: 494 TILNDILDYSAIEAGGKNVSVSDEPFEPRPLLESTLQLMSGRVKGRPIRLATAIADDMPC 553
Query: 490 FVLGDPGRFRQIITNLVGNSVKFTERGHIFVK 521
++GDP R RQ+ITNL+ N+++FT+ G+I ++
Sbjct: 554 ALMGDPRRIRQVITNLLSNALRFTDEGYIILR 585
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 10/141 (7%)
Query: 605 MVCVEDTGIGIPLSAQERVFMPFMQADSSTSRHYGGTGIGLSISKCLVELMRGQISFVSR 664
+V VED+G GI + +F PF+Q S GGTG+GL+IS L + M G++S S
Sbjct: 594 LVEVEDSGCGIDPAKLAEIFQPFVQ----VSGKRGGTGLGLTISSRLAQAMGGELSATST 649
Query: 665 PQVGSTFSFTAVFGKCKEYVFEDIKQSKSEDLPPGFKGLKAVVVDEKPVRAAVTQYHLNR 724
P+VGS F V + + Q+ D GL+ +++++ P+ +T L
Sbjct: 650 PEVGSCFCLRLPLRVATAPVPKTVNQAVRLD------GLRLLLIEDNPLTQRITIEMLKT 703
Query: 725 LGIMVKMSSSIKDASSTAKNG 745
G + + A T +N
Sbjct: 704 SGAQIVAVGNAAQALETLQNS 724
Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 60/143 (41%), Gaps = 22/143 (15%)
Query: 857 LRGKKILVVDDNGVNRMVAAGALKKFGATVECAASAKAALDKLQSPHCFDACFMDIQMPE 916
L G ++L+++DN + + + LK GA + +A AL+ LQ+ F A +D +P+
Sbjct: 679 LDGLRLLLIEDNPLTQRITIEMLKTSGAQIVAVGNAAQALETLQNSEPFAAALVDFDLPD 738
Query: 917 MDGFEATRRIRQMESKANEQMMNGGSSVDGTAKRDELHLPILAMTADVIHATFDECLKCG 976
+DG R++ Q L ++ +A VI T +
Sbjct: 739 IDGITLARQLAQQYPS----------------------LVLIGFSAHVIDETLRQRTSSL 776
Query: 977 MDGYVSKPFEEENLYRELAKFFK 999
G + KP E L + LA + +
Sbjct: 777 FRGIIPKPVPREVLGQLLAHYLQ 799
>sp|Q9XH58|ETR1_PELHO Ethylene receptor 1 OS=Pelargonium hortorum GN=ETR1 PE=2 SV=1
Length = 740
Score = 116 bits (291), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 121/471 (25%), Positives = 202/471 (42%), Gaps = 86/471 (18%)
Query: 375 AEAADVAKSQFLATVSHEIRTPMNGILGMLALLLDTDLSSTQRDYAQTAQICGKALIALI 434
AE A A++ FLA ++HE+RTPM+ I+ + +LL +TDL+S QR +T L LI
Sbjct: 337 AETAIRARNDFLAVMNHEMRTPMHAIIALSSLLQETDLTSEQRLMVETILKSSNLLATLI 396
Query: 435 NEVLDRAKIEARKLELEAVLFNLRAILDDVLSLFSEKSRNKGIELAVFVSDKVPEFVLGD 494
N+VLD +++E L+L+ FNL A+ V +L + K + + + VS +PE+V+GD
Sbjct: 397 NDVLDLSRLEDGSLQLDIATFNLHAVFRQVFNLIKPIASVKKLFITLNVSPDLPEYVIGD 456
Query: 495 PGRFRQIITNLVGNSVKFTERGHIFVKVHLAERTMVKTDAKDETLLNGGTEEGVCRSGTG 554
R QI+ N+VGN+VKF++ G I V + AK E++ + + S
Sbjct: 457 EKRLVQIMLNVVGNAVKFSKEGIISVTAFV---------AKSESVRDPRAPDFFPVSSDN 507
Query: 555 QFNTLSGL-EAADGRNSWDKFKHLIDAEGFQSNASIINMMASNGGSEDVTLMVCVEDTGI 613
QF + ++ G N D K Q A+ ++GGS G+
Sbjct: 508 QFYMRVQVKDSGSGINPQDMPKLFTKFAQSQPVAT-----KNSGGS------------GL 550
Query: 614 GIPLSAQERVFMPFMQADSSTSRHYGGTGIGLSISKCLVELMRGQISFVSR-PQVGSTFS 672
G+ +ISK V LM G I S P G T +
Sbjct: 551 GL------------------------------AISKRFVNLMDGHIWIDSEGPSKGCTVT 580
Query: 673 FTAVFG---KCKEYVFEDIKQSKSEDLPPGFKGLKAVVVDEKPVRAAVTQYHLNRLGIMV 729
F G E + + + + F GLK +++DE + VT+ G+++
Sbjct: 581 FVVKLGIPEGSNEPKLPLMPKVSANNSQTDFPGLKVLLMDENGISRMVTK------GLLM 634
Query: 730 KMSSSIKDASSTAKNGLTSSEDKFQPDIILVEKDCWISGEDSGFNAQLLDWKPNGHVFK- 788
+ + SS+ + S+D K ++ G + L + + K
Sbjct: 635 HLGCDVTSVSSSEECLRMVSQD---------HKVVFMDVRVPGLDGHELAVRIHEKFMKR 685
Query: 789 --LPKLILLATN---ISKDECDKAKAGGFADTVIMKPLRASMIAACLQQVL 834
