Query 001847
Match_columns 1005
No_of_seqs 630 out of 4735
Neff 8.2
Searched_HMMs 46136
Date Fri Mar 29 10:44:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001847.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001847hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0610 Putative serine/threon 100.0 8E-52 1.7E-56 443.2 26.5 336 646-981 50-415 (459)
2 KOG0605 NDR and related serine 100.0 9.6E-50 2.1E-54 440.5 26.3 319 668-992 137-477 (550)
3 KOG0598 Ribosomal protein S6 k 100.0 1.5E-49 3.2E-54 423.6 23.5 277 669-975 22-298 (357)
4 KOG0592 3-phosphoinositide-dep 100.0 2.3E-49 5E-54 436.5 23.0 286 670-977 71-357 (604)
5 KOG0581 Mitogen-activated prot 100.0 1.2E-48 2.7E-53 416.4 22.3 262 668-966 75-343 (364)
6 KOG0616 cAMP-dependent protein 100.0 1.8E-48 3.9E-53 400.5 22.6 275 669-977 41-318 (355)
7 KOG0615 Serine/threonine prote 100.0 2.4E-49 5.2E-54 423.3 16.0 261 671-965 171-444 (475)
8 KOG0575 Polo-like serine/threo 100.0 2.7E-48 5.9E-53 435.8 24.2 256 672-962 18-273 (592)
9 KOG0694 Serine/threonine prote 100.0 9E-46 2E-50 419.5 24.6 289 667-987 363-653 (694)
10 KOG0593 Predicted protein kina 100.0 5E-46 1.1E-50 382.7 15.6 260 671-964 1-290 (396)
11 KOG0595 Serine/threonine-prote 100.0 2.4E-44 5.2E-49 386.1 23.4 259 671-964 9-274 (429)
12 KOG0591 NIMA (never in mitosis 100.0 2.9E-45 6.2E-50 373.5 11.3 257 670-954 17-281 (375)
13 KOG0597 Serine-threonine prote 100.0 4E-44 8.7E-49 393.8 19.6 256 672-964 2-257 (808)
14 KOG0588 Serine/threonine prote 100.0 9.4E-44 2E-48 399.2 21.4 264 671-970 11-275 (786)
15 KOG0661 MAPK related serine/th 100.0 4.6E-44 1E-48 389.0 16.2 263 669-967 7-300 (538)
16 KOG0583 Serine/threonine prote 100.0 7.9E-43 1.7E-47 395.1 26.3 262 669-964 14-281 (370)
17 KOG0600 Cdc2-related protein k 100.0 1.8E-43 3.9E-48 387.0 20.1 289 670-997 115-433 (560)
18 KOG0659 Cdk activating kinase 100.0 6.6E-43 1.4E-47 354.7 22.1 272 672-981 2-300 (318)
19 KOG0585 Ca2+/calmodulin-depend 100.0 4.1E-43 8.8E-48 380.7 21.1 267 668-963 93-377 (576)
20 cd05612 STKc_PRKX_like Catalyt 100.0 2E-42 4.4E-47 384.7 25.8 278 672-983 1-279 (291)
21 KOG0582 Ste20-like serine/thre 100.0 1.3E-42 2.7E-47 375.0 23.0 273 665-967 19-302 (516)
22 KOG0033 Ca2+/calmodulin-depend 100.0 2.2E-44 4.7E-49 360.0 8.6 261 669-964 8-273 (355)
23 PTZ00426 cAMP-dependent protei 100.0 3.2E-42 6.9E-47 391.3 27.2 286 668-987 26-313 (340)
24 PTZ00263 protein kinase A cata 100.0 4.1E-42 9E-47 389.1 26.7 267 670-970 16-283 (329)
25 cd05571 STKc_PKB Catalytic dom 100.0 5.3E-42 1.2E-46 387.2 26.8 263 678-971 1-264 (323)
26 KOG0578 p21-activated serine/t 100.0 6.9E-43 1.5E-47 389.4 19.0 267 658-963 261-528 (550)
27 KOG0580 Serine/threonine prote 100.0 5.2E-43 1.1E-47 350.8 14.0 261 669-964 19-279 (281)
28 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.9E-41 4.2E-46 384.3 27.2 278 672-987 1-284 (333)
29 cd05628 STKc_NDR1 Catalytic do 100.0 4.1E-41 8.9E-46 386.2 30.0 294 672-972 1-307 (363)
30 cd05631 STKc_GRK4 Catalytic do 100.0 2.5E-41 5.4E-46 374.7 26.5 275 673-975 1-278 (285)
31 cd05599 STKc_NDR_like Catalyti 100.0 2.4E-41 5.2E-46 388.4 27.3 307 672-984 1-320 (364)
32 KOG0198 MEKK and related serin 100.0 4.9E-42 1.1E-46 373.4 20.2 262 672-965 17-283 (313)
33 cd05629 STKc_NDR_like_fungal C 100.0 1.8E-41 3.8E-46 391.4 26.0 314 672-991 1-336 (377)
34 KOG0690 Serine/threonine prote 100.0 4.1E-42 9E-47 355.4 18.2 271 668-969 164-435 (516)
35 cd05593 STKc_PKB_gamma Catalyt 100.0 5.1E-41 1.1E-45 379.9 27.4 263 678-971 1-264 (328)
36 cd05585 STKc_YPK1_like Catalyt 100.0 5.7E-41 1.2E-45 376.9 27.6 260 680-971 1-260 (312)
37 cd05595 STKc_PKB_beta Catalyti 100.0 1.1E-40 2.3E-45 376.6 28.1 263 678-971 1-264 (323)
38 cd05596 STKc_ROCK Catalytic do 100.0 7.6E-41 1.6E-45 384.7 27.1 286 668-986 39-332 (370)
39 cd05626 STKc_LATS2 Catalytic d 100.0 1.8E-40 3.9E-45 383.4 29.3 296 673-974 2-321 (381)
40 cd05598 STKc_LATS Catalytic do 100.0 9.6E-41 2.1E-45 385.2 26.6 297 672-975 1-319 (376)
41 cd05627 STKc_NDR2 Catalytic do 100.0 1.1E-40 2.4E-45 382.3 26.5 297 672-972 1-307 (360)
42 cd05574 STKc_phototropin_like 100.0 4.1E-40 8.9E-45 370.5 30.4 311 672-982 1-313 (316)
43 cd05601 STKc_CRIK Catalytic do 100.0 5.6E-41 1.2E-45 380.0 23.4 279 672-984 1-287 (330)
44 KOG0599 Phosphorylase kinase g 100.0 5E-42 1.1E-46 347.7 13.1 266 671-970 16-295 (411)
45 cd05590 STKc_nPKC_eta Catalyti 100.0 1.5E-40 3.1E-45 374.9 26.5 265 678-973 1-268 (320)
46 cd05587 STKc_cPKC Catalytic do 100.0 2.3E-40 5E-45 374.1 28.0 270 673-973 1-272 (324)
47 KOG0612 Rho-associated, coiled 100.0 5.7E-42 1.2E-46 403.7 15.3 287 668-986 71-364 (1317)
48 KOG0660 Mitogen-activated prot 100.0 3.8E-41 8.3E-46 357.7 20.1 261 672-965 22-317 (359)
49 cd05589 STKc_PKN Catalytic dom 100.0 2.1E-40 4.5E-45 374.4 27.5 266 674-971 1-270 (324)
50 cd05573 STKc_ROCK_NDR_like Cat 100.0 7.1E-41 1.5E-45 382.2 23.9 305 672-984 1-309 (350)
51 KOG0663 Protein kinase PITSLRE 100.0 3.4E-41 7.5E-46 351.5 19.2 263 671-967 75-370 (419)
52 cd05625 STKc_LATS1 Catalytic d 100.0 2.6E-40 5.5E-45 382.4 28.1 293 673-969 2-316 (382)
53 cd05591 STKc_nPKC_epsilon Cata 100.0 2.5E-40 5.5E-45 373.2 27.4 266 678-974 1-270 (321)
54 cd05575 STKc_SGK Catalytic dom 100.0 2.6E-40 5.6E-45 373.4 26.8 263 678-971 1-264 (323)
55 KOG0611 Predicted serine/threo 100.0 2E-41 4.4E-46 358.8 16.4 255 671-962 52-307 (668)
56 cd05594 STKc_PKB_alpha Catalyt 100.0 1.8E-40 3.9E-45 375.1 25.2 263 678-971 1-265 (325)
57 cd05621 STKc_ROCK2 Catalytic d 100.0 2.2E-40 4.8E-45 380.5 25.9 268 669-969 40-315 (370)
58 cd05616 STKc_cPKC_beta Catalyt 100.0 5.6E-40 1.2E-44 370.7 27.4 271 673-974 1-273 (323)
59 KOG0032 Ca2+/calmodulin-depend 100.0 4.4E-40 9.5E-45 372.4 26.2 259 671-964 34-299 (382)
60 cd05588 STKc_aPKC Catalytic do 100.0 6E-40 1.3E-44 371.4 27.3 265 678-973 1-277 (329)
61 cd05592 STKc_nPKC_theta_delta 100.0 6.7E-40 1.5E-44 368.9 27.4 265 678-976 1-266 (316)
62 cd05620 STKc_nPKC_delta Cataly 100.0 9.3E-40 2E-44 367.7 27.4 261 678-972 1-262 (316)
63 cd05615 STKc_cPKC_alpha Cataly 100.0 1.3E-39 2.7E-44 367.8 28.4 270 673-973 1-272 (323)
64 cd05619 STKc_nPKC_theta Cataly 100.0 1.3E-39 2.7E-44 366.6 27.9 261 678-973 1-263 (316)
65 KOG0201 Serine/threonine prote 100.0 6.9E-42 1.5E-46 369.7 9.0 258 672-965 13-270 (467)
66 cd05622 STKc_ROCK1 Catalytic d 100.0 1.1E-39 2.3E-44 375.1 27.7 268 668-969 39-315 (371)
67 cd05607 STKc_GRK7 Catalytic do 100.0 1.3E-39 2.9E-44 359.3 27.2 267 680-975 1-271 (277)
68 cd05604 STKc_SGK3 Catalytic do 100.0 8.5E-40 1.9E-44 369.6 26.0 264 678-972 1-265 (325)
69 cd05570 STKc_PKC Catalytic dom 100.0 1.3E-39 2.9E-44 366.8 27.4 263 678-971 1-265 (318)
70 KOG0192 Tyrosine kinase specif 100.0 1.1E-39 2.4E-44 366.0 25.6 259 667-955 36-300 (362)
71 cd05584 STKc_p70S6K Catalytic 100.0 1.8E-39 4E-44 366.5 27.7 263 677-970 1-268 (323)
72 cd05605 STKc_GRK4_like Catalyt 100.0 1.8E-39 4E-44 359.8 27.1 275 673-975 1-278 (285)
73 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.9E-39 4.1E-44 367.0 27.6 274 678-982 1-284 (327)
74 cd05618 STKc_aPKC_iota Catalyt 100.0 1.6E-39 3.4E-44 367.9 26.9 264 678-972 1-276 (329)
75 cd05608 STKc_GRK1 Catalytic do 100.0 2.1E-39 4.5E-44 358.4 27.0 267 680-975 1-274 (280)
76 cd05602 STKc_SGK1 Catalytic do 100.0 1.7E-39 3.8E-44 367.0 26.9 263 678-971 1-264 (325)
77 cd05586 STKc_Sck1_like Catalyt 100.0 7.2E-40 1.6E-44 371.0 23.4 263 680-972 1-267 (330)
78 cd05597 STKc_DMPK_like Catalyt 100.0 3.1E-39 6.7E-44 365.9 28.0 273 672-975 1-283 (331)
79 cd05603 STKc_SGK2 Catalytic do 100.0 2.3E-39 5E-44 365.4 26.8 262 678-970 1-263 (321)
80 KOG0667 Dual-specificity tyros 100.0 5.2E-40 1.1E-44 373.6 21.4 254 673-965 187-509 (586)
81 KOG0594 Protein kinase PCTAIRE 100.0 1.4E-39 3.1E-44 347.5 23.2 262 671-965 10-309 (323)
82 cd07848 STKc_CDKL5 Catalytic d 100.0 2.7E-39 5.9E-44 358.4 25.4 257 672-961 1-287 (287)
83 cd05614 STKc_MSK2_N N-terminal 100.0 4E-39 8.7E-44 365.2 27.2 271 673-973 1-282 (332)
84 cd07871 STKc_PCTAIRE3 Catalyti 100.0 3.4E-39 7.3E-44 358.3 25.7 256 671-961 4-288 (288)
85 KOG4717 Serine/threonine prote 100.0 7.2E-40 1.6E-44 355.7 19.4 261 672-968 18-280 (864)
86 cd05623 STKc_MRCK_alpha Cataly 100.0 4.2E-39 9E-44 365.0 26.4 275 672-977 1-285 (332)
87 KOG0589 Serine/threonine prote 100.0 4E-40 8.7E-45 366.6 17.6 262 671-965 3-265 (426)
88 cd07869 STKc_PFTAIRE1 Catalyti 100.0 4.1E-39 9E-44 360.2 25.9 261 671-966 4-296 (303)
89 cd05624 STKc_MRCK_beta Catalyt 100.0 3.6E-39 7.9E-44 365.3 25.6 277 672-977 1-285 (331)
90 cd05582 STKc_RSK_N N-terminal 100.0 2.3E-39 5.1E-44 364.8 23.6 264 677-972 1-268 (318)
91 cd06649 PKc_MEK2 Catalytic dom 100.0 1.4E-38 2.9E-43 360.7 28.9 262 669-967 2-310 (331)
92 KOG0986 G protein-coupled rece 100.0 9.6E-40 2.1E-44 352.0 15.5 273 667-969 180-457 (591)
93 KOG0614 cGMP-dependent protein 100.0 2.3E-40 5E-45 360.0 10.0 296 668-993 416-712 (732)
94 cd05580 STKc_PKA Catalytic dom 100.0 5.4E-38 1.2E-42 348.9 29.3 268 672-973 1-269 (290)
95 KOG0608 Warts/lats-like serine 100.0 2.4E-39 5.2E-44 358.9 18.1 321 669-995 626-964 (1034)
96 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1.6E-38 3.6E-43 360.8 25.4 264 673-968 1-300 (338)
97 cd05632 STKc_GRK5 Catalytic do 100.0 5E-38 1.1E-42 348.3 28.2 273 673-973 1-276 (285)
98 KOG0579 Ste20-like serine/thre 100.0 7.3E-40 1.6E-44 362.1 12.8 260 672-966 32-297 (1187)
99 KOG0658 Glycogen synthase kina 100.0 1.8E-39 4E-44 345.5 15.3 256 672-967 24-315 (364)
100 cd05630 STKc_GRK6 Catalytic do 100.0 4.5E-38 9.8E-43 348.7 26.9 270 673-971 1-274 (285)
101 cd07862 STKc_CDK6 Catalytic do 100.0 3.4E-38 7.4E-43 350.2 25.9 256 672-961 1-290 (290)
102 cd05609 STKc_MAST Catalytic do 100.0 1.6E-37 3.4E-42 347.8 31.0 302 672-990 1-303 (305)
103 PHA03212 serine/threonine kina 100.0 3.3E-38 7.2E-43 364.6 26.1 254 669-964 89-382 (391)
104 PLN00034 mitogen-activated pro 100.0 7.6E-38 1.6E-42 357.8 27.7 256 669-964 71-334 (353)
105 cd06650 PKc_MEK1 Catalytic dom 100.0 9E-38 1.9E-42 354.2 27.7 259 669-964 2-305 (333)
106 KOG0574 STE20-like serine/thre 100.0 1.8E-40 3.8E-45 339.8 4.5 256 673-965 34-290 (502)
107 KOG0577 Serine/threonine prote 100.0 3E-39 6.4E-44 356.0 14.2 254 673-963 27-283 (948)
108 KOG0596 Dual specificity; seri 100.0 1.2E-38 2.7E-43 351.2 18.6 260 669-963 358-632 (677)
109 KOG0197 Tyrosine kinases [Sign 100.0 1.9E-38 4E-43 354.0 20.3 255 664-950 198-453 (468)
110 cd07853 STKc_NLK Catalytic dom 100.0 1.6E-37 3.5E-42 357.7 27.8 261 673-967 1-297 (372)
111 cd07876 STKc_JNK2 Catalytic do 100.0 1.4E-37 3E-42 356.5 26.9 255 671-963 20-320 (359)
112 cd07875 STKc_JNK1 Catalytic do 100.0 2E-37 4.4E-42 355.9 27.4 255 671-963 23-323 (364)
113 PTZ00036 glycogen synthase kin 100.0 1.6E-37 3.5E-42 364.5 26.9 256 671-966 65-359 (440)
114 cd07872 STKc_PCTAIRE2 Catalyti 100.0 2E-37 4.3E-42 347.6 25.9 260 670-964 4-292 (309)
115 cd07874 STKc_JNK3 Catalytic do 100.0 2.6E-37 5.7E-42 353.7 26.6 257 670-964 15-317 (355)
116 cd07863 STKc_CDK4 Catalytic do 100.0 2E-37 4.4E-42 343.5 24.7 255 673-961 1-288 (288)
117 cd06625 STKc_MEKK3_like Cataly 100.0 9.4E-37 2E-41 333.2 28.2 260 672-961 2-263 (263)
118 PTZ00283 serine/threonine prot 100.0 3E-37 6.6E-42 366.6 25.8 270 669-969 29-308 (496)
119 KOG0696 Serine/threonine prote 100.0 2.4E-38 5.2E-43 336.1 14.5 283 667-982 344-630 (683)
120 cd06644 STKc_STK10_LOK Catalyt 100.0 1.1E-36 2.4E-41 338.6 28.4 264 671-969 11-280 (292)
121 KOG0983 Mitogen-activated prot 100.0 6.7E-38 1.5E-42 318.1 16.7 261 669-965 89-356 (391)
122 PTZ00284 protein kinase; Provi 100.0 5.6E-37 1.2E-41 363.6 27.3 254 670-964 127-444 (467)
123 cd05577 STKc_GRK Catalytic dom 100.0 7.2E-37 1.6E-41 337.4 26.3 264 680-971 1-267 (277)
124 PTZ00267 NIMA-related protein 100.0 5.3E-37 1.1E-41 364.2 26.9 261 671-964 66-329 (478)
125 cd05102 PTKc_VEGFR3 Catalytic 100.0 4.2E-37 9.1E-42 349.5 25.0 257 667-950 2-326 (338)
126 cd07878 STKc_p38beta_MAPK11 Ca 100.0 2.7E-37 5.9E-42 351.8 23.4 255 671-964 14-304 (343)
127 cd08529 STKc_FA2-like Catalyti 100.0 1.7E-36 3.7E-41 329.6 27.8 256 673-961 1-256 (256)
128 cd08223 STKc_Nek4 Catalytic do 100.0 2E-36 4.3E-41 329.4 28.4 256 673-961 1-257 (257)
129 cd05572 STKc_cGK_PKG Catalytic 100.0 1.3E-36 2.9E-41 332.1 26.5 258 680-967 1-261 (262)
130 cd08227 PK_STRAD_alpha Pseudok 100.0 1.2E-36 2.6E-41 344.2 26.6 265 676-965 2-314 (327)
131 KOG0607 MAP kinase-interacting 100.0 1.9E-37 4.2E-42 320.7 17.5 265 674-967 79-370 (463)
132 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1.5E-36 3.3E-41 339.0 26.4 261 670-965 4-293 (301)
133 cd06609 STKc_MST3_like Catalyt 100.0 2.6E-36 5.7E-41 332.2 26.9 258 672-965 1-258 (274)
134 PF00069 Pkinase: Protein kina 100.0 4.6E-37 1E-41 334.6 20.7 254 674-961 1-260 (260)
135 cd06619 PKc_MKK5 Catalytic dom 100.0 3.3E-36 7.2E-41 332.6 27.6 252 673-965 2-260 (279)
136 cd06637 STKc_TNIK Catalytic do 100.0 2.5E-36 5.3E-41 331.7 26.2 255 672-961 6-272 (272)
137 cd06611 STKc_SLK_like Catalyti 100.0 2.4E-36 5.1E-41 333.6 26.0 259 672-965 5-269 (280)
138 cd07861 STKc_CDK1_euk Catalyti 100.0 2.6E-36 5.6E-41 333.9 26.0 256 673-961 1-285 (285)
139 cd05633 STKc_GRK3 Catalytic do 100.0 4.5E-36 9.8E-41 331.6 27.9 260 679-970 1-267 (279)
140 PTZ00266 NIMA-related protein 100.0 1.8E-36 3.9E-41 369.9 27.1 264 669-966 10-303 (1021)
141 PHA03207 serine/threonine kina 100.0 1.6E-36 3.5E-41 351.6 25.3 262 670-971 90-388 (392)
142 cd05579 STKc_MAST_like Catalyt 100.0 2.1E-36 4.6E-41 330.0 24.7 265 680-966 1-265 (265)
143 KOG2345 Serine/threonine prote 100.0 4.9E-38 1.1E-42 316.3 10.6 266 668-958 17-296 (302)
144 cd05611 STKc_Rim15_like Cataly 100.0 3.8E-36 8.2E-41 328.1 26.0 256 678-967 2-260 (260)
145 cd06615 PKc_MEK Catalytic doma 100.0 4.9E-36 1.1E-40 336.3 27.6 256 672-964 1-293 (308)
146 KOG0604 MAP kinase-activated p 100.0 2.3E-37 4.9E-42 318.2 15.1 253 671-963 60-327 (400)
147 PHA03211 serine/threonine kina 100.0 3E-36 6.4E-41 352.9 26.5 254 670-963 167-460 (461)
148 cd06643 STKc_SLK Catalytic dom 100.0 7.1E-36 1.5E-40 330.2 27.8 257 673-964 6-268 (282)
149 cd06654 STKc_PAK1 Catalytic do 100.0 6.1E-36 1.3E-40 333.5 27.4 264 662-964 12-276 (296)
150 cd08221 STKc_Nek9 Catalytic do 100.0 9E-36 2E-40 324.2 28.1 256 673-961 1-256 (256)
151 PHA02988 hypothetical protein; 100.0 4.6E-36 1E-40 332.2 25.8 244 678-955 26-276 (283)
152 cd06628 STKc_MAPKKK_Byr2_like 100.0 9.8E-36 2.1E-40 326.0 28.0 261 673-961 1-267 (267)
153 cd06645 STKc_MAP4K3 Catalytic 100.0 4.8E-36 1E-40 328.6 25.3 254 671-960 8-267 (267)
154 cd06656 STKc_PAK3 Catalytic do 100.0 4.6E-36 1E-40 334.6 25.6 256 672-964 19-275 (297)
155 cd06610 STKc_OSR1_SPAK Catalyt 100.0 6.5E-36 1.4E-40 326.9 26.3 261 672-961 1-267 (267)
156 PHA03209 serine/threonine kina 100.0 2.1E-36 4.6E-41 346.3 23.2 252 670-964 64-357 (357)
157 cd06636 STKc_MAP4K4_6 Catalyti 100.0 5.6E-36 1.2E-40 331.0 25.9 256 671-961 15-282 (282)
158 cd06655 STKc_PAK2 Catalytic do 100.0 9.1E-36 2E-40 332.1 27.4 265 661-964 10-275 (296)
159 cd08218 STKc_Nek1 Catalytic do 100.0 8.3E-36 1.8E-40 324.5 26.4 256 673-961 1-256 (256)
160 KOG0695 Serine/threonine prote 100.0 5E-37 1.1E-41 318.3 15.8 276 665-971 243-529 (593)
161 cd05061 PTKc_InsR Catalytic do 100.0 1.2E-35 2.5E-40 329.7 27.6 271 668-966 2-288 (288)
162 cd05606 STKc_beta_ARK Catalyti 100.0 1.2E-35 2.6E-40 327.9 27.5 260 679-975 1-272 (278)
163 KOG0671 LAMMER dual specificit 100.0 1.6E-37 3.5E-42 330.6 11.4 263 662-964 80-412 (415)
164 cd06646 STKc_MAP4K5 Catalytic 100.0 7.6E-36 1.6E-40 327.1 25.0 254 671-960 8-267 (267)
165 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.1E-35 2.5E-40 328.8 26.6 256 672-961 1-286 (286)
166 cd06631 STKc_YSK4 Catalytic do 100.0 1.6E-35 3.4E-40 324.2 27.3 261 673-961 1-265 (265)
167 cd07832 STKc_CCRK Catalytic do 100.0 1.6E-35 3.5E-40 327.6 27.2 257 673-962 1-286 (286)
168 cd07868 STKc_CDK8 Catalytic do 100.0 1.1E-35 2.3E-40 334.7 25.8 251 677-961 6-317 (317)
169 cd05578 STKc_Yank1 Catalytic d 100.0 4.6E-36 1E-40 327.0 22.0 255 673-961 1-258 (258)
170 cd08220 STKc_Nek8 Catalytic do 100.0 2.1E-35 4.6E-40 320.9 27.0 255 673-961 1-256 (256)
171 cd06651 STKc_MEKK3 Catalytic d 100.0 2.4E-35 5.2E-40 323.2 27.5 259 673-962 3-265 (266)
172 cd07839 STKc_CDK5 Catalytic do 100.0 5.4E-36 1.2E-40 331.3 22.2 255 673-961 1-284 (284)
173 cd06612 STKc_MST1_2 Catalytic 100.0 2.1E-35 4.6E-40 320.9 26.1 253 672-961 3-256 (256)
174 KOG1989 ARK protein kinase fam 100.0 1.4E-36 3E-41 356.2 17.8 272 669-965 34-322 (738)
175 cd06613 STKc_MAP4K3_like Catal 100.0 2.4E-35 5.2E-40 321.7 26.5 254 672-960 3-262 (262)
176 cd06605 PKc_MAPKK Catalytic do 100.0 1E-35 2.2E-40 325.4 23.6 257 672-964 1-263 (265)
177 KOG0662 Cyclin-dependent kinas 100.0 2.8E-36 6E-41 288.6 16.6 259 672-964 2-289 (292)
178 cd07860 STKc_CDK2_3 Catalytic 100.0 1.4E-35 3E-40 328.1 24.9 256 673-961 1-284 (284)
179 KOG4279 Serine/threonine prote 100.0 9.4E-37 2E-41 340.9 15.0 248 679-963 582-837 (1226)
180 cd06652 STKc_MEKK2 Catalytic d 100.0 4.1E-35 8.9E-40 321.0 27.6 260 672-962 2-265 (265)
181 cd05064 PTKc_EphR_A10 Catalyti 100.0 2.5E-35 5.4E-40 323.2 25.9 254 669-956 2-259 (266)
182 cd05048 PTKc_Ror Catalytic Dom 100.0 2.4E-35 5.1E-40 326.0 25.9 258 669-958 2-279 (283)
183 cd05610 STKc_MASTL Catalytic d 100.0 4.4E-35 9.6E-40 359.7 30.9 151 671-823 3-153 (669)
184 cd08219 STKc_Nek3 Catalytic do 100.0 3.5E-35 7.5E-40 319.5 26.6 252 673-958 1-252 (255)
185 KOG4721 Serine/threonine prote 100.0 5.3E-37 1.2E-41 337.1 12.3 250 667-962 119-368 (904)
186 cd06608 STKc_myosinIII_like Ca 100.0 2.5E-35 5.4E-40 323.6 25.5 256 671-961 5-275 (275)
187 cd06658 STKc_PAK5 Catalytic do 100.0 1.4E-35 3E-40 329.9 23.8 268 672-984 22-290 (292)
188 cd07850 STKc_JNK Catalytic dom 100.0 2.4E-35 5.2E-40 337.2 26.0 255 671-963 15-316 (353)
189 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 2.7E-35 5.9E-40 326.0 25.4 258 669-963 2-271 (284)
190 cd07845 STKc_CDK10 Catalytic d 100.0 3E-35 6.5E-40 329.9 26.0 264 670-967 5-299 (309)
191 KOG0584 Serine/threonine prote 100.0 1.4E-36 3E-41 342.0 14.9 253 675-964 43-302 (632)
192 cd05106 PTKc_CSF-1R Catalytic 100.0 1.5E-35 3.3E-40 341.0 24.0 256 669-951 35-365 (374)
193 cd05052 PTKc_Abl Catalytic dom 100.0 4.7E-35 1E-39 320.3 26.5 251 669-950 3-254 (263)
194 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 2.8E-35 6E-40 326.1 24.9 257 672-964 1-268 (286)
195 cd05096 PTKc_DDR1 Catalytic do 100.0 4.8E-35 1E-39 327.5 26.9 254 671-955 4-298 (304)
196 cd05104 PTKc_Kit Catalytic dom 100.0 2.3E-35 5E-40 339.8 25.0 258 669-957 32-369 (375)
197 KOG0193 Serine/threonine prote 100.0 1.7E-36 3.6E-41 338.6 14.6 264 665-959 385-654 (678)
198 cd05072 PTKc_Lyn Catalytic dom 100.0 4.2E-35 9.2E-40 320.0 25.5 250 668-949 2-252 (261)
199 cd06648 STKc_PAK_II Catalytic 100.0 6.8E-35 1.5E-39 323.2 27.5 255 673-964 20-275 (285)
200 cd06630 STKc_MEKK1 Catalytic d 100.0 3.6E-35 7.8E-40 321.6 25.0 261 673-962 1-268 (268)
201 KOG0586 Serine/threonine prote 100.0 4E-36 8.6E-41 338.2 17.5 265 666-967 50-315 (596)
202 cd06617 PKc_MKK3_6 Catalytic d 100.0 4.6E-35 9.9E-40 323.6 25.5 261 672-967 1-270 (283)
203 cd06623 PKc_MAPKK_plant_like C 100.0 5.8E-35 1.2E-39 318.9 26.0 258 672-965 1-263 (264)
204 cd06607 STKc_TAO Catalytic dom 100.0 7.4E-35 1.6E-39 326.5 27.4 257 672-965 15-274 (307)
205 cd06640 STKc_MST4 Catalytic do 100.0 6.7E-35 1.4E-39 321.7 26.4 258 672-966 4-261 (277)
206 cd06632 STKc_MEKK1_plant Catal 100.0 9.7E-35 2.1E-39 315.9 27.3 255 673-961 1-258 (258)
207 cd06639 STKc_myosinIIIB Cataly 100.0 9.5E-35 2.1E-39 322.8 27.4 257 671-962 21-291 (291)
208 cd07846 STKc_CDKL2_3 Catalytic 100.0 2.8E-35 6E-40 325.8 22.9 256 672-961 1-286 (286)
209 PLN00009 cyclin-dependent kina 100.0 7.4E-35 1.6E-39 324.2 26.1 261 672-965 2-291 (294)
210 cd06638 STKc_myosinIIIA Cataly 100.0 6.7E-35 1.4E-39 323.0 25.6 256 671-961 17-286 (286)
211 cd06629 STKc_MAPKKK_Bck1_like 100.0 9.3E-35 2E-39 319.4 26.5 258 673-961 2-272 (272)
212 cd06917 STKc_NAK1_like Catalyt 100.0 6.1E-35 1.3E-39 321.7 25.1 257 673-965 2-262 (277)
213 cd06642 STKc_STK25-YSK1 Cataly 100.0 2E-35 4.3E-40 325.8 21.1 257 672-965 4-260 (277)
214 cd05054 PTKc_VEGFR Catalytic d 100.0 4.8E-35 1E-39 332.3 24.7 261 667-958 2-329 (337)
215 cd07841 STKc_CDK7 Catalytic do 100.0 5.8E-35 1.3E-39 325.6 24.9 259 673-964 1-288 (298)
216 cd08228 STKc_Nek6 Catalytic do 100.0 8.9E-35 1.9E-39 318.5 25.9 255 672-957 2-260 (267)
217 cd07844 STKc_PCTAIRE_like Cata 100.0 7.2E-35 1.6E-39 323.6 25.5 256 671-961 4-291 (291)
218 PRK13184 pknD serine/threonine 100.0 8.3E-35 1.8E-39 354.2 27.9 271 672-951 2-282 (932)
219 cd06626 STKc_MEKK4 Catalytic d 100.0 1.8E-34 3.9E-39 315.1 28.0 259 673-961 1-264 (264)
220 cd08217 STKc_Nek2 Catalytic do 100.0 1.4E-34 3E-39 315.6 26.9 256 673-961 1-265 (265)
221 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 1.7E-34 3.7E-39 320.2 28.0 259 672-965 1-273 (287)
222 cd05581 STKc_PDK1 Catalytic do 100.0 5.7E-35 1.2E-39 321.8 23.9 279 672-961 1-280 (280)
223 cd06633 STKc_TAO3 Catalytic do 100.0 3E-34 6.4E-39 322.6 30.0 258 673-967 22-282 (313)
224 cd05049 PTKc_Trk Catalytic dom 100.0 1E-34 2.2E-39 320.3 25.6 256 670-957 3-276 (280)
225 cd08225 STKc_Nek5 Catalytic do 100.0 1E-34 2.2E-39 315.9 25.1 256 673-961 1-257 (257)
226 cd08215 STKc_Nek Catalytic dom 100.0 1.8E-34 4E-39 313.1 26.8 256 673-961 1-258 (258)
227 cd07837 STKc_CdkB_plant Cataly 100.0 1.2E-34 2.6E-39 322.4 25.9 258 672-962 1-295 (295)
228 cd06659 STKc_PAK6 Catalytic do 100.0 7.8E-35 1.7E-39 324.8 24.3 257 672-965 21-278 (297)
229 cd08229 STKc_Nek7 Catalytic do 100.0 1.2E-34 2.6E-39 317.5 25.2 252 672-950 2-257 (267)
230 cd06614 STKc_PAK Catalytic dom 100.0 1.7E-34 3.7E-39 319.9 26.8 258 671-964 18-276 (286)
231 cd06647 STKc_PAK_I Catalytic d 100.0 5.6E-35 1.2E-39 325.3 22.8 257 671-964 18-275 (293)
232 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.6E-34 3.5E-39 314.6 25.9 251 670-957 2-253 (256)
233 PHA03210 serine/threonine kina 100.0 2.5E-35 5.5E-40 351.2 21.2 268 671-969 147-465 (501)
234 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.4E-34 3.1E-39 334.8 26.6 258 667-951 32-390 (400)
235 cd07858 STKc_TEY_MAPK_plant Ca 100.0 7.8E-35 1.7E-39 330.8 24.0 259 671-964 4-297 (337)
236 cd05093 PTKc_TrkB Catalytic do 100.0 2.4E-34 5.1E-39 319.3 27.1 253 669-950 2-271 (288)
237 cd05062 PTKc_IGF-1R Catalytic 100.0 1.8E-34 3.9E-39 318.2 25.9 258 669-958 3-274 (277)
238 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.3E-34 2.8E-39 316.1 24.5 248 672-951 6-254 (261)
239 cd07843 STKc_CDC2L1 Catalytic 100.0 1.5E-34 3.2E-39 321.5 25.4 257 671-961 4-293 (293)
240 cd07870 STKc_PFTAIRE2 Catalyti 100.0 2.3E-34 4.9E-39 319.8 26.7 256 671-961 4-291 (291)
241 cd07835 STKc_CDK1_like Catalyt 100.0 1.5E-34 3.2E-39 319.7 25.1 255 674-961 1-283 (283)
242 KOG4236 Serine/threonine prote 100.0 4.1E-36 9E-41 327.2 12.3 257 677-969 569-831 (888)
243 PHA03390 pk1 serine/threonine- 100.0 1.7E-34 3.7E-39 316.9 25.2 248 672-963 14-267 (267)
244 cd05068 PTKc_Frk_like Catalyti 100.0 2.3E-34 5.1E-39 314.3 26.1 250 669-950 3-253 (261)
245 cd07867 STKc_CDC2L6 Catalytic 100.0 1.9E-34 4.1E-39 324.4 26.0 250 678-961 7-317 (317)
246 cd07833 STKc_CDKL Catalytic do 100.0 1.6E-34 3.5E-39 319.9 25.1 257 672-961 1-288 (288)
247 cd05613 STKc_MSK1_N N-terminal 100.0 2.9E-34 6.3E-39 318.7 27.1 268 673-970 1-280 (290)
248 cd06641 STKc_MST3 Catalytic do 100.0 2.3E-34 5E-39 317.4 26.1 254 673-963 5-258 (277)
249 cd06635 STKc_TAO1 Catalytic do 100.0 6.3E-34 1.4E-38 320.5 30.1 255 672-963 25-282 (317)
250 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.7E-34 3.7E-39 328.8 25.6 255 671-964 14-304 (343)
251 cd07842 STKc_CDK8_like Catalyt 100.0 1.5E-34 3.2E-39 324.8 24.8 260 673-961 1-316 (316)
252 cd05108 PTKc_EGFR Catalytic do 100.0 1.9E-34 4.1E-39 324.5 25.5 254 669-952 4-262 (316)
253 cd05032 PTKc_InsR_like Catalyt 100.0 2.4E-34 5.2E-39 316.8 25.5 258 668-957 2-273 (277)
254 cd07849 STKc_ERK1_2_like Catal 100.0 2E-34 4.3E-39 327.3 25.5 260 671-964 4-298 (336)
255 cd07831 STKc_MOK Catalytic dom 100.0 3.1E-34 6.8E-39 316.6 26.3 251 674-961 1-282 (282)
256 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 2.8E-34 6E-39 313.5 25.6 249 668-949 2-251 (260)
257 cd06616 PKc_MKK4 Catalytic dom 100.0 1.3E-34 2.8E-39 321.1 23.3 261 671-966 3-275 (288)
258 cd05055 PTKc_PDGFR Catalytic d 100.0 3.4E-34 7.3E-39 320.4 26.6 256 668-950 31-293 (302)
259 cd05071 PTKc_Src Catalytic dom 100.0 3.2E-34 7E-39 313.6 25.8 248 669-949 3-251 (262)
260 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 4.7E-34 1E-38 312.4 27.0 252 672-950 2-257 (267)
261 cd05090 PTKc_Ror1 Catalytic do 100.0 3.3E-34 7.2E-39 317.1 26.1 256 670-957 3-278 (283)
262 cd06653 STKc_MEKK3_like_1 Cata 100.0 6.4E-34 1.4E-38 311.5 28.0 259 672-961 2-264 (264)
263 cd05583 STKc_MSK_N N-terminal 100.0 3.1E-34 6.8E-39 318.1 25.7 270 673-973 1-281 (288)
264 cd07865 STKc_CDK9 Catalytic do 100.0 3.1E-34 6.7E-39 321.2 25.9 261 671-961 11-310 (310)
265 cd05067 PTKc_Lck_Blk Catalytic 100.0 2.8E-34 6.2E-39 313.4 24.9 252 668-956 2-254 (260)
266 cd07834 STKc_MAPK Catalytic do 100.0 1.9E-34 4.1E-39 326.5 24.2 260 673-964 1-295 (330)
267 cd07836 STKc_Pho85 Catalytic d 100.0 3.2E-34 7E-39 317.0 25.3 255 673-961 1-284 (284)
268 cd05123 STKc_AGC Catalytic dom 100.0 3.8E-34 8.1E-39 310.0 25.3 250 680-961 1-250 (250)
269 cd07855 STKc_ERK5 Catalytic do 100.0 1.3E-34 2.7E-39 328.7 22.5 266 672-968 5-304 (334)
270 cd06624 STKc_ASK Catalytic dom 100.0 6.4E-34 1.4E-38 312.1 27.3 254 673-961 9-268 (268)
271 cd08226 PK_STRAD_beta Pseudoki 100.0 2.6E-34 5.7E-39 325.2 24.8 262 678-964 4-314 (328)
272 cd05113 PTKc_Btk_Bmx Catalytic 100.0 3.1E-34 6.8E-39 312.6 24.6 251 671-958 3-254 (256)
273 cd05036 PTKc_ALK_LTK Catalytic 100.0 4.6E-34 9.9E-39 315.0 26.0 257 670-958 4-274 (277)
274 cd05088 PTKc_Tie2 Catalytic do 100.0 2.9E-34 6.2E-39 321.2 24.6 255 669-958 4-276 (303)
275 cd05053 PTKc_FGFR Catalytic do 100.0 3.2E-34 6.8E-39 318.8 24.8 261 665-957 5-286 (293)
276 cd06657 STKc_PAK4 Catalytic do 100.0 4.8E-34 1E-38 317.6 25.8 255 673-964 21-276 (292)
277 cd06606 STKc_MAPKKK Catalytic 100.0 8.3E-34 1.8E-38 307.9 27.0 257 673-961 1-260 (260)
278 cd05082 PTKc_Csk Catalytic dom 100.0 4.6E-34 1E-38 311.0 25.0 247 668-956 2-250 (256)
279 cd05091 PTKc_Ror2 Catalytic do 100.0 4E-34 8.6E-39 316.4 24.8 257 669-957 2-278 (283)
280 cd05084 PTKc_Fes Catalytic dom 100.0 8.5E-34 1.8E-38 308.0 27.0 246 678-956 1-247 (252)
281 cd05059 PTKc_Tec_like Catalyti 100.0 4.6E-34 9.9E-39 311.1 24.9 250 671-957 3-253 (256)
282 cd05033 PTKc_EphR Catalytic do 100.0 7.6E-34 1.6E-38 311.2 26.6 254 671-957 3-260 (266)
283 cd06634 STKc_TAO2 Catalytic do 100.0 6.8E-34 1.5E-38 318.9 26.6 256 672-964 15-273 (308)
284 cd08530 STKc_CNK2-like Catalyt 100.0 6.6E-34 1.4E-38 309.0 25.5 254 673-961 1-256 (256)
285 cd05034 PTKc_Src_like Catalyti 100.0 8E-34 1.7E-38 309.8 26.1 253 668-956 2-255 (261)
286 cd05122 PKc_STE Catalytic doma 100.0 1.3E-33 2.7E-38 305.1 27.3 252 673-960 1-253 (253)
287 cd07854 STKc_MAPK4_6 Catalytic 100.0 5.4E-34 1.2E-38 324.6 25.6 259 671-964 4-306 (342)
288 cd06627 STKc_Cdc7_like Catalyt 100.0 1.5E-33 3.3E-38 305.6 28.0 254 673-961 1-254 (254)
289 KOG0666 Cyclin C-dependent kin 100.0 4.2E-35 9.1E-40 302.6 14.4 264 671-964 23-343 (438)
290 cd05051 PTKc_DDR Catalytic dom 100.0 8E-34 1.7E-38 315.9 25.9 257 670-957 3-292 (296)
291 cd05069 PTKc_Yes Catalytic dom 100.0 8.9E-34 1.9E-38 309.6 25.7 251 669-956 3-254 (260)
292 cd07851 STKc_p38 Catalytic dom 100.0 3.2E-34 7E-39 326.5 22.9 278 671-993 14-327 (343)
293 cd08216 PK_STRAD Pseudokinase 100.0 6.5E-34 1.4E-38 319.7 25.0 256 684-964 12-301 (314)
294 cd07838 STKc_CDK4_6_like Catal 100.0 9.7E-34 2.1E-38 313.4 26.0 254 674-961 1-287 (287)
295 cd05035 PTKc_Axl_like Catalyti 100.0 1.1E-33 2.3E-38 310.7 26.0 253 674-957 1-267 (273)
296 cd00192 PTKc Catalytic domain 100.0 1.3E-33 2.8E-38 307.2 26.4 249 678-958 1-260 (262)
297 cd05094 PTKc_TrkC Catalytic do 100.0 9.6E-34 2.1E-38 314.9 25.8 256 671-955 4-279 (291)
298 cd05039 PTKc_Csk_like Catalyti 100.0 1.6E-33 3.5E-38 306.6 27.0 245 669-950 3-248 (256)
299 cd05092 PTKc_TrkA Catalytic do 100.0 1.2E-33 2.6E-38 312.2 26.0 253 669-950 2-273 (280)
300 KOG0194 Protein tyrosine kinas 100.0 1.7E-34 3.6E-39 327.8 19.4 263 664-955 149-417 (474)
301 cd05116 PTKc_Syk Catalytic dom 100.0 1.8E-33 3.8E-38 306.7 26.8 248 679-955 2-252 (257)
302 cd05066 PTKc_EphR_A Catalytic 100.0 1.3E-33 2.9E-38 309.5 25.7 252 671-950 3-258 (267)
303 cd05040 PTKc_Ack_like Catalyti 100.0 2E-33 4.3E-38 305.9 26.7 248 678-956 1-252 (257)
304 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.2E-33 2.6E-38 316.6 25.7 259 667-953 13-294 (307)
305 cd07877 STKc_p38alpha_MAPK14 C 100.0 8.4E-34 1.8E-38 323.4 24.7 255 671-964 16-306 (345)
306 cd05075 PTKc_Axl Catalytic dom 100.0 2E-33 4.4E-38 308.5 26.6 253 674-957 1-266 (272)
307 cd05109 PTKc_HER2 Catalytic do 100.0 2.2E-33 4.7E-38 309.9 26.9 254 669-956 4-262 (279)
308 cd05089 PTKc_Tie1 Catalytic do 100.0 1.8E-33 4E-38 313.6 26.5 249 672-951 2-268 (297)
309 cd05073 PTKc_Hck Catalytic dom 100.0 2.3E-33 4.9E-38 306.4 26.6 250 668-950 2-252 (260)
310 cd07879 STKc_p38delta_MAPK13 C 100.0 7.7E-34 1.7E-38 323.3 23.7 256 672-967 15-306 (342)
311 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.8E-33 3.9E-38 325.4 27.1 258 667-951 32-392 (401)
312 PTZ00024 cyclin-dependent prot 100.0 1.9E-33 4.1E-38 319.1 26.6 274 672-965 8-320 (335)
313 cd07857 STKc_MPK1 Catalytic do 100.0 2.5E-33 5.5E-38 317.7 27.5 261 673-964 1-298 (332)
314 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 2.4E-33 5.2E-38 317.3 27.2 254 671-963 9-293 (328)
315 PF07714 Pkinase_Tyr: Protein 100.0 8E-34 1.7E-38 310.1 22.5 250 675-956 2-256 (259)
316 cd05097 PTKc_DDR_like Catalyti 100.0 1.7E-33 3.6E-38 313.6 25.4 253 671-950 4-288 (295)
317 cd05101 PTKc_FGFR2 Catalytic d 100.0 2.3E-33 5E-38 313.9 26.4 256 668-951 11-289 (304)
318 cd05046 PTK_CCK4 Pseudokinase 100.0 2E-33 4.4E-38 309.2 25.4 256 671-958 4-272 (275)
319 cd05050 PTKc_Musk Catalytic do 100.0 2.4E-33 5.2E-38 311.0 26.0 253 670-950 3-281 (288)
320 cd05118 STKc_CMGC Catalytic do 100.0 1.1E-33 2.4E-38 312.3 23.2 254 674-961 1-283 (283)
321 cd05103 PTKc_VEGFR2 Catalytic 100.0 1.7E-33 3.7E-38 320.6 25.2 259 669-958 4-335 (343)
322 cd05060 PTKc_Syk_like Catalyti 100.0 3.7E-33 8E-38 304.1 26.8 246 678-953 1-250 (257)
323 cd06618 PKc_MKK7 Catalytic dom 100.0 2.3E-33 4.9E-38 312.7 25.6 262 667-964 10-279 (296)
324 cd05065 PTKc_EphR_B Catalytic 100.0 2.6E-33 5.6E-38 307.5 25.7 257 671-957 3-263 (269)
325 cd07840 STKc_CDK9_like Catalyt 100.0 2.3E-33 4.9E-38 310.2 25.4 255 674-961 1-287 (287)
326 cd05111 PTK_HER3 Pseudokinase 100.0 3.7E-33 8E-38 308.3 26.7 252 670-951 5-261 (279)
327 cd05063 PTKc_EphR_A2 Catalytic 100.0 3.4E-33 7.4E-38 306.2 26.2 254 670-951 3-260 (268)
328 cd07866 STKc_BUR1 Catalytic do 100.0 1.6E-33 3.5E-38 315.6 24.0 268 671-961 7-311 (311)
329 cd07864 STKc_CDK12 Catalytic d 100.0 2E-33 4.3E-38 313.7 24.7 258 671-961 6-302 (302)
330 cd05045 PTKc_RET Catalytic dom 100.0 3.8E-33 8.3E-38 309.8 26.8 251 673-951 1-279 (290)
331 KOG1026 Nerve growth factor re 100.0 2.5E-34 5.4E-39 335.4 17.7 255 669-951 483-755 (774)
332 cd07852 STKc_MAPK15 Catalytic 100.0 2E-33 4.3E-38 319.2 24.8 263 671-964 6-301 (337)
333 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 4.2E-33 9.2E-38 308.3 26.2 250 672-950 3-273 (283)
334 cd05099 PTKc_FGFR4 Catalytic d 100.0 4.6E-33 1E-37 313.0 26.8 255 668-950 8-285 (314)
335 cd08222 STKc_Nek11 Catalytic d 100.0 1.6E-33 3.5E-38 307.3 22.4 256 673-961 1-260 (260)
336 KOG4645 MAPKKK (MAP kinase kin 100.0 1.6E-35 3.6E-40 353.5 7.1 261 672-964 1235-1500(1509)
337 cd05095 PTKc_DDR2 Catalytic do 100.0 4.1E-33 9E-38 310.6 25.7 256 671-953 4-292 (296)
338 cd05083 PTKc_Chk Catalytic dom 100.0 3.4E-33 7.3E-38 303.9 24.2 242 670-950 4-246 (254)
339 cd05115 PTKc_Zap-70 Catalytic 100.0 8.4E-33 1.8E-37 301.6 27.3 244 679-951 2-248 (257)
340 cd05100 PTKc_FGFR3 Catalytic d 100.0 4.5E-33 9.7E-38 316.0 25.9 262 666-955 6-290 (334)
341 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 7.9E-33 1.7E-37 306.2 26.8 255 671-957 3-278 (284)
342 KOG1151 Tousled-like protein k 100.0 3.2E-34 6.9E-39 306.9 14.7 268 670-963 461-746 (775)
343 KOG0603 Ribosomal protein S6 k 100.0 8.7E-34 1.9E-38 321.0 18.8 244 670-961 320-566 (612)
344 cd05112 PTKc_Itk Catalytic dom 100.0 7.4E-33 1.6E-37 301.3 25.5 250 671-957 3-253 (256)
345 cd05057 PTKc_EGFR_like Catalyt 100.0 1.1E-32 2.3E-37 304.4 26.9 255 670-954 5-264 (279)
346 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 5.7E-33 1.2E-37 307.5 24.7 255 672-957 4-278 (284)
347 cd07830 STKc_MAK_like Catalyti 100.0 5.4E-33 1.2E-37 307.0 24.4 253 674-961 1-283 (283)
348 cd07829 STKc_CDK_like Catalyti 100.0 4.6E-33 9.9E-38 307.2 23.7 254 674-961 1-282 (282)
349 KOG1035 eIF-2alpha kinase GCN2 100.0 7.8E-34 1.7E-38 338.0 18.3 273 670-962 477-875 (1351)
350 smart00219 TyrKc Tyrosine kina 100.0 1.1E-32 2.4E-37 299.6 26.0 251 674-957 1-256 (258)
351 cd05085 PTKc_Fer Catalytic dom 100.0 1.9E-32 4.1E-37 296.9 27.7 245 678-953 1-246 (250)
352 cd05041 PTKc_Fes_like Catalyti 100.0 1.4E-32 3.1E-37 298.1 26.3 246 678-957 1-247 (251)
353 cd05043 PTK_Ryk Pseudokinase d 100.0 1.3E-32 2.9E-37 303.6 26.0 255 669-951 3-269 (280)
354 cd05056 PTKc_FAK Catalytic dom 100.0 1.3E-32 2.8E-37 302.1 25.6 252 670-956 4-259 (270)
355 KOG1187 Serine/threonine prote 100.0 3.6E-33 7.7E-38 315.8 21.4 252 671-955 74-349 (361)
356 cd05047 PTKc_Tie Catalytic dom 100.0 1.9E-32 4.1E-37 301.0 26.4 244 678-952 1-262 (270)
357 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 5.1E-33 1.1E-37 303.4 21.4 238 678-957 1-255 (258)
358 cd05576 STKc_RPK118_like Catal 100.0 5.8E-33 1.3E-37 299.1 21.0 233 683-961 4-237 (237)
359 cd05110 PTKc_HER4 Catalytic do 100.0 1.7E-32 3.6E-37 306.9 25.2 256 669-954 4-264 (303)
360 cd05044 PTKc_c-ros Catalytic d 100.0 1.2E-32 2.7E-37 301.8 23.4 245 678-950 1-262 (269)
361 cd08528 STKc_Nek10 Catalytic d 100.0 2.6E-32 5.7E-37 299.3 26.0 250 673-950 1-262 (269)
362 KOG1095 Protein tyrosine kinas 100.0 6E-33 1.3E-37 335.1 21.7 257 670-954 690-957 (1025)
363 cd05042 PTKc_Aatyk Catalytic d 100.0 4.5E-32 9.7E-37 297.7 26.3 245 678-950 1-262 (269)
364 cd05058 PTKc_Met_Ron Catalytic 100.0 5.9E-32 1.3E-36 295.3 27.0 249 678-957 1-254 (262)
365 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 3E-32 6.6E-37 300.9 24.9 257 671-954 3-279 (284)
366 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 5.9E-32 1.3E-36 296.8 25.8 247 678-956 1-264 (269)
367 KOG0668 Casein kinase II, alph 100.0 2.6E-33 5.6E-38 278.1 13.1 253 670-965 36-329 (338)
368 cd05074 PTKc_Tyro3 Catalytic d 100.0 6.5E-32 1.4E-36 296.8 25.1 253 674-957 1-267 (273)
369 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 6.6E-32 1.4E-36 297.5 24.8 238 679-958 2-272 (274)
370 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 8.2E-32 1.8E-36 294.7 25.1 239 678-958 1-260 (262)
371 KOG1290 Serine/threonine prote 100.0 1.9E-32 4.1E-37 298.6 19.5 143 662-809 68-223 (590)
372 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 8E-32 1.7E-36 293.3 24.2 236 678-957 1-256 (259)
373 KOG0669 Cyclin T-dependent kin 100.0 4E-34 8.7E-39 287.4 5.4 264 670-963 15-320 (376)
374 KOG0670 U4/U6-associated splic 100.0 1.7E-33 3.7E-38 307.3 9.7 257 669-963 429-751 (752)
375 KOG0665 Jun-N-terminal kinase 100.0 5.4E-33 1.2E-37 289.6 12.9 253 671-962 16-314 (369)
376 KOG0587 Traf2- and Nck-interac 100.0 2.5E-32 5.5E-37 316.2 19.9 260 671-965 18-289 (953)
377 PHA02882 putative serine/threo 100.0 1.9E-31 4.1E-36 297.1 25.7 259 669-957 9-291 (294)
378 KOG1006 Mitogen-activated prot 100.0 1.1E-33 2.4E-38 286.8 6.7 264 669-967 61-336 (361)
379 cd05086 PTKc_Aatyk2 Catalytic 100.0 3.4E-31 7.3E-36 290.8 26.4 248 678-957 1-264 (268)
380 KOG0199 ACK and related non-re 100.0 3.7E-32 8.1E-37 305.5 16.8 258 671-956 109-370 (1039)
381 KOG4278 Protein tyrosine kinas 100.0 1.1E-31 2.4E-36 297.1 17.8 263 666-960 261-524 (1157)
382 KOG1094 Discoidin domain recep 100.0 2.3E-31 5E-36 294.5 18.9 254 669-950 535-796 (807)
383 KOG0664 Nemo-like MAPK-related 100.0 5E-33 1.1E-37 282.0 5.3 281 673-987 54-377 (449)
384 PLN03225 Serine/threonine-prot 100.0 4E-31 8.7E-36 316.9 22.6 263 670-971 130-463 (566)
385 KOG4250 TANK binding protein k 100.0 1.1E-31 2.4E-36 305.9 15.0 245 672-946 13-296 (732)
386 KOG4257 Focal adhesion tyrosin 100.0 3.7E-31 8.1E-36 294.0 17.5 248 672-950 389-641 (974)
387 smart00220 S_TKc Serine/Threon 100.0 3.4E-30 7.3E-35 276.2 24.2 242 684-961 1-244 (244)
388 PLN03224 probable serine/threo 100.0 4.5E-30 9.7E-35 300.4 25.3 266 668-963 141-505 (507)
389 KOG0196 Tyrosine kinase, EPH ( 100.0 1.7E-31 3.7E-36 304.6 12.4 266 666-959 623-895 (996)
390 PRK13560 hypothetical protein; 100.0 3.7E-30 8.1E-35 326.5 25.6 412 171-624 183-621 (807)
391 KOG1167 Serine/threonine prote 100.0 9E-31 1.9E-35 283.2 13.1 293 658-965 23-388 (418)
392 KOG0984 Mitogen-activated prot 100.0 5.7E-30 1.2E-34 251.2 13.9 226 665-921 39-273 (282)
393 KOG1027 Serine/threonine prote 100.0 5.8E-30 1.3E-34 295.4 12.4 252 673-963 510-772 (903)
394 KOG1025 Epidermal growth facto 100.0 3.9E-29 8.4E-34 285.8 17.6 253 673-955 697-954 (1177)
395 KOG1152 Signal transduction se 100.0 2.3E-29 4.9E-34 278.7 10.5 203 670-903 559-771 (772)
396 KOG0576 Mitogen-activated prot 100.0 1.2E-29 2.6E-34 285.4 7.6 286 671-992 14-310 (829)
397 PLN00113 leucine-rich repeat r 100.0 6.1E-28 1.3E-32 311.8 20.0 238 673-954 691-947 (968)
398 KOG0200 Fibroblast/platelet-de 100.0 4.3E-27 9.4E-32 284.9 23.3 263 667-958 291-579 (609)
399 KOG2052 Activin A type IB rece 99.9 2.7E-27 5.8E-32 256.5 18.3 243 672-948 211-493 (513)
400 KOG3653 Transforming growth fa 99.9 1.5E-27 3.2E-32 260.3 16.1 244 670-949 208-494 (534)
401 PRK09776 putative diguanylate 99.9 2.3E-27 5E-32 310.9 19.3 380 179-597 270-659 (1092)
402 cd00180 PKc Catalytic domain o 99.9 1.4E-25 3.1E-30 234.1 23.4 213 680-959 1-215 (215)
403 smart00221 STYKc Protein kinas 99.9 6E-25 1.3E-29 233.2 22.2 215 674-917 1-218 (225)
404 KOG1345 Serine/threonine kinas 99.9 2.2E-26 4.9E-31 234.3 10.1 255 671-963 23-292 (378)
405 TIGR02040 PpsR-CrtJ transcript 99.9 4.8E-25 1E-29 259.8 17.0 359 198-595 2-367 (442)
406 PLN00181 protein SPA1-RELATED; 99.9 2.4E-25 5.1E-30 280.4 13.1 227 729-964 29-271 (793)
407 KOG1024 Receptor-like protein 99.9 4.3E-24 9.3E-29 227.2 16.6 254 669-950 281-547 (563)
408 PRK13560 hypothetical protein; 99.9 9.5E-24 2.1E-28 268.0 22.7 379 178-595 53-468 (807)
409 KOG1163 Casein kinase (serine/ 99.9 4.6E-24 1E-28 214.2 14.2 274 668-969 11-301 (341)
410 KOG1165 Casein kinase (serine/ 99.9 1.6E-23 3.5E-28 219.2 17.2 256 666-948 22-289 (449)
411 KOG0603 Ribosomal protein S6 k 99.9 7.7E-25 1.7E-29 248.6 5.6 262 679-982 1-267 (612)
412 smart00750 KIND kinase non-cat 99.9 1.6E-23 3.4E-28 214.6 11.6 161 757-962 1-169 (176)
413 KOG0590 Checkpoint kinase and 99.9 9.2E-24 2E-28 252.6 6.3 261 675-965 321-592 (601)
414 KOG1164 Casein kinase (serine/ 99.9 2.7E-21 5.9E-26 217.9 23.3 254 673-950 19-289 (322)
415 KOG0606 Microtubule-associated 99.9 8.7E-23 1.9E-27 241.7 11.4 242 672-969 83-326 (1205)
416 COG0515 SPS1 Serine/threonine 99.9 1.3E-20 2.8E-25 209.9 26.5 262 674-963 2-280 (384)
417 PRK09188 serine/threonine prot 99.9 8.3E-22 1.8E-26 221.7 16.5 177 667-875 13-194 (365)
418 PRK11359 cyclic-di-GMP phospho 99.9 4.2E-20 9E-25 234.5 26.5 241 189-595 9-254 (799)
419 KOG1240 Protein kinase contain 99.8 6E-22 1.3E-26 234.3 6.9 270 673-976 24-316 (1431)
420 TIGR02938 nifL_nitrog nitrogen 99.8 3.8E-21 8.2E-26 229.4 12.7 244 191-598 3-257 (494)
421 PRK10359 lipopolysaccharide co 99.8 2.7E-20 5.8E-25 195.0 11.2 176 668-895 27-216 (232)
422 PF14531 Kinase-like: Kinase-l 99.8 3.5E-20 7.7E-25 199.8 11.0 236 673-945 13-288 (288)
423 cd05147 RIO1_euk RIO kinase fa 99.8 1.6E-19 3.4E-24 187.0 12.8 141 677-823 2-166 (190)
424 KOG0195 Integrin-linked kinase 99.8 2.3E-19 4.9E-24 182.9 8.4 244 669-949 187-437 (448)
425 cd05145 RIO1_like RIO kinase f 99.8 2.6E-18 5.7E-23 178.4 15.8 143 677-825 2-168 (190)
426 KOG4158 BRPK/PTEN-induced prot 99.8 8.1E-19 1.8E-23 187.7 11.7 205 730-961 274-516 (598)
427 PRK12274 serine/threonine prot 99.7 2.1E-17 4.5E-22 169.6 16.1 203 674-905 4-211 (218)
428 KOG1166 Mitotic checkpoint ser 99.7 4.2E-18 9.1E-23 207.2 11.2 197 669-899 695-901 (974)
429 PRK10345 hypothetical protein; 99.7 4.1E-17 8.8E-22 170.7 15.1 136 675-821 5-156 (210)
430 smart00090 RIO RIO-like kinase 99.7 1.3E-16 2.8E-21 171.0 13.6 145 673-824 29-198 (237)
431 KOG1033 eIF-2alpha kinase PEK/ 99.7 3.9E-17 8.4E-22 183.0 5.2 185 745-961 329-515 (516)
432 PRK14879 serine/threonine prot 99.7 1.2E-15 2.6E-20 161.2 15.2 138 677-823 1-143 (211)
433 KOG0606 Microtubule-associated 99.6 1.4E-16 3.1E-21 189.6 7.4 298 671-971 803-1105(1205)
434 TIGR03724 arch_bud32 Kae1-asso 99.6 2.6E-15 5.6E-20 157.2 14.9 133 679-823 1-138 (199)
435 PF13426 PAS_9: PAS domain; PD 99.6 5.7E-15 1.2E-19 136.3 14.3 104 202-308 1-104 (104)
436 cd05144 RIO2_C RIO kinase fami 99.6 3.2E-15 7E-20 156.4 13.4 139 673-824 16-175 (198)
437 PF13426 PAS_9: PAS domain; PD 99.6 8.1E-15 1.8E-19 135.2 12.9 104 485-591 1-104 (104)
438 PRK09605 bifunctional UGMP fam 99.6 1E-14 2.2E-19 175.7 15.4 139 672-823 333-476 (535)
439 KOG0590 Checkpoint kinase and 99.6 1.3E-16 2.7E-21 191.4 -1.1 264 671-963 19-291 (601)
440 cd05119 RIO RIO kinase family, 99.6 2.3E-14 5E-19 148.3 13.4 138 677-824 2-164 (187)
441 KOG1023 Natriuretic peptide re 99.6 1.7E-14 3.6E-19 165.4 12.2 199 726-950 1-216 (484)
442 PRK01723 3-deoxy-D-manno-octul 99.5 8.7E-14 1.9E-18 149.5 15.0 137 678-823 37-191 (239)
443 cd05120 APH_ChoK_like Aminogly 99.5 1.8E-13 3.8E-18 135.3 12.9 132 676-823 2-138 (155)
444 PF08448 PAS_4: PAS fold; Int 99.5 2.5E-13 5.4E-18 126.7 12.5 110 198-311 1-110 (110)
445 PF00989 PAS: PAS fold; Inter 99.5 3.1E-13 6.7E-18 126.8 12.8 112 192-306 1-113 (113)
446 PF08448 PAS_4: PAS fold; Int 99.5 2.1E-13 4.6E-18 127.2 10.7 110 481-594 1-110 (110)
447 PRK09776 putative diguanylate 99.5 8.5E-14 1.8E-18 183.1 10.1 269 170-473 388-663 (1092)
448 PF00989 PAS: PAS fold; Inter 99.4 5.2E-13 1.1E-17 125.2 11.4 111 476-589 2-113 (113)
449 PRK13559 hypothetical protein; 99.4 2.7E-12 5.9E-17 147.3 17.6 143 475-623 43-185 (361)
450 PRK13557 histidine kinase; Pro 99.4 2E-12 4.3E-17 156.5 15.0 149 475-623 30-178 (540)
451 PRK13559 hypothetical protein; 99.4 8.5E-12 1.9E-16 143.2 18.9 129 189-317 40-168 (361)
452 PRK11091 aerobic respiration c 99.4 2.3E-12 4.9E-17 163.2 15.5 136 458-596 137-273 (779)
453 PRK13557 histidine kinase; Pro 99.4 3.7E-12 8.1E-17 154.1 16.6 133 185-317 23-155 (540)
454 KOG0601 Cyclin-dependent kinas 99.4 2.7E-13 5.9E-18 155.5 6.1 263 670-965 112-386 (524)
455 PRK11091 aerobic respiration c 99.4 1.7E-12 3.8E-17 164.3 12.7 141 174-317 137-277 (779)
456 TIGR01982 UbiB 2-polyprenylphe 99.3 3.6E-12 7.8E-17 148.7 11.8 185 629-825 75-308 (437)
457 PRK04750 ubiB putative ubiquin 99.3 1.3E-12 2.7E-17 154.0 5.4 209 603-825 57-315 (537)
458 PRK13558 bacterio-opsin activa 99.3 5.8E-11 1.3E-15 147.7 17.3 128 191-318 147-274 (665)
459 TIGR02040 PpsR-CrtJ transcript 99.3 6.7E-12 1.4E-16 148.2 8.4 255 171-468 98-368 (442)
460 KOG1266 Protein kinase [Signal 99.3 6.3E-12 1.4E-16 132.8 7.0 210 725-966 120-339 (458)
461 PRK10060 RNase II stability mo 99.3 5.1E-11 1.1E-15 147.3 16.1 158 177-337 96-259 (663)
462 KOG3087 Serine/threonine prote 99.2 9E-11 2E-15 115.5 12.5 146 676-823 11-165 (229)
463 cd05146 RIO3_euk RIO kinase fa 99.2 2.1E-10 4.5E-15 118.1 15.4 140 677-824 2-174 (197)
464 cd05151 ChoK Choline Kinase (C 99.2 6E-11 1.3E-15 120.6 10.7 127 677-822 3-135 (170)
465 KOG1243 Protein kinase [Genera 99.2 1.8E-10 3.8E-15 133.4 15.4 240 673-967 14-255 (690)
466 KOG0601 Cyclin-dependent kinas 99.2 9.9E-12 2.2E-16 142.7 5.2 253 668-962 261-518 (524)
467 PRK13558 bacterio-opsin activa 99.2 3E-10 6.5E-15 141.4 17.2 121 477-597 150-270 (665)
468 COG3642 Mn2+-dependent serine/ 99.2 2.6E-10 5.6E-15 113.2 12.5 134 678-823 2-140 (204)
469 TIGR02938 nifL_nitrog nitrogen 99.1 1.5E-10 3.2E-15 138.2 10.7 132 477-617 6-137 (494)
470 PRK10060 RNase II stability mo 99.1 7E-10 1.5E-14 137.3 16.7 115 477-595 113-229 (663)
471 TIGR00229 sensory_box PAS doma 99.1 8.2E-10 1.8E-14 100.5 13.0 120 192-315 3-123 (124)
472 PRK11359 cyclic-di-GMP phospho 99.1 6.8E-10 1.5E-14 141.3 14.1 141 170-317 118-259 (799)
473 PF08447 PAS_3: PAS fold; Int 99.0 9.5E-10 2.1E-14 99.2 9.6 86 500-586 1-91 (91)
474 TIGR00229 sensory_box PAS doma 99.0 2.5E-09 5.5E-14 97.2 11.9 115 477-595 5-120 (124)
475 KOG3741 Poly(A) ribonuclease s 99.0 1.2E-08 2.7E-13 114.6 18.0 205 685-944 289-512 (655)
476 PF08447 PAS_3: PAS fold; Int 99.0 3.3E-09 7.1E-14 95.7 9.7 86 217-303 1-91 (91)
477 cd05154 ACAD10_11_like Acyl-Co 99.0 4.6E-09 1E-13 111.5 12.3 140 678-823 4-206 (223)
478 PRK15123 lipopolysaccharide co 98.9 4.9E-08 1.1E-12 106.3 16.5 134 687-822 37-193 (268)
479 COG3829 RocR Transcriptional r 98.8 3.5E-08 7.5E-13 112.6 14.5 221 195-594 4-224 (560)
480 PF01163 RIO1: RIO1 family; I 98.8 2.4E-08 5.2E-13 102.5 12.0 127 687-823 1-155 (188)
481 cd00130 PAS PAS domain; PAS mo 98.8 1.4E-07 3E-12 81.3 13.9 103 484-589 1-103 (103)
482 PRK11073 glnL nitrogen regulat 98.8 2E-08 4.3E-13 114.7 10.9 136 476-621 8-143 (348)
483 cd00130 PAS PAS domain; PAS mo 98.8 1.8E-07 3.9E-12 80.6 13.9 103 201-306 1-103 (103)
484 KOG2137 Protein kinase [Signal 98.8 4.3E-09 9.4E-14 122.6 4.0 171 780-973 105-280 (700)
485 COG4248 Uncharacterized protei 98.8 2E-07 4.3E-12 102.3 16.4 238 676-950 15-292 (637)
486 PRK11360 sensory histidine kin 98.7 8.7E-08 1.9E-12 117.4 14.6 141 476-622 263-404 (607)
487 TIGR02966 phoR_proteo phosphat 98.7 4.8E-08 1E-12 110.1 11.1 114 188-317 2-115 (333)
488 TIGR02966 phoR_proteo phosphat 98.7 8.1E-08 1.8E-12 108.2 11.2 103 476-594 7-109 (333)
489 PRK11073 glnL nitrogen regulat 98.7 2E-07 4.4E-12 106.3 14.3 117 191-317 6-122 (348)
490 COG0478 RIO-like serine/threon 98.6 1.6E-07 3.5E-12 98.8 11.3 137 674-822 93-250 (304)
491 PRK11360 sensory histidine kin 98.6 1.9E-07 4.1E-12 114.4 14.0 128 185-318 255-383 (607)
492 KOG0501 K+-channel KCNQ [Inorg 98.6 9.5E-08 2.1E-12 107.0 10.0 119 477-595 16-139 (971)
493 PF13596 PAS_10: PAS domain; P 98.6 1.6E-07 3.4E-12 87.6 10.1 106 194-307 1-106 (106)
494 PF12860 PAS_7: PAS fold 98.6 2.1E-07 4.5E-12 88.2 9.1 105 198-314 1-115 (115)
495 PRK09902 hypothetical protein; 98.6 7.7E-07 1.7E-11 92.0 13.7 140 681-823 27-179 (216)
496 PF06176 WaaY: Lipopolysacchar 98.6 9E-07 1.9E-11 91.7 14.0 143 666-821 25-181 (229)
497 PF06293 Kdo: Lipopolysacchari 98.5 1E-06 2.2E-11 92.7 13.9 106 716-823 55-170 (206)
498 KOG0501 K+-channel KCNQ [Inorg 98.5 3.6E-07 7.8E-12 102.5 9.8 121 192-312 14-139 (971)
499 PF13596 PAS_10: PAS domain; P 98.5 4.7E-07 1E-11 84.4 8.7 106 477-590 1-106 (106)
500 PF12860 PAS_7: PAS fold 98.5 5E-07 1.1E-11 85.5 8.5 104 481-596 1-114 (115)
No 1
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=8e-52 Score=443.18 Aligned_cols=336 Identities=54% Similarity=0.967 Sum_probs=292.4
Q ss_pred CCCCCCCCCchhhHHhhc-ccccccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHH
Q 001847 646 PKPHRKDSPPWKAIQKIL-DSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAERE 724 (1005)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~-~~~~~i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~ 724 (1005)
..||.....-|..+..+- ..+..+..++|++++.||.|.-|+||+|....++..+|+|++.+..+.......+...|.+
T Consensus 50 ~kph~~~d~~w~a~~~~~~~~~~~l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~e 129 (459)
T KOG0610|consen 50 NKPHKGNDVRWEAISSIRNSKDGSLGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTERE 129 (459)
T ss_pred CCCCCCCchhhhhhccccccCCCccCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHH
Confidence 446666556677766555 4667788999999999999999999999999999999999999998888888999999999
Q ss_pred HHHhCCCCCcceEEEEEEeCCeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCc
Q 001847 725 ILDMLDHPFVPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 804 (1005)
Q Consensus 725 il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~N 804 (1005)
||..++||+++.+|..|+...+.|++||||+||+|..++++++++.+++..++.|+..++.||+|||-.|||+|||||+|
T Consensus 130 IL~~lDHPFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPEN 209 (459)
T KOG0610|consen 130 ILSLLDHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPEN 209 (459)
T ss_pred HHHhcCCCccchhhheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCcEEEEeccCCcccCCCCCCCCCcc----------------------hhh-hhc---ccCC--CCCccccccc-
Q 001847 805 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT----------------------NEK-KRR---HKGQ--QNPVFMAEPM- 855 (1005)
Q Consensus 805 ILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~----------------------~~~-~~~---~~~~--~~~~~~~~~~- 855 (1005)
|||.++|++.|+||.++..+...+....... ... ++. .... ..+..+..+.
T Consensus 210 ILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~ 289 (459)
T KOG0610|consen 210 ILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTG 289 (459)
T ss_pred eEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCC
Confidence 9999999999999999976644333221100 000 000 0000 0011222333
Q ss_pred ccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHH
Q 001847 856 RASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMY 935 (1005)
Q Consensus 856 ~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~ 935 (1005)
..+.+++||-.|+|||++.+..++.++|-|+||+++|||++|..||.|.+..+.+.+|+.....+|.....+..++|||+
T Consensus 290 ~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr 369 (459)
T KOG0610|consen 290 ARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIR 369 (459)
T ss_pred ccccccccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHH
Confidence 45678899999999999999999999999999999999999999999999999999999999999999889999999999
Q ss_pred HccccCcCccCCChhcHHHHHcCCCCCCCChhhhhhcCCCCCCCCC
Q 001847 936 RLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPL 981 (1005)
Q Consensus 936 ~~L~~dP~~Rpt~~~~a~elL~hpff~~~~~~~~~~~~~~~~~~p~ 981 (1005)
++|.+||.+|+.....|.+|.+||||++++|+++++..||+++.|.
T Consensus 370 ~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnWaLir~~~PP~iP~~~ 415 (459)
T KOG0610|consen 370 KLLVKDPSKRLGSKRGAAEIKRHPFFEGVNWALIRCARPPEIPKPV 415 (459)
T ss_pred HHhccChhhhhccccchHHhhcCccccCCChhheeccCCCcCCCcc
Confidence 9999999999999999999999999999999999999999986654
No 2
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=9.6e-50 Score=440.46 Aligned_cols=319 Identities=42% Similarity=0.719 Sum_probs=269.7
Q ss_pred ccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001847 668 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 747 (1005)
Q Consensus 668 ~i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 747 (1005)
.+..++|+++++||+|+||.||+|+-+.||.+||+|++++..+........+..|..+|...++|+||+++..|++..++
T Consensus 137 r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~L 216 (550)
T KOG0605|consen 137 RLSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYL 216 (550)
T ss_pred cCCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCee
Confidence 34578999999999999999999999999999999999999888889999999999999999999999999999999999
Q ss_pred EEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001847 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (1005)
Q Consensus 748 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 827 (1005)
||||||++||++..+|.+. +.|+++.+++++.+++.|+..||+.|+|||||||+|+|||..|++||+|||++.-....
T Consensus 217 YLiMEylPGGD~mTLL~~~--~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~ 294 (550)
T KOG0605|consen 217 YLIMEYLPGGDMMTLLMRK--DTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKK 294 (550)
T ss_pred EEEEEecCCccHHHHHHhc--CcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhh
Confidence 9999999999999999874 56999999999999999999999999999999999999999999999999998544332
Q ss_pred CCCCCCcchhhh--hcc--cCCCCC----------------cccccccccccccccCCcccccccccCCCCCChhhHHHH
Q 001847 828 PQLLLPTTNEKK--RRH--KGQQNP----------------VFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWAL 887 (1005)
Q Consensus 828 ~~~~~~~~~~~~--~~~--~~~~~~----------------~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSl 887 (1005)
............ ... .....+ .+.-.......+.+|||.|+|||++.+..|+..+|.|||
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSL 374 (550)
T KOG0605|consen 295 HRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSL 374 (550)
T ss_pred hhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHH
Confidence 221100000000 000 000000 000112223445799999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCChHHHHHHHHhCC--CCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCC
Q 001847 888 GILLYEMLYGYTPFRGKTRQKTFANILHKD--LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 965 (1005)
Q Consensus 888 Gvll~eLltG~~Pf~~~~~~~~~~~i~~~~--~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~ 965 (1005)
|||+||||.|.+||.+.+..+.+.+|+... +.+|....++.+++|||.+||+ ||++|+. ...++||.+||||++++
T Consensus 375 G~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG-~~G~~EIK~HPfF~~v~ 452 (550)
T KOG0605|consen 375 GCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLG-SKGAEEIKKHPFFKGVD 452 (550)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcC-cccHHHHhcCCccccCC
Confidence 999999999999999999999999999765 7888888899999999999999 9999998 55699999999999999
Q ss_pred hhhhhhcCCCCCCCCCCCCcccccccc
Q 001847 966 WALVRCMNPPELDAPLFATDTEKEYKV 992 (1005)
Q Consensus 966 ~~~~~~~~~~~~~~p~~~~~~~~~~~~ 992 (1005)
|..++...+| .+|.+....+-.|+.
T Consensus 453 W~~l~~~~ap--fvP~v~~~~DT~yFd 477 (550)
T KOG0605|consen 453 WDHLREMPAP--FVPQVNSELDTQYFD 477 (550)
T ss_pred cchhhcCCCC--CCCCCCCcccccccc
Confidence 9999888877 458877766666664
No 3
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-49 Score=423.59 Aligned_cols=277 Identities=45% Similarity=0.796 Sum_probs=249.9
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 001847 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 748 (1005)
Q Consensus 669 i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 748 (1005)
+..++|++++.||.|+||+||+|+.+.+++.||+|++++..+...........|..||..++||+||.++..|++...+|
T Consensus 22 ~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLy 101 (357)
T KOG0598|consen 22 VGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLY 101 (357)
T ss_pred CChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEE
Confidence 45679999999999999999999999999999999999988877778888999999999999999999999999999999
Q ss_pred EEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 001847 749 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 828 (1005)
Q Consensus 749 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~ 828 (1005)
+|+||+.||.|+-.|+++ +.+++..++.|+..|+.||.|||++|||||||||+|||++.+|+++|+|||+++..-
T Consensus 102 lVld~~~GGeLf~hL~~e--g~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~--- 176 (357)
T KOG0598|consen 102 LVLDYLNGGELFYHLQRE--GRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDL--- 176 (357)
T ss_pred EEEeccCCccHHHHHHhc--CCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcc---
Confidence 999999999999999875 559999999999999999999999999999999999999999999999999996421
Q ss_pred CCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001847 829 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 908 (1005)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~ 908 (1005)
.......++|||+.|||||++.+.+|+..+|-||||+++|+|++|.+||.+.+...
T Consensus 177 ------------------------~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~ 232 (357)
T KOG0598|consen 177 ------------------------KDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKK 232 (357)
T ss_pred ------------------------cCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHH
Confidence 11223456899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCChhhhhhcCCC
Q 001847 909 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPP 975 (1005)
Q Consensus 909 ~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~~~~~~~~~~~ 975 (1005)
.+.+|.++....+.. ..+.++++||.++|..||.+|......+.++.+||||+.++|..+.....+
T Consensus 233 ~~~~I~~~k~~~~p~-~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~inW~~l~~k~l~ 298 (357)
T KOG0598|consen 233 MYDKILKGKLPLPPG-YLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGINWEKLLAKKLS 298 (357)
T ss_pred HHHHHhcCcCCCCCc-cCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCCHHHHHhcCCC
Confidence 999999987433322 268899999999999999999865566999999999999999988444443
No 4
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-49 Score=436.48 Aligned_cols=286 Identities=39% Similarity=0.674 Sum_probs=257.5
Q ss_pred ccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEE
Q 001847 670 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVC 748 (1005)
Q Consensus 670 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~ 748 (1005)
...+|.+.+.||+|+|++|++|+++.+++.||||++.+..+......+.+..|..+|.+| +||.|++++-.|.+...+|
T Consensus 71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLY 150 (604)
T KOG0592|consen 71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLY 150 (604)
T ss_pred ChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceE
Confidence 356899999999999999999999999999999999887776677778888999999999 8999999999999999999
Q ss_pred EEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 001847 749 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 828 (1005)
Q Consensus 749 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~ 828 (1005)
+|+||+++|+|.+++.+. +.+++.-.+.++.||+.||+|||++|||||||||+|||++.||++||.|||.|..+....
T Consensus 151 FvLe~A~nGdll~~i~K~--Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~ 228 (604)
T KOG0592|consen 151 FVLEYAPNGDLLDLIKKY--GSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQ 228 (604)
T ss_pred EEEEecCCCcHHHHHHHh--CcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChhh
Confidence 999999999999999875 669999999999999999999999999999999999999999999999999998876543
Q ss_pred CCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001847 829 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 908 (1005)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~ 908 (1005)
...- .+...........+++||..|.+||+|.....++.+|||+|||+||+|+.|.+||.+.+...
T Consensus 229 ~~~~--------------~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Neyl 294 (604)
T KOG0592|consen 229 KSQE--------------NPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYL 294 (604)
T ss_pred cccc--------------CccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHH
Confidence 3210 00111111112367999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCChhhhhhcCCCCC
Q 001847 909 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPEL 977 (1005)
Q Consensus 909 ~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~~~~~~~~~~~~~ 977 (1005)
++++|+.-...++.. .+..+.+||+++|..||..|++ +.+|.+||||.+++|..++...||++
T Consensus 295 iFqkI~~l~y~fp~~--fp~~a~dLv~KLLv~dp~~Rlt----~~qIk~HpFF~~Vdw~nlw~~~PP~l 357 (604)
T KOG0592|consen 295 IFQKIQALDYEFPEG--FPEDARDLIKKLLVRDPSDRLT----SQQIKAHPFFEGVDWENLWQQTPPKL 357 (604)
T ss_pred HHHHHHHhcccCCCC--CCHHHHHHHHHHHccCcccccc----HHHHhhCcccccCChhhhhhcCCCcc
Confidence 999999998888875 5789999999999999999999 99999999999999999999999987
No 5
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-48 Score=416.45 Aligned_cols=262 Identities=28% Similarity=0.464 Sum_probs=235.2
Q ss_pred ccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC-e
Q 001847 668 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT-H 746 (1005)
Q Consensus 668 ~i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~-~ 746 (1005)
.+...+.+.++.||+|+.|+||+|.|+.|++.+|+|.+.. ..+....+++.+|+++++.++|||||.+|++|..++ .
T Consensus 75 ~i~~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~--~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~ 152 (364)
T KOG0581|consen 75 GISLSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILL--NIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEE 152 (364)
T ss_pred ccCHHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecc--cCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCce
Confidence 4556789999999999999999999999999999999953 346677889999999999999999999999999998 5
Q ss_pred EEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCcccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 001847 747 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 825 (1005)
Q Consensus 747 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~-~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~ 825 (1005)
++|+||||++|+|.+++... +.+++..+..++.++++||.|||. .+||||||||+|||+++.|.|||||||.+....
T Consensus 153 isI~mEYMDgGSLd~~~k~~--g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lv 230 (364)
T KOG0581|consen 153 ISICMEYMDGGSLDDILKRV--GRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILV 230 (364)
T ss_pred EEeehhhcCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhh
Confidence 99999999999999999875 569999999999999999999996 899999999999999999999999999986543
Q ss_pred CCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC-
Q 001847 826 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK- 904 (1005)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~- 904 (1005)
.. ..++++||..|||||.+.+..|+.++||||||++++|+++|++||...
T Consensus 231 nS-----------------------------~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~ 281 (364)
T KOG0581|consen 231 NS-----------------------------IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPN 281 (364)
T ss_pred hh-----------------------------hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcC
Confidence 11 356789999999999999999999999999999999999999999874
Q ss_pred ----ChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCCh
Q 001847 905 ----TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 966 (1005)
Q Consensus 905 ----~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~~ 966 (1005)
...+.+..|+.+..+......+|+++.+||..||++||.+|++ ++||++|||+++...
T Consensus 282 ~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s----~~qLl~Hpfi~~~~~ 343 (364)
T KOG0581|consen 282 PPYLDIFELLCAIVDEPPPRLPEGEFSPEFRSFVSCCLRKDPSERPS----AKQLLQHPFIKKFED 343 (364)
T ss_pred CCCCCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHhcCCcccCCC----HHHHhcCHHHhhccc
Confidence 5678888888876554444468999999999999999999999 999999999997543
No 6
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-48 Score=400.50 Aligned_cols=275 Identities=45% Similarity=0.836 Sum_probs=254.5
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 001847 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 748 (1005)
Q Consensus 669 i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 748 (1005)
..+++|+.++.||.|+||+|.+++++.+|.+||+|++.+..+......+...+|..+|+.+.||+++++++.|.+.+.+|
T Consensus 41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~ly 120 (355)
T KOG0616|consen 41 YSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLY 120 (355)
T ss_pred cchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEE
Confidence 45679999999999999999999999999999999999988878888888999999999999999999999999999999
Q ss_pred EEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 001847 749 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 828 (1005)
Q Consensus 749 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~ 828 (1005)
+||||++||.|+.++++. +.+++..++.++.||+.||+|||+++|++|||||+|||+|++|.+||+|||+|+...
T Consensus 121 mvmeyv~GGElFS~Lrk~--~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~--- 195 (355)
T KOG0616|consen 121 MVMEYVPGGELFSYLRKS--GRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVS--- 195 (355)
T ss_pred EEEeccCCccHHHHHHhc--CCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEec---
Confidence 999999999999999875 569999999999999999999999999999999999999999999999999996643
Q ss_pred CCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001847 829 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 908 (1005)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~ 908 (1005)
....+.||||.|+|||++...+++.++|-||||+++|||+.|.+||...+...
T Consensus 196 ---------------------------~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~ 248 (355)
T KOG0616|consen 196 ---------------------------GRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQ 248 (355)
T ss_pred ---------------------------CcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHH
Confidence 12457899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCCh-hcHHHHHcCCCCCCCChhhh--hhcCCCCC
Q 001847 909 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALV--RCMNPPEL 977 (1005)
Q Consensus 909 ~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~hpff~~~~~~~~--~~~~~~~~ 977 (1005)
++.+|+.+...+|.. .+.++++||.++|+.|-.+|.... +..+++..||||++++|..+ +..++|-.
T Consensus 249 iY~KI~~~~v~fP~~--fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~W~~i~~r~ie~P~~ 318 (355)
T KOG0616|consen 249 IYEKILEGKVKFPSY--FSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVDWEAILQRKIEPPFE 318 (355)
T ss_pred HHHHHHhCcccCCcc--cCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccccHHHHhhccccCCCC
Confidence 999999999999876 688999999999999999996654 47899999999999999988 55556644
No 7
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.4e-49 Score=423.26 Aligned_cols=261 Identities=33% Similarity=0.507 Sum_probs=229.2
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccC----hHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN----RNKVHRACAEREILDMLDHPFVPALYASFQTKTH 746 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~----~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 746 (1005)
.+.|.+.+.||+|+||.|-+|..+.||+.||||++++..... ......+.+|++||++|+||+||+++++|...+.
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds 250 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDS 250 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCc
Confidence 478999999999999999999999999999999998765543 2244557799999999999999999999999999
Q ss_pred EEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecC---CcEEEEeccCCcc
Q 001847 747 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN---GHVSLTDFDLSCL 823 (1005)
Q Consensus 747 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~---g~vkL~DFG~a~~ 823 (1005)
.||||||+.||+|++.+-.+ +.+.+...+.+++||+.||.|||++||+||||||+|||++.+ -.+||.|||+|+.
T Consensus 251 ~YmVlE~v~GGeLfd~vv~n--k~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~ 328 (475)
T KOG0615|consen 251 SYMVLEYVEGGELFDKVVAN--KYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKV 328 (475)
T ss_pred eEEEEEEecCccHHHHHHhc--cccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhc
Confidence 99999999999999999775 458899999999999999999999999999999999999876 6799999999976
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCC---CChhhHHHHHHHHHHHHcCCCC
Q 001847 824 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH---TSAVDWWALGILLYEMLYGYTP 900 (1005)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~---~~~sDIwSlGvll~eLltG~~P 900 (1005)
.+. .....++||||.|.|||++..... ..++|||||||+||-+++|.+|
T Consensus 329 ~g~----------------------------~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pP 380 (475)
T KOG0615|consen 329 SGE----------------------------GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPP 380 (475)
T ss_pred ccc----------------------------ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCC
Confidence 531 122457899999999999977643 3378999999999999999999
Q ss_pred CCCCChHH-HHHHHHhCCCCCC--CCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCC
Q 001847 901 FRGKTRQK-TFANILHKDLKFP--SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 965 (1005)
Q Consensus 901 f~~~~~~~-~~~~i~~~~~~~~--~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~ 965 (1005)
|.+..... ..+.|.++...+. .+..++.++.+||.+||..||++||+ +.++|+||||+..+
T Consensus 381 FS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s----~~eaL~hpW~~~~~ 444 (475)
T KOG0615|consen 381 FSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPS----ADEALNHPWFKDAP 444 (475)
T ss_pred cccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcC----HHHHhcChhhhccc
Confidence 98876554 7788888877654 45668999999999999999999999 99999999999754
No 8
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.7e-48 Score=435.77 Aligned_cols=256 Identities=33% Similarity=0.576 Sum_probs=241.0
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
.+|...+.||+|+|+.||.+++..+|..||+|++.+..+......+++.+|++|.++|+|||||+++++|++.+++|||+
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 57999999999999999999999999999999999988888889999999999999999999999999999999999999
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 831 (1005)
|+|..++|..+++++ +.+++..++.+++||+.||.|||+++|+|||||..|||++++.+|||+|||+|.....+
T Consensus 98 ELC~~~sL~el~Krr--k~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~---- 171 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRR--KPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD---- 171 (592)
T ss_pred EecCCccHHHHHHhc--CCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCc----
Confidence 999999999999854 66999999999999999999999999999999999999999999999999999765422
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001847 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 911 (1005)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~ 911 (1005)
.....+.||||.|+|||++....++..+||||+||++|.|++|++||...+-.+.+.
T Consensus 172 -----------------------~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~ 228 (592)
T KOG0575|consen 172 -----------------------GERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYN 228 (592)
T ss_pred -----------------------ccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHH
Confidence 233457899999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCC
Q 001847 912 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 962 (1005)
Q Consensus 912 ~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~ 962 (1005)
+|...+...|. .++.++++||.+||+.||.+||| +.++|.|+||+
T Consensus 229 ~Ik~~~Y~~P~--~ls~~A~dLI~~lL~~~P~~Rps----l~~vL~h~Ff~ 273 (592)
T KOG0575|consen 229 KIKLNEYSMPS--HLSAEAKDLIRKLLRPNPSERPS----LDEVLDHPFFK 273 (592)
T ss_pred HHHhcCccccc--ccCHHHHHHHHHHhcCCcccCCC----HHHHhcCHhhh
Confidence 99999888887 47899999999999999999999 99999999994
No 9
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9e-46 Score=419.55 Aligned_cols=289 Identities=40% Similarity=0.751 Sum_probs=259.2
Q ss_pred cccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCC
Q 001847 667 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKT 745 (1005)
Q Consensus 667 ~~i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~ 745 (1005)
..+..++|+++++||.|+||+|+++..+.+++.||||++++..+...+.......|..|+... +||+++.++.+|+...
T Consensus 363 ~~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~ 442 (694)
T KOG0694|consen 363 GPLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKE 442 (694)
T ss_pred CcccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCC
Confidence 367889999999999999999999999999999999999999998999999999999999888 5999999999999999
Q ss_pred eEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 001847 746 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 825 (1005)
Q Consensus 746 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~ 825 (1005)
++|+||||+.||++.... ..+.+++..++.|+..|+.||.|||++||||||||.+|||+|.+|++||+|||+++..-
T Consensus 443 ~l~fvmey~~Ggdm~~~~---~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m 519 (694)
T KOG0694|consen 443 HLFFVMEYVAGGDLMHHI---HTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGM 519 (694)
T ss_pred eEEEEEEecCCCcEEEEE---ecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccC
Confidence 999999999999954433 34569999999999999999999999999999999999999999999999999995421
Q ss_pred CCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001847 826 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 905 (1005)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~ 905 (1005)
......+++||||.|||||++.+..|+.++|-|||||+||+|+.|+.||.|++
T Consensus 520 ---------------------------~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gdd 572 (694)
T KOG0694|consen 520 ---------------------------GQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDD 572 (694)
T ss_pred ---------------------------CCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCC
Confidence 11234678999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCCh-hcHHHHHcCCCCCCCChhhhhhcCCCCCCCCCCCC
Q 001847 906 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMNPPELDAPLFAT 984 (1005)
Q Consensus 906 ~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~hpff~~~~~~~~~~~~~~~~~~p~~~~ 984 (1005)
..+.+..|+..+..+|.. ++.++.++++++|..+|++|+.+- ..+.+|.+||||+.++|.++..++-+....|....
T Consensus 573 Eee~FdsI~~d~~~yP~~--ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w~~L~~r~i~PPf~P~i~~ 650 (694)
T KOG0694|consen 573 EEEVFDSIVNDEVRYPRF--LSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDWDDLLNRRIKPPFVPTIKG 650 (694)
T ss_pred HHHHHHHHhcCCCCCCCc--ccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCCHHHHhhccCCCCCCcccCC
Confidence 999999999999988877 688999999999999999999963 34789999999999999999555544446677665
Q ss_pred ccc
Q 001847 985 DTE 987 (1005)
Q Consensus 985 ~~~ 987 (1005)
+.+
T Consensus 651 ~~D 653 (694)
T KOG0694|consen 651 PED 653 (694)
T ss_pred hhh
Confidence 544
No 10
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=5e-46 Score=382.70 Aligned_cols=260 Identities=27% Similarity=0.457 Sum_probs=221.8
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 750 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 750 (1005)
++.|+.+..+|+|+||+||+|+++.||+.||||.+... ..++...+-..+|+++|++|+|+|+|.++++|.....+++|
T Consensus 1 MekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Es-edd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLV 79 (396)
T KOG0593|consen 1 MEKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVES-EDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLV 79 (396)
T ss_pred CcHHhhhhccccCcceEEEEeccCCcccEEEEEeeccC-CccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEE
Confidence 35799999999999999999999999999999998754 33455556668999999999999999999999999999999
Q ss_pred EeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001847 751 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (1005)
Q Consensus 751 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 830 (1005)
+||| .-++.+-+.+.+.+ ++.+.++.++.|++.|+.|+|++++|||||||+||||+.+|.+||||||+|+.....
T Consensus 80 FE~~-dhTvL~eLe~~p~G-~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~p--- 154 (396)
T KOG0593|consen 80 FEYC-DHTVLHELERYPNG-VPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAP--- 154 (396)
T ss_pred eeec-chHHHHHHHhccCC-CCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCC---
Confidence 9999 55555556655444 899999999999999999999999999999999999999999999999999765421
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001847 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 909 (1005)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~ 909 (1005)
......++.|.+|+|||.+.+ .+|+.++||||+||++.||++|.+.|+|.+..++
T Consensus 155 ------------------------gd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQ 210 (396)
T KOG0593|consen 155 ------------------------GDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQ 210 (396)
T ss_pred ------------------------cchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHH
Confidence 122344678999999999988 6899999999999999999999999999998888
Q ss_pred HHHHHhC-------------------CCCCCC----------CCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCC
Q 001847 910 FANILHK-------------------DLKFPS----------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 960 (1005)
Q Consensus 910 ~~~i~~~-------------------~~~~~~----------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpf 960 (1005)
+..|... .+.+|. .+..+.-+.+|+++||..||++|++ .+++|.|+|
T Consensus 211 Ly~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~s----c~qll~H~y 286 (396)
T KOG0593|consen 211 LYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLS----CEQLLHHPY 286 (396)
T ss_pred HHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCcccccc----HHHHhcChH
Confidence 7777541 111221 1335567789999999999999999 999999999
Q ss_pred CCCC
Q 001847 961 FKGV 964 (1005)
Q Consensus 961 f~~~ 964 (1005)
|.++
T Consensus 287 Fd~~ 290 (396)
T KOG0593|consen 287 FDGF 290 (396)
T ss_pred HHHH
Confidence 9664
No 11
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-44 Score=386.15 Aligned_cols=259 Identities=29% Similarity=0.507 Sum_probs=228.7
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 750 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 750 (1005)
.++|.+.+.||+|+|++||+++++.++..||||.+.+..+ .+...+.+..|+++|+.++|||||.+++++...+.+|+|
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l-~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lV 87 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKL-NKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLV 87 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhcc-CHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEE
Confidence 4689999999999999999999999999999999987643 556677888999999999999999999999999999999
Q ss_pred EeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecC------CcEEEEeccCCccc
Q 001847 751 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN------GHVSLTDFDLSCLT 824 (1005)
Q Consensus 751 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~------g~vkL~DFG~a~~~ 824 (1005)
||||.||+|.+|+++. +.+++..++.++.||+.||++||+++||||||||.|||++.+ -.+||.|||+|+.+
T Consensus 88 MEyC~gGDLs~yi~~~--~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L 165 (429)
T KOG0595|consen 88 MEYCNGGDLSDYIRRR--GRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFL 165 (429)
T ss_pred EEeCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhC
Confidence 9999999999999875 459999999999999999999999999999999999999865 35899999999765
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001847 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 904 (1005)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~ 904 (1005)
. +.....+.||+|.|||||++....|+.|+|+||+|++||+|++|+.||...
T Consensus 166 ~----------------------------~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~ 217 (429)
T KOG0595|consen 166 Q----------------------------PGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAE 217 (429)
T ss_pred C----------------------------chhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCcccc
Confidence 4 223456789999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHhCCCCCCCC-CCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCC
Q 001847 905 TRQKTFANILHKDLKFPSS-TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 964 (1005)
Q Consensus 905 ~~~~~~~~i~~~~~~~~~~-~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~ 964 (1005)
+..+....+.++.-..+.. ...+..+.+|+...|+.+|..|.+ ..+-+.|+++..-
T Consensus 218 t~~eL~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~----~~~~~~~~~l~~~ 274 (429)
T KOG0595|consen 218 TPKELLLYIKKGNEIVPVLPAELSNPLRELLISLLQRNPKDRIS----FEDFFDHPFLAAN 274 (429)
T ss_pred CHHHHHHHHhccccccCchhhhccCchhhhhhHHHhcCccccCc----hHHhhhhhhcccC
Confidence 9999888777665443332 224555678999999999999999 7888899988763
No 12
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.9e-45 Score=373.55 Aligned_cols=257 Identities=28% Similarity=0.460 Sum_probs=224.1
Q ss_pred ccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEE-EEEeCCe-E
Q 001847 670 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYA-SFQTKTH-V 747 (1005)
Q Consensus 670 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~-~~~~~~~-~ 747 (1005)
....|++++.||.|+||.||+|.+..+|+.+|.|.+..+ ..+......+..|+.+|++|+|||||++++ .|..+.. +
T Consensus 17 ~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~-~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evl 95 (375)
T KOG0591|consen 17 TLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFG-MMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVL 95 (375)
T ss_pred cHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchh-hccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhh
Confidence 456899999999999999999999999999999999854 456677788999999999999999999998 5655555 8
Q ss_pred EEEEeccCCCchhhHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHH--cC--cccCCCCCCcEEEecCCcEEEEeccCC
Q 001847 748 CLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHC--QG--IIYRDLKPENVLLQGNGHVSLTDFDLS 821 (1005)
Q Consensus 748 ~lV~E~~~ggsL~~~l~~--~~~~~l~~~~i~~i~~qil~aL~~LH~--~g--IvHrDLkP~NILi~~~g~vkL~DFG~a 821 (1005)
+||||||.+|+|..++++ ...+.+++..++.++.||+.||..+|. .+ |+||||||.||+++.+|.+||+|||++
T Consensus 96 nivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~ 175 (375)
T KOG0591|consen 96 NIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLG 175 (375)
T ss_pred HHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhH
Confidence 999999999999999974 345679999999999999999999999 45 999999999999999999999999999
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCC
Q 001847 822 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 901 (1005)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf 901 (1005)
+..+.+ .....+++|||+||+||.+.+.+|+.+|||||+||++|||+.-++||
T Consensus 176 r~l~s~---------------------------~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF 228 (375)
T KOG0591|consen 176 RFLSSK---------------------------TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPF 228 (375)
T ss_pred hHhcch---------------------------hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCc
Confidence 765422 12245689999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHH
Q 001847 902 RGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 954 (1005)
Q Consensus 902 ~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~e 954 (1005)
.|.+-.+.-.+|.+++.+......+|..+..||..|+..||+.||+..+.+.+
T Consensus 229 ~g~n~~~L~~KI~qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~d 281 (375)
T KOG0591|consen 229 YGDNLLSLCKKIEQGDYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQD 281 (375)
T ss_pred ccccHHHHHHHHHcCCCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHH
Confidence 99988888889998876533334578899999999999999999984333333
No 13
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=4e-44 Score=393.78 Aligned_cols=256 Identities=33% Similarity=0.542 Sum_probs=234.1
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
++|.+.+.||+|+||.||+++.+.+.+.||+|.+.+... .....+.+.+|++|++.++||||+.++++|+...++|+|+
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr-~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVt 80 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGR-NEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVT 80 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCC-chHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEe
Confidence 589999999999999999999999999999999987533 3345678899999999999999999999999999999999
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 831 (1005)
||+.| +|+.++... +.++++.++.++.+++.||.|||+++|.|||+||.|||+..+|++|+||||+|+.++....
T Consensus 81 e~a~g-~L~~il~~d--~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~-- 155 (808)
T KOG0597|consen 81 EYAVG-DLFTILEQD--GKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTS-- 155 (808)
T ss_pred hhhhh-hHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccCce--
Confidence 99955 999999875 5599999999999999999999999999999999999999999999999999987653222
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001847 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 911 (1005)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~ 911 (1005)
.-....|||.|||||++.+.+|+..+|.|||||++||+++|++||.........+
T Consensus 156 -------------------------vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~ 210 (808)
T KOG0597|consen 156 -------------------------VLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVK 210 (808)
T ss_pred -------------------------eeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHH
Confidence 2245679999999999999999999999999999999999999999998889999
Q ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCC
Q 001847 912 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 964 (1005)
Q Consensus 912 ~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~ 964 (1005)
.|......+|. ..+..+.+||+++|.+||.+|++ +.+++.|||.++.
T Consensus 211 ~I~~d~v~~p~--~~S~~f~nfl~gLL~kdP~~Rlt----W~~Ll~HpF~k~~ 257 (808)
T KOG0597|consen 211 SILKDPVKPPS--TASSSFVNFLQGLLIKDPAQRLT----WTDLLGHPFWKGK 257 (808)
T ss_pred HHhcCCCCCcc--cccHHHHHHHHHHhhcChhhccc----HHHHhcChHHhhh
Confidence 99999888887 47889999999999999999999 9999999999984
No 14
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.4e-44 Score=399.17 Aligned_cols=264 Identities=31% Similarity=0.533 Sum_probs=239.3
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 750 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 750 (1005)
.+.|++.+.||.|+.|.|-+|++..||+.+|||++.+...........+.+|+-||+.+.||||+++|+++.++.++|+|
T Consensus 11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylv 90 (786)
T KOG0588|consen 11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLV 90 (786)
T ss_pred ccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEE
Confidence 45789999999999999999999999999999999887555666678899999999999999999999999999999999
Q ss_pred EeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001847 751 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (1005)
Q Consensus 751 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 830 (1005)
.||++||.|++++-.. +.+++..+..+++||+.||.|+|..+|+||||||+|+|++..+++||+|||+|.....
T Consensus 91 lEyv~gGELFdylv~k--G~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~---- 164 (786)
T KOG0588|consen 91 LEYVPGGELFDYLVRK--GPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVP---- 164 (786)
T ss_pred EEecCCchhHHHHHhh--CCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecccC----
Confidence 9999999999999875 5699999999999999999999999999999999999999999999999999955321
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCC-CChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001847 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKTRQKT 909 (1005)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~-~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~ 909 (1005)
...-.+.||+|.|.|||++.+.+| +.++||||.|||||.|++|++||.+++....
T Consensus 165 ------------------------gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~L 220 (786)
T KOG0588|consen 165 ------------------------GKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVL 220 (786)
T ss_pred ------------------------CccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHH
Confidence 122346799999999999999887 4699999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCChhhhh
Q 001847 910 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVR 970 (1005)
Q Consensus 910 ~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~~~~~~ 970 (1005)
+.++.++.+..|. .++.++++||.+||..||+.|+| .++|++|||+.+..-....
T Consensus 221 LlKV~~G~f~MPs--~Is~eaQdLLr~ml~VDp~~RiT----~~eI~kHP~l~g~~~~~~~ 275 (786)
T KOG0588|consen 221 LLKVQRGVFEMPS--NISSEAQDLLRRMLDVDPSTRIT----TEEILKHPFLSGYTSLPSS 275 (786)
T ss_pred HHHHHcCcccCCC--cCCHHHHHHHHHHhccCcccccc----HHHHhhCchhhcCCCCChh
Confidence 9999999888874 58999999999999999999999 9999999999987555443
No 15
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-44 Score=388.96 Aligned_cols=263 Identities=28% Similarity=0.469 Sum_probs=226.1
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCC-e
Q 001847 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKT-H 746 (1005)
Q Consensus 669 i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~-~ 746 (1005)
+.+++|.++++||.|+||.||+|+.+.++..||||.+++... .-+.+ .-++|++.|++|+ ||||+++.+++.+.+ .
T Consensus 7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~-s~ee~-~nLREvksL~kln~hpniikL~Evi~d~~~~ 84 (538)
T KOG0661|consen 7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFY-SWEEC-MNLREVKSLRKLNPHPNIIKLKEVIRDNDRI 84 (538)
T ss_pred hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhc-cHHHH-HHHHHHHHHHhcCCCCcchhhHHHhhccCce
Confidence 346799999999999999999999999999999999987533 22222 2357999999998 999999999999887 9
Q ss_pred EEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 001847 747 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 826 (1005)
Q Consensus 747 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~ 826 (1005)
+|+||||| ..+|+++++.+ ...+++..++.|+.||++||+|+|++|+.||||||+|||+..+..+||+|||+|+....
T Consensus 85 L~fVfE~M-d~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~S 162 (538)
T KOG0661|consen 85 LYFVFEFM-DCNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRS 162 (538)
T ss_pred EeeeHHhh-hhhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEeccccccccccc
Confidence 99999999 89999999877 67899999999999999999999999999999999999999999999999999977543
Q ss_pred CCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001847 827 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKT 905 (1005)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlGvll~eLltG~~Pf~~~~ 905 (1005)
.+ ....++.|.+|+|||+|.. ..|+.+.|||++||+++|+++-++.|.|.+
T Consensus 163 kp----------------------------PYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~s 214 (538)
T KOG0661|consen 163 KP----------------------------PYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGAS 214 (538)
T ss_pred CC----------------------------CcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCc
Confidence 21 2234688999999999865 567889999999999999999999999999
Q ss_pred hHHHHHHHHh--C-----------------CCCCCCC---------CCCCHHHHHHHHHccccCcCccCCChhcHHHHHc
Q 001847 906 RQKTFANILH--K-----------------DLKFPSS---------TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 957 (1005)
Q Consensus 906 ~~~~~~~i~~--~-----------------~~~~~~~---------~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 957 (1005)
..+++.+|.. + ++.+|.. +..+.++.+||.+||.|||.+||| |.++|+
T Consensus 215 E~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpT----A~~al~ 290 (538)
T KOG0661|consen 215 EIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPT----ASQALQ 290 (538)
T ss_pred HHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCcc----HHHHhc
Confidence 8888887754 1 2223321 336778999999999999999999 999999
Q ss_pred CCCCCCCChh
Q 001847 958 HPFFKGVNWA 967 (1005)
Q Consensus 958 hpff~~~~~~ 967 (1005)
||||+.....
T Consensus 291 ~pffq~~~~~ 300 (538)
T KOG0661|consen 291 HPFFQVGRAS 300 (538)
T ss_pred Cccccccccc
Confidence 9999975444
No 16
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-43 Score=395.12 Aligned_cols=262 Identities=34% Similarity=0.614 Sum_probs=233.6
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccCh--HHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCC
Q 001847 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR--NKVHRACAEREILDMLD-HPFVPALYASFQTKT 745 (1005)
Q Consensus 669 i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~--~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~ 745 (1005)
...+.|.+.+.||+|+||+|+.+.+..++..||+|++.+...... .....+.+|+.+++.+. ||||+++++++....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 346799999999999999999999999999999998776422211 23456668999999998 999999999999999
Q ss_pred eEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecC-CcEEEEeccCCccc
Q 001847 746 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDLSCLT 824 (1005)
Q Consensus 746 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~-g~vkL~DFG~a~~~ 824 (1005)
.+|+||||+.||+|++++.. .+.+.+..++.+++||+.||+|||++||+||||||+|||++.+ +++||+|||++...
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~--~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~ 171 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVN--KGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAIS 171 (370)
T ss_pred eEEEEEEecCCccHHHHHHH--cCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEecccccccc
Confidence 99999999999999999987 3569999999999999999999999999999999999999999 99999999999664
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCC-CC-ChhhHHHHHHHHHHHHcCCCCCC
Q 001847 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HT-SAVDWWALGILLYEMLYGYTPFR 902 (1005)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~-~~-~~sDIwSlGvll~eLltG~~Pf~ 902 (1005)
. .......+.+||+.|+|||++.+.. |+ .++||||+|++||.|++|+.||.
T Consensus 172 ~---------------------------~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~ 224 (370)
T KOG0583|consen 172 P---------------------------GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFD 224 (370)
T ss_pred C---------------------------CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCC
Confidence 2 0112345679999999999998876 64 69999999999999999999999
Q ss_pred CCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCC
Q 001847 903 GKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 964 (1005)
Q Consensus 903 ~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~ 964 (1005)
..+....+..|..+...+|.... +.++.+|+.+||..||.+|++ +.+++.||||+..
T Consensus 225 d~~~~~l~~ki~~~~~~~p~~~~-S~~~~~Li~~mL~~~P~~R~t----~~~i~~h~w~~~~ 281 (370)
T KOG0583|consen 225 DSNVPNLYRKIRKGEFKIPSYLL-SPEARSLIEKMLVPDPSTRIT----LLEILEHPWFQKE 281 (370)
T ss_pred CccHHHHHHHHhcCCccCCCCcC-CHHHHHHHHHHcCCCcccCCC----HHHHhhChhhccC
Confidence 99999999999999999988755 999999999999999999999 9999999999974
No 17
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.8e-43 Score=387.03 Aligned_cols=289 Identities=26% Similarity=0.379 Sum_probs=236.4
Q ss_pred ccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC--CeE
Q 001847 670 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--THV 747 (1005)
Q Consensus 670 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~--~~~ 747 (1005)
..+.|+.+++||+|+||.||+|++..+|+.||+|.++... .+.....-..+||.||++|+||||+++.+..... ..+
T Consensus 115 ~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~-~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~si 193 (560)
T KOG0600|consen 115 RADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDN-EKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSI 193 (560)
T ss_pred chHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeeccc-CCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceE
Confidence 4578999999999999999999999999999999998753 3445556678899999999999999999998876 689
Q ss_pred EEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001847 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (1005)
Q Consensus 748 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 827 (1005)
|||+||| .-+|..++.. +.-.+++.+++.||+||+.||+|||++||.|||||.+||||+.+|.+||+|||+|.....+
T Consensus 194 YlVFeYM-dhDL~GLl~~-p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~ 271 (560)
T KOG0600|consen 194 YLVFEYM-DHDLSGLLSS-PGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPS 271 (560)
T ss_pred EEEEecc-cchhhhhhcC-CCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCC
Confidence 9999999 6688887764 3456999999999999999999999999999999999999999999999999999765432
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001847 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTR 906 (1005)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlGvll~eLltG~~Pf~~~~~ 906 (1005)
.. ....+.+.|.+|+|||.|.+. .|+..+|+||.||||.||+.|++.|.|.+.
T Consensus 272 ~~--------------------------~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tE 325 (560)
T KOG0600|consen 272 GS--------------------------APYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTE 325 (560)
T ss_pred CC--------------------------cccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccH
Confidence 21 123456889999999999885 689999999999999999999999999999
Q ss_pred HHHHHHHHhC--C--------CCCCC-----------------CCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCC
Q 001847 907 QKTFANILHK--D--------LKFPS-----------------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHP 959 (1005)
Q Consensus 907 ~~~~~~i~~~--~--------~~~~~-----------------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hp 959 (1005)
.+++..|.+- . ..+|. ...++....+|+..||+.||.+|.| |.++|+|+
T Consensus 326 veQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~t----A~~aL~se 401 (560)
T KOG0600|consen 326 VEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGT----ASSALQSE 401 (560)
T ss_pred HHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCcccccc----HHHHhcCc
Confidence 9999988751 0 01110 1224567789999999999999999 99999999
Q ss_pred CCCCCChhhhhhcCCCCCCCCCCCCccccccccCCchh
Q 001847 960 FFKGVNWALVRCMNPPELDAPLFATDTEKEYKVVDPGM 997 (1005)
Q Consensus 960 ff~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 997 (1005)
||+.-..+ .+...+|..-+.-+.+.+..++.+
T Consensus 402 yF~t~p~~------~~p~~Lp~y~~s~E~~~K~r~e~~ 433 (560)
T KOG0600|consen 402 YFTTEPLP------CDPSSLPKYPPSHELDAKRRREQK 433 (560)
T ss_pred ccccCCCC------CCcccCCCCCcchhHHHHHHHHHh
Confidence 99643222 222345666665555555554443
No 18
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=6.6e-43 Score=354.71 Aligned_cols=272 Identities=26% Similarity=0.460 Sum_probs=229.0
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
.+|..++.||+|.||.||+|++..+|+.||||.++.....+. -.....+|++.|+.++|+||+.++++|...+.+.||+
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdG-i~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVf 80 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDG-INRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVF 80 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccC-ccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEE
Confidence 479999999999999999999999999999999987633222 2345678999999999999999999999999999999
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 831 (1005)
||| ..+|...++.. ...++..+++.|+.++++||+|||++.|+||||||+|+||+++|.+||+|||+|+.......
T Consensus 81 Efm-~tdLe~vIkd~-~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~-- 156 (318)
T KOG0659|consen 81 EFM-PTDLEVVIKDK-NIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNR-- 156 (318)
T ss_pred Eec-cccHHHHhccc-ccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCc--
Confidence 999 78999998754 45699999999999999999999999999999999999999999999999999977653322
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001847 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 910 (1005)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~ 910 (1005)
.....+-|.+|+|||.+.+. .|+..+||||.||++.||+-|.+.|.|.+..+++
T Consensus 157 -------------------------~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL 211 (318)
T KOG0659|consen 157 -------------------------IQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQL 211 (318)
T ss_pred -------------------------ccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHH
Confidence 12233789999999999885 6788999999999999999999999999999988
Q ss_pred HHHHhC--C---CCCCC---------------------CCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCC
Q 001847 911 ANILHK--D---LKFPS---------------------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 964 (1005)
Q Consensus 911 ~~i~~~--~---~~~~~---------------------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~ 964 (1005)
..|.+- . -.||. .+..+.++.+|+.+||..||.+|++ +.|+|+|+||+..
T Consensus 212 ~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rit----a~qaL~~~yf~~~ 287 (318)
T KOG0659|consen 212 SKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRIT----ASQALKHPYFKSL 287 (318)
T ss_pred HHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhccc----HHHHhcchhhhcC
Confidence 888651 1 11111 1234667889999999999999999 9999999999985
Q ss_pred ChhhhhhcCCCCCCCCC
Q 001847 965 NWALVRCMNPPELDAPL 981 (1005)
Q Consensus 965 ~~~~~~~~~~~~~~~p~ 981 (1005)
..... +.++++|.
T Consensus 288 P~pt~----~~~lp~p~ 300 (318)
T KOG0659|consen 288 PLPTP----PSKLPIPS 300 (318)
T ss_pred CCCCC----hhhCcCCc
Confidence 44433 44444443
No 19
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-43 Score=380.67 Aligned_cols=267 Identities=34% Similarity=0.569 Sum_probs=227.7
Q ss_pred ccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccC-----------hHHHHHHHHHHHHHHhCCCCCcce
Q 001847 668 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN-----------RNKVHRACAEREILDMLDHPFVPA 736 (1005)
Q Consensus 668 ~i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~-----------~~~~~~~~~E~~il~~l~hpnIv~ 736 (1005)
...+++|++++.||+|.||.|-+|++..+++.||||++.+..... ....+++.+||.||++|.|||||+
T Consensus 93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~ 172 (576)
T KOG0585|consen 93 RKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVK 172 (576)
T ss_pred ceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeE
Confidence 344679999999999999999999999999999999997642211 122468889999999999999999
Q ss_pred EEEEEEe--CCeEEEEEeccCCCchhhHHhhCCCCC-CCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcE
Q 001847 737 LYASFQT--KTHVCLITDYCPGGELFLLLDRQPTKV-LKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHV 813 (1005)
Q Consensus 737 l~~~~~~--~~~~~lV~E~~~ggsL~~~l~~~~~~~-l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~v 813 (1005)
++++..+ .+.+|||+|||..|.+...-. .+. +++.+++.|+++++.||+|||.+|||||||||+|+|++++|++
T Consensus 173 LiEvLDDP~s~~~YlVley~s~G~v~w~p~---d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~V 249 (576)
T KOG0585|consen 173 LIEVLDDPESDKLYLVLEYCSKGEVKWCPP---DKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTV 249 (576)
T ss_pred EEEeecCcccCceEEEEEeccCCccccCCC---CcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcE
Confidence 9999975 468999999998887754432 334 8999999999999999999999999999999999999999999
Q ss_pred EEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCC----CCChhhHHHHHH
Q 001847 814 SLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG----HTSAVDWWALGI 889 (1005)
Q Consensus 814 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~----~~~~sDIwSlGv 889 (1005)
||+|||.+........ ...+ ..-...+|||.|+|||.+.+.. .+.+.||||+||
T Consensus 250 KIsDFGVs~~~~~~~~---~~~d-------------------~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGV 307 (576)
T KOG0585|consen 250 KISDFGVSNEFPQGSD---EGSD-------------------DQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGV 307 (576)
T ss_pred EeeccceeeecccCCc---cccH-------------------HHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhh
Confidence 9999999865422100 0000 1112258999999999987732 355899999999
Q ss_pred HHHHHHcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCC
Q 001847 890 LLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 963 (1005)
Q Consensus 890 ll~eLltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~ 963 (1005)
+||.|++|+.||.+....+.+.+|+...+.+|....+...+++||.+||++||++|++ +.++..|||...
T Consensus 308 TLYCllfG~~PF~~~~~~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~----l~~ik~Hpwvt~ 377 (576)
T KOG0585|consen 308 TLYCLLFGQLPFFDDFELELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRIT----LPDIKLHPWVTR 377 (576)
T ss_pred hHHHhhhccCCcccchHHHHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheee----hhhheecceecc
Confidence 9999999999999999999999999999999999888999999999999999999999 999999999986
No 20
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=2e-42 Score=384.67 Aligned_cols=278 Identities=39% Similarity=0.694 Sum_probs=238.9
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
++|++++.||+|+||.||+|.+..+++.||+|++.............+.+|+.+++.++||||+++++++.+.+.+|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 37999999999999999999999999999999987653333445567888999999999999999999999999999999
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 831 (1005)
||+.+++|.+++... +.+++..+..++.||+.||+|||++||+||||||+|||++.+|.+||+|||++.....
T Consensus 81 e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~----- 153 (291)
T cd05612 81 EYVPGGELFSYLRNS--GRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRD----- 153 (291)
T ss_pred eCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccC-----
Confidence 999999999999764 4589999999999999999999999999999999999999999999999998854321
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001847 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 911 (1005)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~ 911 (1005)
.....+|++.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+.
T Consensus 154 -------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~ 208 (291)
T cd05612 154 -------------------------RTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYE 208 (291)
T ss_pred -------------------------CcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 1123468999999999998889999999999999999999999999988888888
Q ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCCh-hcHHHHHcCCCCCCCChhhhhhcCCCCCCCCCCC
Q 001847 912 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMNPPELDAPLFA 983 (1005)
Q Consensus 912 ~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~hpff~~~~~~~~~~~~~~~~~~p~~~ 983 (1005)
.+......++.. .+..+.+||.+||..||.+|++.. ..++++++||||+.++|..+....-.....|-++
T Consensus 209 ~i~~~~~~~~~~--~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~~~~~~~~~p~~~ 279 (291)
T cd05612 209 KILAGKLEFPRH--LDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSVDWDDVPQRKLKPPIVPKVS 279 (291)
T ss_pred HHHhCCcCCCcc--CCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCCCHHHHhcCCCCCCEeCCCC
Confidence 888887766654 578899999999999999999532 3499999999999999998754443333345443
No 21
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-42 Score=375.03 Aligned_cols=273 Identities=26% Similarity=0.395 Sum_probs=237.1
Q ss_pred cccccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 001847 665 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 744 (1005)
Q Consensus 665 ~~~~i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 744 (1005)
.+++++.+.|++...||.|..++||+|+...++.+||||++..+... .....+.+|+..++.++||||+.++.+|..+
T Consensus 19 ~~~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~--~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~ 96 (516)
T KOG0582|consen 19 KEFPLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCN--NDLDALRKEVQTMSLIDHPNIVTYHCSFVVD 96 (516)
T ss_pred ccCCCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhh--hhHHHHHHHHHHhhhcCCCCcceEEEEEEec
Confidence 45567889999999999999999999999999999999999866443 3378889999999999999999999999999
Q ss_pred CeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCccc
Q 001847 745 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 824 (1005)
Q Consensus 745 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~ 824 (1005)
..+|+||.||.+|++.++++..-...+++..+..|++++++||.|||++|.||||||+.||||+++|.|||+|||.+..+
T Consensus 97 ~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l 176 (516)
T KOG0582|consen 97 SELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASL 176 (516)
T ss_pred ceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeee
Confidence 99999999999999999998755555999999999999999999999999999999999999999999999999998655
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccc-cccccCCcccccccccC--CCCCChhhHHHHHHHHHHHHcCCCCC
Q 001847 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRAS-NSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYTPF 901 (1005)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~gt~~y~aPE~l~~--~~~~~~sDIwSlGvll~eLltG~~Pf 901 (1005)
-.... ..... .++.||++|||||++.. ..|+.|+||||||++..||++|+.||
T Consensus 177 ~~~G~------------------------R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf 232 (516)
T KOG0582|consen 177 FDSGD------------------------RQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPF 232 (516)
T ss_pred cccCc------------------------eeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCc
Confidence 32110 01111 67799999999999755 46788999999999999999999999
Q ss_pred CCCChHHHHHHHHhCCCCCCCC--------CCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCChh
Q 001847 902 RGKTRQKTFANILHKDLKFPSS--------TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 967 (1005)
Q Consensus 902 ~~~~~~~~~~~i~~~~~~~~~~--------~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~~~ 967 (1005)
....+.+.+..-+++.++.+.. ...+..+..+|..||.+||.+||| +.++|+|+||+...-.
T Consensus 233 ~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRpt----AskLlkh~FFk~~k~~ 302 (516)
T KOG0582|consen 233 SKYPPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPT----ASKLLKHAFFKKAKSK 302 (516)
T ss_pred ccCChHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCC----HHHHhccHHHhhccch
Confidence 9998888887777777654432 335667899999999999999999 9999999999986543
No 22
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-44 Score=359.97 Aligned_cols=261 Identities=30% Similarity=0.484 Sum_probs=232.2
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 001847 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 748 (1005)
Q Consensus 669 i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 748 (1005)
+..+.|.+.+.||+|.|+.||++.+..+|+.+|+|++.-..+. ....+.+.+|+.|.+.|+||||+++++.+...+..|
T Consensus 8 ~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~-~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~y 86 (355)
T KOG0033|consen 8 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS-ARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHY 86 (355)
T ss_pred ccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhc-cccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeE
Confidence 3457899999999999999999999999999999988765443 336788999999999999999999999999999999
Q ss_pred EEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecC---CcEEEEeccCCcccC
Q 001847 749 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN---GHVSLTDFDLSCLTS 825 (1005)
Q Consensus 749 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~---g~vkL~DFG~a~~~~ 825 (1005)
+|+|+|.|++|..-+-.+ ..+++..+-.+++||+++|.|+|.+||||||+||.|+++.+. .-+||+|||+|...+
T Consensus 87 lvFe~m~G~dl~~eIV~R--~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~ 164 (355)
T KOG0033|consen 87 LVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN 164 (355)
T ss_pred EEEecccchHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeC
Confidence 999999999997555433 458999999999999999999999999999999999999753 359999999996543
Q ss_pred CCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001847 826 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 905 (1005)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~ 905 (1005)
+ .......+|||+|||||++...+++..+|||+.|++||-|+.|++||.+.+
T Consensus 165 ~----------------------------g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~ 216 (355)
T KOG0033|consen 165 D----------------------------GEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED 216 (355)
T ss_pred C----------------------------ccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCcc
Confidence 1 123346789999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhCCCCCCC--CCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCC
Q 001847 906 RQKTFANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 964 (1005)
Q Consensus 906 ~~~~~~~i~~~~~~~~~--~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~ 964 (1005)
....++.|+++..+++. +..+++++++|+.+||..||.+|+| +.|+|+|||+.+.
T Consensus 217 ~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIt----a~EAL~HpWi~~r 273 (355)
T KOG0033|consen 217 QHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRIT----ADEALKHPWICNR 273 (355)
T ss_pred HHHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhcc----HHHHhCCchhcch
Confidence 99999999998776654 6788999999999999999999999 9999999999974
No 23
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=3.2e-42 Score=391.30 Aligned_cols=286 Identities=35% Similarity=0.678 Sum_probs=242.9
Q ss_pred ccccCCccccccccccCcEEEEEEEEcCCC-eEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 001847 668 QINLQHFRPIKPLGSGDTGSVHLVELCGSG-QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 746 (1005)
Q Consensus 668 ~i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~-~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 746 (1005)
.+..++|.+++.||.|+||.||+|.+..++ ..||+|.+.............+.+|+.+++.++||||+++++++...+.
T Consensus 26 ~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~ 105 (340)
T PTZ00426 26 KMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESY 105 (340)
T ss_pred CCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCE
Confidence 355679999999999999999999986655 6899999876544444556678899999999999999999999999999
Q ss_pred EEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 001847 747 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 826 (1005)
Q Consensus 747 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~ 826 (1005)
+|+||||+.+++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||++.....
T Consensus 106 ~~lv~Ey~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~ 183 (340)
T PTZ00426 106 LYLVLEFVIGGEFFTFLRRN--KRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT 183 (340)
T ss_pred EEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCC
Confidence 99999999999999999765 4589999999999999999999999999999999999999999999999999854321
Q ss_pred CCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001847 827 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 906 (1005)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~ 906 (1005)
......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.
T Consensus 184 ------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~ 233 (340)
T PTZ00426 184 ------------------------------RTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEP 233 (340)
T ss_pred ------------------------------CcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCH
Confidence 01235799999999999988889999999999999999999999999888
Q ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCC-hhcHHHHHcCCCCCCCChhhhhhcCCCCCCCCCCCCc
Q 001847 907 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGS-HEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATD 985 (1005)
Q Consensus 907 ~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~-~~~a~elL~hpff~~~~~~~~~~~~~~~~~~p~~~~~ 985 (1005)
...+..+..+...++.. .+..+.+||.+||..||.+|++. .+.++++++||||++++|..+....-+....|.+...
T Consensus 234 ~~~~~~i~~~~~~~p~~--~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~~~~~~~~~~~~~~~~p~~~~~ 311 (340)
T PTZ00426 234 LLIYQKILEGIIYFPKF--LDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNIDWVSLLHKNVEVPYKPKYKNV 311 (340)
T ss_pred HHHHHHHhcCCCCCCCC--CCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCCCCCC
Confidence 88888888877665543 67889999999999999999732 1339999999999999999875444333445666554
Q ss_pred cc
Q 001847 986 TE 987 (1005)
Q Consensus 986 ~~ 987 (1005)
..
T Consensus 312 ~~ 313 (340)
T PTZ00426 312 FD 313 (340)
T ss_pred cc
Confidence 43
No 24
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=4.1e-42 Score=389.05 Aligned_cols=267 Identities=40% Similarity=0.773 Sum_probs=236.3
Q ss_pred ccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 001847 670 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 749 (1005)
Q Consensus 670 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 749 (1005)
..++|++.+.||+|+||.||+|.+..+++.||+|++.............+.+|+.+++.++||||+++++++...+.+|+
T Consensus 16 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 95 (329)
T PTZ00263 16 KLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYF 95 (329)
T ss_pred CchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEE
Confidence 45789999999999999999999999999999999986544444456678899999999999999999999999999999
Q ss_pred EEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 001847 750 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 829 (1005)
Q Consensus 750 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~ 829 (1005)
||||+.+++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++.....
T Consensus 96 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~--- 170 (329)
T PTZ00263 96 LLEFVVGGELFTHLRKA--GRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD--- 170 (329)
T ss_pred EEcCCCCChHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCC---
Confidence 99999999999999764 4589999999999999999999999999999999999999999999999999854321
Q ss_pred CCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001847 830 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 909 (1005)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~ 909 (1005)
.....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....
T Consensus 171 ---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~ 223 (329)
T PTZ00263 171 ---------------------------RTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRI 223 (329)
T ss_pred ---------------------------CcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHH
Confidence 11235799999999999998899999999999999999999999999888888
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCC-hhcHHHHHcCCCCCCCChhhhh
Q 001847 910 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGS-HEGANEIKKHPFFKGVNWALVR 970 (1005)
Q Consensus 910 ~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~-~~~a~elL~hpff~~~~~~~~~ 970 (1005)
+..+..+...++.. ++..+.+||.+||+.||.+|++. .+.++++++||||++.+|..+.
T Consensus 224 ~~~i~~~~~~~p~~--~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~~~~~~~ 283 (329)
T PTZ00263 224 YEKILAGRLKFPNW--FDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGANWDKLY 283 (329)
T ss_pred HHHHhcCCcCCCCC--CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCCCHHHHH
Confidence 88888877666543 67889999999999999999974 2458999999999999999874
No 25
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=5.3e-42 Score=387.18 Aligned_cols=263 Identities=43% Similarity=0.774 Sum_probs=228.1
Q ss_pred ccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCC
Q 001847 678 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGG 757 (1005)
Q Consensus 678 ~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~gg 757 (1005)
+.||+|+||.||+|.+..+|+.||+|++++...........+.+|+.+++.++||||++++++|...+.+|+||||+.++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 46899999999999999999999999998754444555667788999999999999999999999999999999999999
Q ss_pred chhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchh
Q 001847 758 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 837 (1005)
Q Consensus 758 sL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~ 837 (1005)
+|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~---------- 148 (323)
T cd05571 81 ELFFHLSRE--RVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISD---------- 148 (323)
T ss_pred cHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccC----------
Confidence 999998764 45899999999999999999999999999999999999999999999999988432100
Q ss_pred hhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCC
Q 001847 838 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKD 917 (1005)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~~i~~~~ 917 (1005)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.......+....
T Consensus 149 -----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~ 211 (323)
T cd05571 149 -----------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE 211 (323)
T ss_pred -----------------CCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCC
Confidence 011234579999999999999889999999999999999999999999888777777777776
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCccCCChh-cHHHHHcCCCCCCCChhhhhh
Q 001847 918 LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANEIKKHPFFKGVNWALVRC 971 (1005)
Q Consensus 918 ~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~-~a~elL~hpff~~~~~~~~~~ 971 (1005)
..++. .++.++.+||.+||..||.+||+... .+.++++||||+.++|..+..
T Consensus 212 ~~~p~--~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~~~~~~~~ 264 (323)
T cd05571 212 IRFPR--TLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASINWQDVVQ 264 (323)
T ss_pred CCCCC--CCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCCCHHHHHh
Confidence 66554 46889999999999999999993221 299999999999999998853
No 26
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-43 Score=389.39 Aligned_cols=267 Identities=27% Similarity=0.459 Sum_probs=236.8
Q ss_pred hHHhhcccccccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceE
Q 001847 658 AIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPAL 737 (1005)
Q Consensus 658 ~~~~~~~~~~~i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l 737 (1005)
.++.++..+.+. ..|.....||+|+.|.||.+....+++.||+|.+.... ....+-+++|+.+|+..+|+|||.+
T Consensus 261 ~l~~v~~~~dP~--~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~---Q~~keLilnEi~Vm~~~~H~NiVnf 335 (550)
T KOG0578|consen 261 KLKRVVSQGDPR--SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRK---QPKKELLLNEILVMRDLHHPNIVNF 335 (550)
T ss_pred HhheeccCCChh--hhhcchhhhccccccceeeeeeccCCceEEEEEEEecc---CCchhhhHHHHHHHHhccchHHHHH
Confidence 445566666664 48999999999999999999999999999999998653 3345678899999999999999999
Q ss_pred EEEEEeCCeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEe
Q 001847 738 YASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTD 817 (1005)
Q Consensus 738 ~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~D 817 (1005)
++.|...+.+|+|||||+||+|.+.+.. ..+++.++..+++.++.||+|||.+||+|||||.+|||++.+|.+||+|
T Consensus 336 l~Sylv~deLWVVMEym~ggsLTDvVt~---~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltD 412 (550)
T KOG0578|consen 336 LDSYLVGDELWVVMEYMEGGSLTDVVTK---TRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTD 412 (550)
T ss_pred HHHhcccceeEEEEeecCCCchhhhhhc---ccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEee
Confidence 9999999999999999999999999876 3499999999999999999999999999999999999999999999999
Q ss_pred ccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcC
Q 001847 818 FDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYG 897 (1005)
Q Consensus 818 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG 897 (1005)
||++..+... ...+.+.+|||+|||||+.....|++++||||||+++.||+-|
T Consensus 413 FGFcaqi~~~---------------------------~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveG 465 (550)
T KOG0578|consen 413 FGFCAQISEE---------------------------QSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEG 465 (550)
T ss_pred eeeeeccccc---------------------------cCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcC
Confidence 9998654321 1134678999999999999999999999999999999999999
Q ss_pred CCCCCCCChHHHHHHHHh-CCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCC
Q 001847 898 YTPFRGKTRQKTFANILH-KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 963 (1005)
Q Consensus 898 ~~Pf~~~~~~~~~~~i~~-~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~ 963 (1005)
++||...++...+..|.. +...+.....+|..+++||.+||+.|+++|++ |.+||+||||+.
T Consensus 466 EPPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~Ras----A~eLL~HpFl~~ 528 (550)
T KOG0578|consen 466 EPPYLNENPLRALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRAS----AKELLEHPFLKM 528 (550)
T ss_pred CCCccCCChHHHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCC----HHHHhcChhhhh
Confidence 999998888777777664 56667777789999999999999999999999 999999999964
No 27
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.2e-43 Score=350.80 Aligned_cols=261 Identities=36% Similarity=0.591 Sum_probs=242.8
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 001847 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 748 (1005)
Q Consensus 669 i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 748 (1005)
...++|.+.+.||.|-||.||+++.++++-.+|+|++.+..+.......++.+|++|.+.|+||||+++|++|.+...+|
T Consensus 19 ~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riy 98 (281)
T KOG0580|consen 19 WTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIY 98 (281)
T ss_pred cchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeE
Confidence 34679999999999999999999999999999999999887777777788999999999999999999999999999999
Q ss_pred EEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 001847 749 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 828 (1005)
Q Consensus 749 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~ 828 (1005)
+++||..+|+|+..++.+....+++.....++.|++.||.|+|.++||||||||+|+|++..|.+||+|||.+..
T Consensus 99 LilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~----- 173 (281)
T KOG0580|consen 99 LILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVH----- 173 (281)
T ss_pred EEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceee-----
Confidence 999999999999999977677899999999999999999999999999999999999999999999999999843
Q ss_pred CCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001847 829 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 908 (1005)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~ 908 (1005)
.++..+.+.|||..|.+||...+..++..+|+|++|++.|+++.|.+||...+..+
T Consensus 174 ------------------------~p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~e 229 (281)
T KOG0580|consen 174 ------------------------APSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSE 229 (281)
T ss_pred ------------------------cCCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHH
Confidence 33455678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCC
Q 001847 909 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 964 (1005)
Q Consensus 909 ~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~ 964 (1005)
.+.+|.+.++.+|. .++..+.+||.+||.++|.+|.. +.+++.|||+...
T Consensus 230 tYkrI~k~~~~~p~--~is~~a~dlI~~ll~~~p~~r~~----l~~v~~hpwI~a~ 279 (281)
T KOG0580|consen 230 TYKRIRKVDLKFPS--TISGGAADLISRLLVKNPIERLA----LTEVMDHPWIVAN 279 (281)
T ss_pred HHHHHHHccccCCc--ccChhHHHHHHHHhccCcccccc----HHHHhhhHHHHhc
Confidence 99999999888884 47899999999999999999999 9999999998753
No 28
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1.9e-41 Score=384.34 Aligned_cols=278 Identities=37% Similarity=0.642 Sum_probs=238.2
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
++|++++.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.++..++||||+++++++...+.+|+||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 47999999999999999999999999999999998764444455667888999999999999999999999999999999
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 831 (1005)
||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~----- 153 (333)
T cd05600 81 EYVPGGDFRTLLNNL--GVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT----- 153 (333)
T ss_pred eCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCccccc-----
Confidence 999999999999764 4589999999999999999999999999999999999999999999999999854221
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001847 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 911 (1005)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~ 911 (1005)
......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.+.
T Consensus 154 -------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~ 208 (333)
T cd05600 154 -------------------------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWE 208 (333)
T ss_pred -------------------------ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHH
Confidence 1234579999999999998899999999999999999999999999888777776
Q ss_pred HHHhCC--CCCCCC----CCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCChhhhhhcCCCCCCCCCCCCc
Q 001847 912 NILHKD--LKFPSS----TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATD 985 (1005)
Q Consensus 912 ~i~~~~--~~~~~~----~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~~~~~~~~~~~~~~~p~~~~~ 985 (1005)
.+.... +..+.. ..++.++.+||.+||..+|.+||+ +.++++||||+.++|..+....+|- +|.+...
T Consensus 209 ~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s----~~~ll~h~~~~~~~~~~~~~~~~~~--~~~~~~~ 282 (333)
T cd05600 209 NLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGS----LEDIKNHPFFKEVDWNELRELKPPF--VPELESE 282 (333)
T ss_pred HHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCC----HHHHHhCcccCCCCHHHHhhCCCCC--CCCCCCc
Confidence 665432 222222 145889999999999999999999 9999999999999999988656653 3655544
Q ss_pred cc
Q 001847 986 TE 987 (1005)
Q Consensus 986 ~~ 987 (1005)
..
T Consensus 283 ~~ 284 (333)
T cd05600 283 ID 284 (333)
T ss_pred ch
Confidence 43
No 29
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=4.1e-41 Score=386.25 Aligned_cols=294 Identities=37% Similarity=0.652 Sum_probs=234.0
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
++|++++.||+|+||.||+|.+..+++.||+|++.+...........+..|+.++..++|+||+++++++.....+|+||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 37999999999999999999999999999999998654444455567788999999999999999999999999999999
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 831 (1005)
||++||+|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++..........
T Consensus 81 E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~ 158 (363)
T cd05628 81 EFLPGGDMMTLLMKK--DTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTE 158 (363)
T ss_pred cCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCccccccccccc
Confidence 999999999999764 459999999999999999999999999999999999999999999999999986543211100
Q ss_pred CCcc-hhhhhcccCCC--C-----CcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001847 832 LPTT-NEKKRRHKGQQ--N-----PVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 903 (1005)
Q Consensus 832 ~~~~-~~~~~~~~~~~--~-----~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~ 903 (1005)
.... ........... . ..............+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~ 238 (363)
T cd05628 159 FYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (363)
T ss_pred ccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCC
Confidence 0000 00000000000 0 00000001112356899999999999998899999999999999999999999999
Q ss_pred CChHHHHHHHHhC--CCCCCCCCCCCHHHHHHHHHccccCcCcc---CCChhcHHHHHcCCCCCCCChhhhhhc
Q 001847 904 KTRQKTFANILHK--DLKFPSSTPTSLHAKQLMYRLLHRDPKSR---LGSHEGANEIKKHPFFKGVNWALVRCM 972 (1005)
Q Consensus 904 ~~~~~~~~~i~~~--~~~~~~~~~~s~~l~~Ll~~~L~~dP~~R---pt~~~~a~elL~hpff~~~~~~~~~~~ 972 (1005)
.+..+.+..+... ...++....++.++++||.+|+. +|.+| |+ +.++++||||++++|..++..
T Consensus 239 ~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~----~~ei~~hp~f~~~~~~~~~~~ 307 (363)
T cd05628 239 ETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCC-EWEHRIGAPG----VEEIKTNPFFEGVDWEHIRER 307 (363)
T ss_pred CCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCC----HHHHhCCCCCCCCCHHHHHhC
Confidence 8888888888763 45566656678999999999876 55555 66 999999999999999998654
No 30
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=2.5e-41 Score=374.73 Aligned_cols=275 Identities=33% Similarity=0.563 Sum_probs=227.1
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 752 (1005)
.|++.+.||+|+||.||++.+..+++.||+|.+.............+.+|+.+++.++|+||+.+++++...+.+|+|||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 48889999999999999999999999999999876544333444567789999999999999999999999999999999
Q ss_pred ccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001847 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (1005)
Q Consensus 753 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 832 (1005)
|+++++|.+++.......+++..+..++.||+.||.|||++||+||||||+|||+++++.++|+|||++......
T Consensus 81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----- 155 (285)
T cd05631 81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEG----- 155 (285)
T ss_pred ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC-----
Confidence 999999998886544456899999999999999999999999999999999999999999999999998543210
Q ss_pred CcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001847 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 912 (1005)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~~ 912 (1005)
.......|++.|+|||++.+..++.++|||||||++|+|++|+.||.+.........
T Consensus 156 -----------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~ 212 (285)
T cd05631 156 -----------------------ETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREE 212 (285)
T ss_pred -----------------------CeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHH
Confidence 011234689999999999998999999999999999999999999987654322222
Q ss_pred HHh--CCCCCCCCCCCCHHHHHHHHHccccCcCccCCCh-hcHHHHHcCCCCCCCChhhhhhcCCC
Q 001847 913 ILH--KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMNPP 975 (1005)
Q Consensus 913 i~~--~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~hpff~~~~~~~~~~~~~~ 975 (1005)
+.. ...........+..+.+||.+||+.||.+||+.. ..++++++||||.+++|..+...+.+
T Consensus 213 ~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~ 278 (285)
T cd05631 213 VDRRVKEDQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNINFKRLEANMLE 278 (285)
T ss_pred HHHHhhcccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCCHHHHHhCcCC
Confidence 211 1111222234688999999999999999999754 23899999999999999999665443
No 31
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=2.4e-41 Score=388.39 Aligned_cols=307 Identities=38% Similarity=0.690 Sum_probs=241.3
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
++|++++.||.|+||.||+|.+..+++.||||++.............+.+|+.++..++||||++++++|...+.+|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 47999999999999999999999999999999998654444455567788999999999999999999999999999999
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 831 (1005)
||+.+++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.++|+|||++..........
T Consensus 81 E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 158 (364)
T cd05599 81 EYLPGGDMMTLLMKK--DTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTE 158 (364)
T ss_pred CCCCCcHHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceecccccccc
Confidence 999999999998764 459999999999999999999999999999999999999999999999999986542211100
Q ss_pred -CCcchhhhhc---------c-cCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCC
Q 001847 832 -LPTTNEKKRR---------H-KGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP 900 (1005)
Q Consensus 832 -~~~~~~~~~~---------~-~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~P 900 (1005)
.......... . .......+...........+||+.|+|||++....++.++|||||||++|+|++|..|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~P 238 (364)
T cd05599 159 FYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPP 238 (364)
T ss_pred ccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCC
Confidence 0000000000 0 0000000000000012245799999999999988899999999999999999999999
Q ss_pred CCCCChHHHHHHHHhCC--CCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCChhhhhhcCCCCCC
Q 001847 901 FRGKTRQKTFANILHKD--LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELD 978 (1005)
Q Consensus 901 f~~~~~~~~~~~i~~~~--~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~~~~~~~~~~~~~~ 978 (1005)
|.+.+..+.+..+.... ..++....++..+.+||.+||. +|.+|++. ..+.++|+||||++++|..++...+|..
T Consensus 239 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~-~~~~~ll~h~~~~~~~~~~~~~~~~~~~- 315 (364)
T cd05599 239 FCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGN-NGVNEIKSHPFFKGVDWEHIRERPAPII- 315 (364)
T ss_pred CCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCC-CCHHHHhcCCCcCCCCHHHHhhcCCCCC-
Confidence 99988887777776543 3445555678899999999997 99999975 4599999999999999998876555533
Q ss_pred CCCCCC
Q 001847 979 APLFAT 984 (1005)
Q Consensus 979 ~p~~~~ 984 (1005)
|.+..
T Consensus 316 -~~~~~ 320 (364)
T cd05599 316 -PELKS 320 (364)
T ss_pred -CCCCC
Confidence 54433
No 32
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-42 Score=373.44 Aligned_cols=262 Identities=32% Similarity=0.475 Sum_probs=218.1
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC--eEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT--HVCL 749 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~--~~~l 749 (1005)
..|...+.||+|+||.||++.+..+|..+|+|.+... +....+.+.+|+.+|++++|||||++++...... .+++
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~---~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i 93 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELE---DSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNI 93 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecc---cchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEe
Confidence 4688899999999999999999999999999998765 2222677899999999999999999999755444 6899
Q ss_pred EEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEec-CCcEEEEeccCCcccCCCC
Q 001847 750 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLSCLTSCKP 828 (1005)
Q Consensus 750 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~-~g~vkL~DFG~a~~~~~~~ 828 (1005)
+|||+++|+|.+++....+ .+++..++.+.+||++||+|||++|||||||||+|||++. +|.+||+|||++.......
T Consensus 94 ~mEy~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~ 172 (313)
T KOG0198|consen 94 FMEYAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKG 172 (313)
T ss_pred eeeccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCcccccccccc
Confidence 9999999999999998765 7999999999999999999999999999999999999999 7999999999986543200
Q ss_pred CCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCC-CCh
Q 001847 829 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRG-KTR 906 (1005)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlGvll~eLltG~~Pf~~-~~~ 906 (1005)
..........||+.|||||++... ...+++|||||||++.||+||+.||.. ...
T Consensus 173 ------------------------~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~ 228 (313)
T KOG0198|consen 173 ------------------------TKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEE 228 (313)
T ss_pred ------------------------ccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcch
Confidence 011223456899999999999853 344599999999999999999999987 344
Q ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCC
Q 001847 907 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 965 (1005)
Q Consensus 907 ~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~ 965 (1005)
...+..+........-...++.++++||.+|+..+|++||| |.+||+|||.+.-.
T Consensus 229 ~~~~~~ig~~~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpt----a~eLL~hpf~~~~~ 283 (313)
T KOG0198|consen 229 AEALLLIGREDSLPEIPDSLSDEAKDFLRKCFKRDPEKRPT----AEELLEHPFLKQNS 283 (313)
T ss_pred HHHHHHHhccCCCCCCCcccCHHHHHHHHHHhhcCcccCcC----HHHHhhChhhhccc
Confidence 44444555444211223347889999999999999999999 99999999998743
No 33
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=1.8e-41 Score=391.39 Aligned_cols=314 Identities=36% Similarity=0.676 Sum_probs=241.5
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
++|++++.||+|+||.||++.+..+++.||||++.+...........+.+|+.+++.++||||++++++|...+.+|+||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 37999999999999999999999999999999987654434455667888999999999999999999999999999999
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 831 (1005)
||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..........
T Consensus 81 E~~~gg~L~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 158 (377)
T cd05629 81 EFLPGGDLMTMLIKY--DTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSA 158 (377)
T ss_pred eCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeecccccccccccccc
Confidence 999999999998764 458999999999999999999999999999999999999999999999999985332111000
Q ss_pred -C----Ccchhhhh---cccCCCCCc------------ccccccccccccccCCcccccccccCCCCCChhhHHHHHHHH
Q 001847 832 -L----PTTNEKKR---RHKGQQNPV------------FMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILL 891 (1005)
Q Consensus 832 -~----~~~~~~~~---~~~~~~~~~------------~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll 891 (1005)
+ ........ .......+. +...........+||+.|+|||++.+..++.++|||||||++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil 238 (377)
T cd05629 159 YYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIM 238 (377)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhh
Confidence 0 00000000 000000000 000000011235799999999999988899999999999999
Q ss_pred HHHHcCCCCCCCCChHHHHHHHHh--CCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCChhhh
Q 001847 892 YEMLYGYTPFRGKTRQKTFANILH--KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 969 (1005)
Q Consensus 892 ~eLltG~~Pf~~~~~~~~~~~i~~--~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~~~~~ 969 (1005)
|+|++|..||.+.+..+.+..+.. ..+.++....++.++.+||.+||. +|.+|+.. ..+.++++||||++++|+.+
T Consensus 239 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r-~~~~~~l~hp~~~~~~~~~~ 316 (377)
T cd05629 239 FECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGR-GGAHEIKSHPFFRGVDWDTI 316 (377)
T ss_pred hhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCC-CCHHHHhcCCCcCCCCHHHH
Confidence 999999999998887777777765 334555555678899999999998 78876521 12999999999999999999
Q ss_pred hhcCCCCCCCCCCCCccccccc
Q 001847 970 RCMNPPELDAPLFATDTEKEYK 991 (1005)
Q Consensus 970 ~~~~~~~~~~p~~~~~~~~~~~ 991 (1005)
+...+|-. |.+.......|.
T Consensus 317 ~~~~~~~~--~~~~~~~~~~~~ 336 (377)
T cd05629 317 RQIRAPFI--PQLKSITDTSYF 336 (377)
T ss_pred ccCCCCcc--cCCCCccccccC
Confidence 77666643 555444443343
No 34
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-42 Score=355.36 Aligned_cols=271 Identities=42% Similarity=0.775 Sum_probs=249.2
Q ss_pred ccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001847 668 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 747 (1005)
Q Consensus 668 ~i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 747 (1005)
.+.+++|..++.||.|.||.|-+|+.+.+++.||+|++++..+-.+.....-..|-.+|+.++||++..+...|+..+.+
T Consensus 164 kvTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drl 243 (516)
T KOG0690|consen 164 KVTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRL 243 (516)
T ss_pred eeccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceE
Confidence 45678999999999999999999999999999999999999888888888888899999999999999999999999999
Q ss_pred EEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001847 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (1005)
Q Consensus 748 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 827 (1005)
|+||||.+||.|+-.+.+. ..++++..+.+-..|+.||.|||+++||.||||.+|+|++.+|++||.|||+++..-.
T Consensus 244 CFVMeyanGGeLf~HLsre--r~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~- 320 (516)
T KOG0690|consen 244 CFVMEYANGGELFFHLSRE--RVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIK- 320 (516)
T ss_pred EEEEEEccCceEeeehhhh--hcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhccc-
Confidence 9999999999999888764 5599999999999999999999999999999999999999999999999999854211
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001847 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 907 (1005)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~ 907 (1005)
......++||||.|+|||++....|+.++|-|.+|+++|+|++|++||...+..
T Consensus 321 --------------------------~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~ 374 (516)
T KOG0690|consen 321 --------------------------YGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHE 374 (516)
T ss_pred --------------------------ccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchh
Confidence 112346789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCCh-hcHHHHHcCCCCCCCChhhh
Q 001847 908 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALV 969 (1005)
Q Consensus 908 ~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~hpff~~~~~~~~ 969 (1005)
..+..|+-..+.+|.. ++++++.|+..+|.+||.+|+..- +.|.++.+|+||..++|...
T Consensus 375 kLFeLIl~ed~kFPr~--ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W~~~ 435 (516)
T KOG0690|consen 375 KLFELILMEDLKFPRT--LSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDWEAT 435 (516)
T ss_pred HHHHHHHhhhccCCcc--CCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCHHHH
Confidence 9999999999999875 789999999999999999999764 56999999999999999977
No 35
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=5.1e-41 Score=379.93 Aligned_cols=263 Identities=44% Similarity=0.798 Sum_probs=227.2
Q ss_pred ccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCC
Q 001847 678 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGG 757 (1005)
Q Consensus 678 ~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~gg 757 (1005)
+.||+|+||.||++.+..+++.||+|++.+...........+.+|+.+++.++||||+++++++...+.+|+||||++++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 46899999999999999999999999998765445556677888999999999999999999999999999999999999
Q ss_pred chhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchh
Q 001847 758 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 837 (1005)
Q Consensus 758 sL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~ 837 (1005)
+|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~---------- 148 (328)
T cd05593 81 ELFFHLSRE--RVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITD---------- 148 (328)
T ss_pred CHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCc----------
Confidence 999888764 45899999999999999999999999999999999999999999999999988532110
Q ss_pred hhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCC
Q 001847 838 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKD 917 (1005)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~~i~~~~ 917 (1005)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+.......+....
T Consensus 149 -----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~ 211 (328)
T cd05593 149 -----------------AATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMED 211 (328)
T ss_pred -----------------ccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCC
Confidence 011123579999999999988889999999999999999999999999888777777776666
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCccCCCh-hcHHHHHcCCCCCCCChhhhhh
Q 001847 918 LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRC 971 (1005)
Q Consensus 918 ~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~hpff~~~~~~~~~~ 971 (1005)
..++. .++.++.+||.+||..||.+|++.. +.+.++++||||.+.+|..+..
T Consensus 212 ~~~p~--~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~~~~~~ 264 (328)
T cd05593 212 IKFPR--TLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGVNWQDVYD 264 (328)
T ss_pred ccCCC--CCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCCCHHHHHh
Confidence 65554 4688999999999999999998321 2299999999999999997743
No 36
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=5.7e-41 Score=376.92 Aligned_cols=260 Identities=42% Similarity=0.740 Sum_probs=226.7
Q ss_pred ccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCCch
Q 001847 680 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 759 (1005)
Q Consensus 680 LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ggsL 759 (1005)
||+|+||.||+|.+..+++.||+|.+.............+..|+.++++++||||+++++++...+..|+||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 69999999999999999999999999765444455567788899999999999999999999999999999999999999
Q ss_pred hhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhh
Q 001847 760 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 839 (1005)
Q Consensus 760 ~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~ 839 (1005)
.+++... +.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~------------ 146 (312)
T cd05585 81 FHHLQRE--GRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKD------------ 146 (312)
T ss_pred HHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccC------------
Confidence 9999764 45899999999999999999999999999999999999999999999999998532110
Q ss_pred hcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCC
Q 001847 840 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLK 919 (1005)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~~i~~~~~~ 919 (1005)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+....+.+..+......
T Consensus 147 ---------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~ 211 (312)
T cd05585 147 ---------------DDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLR 211 (312)
T ss_pred ---------------CCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCC
Confidence 01123457999999999999988999999999999999999999999988888888888877665
Q ss_pred CCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCChhhhhh
Q 001847 920 FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRC 971 (1005)
Q Consensus 920 ~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~~~~~~~ 971 (1005)
++. .++..+.+||.+||..||.+||++.. +.++|+||||+..+|..+..
T Consensus 212 ~~~--~~~~~~~~li~~~L~~dp~~R~~~~~-~~e~l~hp~~~~~~~~~~~~ 260 (312)
T cd05585 212 FPD--GFDRDAKDLLIGLLSRDPTRRLGYNG-AQEIKNHPFFSQLSWKKLLM 260 (312)
T ss_pred CCC--cCCHHHHHHHHHHcCCCHHHcCCCCC-HHHHHcCCCcCCCCHHHHHh
Confidence 554 46889999999999999999986432 89999999999999987643
No 37
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1.1e-40 Score=376.57 Aligned_cols=263 Identities=41% Similarity=0.777 Sum_probs=227.1
Q ss_pred ccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCC
Q 001847 678 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGG 757 (1005)
Q Consensus 678 ~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~gg 757 (1005)
+.||+|+||.||++.+..+|+.||+|++.............+.+|+.+++.++||||++++++|...+.+|+||||++++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 46899999999999999999999999998764444455667788999999999999999999999999999999999999
Q ss_pred chhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchh
Q 001847 758 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 837 (1005)
Q Consensus 758 sL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~ 837 (1005)
+|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~---------- 148 (323)
T cd05595 81 ELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD---------- 148 (323)
T ss_pred cHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCC----------
Confidence 999888764 45899999999999999999999999999999999999999999999999987432100
Q ss_pred hhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCC
Q 001847 838 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKD 917 (1005)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~~i~~~~ 917 (1005)
........||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+.......+....
T Consensus 149 -----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~ 211 (323)
T cd05595 149 -----------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE 211 (323)
T ss_pred -----------------CCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC
Confidence 011123579999999999998889999999999999999999999999888877777777776
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCccCCCh-hcHHHHHcCCCCCCCChhhhhh
Q 001847 918 LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRC 971 (1005)
Q Consensus 918 ~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~hpff~~~~~~~~~~ 971 (1005)
..++. .++.++.+||.+||..||.+|++.. ..+.++++||||.+++|..+..
T Consensus 212 ~~~p~--~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~ 264 (323)
T cd05595 212 IRFPR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQ 264 (323)
T ss_pred CCCCC--CCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCCCHHHHHh
Confidence 66554 4688999999999999999998321 1399999999999999997743
No 38
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=7.6e-41 Score=384.66 Aligned_cols=286 Identities=34% Similarity=0.601 Sum_probs=237.4
Q ss_pred ccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001847 668 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 747 (1005)
Q Consensus 668 ~i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 747 (1005)
.+..++|++++.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.++||||+++++++...+.+
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~ 118 (370)
T cd05596 39 RMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYL 118 (370)
T ss_pred CCCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 34567999999999999999999999999999999999764333444455677899999999999999999999999999
Q ss_pred EEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001847 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (1005)
Q Consensus 748 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 827 (1005)
|+||||+++|+|.+++... .+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||++......
T Consensus 119 ~lv~Ey~~gg~L~~~l~~~---~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~ 195 (370)
T cd05596 119 YMVMEYMPGGDLVNLMSNY---DIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDAN 195 (370)
T ss_pred EEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCC
Confidence 9999999999999998653 4889999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC----CCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001847 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA----GHTSAVDWWALGILLYEMLYGYTPFRG 903 (1005)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~----~~~~~sDIwSlGvll~eLltG~~Pf~~ 903 (1005)
. .......+||+.|+|||++... .++.++|||||||++|+|++|+.||.+
T Consensus 196 ~--------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~ 249 (370)
T cd05596 196 G--------------------------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 249 (370)
T ss_pred C--------------------------cccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCC
Confidence 0 0112345799999999998653 367899999999999999999999999
Q ss_pred CChHHHHHHHHhCC--CCCCCCCCCCHHHHHHHHHccccCcCc--cCCChhcHHHHHcCCCCCCCChhhhhhcCCCCCCC
Q 001847 904 KTRQKTFANILHKD--LKFPSSTPTSLHAKQLMYRLLHRDPKS--RLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDA 979 (1005)
Q Consensus 904 ~~~~~~~~~i~~~~--~~~~~~~~~s~~l~~Ll~~~L~~dP~~--Rpt~~~~a~elL~hpff~~~~~~~~~~~~~~~~~~ 979 (1005)
.+....+..+.... +.++....++.++.+||.+||..+|.+ |++ +.++++||||+..+|............+
T Consensus 250 ~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s----~~ell~h~~~~~~~~~~~~~~~~~~~~~ 325 (370)
T cd05596 250 DSLVGTYSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNG----VDEIKSHPFFKNDQWTFDNIRETVAPVV 325 (370)
T ss_pred CCHHHHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCC----HHHHhcCcccCCCChhhHHhcCCCcCcc
Confidence 88888888887643 455665568999999999999999987 999 9999999999998887553333222234
Q ss_pred CCCCCcc
Q 001847 980 PLFATDT 986 (1005)
Q Consensus 980 p~~~~~~ 986 (1005)
|.+..+.
T Consensus 326 p~~~~~~ 332 (370)
T cd05596 326 PELSSDI 332 (370)
T ss_pred CcCCCcc
Confidence 5544433
No 39
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.8e-40 Score=383.39 Aligned_cols=296 Identities=36% Similarity=0.580 Sum_probs=231.7
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 752 (1005)
.|++++.||+|+||+||+|.+..+++.||+|++.+...........+.+|+.+++.++||||+++++++...+.+|+|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 68999999999999999999999999999999987544455566778899999999999999999999999999999999
Q ss_pred ccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001847 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (1005)
Q Consensus 753 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 832 (1005)
|+++|+|.+++... ..+++..++.++.||+.||.|||+.||+||||||+|||++.+|.+||+|||++..........+
T Consensus 82 ~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~ 159 (381)
T cd05626 82 YIPGGDMMSLLIRM--EVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKY 159 (381)
T ss_pred cCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCccccccccccc
Confidence 99999999998764 4589999999999999999999999999999999999999999999999998754321110000
Q ss_pred CcchhhhhcccCC--------------------CCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHH
Q 001847 833 PTTNEKKRRHKGQ--------------------QNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLY 892 (1005)
Q Consensus 833 ~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~ 892 (1005)
............. ................+||+.|+|||++.+..++.++|||||||++|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~ 239 (381)
T cd05626 160 YQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILF 239 (381)
T ss_pred ccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHH
Confidence 0000000000000 00000000011123568999999999999888999999999999999
Q ss_pred HHHcCCCCCCCCChHHHHHHHHh--CCCCCCCCCCCCHHHHHHHHHcccc--CcCccCCChhcHHHHHcCCCCCCCChhh
Q 001847 893 EMLYGYTPFRGKTRQKTFANILH--KDLKFPSSTPTSLHAKQLMYRLLHR--DPKSRLGSHEGANEIKKHPFFKGVNWAL 968 (1005)
Q Consensus 893 eLltG~~Pf~~~~~~~~~~~i~~--~~~~~~~~~~~s~~l~~Ll~~~L~~--dP~~Rpt~~~~a~elL~hpff~~~~~~~ 968 (1005)
+|++|..||...+.......+.. .....+....++.++.+||.+||.. +|..|++ +.++++||||+.++|..
T Consensus 240 elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~----~~~~l~hp~f~~~~~~~ 315 (381)
T cd05626 240 EMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNG----ADDIKAHPFFSEVDFSS 315 (381)
T ss_pred HHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCC----HHHHhcCcccCCCChhH
Confidence 99999999998877766666654 3345555556889999999996654 4555999 99999999999999987
Q ss_pred hhhcCC
Q 001847 969 VRCMNP 974 (1005)
Q Consensus 969 ~~~~~~ 974 (1005)
.....+
T Consensus 316 ~~~~~~ 321 (381)
T cd05626 316 DIRTQP 321 (381)
T ss_pred HhhcCC
Confidence 543333
No 40
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=9.6e-41 Score=385.15 Aligned_cols=297 Identities=38% Similarity=0.634 Sum_probs=232.1
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
++|++++.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.++|+||+++++.|..++.+|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 37999999999999999999999999999999987654333444567788999999999999999999999999999999
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 831 (1005)
||+++++|.+++... +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++..........
T Consensus 81 E~~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~ 158 (376)
T cd05598 81 DYIPGGDMMSLLIRL--GIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSK 158 (376)
T ss_pred eCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccccc
Confidence 999999999999764 458999999999999999999999999999999999999999999999999974322110000
Q ss_pred CCcchhhhhccc--------CCC----CC----cccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHH
Q 001847 832 LPTTNEKKRRHK--------GQQ----NP----VFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML 895 (1005)
Q Consensus 832 ~~~~~~~~~~~~--------~~~----~~----~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLl 895 (1005)
........+... ... .+ .............+||+.|+|||++.+..++.++|||||||++|+|+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell 238 (376)
T cd05598 159 YYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 238 (376)
T ss_pred ccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehh
Confidence 000000000000 000 00 00000011123468999999999999988999999999999999999
Q ss_pred cCCCCCCCCChHHHHHHHHhC--CCCCCCCCCCCHHHHHHHHHccccCcCccC---CChhcHHHHHcCCCCCCCChhhhh
Q 001847 896 YGYTPFRGKTRQKTFANILHK--DLKFPSSTPTSLHAKQLMYRLLHRDPKSRL---GSHEGANEIKKHPFFKGVNWALVR 970 (1005)
Q Consensus 896 tG~~Pf~~~~~~~~~~~i~~~--~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rp---t~~~~a~elL~hpff~~~~~~~~~ 970 (1005)
+|+.||.+....+....+... ....+....++..+.+||.+|+ .+|.+|+ + +.++++||||+.++|..+.
T Consensus 239 ~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t----~~ell~h~~~~~~~~~~~~ 313 (376)
T cd05598 239 VGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNG----ADEIKAHPFFKGIDFASLI 313 (376)
T ss_pred hCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCC----HHHHhCCCCcCCCCHHHHh
Confidence 999999988877766666543 2334444567889999999977 5999999 6 9999999999999999884
Q ss_pred -hcCCC
Q 001847 971 -CMNPP 975 (1005)
Q Consensus 971 -~~~~~ 975 (1005)
...+|
T Consensus 314 ~~~~~~ 319 (376)
T cd05598 314 RRQKAP 319 (376)
T ss_pred hcCCCC
Confidence 33344
No 41
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=1.1e-40 Score=382.27 Aligned_cols=297 Identities=37% Similarity=0.683 Sum_probs=236.0
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
++|++++.||+|+||.||+|.+..+++.||+|++.............+..|+.++..++|++|++++++|...+.+|+||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 47999999999999999999999999999999998654444555677888999999999999999999999999999999
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 831 (1005)
||++|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.++|+|||++..........
T Consensus 81 E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~ 158 (360)
T cd05627 81 EFLPGGDMMTLLMKK--DTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTE 158 (360)
T ss_pred eCCCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccccc
Confidence 999999999998764 458999999999999999999999999999999999999999999999999986442211100
Q ss_pred CC------cchhhhh-cc-cCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001847 832 LP------TTNEKKR-RH-KGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 903 (1005)
Q Consensus 832 ~~------~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~ 903 (1005)
.. ....... .. ...................+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~ 238 (360)
T cd05627 159 FYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (360)
T ss_pred cccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCC
Confidence 00 0000000 00 0000000000001112346899999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHhC--CCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCChhhhhhc
Q 001847 904 KTRQKTFANILHK--DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCM 972 (1005)
Q Consensus 904 ~~~~~~~~~i~~~--~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~~~~~~~~ 972 (1005)
.+....+..+... .+.++....++..+++||.+|+. ||.+|++.. .+.++++||||++++|..+...
T Consensus 239 ~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~-~~~ei~~hp~f~~~~~~~~~~~ 307 (360)
T cd05627 239 ETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGSN-GVEEIKSHPFFEGVDWGHIRER 307 (360)
T ss_pred CCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCC-CHHHHhcCCCCCCCCHHHHhcC
Confidence 8888877777753 34455555678899999999874 999999632 3899999999999999998654
No 42
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=4.1e-40 Score=370.47 Aligned_cols=311 Identities=59% Similarity=1.016 Sum_probs=254.9
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
++|++.+.||+|++|.||+|.+..+++.||+|.+.............+..|+++++.++|+||+++++.+......|+||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 37999999999999999999999999999999998765444456678889999999999999999999999999999999
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 831 (1005)
||+.+++|.+++.......+++..++.++.||+.||+|||+.|++|+||||+||+++.++.++|+|||++..........
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~ 160 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPV 160 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhccccccccc
Confidence 99999999999987655679999999999999999999999999999999999999999999999999986543221110
Q ss_pred CCcchhhhhcc--cCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001847 832 LPTTNEKKRRH--KGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 909 (1005)
Q Consensus 832 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~ 909 (1005)
........... ....................|+..|+|||++.+..++.++||||||+++|+|++|..||.+.+....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~ 240 (316)
T cd05574 161 SKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDET 240 (316)
T ss_pred ccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHH
Confidence 00000000000 0000000011112223456789999999999988889999999999999999999999998888777
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCChhhhhhcCCCCCCCCCC
Q 001847 910 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLF 982 (1005)
Q Consensus 910 ~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~~~~~~~~~~~~~~~p~~ 982 (1005)
+..+......++.....+..+.+||.+||..+|++||+++..++++|+||||++.+|..++-.-+|..+.|..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (316)
T cd05574 241 FSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGVNWALIRHTTPPIIPRPDD 313 (316)
T ss_pred HHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcCChhhcccCCCCCCCCccc
Confidence 8778777777766656789999999999999999999999999999999999999999999888888766544
No 43
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=5.6e-41 Score=380.01 Aligned_cols=279 Identities=37% Similarity=0.678 Sum_probs=237.7
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
++|.+.+.||+|+||.||+|.+..+++.||+|+++............+..|+.+++.++|+||+++++++...+.+|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 37999999999999999999999999999999998764444455667788999999999999999999999999999999
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 831 (1005)
||+++++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++........
T Consensus 81 e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~-- 157 (330)
T cd05601 81 EYQPGGDLLSLLNRYE-DQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKM-- 157 (330)
T ss_pred CCCCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCc--
Confidence 9999999999997652 4599999999999999999999999999999999999999999999999999854321110
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCccccccccc------CCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001847 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA------GAGHTSAVDWWALGILLYEMLYGYTPFRGKT 905 (1005)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~------~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~ 905 (1005)
.......||+.|+|||++. ...++.++|||||||++|+|++|+.||....
T Consensus 158 ------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~ 213 (330)
T cd05601 158 ------------------------VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGT 213 (330)
T ss_pred ------------------------eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCC
Confidence 0112346899999999986 4556789999999999999999999999888
Q ss_pred hHHHHHHHHhCC--CCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCChhhhhhcCCCCCCCCCCC
Q 001847 906 RQKTFANILHKD--LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFA 983 (1005)
Q Consensus 906 ~~~~~~~i~~~~--~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~~~~~~~~~~~~~~~p~~~ 983 (1005)
....+..+.... ..++.....+..+.+||.+||+ +|.+||+ ++++++||||+.++|..+....+|.. |.+.
T Consensus 214 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t----~~~l~~h~~~~~~~~~~~~~~~~~~~--~~~~ 286 (330)
T cd05601 214 SAKTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLG----YEGLCCHPFFSKIDWNNIRNSLPPFV--PTLK 286 (330)
T ss_pred HHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCC----HHHHhCCCCcCCCCHHHHhhCCCCcc--CcCC
Confidence 877777776542 4455555678899999999998 9999999 99999999999999999987666543 5444
Q ss_pred C
Q 001847 984 T 984 (1005)
Q Consensus 984 ~ 984 (1005)
+
T Consensus 287 ~ 287 (330)
T cd05601 287 S 287 (330)
T ss_pred C
Confidence 3
No 44
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5e-42 Score=347.66 Aligned_cols=266 Identities=31% Similarity=0.517 Sum_probs=230.2
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccC-----hHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeC
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN-----RNKVHRACAEREILDML-DHPFVPALYASFQTK 744 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~-----~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~ 744 (1005)
...|...+.||.|..++|-++.++.+|+.+|+|++....... ....+.-..|+.||+++ .||+|+++.++|+.+
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~ 95 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD 95 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence 457888899999999999999999999999999987532221 22334455799999998 899999999999999
Q ss_pred CeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCccc
Q 001847 745 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 824 (1005)
Q Consensus 745 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~ 824 (1005)
..+++|+|.|+.|.|++++... -.+++...+.||+||++|+.|||.++||||||||+|||++++-++||+|||+|+..
T Consensus 96 sF~FlVFdl~prGELFDyLts~--VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l 173 (411)
T KOG0599|consen 96 AFVFLVFDLMPRGELFDYLTSK--VTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQL 173 (411)
T ss_pred chhhhhhhhcccchHHHHhhhh--eeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeecc
Confidence 9999999999999999999764 45999999999999999999999999999999999999999999999999999765
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC------CCCCChhhHHHHHHHHHHHHcCC
Q 001847 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG------AGHTSAVDWWALGILLYEMLYGY 898 (1005)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~------~~~~~~sDIwSlGvll~eLltG~ 898 (1005)
... ..-...||||+|+|||.+.. ..|+..+|+|++|+++|.|+.|+
T Consensus 174 ~~G----------------------------ekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGc 225 (411)
T KOG0599|consen 174 EPG----------------------------EKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGC 225 (411)
T ss_pred CCc----------------------------hhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCC
Confidence 421 12235799999999999843 45777999999999999999999
Q ss_pred CCCCCCChHHHHHHHHhCCCCCC--CCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCChhhhh
Q 001847 899 TPFRGKTRQKTFANILHKDLKFP--SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVR 970 (1005)
Q Consensus 899 ~Pf~~~~~~~~~~~i~~~~~~~~--~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~~~~~~ 970 (1005)
+||......-.+..|+.+...+. .+..++...++||.+||+.||.+|+| ++++|.||||..+-....+
T Consensus 226 pPFwHRkQmlMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Rit----ake~LaHpff~q~~~~~~r 295 (411)
T KOG0599|consen 226 PPFWHRKQMLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRIT----AKEALAHPFFIQIAQQQAR 295 (411)
T ss_pred CchhHHHHHHHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhccc----HHHHhcChHHHHHHHhccc
Confidence 99999988888999999887664 45778899999999999999999999 9999999999765443333
No 45
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=1.5e-40 Score=374.93 Aligned_cols=265 Identities=38% Similarity=0.732 Sum_probs=226.9
Q ss_pred ccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEEEEEeccCC
Q 001847 678 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 756 (1005)
Q Consensus 678 ~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lV~E~~~g 756 (1005)
+.||+|+||.||+|.+..+++.||+|++.+...........+..|..++..+ +||||+++++++...+.+|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 4689999999999999999999999999865433444556677888888876 799999999999999999999999999
Q ss_pred CchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 001847 757 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 836 (1005)
Q Consensus 757 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 836 (1005)
++|..++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 g~L~~~i~~~--~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~--------- 149 (320)
T cd05590 81 GDLMFHIQKS--RRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFN--------- 149 (320)
T ss_pred chHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcC---------
Confidence 9999988764 45899999999999999999999999999999999999999999999999987432100
Q ss_pred hhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhC
Q 001847 837 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 916 (1005)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~~i~~~ 916 (1005)
........||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+..+...
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~ 211 (320)
T cd05590 150 ------------------GKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILND 211 (320)
T ss_pred ------------------CCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcC
Confidence 01122357999999999999888999999999999999999999999998888888888877
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCccCCChh--cHHHHHcCCCCCCCChhhhhhcC
Q 001847 917 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE--GANEIKKHPFFKGVNWALVRCMN 973 (1005)
Q Consensus 917 ~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~--~a~elL~hpff~~~~~~~~~~~~ 973 (1005)
...++. .++.++.+||.+||+.||.+||+... ..+++++||||+.++|..+....
T Consensus 212 ~~~~~~--~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~~~~~~~~~~ 268 (320)
T cd05590 212 EVVYPT--WLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKELDWEKLNRRQ 268 (320)
T ss_pred CCCCCC--CCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCCCHHHHHhCC
Confidence 665554 36889999999999999999999432 23899999999999999875433
No 46
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=2.3e-40 Score=374.05 Aligned_cols=270 Identities=35% Similarity=0.692 Sum_probs=231.8
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCC-CCcceEEEEEEeCCeEEEEE
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH-PFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~h-pnIv~l~~~~~~~~~~~lV~ 751 (1005)
+|++++.||+|+||.||+|.+..+++.||+|++.+...........+..|+.++..+.| ++|+.++++|...+.+|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 48999999999999999999999999999999987544444556677889999999976 46889999999999999999
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 831 (1005)
||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||++......