P ++ L +N ++K+ C + G VI+KP+ + L ++L
Sbjct: 686 HERPLIVALTSNADKVTKENCLRVGMEG----VILKPVSVDKMRNVLSKLL 732
Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 74/145 (51%), Gaps = 20/145 (13%)
Query: 859 GKKILVVDDNGVNRMVAAGALKKFGATVECAASAKAALDKLQSPHCFDACFMDIQMPEMD 918
G K+L++D+NG++RMV G L G V +S++ L + H FMD+++P +D
Sbjct: 613 GLKVLLMDENGISRMVTKGLLMHLGCDVTSVSSSEECLRMVSQDH--KVVFMDVRVPGLD 670
Query: 919 GFEATRRIRQMESKANEQMMNGGSSVDGTAKRDELHLPILAMTADVIHATFDECLKCGMD 978
G E RI +E+ M KR E L I+A+T++ T + CL+ GM+
Sbjct: 671 GHELAVRI-------HEKFM----------KRHERPL-IVALTSNADKVTKENCLRVGME 712
Query: 979 GYVSKPFEEENLYRELAKFFKSKPL 1003
G + KP + + L+K + + L
Sbjct: 713 GVILKPVSVDKMRNVLSKLLEHRIL 737
>sp|O49230|ETR1_BRAOL Ethylene receptor 1 OS=Brassica oleracea GN=ETR1 PE=2 SV=1
Length = 735
Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/365 (30%), Positives = 167/365 (45%), Gaps = 67/365 (18%)
Query: 375 AEAADVAKSQFLATVSHEIRTPMNGILGMLALLLDTDLSSTQRDYAQTAQICGKALIALI 434
AE A A++ FLA ++HE+RTPM+ I+ + +LL +T+L+ QR +T L L+
Sbjct: 337 AETAIRARNDFLAVMNHEMRTPMHAIIALSSLLQETELTPEQRLMVETVLKSSSLLATLM 396
Query: 435 NEVLDRAKIEARKLELEAVLFNLRAILDDVLSLFSEKSRNKGIELAVFVSDKVPEFVLGD 494
N+VLD +++E L+LE FNL + +VL+L + K + + + ++ +PEFV+GD
Sbjct: 397 NDVLDLSRLEDGSLQLELGTFNLHTLFREVLNLIKPIAVVKKLPITLNLAPDLPEFVVGD 456
Query: 495 PGRFRQIITNLVGNSVKFTERGHIFVKVHLAERTMVKTDAKDETLLNGGTEEGVCRSGTG 554
R QII N+VGN+VKF+++G I V + K+D + + V +G+
Sbjct: 457 EKRLMQIILNIVGNAVKFSKQGSISVTA-----LVTKSDNR------APPDFFVVPTGSH 505
Query: 555 QFNTLSGLEAADGRNSWDKFKHLIDAEGFQSNASIINMMASNGGSEDVTLMVCVEDTGIG 614
+ + + G N D K QS A+ S+GGS G+G
Sbjct: 506 FYLRVKVKDLGAGINPQDIPKLFTKFAQTQSLAT-----RSSGGS------------GLG 548
Query: 615 IPLSAQERVFMPFMQADSSTSRHYGGTGIGLSISKCLVELMRGQISFVSRPQVGSTFSFT 674
L+ISK V LM G I ++ VG T
Sbjct: 549 ------------------------------LAISKRFVNLMEGNI-WIESEGVGK--GCT 575
Query: 675 AVFGKCKEYVFEDIKQSKSEDLPP-----GFKGLKAVVVDEKPVRAAVTQYHLNRLGIMV 729
A+F K + + KQS +P F GLK +V+DE V VT+ L LG V
Sbjct: 576 AIFD-VKLAISNESKQSGIPKVPANPQHVNFAGLKVLVMDENGVSRMVTKGLLVHLGCEV 634
Query: 730 KMSSS 734
SS
Sbjct: 635 TTVSS 639
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 83/174 (47%), Gaps = 24/174 (13%)
Query: 834 LSTENKRQAGRGVPNGSSFHQGL-LRGKKILVVDDNGVNRMVAAGALKKFGATVECAASA 892
+S E+K+ G+P + Q + G K+LV+D+NGV+RMV G L G V +S
Sbjct: 584 ISNESKQS---GIPKVPANPQHVNFAGLKVLVMDENGVSRMVTKGLLVHLGCEVTTVSSN 640
Query: 893 KAALDKLQSPHCFDACFMDIQMPEMDGFEATRRIRQMESKANEQMMNGGSSVDGTAKRDE 952
+ L + H FMD+ P ++ ++ RI + +K +++ +
Sbjct: 641 EECLRVVSHEH--RVVFMDVCTPGVENYQIALRIHEKFTKRHQRPL-------------- 684
Query: 953 LHLPILAMTADVIHATFDECLKCGMDGYVSKPFEEENLYRELAKFFKSKPLSGA 1006
++A+T + +T ++C+ G+DG + KP +N+ L+ + + L A
Sbjct: 685 ----LVALTGNTDKSTKEKCMSFGLDGVLLKPVSLDNMRNVLSDRLEHRVLYEA 734
>sp|Q41342|ETR1_SOLLC Ethylene receptor 1 OS=Solanum lycopersicum GN=ETR1 PE=1 SV=1
Length = 754
Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 125/474 (26%), Positives = 202/474 (42%), Gaps = 92/474 (19%)
Query: 375 AEAADVAKSQFLATVSHEIRTPMNGILGMLALLLDTDLSSTQRDYAQTAQICGKALIALI 434
AE A A++ FLA ++HE+RTPM+ I+ + +LL +TDL+ QR +T L LI
Sbjct: 351 AEMAVRARNDFLAVMNHEMRTPMHAIIALSSLLQETDLTPEQRLMVETILKSSNLLATLI 410
Query: 435 NEVLDRAKIEARKLELEAVLFNLRAILDDVLSLFSEKSRNKGIELAVFVSDKVPEFVLGD 494
N+VLD +++E L+L+ FNL A+ +V SL + K + + + +S +PE+V+GD
Sbjct: 411 NDVLDLSRLEDGSLQLDIGTFNLHALFREVHSLIKPIASVKKLFVTLSLSSDLPEYVIGD 470
Query: 495 PGRFRQIITNLVGNSVKFTERGHIFVKVHLAERTMVKTDAKDETLLNGGTEEGVCRSGTG 554
R QI+ N+VGN+VKF++ G++ + + AK ++L + E
Sbjct: 471 EKRLMQILLNVVGNAVKFSKEGNVSISAFV---------AKSDSLRDPRAPEFFAVPSEN 521
Query: 555 QF-------NTLSGLEAADGRNSWDKFKHLIDAEGFQSNASIINMMASNGGSEDVTLMVC 607
F +T G+ D N + KF QS A + +N G
Sbjct: 522 HFYLRVQIKDTGIGITPQDIPNLFSKFT--------QSQA----LATTNSG--------- 560
Query: 608 VEDTGIGIPLSAQERVFMPFMQADSSTSRHYGGTGIGLSISKCLVELMRGQISFVSRPQ- 666
G G +GL+I K V LM G I S
Sbjct: 561 ----GTG----------------------------LGLAICKRFVNLMEGHIWIESEGLG 588
Query: 667 VGSTFSFT---AVFGKCKEYVFEDIKQSKSEDLPPGFKGLKAVVVDEKPVRAAVTQYHLN 723
GST F + G+ E + + + F+GLK +V+DE V VT+ L
Sbjct: 589 KGSTAIFIIKLGIPGRANESKLPFVTKLPANHTQMSFQGLKVLVMDENGVSRMVTKGLLT 648
Query: 724 RLGIMVKMSSSIKDASSTAKNGLTSSEDKFQPDIILVEKDCWISGEDSGFNAQLLDWKPN 783
LG V S + + + E K +V D + G D + ++ +
Sbjct: 649 HLGCDVTTVGSRDECLR-----VVTHEHK------VVIMDVSMQGIDC-YEVAVVIHERF 696
Query: 784 GHVFKLPKLILLATN---ISKDECDKAKAGGFADTVIMKPLRASMIAACLQQVL 834
G P ++ L N ++K+ C + G VI+KP+ + + L ++L
Sbjct: 697 GKRHGRPLIVALTGNTDRVTKENCMRVGMDG----VILKPVSVYKMRSVLSELL 746
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 61/142 (42%), Gaps = 20/142 (14%)
Query: 858 RGKKILVVDDNGVNRMVAAGALKKFGATVECAASAKAALDKLQSPHCFDACFMDIQMPEM 917
+G K+LV+D+NGV+RMV G L G V S L + H MD+ M +
Sbjct: 626 QGLKVLVMDENGVSRMVTKGLLTHLGCDVTTVGSRDECLRVVTHEH--KVVIMDVSMQGI 683
Query: 918 DGFEATRRIRQMESKANEQMMNGGSSVDGTAKRDELHLPILAMTADVIHATFDECLKCGM 977
D +E I + K + + + I+A+T + T + C++ GM
Sbjct: 684 DCYEVAVVIHERFGKRHGRPL------------------IVALTGNTDRVTKENCMRVGM 725
Query: 978 DGYVSKPFEEENLYRELAKFFK 999
DG + KP + L++ +
Sbjct: 726 DGVILKPVSVYKMRSVLSELLE 747
>sp|O74539|MAK3_SCHPO Peroxide stress-activated histidine kinase mak3
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=mak3 PE=1 SV=1
Length = 2344
Score = 110 bits (274), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 97/157 (61%), Gaps = 3/157 (1%)
Query: 372 KVRAEAADVAK--SQFLATVSHEIRTPMNGILGMLALLLDTDLSSTQRDYAQTAQICGKA 429
K RA A ++A+ S FLA +SHE+RTP +G GML+LL DT+L S QRD A+I +
Sbjct: 1774 KARATALELARLRSNFLANISHELRTPFSGFYGMLSLLDDTNLDSEQRDIVSAARISCEM 1833
Query: 430 LIALINEVLDRAKIEARKLELEAVL-FNLRAILDDVLSLFSEKSRNKGIELAVFVSDKVP 488
L+ +IN++L+ +K+EA K+ LE+ L F+L +++ D + KGI L+ VS +P
Sbjct: 1834 LLRVINDLLNFSKLEAGKVTLESDLEFSLESVVCDCMQSVYSACAEKGINLSYNVSPDIP 1893
Query: 489 EFVLGDPGRFRQIITNLVGNSVKFTERGHIFVKVHLA 525
F GD + Q++ +++ NSVK G I V+ LA
Sbjct: 1894 FFTAGDGMKIGQMLKSILDNSVKTVNNGFIRVRAFLA 1930