T Consensus 81 E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~---- 154 (324)
T cd05587 81 EYVNGGDLMYHIQQV--GKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG---- 154 (324)
T ss_pred cCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCC----
Confidence 999999999998764 45899999999999999999999999999999999999999999999999987431100
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001847 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 911 (1005)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~ 911 (1005)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+.
T Consensus 155 -----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~ 211 (324)
T cd05587 155 -----------------------GKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQ 211 (324)
T ss_pred -----------------------CCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 011234579999999999999889999999999999999999999999988888888
Q ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCCh-hcHHHHHcCCCCCCCChhhhhhcC
Q 001847 912 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMN 973 (1005)
Q Consensus 912 ~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~hpff~~~~~~~~~~~~ 973 (1005)
.+......++. .++..+.+|+.+||..||.+|++.. ....++++||||+.++|..+....
T Consensus 212 ~i~~~~~~~~~--~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~~~~~~~~~~ 272 (324)
T cd05587 212 SIMEHNVSYPK--SLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRIDWEKLERRE 272 (324)
T ss_pred HHHcCCCCCCC--CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCCCHHHHHhCC
Confidence 88877665554 4688999999999999999999853 335899999999999999775443
No 47
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-42 Score=403.70 Aligned_cols=287 Identities=38% Similarity=0.687 Sum_probs=256.5
Q ss_pred ccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001847 668 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 747 (1005)
Q Consensus 668 ~i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 747 (1005)
++..++|.+++.||.|+||.|.+|+++.+++.||+|++.+-.+.......-|..|..+|...+++=|+.++..|.++.++
T Consensus 71 rl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~L 150 (1317)
T KOG0612|consen 71 RLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYL 150 (1317)
T ss_pred hCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccce
Confidence 45678999999999999999999999999999999999987666667777888899999999999999999999999999
Q ss_pred EEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001847 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (1005)
Q Consensus 748 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 827 (1005)
|+|||||+||+|..++.+.. .++++.+++|+..|+.||.-||+.|.|||||||+|||++.+|++||+|||.+-.+..+
T Consensus 151 YlVMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~d 228 (1317)
T KOG0612|consen 151 YLVMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDAD 228 (1317)
T ss_pred EEEEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcCCC
Confidence 99999999999999998753 6999999999999999999999999999999999999999999999999988665432
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-----CCCCChhhHHHHHHHHHHHHcCCCCCC
Q 001847 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLYGYTPFR 902 (1005)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-----~~~~~~sDIwSlGvll~eLltG~~Pf~ 902 (1005)
. ...+...+|||-|++||+|.. +.|+..+|-||+||++|||++|..||.
T Consensus 229 G--------------------------~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFY 282 (1317)
T KOG0612|consen 229 G--------------------------TVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFY 282 (1317)
T ss_pred C--------------------------cEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcch
Confidence 2 234556789999999999943 457889999999999999999999999
Q ss_pred CCChHHHHHHHHhC--CCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCChhhhhhcCCCCCCCC
Q 001847 903 GKTRQKTFANILHK--DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAP 980 (1005)
Q Consensus 903 ~~~~~~~~~~i~~~--~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~~~~~~~~~~~~~~~p 980 (1005)
..+-.+.|.+|+.- .+.+|....+|.++++||.++++ +|+.|.. +..+.++..||||.+++|.-+|...||-. |
T Consensus 283 adslveTY~KIm~hk~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLg-rngiedik~HpFF~g~~W~~iR~~~pP~v--P 358 (1317)
T KOG0612|consen 283 ADSLVETYGKIMNHKESLSFPDETDVSEEAKDLIEALLC-DREVRLG-RNGIEDIKNHPFFEGIDWDNIRESVPPVV--P 358 (1317)
T ss_pred HHHHHHHHHHHhchhhhcCCCcccccCHHHHHHHHHHhc-Chhhhcc-cccHHHHHhCccccCCChhhhhhcCCCCC--C
Confidence 99999999999864 78888777799999999999998 7788987 56699999999999999999999999955 7
Q ss_pred CCCCcc
Q 001847 981 LFATDT 986 (1005)
Q Consensus 981 ~~~~~~ 986 (1005)
-++-|.
T Consensus 359 evssd~ 364 (1317)
T KOG0612|consen 359 EVSSDD 364 (1317)
T ss_pred cCCCCC
Confidence 655443
No 48
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-41 Score=357.68 Aligned_cols=261 Identities=27% Similarity=0.422 Sum_probs=222.5
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEe-----CCe
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT-----KTH 746 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-----~~~ 746 (1005)
..|..++.||.|+||.|+.+.++.+|..||+|.+... +......++..+|+++|+.++|+||+.+++.+.. -+.
T Consensus 22 ~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~-F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~D 100 (359)
T KOG0660|consen 22 RYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNP-FENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFND 100 (359)
T ss_pred ceecccccccCcceeeEEEEEEcCCCCEeehhhhhhh-hhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccce
Confidence 4666689999999999999999999999999988753 4566778899999999999999999999999875 457
Q ss_pred EEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 001847 747 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 826 (1005)
Q Consensus 747 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~ 826 (1005)
+|+|+|+| +.+|...++.+ ..+++.+++.++.||++||+|+|+.||+||||||+|+|++.+..+||+|||+|+....
T Consensus 101 vYiV~elM-etDL~~iik~~--~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~ 177 (359)
T KOG0660|consen 101 VYLVFELM-ETDLHQIIKSQ--QDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDK 177 (359)
T ss_pred eEEehhHH-hhHHHHHHHcC--ccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeeccc
Confidence 99999999 89999999875 3499999999999999999999999999999999999999999999999999977643
Q ss_pred CCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001847 827 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKT 905 (1005)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlGvll~eLltG~~Pf~~~~ 905 (1005)
... ....+.++.|.+|+|||++.. ..|+...||||+||++.||++|++.|.|.+
T Consensus 178 ~~~-------------------------~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d 232 (359)
T KOG0660|consen 178 FFE-------------------------DGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKD 232 (359)
T ss_pred cCc-------------------------ccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCc
Confidence 200 112245688999999999754 578999999999999999999999999988
Q ss_pred hHHHHHHHHhC-----------------------CCCCC------CCCCCCHHHHHHHHHccccCcCccCCChhcHHHHH
Q 001847 906 RQKTFANILHK-----------------------DLKFP------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 956 (1005)
Q Consensus 906 ~~~~~~~i~~~-----------------------~~~~~------~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL 956 (1005)
...++..|+.- ....+ ..+..++.+.+|+.+||..||.+|+| ++++|
T Consensus 233 ~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRit----a~eAL 308 (359)
T KOG0660|consen 233 YVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRIT----AEEAL 308 (359)
T ss_pred hHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCC----HHHHh
Confidence 87777666441 11111 12456778999999999999999999 99999
Q ss_pred cCCCCCCCC
Q 001847 957 KHPFFKGVN 965 (1005)
Q Consensus 957 ~hpff~~~~ 965 (1005)
+||||..+.
T Consensus 309 ~hPYl~~~h 317 (359)
T KOG0660|consen 309 AHPYLAPYH 317 (359)
T ss_pred cChhhhhhc
Confidence 999999753
No 49
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=2.1e-40 Score=374.43 Aligned_cols=266 Identities=41% Similarity=0.773 Sum_probs=227.9
Q ss_pred ccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHH---HhCCCCCcceEEEEEEeCCeEEEE
Q 001847 674 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREIL---DMLDHPFVPALYASFQTKTHVCLI 750 (1005)
Q Consensus 674 y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il---~~l~hpnIv~l~~~~~~~~~~~lV 750 (1005)
|++++.||+|+||.||+|.+..+++.||+|++++...........+..|+.++ +.++||||+++++++...+.+|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 78899999999999999999999999999999865433344455666676655 456899999999999999999999
Q ss_pred EeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001847 751 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (1005)
Q Consensus 751 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 830 (1005)
|||+.+++|..++.. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~E~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~--- 154 (324)
T cd05589 81 MEYAAGGDLMMHIHT---DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGF--- 154 (324)
T ss_pred EcCCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCC---
Confidence 999999999888754 35899999999999999999999999999999999999999999999999987432100
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001847 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 910 (1005)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~ 910 (1005)
.......+|++.|+|||.+.+..++.++|||||||++|+|++|+.||.+.+.....
T Consensus 155 ------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~ 210 (324)
T cd05589 155 ------------------------GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVF 210 (324)
T ss_pred ------------------------CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 01123467999999999999888999999999999999999999999998888888
Q ss_pred HHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChh-cHHHHHcCCCCCCCChhhhhh
Q 001847 911 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANEIKKHPFFKGVNWALVRC 971 (1005)
Q Consensus 911 ~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~-~a~elL~hpff~~~~~~~~~~ 971 (1005)
..+......++. .++..+.+||.+||..||.+||++.+ .+.++++||||+.++|.....
T Consensus 211 ~~i~~~~~~~p~--~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~~~~~~~~ 270 (324)
T cd05589 211 DSIVNDEVRYPR--FLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDINWDDLLA 270 (324)
T ss_pred HHHHhCCCCCCC--CCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCCCHHHHHh
Confidence 888777665554 36888999999999999999996543 499999999999999997743
No 50
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=7.1e-41 Score=382.25 Aligned_cols=305 Identities=41% Similarity=0.726 Sum_probs=244.8
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
++|++++.||+|+||.||+|.+..+++.||+|++.............+..|+.++..++|+||+++++++...+.+|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 47999999999999999999999999999999998754444455667888999999999999999999999999999999
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 831 (1005)
||+.+++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..........
T Consensus 81 e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~ 158 (350)
T cd05573 81 EYMPGGDLMNLLIRK--DVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDRE 158 (350)
T ss_pred cCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCccc
Confidence 999999999999765 459999999999999999999999999999999999999999999999999986554322100
Q ss_pred CCcchhhhh--cccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001847 832 LPTTNEKKR--RHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 909 (1005)
Q Consensus 832 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~ 909 (1005)
......... ......................||+.|+|||++.+..++.++|||||||++|+|++|+.||.+......
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~ 238 (350)
T cd05573 159 YYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQET 238 (350)
T ss_pred ccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHH
Confidence 000000000 000000000000111123345799999999999999999999999999999999999999999888877
Q ss_pred HHHHHh--CCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCChhhhhhcCCCCCCCCCCCC
Q 001847 910 FANILH--KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFAT 984 (1005)
Q Consensus 910 ~~~i~~--~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~~~~~~~~~~~~~~~p~~~~ 984 (1005)
...+.. ....++....++..+.+||.+||. ||.+|++. +.++++||||+.++|.......+|.. |.++.
T Consensus 239 ~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s---~~~ll~hp~~~~~~~~~~~~~~~~~~--~~~~~ 309 (350)
T cd05573 239 YNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGS---FEEIKSHPFFKGIDWENLRETKPPFV--PELSS 309 (350)
T ss_pred HHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCC---HHHHhcCCCcCCCCHHHHhhCCCCcC--CCCCC
Confidence 777776 555566665678999999999998 99999985 88999999999999998876556544 55444
No 51
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=3.4e-41 Score=351.51 Aligned_cols=263 Identities=23% Similarity=0.348 Sum_probs=222.7
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEe--CCeEE
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT--KTHVC 748 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~~~~~ 748 (1005)
.+.|+.+..|++|+||.||+|+|+.|+..||+|.++.... .....---.+||.+|.+++|||||.+.++... -+.+|
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmeke-k~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy 153 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKE-KEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIY 153 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccc-cCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceee
Confidence 4689999999999999999999999999999999986532 22223345789999999999999999998764 46799
Q ss_pred EEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 001847 749 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 828 (1005)
Q Consensus 749 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~ 828 (1005)
+||||| .-+|..++.... .++...+++.++.|++.||+|||.+.|+||||||+|+|++..|.+||+|||+|+..+...
T Consensus 154 ~VMe~~-EhDLksl~d~m~-q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~ 231 (419)
T KOG0663|consen 154 IVMEYV-EHDLKSLMETMK-QPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPL 231 (419)
T ss_pred eeHHHH-HhhHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCCc
Confidence 999999 678999988764 569999999999999999999999999999999999999999999999999997765321
Q ss_pred CCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001847 829 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 907 (1005)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~ 907 (1005)
......+.|.+|+|||.|.+. .|+.+.|+||+|||+.||+++++.|.|....
T Consensus 232 ---------------------------k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~ 284 (419)
T KOG0663|consen 232 ---------------------------KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEI 284 (419)
T ss_pred ---------------------------ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchH
Confidence 223456889999999999885 5888999999999999999999999999999
Q ss_pred HHHHHHHhC-----C--------------CCCCCC-----------CCCCHHHHHHHHHccccCcCccCCChhcHHHHHc
Q 001847 908 KTFANILHK-----D--------------LKFPSS-----------TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 957 (1005)
Q Consensus 908 ~~~~~i~~~-----~--------------~~~~~~-----------~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 957 (1005)
+++.+|.+. . +.++.. ..++....+|+..+|.+||.+|.| |.+.|+
T Consensus 285 dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~t----A~~~L~ 360 (419)
T KOG0663|consen 285 DQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRIT----AEDGLK 360 (419)
T ss_pred HHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCcccccc----HHHhhc
Confidence 888888652 0 111110 114567789999999999999999 999999
Q ss_pred CCCCCCCChh
Q 001847 958 HPFFKGVNWA 967 (1005)
Q Consensus 958 hpff~~~~~~ 967 (1005)
|+||.....+
T Consensus 361 h~~F~e~P~p 370 (419)
T KOG0663|consen 361 HEYFRETPLP 370 (419)
T ss_pred ccccccCCCC
Confidence 9999985443
No 52
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=2.6e-40 Score=382.40 Aligned_cols=293 Identities=38% Similarity=0.646 Sum_probs=231.8
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 752 (1005)
.|++++.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.++|+||++++++|...+.+|+|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 68999999999999999999999999999999986544445556778899999999999999999999999999999999
Q ss_pred ccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001847 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (1005)
Q Consensus 753 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 832 (1005)
|+++|+|.+++.+. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++..........+
T Consensus 82 ~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~ 159 (382)
T cd05625 82 YIPGGDMMSLLIRM--GIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKY 159 (382)
T ss_pred CCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCccccccccccc
Confidence 99999999998764 4589999999999999999999999999999999999999999999999999753321111000
Q ss_pred Ccchhhhhccc----CC-CCC---------------cccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHH
Q 001847 833 PTTNEKKRRHK----GQ-QNP---------------VFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLY 892 (1005)
Q Consensus 833 ~~~~~~~~~~~----~~-~~~---------------~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~ 892 (1005)
....+..+... .. ..+ .............+||+.|+|||++.+..++.++|||||||++|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~ 239 (382)
T cd05625 160 YQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 239 (382)
T ss_pred cccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHH
Confidence 00000000000 00 000 00000011123468999999999999989999999999999999
Q ss_pred HHHcCCCCCCCCChHHHHHHHHhC--CCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCChhhh
Q 001847 893 EMLYGYTPFRGKTRQKTFANILHK--DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 969 (1005)
Q Consensus 893 eLltG~~Pf~~~~~~~~~~~i~~~--~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~~~~~ 969 (1005)
+|++|+.||.+.+..+....+... ....+....++.++.+||.+|+ .+|.+|++ ...+.++++||||+.++|...
T Consensus 240 elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~-~~~~~ei~~hp~f~~~~~~~~ 316 (382)
T cd05625 240 EMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLG-KNGADEIKAHPFFKTIDFSSD 316 (382)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCC-CCCHHHHhcCCCcCCcChHHH
Confidence 999999999988877777666653 3444555567889999999986 59999997 334899999999999999864
No 53
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=2.5e-40 Score=373.20 Aligned_cols=266 Identities=39% Similarity=0.747 Sum_probs=228.3
Q ss_pred ccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEEEEEeccCC
Q 001847 678 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 756 (1005)
Q Consensus 678 ~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lV~E~~~g 756 (1005)
+.||+|+||.||+|.+..+++.||+|++.+...........+..|..++..+ +||||++++++|...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 4689999999999999999999999999875444445556677888888876 899999999999999999999999999
Q ss_pred CchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 001847 757 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 836 (1005)
Q Consensus 757 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 836 (1005)
++|..++... ..+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||++......
T Consensus 81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~--------- 149 (321)
T cd05591 81 GDLMFQIQRS--RKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILN--------- 149 (321)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccC---------
Confidence 9999988764 45899999999999999999999999999999999999999999999999988532110
Q ss_pred hhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhC
Q 001847 837 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 916 (1005)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~~i~~~ 916 (1005)
........|++.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+..+...
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~ 211 (321)
T cd05591 150 ------------------GVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHD 211 (321)
T ss_pred ------------------CccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcC
Confidence 01122456999999999999888999999999999999999999999999888888888877
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCccCCChh---cHHHHHcCCCCCCCChhhhhhcCC
Q 001847 917 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE---GANEIKKHPFFKGVNWALVRCMNP 974 (1005)
Q Consensus 917 ~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~---~a~elL~hpff~~~~~~~~~~~~~ 974 (1005)
...++. .++.++.+||.+||..||.+|++..+ .+.++++||||..++|..+.....
T Consensus 212 ~~~~p~--~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~~~~~~~~~~~ 270 (321)
T cd05591 212 DVLYPV--WLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEIDWVLLEQRKI 270 (321)
T ss_pred CCCCCC--CCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCCCHHHHHhCCC
Confidence 665554 36789999999999999999994332 399999999999999998855443
No 54
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=2.6e-40 Score=373.43 Aligned_cols=263 Identities=41% Similarity=0.749 Sum_probs=225.5
Q ss_pred ccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHH-HHHhCCCCCcceEEEEEEeCCeEEEEEeccCC
Q 001847 678 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAERE-ILDMLDHPFVPALYASFQTKTHVCLITDYCPG 756 (1005)
Q Consensus 678 ~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~-il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~g 756 (1005)
+.||+|+||.||++.+..+|+.||+|++.+...........+..|.. +++.++||||+++++++...+.+|+||||+.+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 46899999999999999999999999997654333344455555655 56788999999999999999999999999999
Q ss_pred CchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 001847 757 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 836 (1005)
Q Consensus 757 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 836 (1005)
++|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++......
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~--------- 149 (323)
T cd05575 81 GELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH--------- 149 (323)
T ss_pred CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccC---------
Confidence 9999998764 45899999999999999999999999999999999999999999999999987432100
Q ss_pred hhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhC
Q 001847 837 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 916 (1005)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~~i~~~ 916 (1005)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.+..+...
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~ 211 (323)
T cd05575 150 ------------------SKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNK 211 (323)
T ss_pred ------------------CCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcC
Confidence 01123457999999999999988999999999999999999999999998888888888776
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCChhhhhh
Q 001847 917 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRC 971 (1005)
Q Consensus 917 ~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~~~~~~~ 971 (1005)
....+. ..+..+.+||.+||+.||.+||+..+.+.++++||||..++|..+..
T Consensus 212 ~~~~~~--~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~~~~~~~~ 264 (323)
T cd05575 212 PLRLKP--NISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSINWDDLVN 264 (323)
T ss_pred CCCCCC--CCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCCCHHHHhh
Confidence 655443 46889999999999999999999887789999999999999988743
No 55
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2e-41 Score=358.76 Aligned_cols=255 Identities=30% Similarity=0.551 Sum_probs=232.8
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 750 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 750 (1005)
..+|++.+.||.|.||.|-+|.+...|+.||||.+++..+.+....-.+.+||+||..|+||||+.+|++|++.+.+.||
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence 46899999999999999999999999999999999999888888899999999999999999999999999999999999
Q ss_pred EeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001847 751 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (1005)
Q Consensus 751 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 830 (1005)
|||..+|.|++|+... +.|++...+.+++||+.|+.|+|+++++|||||.+|||++.|+++||.|||++.......
T Consensus 132 MEYaS~GeLYDYiSer--~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~k-- 207 (668)
T KOG0611|consen 132 MEYASGGELYDYISER--GSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKK-- 207 (668)
T ss_pred EEecCCccHHHHHHHh--ccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhcccc--
Confidence 9999999999999875 569999999999999999999999999999999999999999999999999985543221
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCC-CChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001847 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKTRQKT 909 (1005)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~-~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~ 909 (1005)
.-.++||+|.|.+||+..+.+| ++.+|.||||++||-|+.|..||+|.+....
T Consensus 208 --------------------------fLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~l 261 (668)
T KOG0611|consen 208 --------------------------FLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRL 261 (668)
T ss_pred --------------------------HHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHH
Confidence 2246899999999999999887 5689999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCC
Q 001847 910 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 962 (1005)
Q Consensus 910 ~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~ 962 (1005)
+..|..+...-|.. +..+..||+.||..||+.|.| +.++-.|=|+.
T Consensus 262 vrQIs~GaYrEP~~---PSdA~gLIRwmLmVNP~RRAT----ieDiAsHWWvN 307 (668)
T KOG0611|consen 262 VRQISRGAYREPET---PSDASGLIRWMLMVNPERRAT----IEDIASHWWVN 307 (668)
T ss_pred HHHhhcccccCCCC---CchHHHHHHHHHhcCcccchh----HHHHhhhheee
Confidence 99998886655543 446778999999999999999 99999998865
No 56
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=1.8e-40 Score=375.08 Aligned_cols=263 Identities=43% Similarity=0.785 Sum_probs=225.9
Q ss_pred ccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCC
Q 001847 678 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGG 757 (1005)
Q Consensus 678 ~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~gg 757 (1005)
+.||+|+||.||+|.+..+++.||+|++.+...........+..|+.+++.++||||++++++|...+.+|+||||+.++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 46899999999999999999999999998765444555667788999999999999999999999999999999999999
Q ss_pred chhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 001847 758 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 836 (1005)
Q Consensus 758 sL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~-~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 836 (1005)
+|..++... ..+++..++.++.||+.||.|||+ +||+||||||+|||++.+|.+||+|||++......
T Consensus 81 ~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~--------- 149 (325)
T cd05594 81 ELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD--------- 149 (325)
T ss_pred cHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCC---------
Confidence 999988764 458999999999999999999997 79999999999999999999999999987432100
Q ss_pred hhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhC
Q 001847 837 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 916 (1005)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~~i~~~ 916 (1005)
........||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.......+...
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~ 211 (325)
T cd05594 150 ------------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME 211 (325)
T ss_pred ------------------CcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcC
Confidence 01112357999999999998888999999999999999999999999988877777777766
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCccCCCh-hcHHHHHcCCCCCCCChhhhhh
Q 001847 917 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRC 971 (1005)
Q Consensus 917 ~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~hpff~~~~~~~~~~ 971 (1005)
...++. .++.++.+||.+||..||.+|++.. +.+.++++||||+++.|.....
T Consensus 212 ~~~~p~--~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~~~~~~ 265 (325)
T cd05594 212 EIRFPR--TLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGIVWQDVYE 265 (325)
T ss_pred CCCCCC--CCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCCCHHHHHh
Confidence 666554 3688999999999999999998321 1299999999999999997743
No 57
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=2.2e-40 Score=380.53 Aligned_cols=268 Identities=35% Similarity=0.660 Sum_probs=226.7
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 001847 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 748 (1005)
Q Consensus 669 i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 748 (1005)
+..++|++++.||+|+||.||++.+..+++.||+|++.+...........+.+|+.+++.++||||+++++++..++.+|
T Consensus 40 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~ 119 (370)
T cd05621 40 MKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLY 119 (370)
T ss_pred CCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEE
Confidence 34578999999999999999999999999999999997644334444556778999999999999999999999999999
Q ss_pred EEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 001847 749 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 828 (1005)
Q Consensus 749 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~ 828 (1005)
+||||+++|+|.+++... .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 120 lv~Ey~~gg~L~~~l~~~---~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~ 196 (370)
T cd05621 120 MVMEYMPGGDLVNLMSNY---DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETG 196 (370)
T ss_pred EEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccCC
Confidence 999999999999999653 48899999999999999999999999999999999999999999999999985432110
Q ss_pred CCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCC----CCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001847 829 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG----HTSAVDWWALGILLYEMLYGYTPFRGK 904 (1005)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~----~~~~sDIwSlGvll~eLltG~~Pf~~~ 904 (1005)
.......+||+.|+|||++.... ++.++|||||||++|+|++|+.||.+.
T Consensus 197 --------------------------~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~ 250 (370)
T cd05621 197 --------------------------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYAD 250 (370)
T ss_pred --------------------------ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCC
Confidence 01123457999999999987643 678999999999999999999999998
Q ss_pred ChHHHHHHHHhCC--CCCCCCCCCCHHHHHHHHHccccCcCc--cCCChhcHHHHHcCCCCCCCChhhh
Q 001847 905 TRQKTFANILHKD--LKFPSSTPTSLHAKQLMYRLLHRDPKS--RLGSHEGANEIKKHPFFKGVNWALV 969 (1005)
Q Consensus 905 ~~~~~~~~i~~~~--~~~~~~~~~s~~l~~Ll~~~L~~dP~~--Rpt~~~~a~elL~hpff~~~~~~~~ 969 (1005)
+....+..+.... +.++....++..+++|+.+||..++.. |++ +.++++||||+...|...
T Consensus 251 ~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~----~~e~l~hp~~~~~~~~~~ 315 (370)
T cd05621 251 SLVGTYSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNG----VEEIKQHPFFKNDQWNWD 315 (370)
T ss_pred CHHHHHHHHHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCC----HHHHhcCcccCCCCcChH
Confidence 8888888887643 455665567889999999999855543 778 999999999998666533
No 58
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=5.6e-40 Score=370.72 Aligned_cols=271 Identities=35% Similarity=0.683 Sum_probs=232.6
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEEEEE
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
+|++++.||+|+||.||+|.+..+++.||+|++.+..............|..++..+ .|++|+.+++++...+.+|+||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 488999999999999999999999999999999875443344455667788888777 5899999999999999999999
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 831 (1005)
||+++|+|..++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~---- 154 (323)
T cd05616 81 EYVNGGDLMYQIQQV--GRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD---- 154 (323)
T ss_pred cCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCC----
Confidence 999999999998764 45899999999999999999999999999999999999999999999999988532110
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001847 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 911 (1005)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~ 911 (1005)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+.
T Consensus 155 -----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~ 211 (323)
T cd05616 155 -----------------------GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQ 211 (323)
T ss_pred -----------------------CCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHH
Confidence 011224579999999999999999999999999999999999999999988888888
Q ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCCh-hcHHHHHcCCCCCCCChhhhhhcCC
Q 001847 912 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMNP 974 (1005)
Q Consensus 912 ~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~hpff~~~~~~~~~~~~~ 974 (1005)
.+......++. ..+.++.+|+.+||+.+|.+|++.. +...++++||||+.++|..+.....
T Consensus 212 ~i~~~~~~~p~--~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~~~~~~~~~~~ 273 (323)
T cd05616 212 SIMEHNVAYPK--SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEV 273 (323)
T ss_pred HHHhCCCCCCC--cCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCCCHHHHHhCCC
Confidence 88877766654 4688999999999999999999853 3468999999999999998854443
No 59
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-40 Score=372.35 Aligned_cols=259 Identities=33% Similarity=0.559 Sum_probs=235.3
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCeEEE
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCL 749 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~l 749 (1005)
...|.+.+.||.|.||.||+|.++.+|+.+|+|.+.+...........+.+|+.+|+++. ||||+.+++.|+....+++
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l 113 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL 113 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence 468999999999999999999999999999999998876655556788999999999998 9999999999999999999
Q ss_pred EEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecC----CcEEEEeccCCcccC
Q 001847 750 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN----GHVSLTDFDLSCLTS 825 (1005)
Q Consensus 750 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~----g~vkL~DFG~a~~~~ 825 (1005)
|||++.||.|++.+... .+++..+..+++|++.++.|||+.||+||||||+|+|+... +.+|++|||++....
T Consensus 114 vmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~ 190 (382)
T KOG0032|consen 114 VMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIK 190 (382)
T ss_pred EEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEcc
Confidence 99999999999999876 39999999999999999999999999999999999999743 479999999996543
Q ss_pred CCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001847 826 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 905 (1005)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~ 905 (1005)
. .......+||+.|+|||++....++..+||||+|+++|.|++|..||.+.+
T Consensus 191 ~----------------------------~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~ 242 (382)
T KOG0032|consen 191 P----------------------------GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGET 242 (382)
T ss_pred C----------------------------CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCC
Confidence 2 123456799999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhCCCCCC--CCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCC
Q 001847 906 RQKTFANILHKDLKFP--SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 964 (1005)
Q Consensus 906 ~~~~~~~i~~~~~~~~--~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~ 964 (1005)
.......+..+++.+. .+..++..+++||..||..||..|++ +.++|+|||++..
T Consensus 243 ~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~t----a~~~L~HpWi~~~ 299 (382)
T KOG0032|consen 243 EFEIFLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLT----AAQALQHPWIKSI 299 (382)
T ss_pred hhHHHHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCC----HHHHhcCccccCC
Confidence 9999999998877554 45678999999999999999999999 9999999999875
No 60
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=6e-40 Score=371.41 Aligned_cols=265 Identities=38% Similarity=0.751 Sum_probs=222.4
Q ss_pred ccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEEEEEeccCC
Q 001847 678 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 756 (1005)
Q Consensus 678 ~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lV~E~~~g 756 (1005)
+.||+|+||.||+|.+..+++.||+|++++...........+..|..++..+ +||||++++++|...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 4689999999999999999999999999876544555566788899999988 799999999999999999999999999
Q ss_pred CchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 001847 757 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 836 (1005)
Q Consensus 757 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 836 (1005)
++|..++... +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 81 g~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~---------- 148 (329)
T cd05588 81 GDLMFHMQRQ--RKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIR---------- 148 (329)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCcccccccc----------
Confidence 9999888654 4599999999999999999999999999999999999999999999999998843110
Q ss_pred hhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC---------ChH
Q 001847 837 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK---------TRQ 907 (1005)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~---------~~~ 907 (1005)
........+||+.|+|||++.+..++.++|||||||++|+|++|+.||... ...
T Consensus 149 -----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~ 211 (329)
T cd05588 149 -----------------PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTED 211 (329)
T ss_pred -----------------CCCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchH
Confidence 001123457999999999999988999999999999999999999999631 112
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCCh--hcHHHHHcCCCCCCCChhhhhhcC
Q 001847 908 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH--EGANEIKKHPFFKGVNWALVRCMN 973 (1005)
Q Consensus 908 ~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~--~~a~elL~hpff~~~~~~~~~~~~ 973 (1005)
.....+......+|. .++..+.+||.+||..||.+|++.. ..+.++++||||..++|..+...+
T Consensus 212 ~~~~~~~~~~~~~p~--~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~~~~~~~~~~ 277 (329)
T cd05588 212 YLFQVILEKQIRIPR--SLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNIDWDLLEQKQ 277 (329)
T ss_pred HHHHHHHcCCCCCCC--CCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCCCCHHHHHhCC
Confidence 234445555555443 4688899999999999999999843 237899999999999999886543
No 61
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=6.7e-40 Score=368.85 Aligned_cols=265 Identities=41% Similarity=0.804 Sum_probs=223.7
Q ss_pred ccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEEEEEeccCC
Q 001847 678 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 756 (1005)
Q Consensus 678 ~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lV~E~~~g 756 (1005)
+.||+|+||.||+|.+..+++.||+|+++...............|..++..+ +||||+++++++...+.+|+||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4689999999999999999999999999875443444455566677777654 899999999999999999999999999
Q ss_pred CchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 001847 757 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 836 (1005)
Q Consensus 757 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 836 (1005)
++|..++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 g~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~--------- 149 (316)
T cd05592 81 GDLMFHIQSS--GRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNG--------- 149 (316)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCC---------
Confidence 9999998764 45899999999999999999999999999999999999999999999999998532110
Q ss_pred hhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhC
Q 001847 837 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 916 (1005)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~~i~~~ 916 (1005)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.+..+...
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~ 211 (316)
T cd05592 150 ------------------EGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILND 211 (316)
T ss_pred ------------------CCccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC
Confidence 01123457999999999999888999999999999999999999999998887777777665
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCChhhhhhcCCCC
Q 001847 917 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPE 976 (1005)
Q Consensus 917 ~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~~~~~~~~~~~~ 976 (1005)
...++. .++.++.+||.+||..||.+||+. ..++++||||+.++|..+.....+.
T Consensus 212 ~~~~~~--~~~~~~~~ll~~~l~~~P~~R~~~---~~~l~~h~~~~~~~~~~~~~~~~~~ 266 (316)
T cd05592 212 RPHFPR--WISKEAKDCLSKLFERDPTKRLGV---DGDIRQHPFFRGIDWERLEKREIPP 266 (316)
T ss_pred CCCCCC--CCCHHHHHHHHHHccCCHHHcCCC---hHHHHcCcccCCCCHHHHHhCCCCC
Confidence 544443 368889999999999999999982 3588999999999999886544443
No 62
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=9.3e-40 Score=367.72 Aligned_cols=261 Identities=39% Similarity=0.767 Sum_probs=221.2
Q ss_pred ccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEEEEEeccCC
Q 001847 678 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 756 (1005)
Q Consensus 678 ~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lV~E~~~g 756 (1005)
+.||+|+||.||+|.+..++..||+|+++...............|..++..+ +||||+++++++...+++|+||||+.+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 4689999999999999999999999999865432333445666788787755 899999999999999999999999999
Q ss_pred CchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 001847 757 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 836 (1005)
Q Consensus 757 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 836 (1005)
++|..++... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||++......
T Consensus 81 g~L~~~i~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--------- 149 (316)
T cd05620 81 GDLMFHIQDK--GRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFG--------- 149 (316)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccC---------
Confidence 9999998764 45899999999999999999999999999999999999999999999999987431100
Q ss_pred hhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhC
Q 001847 837 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 916 (1005)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~~i~~~ 916 (1005)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.......+...
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~ 211 (316)
T cd05620 150 ------------------DNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVD 211 (316)
T ss_pred ------------------CCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Confidence 01123457999999999999989999999999999999999999999988887777777666
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCChhhhhhc
Q 001847 917 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCM 972 (1005)
Q Consensus 917 ~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~~~~~~~~ 972 (1005)
...++. .++.++.+||.+||..||.+||+. ..++++||||+.++|..+...
T Consensus 212 ~~~~~~--~~~~~~~~li~~~l~~dP~~R~~~---~~~~~~h~~f~~~~~~~~~~~ 262 (316)
T cd05620 212 TPHYPR--WITKESKDILEKLFERDPTRRLGV---VGNIRGHPFFKTINWTALEKR 262 (316)
T ss_pred CCCCCC--CCCHHHHHHHHHHccCCHHHcCCC---hHHHHcCCCcCCCCHHHHHhC
Confidence 555544 368899999999999999999992 358999999999999977443
No 63
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=1.3e-39 Score=367.82 Aligned_cols=270 Identities=36% Similarity=0.690 Sum_probs=231.6
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCeEEEEE
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
+|++.+.||+|+||.||+|.+..+++.||+|++.+...........+..|..++..+. |++|+++++++...+.+|+||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 4788899999999999999999999999999998654434445566778888888885 578889999999999999999
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 831 (1005)
||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 Ey~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~---- 154 (323)
T cd05615 81 EYVNGGDLMYHIQQV--GKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD---- 154 (323)
T ss_pred cCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCC----
Confidence 999999999998764 45999999999999999999999999999999999999999999999999988532110
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001847 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 911 (1005)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~ 911 (1005)
........||+.|+|||++.+..++.++|||||||++|+|++|..||.+........
T Consensus 155 -----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~ 211 (323)
T cd05615 155 -----------------------GVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQ 211 (323)
T ss_pred -----------------------CccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 011223569999999999998889999999999999999999999999988888888
Q ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCCh-hcHHHHHcCCCCCCCChhhhhhcC
Q 001847 912 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMN 973 (1005)
Q Consensus 912 ~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~hpff~~~~~~~~~~~~ 973 (1005)
.+......++. ..+..+.+|+.+||..+|.+|++.. +...++++||||+.++|..+....
T Consensus 212 ~i~~~~~~~p~--~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~~~~~~~~~~ 272 (323)
T cd05615 212 SIMEHNVSYPK--SLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRIDWDKLENRE 272 (323)
T ss_pred HHHhCCCCCCc--cCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCCCHHHHhcCC
Confidence 88877766554 3678899999999999999999854 347899999999999999885543
No 64
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=1.3e-39 Score=366.57 Aligned_cols=261 Identities=38% Similarity=0.769 Sum_probs=221.4
Q ss_pred ccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEEEEEeccCC
Q 001847 678 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 756 (1005)
Q Consensus 678 ~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lV~E~~~g 756 (1005)
+.||+|+||.||+|.+..+++.||+|.++...............|..++..+ +||||+++++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 4689999999999999999999999999865432233445566777787764 999999999999999999999999999
Q ss_pred CchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 001847 757 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 836 (1005)
Q Consensus 757 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 836 (1005)
++|..++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~--------- 149 (316)
T cd05619 81 GDLMFHIQSC--HKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLG--------- 149 (316)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCC---------
Confidence 9999998764 45889999999999999999999999999999999999999999999999988432100
Q ss_pred hhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhC
Q 001847 837 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 916 (1005)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~~i~~~ 916 (1005)
........||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.+..+...
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~ 211 (316)
T cd05619 150 ------------------DAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMD 211 (316)
T ss_pred ------------------CCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Confidence 01112457899999999999888999999999999999999999999988877777777655
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHH-HHHcCCCCCCCChhhhhhcC
Q 001847 917 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGAN-EIKKHPFFKGVNWALVRCMN 973 (1005)
Q Consensus 917 ~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~-elL~hpff~~~~~~~~~~~~ 973 (1005)
...++. ..+..+.+||.+||+.||.+||+ +. ++++||||+.++|..+....
T Consensus 212 ~~~~~~--~~~~~~~~li~~~l~~~P~~R~~----~~~~l~~h~~~~~~~~~~~~~~~ 263 (316)
T cd05619 212 NPCYPR--WLTREAKDILVKLFVREPERRLG----VKGDIRQHPFFREIDWSALEERE 263 (316)
T ss_pred CCCCCc--cCCHHHHHHHHHHhccCHhhcCC----ChHHHHcCcccCCCCHHHHHhCC
Confidence 544443 36788999999999999999999 64 89999999999999885543
No 65
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-42 Score=369.72 Aligned_cols=258 Identities=27% Similarity=0.433 Sum_probs=228.8
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
..|..+..||+|+||.||++.+..+++.||+|++.... .......+.+|+.+|.+++++||.++|+.|..+..++++|
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~--~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiM 90 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEE--AEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIM 90 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhh--cchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHH
Confidence 46888899999999999999999999999999998643 4556788899999999999999999999999999999999
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 831 (1005)
|||.||++.++++.. ..+.+..+..++++++.||.|||..+.+|||||+.|||+..+|.+||+|||++..+..
T Consensus 91 ey~~gGsv~~lL~~~--~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~----- 163 (467)
T KOG0201|consen 91 EYCGGGSVLDLLKSG--NILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTN----- 163 (467)
T ss_pred HHhcCcchhhhhccC--CCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeec-----
Confidence 999999999999763 4458899999999999999999999999999999999999999999999999854321
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001847 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 911 (1005)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~ 911 (1005)
......+++|||.|||||++....|+.++||||||++.|||++|.+||....++..+.
T Consensus 164 ----------------------~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlf 221 (467)
T KOG0201|consen 164 ----------------------TVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLF 221 (467)
T ss_pred ----------------------hhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEE
Confidence 1223367899999999999998899999999999999999999999999888866666
Q ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCC
Q 001847 912 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 965 (1005)
Q Consensus 912 ~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~ 965 (1005)
.|-+..++.... ..+..+++|+..||.+||+.||+ |.+||+|+|++...
T Consensus 222 lIpk~~PP~L~~-~~S~~~kEFV~~CL~k~P~~Rps----A~~LLKh~FIk~a~ 270 (467)
T KOG0201|consen 222 LIPKSAPPRLDG-DFSPPFKEFVEACLDKNPEFRPS----AKELLKHKFIKRAK 270 (467)
T ss_pred eccCCCCCcccc-ccCHHHHHHHHHHhhcCcccCcC----HHHHhhhHHHHhcC
Confidence 665655554444 67888999999999999999999 99999999999844
No 66
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=1.1e-39 Score=375.12 Aligned_cols=268 Identities=36% Similarity=0.660 Sum_probs=226.8
Q ss_pred ccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001847 668 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 747 (1005)
Q Consensus 668 ~i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 747 (1005)
.+..++|++++.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.++||||+++++++...+.+
T Consensus 39 ~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~ 118 (371)
T cd05622 39 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYL 118 (371)
T ss_pred CcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEE
Confidence 34567999999999999999999999999999999998764333344455677899999999999999999999999999
Q ss_pred EEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001847 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (1005)
Q Consensus 748 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 827 (1005)
|+||||+++++|.+++... .+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++......
T Consensus 119 ~lv~Ey~~gg~L~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~ 195 (371)
T cd05622 119 YMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKE 195 (371)
T ss_pred EEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcC
Confidence 9999999999999998653 3889999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCC----CCChhhHHHHHHHHHHHHcCCCCCCC
Q 001847 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG----HTSAVDWWALGILLYEMLYGYTPFRG 903 (1005)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~----~~~~sDIwSlGvll~eLltG~~Pf~~ 903 (1005)
. .......+||+.|+|||++.... ++.++|||||||++|+|++|..||.+
T Consensus 196 ~--------------------------~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~ 249 (371)
T cd05622 196 G--------------------------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 249 (371)
T ss_pred C--------------------------cccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCC
Confidence 0 01123457999999999987543 67899999999999999999999999
Q ss_pred CChHHHHHHHHhCC--CCCCCCCCCCHHHHHHHHHccccCcCc---cCCChhcHHHHHcCCCCCCCChhhh
Q 001847 904 KTRQKTFANILHKD--LKFPSSTPTSLHAKQLMYRLLHRDPKS---RLGSHEGANEIKKHPFFKGVNWALV 969 (1005)
Q Consensus 904 ~~~~~~~~~i~~~~--~~~~~~~~~s~~l~~Ll~~~L~~dP~~---Rpt~~~~a~elL~hpff~~~~~~~~ 969 (1005)
.+....+..+.... +.++....++..+++||.+||. +|.. |++ +.++++|+||++.+|...
T Consensus 250 ~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~-~~~~r~~r~~----~~ei~~h~~~~~~~~~~~ 315 (371)
T cd05622 250 DSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLT-DREVRLGRNG----VEEIKRHLFFKNDQWAWE 315 (371)
T ss_pred CCHHHHHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcC-ChhhhcCCCC----HHHHhcCcccCCCChhHH
Confidence 88888888887643 4556656689999999999998 5555 556 999999999999766533
No 67
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=1.3e-39 Score=359.32 Aligned_cols=267 Identities=32% Similarity=0.565 Sum_probs=221.4
Q ss_pred ccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCCch
Q 001847 680 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 759 (1005)
Q Consensus 680 LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ggsL 759 (1005)
||+|+||.||++.+..+|+.||+|.+................|+++++.++||||+++++++.....+|+||||+.|++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 69999999999999999999999998764333333344556799999999999999999999999999999999999999
Q ss_pred hhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhh
Q 001847 760 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 839 (1005)
Q Consensus 760 ~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~ 839 (1005)
.+++.......++...+..++.||+.||.|||+.||+||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~----------- 149 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK----------- 149 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc-----------
Confidence 988866555568999999999999999999999999999999999999999999999999885432110
Q ss_pred hcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCh----HHHHHHHHh
Q 001847 840 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR----QKTFANILH 915 (1005)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~----~~~~~~i~~ 915 (1005)
......|++.|+|||++.+..++.++|||||||++|+|++|+.||..... .........
T Consensus 150 -----------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~ 212 (277)
T cd05607 150 -----------------TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLE 212 (277)
T ss_pred -----------------eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhc
Confidence 01123689999999999888899999999999999999999999976432 222333333
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCChhhhhhcCCC
Q 001847 916 KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPP 975 (1005)
Q Consensus 916 ~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~~~~~~~~~~~ 975 (1005)
..+... ...++.++.+||.+||+.||++||++.+.+.+++.||||+.++|..++....|
T Consensus 213 ~~~~~~-~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~~~~~~~~~~~~ 271 (277)
T cd05607 213 DEVKFE-HQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTINFPRLEAGLIP 271 (277)
T ss_pred cccccc-cccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCCCHHHHhcCcCC
Confidence 333322 23468899999999999999999998777799999999999999988765444
No 68
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=8.5e-40 Score=369.55 Aligned_cols=264 Identities=42% Similarity=0.740 Sum_probs=225.9
Q ss_pred ccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHH-HHHhCCCCCcceEEEEEEeCCeEEEEEeccCC
Q 001847 678 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAERE-ILDMLDHPFVPALYASFQTKTHVCLITDYCPG 756 (1005)
Q Consensus 678 ~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~-il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~g 756 (1005)
+.||+|+||.||+|.+..+|+.||+|++.+...........+..|.. +++.++||||+++++++...+..|+||||+.+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 46899999999999999999999999997654333344455555654 56778999999999999999999999999999
Q ss_pred CchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 001847 757 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 836 (1005)
Q Consensus 757 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 836 (1005)
++|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++......
T Consensus 81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~--------- 149 (325)
T cd05604 81 GELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ--------- 149 (325)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCC---------
Confidence 9999888754 45899999999999999999999999999999999999999999999999987432100
Q ss_pred hhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhC
Q 001847 837 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 916 (1005)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~~i~~~ 916 (1005)
.......+|++.|+|||++.+..++.++|||||||++|+|++|..||...+..+.+..+...
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~ 211 (325)
T cd05604 150 ------------------SDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHK 211 (325)
T ss_pred ------------------CCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcC
Confidence 01123457999999999999988999999999999999999999999998888888888776
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCChhhhhhc
Q 001847 917 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCM 972 (1005)
Q Consensus 917 ~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~~~~~~~~ 972 (1005)
....+. ..+..+.++|.+||..+|.+||+..+.+.++++||||+.++|..+...
T Consensus 212 ~~~~~~--~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~~~~~~~~~ 265 (325)
T cd05604 212 PLVLRP--GASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESLSWTDLEQK 265 (325)
T ss_pred CccCCC--CCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCCCHHHHHhC
Confidence 554433 468889999999999999999998888899999999999999887543
No 69
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=1.3e-39 Score=366.84 Aligned_cols=263 Identities=40% Similarity=0.766 Sum_probs=225.4
Q ss_pred ccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEEEEEeccCC
Q 001847 678 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 756 (1005)
Q Consensus 678 ~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lV~E~~~g 756 (1005)
+.||+|+||.||+|.+..+++.||+|++++...........+..|+.++..+ +||||+++++++...+.+|+||||+.+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4689999999999999999999999999876444445566777899999888 799999999999999999999999999
Q ss_pred CchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 001847 757 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 836 (1005)
Q Consensus 757 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 836 (1005)
++|..++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--------- 149 (318)
T cd05570 81 GDLMFHIQRS--GRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILG--------- 149 (318)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcC---------
Confidence 9999988764 45999999999999999999999999999999999999999999999999987431100
Q ss_pred hhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhC
Q 001847 837 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 916 (1005)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~~i~~~ 916 (1005)
.......+|++.|+|||++.+..++.++|||||||++|+|++|+.||.+.+.......+...
T Consensus 150 ------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~ 211 (318)
T cd05570 150 ------------------GVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILED 211 (318)
T ss_pred ------------------CCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcC
Confidence 01122356899999999999999999999999999999999999999988887777777776
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCccCCCh-hcHHHHHcCCCCCCCChhhhhh
Q 001847 917 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRC 971 (1005)
Q Consensus 917 ~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~hpff~~~~~~~~~~ 971 (1005)
...++. .++..+.+||.+||..||.+||+.. ..+.++++||||+.++|.....
T Consensus 212 ~~~~~~--~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~~~~~~~~ 265 (318)
T cd05570 212 EVRYPR--WLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREIDWDKLER 265 (318)
T ss_pred CCCCCC--cCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCCCHHHHHh
Confidence 665543 3688999999999999999999921 1129999999999999987643
No 70
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-39 Score=365.99 Aligned_cols=259 Identities=28% Similarity=0.438 Sum_probs=219.9
Q ss_pred cccccCCccccccccccCcEEEEEEEEcCCCeE-EEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 001847 667 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQY-FAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 745 (1005)
Q Consensus 667 ~~i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~-valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 745 (1005)
+.++.....+.+.||.|+||+||++.+ .|.. +|+|++......... ...+.+|+.+|.+++|||||++++++....
T Consensus 36 ~~i~~~~l~~~~~iG~G~~g~V~~~~~--~g~~~vavK~~~~~~~~~~~-~~~f~~E~~il~~l~HpNIV~f~G~~~~~~ 112 (362)
T KOG0192|consen 36 EEIDPDELPIEEVLGSGSFGTVYKGKW--RGTDVVAVKIISDPDFDDES-RKAFRREASLLSRLRHPNIVQFYGACTSPP 112 (362)
T ss_pred eecChHHhhhhhhcccCCceeEEEEEe--CCceeEEEEEecchhcChHH-HHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 445666777788899999999999999 4445 999999876444433 779999999999999999999999999887
Q ss_pred -eEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-cccCCCCCCcEEEecCC-cEEEEeccCCc
Q 001847 746 -HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG-IIYRDLKPENVLLQGNG-HVSLTDFDLSC 822 (1005)
Q Consensus 746 -~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~g-IvHrDLkP~NILi~~~g-~vkL~DFG~a~ 822 (1005)
..+|||||+++|+|.+++.......++...+..|+.||+.||.|||+++ ||||||||+|||++.++ ++||+|||+++
T Consensus 113 ~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr 192 (362)
T KOG0192|consen 113 GSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSR 192 (362)
T ss_pred CceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccce
Confidence 7999999999999999998744567999999999999999999999999 99999999999999998 99999999996
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCccccccccc--CCCCCChhhHHHHHHHHHHHHcCCCC
Q 001847 823 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA--GAGHTSAVDWWALGILLYEMLYGYTP 900 (1005)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~--~~~~~~~sDIwSlGvll~eLltG~~P 900 (1005)
...... .......||+.|||||++. ...++.++||||||+++|||+||+.|
T Consensus 193 ~~~~~~---------------------------~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~P 245 (362)
T KOG0192|consen 193 EKVISK---------------------------TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIP 245 (362)
T ss_pred eecccc---------------------------ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCC
Confidence 543110 1223368999999999999 56899999999999999999999999
Q ss_pred CCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHH
Q 001847 901 FRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 955 (1005)
Q Consensus 901 f~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~el 955 (1005)
|.+.........+.......+....++..+..|+..||..||..||++.+.+..+
T Consensus 246 f~~~~~~~~~~~v~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l 300 (362)
T KOG0192|consen 246 FEDLAPVQVASAVVVGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRL 300 (362)
T ss_pred CCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHH
Confidence 9999887777777655544444444788999999999999999999987654433
No 71
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=1.8e-39 Score=366.50 Aligned_cols=263 Identities=45% Similarity=0.802 Sum_probs=223.3
Q ss_pred cccccccCcEEEEEEEEc---CCCeEEEEEEeeccccc-ChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001847 677 IKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVML-NRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (1005)
Q Consensus 677 ~~~LG~G~~g~Vy~a~~~---~~~~~valK~~~~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 752 (1005)
++.||+|+||.||+|.+. .+++.||+|++...... .......+.+|+.+++.++||||++++++|..++.+|+|||
T Consensus 1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e 80 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILE 80 (323)
T ss_pred CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEe
Confidence 367999999999999874 46889999999764321 22334566789999999999999999999999999999999
Q ss_pred ccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001847 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (1005)
Q Consensus 753 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 832 (1005)
|+.+++|.+++... +.+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||++......
T Consensus 81 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----- 153 (323)
T cd05584 81 YLSGGELFMHLERE--GIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHE----- 153 (323)
T ss_pred CCCCchHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccC-----
Confidence 99999999998764 45889999999999999999999999999999999999999999999999987432110
Q ss_pred CcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001847 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 912 (1005)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~~ 912 (1005)
........|++.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+..
T Consensus 154 ----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~ 211 (323)
T cd05584 154 ----------------------GTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDK 211 (323)
T ss_pred ----------------------CCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence 0112235799999999999888889999999999999999999999999888888888
Q ss_pred HHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCCh-hcHHHHHcCCCCCCCChhhhh
Q 001847 913 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVR 970 (1005)
Q Consensus 913 i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~hpff~~~~~~~~~ 970 (1005)
+..+...++. .++..+.+||.+||..+|++||+.. ..+.++++||||+..+|..+.
T Consensus 212 ~~~~~~~~~~--~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~~~~~~~ 268 (323)
T cd05584 212 ILKGKLNLPP--YLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHVNWDDLL 268 (323)
T ss_pred HHcCCCCCCC--CCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCCCHHHHh
Confidence 8877665554 3678899999999999999999322 229999999999999998774
No 72
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1.8e-39 Score=359.81 Aligned_cols=275 Identities=33% Similarity=0.571 Sum_probs=225.4
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 752 (1005)
.|++.+.||+|+||.||++.+..+++.||+|.+.............+.+|+.+++.++||||+.+++++...+.+|+|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 48899999999999999999998999999999876543333344566789999999999999999999999999999999
Q ss_pred ccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001847 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (1005)
Q Consensus 753 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 832 (1005)
|+.+++|.+++.......+++..+..++.|++.||.|||++||+|+||||+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~---- 156 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE---- 156 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCC----
Confidence 9999999988865544569999999999999999999999999999999999999999999999999885432110
Q ss_pred CcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001847 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 912 (1005)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~~ 912 (1005)
......|++.|+|||++.+..++.++|||||||++|+|++|..||.+.........
T Consensus 157 ------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~ 212 (285)
T cd05605 157 ------------------------TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREE 212 (285)
T ss_pred ------------------------ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHH
Confidence 01234689999999999888889999999999999999999999987655433222
Q ss_pred HHhC--CCCCCCCCCCCHHHHHHHHHccccCcCccCCCh-hcHHHHHcCCCCCCCChhhhhhcCCC
Q 001847 913 ILHK--DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMNPP 975 (1005)
Q Consensus 913 i~~~--~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~hpff~~~~~~~~~~~~~~ 975 (1005)
+... .........++..+.+||.+||..||.+||+.. +.+.++++||||...+|..+.....+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 278 (285)
T cd05605 213 VERRVKEDQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTANFKRLEAGMLE 278 (285)
T ss_pred HHHHhhhcccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCCCHHHHhhCCCC
Confidence 2211 111112234688899999999999999999322 12899999999999999988554443
No 73
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.9e-39 Score=367.01 Aligned_cols=274 Identities=37% Similarity=0.690 Sum_probs=226.1
Q ss_pred ccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEEEEEeccCC
Q 001847 678 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 756 (1005)
Q Consensus 678 ~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lV~E~~~g 756 (1005)
+.||+|+||.||+|.+..+++.||+|++++...........+.+|+.++.++ +||+|+.+++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 4689999999999999999999999999876544455567788899999888 699999999999999999999999999
Q ss_pred CchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 001847 757 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 836 (1005)
Q Consensus 757 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 836 (1005)
++|..++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~~L~~~~~~~--~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~--------- 149 (327)
T cd05617 81 GDLMFHMQRQ--RKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGP--------- 149 (327)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCC---------
Confidence 9999988764 45999999999999999999999999999999999999999999999999988432100
Q ss_pred hhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC-------ChHHH
Q 001847 837 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK-------TRQKT 909 (1005)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~-------~~~~~ 909 (1005)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||... .....
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~ 211 (327)
T cd05617 150 ------------------GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYL 211 (327)
T ss_pred ------------------CCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHH
Confidence 01123457999999999999989999999999999999999999999532 12233
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCCh--hcHHHHHcCCCCCCCChhhhhhcCCCCCCCCCC
Q 001847 910 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH--EGANEIKKHPFFKGVNWALVRCMNPPELDAPLF 982 (1005)
Q Consensus 910 ~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~--~~a~elL~hpff~~~~~~~~~~~~~~~~~~p~~ 982 (1005)
...+......++. ..+..+.++|.+||..||.+|++.. ..+.++++||||+.++|..+.....+....|..
T Consensus 212 ~~~~~~~~~~~p~--~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~~~~~~~~~~~~~~~~~~~ 284 (327)
T cd05617 212 FQVILEKPIRIPR--FLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSIDWDLLEKKQVTPPFKPQI 284 (327)
T ss_pred HHHHHhCCCCCCC--CCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCCCHHHHHhCCCCCCccCCC
Confidence 3444444444443 4678899999999999999999843 236799999999999999986655444334443
No 74
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=1.6e-39 Score=367.94 Aligned_cols=264 Identities=38% Similarity=0.741 Sum_probs=220.8
Q ss_pred ccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEEEEEeccCC
Q 001847 678 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 756 (1005)
Q Consensus 678 ~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lV~E~~~g 756 (1005)
+.||+|+||.||+|.+..+++.||+|++.+...........+..|+.++.++ +||||+++++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 4689999999999999999999999999876555555666778899888877 899999999999999999999999999
Q ss_pred CchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 001847 757 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 836 (1005)
Q Consensus 757 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 836 (1005)
++|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~~L~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~--------- 149 (329)
T cd05618 81 GDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP--------- 149 (329)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCC---------
Confidence 9999888664 45999999999999999999999999999999999999999999999999988432100
Q ss_pred hhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCC---------CChH
Q 001847 837 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG---------KTRQ 907 (1005)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~---------~~~~ 907 (1005)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.. ....
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~ 211 (329)
T cd05618 150 ------------------GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTED 211 (329)
T ss_pred ------------------CCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHH
Confidence 0112345799999999999998899999999999999999999999952 1112
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCCh--hcHHHHHcCCCCCCCChhhhhhc
Q 001847 908 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH--EGANEIKKHPFFKGVNWALVRCM 972 (1005)
Q Consensus 908 ~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~--~~a~elL~hpff~~~~~~~~~~~ 972 (1005)
.....+......+|. ..+..+.+||.+||..||.+||+.. ..+.++++||||+.++|..+...
T Consensus 212 ~~~~~i~~~~~~~p~--~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~~~~~~~~~ 276 (329)
T cd05618 212 YLFQVILEKQIRIPR--SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDLMEQK 276 (329)
T ss_pred HHHHHHhcCCCCCCC--CCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCCCHHHHHcC
Confidence 234445555555543 4678899999999999999999843 23689999999999999877543
No 75
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=2.1e-39 Score=358.44 Aligned_cols=267 Identities=33% Similarity=0.598 Sum_probs=219.3
Q ss_pred ccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCCch
Q 001847 680 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 759 (1005)
Q Consensus 680 LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ggsL 759 (1005)
||+|+||+||++.+..+++.||+|.+.............+..|+.+++.++|+||++++++|...+.+|+||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 69999999999999999999999998765443444456677899999999999999999999999999999999999999
Q ss_pred hhHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchh
Q 001847 760 FLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 837 (1005)
Q Consensus 760 ~~~l~~--~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~ 837 (1005)
..++.. .....+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~--------- 151 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQ--------- 151 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCC---------
Confidence 887743 223468999999999999999999999999999999999999999999999999885432110
Q ss_pred hhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH----HHHHHH
Q 001847 838 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ----KTFANI 913 (1005)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~----~~~~~i 913 (1005)
.......|++.|+|||++.+..++.++|||||||++|+|++|+.||...... .....+
T Consensus 152 ------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 213 (280)
T cd05608 152 ------------------SKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRI 213 (280)
T ss_pred ------------------ccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhh
Confidence 0112346899999999999999999999999999999999999999765432 222233
Q ss_pred HhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChh-cHHHHHcCCCCCCCChhhhhhcCCC
Q 001847 914 LHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANEIKKHPFFKGVNWALVRCMNPP 975 (1005)
Q Consensus 914 ~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~-~a~elL~hpff~~~~~~~~~~~~~~ 975 (1005)
......++ ..++..+.+|+.+||+.||++||++.+ .++++++||||+.++|..+.....|
T Consensus 214 ~~~~~~~~--~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~~~~~ 274 (280)
T cd05608 214 LNDSVTYP--DKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDLNWRQLEAGMLP 274 (280)
T ss_pred cccCCCCc--ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcCCHhHHhhccCC
Confidence 33322222 347889999999999999999996543 4999999999999999987543333
No 76
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=1.7e-39 Score=367.02 Aligned_cols=263 Identities=40% Similarity=0.711 Sum_probs=223.7
Q ss_pred ccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHH-HHHHhCCCCCcceEEEEEEeCCeEEEEEeccCC
Q 001847 678 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAER-EILDMLDHPFVPALYASFQTKTHVCLITDYCPG 756 (1005)
Q Consensus 678 ~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~-~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~g 756 (1005)
+.||+|+||.||+|.+..+++.||+|++.+...........+..|. .+++.++||||+++++++...+.+|+||||+.+
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 4689999999999999999999999999764332223333444444 456788999999999999999999999999999
Q ss_pred CchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 001847 757 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 836 (1005)
Q Consensus 757 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 836 (1005)
++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~~L~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~--------- 149 (325)
T cd05602 81 GELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH--------- 149 (325)
T ss_pred CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccC---------
Confidence 9999998764 45889999999999999999999999999999999999999999999999998432110
Q ss_pred hhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhC
Q 001847 837 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 916 (1005)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~~i~~~ 916 (1005)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.+..+...
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~ 211 (325)
T cd05602 150 ------------------NGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK 211 (325)
T ss_pred ------------------CCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhC
Confidence 01123457999999999999988999999999999999999999999988888887777766
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCChhhhhh
Q 001847 917 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRC 971 (1005)
Q Consensus 917 ~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~~~~~~~ 971 (1005)
...++ ..++..+.+||.+||+.+|.+|++..+.+.++++|+||..++|..+..
T Consensus 212 ~~~~~--~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~~~~~~~~ 264 (325)
T cd05602 212 PLQLK--PNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPINWDDLIN 264 (325)
T ss_pred CcCCC--CCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCCCHHHHHh
Confidence 55443 347889999999999999999999888889999999999999998743
No 77
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=7.2e-40 Score=370.99 Aligned_cols=263 Identities=41% Similarity=0.744 Sum_probs=223.7
Q ss_pred ccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC---CCCCcceEEEEEEeCCeEEEEEeccCC
Q 001847 680 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML---DHPFVPALYASFQTKTHVCLITDYCPG 756 (1005)
Q Consensus 680 LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l---~hpnIv~l~~~~~~~~~~~lV~E~~~g 756 (1005)
||+|+||.||+|.+..+++.||+|++.+..............|..++..+ +||||+.++++|...+.+|+||||+.+
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 69999999999999999999999999765433334445556677777665 699999999999999999999999999
Q ss_pred CchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 001847 757 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 836 (1005)
Q Consensus 757 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 836 (1005)
++|..++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.++|+|||++......
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~--------- 149 (330)
T cd05586 81 GELFWHLQKE--GRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTD--------- 149 (330)
T ss_pred ChHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCC---------
Confidence 9999988764 45899999999999999999999999999999999999999999999999988432110
Q ss_pred hhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHh
Q 001847 837 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILH 915 (1005)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~~i~~ 915 (1005)
.......+||+.|+|||++.+. .++.++|||||||++|+|++|..||.+.+..+.+..+..
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~ 211 (330)
T cd05586 150 ------------------NKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAF 211 (330)
T ss_pred ------------------CCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHc
Confidence 0112345799999999998764 478899999999999999999999999888888888877
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCChhhhhhc
Q 001847 916 KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCM 972 (1005)
Q Consensus 916 ~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~~~~~~~~ 972 (1005)
+...++.. .++..+.+||.+||..||.+||+..+.+.++++||||+..+|..+...
T Consensus 212 ~~~~~~~~-~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~~~~~~~~~ 267 (330)
T cd05586 212 GKVRFPKN-VLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADIDWDLLSKK 267 (330)
T ss_pred CCCCCCCc-cCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCCCHHHHHhC
Confidence 76666543 367889999999999999999987777999999999999999987543
No 78
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=3.1e-39 Score=365.91 Aligned_cols=273 Identities=38% Similarity=0.678 Sum_probs=227.4
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
++|++++.||+|+||.||++.+..+++.||+|++.+...........+.+|+.++..++|+||+.++++|...+.+|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 47999999999999999999999999999999997644434445566788999999999999999999999999999999
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 831 (1005)
||+.+++|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++........
T Consensus 81 e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-- 157 (331)
T cd05597 81 DYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGT-- 157 (331)
T ss_pred ecCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCC--
Confidence 999999999999753 24589999999999999999999999999999999999999999999999998854321100
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-----CCCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001847 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLYGYTPFRGKTR 906 (1005)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-----~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~ 906 (1005)
.......||+.|+|||++.. ..++.++|||||||++|+|++|+.||.+...
T Consensus 158 ------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~ 213 (331)
T cd05597 158 ------------------------VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL 213 (331)
T ss_pred ------------------------ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCH
Confidence 01122469999999999863 3467799999999999999999999998887
Q ss_pred HHHHHHHHhCC--CCCCCC-CCCCHHHHHHHHHccccCcCc--cCCChhcHHHHHcCCCCCCCChhhhhhcCCC
Q 001847 907 QKTFANILHKD--LKFPSS-TPTSLHAKQLMYRLLHRDPKS--RLGSHEGANEIKKHPFFKGVNWALVRCMNPP 975 (1005)
Q Consensus 907 ~~~~~~i~~~~--~~~~~~-~~~s~~l~~Ll~~~L~~dP~~--Rpt~~~~a~elL~hpff~~~~~~~~~~~~~~ 975 (1005)
.+.+..+.... ..++.. ..++..+.+||.+||+.++.. |++ +.++++||||+.++|..+....+|
T Consensus 214 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~----~~~~l~hp~~~~~~~~~~~~~~~~ 283 (331)
T cd05597 214 VETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNG----LQDFKDHPFFEGIDWDNIRNSTAP 283 (331)
T ss_pred HHHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccCcccccCCCC----HHHHhcCCCCCCCCHHHHhhCCCC
Confidence 77777776543 222222 346889999999999764433 667 999999999999999998776665
No 79
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=2.3e-39 Score=365.37 Aligned_cols=262 Identities=43% Similarity=0.760 Sum_probs=223.5
Q ss_pred ccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHH-HHHhCCCCCcceEEEEEEeCCeEEEEEeccCC
Q 001847 678 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAERE-ILDMLDHPFVPALYASFQTKTHVCLITDYCPG 756 (1005)
Q Consensus 678 ~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~-il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~g 756 (1005)
+.||+|+||.||+|.+..+++.||+|++.+...........+..|.. +++.++||||+++++++...+.+|+||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46899999999999999999999999997654333333445555554 67889999999999999999999999999999
Q ss_pred CchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 001847 757 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 836 (1005)
Q Consensus 757 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 836 (1005)
++|...+... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++......
T Consensus 81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~--------- 149 (321)
T cd05603 81 GELFFHLQRE--RCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEP--------- 149 (321)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCC---------
Confidence 9999888654 45899999999999999999999999999999999999999999999999987432100
Q ss_pred hhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhC
Q 001847 837 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 916 (1005)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~~i~~~ 916 (1005)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....+..+...
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~ 211 (321)
T cd05603 150 ------------------EETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHK 211 (321)
T ss_pred ------------------CCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcC
Confidence 01123457999999999998888999999999999999999999999998887777777776
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCChhhhh
Q 001847 917 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVR 970 (1005)
Q Consensus 917 ~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~~~~~~ 970 (1005)
...++. ..+..+.++|.+||+.+|.+|++....+.++++|+||..++|..+.
T Consensus 212 ~~~~~~--~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (321)
T cd05603 212 PLQLPG--GKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPINWDDLY 263 (321)
T ss_pred CCCCCC--CCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCCCHHHHh
Confidence 655543 4678899999999999999999977778899999999999999774
No 80
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=5.2e-40 Score=373.60 Aligned_cols=254 Identities=29% Similarity=0.495 Sum_probs=220.4
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-C-----CCcceEEEEEEeCCe
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-H-----PFVPALYASFQTKTH 746 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~-h-----pnIv~l~~~~~~~~~ 746 (1005)
+|.+++.||+|+||+|-+|.+.+|++.||||+++.. +....+...|+.+|..|+ | -|||+++++|...++
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~----k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~H 262 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK----KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNH 262 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC----hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccc
Confidence 899999999999999999999999999999999854 556677788999999996 4 389999999999999
Q ss_pred EEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecC--CcEEEEeccCCccc
Q 001847 747 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN--GHVSLTDFDLSCLT 824 (1005)
Q Consensus 747 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~--g~vkL~DFG~a~~~ 824 (1005)
+|||+|.+ ..+|+++++.+....++...++.++.||+.||.+||+.||||+||||+|||+.+- ..|||+|||.|+..
T Consensus 263 lciVfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~ 341 (586)
T KOG0667|consen 263 LCIVFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFE 341 (586)
T ss_pred eeeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEeccccccc
Confidence 99999999 8999999998888889999999999999999999999999999999999999854 37999999999764
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001847 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 904 (1005)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~ 904 (1005)
.. ...+++.+..|+|||++.+.+|+.+.||||||||++||++|.+.|.|.
T Consensus 342 ~q------------------------------~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ 391 (586)
T KOG0667|consen 342 SQ------------------------------RVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGD 391 (586)
T ss_pred CC------------------------------cceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCC
Confidence 31 112567899999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHhC--------------------C--------------------------------CCCC-CC-------C
Q 001847 905 TRQKTFANILHK--------------------D--------------------------------LKFP-SS-------T 924 (1005)
Q Consensus 905 ~~~~~~~~i~~~--------------------~--------------------------------~~~~-~~-------~ 924 (1005)
+..+++..|+.- . ...| .. .
T Consensus 392 ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~ 471 (586)
T KOG0667|consen 392 NEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLP 471 (586)
T ss_pred CHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcc
Confidence 988888877540 0 0001 00 0
Q ss_pred -CCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCC
Q 001847 925 -PTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 965 (1005)
Q Consensus 925 -~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~ 965 (1005)
.....+.+||.+||.+||.+|+| ..++|+||||+...
T Consensus 472 ~~~~~~F~dflk~~L~~dP~~R~t----p~qal~Hpfl~~~~ 509 (586)
T KOG0667|consen 472 KADDKLFIDFLKRCLEWDPAERIT----PAQALNHPFLTGTS 509 (586)
T ss_pred cccHHHHHHHHHHHhccCchhcCC----HHHHhcCccccccc
Confidence 12235789999999999999999 99999999999643
No 81
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.4e-39 Score=347.53 Aligned_cols=262 Identities=27% Similarity=0.454 Sum_probs=221.9
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCC-cceEEEEEEeCC----
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPF-VPALYASFQTKT---- 745 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpn-Iv~l~~~~~~~~---- 745 (1005)
...|..+++||+|+||+||+|.++.+|+.||+|.++..... ........+|+.+++.|+|+| |+.+++++...+
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~-EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~ 88 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE-EGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRG 88 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc-cCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccc
Confidence 45789999999999999999999999999999999865321 223445678999999999999 999999998877
Q ss_pred --eEEEEEeccCCCchhhHHhhCCC--CCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCC
Q 001847 746 --HVCLITDYCPGGELFLLLDRQPT--KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 821 (1005)
Q Consensus 746 --~~~lV~E~~~ggsL~~~l~~~~~--~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a 821 (1005)
.+++||||+ .-+|..++..... ..++...++.+++||+.||+|||++||+||||||.||||+++|.+||+|||+|
T Consensus 89 ~~~l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlA 167 (323)
T KOG0594|consen 89 IGKLYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLA 167 (323)
T ss_pred cceEEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchH
Confidence 899999999 8899999987542 35788999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCC
Q 001847 822 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTP 900 (1005)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlGvll~eLltG~~P 900 (1005)
+.... +.......++|.+|+|||++.+. .|+...||||+||+++||++++..
T Consensus 168 ra~~i---------------------------p~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~L 220 (323)
T KOG0594|consen 168 RAFSI---------------------------PMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPL 220 (323)
T ss_pred HHhcC---------------------------CcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCC
Confidence 64331 22334566899999999999887 688899999999999999999999
Q ss_pred CCCCChHHHHHHHHhC--C---CC-------------CCCC----------CCCCHHHHHHHHHccccCcCccCCChhcH
Q 001847 901 FRGKTRQKTFANILHK--D---LK-------------FPSS----------TPTSLHAKQLMYRLLHRDPKSRLGSHEGA 952 (1005)
Q Consensus 901 f~~~~~~~~~~~i~~~--~---~~-------------~~~~----------~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a 952 (1005)
|.|.+..+++..|.+- . .. ++.. +..+....+++.+||+.+|.+|.+ +
T Consensus 221 FpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~S----a 296 (323)
T KOG0594|consen 221 FPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRIS----A 296 (323)
T ss_pred CCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcC----H
Confidence 9999998888888651 1 11 1111 112347789999999999999999 9
Q ss_pred HHHHcCCCCCCCC
Q 001847 953 NEIKKHPFFKGVN 965 (1005)
Q Consensus 953 ~elL~hpff~~~~ 965 (1005)
+.+|.||||....
T Consensus 297 ~~al~h~yf~~~~ 309 (323)
T KOG0594|consen 297 KGALTHPYFSELP 309 (323)
T ss_pred HHHhcChhhcccc
Confidence 9999999999863
No 82
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=2.7e-39 Score=358.42 Aligned_cols=257 Identities=26% Similarity=0.383 Sum_probs=211.5
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
++|++.+.||+|+||.||+|.+..+++.||+|.+..... .......+.+|+.+++.++||||+++++++...+.+|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEE-NEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVF 79 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccc-cccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEE
Confidence 479999999999999999999999999999999876422 2334566788999999999999999999999999999999
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 831 (1005)
||+.++.+..+... ...+++..++.++.||+.||.|||+.||+||||||+||+++.++.+||+|||++........
T Consensus 80 e~~~~~~l~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-- 155 (287)
T cd07848 80 EYVEKNMLELLEEM--PNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSN-- 155 (287)
T ss_pred ecCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCccccccccc--
Confidence 99988776655433 24589999999999999999999999999999999999999999999999999855321100
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001847 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 911 (1005)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~ 911 (1005)
.......|++.|+|||++.+..++.++|||||||++|+|++|+.||.+.+......
T Consensus 156 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~ 211 (287)
T cd07848 156 ------------------------ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLF 211 (287)
T ss_pred ------------------------ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 01123468999999999988889999999999999999999999998876554443
Q ss_pred HHHhCC-------------------CCCCCC-----------CCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCC
Q 001847 912 NILHKD-------------------LKFPSS-----------TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 961 (1005)
Q Consensus 912 ~i~~~~-------------------~~~~~~-----------~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff 961 (1005)
.+.... ..++.. ..++..+.+||.+||++||++||| ++++|+||||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s----~~~~l~hp~f 287 (287)
T cd07848 212 TIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYL----TEQCLNHPAF 287 (287)
T ss_pred HHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCC----HHHHhcCCCC
Confidence 332210 011110 125678999999999999999999 9999999998
No 83
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=4e-39 Score=365.18 Aligned_cols=271 Identities=44% Similarity=0.782 Sum_probs=220.6
Q ss_pred CccccccccccCcEEEEEEEEc---CCCeEEEEEEeeccccc-ChHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeE
Q 001847 673 HFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVML-NRNKVHRACAEREILDML-DHPFVPALYASFQTKTHV 747 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~---~~~~~valK~~~~~~~~-~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~ 747 (1005)
+|++++.||+|+||.||+|.+. .+++.||+|++.+.... .......+..|+.+++.+ +|++|+.+++++...+.+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 4899999999999999999874 46899999999764322 223445677899999999 599999999999999999
Q ss_pred EEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001847 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (1005)
Q Consensus 748 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 827 (1005)
|+||||+.+++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++......
T Consensus 81 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~ 158 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQR--DNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSE 158 (332)
T ss_pred EEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCcccccc
Confidence 9999999999999998764 45899999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCC--
Q 001847 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGK-- 904 (1005)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlGvll~eLltG~~Pf~~~-- 904 (1005)
. .......+||+.|+|||++.+. .++.++|||||||++|+|++|..||...
T Consensus 159 ~--------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~ 212 (332)
T cd05614 159 E--------------------------KERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGE 212 (332)
T ss_pred C--------------------------CCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCC
Confidence 0 0112245799999999998765 4788999999999999999999999643
Q ss_pred --ChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCCh-hcHHHHHcCCCCCCCChhhhhhcC
Q 001847 905 --TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMN 973 (1005)
Q Consensus 905 --~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~hpff~~~~~~~~~~~~ 973 (1005)
........+......++ ..++..+.+||.+||..||++||+.. +.++++++||||+..+|..+....
T Consensus 213 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~~~ 282 (332)
T cd05614 213 RNTQSEVSRRILKCDPPFP--SFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGLDWEALALRK 282 (332)
T ss_pred CCCHHHHHHHHhcCCCCCC--CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCCCHHHHHhCC
Confidence 22333344444444333 34688999999999999999999532 238999999999999998875433
No 84
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=3.4e-39 Score=358.25 Aligned_cols=256 Identities=25% Similarity=0.410 Sum_probs=212.1
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 750 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 750 (1005)
+++|++++.||.|+||.||++.+..++..||+|.++... .......+.+|+.+++.++||||+++++++...+..|+|
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 81 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEH--EEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLV 81 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccc--cCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEE
Confidence 568999999999999999999999999999999987542 122234567899999999999999999999999999999
Q ss_pred EeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001847 751 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (1005)
Q Consensus 751 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 830 (1005)
|||+. ++|.+++... ...++...++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 82 ~e~~~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~--- 156 (288)
T cd07871 82 FEYLD-SDLKQYLDNC-GNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVP--- 156 (288)
T ss_pred EeCCC-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCC---
Confidence 99995 5899888654 245889999999999999999999999999999999999999999999999988542210
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001847 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 909 (1005)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~ 909 (1005)
........|++.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.
T Consensus 157 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~ 212 (288)
T cd07871 157 ------------------------TKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEE 212 (288)
T ss_pred ------------------------CccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 011123468999999999865 4678899999999999999999999988877666
Q ss_pred HHHHHhCC-------------------CCCCC---------CCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCC
Q 001847 910 FANILHKD-------------------LKFPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 961 (1005)
Q Consensus 910 ~~~i~~~~-------------------~~~~~---------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff 961 (1005)
+..+.... ..++. ....+.++++||.+||++||.+||| ++++|+||||
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t----~~~~l~hp~f 288 (288)
T cd07871 213 LHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRIS----AEAALRHSYF 288 (288)
T ss_pred HHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCC----HHHHhcCCCC
Confidence 55543310 00111 1235778999999999999999999 9999999998
No 85
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-40 Score=355.67 Aligned_cols=261 Identities=31% Similarity=0.497 Sum_probs=233.8
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
+-|.+.+.||+|-|.+|.+|++.-+|..||||++.+..+.+ .....+++|...|+.++|||||++|+++.....+|||+
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~-~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiL 96 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDT-LSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLIL 96 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccch-hhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEE
Confidence 56999999999999999999999999999999999875543 44567888999999999999999999999999999999
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEe-cCCcEEEEeccCCcccCCCCCC
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ-GNGHVSLTDFDLSCLTSCKPQL 830 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~-~~g~vkL~DFG~a~~~~~~~~~ 830 (1005)
|+-.+|+|++|+.++.. .++++..++|+.||+.|+.|+|+..+|||||||+||.|- .-|-|||.|||++..+.
T Consensus 97 ELGD~GDl~DyImKHe~-Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~----- 170 (864)
T KOG4717|consen 97 ELGDGGDLFDYIMKHEE-GLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQ----- 170 (864)
T ss_pred EecCCchHHHHHHhhhc-cccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCC-----
Confidence 99999999999987644 499999999999999999999999999999999998765 56999999999984322
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCC-ChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001847 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHT-SAVDWWALGILLYEMLYGYTPFRGKTRQKT 909 (1005)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~-~~sDIwSlGvll~eLltG~~Pf~~~~~~~~ 909 (1005)
|...-.+.||+..|-|||+|.+..|+ +++|||||||+||-|++|++||...+..+.
T Consensus 171 -----------------------PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSET 227 (864)
T KOG4717|consen 171 -----------------------PGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSET 227 (864)
T ss_pred -----------------------CcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhh
Confidence 12234567999999999999998886 589999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCChhh
Q 001847 910 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWAL 968 (1005)
Q Consensus 910 ~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~~~~ 968 (1005)
+..|+......|.. .+.++++||..||..||.+|.+ +++|..|+|++..+-.+
T Consensus 228 LTmImDCKYtvPsh--vS~eCrdLI~sMLvRdPkkRAs----lEeI~s~~Wlq~~D~~~ 280 (864)
T KOG4717|consen 228 LTMIMDCKYTVPSH--VSKECRDLIQSMLVRDPKKRAS----LEEIVSTSWLQAGDRGL 280 (864)
T ss_pred hhhhhcccccCchh--hhHHHHHHHHHHHhcCchhhcc----HHHHhccccccCCCCCc
Confidence 99999988777765 7899999999999999999999 99999999999876443
No 86
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=4.2e-39 Score=365.04 Aligned_cols=275 Identities=36% Similarity=0.643 Sum_probs=228.9
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
++|++++.||+|+||.||++.+..+++.||+|++.+...........+..|+.++..++|++|+.+++++...+.+|+||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 37999999999999999999999999999999987543333444456778999999999999999999999999999999
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 831 (1005)
||+.+|+|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 81 ey~~~g~L~~~l~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~--- 156 (332)
T cd05623 81 DYYVGGDLLTLLSKFE-DRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG--- 156 (332)
T ss_pred eccCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCC---
Confidence 9999999999997632 358999999999999999999999999999999999999999999999999884321110
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-----CCCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001847 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLYGYTPFRGKTR 906 (1005)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-----~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~ 906 (1005)
.......+||+.|+|||++.. ..++.++|||||||++|+|++|+.||.+.+.
T Consensus 157 -----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~ 213 (332)
T cd05623 157 -----------------------TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESL 213 (332)
T ss_pred -----------------------cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCH
Confidence 011123479999999999863 4578899999999999999999999999888
Q ss_pred HHHHHHHHhCCC--CCCCC-CCCCHHHHHHHHHccccCcCc--cCCChhcHHHHHcCCCCCCCChhhhhhcCCCCC
Q 001847 907 QKTFANILHKDL--KFPSS-TPTSLHAKQLMYRLLHRDPKS--RLGSHEGANEIKKHPFFKGVNWALVRCMNPPEL 977 (1005)
Q Consensus 907 ~~~~~~i~~~~~--~~~~~-~~~s~~l~~Ll~~~L~~dP~~--Rpt~~~~a~elL~hpff~~~~~~~~~~~~~~~~ 977 (1005)
.+.+..+..... .++.. ..++..+.+||.+||+.++.. |++ +.++++||||.+++|..+.....|..
T Consensus 214 ~~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~----~~~~~~h~~f~~~~~~~~~~~~~~~~ 285 (332)
T cd05623 214 VETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNG----IEDFKQHPFFTGIDWDNIRNCEAPYI 285 (332)
T ss_pred HHHHHHHhCCCccccCCCccccCCHHHHHHHHHHccChhhhcCCCC----HHHHhCCCCcCCCCHHHHhhCCCCcc
Confidence 888887776532 23322 346889999999999765544 567 99999999999999999976665544
No 87
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4e-40 Score=366.55 Aligned_cols=262 Identities=25% Similarity=0.451 Sum_probs=236.7
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe-EEE
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH-VCL 749 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~-~~l 749 (1005)
++.|.+++.+|.|+||.++++.++..++.||+|.+.-.....+.. ....+|..+++++.|||||.+.+.|..++. +||
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r-~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~I 81 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPER-RSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCI 81 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhh-HHHHHHHHHHHhccCCCeeeeccchhcCCceEEE
Confidence 568999999999999999999999999999999998765444433 467889999999999999999999998887 999
Q ss_pred EEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 001847 750 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 829 (1005)
Q Consensus 750 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~ 829 (1005)
||+||+||+|.+.+.++.+..++++.+..|+.||+.||.|||+++|.|||||+.|||++.++.|||+|||+|+.+..+.
T Consensus 82 vm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~- 160 (426)
T KOG0589|consen 82 VMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED- 160 (426)
T ss_pred EEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCch-
Confidence 9999999999999998877889999999999999999999999999999999999999999999999999998765321
Q ss_pred CCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001847 830 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 909 (1005)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~ 909 (1005)
....+++|||.|++||.+.+.+|+.++|||||||++|||++-+.+|.+.+-...
T Consensus 161 --------------------------~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~L 214 (426)
T KOG0589|consen 161 --------------------------SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSEL 214 (426)
T ss_pred --------------------------hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHH
Confidence 134578999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCC
Q 001847 910 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 965 (1005)
Q Consensus 910 ~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~ 965 (1005)
+.+|.... -.|....++.++..+|..||+.+|..||+ +.+||.+|.+...-
T Consensus 215 i~ki~~~~-~~Plp~~ys~el~~lv~~~l~~~P~~RPs----a~~LL~~P~l~~~~ 265 (426)
T KOG0589|consen 215 ILKINRGL-YSPLPSMYSSELRSLVKSMLRKNPEHRPS----ALELLRRPHLLRYL 265 (426)
T ss_pred HHHHhhcc-CCCCCccccHHHHHHHHHHhhcCCccCCC----HHHHhhChhhhhHH
Confidence 99998876 33444557899999999999999999999 99999999888543
No 88
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=4.1e-39 Score=360.19 Aligned_cols=261 Identities=25% Similarity=0.414 Sum_probs=210.0
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 750 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 750 (1005)
.++|++++.||+|+||.||+|.+..+++.||+|++..... ......+.+|+.+++.++||||+++++++......|+|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 81 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEE--EGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLV 81 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccc--cccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEE
Confidence 3689999999999999999999999999999999875421 22234567899999999999999999999999999999
Q ss_pred EeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001847 751 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (1005)
Q Consensus 751 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 830 (1005)
|||+ +++|.+++... ...++...++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 82 ~e~~-~~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--- 156 (303)
T cd07869 82 FEYV-HTDLCQYMDKH-PGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVP--- 156 (303)
T ss_pred EECC-CcCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCC---
Confidence 9999 57888877654 245889999999999999999999999999999999999999999999999988532211
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCCh-HH
Q 001847 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTR-QK 908 (1005)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~-~~ 908 (1005)
........|++.|+|||++.+ ..++.++|||||||++|+|++|..||.+... ..
T Consensus 157 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~ 212 (303)
T cd07869 157 ------------------------SHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQD 212 (303)
T ss_pred ------------------------CccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHH
Confidence 011123468999999999865 4578899999999999999999999987543 23
Q ss_pred HHHHHHhC--CC---CCC-------------------------CCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcC
Q 001847 909 TFANILHK--DL---KFP-------------------------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 958 (1005)
Q Consensus 909 ~~~~i~~~--~~---~~~-------------------------~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~h 958 (1005)
.+..+... .. .++ .....+..+.+||.+||+.||.+||| +.++|+|
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s----~~~~l~h 288 (303)
T cd07869 213 QLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLS----AQAALSH 288 (303)
T ss_pred HHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccC----HHHHhcC
Confidence 33332210 00 000 00113457889999999999999999 9999999
Q ss_pred CCCCCCCh
Q 001847 959 PFFKGVNW 966 (1005)
Q Consensus 959 pff~~~~~ 966 (1005)
|||+.+++
T Consensus 289 ~~f~~~~~ 296 (303)
T cd07869 289 EYFSDLPP 296 (303)
T ss_pred cccccCCh
Confidence 99998754
No 89
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=3.6e-39 Score=365.32 Aligned_cols=277 Identities=37% Similarity=0.659 Sum_probs=229.8
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
++|++++.||+|+||.||++.+..+++.||+|++.+...........+.+|+.++..++|++|+.+++++...+..|+||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 47999999999999999999999999999999987643333444556778999999999999999999999999999999
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 831 (1005)
||+.||+|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++........