Score = 76.6 bits (187), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 70/142 (49%), Gaps = 19/142 (13%)
Query: 859 GKKILVVDDNGVNRMVAAGALKKFGATVECAASAKAALDKLQS--PHCFDACFMDIQMPE 916
G KIL+ +DN + RM L+ G V+ A K L +S + + CF+D MP
Sbjct: 2209 GSKILIAEDNPIVRMTLKKQLEHLGMDVDAAEDGKETLQIFESHPDNYYQVCFVDYHMPV 2268
Query: 917 MDGFEATRRIRQMESKANEQMMNGGSSVDGTAKRDELHLPILAMTADVIHATFDECLKCG 976
DG E TRR+R++E K G A LPI A+TAD+ + + G
Sbjct: 2269 YDGLEVTRRMRKIERK------------HGCAP-----LPIFALTADMQPTMETQFQEVG 2311
Query: 977 MDGYVSKPFEEENLYRELAKFF 998
+ Y+SKPF++E L + L ++
Sbjct: 2312 ITHYLSKPFKKETLIKMLLQYL 2333
>sp|Q9M7M1|ETR1_PRUPE Ethylene receptor OS=Prunus persica GN=ETR1 PE=2 SV=1
Length = 738
Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 123/465 (26%), Positives = 198/465 (42%), Gaps = 77/465 (16%)
Query: 375 AEAADVAKSQFLATVSHEIRTPMNGILGMLALLLDTDLSSTQRDYAQTAQICGKALIALI 434
AE A A++ FLA ++HE+RTPM+ I+ + +LL +T+L+ QR +T L LI
Sbjct: 337 AETAIRARNDFLAVMNHEMRTPMHAIIALSSLLQETELTPEQRLMVETILKSSHLLATLI 396
Query: 435 NEVLDRAKIEARKLELEAVLFNLRAILDDVLSLFSEKSRNKGIELAVFVSDKVPEFVLGD 494
N+VLD +++E L+LE FNL ++ +V +L + K + +++ ++ +P +GD
Sbjct: 397 NDVLDLSRLEDGSLQLEIATFNLHSVFREVHNLIKPVASVKKLSVSLNLAADLPVQAVGD 456
Query: 495 PGRFRQIITNLVGNSVKFTERGHIFVKVHLAERTMVKTDAKDETLLNGGTEEGVCRSGTG 554
R QI+ N+VGN+VKF++ G I + + AK E+L + E
Sbjct: 457 EKRLMQIVLNVVGNAVKFSKEGSISITAFV---------AKSESLRDFRAPEFFPAQSDN 507
Query: 555 QFNTLSGL-EAADGRNSWDKFKHLIDAEGFQSNASIINMMASNGGSEDVTLMVCVEDTGI 613
F + ++ G N D K QS A+ ++GGS G+
Sbjct: 508 HFYLRVQVKDSGSGINPQDIPKLFTKFAQTQSLAT-----RNSGGS------------GL 550
Query: 614 GIPLSAQERVFMPFMQADSSTSRHYGGTGIGLSISKCLVELMRGQISFVSR-PQVGSTFS 672
G L+I K V LM G I S P G T
Sbjct: 551 G------------------------------LAICKRFVNLMEGHIWIESEGPGKGCTAI 580
Query: 673 FTAVFG---KCKEYVFEDIKQSKSEDLPPGFKGLKAVVVDEKPVRAAVTQYHLNRLGIMV 729
F G + E + + ++ + F GLK +V+D+ +VT+ L LG V
Sbjct: 581 FIVKLGFAERSNESKLPFLTKVQANHVQTNFPGLKVLVMDDN---GSVTKGLLVHLGCDV 637
Query: 730 KMSSSIKDASSTAKNGLTSSEDKFQPDIILVEKDCWISGEDSGFNAQLLDWKPNGHVFKL 789
SSI + + S E K +V D + G D G+ + + +
Sbjct: 638 TTVSSIDEFLH-----VISQEHK------VVFMDVCMPGID-GYELAVRIHEKFTKRHER 685
Query: 790 PKLILLATNISKDECDKAKAGGFADTVIMKPLRASMIAACLQQVL 834
P L+ L NI K + G D VI+KP+ + + L ++L
Sbjct: 686 PVLVALTGNIDKMTKENCMRVGM-DGVILKPVSVDKMRSVLSELL 729
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 25/146 (17%)
Query: 859 GKKILVVDDNGVNRMVAAGALKKFGATVECAASAKAALDKLQSPHCFDACFMDIQMPEMD 918
G K+LV+DDNG V G L G V +S L + H FMD+ MP +D
Sbjct: 613 GLKVLVMDDNG---SVTKGLLVHLGCDVTTVSSIDEFLHVISQEH--KVVFMDVCMPGID 667
Query: 919 GFEATRRIRQMESKANEQMMNGGSSVDGTAKRDELHLPIL-AMTADVIHATFDECLKCGM 977
G+E RI + +K +E+ P+L A+T ++ T + C++ GM
Sbjct: 668 GYELAVRIHEKFTKRHER-------------------PVLVALTGNIDKMTKENCMRVGM 708
Query: 978 DGYVSKPFEEENLYRELAKFFKSKPL 1003
DG + KP + + L++ + + L
Sbjct: 709 DGVILKPVSVDKMRSVLSELLEHRVL 734
>sp|Q9SSY6|ETR1_CUCSA Ethylene receptor 1 OS=Cucumis sativus GN=ETR1 PE=2 SV=1
Length = 740
Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 93/152 (61%)
Query: 375 AEAADVAKSQFLATVSHEIRTPMNGILGMLALLLDTDLSSTQRDYAQTAQICGKALIALI 434
AE A+ A++ FLA ++HE+RTPM+ I+ + +LL +T+L+ QR +T L LI
Sbjct: 337 AETANHARNDFLAVMNHEMRTPMHAIIALSSLLQETELTPEQRLMVETILKSSNLLATLI 396
Query: 435 NEVLDRAKIEARKLELEAVLFNLRAILDDVLSLFSEKSRNKGIELAVFVSDKVPEFVLGD 494
N+VLD +++E L+L+ FNL A+ +VL+L + K + L + + +P F +GD
Sbjct: 397 NDVLDLSRLEDGSLQLDIGTFNLHAVFKEVLNLIKPVTLVKKLSLTLHLGLDLPVFAVGD 456
Query: 495 PGRFRQIITNLVGNSVKFTERGHIFVKVHLAE 526
R Q I N+VGN+VKF++ G I + +A+
Sbjct: 457 EKRLMQAILNVVGNAVKFSKEGSISISAIVAK 488
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 24/162 (14%)
Query: 846 VPNGSSFHQGLLR----GKKILVVDDNGVNRMVAAGALKKFGATVECAASAKAALDKLQS 901
+P S H+ + G K+LV+DDNGV+R V G L G V A S + L +
Sbjct: 595 LPFTSKIHENSIHTSFPGLKVLVMDDNGVSRSVTKGLLVHLGCEVTTAGSIEEFLRVVSQ 654
Query: 902 PHCFDACFMDIQMPEMDGFEATRRIRQMESKANEQMMNGGSSVDGTAKRDELHLPILAMT 961
H FMDI P +DG+E RIR+ +K +E+ ++ +T
Sbjct: 655 EH--KVVFMDICTPGVDGYELAIRIREKFAKCHERPF------------------MVVLT 694
Query: 962 ADVIHATFDECLKCGMDGYVSKPFEEENLYRELAKFFKSKPL 1003
+ T + CL+ GMDG + KP + + L++ + + L
Sbjct: 695 GNSDKVTKESCLRAGMDGLILKPVSIDKMRSVLSELIERRVL 736
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 103/238 (43%), Gaps = 24/238 (10%)
Query: 604 LMVCVEDTGIGIPLSAQERVFMPFMQADSSTSRHYGGTGIGLSISKCLVELMRGQISFVS 663
L V V+DTG GI ++F F Q + R+ G+G+GL+I K V LM G I S
Sbjct: 511 LRVQVKDTGSGISPQDIPKLFTKFAQT-TVGPRNSCGSGLGLAICKRFVNLMEGHIWLES 569
Query: 664 RPQ-VGSTFSFTAVFG---KCKEYVFEDIKQSKSEDLPPGFKGLKAVVVDEKPVRAAVTQ 719
G T +F G + E + + F GLK +V+D+ V +VT+
Sbjct: 570 EGLGKGCTATFIVKLGIAEQSNESKLPFTSKIHENSIHTSFPGLKVLVMDDNGVSRSVTK 629
Query: 720 YHLNRLGIMVKMSSSIKDASSTAKNGLTSSEDKFQPDIILVEKDCWISGEDSGFNAQLLD 779
L LG V + SI++ + S E K +V D G D G+ +
Sbjct: 630 GLLVHLGCEVTTAGSIEEFLR-----VVSQEHK------VVFMDICTPGVD-GYELAIRI 677
Query: 780 WKPNGHVFKLPKLILLATN---ISKDECDKAKAGGFADTVIMKPLRASMIAACLQQVL 834
+ + P +++L N ++K+ C +A G I+KP+ + + L +++
Sbjct: 678 REKFAKCHERPFMVVLTGNSDKVTKESCLRAGMDGL----ILKPVSIDKMRSVLSELI 731
>sp|O82436|ETR1_CUCMN Ethylene receptor 1 OS=Cucumis melo var. cantalupensis GN=ETR1 PE=2
SV=1
Length = 740
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 92/152 (60%)
Query: 375 AEAADVAKSQFLATVSHEIRTPMNGILGMLALLLDTDLSSTQRDYAQTAQICGKALIALI 434
AE A A++ FLA ++HE+RTPM+ I+ + +LL +T+L+ QR +T L LI
Sbjct: 337 AETAIRARNDFLAVMNHEMRTPMHAIIALSSLLQETELTPEQRLMVETILKSSNLLATLI 396
Query: 435 NEVLDRAKIEARKLELEAVLFNLRAILDDVLSLFSEKSRNKGIELAVFVSDKVPEFVLGD 494
N+VLD +++E L+L+ FNL A+ +VL+L + K + L + + +P F +GD
Sbjct: 397 NDVLDLSRLEDGSLQLDIGTFNLHAVFKEVLNLIKPVTLVKKLSLTLHLGPDLPVFAVGD 456
Query: 495 PGRFRQIITNLVGNSVKFTERGHIFVKVHLAE 526
R Q I N+VGN+VKF++ G I + +A+
Sbjct: 457 EKRLMQAILNVVGNAVKFSKEGSISISAIVAK 488
Score = 70.5 bits (171), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 24/162 (14%)
Query: 846 VPNGSSFHQGLLR----GKKILVVDDNGVNRMVAAGALKKFGATVECAASAKAALDKLQS 901
+P S H+ + G K+LV+DDNGV+R V G L G V A S + L +