T Consensus 81 Ey~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~-- 157 (331)
T cd05624 81 DYYVGGDLLTLLSKFE-DRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGT-- 157 (331)
T ss_pred eCCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCc--
Confidence 9999999999997632 4589999999999999999999999999999999999999999999999999854321100
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-----CCCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001847 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLYGYTPFRGKTR 906 (1005)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-----~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~ 906 (1005)
......+|++.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+.
T Consensus 158 ------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~ 213 (331)
T cd05624 158 ------------------------VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESL 213 (331)
T ss_pred ------------------------eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCH
Confidence 01123569999999999865 4567899999999999999999999998888
Q ss_pred HHHHHHHHhCC--CCCCCC-CCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCChhhhhhcCCCCC
Q 001847 907 QKTFANILHKD--LKFPSS-TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPEL 977 (1005)
Q Consensus 907 ~~~~~~i~~~~--~~~~~~-~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~~~~~~~~~~~~~ 977 (1005)
.+.+..+.... ++++.. ..++..+.+||.+||+.++ +|+. ...++++++||||+.++|..++...+|..
T Consensus 214 ~~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~-~~~~-~~~~~~~~~h~~f~~~~~~~~~~~~~~~~ 285 (331)
T cd05624 214 VETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRE-RRLG-QNGIEDFKKHAFFEGIDWENIRNLEAPYI 285 (331)
T ss_pred HHHHHHHHcCCCcccCCCccccCCHHHHHHHHHHccCch-hhcC-CCCHHHHhcCCCcCCCCHHHHhhCCCCcc
Confidence 77777776643 333332 3468899999999999765 4432 12399999999999999999987776644
No 90
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=2.3e-39 Score=364.82 Aligned_cols=264 Identities=43% Similarity=0.774 Sum_probs=226.0
Q ss_pred cccccccCcEEEEEEEE---cCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEec
Q 001847 677 IKPLGSGDTGSVHLVEL---CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 753 (1005)
Q Consensus 677 ~~~LG~G~~g~Vy~a~~---~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~ 753 (1005)
++.||+|+||.||++.+ ..+|+.||+|++..... .......+..|+.++++++||||+++++++...+.+|+||||
T Consensus 1 l~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 79 (318)
T cd05582 1 LKVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATL-KVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDF 79 (318)
T ss_pred CceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcC
Confidence 36799999999999987 35789999999986432 222345667899999999999999999999999999999999
Q ss_pred cCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCC
Q 001847 754 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 833 (1005)
Q Consensus 754 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~ 833 (1005)
+.+++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 80 ~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~------ 151 (318)
T cd05582 80 LRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH------ 151 (318)
T ss_pred CCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCC------
Confidence 9999999998764 45899999999999999999999999999999999999999999999999988543211
Q ss_pred cchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHH
Q 001847 834 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI 913 (1005)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~~i 913 (1005)
........|++.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+..+
T Consensus 152 ---------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i 210 (318)
T cd05582 152 ---------------------EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMI 210 (318)
T ss_pred ---------------------CCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHH
Confidence 01122457999999999998888899999999999999999999999998888888888
Q ss_pred HhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChh-cHHHHHcCCCCCCCChhhhhhc
Q 001847 914 LHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANEIKKHPFFKGVNWALVRCM 972 (1005)
Q Consensus 914 ~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~-~a~elL~hpff~~~~~~~~~~~ 972 (1005)
......++. .++..+.+||.+||+.||.+||++.+ .+.++++||||+.++|..+...
T Consensus 211 ~~~~~~~p~--~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (318)
T cd05582 211 LKAKLGMPQ--FLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTIDWNKLYRR 268 (318)
T ss_pred HcCCCCCCC--CCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCCCHHHHHhc
Confidence 776665553 36888999999999999999999654 4789999999999999987543
No 91
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.4e-38 Score=360.69 Aligned_cols=262 Identities=24% Similarity=0.389 Sum_probs=218.5
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 001847 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 748 (1005)
Q Consensus 669 i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 748 (1005)
+..++|++++.||+|+||.||++.+..++..+|+|.+.... .......+.+|+++++.++||||+++++++...+.++
T Consensus 2 l~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 79 (331)
T cd06649 2 LKDDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS 79 (331)
T ss_pred CCcccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEE
Confidence 44679999999999999999999999999999999987542 3344567889999999999999999999999999999
Q ss_pred EEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHc-CcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001847 749 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (1005)
Q Consensus 749 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~-gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 827 (1005)
+||||+++++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++.....
T Consensus 80 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~- 156 (331)
T cd06649 80 ICMEHMDGGSLDQVLKEA--KRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID- 156 (331)
T ss_pred EEeecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccccccc-
Confidence 999999999999999764 3489999999999999999999986 699999999999999999999999998843211
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001847 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 907 (1005)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~ 907 (1005)
.......|++.|+|||++.+..++.++|||||||++|+|++|+.||......
T Consensus 157 ----------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~ 208 (331)
T cd06649 157 ----------------------------SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAK 208 (331)
T ss_pred ----------------------------cccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 0112346899999999999888999999999999999999999999765543
Q ss_pred HHHHHHH----------------------------------------------hCCCCCCCCCCCCHHHHHHHHHccccC
Q 001847 908 KTFANIL----------------------------------------------HKDLKFPSSTPTSLHAKQLMYRLLHRD 941 (1005)
Q Consensus 908 ~~~~~i~----------------------------------------------~~~~~~~~~~~~s~~l~~Ll~~~L~~d 941 (1005)
+....+. ....+......++.++++||.+||.+|
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~ 288 (331)
T cd06649 209 ELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKN 288 (331)
T ss_pred HHHHHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCC
Confidence 3322111 111111111235778999999999999
Q ss_pred cCccCCChhcHHHHHcCCCCCCCChh
Q 001847 942 PKSRLGSHEGANEIKKHPFFKGVNWA 967 (1005)
Q Consensus 942 P~~Rpt~~~~a~elL~hpff~~~~~~ 967 (1005)
|++||| +.++++||||+.....
T Consensus 289 P~~Rpt----~~ell~h~~~~~~~~~ 310 (331)
T cd06649 289 PAERAD----LKMLMNHTFIKRSEVE 310 (331)
T ss_pred cccCCC----HHHHhcChHHhhcccc
Confidence 999999 9999999999875443
No 92
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.6e-40 Score=351.97 Aligned_cols=273 Identities=36% Similarity=0.640 Sum_probs=239.4
Q ss_pred cccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 001847 667 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 746 (1005)
Q Consensus 667 ~~i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 746 (1005)
+++..+.|+.-++||.|+||.||-|.-+.||+.||+|.+.+..+..+.......+|..||.++++++||.+-..|...+.
T Consensus 180 qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~ 259 (591)
T KOG0986|consen 180 QPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDA 259 (591)
T ss_pred hhccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCc
Confidence 56778899999999999999999999999999999999987766666666777899999999999999999999999999
Q ss_pred EEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 001847 747 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 826 (1005)
Q Consensus 747 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~ 826 (1005)
+|+||..|+||+|.-.+-......+++..++.++.+|+.||.+||+.+||.|||||+|||+|+.|+|+|+|+|+|..+..
T Consensus 260 LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~ 339 (591)
T KOG0986|consen 260 LCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPE 339 (591)
T ss_pred eEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCC
Confidence 99999999999998877766556799999999999999999999999999999999999999999999999999976532
Q ss_pred CCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001847 827 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 906 (1005)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~ 906 (1005)
. ......+||.+|||||++.+..|+...|-|||||+||+|+.|+.||.....
T Consensus 340 g----------------------------~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~Ke 391 (591)
T KOG0986|consen 340 G----------------------------KPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKE 391 (591)
T ss_pred C----------------------------CccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhh
Confidence 1 122344899999999999999999999999999999999999999976433
Q ss_pred H----HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCCh-hcHHHHHcCCCCCCCChhhh
Q 001847 907 Q----KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALV 969 (1005)
Q Consensus 907 ~----~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~hpff~~~~~~~~ 969 (1005)
. ++-..++.....++ ...|.++++|...+|++||.+|+..+ +.+.++.+||||+.++|..+
T Consensus 392 Kvk~eEvdrr~~~~~~ey~--~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw~rl 457 (591)
T KOG0986|consen 392 KVKREEVDRRTLEDPEEYS--DKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNWRRL 457 (591)
T ss_pred hhhHHHHHHHHhcchhhcc--cccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCCHhHH
Confidence 2 33333444444555 45799999999999999999999987 77999999999999999988
No 93
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-40 Score=359.97 Aligned_cols=296 Identities=37% Similarity=0.623 Sum_probs=260.9
Q ss_pred ccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001847 668 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 747 (1005)
Q Consensus 668 ~i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 747 (1005)
++.+.+++++..||-|+||.|-+|........+|+|++++..+.+....+.+..|..||..+++|+||++|-.|.+..++
T Consensus 416 ~v~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyv 495 (732)
T KOG0614|consen 416 QVKLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYV 495 (732)
T ss_pred ccchhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhh
Confidence 34567889999999999999999998666667999999988777888888899999999999999999999999999999
Q ss_pred EEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001847 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (1005)
Q Consensus 748 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 827 (1005)
|++||-|-||.|+..++.+ +.+.+...+.++..+++|++|||++|||+|||||+|+|++.+|.+||.|||+|+....
T Consensus 496 YmLmEaClGGElWTiLrdR--g~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~- 572 (732)
T KOG0614|consen 496 YMLMEACLGGELWTILRDR--GSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGS- 572 (732)
T ss_pred hhhHHhhcCchhhhhhhhc--CCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhcc-
Confidence 9999999999999999875 5699999999999999999999999999999999999999999999999999976542
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001847 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 907 (1005)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~ 907 (1005)
.....++||||.|.|||++....++.++|.||||+++|||++|.+||.+.+++
T Consensus 573 ---------------------------g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpm 625 (732)
T KOG0614|consen 573 ---------------------------GRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPM 625 (732)
T ss_pred ---------------------------CCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchH
Confidence 23356789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCC-hhcHHHHHcCCCCCCCChhhhhhcCCCCCCCCCCCCcc
Q 001847 908 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGS-HEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATDT 986 (1005)
Q Consensus 908 ~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~-~~~a~elL~hpff~~~~~~~~~~~~~~~~~~p~~~~~~ 986 (1005)
..+..|+++--.+.-+..+...+.+||++++..+|.+|+.+ ...+.+|.+|.||.+++|.-++...-|..-+|.++-++
T Consensus 626 ktYn~ILkGid~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdweglr~~~L~pPi~~~va~pt 705 (732)
T KOG0614|consen 626 KTYNLILKGIDKIEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDWEGLRSRTLPPPIIPSVANPT 705 (732)
T ss_pred HHHHHHHhhhhhhhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCChhhhhhccCCCCccccCCCcc
Confidence 99999998743333334578889999999999999999985 35699999999999999998855544444468888887
Q ss_pred ccccccC
Q 001847 987 EKEYKVV 993 (1005)
Q Consensus 987 ~~~~~~~ 993 (1005)
+..|+-.
T Consensus 706 D~s~Fd~ 712 (732)
T KOG0614|consen 706 DVSNFDN 712 (732)
T ss_pred cchhccC
Confidence 7777643
No 94
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=5.4e-38 Score=348.86 Aligned_cols=268 Identities=44% Similarity=0.803 Sum_probs=233.2
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
++|++.+.||.|++|.||++.+..+++.+|+|.+.............+.+|++++++++||||+++++++...+.+|+||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 37999999999999999999999999999999997654444555677889999999999999999999999999999999
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 831 (1005)
||+++++|.+++... ..++...+..++.||+.||.|||++|++|+||+|+||+++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~---- 154 (290)
T cd05580 81 EYVPGGELFSHLRKS--GRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR---- 154 (290)
T ss_pred ecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC----
Confidence 999999999999765 45899999999999999999999999999999999999999999999999988543211
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001847 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 911 (1005)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~ 911 (1005)
.....|++.|+|||.+.+...+.++||||||+++|+|++|..||..........
T Consensus 155 --------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~ 208 (290)
T cd05580 155 --------------------------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYE 208 (290)
T ss_pred --------------------------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 123468899999999988888889999999999999999999998887777777
Q ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCCh-hcHHHHHcCCCCCCCChhhhhhcC
Q 001847 912 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMN 973 (1005)
Q Consensus 912 ~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~hpff~~~~~~~~~~~~ 973 (1005)
.+..+...++.. .+..+.++|.+||..+|.+|++.. +.++++++||||+.++|..+....
T Consensus 209 ~~~~~~~~~~~~--~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 269 (290)
T cd05580 209 KILEGKVRFPSF--FSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGIDWIALLQRK 269 (290)
T ss_pred HHhcCCccCCcc--CCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccCCHHHHhhcc
Confidence 777666555543 578899999999999999999332 349999999999999999885433
No 95
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.4e-39 Score=358.94 Aligned_cols=321 Identities=37% Similarity=0.635 Sum_probs=256.3
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 001847 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 748 (1005)
Q Consensus 669 i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 748 (1005)
++..-|..++.||-|+||.|.+|.-..|...||+|.+++..+..+.....+..|..||..-+++-||++|..|.+.+.+|
T Consensus 626 MdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLY 705 (1034)
T KOG0608|consen 626 MDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLY 705 (1034)
T ss_pred ccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceE
Confidence 45567999999999999999999999999999999999887778888888889999999999999999999999999999
Q ss_pred EEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccC-CC
Q 001847 749 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS-CK 827 (1005)
Q Consensus 749 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~-~~ 827 (1005)
+||+|++||++-.+|-+. +.++++++++++..|.+|++++|+.|+|||||||+|||||.+|++||.|||++.-+. ..
T Consensus 706 FVMdYIPGGDmMSLLIrm--gIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTH 783 (1034)
T KOG0608|consen 706 FVMDYIPGGDMMSLLIRM--GIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 783 (1034)
T ss_pred EEEeccCCccHHHHHHHh--ccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceecc
Confidence 999999999999998775 569999999999999999999999999999999999999999999999999974321 11
Q ss_pred CCCCCCcchhhhhcccCCCCCcccc-c--------------ccccccccccCCcccccccccCCCCCChhhHHHHHHHHH
Q 001847 828 PQLLLPTTNEKKRRHKGQQNPVFMA-E--------------PMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLY 892 (1005)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~-~--------------~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~ 892 (1005)
...++.. ++..+.........+.. . ..-....++||+.|+|||++....++.-+|-||.||+||
T Consensus 784 dskYYq~-gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~ 862 (1034)
T KOG0608|consen 784 DSKYYQE-GDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILY 862 (1034)
T ss_pred ccccccC-CCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHH
Confidence 1222221 11111110000000000 0 001234578999999999999999999999999999999
Q ss_pred HHHcCCCCCCCCChHHHHHHHHh--CCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCChhhhh
Q 001847 893 EMLYGYTPFRGKTRQKTFANILH--KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVR 970 (1005)
Q Consensus 893 eLltG~~Pf~~~~~~~~~~~i~~--~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~~~~~~ 970 (1005)
+|+.|++||...+..+...+++. ..+.++....++.++.+||.++++ +++.|+. +..+.++..||||++++|..+|
T Consensus 863 em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc~-sad~RLG-kng~d~vKaHpfFkgIDfsslR 940 (1034)
T KOG0608|consen 863 EMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLCC-SADSRLG-KNGADQVKAHPFFKGIDFSSLR 940 (1034)
T ss_pred HHhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHhc-Chhhhhc-ccchhhhhcCccccccchHhhh
Confidence 99999999998888777666654 345666677789999999998776 7899998 5568899999999999999999
Q ss_pred hcCCCCCCCCCCCCccccccccCCc
Q 001847 971 CMNPPELDAPLFATDTEKEYKVVDP 995 (1005)
Q Consensus 971 ~~~~~~~~~p~~~~~~~~~~~~~~~ 995 (1005)
....|=++.=.--||+.+ +..+|+
T Consensus 941 kq~ApYIP~ItHptDTSN-Fdpvdp 964 (1034)
T KOG0608|consen 941 KQRAPYIPRITHPTDTSN-FDPVDP 964 (1034)
T ss_pred hccCCcCccccCCCcccc-CCcCCc
Confidence 888775533233344443 444444
No 96
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=1.6e-38 Score=360.75 Aligned_cols=264 Identities=25% Similarity=0.396 Sum_probs=211.1
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC-----CeE
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK-----THV 747 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~-----~~~ 747 (1005)
+|++.+.||+|+||.||+|.+..++..||+|.+.... ........+.+|+.+++.++||||+++++++... ..+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 79 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVF-EHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDI 79 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhh-ccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceE
Confidence 5899999999999999999999999999999987532 2233445788999999999999999999987543 358
Q ss_pred EEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001847 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (1005)
Q Consensus 748 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 827 (1005)
|+||||+ +++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 80 ~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~ 156 (338)
T cd07859 80 YVVFELM-ESDLHQVIKAN--DDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 156 (338)
T ss_pred EEEEecC-CCCHHHHHHhc--ccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccc
Confidence 9999999 67899888764 35899999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC--CCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001847 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYTPFRGKT 905 (1005)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~~sDIwSlGvll~eLltG~~Pf~~~~ 905 (1005)
.. .........|++.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+
T Consensus 157 ~~------------------------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~ 212 (338)
T cd07859 157 TP------------------------TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN 212 (338)
T ss_pred cC------------------------ccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCC
Confidence 00 0011133579999999999865 567889999999999999999999998765
Q ss_pred hHHHHHHHHh--------------------------CCCCCC---CCCCCCHHHHHHHHHccccCcCccCCChhcHHHHH
Q 001847 906 RQKTFANILH--------------------------KDLKFP---SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 956 (1005)
Q Consensus 906 ~~~~~~~i~~--------------------------~~~~~~---~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL 956 (1005)
.......+.. ...+.+ .....+..+.+||.+||+.||++||+ +.++|
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~e~l 288 (338)
T cd07859 213 VVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPT----AEEAL 288 (338)
T ss_pred hHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCC----HHHHh
Confidence 4333221110 000000 11235678899999999999999999 99999
Q ss_pred cCCCCCCCChhh
Q 001847 957 KHPFFKGVNWAL 968 (1005)
Q Consensus 957 ~hpff~~~~~~~ 968 (1005)
+||||+.+....
T Consensus 289 ~hp~f~~~~~~~ 300 (338)
T cd07859 289 ADPYFKGLAKVE 300 (338)
T ss_pred cCchhhhcCccc
Confidence 999999876643
No 97
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=5e-38 Score=348.32 Aligned_cols=273 Identities=34% Similarity=0.577 Sum_probs=226.1
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 752 (1005)
.|+..+.||.|+||.||++.+..+++.||+|.+.............+.+|+.+++.++|+||+.+++++..++..|+|||
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEE
Confidence 47788999999999999999999999999999876544333444567789999999999999999999999999999999
Q ss_pred ccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001847 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (1005)
Q Consensus 753 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 832 (1005)
|+.+++|.+++.......+++..+..++.|++.||.|||+.||+||||||+||++++++.++|+|||++......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~----- 155 (285)
T cd05632 81 IMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEG----- 155 (285)
T ss_pred eccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCC-----
Confidence 999999998886544456999999999999999999999999999999999999999999999999988543211
Q ss_pred CcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001847 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 912 (1005)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~~ 912 (1005)
.......|++.|+|||++.+..++.++|+|||||++|+|++|..||.+.........
T Consensus 156 -----------------------~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~ 212 (285)
T cd05632 156 -----------------------ESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREE 212 (285)
T ss_pred -----------------------CcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 011234689999999999888899999999999999999999999987665443333
Q ss_pred HHhCC--CCCCCCCCCCHHHHHHHHHccccCcCccCCChhc-HHHHHcCCCCCCCChhhhhhcC
Q 001847 913 ILHKD--LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG-ANEIKKHPFFKGVNWALVRCMN 973 (1005)
Q Consensus 913 i~~~~--~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~-a~elL~hpff~~~~~~~~~~~~ 973 (1005)
+.... .........+..+.+|+.+||..||.+||+..+. +.+++.|+||+..+|..+...+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 276 (285)
T cd05632 213 VDRRVLETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMNFKRLEAGM 276 (285)
T ss_pred HHHhhhccccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcCCHHHHhcCc
Confidence 32211 1111223467789999999999999999997643 8899999999999999874433
No 98
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-40 Score=362.12 Aligned_cols=260 Identities=27% Similarity=0.435 Sum_probs=226.3
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
+.|.++..||.|+||.||+|.++.++...|-|++.- .......++.-||+||..|+||+||++++.|...+.++|+.
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIet---kseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwili 108 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIET---KSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILI 108 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcc---cchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEE
Confidence 468889999999999999999999998889998753 34567788889999999999999999999999999999999
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 831 (1005)
|||.||-+..++-.- +..|++.++.-+++|++.||.|||+++|||||||..|||++-+|.++|.|||++....
T Consensus 109 EFC~GGAVDaimlEL-~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~------ 181 (1187)
T KOG0579|consen 109 EFCGGGAVDAIMLEL-GRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNK------ 181 (1187)
T ss_pred eecCCchHhHHHHHh-ccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccch------
Confidence 999988887776543 4569999999999999999999999999999999999999999999999999884321
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCccccccccc-----CCCCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001847 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 906 (1005)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~-----~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~ 906 (1005)
......+++.|||+|||||+.. ..+|++++||||||++|.+|.-+.+|-...+.
T Consensus 182 ---------------------~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnp 240 (1187)
T KOG0579|consen 182 ---------------------STRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNP 240 (1187)
T ss_pred ---------------------hHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccch
Confidence 0112346789999999999874 35789999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCC-CCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCCh
Q 001847 907 QKTFANILHKDLKFP-SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 966 (1005)
Q Consensus 907 ~~~~~~i~~~~~~~~-~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~~ 966 (1005)
+..+-+|.+..++.. .+..-+..+.+||.+||.+||..||+ +.+||+||||++++-
T Consensus 241 MRVllKiaKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~----aaqll~Hpfv~~~~S 297 (1187)
T KOG0579|consen 241 MRVLLKIAKSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPP----AAQLLKHPFVQNAPS 297 (1187)
T ss_pred HHHHHHHhhcCCCcccCcchhhhHHHHHHHHHHhcCCccCCC----HHHHhhCcccccCCc
Confidence 999988887765432 33345678999999999999999999 999999999997653
No 99
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.8e-39 Score=345.51 Aligned_cols=256 Identities=27% Similarity=0.468 Sum_probs=213.2
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC--C---e
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--T---H 746 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~--~---~ 746 (1005)
-.|...+.+|+|+||.||++....++..+|||.+-.+. . ---+|+.+|+.++|||||++.-+|... . +
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~----r---~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~ 96 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK----R---YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVY 96 (364)
T ss_pred EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCC----C---cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhH
Confidence 36899999999999999999999999999999876441 1 223599999999999999999888632 2 4
Q ss_pred EEEEEeccCCCchhhHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecC-CcEEEEeccCCcc
Q 001847 747 VCLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDLSCL 823 (1005)
Q Consensus 747 ~~lV~E~~~ggsL~~~l~~--~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~-g~vkL~DFG~a~~ 823 (1005)
..+||||| .-+|..+++. ..+..++.-.++.++.||++||+|||+.||+||||||.|+|+|.+ |.+||||||.|+.
T Consensus 97 lnlVleym-P~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~ 175 (364)
T KOG0658|consen 97 LNLVLEYM-PETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKV 175 (364)
T ss_pred HHHHHHhc-hHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCccee
Confidence 56899999 7799988873 123558889999999999999999999999999999999999966 9999999999976
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCC
Q 001847 824 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFR 902 (1005)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlGvll~eLltG~~Pf~ 902 (1005)
.... ....++..|..|+|||.+.+. .|+.+.||||.||++.||+-|++.|.
T Consensus 176 L~~~----------------------------epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFp 227 (364)
T KOG0658|consen 176 LVKG----------------------------EPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFP 227 (364)
T ss_pred eccC----------------------------CCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccC
Confidence 5421 233567899999999999885 68889999999999999999999999
Q ss_pred CCChHHHHHHHHhC-----------------CCCCC----------CCCCCCHHHHHHHHHccccCcCccCCChhcHHHH
Q 001847 903 GKTRQKTFANILHK-----------------DLKFP----------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 955 (1005)
Q Consensus 903 ~~~~~~~~~~i~~~-----------------~~~~~----------~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~el 955 (1005)
|.+...++..|.+- ...++ .....++++.+|+.++|.++|.+|.+ +.++
T Consensus 228 G~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~----~~~~ 303 (364)
T KOG0658|consen 228 GDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLS----ALEA 303 (364)
T ss_pred CCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCC----HHHH
Confidence 99888887777541 11111 11335778999999999999999999 9999
Q ss_pred HcCCCCCCCChh
Q 001847 956 KKHPFFKGVNWA 967 (1005)
Q Consensus 956 L~hpff~~~~~~ 967 (1005)
+.||||..+--.
T Consensus 304 l~h~fFdelr~~ 315 (364)
T KOG0658|consen 304 LAHPFFDELRDP 315 (364)
T ss_pred hcchhhHHhhCc
Confidence 999999975333
No 100
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=4.5e-38 Score=348.69 Aligned_cols=270 Identities=35% Similarity=0.617 Sum_probs=223.1
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 752 (1005)
.|+..+.||.|+||.||++.+..+++.||+|.+.............+.+|+.++++++|++|+.+++.+...+.+|+|||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 47888999999999999999999999999999876544344444567789999999999999999999999999999999
Q ss_pred ccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001847 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (1005)
Q Consensus 753 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 832 (1005)
|+.+++|.+++.......+++..+..++.|++.||.|||+.||+|+||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~---- 156 (285)
T cd05630 81 LMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ---- 156 (285)
T ss_pred ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc----
Confidence 9999999998865544568999999999999999999999999999999999999999999999999884422110
Q ss_pred CcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH---HH
Q 001847 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ---KT 909 (1005)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~---~~ 909 (1005)
......|++.|+|||++.+..++.++|||||||++|+|++|+.||.+.... ..
T Consensus 157 ------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~ 212 (285)
T cd05630 157 ------------------------TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREE 212 (285)
T ss_pred ------------------------cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHH
Confidence 112346899999999999888999999999999999999999999865432 22
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCCh-hcHHHHHcCCCCCCCChhhhhh
Q 001847 910 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRC 971 (1005)
Q Consensus 910 ~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~hpff~~~~~~~~~~ 971 (1005)
...+... ........++..+.+|+.+||+.||.+||+.. ..+.++++||||+.++|..++.
T Consensus 213 ~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~~~~~~~~ 274 (285)
T cd05630 213 VERLVKE-VQEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQINFKRLEA 274 (285)
T ss_pred HHhhhhh-hhhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhccCHHHHhc
Confidence 2222221 11112234678899999999999999999843 1378999999999999998865
No 101
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=3.4e-38 Score=350.16 Aligned_cols=256 Identities=26% Similarity=0.440 Sum_probs=208.6
Q ss_pred CCccccccccccCcEEEEEEEEcC-CCeEEEEEEeecccccChHHHHHHHHHHHHHHhC---CCCCcceEEEEEE-----
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCG-SGQYFAMKAMDKGVMLNRNKVHRACAEREILDML---DHPFVPALYASFQ----- 742 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~-~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l---~hpnIv~l~~~~~----- 742 (1005)
++|++++.||+|+||.||+|.+.. +++.+|+|.++..... ........+|+.+++.+ +||||+++++++.
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~ 79 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE-EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 79 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCC-CCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCC
Confidence 379999999999999999999854 4788999998754322 22233455677777665 6999999999885
Q ss_pred eCCeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCc
Q 001847 743 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 822 (1005)
Q Consensus 743 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~ 822 (1005)
....+++||||+ +++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus 80 ~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~ 158 (290)
T cd07862 80 RETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR 158 (290)
T ss_pred CCCcEEEEEccC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceE
Confidence 345689999999 5689999876555568999999999999999999999999999999999999999999999999985
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCC
Q 001847 823 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 902 (1005)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~ 902 (1005)
..... .......|++.|+|||++.+..++.++|||||||++|+|++|++||.
T Consensus 159 ~~~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~ 210 (290)
T cd07862 159 IYSFQ----------------------------MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFR 210 (290)
T ss_pred eccCC----------------------------cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcC
Confidence 43211 11234568999999999988889999999999999999999999999
Q ss_pred CCChHHHHHHHHhCCC-----CCCC--------------------CCCCCHHHHHHHHHccccCcCccCCChhcHHHHHc
Q 001847 903 GKTRQKTFANILHKDL-----KFPS--------------------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 957 (1005)
Q Consensus 903 ~~~~~~~~~~i~~~~~-----~~~~--------------------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 957 (1005)
+....+.+..+..... .++. ....+..+.+||.+||+.||++||+ +.++|+
T Consensus 211 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s----~~~~l~ 286 (290)
T cd07862 211 GSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRIS----AYSALS 286 (290)
T ss_pred CCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCC----HHHHhc
Confidence 8887777766654210 0000 1235677899999999999999999 999999
Q ss_pred CCCC
Q 001847 958 HPFF 961 (1005)
Q Consensus 958 hpff 961 (1005)
||||
T Consensus 287 hp~f 290 (290)
T cd07862 287 HPYF 290 (290)
T ss_pred CCCC
Confidence 9998
No 102
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=1.6e-37 Score=347.78 Aligned_cols=302 Identities=38% Similarity=0.678 Sum_probs=243.1
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
++|++++.||+|+||.||++.+..+++.|++|.+.............+.+|+.+++.++||||+++++.+...+.+|+||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 36999999999999999999999999999999987654434455667889999999999999999999999999999999
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 831 (1005)
||+.|++|.+++... +.+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++..........
T Consensus 81 e~~~g~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~ 158 (305)
T cd05609 81 EYVEGGDCATLLKNI--GALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTN 158 (305)
T ss_pred ecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCcccc
Confidence 999999999999764 458999999999999999999999999999999999999999999999999885422111100
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001847 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 911 (1005)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~ 911 (1005)
.... . ..............|+..|+|||.+....++.++|||||||++|+|++|..||.+....+...
T Consensus 159 ~~~~---------~---~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~ 226 (305)
T cd05609 159 LYEG---------H---IEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFG 226 (305)
T ss_pred cccc---------c---cccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 0000 0 000000011123467889999999988888999999999999999999999999888877777
Q ss_pred HHHhCCCCCCCCC-CCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCChhhhhhcCCCCCCCCCCCCcccccc
Q 001847 912 NILHKDLKFPSST-PTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATDTEKEY 990 (1005)
Q Consensus 912 ~i~~~~~~~~~~~-~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 990 (1005)
.+.......+... ..+..+.+||.+||..+|++||++. .+.++|+||||...+|+.......+ -+|.+..-.+..|
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~-~~~~ll~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 303 (305)
T cd05609 227 QVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTG-GAFEVKQHRFFLGLDWNGLLRQKAE--FIPQLESEDDTSY 303 (305)
T ss_pred HHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCcc-CHHHHHhCccccCCCHHHHhhcCCC--CCCCCCCcccccc
Confidence 7776655554432 4688899999999999999999853 3789999999999999997654333 3466655555554
No 103
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.3e-38 Score=364.60 Aligned_cols=254 Identities=24% Similarity=0.365 Sum_probs=206.8
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 001847 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 748 (1005)
Q Consensus 669 i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 748 (1005)
+...+|++++.||+|+||.||+|.+..+++.||+|.... ..+.+|+.++++++||||++++++|......|
T Consensus 89 ~~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~---------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ 159 (391)
T PHA03212 89 IEKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR---------GGTATEAHILRAINHPSIIQLKGTFTYNKFTC 159 (391)
T ss_pred cccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh---------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeE
Confidence 445789999999999999999999999999999996432 34678999999999999999999999999999
Q ss_pred EEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 001847 749 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 828 (1005)
Q Consensus 749 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~ 828 (1005)
+|||++ +++|..++... ..++...++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 160 lv~e~~-~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~ 236 (391)
T PHA03212 160 LILPRY-KTDLYCYLAAK--RNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN 236 (391)
T ss_pred EEEecC-CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCccccccccc
Confidence 999999 67888888654 348999999999999999999999999999999999999999999999999985421100
Q ss_pred CCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC---
Q 001847 829 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT--- 905 (1005)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~--- 905 (1005)
........||+.|+|||++.+..++.++|||||||++|+|++|..||.+..
T Consensus 237 --------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~ 290 (391)
T PHA03212 237 --------------------------ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLD 290 (391)
T ss_pred --------------------------ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCccccc
Confidence 011224579999999999998889999999999999999999998875422
Q ss_pred ----hHHHHHHHHhC--------------------------CCCCCC-------CCCCCHHHHHHHHHccccCcCccCCC
Q 001847 906 ----RQKTFANILHK--------------------------DLKFPS-------STPTSLHAKQLMYRLLHRDPKSRLGS 948 (1005)
Q Consensus 906 ----~~~~~~~i~~~--------------------------~~~~~~-------~~~~s~~l~~Ll~~~L~~dP~~Rpt~ 948 (1005)
....+..+... ....+. ....+.++.+||.+||++||.+|||
T Consensus 291 ~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpt- 369 (391)
T PHA03212 291 GDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPS- 369 (391)
T ss_pred ccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCC-
Confidence 11111111110 000000 0123557889999999999999999
Q ss_pred hhcHHHHHcCCCCCCC
Q 001847 949 HEGANEIKKHPFFKGV 964 (1005)
Q Consensus 949 ~~~a~elL~hpff~~~ 964 (1005)
+.++|+||||+.+
T Consensus 370 ---a~elL~hp~f~~~ 382 (391)
T PHA03212 370 ---AEALLDFAAFQDI 382 (391)
T ss_pred ---HHHHhcChhhccC
Confidence 9999999999874
No 104
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=7.6e-38 Score=357.83 Aligned_cols=256 Identities=27% Similarity=0.418 Sum_probs=208.7
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 001847 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 748 (1005)
Q Consensus 669 i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 748 (1005)
....+|+.++.||.|+||.||++.+..+++.||||++.... .......+.+|+.+++.++|+||+++++++...+.+|
T Consensus 71 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 148 (353)
T PLN00034 71 KSLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH--EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQ 148 (353)
T ss_pred CCHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC--cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEE
Confidence 44678999999999999999999999999999999986542 3344567889999999999999999999999999999
Q ss_pred EEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 001847 749 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 828 (1005)
Q Consensus 749 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~ 828 (1005)
+||||+.+++|.... ..++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 149 lv~e~~~~~~L~~~~------~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~- 221 (353)
T PLN00034 149 VLLEFMDGGSLEGTH------IADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQT- 221 (353)
T ss_pred EEEecCCCCcccccc------cCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceecccc-
Confidence 999999999986532 2567888899999999999999999999999999999999999999999998543211
Q ss_pred CCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-----CCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001847 829 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLYGYTPFRG 903 (1005)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-----~~~~~~sDIwSlGvll~eLltG~~Pf~~ 903 (1005)
........||..|+|||++.. ...+.++|||||||++|+|++|+.||..
T Consensus 222 --------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~ 275 (353)
T PLN00034 222 --------------------------MDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGV 275 (353)
T ss_pred --------------------------cccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCC
Confidence 011223579999999998743 2334689999999999999999999974
Q ss_pred CChH---HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCC
Q 001847 904 KTRQ---KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 964 (1005)
Q Consensus 904 ~~~~---~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~ 964 (1005)
.... .....+... ........++.++.+||.+||..||++||+ +.++|+||||...
T Consensus 276 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt----~~ell~hp~~~~~ 334 (353)
T PLN00034 276 GRQGDWASLMCAICMS-QPPEAPATASREFRHFISCCLQREPAKRWS----AMQLLQHPFILRA 334 (353)
T ss_pred CCCccHHHHHHHHhcc-CCCCCCCccCHHHHHHHHHHccCChhhCcC----HHHHhcCcccccC
Confidence 3322 122222211 122223356889999999999999999999 9999999999985
No 105
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=9e-38 Score=354.18 Aligned_cols=259 Identities=24% Similarity=0.400 Sum_probs=215.3
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 001847 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 748 (1005)
Q Consensus 669 i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 748 (1005)
+..++|++.+.||.|+||.||++.+..++..+|+|.+.... .......+.+|+++++.++|+||++++++|...+.+|
T Consensus 2 l~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 79 (333)
T cd06650 2 LKDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS 79 (333)
T ss_pred cchhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEE
Confidence 45679999999999999999999999999999999887542 3344567889999999999999999999999999999
Q ss_pred EEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHc-CcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001847 749 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (1005)
Q Consensus 749 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~-gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 827 (1005)
+||||+.+++|.+++... +.+++..+..++.||+.||.|||+. +|+|+||||+|||++.+|.+||+|||++.....
T Consensus 80 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~- 156 (333)
T cd06650 80 ICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID- 156 (333)
T ss_pred EEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhh-
Confidence 999999999999999764 4589999999999999999999985 799999999999999999999999998843211
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001847 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 907 (1005)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~ 907 (1005)
.......|++.|+|||++.+..++.++|||||||++|+|++|+.||......
T Consensus 157 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~ 208 (333)
T cd06650 157 ----------------------------SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAK 208 (333)
T ss_pred ----------------------------hccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchh
Confidence 0112346899999999998888899999999999999999999999765443
Q ss_pred HHHHHH--------------------------------------------HhCCCCCCCCCCCCHHHHHHHHHccccCcC
Q 001847 908 KTFANI--------------------------------------------LHKDLKFPSSTPTSLHAKQLMYRLLHRDPK 943 (1005)
Q Consensus 908 ~~~~~i--------------------------------------------~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~ 943 (1005)
.....+ .....+.......+.++.+||.+||++||+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~ 288 (333)
T cd06650 209 ELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPA 288 (333)
T ss_pred HHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcc
Confidence 221111 111111111123567889999999999999
Q ss_pred ccCCChhcHHHHHcCCCCCCC
Q 001847 944 SRLGSHEGANEIKKHPFFKGV 964 (1005)
Q Consensus 944 ~Rpt~~~~a~elL~hpff~~~ 964 (1005)
+||+ +.++++||||+..
T Consensus 289 ~Rpt----~~ell~h~~~~~~ 305 (333)
T cd06650 289 ERAD----LKQLMVHAFIKRS 305 (333)
T ss_pred cCcC----HHHHhhCHHHhcC
Confidence 9999 9999999999864
No 106
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-40 Score=339.82 Aligned_cols=256 Identities=26% Similarity=0.433 Sum_probs=223.8
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 752 (1005)
-|.++.+||+|+||.||++.++.+|..+|+|.+... ...+.+..|+.|+.++++++||++|+.|.....+|||||
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~-----sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVME 108 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD-----TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVME 108 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc-----chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehh
Confidence 378999999999999999999999999999987643 457889999999999999999999999999999999999
Q ss_pred ccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001847 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (1005)
Q Consensus 753 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 832 (1005)
||..|++.+.++.+ .+.|++..+..+++..+.||.|||...-||||||..|||++.+|.+||.|||.+-.
T Consensus 109 YCGAGSiSDI~R~R-~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQ--------- 178 (502)
T KOG0574|consen 109 YCGAGSISDIMRAR-RKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQ--------- 178 (502)
T ss_pred hcCCCcHHHHHHHh-cCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccch---------
Confidence 99999999999754 46799999999999999999999999999999999999999999999999999833
Q ss_pred CcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001847 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 912 (1005)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~~ 912 (1005)
..+.....+++.|||.|||||++....|+.++||||||++..+|..|++||....+...+..
T Consensus 179 ------------------LTDTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFM 240 (502)
T KOG0574|consen 179 ------------------LTDTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFM 240 (502)
T ss_pred ------------------hhhhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEe
Confidence 23344556788999999999999999999999999999999999999999988776555443
Q ss_pred HHhCCC-CCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCC
Q 001847 913 ILHKDL-KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 965 (1005)
Q Consensus 913 i~~~~~-~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~ 965 (1005)
|-.... .+.....-|.++.+|+++||.++|++|.| |-+|++|||+++..
T Consensus 241 IPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~T----A~~L~~H~FiknA~ 290 (502)
T KOG0574|consen 241 IPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKT----ALRLCEHTFIKNAP 290 (502)
T ss_pred ccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHH----HHHHhhhhhhcCCC
Confidence 333222 22233334778999999999999999999 99999999999854
No 107
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-39 Score=356.01 Aligned_cols=254 Identities=26% Similarity=0.379 Sum_probs=232.1
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 752 (1005)
.|.-++.||.|+||.||-+++..+...||||.+............++..|+..|+++.|||++.+.+||......|+|||
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence 58889999999999999999999999999999998766677888999999999999999999999999999999999999
Q ss_pred ccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001847 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (1005)
Q Consensus 753 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 832 (1005)
|| -|+-.+++... .+++.+-.+..|+.+.+.||+|||+.+.||||||..|||+++.|.|||+|||.|..+.
T Consensus 107 YC-lGSAsDlleVh-kKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~------- 177 (948)
T KOG0577|consen 107 YC-LGSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMA------- 177 (948)
T ss_pred HH-hccHHHHHHHH-hccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcC-------
Confidence 99 77888888754 3569999999999999999999999999999999999999999999999999986543
Q ss_pred CcchhhhhcccCCCCCcccccccccccccccCCcccccccccC---CCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001847 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG---AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 909 (1005)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~---~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~ 909 (1005)
+.++++|||+|||||++.. +.|+-++||||||++..+|...++|+...+.+..
T Consensus 178 ------------------------PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSA 233 (948)
T KOG0577|consen 178 ------------------------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA 233 (948)
T ss_pred ------------------------chhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHH
Confidence 3457899999999999854 5788899999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCC
Q 001847 910 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 963 (1005)
Q Consensus 910 ~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~ 963 (1005)
+.-|.+...+......-+..+.+|+..||++-|.+||| .+++|+|+|...
T Consensus 234 LYHIAQNesPtLqs~eWS~~F~~Fvd~CLqKipqeRpt----se~ll~H~fv~R 283 (948)
T KOG0577|consen 234 LYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQERPT----SEELLKHRFVLR 283 (948)
T ss_pred HHHHHhcCCCCCCCchhHHHHHHHHHHHHhhCcccCCc----HHHHhhcchhcc
Confidence 99998887776666667889999999999999999999 999999999875
No 108
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.2e-38 Score=351.17 Aligned_cols=260 Identities=26% Similarity=0.427 Sum_probs=212.2
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeE
Q 001847 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHV 747 (1005)
Q Consensus 669 i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~ 747 (1005)
++...|++++.||+||.+.||+|...+ ...||+|.+... ..+......+.+|+.+|.+| .|.+|+++++|-..++++
T Consensus 358 Vkg~~Yeilk~iG~GGSSkV~kV~~s~-~~iyalkkv~~~-~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~l 435 (677)
T KOG0596|consen 358 VKGREYEILKQIGSGGSSKVFKVLNSD-KQIYALKKVVLL-EADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYL 435 (677)
T ss_pred ECcchhhHHHhhcCCCcceeeeeecCC-CcchhhhHHHHh-hcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceE
Confidence 567889999999999999999999844 445555554432 33667788999999999999 699999999999999999
Q ss_pred EEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001847 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (1005)
Q Consensus 748 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 827 (1005)
|+||||- ..+|...|++.. ..++...++.|..|+|.|+.++|+.||||.||||.|+|+. .|.+||+|||.|..+..+
T Consensus 436 YmvmE~G-d~DL~kiL~k~~-~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~D 512 (677)
T KOG0596|consen 436 YMVMECG-DIDLNKILKKKK-SIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPD 512 (677)
T ss_pred EEEeecc-cccHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE-eeeEEeeeechhcccCcc
Confidence 9999997 889999998653 4455568999999999999999999999999999999999 789999999999665433
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCC-----------CCChhhHHHHHHHHHHHHc
Q 001847 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-----------HTSAVDWWALGILLYEMLY 896 (1005)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~-----------~~~~sDIwSlGvll~eLlt 896 (1005)
.. +-...+.+||+.||+||.+.... .+.++|||||||+||+|+.
T Consensus 513 TT-------------------------sI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvY 567 (677)
T KOG0596|consen 513 TT-------------------------SIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVY 567 (677)
T ss_pred cc-------------------------ceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHh
Confidence 22 22345678999999999996543 4568999999999999999
Q ss_pred CCCCCCCCC-hHHHHHHHHhC--CCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCC
Q 001847 897 GYTPFRGKT-RQKTFANILHK--DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 963 (1005)
Q Consensus 897 G~~Pf~~~~-~~~~~~~i~~~--~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~ 963 (1005)
|+.||.... ....+..|..- .+.+|..+.. .+++++++.||.+||.+||+ +.+||+|||++.
T Consensus 568 gktPf~~~~n~~aKl~aI~~P~~~Iefp~~~~~-~~li~~mK~CL~rdPkkR~s----i~eLLqhpFl~~ 632 (677)
T KOG0596|consen 568 GKTPFGQIINQIAKLHAITDPNHEIEFPDIPEN-DELIDVMKCCLARDPKKRWS----IPELLQHPFLQI 632 (677)
T ss_pred cCCchHHHHHHHHHHHhhcCCCccccccCCCCc-hHHHHHHHHHHhcCcccCCC----cHHHhcCccccc
Confidence 999997644 33334444443 3455554432 34999999999999999999 999999999996
No 109
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-38 Score=353.97 Aligned_cols=255 Identities=25% Similarity=0.399 Sum_probs=218.6
Q ss_pred ccccccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 001847 664 DSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 743 (1005)
Q Consensus 664 ~~~~~i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 743 (1005)
...+.+....+++++.||+|.||.||++.+.. ...+|+|.++.... ....+.+|+++|++|+|++||++++++..
T Consensus 198 ~d~wei~r~~l~l~~~LG~G~FG~V~~g~~~~-~~~vavk~ik~~~m----~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~ 272 (468)
T KOG0197|consen 198 RDPWEIPREELKLIRELGSGQFGEVWLGKWNG-STKVAVKTIKEGSM----SPEAFLREAQIMKKLRHEKLVKLYGVCTK 272 (468)
T ss_pred cCCeeecHHHHHHHHHhcCCccceEEEEEEcC-CCcccceEEecccc----ChhHHHHHHHHHHhCcccCeEEEEEEEec
Confidence 34556777889999999999999999999933 34799999887533 33567799999999999999999999999
Q ss_pred CCeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcc
Q 001847 744 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 823 (1005)
Q Consensus 744 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~ 823 (1005)
+..+|||||||+.|+|.++++...+..+...+...++.||++|++||+++++|||||-..||||++++.|||+|||+|+.
T Consensus 273 ~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~ 352 (468)
T KOG0197|consen 273 QEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARL 352 (468)
T ss_pred CCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccc
Confidence 88999999999999999999986677899999999999999999999999999999999999999999999999999984
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCC
Q 001847 824 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFR 902 (1005)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~Pf~ 902 (1005)
..++.- . ....---...|.|||++....++.+|||||||++||||+| |+.||.
T Consensus 353 ~~d~~Y----------~----------------~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~ 406 (468)
T KOG0197|consen 353 IGDDEY----------T----------------ASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYP 406 (468)
T ss_pred cCCCce----------e----------------ecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCC
Confidence 332211 0 0111112446999999999999999999999999999997 999999
Q ss_pred CCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChh
Q 001847 903 GKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 950 (1005)
Q Consensus 903 ~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~ 950 (1005)
+.+..+.+..+.++ ...|.+..++.++.+++..||..+|++||||..
T Consensus 407 ~msn~ev~~~le~G-yRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~ 453 (468)
T KOG0197|consen 407 GMSNEEVLELLERG-YRLPRPEGCPDEVYELMKSCWHEDPEDRPTFET 453 (468)
T ss_pred CCCHHHHHHHHhcc-CcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHH
Confidence 99999988777665 455666678999999999999999999999653
No 110
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=1.6e-37 Score=357.70 Aligned_cols=261 Identities=27% Similarity=0.407 Sum_probs=213.4
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC-----eE
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT-----HV 747 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~-----~~ 747 (1005)
+|++.+.||+|+||.||++.+..+++.||+|.+... .........+.+|+.+++.++|+||+++++++...+ .+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 79 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNV-FQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEI 79 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEecccc-ccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceE
Confidence 478899999999999999999999999999988653 223345567889999999999999999999998776 79
Q ss_pred EEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001847 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (1005)
Q Consensus 748 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 827 (1005)
|+||||+ +++|..++... ..++...++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 80 ~lv~e~~-~~~l~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~ 156 (372)
T cd07853 80 YVVTELM-QSDLHKIIVSP--QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPD 156 (372)
T ss_pred EEEeecc-ccCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccC
Confidence 9999999 46788877553 45899999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001847 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTR 906 (1005)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlGvll~eLltG~~Pf~~~~~ 906 (1005)
.. .......+++.|+|||++.+. .++.++|||||||++|+|++|+.||.+.+.
T Consensus 157 ~~--------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~ 210 (372)
T cd07853 157 ES--------------------------KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSP 210 (372)
T ss_pred cc--------------------------ccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCH
Confidence 10 111234678999999998774 468899999999999999999999988776
Q ss_pred HHHHHHHHhC-----------------------CCCC-------CCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHH
Q 001847 907 QKTFANILHK-----------------------DLKF-------PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 956 (1005)
Q Consensus 907 ~~~~~~i~~~-----------------------~~~~-------~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL 956 (1005)
...+..+... .... ......+.++.+||.+||+.||.+||| +.++|
T Consensus 211 ~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t----~~e~l 286 (372)
T cd07853 211 IQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRIS----AADAL 286 (372)
T ss_pred HHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcC----HHHHh
Confidence 6555444321 1111 111234778899999999999999999 99999
Q ss_pred cCCCCCCCChh
Q 001847 957 KHPFFKGVNWA 967 (1005)
Q Consensus 957 ~hpff~~~~~~ 967 (1005)
+||||+...+.
T Consensus 287 ~hp~~~~~~~~ 297 (372)
T cd07853 287 AHPYLDEGRLR 297 (372)
T ss_pred cCHhhCCCcch
Confidence 99999986543
No 111
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.4e-37 Score=356.52 Aligned_cols=255 Identities=25% Similarity=0.484 Sum_probs=207.5
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC-----
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT----- 745 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~----- 745 (1005)
.++|++++.||+|+||.||++.+..+|+.||+|.+.... ........+.+|+.+++.++||||++++++|...+
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPF-QNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccc-cchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 579999999999999999999999999999999987542 23344567788999999999999999999986543
Q ss_pred -eEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCccc
Q 001847 746 -HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 824 (1005)
Q Consensus 746 -~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~ 824 (1005)
.+|+||||+. ++|...+.. .++...+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||++...
T Consensus 99 ~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~ 173 (359)
T cd07876 99 QDVYLVMELMD-ANLCQVIHM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 173 (359)
T ss_pred ceeEEEEeCCC-cCHHHHHhc----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCcccc
Confidence 5799999995 566666543 3788999999999999999999999999999999999999999999999998542
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001847 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 904 (1005)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~ 904 (1005)
... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.
T Consensus 174 ~~~----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~ 225 (359)
T cd07876 174 CTN----------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGT 225 (359)
T ss_pred ccC----------------------------ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 211 0112346899999999999988999999999999999999999999876
Q ss_pred ChHHHHHHHHh----------------------CCCCCC--------------C----CCCCCHHHHHHHHHccccCcCc
Q 001847 905 TRQKTFANILH----------------------KDLKFP--------------S----STPTSLHAKQLMYRLLHRDPKS 944 (1005)
Q Consensus 905 ~~~~~~~~i~~----------------------~~~~~~--------------~----~~~~s~~l~~Ll~~~L~~dP~~ 944 (1005)
+....+..+.. ....++ . ....+..+.+||.+||+.||.+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~ 305 (359)
T cd07876 226 DHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDK 305 (359)
T ss_pred CHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCccc
Confidence 65433322211 111110 0 0113567899999999999999
Q ss_pred cCCChhcHHHHHcCCCCCC
Q 001847 945 RLGSHEGANEIKKHPFFKG 963 (1005)
Q Consensus 945 Rpt~~~~a~elL~hpff~~ 963 (1005)
||| +.++|+||||..
T Consensus 306 R~t----~~e~l~hp~~~~ 320 (359)
T cd07876 306 RIS----VDEALRHPYITV 320 (359)
T ss_pred CCC----HHHHhcCchhhh
Confidence 999 999999999985
No 112
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2e-37 Score=355.87 Aligned_cols=255 Identities=24% Similarity=0.461 Sum_probs=210.0
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC------
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 744 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------ 744 (1005)
.++|++++.||+|+||.||++.+..+++.||||.+.... ........+.+|+.+++.++||||+.+++++...
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccc-cCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 578999999999999999999999999999999987542 2334456778899999999999999999987543
Q ss_pred CeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCccc
Q 001847 745 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 824 (1005)
Q Consensus 745 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~ 824 (1005)
..+|+||||+ +++|...+.. .++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 102 ~~~~lv~e~~-~~~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 176 (364)
T cd07875 102 QDVYIVMELM-DANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 176 (364)
T ss_pred CeEEEEEeCC-CCCHHHHHHh----cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCcccc
Confidence 3579999999 4577777653 3788999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001847 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 904 (1005)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~ 904 (1005)
... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.
T Consensus 177 ~~~----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 228 (364)
T cd07875 177 GTS----------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228 (364)
T ss_pred CCC----------------------------CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCC
Confidence 211 0112346899999999999989999999999999999999999999887
Q ss_pred ChHHHHHHHHhCC----------------------CCC--------------CC----CCCCCHHHHHHHHHccccCcCc
Q 001847 905 TRQKTFANILHKD----------------------LKF--------------PS----STPTSLHAKQLMYRLLHRDPKS 944 (1005)
Q Consensus 905 ~~~~~~~~i~~~~----------------------~~~--------------~~----~~~~s~~l~~Ll~~~L~~dP~~ 944 (1005)
+....+..++... ..+ +. ....+..+++||.+||+.||.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~ 308 (364)
T cd07875 229 DHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASK 308 (364)
T ss_pred CHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCccc
Confidence 7766555544310 000 00 0112457889999999999999
Q ss_pred cCCChhcHHHHHcCCCCCC
Q 001847 945 RLGSHEGANEIKKHPFFKG 963 (1005)
Q Consensus 945 Rpt~~~~a~elL~hpff~~ 963 (1005)
||| +.++|+||||..
T Consensus 309 R~t----~~e~L~hp~~~~ 323 (364)
T cd07875 309 RIS----VDEALQHPYINV 323 (364)
T ss_pred CCC----HHHHhcCccccc
Confidence 999 999999999985
No 113
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=1.6e-37 Score=364.48 Aligned_cols=256 Identities=26% Similarity=0.419 Sum_probs=206.6
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC------
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 744 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------ 744 (1005)
..+|++++.||+|+||.||+|.+..+++.||||.+.... ....+|+.+++.++||||++++++|...
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~ 137 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNE 137 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-------chHHHHHHHHHhcCCCCCcceeeeEeecccccCC
Confidence 457999999999999999999999999999999886431 2234699999999999999999887432
Q ss_pred --CeEEEEEeccCCCchhhHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCC-cEEEEecc
Q 001847 745 --THVCLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-HVSLTDFD 819 (1005)
Q Consensus 745 --~~~~lV~E~~~ggsL~~~l~~--~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g-~vkL~DFG 819 (1005)
..+++||||++ ++|.+++.. .....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||
T Consensus 138 ~~~~l~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFG 216 (440)
T PTZ00036 138 KNIFLNVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFG 216 (440)
T ss_pred CceEEEEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccc
Confidence 25779999995 577776653 2345699999999999999999999999999999999999999664 79999999
Q ss_pred CCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCC
Q 001847 820 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGY 898 (1005)
Q Consensus 820 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlGvll~eLltG~ 898 (1005)
++...... .......||+.|+|||++.+. .++.++|||||||++|+|++|.
T Consensus 217 la~~~~~~----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~ 268 (440)
T PTZ00036 217 SAKNLLAG----------------------------QRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGY 268 (440)
T ss_pred cchhccCC----------------------------CCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 98543211 111235789999999998764 6889999999999999999999
Q ss_pred CCCCCCChHHHHHHHHhC-----------------CCCCCC----------CCCCCHHHHHHHHHccccCcCccCCChhc
Q 001847 899 TPFRGKTRQKTFANILHK-----------------DLKFPS----------STPTSLHAKQLMYRLLHRDPKSRLGSHEG 951 (1005)
Q Consensus 899 ~Pf~~~~~~~~~~~i~~~-----------------~~~~~~----------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~ 951 (1005)
+||.+....+.+..+.+. .+.++. ....+.++.+||.+||++||.+|||
T Consensus 269 ~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~t---- 344 (440)
T PTZ00036 269 PIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLN---- 344 (440)
T ss_pred CCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcC----
Confidence 999988776666555431 111111 1125678999999999999999999
Q ss_pred HHHHHcCCCCCCCCh
Q 001847 952 ANEIKKHPFFKGVNW 966 (1005)
Q Consensus 952 a~elL~hpff~~~~~ 966 (1005)
+.++|+||||..+..
T Consensus 345 a~e~l~hp~f~~~~~ 359 (440)
T PTZ00036 345 PIEALADPFFDDLRD 359 (440)
T ss_pred HHHHhCChhHHhhhc
Confidence 999999999987543
No 114
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=2e-37 Score=347.59 Aligned_cols=260 Identities=23% Similarity=0.417 Sum_probs=213.0
Q ss_pred ccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 001847 670 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 749 (1005)
Q Consensus 670 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 749 (1005)
...+|++++.||+|+||.||++.+..++..+|+|.++.... ......+.+|+.++++++||||+++++++...+..|+
T Consensus 4 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 81 (309)
T cd07872 4 KMETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHE--EGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTL 81 (309)
T ss_pred CCCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeecccc--CCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEE
Confidence 35689999999999999999999999999999999875422 2223456689999999999999999999999999999
Q ss_pred EEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 001847 750 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 829 (1005)
Q Consensus 750 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~ 829 (1005)
||||+. ++|.+++... ...++...++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 82 v~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~- 158 (309)
T cd07872 82 VFEYLD-KDLKQYMDDC-GNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPT- 158 (309)
T ss_pred EEeCCC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCc-
Confidence 999995 5888887654 2458899999999999999999999999999999999999999999999999885422110
Q ss_pred CCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001847 830 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 908 (1005)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~ 908 (1005)
.......+++.|+|||.+.+ ..++.++|||||||++|+|++|+.||.+.+..+
T Consensus 159 --------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~ 212 (309)
T cd07872 159 --------------------------KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVED 212 (309)
T ss_pred --------------------------cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH
Confidence 01123457899999999865 457889999999999999999999998877655
Q ss_pred HHHHHHhC-------------------CCCCC---------CCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCC
Q 001847 909 TFANILHK-------------------DLKFP---------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 960 (1005)
Q Consensus 909 ~~~~i~~~-------------------~~~~~---------~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpf 960 (1005)
....+... ...++ ....++.++.+||.+||..||.+||| +.++|+|||
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t----~~e~l~h~~ 288 (309)
T cd07872 213 ELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRIS----AEEAMKHAY 288 (309)
T ss_pred HHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCC----HHHHhcChh
Confidence 54444321 00111 11235778999999999999999999 999999999
Q ss_pred CCCC
Q 001847 961 FKGV 964 (1005)
Q Consensus 961 f~~~ 964 (1005)
|+.+
T Consensus 289 ~~~~ 292 (309)
T cd07872 289 FRSL 292 (309)
T ss_pred hhhc
Confidence 9975
No 115
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=2.6e-37 Score=353.66 Aligned_cols=257 Identities=25% Similarity=0.460 Sum_probs=209.0
Q ss_pred ccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC-----
Q 001847 670 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK----- 744 (1005)
Q Consensus 670 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~----- 744 (1005)
..++|++++.||+|+||.||++.+..+++.||+|.+.... ........+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcc-cChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 3579999999999999999999999999999999987642 2334456778899999999999999999988643
Q ss_pred -CeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcc
Q 001847 745 -THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 823 (1005)
Q Consensus 745 -~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~ 823 (1005)
..+|+||||+. ++|.+.+.. .++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++..
T Consensus 94 ~~~~~lv~e~~~-~~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~ 168 (355)
T cd07874 94 FQDVYLVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 168 (355)
T ss_pred cceeEEEhhhhc-ccHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCccccc
Confidence 35799999994 567776653 388999999999999999999999999999999999999999999999999854
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001847 824 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 903 (1005)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~ 903 (1005)
.... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+
T Consensus 169 ~~~~----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 220 (355)
T cd07874 169 AGTS----------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 220 (355)
T ss_pred CCCc----------------------------cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 3211 011234689999999999988899999999999999999999999988
Q ss_pred CChHHHHHHHHhC----------------------CCC-----CC-------------CCCCCCHHHHHHHHHccccCcC
Q 001847 904 KTRQKTFANILHK----------------------DLK-----FP-------------SSTPTSLHAKQLMYRLLHRDPK 943 (1005)
Q Consensus 904 ~~~~~~~~~i~~~----------------------~~~-----~~-------------~~~~~s~~l~~Ll~~~L~~dP~ 943 (1005)
.+....+..+... ... ++ .....+..+.+||.+||..||.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~ 300 (355)
T cd07874 221 RDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 300 (355)
T ss_pred CCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCch
Confidence 7655444332211 000 00 0011345788999999999999
Q ss_pred ccCCChhcHHHHHcCCCCCCC
Q 001847 944 SRLGSHEGANEIKKHPFFKGV 964 (1005)
Q Consensus 944 ~Rpt~~~~a~elL~hpff~~~ 964 (1005)
+||| +.++|+||||...
T Consensus 301 ~Rps----~~ell~hp~~~~~ 317 (355)
T cd07874 301 KRIS----VDEALQHPYINVW 317 (355)
T ss_pred hcCC----HHHHhcCcchhcc
Confidence 9999 9999999999854
No 116
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=2e-37 Score=343.45 Aligned_cols=255 Identities=28% Similarity=0.461 Sum_probs=206.1
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC---CCCCcceEEEEEEe-----C
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML---DHPFVPALYASFQT-----K 744 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l---~hpnIv~l~~~~~~-----~ 744 (1005)
+|++++.||+|+||.||+|.+..+++.||+|.++..... ........+|+.+++.+ +||||+++++++.. .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~ 79 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNE-DGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE 79 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCC-CCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence 589999999999999999999999999999998754221 22223445666666655 79999999998864 3
Q ss_pred CeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCccc
Q 001847 745 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 824 (1005)
Q Consensus 745 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~ 824 (1005)
..+++||||+. ++|.+++.......+++..++.++.||+.||.|||++||+|+||||+|||++.++.+||+|||++...
T Consensus 80 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~ 158 (288)
T cd07863 80 TKVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIY 158 (288)
T ss_pred ceEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCccccc
Confidence 46899999995 58988887654456899999999999999999999999999999999999999999999999988543
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001847 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 904 (1005)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~ 904 (1005)
... .......|++.|+|||++.+..++.++|||||||++|+|++|++||.+.
T Consensus 159 ~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~ 210 (288)
T cd07863 159 SCQ----------------------------MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGN 210 (288)
T ss_pred cCc----------------------------ccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCC
Confidence 211 0112346889999999998888999999999999999999999999887
Q ss_pred ChHHHHHHHHhCC-----CCCC--------------------CCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCC
Q 001847 905 TRQKTFANILHKD-----LKFP--------------------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHP 959 (1005)
Q Consensus 905 ~~~~~~~~i~~~~-----~~~~--------------------~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hp 959 (1005)
.....+..+.... ..++ ....++..+.+||.+||++||.+||| +.+++.||
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~~~l~hp 286 (288)
T cd07863 211 SEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRIS----AFRALQHP 286 (288)
T ss_pred CHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCC----HHHHhcCC
Confidence 7665555543310 0000 01235677899999999999999999 99999999
Q ss_pred CC
Q 001847 960 FF 961 (1005)
Q Consensus 960 ff 961 (1005)
||
T Consensus 287 ~f 288 (288)
T cd07863 287 FF 288 (288)
T ss_pred CC
Confidence 98
No 117
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=9.4e-37 Score=333.15 Aligned_cols=260 Identities=26% Similarity=0.382 Sum_probs=219.6
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeeccccc--ChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--NRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 749 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 749 (1005)
+.|.+.+.||+|++|.||++.+..+++.|++|.+...... .......+.+|+.++++++||||+++++++.....+|+
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 4689999999999999999999999999999998754221 12234577889999999999999999999999999999
Q ss_pred EEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 001847 750 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 829 (1005)
Q Consensus 750 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~ 829 (1005)
||||+++++|.+++... ..++...++.++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++........
T Consensus 82 v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~ 159 (263)
T cd06625 82 FMEYMPGGSVKDQLKAY--GALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICS 159 (263)
T ss_pred EEEECCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecccccc
Confidence 99999999999998764 4589999999999999999999999999999999999999999999999998854321100
Q ss_pred CCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001847 830 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 909 (1005)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~ 909 (1005)
.........|+..|+|||++.+..++.++|||||||++|+|++|+.||........
T Consensus 160 ------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~ 215 (263)
T cd06625 160 ------------------------SGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAA 215 (263)
T ss_pred ------------------------ccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHH
Confidence 00011234678899999999988899999999999999999999999988776666
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCC
Q 001847 910 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 961 (1005)
Q Consensus 910 ~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff 961 (1005)
...+.............+..+.+||.+||..+|.+||+ +.++++|+||
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~ll~~~~~ 263 (263)
T cd06625 216 IFKIATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPS----AEELLRHFFV 263 (263)
T ss_pred HHHHhccCCCCCCCccCCHHHHHHHHHHhhcCcccCCC----HHHHhhCCCC
Confidence 66655544443334457889999999999999999999 9999999998
No 118
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=3e-37 Score=366.61 Aligned_cols=270 Identities=28% Similarity=0.409 Sum_probs=226.1
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC---
Q 001847 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT--- 745 (1005)
Q Consensus 669 i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~--- 745 (1005)
...++|++.+.||+|+||.||++.+..+++.||||.+..... .......+.+|+.++..++|+||++++..+...+
T Consensus 29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~ 107 (496)
T PTZ00283 29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGM-SEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRN 107 (496)
T ss_pred ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccC
Confidence 345799999999999999999999999999999999876533 3445567788999999999999999988775432
Q ss_pred -----eEEEEEeccCCCchhhHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEec
Q 001847 746 -----HVCLITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDF 818 (1005)
Q Consensus 746 -----~~~lV~E~~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DF 818 (1005)
.+++||||+++|+|.+++... ....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+||
T Consensus 108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DF 187 (496)
T PTZ00283 108 PENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDF 187 (496)
T ss_pred cccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEec
Confidence 378999999999999998642 2346899999999999999999999999999999999999999999999999
Q ss_pred cCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCC
Q 001847 819 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGY 898 (1005)
Q Consensus 819 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~ 898 (1005)
|++........ .......+||+.|+|||++.+..++.++|||||||++|+|++|+
T Consensus 188 Gls~~~~~~~~-------------------------~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~ 242 (496)
T PTZ00283 188 GFSKMYAATVS-------------------------DDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLK 242 (496)
T ss_pred ccCeecccccc-------------------------ccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCC
Confidence 99854321100 01123467999999999999988999999999999999999999
Q ss_pred CCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCChhhh
Q 001847 899 TPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 969 (1005)
Q Consensus 899 ~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~~~~~ 969 (1005)
.||.+.+..+.+..+..+... +....++..+.+|+.+||+.||.+||+ +.++++|||++...-...
T Consensus 243 ~Pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~L~~dP~~RPs----~~ell~~p~~~~~~~~~~ 308 (496)
T PTZ00283 243 RPFDGENMEEVMHKTLAGRYD-PLPPSISPEMQEIVTALLSSDPKRRPS----SSKLLNMPICKLFISGLL 308 (496)
T ss_pred CCCCCCCHHHHHHHHhcCCCC-CCCCCCCHHHHHHHHHHcccChhhCcC----HHHHHhCHHHHHhhhhHH
Confidence 999988887777777665443 223457889999999999999999999 999999999987544333
No 119
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-38 Score=336.11 Aligned_cols=283 Identities=36% Similarity=0.697 Sum_probs=248.8
Q ss_pred cccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCC
Q 001847 667 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKT 745 (1005)
Q Consensus 667 ~~i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~ 745 (1005)
..|...+|..+.+||.|+||.|.++..+.+...||||+++++.+-.....+--..|..+|... +-|.+++++.+|+.-+
T Consensus 344 d~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmD 423 (683)
T KOG0696|consen 344 DRIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMD 423 (683)
T ss_pred cceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhh
Confidence 356778999999999999999999999999999999999998776666666666788888777 5689999999999999
Q ss_pred eEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 001847 746 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 825 (1005)
Q Consensus 746 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~ 825 (1005)
.+|+||||++||+|--.+++- +.+.+..+..++..|+-||-+||++|||.||||.+|||++.+|++||.|||+++.--
T Consensus 424 RLyFVMEyvnGGDLMyhiQQ~--GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni 501 (683)
T KOG0696|consen 424 RLYFVMEYVNGGDLMYHIQQV--GKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 501 (683)
T ss_pred heeeEEEEecCchhhhHHHHh--cccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecccccccc
Confidence 999999999999998777653 558899999999999999999999999999999999999999999999999985421
Q ss_pred CCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001847 826 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 905 (1005)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~ 905 (1005)
. ......++||||.|+|||++...+|+..+|-||+|++||||+.|++||.|.+
T Consensus 502 ~---------------------------~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeD 554 (683)
T KOG0696|consen 502 F---------------------------DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED 554 (683)
T ss_pred c---------------------------CCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCC
Confidence 1 1123467899999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCCh-hcHHHHHcCCCCCCCChhhhhh--cCCCCCCCCCC
Q 001847 906 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRC--MNPPELDAPLF 982 (1005)
Q Consensus 906 ~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~hpff~~~~~~~~~~--~~~~~~~~p~~ 982 (1005)
..+.+..|...+..+|.+ +|.++.++.+..|.+.|.+|+..- +.-.++..||||+.++|..++. .+||-. |..
T Consensus 555 E~elF~aI~ehnvsyPKs--lSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDWek~E~~eiqPPfk--Pk~ 630 (683)
T KOG0696|consen 555 EDELFQAIMEHNVSYPKS--LSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRIDWEKLERREIQPPFK--PKI 630 (683)
T ss_pred HHHHHHHHHHccCcCccc--ccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhccHHHHhhccCCCCCC--Ccc
Confidence 999999999999888876 689999999999999999998764 3346899999999999998854 455544 554
No 120
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=1.1e-36 Score=338.61 Aligned_cols=264 Identities=26% Similarity=0.445 Sum_probs=221.8
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 750 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 750 (1005)
.+.|++++.||.|+||.||++.+..+++.+++|.+... .......+.+|+.+++.++|+||+++++++...+.+|+|
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIM 87 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEE
Confidence 46799999999999999999999999999999998754 345567788899999999999999999999999999999
Q ss_pred EeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001847 751 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (1005)
Q Consensus 751 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 830 (1005)
|||+.+++|..++.... ..+++..+..++.||+.+|.|||+.|++|+||||+||+++.++.++|+|||++......
T Consensus 88 ~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~--- 163 (292)
T cd06644 88 IEFCPGGAVDAIMLELD-RGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT--- 163 (292)
T ss_pred EecCCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceecccc---
Confidence 99999999988875432 45899999999999999999999999999999999999999999999999987432110
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-----CCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001847 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLYGYTPFRGKT 905 (1005)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-----~~~~~~sDIwSlGvll~eLltG~~Pf~~~~ 905 (1005)
........+++.|+|||++.. ..++.++|||||||++|+|++|..||...+
T Consensus 164 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~ 219 (292)
T cd06644 164 ------------------------LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN 219 (292)
T ss_pred ------------------------ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCcccc
Confidence 011223468889999999853 346778999999999999999999998877
Q ss_pred hHHHHHHHHhCCC-CCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCChhhh
Q 001847 906 RQKTFANILHKDL-KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 969 (1005)
Q Consensus 906 ~~~~~~~i~~~~~-~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~~~~~ 969 (1005)
....+..+..... .......++..+.+||.+||..+|++||+ +.++++||||..++++..
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~il~~~~~~~~~~~~~ 280 (292)
T cd06644 220 PMRVLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPS----AAQLLEHPFVSSVTSNRP 280 (292)
T ss_pred HHHHHHHHhcCCCccCCCCcccCHHHHHHHHHHhcCCcccCcC----HHHHhcCccccccccchh
Confidence 6665555554432 22223446788999999999999999999 999999999999888754
No 121
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-38 Score=318.14 Aligned_cols=261 Identities=27% Similarity=0.431 Sum_probs=221.9
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeE
Q 001847 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHV 747 (1005)
Q Consensus 669 i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~ 747 (1005)
.+.++.+.+..||+|+.|+||++..+.+|...|||.+.+. .+....++++..+.++... ++|+||+++++|..+..+
T Consensus 89 ~dindl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt--~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV 166 (391)
T KOG0983|consen 89 ADINDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRT--GNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDV 166 (391)
T ss_pred cChHHhhhHHhhcCCCccceEEEEEcccceEEEEEeeccc--CCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchH
Confidence 3456778889999999999999999999999999999875 3567778888888887666 599999999999999999
Q ss_pred EEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHc-CcccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 001847 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 826 (1005)
Q Consensus 748 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~-gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~ 826 (1005)
++.||.| ...+..++++. .+++++..+-.+..-++.||.||-.+ ||+|||+||+|||++..|++||||||.+-.+.+
T Consensus 167 ~IcMelM-s~C~ekLlkri-k~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvd 244 (391)
T KOG0983|consen 167 FICMELM-STCAEKLLKRI-KGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVD 244 (391)
T ss_pred HHHHHHH-HHHHHHHHHHh-cCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeec
Confidence 9999999 66676666654 45699999999999999999999976 899999999999999999999999999855432
Q ss_pred CCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC---CCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001847 827 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG---AGHTSAVDWWALGILLYEMLYGYTPFRG 903 (1005)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~---~~~~~~sDIwSlGvll~eLltG~~Pf~~ 903 (1005)
+ .......|-+.|||||.+.- ..|+.++||||||++++||+||+.||.+
T Consensus 245 S----------------------------kAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~ 296 (391)
T KOG0983|consen 245 S----------------------------KAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKG 296 (391)
T ss_pred c----------------------------cccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCC
Confidence 1 22334579999999999854 4678899999999999999999999988
Q ss_pred C-ChHHHHHHHHhCCCC-CCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCC
Q 001847 904 K-TRQKTFANILHKDLK-FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 965 (1005)
Q Consensus 904 ~-~~~~~~~~i~~~~~~-~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~ 965 (1005)
. ...+.+.+++....+ ++.....|+.+.+|+..||++|+.+||. ..+||+|||+....
T Consensus 297 c~tdFe~ltkvln~ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~----Y~~Ll~h~Fi~~ye 356 (391)
T KOG0983|consen 297 CKTDFEVLTKVLNEEPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPK----YNKLLEHPFIKRYE 356 (391)
T ss_pred CCccHHHHHHHHhcCCCCCCcccCcCHHHHHHHHHHhhcCcccCcc----hHHHhcCcceeecc
Confidence 4 557778888876543 3444558999999999999999999999 99999999998743
No 122
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=5.6e-37 Score=363.60 Aligned_cols=254 Identities=23% Similarity=0.380 Sum_probs=202.2
Q ss_pred ccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCC------CCcceEEEEEEe
Q 001847 670 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH------PFVPALYASFQT 743 (1005)
Q Consensus 670 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~h------pnIv~l~~~~~~ 743 (1005)
..++|++++.||+|+||.||+|.+..+++.||||+++.. .........|+.+++.+.| .+++.++++|..
T Consensus 127 ~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~ 202 (467)
T PTZ00284 127 STQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNV----PKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN 202 (467)
T ss_pred CCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecc----hhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence 357899999999999999999999999999999998642 1222344557777766644 458889888875
Q ss_pred C-CeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCcccCCCCCCcEEEecCC----------
Q 001847 744 K-THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNG---------- 811 (1005)
Q Consensus 744 ~-~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~-~gIvHrDLkP~NILi~~~g---------- 811 (1005)
. .++|+||+++ |++|.+++... +.+++..++.++.||+.||.|||+ .|||||||||+|||++.++
T Consensus 203 ~~~~~~iv~~~~-g~~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~ 279 (467)
T PTZ00284 203 ETGHMCIVMPKY-GPCLLDWIMKH--GPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRA 279 (467)
T ss_pred CCceEEEEEecc-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccc
Confidence 4 5789999999 88898888664 459999999999999999999998 5999999999999998765
Q ss_pred ------cEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHH
Q 001847 812 ------HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 885 (1005)
Q Consensus 812 ------~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIw 885 (1005)
.+||+|||.+.... ......+||+.|+|||++.+..++.++|||
T Consensus 280 ~~~~~~~vkl~DfG~~~~~~------------------------------~~~~~~~gt~~Y~APE~~~~~~~~~~~Diw 329 (467)
T PTZ00284 280 LPPDPCRVRICDLGGCCDER------------------------------HSRTAIVSTRHYRSPEVVLGLGWMYSTDMW 329 (467)
T ss_pred cCCCCceEEECCCCccccCc------------------------------cccccccCCccccCcHHhhcCCCCcHHHHH
Confidence 49999999773211 112345799999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCCCC------------------------C----------------CCC
Q 001847 886 ALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFP------------------------S----------------STP 925 (1005)
Q Consensus 886 SlGvll~eLltG~~Pf~~~~~~~~~~~i~~~~~~~~------------------------~----------------~~~ 925 (1005)
||||++|+|++|+.||.+.+..+.+..+......++ . ...
T Consensus 330 SlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (467)
T PTZ00284 330 SMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVI 409 (467)
T ss_pred HHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhh
Confidence 999999999999999988776554443322100000 0 001
Q ss_pred CCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCC
Q 001847 926 TSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 964 (1005)
Q Consensus 926 ~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~ 964 (1005)
.+..+.+||.+||++||.+||| ++++|+||||...
T Consensus 410 ~~~~~~dli~~mL~~dP~~R~t----a~e~L~Hp~~~~~ 444 (467)
T PTZ00284 410 RDDLLCDLIYGLLHYDRQKRLN----ARQMTTHPYVLKY 444 (467)
T ss_pred chHHHHHHHHHhCCcChhhCCC----HHHHhcCcccccc
Confidence 1345779999999999999999 9999999999874
No 123
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=7.2e-37 Score=337.38 Aligned_cols=264 Identities=34% Similarity=0.601 Sum_probs=218.1
Q ss_pred ccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCCch
Q 001847 680 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 759 (1005)
Q Consensus 680 LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ggsL 759 (1005)
||+|+||.||+|.+..+|+.|++|.+.............+..|+++++.++||||+++++++...+..|+||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 69999999999999999999999998765433334455667899999999999999999999999999999999999999
Q ss_pred hhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhh
Q 001847 760 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 839 (1005)
Q Consensus 760 ~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~ 839 (1005)
.+++.......+++..+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||.+......
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~------------ 148 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG------------ 148 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccC------------
Confidence 99987655456999999999999999999999999999999999999999999999999987543210
Q ss_pred hcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCC-
Q 001847 840 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDL- 918 (1005)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~~i~~~~~- 918 (1005)
.......++..|+|||++.+..++.++|||||||++|+|++|+.||...........+.....
T Consensus 149 ----------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 212 (277)
T cd05577 149 ----------------KKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLE 212 (277)
T ss_pred ----------------CccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcccc
Confidence 011223578899999999888888999999999999999999999977544222222222111
Q ss_pred -CCCCCCCCCHHHHHHHHHccccCcCccCCChh-cHHHHHcCCCCCCCChhhhhh
Q 001847 919 -KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANEIKKHPFFKGVNWALVRC 971 (1005)
Q Consensus 919 -~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~-~a~elL~hpff~~~~~~~~~~ 971 (1005)
........+..+.+||.+||+.+|.+||++.+ .+.++++||||+.++|..+..
T Consensus 213 ~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~~~~~~~ 267 (277)
T cd05577 213 MAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLNWRRLEA 267 (277)
T ss_pred ccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcCChhhhhc
Confidence 11222346889999999999999999997776 699999999999999988743
No 124
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=5.3e-37 Score=364.17 Aligned_cols=261 Identities=25% Similarity=0.394 Sum_probs=222.2
Q ss_pred cCCccccccccccCcEEEEEEEEcCC-CeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGS-GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 749 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~-~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 749 (1005)
...|.+.+.||.|++|.||+|.+..+ +..+|+|.+... .......+..|+.+++.++||||++++++|...+.+|+
T Consensus 66 ~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~---~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~l 142 (478)
T PTZ00267 66 EHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN---DERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLL 142 (478)
T ss_pred ceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC---CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEE
Confidence 34599999999999999999999777 788999976533 33444567789999999999999999999999999999
Q ss_pred EEeccCCCchhhHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001847 750 ITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (1005)
Q Consensus 750 V~E~~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 827 (1005)
||||+++++|.+++... ....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 143 v~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~ 222 (478)
T PTZ00267 143 IMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDS 222 (478)
T ss_pred EEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCc
Confidence 99999999999887532 2346899999999999999999999999999999999999999999999999998653211
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001847 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 907 (1005)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~ 907 (1005)
.. .......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..
T Consensus 223 ~~-------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~ 277 (478)
T PTZ00267 223 VS-------------------------LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQR 277 (478)
T ss_pred cc-------------------------cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 00 01123467999999999999888999999999999999999999999988887
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCC
Q 001847 908 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 964 (1005)
Q Consensus 908 ~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~ 964 (1005)
+.+..+..+... +....++..+.+||.+||..+|++||+ +.+++.|+|++.+
T Consensus 278 ~~~~~~~~~~~~-~~~~~~s~~~~~li~~~L~~dP~~Rps----~~~~l~~~~~~~~ 329 (478)
T PTZ00267 278 EIMQQVLYGKYD-PFPCPVSSGMKALLDPLLSKNPALRPT----TQQLLHTEFLKYV 329 (478)
T ss_pred HHHHHHHhCCCC-CCCccCCHHHHHHHHHHhccChhhCcC----HHHHHhCHHHHHH
Confidence 777777766543 222346889999999999999999999 9999999999754
No 125
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=4.2e-37 Score=349.52 Aligned_cols=257 Identities=24% Similarity=0.345 Sum_probs=204.2
Q ss_pred cccccCCccccccccccCcEEEEEEEEc-----CCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceEEEE
Q 001847 667 EQINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYAS 740 (1005)
Q Consensus 667 ~~i~~~~y~~~~~LG~G~~g~Vy~a~~~-----~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~ 740 (1005)
+++..++|++.+.||.|+||.||+|.+. .++..||+|.+.... .......+.+|+.++..+ +||||++++++
T Consensus 2 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~ 79 (338)
T cd05102 2 WEFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA--TASEHKALMSELKILIHIGNHLNVVNLLGA 79 (338)
T ss_pred cccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc--chHHHHHHHHHHHHHHHhccCcceeeEEeE
Confidence 3456679999999999999999999852 345689999987532 233456788999999999 89999999998
Q ss_pred EEeC-CeEEEEEeccCCCchhhHHhhCC----------------------------------------------------
Q 001847 741 FQTK-THVCLITDYCPGGELFLLLDRQP---------------------------------------------------- 767 (1005)
Q Consensus 741 ~~~~-~~~~lV~E~~~ggsL~~~l~~~~---------------------------------------------------- 767 (1005)
+... +.+|+||||+++|+|.+++....
T Consensus 80 ~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (338)
T cd05102 80 CTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNP 159 (338)
T ss_pred ecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCccccc
Confidence 8754 46899999999999999987431
Q ss_pred --------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhh
Q 001847 768 --------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 839 (1005)
Q Consensus 768 --------~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~ 839 (1005)
...++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++........
T Consensus 160 ~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~---------- 229 (338)
T cd05102 160 PQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD---------- 229 (338)
T ss_pred chhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcc----------
Confidence 12477888999999999999999999999999999999999999999999999854321110
Q ss_pred hcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCC
Q 001847 840 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILHKDL 918 (1005)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~Pf~~~~~~~~~~~i~~~~~ 918 (1005)
........+++.|+|||++.+..++.++|||||||++|+|++ |..||.+......+...+....
T Consensus 230 ---------------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~ 294 (338)
T cd05102 230 ---------------YVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGT 294 (338)
T ss_pred ---------------hhcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCC
Confidence 001122346788999999988889999999999999999996 9999987654444444443333
Q ss_pred CCCCCCCCCHHHHHHHHHccccCcCccCCChh
Q 001847 919 KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 950 (1005)
Q Consensus 919 ~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~ 950 (1005)
........+..+.+|+.+||+.||.+||++.+
T Consensus 295 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~e 326 (338)
T cd05102 295 RMRAPENATPEIYRIMLACWQGDPKERPTFSA 326 (338)
T ss_pred CCCCCCCCCHHHHHHHHHHccCChhhCcCHHH
Confidence 33333457888999999999999999999443
No 126
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=2.7e-37 Score=351.82 Aligned_cols=255 Identities=27% Similarity=0.430 Sum_probs=209.4
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC------
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 744 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------ 744 (1005)
.++|++++.||.|+||.||+|.+..+++.||+|.+.... ........+.+|+.+++.++||||++++++|...
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07878 14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPF-QSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF 92 (343)
T ss_pred hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchh-hhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence 368999999999999999999999999999999987542 2223445677899999999999999999887543
Q ss_pred CeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCccc
Q 001847 745 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 824 (1005)
Q Consensus 745 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~ 824 (1005)
...|++|+++ +++|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 93 ~~~~~~~~~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~ 168 (343)
T cd07878 93 NEVYLVTNLM-GADLNNIVKC---QKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQA 168 (343)
T ss_pred CcEEEEeecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceec
Confidence 4579999998 8899888754 34999999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001847 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRG 903 (1005)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlGvll~eLltG~~Pf~~ 903 (1005)
.. ......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+
T Consensus 169 ~~------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 218 (343)
T cd07878 169 DD------------------------------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPG 218 (343)
T ss_pred CC------------------------------CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence 21 1123468999999999877 4678899999999999999999999987
Q ss_pred CChHHHHHHHHhCCC----------------------C-CCC------CCCCCHHHHHHHHHccccCcCccCCChhcHHH
Q 001847 904 KTRQKTFANILHKDL----------------------K-FPS------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 954 (1005)
Q Consensus 904 ~~~~~~~~~i~~~~~----------------------~-~~~------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~e 954 (1005)
.+....+..+..... + .+. ....+..+.+||.+||..||.+||| +.+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s----~~e 294 (343)
T cd07878 219 NDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRIS----ASE 294 (343)
T ss_pred CCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCC----HHH
Confidence 766554444432100 0 000 0124556889999999999999999 999
Q ss_pred HHcCCCCCCC
Q 001847 955 IKKHPFFKGV 964 (1005)
Q Consensus 955 lL~hpff~~~ 964 (1005)
+|+||||...
T Consensus 295 ll~hp~~~~~ 304 (343)
T cd07878 295 ALAHPYFSQY 304 (343)
T ss_pred HhcCcchhcc
Confidence 9999999874
No 127
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=1.7e-36 Score=329.55 Aligned_cols=256 Identities=28% Similarity=0.445 Sum_probs=221.3
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 752 (1005)
+|.+.+.||+|++|.||++.+..+++.|++|.+..... .......+.+|+.+++.++||||+++++++...+..|+|||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKM-NRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVME 79 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhC-CHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEE
Confidence 47888999999999999999999999999999875432 34456778899999999999999999999999999999999
Q ss_pred ccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001847 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (1005)
Q Consensus 753 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 832 (1005)
|+++++|.+++.......++...+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++.......
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~---- 155 (256)
T cd08529 80 YAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT---- 155 (256)
T ss_pred eCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCcc----
Confidence 9999999999987545679999999999999999999999999999999999999999999999999875432110
Q ss_pred CcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001847 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 912 (1005)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~~ 912 (1005)
.......|++.|+|||++.+..++.++|||||||++|+|++|+.||...+.......