Sbjct: 595 LPYTSKIHENSIHTSFPGLKVLVMDDNGVSRSVTKGLLVHLGCEVTTAGSIEEFLRVVSQ 654
Query: 902 PHCFDACFMDIQMPEMDGFEATRRIRQMESKANEQMMNGGSSVDGTAKRDELHLPILAMT 961
H FMDI P +DG+E RIR+ +K +E+ ++ +T
Sbjct: 655 EH--KVVFMDICTPGVDGYELAIRIREKFAKCHERPF------------------MVVLT 694
Query: 962 ADVIHATFDECLKCGMDGYVSKPFEEENLYRELAKFFKSKPL 1003
+ T + CL+ GMDG + KP + + L++ + + L
Sbjct: 695 GNSDKVTKESCLRAGMDGLILKPVSIDKMRSVLSELIERRVL 736
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 104/238 (43%), Gaps = 24/238 (10%)
Query: 604 LMVCVEDTGIGIPLSAQERVFMPFMQADSSTSRHYGGTGIGLSISKCLVELMRGQISFVS 663
L V V+DTG GI ++F F Q + R+ GG+G+GL+I K V LM G I S
Sbjct: 511 LRVQVKDTGSGISPQDIPKLFTKFAQT-TVGPRNSGGSGLGLAICKRFVNLMEGHIWLES 569
Query: 664 RPQ-VGSTFSFTAVFG---KCKEYVFEDIKQSKSEDLPPGFKGLKAVVVDEKPVRAAVTQ 719
G T +F G + E + + F GLK +V+D+ V +VT+
Sbjct: 570 EGLGKGCTATFIVKLGIADQSNESKLPYTSKIHENSIHTSFPGLKVLVMDDNGVSRSVTK 629
Query: 720 YHLNRLGIMVKMSSSIKDASSTAKNGLTSSEDKFQPDIILVEKDCWISGEDSGFNAQLLD 779
L LG V + SI++ + S E K +V D G D G+ +
Sbjct: 630 GLLVHLGCEVTTAGSIEEFLR-----VVSQEHK------VVFMDICTPGVD-GYELAIRI 677
Query: 780 WKPNGHVFKLPKLILLATN---ISKDECDKAKAGGFADTVIMKPLRASMIAACLQQVL 834
+ + P +++L N ++K+ C +A G I+KP+ + + L +++
Sbjct: 678 REKFAKCHERPFMVVLTGNSDKVTKESCLRAGMDGL----ILKPVSIDKMRSVLSELI 731
>sp|Q54W36|DHKH_DICDI Hybrid signal transduction histidine kinase H OS=Dictyostelium
discoideum GN=dhkH PE=3 SV=1
Length = 1378
Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 97/172 (56%), Gaps = 3/172 (1%)
Query: 364 DFHKMQELKVRAEAADVAKSQFLATVSHEIRTPMNGILGMLALLLDTD--LSSTQRDYAQ 421
D + + + R E A+ +K+ FL T+SHE+RTP+ GI+G+ + L + L+S Q D
Sbjct: 474 DVNDQKTAQDRIENAEKSKALFLQTMSHEMRTPLAGIMGINSWLSTSSPQLTSEQLDGCH 533
Query: 422 TAQICGKALIALINEVLDRAKIEARKLELEAVLFNLRAILDDVLSLFSEKSRNKGIELAV 481
T +C +AL+ LIN +LD +K+E K+ LE F I++D + + S ++ K +++
Sbjct: 534 TIDMCAEALLVLINNILDLSKLEENKIILEETEFYPTKIVEDSVDILSSQAEQKKLDIIF 593
Query: 482 FVSDKVPEFVLGDPGRFRQIITNLVGNSVKFTE-RGHIFVKVHLAERTMVKT 532
+ V+GD R RQ++TNL+ NSVKFT G I V + T T
Sbjct: 594 QLKYNCLSKVVGDFYRIRQVLTNLISNSVKFTPANGQIIVGCEIYHETTPST 645
Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 48/70 (68%)
Query: 604 LMVCVEDTGIGIPLSAQERVFMPFMQADSSTSRHYGGTGIGLSISKCLVELMRGQISFVS 663
L+ V D GIGIP +E++F F Q D+ST+R YGG+G+GL+ISK L +L+ G I F S
Sbjct: 730 LLFWVIDNGIGIPEEGREKLFQTFSQYDASTTRKYGGSGLGLAISKRLTQLLGGDIWFES 789
Query: 664 RPQVGSTFSF 673
+ GS+F F
Sbjct: 790 QKGKGSSFHF 799
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 67/145 (46%), Gaps = 23/145 (15%)
Query: 855 GLLRGKKILVVDDNGVNRMVAAGALKKFGATVE---CAASAKAALDKLQSPHCFDACFMD 911
G+ KI+V +D+ VN+ VA L K G E + + A+D +++ D MD
Sbjct: 1238 GIRYPLKIMVAEDSLVNQKVACRFLTKLGYKKEEIIFVVNGQQAIDHIENVEMVDVILMD 1297
Query: 912 IQMPEMDGFEATRRIRQMESKANEQMMNGGSSVDGTAKRDELHLPILAMTADVIHATFDE 971
+QMPE+DG EAT RIR I+ +TA+ + D+
Sbjct: 1298 MQMPEVDGCEATTRIRMRYPTTGPH--------------------IIGLTANAFNEDKDK 1337
Query: 972 CLKCGMDGYVSKPFEEENLYRELAK 996
CL GM Y++KP + + L EL +