T Consensus 156 -----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~ 212 (256)
T cd08529 156 -----------------------NFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILK 212 (256)
T ss_pred -----------------------chhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 111234688999999999888889999999999999999999999988887776776
Q ss_pred HHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCC
Q 001847 913 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 961 (1005)
Q Consensus 913 i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff 961 (1005)
+..+...... ..++..+.++|.+||+.+|++||+ +.++++|||+
T Consensus 213 ~~~~~~~~~~-~~~~~~~~~~i~~~l~~~p~~Rp~----~~~ll~~~~~ 256 (256)
T cd08529 213 IIRGVFPPVS-QMYSQQLAQLIDQCLTKDYRQRPD----TFQLLRNPSL 256 (256)
T ss_pred HHcCCCCCCc-cccCHHHHHHHHHHccCCcccCcC----HHHHhhCCCC
Confidence 6665433222 256788999999999999999999 9999999996
No 128
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=2e-36 Score=329.37 Aligned_cols=256 Identities=25% Similarity=0.445 Sum_probs=217.7
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEe-CCeEEEEE
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT-KTHVCLIT 751 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~~lV~ 751 (1005)
+|++++.||.|++|.||++.+..+++.+|+|.+..... .......+.+|+.++++++|+|++++++.+.. ...+|++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~ 79 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNA-SRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVM 79 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhc-CHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEe
Confidence 58999999999999999999999999999999875422 33445667889999999999999999998864 45689999
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 831 (1005)
||+++++|.+++.......+++.++..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++.......
T Consensus 80 e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~--- 156 (257)
T cd08223 80 GFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC--- 156 (257)
T ss_pred cccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccC---
Confidence 99999999999976555668999999999999999999999999999999999999999999999999985432110
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001847 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 911 (1005)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~ 911 (1005)
.......|++.|+|||++.+..++.++|||||||++|+|++|+.||.+.+......
T Consensus 157 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~ 212 (257)
T cd08223 157 ------------------------DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVY 212 (257)
T ss_pred ------------------------CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence 11223468899999999998888999999999999999999999998877666666
Q ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCC
Q 001847 912 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 961 (1005)
Q Consensus 912 ~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff 961 (1005)
.+..+.... .....+..+.+|+.+||+.+|++||+ +.++++||||
T Consensus 213 ~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~~l~~~~~ 257 (257)
T cd08223 213 RIIEGKLPP-MPKDYSPELGELIATMLSKRPEKRPS----VKSILRQPYI 257 (257)
T ss_pred HHHhcCCCC-CccccCHHHHHHHHHHhccCcccCCC----HHHHhcCCCC
Confidence 665554422 22347789999999999999999999 9999999997
No 129
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=1.3e-36 Score=332.10 Aligned_cols=258 Identities=41% Similarity=0.746 Sum_probs=220.2
Q ss_pred ccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCCch
Q 001847 680 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 759 (1005)
Q Consensus 680 LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ggsL 759 (1005)
||.|++|.||+|.+..+++.|++|.+.+...........+.+|+.+++.++||||+++++++..+..+|+||||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 69999999999999888999999999876544455667889999999999999999999999999999999999999999
Q ss_pred hhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhh
Q 001847 760 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 839 (1005)
Q Consensus 760 ~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~ 839 (1005)
.+++... ..++...+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 81 ~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~----------- 147 (262)
T cd05572 81 WTILRDR--GLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ----------- 147 (262)
T ss_pred HHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc-----------
Confidence 9999764 348999999999999999999999999999999999999999999999999885432110
Q ss_pred hcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC--hHHHHHHHHhCC
Q 001847 840 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT--RQKTFANILHKD 917 (1005)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~--~~~~~~~i~~~~ 917 (1005)
......|++.|++||.+....++.++|+||||+++|+|++|..||.... ....+..+..+.
T Consensus 148 -----------------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 210 (262)
T cd05572 148 -----------------KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGN 210 (262)
T ss_pred -----------------ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccC
Confidence 1123468889999999988888999999999999999999999998776 566666666433
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCccCCCh-hcHHHHHcCCCCCCCChh
Q 001847 918 LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWA 967 (1005)
Q Consensus 918 ~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~hpff~~~~~~ 967 (1005)
.........+..+.+||.+||..+|++||++. ..++++++||||++++|.
T Consensus 211 ~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~ 261 (262)
T cd05572 211 GKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGFDWE 261 (262)
T ss_pred CCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCCCCC
Confidence 23332333478899999999999999999843 458999999999999885
No 130
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=1.2e-36 Score=344.21 Aligned_cols=265 Identities=21% Similarity=0.352 Sum_probs=209.3
Q ss_pred cccccccc--CcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEec
Q 001847 676 PIKPLGSG--DTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 753 (1005)
Q Consensus 676 ~~~~LG~G--~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~ 753 (1005)
+++.||+| +|++||++.+..+|+.||+|.+..... .......+.+|+.+++.++||||++++++|..++..|+||||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 80 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEAC-TNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSF 80 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhc-cHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEec
Confidence 56789999 789999999999999999999876432 233445677899999999999999999999999999999999
Q ss_pred cCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCC
Q 001847 754 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 833 (1005)
Q Consensus 754 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~ 833 (1005)
+++++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++.++++||+............
T Consensus 81 ~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~-- 158 (327)
T cd08227 81 MAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRL-- 158 (327)
T ss_pred cCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhccccccccc--
Confidence 999999999976544568999999999999999999999999999999999999999999999998653321100000
Q ss_pred cchhhhhcccCCCCCcccccccccccccccCCcccccccccC--CCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001847 834 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 911 (1005)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~ 911 (1005)
...........++..|+|||++.+ ..++.++|||||||++|+|++|+.||..........
T Consensus 159 ------------------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~ 220 (327)
T cd08227 159 ------------------RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLL 220 (327)
T ss_pred ------------------cccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHH
Confidence 000001122357788999999876 457889999999999999999999998655444333
Q ss_pred HHHhCCCCC--------------------------------------------CCCCCCCHHHHHHHHHccccCcCccCC
Q 001847 912 NILHKDLKF--------------------------------------------PSSTPTSLHAKQLMYRLLHRDPKSRLG 947 (1005)
Q Consensus 912 ~i~~~~~~~--------------------------------------------~~~~~~s~~l~~Ll~~~L~~dP~~Rpt 947 (1005)
.......+. +.....+..+.+||.+||+.||++|||
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt 300 (327)
T cd08227 221 EKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPS 300 (327)
T ss_pred HHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCC
Confidence 332221110 001124567899999999999999999
Q ss_pred ChhcHHHHHcCCCCCCCC
Q 001847 948 SHEGANEIKKHPFFKGVN 965 (1005)
Q Consensus 948 ~~~~a~elL~hpff~~~~ 965 (1005)
+.++++||||+.+.
T Consensus 301 ----~~ell~~p~f~~~~ 314 (327)
T cd08227 301 ----ASTLLNHSFFKQIK 314 (327)
T ss_pred ----HHHHhcChhhhhcc
Confidence 99999999999764
No 131
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-37 Score=320.66 Aligned_cols=265 Identities=30% Similarity=0.482 Sum_probs=222.4
Q ss_pred cccc-ccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEEEEE
Q 001847 674 FRPI-KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 674 y~~~-~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
|++. +.||+|+++.|-.+....+|+.||||++.+. ......++++|.+++.++ .|+||++++++|+++..+|+||
T Consensus 79 YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq---~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVf 155 (463)
T KOG0607|consen 79 YKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ---PGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVF 155 (463)
T ss_pred HHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcC---CchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEE
Confidence 4443 5699999999999999999999999999875 456678999999999999 7999999999999999999999
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCC---cEEEEeccCCcccCCCC
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG---HVSLTDFDLSCLTSCKP 828 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g---~vkL~DFG~a~~~~~~~ 828 (1005)
|.|.||+|...+.++ ..+++..+..+.++|+.||.|||.+||.||||||+|||-.+.+ -+|||||.+..-+....
T Consensus 156 EKm~GGplLshI~~~--~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~ 233 (463)
T KOG0607|consen 156 EKMRGGPLLSHIQKR--KHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNN 233 (463)
T ss_pred ecccCchHHHHHHHh--hhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCC
Confidence 999999999999875 4599999999999999999999999999999999999998654 48999999874322111
Q ss_pred CCCCCcchhhhhcccCCCCCcccccccccccccccCCccccccccc-----CCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001847 829 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYTPFRG 903 (1005)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~-----~~~~~~~sDIwSlGvll~eLltG~~Pf~~ 903 (1005)
... +.....-.+.+|+..|||||+.. ...|+.++|.||||++||-|++|.+||.|
T Consensus 234 ~~s--------------------pastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG 293 (463)
T KOG0607|consen 234 DCS--------------------PASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVG 293 (463)
T ss_pred CCC--------------------CCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccC
Confidence 111 11112234568999999999862 24578899999999999999999999976
Q ss_pred CC---------------hHHHHHHHHhCCCCCCC--CCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCCh
Q 001847 904 KT---------------RQKTFANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 966 (1005)
Q Consensus 904 ~~---------------~~~~~~~i~~~~~~~~~--~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~~ 966 (1005)
.. ....+..|..+...+|. +..+|.++++|+..+|..++.+|.+ +.++++|||++.+-.
T Consensus 294 ~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rls----a~~vlnhPw~~~~~~ 369 (463)
T KOG0607|consen 294 HCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLS----AAQVLNHPWVQRCAP 369 (463)
T ss_pred ccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhh----hhhccCCccccccch
Confidence 32 23667788888887775 4568899999999999999999999 999999999998644
Q ss_pred h
Q 001847 967 A 967 (1005)
Q Consensus 967 ~ 967 (1005)
+
T Consensus 370 e 370 (463)
T KOG0607|consen 370 E 370 (463)
T ss_pred h
Confidence 4
No 132
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=1.5e-36 Score=339.03 Aligned_cols=261 Identities=25% Similarity=0.412 Sum_probs=213.6
Q ss_pred ccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 001847 670 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 749 (1005)
Q Consensus 670 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 749 (1005)
..++|++++.||.|+||.||++.+..+++.||+|.+..... ......+.+|+.+++.++||||+++++++...+..|+
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~l 81 (301)
T cd07873 4 KLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHE--EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTL 81 (301)
T ss_pred cccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccc--cCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEE
Confidence 35689999999999999999999999999999999875422 2223456789999999999999999999999999999
Q ss_pred EEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 001847 750 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 829 (1005)
Q Consensus 750 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~ 829 (1005)
||||+. ++|.+++... ...+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||++.......
T Consensus 82 v~e~~~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~- 158 (301)
T cd07873 82 VFEYLD-KDLKQYLDDC-GNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT- 158 (301)
T ss_pred EEeccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCC-
Confidence 999995 6898888654 2458899999999999999999999999999999999999999999999999885422110
Q ss_pred CCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001847 830 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 908 (1005)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~ 908 (1005)
.......+++.|+|||++.+. .++.++|||||||++|+|++|++||.+.+..+
T Consensus 159 --------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~ 212 (301)
T cd07873 159 --------------------------KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEE 212 (301)
T ss_pred --------------------------CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 111233578899999998654 46789999999999999999999998877655
Q ss_pred HHHHHHhCC-------------------CCCCC---------CCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCC
Q 001847 909 TFANILHKD-------------------LKFPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 960 (1005)
Q Consensus 909 ~~~~i~~~~-------------------~~~~~---------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpf 960 (1005)
....+.... ..++. ...++..+.+||.+||+.||.+||| +.++|+|||
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t----~~eil~h~~ 288 (301)
T cd07873 213 QLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRIS----AEEAMKHPY 288 (301)
T ss_pred HHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcC----HHHHhcCcc
Confidence 544433210 01111 1235778899999999999999999 999999999
Q ss_pred CCCCC
Q 001847 961 FKGVN 965 (1005)
Q Consensus 961 f~~~~ 965 (1005)
|+.+.
T Consensus 289 f~~~~ 293 (301)
T cd07873 289 FHCLG 293 (301)
T ss_pred ccccc
Confidence 98764
No 133
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=2.6e-36 Score=332.17 Aligned_cols=258 Identities=30% Similarity=0.470 Sum_probs=221.2
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
++|++.+.||.|++|.||++.+..++..+++|.+.... .......+.+|+.+++.++|+||+++++++.....+|+|+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE--AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIM 78 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc--cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEE
Confidence 47999999999999999999999999999999987542 2334566788999999999999999999999999999999
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 831 (1005)
||+.+++|.+++... .+++..++.++.||+.||.|||+.+++|+||+|+||++++++.++|+|||++.......
T Consensus 79 e~~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~--- 152 (274)
T cd06609 79 EYCGGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM--- 152 (274)
T ss_pred EeeCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecccc---
Confidence 999999999998763 58999999999999999999999999999999999999999999999999985543110
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001847 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 911 (1005)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~ 911 (1005)
.......+++.|+|||++.+..++.++|||||||++|+|++|..||...+......
T Consensus 153 ------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~ 208 (274)
T cd06609 153 ------------------------SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLF 208 (274)
T ss_pred ------------------------cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHH
Confidence 11223468889999999988889999999999999999999999998777666555
Q ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCC
Q 001847 912 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 965 (1005)
Q Consensus 912 ~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~ 965 (1005)
.+.....+......++..+.+++.+||..+|++||+ ++++++||||+...
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt----~~~il~~~~~~~~~ 258 (274)
T cd06609 209 LIPKNNPPSLEGNKFSKPFKDFVSLCLNKDPKERPS----AKELLKHKFIKKAK 258 (274)
T ss_pred HhhhcCCCCCcccccCHHHHHHHHHHhhCChhhCcC----HHHHhhChhhcCCC
Confidence 555543333232336788999999999999999999 99999999999753
No 134
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=4.6e-37 Score=334.60 Aligned_cols=254 Identities=38% Similarity=0.627 Sum_probs=210.8
Q ss_pred ccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEec
Q 001847 674 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 753 (1005)
Q Consensus 674 y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~ 753 (1005)
|++++.||+|+||+||++.+..+++.||+|++...... ........+|+.+++.++||||+++++++......++||||
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~-~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~ 79 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIE-EEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEY 79 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHH-HHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEecccccc-ccccchhhhhhhccccccccccccccccccccccccccccc
Confidence 78999999999999999999999999999999876322 22223345599999999999999999999999999999999
Q ss_pred cCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCC
Q 001847 754 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 833 (1005)
Q Consensus 754 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~ 833 (1005)
+.+++|.+++... ..++...+..++.||+.||.+||++|++|+||||+||+++.++.++|+|||.+.....
T Consensus 80 ~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~------- 150 (260)
T PF00069_consen 80 CPGGSLQDYLQKN--KPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSE------- 150 (260)
T ss_dssp ETTEBHHHHHHHH--SSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEESTS-------
T ss_pred ccccccccccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-------
Confidence 9999999999843 4589999999999999999999999999999999999999999999999999854210
Q ss_pred cchhhhhcccCCCCCcccccccccccccccCCccccccccc-CCCCCChhhHHHHHHHHHHHHcCCCCCCCCC---hHHH
Q 001847 834 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-GAGHTSAVDWWALGILLYEMLYGYTPFRGKT---RQKT 909 (1005)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~---~~~~ 909 (1005)
.........+++.|+|||++. +...+.++||||||+++|+|++|..||.... ....
T Consensus 151 --------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~ 210 (260)
T PF00069_consen 151 --------------------NNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEI 210 (260)
T ss_dssp --------------------TTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHH
T ss_pred --------------------cccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhh
Confidence 011223457899999999998 7888999999999999999999999998873 3333
Q ss_pred HHHHHhCCCCCCC--CCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCC
Q 001847 910 FANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 961 (1005)
Q Consensus 910 ~~~i~~~~~~~~~--~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff 961 (1005)
+............ ....+..+.++|.+||+.||++||+ +.++++||||
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~----~~~l~~~~~~ 260 (260)
T PF00069_consen 211 IEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPS----AEELLKHPWF 260 (260)
T ss_dssp HHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTT----HHHHHTSGGG
T ss_pred hhhcccccccccccccchhHHHHHHHHHHHccCChhHCcC----HHHHhcCCCC
Confidence 3333332211111 1112478999999999999999999 9999999998
No 135
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=3.3e-36 Score=332.55 Aligned_cols=252 Identities=26% Similarity=0.426 Sum_probs=209.6
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 752 (1005)
+|++++.||+|+||.||++.+..+++.||+|.+.... .......+.+|+.++++++||||+++++++...+..++|||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 79 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI--TVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTE 79 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC--ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEe
Confidence 6889999999999999999999999999999987542 23344678889999999999999999999999999999999
Q ss_pred ccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001847 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (1005)
Q Consensus 753 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 832 (1005)
|+++++|..+. .+++..+..++.||+.||.|||+.||+|+||||+|||++.++.++|+|||++......
T Consensus 80 ~~~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~----- 148 (279)
T cd06619 80 FMDGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS----- 148 (279)
T ss_pred cCCCCChHHhh------cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccc-----
Confidence 99999986542 3788899999999999999999999999999999999999999999999988543210
Q ss_pred CcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCh------
Q 001847 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR------ 906 (1005)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~------ 906 (1005)
......|++.|+|||++.+..++.++|+|||||++|+|++|..||.....
T Consensus 149 ------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~ 204 (279)
T cd06619 149 ------------------------IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLM 204 (279)
T ss_pred ------------------------cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccc
Confidence 11235789999999999988899999999999999999999999965321
Q ss_pred -HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCC
Q 001847 907 -QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 965 (1005)
Q Consensus 907 -~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~ 965 (1005)
......+.............+..+.+|+.+||+.+|.+||+ +.++++||||...+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~----~~eil~~~~~~~~~ 260 (279)
T cd06619 205 PLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPA----PENLMDHPFIVQYN 260 (279)
T ss_pred hHHHHHHHhccCCCCCCCCcCCHHHHHHHHHHhhCChhhCCC----HHHHhcCccccccc
Confidence 12222222222222222346778999999999999999999 99999999998753
No 136
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=2.5e-36 Score=331.73 Aligned_cols=255 Identities=27% Similarity=0.413 Sum_probs=212.3
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeC------
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTK------ 744 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~------ 744 (1005)
+.|++.+.||.|+||.||++.+..+++.+|+|.+.... .....+.+|+.+++++ +|+||++++++|...
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 6 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred hhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC----ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 57999999999999999999999999999999986532 2235677899999998 799999999998752
Q ss_pred CeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCccc
Q 001847 745 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 824 (1005)
Q Consensus 745 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~ 824 (1005)
..+|+||||+.+++|.+++.......+++..+..++.|++.||+|||+++|+|+||||+||+++.++.++|+|||++...
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~ 161 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 161 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCceec
Confidence 46899999999999999998755556899999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCccccccccc-----CCCCCChhhHHHHHHHHHHHHcCCC
Q 001847 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYT 899 (1005)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~-----~~~~~~~sDIwSlGvll~eLltG~~ 899 (1005)
... ........|++.|+|||++. ...++.++|||||||++|+|++|..
T Consensus 162 ~~~---------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~ 214 (272)
T cd06637 162 DRT---------------------------VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAP 214 (272)
T ss_pred ccc---------------------------cccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCC
Confidence 210 01123456899999999986 3357779999999999999999999
Q ss_pred CCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCC
Q 001847 900 PFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 961 (1005)
Q Consensus 900 Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff 961 (1005)
||...........+.............+..+.+|+.+||..+|.+||+ +.++++||||
T Consensus 215 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~il~~~~~ 272 (272)
T cd06637 215 PLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPT----TEQLMKHPFI 272 (272)
T ss_pred CccccCHHHHHHHHhcCCCCCCCCCCcCHHHHHHHHHHcCCChhhCCC----HHHHhhCCCC
Confidence 998766555554444433333333456789999999999999999999 9999999998
No 137
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=2.4e-36 Score=333.60 Aligned_cols=259 Identities=27% Similarity=0.461 Sum_probs=220.2
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
++|++++.||.|++|.||++.+..++..+|+|.+... .......+..|++++++++||||+++++++.....+|+||
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE---SEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILI 81 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC---CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEe
Confidence 5799999999999999999999889999999998643 4455667888999999999999999999999999999999
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 831 (1005)
||+++++|..++... ...+++..++.++.|++.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 82 e~~~~~~L~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~---- 156 (280)
T cd06611 82 EFCDGGALDSIMLEL-ERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKST---- 156 (280)
T ss_pred eccCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhccc----
Confidence 999999999998753 245899999999999999999999999999999999999999999999999987442210
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-----CCCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001847 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLYGYTPFRGKTR 906 (1005)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-----~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~ 906 (1005)
........|++.|+|||.+.. ..++.++|||||||++|+|++|+.||.+...
T Consensus 157 -----------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~ 213 (280)
T cd06611 157 -----------------------LQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNP 213 (280)
T ss_pred -----------------------ccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCH
Confidence 011223468999999999752 3466789999999999999999999988877
Q ss_pred HHHHHHHHhCCCC-CCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCC
Q 001847 907 QKTFANILHKDLK-FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 965 (1005)
Q Consensus 907 ~~~~~~i~~~~~~-~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~ 965 (1005)
...+..+.....+ +......+..+.+||.+||..+|.+||+ +.++++||||....
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~il~~~~~~~~~ 269 (280)
T cd06611 214 MRVLLKILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPT----AAELLKHPFVSDQS 269 (280)
T ss_pred HHHHHHHhcCCCCCcCCcccCCHHHHHHHHHHhccChhhCcC----HHHHhcChhhcccc
Confidence 6666666655332 2233456789999999999999999999 99999999999864
No 138
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=2.6e-36 Score=333.93 Aligned_cols=256 Identities=25% Similarity=0.406 Sum_probs=208.8
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 752 (1005)
+|++++.||+|++|.||++.+..++..||+|.++.... .......+.+|+.++++++||||+++++++..++..|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESE-EEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFE 79 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccc-cCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEe
Confidence 48899999999999999999999999999999875422 22334567789999999999999999999999999999999
Q ss_pred ccCCCchhhHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001847 753 YCPGGELFLLLDRQP-TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (1005)
Q Consensus 753 ~~~ggsL~~~l~~~~-~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 831 (1005)
|+. ++|.+++.... ...+++..++.++.||+.||.|||++|++|+||||+||+++.+|.++|+|||++.......
T Consensus 80 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~--- 155 (285)
T cd07861 80 FLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV--- 155 (285)
T ss_pred cCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCc---
Confidence 995 68888876533 2568999999999999999999999999999999999999999999999999985432110
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001847 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 910 (1005)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~ 910 (1005)
.......+++.|+|||++.+. .++.++|||||||++|+|++|+.||.+.......
T Consensus 156 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~ 211 (285)
T cd07861 156 ------------------------RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQL 211 (285)
T ss_pred ------------------------ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
Confidence 111233578899999998654 4688999999999999999999999877654443
Q ss_pred HHHHhCCC------------------CC---------CCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCC
Q 001847 911 ANILHKDL------------------KF---------PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 961 (1005)
Q Consensus 911 ~~i~~~~~------------------~~---------~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff 961 (1005)
..+..... .. .....++.++.+||.+||..||.+||| +.+++.||||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt----~~~ll~~~~~ 285 (285)
T cd07861 212 FRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRIS----AKKALNHPYF 285 (285)
T ss_pred HHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCC----HHHHhcCCCC
Confidence 33221100 00 011236788899999999999999999 9999999998
No 139
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=4.5e-36 Score=331.61 Aligned_cols=260 Identities=35% Similarity=0.639 Sum_probs=205.5
Q ss_pred cccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHH---hCCCCCcceEEEEEEeCCeEEEEEeccC
Q 001847 679 PLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILD---MLDHPFVPALYASFQTKTHVCLITDYCP 755 (1005)
Q Consensus 679 ~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~---~l~hpnIv~l~~~~~~~~~~~lV~E~~~ 755 (1005)
.||+|+||.||++.+..+++.+|+|.+.+.............++..+++ ..+||||+.+++++...+..|+||||+.
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999999999999999987654333322233344444443 3479999999999999999999999999
Q ss_pred CCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcc
Q 001847 756 GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT 835 (1005)
Q Consensus 756 ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~ 835 (1005)
+++|.+++..+ +.+++..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||++......
T Consensus 81 ~~~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~-------- 150 (279)
T cd05633 81 GGDLHYHLSQH--GVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK-------- 150 (279)
T ss_pred CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceecccc--------
Confidence 99999988764 45999999999999999999999999999999999999999999999999988432210
Q ss_pred hhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCCh--HHHHHH
Q 001847 836 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTR--QKTFAN 912 (1005)
Q Consensus 836 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~--~~~~~~ 912 (1005)
......|++.|+|||.+.. ..++.++|||||||++|+|++|..||.+... ......
T Consensus 151 ---------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~ 209 (279)
T cd05633 151 ---------------------KPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR 209 (279)
T ss_pred ---------------------CccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHH
Confidence 0112368999999999864 5678899999999999999999999975432 122222
Q ss_pred HHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCCh-hcHHHHHcCCCCCCCChhhhh
Q 001847 913 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVR 970 (1005)
Q Consensus 913 i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~hpff~~~~~~~~~ 970 (1005)
.. ...........+..+.+||.+||..||.+|++.. ..++++++||||++++|....
T Consensus 210 ~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~~~~~~ 267 (279)
T cd05633 210 MT-LTVNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGIDWQQVY 267 (279)
T ss_pred Hh-hcCCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCCHhHHh
Confidence 21 1112222334688999999999999999999311 228999999999999999874
No 140
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.8e-36 Score=369.86 Aligned_cols=264 Identities=25% Similarity=0.388 Sum_probs=217.1
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEe--CCe
Q 001847 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT--KTH 746 (1005)
Q Consensus 669 i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~~~ 746 (1005)
...++|++++.||.|+||.||+|.+..++..+|+|++..... .......+..|+.+++.++||||++++++|.. ...
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l-~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ 88 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGL-KEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQK 88 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEecccc-CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCE
Confidence 346799999999999999999999999999999999876532 33445678899999999999999999998854 457
Q ss_pred EEEEEeccCCCchhhHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHc-------CcccCCCCCCcEEEec--------
Q 001847 747 VCLITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQ-------GIIYRDLKPENVLLQG-------- 809 (1005)
Q Consensus 747 ~~lV~E~~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qil~aL~~LH~~-------gIvHrDLkP~NILi~~-------- 809 (1005)
+||||||+.+++|.+++... ....+++..++.|+.||+.||.|||+. +|||+||||+||||+.
T Consensus 89 lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i 168 (1021)
T PTZ00266 89 LYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKI 168 (1021)
T ss_pred EEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccc
Confidence 99999999999999998752 234699999999999999999999985 4999999999999964
Q ss_pred ---------CCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC--CCC
Q 001847 810 ---------NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGH 878 (1005)
Q Consensus 810 ---------~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~ 878 (1005)
.+.+||+|||++....... ......||+.|+|||++.+ ..+
T Consensus 169 ~~~~~n~ng~~iVKLsDFGlAr~l~~~s----------------------------~~~s~vGTp~YmAPEvL~ge~~~~ 220 (1021)
T PTZ00266 169 TAQANNLNGRPIAKIGDFGLSKNIGIES----------------------------MAHSCVGTPYYWSPELLLHETKSY 220 (1021)
T ss_pred cccccccCCCCceEEccCCccccccccc----------------------------cccccCCCccccCHHHHhccCCCC
Confidence 2358999999985432110 1123479999999999865 347
Q ss_pred CChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcC
Q 001847 879 TSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 958 (1005)
Q Consensus 879 ~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~h 958 (1005)
+.++|||||||+||+|++|..||........+...+.....++. ...+..+.+||..||..+|.+||+ +.++|.|
T Consensus 221 s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p~lpi-~~~S~eL~dLI~~~L~~dPeeRPS----a~QlL~h 295 (1021)
T PTZ00266 221 DDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGPDLPI-KGKSKELNILIKNLLNLSAKERPS----ALQCLGY 295 (1021)
T ss_pred CchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCCCCCc-CCCCHHHHHHHHHHhcCChhHCcC----HHHHhcc
Confidence 88999999999999999999999876665555455444333332 346789999999999999999999 9999999
Q ss_pred CCCCCCCh
Q 001847 959 PFFKGVNW 966 (1005)
Q Consensus 959 pff~~~~~ 966 (1005)
+||+.+..
T Consensus 296 ~~ik~i~~ 303 (1021)
T PTZ00266 296 QIIKNVGP 303 (1021)
T ss_pred HHHhhcCC
Confidence 99987644
No 141
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.6e-36 Score=351.59 Aligned_cols=262 Identities=25% Similarity=0.398 Sum_probs=211.7
Q ss_pred ccCCccccccccccCcEEEEEEEEc--CCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001847 670 NLQHFRPIKPLGSGDTGSVHLVELC--GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 747 (1005)
Q Consensus 670 ~~~~y~~~~~LG~G~~g~Vy~a~~~--~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 747 (1005)
...+|++++.||.|+||.||+|... .+++.+++|.+... ....+|+.+++.++||||++++++|.....+
T Consensus 90 ~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~--------~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~ 161 (392)
T PHA03207 90 VRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG--------KTPGREIDILKTISHRAIINLIHAYRWKSTV 161 (392)
T ss_pred ccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc--------ccHHHHHHHHHhcCCCCccceeeeEeeCCEE
Confidence 3468999999999999999999864 34678999987643 2345799999999999999999999999999
Q ss_pred EEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001847 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (1005)
Q Consensus 748 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 827 (1005)
|+|||++ +++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||++......
T Consensus 162 ~lv~e~~-~~~l~~~l~~~--~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~ 238 (392)
T PHA03207 162 CMVMPKY-KCDLFTYVDRS--GPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAH 238 (392)
T ss_pred EEEehhc-CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCcc
Confidence 9999999 57888888543 55999999999999999999999999999999999999999999999999998553311
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCh-
Q 001847 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR- 906 (1005)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~- 906 (1005)
.. ........||+.|+|||++....++.++|||||||++|+|++|+.||.+...
T Consensus 239 ~~-------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~ 293 (392)
T PHA03207 239 PD-------------------------TPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVK 293 (392)
T ss_pred cc-------------------------cccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCC
Confidence 10 0112245799999999999988899999999999999999999999976432
Q ss_pred --HHHHHHHHhC----CCC-------------------------CCC---CCCCCHHHHHHHHHccccCcCccCCChhcH
Q 001847 907 --QKTFANILHK----DLK-------------------------FPS---STPTSLHAKQLMYRLLHRDPKSRLGSHEGA 952 (1005)
Q Consensus 907 --~~~~~~i~~~----~~~-------------------------~~~---~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a 952 (1005)
...+..+.+. ... .+. ....+.++.+||.+||..||++||+ +
T Consensus 294 ~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rps----a 369 (392)
T PHA03207 294 SSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPS----A 369 (392)
T ss_pred CcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCC----H
Confidence 1222222210 000 000 0124567889999999999999999 9
Q ss_pred HHHHcCCCCCCCChhhhhh
Q 001847 953 NEIKKHPFFKGVNWALVRC 971 (1005)
Q Consensus 953 ~elL~hpff~~~~~~~~~~ 971 (1005)
.++|.||||+...|..++-
T Consensus 370 ~e~l~~p~f~~~~~~~~~~ 388 (392)
T PHA03207 370 QDILSLPLFTKEPINLLNI 388 (392)
T ss_pred HHHhhCchhhccchhhhcC
Confidence 9999999999988887643
No 142
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=2.1e-36 Score=329.95 Aligned_cols=265 Identities=45% Similarity=0.827 Sum_probs=225.0
Q ss_pred ccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCCch
Q 001847 680 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 759 (1005)
Q Consensus 680 LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ggsL 759 (1005)
||.|+||.||++.+..+++.+++|.+.............+.+|+.++++++|+||+++++.+...+..|+||||+.+++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 68999999999999888999999999765444455667888999999999999999999999999999999999999999
Q ss_pred hhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhh
Q 001847 760 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 839 (1005)
Q Consensus 760 ~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~ 839 (1005)
.+++.... .+++..+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++...........
T Consensus 81 ~~~l~~~~--~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~------- 151 (265)
T cd05579 81 ASLLENVG--SLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINL------- 151 (265)
T ss_pred HHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccc-------
Confidence 99997643 589999999999999999999999999999999999999999999999998854321111000
Q ss_pred hcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCC
Q 001847 840 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLK 919 (1005)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~~i~~~~~~ 919 (1005)
...........++..|++||.+.....+.++||||||+++|+|++|..||...........+..+...
T Consensus 152 ------------~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 219 (265)
T cd05579 152 ------------NDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIE 219 (265)
T ss_pred ------------ccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcC
Confidence 00011223456888999999998888889999999999999999999999988888777777776666
Q ss_pred CCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCCh
Q 001847 920 FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 966 (1005)
Q Consensus 920 ~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~~ 966 (1005)
++.....+..+.+|+.+||+.+|.+||++.. +.++|+||||+.++|
T Consensus 220 ~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~-~~~~l~~~~~~~~~~ 265 (265)
T cd05579 220 WPEDVEVSDEAIDLISKLLVPDPEKRLGAKS-IEEIKNHPFFKGIDW 265 (265)
T ss_pred CCccccCCHHHHHHHHHHhcCCHhhcCCCcc-HHHHhcCccccCCCC
Confidence 6665556889999999999999999999322 399999999999988
No 143
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-38 Score=316.28 Aligned_cols=266 Identities=24% Similarity=0.325 Sum_probs=216.1
Q ss_pred ccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEe----
Q 001847 668 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT---- 743 (1005)
Q Consensus 668 ~i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~---- 743 (1005)
.|+.++|++.+.||+|||+.||+|++..++..||+|.+... .....+...+|++..++++||||++++++...
T Consensus 17 ~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~---~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D 93 (302)
T KOG2345|consen 17 IINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCH---SQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKD 93 (302)
T ss_pred EEcCceEEEeeeecCCCceeeeeecccCcccchhhheeecc---chHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhcc
Confidence 36789999999999999999999999999999999998765 35667888999999999999999999876532
Q ss_pred -CCeEEEEEeccCCCchhhHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcC--cccCCCCCCcEEEecCCcEEEEec
Q 001847 744 -KTHVCLITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQGNGHVSLTDF 818 (1005)
Q Consensus 744 -~~~~~lV~E~~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qil~aL~~LH~~g--IvHrDLkP~NILi~~~g~vkL~DF 818 (1005)
....||+++|+..|+|.+.+... .+..+++.++..|+.+|++||.+||... .+||||||.|||+++++.++|.||
T Consensus 94 ~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~ 173 (302)
T KOG2345|consen 94 GKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDL 173 (302)
T ss_pred CceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEec
Confidence 34599999999999999998753 3446999999999999999999999998 999999999999999999999999
Q ss_pred cCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC---CCCChhhHHHHHHHHHHHH
Q 001847 819 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA---GHTSAVDWWALGILLYEML 895 (1005)
Q Consensus 819 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~---~~~~~sDIwSlGvll~eLl 895 (1005)
|.+......-... . .............|..|+|||.+.-. ..+.++|||||||+||.|+
T Consensus 174 GS~~~a~i~i~~~---~---------------~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~m 235 (302)
T KOG2345|consen 174 GSATQAPIQIEGS---R---------------QALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMM 235 (302)
T ss_pred cCccccceEeech---H---------------HHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHH
Confidence 9886543211100 0 00011112234678999999998543 4577999999999999999
Q ss_pred cCCCCCCCCCh--HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcC
Q 001847 896 YGYTPFRGKTR--QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 958 (1005)
Q Consensus 896 tG~~Pf~~~~~--~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~h 958 (1005)
+|..||..... ....-.+....+.+|...+++..+.+||++||+.||.+||+ +.+++.+
T Consensus 236 f~~sPfe~~~~~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~----i~~ll~~ 296 (302)
T KOG2345|consen 236 FGESPFERIYQQGGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPT----IPELLSK 296 (302)
T ss_pred HcCCcchHHhhcCCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCC----HHHHHHH
Confidence 99999953211 11222345567889998889999999999999999999999 7777653
No 144
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=3.8e-36 Score=328.10 Aligned_cols=256 Identities=43% Similarity=0.758 Sum_probs=214.6
Q ss_pred ccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHH-HhCCCCCcceEEEEEEeCCeEEEEEeccCC
Q 001847 678 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREIL-DMLDHPFVPALYASFQTKTHVCLITDYCPG 756 (1005)
Q Consensus 678 ~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il-~~l~hpnIv~l~~~~~~~~~~~lV~E~~~g 756 (1005)
+.||.|+||.||+|.+..+++.||+|.+.+...........+..|..++ ...+|+|++++++++...+.+|+||||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 5789999999999999999999999998764332233334445555444 445899999999999999999999999999
Q ss_pred CchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 001847 757 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 836 (1005)
Q Consensus 757 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 836 (1005)
++|.+++... ..+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++.....
T Consensus 82 ~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~---------- 149 (260)
T cd05611 82 GDCASLIKTL--GGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE---------- 149 (260)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccc----------
Confidence 9999999764 4589999999999999999999999999999999999999999999999998743210
Q ss_pred hhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhC
Q 001847 837 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 916 (1005)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~~i~~~ 916 (1005)
.....|++.|+|||.+.+..++.++||||||+++|+|++|..||...+.......+...
T Consensus 150 ---------------------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~ 208 (260)
T cd05611 150 ---------------------NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSR 208 (260)
T ss_pred ---------------------cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhc
Confidence 12345788999999998887889999999999999999999999988887777777666
Q ss_pred CCCCCCC--CCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCChh
Q 001847 917 DLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 967 (1005)
Q Consensus 917 ~~~~~~~--~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~~~ 967 (1005)
...++.. ..++..+.++|.+||..+|++||++.. +++++.||||+.++|.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~-~~~~l~~~~~~~~~~~ 260 (260)
T cd05611 209 RINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANG-YQEIKSHPFFKSINWD 260 (260)
T ss_pred ccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCc-HHHHHcChHhhcCCCC
Confidence 5544432 246889999999999999999997322 6899999999999884
No 145
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=4.9e-36 Score=336.26 Aligned_cols=256 Identities=27% Similarity=0.424 Sum_probs=212.6
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
++|++++.||+|+||.||++.+..++..+++|.+.... .......+.+|++++++++||||++++++|..++.+|+||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 78 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI--KPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICM 78 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEe
Confidence 36999999999999999999999999999999987532 3344567888999999999999999999999999999999
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~-~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 830 (1005)
||+++++|.+++... ..+++..+..++.||+.||.|||+ .+++|+||||+|||++.++.++|+|||++.....
T Consensus 79 ey~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~---- 152 (308)
T cd06615 79 EHMDGGSLDQVLKKA--GRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---- 152 (308)
T ss_pred eccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCcccccc----
Confidence 999999999999764 458999999999999999999997 5999999999999999999999999998743210
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001847 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 910 (1005)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~ 910 (1005)
.......|++.|+|||++.+..++.++|||||||++|+|++|..||...+.....
T Consensus 153 -------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~ 207 (308)
T cd06615 153 -------------------------SMANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELE 207 (308)
T ss_pred -------------------------cccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHH
Confidence 0112357899999999998888889999999999999999999999765543322
Q ss_pred HHHHhC------------------------------------CCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHH
Q 001847 911 ANILHK------------------------------------DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 954 (1005)
Q Consensus 911 ~~i~~~------------------------------------~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~e 954 (1005)
..+... ..+......++.++.+|+.+||..+|++||+ +.+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~~ 283 (308)
T cd06615 208 AMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERAD----LKE 283 (308)
T ss_pred HhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcC----HHH
Confidence 211110 0000001125678999999999999999999 999
Q ss_pred HHcCCCCCCC
Q 001847 955 IKKHPFFKGV 964 (1005)
Q Consensus 955 lL~hpff~~~ 964 (1005)
+++||||.+.
T Consensus 284 ll~~~~~~~~ 293 (308)
T cd06615 284 LTKHPFIKRA 293 (308)
T ss_pred HhcChhhhhc
Confidence 9999999863
No 146
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-37 Score=318.25 Aligned_cols=253 Identities=27% Similarity=0.446 Sum_probs=213.3
Q ss_pred cCCcccc-ccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceEEEEEEe----C
Q 001847 671 LQHFRPI-KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQT----K 744 (1005)
Q Consensus 671 ~~~y~~~-~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~----~ 744 (1005)
.++|.+- ++||-|-.|.|-.|.++.|+..+|+|++... .+..+|.++--.. .|||||.++++|.+ .
T Consensus 60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds--------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~r 131 (400)
T KOG0604|consen 60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS--------PKARREVELHWMASGHPHIVSIIDVYENSYQGR 131 (400)
T ss_pred hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC--------HHHHhHhhhhhhhcCCCceEEeehhhhhhccCc
Confidence 3566665 5699999999999999999999999987532 3445677664444 79999999999875 4
Q ss_pred CeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEec---CCcEEEEeccCC
Q 001847 745 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---NGHVSLTDFDLS 821 (1005)
Q Consensus 745 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~---~g~vkL~DFG~a 821 (1005)
..+.+|||.|+||.|++.++.+....+++..+..|++||..|+.|||+.+|.||||||+|+|++. |..+||+|||+|
T Consensus 132 kcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFA 211 (400)
T KOG0604|consen 132 KCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFA 211 (400)
T ss_pred eeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccc
Confidence 57889999999999999999888888999999999999999999999999999999999999985 457999999999
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCC
Q 001847 822 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 901 (1005)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf 901 (1005)
+..... ..-.+.|-||+|.|||++-...|+..+|+||+||++|-|++|.+||
T Consensus 212 K~t~~~----------------------------~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPF 263 (400)
T KOG0604|consen 212 KETQEP----------------------------GDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 263 (400)
T ss_pred cccCCC----------------------------ccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcc
Confidence 653211 1223568899999999999999999999999999999999999999
Q ss_pred CCCCh----HHHHHHHHhCCCCCC--CCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCC
Q 001847 902 RGKTR----QKTFANILHKDLKFP--SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 963 (1005)
Q Consensus 902 ~~~~~----~~~~~~i~~~~~~~~--~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~ 963 (1005)
..... .....+|..+...+| ++...|..++++|+++|..+|.+|+| +.+++.|||+.+
T Consensus 264 YS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlT----I~~~m~hpwi~~ 327 (400)
T KOG0604|consen 264 YSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLT----IEEVMDHPWINQ 327 (400)
T ss_pred cccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhhee----HHHhhcCchhcc
Confidence 75433 234455665655554 55778999999999999999999999 999999999996
No 147
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3e-36 Score=352.85 Aligned_cols=254 Identities=26% Similarity=0.376 Sum_probs=204.3
Q ss_pred ccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 001847 670 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 749 (1005)
Q Consensus 670 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 749 (1005)
...+|.+.+.||.|+||.||++.+..+++.||||.... ..+.+|+.++++++|+||+++++++...+..|+
T Consensus 167 ~~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~---------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~l 237 (461)
T PHA03211 167 AGLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY---------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCL 237 (461)
T ss_pred ccCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc---------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEE
Confidence 35689999999999999999999999999999996432 235679999999999999999999999999999
Q ss_pred EEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 001847 750 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 829 (1005)
Q Consensus 750 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~ 829 (1005)
|||++ .++|..++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++........
T Consensus 238 v~e~~-~~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~ 315 (461)
T PHA03211 238 VLPKY-RSDLYTYLGARL-RPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWS 315 (461)
T ss_pred EEEcc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccc
Confidence 99999 578888886542 3599999999999999999999999999999999999999999999999999865321100
Q ss_pred CCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCh---
Q 001847 830 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR--- 906 (1005)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~--- 906 (1005)
........||+.|+|||++.+..++.++|||||||++|+|++|..|+.....
T Consensus 316 -------------------------~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~ 370 (461)
T PHA03211 316 -------------------------TPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDE 370 (461)
T ss_pred -------------------------cccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccc
Confidence 0011235799999999999998999999999999999999998765533211
Q ss_pred ----HHHHHHHHh-CCCC---C-----------------------------CCCCCCCHHHHHHHHHccccCcCccCCCh
Q 001847 907 ----QKTFANILH-KDLK---F-----------------------------PSSTPTSLHAKQLMYRLLHRDPKSRLGSH 949 (1005)
Q Consensus 907 ----~~~~~~i~~-~~~~---~-----------------------------~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~ 949 (1005)
...+.+++. .... + ......+..+.+||.+||+.||.+|||
T Consensus 371 ~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPs-- 448 (461)
T PHA03211 371 RRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPS-- 448 (461)
T ss_pred cCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcC--
Confidence 112222221 1110 0 111124557889999999999999999
Q ss_pred hcHHHHHcCCCCCC
Q 001847 950 EGANEIKKHPFFKG 963 (1005)
Q Consensus 950 ~~a~elL~hpff~~ 963 (1005)
+.++|+||||+.
T Consensus 449 --a~elL~hp~f~~ 460 (461)
T PHA03211 449 --AAELLRLPLFQS 460 (461)
T ss_pred --HHHHhhCcccCC
Confidence 999999999975
No 148
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=7.1e-36 Score=330.24 Aligned_cols=257 Identities=26% Similarity=0.431 Sum_probs=216.4
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 752 (1005)
-|++.+.||.|+||.||++.+..++..+++|.+... .......+.+|+++++.++||||+++++++...+..|+|||
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e 82 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK---SEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIE 82 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCC---CHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEE
Confidence 378899999999999999999999999999998643 33455678889999999999999999999999999999999
Q ss_pred ccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001847 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (1005)
Q Consensus 753 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 832 (1005)
|+.+++|..++... ...+++..+..++.||+.||.|||+.|++|+||||+||+++.++.++|+|||++......
T Consensus 83 ~~~~~~l~~~~~~~-~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~----- 156 (282)
T cd06643 83 FCAGGAVDAVMLEL-ERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT----- 156 (282)
T ss_pred ecCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEcccccccccccc-----
Confidence 99999998887643 245899999999999999999999999999999999999999999999999988542210
Q ss_pred CcchhhhhcccCCCCCcccccccccccccccCCccccccccc-----CCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001847 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 907 (1005)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~-----~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~ 907 (1005)
........+++.|+|||++. ...++.++|||||||++|+|++|..||...+..
T Consensus 157 ----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~ 214 (282)
T cd06643 157 ----------------------IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPM 214 (282)
T ss_pred ----------------------ccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHH
Confidence 01112346889999999984 344677999999999999999999999887776
Q ss_pred HHHHHHHhCCCC-CCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCC
Q 001847 908 KTFANILHKDLK-FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 964 (1005)
Q Consensus 908 ~~~~~i~~~~~~-~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~ 964 (1005)
.....+...... ......++..+.+||.+||..+|.+||+ +.++++||||+..
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~il~~~~~~~~ 268 (282)
T cd06643 215 RVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKNVDARWT----TTQLLQHPFVTVN 268 (282)
T ss_pred HHHHHHhhcCCCCCCCccccCHHHHHHHHHHccCChhhCcC----HHHHhcCCCEecc
Confidence 666666554322 2223346788999999999999999999 9999999999964
No 149
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=6.1e-36 Score=333.51 Aligned_cols=264 Identities=25% Similarity=0.417 Sum_probs=219.9
Q ss_pred hcccccccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEE
Q 001847 662 ILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASF 741 (1005)
Q Consensus 662 ~~~~~~~i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~ 741 (1005)
+...|... .+|++++.||+|++|.||++.+..++..|++|.+.... ......+.+|+.+++.+.|+||+++++.|
T Consensus 12 ~~~~~~~~--~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~---~~~~~~~~~e~~~l~~~~h~~v~~~~~~~ 86 (296)
T cd06654 12 IVSVGDPK--KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ---QPKKELIINEILVMRENKNPNIVNYLDSY 86 (296)
T ss_pred ccccCCcc--cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence 34444443 58999999999999999999999999999999987543 22346678899999999999999999999
Q ss_pred EeCCeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCC
Q 001847 742 QTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 821 (1005)
Q Consensus 742 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a 821 (1005)
......|+||||+++++|.+++.. ..++...+..++.||+.||.|||+.||+|+||||+||+++.++.++|+|||++
T Consensus 87 ~~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~ 163 (296)
T cd06654 87 LVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFC 163 (296)
T ss_pred EeCCEEEEeecccCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccc
Confidence 999999999999999999999865 34789999999999999999999999999999999999999999999999987
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCC
Q 001847 822 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 901 (1005)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf 901 (1005)
....... .......|++.|+|||.+.+..++.++|||||||++|+|++|+.||
T Consensus 164 ~~~~~~~---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf 216 (296)
T cd06654 164 AQITPEQ---------------------------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 216 (296)
T ss_pred hhccccc---------------------------cccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCC
Confidence 5432110 0112346889999999998888889999999999999999999999
Q ss_pred CCCChHHHHHHHHhCC-CCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCC
Q 001847 902 RGKTRQKTFANILHKD-LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 964 (1005)
Q Consensus 902 ~~~~~~~~~~~i~~~~-~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~ 964 (1005)
...........+.... ........++..+.+|+.+||..+|++||+ +.++++||||...
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt----~~eil~~~~~~~~ 276 (296)
T cd06654 217 LNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGS----AKELLQHQFLKIA 276 (296)
T ss_pred CCCCHHHhHHHHhcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcC----HHHHhhChhhhcc
Confidence 8876654443333322 222233446788999999999999999999 9999999999864
No 150
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=9e-36 Score=324.19 Aligned_cols=256 Identities=28% Similarity=0.477 Sum_probs=222.7
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 752 (1005)
+|++++.||.|+||.||.+.+..++..+++|.+..... .......+.+|+.++++++|+||+++++++...+.++++||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e 79 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRL-SEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEME 79 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeeccc-chhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEE
Confidence 58999999999999999999999999999999875432 33445678899999999999999999999999999999999
Q ss_pred ccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001847 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (1005)
Q Consensus 753 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 832 (1005)
|+++++|.+++.......+++..+..++.|++.+|.|||+.|++|+||+|+||+++.++.+||+|||++.......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~---- 155 (256)
T cd08221 80 YANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY---- 155 (256)
T ss_pred ecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEccccc----
Confidence 9999999999987645568999999999999999999999999999999999999999999999999885432111
Q ss_pred CcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001847 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 912 (1005)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~~ 912 (1005)
.......|++.|+|||.+.+..++.++|+|||||++|+|++|..||......+....
T Consensus 156 -----------------------~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~ 212 (256)
T cd08221 156 -----------------------SMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVK 212 (256)
T ss_pred -----------------------ccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHH
Confidence 012235689999999999888888999999999999999999999998888777777
Q ss_pred HHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCC
Q 001847 913 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 961 (1005)
Q Consensus 913 i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff 961 (1005)
+..+.... .....+..+.+++.+||..+|.+||+ +.++++|+|+
T Consensus 213 ~~~~~~~~-~~~~~~~~~~~~i~~~l~~~p~~R~s----~~~ll~~~~l 256 (256)
T cd08221 213 IVQGNYTP-VVSVYSSELISLVHSLLQQDPEKRPT----ADEVLDQPLL 256 (256)
T ss_pred HHcCCCCC-CccccCHHHHHHHHHHcccCcccCCC----HHHHhhCcCC
Confidence 77665433 22456889999999999999999999 9999999996
No 151
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=4.6e-36 Score=332.21 Aligned_cols=244 Identities=18% Similarity=0.204 Sum_probs=205.9
Q ss_pred ccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEe----CCeEEEEEec
Q 001847 678 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT----KTHVCLITDY 753 (1005)
Q Consensus 678 ~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~----~~~~~lV~E~ 753 (1005)
..||+|+++.||++.+ +|+.||+|.++............+.+|+.++++++||||+++++++.. ...+++||||
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 6789999999999998 789999999987544344445778899999999999999999999876 4578999999
Q ss_pred cCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHc-CcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001847 754 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (1005)
Q Consensus 754 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~-gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 832 (1005)
+++|+|.+++... ..++......++.|++.||.|||+. +++||||||+|||++.++.+||+|||++......
T Consensus 104 ~~~g~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~----- 176 (283)
T PHA02988 104 CTRGYLREVLDKE--KDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSP----- 176 (283)
T ss_pred CCCCcHHHHHhhC--CCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhccc-----
Confidence 9999999999764 4588899999999999999999985 9999999999999999999999999998543211
Q ss_pred CcchhhhhcccCCCCCcccccccccccccccCCcccccccccC--CCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001847 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 910 (1005)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~ 910 (1005)
.....|++.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+
T Consensus 177 -------------------------~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~ 231 (283)
T PHA02988 177 -------------------------PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIY 231 (283)
T ss_pred -------------------------cccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHH
Confidence 112358899999999976 67889999999999999999999999988877777
Q ss_pred HHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHH
Q 001847 911 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 955 (1005)
Q Consensus 911 ~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~el 955 (1005)
..+.......+....++..+.+|+.+||+.||++|||+.+++..+
T Consensus 232 ~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l 276 (283)
T PHA02988 232 DLIINKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNL 276 (283)
T ss_pred HHHHhcCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHH
Confidence 777666555444445788999999999999999999954444433
No 152
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=9.8e-36 Score=326.03 Aligned_cols=261 Identities=28% Similarity=0.419 Sum_probs=215.9
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccCh------HHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR------NKVHRACAEREILDMLDHPFVPALYASFQTKTH 746 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~------~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 746 (1005)
+|.+.+.||.|++|.||+|.+..+++.+|+|.+........ .....+.+|+.+++.++||||+++++++...+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 47788999999999999999988899999998875433221 233567789999999999999999999999999
Q ss_pred EEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 001847 747 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 826 (1005)
Q Consensus 747 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~ 826 (1005)
.++||||+++++|.+++... +.++...+..++.|++.||.|||++|++|+||+|+||++++++.++|+|||++.....
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNY--GAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEA 158 (267)
T ss_pred cEEEEEecCCCCHHHHHHhc--cCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCccccc
Confidence 99999999999999999764 4588999999999999999999999999999999999999999999999999865431
Q ss_pred CCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001847 827 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 906 (1005)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~ 906 (1005)
.... ...........|+..|+|||.+.+..++.++|+|||||++|+|++|+.||.+.+.
T Consensus 159 ~~~~---------------------~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~ 217 (267)
T cd06628 159 NSLS---------------------TKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQ 217 (267)
T ss_pred cccc---------------------CCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccH
Confidence 1100 0001112235688999999999888888999999999999999999999988766
Q ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCC
Q 001847 907 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 961 (1005)
Q Consensus 907 ~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff 961 (1005)
...+..+..... .......+..+.++|.+||+.+|.+||+ +.++++||||
T Consensus 218 ~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~il~~~~~ 267 (267)
T cd06628 218 LQAIFKIGENAS-PEIPSNISSEAIDFLEKTFEIDHNKRPT----AAELLKHPFL 267 (267)
T ss_pred HHHHHHHhccCC-CcCCcccCHHHHHHHHHHccCCchhCcC----HHHHhhCCCC
Confidence 555555444211 1122346788999999999999999999 9999999997
No 153
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=4.8e-36 Score=328.62 Aligned_cols=254 Identities=26% Similarity=0.438 Sum_probs=212.2
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 750 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 750 (1005)
.++|++.+.||+|+||.||+|.+..+++.||+|.++.. .......+.+|+.+++.++||||+++++++...+.+|+|
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~---~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv 84 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLE---PGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWIC 84 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecC---chhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEE
Confidence 45899999999999999999999999999999998754 223345677899999999999999999999999999999
Q ss_pred EeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001847 751 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (1005)
Q Consensus 751 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 830 (1005)
|||+.+++|.+++... +.+++..++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||++......
T Consensus 85 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~--- 159 (267)
T cd06645 85 MEFCGGGSLQDIYHVT--GPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITAT--- 159 (267)
T ss_pred EeccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCc---
Confidence 9999999999998764 45899999999999999999999999999999999999999999999999987543211
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCccccccccc---CCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001847 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 907 (1005)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~---~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~ 907 (1005)
........|++.|+|||++. ...++.++|+|||||++|+|++|..||......
T Consensus 160 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~ 215 (267)
T cd06645 160 ------------------------IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPM 215 (267)
T ss_pred ------------------------ccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccch
Confidence 01112346899999999974 445778999999999999999999999766554
Q ss_pred HHHHHHHhCCCCCCC---CCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCC
Q 001847 908 KTFANILHKDLKFPS---STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 960 (1005)
Q Consensus 908 ~~~~~i~~~~~~~~~---~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpf 960 (1005)
.............+. ...++..+.+||.+||..+|++||+ +.++++|||
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~----~~~ll~~~~ 267 (267)
T cd06645 216 RALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPT----AEKLLQHPF 267 (267)
T ss_pred hhHHhhhccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcC----HHHHhcCCC
Confidence 444443333332222 2245678999999999999999999 999999998
No 154
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=4.6e-36 Score=334.64 Aligned_cols=256 Identities=25% Similarity=0.419 Sum_probs=215.6
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
.+|++++.||+|++|.||++.+..+++.||+|.+.... ......+.+|+.+++.++|+||+++++++...+..|+||
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 95 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQ---QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 95 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCc---cchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEee
Confidence 68999999999999999999999999999999987542 233456788999999999999999999999999999999
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 831 (1005)
||+++++|.+++.. ..++...+..++.|++.+|.|||+.|++|+||||+|||++.++.++|+|||++.......
T Consensus 96 e~~~~~~L~~~~~~---~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~--- 169 (297)
T cd06656 96 EYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--- 169 (297)
T ss_pred cccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCc---
Confidence 99999999999865 348899999999999999999999999999999999999999999999999885432110
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001847 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 911 (1005)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~ 911 (1005)
.......+++.|+|||.+.+..++.++|+|||||++|+|++|..||.+.+......
T Consensus 170 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~ 225 (297)
T cd06656 170 ------------------------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY 225 (297)
T ss_pred ------------------------cCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhee
Confidence 01123468899999999988888999999999999999999999998765543333
Q ss_pred HHHhC-CCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCC
Q 001847 912 NILHK-DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 964 (1005)
Q Consensus 912 ~i~~~-~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~ 964 (1005)
.+... ..........+..+.+|+.+||..+|++||+ +.++++||||+..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~il~~~~~~~~ 275 (297)
T cd06656 226 LIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGS----AKELLQHPFLKLA 275 (297)
T ss_pred eeccCCCCCCCCccccCHHHHHHHHHHccCChhhCcC----HHHHhcCchhccc
Confidence 22222 2222223346778899999999999999999 9999999999963
No 155
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=6.5e-36 Score=326.90 Aligned_cols=261 Identities=28% Similarity=0.423 Sum_probs=219.7
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
++|++.+.||.|+||.||++.+..++..+++|++..... ......+.+|+.+++.++|+||+++++.+...+..|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 78 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKC--QTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVM 78 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCc--chHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEE
Confidence 479999999999999999999988999999999875432 225677889999999999999999999999999999999
Q ss_pred eccCCCchhhHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001847 752 DYCPGGELFLLLDRQPT-KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~-~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 830 (1005)
||+++++|.+++..... ..+++..++.++.||+.||.|||+.|++|+||+|+||++++++.++|+|||++.........
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~ 158 (267)
T cd06610 79 PYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDR 158 (267)
T ss_pred eccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccc
Confidence 99999999999976422 46899999999999999999999999999999999999999999999999988554321110
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001847 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 909 (1005)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~ 909 (1005)
.........|++.|+|||++... .++.++|+|||||++|+|++|+.||...+....
T Consensus 159 -----------------------~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~ 215 (267)
T cd06610 159 -----------------------TRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKV 215 (267)
T ss_pred -----------------------cccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhh
Confidence 00112345689999999998776 778899999999999999999999988777666
Q ss_pred HHHHHhCCCCCC-CC---CCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCC
Q 001847 910 FANILHKDLKFP-SS---TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 961 (1005)
Q Consensus 910 ~~~i~~~~~~~~-~~---~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff 961 (1005)
+.+......... .. ..++..+.+|+.+||..||++||+ +.++++||||
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~ll~~p~~ 267 (267)
T cd06610 216 LMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPT----AEELLKHKFF 267 (267)
T ss_pred HHHHhcCCCCCcCCccccccccHHHHHHHHHHcCCChhhCcC----HHHHhhCCCC
Confidence 666665533221 11 246788999999999999999999 9999999998
No 156
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.1e-36 Score=346.30 Aligned_cols=252 Identities=25% Similarity=0.396 Sum_probs=200.8
Q ss_pred ccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 001847 670 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 749 (1005)
Q Consensus 670 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 749 (1005)
...+|++++.||+|+||.||+|.+..++..||+|+.... ....|+.++++++|+||+++++++...+..|+
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~---------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 134 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG---------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCM 134 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc---------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEE
Confidence 345799999999999999999999999999999975433 23458999999999999999999999999999
Q ss_pred EEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 001847 750 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 829 (1005)
Q Consensus 750 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~ 829 (1005)
||||+ .++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 135 v~e~~-~~~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~-- 210 (357)
T PHA03209 135 VLPHY-SSDLYTYLTKR-SRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA-- 210 (357)
T ss_pred EEEcc-CCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccC--
Confidence 99999 66888888654 345899999999999999999999999999999999999999999999999988532110
Q ss_pred CCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCC-CCCChH-
Q 001847 830 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF-RGKTRQ- 907 (1005)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf-~~~~~~- 907 (1005)
.......||+.|+|||++.+..++.++|||||||++|+|+++..|+ ......
T Consensus 211 --------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~ 264 (357)
T PHA03209 211 --------------------------PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTP 264 (357)
T ss_pred --------------------------cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcH
Confidence 0112356899999999999988999999999999999999754444 321110
Q ss_pred --------HHHHHHHhC----CCCCC----------------------------CCCCCCHHHHHHHHHccccCcCccCC
Q 001847 908 --------KTFANILHK----DLKFP----------------------------SSTPTSLHAKQLMYRLLHRDPKSRLG 947 (1005)
Q Consensus 908 --------~~~~~i~~~----~~~~~----------------------------~~~~~s~~l~~Ll~~~L~~dP~~Rpt 947 (1005)
..+..++.. ...++ .....+..+.+||.+||+.||.+|||
T Consensus 265 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpt 344 (357)
T PHA03209 265 EEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPS 344 (357)
T ss_pred HHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcC
Confidence 111111110 00011 01123556778999999999999999
Q ss_pred ChhcHHHHHcCCCCCCC
Q 001847 948 SHEGANEIKKHPFFKGV 964 (1005)
Q Consensus 948 ~~~~a~elL~hpff~~~ 964 (1005)
+.++|+||||+.+
T Consensus 345 ----a~e~l~hp~f~~~ 357 (357)
T PHA03209 345 ----AEEILNYPMFAQL 357 (357)
T ss_pred ----HHHHhcCchhccC
Confidence 9999999999864
No 157
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=5.6e-36 Score=330.95 Aligned_cols=256 Identities=28% Similarity=0.407 Sum_probs=212.1
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceEEEEEEe------
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQT------ 743 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~------ 743 (1005)
.+.|++.+.||.|+||.||++.+..+++.+|+|.+... ......+..|+.+++++ +|+||+++++++..
T Consensus 15 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~----~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 90 (282)
T cd06636 15 AGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT----EDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGH 90 (282)
T ss_pred hhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecC----hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCC
Confidence 35899999999999999999999999999999988643 23345677889999988 79999999999853
Q ss_pred CCeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcc
Q 001847 744 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 823 (1005)
Q Consensus 744 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~ 823 (1005)
.+.+|++|||+.+++|.+++.......+++..+..++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++..
T Consensus 91 ~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~ 170 (282)
T cd06636 91 DDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 170 (282)
T ss_pred CCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchhh
Confidence 46789999999999999999876556689999999999999999999999999999999999999999999999998754
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCccccccccc-----CCCCCChhhHHHHHHHHHHHHcCC
Q 001847 824 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGY 898 (1005)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~-----~~~~~~~sDIwSlGvll~eLltG~ 898 (1005)
.... ........|++.|+|||.+. ...++.++|||||||++|+|++|.
T Consensus 171 ~~~~---------------------------~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~ 223 (282)
T cd06636 171 LDRT---------------------------VGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGA 223 (282)
T ss_pred hhcc---------------------------ccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCC
Confidence 3210 01112356899999999985 345677999999999999999999
Q ss_pred CCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCC
Q 001847 899 TPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 961 (1005)
Q Consensus 899 ~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff 961 (1005)
.||...........+............++..+.+||.+||..||.+||+ +.+||+||||
T Consensus 224 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~----~~ell~~~~~ 282 (282)
T cd06636 224 PPLCDMHPMRALFLIPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPS----TEQLLKHPFI 282 (282)
T ss_pred CCccccCHHhhhhhHhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcC----HHHHhcCCCC
Confidence 9998766555544444333222223346789999999999999999999 9999999997
No 158
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=9.1e-36 Score=332.10 Aligned_cols=265 Identities=26% Similarity=0.436 Sum_probs=222.3
Q ss_pred hhcccccccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEE
Q 001847 661 KILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYAS 740 (1005)
Q Consensus 661 ~~~~~~~~i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~ 740 (1005)
.+...|.. ..+|++++.||.|++|.||++.+..+++.+++|.+.... ......+.+|+.+++.++||||+.++++
T Consensus 10 ~~~~~~~~--~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~ 84 (296)
T cd06655 10 TIVSIGDP--KKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQK---QPKKELIINEILVMKELKNPNIVNFLDS 84 (296)
T ss_pred HHHhcCCC--cceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEeccc---CchHHHHHHHHHHHHhcCCCceeeeeee
Confidence 34444443 257999999999999999999999999999999886542 2334677889999999999999999999
Q ss_pred EEeCCeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccC
Q 001847 741 FQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 820 (1005)
Q Consensus 741 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~ 820 (1005)
+...+.+|+||||+.+++|..++... .+++..+..++.||+.||+|||+.|++|+||||+||+++.++.++|+|||+
T Consensus 85 ~~~~~~~~lv~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~ 161 (296)
T cd06655 85 FLVGDELFVVMEYLAGGSLTDVVTET---CMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGF 161 (296)
T ss_pred EecCceEEEEEEecCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCcc
Confidence 99999999999999999999988653 489999999999999999999999999999999999999999999999998
Q ss_pred CcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCC
Q 001847 821 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP 900 (1005)
Q Consensus 821 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~P 900 (1005)
+....... .......|++.|+|||.+.+..++.++|||||||++|+|++|..|
T Consensus 162 ~~~~~~~~---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~p 214 (296)
T cd06655 162 CAQITPEQ---------------------------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPP 214 (296)
T ss_pred chhccccc---------------------------ccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 75432110 011234688999999999888889999999999999999999999
Q ss_pred CCCCChHHHHHHHHhCCC-CCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCC
Q 001847 901 FRGKTRQKTFANILHKDL-KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 964 (1005)
Q Consensus 901 f~~~~~~~~~~~i~~~~~-~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~ 964 (1005)
|.+.+.......+..... .+.....++..+.+||.+||..+|.+||+ +.++++||||+..
T Consensus 215 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt----~~~il~~~~~~~~ 275 (296)
T cd06655 215 YLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGS----AKELLQHPFLKLA 275 (296)
T ss_pred CCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHhhcChhhCCC----HHHHhhChHhhhc
Confidence 988777655555443322 22233456788999999999999999999 9999999999864
No 159
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=8.3e-36 Score=324.47 Aligned_cols=256 Identities=25% Similarity=0.471 Sum_probs=220.3
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 752 (1005)
+|++++.||.|+||.||++.+..+++.|++|.+..... .......+.+|+.+++.++||||+++++++...+..|+|||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKM-SPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMD 79 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhC-ChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEe
Confidence 58999999999999999999999999999999875422 23345678889999999999999999999999999999999
Q ss_pred ccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001847 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (1005)
Q Consensus 753 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 832 (1005)
|+.+++|.+++.......+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++.......
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~---- 155 (256)
T cd08218 80 YCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV---- 155 (256)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcch----
Confidence 9999999999876544568999999999999999999999999999999999999999999999999885432110
Q ss_pred CcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001847 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 912 (1005)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~~ 912 (1005)
.......|++.|+|||++.+...+.++|+|||||++|+|++|..||......+....
T Consensus 156 -----------------------~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~ 212 (256)
T cd08218 156 -----------------------ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLK 212 (256)
T ss_pred -----------------------hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHH
Confidence 011123578899999999888888999999999999999999999988877777777
Q ss_pred HHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCC
Q 001847 913 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 961 (1005)
Q Consensus 913 i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff 961 (1005)
+..+.... .....+..+.++|.+||+.+|++||+ +.++++||||
T Consensus 213 ~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~vl~~~~~ 256 (256)
T cd08218 213 IIRGSYPP-VSSHYSYDLRNLVSQLFKRNPRDRPS----VNSILEKNFI 256 (256)
T ss_pred HhcCCCCC-CcccCCHHHHHHHHHHhhCChhhCcC----HHHHhhCcCC
Confidence 76654432 23346788999999999999999999 9999999998
No 160
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5e-37 Score=318.34 Aligned_cols=276 Identities=37% Similarity=0.730 Sum_probs=240.7
Q ss_pred cccccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceEEEEEEe
Q 001847 665 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQT 743 (1005)
Q Consensus 665 ~~~~i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~ 743 (1005)
+.+.+.+++|.++++||+|+|.+|.++++++|.+.||+|++++..+.+.+...-+..|..+..+- +||++|-++.+|..
T Consensus 243 ~~~~l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqt 322 (593)
T KOG0695|consen 243 ISQGLGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQT 322 (593)
T ss_pred cccccccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcc
Confidence 34556788999999999999999999999999999999999999888888888888888888776 79999999999999
Q ss_pred CCeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcc
Q 001847 744 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 823 (1005)
Q Consensus 744 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~ 823 (1005)
+..+++|.||++||+|--.++++ ..+++++++.+...|..||.|||+.|||.||||.+|+|++..|++||.|+|+++.
T Consensus 323 esrlffvieyv~ggdlmfhmqrq--rklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke 400 (593)
T KOG0695|consen 323 ESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKE 400 (593)
T ss_pred cceEEEEEEEecCcceeeehhhh--hcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhc
Confidence 99999999999999998777765 4599999999999999999999999999999999999999999999999999854
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCC-
Q 001847 824 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR- 902 (1005)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~- 902 (1005)
.- .+....+++||||.|+|||++.+..|+..+|-|+||+++++|+.|+.||.
T Consensus 401 ~l---------------------------~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdi 453 (593)
T KOG0695|consen 401 GL---------------------------GPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDI 453 (593)
T ss_pred CC---------------------------CCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcce
Confidence 21 22345678999999999999999999999999999999999999999994
Q ss_pred -------CCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChh--cHHHHHcCCCCCCCChhhhhh
Q 001847 903 -------GKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE--GANEIKKHPFFKGVNWALVRC 971 (1005)
Q Consensus 903 -------~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~--~a~elL~hpff~~~~~~~~~~ 971 (1005)
..+....++-|+.+.+.+|.+ +|-.+..+++..|.+||.+|+.-.. ...++..|+||+.++|..++-
T Consensus 454 vgm~n~d~ntedylfqvilekqiriprs--lsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~idwd~leq 529 (593)
T KOG0695|consen 454 VGMDNPDMNTEDYLFQVILEKQIRIPRS--LSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSIDWDLLEQ 529 (593)
T ss_pred ecCCCcccchhHHHHHHHhhhcccccce--eehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCCHHHHhh
Confidence 122334456667777777765 4556678999999999999986542 478999999999999999843
No 161
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=1.2e-35 Score=329.75 Aligned_cols=271 Identities=18% Similarity=0.262 Sum_probs=217.5
Q ss_pred ccccCCccccccccccCcEEEEEEEEcC-----CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEE
Q 001847 668 QINLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 742 (1005)
Q Consensus 668 ~i~~~~y~~~~~LG~G~~g~Vy~a~~~~-----~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~ 742 (1005)
.+..++|++.+.||+|+||.||++.++. .+..||+|.+.... .......+.+|+.+++.++||||+++++++.
T Consensus 2 ~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~ 79 (288)
T cd05061 2 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA--SLRERIEFLNEASVMKGFTCHHVVRLLGVVS 79 (288)
T ss_pred cccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEc
Confidence 4566799999999999999999997642 35689999876432 2233456778999999999999999999999
Q ss_pred eCCeEEEEEeccCCCchhhHHhhCC--------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEE
Q 001847 743 TKTHVCLITDYCPGGELFLLLDRQP--------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVS 814 (1005)
Q Consensus 743 ~~~~~~lV~E~~~ggsL~~~l~~~~--------~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vk 814 (1005)
..+..|+||||+.+++|.+++.... ...++...+..++.||+.||.|||++||+||||||+||+++.++.++
T Consensus 80 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~ 159 (288)
T cd05061 80 KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVK 159 (288)
T ss_pred CCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEE
Confidence 9999999999999999999997521 12356678899999999999999999999999999999999999999
Q ss_pred EEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHH
Q 001847 815 LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEM 894 (1005)
Q Consensus 815 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eL 894 (1005)
|+|||++........ ........++..|+|||.+.+..++.++|||||||++|+|
T Consensus 160 L~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el 214 (288)
T cd05061 160 IGDFGMTRDIYETDY-------------------------YRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 214 (288)
T ss_pred ECcCCcccccccccc-------------------------ccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHH
Confidence 999998854321100 0011223456789999999888899999999999999999
Q ss_pred Hc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHc--CCCCCCCCh
Q 001847 895 LY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK--HPFFKGVNW 966 (1005)
Q Consensus 895 lt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~--hpff~~~~~ 966 (1005)
++ |..||.+....+....+...... ......+..+.+++.+||+.+|.+||++.++++.+.+ ||||.+++|
T Consensus 215 ~~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~~~ 288 (288)
T cd05061 215 TSLAEQPYQGLSNEQVLKFVMDGGYL-DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVSF 288 (288)
T ss_pred HhCCCCCCCCCCHHHHHHHHHcCCCC-CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCCCC
Confidence 98 88999887777766665544322 2223457889999999999999999996555555554 999999988
No 162
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=1.2e-35 Score=327.94 Aligned_cols=260 Identities=35% Similarity=0.640 Sum_probs=209.0
Q ss_pred cccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHH---HHHHhCCCCCcceEEEEEEeCCeEEEEEeccC
Q 001847 679 PLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAER---EILDMLDHPFVPALYASFQTKTHVCLITDYCP 755 (1005)
Q Consensus 679 ~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~---~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ 755 (1005)
.||+|+||.||++.+..+++.||+|.+.+..............|. .+++...||+|+.+++++...+.+|+||||+.
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 479999999999999999999999998765333222222233343 34455689999999999999999999999999
Q ss_pred CCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcc
Q 001847 756 GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT 835 (1005)
Q Consensus 756 ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~ 835 (1005)
|++|..++... ..+++..++.++.|++.||.|||+.+|+|+||||+||+++.++.++|+|||++......
T Consensus 81 g~~L~~~l~~~--~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~-------- 150 (278)
T cd05606 81 GGDLHYHLSQH--GVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK-------- 150 (278)
T ss_pred CCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCcc--------
Confidence 99999988654 45999999999999999999999999999999999999999999999999988532210
Q ss_pred hhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCC---hHHHHH
Q 001847 836 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKT---RQKTFA 911 (1005)
Q Consensus 836 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlGvll~eLltG~~Pf~~~~---~~~~~~ 911 (1005)
......|+..|+|||++.+. .++.++|||||||++|+|++|+.||.+.. ......
T Consensus 151 ---------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~ 209 (278)
T cd05606 151 ---------------------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR 209 (278)
T ss_pred ---------------------CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHH
Confidence 01234689999999998754 57889999999999999999999997753 222222
Q ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccC-----CChhcHHHHHcCCCCCCCChhhhhhcCCC
Q 001847 912 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRL-----GSHEGANEIKKHPFFKGVNWALVRCMNPP 975 (1005)
Q Consensus 912 ~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rp-----t~~~~a~elL~hpff~~~~~~~~~~~~~~ 975 (1005)
.+......++ ...+..+.+++.+||..+|.+|| + +.++++||||+..+|+.+.....|
T Consensus 210 ~~~~~~~~~~--~~~s~~~~~li~~~l~~~p~~R~~~~~~~----~~~ll~~~~~~~~~~~~~~~~~~~ 272 (278)
T cd05606 210 MTLTMAVELP--DSFSPELRSLLEGLLQRDVNRRLGCLGRG----AQEVKEHPFFRSLDWQMVFLQKYP 272 (278)
T ss_pred HhhccCCCCC--CcCCHHHHHHHHHHhhcCHHhccCCCCCC----HHHHHhCccccCCCchHhhhcccC
Confidence 2222233333 23588999999999999999999 7 999999999999999988655444
No 163
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-37 Score=330.58 Aligned_cols=263 Identities=24% Similarity=0.423 Sum_probs=216.4
Q ss_pred hcccccccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-C-C----Ccc
Q 001847 662 ILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-H-P----FVP 735 (1005)
Q Consensus 662 ~~~~~~~i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~-h-p----nIv 735 (1005)
++..|.-+ ..+|.+++.+|+|.||.|-.+.|..++..+|||+++.- ....+...-|+++|.++. + | -++
T Consensus 80 v~~~gD~l-~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V----~kYreAa~iEi~vLqki~~~DP~g~~rcv 154 (415)
T KOG0671|consen 80 VYQVGDIL-TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV----DKYREAALIEIEVLQKINESDPNGKFRCV 154 (415)
T ss_pred EEEecccc-ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH----HHHhhHHHHHHHHHHHHHhcCCCCceEEE
Confidence 45555544 68999999999999999999999999999999998743 233345556899999993 2 2 378
Q ss_pred eEEEEEEeCCeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEec------
Q 001847 736 ALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG------ 809 (1005)
Q Consensus 736 ~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~------ 809 (1005)
++.+||+..++.|||+|.+ |.++++++..+...+++..+++.++.||+.+|+|||+++++|.||||+|||+.+
T Consensus 155 ~m~~wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~ 233 (415)
T KOG0671|consen 155 QMRDWFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKT 233 (415)
T ss_pred eeehhhhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEE
Confidence 8899999999999999999 899999999988889999999999999999999999999999999999999953
Q ss_pred --------------CCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC
Q 001847 810 --------------NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG 875 (1005)
Q Consensus 810 --------------~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~ 875 (1005)
+-.|+|+|||.|.... ..+.+.+.|..|+|||++.+
T Consensus 234 ~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~------------------------------e~hs~iVsTRHYRAPEViLg 283 (415)
T KOG0671|consen 234 YNPKKKVCFIRPLKSTAIKVIDFGSATFDH------------------------------EHHSTIVSTRHYRAPEVILG 283 (415)
T ss_pred eccCCccceeccCCCcceEEEecCCcceec------------------------------cCcceeeeccccCCchheec
Confidence 2248999999884422 12356789999999999999
Q ss_pred CCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHH---HHHHHh------------------CCCCCCCC-----------
Q 001847 876 AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT---FANILH------------------KDLKFPSS----------- 923 (1005)
Q Consensus 876 ~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~---~~~i~~------------------~~~~~~~~----------- 923 (1005)
-+++.++||||+||+|+||++|...|+..++.+. ++.|+. +.+.|+..
T Consensus 284 LGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~ 363 (415)
T KOG0671|consen 284 LGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFE 363 (415)
T ss_pred cCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhc
Confidence 9999999999999999999999999998776553 333322 11222211
Q ss_pred ------------CCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCC
Q 001847 924 ------------TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 964 (1005)
Q Consensus 924 ------------~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~ 964 (1005)
......+.+||++||.+||.+|+| +.|+|.||||+..
T Consensus 364 ~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiT----l~EAL~HpFF~~~ 412 (415)
T KOG0671|consen 364 PCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRIT----LREALSHPFFARL 412 (415)
T ss_pred CCccHHHHhccCcHHHhHHHHHHHHHHccCcccccc----HHHHhcCHHhhcC
Confidence 011235789999999999999999 9999999999964
No 164
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=7.6e-36 Score=327.06 Aligned_cols=254 Identities=25% Similarity=0.401 Sum_probs=210.9
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 750 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 750 (1005)
..+|++.+.||+|+||.||++.+..+++.||+|++.... ......+.+|+.+++.++||||+++++++...+..|+|
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv 84 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEP---GDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWIC 84 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCc---cchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEE
Confidence 468999999999999999999999999999999987542 23345677899999999999999999999999999999
Q ss_pred EeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001847 751 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (1005)
Q Consensus 751 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 830 (1005)
|||+.+++|.+++... ..+++..+..++.|++.||.|||+.||+|+||+|+||+++.++.++|+|||++......
T Consensus 85 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~--- 159 (267)
T cd06646 85 MEYCGGGSLQDIYHVT--GPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITAT--- 159 (267)
T ss_pred EeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeeccc---
Confidence 9999999999998754 45899999999999999999999999999999999999999999999999998543210
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCccccccccc---CCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001847 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 907 (1005)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~---~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~ 907 (1005)
........|++.|+|||.+. ...++.++|+|||||++|+|++|..||......
T Consensus 160 ------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~ 215 (267)
T cd06646 160 ------------------------IAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPM 215 (267)
T ss_pred ------------------------ccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchh
Confidence 01122346889999999984 344677999999999999999999999766544
Q ss_pred HHHHHHHhCCCCCCC---CCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCC
Q 001847 908 KTFANILHKDLKFPS---STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 960 (1005)
Q Consensus 908 ~~~~~i~~~~~~~~~---~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpf 960 (1005)
.....+....+..+. ....+..+.+||.+||..+|++||+ ++++|+|+|
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~----~~~il~~l~ 267 (267)
T cd06646 216 RALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPT----AERLLTHLF 267 (267)
T ss_pred hhheeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcC----HHHHhcCCC
Confidence 433333333332222 2345788999999999999999999 999999997
No 165
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1.1e-35 Score=328.83 Aligned_cols=256 Identities=27% Similarity=0.426 Sum_probs=209.7
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
++|++.+.||+|++|.||++.+..+++.||+|.+..... .......+.+|+.+++.++|+||+++++++.....+++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 79 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESED-DPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVF 79 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeeccc-CccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEE
Confidence 479999999999999999999998999999998875421 2223345678999999999999999999999999999999
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 831 (1005)
||+++++|..++... ..+++..++.++.||+.+|.|||+.|++|+||||+||++++++.++|+|||++........
T Consensus 80 e~~~~~~l~~~~~~~--~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~-- 155 (286)
T cd07847 80 EYCDHTVLNELEKNP--RGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD-- 155 (286)
T ss_pred eccCccHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCcc--
Confidence 999988888776543 3589999999999999999999999999999999999999999999999999855321110
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001847 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 910 (1005)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~ 910 (1005)
......++..|+|||++.+ ..++.++|||||||++|+|++|..||.+....+..
T Consensus 156 -------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~ 210 (286)
T cd07847 156 -------------------------DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQL 210 (286)
T ss_pred -------------------------cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence 1123457889999999876 45678999999999999999999999887765554
Q ss_pred HHHHhCC-------------------CCCCC----------CCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCC
Q 001847 911 ANILHKD-------------------LKFPS----------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 961 (1005)
Q Consensus 911 ~~i~~~~-------------------~~~~~----------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff 961 (1005)
..+.... ...+. ....+..+.+||.+||..+|++||+ +.+++.||||
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~eil~~~~f 286 (286)
T cd07847 211 YLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLS----CEELLEHPYF 286 (286)
T ss_pred HHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCC----HHHHhcCCCC
Confidence 4432210 00111 1235678899999999999999999 9999999998
No 166
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=1.6e-35 Score=324.22 Aligned_cols=261 Identities=24% Similarity=0.354 Sum_probs=214.3
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeeccccc---ChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML---NRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 749 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~---~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 749 (1005)
+|++.+.||.|+||.||++.+ .++..+|+|.+...... .......+.+|+.+++.++|+||+++++++...+.+|+
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 79 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISI 79 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEE
Confidence 588999999999999999987 57889999988753211 22344668889999999999999999999999999999
Q ss_pred EEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 001847 750 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 829 (1005)
Q Consensus 750 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~ 829 (1005)
||||+++++|.+++... ..+++..+..++.||+.||+|||+.||+|+||+|+||++++++.++|+|||++........
T Consensus 80 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 157 (265)
T cd06631 80 FMEFVPGGSISSILNRF--GPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGL 157 (265)
T ss_pred EEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhccc
Confidence 99999999999999764 3588999999999999999999999999999999999999999999999998854321100
Q ss_pred CCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001847 830 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 909 (1005)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~ 909 (1005)
. ...........|+..|+|||++.+..++.++|+|||||++|+|++|..||...+....
T Consensus 158 ~---------------------~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~ 216 (265)
T cd06631 158 H---------------------GTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAA 216 (265)
T ss_pred c---------------------ccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHH
Confidence 0 0001112235689999999999888889999999999999999999999987665554
Q ss_pred HHHHHhCC-CCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCC
Q 001847 910 FANILHKD-LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 961 (1005)
Q Consensus 910 ~~~i~~~~-~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff 961 (1005)
...+.... ........++..+.+||.+||..+|.+||+ +.++++||||
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~----~~~~l~~~~~ 265 (265)
T cd06631 217 MFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPS----ALQLLRHDFL 265 (265)
T ss_pred HHHhhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCC----HHHHhcCCCC
Confidence 44444332 222233457889999999999999999999 9999999997
No 167
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=1.6e-35 Score=327.55 Aligned_cols=257 Identities=30% Similarity=0.490 Sum_probs=213.3
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 752 (1005)
+|++.+.||+|++|.||+|.+..++..|++|.+..... .......+.+|+.++++++||||+++++++......|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e 79 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRL-EGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVME 79 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccc-cchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEec
Confidence 58999999999999999999998999999999876532 23345678899999999999999999999999999999999
Q ss_pred ccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001847 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (1005)
Q Consensus 753 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 832 (1005)
|+ +++|.+++.... ..+++..++.++.||+.||.|||+.|++|+||||+||+++.++.++|+|||++........
T Consensus 80 ~~-~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~--- 154 (286)
T cd07832 80 YM-PSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP--- 154 (286)
T ss_pred cc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC---
Confidence 99 999999987543 5689999999999999999999999999999999999999999999999998855432110
Q ss_pred CcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001847 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 911 (1005)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~ 911 (1005)
.......|+..|+|||.+.+. .++.++|||||||++|+|++|.+||.+......+.
T Consensus 155 -----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~ 211 (286)
T cd07832 155 -----------------------RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLA 211 (286)
T ss_pred -----------------------CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHH
Confidence 111234688999999998654 45789999999999999999999998877666555
Q ss_pred HHHhCC-------------------CCCCC---------CCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCC
Q 001847 912 NILHKD-------------------LKFPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 962 (1005)
Q Consensus 912 ~i~~~~-------------------~~~~~---------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~ 962 (1005)
.+...- ..++. ....+..+.+||.+||..+|++||+ ++++|+||||.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~----~~~~l~h~~~~ 286 (286)
T cd07832 212 IVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLS----AAEALRHPYFT 286 (286)
T ss_pred HHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCC----HHHHhhCcCcC
Confidence 444310 00110 1234678899999999999999999 99999999994
No 168
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=1.1e-35 Score=334.68 Aligned_cols=251 Identities=26% Similarity=0.429 Sum_probs=192.5
Q ss_pred cccccccCcEEEEEEEEc--CCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEe--CCeEEEEEe
Q 001847 677 IKPLGSGDTGSVHLVELC--GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT--KTHVCLITD 752 (1005)
Q Consensus 677 ~~~LG~G~~g~Vy~a~~~--~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~~~~~lV~E 752 (1005)
.+.||+|+||.||+|.+. .+++.||+|.+.... ....+.+|+.+++.++||||++++++|.. ...+|+|||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e 80 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG-----ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFD 80 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC-----CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEe
Confidence 367999999999999975 467899999886532 12346789999999999999999999854 467899999
Q ss_pred ccCCCchhhHHhhC-------CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEe----cCCcEEEEeccCC
Q 001847 753 YCPGGELFLLLDRQ-------PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ----GNGHVSLTDFDLS 821 (1005)
Q Consensus 753 ~~~ggsL~~~l~~~-------~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~----~~g~vkL~DFG~a 821 (1005)
|+ +++|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++
T Consensus 81 ~~-~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 81 YA-EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred cc-CCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 99 56888887532 123589999999999999999999999999999999999994 5578999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCC
Q 001847 822 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTP 900 (1005)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlGvll~eLltG~~P 900 (1005)
........ +........||+.|+|||++.+. .++.++|||||||++|+|++|++|
T Consensus 160 ~~~~~~~~------------------------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~ 215 (317)
T cd07868 160 RLFNSPLK------------------------PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPI 215 (317)
T ss_pred eccCCCCc------------------------cccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCC
Confidence 65431110 01112345789999999998774 578899999999999999999999
Q ss_pred CCCCCh---------HHHHHHHHhCC-------------CC-------------CC----------CCCCCCHHHHHHHH
Q 001847 901 FRGKTR---------QKTFANILHKD-------------LK-------------FP----------SSTPTSLHAKQLMY 935 (1005)
Q Consensus 901 f~~~~~---------~~~~~~i~~~~-------------~~-------------~~----------~~~~~s~~l~~Ll~ 935 (1005)
|.+... ...+..+.... +. .. .....+..+.+||.
T Consensus 216 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~ 295 (317)
T cd07868 216 FHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQ 295 (317)
T ss_pred ccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHH
Confidence 965332 11111111100 00 00 00123456889999
Q ss_pred HccccCcCccCCChhcHHHHHcCCCC
Q 001847 936 RLLHRDPKSRLGSHEGANEIKKHPFF 961 (1005)
Q Consensus 936 ~~L~~dP~~Rpt~~~~a~elL~hpff 961 (1005)
+||++||.+||| ++++|+||||
T Consensus 296 ~mL~~dP~~R~t----~~e~l~hp~f 317 (317)
T cd07868 296 KLLTMDPIKRIT----SEQAMQDPYF 317 (317)
T ss_pred HHhccCcccCCC----HHHHhcCCCC
Confidence 999999999999 9999999998
No 169
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=4.6e-36 Score=327.03 Aligned_cols=255 Identities=38% Similarity=0.725 Sum_probs=216.5
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 752 (1005)
+|++.+.||.|+||.||+|.+..++..|++|.+.............+.+|+.++++++||||+++++++......|+|||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 48999999999999999999998999999999987654444567788999999999999999999999999999999999
Q ss_pred ccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001847 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (1005)
Q Consensus 753 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 832 (1005)
|+.+++|..++... ..+++..+..++.||+.||.|||++|++|+||+|+||++++++.++|+|||.+.......
T Consensus 81 ~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~---- 154 (258)
T cd05578 81 LLLGGDLRYHLSQK--VKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT---- 154 (258)
T ss_pred CCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc----
Confidence 99999999999764 468999999999999999999999999999999999999999999999999875432110
Q ss_pred CcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCh--HHHH
Q 001847 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR--QKTF 910 (1005)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~--~~~~ 910 (1005)
......|+..|+|||.+....++.++|+||||+++|+|++|..||..... ...+
T Consensus 155 ------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~ 210 (258)
T cd05578 155 ------------------------LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQI 210 (258)
T ss_pred ------------------------cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHH
Confidence 11234578899999999888889999999999999999999999987664 2323
Q ss_pred HHHHh-CCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCC
Q 001847 911 ANILH-KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 961 (1005)
Q Consensus 911 ~~i~~-~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff 961 (1005)
..... .....+ ...+..+.++|.+||..||.+||++. ++++++||||
T Consensus 211 ~~~~~~~~~~~~--~~~~~~~~~~i~~~l~~~p~~R~~~~--~~~l~~~~~~ 258 (258)
T cd05578 211 RAKQETADVLYP--ATWSTEAIDAINKLLERDPQKRLGDN--LKDLKNHPYF 258 (258)
T ss_pred HHHhccccccCc--ccCcHHHHHHHHHHccCChhHcCCcc--HHHHhcCCCC
Confidence 23322 222222 34678999999999999999999932 3999999998
No 170
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=2.1e-35 Score=320.90 Aligned_cols=255 Identities=28% Similarity=0.476 Sum_probs=218.4
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 752 (1005)
+|++.+.||+|++|.||++.+..++..+|+|.+..... .......+.+|+.+++.++||||+++++.+...+..++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQM-TKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVME 79 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEecccc-ccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEe
Confidence 58999999999999999999999999999999876533 33445778899999999999999999999999999999999
Q ss_pred ccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecC-CcEEEEeccCCcccCCCCCCC
Q 001847 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDLSCLTSCKPQLL 831 (1005)
Q Consensus 753 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~-g~vkL~DFG~a~~~~~~~~~~ 831 (1005)
|+++++|.+++.......+++..+..++.|++.+|.|||++|++|+||+|+||+++.+ +.++|+|||++......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~---- 155 (256)
T cd08220 80 YAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK---- 155 (256)
T ss_pred cCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCC----
Confidence 9999999999987555568999999999999999999999999999999999999865 46899999988543211
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001847 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 911 (1005)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~ 911 (1005)
.......|++.|+|||.+.+..++.++||||||+++|+|++|+.||.+.+......
T Consensus 156 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~ 211 (256)
T cd08220 156 ------------------------SKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVL 211 (256)
T ss_pred ------------------------ccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHH
Confidence 01123468889999999988888899999999999999999999998877766666
Q ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCC
Q 001847 912 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 961 (1005)
Q Consensus 912 ~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff 961 (1005)
.+...... +.....+..+.+|+.+||..+|++||| +.++++||||
T Consensus 212 ~~~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rpt----~~~ll~~p~~ 256 (256)
T cd08220 212 KIMSGTFA-PISDRYSPDLRQLILSMLNLDPSKRPQ----LSQIMAQPIC 256 (256)
T ss_pred HHHhcCCC-CCCCCcCHHHHHHHHHHccCChhhCCC----HHHHhhCCCC
Confidence 66554332 222346888999999999999999999 9999999997
No 171
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=2.4e-35 Score=323.16 Aligned_cols=259 Identities=26% Similarity=0.393 Sum_probs=210.8
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeeccccc--ChHHHHHHHHHHHHHHhCCCCCcceEEEEEEe--CCeEE
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--NRNKVHRACAEREILDMLDHPFVPALYASFQT--KTHVC 748 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~~~~~ 748 (1005)
.|++.+.||+|+||.||++.+..++..|++|.+...... .......+.+|+.+++.++||||+++++++.. ...++
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLT 82 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEE
Confidence 699999999999999999999999999999988754221 22345678889999999999999999998875 46789
Q ss_pred EEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 001847 749 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 828 (1005)
Q Consensus 749 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~ 828 (1005)
++|||+++++|.+++... ..++...++.++.||+.||.|||++||+|+||+|+||+++.++.++|+|||++.......
T Consensus 83 l~~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~ 160 (266)
T cd06651 83 IFMEYMPGGSVKDQLKAY--GALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTIC 160 (266)
T ss_pred EEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCcccccccc
Confidence 999999999999998764 348899999999999999999999999999999999999999999999999885432100
Q ss_pred CCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001847 829 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 908 (1005)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~ 908 (1005)
. .........++..|+|||.+.+..++.++|||||||++|+|++|+.||.......
T Consensus 161 ~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~ 216 (266)
T cd06651 161 M------------------------SGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMA 216 (266)
T ss_pred c------------------------cCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHH
Confidence 0 0001122458899999999988888999999999999999999999998776555
Q ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCC
Q 001847 909 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 962 (1005)
Q Consensus 909 ~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~ 962 (1005)
....+.............+..+.+|+ +||..+|++||+ ++++++||||+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~----~~eil~hp~~~ 265 (266)
T cd06651 217 AIFKIATQPTNPQLPSHISEHARDFL-GCIFVEARHRPS----AEELLRHPFAQ 265 (266)
T ss_pred HHHHHhcCCCCCCCchhcCHHHHHHH-HHhcCChhhCcC----HHHHhcCcccc
Confidence 55444332221111223577788888 677789999999 99999999996
No 172
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=5.4e-36 Score=331.31 Aligned_cols=255 Identities=23% Similarity=0.417 Sum_probs=205.1
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 752 (1005)
+|++++.||.|+||.||+|.+..+|..|++|.+..... .......+.+|+.++++++||||+++++++...+.+|+|+|
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFE 79 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccc-cccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEe
Confidence 48899999999999999999999999999999875422 22233566789999999999999999999999999999999
Q ss_pred ccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001847 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (1005)
Q Consensus 753 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 832 (1005)
|+. ++|.+++... ...+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||++.......
T Consensus 80 ~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~---- 153 (284)
T cd07839 80 YCD-QDLKKYFDSC-NGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV---- 153 (284)
T ss_pred cCC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCC----
Confidence 995 6788777643 2458999999999999999999999999999999999999999999999999885432110
Q ss_pred CcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCC-CCCChHHHH
Q 001847 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPF-RGKTRQKTF 910 (1005)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlGvll~eLltG~~Pf-~~~~~~~~~ 910 (1005)
.......+++.|+|||++.+. .++.++|||||||++|+|++|..|| .+.+..+.+
T Consensus 154 -----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~ 210 (284)
T cd07839 154 -----------------------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQL 210 (284)
T ss_pred -----------------------CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHH
Confidence 111234578899999998764 4688999999999999999988885 444444444
Q ss_pred HHHHhCC--------------CC---CC----------CCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCC
Q 001847 911 ANILHKD--------------LK---FP----------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 961 (1005)
Q Consensus 911 ~~i~~~~--------------~~---~~----------~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff 961 (1005)
..+.... .. ++ ....++.++.+||.+||..||.+||| ++++++||||
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t----~~~il~h~~f 284 (284)
T cd07839 211 KRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRIS----AEEALQHPYF 284 (284)
T ss_pred HHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCC----HHHHhcCCCC
Confidence 3332210 00 00 01235778899999999999999999 9999999998
No 173
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=2.1e-35 Score=320.93 Aligned_cols=253 Identities=28% Similarity=0.451 Sum_probs=214.7
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
++|++.+.||.|+||.||++.+..+++.|++|.+.... ....+.+|+.+++.++|+||+++++++......|+++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-----~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~ 77 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE-----DLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVM 77 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH-----HHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEE
Confidence 58999999999999999999998889999999987542 2578889999999999999999999999999999999
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 831 (1005)
||+.+++|.+++... ...+++..++.++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++.......
T Consensus 78 e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~--- 153 (256)
T cd06612 78 EYCGAGSVSDIMKIT-NKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTM--- 153 (256)
T ss_pred ecCCCCcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCc---
Confidence 999999999998653 2458999999999999999999999999999999999999999999999999985432110
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001847 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 911 (1005)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~ 911 (1005)
.......|+..|+|||++.+..++.++||||||+++|+|++|+.||..........
T Consensus 154 ------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~ 209 (256)
T cd06612 154 ------------------------AKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIF 209 (256)
T ss_pred ------------------------cccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhh
Confidence 01123457889999999988888999999999999999999999998766654443
Q ss_pred HHHhCCC-CCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCC
Q 001847 912 NILHKDL-KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 961 (1005)
Q Consensus 912 ~i~~~~~-~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff 961 (1005)
.+..... .+.....++..+.+||.+||..+|++||+ +.++|+||||
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps----~~~il~~~~~ 256 (256)
T cd06612 210 MIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPS----AIQLLQHPFI 256 (256)
T ss_pred hhccCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcC----HHHHhcCCCC
Confidence 3332221 12222346778999999999999999999 9999999997
No 174
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-36 Score=356.21 Aligned_cols=272 Identities=28% Similarity=0.382 Sum_probs=219.2
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-CCCcceEEEE-EEe---
Q 001847 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYAS-FQT--- 743 (1005)
Q Consensus 669 i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~-~~~--- 743 (1005)
+...+++|.+.|.+|||+.||+|.+...|..||+|.+-.. +......+.+|+.+|++|+ |+|||.+++. ...
T Consensus 34 Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~---de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~ 110 (738)
T KOG1989|consen 34 VGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN---DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSS 110 (738)
T ss_pred ECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC---CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccC
Confidence 3456788999999999999999999888899999988643 6778889999999999995 9999999993 221
Q ss_pred ---CCeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC--cccCCCCCCcEEEecCCcEEEEec
Q 001847 744 ---KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQGNGHVSLTDF 818 (1005)
Q Consensus 744 ---~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~g--IvHrDLkP~NILi~~~g~vkL~DF 818 (1005)
.-.++|+||||.||.|-++|..+....|++..+++|+.|+++||++||... |||||||-+||||+.+|+.|||||
T Consensus 111 ~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDF 190 (738)
T KOG1989|consen 111 NNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDF 190 (738)
T ss_pred CCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcc
Confidence 135789999999999999998655556999999999999999999999997 999999999999999999999999
Q ss_pred cCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccc---cCCCCCChhhHHHHHHHHHHHH
Q 001847 819 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII---AGAGHTSAVDWWALGILLYEML 895 (1005)
Q Consensus 819 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l---~~~~~~~~sDIwSlGvll~eLl 895 (1005)
|.++..-.... ...+. .-........-|+.|+|||.+ .+.+.+.|+|||+|||+||.|+
T Consensus 191 GSatt~~~~~~----~~~e~--------------~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLC 252 (738)
T KOG1989|consen 191 GSATTKILSPT----SAQEV--------------NYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLC 252 (738)
T ss_pred cccccccCCCc----cHHHH--------------HHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHH
Confidence 99854321110 00000 000111223579999999986 5678899999999999999999
Q ss_pred cCCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHH----cCCCCCCCC
Q 001847 896 YGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK----KHPFFKGVN 965 (1005)
Q Consensus 896 tG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL----~hpff~~~~ 965 (1005)
+...||.+... -.|+.+.+.+|..+.++..+.+||..||+.||++||+.-++..++. .+.++.++.
T Consensus 253 y~t~PFe~sg~----laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~~~~~~~ 322 (738)
T KOG1989|consen 253 YFTTPFEESGK----LAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKPCPIPDIY 322 (738)
T ss_pred HhCCCcCcCcc----eeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCCCCccccc
Confidence 99999977532 3577889999999999999999999999999999999544433332 344555443
No 175
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=2.4e-35 Score=321.71 Aligned_cols=254 Identities=28% Similarity=0.452 Sum_probs=216.0
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
++|++.+.||.|+||.||+|.+..+++.+++|.+... .......+.+|+.++++++||||+++++++...+.+|++|
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~ 79 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLE---PGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVM 79 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcC---chhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEE
Confidence 5899999999999999999999889999999999754 2335677889999999999999999999999999999999
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 831 (1005)
||+.+++|.+++... ...+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++......
T Consensus 80 e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~---- 154 (262)
T cd06613 80 EYCGGGSLQDIYQVT-RGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTAT---- 154 (262)
T ss_pred eCCCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhh----
Confidence 999999999998764 245899999999999999999999999999999999999999999999999988543210
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC---CCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001847 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA---GHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 908 (1005)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~---~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~ 908 (1005)
........++..|+|||.+... .++.++|||||||++|+|++|..||.+.....
T Consensus 155 -----------------------~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~ 211 (262)
T cd06613 155 -----------------------IAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMR 211 (262)
T ss_pred -----------------------hhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 0111234688899999998776 78889999999999999999999998877666
Q ss_pred HHHHHHhCCCCCCC---CCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCC
Q 001847 909 TFANILHKDLKFPS---STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 960 (1005)
Q Consensus 909 ~~~~i~~~~~~~~~---~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpf 960 (1005)
....+....+..+. ....+..+.+||.+||..+|..||+ +.+++.|+|
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~il~~~~ 262 (262)
T cd06613 212 ALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPT----ATKLLQHPF 262 (262)
T ss_pred HHHHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCC----HHHHhcCCC
Confidence 65555544332221 2234678899999999999999999 999999998
No 176
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=1e-35 Score=325.39 Aligned_cols=257 Identities=28% Similarity=0.453 Sum_probs=216.2
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
++|++.+.||.|++|.||++.+..+++.+++|.+.... .......+.+|+++++.+.||||+++++++...+..|++|
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEI--NEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICM 78 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEeccc--ChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEE
Confidence 36899999999999999999999999999999987653 2345567889999999999999999999999999999999
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~-~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 830 (1005)
||+.+++|.+++.... ..+++..+..++.||+.+|+|||+ .|++|+||||+||+++.++.++|+|||.+......
T Consensus 79 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~--- 154 (265)
T cd06605 79 EYMDGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNS--- 154 (265)
T ss_pred EecCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHH---
Confidence 9999999999997643 568999999999999999999999 99999999999999999999999999987432110
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC-----C
Q 001847 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK-----T 905 (1005)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~-----~ 905 (1005)
......++..|+|||.+.+..++.++|||||||++|+|++|..||... .
T Consensus 155 --------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~ 208 (265)
T cd06605 155 --------------------------LAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDG 208 (265)
T ss_pred --------------------------HhhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccccccc
Confidence 001156888999999998888999999999999999999999999654 2
Q ss_pred hHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCC
Q 001847 906 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 964 (1005)
Q Consensus 906 ~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~ 964 (1005)
.......+.............+..+.+||.+||..+|.+||+ +.+++.||||+..
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~ll~~~~~~~~ 263 (265)
T cd06605 209 IFELLQYIVNEPPPRLPSGKFSPDFQDFVNLCLIKDPRERPS----YKELLEHPFIKKY 263 (265)
T ss_pred HHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHcCCCchhCcC----HHHHhhCchhhcc
Confidence 233344444433222222226788999999999999999999 9999999999863
No 177
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-36 Score=288.56 Aligned_cols=259 Identities=24% Similarity=0.427 Sum_probs=219.6
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
..|..+++||+|.||+||++++..++..||+|.++.+.. +........+|+.+++.++|.|||++++....+..+-+|+
T Consensus 2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrlddd-degvpssalreicllkelkhknivrl~dvlhsdkkltlvf 80 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_pred cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCC-CCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeH
Confidence 468889999999999999999999999999999986532 3344567788999999999999999999999999999999
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 831 (1005)
||| ..+|..++..- .+.++.+.++.++.|+++||.|+|++++.||||||.|+||+.+|.+||.|||+++..+..
T Consensus 81 e~c-dqdlkkyfdsl-ng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgip---- 154 (292)
T KOG0662|consen 81 EFC-DQDLKKYFDSL-NGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIP---- 154 (292)
T ss_pred HHh-hHHHHHHHHhc-CCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCc----
Confidence 999 77898888754 356999999999999999999999999999999999999999999999999999765422
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCC-CCChhhHHHHHHHHHHHH-cCCCCCCCCChHHH
Q 001847 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEML-YGYTPFRGKTRQKT 909 (1005)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~-~~~~sDIwSlGvll~eLl-tG~~Pf~~~~~~~~ 909 (1005)
.+-.+..+.|.+|++|.++.+.. |+...|+||.||++.|+. .|.+.|+|.+..++
T Consensus 155 -----------------------vrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddq 211 (292)
T KOG0662|consen 155 -----------------------VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQ 211 (292)
T ss_pred -----------------------eEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHH
Confidence 12234457899999999998864 677899999999999999 59999999998888
Q ss_pred HHHHHhC-----CCCCCCC----------------------CCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCC
Q 001847 910 FANILHK-----DLKFPSS----------------------TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 962 (1005)
Q Consensus 910 ~~~i~~~-----~~~~~~~----------------------~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~ 962 (1005)
+++|... .-.||.. +.++...++|++++|..+|.+|++ ++++++||||.
T Consensus 212 lkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qris----aeaalqhpyf~ 287 (292)
T KOG0662|consen 212 LKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRIS----AEAALQHPYFS 287 (292)
T ss_pred HHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccC----HHHHhcCcccc
Confidence 8888652 1112211 112334579999999999999999 99999999998
Q ss_pred CC
Q 001847 963 GV 964 (1005)
Q Consensus 963 ~~ 964 (1005)
..
T Consensus 288 d~ 289 (292)
T KOG0662|consen 288 DF 289 (292)
T ss_pred cc
Confidence 64
No 178
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1.4e-35 Score=328.05 Aligned_cols=256 Identities=27% Similarity=0.454 Sum_probs=210.2
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 752 (1005)
.|++++.||.|++|.||+|.+..+++.||||.+..... .......+.+|++++++++||||+++++++...+..|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 79 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEcccccc-ccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEee
Confidence 48899999999999999999999999999998875422 22334577889999999999999999999999999999999
Q ss_pred ccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001847 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (1005)
Q Consensus 753 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 832 (1005)
|+. ++|..++.......+++..+..++.||+.||+|||+.|++|+||+|+||+++.++.+||+|||++.......
T Consensus 80 ~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~---- 154 (284)
T cd07860 80 FLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---- 154 (284)
T ss_pred ccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCc----
Confidence 994 689888876555678999999999999999999999999999999999999999999999999875432110
Q ss_pred CcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCC-CCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001847 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 911 (1005)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~-~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~ 911 (1005)
.......+++.|+|||++.+.. ++.++|||||||++|+|++|+.||.+.+......
T Consensus 155 -----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~ 211 (284)
T cd07860 155 -----------------------RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 211 (284)
T ss_pred -----------------------cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
Confidence 0112235688999999887644 5789999999999999999999998876655444
Q ss_pred HHHhCCC------------------CCCC---------CCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCC
Q 001847 912 NILHKDL------------------KFPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 961 (1005)
Q Consensus 912 ~i~~~~~------------------~~~~---------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff 961 (1005)
.+..... .++. ...++.++.+||.+||+.||.+||+ +.++++||||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~~~l~~~~f 284 (284)
T cd07860 212 RIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRIS----AKAALAHPFF 284 (284)
T ss_pred HHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCC----HHHHhcCCCC
Confidence 4332100 0000 1235778899999999999999999 9999999998
No 179
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.4e-37 Score=340.95 Aligned_cols=248 Identities=27% Similarity=0.434 Sum_probs=209.8
Q ss_pred cccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCCc
Q 001847 679 PLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGE 758 (1005)
Q Consensus 679 ~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ggs 758 (1005)
+||.|.||+||.++|..+...+|||.+... +....+.+..||.+-+.|+|.|||++++++..++++-|.||-++||+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpek---dsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGS 658 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEK---DSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGS 658 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccc---cchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCc
Confidence 489999999999999999999999988643 44566788899999999999999999999999999999999999999
Q ss_pred hhhHHhhCCCCCC--CHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEe-cCCcEEEEeccCCcccCCCCCCCCCcc
Q 001847 759 LFLLLDRQPTKVL--KEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ-GNGHVSLTDFDLSCLTSCKPQLLLPTT 835 (1005)
Q Consensus 759 L~~~l~~~~~~~l--~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~-~~g~vkL~DFG~a~~~~~~~~~~~~~~ 835 (1005)
|.++++... +++ ++..+..+.+||++||.|||.+.|||||||-+||||+ -.|.+||+|||.++...
T Consensus 659 LSsLLrskW-GPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLA---------- 727 (1226)
T KOG4279|consen 659 LSSLLRSKW-GPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLA---------- 727 (1226)
T ss_pred HHHHHHhcc-CCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhc----------
Confidence 999998653 456 7889999999999999999999999999999999997 57999999999885532
Q ss_pred hhhhhcccCCCCCcccccccccccccccCCcccccccccCC--CCCChhhHHHHHHHHHHHHcCCCCCCCCChHH-HHHH
Q 001847 836 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA--GHTSAVDWWALGILLYEMLYGYTPFRGKTRQK-TFAN 912 (1005)
Q Consensus 836 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~--~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~-~~~~ 912 (1005)
+.+....++.||..|||||++..+ .|+.++|||||||++.||.||++||....... .+.+
T Consensus 728 -----------------ginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFk 790 (1226)
T KOG4279|consen 728 -----------------GINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFK 790 (1226)
T ss_pred -----------------cCCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhh
Confidence 122334567899999999999765 57789999999999999999999997643322 2222
Q ss_pred H--HhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCC
Q 001847 913 I--LHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 963 (1005)
Q Consensus 913 i--~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~ 963 (1005)
+ .+..++.| ..++.+++.||.+|+.+||..||+ |++||+.||++.
T Consensus 791 VGmyKvHP~iP--eelsaeak~FilrcFepd~~~R~s----A~~LL~DpFlq~ 837 (1226)
T KOG4279|consen 791 VGMYKVHPPIP--EELSAEAKNFILRCFEPDPCDRPS----AKDLLQDPFLQH 837 (1226)
T ss_pred hcceecCCCCc--HHHHHHHHHHHHHHcCCCcccCcc----HHHhccCccccc
Confidence 2 12223333 346888999999999999999999 999999999985
No 180
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=4.1e-35 Score=320.99 Aligned_cols=260 Identities=25% Similarity=0.367 Sum_probs=212.8
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccc--cChHHHHHHHHHHHHHHhCCCCCcceEEEEEEe--CCeE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--LNRNKVHRACAEREILDMLDHPFVPALYASFQT--KTHV 747 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~--~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~~~~ 747 (1005)
..|++.+.||+|+||.||++.+..++..|++|.+..... ........+.+|+.+++.++||||+++++++.. ...+
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 479999999999999999999999999999998864321 123445678889999999999999999999876 3578
Q ss_pred EEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001847 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (1005)
Q Consensus 748 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 827 (1005)
++||||+++++|.+++... ..+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++......
T Consensus 82 ~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~ 159 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSY--GALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTI 159 (265)
T ss_pred EEEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCccccccccc
Confidence 8999999999999998764 34889999999999999999999999999999999999999999999999988543211
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001847 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 907 (1005)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~ 907 (1005)
.. .........|+..|+|||++.+..++.++|||||||++|+|++|+.||......
T Consensus 160 ~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~ 215 (265)
T cd06652 160 CL------------------------SGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAM 215 (265)
T ss_pred cc------------------------cccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchH
Confidence 00 001112346889999999998888899999999999999999999999877665
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCC
Q 001847 908 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 962 (1005)
Q Consensus 908 ~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~ 962 (1005)
..+..+.............+..+.++|.+||. +|.+||+ ++++++|||+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~----~~~il~~~~~~ 265 (265)
T cd06652 216 AAIFKIATQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPS----ADELLRHTFVH 265 (265)
T ss_pred HHHHHHhcCCCCCCCchhhCHHHHHHHHHHhc-ChhhCCC----HHHHhcCcccC
Confidence 55555443322222223456788999999995 9999999 99999999984
No 181
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=2.5e-35 Score=323.21 Aligned_cols=254 Identities=19% Similarity=0.268 Sum_probs=209.2
Q ss_pred cccCCccccccccccCcEEEEEEEEc---CCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 001847 669 INLQHFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 745 (1005)
Q Consensus 669 i~~~~y~~~~~LG~G~~g~Vy~a~~~---~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 745 (1005)
+...+|++.+.||+|+||.||++.+. ..+..+|+|.++... .......+.+|+.++++++||||+++++++...+
T Consensus 2 i~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 79 (266)
T cd05064 2 LDNKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC--SDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGN 79 (266)
T ss_pred CchHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC--CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCC
Confidence 44568999999999999999999874 346789999987642 2334467888999999999999999999999999
Q ss_pred eEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 001847 746 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 825 (1005)
Q Consensus 746 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~ 825 (1005)
.+|+||||+++++|.+++.... ..+++..++.++.||+.||+|||++|++||||||+|||++.++.++|+|||.+....
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~ 158 (266)
T cd05064 80 TMMIVTEYMSNGALDSFLRKHE-GQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDK 158 (266)
T ss_pred CcEEEEEeCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCccccccc
Confidence 9999999999999999987643 458999999999999999999999999999999999999999999999999764321
Q ss_pred CCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCC
Q 001847 826 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGK 904 (1005)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~Pf~~~ 904 (1005)
... ........++..|+|||.+.+..++.++|||||||++|++++ |..||.+.
T Consensus 159 ~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~ 212 (266)
T cd05064 159 SEA--------------------------IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDM 212 (266)
T ss_pred ccc--------------------------hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcC
Confidence 100 000112235678999999988889999999999999999775 99999988
Q ss_pred ChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHH
Q 001847 905 TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 956 (1005)
Q Consensus 905 ~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL 956 (1005)
........+..+ ...+....++..+.+++.+||+.+|.+||+ +.+|+
T Consensus 213 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~c~~~~p~~RP~----~~~i~ 259 (266)
T cd05064 213 SGQDVIKAVEDG-FRLPAPRNCPNLLHQLMLDCWQKERGERPR----FSQIH 259 (266)
T ss_pred CHHHHHHHHHCC-CCCCCCCCCCHHHHHHHHHHcCCCchhCCC----HHHHH
Confidence 777766665543 333444557888999999999999999999 55554
No 182
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=2.4e-35 Score=326.02 Aligned_cols=258 Identities=24% Similarity=0.389 Sum_probs=213.6
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCC-----eEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 001847 669 INLQHFRPIKPLGSGDTGSVHLVELCGSG-----QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 743 (1005)
Q Consensus 669 i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~-----~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 743 (1005)
+...+|++++.||+|+||.||++.+...+ ..+++|.+.... .......+.+|+.+++.++||||+++++++..
T Consensus 2 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~--~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~ 79 (283)
T cd05048 2 IPLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA--EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTK 79 (283)
T ss_pred CChHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC--CHHHHHHHHHHHHHHHhcCCcccceEEEEEcC
Confidence 34568999999999999999999986655 689999887542 33445678899999999999999999999999
Q ss_pred CCeEEEEEeccCCCchhhHHhhCCC--------------CCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEec
Q 001847 744 KTHVCLITDYCPGGELFLLLDRQPT--------------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG 809 (1005)
Q Consensus 744 ~~~~~lV~E~~~ggsL~~~l~~~~~--------------~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~ 809 (1005)
....|++|||+++++|.+++..... ..++...+..++.||+.||.|||++|++|+||||+||++++
T Consensus 80 ~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~ 159 (283)
T cd05048 80 EQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGE 159 (283)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcC
Confidence 8999999999999999999875321 45788999999999999999999999999999999999999
Q ss_pred CCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHH
Q 001847 810 NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGI 889 (1005)
Q Consensus 810 ~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGv 889 (1005)
++.++|+|||++........ ........+++.|+|||.+....++.++|||||||
T Consensus 160 ~~~~~L~dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~ 214 (283)
T cd05048 160 GLTVKISDFGLSRDIYSADY-------------------------YRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGV 214 (283)
T ss_pred CCcEEECCCcceeecccccc-------------------------ccccCCCcccccccCHHHhccCcCchhhhHHHHHH
Confidence 99999999999854321110 01112335678999999998888999999999999
Q ss_pred HHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcC
Q 001847 890 LLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 958 (1005)
Q Consensus 890 ll~eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~h 958 (1005)
++|+|++ |..||.+....+....+..+.. .+....++..+.+|+.+||+.||.+||+ +.+++++
T Consensus 215 il~el~~~g~~p~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~l~~~c~~~~p~~Rp~----~~~i~~~ 279 (283)
T cd05048 215 VLWEIFSYGLQPYYGFSNQEVIEMIRSRQL-LPCPEDCPARVYALMIECWNEIPARRPR----FKDIHTR 279 (283)
T ss_pred HHHHHHcCCCCCCCCCCHHHHHHHHHcCCc-CCCcccCCHHHHHHHHHHccCChhhCcC----HHHHHHH
Confidence 9999997 9999998887777666655433 2333457889999999999999999999 7776653
No 183
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=4.4e-35 Score=359.68 Aligned_cols=151 Identities=39% Similarity=0.653 Sum_probs=138.9
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 750 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 750 (1005)
+++|++++.||+|+||.||+|.+..+++.||||+++............+..|+.++..++|+||++++.++...+++|+|
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 46899999999999999999999989999999999876555556667888999999999999999999999999999999
Q ss_pred EeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcc
Q 001847 751 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 823 (1005)
Q Consensus 751 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~ 823 (1005)
|||+.+++|.+++... +.+++..++.|+.||+.||.|||.+||+||||||+|||++.++.+||+|||++..
T Consensus 83 mEy~~g~~L~~li~~~--~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~~ 153 (669)
T cd05610 83 MEYLIGGDVKSLLHIY--GYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSKV 153 (669)
T ss_pred EeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCcc
Confidence 9999999999998764 4588999999999999999999999999999999999999999999999999863
No 184
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=3.5e-35 Score=319.53 Aligned_cols=252 Identities=26% Similarity=0.476 Sum_probs=215.3
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 752 (1005)
+|++.+.||.|+||.||++.+..+++.||+|.++... .......+.+|+.+++.++|+||+++++++...+.+|+|||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 78 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPK--SSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVME 78 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCc--chHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEe
Confidence 5889999999999999999999999999999986532 23455677889999999999999999999999999999999
Q ss_pred ccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001847 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (1005)
Q Consensus 753 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 832 (1005)
|+++++|.+++.......+++..+..++.||+.||.|||++||+|+||||+||++++++.++|+|||.+......
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~----- 153 (255)
T cd08219 79 YCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSP----- 153 (255)
T ss_pred eCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeeccc-----
Confidence 999999999987655566899999999999999999999999999999999999999999999999988543211
Q ss_pred CcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001847 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 912 (1005)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~~ 912 (1005)
........|++.|+|||++.+..++.++|+||||+++|+|++|..||...+.......
T Consensus 154 ----------------------~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~ 211 (255)
T cd08219 154 ----------------------GAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILK 211 (255)
T ss_pred ----------------------ccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHH
Confidence 0111234688999999999888899999999999999999999999998777666666
Q ss_pred HHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcC
Q 001847 913 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 958 (1005)
Q Consensus 913 i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~h 958 (1005)
+..+.... .....+..+.+||.+||..||++||+ +.+++.-
T Consensus 212 ~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rp~----~~~il~~ 252 (255)
T cd08219 212 VCQGSYKP-LPSHYSYELRSLIKQMFKRNPRSRPS----ATTILSR 252 (255)
T ss_pred HhcCCCCC-CCcccCHHHHHHHHHHHhCCcccCCC----HHHHhhc
Confidence 65554332 22346788999999999999999999 7887764
No 185
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-37 Score=337.09 Aligned_cols=250 Identities=26% Similarity=0.426 Sum_probs=214.4
Q ss_pred cccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 001847 667 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 746 (1005)
Q Consensus 667 ~~i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 746 (1005)
|+|......-++.||+|+.|.||+++. .++.||||.++. .-..+|+-|++|+||||+.+.++|.....
T Consensus 119 WeiPFe~IsELeWlGSGaQGAVF~Grl--~netVAVKKV~e----------lkETdIKHLRkLkH~NII~FkGVCtqsPc 186 (904)
T KOG4721|consen 119 WEIPFEEISELEWLGSGAQGAVFLGRL--HNETVAVKKVRE----------LKETDIKHLRKLKHPNIITFKGVCTQSPC 186 (904)
T ss_pred ccCCHHHhhhhhhhccCcccceeeeec--cCceehhHHHhh----------hhhhhHHHHHhccCcceeeEeeeecCCce
Confidence 445555666678899999999999997 677899997652 22357889999999999999999999999
Q ss_pred EEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 001847 747 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 826 (1005)
Q Consensus 747 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~ 826 (1005)
+|||||||..|-|..+|+.. ..++...+..|.++|+.|+.|||.+.|||||||.-||||+.+..|||+|||.++....
T Consensus 187 yCIiMEfCa~GqL~~VLka~--~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~ 264 (904)
T KOG4721|consen 187 YCIIMEFCAQGQLYEVLKAG--RPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSD 264 (904)
T ss_pred eEEeeeccccccHHHHHhcc--CccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhh
Confidence 99999999999999999864 5688999999999999999999999999999999999999999999999998855331
Q ss_pred CCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001847 827 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 906 (1005)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~ 906 (1005)
. ...-+++||..|||||++...+.+.++|||||||+||||+||..||..-+.
T Consensus 265 ~----------------------------STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVds 316 (904)
T KOG4721|consen 265 K----------------------------STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDS 316 (904)
T ss_pred h----------------------------hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccch
Confidence 1 112357899999999999999999999999999999999999999988776
Q ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCC
Q 001847 907 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 962 (1005)
Q Consensus 907 ~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~ 962 (1005)
..++.-+-..-+.+|....++.-++=||+.||.-.|.+||+ ..++|.|-=+.
T Consensus 317 sAIIwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPS----Frqil~HldIa 368 (904)
T KOG4721|consen 317 SAIIWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPS----FRQILLHLDIA 368 (904)
T ss_pred heeEEeccCCcccccCcccCchHHHHHHHHHHhcCCCCCcc----HHHHHHHHhhc
Confidence 66655554555667777778888999999999999999999 77888875333
No 186
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=2.5e-35 Score=323.61 Aligned_cols=256 Identities=28% Similarity=0.435 Sum_probs=211.8
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCC----
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKT---- 745 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~---- 745 (1005)
.++|++.+.||.|++|.||+|.+..+++.+++|++.... .....+.+|+.+++++ +|+||+++++++....
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE----DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGN 80 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc----hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCc
Confidence 468999999999999999999998899999999987542 2345778899999999 7999999999997544
Q ss_pred --eEEEEEeccCCCchhhHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCC
Q 001847 746 --HVCLITDYCPGGELFLLLDRQP--TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 821 (1005)
Q Consensus 746 --~~~lV~E~~~ggsL~~~l~~~~--~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a 821 (1005)
.+|+||||+.+++|.+++.... ...+++..++.++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~ 160 (275)
T cd06608 81 DDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVS 160 (275)
T ss_pred ceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccc
Confidence 5899999999999999987532 456899999999999999999999999999999999999999999999999987
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-----CCCChhhHHHHHHHHHHHHc
Q 001847 822 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-----GHTSAVDWWALGILLYEMLY 896 (1005)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-----~~~~~sDIwSlGvll~eLlt 896 (1005)
...... ........|++.|+|||++... .++.++|||||||++|+|++
T Consensus 161 ~~~~~~---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~ 213 (275)
T cd06608 161 AQLDST---------------------------LGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELAD 213 (275)
T ss_pred eecccc---------------------------hhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHh
Confidence 543210 0111234689999999987542 35678999999999999999
Q ss_pred CCCCCCCCChHHHHHHHHhCCCC-CCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCC
Q 001847 897 GYTPFRGKTRQKTFANILHKDLK-FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 961 (1005)
Q Consensus 897 G~~Pf~~~~~~~~~~~i~~~~~~-~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff 961 (1005)
|+.||...........+...... .......+..+.+||.+||..||++||| +.++++|||+
T Consensus 214 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt----~~~ll~~~~~ 275 (275)
T cd06608 214 GKPPLCDMHPMRALFKIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPF----MEELLEHPFI 275 (275)
T ss_pred CCCCccccchHHHHHHhhccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcC----HHHHhcCCCC
Confidence 99999876665555555544322 2222235678999999999999999999 9999999996
No 187
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=1.4e-35 Score=329.95 Aligned_cols=268 Identities=28% Similarity=0.470 Sum_probs=221.1
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
+.|.....||.|+||.||++.+..++..||||.+... .......+.+|+.+++.++|+||+++++.+...+..|+||
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~ 98 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLR---KQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVM 98 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecc---hHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEE
Confidence 3566677899999999999999889999999988643 2344566888999999999999999999999999999999
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 831 (1005)
||+++++|.+++.. ..+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||++......
T Consensus 99 e~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~---- 171 (292)
T cd06658 99 EFLEGGALTDIVTH---TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKE---- 171 (292)
T ss_pred eCCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccc----
Confidence 99999999998854 34889999999999999999999999999999999999999999999999987532211
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001847 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 911 (1005)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~ 911 (1005)
........|++.|+|||.+.+..++.++||||||+++|+|++|+.||........+.
T Consensus 172 -----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~ 228 (292)
T cd06658 172 -----------------------VPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMR 228 (292)
T ss_pred -----------------------cccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 011123468899999999988888999999999999999999999998877666555
Q ss_pred HHHhCC-CCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCChhhhhhcCCCCCCCCCCCC
Q 001847 912 NILHKD-LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFAT 984 (1005)
Q Consensus 912 ~i~~~~-~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~~~~~~~~~~~~~~~p~~~~ 984 (1005)
.+.... ...+.....+..+.+|+.+||..||.+||| ++++++||||... .+|...+|++..
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~~il~~~~~~~~--------~~~~~~~~~~~~ 290 (292)
T cd06658 229 RIRDNLPPRVKDSHKVSSVLRGFLDLMLVREPSQRAT----AQELLQHPFLKLA--------GPPSCIVPLMRQ 290 (292)
T ss_pred HHHhcCCCccccccccCHHHHHHHHHHccCChhHCcC----HHHHhhChhhhcc--------CCccccchhhhh
Confidence 443321 222233346788999999999999999999 9999999999963 344445565543
No 188
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=2.4e-35 Score=337.23 Aligned_cols=255 Identities=26% Similarity=0.495 Sum_probs=208.7
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC------
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 744 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------ 744 (1005)
.++|++++.||+|+||.||++.+..+++.||+|.+.... ........+.+|+.++++++|+||++++++|...
T Consensus 15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPF-QNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccc-cChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 478999999999999999999999999999999986542 2334456677899999999999999999988643
Q ss_pred CeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCccc
Q 001847 745 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 824 (1005)
Q Consensus 745 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~ 824 (1005)
...|+||||+ +++|.+.+... ++...+..++.||+.||+|||++||+||||||+||+++.++.+||+|||++...
T Consensus 94 ~~~~lv~e~~-~~~l~~~~~~~----l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~ 168 (353)
T cd07850 94 QDVYLVMELM-DANLCQVIQMD----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 168 (353)
T ss_pred CcEEEEEecc-CCCHHHHHhhc----CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeC
Confidence 3579999999 56888887643 889999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001847 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 904 (1005)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~ 904 (1005)
.... ......+++.|+|||.+.+..++.++|||||||++|+|++|+.||...
T Consensus 169 ~~~~----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~ 220 (353)
T cd07850 169 GTSF----------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGT 220 (353)
T ss_pred CCCC----------------------------CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCC
Confidence 2110 012245788999999999989999999999999999999999999877
Q ss_pred ChHHHHHHHHhC----------------------CC--------------CCCC-----CCCCCHHHHHHHHHccccCcC
Q 001847 905 TRQKTFANILHK----------------------DL--------------KFPS-----STPTSLHAKQLMYRLLHRDPK 943 (1005)
Q Consensus 905 ~~~~~~~~i~~~----------------------~~--------------~~~~-----~~~~s~~l~~Ll~~~L~~dP~ 943 (1005)
+....+..+... .. .++. ....+..+.+||.+||+.||.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 300 (353)
T cd07850 221 DHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPE 300 (353)
T ss_pred CHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChh
Confidence 655444433221 00 0000 012355688999999999999
Q ss_pred ccCCChhcHHHHHcCCCCCC
Q 001847 944 SRLGSHEGANEIKKHPFFKG 963 (1005)
Q Consensus 944 ~Rpt~~~~a~elL~hpff~~ 963 (1005)
+||+ +.++|.||||+.
T Consensus 301 ~R~t----~~eiL~~~~~~~ 316 (353)
T cd07850 301 KRIS----VDDALQHPYINV 316 (353)
T ss_pred hCcC----HHHHhcChhHhh
Confidence 9999 999999999984
No 189
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.7e-35 Score=326.03 Aligned_cols=258 Identities=25% Similarity=0.428 Sum_probs=215.3
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 001847 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 748 (1005)
Q Consensus 669 i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 748 (1005)
+..++|++++.||+|+||.||++.+..+++.||+|++.... .......+.+|+++++.++||||+++++++...+.+|
T Consensus 2 l~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 79 (284)
T cd06620 2 LRNEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA--KSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNIC 79 (284)
T ss_pred ccHHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC--cchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEE
Confidence 34578999999999999999999998899999999887542 2344577889999999999999999999999999999
Q ss_pred EEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001847 749 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (1005)
Q Consensus 749 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~-~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 827 (1005)
+||||+++++|.+++... +.++...+..++.+++.+|.|||+ .|++|+||+|+||+++.++.++|+|||++......
T Consensus 80 lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~ 157 (284)
T cd06620 80 MCMEFMDCGSLDRIYKKG--GPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS 157 (284)
T ss_pred EEEecCCCCCHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhh
Confidence 999999999999998764 458999999999999999999997 59999999999999999999999999987432100
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001847 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 907 (1005)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~ 907 (1005)
......|+..|+|||++.+..++.++|||||||++|+|++|..||......
T Consensus 158 -----------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~ 208 (284)
T cd06620 158 -----------------------------IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNID 208 (284)
T ss_pred -----------------------------ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchh
Confidence 012346899999999998888889999999999999999999999765431
Q ss_pred -----------HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCC
Q 001847 908 -----------KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 963 (1005)
Q Consensus 908 -----------~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~ 963 (1005)
.....+.............+..+.+|+.+||..||++||+ +.++++|+||..
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt----~~e~~~~~~~~~ 271 (284)
T cd06620 209 DDGQDDPMGILDLLQQIVQEPPPRLPSSDFPEDLRDFVDACLLKDPTERPT----PQQLCAMPPFIQ 271 (284)
T ss_pred hhhhhhhhHHHHHHHHHhhccCCCCCchhcCHHHHHHHHHHhcCCcccCcC----HHHHhcCccccc
Confidence 2223333332222122236778999999999999999999 999999999975
No 190
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=3e-35 Score=329.89 Aligned_cols=264 Identities=28% Similarity=0.390 Sum_probs=213.3
Q ss_pred ccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC--CeE
Q 001847 670 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--THV 747 (1005)
Q Consensus 670 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~--~~~ 747 (1005)
..++|++.+.||.|+||.||++.+..+|..||+|.++.... .........+|+.++++++|+||+++++++... +.+
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNE-RDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSI 83 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccC-CCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeE
Confidence 35689999999999999999999999999999999875422 122223456799999999999999999998754 568
Q ss_pred EEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001847 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (1005)
Q Consensus 748 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 827 (1005)
|+||||+. ++|.+++.... ..+++..+..++.||+.||.|||+.|++|+||||+||+++.++.+||+|||++......
T Consensus 84 ~lv~e~~~-~~l~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~ 161 (309)
T cd07845 84 FLVMEYCE-QDLASLLDNMP-TPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLP 161 (309)
T ss_pred EEEEecCC-CCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCc
Confidence 99999994 58888876542 45899999999999999999999999999999999999999999999999998553211
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001847 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTR 906 (1005)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~ 906 (1005)
. .......+++.|+|||.+.+ ..++.++|||||||++|+|++|+.||.+.+.
T Consensus 162 ~---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~ 214 (309)
T cd07845 162 A---------------------------KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSE 214 (309)
T ss_pred c---------------------------CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 0 01112245788999999865 4578899999999999999999999998887
Q ss_pred HHHHHHHHhCC-------------------CCCCC---------CCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcC
Q 001847 907 QKTFANILHKD-------------------LKFPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 958 (1005)
Q Consensus 907 ~~~~~~i~~~~-------------------~~~~~---------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~h 958 (1005)
...+..+.... ...+. ....+..+.+||.+||++||++||| +.++++|
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t----~~~il~h 290 (309)
T cd07845 215 IEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRAT----AEEALES 290 (309)
T ss_pred HHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcC----HHHHhcC
Confidence 77766655421 00000 0124678899999999999999999 9999999
Q ss_pred CCCCCCChh
Q 001847 959 PFFKGVNWA 967 (1005)
Q Consensus 959 pff~~~~~~ 967 (1005)
|||+.....
T Consensus 291 ~~f~~~~~~ 299 (309)
T cd07845 291 SYFKEKPLP 299 (309)
T ss_pred hhhccCCCC
Confidence 999965444
No 191
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.4e-36 Score=342.01 Aligned_cols=253 Identities=25% Similarity=0.385 Sum_probs=215.7
Q ss_pred cccccccccCcEEEEEEEEcCCCeEEEEEEeecc-cccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC--eEEEEE
Q 001847 675 RPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKG-VMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT--HVCLIT 751 (1005)
Q Consensus 675 ~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~-~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~--~~~lV~ 751 (1005)
+....||+|+|-+||+|.|..+|..||--.++.. ....+....++..|+.+|+.|+||||+++|+++.+.. .+-+|+
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT 122 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT 122 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence 4556799999999999999999988765444322 2345667799999999999999999999999998654 488999
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC--cccCCCCCCcEEEecC-CcEEEEeccCCcccCCCC
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQGN-GHVSLTDFDLSCLTSCKP 828 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~g--IvHrDLkP~NILi~~~-g~vkL~DFG~a~~~~~~~ 828 (1005)
|+|..|+|+.|+++. +.++...++.|++||+.||.|||++. |||||||.+||||+.+ |.|||+|+|+|......
T Consensus 123 EL~TSGtLr~Y~kk~--~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s- 199 (632)
T KOG0584|consen 123 ELFTSGTLREYRKKH--RRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS- 199 (632)
T ss_pred ecccCCcHHHHHHHh--ccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhcc-
Confidence 999999999999885 45899999999999999999999984 9999999999999966 89999999999664321
Q ss_pred CCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC-ChH
Q 001847 829 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK-TRQ 907 (1005)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~-~~~ 907 (1005)
...+.+|||.|||||.+. ..|+..+||||||+.++||+|+.+||... +..
T Consensus 200 ----------------------------~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~A 250 (632)
T KOG0584|consen 200 ----------------------------HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPA 250 (632)
T ss_pred ----------------------------ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHH
Confidence 123478999999999986 67899999999999999999999999875 556
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCC
Q 001847 908 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 964 (1005)
Q Consensus 908 ~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~ 964 (1005)
.+|+++..+..+-.-...-++++++||.+||.. ...|++ +.+||+||||..-
T Consensus 251 QIYKKV~SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~s----a~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 251 QIYKKVTSGIKPAALSKVKDPEVREFIEKCLAT-KSERLS----AKELLKDPFFDED 302 (632)
T ss_pred HHHHHHHcCCCHHHhhccCCHHHHHHHHHHhcC-chhccC----HHHHhhChhhccc
Confidence 777777777555444444578999999999999 899999 9999999999974
No 192
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.5e-35 Score=341.04 Aligned_cols=256 Identities=22% Similarity=0.318 Sum_probs=206.5
Q ss_pred cccCCccccccccccCcEEEEEEEEcCC-----CeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceEEEEEE
Q 001847 669 INLQHFRPIKPLGSGDTGSVHLVELCGS-----GQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQ 742 (1005)
Q Consensus 669 i~~~~y~~~~~LG~G~~g~Vy~a~~~~~-----~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~ 742 (1005)
+..++|++.+.||+|+||.||+|.+... +..||+|.++... .......+.+|+.+++.+ +|+||+++++++.
T Consensus 35 ~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~ 112 (374)
T cd05106 35 FPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASA--HTDEREALMSELKILSHLGQHKNIVNLLGACT 112 (374)
T ss_pred ccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCC--CHHHHHHHHHHHHHHHhhccCCceeeEeeEec
Confidence 4456899999999999999999987544 3579999987542 233456778899999999 8999999999999
Q ss_pred eCCeEEEEEeccCCCchhhHHhhCC-------------------------------------------------------
Q 001847 743 TKTHVCLITDYCPGGELFLLLDRQP------------------------------------------------------- 767 (1005)
Q Consensus 743 ~~~~~~lV~E~~~ggsL~~~l~~~~------------------------------------------------------- 767 (1005)
..+.+|+||||+.+|+|.+++....
T Consensus 113 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (374)
T cd05106 113 HGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSS 192 (374)
T ss_pred CCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccc
Confidence 9999999999999999999885421
Q ss_pred -------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCc
Q 001847 768 -------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPT 834 (1005)
Q Consensus 768 -------------~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~ 834 (1005)
...++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++........
T Consensus 193 ~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~----- 267 (374)
T cd05106 193 QSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSN----- 267 (374)
T ss_pred ccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcc-----
Confidence 12478889999999999999999999999999999999999999999999999854321100
Q ss_pred chhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHHHHHHH
Q 001847 835 TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANI 913 (1005)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~Pf~~~~~~~~~~~i 913 (1005)
........+++.|+|||++....++.++|||||||++|+|++ |+.||........+...
T Consensus 268 --------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~ 327 (374)
T cd05106 268 --------------------YVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKM 327 (374)
T ss_pred --------------------eeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHH
Confidence 001112335678999999988889999999999999999997 99999876655555555
Q ss_pred HhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhc
Q 001847 914 LHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 951 (1005)
Q Consensus 914 ~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~ 951 (1005)
.............+.++.+++.+||+.||.+||++.++
T Consensus 328 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l 365 (374)
T cd05106 328 VKRGYQMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQI 365 (374)
T ss_pred HHcccCccCCCCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 55444444444467899999999999999999994443
No 193
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=4.7e-35 Score=320.25 Aligned_cols=251 Identities=22% Similarity=0.310 Sum_probs=210.4
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 001847 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 748 (1005)
Q Consensus 669 i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 748 (1005)
+...+|.+.+.||+|++|.||++.+..+++.+++|.+... ......+.+|+.+++.++|+||+++++++...+.++
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 78 (263)
T cd05052 3 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 78 (263)
T ss_pred CchHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC----chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcE
Confidence 4456799999999999999999999999999999998643 233467888999999999999999999999999999
Q ss_pred EEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 001847 749 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 828 (1005)
Q Consensus 749 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~ 828 (1005)
+||||+++++|.+++.......++...++.++.|++.||+|||++|++|+||||+||++++++.+||+|||++.......
T Consensus 79 lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~ 158 (263)
T cd05052 79 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 158 (263)
T ss_pred EEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccce
Confidence 99999999999999976555568999999999999999999999999999999999999999999999999985432110
Q ss_pred CCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChH
Q 001847 829 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 907 (1005)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~Pf~~~~~~ 907 (1005)
. .......+++.|+|||.+.+..++.++|||||||++|+|++ |..||.+....
T Consensus 159 ~--------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~ 212 (263)
T cd05052 159 Y--------------------------TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 212 (263)
T ss_pred e--------------------------eccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH
Confidence 0 00112234668999999988889999999999999999998 99999887776
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChh
Q 001847 908 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 950 (1005)
Q Consensus 908 ~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~ 950 (1005)
+....+... .........+..+.+||.+||..+|++||++.+
T Consensus 213 ~~~~~~~~~-~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ 254 (263)
T cd05052 213 QVYELLEKG-YRMERPEGCPPKVYELMRACWQWNPSDRPSFAE 254 (263)
T ss_pred HHHHHHHCC-CCCCCCCCCCHHHHHHHHHHccCCcccCCCHHH
Confidence 665555443 333334457889999999999999999999444
No 194
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.8e-35 Score=326.13 Aligned_cols=257 Identities=30% Similarity=0.454 Sum_probs=212.5
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
++|++++.||+|+||.||++.+..++..||+|.+.... .......+.+|+.++++++|+||+++++++...+.+|+||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL--DESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCM 78 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEE
Confidence 36999999999999999999999899999999887532 3344567889999999999999999999999999999999
Q ss_pred eccCCCchhhHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHH-cCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 001847 752 DYCPGGELFLLLDRQP-TKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 829 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~-~~~l~~~~i~~i~~qil~aL~~LH~-~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~ 829 (1005)
||+++++|..++.... ...+++..+..++.||+.||.|||+ .||+|+||||+||+++.++.++|+|||++......
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-- 156 (286)
T cd06622 79 EYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS-- 156 (286)
T ss_pred eecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC--
Confidence 9999999998886531 2368999999999999999999997 59999999999999999999999999988432110
Q ss_pred CCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCC------CCChhhHHHHHHHHHHHHcCCCCCCC
Q 001847 830 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG------HTSAVDWWALGILLYEMLYGYTPFRG 903 (1005)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~------~~~~sDIwSlGvll~eLltG~~Pf~~ 903 (1005)
......+++.|+|||.+.+.. ++.++|||||||++|+|++|+.||..
T Consensus 157 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~ 209 (286)
T cd06622 157 ---------------------------LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPP 209 (286)
T ss_pred ---------------------------ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCC
Confidence 112335788999999985543 47799999999999999999999976
Q ss_pred CChHHHHHH---HHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCC
Q 001847 904 KTRQKTFAN---ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 964 (1005)
Q Consensus 904 ~~~~~~~~~---i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~ 964 (1005)
......... +.... .......++.++.+||.+||..+|++||+ +.+++.||||...
T Consensus 210 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~l~~~~~~~~~ 268 (286)
T cd06622 210 ETYANIFAQLSAIVDGD-PPTLPSGYSDDAQDFVAKCLNKIPNRRPT----YAQLLEHPWLVKY 268 (286)
T ss_pred cchhhHHHHHHHHhhcC-CCCCCcccCHHHHHHHHHHcccCcccCCC----HHHHhcChhhhhc
Confidence 554433332 22222 12222347889999999999999999999 9999999999875
No 195
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=4.8e-35 Score=327.48 Aligned_cols=254 Identities=24% Similarity=0.345 Sum_probs=203.0
Q ss_pred cCCccccccccccCcEEEEEEEEcC----------------CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCc
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCG----------------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFV 734 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~----------------~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnI 734 (1005)
.++|++.+.||+|+||.||+|.+.. ++..||+|.+.... .......+.+|+.++.+++||||
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~ni 81 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA--NKNARNDFLKEVKILSRLKDPNI 81 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCe
Confidence 4689999999999999999998632 34579999987542 34445678899999999999999
Q ss_pred ceEEEEEEeCCeEEEEEeccCCCchhhHHhhCCC-----------------CCCCHHHHHHHHHHHHHHHHHHHHcCccc
Q 001847 735 PALYASFQTKTHVCLITDYCPGGELFLLLDRQPT-----------------KVLKEDAVRFYAAEVVVALEYLHCQGIIY 797 (1005)
Q Consensus 735 v~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~-----------------~~l~~~~i~~i~~qil~aL~~LH~~gIvH 797 (1005)
+++++++...+..|+||||+.+++|.+++..... ..++...+..++.||+.||.|||+.||+|
T Consensus 82 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH 161 (304)
T cd05096 82 IRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVH 161 (304)
T ss_pred eEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 9999999999999999999999999999864311 23677889999999999999999999999
Q ss_pred CCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCC
Q 001847 798 RDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG 877 (1005)
Q Consensus 798 rDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 877 (1005)
|||||+|||++.++.+||+|||++....... .........++..|+|||++....
T Consensus 162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~ 216 (304)
T cd05096 162 RDLATRNCLVGENLTIKIADFGMSRNLYAGD-------------------------YYRIQGRAVLPIRWMAWECILMGK 216 (304)
T ss_pred cCcchhheEEcCCccEEECCCccceecccCc-------------------------eeEecCcCCCCccccCHHHHhcCC
Confidence 9999999999999999999999985432110 001122334678899999998888
Q ss_pred CCChhhHHHHHHHHHHHHc--CCCCCCCCChHHHHHHHHh---C---CCCCCCCCCCCHHHHHHHHHccccCcCccCCCh
Q 001847 878 HTSAVDWWALGILLYEMLY--GYTPFRGKTRQKTFANILH---K---DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH 949 (1005)
Q Consensus 878 ~~~~sDIwSlGvll~eLlt--G~~Pf~~~~~~~~~~~i~~---~---~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~ 949 (1005)
++.++|||||||++|+|++ +..||.+......+..+.. . .........++..+.+|+.+||..+|.+||+
T Consensus 217 ~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs-- 294 (304)
T cd05096 217 FTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPS-- 294 (304)
T ss_pred CCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcC--
Confidence 9999999999999999986 6778887666555444322 1 1112223456788999999999999999999
Q ss_pred hcHHHH
Q 001847 950 EGANEI 955 (1005)
Q Consensus 950 ~~a~el 955 (1005)
+.++
T Consensus 295 --~~~i 298 (304)
T cd05096 295 --FSDI 298 (304)
T ss_pred --HHHH
Confidence 6665
No 196
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=2.3e-35 Score=339.79 Aligned_cols=258 Identities=22% Similarity=0.323 Sum_probs=207.1
Q ss_pred cccCCccccccccccCcEEEEEEEE-----cCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceEEEEEE
Q 001847 669 INLQHFRPIKPLGSGDTGSVHLVEL-----CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQ 742 (1005)
Q Consensus 669 i~~~~y~~~~~LG~G~~g~Vy~a~~-----~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~ 742 (1005)
+..++|++.+.||+|+||.||+|.+ ..++..||+|+++... .......+.+|+.+++.+ +||||+++++++.
T Consensus 32 ~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~ 109 (375)
T cd05104 32 FPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHINIVNLLGACT 109 (375)
T ss_pred cchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCc--CcHHHHHHHHHHHHHHHhcCCcceeeeeeeec
Confidence 4456899999999999999999975 3457789999987542 233446788899999999 8999999999999
Q ss_pred eCCeEEEEEeccCCCchhhHHhhCC-------------------------------------------------------
Q 001847 743 TKTHVCLITDYCPGGELFLLLDRQP------------------------------------------------------- 767 (1005)
Q Consensus 743 ~~~~~~lV~E~~~ggsL~~~l~~~~------------------------------------------------------- 767 (1005)
..+..|+||||+++|+|.+++....
T Consensus 110 ~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 189 (375)
T cd05104 110 VGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSV 189 (375)
T ss_pred cCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccc
Confidence 9999999999999999999886421
Q ss_pred ------------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 001847 768 ------------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 829 (1005)
Q Consensus 768 ------------------~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~ 829 (1005)
...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++........
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 269 (375)
T cd05104 190 RSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSN 269 (375)
T ss_pred ccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCccc
Confidence 12478888999999999999999999999999999999999999999999999854321110
Q ss_pred CCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHH
Q 001847 830 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQK 908 (1005)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~Pf~~~~~~~ 908 (1005)
........++..|+|||++.+..++.++|||||||++|+|++ |..||.+.....
T Consensus 270 -------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~ 324 (375)
T cd05104 270 -------------------------YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS 324 (375)
T ss_pred -------------------------ccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH
Confidence 001112335678999999999899999999999999999997 999998765544
Q ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHc
Q 001847 909 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 957 (1005)
Q Consensus 909 ~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 957 (1005)
.....+............+.++.+|+.+||..||++||+ +.++++
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs----~~eil~ 369 (375)
T cd05104 325 KFYKMIKEGYRMLSPECAPSEMYDIMKSCWDADPLKRPT----FKQIVQ 369 (375)
T ss_pred HHHHHHHhCccCCCCCCCCHHHHHHHHHHccCChhHCcC----HHHHHH
Confidence 444454443333333345788999999999999999999 555553
No 197
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-36 Score=338.63 Aligned_cols=264 Identities=21% Similarity=0.276 Sum_probs=214.0
Q ss_pred cccccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 001847 665 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 744 (1005)
Q Consensus 665 ~~~~i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 744 (1005)
..|.|......+...||+|.||+||++.+-++ ||||++.... ..+...+.|.+|..++++-+|.||+.+.+++...
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whGd---VAVK~Lnv~~-pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p 460 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWHGD---VAVKLLNVDD-PTPEQLQAFKNEVAVLKKTRHENILLFMGACMNP 460 (678)
T ss_pred cccccCHHHhhccceeccccccceeecccccc---eEEEEEecCC-CCHHHHHHHHHHHHHHhhcchhhheeeehhhcCC
Confidence 34566777888999999999999999999554 9999998763 3556889999999999999999999999999998
Q ss_pred CeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCccc
Q 001847 745 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 824 (1005)
Q Consensus 745 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~ 824 (1005)
.. .||+.+|+|.+|+.++.... ..+.....+.|++||++|+.|||.++|||+|||..|||+.++++|||+|||++...
T Consensus 461 ~~-AIiTqwCeGsSLY~hlHv~e-tkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk 538 (678)
T KOG0193|consen 461 PL-AIITQWCEGSSLYTHLHVQE-TKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVK 538 (678)
T ss_pred ce-eeeehhccCchhhhhccchh-hhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeee
Confidence 87 99999999999999997653 56999999999999999999999999999999999999999999999999998432
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC---CCCCChhhHHHHHHHHHHHHcCCCCC
Q 001847 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG---AGHTSAVDWWALGILLYEMLYGYTPF 901 (1005)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~---~~~~~~sDIwSlGvll~eLltG~~Pf 901 (1005)
. .+ ..........|...|||||++.. .+|++.+|||||||++|||++|.+||
T Consensus 539 ~-------------~w------------~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPy 593 (678)
T KOG0193|consen 539 T-------------RW------------SGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPY 593 (678)
T ss_pred e-------------ee------------ccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCc
Confidence 1 00 01111223458889999999865 46888999999999999999999999
Q ss_pred CCCChHHHHHHHHhCCCCC---CCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCC
Q 001847 902 RGKTRQKTFANILHKDLKF---PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHP 959 (1005)
Q Consensus 902 ~~~~~~~~~~~i~~~~~~~---~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hp 959 (1005)
.......++..+-++.... .....++.++++|+..||.+++++||.+.+++..|+.++
T Consensus 594 si~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~ 654 (678)
T KOG0193|consen 594 SIQNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELL 654 (678)
T ss_pred CCCChhheEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhh
Confidence 9554444443333331111 122346778999999999999999999877666555443
No 198
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=4.2e-35 Score=320.01 Aligned_cols=250 Identities=22% Similarity=0.349 Sum_probs=209.8
Q ss_pred ccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001847 668 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 747 (1005)
Q Consensus 668 ~i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 747 (1005)
.+..++|++++.||+|++|.||++.+ .++..|++|.+.... .....+.+|+.+++.++|+||+++++++...+..
T Consensus 2 ~~~~~~~~~~~~lg~g~~g~v~~~~~-~~~~~v~iK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 76 (261)
T cd05072 2 EIPRESIKLVKKLGAGQFGEVWMGYY-NNSTKVAVKTLKPGT----MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPI 76 (261)
T ss_pred cCchHHeEEeeecCCcCCceEEEEEe-cCCceEEEEEccCCc----hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCc
Confidence 45667999999999999999999997 456779999876532 2356788899999999999999999999999999
Q ss_pred EEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001847 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (1005)
Q Consensus 748 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 827 (1005)
|++|||+.+++|.+++.......++...+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++......
T Consensus 77 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 156 (261)
T cd05072 77 YIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDN 156 (261)
T ss_pred EEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCC
Confidence 99999999999999997765567899999999999999999999999999999999999999999999999998553211
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCh
Q 001847 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 906 (1005)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~Pf~~~~~ 906 (1005)
.. .......++..|+|||++....++.++|||||||++|+|++ |..||.+...
T Consensus 157 ~~--------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~ 210 (261)
T cd05072 157 EY--------------------------TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSN 210 (261)
T ss_pred ce--------------------------eccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCH
Confidence 00 00112345678999999988888999999999999999998 9999988777
Q ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCCh
Q 001847 907 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH 949 (1005)
Q Consensus 907 ~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~ 949 (1005)
......+... ...+....++..+.+|+.+||..+|++||++.
T Consensus 211 ~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ 252 (261)
T cd05072 211 SDVMSALQRG-YRMPRMENCPDELYDIMKTCWKEKAEERPTFD 252 (261)
T ss_pred HHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHccCCcccCcCHH
Confidence 6666665543 34444455788999999999999999999933
No 199
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=6.8e-35 Score=323.21 Aligned_cols=255 Identities=27% Similarity=0.469 Sum_probs=216.1
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 752 (1005)
.|...+.||.|++|.||++.+..++..+++|.+... .......+.+|+.+++.++||||+++++++...+..|+|+|
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e 96 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLR---KQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVME 96 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEecc---chhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEe
Confidence 466668999999999999999889999999988643 23344567889999999999999999999999999999999
Q ss_pred ccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001847 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (1005)
Q Consensus 753 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 832 (1005)
|+.+++|.+++.. ..++...+..++.||+.||+|||++|++||||+|+||+++.++.++|+|||.+......
T Consensus 97 ~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~----- 168 (285)
T cd06648 97 FLEGGALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKE----- 168 (285)
T ss_pred ccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccC-----
Confidence 9999999999876 34899999999999999999999999999999999999999999999999987432210
Q ss_pred CcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001847 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 912 (1005)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~~ 912 (1005)
........|++.|+|||.+.+..++.++|||||||++|+|++|+.||...+.......
T Consensus 169 ----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~ 226 (285)
T cd06648 169 ----------------------VPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKR 226 (285)
T ss_pred ----------------------CcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHH
Confidence 0111234688999999999888889999999999999999999999988777666666
Q ss_pred HHhCCCCCCC-CCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCC
Q 001847 913 ILHKDLKFPS-STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 964 (1005)
Q Consensus 913 i~~~~~~~~~-~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~ 964 (1005)
+......... ...++..+.+|+.+||..+|++||+ +.++++||||+..
T Consensus 227 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt----~~~il~~~~~~~~ 275 (285)
T cd06648 227 IRDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQRAT----AAELLNHPFLAKA 275 (285)
T ss_pred HHhcCCCCCcccccCCHHHHHHHHHHcccChhhCcC----HHHHccCcccccC
Confidence 5554322222 2236788999999999999999999 9999999999874
No 200
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=3.6e-35 Score=321.57 Aligned_cols=261 Identities=23% Similarity=0.381 Sum_probs=212.2
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccC---hHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN---RNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 749 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~---~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 749 (1005)
+|+..+.||+|++|.||++.+..+++.+|+|.+....... ......+.+|+.+++.++|+||+++++++...+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 4788899999999999999999999999999987542211 2245678899999999999999999999999999999
Q ss_pred EEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCC-cEEEEeccCCcccCCCC
Q 001847 750 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-HVSLTDFDLSCLTSCKP 828 (1005)
Q Consensus 750 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g-~vkL~DFG~a~~~~~~~ 828 (1005)
||||+.+++|.+++... ..+++..+..++.||+.||.|||++|++|+||+|+||+++.++ .++|+|||.+.......
T Consensus 81 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~ 158 (268)
T cd06630 81 FVEWMAGGSVSHLLSKY--GAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKG 158 (268)
T ss_pred EEeccCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccccccccccccc
Confidence 99999999999999764 4589999999999999999999999999999999999998776 69999999985432110
Q ss_pred CCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001847 829 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 908 (1005)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~ 908 (1005)
. ..........|+..|+|||.+.+..++.++|+|||||++|+|++|..||.......
T Consensus 159 ~-----------------------~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~ 215 (268)
T cd06630 159 T-----------------------GAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSN 215 (268)
T ss_pred c-----------------------cCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcc
Confidence 0 00011223468899999999988888999999999999999999999997544322
Q ss_pred HHHHH---HhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCC
Q 001847 909 TFANI---LHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 962 (1005)
Q Consensus 909 ~~~~i---~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~ 962 (1005)
....+ .............+..+.+++.+||..+|.+||+ +.++++||||+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~----~~~ll~~~~~~ 268 (268)
T cd06630 216 HLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPP----SRELLKHPVFR 268 (268)
T ss_pred hHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcC----HHHHhcCcccC
Confidence 22222 2222222222346788999999999999999999 99999999985
No 201
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4e-36 Score=338.16 Aligned_cols=265 Identities=29% Similarity=0.485 Sum_probs=234.2
Q ss_pred ccccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 001847 666 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 745 (1005)
Q Consensus 666 ~~~i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 745 (1005)
..+.....|.+.+.||.|.|+.|.++.+..++..||||++.+..... .....+.+|+++|+.|+|||||+++.+.....
T Consensus 50 ~~~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~-~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~ 128 (596)
T KOG0586|consen 50 DDSNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNP-SKRQKLGREVDIMKSLNHPNIVKLFSVIETEA 128 (596)
T ss_pred cccccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccCh-HHHHHHHHHHHHHHhcCCcceeeeeeeeeecc
Confidence 34455678999999999999999999999999999999999875544 44455899999999999999999999999999
Q ss_pred eEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 001847 746 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 825 (1005)
Q Consensus 746 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~ 825 (1005)
.+|+||||+.+|.+++|+.++ +.+.+..++.++.|++.|++|||+++|||||||++|||++.+-++||+|||++....
T Consensus 129 ~lylV~eya~~ge~~~yl~~~--gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~ 206 (596)
T KOG0586|consen 129 TLYLVMEYASGGELFDYLVKH--GRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFD 206 (596)
T ss_pred eeEEEEEeccCchhHHHHHhc--ccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeec
Confidence 999999999999999999876 447889999999999999999999999999999999999999999999999985433
Q ss_pred CCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCC-CChhhHHHHHHHHHHHHcCCCCCCCC
Q 001847 826 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGK 904 (1005)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~-~~~sDIwSlGvll~eLltG~~Pf~~~ 904 (1005)
......+.||++.|.|||++.+..+ ++.+|+||||++||.|++|.+||.+.
T Consensus 207 ----------------------------~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~ 258 (596)
T KOG0586|consen 207 ----------------------------YGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQ 258 (596)
T ss_pred ----------------------------ccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCc
Confidence 2233457899999999999988765 56999999999999999999999999
Q ss_pred ChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCChh
Q 001847 905 TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 967 (1005)
Q Consensus 905 ~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~~~ 967 (1005)
+-.+.-...+.+.+.++.. ++-++.+||+++|..+|.+|++ ++++..|.|.....-.
T Consensus 259 ~lk~Lr~rvl~gk~rIp~~--ms~dce~lLrk~lvl~Pskr~~----~dqim~~~W~n~~~~~ 315 (596)
T KOG0586|consen 259 NLKELRPRVLRGKYRIPFY--MSCDCEDLLRKFLVLNPSKRGP----CDQIMKDRWRNDLLEA 315 (596)
T ss_pred ccccccchheeeeecccce--eechhHHHHHHhhccCccccCC----HHHhhhhcccchhhhh
Confidence 8888877888877766655 5667899999999999999999 9999999999864433
No 202
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=4.6e-35 Score=323.62 Aligned_cols=261 Identities=26% Similarity=0.391 Sum_probs=208.6
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHH-HHhCCCCCcceEEEEEEeCCeEEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREI-LDMLDHPFVPALYASFQTKTHVCLI 750 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~i-l~~l~hpnIv~l~~~~~~~~~~~lV 750 (1005)
++|++++.||+|+||.||++.+..+|+.||+|.+..... ......+..|+.+ ++.++||||+++++++...+.+|++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv 78 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVN--SQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWIC 78 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCC--cHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEE
Confidence 479999999999999999999999999999999876422 1223445556654 6667999999999999999999999
Q ss_pred EeccCCCchhhHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHc-CcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001847 751 TDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (1005)
Q Consensus 751 ~E~~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qil~aL~~LH~~-gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 827 (1005)
|||+ .++|.+++... ....+++..++.++.||+.||.|||++ +++||||||+||+++.++.+||+|||++......
T Consensus 79 ~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 157 (283)
T cd06617 79 MEVM-DTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDS 157 (283)
T ss_pred hhhh-cccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecccccccccc
Confidence 9999 57888777542 234689999999999999999999997 9999999999999999999999999998543210
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC----CCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001847 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG----AGHTSAVDWWALGILLYEMLYGYTPFRG 903 (1005)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~----~~~~~~sDIwSlGvll~eLltG~~Pf~~ 903 (1005)
.......|+..|+|||.+.+ ..++.++|+|||||++|+|++|+.||..
T Consensus 158 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~ 209 (283)
T cd06617 158 ----------------------------VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDS 209 (283)
T ss_pred ----------------------------cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCc
Confidence 01122457889999998865 3457899999999999999999999965
Q ss_pred C-ChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCChh
Q 001847 904 K-TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 967 (1005)
Q Consensus 904 ~-~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~~~ 967 (1005)
. ...+.+..+............++.++.+||.+||..+|.+||+ +.++++||||......
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~----~~~il~~~~~~~~~~~ 270 (283)
T cd06617 210 WKTPFQQLKQVVEEPSPQLPAEKFSPEFQDFVNKCLKKNYKERPN----YPELLQHPFFELHLSK 270 (283)
T ss_pred cccCHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcC----HHHHhcCchhhhcccc
Confidence 3 3334444444433222222346788999999999999999999 9999999999986433
No 203
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=5.8e-35 Score=318.87 Aligned_cols=258 Identities=29% Similarity=0.480 Sum_probs=219.4
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
++|++.+.||.|++|.||+|.+..+++.|++|.+..... ......+.+|+.++..++|+||+++++++...+..++||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 78 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGD--EEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVL 78 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcc--hHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEE
Confidence 368999999999999999999999999999999876532 245678889999999999999999999999999999999
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~-~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 830 (1005)
||+++++|.+++... ..+++..+..++.||+.||.|||+ .|++|+||+|+||+++.++.++|+|||++.......
T Consensus 79 e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~-- 154 (264)
T cd06623 79 EYMDGGSLADLLKKV--GKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTL-- 154 (264)
T ss_pred EecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCC--
Confidence 999999999999764 458999999999999999999999 999999999999999999999999999885432111
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC---hH
Q 001847 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT---RQ 907 (1005)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~---~~ 907 (1005)
.......++..|+|||.+....++.++|+||||+++|+|++|..||.... ..
T Consensus 155 -------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~ 209 (264)
T cd06623 155 -------------------------DQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFF 209 (264)
T ss_pred -------------------------CcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHH
Confidence 01123457889999999988888899999999999999999999997763 34
Q ss_pred HHHHHHHhCCCCCCCCCC-CCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCC
Q 001847 908 KTFANILHKDLKFPSSTP-TSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 965 (1005)
Q Consensus 908 ~~~~~i~~~~~~~~~~~~-~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~ 965 (1005)
.....+...... ..... ++..+.++|.+||..+|++||+ +.++++||||+.++
T Consensus 210 ~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~R~~----~~~ll~~~~~~~~~ 263 (264)
T cd06623 210 ELMQAICDGPPP-SLPAEEFSPEFRDFISACLQKDPKKRPS----AAELLQHPFIKKAD 263 (264)
T ss_pred HHHHHHhcCCCC-CCCcccCCHHHHHHHHHHccCChhhCCC----HHHHHhCHHHHhcc
Confidence 444444433322 22233 6788999999999999999999 99999999998764
No 204
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=7.4e-35 Score=326.49 Aligned_cols=257 Identities=27% Similarity=0.383 Sum_probs=215.8
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
..|++.+.||+|+||.||++.+..+++.||+|.+.............+.+|+.+++.++||||+++++++...+..|+||
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 46999999999999999999998899999999987554444555677889999999999999999999999999999999
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 831 (1005)
||+. ++|.+++... ...+++..+..++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++.....
T Consensus 95 e~~~-g~l~~~~~~~-~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~----- 167 (307)
T cd06607 95 EYCL-GSASDILEVH-KKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSP----- 167 (307)
T ss_pred HhhC-CCHHHHHHHc-ccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCC-----
Confidence 9995 6777776543 24589999999999999999999999999999999999999999999999998744211
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCccccccccc---CCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001847 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 908 (1005)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~---~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~ 908 (1005)
.....+++.|+|||++. ...++.++||||||+++|+|++|..||.+.+...
T Consensus 168 --------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~ 221 (307)
T cd06607 168 --------------------------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS 221 (307)
T ss_pred --------------------------CCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHH
Confidence 11245788999999874 3457789999999999999999999998877666
Q ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCC
Q 001847 909 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 965 (1005)
Q Consensus 909 ~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~ 965 (1005)
....+.............+..+.+||.+||..+|++||+ +.+++.||||....
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~il~~~~~~~~~ 274 (307)
T cd06607 222 ALYHIAQNDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPS----SEELLKHRFVLRER 274 (307)
T ss_pred HHHHHhcCCCCCCCchhhCHHHHHHHHHHhcCChhhCcC----HHHHhcChhhcccC
Confidence 555554443322222345778999999999999999999 99999999998743
No 205
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=6.7e-35 Score=321.71 Aligned_cols=258 Identities=28% Similarity=0.397 Sum_probs=217.5
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
..|+.++.||.|+||.||++.+..++..+|+|.+.... .......+.+|+.+++.+.|+||+++++++...+..|+||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEE--AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIM 81 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccc--cHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 36889999999999999999998899999999987542 2344577889999999999999999999999999999999
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 831 (1005)
||+.+++|.+++.. ..++...+..++.|++.||.|||+++++|+||+|+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~i~~---~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~--- 155 (277)
T cd06640 82 EYLGGGSALDLLRA---GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ--- 155 (277)
T ss_pred ecCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCc---
Confidence 99999999999865 348899999999999999999999999999999999999999999999999985432110
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001847 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 911 (1005)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~ 911 (1005)
.......++..|+|||++.+..++.++|+|||||++|+|++|..||.+........
T Consensus 156 ------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~ 211 (277)
T cd06640 156 ------------------------IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLF 211 (277)
T ss_pred ------------------------cccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhh
Confidence 01123457889999999988888999999999999999999999998877665554
Q ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCCh
Q 001847 912 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 966 (1005)
Q Consensus 912 ~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~~ 966 (1005)
.+.....+ ......+..+.+|+.+||..+|++||+ +.++++|+||.....
T Consensus 212 ~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~il~~~~~~~~~~ 261 (277)
T cd06640 212 LIPKNNPP-TLTGEFSKPFKEFIDACLNKDPSFRPT----AKELLKHKFIVKNAK 261 (277)
T ss_pred hhhcCCCC-CCchhhhHHHHHHHHHHcccCcccCcC----HHHHHhChHhhhcch
Confidence 44333221 112235678899999999999999999 999999999987543
No 206
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=9.7e-35 Score=315.94 Aligned_cols=255 Identities=30% Similarity=0.453 Sum_probs=214.2
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccc--cChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--LNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 750 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~--~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 750 (1005)
+|+..+.||+|++|.||++.+..++..|++|.+..... ........+.+|+.+++.++|+||+++++++.....+|++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 47888999999999999999988899999999875422 1234557788999999999999999999999999999999
Q ss_pred EeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001847 751 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (1005)
Q Consensus 751 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 830 (1005)
|||+++++|.+++... ..+++..+..++.||+.||+|||+.|++|+||+|+||+++.++.+||+|||++.......
T Consensus 81 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~-- 156 (258)
T cd06632 81 LELVPGGSLAKLLKKY--GSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS-- 156 (258)
T ss_pred EEecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceeccccc--
Confidence 9999999999999764 358899999999999999999999999999999999999999999999999875432110
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCC-CCChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001847 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 909 (1005)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~-~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~ 909 (1005)
......|++.|++||.+.... ++.++|+|||||++|+|++|..||........
T Consensus 157 --------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~ 210 (258)
T cd06632 157 --------------------------FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAA 210 (258)
T ss_pred --------------------------cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHH
Confidence 112346889999999987766 88899999999999999999999987665555
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCC
Q 001847 910 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 961 (1005)
Q Consensus 910 ~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff 961 (1005)
...+............++..+.+|+.+||..+|++||+ +.+++.|||+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~~l~~~~~ 258 (258)
T cd06632 211 VFKIGRSKELPPIPDHLSDEAKDFILKCLQRDPSLRPT----AAELLEHPFV 258 (258)
T ss_pred HHHHHhcccCCCcCCCcCHHHHHHHHHHhhcCcccCcC----HHHHhcCCCC
Confidence 54444322111222346788999999999999999999 9999999996
No 207
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=9.5e-35 Score=322.81 Aligned_cols=257 Identities=28% Similarity=0.386 Sum_probs=210.6
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeC-----
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTK----- 744 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~----- 744 (1005)
.++|.+.+.||+|+||.||++.+..+++.+|+|.+.... .....+..|+.+++++ +|||++++++++...
T Consensus 21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 96 (291)
T cd06639 21 TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS----DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVG 96 (291)
T ss_pred CCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc----cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCC
Confidence 468999999999999999999999999999999986431 2235567789999998 899999999998753
Q ss_pred CeEEEEEeccCCCchhhHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCc
Q 001847 745 THVCLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 822 (1005)
Q Consensus 745 ~~~~lV~E~~~ggsL~~~l~~--~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~ 822 (1005)
+..|+||||+++++|.+++.. .....+++..++.++.|++.||.|||+.|++|+||||+||+++.++.+||+|||++.
T Consensus 97 ~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~ 176 (291)
T cd06639 97 GQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSA 176 (291)
T ss_pred CeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccch
Confidence 368999999999999998863 223468999999999999999999999999999999999999999999999999885
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCC-----CCChhhHHHHHHHHHHHHcC
Q 001847 823 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-----HTSAVDWWALGILLYEMLYG 897 (1005)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~-----~~~~sDIwSlGvll~eLltG 897 (1005)
...... .......|+..|+|||.+.... ++.++|||||||++|+|++|
T Consensus 177 ~~~~~~---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g 229 (291)
T cd06639 177 QLTSTR---------------------------LRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDG 229 (291)
T ss_pred hccccc---------------------------ccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhC
Confidence 432110 0112346888999999985432 57899999999999999999
Q ss_pred CCCCCCCChHHHHHHHHhCCCC-CCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCC
Q 001847 898 YTPFRGKTRQKTFANILHKDLK-FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 962 (1005)
Q Consensus 898 ~~Pf~~~~~~~~~~~i~~~~~~-~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~ 962 (1005)
+.||........+..+...... .......+..+.+||.+||..+|++||+ +.++++||||+
T Consensus 230 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps----~~~il~~~~~~ 291 (291)
T cd06639 230 DPPLFDMHPVKTLFKIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPS----VTHLLEHPFIK 291 (291)
T ss_pred CCCCCCCcHHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcC----HHHHhcCcccC
Confidence 9999887766665555544221 2222335678999999999999999999 99999999995
No 208
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=2.8e-35 Score=325.85 Aligned_cols=256 Identities=28% Similarity=0.415 Sum_probs=209.6
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
++|++++.||+|+||.||+|.+..+++.||+|.+..... .......+.+|+++++.++||||+++++++...+..|+||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 79 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESED-DKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVF 79 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccC-cchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEE
Confidence 369999999999999999999988999999998875432 2234456778999999999999999999999999999999
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 831 (1005)
||+.+++|..+.... ..++...++.++.||+.||.|||+.|++|+||+|+||++++++.++|+|||++.......
T Consensus 80 e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~--- 154 (286)
T cd07846 80 EFVDHTVLDDLEKYP--NGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG--- 154 (286)
T ss_pred ecCCccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc---
Confidence 999988888776543 348999999999999999999999999999999999999999999999999885432110
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001847 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 910 (1005)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~ 910 (1005)
.......++..|+|||++.+ ..++.++|||||||++|+|++|..||.+....+..
T Consensus 155 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~ 210 (286)
T cd07846 155 ------------------------EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQL 210 (286)
T ss_pred ------------------------cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHH
Confidence 11123467889999999875 34678999999999999999999999876654444
Q ss_pred HHHHhC-------------------CCCCCC----------CCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCC
Q 001847 911 ANILHK-------------------DLKFPS----------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 961 (1005)
Q Consensus 911 ~~i~~~-------------------~~~~~~----------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff 961 (1005)
..+... ....+. ...++..+.+|+.+||..+|++||+ +.++++||||
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~----~~~il~~~~~ 286 (286)
T cd07846 211 YHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPS----SSQLLHHEFF 286 (286)
T ss_pred HHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchh----HHHHhcCCCC
Confidence 333320 001110 1245778999999999999999999 9999999998
No 209
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=7.4e-35 Score=324.18 Aligned_cols=261 Identities=23% Similarity=0.367 Sum_probs=211.8
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
++|++.+.||.|++|.||++.+..+++.||+|.+..... .......+.+|+.++++++||||+++++++......|+||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQE-DEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVF 80 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccc-cccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEE
Confidence 579999999999999999999998999999998865422 2233456778999999999999999999999999999999
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEec-CCcEEEEeccCCcccCCCCCC
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLSCLTSCKPQL 830 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~-~g~vkL~DFG~a~~~~~~~~~ 830 (1005)
||+ +++|.+.+.......+++..++.++.||+.||.|||++|++|+||+|+||+++. ++.+||+|||++.......
T Consensus 81 e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~-- 157 (294)
T PLN00009 81 EYL-DLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV-- 157 (294)
T ss_pred ecc-cccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCc--
Confidence 999 568888876654445788999999999999999999999999999999999985 5679999999885432110
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001847 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 909 (1005)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~ 909 (1005)
.......+++.|+|||++.+. .++.++|||||||++|+|++|+.||........
T Consensus 158 -------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~ 212 (294)
T PLN00009 158 -------------------------RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDE 212 (294)
T ss_pred -------------------------cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 011223578899999998664 568899999999999999999999988776655
Q ss_pred HHHHHhCC--C-------------------CCC------CCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCC
Q 001847 910 FANILHKD--L-------------------KFP------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 962 (1005)
Q Consensus 910 ~~~i~~~~--~-------------------~~~------~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~ 962 (1005)
+..+.... . .++ .....+..+.++|.+||..+|++||+ +.++++||||+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps----~~~~l~~~~~~ 288 (294)
T PLN00009 213 LFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRIT----ARAALEHEYFK 288 (294)
T ss_pred HHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcC----HHHHhcCchHh
Confidence 55443210 0 000 01235778899999999999999999 99999999999
Q ss_pred CCC
Q 001847 963 GVN 965 (1005)
Q Consensus 963 ~~~ 965 (1005)
.+.
T Consensus 289 ~~~ 291 (294)
T PLN00009 289 DLG 291 (294)
T ss_pred HHh
Confidence 753
No 210
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=6.7e-35 Score=322.96 Aligned_cols=256 Identities=26% Similarity=0.384 Sum_probs=207.9
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceEEEEEE-----eC
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQ-----TK 744 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~-----~~ 744 (1005)
.++|++++.||+|+||.||+|.+..+++.+|+|++.... .....+.+|+.+++.+ +|+||+++++++. ..