Sbjct: 1338 CLLSGMCHYLAKPVKMDILAVELKR 1362
>sp|Q38846|ERS1_ARATH Ethylene response sensor 1 OS=Arabidopsis thaliana GN=ERS1 PE=1
SV=1
Length = 613
Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 153/321 (47%), Gaps = 57/321 (17%)
Query: 361 VEDDFHKMQELKVRAEAADVAKSQFLATVSHEIRTPMNGILGMLALLLDTDLSSTQRDYA 420
+E +F + + + AE A A++ FLA ++HE+RTPM+ I+ + +LLL+T+LS QR
Sbjct: 324 MEQNF-ALDKARQEAEMAVHARNDFLAVMNHEMRTPMHAIISLSSLLLETELSPEQRVMI 382
Query: 421 QTAQICGKALIALINEVLDRAKIEARKLELEAVLFNLRAILDDVLSLFSEKSRNKGIELA 480
+T + LI++VLD +++E L LE F+L+AI ++V+SL + K +
Sbjct: 383 ETILKSSNLVATLISDVLDLSRLEDGSLLLENEPFSLQAIFEEVISLIKPIASVKKLSTN 442
Query: 481 VFVSDKVPEFVLGDPGRFRQIITNLVGNSVKFTERGHIFVKVHLAERTMVKTDAKDETLL 540
+ +S +P + +GD R Q I N++GN+VKFT+ G+I +++ + K E+L
Sbjct: 443 LILSADLPTYAIGDEKRLMQTILNIMGNAVKFTKEGYI---------SIIASIMKPESLQ 493
Query: 541 NGGTEEGVCRSGTGQFNTLSGLEAADGRNSWDKFKHLIDAEGFQSNASIINMMASNGGSE 600
+ E F L D+ +
Sbjct: 494 ELPSPEF--------------------------FPVLSDSHFY----------------- 510
Query: 601 DVTLMVCVEDTGIGIPLSAQERVFMPFMQADSSTSRHYGGTGIGLSISKCLVELMRGQIS 660
L V V+DTG GI +F F+Q + T R++ G G+GL++ K V LM G +
Sbjct: 511 ---LCVQVKDTGCGIHTQDIPLLFTKFVQPRTGTQRNHSGGGLGLALCKRFVGLMGGYMW 567
Query: 661 FVSRP-QVGSTFSFTAVFGKC 680
S + G T SF G C
Sbjct: 568 IESEGLEKGCTASFIIRLGIC 588
>sp|Q9ZWL6|ETR1_PASED Ethylene receptor OS=Passiflora edulis GN=ETR1 PE=2 SV=1
Length = 738
Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 96/152 (63%)
Query: 375 AEAADVAKSQFLATVSHEIRTPMNGILGMLALLLDTDLSSTQRDYAQTAQICGKALIALI 434
AE A A++ FLA ++HE+RTPM+ ++ + +LL +T+L+ QR +T L LI
Sbjct: 337 AETAIRARNDFLAVMNHEMRTPMHAVIALSSLLQETELTPEQRLMVETILKSSNLLATLI 396
Query: 435 NEVLDRAKIEARKLELEAVLFNLRAILDDVLSLFSEKSRNKGIELAVFVSDKVPEFVLGD 494
N+VLD +K+E L+L++ FNL A+ +VL+L + K + L + ++ +PE+ +GD
Sbjct: 397 NDVLDLSKLEDGSLQLDSGTFNLHAVFREVLNLIKPIASVKKLLLLLNLAPDLPEYAVGD 456
Query: 495 PGRFRQIITNLVGNSVKFTERGHIFVKVHLAE 526
R QII N+VGN++KF++ G I + +A+
Sbjct: 457 EKRLIQIILNIVGNAMKFSKEGSISITAIVAK 488
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 22/150 (14%)
Query: 854 QGLLRGKKILVVDDNGVNRMVAAGALKKFGATVECAASAKAALDKLQSPHCFDACFMDIQ 913
Q G K+L++DDNGV+RMV G L G V S++ + H FMD+
Sbjct: 608 QTTFPGLKVLLMDDNGVSRMVTKGLLLHLGCDVTTVGSSEECIRVASQDH--RVVFMDVG 665
Query: 914 MPEMDGFEATRRIRQMESKANEQMMNGGSSVDGTAKRDELHLPILAMTADVIHATFDECL 973
MPE GFEA R+ + +K +E+ + ++A+TA T + C+
Sbjct: 666 MPE--GFEAAVRLHEKFTKRHERPL------------------VVALTASTDRMTKENCM 705
Query: 974 KCGMDGYVSKPFEEENLYRELAKFFKSKPL 1003
+ GMDG + KP + + L+ + K L
Sbjct: 706 RVGMDGAILKPVSVDKMRSVLSDLLEHKVL 735
Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 64/135 (47%), Gaps = 20/135 (14%)
Query: 604 LMVCVEDTGIGIPLSAQERVFMPFMQADSSTSRHYGGTGIGLSISKCLVELMRGQISFVS 663
L V V+D+G+GI ++F+ F Q ++ +R+ G+G+GL+I + V LM G I S
Sbjct: 511 LRVQVKDSGVGINPQDIPKLFIKFAQTQTTGARNSSGSGLGLAICRRFVNLMDGHIWLES 570
Query: 664 RPQVGSTFSFTAVFGKCKEYVFEDIKQSKSEDLPP------------GFKGLKAVVVDEK 711