T Consensus 17 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~ 92 (286)
T cd06638 17 SDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH----DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNG 92 (286)
T ss_pred ccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc----chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCC
Confidence 568999999999999999999999999999999876431 1234567899999999 7999999999874 34
Q ss_pred CeEEEEEeccCCCchhhHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCc
Q 001847 745 THVCLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 822 (1005)
Q Consensus 745 ~~~~lV~E~~~ggsL~~~l~~--~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~ 822 (1005)
+.+|+||||+++++|.+++.. .....+++..+..++.|++.||.|||+.+|+||||||+||+++.++.++|+|||++.
T Consensus 93 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~ 172 (286)
T cd06638 93 DQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVSA 172 (286)
T ss_pred CeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCCcee
Confidence 678999999999999998753 223458899999999999999999999999999999999999999999999999885
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-----CCCCChhhHHHHHHHHHHHHcC
Q 001847 823 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLYG 897 (1005)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-----~~~~~~sDIwSlGvll~eLltG 897 (1005)
...... .......|++.|+|||++.. ..++.++|||||||++|+|++|
T Consensus 173 ~~~~~~---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g 225 (286)
T cd06638 173 QLTSTR---------------------------LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDG 225 (286)
T ss_pred ecccCC---------------------------CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcC
Confidence 432110 01123468999999999853 3467899999999999999999
Q ss_pred CCCCCCCChHHHHHHHHhCC-CCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCC
Q 001847 898 YTPFRGKTRQKTFANILHKD-LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 961 (1005)
Q Consensus 898 ~~Pf~~~~~~~~~~~i~~~~-~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff 961 (1005)
+.||........+..+.... .........+..+.+||.+||+.+|++||+ +.++++|+||
T Consensus 226 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~ell~~~~~ 286 (286)
T cd06638 226 DPPLADLHPMRALFKIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPT----VSDLLQHVFI 286 (286)
T ss_pred CCCCCCCchhHHHhhccccCCCcccCCCCcCHHHHHHHHHHccCCcccCCC----HHHHhhcccC
Confidence 99998776555444433322 112222335678999999999999999999 9999999997
No 211
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=9.3e-35 Score=319.36 Aligned_cols=258 Identities=27% Similarity=0.428 Sum_probs=211.3
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccC-------hHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN-------RNKVHRACAEREILDMLDHPFVPALYASFQTKT 745 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~-------~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 745 (1005)
+|.+.+.||.|++|.||++.+..+++.+|+|.++...... ....+.+..|+.+++.++|+||+++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 5888999999999999999998899999999886431111 112356778999999999999999999999999
Q ss_pred eEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 001847 746 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 825 (1005)
Q Consensus 746 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~ 825 (1005)
.+++||||+.+++|.+++... ..++...++.++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++....
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~ 159 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY--GRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSD 159 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeecccccccc
Confidence 999999999999999999765 458999999999999999999999999999999999999999999999999885432
Q ss_pred CCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCC--CCChhhHHHHHHHHHHHHcCCCCCCC
Q 001847 826 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG--HTSAVDWWALGILLYEMLYGYTPFRG 903 (1005)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~--~~~~sDIwSlGvll~eLltG~~Pf~~ 903 (1005)
.... ........|+..|+|||.+.... ++.++|+||||+++|++++|..||..
T Consensus 160 ~~~~-------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~ 214 (272)
T cd06629 160 DIYD-------------------------NDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSD 214 (272)
T ss_pred cccc-------------------------ccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcC
Confidence 1100 00112346889999999987654 78899999999999999999999976
Q ss_pred CChHHHHHHHHhCC--CCCCC--CCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCC
Q 001847 904 KTRQKTFANILHKD--LKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 961 (1005)
Q Consensus 904 ~~~~~~~~~i~~~~--~~~~~--~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff 961 (1005)
.........+.... ..++. ...++..+.+||.+||..+|++||+ +.++|+||||
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~il~~~~~ 272 (272)
T cd06629 215 EEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPT----ARELLQHPFI 272 (272)
T ss_pred cchHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCC----HHHHhhCCCC
Confidence 65554444433222 12222 1345788999999999999999999 9999999997
No 212
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=6.1e-35 Score=321.71 Aligned_cols=257 Identities=27% Similarity=0.458 Sum_probs=213.7
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC---CCCcceEEEEEEeCCeEEE
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD---HPFVPALYASFQTKTHVCL 749 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~---hpnIv~l~~~~~~~~~~~l 749 (1005)
.|++++.||.|+||.||++.+..+++.|++|.+.... .......+.+|+.+++.+. |||++++++++......|+
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~l 79 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT--PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWI 79 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC--CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEE
Confidence 5888999999999999999999999999999987542 2334567788999999996 9999999999999999999
Q ss_pred EEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 001847 750 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 829 (1005)
Q Consensus 750 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~ 829 (1005)
||||+++++|.+++... .+++..+..++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++.......
T Consensus 80 v~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~- 155 (277)
T cd06917 80 IMEYAEGGSVRTLMKAG---PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNS- 155 (277)
T ss_pred EEecCCCCcHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCc-
Confidence 99999999999998653 58999999999999999999999999999999999999999999999999885432110
Q ss_pred CCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001847 830 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 908 (1005)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~ 908 (1005)
.......|+..|+|||.+.+ ..++.++|+|||||++|+|++|..||.+.....
T Consensus 156 --------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~ 209 (277)
T cd06917 156 --------------------------SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFR 209 (277)
T ss_pred --------------------------cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhh
Confidence 11223468899999999865 446889999999999999999999998876655
Q ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCC
Q 001847 909 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 965 (1005)
Q Consensus 909 ~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~ 965 (1005)
....+.....+.......+.++.+|+.+||..||++||+ +.++++|+||+...
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~----~~~il~~~~~~~~~ 262 (277)
T cd06917 210 AMMLIPKSKPPRLEDNGYSKLLREFVAACLDEEPKERLS----AEELLKSKWIKAHS 262 (277)
T ss_pred hhhccccCCCCCCCcccCCHHHHHHHHHHcCCCcccCcC----HHHHhhChHhhccc
Confidence 444333322221112236788999999999999999999 99999999998753
No 213
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=2e-35 Score=325.78 Aligned_cols=257 Identities=27% Similarity=0.402 Sum_probs=215.8
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
..|+.++.||.|+||.||++.+..++..+|+|.+.... .......+.+|+.+++.++||||+++++++...+..|+||
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEE--AEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIM 81 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEecccc--chHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEE
Confidence 35888999999999999999998899999999987542 2334567889999999999999999999999999999999
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 831 (1005)
||+.+++|.+++.. ..+++..++.++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~--- 155 (277)
T cd06642 82 EYLGGGSALDLLKP---GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ--- 155 (277)
T ss_pred EccCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcc---
Confidence 99999999998864 358999999999999999999999999999999999999999999999999885432110
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001847 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 911 (1005)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~ 911 (1005)
.......|+..|+|||++.+..++.++|+|||||++|+|++|..||..........
T Consensus 156 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~ 211 (277)
T cd06642 156 ------------------------IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLF 211 (277)
T ss_pred ------------------------hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHh
Confidence 01123467889999999988888999999999999999999999997766555444
Q ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCC
Q 001847 912 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 965 (1005)
Q Consensus 912 ~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~ 965 (1005)
.+...... ......+..+.+||.+||..+|++||+ +.++++||||..+.
T Consensus 212 ~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~il~~~~~~~~~ 260 (277)
T cd06642 212 LIPKNSPP-TLEGQYSKPFKEFVEACLNKDPRFRPT----AKELLKHKFITRYT 260 (277)
T ss_pred hhhcCCCC-CCCcccCHHHHHHHHHHccCCcccCcC----HHHHHHhHHHHHHh
Confidence 43333221 112346778999999999999999999 99999999998644
No 214
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=4.8e-35 Score=332.31 Aligned_cols=261 Identities=24% Similarity=0.358 Sum_probs=207.8
Q ss_pred cccccCCccccccccccCcEEEEEEEEcC-----CCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceEEEE
Q 001847 667 EQINLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYAS 740 (1005)
Q Consensus 667 ~~i~~~~y~~~~~LG~G~~g~Vy~a~~~~-----~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~ 740 (1005)
|++..++|++++.||.|+||.||+|.+.. +++.||+|.+.... .......+..|+.++.++ +|+||++++++
T Consensus 2 ~~~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~E~~~~~~l~~h~niv~~~~~ 79 (337)
T cd05054 2 WEFPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA--TASEYKALMTELKILIHIGHHLNVVNLLGA 79 (337)
T ss_pred cccCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC--CHHHHHHHHHHHHHHHhhccCcchhheeee
Confidence 34556789999999999999999997543 35789999987532 233446677899999999 89999999998
Q ss_pred EEe-CCeEEEEEeccCCCchhhHHhhCCC---------------------------------------------------
Q 001847 741 FQT-KTHVCLITDYCPGGELFLLLDRQPT--------------------------------------------------- 768 (1005)
Q Consensus 741 ~~~-~~~~~lV~E~~~ggsL~~~l~~~~~--------------------------------------------------- 768 (1005)
+.. ...++++|||+++++|.+++.....
T Consensus 80 ~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (337)
T cd05054 80 CTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEED 159 (337)
T ss_pred EecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccc
Confidence 764 4678999999999999998864221
Q ss_pred --------CCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhh
Q 001847 769 --------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKR 840 (1005)
Q Consensus 769 --------~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~ 840 (1005)
..++...+..++.||+.||.|||++||+||||||+|||++.++.++|+|||++........
T Consensus 160 ~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~----------- 228 (337)
T cd05054 160 EEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD----------- 228 (337)
T ss_pred hhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcc-----------
Confidence 2578999999999999999999999999999999999999999999999999865321110
Q ss_pred cccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCC
Q 001847 841 RHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLK 919 (1005)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~Pf~~~~~~~~~~~i~~~~~~ 919 (1005)
........++..|+|||++.+..++.++|||||||++|+|++ |..||.+....+.+...+.....
T Consensus 229 --------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~ 294 (337)
T cd05054 229 --------------YVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTR 294 (337)
T ss_pred --------------hhhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCC
Confidence 001123456778999999999999999999999999999997 99999875544444444444333
Q ss_pred CCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcC
Q 001847 920 FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 958 (1005)
Q Consensus 920 ~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~h 958 (1005)
.......+.++.+++.+||+.+|++||+ +.++++|
T Consensus 295 ~~~~~~~~~~~~~l~~~cl~~~p~~RPs----~~ell~~ 329 (337)
T cd05054 295 MRAPEYATPEIYSIMLDCWHNNPEDRPT----FSELVEI 329 (337)
T ss_pred CCCCccCCHHHHHHHHHHccCChhhCcC----HHHHHHH
Confidence 3333456788999999999999999999 6666653
No 215
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=5.8e-35 Score=325.58 Aligned_cols=259 Identities=27% Similarity=0.407 Sum_probs=212.0
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeeccccc--ChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--NRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 750 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 750 (1005)
+|++.+.||.|++|.||++.+..+++.|++|.+...... .......+..|+.+++.++|+||+++++++...+..|+|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 488899999999999999999889999999999865432 122345567899999999999999999999999999999
Q ss_pred EeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001847 751 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (1005)
Q Consensus 751 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 830 (1005)
|||+ +++|.+++.... ..+++..+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~e~~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~-- 156 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPN-- 156 (298)
T ss_pred Eccc-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCC--
Confidence 9999 999999997643 369999999999999999999999999999999999999999999999999985532110
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001847 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 909 (1005)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~ 909 (1005)
.......+++.|+|||.+.+ ..++.++|||||||++|+|++|.+||.+......
T Consensus 157 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~ 211 (298)
T cd07841 157 -------------------------RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQ 211 (298)
T ss_pred -------------------------ccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHH
Confidence 01122356788999999855 4568899999999999999999888887766555
Q ss_pred HHHHHhCCCC-----C------------------C---CCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCC
Q 001847 910 FANILHKDLK-----F------------------P---SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 963 (1005)
Q Consensus 910 ~~~i~~~~~~-----~------------------~---~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~ 963 (1005)
+..+...-.. + + .....+..+.+||.+||.++|.+||+ +.+++.|+||++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s----~~e~l~~~~~~~ 287 (298)
T cd07841 212 LGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRIT----ARQALEHPYFSN 287 (298)
T ss_pred HHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcC----HHHHhhCccccC
Confidence 5444321000 0 0 01224678899999999999999999 999999999997
Q ss_pred C
Q 001847 964 V 964 (1005)
Q Consensus 964 ~ 964 (1005)
.
T Consensus 288 ~ 288 (298)
T cd07841 288 D 288 (298)
T ss_pred C
Confidence 4
No 216
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=8.9e-35 Score=318.46 Aligned_cols=255 Identities=26% Similarity=0.377 Sum_probs=209.2
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
++|++.+.||+|+||.||++.+..+++.||+|.+......+......+.+|+.+++.++||||+++++++...+..++||
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 57999999999999999999999999999999887644445556677889999999999999999999999999999999
Q ss_pred eccCCCchhhHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 001847 752 DYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 829 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~ 829 (1005)
||+++++|.+++... ....+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~- 160 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT- 160 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchh-
Confidence 999999999888632 23458899999999999999999999999999999999999999999999999885432110
Q ss_pred CCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCh--H
Q 001847 830 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR--Q 907 (1005)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~--~ 907 (1005)
.......|++.|+|||.+.+..++.++||||||+++|+|++|+.||..... .
T Consensus 161 --------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~ 214 (267)
T cd08228 161 --------------------------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLF 214 (267)
T ss_pred --------------------------HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHH
Confidence 011234688899999999888889999999999999999999999965432 2
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHc
Q 001847 908 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 957 (1005)
Q Consensus 908 ~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 957 (1005)
.....+.....+.......+..+.+|+.+||..+|++||+ +.++++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~----~~~vl~ 260 (267)
T cd08228 215 SLCQKIEQCDYPPLPTEHYSEKLRELVSMCIYPDPDQRPD----IGYVHQ 260 (267)
T ss_pred HHHHHHhcCCCCCCChhhcCHHHHHHHHHHCCCCcccCcC----HHHHHH
Confidence 3333333322221112246678999999999999999999 666654
No 217
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=7.2e-35 Score=323.65 Aligned_cols=256 Identities=27% Similarity=0.444 Sum_probs=204.7
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 750 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 750 (1005)
.+.|++.+.||+|++|.||++.+..+++.||+|.+...... .....+.+|+.+++.++|+||+++++++...+..|+|
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 81 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEE--GAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLV 81 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEeccccc--CCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEE
Confidence 46899999999999999999999889999999998754221 1223456799999999999999999999999999999
Q ss_pred EeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001847 751 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (1005)
Q Consensus 751 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 830 (1005)
|||+. ++|.+++.... ..+++..++.++.||+.||.|||++||+|+||||+||+++.++.+||+|||++.......
T Consensus 82 ~e~~~-~~L~~~~~~~~-~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~-- 157 (291)
T cd07844 82 FEYLD-TDLKQYMDDCG-GGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPS-- 157 (291)
T ss_pred EecCC-CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCCC--
Confidence 99996 58998887543 358999999999999999999999999999999999999999999999999874321100
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCC-hHH
Q 001847 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKT-RQK 908 (1005)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlGvll~eLltG~~Pf~~~~-~~~ 908 (1005)
.......+++.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.. ..+
T Consensus 158 -------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~ 212 (291)
T cd07844 158 -------------------------KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVED 212 (291)
T ss_pred -------------------------ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHH
Confidence 01112346789999999875 457889999999999999999999997665 223
Q ss_pred HHHHHHhC-------------------CC--CCC-------CCCCCC--HHHHHHHHHccccCcCccCCChhcHHHHHcC
Q 001847 909 TFANILHK-------------------DL--KFP-------SSTPTS--LHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 958 (1005)
Q Consensus 909 ~~~~i~~~-------------------~~--~~~-------~~~~~s--~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~h 958 (1005)
....+... .. ... .....+ ..+.++|.+||+.+|.+||+ +.++++|
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps----~~e~l~~ 288 (291)
T cd07844 213 QLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRIS----AAEAMKH 288 (291)
T ss_pred HHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccC----HHHHhcC
Confidence 22222110 00 000 001223 67889999999999999999 9999999
Q ss_pred CCC
Q 001847 959 PFF 961 (1005)
Q Consensus 959 pff 961 (1005)
|||
T Consensus 289 ~~f 291 (291)
T cd07844 289 PYF 291 (291)
T ss_pred CCC
Confidence 998
No 218
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=8.3e-35 Score=354.25 Aligned_cols=271 Identities=25% Similarity=0.332 Sum_probs=209.9
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
++|++++.||+|+||.||+|.+..+++.||+|++............++.+|+.+++.++||||+++++++...+..|+||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 68999999999999999999999999999999998654444455677889999999999999999999999999999999
Q ss_pred eccCCCchhhHHhhCC---------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCc
Q 001847 752 DYCPGGELFLLLDRQP---------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 822 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~---------~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~ 822 (1005)
||++|++|.+++.... ...++...+..++.||+.||+|||++||+||||||+|||++.+|.++|+|||++.
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk 161 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAI 161 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcce
Confidence 9999999999886421 1235667788999999999999999999999999999999999999999999996
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCC
Q 001847 823 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 902 (1005)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~ 902 (1005)
............ ... ...............+||+.|+|||++.+..++.++|||||||++|+|++|..||.
T Consensus 162 ~i~~~~~~~~~l-------~~~--~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~ 232 (932)
T PRK13184 162 FKKLEEEDLLDI-------DVD--ERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYR 232 (932)
T ss_pred eccccccccccc-------ccc--cccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCC
Confidence 542111100000 000 00000011112234679999999999999899999999999999999999999998
Q ss_pred CCChHHHHHHH-HhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhc
Q 001847 903 GKTRQKTFANI-LHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 951 (1005)
Q Consensus 903 ~~~~~~~~~~i-~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~ 951 (1005)
........... ............++..+.+++.+||..||++|++..+.
T Consensus 233 ~~~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~ee 282 (932)
T PRK13184 233 RKKGRKISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQE 282 (932)
T ss_pred CcchhhhhhhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 75544332221 11111122223567889999999999999999985443
No 219
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=1.8e-34 Score=315.12 Aligned_cols=259 Identities=29% Similarity=0.536 Sum_probs=215.2
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 752 (1005)
+|.+.+.||+|+||.||++.+..+++.|++|.++.... .......+.+|+.+++.++|+||+++++++...+.+++|+|
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDN-DPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFME 79 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECccc-chHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEe
Confidence 58899999999999999999988999999999886532 24567888999999999999999999999999999999999
Q ss_pred ccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001847 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (1005)
Q Consensus 753 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 832 (1005)
|+.+++|.+++... ..+++..++.++.|++.||.|||+.||+|+||+|+||+++.++.+||+|||++..........
T Consensus 80 ~~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~- 156 (264)
T cd06626 80 YCSGGTLEELLEHG--RILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTM- 156 (264)
T ss_pred cCCCCcHHHHHhhc--CCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcc-
Confidence 99999999998764 348899999999999999999999999999999999999999999999999986543221100
Q ss_pred CcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCC---CCChhhHHHHHHHHHHHHcCCCCCCCCChH-H
Q 001847 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG---HTSAVDWWALGILLYEMLYGYTPFRGKTRQ-K 908 (1005)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~---~~~~sDIwSlGvll~eLltG~~Pf~~~~~~-~ 908 (1005)
........+++.|+|||++.+.. .+.++||||||+++|++++|+.||.+.... .
T Consensus 157 ----------------------~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~ 214 (264)
T cd06626 157 ----------------------GEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQ 214 (264)
T ss_pred ----------------------cccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHH
Confidence 00012356888999999998766 788999999999999999999999765332 2
Q ss_pred HHHHHHh-CCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCC
Q 001847 909 TFANILH-KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 961 (1005)
Q Consensus 909 ~~~~i~~-~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff 961 (1005)
....+.. ....++.....+..+.+||.+||+.+|++||+ +.+++.|||+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~----~~~i~~~~~~ 264 (264)
T cd06626 215 IMFHVGAGHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPT----ASELLQHPFV 264 (264)
T ss_pred HHHHHhcCCCCCCCcccccCHHHHHHHHHHccCCcccCCC----HHHHhcCCCC
Confidence 2222222 22334444445888999999999999999999 9999999996
No 220
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=1.4e-34 Score=315.64 Aligned_cols=256 Identities=25% Similarity=0.472 Sum_probs=215.9
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEe--CCeEEEE
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT--KTHVCLI 750 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~~~~~lV 750 (1005)
+|++++.||.|+||.||+|.+..++..+|+|.+..... .......+..|+.+++.++|+||+++++++.. ....|++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNM-TEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIV 79 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEE
Confidence 58899999999999999999999999999999876433 34455778889999999999999999998753 4578999
Q ss_pred EeccCCCchhhHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHH-----HcCcccCCCCCCcEEEecCCcEEEEeccCCcc
Q 001847 751 TDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLH-----CQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 823 (1005)
Q Consensus 751 ~E~~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qil~aL~~LH-----~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~ 823 (1005)
|||+++++|.+++... ....+++..++.++.||+.||.||| +.+++|+||+|+||+++.++.+||+|||++..
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~ 159 (265)
T cd08217 80 MEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKI 159 (265)
T ss_pred ehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEeccccccc
Confidence 9999999999998652 2356899999999999999999999 89999999999999999999999999999855
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001847 824 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 903 (1005)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~ 903 (1005)
..... .......|++.|+|||.+....++.++|+||||+++|+|++|+.||..
T Consensus 160 ~~~~~---------------------------~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~ 212 (265)
T cd08217 160 LGHDS---------------------------SFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTA 212 (265)
T ss_pred ccCCc---------------------------ccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccC
Confidence 32111 001234689999999999888888999999999999999999999988
Q ss_pred CChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCC
Q 001847 904 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 961 (1005)
Q Consensus 904 ~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff 961 (1005)
.+.......+..+... ......+..+.+|+.+||..+|.+||+ +.++++|||+
T Consensus 213 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~p~~Rp~----~~~il~~~~~ 265 (265)
T cd08217 213 RNQLQLASKIKEGKFR-RIPYRYSSELNEVIKSMLNVDPDKRPS----TEELLQLPLI 265 (265)
T ss_pred cCHHHHHHHHhcCCCC-CCccccCHHHHHHHHHHccCCcccCCC----HHHHhhCCCC
Confidence 8766655555554332 222346788999999999999999999 9999999996
No 221
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.7e-34 Score=320.23 Aligned_cols=259 Identities=28% Similarity=0.453 Sum_probs=211.5
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEe--CCeEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT--KTHVCL 749 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~~~~~l 749 (1005)
++|+..+.||.|++|.||++.+..+++.+|+|.+.... .......+.+|++++++++||||++++++|.. .+.+|+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 78 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDP--NPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGI 78 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCC--chHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEE
Confidence 46899999999999999999999999999999987542 23455778899999999999999999998864 347899
Q ss_pred EEeccCCCchhhHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001847 750 ITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (1005)
Q Consensus 750 V~E~~~ggsL~~~l~~--~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 827 (1005)
||||+++++|.+++.. .....++...+..++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++......
T Consensus 79 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 158 (287)
T cd06621 79 AMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNS 158 (287)
T ss_pred EEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeecccccccccc
Confidence 9999999999988753 22355899999999999999999999999999999999999999999999999987432210
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC---
Q 001847 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK--- 904 (1005)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~--- 904 (1005)
......++..|+|||.+.+..++.++|||||||++|+|++|+.||...
T Consensus 159 -----------------------------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~ 209 (287)
T cd06621 159 -----------------------------LAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEP 209 (287)
T ss_pred -----------------------------ccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCC
Confidence 011235788899999998888999999999999999999999999765
Q ss_pred --ChHHHHHHHHhCCC-CCCCC----CCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCC
Q 001847 905 --TRQKTFANILHKDL-KFPSS----TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 965 (1005)
Q Consensus 905 --~~~~~~~~i~~~~~-~~~~~----~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~ 965 (1005)
...+....+..... ..+.. ...+..+.+||.+||..+|.+||| +.++++||||+...
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~eil~~~~~~~~~ 273 (287)
T cd06621 210 PLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPT----PWDMLEHPWIKAQM 273 (287)
T ss_pred CCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCC----HHHHHhCccccccc
Confidence 22333333333221 11111 123567899999999999999999 99999999998753
No 222
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=5.7e-35 Score=321.79 Aligned_cols=279 Identities=37% Similarity=0.639 Sum_probs=225.7
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCeEEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCLI 750 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~lV 750 (1005)
++|.+.+.||+|++|.||++.+..+++.|++|++.............+..|..+++++. |+||+++++++...+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 37999999999999999999999999999999987754444455577888999999998 99999999999999999999
Q ss_pred EeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001847 751 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (1005)
Q Consensus 751 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 830 (1005)
|||+.+++|.+++... ..++...++.++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++.........
T Consensus 81 ~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~ 158 (280)
T cd05581 81 LEYAPNGELLQYIRKY--GSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSP 158 (280)
T ss_pred EcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCcccc
Confidence 9999999999999875 35999999999999999999999999999999999999999999999999998654322111
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001847 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 910 (1005)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~ 910 (1005)
........ .................++..|+|||.+....++.++||||||++++++++|..||........+
T Consensus 159 ~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~ 231 (280)
T cd05581 159 ESNKGDAT-------NIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTF 231 (280)
T ss_pred ccCCCCCc-------cccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHH
Confidence 00000000 00000011112334557889999999998888889999999999999999999999988776666
Q ss_pred HHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCC
Q 001847 911 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 961 (1005)
Q Consensus 911 ~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff 961 (1005)
..+......++. ..+..+.+||.+||..+|.+||++.....++++||||
T Consensus 232 ~~~~~~~~~~~~--~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 232 QKILKLEYSFPP--NFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred HHHHhcCCCCCC--ccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 666655444443 4578899999999999999999933333999999998
No 223
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=3e-34 Score=322.59 Aligned_cols=258 Identities=26% Similarity=0.376 Sum_probs=217.7
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 752 (1005)
-|...+.||+|+||.||++.+..++..|++|.+.............+.+|+.+++.++|||++++++++......|+|||
T Consensus 22 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 101 (313)
T cd06633 22 IFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVME 101 (313)
T ss_pred HhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEe
Confidence 37777889999999999999999999999999876544445556678889999999999999999999999999999999
Q ss_pred ccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001847 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (1005)
Q Consensus 753 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 832 (1005)
|+ .++|.+++... ...+++..+..++.||+.+|.|||++|++|+||+|+||+++.++.++|+|||++....
T Consensus 102 ~~-~~~l~~~l~~~-~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~------- 172 (313)
T cd06633 102 YC-LGSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSS------- 172 (313)
T ss_pred cC-CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccC-------
Confidence 99 56787777653 3458999999999999999999999999999999999999999999999999873211
Q ss_pred CcchhhhhcccCCCCCcccccccccccccccCCccccccccc---CCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001847 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 909 (1005)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~---~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~ 909 (1005)
......|+..|+|||++. ...++.++|||||||++|+|++|..||...+....
T Consensus 173 ------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~ 228 (313)
T cd06633 173 ------------------------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA 228 (313)
T ss_pred ------------------------CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHH
Confidence 112346888999999984 35577899999999999999999999988777666
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCChh
Q 001847 910 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 967 (1005)
Q Consensus 910 ~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~~~ 967 (1005)
...+.....+.......+..+.+|+.+||+.+|.+||+ +.+++.||||+..+-+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~----~~~~l~~~~~~~~~~~ 282 (313)
T cd06633 229 LYHIAQNDSPTLQSNEWTDSFRGFVDYCLQKIPQERPA----SAELLRHDFVRRDRPA 282 (313)
T ss_pred HHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcC----HHHHhcCcccCCCchh
Confidence 66665554443333446778999999999999999999 9999999999976543
No 224
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=1e-34 Score=320.29 Aligned_cols=256 Identities=21% Similarity=0.309 Sum_probs=212.1
Q ss_pred ccCCccccccccccCcEEEEEEEEcC-----CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 001847 670 NLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 744 (1005)
Q Consensus 670 ~~~~y~~~~~LG~G~~g~Vy~a~~~~-----~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 744 (1005)
...+|.+.+.||+|+||.||++.+.. ++..||+|.++... .......+.+|+++++.++|+||+++++++...
T Consensus 3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 80 (280)
T cd05049 3 QRDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA--SNDARKDFEREAELLTNFQHENIVKFYGVCTEG 80 (280)
T ss_pred ChHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccC--CHHHHHHHHHHHHHHHhcCCCCchheeeEEecC
Confidence 35689999999999999999998743 36789999987542 233456888999999999999999999999999
Q ss_pred CeEEEEEeccCCCchhhHHhhCC------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCc
Q 001847 745 THVCLITDYCPGGELFLLLDRQP------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH 812 (1005)
Q Consensus 745 ~~~~lV~E~~~ggsL~~~l~~~~------------~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~ 812 (1005)
...|+||||+++++|.+++.... ...+++..+..++.||+.||.|||++|++|+||||+||+++.++.
T Consensus 81 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~ 160 (280)
T cd05049 81 DPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLV 160 (280)
T ss_pred CCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCe
Confidence 99999999999999999997532 234788999999999999999999999999999999999999999
Q ss_pred EEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHH
Q 001847 813 VSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLY 892 (1005)
Q Consensus 813 vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~ 892 (1005)
++|+|||++........ ........+++.|+|||++.+..++.++|||||||++|
T Consensus 161 ~kl~d~g~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 215 (280)
T cd05049 161 VKIGDFGMSRDVYTTDY-------------------------YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLW 215 (280)
T ss_pred EEECCcccceecccCcc-------------------------eecCCCCcccceecChhhhccCCcchhhhHHHHHHHHH
Confidence 99999998854321100 00112234678899999999989999999999999999
Q ss_pred HHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHc
Q 001847 893 EMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 957 (1005)
Q Consensus 893 eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 957 (1005)
+|++ |..||.+.........+..+....+ ....+..+.+|+.+||..||++||+ +.++++
T Consensus 216 e~~~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~Rp~----~~eil~ 276 (280)
T cd05049 216 EIFTYGKQPWYGLSNEEVIECITQGRLLQR-PRTCPSEVYDIMLGCWKRDPQQRIN----IKDIHE 276 (280)
T ss_pred HHHhcCCCCCCCCCHHHHHHHHHcCCcCCC-CCCCCHHHHHHHHHHcCCCcccCCC----HHHHHH
Confidence 9998 9999988887777777765544332 2357889999999999999999999 555553
No 225
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=1e-34 Score=315.85 Aligned_cols=256 Identities=27% Similarity=0.472 Sum_probs=216.7
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 752 (1005)
+|.+.+.||.|+||.||++.+..++..+|+|.+..... .......+.+|+.+++.++|+||+++++++...+..|+|+|
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e 79 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKM-PVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVME 79 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhc-cchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEe
Confidence 48899999999999999999999999999999876432 22344567789999999999999999999999999999999
Q ss_pred ccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCc-EEEEeccCCcccCCCCCCC
Q 001847 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH-VSLTDFDLSCLTSCKPQLL 831 (1005)
Q Consensus 753 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~-vkL~DFG~a~~~~~~~~~~ 831 (1005)
|+.+++|.+++.......+++..+..++.||+.||.|||+.+++|+||||+||++++++. ++|+|||.+.......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~--- 156 (257)
T cd08225 80 YCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM--- 156 (257)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCc---
Confidence 999999999997755556899999999999999999999999999999999999998864 6999999885432110
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001847 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 911 (1005)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~ 911 (1005)
.......|++.|+|||++....++.++|+||||+++|+|++|..||...+......
T Consensus 157 ------------------------~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~ 212 (257)
T cd08225 157 ------------------------ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVL 212 (257)
T ss_pred ------------------------ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHH
Confidence 01122358899999999988888999999999999999999999998877766666
Q ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCC
Q 001847 912 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 961 (1005)
Q Consensus 912 ~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff 961 (1005)
.+...... +.....+..+.++|.+||..+|++||+ +.++++||||
T Consensus 213 ~~~~~~~~-~~~~~~~~~~~~~i~~~l~~~p~~Rpt----~~~ll~~~~~ 257 (257)
T cd08225 213 KICQGYFA-PISPNFSRDLRSLISQLFKVSPRDRPS----ITSILKRPFL 257 (257)
T ss_pred HHhcccCC-CCCCCCCHHHHHHHHHHhccChhhCcC----HHHHhhCCCC
Confidence 55544332 223346788999999999999999999 9999999997
No 226
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=1.8e-34 Score=313.14 Aligned_cols=256 Identities=31% Similarity=0.538 Sum_probs=220.2
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 752 (1005)
+|++.+.||.|++|.||++.+..++..+++|.+..... .......+..|+++++.++|+|++++++.+......++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e 79 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNM-SEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVME 79 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccC-ChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEE
Confidence 58899999999999999999988999999999876432 34556678889999999999999999999999999999999
Q ss_pred ccCCCchhhHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001847 753 YCPGGELFLLLDRQP--TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (1005)
Q Consensus 753 ~~~ggsL~~~l~~~~--~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 830 (1005)
|+++++|.+++.... ...++...+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~-- 157 (258)
T cd08215 80 YADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV-- 157 (258)
T ss_pred ecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCc--
Confidence 999999999997643 3569999999999999999999999999999999999999999999999999885432110
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001847 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 910 (1005)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~ 910 (1005)
.......|++.|+|||.+....++.++|+||||+++|+|++|+.||.........
T Consensus 158 -------------------------~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~ 212 (258)
T cd08215 158 -------------------------DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELA 212 (258)
T ss_pred -------------------------ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHH
Confidence 1122346889999999998888899999999999999999999999887776666
Q ss_pred HHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCC
Q 001847 911 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 961 (1005)
Q Consensus 911 ~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff 961 (1005)
..+....... .....+..+.+++.+||..+|++||+ +.++|+||||
T Consensus 213 ~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~~p~~Rp~----~~~ll~~~~~ 258 (258)
T cd08215 213 LKILKGQYPP-IPSQYSSELRNLVSSLLQKDPEERPS----IAQILQSPFI 258 (258)
T ss_pred HHHhcCCCCC-CCCCCCHHHHHHHHHHcCCChhhCcC----HHHHhcCCCC
Confidence 6666554322 22356789999999999999999999 9999999997
No 227
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=1.2e-34 Score=322.39 Aligned_cols=258 Identities=22% Similarity=0.381 Sum_probs=207.5
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCe----
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTH---- 746 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~---- 746 (1005)
++|++.+.||+|+||.||++.+..+++.||+|.+.... ........+.+|+.+++.+. |+||+++++++.....
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~-~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 79 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEM-DEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKP 79 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhc-cccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCc
Confidence 36999999999999999999999999999999886542 12223456778999999994 6999999999887655
Q ss_pred -EEEEEeccCCCchhhHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEec-CCcEEEEeccCC
Q 001847 747 -VCLITDYCPGGELFLLLDRQP---TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLS 821 (1005)
Q Consensus 747 -~~lV~E~~~ggsL~~~l~~~~---~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~-~g~vkL~DFG~a 821 (1005)
.|+||||+.+ +|.+++.... ...+++..++.++.||+.||.|||++||+||||+|+||+++. ++.+||+|||++
T Consensus 80 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~ 158 (295)
T cd07837 80 SLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLG 158 (295)
T ss_pred eEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeecccc
Confidence 8999999965 7888876432 245899999999999999999999999999999999999998 889999999988
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCC
Q 001847 822 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTP 900 (1005)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlGvll~eLltG~~P 900 (1005)
....... .......+++.|+|||++.+ ..++.++||||||+++|+|++|..|
T Consensus 159 ~~~~~~~---------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~ 211 (295)
T cd07837 159 RAFSIPV---------------------------KSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPL 211 (295)
T ss_pred eecCCCc---------------------------cccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCC
Confidence 5432110 01112356889999998865 4568899999999999999999999
Q ss_pred CCCCChHHHHHHHHhCCC-----C------------CCC---------CCCCCHHHHHHHHHccccCcCccCCChhcHHH
Q 001847 901 FRGKTRQKTFANILHKDL-----K------------FPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 954 (1005)
Q Consensus 901 f~~~~~~~~~~~i~~~~~-----~------------~~~---------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~e 954 (1005)
|.+.+.......+..... . .+. ....+..+.+||.+||..||.+||+ +.+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~----~~e 287 (295)
T cd07837 212 FPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRIS----AKA 287 (295)
T ss_pred CCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCC----HHH
Confidence 988777665555443100 0 000 1236778999999999999999999 999
Q ss_pred HHcCCCCC
Q 001847 955 IKKHPFFK 962 (1005)
Q Consensus 955 lL~hpff~ 962 (1005)
++.||||+
T Consensus 288 il~~~~~~ 295 (295)
T cd07837 288 ALTHPYFD 295 (295)
T ss_pred HhcCCCcC
Confidence 99999995
No 228
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=7.8e-35 Score=324.77 Aligned_cols=257 Identities=28% Similarity=0.464 Sum_probs=216.1
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
..|.....||.|+||.||++.+..+++.||+|.+.... ......+.+|+.+++.++||||+++++++..++..|+||
T Consensus 21 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~ 97 (297)
T cd06659 21 SLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRK---QQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLM 97 (297)
T ss_pred hhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecc---cchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEE
Confidence 35667778999999999999998899999999986532 223456788999999999999999999999999999999
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 831 (1005)
||+++++|..++.. ..+++..++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||++......
T Consensus 98 e~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~---- 170 (297)
T cd06659 98 EFLQGGALTDIVSQ---TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKD---- 170 (297)
T ss_pred ecCCCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccc----
Confidence 99999999988754 34899999999999999999999999999999999999999999999999987432211
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001847 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 911 (1005)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~ 911 (1005)
........|++.|+|||++.+..++.++|||||||++|+|++|+.||..........
T Consensus 171 -----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~ 227 (297)
T cd06659 171 -----------------------VPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMK 227 (297)
T ss_pred -----------------------cccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 011123568999999999988888999999999999999999999998877666655
Q ss_pred HHHhCCCC-CCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCC
Q 001847 912 NILHKDLK-FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 965 (1005)
Q Consensus 912 ~i~~~~~~-~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~ 965 (1005)
.+...... +......+..+.++|.+||+.+|.+||+ +.++++||||....
T Consensus 228 ~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps----~~~ll~~~~~~~~~ 278 (297)
T cd06659 228 RLRDSPPPKLKNAHKISPVLRDFLERMLTREPQERAT----AQELLDHPFLLQTG 278 (297)
T ss_pred HHhccCCCCccccCCCCHHHHHHHHHHhcCCcccCcC----HHHHhhChhhccCC
Confidence 55433222 2223346788999999999999999999 99999999999753
No 229
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1.2e-34 Score=317.46 Aligned_cols=252 Identities=29% Similarity=0.405 Sum_probs=208.0
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
++|++.+.||.|++|.||++.+..++..++||.+.............+.+|+.+++.++|+||+++++++...+..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 57999999999999999999999999999999887654444555678889999999999999999999999999999999
Q ss_pred eccCCCchhhHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 001847 752 DYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 829 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~ 829 (1005)
||+++++|.+++... ....+++..++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~- 160 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT- 160 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCC-
Confidence 999999999988642 23458999999999999999999999999999999999999999999999999875432110
Q ss_pred CCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCh--H
Q 001847 830 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR--Q 907 (1005)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~--~ 907 (1005)
.......|+..|+|||.+.+..++.++|+||||+++|+|++|..||.+... .
T Consensus 161 --------------------------~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~ 214 (267)
T cd08229 161 --------------------------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY 214 (267)
T ss_pred --------------------------cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHH
Confidence 011234688999999999888889999999999999999999999976533 2
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChh
Q 001847 908 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 950 (1005)
Q Consensus 908 ~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~ 950 (1005)
.....+.....+.......+..+.+|+.+||..+|++|||+.+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ 257 (267)
T cd08229 215 SLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDITY 257 (267)
T ss_pred HHhhhhhcCCCCCCCcccccHHHHHHHHHhcCCCcccCCCHHH
Confidence 3333333332222222346788999999999999999999443
No 230
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=1.7e-34 Score=319.89 Aligned_cols=258 Identities=28% Similarity=0.463 Sum_probs=220.1
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 750 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 750 (1005)
.+.|.+.+.||+|++|.||++.+..++..+++|.+..... ....+.+|+.+++.++|+||+++++++...+..|+|
T Consensus 18 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 93 (286)
T cd06614 18 RELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ----NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVV 93 (286)
T ss_pred cccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch----hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEE
Confidence 4579999999999999999999988899999999875422 456778899999999999999999999999999999
Q ss_pred EeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001847 751 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (1005)
Q Consensus 751 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 830 (1005)
+||+++++|.+++.... ..++...+..++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++.......
T Consensus 94 ~e~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~-- 170 (286)
T cd06614 94 MEYMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEK-- 170 (286)
T ss_pred EeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccch--
Confidence 99999999999998753 369999999999999999999999999999999999999999999999999874432110
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001847 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 910 (1005)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~ 910 (1005)
.......+++.|++||.+.+..++.++|+|||||++|+|++|..||.........
T Consensus 171 -------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~ 225 (286)
T cd06614 171 -------------------------SKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRAL 225 (286)
T ss_pred -------------------------hhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 0112345788999999998888899999999999999999999999887766555
Q ss_pred HHHHhCCCC-CCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCC
Q 001847 911 ANILHKDLK-FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 964 (1005)
Q Consensus 911 ~~i~~~~~~-~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~ 964 (1005)
..+...... ......++..+.+||.+||+.+|.+||+ +.++++|+||+..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt----~~~il~~~~~~~~ 276 (286)
T cd06614 226 FLITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPS----AEELLQHPFLKKA 276 (286)
T ss_pred HHHHhcCCCCCcchhhCCHHHHHHHHHHhccChhhCcC----HHHHhhChHhhcc
Confidence 555443332 2222336788999999999999999999 9999999999984
No 231
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=5.6e-35 Score=325.25 Aligned_cols=257 Identities=26% Similarity=0.425 Sum_probs=215.8
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 750 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 750 (1005)
.++|++++.||+|+||.||++.+..++..|++|.+... .......+.+|+.+++.++||||+++++++...+..|+|
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv 94 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQ---QQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVV 94 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccc---cchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEE
Confidence 36899999999999999999999888999999998643 223346778899999999999999999999999999999
Q ss_pred EeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001847 751 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (1005)
Q Consensus 751 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 830 (1005)
+||+++++|.+++... .++...+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++.......
T Consensus 95 ~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~-- 169 (293)
T cd06647 95 MEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-- 169 (293)
T ss_pred EecCCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceecccccc--
Confidence 9999999999998753 47899999999999999999999999999999999999999999999999875432110
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001847 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 910 (1005)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~ 910 (1005)
.......|++.|++||.+....++.++|+|||||++|++++|..||...+.....
T Consensus 170 -------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~ 224 (293)
T cd06647 170 -------------------------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL 224 (293)
T ss_pred -------------------------cccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhe
Confidence 0112346888999999998888889999999999999999999999876654443
Q ss_pred HHHHh-CCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCC
Q 001847 911 ANILH-KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 964 (1005)
Q Consensus 911 ~~i~~-~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~ 964 (1005)
..+.. +...+......+..+.+||.+||..+|++||+ +.+++.|+||+..
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~----~~~il~h~~~~~~ 275 (293)
T cd06647 225 YLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGS----AKELLQHPFLKIA 275 (293)
T ss_pred eehhcCCCCCCCCccccCHHHHHHHHHHccCChhhCcC----HHHHhcCHHHhcC
Confidence 33322 22223333345778999999999999999999 9999999999864
No 232
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1.6e-34 Score=314.59 Aligned_cols=251 Identities=24% Similarity=0.373 Sum_probs=207.3
Q ss_pred ccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 001847 670 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 749 (1005)
Q Consensus 670 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 749 (1005)
+.++|++.+.||+|+||.||++.+. .+..+|+|.+.... .....+.+|+.+++.++||||+++++++...+.+|+
T Consensus 2 ~~~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~i 76 (256)
T cd05114 2 NPSELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGA----MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYI 76 (256)
T ss_pred CHHHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCC----ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEE
Confidence 3467999999999999999999884 45679999876442 123567889999999999999999999999999999
Q ss_pred EEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 001847 750 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 829 (1005)
Q Consensus 750 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~ 829 (1005)
||||+++++|.+++.... ..+++..+..++.|++.||.|||++||+|+||||+||+++.++.+||+|||.+........
T Consensus 77 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~ 155 (256)
T cd05114 77 VTEFMENGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY 155 (256)
T ss_pred EEEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCce
Confidence 999999999999987543 3589999999999999999999999999999999999999999999999998854321100
Q ss_pred CCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHH
Q 001847 830 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQK 908 (1005)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~Pf~~~~~~~ 908 (1005)
.......++..|+|||.+.+..++.++||||||+++|+|++ |+.||...+..+
T Consensus 156 --------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~ 209 (256)
T cd05114 156 --------------------------TSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYE 209 (256)
T ss_pred --------------------------eccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence 00112235668999999988888999999999999999999 999998888777
Q ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHc
Q 001847 909 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 957 (1005)
Q Consensus 909 ~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 957 (1005)
....+..+... ......+..+.+|+.+||..+|++||+ +.++++
T Consensus 210 ~~~~i~~~~~~-~~~~~~~~~~~~li~~c~~~~p~~Rps----~~~l~~ 253 (256)
T cd05114 210 VVEMISRGFRL-YRPKLASMTVYEVMYSCWHEKPEGRPT----FAELLR 253 (256)
T ss_pred HHHHHHCCCCC-CCCCCCCHHHHHHHHHHccCCcccCcC----HHHHHH
Confidence 77777665322 222345778999999999999999999 666654
No 233
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.5e-35 Score=351.16 Aligned_cols=268 Identities=24% Similarity=0.323 Sum_probs=199.4
Q ss_pred cCCccccccccccCcEEEEEEEEcCCC-eEEEEE--------------EeecccccChHHHHHHHHHHHHHHhCCCCCcc
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSG-QYFAMK--------------AMDKGVMLNRNKVHRACAEREILDMLDHPFVP 735 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~-~~valK--------------~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv 735 (1005)
.++|++++.||+|+||.||+|..+... ...+.| .+.+...........+.+|+.+++.++||||+
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv 226 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL 226 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence 468999999999999999998864332 122222 11111111223445678899999999999999
Q ss_pred eEEEEEEeCCeEEEEEeccCCCchhhHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCc
Q 001847 736 ALYASFQTKTHVCLITDYCPGGELFLLLDRQP---TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH 812 (1005)
Q Consensus 736 ~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~---~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~ 812 (1005)
++++++...+..|+|++++ +++|..++.... ........++.++.||+.||.|||++|||||||||+|||++.++.
T Consensus 227 ~l~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~~ 305 (501)
T PHA03210 227 KIEEILRSEANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGK 305 (501)
T ss_pred cEeEEEEECCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCC
Confidence 9999999999999999999 667777765321 122446778889999999999999999999999999999999999
Q ss_pred EEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHH
Q 001847 813 VSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLY 892 (1005)
Q Consensus 813 vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~ 892 (1005)
+||+|||++........ .......||+.|+|||++.+..++.++|||||||++|
T Consensus 306 vkL~DFGla~~~~~~~~--------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ 359 (501)
T PHA03210 306 IVLGDFGTAMPFEKERE--------------------------AFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILL 359 (501)
T ss_pred EEEEeCCCceecCcccc--------------------------cccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHH
Confidence 99999999865431110 1112357999999999999989999999999999999
Q ss_pred HHHcCCCCCCC-C--ChHHHHHHHHhCC----CCCC--------------------------CCCCCCHHHHHHHHHccc
Q 001847 893 EMLYGYTPFRG-K--TRQKTFANILHKD----LKFP--------------------------SSTPTSLHAKQLMYRLLH 939 (1005)
Q Consensus 893 eLltG~~Pf~~-~--~~~~~~~~i~~~~----~~~~--------------------------~~~~~s~~l~~Ll~~~L~ 939 (1005)
+|++|..++.+ . .....+..++... ..++ .....+..+.++|.+||+
T Consensus 360 ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~ 439 (501)
T PHA03210 360 DMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLT 439 (501)
T ss_pred HHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhc
Confidence 99998765432 2 2222222222210 0000 011245567888999999
Q ss_pred cCcCccCCChhcHHHHHcCCCCCCCChhhh
Q 001847 940 RDPKSRLGSHEGANEIKKHPFFKGVNWALV 969 (1005)
Q Consensus 940 ~dP~~Rpt~~~~a~elL~hpff~~~~~~~~ 969 (1005)
+||.+||+ +.++|.||||.......+
T Consensus 440 ~DP~~Rps----a~elL~hp~f~~~~~~~~ 465 (501)
T PHA03210 440 FDWHLRPG----AAELLALPLFSAEEEEEI 465 (501)
T ss_pred cCcccCcC----HHHHhhChhhhcCCchHH
Confidence 99999999 999999999998765544
No 234
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1.4e-34 Score=334.75 Aligned_cols=258 Identities=23% Similarity=0.308 Sum_probs=208.2
Q ss_pred cccccCCccccccccccCcEEEEEEEEcCC-----CeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-CCCcceEEEE
Q 001847 667 EQINLQHFRPIKPLGSGDTGSVHLVELCGS-----GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYAS 740 (1005)
Q Consensus 667 ~~i~~~~y~~~~~LG~G~~g~Vy~a~~~~~-----~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~ 740 (1005)
+.+..++|++.+.||.|+||.||++.+... +..||||.+.... .......+.+|+.+++.++ ||||++++++
T Consensus 32 ~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~ 109 (400)
T cd05105 32 WEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA--RSSEKQALMSELKIMTHLGPHLNIVNLLGA 109 (400)
T ss_pred eeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC--ChHHHHHHHHHHHHHHhcCCCCCeeeEEEE
Confidence 345578999999999999999999987433 3579999987542 2344567889999999996 9999999999
Q ss_pred EEeCCeEEEEEeccCCCchhhHHhhCC-----------------------------------------------------
Q 001847 741 FQTKTHVCLITDYCPGGELFLLLDRQP----------------------------------------------------- 767 (1005)
Q Consensus 741 ~~~~~~~~lV~E~~~ggsL~~~l~~~~----------------------------------------------------- 767 (1005)
+...+.+|+|||||++|+|.+++..+.
T Consensus 110 ~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (400)
T cd05105 110 CTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYV 189 (400)
T ss_pred EccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccc
Confidence 999999999999999999998876421
Q ss_pred -----------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEE
Q 001847 768 -----------------------------------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVL 806 (1005)
Q Consensus 768 -----------------------------------------~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NIL 806 (1005)
...+++..+..++.||+.||.|||++||+|+||||+|||
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nil 269 (400)
T cd05105 190 PMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVL 269 (400)
T ss_pred hhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEE
Confidence 124778888999999999999999999999999999999
Q ss_pred EecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHH
Q 001847 807 LQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWA 886 (1005)
Q Consensus 807 i~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwS 886 (1005)
++.++.+||+|||++........ ........+++.|+|||.+.+..++.++||||
T Consensus 270 l~~~~~~kL~DfGla~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwS 324 (400)
T cd05105 270 LAQGKIVKICDFGLARDIMHDSN-------------------------YVSKGSTFLPVKWMAPESIFDNLYTTLSDVWS 324 (400)
T ss_pred EeCCCEEEEEeCCcceecccccc-------------------------ccccCCcCCCcceEChhhhcCCCCCchhhHHH
Confidence 99999999999999854321110 01112345778899999998888999999999
Q ss_pred HHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhc
Q 001847 887 LGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 951 (1005)
Q Consensus 887 lGvll~eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~ 951 (1005)
|||++|+|++ |..||............+......+....++..+.+|+.+||..+|++||++.++
T Consensus 325 lGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l 390 (400)
T cd05105 325 YGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHL 390 (400)
T ss_pred HHHHHHHHHHCCCCCCcccchhHHHHHHHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHH
Confidence 9999999996 9999987655444444444444444445578899999999999999999995553
No 235
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=7.8e-35 Score=330.80 Aligned_cols=259 Identities=27% Similarity=0.421 Sum_probs=209.3
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC-----C
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK-----T 745 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~-----~ 745 (1005)
..+|++.+.||.|+||.||++.+..+++.||+|.+.... ........+.+|+.+++.++|+||+++++++... .
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAF-DNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFN 82 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccc-cccchhHHHHHHHHHHHhcCCCCccchHHheecccccccC
Confidence 358999999999999999999999999999999987542 2333445677899999999999999999987644 3
Q ss_pred eEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 001847 746 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 825 (1005)
Q Consensus 746 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~ 825 (1005)
.+|+||||+ +++|.+++... ..+++..+..++.||+.||.|||++|++|+||||+||+++.++.+||+|||++....
T Consensus 83 ~~~lv~e~~-~~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~ 159 (337)
T cd07858 83 DVYIVYELM-DTDLHQIIRSS--QTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTS 159 (337)
T ss_pred cEEEEEeCC-CCCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccC
Confidence 589999999 57898888654 459999999999999999999999999999999999999999999999999985432
Q ss_pred CCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001847 826 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGK 904 (1005)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlGvll~eLltG~~Pf~~~ 904 (1005)
... .......++..|+|||.+.. ..++.++|||||||++|+|++|+.||.+.
T Consensus 160 ~~~---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 212 (337)
T cd07858 160 EKG---------------------------DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGK 212 (337)
T ss_pred CCc---------------------------ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCC
Confidence 110 01123457889999998865 45788999999999999999999999876
Q ss_pred ChHHHHHHHHhC--C--------------------CC---C----CCCCCCCHHHHHHHHHccccCcCccCCChhcHHHH
Q 001847 905 TRQKTFANILHK--D--------------------LK---F----PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 955 (1005)
Q Consensus 905 ~~~~~~~~i~~~--~--------------------~~---~----~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~el 955 (1005)
+.......+... . .. . .....++..+.+||.+||+.+|++||+ ++++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps----~~el 288 (337)
T cd07858 213 DYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRIT----VEEA 288 (337)
T ss_pred ChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccC----HHHH
Confidence 544333222210 0 00 0 011346778899999999999999999 9999
Q ss_pred HcCCCCCCC
Q 001847 956 KKHPFFKGV 964 (1005)
Q Consensus 956 L~hpff~~~ 964 (1005)
++||||+.+
T Consensus 289 l~h~~~~~~ 297 (337)
T cd07858 289 LAHPYLASL 297 (337)
T ss_pred HcCcchhhh
Confidence 999999875
No 236
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=2.4e-34 Score=319.27 Aligned_cols=253 Identities=23% Similarity=0.329 Sum_probs=209.4
Q ss_pred cccCCccccccccccCcEEEEEEEE-----cCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 001847 669 INLQHFRPIKPLGSGDTGSVHLVEL-----CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 743 (1005)
Q Consensus 669 i~~~~y~~~~~LG~G~~g~Vy~a~~-----~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 743 (1005)
|+.+.|.+.+.||+|+||.||++.+ ..++..+|+|.+... .......+.+|+.++++++||||+++++++..
T Consensus 2 ~~~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 78 (288)
T cd05093 2 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA---SDNARKDFHREAELLTNLQHEHIVKFYGVCVE 78 (288)
T ss_pred CchHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc---CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec
Confidence 4457899999999999999999986 234567999988643 34456678899999999999999999999999
Q ss_pred CCeEEEEEeccCCCchhhHHhhCC-----------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCc
Q 001847 744 KTHVCLITDYCPGGELFLLLDRQP-----------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH 812 (1005)
Q Consensus 744 ~~~~~lV~E~~~ggsL~~~l~~~~-----------~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~ 812 (1005)
.+.+|+||||+++++|.+++.... ...+++..+..++.||+.||+|||++|++||||||+|||+++++.
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~ 158 (288)
T cd05093 79 GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLL 158 (288)
T ss_pred CCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCc
Confidence 999999999999999999987432 124899999999999999999999999999999999999999999
Q ss_pred EEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHH
Q 001847 813 VSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLY 892 (1005)
Q Consensus 813 vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~ 892 (1005)
++|+|||++........ ........+++.|+|||++.+..++.++|||||||++|
T Consensus 159 ~kl~dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~ 213 (288)
T cd05093 159 VKIGDFGMSRDVYSTDY-------------------------YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLW 213 (288)
T ss_pred EEeccCCccccccCCce-------------------------eecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHH
Confidence 99999999854321110 00112234578899999998888899999999999999
Q ss_pred HHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChh
Q 001847 893 EMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 950 (1005)
Q Consensus 893 eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~ 950 (1005)
+|++ |..||...........+..+.... .....+..+.+|+.+||+.+|.+||++.+
T Consensus 214 ~l~t~g~~p~~~~~~~~~~~~i~~~~~~~-~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ 271 (288)
T cd05093 214 EIFTYGKQPWYQLSNNEVIECITQGRVLQ-RPRTCPKEVYDLMLGCWQREPHMRLNIKE 271 (288)
T ss_pred HHHhCCCCCCCCCCHHHHHHHHHcCCcCC-CCCCCCHHHHHHHHHHccCChhhCCCHHH
Confidence 9998 999998888777777776654322 22346788999999999999999999443
No 237
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=1.8e-34 Score=318.17 Aligned_cols=258 Identities=17% Similarity=0.231 Sum_probs=208.7
Q ss_pred cccCCccccccccccCcEEEEEEEEcC-----CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 001847 669 INLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 743 (1005)
Q Consensus 669 i~~~~y~~~~~LG~G~~g~Vy~a~~~~-----~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 743 (1005)
+..++|++.+.||+|+||.||++.+.. ++..+|+|.+.... .......+.+|+.+++.++||||+++++++..
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~ 80 (277)
T cd05062 3 VAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ 80 (277)
T ss_pred ccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC
Confidence 456789999999999999999998742 35679999886432 22344567889999999999999999999999
Q ss_pred CCeEEEEEeccCCCchhhHHhhCCC--------CCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEE
Q 001847 744 KTHVCLITDYCPGGELFLLLDRQPT--------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSL 815 (1005)
Q Consensus 744 ~~~~~lV~E~~~ggsL~~~l~~~~~--------~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL 815 (1005)
....++||||+.+++|.+++..... ..++...+..++.|++.||.|||+.|++|+||||+||++++++.++|
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 81 GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred CCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEE
Confidence 9999999999999999999865321 23577889999999999999999999999999999999999999999
Q ss_pred EeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHH
Q 001847 816 TDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML 895 (1005)
Q Consensus 816 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLl 895 (1005)
+|||++........ ........+++.|+|||++.+..++.++|||||||++|+|+
T Consensus 161 ~dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~ 215 (277)
T cd05062 161 GDFGMTRDIYETDY-------------------------YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 215 (277)
T ss_pred CCCCCccccCCcce-------------------------eecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHH
Confidence 99998854321100 00011234578899999998888999999999999999999
Q ss_pred c-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcC
Q 001847 896 Y-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 958 (1005)
Q Consensus 896 t-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~h 958 (1005)
+ |..||.+.........+...... ......+..+.+|+.+||+.+|++||+ +.+++++
T Consensus 216 ~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rps----~~e~l~~ 274 (277)
T cd05062 216 TLAEQPYQGMSNEQVLRFVMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRPS----FLEIISS 274 (277)
T ss_pred cCCCCCCCCCCHHHHHHHHHcCCcC-CCCCCCCHHHHHHHHHHcCCChhhCcC----HHHHHHH
Confidence 8 78999888777766666554432 223346788999999999999999999 6666643
No 238
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.3e-34 Score=316.09 Aligned_cols=248 Identities=24% Similarity=0.327 Sum_probs=210.9
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
.+|++++.||.|+||.||++.+.. +..+++|.+... .......+..|+.+++.++|+||+++++++......|+||
T Consensus 6 ~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 81 (261)
T cd05148 6 EEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSD---DLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIIT 81 (261)
T ss_pred HHHHHhhhhccCCCccEEEeEecC-CCcEEEEecccc---chhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEE
Confidence 479999999999999999999977 889999998754 2334557788999999999999999999999999999999
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 831 (1005)
||+++++|.+++.......++...+..++.||+.||.|||++|++|+||||+||+++.++.+||+|||.+........
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~-- 159 (261)
T cd05148 82 ELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVY-- 159 (261)
T ss_pred eecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCccc--
Confidence 999999999999876566789999999999999999999999999999999999999999999999998854321100
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHHHH
Q 001847 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTF 910 (1005)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~Pf~~~~~~~~~ 910 (1005)
......++..|++||.+....++.++||||||+++|+|++ |+.||.+....+.+
T Consensus 160 -------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~ 214 (261)
T cd05148 160 -------------------------LSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVY 214 (261)
T ss_pred -------------------------cccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHH
Confidence 0112235678999999988888999999999999999998 89999888777777
Q ss_pred HHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhc
Q 001847 911 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 951 (1005)
Q Consensus 911 ~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~ 951 (1005)
..+... ...+....++..+.+++.+||+.+|.+||++.++
T Consensus 215 ~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l 254 (261)
T cd05148 215 DQITAG-YRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKAL 254 (261)
T ss_pred HHHHhC-CcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHH
Confidence 666643 3344445678899999999999999999994443
No 239
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=1.5e-34 Score=321.53 Aligned_cols=257 Identities=24% Similarity=0.367 Sum_probs=209.7
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC--CeEE
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--THVC 748 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~--~~~~ 748 (1005)
.++|++.+.||.|+||.||+|.+..+++.+++|.++..... ......+.+|+.++++++||||+++++++... +..|
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK-EGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIY 82 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc-ccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEE
Confidence 35899999999999999999999989999999999754322 22334567899999999999999999998877 8999
Q ss_pred EEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 001847 749 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 828 (1005)
Q Consensus 749 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~ 828 (1005)
+||||+. ++|.+++.... ..+++..++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||++.......
T Consensus 83 lv~e~~~-~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 160 (293)
T cd07843 83 MVMEYVE-HDLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPL 160 (293)
T ss_pred EEehhcC-cCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCc
Confidence 9999995 59988887543 358999999999999999999999999999999999999999999999999885433110
Q ss_pred CCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCC-CCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001847 829 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEMLYGYTPFRGKTRQ 907 (1005)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~-~~~~sDIwSlGvll~eLltG~~Pf~~~~~~ 907 (1005)
.......+++.|+|||.+.+.. ++.++||||||+++|+|++|..||......
T Consensus 161 ---------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~ 213 (293)
T cd07843 161 ---------------------------KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEI 213 (293)
T ss_pred ---------------------------cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChH
Confidence 1112345788999999987643 578999999999999999999999887766
Q ss_pred HHHHHHHhCCC-------------------CC---------CCCCC--CCHHHHHHHHHccccCcCccCCChhcHHHHHc
Q 001847 908 KTFANILHKDL-------------------KF---------PSSTP--TSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 957 (1005)
Q Consensus 908 ~~~~~i~~~~~-------------------~~---------~~~~~--~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 957 (1005)
....++..... .+ ..... .+..+.+||.+||+.+|++||+ +.++|.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t----~~ell~ 289 (293)
T cd07843 214 DQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRIS----AEDALK 289 (293)
T ss_pred HHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCC----HHHHhc
Confidence 55554432100 00 00111 3777899999999999999999 999999
Q ss_pred CCCC
Q 001847 958 HPFF 961 (1005)
Q Consensus 958 hpff 961 (1005)
||||
T Consensus 290 ~~~f 293 (293)
T cd07843 290 HPYF 293 (293)
T ss_pred CCCC
Confidence 9998
No 240
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=2.3e-34 Score=319.75 Aligned_cols=256 Identities=27% Similarity=0.392 Sum_probs=203.1
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 750 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 750 (1005)
.++|++++.||+|+||.||++.+..++..|++|.+..... ......+.+|+.+++.++|+||+++++++...+..|+|
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 81 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTE--EGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFV 81 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc--CCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEE
Confidence 3689999999999999999999999999999999875422 22233566899999999999999999999999999999
Q ss_pred EeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001847 751 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (1005)
Q Consensus 751 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 830 (1005)
|||+ +++|.+++.... ..++...++.++.||+.||.|||+.||+|+||||+||+++.++.++|+|||++.......
T Consensus 82 ~e~~-~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-- 157 (291)
T cd07870 82 FEYM-HTDLAQYMIQHP-GGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPS-- 157 (291)
T ss_pred Eecc-cCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCC--
Confidence 9999 567777665432 347888899999999999999999999999999999999999999999999885422110
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCChH-H
Q 001847 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQ-K 908 (1005)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~-~ 908 (1005)
.......+++.|+|||.+.+. .++.++|||||||++|+|++|..||.+.... +
T Consensus 158 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~ 212 (291)
T cd07870 158 -------------------------QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFE 212 (291)
T ss_pred -------------------------CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHH
Confidence 011223578899999998754 4778999999999999999999999765432 2
Q ss_pred HHHHHHhC-C----------------------CCCC-------CCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcC
Q 001847 909 TFANILHK-D----------------------LKFP-------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 958 (1005)
Q Consensus 909 ~~~~i~~~-~----------------------~~~~-------~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~h 958 (1005)
.+..+... . ...+ .....+..+.+|+.+||..||.+||| +.+++.|
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t----~~~~l~h 288 (291)
T cd07870 213 QLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRIS----AQDALLH 288 (291)
T ss_pred HHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcC----HHHHhcC
Confidence 22222110 0 0000 00123567889999999999999999 9999999
Q ss_pred CCC
Q 001847 959 PFF 961 (1005)
Q Consensus 959 pff 961 (1005)
|||
T Consensus 289 ~~~ 291 (291)
T cd07870 289 PYF 291 (291)
T ss_pred CCC
Confidence 998
No 241
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=1.5e-34 Score=319.66 Aligned_cols=255 Identities=25% Similarity=0.419 Sum_probs=209.4
Q ss_pred ccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEec
Q 001847 674 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 753 (1005)
Q Consensus 674 y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~ 753 (1005)
|++.+.||.|++|.||++.+..+|..||+|.+..... .......+.+|+.+++.++|||++++++++...+..|++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~ 79 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETE-DEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEF 79 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccc-cccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEec
Confidence 6788999999999999999999999999999875432 222335677899999999999999999999999999999999
Q ss_pred cCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCC
Q 001847 754 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 833 (1005)
Q Consensus 754 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~ 833 (1005)
+ +++|.+++.......+++..+..++.||+.||.|||+++++|+||+|+||+++.++.++|+|||.+.......
T Consensus 80 ~-~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~----- 153 (283)
T cd07835 80 L-DLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPV----- 153 (283)
T ss_pred c-CcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCc-----
Confidence 9 5789999877654468999999999999999999999999999999999999999999999999985432110
Q ss_pred cchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001847 834 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 912 (1005)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~~ 912 (1005)
.......+++.|+|||++.+. .++.++||||||+++|+|++|+.||.+.+.......
T Consensus 154 ----------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~ 211 (283)
T cd07835 154 ----------------------RTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFR 211 (283)
T ss_pred ----------------------cccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 011223468899999988664 468899999999999999999999988766554444
Q ss_pred HHhCCC------------------CCC---------CCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCC
Q 001847 913 ILHKDL------------------KFP---------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 961 (1005)
Q Consensus 913 i~~~~~------------------~~~---------~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff 961 (1005)
+.+... .++ ....++..+.++|.+||+.+|.+||+ +.+++.||||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~~il~~~~~ 283 (283)
T cd07835 212 IFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRIS----AKAALQHPYF 283 (283)
T ss_pred HHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcC----HHHHhcCCCC
Confidence 332100 000 11345678899999999999999999 9999999998
No 242
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-36 Score=327.20 Aligned_cols=257 Identities=29% Similarity=0.475 Sum_probs=219.9
Q ss_pred cccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCC
Q 001847 677 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPG 756 (1005)
Q Consensus 677 ~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~g 756 (1005)
.+.||+|.||+||-+.++++|+.||||++.+..+..+.. ..+.+|..||.++.||.||.+--.|+..+.+++|||.+.|
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqe-sqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G 647 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQE-SQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG 647 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchH-HHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc
Confidence 378999999999999999999999999999876655444 7889999999999999999999999999999999999955
Q ss_pred CchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecC---CcEEEEeccCCcccCCCCCCCCC
Q 001847 757 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN---GHVSLTDFDLSCLTSCKPQLLLP 833 (1005)
Q Consensus 757 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~---g~vkL~DFG~a~~~~~~~~~~~~ 833 (1005)
+..+++-....+.|++...+.++.||+.||.|||-+||+|+||||+|||+.+. -.+||||||+|++++...
T Consensus 648 -DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks----- 721 (888)
T KOG4236|consen 648 -DMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS----- 721 (888)
T ss_pred -hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhh-----
Confidence 55455544556779999999999999999999999999999999999999864 379999999998765321
Q ss_pred cchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHH
Q 001847 834 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI 913 (1005)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~~i 913 (1005)
-..+++|||.|+|||++....|+..-|+||.|+++|--++|..||..+. ++-..|
T Consensus 722 -----------------------FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdE--dIndQI 776 (888)
T KOG4236|consen 722 -----------------------FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDE--DINDQI 776 (888)
T ss_pred -----------------------hhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCcc--chhHHh
Confidence 1346799999999999999999999999999999999999999997653 344455
Q ss_pred HhCCCCCC--CCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCC-hhhh
Q 001847 914 LHKDLKFP--SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN-WALV 969 (1005)
Q Consensus 914 ~~~~~~~~--~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~-~~~~ 969 (1005)
....+-+| .+..++.++.+||..+|+..-.+|.+ +.+.|.|||+++.. |-++
T Consensus 777 QNAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRys----vdk~lsh~Wlq~yq~w~DL 831 (888)
T KOG4236|consen 777 QNAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRYS----VDKSLSHPWLQDYQTWLDL 831 (888)
T ss_pred hccccccCCCchhhcCHHHHHHHHHHHHHHHHHhcc----hHhhccchhhhcchHHHHH
Confidence 55544444 34568899999999999999999999 99999999999843 5555
No 243
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=1.7e-34 Score=316.90 Aligned_cols=248 Identities=31% Similarity=0.494 Sum_probs=200.2
Q ss_pred CCccccccc--cccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEE
Q 001847 672 QHFRPIKPL--GSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVC 748 (1005)
Q Consensus 672 ~~y~~~~~L--G~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~ 748 (1005)
+.|.+.+.+ |+|+||.||++.++.++..+|+|.+....... .|+.+...+ +|+||++++++|...+..|
T Consensus 14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~--------~e~~~~~~~~~h~~iv~~~~~~~~~~~~~ 85 (267)
T PHA03390 14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA--------IEPMVHQLMKDNPNFIKLYYSVTTLKGHV 85 (267)
T ss_pred HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch--------hhHHHHHHhhcCCCEEEEEEEEecCCeeE
Confidence 467777776 99999999999999999999999987542111 122222222 7999999999999999999
Q ss_pred EEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCC-cEEEEeccCCcccCCC
Q 001847 749 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-HVSLTDFDLSCLTSCK 827 (1005)
Q Consensus 749 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g-~vkL~DFG~a~~~~~~ 827 (1005)
+||||+++++|.+++... ..+++..+..++.||+.||.|||+.|++|+||||+||+++.++ .++|+|||++.....
T Consensus 86 iv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~- 162 (267)
T PHA03390 86 LIMDYIKDGDLFDLLKKE--GKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGT- 162 (267)
T ss_pred EEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCC-
Confidence 999999999999999765 3699999999999999999999999999999999999999988 999999998754321
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001847 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 907 (1005)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~ 907 (1005)
.....|+..|+|||++.+..++.++||||||+++|+|++|..||......
T Consensus 163 ------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~ 212 (267)
T PHA03390 163 ------------------------------PSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDE 212 (267)
T ss_pred ------------------------------CccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcc
Confidence 11235788999999998888999999999999999999999999765433
Q ss_pred HH-HHHHHhC-CCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCC
Q 001847 908 KT-FANILHK-DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 963 (1005)
Q Consensus 908 ~~-~~~i~~~-~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~ 963 (1005)
.. ...+... ....+.....+..+.+||.+||+.+|.+||+. ++++|+||||++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~---~~~~l~h~~~~~ 267 (267)
T PHA03390 213 ELDLESLLKRQQKKLPFIKNVSKNANDFVQSMLKYNINYRLTN---YNEIIKHPFLKI 267 (267)
T ss_pred hhhHHHHHHhhcccCCcccccCHHHHHHHHHHhccChhhCCch---HHHHhcCCcccC
Confidence 21 1111111 11122223578899999999999999999961 699999999974
No 244
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=2.3e-34 Score=314.27 Aligned_cols=250 Identities=25% Similarity=0.344 Sum_probs=207.9
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 001847 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 748 (1005)
Q Consensus 669 i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 748 (1005)
+..++|++.+.||+|++|.||++.+. +++.||+|.++.... ....+.+|+.++++++|+||+++++++...+..|
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 77 (261)
T cd05068 3 IDRTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTM----DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIY 77 (261)
T ss_pred cchhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcc----cHHHHHHHHHHHHHCCCCCccceeEEEecCCCee
Confidence 44568999999999999999999974 457899999875422 2456778999999999999999999999999999
Q ss_pred EEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 001847 749 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 828 (1005)
Q Consensus 749 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~ 828 (1005)
+||||+.+++|.+++.......++...+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++.......
T Consensus 78 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 157 (261)
T cd05068 78 IVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDI 157 (261)
T ss_pred eeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCc
Confidence 99999999999999976554568999999999999999999999999999999999999999999999999885543110
Q ss_pred CCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChH
Q 001847 829 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 907 (1005)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~Pf~~~~~~ 907 (1005)
. ........+..|+|||++.+..++.++||||||+++|+|++ |+.||.+....
T Consensus 158 ~--------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~ 211 (261)
T cd05068 158 Y--------------------------EAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA 211 (261)
T ss_pred c--------------------------cccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH
Confidence 0 00111223468999999988888999999999999999998 99999888777
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChh
Q 001847 908 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 950 (1005)
Q Consensus 908 ~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~ 950 (1005)
.....+... ...+.....+..+.+++.+||+.+|.+||++.+
T Consensus 212 ~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~ 253 (261)
T cd05068 212 EVLQQVDQG-YRMPCPPGCPKELYDIMLDCWKEDPDDRPTFET 253 (261)
T ss_pred HHHHHHHcC-CCCCCCCcCCHHHHHHHHHHhhcCcccCCCHHH
Confidence 666665443 333444557889999999999999999999433
No 245
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=1.9e-34 Score=324.36 Aligned_cols=250 Identities=26% Similarity=0.428 Sum_probs=190.4
Q ss_pred ccccccCcEEEEEEEEcC--CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEE--eCCeEEEEEec
Q 001847 678 KPLGSGDTGSVHLVELCG--SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ--TKTHVCLITDY 753 (1005)
Q Consensus 678 ~~LG~G~~g~Vy~a~~~~--~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~--~~~~~~lV~E~ 753 (1005)
..||+|+||.||+|.+.. ++..||+|.+.... ....+.+|+.+++.++||||+++++++. ....+|+||||
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~ 81 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-----ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDY 81 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCC-----CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEee
Confidence 579999999999999754 56899999886532 1235678999999999999999999885 35678999999
Q ss_pred cCCCchhhHHhhC-------CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEE----ecCCcEEEEeccCCc
Q 001847 754 CPGGELFLLLDRQ-------PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL----QGNGHVSLTDFDLSC 822 (1005)
Q Consensus 754 ~~ggsL~~~l~~~-------~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi----~~~g~vkL~DFG~a~ 822 (1005)
+ +++|.+++... ....+++..++.++.||+.||.|||+.||+||||||+|||+ +.++.+||+|||++.
T Consensus 82 ~-~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07867 82 A-EHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred e-CCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeecccee
Confidence 9 56888777521 12348899999999999999999999999999999999999 456799999999986
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCC
Q 001847 823 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPF 901 (1005)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlGvll~eLltG~~Pf 901 (1005)
....... .........||+.|+|||++.+. .++.++|||||||++|+|++|++||
T Consensus 161 ~~~~~~~------------------------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f 216 (317)
T cd07867 161 LFNSPLK------------------------PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 216 (317)
T ss_pred ccCCCcc------------------------cccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCc
Confidence 5431110 01112345689999999998764 5788999999999999999999999
Q ss_pred CCCChH---------HHHHHHHhC--------------CCCC----------------------CCCCCCCHHHHHHHHH
Q 001847 902 RGKTRQ---------KTFANILHK--------------DLKF----------------------PSSTPTSLHAKQLMYR 936 (1005)
Q Consensus 902 ~~~~~~---------~~~~~i~~~--------------~~~~----------------------~~~~~~s~~l~~Ll~~ 936 (1005)
...... ..+..+... ...+ ......+..+.+||.+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 296 (317)
T cd07867 217 HCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQK 296 (317)
T ss_pred ccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHH
Confidence 653211 111111100 0000 0001234567899999
Q ss_pred ccccCcCccCCChhcHHHHHcCCCC
Q 001847 937 LLHRDPKSRLGSHEGANEIKKHPFF 961 (1005)
Q Consensus 937 ~L~~dP~~Rpt~~~~a~elL~hpff 961 (1005)
||+.||.+||| +.++|+||||
T Consensus 297 ~l~~dP~~R~t----~~e~l~hp~f 317 (317)
T cd07867 297 LLTMDPTKRIT----SEQALQDPYF 317 (317)
T ss_pred HhccCcccccC----HHHHhcCCCC
Confidence 99999999999 9999999998
No 246
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=1.6e-34 Score=319.92 Aligned_cols=257 Identities=29% Similarity=0.462 Sum_probs=210.2
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
++|++.+.||+|++|.||+|.+..+++.|++|.++... ........+.+|+++++.++|+||+++++++...+..|+||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 79 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESE-DDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVF 79 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhc-ccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEE
Confidence 37999999999999999999999999999999887542 23344567889999999999999999999999999999999
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 831 (1005)
||+.++.+..+.... ..++...+..++.||+.||.|||+.|++|+||+|+||+++.++.+||+|||++........
T Consensus 80 e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~-- 155 (288)
T cd07833 80 EYVERTLLELLEASP--GGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPA-- 155 (288)
T ss_pred ecCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc--
Confidence 999877666655443 4489999999999999999999999999999999999999999999999999855321110
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001847 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 910 (1005)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~ 910 (1005)
.......++..|+|||++.+. .++.++||||||+++|+|++|+.||.+.......
T Consensus 156 ------------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~ 211 (288)
T cd07833 156 ------------------------SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQL 211 (288)
T ss_pred ------------------------ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 011234678899999999887 7888999999999999999999999876655444
Q ss_pred HHHHhC--C-----------------CCCC-----------CCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCC
Q 001847 911 ANILHK--D-----------------LKFP-----------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 960 (1005)
Q Consensus 911 ~~i~~~--~-----------------~~~~-----------~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpf 960 (1005)
..+... . ..++ ....++.++.+||.+||..+|++||+ ++++++|||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~il~~~~ 287 (288)
T cd07833 212 YLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLT----CDELLQHPY 287 (288)
T ss_pred HHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhccc----HHHHhcCCC
Confidence 333210 0 0000 01123778999999999999999999 999999999
Q ss_pred C
Q 001847 961 F 961 (1005)
Q Consensus 961 f 961 (1005)
|
T Consensus 288 f 288 (288)
T cd07833 288 F 288 (288)
T ss_pred C
Confidence 8
No 247
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.9e-34 Score=318.74 Aligned_cols=268 Identities=44% Similarity=0.769 Sum_probs=216.6
Q ss_pred CccccccccccCcEEEEEEEEc---CCCeEEEEEEeeccccc-ChHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeE
Q 001847 673 HFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVML-NRNKVHRACAEREILDML-DHPFVPALYASFQTKTHV 747 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~---~~~~~valK~~~~~~~~-~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~ 747 (1005)
.|++.+.||.|+||.||+|.+. .+|..||+|++...... .......+.+|+.+++.+ +|+||+.++++|..+..+
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 4889999999999999999984 47899999998754322 223345677899999999 699999999999999999
Q ss_pred EEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001847 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (1005)
Q Consensus 748 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 827 (1005)
|+||||+++++|.+++... ..+++..+..++.||+.||.|||+.|++||||+|+|||++.++.++|+|||++......
T Consensus 81 ~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 158 (290)
T cd05613 81 HLILDYINGGELFTHLSQR--ERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHED 158 (290)
T ss_pred EEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceecccc
Confidence 9999999999999998764 45889999999999999999999999999999999999999999999999988543211
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC--CCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001847 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA--GHTSAVDWWALGILLYEMLYGYTPFRGKT 905 (1005)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~--~~~~~sDIwSlGvll~eLltG~~Pf~~~~ 905 (1005)
. ........|+..|+|||.+... .++.++||||||+++|+|++|..||....
T Consensus 159 ~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~ 212 (290)
T cd05613 159 E--------------------------VERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDG 212 (290)
T ss_pred c--------------------------ccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCC
Confidence 0 0111234688999999998653 46778999999999999999999996432
Q ss_pred h----HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCCh-hcHHHHHcCCCCCCCChhhhh
Q 001847 906 R----QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVR 970 (1005)
Q Consensus 906 ~----~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~hpff~~~~~~~~~ 970 (1005)
. ......+......++ ..++..+.+|+.+||..+|.+||+.. ..+.+++.||||+.++|..+.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~~~~ 280 (290)
T cd05613 213 EKNSQAEISRRILKSEPPYP--QEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKINWDDLA 280 (290)
T ss_pred ccccHHHHHHHhhccCCCCC--ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCCHHHHh
Confidence 2 233333333333333 33678899999999999999998432 349999999999999998773
No 248
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=2.3e-34 Score=317.38 Aligned_cols=254 Identities=28% Similarity=0.417 Sum_probs=215.1
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 752 (1005)
-|++++.||.|+||.||++.+..++..+|+|.+.... .......+.+|+.+++.++||||+++++++..++..|+|||
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 82 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE--AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 82 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEE
Confidence 4888999999999999999998899999999876432 23345678889999999999999999999999999999999
Q ss_pred ccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001847 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (1005)
Q Consensus 753 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 832 (1005)
|+.+++|..++.. ..++...+..++.|++.+|.|||+.|++|+||+|+||+++.++.++|+|||++.......
T Consensus 83 ~~~~~~l~~~i~~---~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~---- 155 (277)
T cd06641 83 YLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ---- 155 (277)
T ss_pred eCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccch----
Confidence 9999999999864 348999999999999999999999999999999999999999999999999875432110
Q ss_pred CcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001847 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 912 (1005)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~~ 912 (1005)
.......++..|+|||.+.+..++.++|+|||||++|+|++|..||...........
T Consensus 156 -----------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~ 212 (277)
T cd06641 156 -----------------------IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFL 212 (277)
T ss_pred -----------------------hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHH
Confidence 011234678899999999888888999999999999999999999987766555555
Q ss_pred HHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCC
Q 001847 913 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 963 (1005)
Q Consensus 913 i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~ 963 (1005)
+.....+. ....++..+.+++.+||+.+|.+||+ +.++++||||..
T Consensus 213 ~~~~~~~~-~~~~~~~~~~~~i~~~l~~~p~~Rp~----~~~~l~~~~~~~ 258 (277)
T cd06641 213 IPKNNPPT-LEGNYSKPLKEFVEACLNKEPSFRPT----AKELLKHKFIVR 258 (277)
T ss_pred HhcCCCCC-CCcccCHHHHHHHHHHccCChhhCcC----HHHHHhCHHHhh
Confidence 44332221 22346788999999999999999999 999999999986
No 249
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=6.3e-34 Score=320.49 Aligned_cols=255 Identities=26% Similarity=0.389 Sum_probs=217.6
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
..|...+.||+|+||.||++.+..++..+|+|.+.............+.+|+.+++.++|+|++++++++...+..|+||
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 104 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVM 104 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEE
Confidence 35899999999999999999998899999999987654434455667889999999999999999999999999999999
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 831 (1005)
||+. ++|.+++... ...+++..+..++.||+.||.|||++||+|+||+|+||+++.++.++|+|||++.....
T Consensus 105 e~~~-g~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~----- 177 (317)
T cd06635 105 EYCL-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASP----- 177 (317)
T ss_pred eCCC-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCC-----
Confidence 9995 5777777543 34589999999999999999999999999999999999999999999999998743210
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCccccccccc---CCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001847 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 908 (1005)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~---~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~ 908 (1005)
.....|++.|+|||++. ...++.++|||||||++|+|++|..||.......
T Consensus 178 --------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~ 231 (317)
T cd06635 178 --------------------------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS 231 (317)
T ss_pred --------------------------cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHH
Confidence 12345888999999974 3457889999999999999999999998877777
Q ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCC
Q 001847 909 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 963 (1005)
Q Consensus 909 ~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~ 963 (1005)
....+.............+..+.+|+.+||+.+|.+||+ +.++++|+|+..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt----~~~il~~~~~~~ 282 (317)
T cd06635 232 ALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQDRPT----SEELLKHMFVLR 282 (317)
T ss_pred HHHHHHhccCCCCCCccccHHHHHHHHHHccCCcccCcC----HHHHHhChhhhc
Confidence 677776665544444456788999999999999999999 999999999975
No 250
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=1.7e-34 Score=328.78 Aligned_cols=255 Identities=28% Similarity=0.433 Sum_probs=210.2
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC-----
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT----- 745 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~----- 745 (1005)
.++|++++.||+|+||.||++.+..++..||+|.+.... ........+.+|+.+++.++||||+++++++....
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 14 PDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred ccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccc-cchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 468999999999999999999999999999999986532 23334456788999999999999999999987543
Q ss_pred -eEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCccc
Q 001847 746 -HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 824 (1005)
Q Consensus 746 -~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~ 824 (1005)
..|+||||+ +++|..++.. ..+++..++.++.||+.||.|||+.||+||||||+||+++.++.++|+|||++...
T Consensus 93 ~~~~lv~e~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~ 168 (343)
T cd07880 93 HDFYLVMPFM-GTDLGKLMKH---EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQT 168 (343)
T ss_pred ceEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeccccccc
Confidence 468999999 8899888764 35899999999999999999999999999999999999999999999999988543
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001847 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRG 903 (1005)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlGvll~eLltG~~Pf~~ 903 (1005)
.. ......+++.|+|||.+.+ ..++.++|+|||||++|+|++|..||.+
T Consensus 169 ~~------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~ 218 (343)
T cd07880 169 DS------------------------------EMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKG 218 (343)
T ss_pred cc------------------------------CccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 21 0122357889999999876 4578899999999999999999999988
Q ss_pred CChHHHHHHHHhCCCCCC-----------------------------CCCCCCHHHHHHHHHccccCcCccCCChhcHHH
Q 001847 904 KTRQKTFANILHKDLKFP-----------------------------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 954 (1005)
Q Consensus 904 ~~~~~~~~~i~~~~~~~~-----------------------------~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~e 954 (1005)
.+....+..+.......+ .....+..+.++|.+||+.||.+||| +.+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t----~~~ 294 (343)
T cd07880 219 HDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRIT----AAE 294 (343)
T ss_pred CCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCC----HHH
Confidence 766555544433211100 01245678899999999999999999 999
Q ss_pred HHcCCCCCCC
Q 001847 955 IKKHPFFKGV 964 (1005)
Q Consensus 955 lL~hpff~~~ 964 (1005)
++.||||+..