G TA+F V I + +E PP F GLK +++D+
Sbjct: 571 E---GLGKGCTAIF-----IVKLGIPERLNESKPPFMSKVAVDHGQTTFPGLKVLLMDDN 622
Query: 712 PVRAAVTQYHLNRLG 726
V VT+ L LG
Sbjct: 623 GVSRMVTKGLLLHLG 637
>sp|O81122|ETR1_MALDO Ethylene receptor OS=Malus domestica GN=ETR1 PE=2 SV=1
Length = 741
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 93/152 (61%)
Query: 375 AEAADVAKSQFLATVSHEIRTPMNGILGMLALLLDTDLSSTQRDYAQTAQICGKALIALI 434
AE A A++ FLA ++HE+RTPM+ I+ + +LL +T+L++ QR +T L LI
Sbjct: 337 AETAIRARNDFLAVMNHEMRTPMHAIIALSSLLQETELTAEQRLMVETILRSSNLLATLI 396
Query: 435 NEVLDRAKIEARKLELEAVLFNLRAILDDVLSLFSEKSRNKGIELAVFVSDKVPEFVLGD 494
N+VLD +++E L+LE FNL ++ +V ++ + K + + + ++ +P + +GD
Sbjct: 397 NDVLDLSRLEDGSLQLEIATFNLHSVFREVHNMIKPVASIKRLSVTLNIAADLPMYAIGD 456
Query: 495 PGRFRQIITNLVGNSVKFTERGHIFVKVHLAE 526
R Q I N+VGN+VKF++ G I + +A+
Sbjct: 457 EKRLMQTILNVVGNAVKFSKEGSISITAFVAK 488
Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 22/146 (15%)
Query: 859 GKKILVVDDNGVNRMVAAGALKKFGATVECAASAKAALDKLQSPHCFDACFMDIQMPEMD 918
G K+LV+DDNGV+R V G L G V + L + H FMD+ MP +D
Sbjct: 613 GLKVLVMDDNGVSRSVTKGLLAHLGCDVTAVSLIDELLHVISQEH--KVVFMDVSMPGID 670
Query: 919 GFEATRRIRQMESKANEQMMNGGSSVDGTAKRDELHLPIL-AMTADVIHATFDECLKCGM 977
G+E RI + +K +E+ P+L A+T + T + C++ G+
Sbjct: 671 GYELAVRIHEKFTKRHER-------------------PVLVALTGSIDKITKENCMRVGV 711
Query: 978 DGYVSKPFEEENLYRELAKFFKSKPL 1003
DG + KP + + L++ + + L
Sbjct: 712 DGVILKPVSVDKMRSVLSELLEHRVL 737
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 103/235 (43%), Gaps = 17/235 (7%)
Query: 604 LMVCVEDTGIGIPLSAQERVFMPFMQADSSTSRHYGGTGIGLSISKCLVELMRGQISFVS 663
L V V+D+G GI ++F F Q + +R+ GG+G+GL+I K V LM G I S
Sbjct: 511 LRVQVKDSGSGINPQDIPKLFTKFAQTQALATRNSGGSGLGLAICKRFVNLMEGHIWIES 570
Query: 664 RPQ-VGSTFSFTAVFG---KCKEYVFEDIKQSKSEDLPPGFKGLKAVVVDEKPVRAAVTQ 719
G T +F G + E + ++ + F GLK +V+D+ V +VT+
Sbjct: 571 EGLGKGCTATFIVKLGFPERSNESKLPFAPKLQANHVQTNFPGLKVLVMDDNGVSRSVTK 630
Query: 720 YHLNRLGIMVKMSSSIKDASSTAKNGLTSSEDKFQPDIILVEKDCWISGEDSGFNAQLLD 779
L LG V S I + + S E K +V D + G D G+ +
Sbjct: 631 GLLAHLGCDVTAVSLIDELLH-----VISQEHK------VVFMDVSMPGID-GYELAVRI 678
Query: 780 WKPNGHVFKLPKLILLATNISKDECDKAKAGGFADTVIMKPLRASMIAACLQQVL 834
+ + P L+ L +I K + G D VI+KP+ + + L ++L
Sbjct: 679 HEKFTKRHERPVLVALTGSIDKITKENCMRVG-VDGVILKPVSVDKMRSVLSELL 732
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 356,807,544
Number of Sequences: 539616
Number of extensions: 14862598
Number of successful extensions: 38438
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 239
Number of HSP's successfully gapped in prelim test: 463
Number of HSP's that attempted gapping in prelim test: 37000
Number of HSP's gapped (non-prelim): 1155
length of query: 1006
length of database: 191,569,459
effective HSP length: 128
effective length of query: 878
effective length of database: 122,498,611
effective search space: 107553780458
effective search space used: 107553780458
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)