T Consensus 295 ~l~~~~~~~~ 304 (343)
T cd07880 295 ALAHPYFEEF 304 (343)
T ss_pred HhcCccHhhh
Confidence 9999999974
No 251
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=1.5e-34 Score=324.83 Aligned_cols=260 Identities=27% Similarity=0.441 Sum_probs=204.8
Q ss_pred CccccccccccCcEEEEEEEEcC--CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC--CeEE
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCG--SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--THVC 748 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~--~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~--~~~~ 748 (1005)
+|++.+.||+|++|.||+|.+.. ++..||+|.+.............+.+|+.+++.++||||+++++++... ..+|
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 58899999999999999999988 8999999999874322333446677899999999999999999999988 8899
Q ss_pred EEEeccCCCchhhHHhhC---CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEec----CCcEEEEeccCC
Q 001847 749 LITDYCPGGELFLLLDRQ---PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG----NGHVSLTDFDLS 821 (1005)
Q Consensus 749 lV~E~~~ggsL~~~l~~~---~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~----~g~vkL~DFG~a 821 (1005)
+||||++ ++|.+++... ....+++..++.++.||+.||.|||++||+||||||+||+++. ++.+||+|||++
T Consensus 81 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~ 159 (316)
T cd07842 81 LLFDYAE-HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLA 159 (316)
T ss_pred EEEeCCC-cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence 9999995 5677666432 1236899999999999999999999999999999999999999 899999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCC
Q 001847 822 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTP 900 (1005)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlGvll~eLltG~~P 900 (1005)
......... ........+++.|+|||++.+. .++.++|||||||++|+|++|+.|
T Consensus 160 ~~~~~~~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~ 215 (316)
T cd07842 160 RLFNAPLKP------------------------LADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPI 215 (316)
T ss_pred cccCCCccc------------------------ccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCC
Confidence 654321110 1112335688999999988764 578899999999999999999999
Q ss_pred CCCCChHH---------HHHHHHh--------------------------CCCCCCC---------CCCCCHHHHHHHHH
Q 001847 901 FRGKTRQK---------TFANILH--------------------------KDLKFPS---------STPTSLHAKQLMYR 936 (1005)
Q Consensus 901 f~~~~~~~---------~~~~i~~--------------------------~~~~~~~---------~~~~s~~l~~Ll~~ 936 (1005)
|.+..... .+..++. ....++. ....+..+.++|.+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 295 (316)
T cd07842 216 FKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRK 295 (316)
T ss_pred CcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHH
Confidence 97644321 1111110 0001110 01356678999999
Q ss_pred ccccCcCccCCChhcHHHHHcCCCC
Q 001847 937 LLHRDPKSRLGSHEGANEIKKHPFF 961 (1005)
Q Consensus 937 ~L~~dP~~Rpt~~~~a~elL~hpff 961 (1005)
||+.||.+||| +.++++||||
T Consensus 296 ~l~~~P~~Rps----~~eil~~~~f 316 (316)
T cd07842 296 LLEYDPTKRIT----AEEALEHPYF 316 (316)
T ss_pred HhcCCcccCcC----HHHHhcCCCC
Confidence 99999999999 9999999998
No 252
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=1.9e-34 Score=324.55 Aligned_cols=254 Identities=24% Similarity=0.327 Sum_probs=206.2
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCe----EEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 001847 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQ----YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 744 (1005)
Q Consensus 669 i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~----~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 744 (1005)
+...+|++++.||+|+||.||++.+..++. .||+|.+... ........+.+|+.+++.++||||+++++++...
T Consensus 4 ~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~ 81 (316)
T cd05108 4 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMASVDNPHVCRLLGICLTS 81 (316)
T ss_pred cchhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEecccc--CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC
Confidence 345689999999999999999999866655 4899988643 2334456788899999999999999999988764
Q ss_pred CeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCccc
Q 001847 745 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 824 (1005)
Q Consensus 745 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~ 824 (1005)
..++|++|+.+|+|.+++.... ..++...+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++...
T Consensus 82 -~~~~v~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~ 159 (316)
T cd05108 82 -TVQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 159 (316)
T ss_pred -CceeeeecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccc
Confidence 5789999999999999997643 35888999999999999999999999999999999999999999999999998654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCC
Q 001847 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 903 (1005)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~Pf~~ 903 (1005)
...... .......++..|+|||++.+..++.++|||||||++|+|++ |..||.+
T Consensus 160 ~~~~~~-------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~ 214 (316)
T cd05108 160 GADEKE-------------------------YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 214 (316)
T ss_pred cCCCcc-------------------------eeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCC
Confidence 321110 00112234678999999998889999999999999999997 9999987
Q ss_pred CChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcH
Q 001847 904 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGA 952 (1005)
Q Consensus 904 ~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a 952 (1005)
....+. ..+......++....++..+.+++.+||..+|++||++.+++
T Consensus 215 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~ 262 (316)
T cd05108 215 IPASEI-SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELI 262 (316)
T ss_pred CCHHHH-HHHHhCCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 765554 445555445555556788899999999999999999944433
No 253
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=2.4e-34 Score=316.84 Aligned_cols=258 Identities=19% Similarity=0.248 Sum_probs=210.6
Q ss_pred ccccCCccccccccccCcEEEEEEEEcCC-----CeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEE
Q 001847 668 QINLQHFRPIKPLGSGDTGSVHLVELCGS-----GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 742 (1005)
Q Consensus 668 ~i~~~~y~~~~~LG~G~~g~Vy~a~~~~~-----~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~ 742 (1005)
.+..++|++.+.||+|+||.||++.+... +..|++|.+.... .......+.+|+.+++.++|+||+++++++.
T Consensus 2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~ 79 (277)
T cd05032 2 ELPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA--SMRERIEFLNEASVMKEFNCHHVVRLLGVVS 79 (277)
T ss_pred ccchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc--CHHHHHHHHHHHHHHHhCCCCceeEEEEEEc
Confidence 45677999999999999999999998644 4789999986542 2334456778999999999999999999999
Q ss_pred eCCeEEEEEeccCCCchhhHHhhCC--------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEE
Q 001847 743 TKTHVCLITDYCPGGELFLLLDRQP--------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVS 814 (1005)
Q Consensus 743 ~~~~~~lV~E~~~ggsL~~~l~~~~--------~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vk 814 (1005)
.....|+||||+.+++|.+++.... ...+++..+..++.||+.||.|||++||+|+||||+|||++.++.+|
T Consensus 80 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~k 159 (277)
T cd05032 80 TGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVK 159 (277)
T ss_pred CCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEE
Confidence 9999999999999999999986432 22467889999999999999999999999999999999999999999
Q ss_pred EEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHH
Q 001847 815 LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEM 894 (1005)
Q Consensus 815 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eL 894 (1005)
|+|||++........ ........++..|+|||.+....++.++|||||||++|+|
T Consensus 160 l~dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el 214 (277)
T cd05032 160 IGDFGMTRDIYETDY-------------------------YRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEM 214 (277)
T ss_pred ECCcccchhhccCcc-------------------------cccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHh
Confidence 999998854321100 0111233567889999999888889999999999999999
Q ss_pred Hc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHc
Q 001847 895 LY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 957 (1005)
Q Consensus 895 lt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 957 (1005)
++ |..||.+.+.......+.... ........+..+.+|+.+||+.+|++||| +.++++
T Consensus 215 ~t~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~l~~ 273 (277)
T cd05032 215 ATLAEQPYQGLSNEEVLKFVIDGG-HLDLPENCPDKLLELMRMCWQYNPKMRPT----FLEIVS 273 (277)
T ss_pred hccCCCCCccCCHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHcCCChhhCCC----HHHHHH
Confidence 98 999998877777666555332 22233346889999999999999999999 666553
No 254
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=2e-34 Score=327.29 Aligned_cols=260 Identities=25% Similarity=0.420 Sum_probs=207.0
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC-----C
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK-----T 745 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~-----~ 745 (1005)
.++|++.+.||+|+||.||++.+..+|+.||+|.+... ........+.+|+.+++.++|+||+++++++... .
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 81 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPF--EHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFN 81 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEeccc--ccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccc
Confidence 36899999999999999999999999999999998642 2233456677899999999999999999887643 3
Q ss_pred eEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 001847 746 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 825 (1005)
Q Consensus 746 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~ 825 (1005)
.+|+||||+ +++|..++.. ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++....
T Consensus 82 ~~~lv~e~~-~~~l~~~~~~---~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~ 157 (336)
T cd07849 82 DVYIVQELM-ETDLYKLIKT---QHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIAD 157 (336)
T ss_pred eEEEEehhc-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeecc
Confidence 589999999 5688877754 358999999999999999999999999999999999999999999999999985432
Q ss_pred CCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001847 826 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGK 904 (1005)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlGvll~eLltG~~Pf~~~ 904 (1005)
.... .........|++.|+|||.+.+ ..++.++|||||||++|+|++|+.||.+.
T Consensus 158 ~~~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~ 213 (336)
T cd07849 158 PEHD------------------------HTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGK 213 (336)
T ss_pred cccc------------------------ccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 1100 0001123568999999998754 46788999999999999999999999876
Q ss_pred ChHHHHHHHHhC----------------------CCCCCC-------CCCCCHHHHHHHHHccccCcCccCCChhcHHHH
Q 001847 905 TRQKTFANILHK----------------------DLKFPS-------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 955 (1005)
Q Consensus 905 ~~~~~~~~i~~~----------------------~~~~~~-------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~el 955 (1005)
+.......+... ..+... ....+..+.+||.+||+.+|++||+ +.++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt----~~e~ 289 (336)
T cd07849 214 DYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRIT----VEEA 289 (336)
T ss_pred CHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcC----HHHH
Confidence 544333222110 000000 1234667899999999999999999 9999
Q ss_pred HcCCCCCCC
Q 001847 956 KKHPFFKGV 964 (1005)
Q Consensus 956 L~hpff~~~ 964 (1005)
++||||+.+
T Consensus 290 l~hp~~~~~ 298 (336)
T cd07849 290 LAHPYLEQY 298 (336)
T ss_pred hcCcccccc
Confidence 999999975
No 255
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=3.1e-34 Score=316.60 Aligned_cols=251 Identities=27% Similarity=0.464 Sum_probs=202.3
Q ss_pred ccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeC--CeEEEE
Q 001847 674 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTK--THVCLI 750 (1005)
Q Consensus 674 y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~--~~~~lV 750 (1005)
|++++.||+|+||.||++.+..+++.||+|.++.... ... ......|+.++.++ +|+||+++++++... +.+++|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~-~~~-~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv 78 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFK-SLE-QVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALV 78 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccC-Cch-hhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEE
Confidence 7889999999999999999999999999999875422 222 22345788888888 599999999999987 899999
Q ss_pred EeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001847 751 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (1005)
Q Consensus 751 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 830 (1005)
|||+. ++|.+.+.... ..+++..++.++.||+.||.|||+.|++|+||+|+||+++. +.+||+|||++.......
T Consensus 79 ~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~-- 153 (282)
T cd07831 79 FELMD-MNLYELIKGRK-RPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKP-- 153 (282)
T ss_pred EecCC-ccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccccCC--
Confidence 99995 57877776532 45899999999999999999999999999999999999999 999999999885432110
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001847 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 909 (1005)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~ 909 (1005)
......+++.|+|||++.. ..++.++|||||||++|+|++|..||.+.+..+.
T Consensus 154 --------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~ 207 (282)
T cd07831 154 --------------------------PYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQ 207 (282)
T ss_pred --------------------------CcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHH
Confidence 1112457889999998654 4567899999999999999999999988776554
Q ss_pred HHHHHhC------------------CCCCCC---------CCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCC
Q 001847 910 FANILHK------------------DLKFPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 961 (1005)
Q Consensus 910 ~~~i~~~------------------~~~~~~---------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff 961 (1005)
+..+... ...++. ....+..+.+||.+||..+|++||+ +.++++||||
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~----~~~~l~~~~~ 282 (282)
T cd07831 208 IAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERIT----AKQALRHPYF 282 (282)
T ss_pred HHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccC----HHHHhhCCCC
Confidence 4444321 011111 1235788999999999999999999 9999999998
No 256
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=2.8e-34 Score=313.50 Aligned_cols=249 Identities=24% Similarity=0.384 Sum_probs=205.2
Q ss_pred ccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001847 668 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 747 (1005)
Q Consensus 668 ~i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 747 (1005)
.+..++|++++.||+|+||.||+|.+. .+..+|+|.+..... ....+.+|+.++++++|+|++++++++. ....
T Consensus 2 ~~~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~----~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~ 75 (260)
T cd05070 2 EIPRESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTM----SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPI 75 (260)
T ss_pred CCchHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCC----CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCc
Confidence 355678999999999999999999874 566799999876432 2356788999999999999999999875 4568
Q ss_pred EEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001847 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (1005)
Q Consensus 748 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 827 (1005)
|++|||+.+++|.+++.......+++..++.++.||+.||.|||++|++|+||||+||++++++.++|+|||++......
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05070 76 YIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDN 155 (260)
T ss_pred EEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCc
Confidence 99999999999999997655556899999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCh
Q 001847 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 906 (1005)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~Pf~~~~~ 906 (1005)
.. .......++..|+|||.+.+..++.++||||||+++|+|++ |..||.+.+.
T Consensus 156 ~~--------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~ 209 (260)
T cd05070 156 EY--------------------------TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN 209 (260)
T ss_pred cc--------------------------ccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCH
Confidence 00 01112235667999999988888999999999999999999 9999988777
Q ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCCh
Q 001847 907 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH 949 (1005)
Q Consensus 907 ~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~ 949 (1005)
.+....+... ...+.....+..+.+|+.+||..+|.+|||+.
T Consensus 210 ~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~ 251 (260)
T cd05070 210 REVLEQVERG-YRMPCPQDCPISLHELMLQCWKKDPEERPTFE 251 (260)
T ss_pred HHHHHHHHcC-CCCCCCCcCCHHHHHHHHHHcccCcccCcCHH
Confidence 7766666543 23333445678899999999999999999933
No 257
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=1.3e-34 Score=321.07 Aligned_cols=261 Identities=25% Similarity=0.361 Sum_probs=208.3
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCeEEE
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCL 749 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~l 749 (1005)
.++|...+.||+|+||.||++.+..+++.+|+|.+..... ......+.+|+.++.++. |+||+++++++...+..++
T Consensus 3 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~ 80 (288)
T cd06616 3 AEDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVD--EKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWI 80 (288)
T ss_pred HHHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccC--hHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEE
Confidence 3578888999999999999999999999999999875432 244567788999999995 9999999999999999999
Q ss_pred EEeccCCCchhhHHh---hCCCCCCCHHHHHHHHHHHHHHHHHHHHc-CcccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 001847 750 ITDYCPGGELFLLLD---RQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 825 (1005)
Q Consensus 750 V~E~~~ggsL~~~l~---~~~~~~l~~~~i~~i~~qil~aL~~LH~~-gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~ 825 (1005)
+|||+ +++|.++.. ......+++..+..++.|++.||+|||+. |++||||||+||+++.++.++|+|||++....
T Consensus 81 ~~e~~-~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 159 (288)
T cd06616 81 CMELM-DISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLV 159 (288)
T ss_pred EEecc-cCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhc
Confidence 99999 456555432 22335699999999999999999999975 99999999999999999999999999885422
Q ss_pred CCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC---CCCChhhHHHHHHHHHHHHcCCCCCC
Q 001847 826 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA---GHTSAVDWWALGILLYEMLYGYTPFR 902 (1005)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~---~~~~~sDIwSlGvll~eLltG~~Pf~ 902 (1005)
.. .......|++.|+|||++... .++.++|||||||++|+|++|+.||.
T Consensus 160 ~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~ 211 (288)
T cd06616 160 DS----------------------------IAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYP 211 (288)
T ss_pred cC----------------------------CccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCch
Confidence 10 011223578899999998766 67889999999999999999999997
Q ss_pred CCCh-HHHHHHHHhCCCC-CC--CCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCCh
Q 001847 903 GKTR-QKTFANILHKDLK-FP--SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 966 (1005)
Q Consensus 903 ~~~~-~~~~~~i~~~~~~-~~--~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~~ 966 (1005)
.... .+....+.....+ .+ ....++..+.+||.+||..+|++||+ ++++++||||+...+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt----~~~i~~~~~~~~~~~ 275 (288)
T cd06616 212 KWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPK----YKELLEHPFIKDYEE 275 (288)
T ss_pred hcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcC----HHHHhcChhhhchhh
Confidence 6542 2222233222221 11 12246789999999999999999999 999999999987543
No 258
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=3.4e-34 Score=320.43 Aligned_cols=256 Identities=22% Similarity=0.327 Sum_probs=209.6
Q ss_pred ccccCCccccccccccCcEEEEEEEEc-----CCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceEEEEE
Q 001847 668 QINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASF 741 (1005)
Q Consensus 668 ~i~~~~y~~~~~LG~G~~g~Vy~a~~~-----~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~ 741 (1005)
.+..++|.+.+.||+|+||.||++.+. .++..+|+|.++... .......+.+|+.+++++ +|+||+++++++
T Consensus 31 ~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 108 (302)
T cd05055 31 EFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA--HSSEREALMSELKIMSHLGNHENIVNLLGAC 108 (302)
T ss_pred cccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC--ChHHHHHHHHHHHHHHhccCCCCcceEEEEE
Confidence 355678999999999999999999862 345689999887542 233456788999999999 799999999999
Q ss_pred EeCCeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCC
Q 001847 742 QTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 821 (1005)
Q Consensus 742 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a 821 (1005)
...+..|+||||+.+++|.+++.......+++..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||++
T Consensus 109 ~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~ 188 (302)
T cd05055 109 TIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLA 188 (302)
T ss_pred ecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCccc
Confidence 99999999999999999999997654445899999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCC
Q 001847 822 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTP 900 (1005)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~P 900 (1005)
........ ........+++.|+|||.+.+..++.++|||||||++|+|++ |..|
T Consensus 189 ~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p 243 (302)
T cd05055 189 RDIMNDSN-------------------------YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNP 243 (302)
T ss_pred ccccCCCc-------------------------eeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCC
Confidence 54321100 001122346788999999988889999999999999999998 9999
Q ss_pred CCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChh
Q 001847 901 FRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 950 (1005)
Q Consensus 901 f~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~ 950 (1005)
|.+.......................+..+.+|+.+||..+|++||++.+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~e 293 (302)
T cd05055 244 YPGMPVDSKFYKLIKEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQ 293 (302)
T ss_pred cCCCCchHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHH
Confidence 98776655555555544444444456789999999999999999999443
No 259
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=3.2e-34 Score=313.65 Aligned_cols=248 Identities=23% Similarity=0.354 Sum_probs=203.9
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 001847 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 748 (1005)
Q Consensus 669 i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 748 (1005)
+..++|++.+.||+|+||.||++.+..+ ..+|+|.+..... ....+.+|+.+++.++||||+++++.+. ....|
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~----~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~ 76 (262)
T cd05071 3 IPRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIY 76 (262)
T ss_pred CChHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCcc----CHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcE
Confidence 4456899999999999999999998655 4599999875321 2356788999999999999999998875 45689
Q ss_pred EEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 001847 749 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 828 (1005)
Q Consensus 749 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~ 828 (1005)
+||||+.+++|.+++.......++...+..++.|++.||+|||++|++|+||||+||+++.++.++|+|||.+.......
T Consensus 77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~ 156 (262)
T cd05071 77 IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 156 (262)
T ss_pred EEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeeccccc
Confidence 99999999999999986544568999999999999999999999999999999999999999999999999885432110
Q ss_pred CCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChH
Q 001847 829 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 907 (1005)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~Pf~~~~~~ 907 (1005)
. .......++..|+|||++.+..++.++|||||||++|+|++ |..||.+....
T Consensus 157 ~--------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~ 210 (262)
T cd05071 157 Y--------------------------TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR 210 (262)
T ss_pred c--------------------------ccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH
Confidence 0 01112346778999999988889999999999999999999 89999887776
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCCh
Q 001847 908 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH 949 (1005)
Q Consensus 908 ~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~ 949 (1005)
.....+... ...+....++..+.+|+.+||..+|++||++.
T Consensus 211 ~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~ 251 (262)
T cd05071 211 EVLDQVERG-YRMPCPPECPESLHDLMCQCWRKEPEERPTFE 251 (262)
T ss_pred HHHHHHhcC-CCCCCccccCHHHHHHHHHHccCCcccCCCHH
Confidence 666655443 23333455788899999999999999999933
No 260
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=4.7e-34 Score=312.41 Aligned_cols=252 Identities=28% Similarity=0.405 Sum_probs=207.7
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
++|++.+.||+|++|.||+|.+..+|+.|++|.++............+.+|++++++++|+||+++++++...+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57999999999999999999998899999999987644444555678889999999999999999999999999999999
Q ss_pred eccCCCchhhHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 001847 752 DYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 829 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~ 829 (1005)
||+++++|..++... ....++...+..++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~- 160 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT- 160 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCCC-
Confidence 999999999998642 23458999999999999999999999999999999999999999999999999875432110
Q ss_pred CCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCh--H
Q 001847 830 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR--Q 907 (1005)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~--~ 907 (1005)
.......+++.|+|||.+.+..++.++|||||||++|+|++|+.||..... .
T Consensus 161 --------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~ 214 (267)
T cd08224 161 --------------------------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY 214 (267)
T ss_pred --------------------------cccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHH
Confidence 011234588899999999888889999999999999999999999965432 2
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChh
Q 001847 908 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 950 (1005)
Q Consensus 908 ~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~ 950 (1005)
.....+..+..........+..+.++|.+||..+|++||++.+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ 257 (267)
T cd08224 215 SLCKKIEKCDYPPLPADHYSEELRDLVSRCINPDPEKRPDISY 257 (267)
T ss_pred HHHhhhhcCCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHH
Confidence 3333333332221112246778999999999999999999433
No 261
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=3.3e-34 Score=317.08 Aligned_cols=256 Identities=22% Similarity=0.345 Sum_probs=208.1
Q ss_pred ccCCccccccccccCcEEEEEEEEc----CCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 001847 670 NLQHFRPIKPLGSGDTGSVHLVELC----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 745 (1005)
Q Consensus 670 ~~~~y~~~~~LG~G~~g~Vy~a~~~----~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 745 (1005)
..++|++.+.||+|+||.||++.+. .++..+++|.+... ........+.+|+.+++.++||||+++++++...+
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 80 (283)
T cd05090 3 PLSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDI--NNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQ 80 (283)
T ss_pred ChhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCC--CCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCC
Confidence 4568999999999999999999863 35678999998753 23344567888999999999999999999999999
Q ss_pred eEEEEEeccCCCchhhHHhhCC---------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecC
Q 001847 746 HVCLITDYCPGGELFLLLDRQP---------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN 810 (1005)
Q Consensus 746 ~~~lV~E~~~ggsL~~~l~~~~---------------~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~ 810 (1005)
..|+||||+++++|.+++.... ...+++..+..++.||+.||.|||++|++|+||||+|||++.+
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~ 160 (283)
T cd05090 81 PVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQ 160 (283)
T ss_pred ceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCC
Confidence 9999999999999999985321 1247888999999999999999999999999999999999999
Q ss_pred CcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHH
Q 001847 811 GHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGIL 890 (1005)
Q Consensus 811 g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvl 890 (1005)
+.+||+|||++........ ........++..|+|||++.+..++.++|||||||+
T Consensus 161 ~~~kl~dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i 215 (283)
T cd05090 161 LHVKISDLGLSREIYSADY-------------------------YRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVV 215 (283)
T ss_pred CcEEeccccccccccCCcc-------------------------eecccCCCccceecChHHhccCCCCchhhhHHHHHH
Confidence 9999999999854321110 011122345678999999988888999999999999
Q ss_pred HHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHc
Q 001847 891 LYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 957 (1005)
Q Consensus 891 l~eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 957 (1005)
+|+|++ |..||.+.........+... ...+....++..+.+++.+||+.+|.+||+ +.++++
T Consensus 216 l~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~----~~~i~~ 278 (283)
T cd05090 216 LWEIFSFGLQPYYGFSNQEVIEMVRKR-QLLPCSEDCPPRMYSLMTECWQEGPSRRPR----FKDIHT 278 (283)
T ss_pred HHHHHcCCCCCCCCCCHHHHHHHHHcC-CcCCCCCCCCHHHHHHHHHHcccCcccCcC----HHHHHH
Confidence 999998 99999887665555444433 333344457889999999999999999999 555554
No 262
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=6.4e-34 Score=311.49 Aligned_cols=259 Identities=25% Similarity=0.365 Sum_probs=213.8
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeeccc--ccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC--CeE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV--MLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--THV 747 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~--~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~--~~~ 747 (1005)
..|++.+.||+|+||.||++.+..+++.|++|.+.... .........+.+|+.++++++|+||+++++++... +.+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 36999999999999999999999999999999875431 12234556788999999999999999999998753 568
Q ss_pred EEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001847 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (1005)
Q Consensus 748 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 827 (1005)
+++|||+++++|.+++... ..+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++......
T Consensus 82 ~~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 159 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAY--GALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTI 159 (264)
T ss_pred EEEEEeCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECccccccccccc
Confidence 8999999999999998764 34889999999999999999999999999999999999999999999999988543210
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001847 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 907 (1005)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~ 907 (1005)
.. .........|+..|+|||.+.+..++.++|+|||||++|+|++|+.||......
T Consensus 160 ~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~ 215 (264)
T cd06653 160 CM------------------------SGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAM 215 (264)
T ss_pred cc------------------------cCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHH
Confidence 00 000112346889999999998888889999999999999999999999887666
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCC
Q 001847 908 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 961 (1005)
Q Consensus 908 ~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff 961 (1005)
....++.............+..+.++|.+||. +|..||+ +.+++.|||.
T Consensus 216 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~----~~~~~~~~~~ 264 (264)
T cd06653 216 AAIFKIATQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPT----AEFLLRHPFV 264 (264)
T ss_pred HHHHHHHcCCCCCCCCcccCHHHHHHHHHHhc-CcccCcc----HHHHhcCCCC
Confidence 66655554433322334577889999999999 5799999 9999999984
No 263
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=3.1e-34 Score=318.15 Aligned_cols=270 Identities=41% Similarity=0.736 Sum_probs=216.9
Q ss_pred CccccccccccCcEEEEEEEEc---CCCeEEEEEEeeccccc-ChHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeE
Q 001847 673 HFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVML-NRNKVHRACAEREILDML-DHPFVPALYASFQTKTHV 747 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~---~~~~~valK~~~~~~~~-~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~ 747 (1005)
.|++.+.||.|++|.||++.+. .++..||+|.+++.... .......+.+|+.++.++ +||||+.+++++......
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 4888999999999999999864 45788999998754322 223345677899999999 699999999999999999
Q ss_pred EEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001847 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (1005)
Q Consensus 748 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 827 (1005)
|+||||+.+++|.+++... ..+++..++.++.|++.+|.|||+.|++|+||+|+||+++.++.++|+|||++......
T Consensus 81 ~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 158 (288)
T cd05583 81 HLILDYVNGGELFTHLYQR--EHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAE 158 (288)
T ss_pred EEEEecCCCCcHHHHHhhc--CCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECccccccccc
Confidence 9999999999999998754 45889999999999999999999999999999999999999999999999987543211
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCC--CCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001847 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG--HTSAVDWWALGILLYEMLYGYTPFRGKT 905 (1005)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~--~~~~sDIwSlGvll~eLltG~~Pf~~~~ 905 (1005)
. ........|++.|+|||.+.+.. .+.++||||||+++|+|++|..||....
T Consensus 159 ~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~ 212 (288)
T cd05583 159 E--------------------------EERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDG 212 (288)
T ss_pred c--------------------------ccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCc
Confidence 0 00112346889999999987654 6789999999999999999999996432
Q ss_pred ----hHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCChhhhhhcC
Q 001847 906 ----RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMN 973 (1005)
Q Consensus 906 ----~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~~~~~~~~~ 973 (1005)
..+....+....... ...++..+.+||.+||+.+|++|||+.. +.++|+||||+.++|+.+...+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~R~t~~~-~~~~l~~~~~~~~~~~~~~~~~ 281 (288)
T cd05583 213 EQNSQSEISRRILKSKPPF--PKTMSAEARDFIQKLLEKDPKKRLGANG-ADEIKNHPFFQGIDWDDLAAKR 281 (288)
T ss_pred ccchHHHHHHHHHccCCCC--CcccCHHHHHHHHHHhcCCHhhccCcch-HHHHhcCcccccCCHHHHhhhc
Confidence 223333333333322 3346788999999999999999999543 7889999999999998774433
No 264
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=3.1e-34 Score=321.20 Aligned_cols=261 Identities=25% Similarity=0.360 Sum_probs=204.9
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC-----
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT----- 745 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~----- 745 (1005)
.++|++++.||+|+||.||+|.+..+++.||+|.+..... .........+|+.++++++||||+++++++....
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENE-KEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNR 89 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCC-cCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccC
Confidence 4589999999999999999999999999999998865422 1222334567999999999999999999886543
Q ss_pred ---eEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCc
Q 001847 746 ---HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 822 (1005)
Q Consensus 746 ---~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~ 822 (1005)
..|+||||+ +++|.+++.... ..+++..++.++.||+.||.|||++|++|+||||+||+++.++.+||+|||++.
T Consensus 90 ~~~~~~lv~e~~-~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~ 167 (310)
T cd07865 90 YKGSFYLVFEFC-EHDLAGLLSNKN-VKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLAR 167 (310)
T ss_pred CCceEEEEEcCC-CcCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCcc
Confidence 469999999 568888776542 358999999999999999999999999999999999999999999999999986
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCC
Q 001847 823 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPF 901 (1005)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlGvll~eLltG~~Pf 901 (1005)
........ .........++..|+|||.+.+. .++.++||||||+++|+|++|..||
T Consensus 168 ~~~~~~~~-----------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~ 224 (310)
T cd07865 168 AFSLSKNS-----------------------KPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIM 224 (310)
T ss_pred cccCCccc-----------------------CCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCC
Confidence 54321110 00112234678899999988664 3678999999999999999999999
Q ss_pred CCCChHHHHHHHHh--CCC-----------------CCCC-----------CCCCCHHHHHHHHHccccCcCccCCChhc
Q 001847 902 RGKTRQKTFANILH--KDL-----------------KFPS-----------STPTSLHAKQLMYRLLHRDPKSRLGSHEG 951 (1005)
Q Consensus 902 ~~~~~~~~~~~i~~--~~~-----------------~~~~-----------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~ 951 (1005)
.+.+.......+.. +.+ ..+. ....+..+.+||.+||..||.+||+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t---- 300 (310)
T cd07865 225 QGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRID---- 300 (310)
T ss_pred CCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccC----
Confidence 87765544333222 100 0000 0113456789999999999999999
Q ss_pred HHHHHcCCCC
Q 001847 952 ANEIKKHPFF 961 (1005)
Q Consensus 952 a~elL~hpff 961 (1005)
+.++|+||||
T Consensus 301 ~~e~l~h~~f 310 (310)
T cd07865 301 ADTALNHDFF 310 (310)
T ss_pred HHHHhcCCCC
Confidence 9999999998
No 265
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=2.8e-34 Score=313.41 Aligned_cols=252 Identities=24% Similarity=0.371 Sum_probs=208.2
Q ss_pred ccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001847 668 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 747 (1005)
Q Consensus 668 ~i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 747 (1005)
.+..++|++++.||+|+||.||+|.+ .+++.||+|.+..... ....+.+|+.+++.++|+||+++++++. .+..
T Consensus 2 ~~~~~~~~~~~~ig~G~~g~v~~~~~-~~~~~~a~K~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~ 75 (260)
T cd05067 2 EVPRETLKLVKKLGAGQFGEVWMGYY-NGHTKVAIKSLKQGSM----SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPI 75 (260)
T ss_pred ccchHHceeeeeeccCccceEEeeec-CCCceEEEEEecCCCC----cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCc
Confidence 35667999999999999999999987 4567899998875432 2357788999999999999999998874 4568
Q ss_pred EEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001847 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (1005)
Q Consensus 748 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 827 (1005)
|++|||+.+++|.+++.......++...+..++.|++.||+|||+.|++|+||||+||++++++.++|+|||++......
T Consensus 76 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05067 76 YIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDN 155 (260)
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCC
Confidence 99999999999999987665567899999999999999999999999999999999999999999999999988543211
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCh
Q 001847 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 906 (1005)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~Pf~~~~~ 906 (1005)
. ........++..|+|||++....++.++||||||+++|+|++ |+.||.+.+.
T Consensus 156 ~--------------------------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~ 209 (260)
T cd05067 156 E--------------------------YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTN 209 (260)
T ss_pred C--------------------------cccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCCh
Confidence 0 001112345678999999988888999999999999999998 9999988777
Q ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHH
Q 001847 907 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 956 (1005)
Q Consensus 907 ~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL 956 (1005)
......+... ...+.....+..+.+|+.+||..+|++||+ +++++
T Consensus 210 ~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~l~ 254 (260)
T cd05067 210 PEVIQNLERG-YRMPRPDNCPEELYELMRLCWKEKPEERPT----FEYLR 254 (260)
T ss_pred HHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHccCChhhCCC----HHHHH
Confidence 6665555433 333444456789999999999999999999 55554
No 266
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=1.9e-34 Score=326.50 Aligned_cols=260 Identities=25% Similarity=0.391 Sum_probs=214.8
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC-----eE
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT-----HV 747 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~-----~~ 747 (1005)
+|++.+.||.|++|.||+|.+..++..|++|.+.... ........+.+|+.+++.++|+||+++++++.... .+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVF-DDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDV 79 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeecccc-ccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccce
Confidence 5899999999999999999998889999999987642 23445567888999999999999999999988765 78
Q ss_pred EEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001847 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (1005)
Q Consensus 748 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 827 (1005)
|+||||+. ++|.+++... ..+++..++.++.||+.||+|||++||+|+||||+|||++.++.++|+|||++......
T Consensus 80 ~lv~e~~~-~~l~~~l~~~--~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~ 156 (330)
T cd07834 80 YIVTELME-TDLHKVIKSP--QPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPD 156 (330)
T ss_pred EEEecchh-hhHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeeccc
Confidence 99999995 6898888654 36999999999999999999999999999999999999999999999999998654321
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001847 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTR 906 (1005)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlGvll~eLltG~~Pf~~~~~ 906 (1005)
... ........+++.|+|||.+.+. .++.++|||||||++|+|++|..||.+.+.
T Consensus 157 ~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~ 212 (330)
T cd07834 157 EDE------------------------KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDY 212 (330)
T ss_pred ccc------------------------cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCH
Confidence 100 0112234678899999999887 788899999999999999999999988877
Q ss_pred HHHHHHHHhCCCCCC-----------------------------CCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHc
Q 001847 907 QKTFANILHKDLKFP-----------------------------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 957 (1005)
Q Consensus 907 ~~~~~~i~~~~~~~~-----------------------------~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 957 (1005)
.+.+..+.......+ .....+..+.+||.+||+++|.+||+ +.++++
T Consensus 213 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~~ll~ 288 (330)
T cd07834 213 IDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRIT----ADEALA 288 (330)
T ss_pred HHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCC----HHHHHh
Confidence 666555543211000 01225678899999999999999999 999999
Q ss_pred CCCCCCC
Q 001847 958 HPFFKGV 964 (1005)
Q Consensus 958 hpff~~~ 964 (1005)
||||+++
T Consensus 289 ~~~~~~~ 295 (330)
T cd07834 289 HPYLAQL 295 (330)
T ss_pred CccHHhh
Confidence 9999974
No 267
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=3.2e-34 Score=317.02 Aligned_cols=255 Identities=24% Similarity=0.421 Sum_probs=208.2
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 752 (1005)
+|++++.||.|++|.||++.+..+|..||+|.+..... ......+.+|+.++++++|+||+++++++...+..|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 78 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE--EGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFE 78 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccc--ccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEe
Confidence 48999999999999999999999999999999876432 2233556789999999999999999999999999999999
Q ss_pred ccCCCchhhHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001847 753 YCPGGELFLLLDRQP-TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (1005)
Q Consensus 753 ~~~ggsL~~~l~~~~-~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 831 (1005)
|+. ++|.+++.... ...+++..+..++.||+.||.|||+.|++|+||||+||++++++.++|+|||++.......
T Consensus 79 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~--- 154 (284)
T cd07836 79 YMD-KDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV--- 154 (284)
T ss_pred cCC-ccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc---
Confidence 996 58888876532 2458999999999999999999999999999999999999999999999999885432110
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001847 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 910 (1005)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~ 910 (1005)
.......+++.|++||++.+. .++.++|||||||++|+|++|..||.+.+..+..
T Consensus 155 ------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~ 210 (284)
T cd07836 155 ------------------------NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQL 210 (284)
T ss_pred ------------------------cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHH
Confidence 111233578899999998664 4678999999999999999999999887766555
Q ss_pred HHHHhCC------------------CCCCC---------CCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCC
Q 001847 911 ANILHKD------------------LKFPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 961 (1005)
Q Consensus 911 ~~i~~~~------------------~~~~~---------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff 961 (1005)
..+.... ...+. ....+..+.++|.+||+.||.+||+ +.++++||||
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~----~~~~l~~~~f 284 (284)
T cd07836 211 LKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRIS----AHDALQHPWF 284 (284)
T ss_pred HHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCC----HHHHhcCCCC
Confidence 5443210 00000 0124667889999999999999999 9999999998
No 268
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=3.8e-34 Score=309.97 Aligned_cols=250 Identities=48% Similarity=0.864 Sum_probs=215.8
Q ss_pred ccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCCch
Q 001847 680 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 759 (1005)
Q Consensus 680 LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ggsL 759 (1005)
||.|+||.||++.+..+++.+++|.+.............+..|+.+++.++|+||+++++.+..++.+|+||||+.+++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 69999999999999888999999999876555555677888999999999999999999999999999999999999999
Q ss_pred hhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhh
Q 001847 760 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 839 (1005)
Q Consensus 760 ~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~ 839 (1005)
.+++... ..+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~----------- 147 (250)
T cd05123 81 FSHLSKE--GRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG----------- 147 (250)
T ss_pred HHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCC-----------
Confidence 9999765 358999999999999999999999999999999999999999999999999885432110
Q ss_pred hcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCC
Q 001847 840 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLK 919 (1005)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~~i~~~~~~ 919 (1005)
.......++..|++||.+.+...+.++|+||||+++|+|++|..||...........+......
T Consensus 148 ----------------~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 211 (250)
T cd05123 148 ----------------SRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLR 211 (250)
T ss_pred ----------------CcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCC
Confidence 1123456888999999998888889999999999999999999999887776666666664444
Q ss_pred CCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCC
Q 001847 920 FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 961 (1005)
Q Consensus 920 ~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff 961 (1005)
++. ..+..+.+||.+||..||++||+... +.++++||||
T Consensus 212 ~~~--~~~~~l~~~i~~~l~~~p~~R~~~~~-~~~l~~~~~f 250 (250)
T cd05123 212 FPE--FLSPEARDLISGLLQKDPTKRLGSGG-AEEIKAHPFF 250 (250)
T ss_pred CCC--CCCHHHHHHHHHHhcCCHhhCCCccc-HHHHHhCCCC
Confidence 433 35788999999999999999999433 4999999998
No 269
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=1.3e-34 Score=328.67 Aligned_cols=266 Identities=26% Similarity=0.407 Sum_probs=211.8
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEe----CCeE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT----KTHV 747 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~----~~~~ 747 (1005)
++|++.+.||.|++|.||++.+..++..||+|.+..... .......+.+|+.+++.++||||++++++|.. ...+
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFD-VPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccc-cccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 589999999999999999999999999999999875422 23345667789999999999999999998763 3578
Q ss_pred EEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001847 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (1005)
Q Consensus 748 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 827 (1005)
|+||||+ +++|.+++... ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++......
T Consensus 84 ~lv~e~~-~~~l~~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 160 (334)
T cd07855 84 YVVMDLM-ESDLHHIIHSD--QPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSS 160 (334)
T ss_pred EEEEehh-hhhHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeeccc
Confidence 9999999 56898888654 44899999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001847 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTR 906 (1005)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~ 906 (1005)
... .........|+..|+|||.+.. ..++.++|||||||++|+|++|+.||.+.+.
T Consensus 161 ~~~-----------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~ 217 (334)
T cd07855 161 PTE-----------------------HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNY 217 (334)
T ss_pred CcC-----------------------CCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCCh
Confidence 100 0011123468899999999865 4578899999999999999999999987665
Q ss_pred HHHHHHHHhC----------------------CCCCCC-------CCCCCHHHHHHHHHccccCcCccCCChhcHHHHHc
Q 001847 907 QKTFANILHK----------------------DLKFPS-------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 957 (1005)
Q Consensus 907 ~~~~~~i~~~----------------------~~~~~~-------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 957 (1005)
...+..+... ...... ....+..+.+||.+||+.+|.+||+ +.+++.
T Consensus 218 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~~~l~ 293 (334)
T cd07855 218 VHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERIT----VEQALQ 293 (334)
T ss_pred HHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcC----HHHHHh
Confidence 4433322211 000000 1235778999999999999999999 999999
Q ss_pred CCCCCCCChhh
Q 001847 958 HPFFKGVNWAL 968 (1005)
Q Consensus 958 hpff~~~~~~~ 968 (1005)
||||++.....
T Consensus 294 ~~~~~~~~~~~ 304 (334)
T cd07855 294 HPFLAQYHDPD 304 (334)
T ss_pred ChhhhhccCCc
Confidence 99999754433
No 270
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=6.4e-34 Score=312.08 Aligned_cols=254 Identities=26% Similarity=0.383 Sum_probs=203.5
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 752 (1005)
.+.....||+|+||.||++.+..++..|++|.+... .......+.+|+.+++.++|+||+++++++..++.+++|||
T Consensus 9 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 85 (268)
T cd06624 9 ENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPER---DSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFME 85 (268)
T ss_pred cCCceEEEecCCceEEEEeEecCCCcEEEEEEecCC---CHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEe
Confidence 344446799999999999999889999999988654 23455678899999999999999999999999999999999
Q ss_pred ccCCCchhhHHhhCCCCCC--CHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEec-CCcEEEEeccCCcccCCCCC
Q 001847 753 YCPGGELFLLLDRQPTKVL--KEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLSCLTSCKPQ 829 (1005)
Q Consensus 753 ~~~ggsL~~~l~~~~~~~l--~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~-~g~vkL~DFG~a~~~~~~~~ 829 (1005)
|+.+++|.+++.... ..+ +...+..++.||+.||+|||++||+|+||||+||+++. ++.++|+|||++.......
T Consensus 86 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~- 163 (268)
T cd06624 86 QVPGGSLSALLRSKW-GPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGIN- 163 (268)
T ss_pred cCCCCCHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccCC-
Confidence 999999999987542 234 78889999999999999999999999999999999986 6799999999875432100
Q ss_pred CCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCC--CCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001847 830 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG--HTSAVDWWALGILLYEMLYGYTPFRGKTRQ 907 (1005)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~--~~~~sDIwSlGvll~eLltG~~Pf~~~~~~ 907 (1005)
.......|++.|+|||++.... ++.++||||||+++|+|++|..||......
T Consensus 164 --------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~ 217 (268)
T cd06624 164 --------------------------PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEP 217 (268)
T ss_pred --------------------------CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccCh
Confidence 0111235788999999986643 678999999999999999999999764432
Q ss_pred HH-HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCC
Q 001847 908 KT-FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 961 (1005)
Q Consensus 908 ~~-~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff 961 (1005)
.. .................+.++.+|+.+||..+|.+||+ +.+++.||||
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~ll~~~~~ 268 (268)
T cd06624 218 QAAMFKVGMFKIHPEIPESLSAEAKNFILRCFEPDPDKRAS----AHDLLQDPFL 268 (268)
T ss_pred hhhHhhhhhhccCCCCCcccCHHHHHHHHHHcCCCchhCCC----HHHHHhCCCC
Confidence 21 11111111111122346788999999999999999999 9999999997
No 271
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=2.6e-34 Score=325.22 Aligned_cols=262 Identities=23% Similarity=0.320 Sum_probs=206.0
Q ss_pred cccccc--CcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccC
Q 001847 678 KPLGSG--DTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCP 755 (1005)
Q Consensus 678 ~~LG~G--~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ 755 (1005)
..||.| +||+||++.+..+|+.||+|++..... .....+.+.+|+.+++.++||||++++++|...+..|+||||+.
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~ 82 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENC-TEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMA 82 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEeccc
Confidence 456666 999999999999999999999875432 23445778889999999999999999999999999999999999
Q ss_pred CCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcc
Q 001847 756 GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT 835 (1005)
Q Consensus 756 ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~ 835 (1005)
+++|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++.++.++++||+.+.........
T Consensus 83 ~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~----- 157 (328)
T cd08226 83 YGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQK----- 157 (328)
T ss_pred CCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcc-----
Confidence 999999988654456899999999999999999999999999999999999999999999999865322110000
Q ss_pred hhhhhcccCCCCCcccccccccccccccCCcccccccccCC--CCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHH
Q 001847 836 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA--GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI 913 (1005)
Q Consensus 836 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~--~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~~i 913 (1005)
... .........++..|+|||++.+. .++.++|||||||++|+|++|..||.+..........
T Consensus 158 -----------~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~ 222 (328)
T cd08226 158 -----------AKV----VYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQK 222 (328)
T ss_pred -----------ccc----cccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHH
Confidence 000 00001112356679999998764 4678999999999999999999999877655544443
Q ss_pred HhCCCC---------------------------------------------CCCCCCCCHHHHHHHHHccccCcCccCCC
Q 001847 914 LHKDLK---------------------------------------------FPSSTPTSLHAKQLMYRLLHRDPKSRLGS 948 (1005)
Q Consensus 914 ~~~~~~---------------------------------------------~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~ 948 (1005)
+..... .+.....+..+.+||.+||+.||++|||
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt- 301 (328)
T cd08226 223 LKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPS- 301 (328)
T ss_pred hcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCC-
Confidence 332111 1111224567899999999999999999
Q ss_pred hhcHHHHHcCCCCCCC
Q 001847 949 HEGANEIKKHPFFKGV 964 (1005)
Q Consensus 949 ~~~a~elL~hpff~~~ 964 (1005)
+.++|+||||+.+
T Consensus 302 ---a~e~l~~~~~~~~ 314 (328)
T cd08226 302 ---ASSLLSHAFFKQV 314 (328)
T ss_pred ---HHHHhhCHHHHHH
Confidence 9999999999864
No 272
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=3.1e-34 Score=312.61 Aligned_cols=251 Identities=22% Similarity=0.330 Sum_probs=207.8
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 750 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 750 (1005)
..+|++.+.||+|+||.||++.+.. +..+|+|.+..... ....+.+|+.++++++||||+++++++.....+|+|
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 77 (256)
T cd05113 3 PKDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSM----SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIV 77 (256)
T ss_pred hHHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcc----cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEE
Confidence 4579999999999999999998743 45699998875422 235678899999999999999999999998999999
Q ss_pred EeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001847 751 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (1005)
Q Consensus 751 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 830 (1005)
|||+.+++|.+++.... ..+++..+..++.||+.||.|||+.|++|+||||+||+++.++.+||+|||.+.......
T Consensus 78 ~e~~~~~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~-- 154 (256)
T cd05113 78 TEYMSNGCLLNYLREHG-KRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDE-- 154 (256)
T ss_pred EEcCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCc--
Confidence 99999999999987643 258999999999999999999999999999999999999999999999999875432110
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHHH
Q 001847 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKT 909 (1005)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~Pf~~~~~~~~ 909 (1005)
........++..|+|||.+.+..++.++|||||||++|+|++ |..||........
T Consensus 155 ------------------------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~ 210 (256)
T cd05113 155 ------------------------YTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSET 210 (256)
T ss_pred ------------------------eeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHH
Confidence 001112235678999999988888999999999999999998 9999988777766
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcC
Q 001847 910 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 958 (1005)
Q Consensus 910 ~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~h 958 (1005)
...+...... ......+..+.+++.+||..+|.+||+ +.+|+.+
T Consensus 211 ~~~~~~~~~~-~~~~~~~~~~~~li~~cl~~~p~~Rp~----~~~ll~~ 254 (256)
T cd05113 211 VEKVSQGLRL-YRPHLASEKVYAIMYSCWHEKAEERPT----FQQLLSS 254 (256)
T ss_pred HHHHhcCCCC-CCCCCCCHHHHHHHHHHcCCCcccCCC----HHHHHHh
Confidence 6666655333 223346788999999999999999999 7777754
No 273
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=4.6e-34 Score=315.04 Aligned_cols=257 Identities=20% Similarity=0.298 Sum_probs=209.1
Q ss_pred ccCCccccccccccCcEEEEEEEEcC-----CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 001847 670 NLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 744 (1005)
Q Consensus 670 ~~~~y~~~~~LG~G~~g~Vy~a~~~~-----~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 744 (1005)
..+.|.+.+.||+|++|.||+|.+.. ++..|++|.+... ........+.+|+.+++.++|+||+++++++...
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~--~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 81 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPES--CSEQDESDFLMEALIMSKFNHQNIVRLIGVSFER 81 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCC--CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccC
Confidence 34679999999999999999999977 7789999987643 2233445688899999999999999999999988
Q ss_pred CeEEEEEeccCCCchhhHHhhCCC-----CCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCC---cEEEE
Q 001847 745 THVCLITDYCPGGELFLLLDRQPT-----KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG---HVSLT 816 (1005)
Q Consensus 745 ~~~~lV~E~~~ggsL~~~l~~~~~-----~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g---~vkL~ 816 (1005)
+..|+||||+.+++|.+++..... ..+++..+..++.||+.||.|||++|++|+||||+||+++.++ .+||+
T Consensus 82 ~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~ 161 (277)
T cd05036 82 LPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIA 161 (277)
T ss_pred CCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEec
Confidence 899999999999999999875421 2588999999999999999999999999999999999998765 59999
Q ss_pred eccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc
Q 001847 817 DFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY 896 (1005)
Q Consensus 817 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt 896 (1005)
|||++........ ........++..|+|||++.+..++.++|||||||++|+|++
T Consensus 162 dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~ 216 (277)
T cd05036 162 DFGMARDIYRASY-------------------------YRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFS 216 (277)
T ss_pred cCccccccCCccc-------------------------eecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHc
Confidence 9999865421100 000112234568999999988889999999999999999996
Q ss_pred -CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcC
Q 001847 897 -GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 958 (1005)
Q Consensus 897 -G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~h 958 (1005)
|..||.+.+.......+... ........++..+.+|+.+||+.+|++||+ +.++++|
T Consensus 217 ~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps----~~~vl~~ 274 (277)
T cd05036 217 LGYMPYPGRTNQEVMEFVTGG-GRLDPPKGCPGPVYRIMTDCWQHTPEDRPN----FATILER 274 (277)
T ss_pred CCCCCCCCCCHHHHHHHHHcC-CcCCCCCCCCHHHHHHHHHHcCCCcccCcC----HHHHHHH
Confidence 99999987776665554433 222333456788999999999999999999 7777765
No 274
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=2.9e-34 Score=321.17 Aligned_cols=255 Identities=22% Similarity=0.327 Sum_probs=205.8
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeE--EEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCC
Q 001847 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQY--FAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKT 745 (1005)
Q Consensus 669 i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~--valK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~ 745 (1005)
+..++|++.+.||+|+||.||+|.+..++.. +++|.+... ........+.+|+.++.++ +|+||+++++++...+
T Consensus 4 ~~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~ 81 (303)
T cd05088 4 LEWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG 81 (303)
T ss_pred cchhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEeccc--CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCC
Confidence 4456899999999999999999999777754 577766532 2334556778899999999 8999999999999999
Q ss_pred eEEEEEeccCCCchhhHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCC
Q 001847 746 HVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG 811 (1005)
Q Consensus 746 ~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g 811 (1005)
.+|+||||+++++|.+++.... ...++...++.++.||+.||+|||++||+||||||+|||++.++
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~ 161 (303)
T cd05088 82 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENY 161 (303)
T ss_pred CceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCC
Confidence 9999999999999999987532 13578999999999999999999999999999999999999999
Q ss_pred cEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHH
Q 001847 812 HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILL 891 (1005)
Q Consensus 812 ~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll 891 (1005)
.+||+|||++...... .......++..|+|||++.+..++.++|||||||++
T Consensus 162 ~~kl~dfg~~~~~~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 213 (303)
T cd05088 162 VAKIADFGLSRGQEVY----------------------------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLL 213 (303)
T ss_pred cEEeCccccCcccchh----------------------------hhcccCCCcccccCHHHHhccCCcccccchhhhhHH
Confidence 9999999987421100 001112345679999999888889999999999999
Q ss_pred HHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcC
Q 001847 892 YEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 958 (1005)
Q Consensus 892 ~eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~h 958 (1005)
|+|++ |..||.+.+..+....+... .........+..+.+|+.+||+.+|++||+ +.+++++
T Consensus 214 ~ellt~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~il~~ 276 (303)
T cd05088 214 WEIVSLGGTPYCGMTCAELYEKLPQG-YRLEKPLNCDDEVYDLMRQCWREKPYERPS----FAQILVS 276 (303)
T ss_pred HHHHhcCCCCcccCChHHHHHHHhcC-CcCCCCCCCCHHHHHHHHHHcCCChhhCcC----HHHHHHH
Confidence 99998 99999887766665555332 222233346788999999999999999999 5555544
No 275
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=3.2e-34 Score=318.84 Aligned_cols=261 Identities=21% Similarity=0.340 Sum_probs=212.5
Q ss_pred cccccccCCccccccccccCcEEEEEEEEcCC-----CeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceEE
Q 001847 665 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGS-----GQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALY 738 (1005)
Q Consensus 665 ~~~~i~~~~y~~~~~LG~G~~g~Vy~a~~~~~-----~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~ 738 (1005)
+...+..++|++.+.||+|+||.||++.+... ...+|+|.+.... .......+.+|+.+++++ +|+||++++
T Consensus 5 ~~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~ 82 (293)
T cd05053 5 PEWELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLL 82 (293)
T ss_pred cccccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC--CHHHHHHHHHHHHHHHhhcCCCCeeeEE
Confidence 44556778999999999999999999998644 3789999987542 233446688899999999 899999999
Q ss_pred EEEEeCCeEEEEEeccCCCchhhHHhhC--------------CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCc
Q 001847 739 ASFQTKTHVCLITDYCPGGELFLLLDRQ--------------PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 804 (1005)
Q Consensus 739 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~--------------~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~N 804 (1005)
+++...+.+|++|||+.+++|..++... ....++...+..++.||+.||.|||++||+|+||||+|
T Consensus 83 ~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~N 162 (293)
T cd05053 83 GVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARN 162 (293)
T ss_pred EEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceee
Confidence 9999999999999999999999998642 23568999999999999999999999999999999999
Q ss_pred EEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhH
Q 001847 805 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 884 (1005)
Q Consensus 805 ILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDI 884 (1005)
|+++.++.+||+|||++........ ........++..|+|||++.+..++.++||
T Consensus 163 il~~~~~~~kL~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di 217 (293)
T cd05053 163 VLVTEDHVMKIADFGLARDIHHIDY-------------------------YRKTTNGRLPVKWMAPEALFDRVYTHQSDV 217 (293)
T ss_pred EEEcCCCeEEeCccccccccccccc-------------------------eeccCCCCCCccccCHHHhccCCcCcccce
Confidence 9999999999999999854321100 001111234678999999988889999999
Q ss_pred HHHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHc
Q 001847 885 WALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 957 (1005)
Q Consensus 885 wSlGvll~eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 957 (1005)
|||||++|+|++ |..||.+....+....+... .........+..+.+|+.+||..+|++||| +.++++
T Consensus 218 ~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~eil~ 286 (293)
T cd05053 218 WSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEG-YRMEKPQNCTQELYHLMRDCWHEVPSQRPT----FKQLVE 286 (293)
T ss_pred eehhhHHHHHhcCCCCCCCCCCHHHHHHHHHcC-CcCCCCCCCCHHHHHHHHHHcccCcccCcC----HHHHHH
Confidence 999999999997 99999887766666555444 233333456788999999999999999999 666654
No 276
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=4.8e-34 Score=317.60 Aligned_cols=255 Identities=30% Similarity=0.471 Sum_probs=213.5
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 752 (1005)
.|.....||+|+||.||++.+..++..+|+|.+... .......+.+|+.+++.++|+||+++++++...++.|+|||
T Consensus 21 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 97 (292)
T cd06657 21 YLDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLR---KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVME 97 (292)
T ss_pred HhhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEeccc---chhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEe
Confidence 344457799999999999999999999999987533 23345678889999999999999999999999999999999
Q ss_pred ccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001847 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (1005)
Q Consensus 753 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 832 (1005)
|+++++|.+++.. ..+++..+..++.|++.+|+|||+.|++|+||+|+||+++.++.++|+|||++......
T Consensus 98 ~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~----- 169 (292)
T cd06657 98 FLEGGALTDIVTH---TRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE----- 169 (292)
T ss_pred cCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceecccc-----
Confidence 9999999998754 34899999999999999999999999999999999999999999999999987433211
Q ss_pred CcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001847 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 912 (1005)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~~ 912 (1005)
........|++.|+|||.+....++.++|+||||+++|+|++|..||.+.........
T Consensus 170 ----------------------~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~ 227 (292)
T cd06657 170 ----------------------VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKM 227 (292)
T ss_pred ----------------------cccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 0112235688999999999888888999999999999999999999988766555544
Q ss_pred HHhCC-CCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCC
Q 001847 913 ILHKD-LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 964 (1005)
Q Consensus 913 i~~~~-~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~ 964 (1005)
+.... ..+......+..+.+++.+||..+|.+||+ +.++++||||...
T Consensus 228 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~----~~~ll~~~~~~~~ 276 (292)
T cd06657 228 IRDNLPPKLKNLHKVSPSLKGFLDRLLVRDPAQRAT----AAELLKHPFLAKA 276 (292)
T ss_pred HHhhCCcccCCcccCCHHHHHHHHHHHhCCcccCcC----HHHHhcChHHhcc
Confidence 43321 122233446788999999999999999999 9999999999975
No 277
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=8.3e-34 Score=307.85 Aligned_cols=257 Identities=30% Similarity=0.437 Sum_probs=215.4
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC--CeEEEE
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--THVCLI 750 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~--~~~~lV 750 (1005)
+|++.+.||+|++|.||++.+..+++.+++|.+..... .......+.+|+.++++++|+||+++++.+... ..+++|
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 79 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGD-SEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIF 79 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeecccc-chHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEE
Confidence 48888999999999999999988999999999876532 245567888999999999999999999999988 899999
Q ss_pred EeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001847 751 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (1005)
Q Consensus 751 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 830 (1005)
|||+.+++|.+++.... .+++..+..++.|++.+|.|||+.|++|+||+|+||+++.++.++|+|||.+.........
T Consensus 80 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 157 (260)
T cd06606 80 LEYVSGGSLSSLLKKFG--KLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETG 157 (260)
T ss_pred EEecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEeccccccc
Confidence 99999999999998653 6899999999999999999999999999999999999999999999999988554321100
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC-hHHH
Q 001847 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT-RQKT 909 (1005)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~-~~~~ 909 (1005)
.......++..|+|||.+.....+.++||||||+++|+|++|..||.... ....
T Consensus 158 -------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~ 212 (260)
T cd06606 158 -------------------------EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAA 212 (260)
T ss_pred -------------------------ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHH
Confidence 01223468889999999988888999999999999999999999998765 2333
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCC
Q 001847 910 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 961 (1005)
Q Consensus 910 ~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff 961 (1005)
...+.............+..+.+||.+||..+|++||+ +.++++||||
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~----~~~ll~~~~~ 260 (260)
T cd06606 213 LYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPT----ADELLQHPFL 260 (260)
T ss_pred HHhccccCCCcCCCcccCHHHHHHHHHhCcCChhhCCC----HHHHhhCCCC
Confidence 33333222222223345789999999999999999999 9999999997
No 278
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=4.6e-34 Score=310.98 Aligned_cols=247 Identities=22% Similarity=0.382 Sum_probs=205.0
Q ss_pred ccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEE-eCCe
Q 001847 668 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ-TKTH 746 (1005)
Q Consensus 668 ~i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~ 746 (1005)
.++..+|++.+.||+|+||.||++.. .+..+++|.++.. .....+.+|+.++++++|+|++++++++. ..+.
T Consensus 2 ~~~~~~~~~~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 74 (256)
T cd05082 2 ALNMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKND-----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGG 74 (256)
T ss_pred CccHHhCeeeeeecccCCCeEEEEEE--cCCcEEEEEeCCC-----chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCc
Confidence 46778999999999999999999987 4778999988643 23456788999999999999999998754 5567
Q ss_pred EEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 001847 747 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 826 (1005)
Q Consensus 747 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~ 826 (1005)
.|+||||+++++|.+++.......+++..+..++.||+.||+|||++|++|+||||+||+++.++.+||+|||++.....
T Consensus 75 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 154 (256)
T cd05082 75 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 154 (256)
T ss_pred eEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceeccc
Confidence 89999999999999999876555688999999999999999999999999999999999999999999999998743211
Q ss_pred CCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCC
Q 001847 827 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKT 905 (1005)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~Pf~~~~ 905 (1005)
. .....++..|+|||++.+..++.++|||||||++|+|++ |+.||....
T Consensus 155 ~------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~ 204 (256)
T cd05082 155 T------------------------------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP 204 (256)
T ss_pred c------------------------------CCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCC
Confidence 0 112234568999999988888999999999999999997 999998776
Q ss_pred hHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHH
Q 001847 906 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 956 (1005)
Q Consensus 906 ~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL 956 (1005)
.......+... ........++..+.+|+.+||+.+|++||+ +.+++
T Consensus 205 ~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~l~ 250 (256)
T cd05082 205 LKDVVPRVEKG-YKMDAPDGCPPVVYDVMKQCWHLDAATRPS----FLQLR 250 (256)
T ss_pred HHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHhcCChhhCcC----HHHHH
Confidence 66655555443 222333457889999999999999999999 55554
No 279
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=4e-34 Score=316.37 Aligned_cols=257 Identities=21% Similarity=0.325 Sum_probs=210.4
Q ss_pred cccCCccccccccccCcEEEEEEEEcCC-----CeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 001847 669 INLQHFRPIKPLGSGDTGSVHLVELCGS-----GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 743 (1005)
Q Consensus 669 i~~~~y~~~~~LG~G~~g~Vy~a~~~~~-----~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 743 (1005)
++..+|++++.||.|+||.||++.+..+ ++.+|+|.++... .......+..|+.++..++||||+++++++..
T Consensus 2 i~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~ 79 (283)
T cd05091 2 INLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA--EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTK 79 (283)
T ss_pred CCHHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC--CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC
Confidence 3456899999999999999999997543 5789999987542 23344667889999999999999999999999
Q ss_pred CCeEEEEEeccCCCchhhHHhhC--------------CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEec
Q 001847 744 KTHVCLITDYCPGGELFLLLDRQ--------------PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG 809 (1005)
Q Consensus 744 ~~~~~lV~E~~~ggsL~~~l~~~--------------~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~ 809 (1005)
....++++||+.+++|.+++... ....++...+..++.|++.||.|||++||+||||||+||++++
T Consensus 80 ~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~ 159 (283)
T cd05091 80 EQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFD 159 (283)
T ss_pred CCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecC
Confidence 99999999999999999998531 1234788889999999999999999999999999999999999
Q ss_pred CCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHH
Q 001847 810 NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGI 889 (1005)
Q Consensus 810 ~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGv 889 (1005)
++.+||+|||++........ ........+++.|+|||.+....++.++|||||||
T Consensus 160 ~~~~kl~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~ 214 (283)
T cd05091 160 KLNVKISDLGLFREVYAADY-------------------------YKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGV 214 (283)
T ss_pred CCceEecccccccccccchh-------------------------eeeccCccCCccccCHHHHhcCCCCcchhHHHHHH
Confidence 99999999998854321100 01112334678999999998888899999999999
Q ss_pred HHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHc
Q 001847 890 LLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 957 (1005)
Q Consensus 890 ll~eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 957 (1005)
++|+|++ |..||.+....+....+...... +....++..+.+|+.+||+.+|.+||+ +++++.
T Consensus 215 ~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~li~~cl~~~p~~RP~----~~~i~~ 278 (283)
T cd05091 215 VLWEVFSYGLQPYCGYSNQDVIEMIRNRQVL-PCPDDCPAWVYTLMLECWNEFPSRRPR----FKDIHS 278 (283)
T ss_pred HHHHHHcCCCCCCCCCCHHHHHHHHHcCCcC-CCCCCCCHHHHHHHHHHhCCCcccCCC----HHHHHH
Confidence 9999998 88999888877777776665432 223357888999999999999999999 666654
No 280
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=8.5e-34 Score=308.02 Aligned_cols=246 Identities=22% Similarity=0.326 Sum_probs=200.7
Q ss_pred ccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCC
Q 001847 678 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGG 757 (1005)
Q Consensus 678 ~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~gg 757 (1005)
+.||+|+||.||++.+..+++.+|+|.+.... .......+.+|+++++.++||||+++++++......|+||||+.++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 78 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETL--PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 78 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCC
Confidence 46899999999999999999999999876432 3444567889999999999999999999999999999999999999
Q ss_pred chhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchh
Q 001847 758 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 837 (1005)
Q Consensus 758 sL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~ 837 (1005)
+|.+++... ...+++..++.++.|++.||.|||++||+|+||||+|||++.++.+||+|||++.........
T Consensus 79 ~L~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~------- 150 (252)
T cd05084 79 DFLTFLRTE-GPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYA------- 150 (252)
T ss_pred cHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCccccccccc-------
Confidence 999998654 245899999999999999999999999999999999999999999999999988543210000
Q ss_pred hhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHHHHHHHHhC
Q 001847 838 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILHK 916 (1005)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~Pf~~~~~~~~~~~i~~~ 916 (1005)
.......++..|+|||.+.+..++.++|||||||++|+|++ |..||...........+...
T Consensus 151 ------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~ 212 (252)
T cd05084 151 ------------------STGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQG 212 (252)
T ss_pred ------------------ccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcC
Confidence 00011123457999999988888999999999999999997 99999776665554444432
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHH
Q 001847 917 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 956 (1005)
Q Consensus 917 ~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL 956 (1005)
...+.....+..+.+|+.+||..+|++||+ +.+++
T Consensus 213 -~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~~~ 247 (252)
T cd05084 213 -VRLPCPELCPDAVYRLMERCWEYDPGQRPS----FSTVH 247 (252)
T ss_pred -CCCCCcccCCHHHHHHHHHHcCCChhhCcC----HHHHH
Confidence 233334456889999999999999999999 55554
No 281
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=4.6e-34 Score=311.15 Aligned_cols=250 Identities=23% Similarity=0.374 Sum_probs=206.0
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 750 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 750 (1005)
..+|++.+.||+|+||.||++.+. ++..+|+|.+..... ....+.+|+.+++.++||||+++++++...+..|+|
T Consensus 3 ~~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 77 (256)
T cd05059 3 PSELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAM----SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIV 77 (256)
T ss_pred hHHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCC----CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEE
Confidence 357999999999999999999885 466899998865422 234577899999999999999999999999999999
Q ss_pred EeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001847 751 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (1005)
Q Consensus 751 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 830 (1005)
|||+++++|.+++.... ..+++..+..++.||+.||+|||++|++|+||||+||+++.++.+||+|||++........
T Consensus 78 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~- 155 (256)
T cd05059 78 TEYMANGCLLNYLRERK-GKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY- 155 (256)
T ss_pred EecCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceecccccc-
Confidence 99999999999987643 3589999999999999999999999999999999999999999999999998854321100
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHHH
Q 001847 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKT 909 (1005)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~Pf~~~~~~~~ 909 (1005)
.......++..|+|||.+.+..++.++||||||+++|+|++ |..||......+.
T Consensus 156 -------------------------~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~ 210 (256)
T cd05059 156 -------------------------TSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEV 210 (256)
T ss_pred -------------------------cccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHH
Confidence 00111124567999999988889999999999999999998 8999988777666
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHc
Q 001847 910 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 957 (1005)
Q Consensus 910 ~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 957 (1005)
...+... ...+.....+..+.+++.+||..+|++||+ +.++++
T Consensus 211 ~~~~~~~-~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt----~~~~l~ 253 (256)
T cd05059 211 VESVSAG-YRLYRPKLAPTEVYTIMYSCWHEKPEDRPA----FKKLLS 253 (256)
T ss_pred HHHHHcC-CcCCCCCCCCHHHHHHHHHHhcCChhhCcC----HHHHHH
Confidence 6655443 333333457889999999999999999999 666664
No 282
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=7.6e-34 Score=311.16 Aligned_cols=254 Identities=22% Similarity=0.284 Sum_probs=209.4
Q ss_pred cCCccccccccccCcEEEEEEEEcCC---CeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 747 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~---~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 747 (1005)
.++|++.+.||+|+||.||+|.+..+ ...+|+|.++... .......+.+|+.+++.++||||+++++++...+..
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 80 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS--SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPV 80 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC--ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCce
Confidence 45799999999999999999998644 4579999887542 334456778899999999999999999999999999
Q ss_pred EEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001847 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (1005)
Q Consensus 748 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 827 (1005)
|+||||+++++|.+++.... +.++...+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 81 ~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~ 159 (266)
T cd05033 81 MIITEYMENGSLDKFLREND-GKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDS 159 (266)
T ss_pred EEEEEcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhccccc
Confidence 99999999999999987643 36899999999999999999999999999999999999999999999999998654311
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCh
Q 001847 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 906 (1005)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~Pf~~~~~ 906 (1005)
... .......+++.|+|||.+....++.++||||||+++|+|++ |..||.....
T Consensus 160 ~~~-------------------------~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~ 214 (266)
T cd05033 160 EAT-------------------------YTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSN 214 (266)
T ss_pred ccc-------------------------eeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCH
Confidence 100 00111235678999999988889999999999999999997 9999988777
Q ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHc
Q 001847 907 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 957 (1005)
Q Consensus 907 ~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 957 (1005)
......+... ...+.....+..+.+|+.+||+.+|++||+ +.++++
T Consensus 215 ~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~----~~ei~~ 260 (266)
T cd05033 215 QDVIKAVEDG-YRLPPPMDCPSALYQLMLDCWQKDRNERPT----FSQIVS 260 (266)
T ss_pred HHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHcCCCcccCcC----HHHHHH
Confidence 6666666543 233334457889999999999999999999 555554
No 283
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=6.8e-34 Score=318.91 Aligned_cols=256 Identities=25% Similarity=0.367 Sum_probs=216.2
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
..|...+.||.|+||.||++.+..++..+++|.+.............+.+|+.+++.++|+|++++++++...+..|+||
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 46888999999999999999999999999999987543334445567888999999999999999999999999999999
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 831 (1005)
||+. ++|.+++... ...+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++.....
T Consensus 95 e~~~-~~l~~~~~~~-~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~----- 167 (308)
T cd06634 95 EYCL-GSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP----- 167 (308)
T ss_pred EccC-CCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecC-----
Confidence 9995 6887777543 24589999999999999999999999999999999999999999999999998743211
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC---CCCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001847 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG---AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 908 (1005)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~---~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~ 908 (1005)
.....|++.|+|||.+.+ ..++.++|||||||++|+|++|..||.......
T Consensus 168 --------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~ 221 (308)
T cd06634 168 --------------------------ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS 221 (308)
T ss_pred --------------------------cccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHH
Confidence 123457889999999753 456789999999999999999999998776666
Q ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCC
Q 001847 909 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 964 (1005)
Q Consensus 909 ~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~ 964 (1005)
....+.....+.......+..+.+||.+||..+|++||+ +.++++|||+...
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~----~~~ll~~~~~~~~ 273 (308)
T cd06634 222 ALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPT----SEVLLKHRFVLRE 273 (308)
T ss_pred HHHHHhhcCCCCcCcccccHHHHHHHHHHhhCCcccCCC----HHHHhhCcccccc
Confidence 555565555444444457788999999999999999999 9999999999974
No 284
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=6.6e-34 Score=309.03 Aligned_cols=254 Identities=28% Similarity=0.452 Sum_probs=217.3
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 752 (1005)
+|++.+.||.|++|.||++.+..+++.+++|.+..... .......+.+|+.+++.++|+||+++++++......|+|||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSM-SQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVME 79 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhc-cHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEeh
Confidence 48899999999999999999999999999999876533 23445677789999999999999999999999999999999
Q ss_pred ccCCCchhhHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001847 753 YCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (1005)
Q Consensus 753 ~~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 830 (1005)
|+++++|..++... ....+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.+||+|||++......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~--- 156 (256)
T cd08530 80 YAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN--- 156 (256)
T ss_pred hcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccC---
Confidence 99999999998652 2245899999999999999999999999999999999999999999999999988543211
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001847 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 910 (1005)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~ 910 (1005)
......+++.|++||.+.+..++.++|+||||+++|+|++|+.||...+.....
T Consensus 157 --------------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~ 210 (256)
T cd08530 157 --------------------------MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLR 210 (256)
T ss_pred --------------------------CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 111235788999999998888889999999999999999999999888776666
Q ss_pred HHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCC
Q 001847 911 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 961 (1005)
Q Consensus 911 ~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff 961 (1005)
..+........ ....+.++.+++.+||..+|++||+ +.++++||++
T Consensus 211 ~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~Rp~----~~~~l~~p~~ 256 (256)
T cd08530 211 YKVQRGKYPPI-PPIYSQDLQNFIRSMLQVKPKLRPN----CDKILASPAV 256 (256)
T ss_pred HHHhcCCCCCC-chhhCHHHHHHHHHHcCCCcccCCC----HHHHhcCCCC
Confidence 66555443322 2356788999999999999999999 9999999985
No 285
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=8e-34 Score=309.78 Aligned_cols=253 Identities=24% Similarity=0.355 Sum_probs=210.9
Q ss_pred ccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001847 668 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 747 (1005)
Q Consensus 668 ~i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 747 (1005)
.+..++|++.+.||.|+||.||++.+. .++.+++|.+.... .....+.+|+.+++.++|+||+++++++......
T Consensus 2 ~~~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 76 (261)
T cd05034 2 EIPRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGT----MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPI 76 (261)
T ss_pred ccchhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCc----cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCce
Confidence 356789999999999999999999974 55789999987542 2345688899999999999999999999998999
Q ss_pred EEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001847 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (1005)
Q Consensus 748 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 827 (1005)
++||||+.+++|.+++.......++...+..++.||+.||.|||++|++|+||||+||++++++.++|+|||++......
T Consensus 77 ~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~ 156 (261)
T cd05034 77 YIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDD 156 (261)
T ss_pred EEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccch
Confidence 99999999999999998765567899999999999999999999999999999999999999999999999988543210
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCh
Q 001847 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 906 (1005)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~Pf~~~~~ 906 (1005)
.. .......++..|+|||.+.+..++.++|||||||++|+|++ |+.||.+...
T Consensus 157 ~~--------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~ 210 (261)
T cd05034 157 EY--------------------------TAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN 210 (261)
T ss_pred hh--------------------------hhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 00 00011234568999999998888999999999999999998 9999988877
Q ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHH
Q 001847 907 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 956 (1005)
Q Consensus 907 ~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL 956 (1005)
......+... ...+.....+..+.+++.+||..+|++||+ +++++
T Consensus 211 ~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~----~~~l~ 255 (261)
T cd05034 211 REVLEQVERG-YRMPRPPNCPEELYDLMLQCWDKDPEERPT----FEYLQ 255 (261)
T ss_pred HHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHcccCcccCCC----HHHHH
Confidence 7777666543 333334446788999999999999999999 55554
No 286
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=1.3e-33 Score=305.12 Aligned_cols=252 Identities=31% Similarity=0.513 Sum_probs=213.7
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 752 (1005)
.|.+.+.||+|++|.||++.+..++..+++|.+..... .....+.+|+.+++.++|+||+++++++......++++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e 77 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK---EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVME 77 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEe
Confidence 48889999999999999999988899999999876532 355778899999999999999999999999999999999
Q ss_pred ccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001847 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (1005)
Q Consensus 753 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 832 (1005)
|+++++|.+++.... ..++...+..++.|++.+|.|||++|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 78 ~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~---- 152 (253)
T cd05122 78 FCSGGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTK---- 152 (253)
T ss_pred cCCCCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeeccccccccccc----
Confidence 999999999987643 458999999999999999999999999999999999999999999999999885432110
Q ss_pred CcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001847 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 912 (1005)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~~ 912 (1005)
......++..|++||.+.+...+.++|+||||+++|+|++|..||...+.......
T Consensus 153 ------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~ 208 (253)
T cd05122 153 ------------------------ARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFK 208 (253)
T ss_pred ------------------------cccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHH
Confidence 02235688899999999888888999999999999999999999987755444444
Q ss_pred HHhCCC-CCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCC
Q 001847 913 ILHKDL-KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 960 (1005)
Q Consensus 913 i~~~~~-~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpf 960 (1005)
+..... ..+.....+..+.++|.+||..||.+||+ +.++++|||
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t----~~~~l~~~~ 253 (253)
T cd05122 209 IATNGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPT----AEQLLKHPF 253 (253)
T ss_pred HHhcCCCCcCcccccCHHHHHHHHHHccCChhhCCC----HHHHhcCCC
Confidence 433222 22222223788999999999999999999 999999998
No 287
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=5.4e-34 Score=324.58 Aligned_cols=259 Identities=24% Similarity=0.375 Sum_probs=206.5
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC------
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 744 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------ 744 (1005)
..+|++.+.||.|+||.||+|.+..+++.||+|.+.... ......+.+|+.+++.++||||+++++++...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~---~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTD---PQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTE 80 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCC---CchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccc
Confidence 368999999999999999999999999999999886542 24456678899999999999999999776543
Q ss_pred --------CeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEec-CCcEEE
Q 001847 745 --------THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSL 815 (1005)
Q Consensus 745 --------~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~-~g~vkL 815 (1005)
...|+||||+. ++|.+++.. ..+++..++.++.||+.||.|||+.||+||||||+||+++. ++.++|
T Consensus 81 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl 156 (342)
T cd07854 81 DVGSLTELNSVYIVQEYME-TDLANVLEQ---GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKI 156 (342)
T ss_pred ccccccccceEEEEeeccc-ccHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEE
Confidence 35899999995 689888764 34899999999999999999999999999999999999984 567899
Q ss_pred EeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHH
Q 001847 816 TDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEM 894 (1005)
Q Consensus 816 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlGvll~eL 894 (1005)
+|||++........ .........++..|+|||.+.. ..++.++|||||||++|+|
T Consensus 157 ~dfg~~~~~~~~~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el 212 (342)
T cd07854 157 GDFGLARIVDPHYS------------------------HKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEM 212 (342)
T ss_pred CCcccceecCCccc------------------------cccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHH
Confidence 99998854321100 0001112357889999998754 4577899999999999999
Q ss_pred HcCCCCCCCCChHHHHHHHHhCCCC----------------------CC------CCCCCCHHHHHHHHHccccCcCccC
Q 001847 895 LYGYTPFRGKTRQKTFANILHKDLK----------------------FP------SSTPTSLHAKQLMYRLLHRDPKSRL 946 (1005)
Q Consensus 895 ltG~~Pf~~~~~~~~~~~i~~~~~~----------------------~~------~~~~~s~~l~~Ll~~~L~~dP~~Rp 946 (1005)
++|+.||.+.+.......+...... .+ .....+.++.+||.+||+.||.+||
T Consensus 213 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ 292 (342)
T cd07854 213 LTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRL 292 (342)
T ss_pred HhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhcc
Confidence 9999999877665555444322100 00 0123567889999999999999999
Q ss_pred CChhcHHHHHcCCCCCCC
Q 001847 947 GSHEGANEIKKHPFFKGV 964 (1005)
Q Consensus 947 t~~~~a~elL~hpff~~~ 964 (1005)
+ +.++|+||||+.+
T Consensus 293 t----~~ell~h~~~~~~ 306 (342)
T cd07854 293 T----AEEALMHPYMSCY 306 (342)
T ss_pred C----HHHHhCCCccccc
Confidence 9 9999999999864
No 288
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=1.5e-33 Score=305.56 Aligned_cols=254 Identities=27% Similarity=0.462 Sum_probs=217.4
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 752 (1005)
+|++.+.||+|++|.||++.+..+++.|++|.+..... .......+.+|++++++++|+|++++++++...+..+++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKI-KEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILE 79 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEe
Confidence 48899999999999999999988999999999987533 23456788899999999999999999999999999999999
Q ss_pred ccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001847 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (1005)
Q Consensus 753 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 832 (1005)
|+.+++|.+++... ..+++..+..++.|++.+|.|||++||+|+||+|+||+++.++.++|+|||++........
T Consensus 80 ~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--- 154 (254)
T cd06627 80 YAENGSLRQIIKKF--GPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK--- 154 (254)
T ss_pred cCCCCcHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCcc---
Confidence 99999999998765 4589999999999999999999999999999999999999999999999999855431110
Q ss_pred CcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001847 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 912 (1005)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~~ 912 (1005)
......++..|+|||.+.+...+.++||||||+++|+|++|..||...........
T Consensus 155 ------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~ 210 (254)
T cd06627 155 ------------------------DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFR 210 (254)
T ss_pred ------------------------cccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHH
Confidence 01234678899999999887788899999999999999999999987766555555
Q ss_pred HHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCC
Q 001847 913 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 961 (1005)
Q Consensus 913 i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff 961 (1005)
+...... ......+..+.+++.+||..+|++||+ +.+++.||||
T Consensus 211 ~~~~~~~-~~~~~~~~~~~~~i~~~l~~~p~~R~~----~~~~l~~~~~ 254 (254)
T cd06627 211 IVQDDHP-PLPEGISPELKDFLMQCFQKDPNLRPT----AKQLLKHPWI 254 (254)
T ss_pred HhccCCC-CCCCCCCHHHHHHHHHHHhCChhhCcC----HHHHhcCCCC
Confidence 5433222 223346788999999999999999999 9999999997
No 289
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=4.2e-35 Score=302.62 Aligned_cols=264 Identities=28% Similarity=0.459 Sum_probs=210.3
Q ss_pred cCCccccccccccCcEEEEEEEEcCCC----eEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEe-CC
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSG----QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT-KT 745 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~----~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~ 745 (1005)
...|+++..||+|.||.||+|..+.++ +.||+|.++.....+ ......++|+.+++.++||||+.+..+|.. +.
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~t-GiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~ 101 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGT-GISMSACREIALLRELKHPNVISLVKVFLSHDK 101 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCC-CcCHHHHHHHHHHHHhcCCcchhHHHHHhccCc
Confidence 458999999999999999999765553 378999987653222 223456789999999999999999999877 78
Q ss_pred eEEEEEeccCCCchhhHHhhC---CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecC----CcEEEEec
Q 001847 746 HVCLITDYCPGGELFLLLDRQ---PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN----GHVSLTDF 818 (1005)
Q Consensus 746 ~~~lV~E~~~ggsL~~~l~~~---~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~----g~vkL~DF 818 (1005)
.+++++||. .-+|++.++.+ ....++...++.|+.||+.|+.|||++-|+||||||.|||+..+ |.|||+||
T Consensus 102 ~v~l~fdYA-EhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDl 180 (438)
T KOG0666|consen 102 KVWLLFDYA-EHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADL 180 (438)
T ss_pred eEEEEehhh-hhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecc
Confidence 999999999 66888888742 23468999999999999999999999999999999999999988 89999999
Q ss_pred cCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcC
Q 001847 819 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYG 897 (1005)
Q Consensus 819 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlGvll~eLltG 897 (1005)
|+++..... ..+....+.++.|.+|+|||.+.+. .|+++.|||+.||++.||++-
T Consensus 181 GlaR~~~~p------------------------lkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl 236 (438)
T KOG0666|consen 181 GLARLFNNP------------------------LKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTL 236 (438)
T ss_pred cHHHHhhcc------------------------ccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHcc
Confidence 999775422 2334455678899999999999886 578899999999999999999
Q ss_pred CCCCCCCC---------hHHHHHHHHh--C---CCCCCCC------------------------------CCCCHHHHHH
Q 001847 898 YTPFRGKT---------RQKTFANILH--K---DLKFPSS------------------------------TPTSLHAKQL 933 (1005)
Q Consensus 898 ~~Pf~~~~---------~~~~~~~i~~--~---~~~~~~~------------------------------~~~s~~l~~L 933 (1005)
++.|.+.. ....+.+|+. + .-.||.. ..-++...+|
T Consensus 237 ~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~L 316 (438)
T KOG0666|consen 237 EPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDL 316 (438)
T ss_pred CccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHH
Confidence 99886522 1233444433 1 0111110 1123346799
Q ss_pred HHHccccCcCccCCChhcHHHHHcCCCCCCC
Q 001847 934 MYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 964 (1005)
Q Consensus 934 l~~~L~~dP~~Rpt~~~~a~elL~hpff~~~ 964 (1005)
+.+||..||-+|+| ++++|+|+||+.-
T Consensus 317 L~klL~yDP~kRIt----a~qAleh~yF~~d 343 (438)
T KOG0666|consen 317 LQKLLTYDPIKRIT----AEQALEHPYFTED 343 (438)
T ss_pred HHHHhccCchhhcc----HHHHhcccccccC
Confidence 99999999999999 9999999999964
No 290
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=8e-34 Score=315.95 Aligned_cols=257 Identities=25% Similarity=0.353 Sum_probs=208.8
Q ss_pred ccCCccccccccccCcEEEEEEEEcCCC----------------eEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCC
Q 001847 670 NLQHFRPIKPLGSGDTGSVHLVELCGSG----------------QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPF 733 (1005)
Q Consensus 670 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~----------------~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpn 733 (1005)
...+|++++.||+|+||.||+|.+..++ ..+|+|.+.... .......+.+|+.++++++|||
T Consensus 3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l~~~~ 80 (296)
T cd05051 3 PRQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA--SDNAREDFLKEVKILSRLSDPN 80 (296)
T ss_pred chhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc--CHHHHHHHHHHHHHHHhcCCCC
Confidence 3568999999999999999999886543 568999987543 2345667888999999999999
Q ss_pred cceEEEEEEeCCeEEEEEeccCCCchhhHHhhCC---------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCc
Q 001847 734 VPALYASFQTKTHVCLITDYCPGGELFLLLDRQP---------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 804 (1005)
Q Consensus 734 Iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~---------~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~N 804 (1005)
|+++++++...+..+++|||+.+++|.+++.... ...+++..++.++.|++.||.|||++||+|+||||+|
T Consensus 81 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~N 160 (296)
T cd05051 81 IARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRN 160 (296)
T ss_pred EeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhc
Confidence 9999999999999999999999999999987643 1258999999999999999999999999999999999
Q ss_pred EEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhH
Q 001847 805 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 884 (1005)
Q Consensus 805 ILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDI 884 (1005)
|+++.++.++|+|||++....... .........+++.|+|||++....++.++||
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv 215 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSD-------------------------YYRVQGRAPLPIRWMAWESVLLGKFTTKSDV 215 (296)
T ss_pred eeecCCCceEEccccceeecccCc-------------------------ceeecCcCCCCceecCHHHhhcCCCCccchh
Confidence 999999999999999885432110 0011223456788999999988888999999
Q ss_pred HHHHHHHHHHHc--CCCCCCCCChHHHHHHHHhC------CCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHH
Q 001847 885 WALGILLYEMLY--GYTPFRGKTRQKTFANILHK------DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 956 (1005)
Q Consensus 885 wSlGvll~eLlt--G~~Pf~~~~~~~~~~~i~~~------~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL 956 (1005)
|||||++|+|++ |..||........+..+... ....+.....+.++.+|+.+||+.||.+||+ +.+++
T Consensus 216 ~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt----~~el~ 291 (296)
T cd05051 216 WAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPT----FREIH 291 (296)
T ss_pred hhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCC----HHHHH
Confidence 999999999997 78899877666665555432 1122233346789999999999999999999 66664
Q ss_pred c
Q 001847 957 K 957 (1005)
Q Consensus 957 ~ 957 (1005)
+
T Consensus 292 ~ 292 (296)
T cd05051 292 L 292 (296)
T ss_pred H
Confidence 3
No 291
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=8.9e-34 Score=309.62 Aligned_cols=251 Identities=24% Similarity=0.343 Sum_probs=204.8
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 001847 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 748 (1005)
Q Consensus 669 i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 748 (1005)
+..++|++...||+|++|.||++.+..+ ..+|+|.+.... .....+.+|+.+++.++|+|++++++++. .+..|
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~ 76 (260)
T cd05069 3 IPRESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGT----MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIY 76 (260)
T ss_pred CChHHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCC----ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcE
Confidence 4456899999999999999999998554 468999876532 22356778999999999999999998875 45689
Q ss_pred EEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 001847 749 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 828 (1005)
Q Consensus 749 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~ 828 (1005)
+||||+.+++|.+++.......++...+..++.||+.||.|||+.|++|+||||+||++++++.++|+|||.+.......
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05069 77 IVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNE 156 (260)
T ss_pred EEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCc
Confidence 99999999999999976555568999999999999999999999999999999999999999999999999985432110
Q ss_pred CCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChH
Q 001847 829 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 907 (1005)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~Pf~~~~~~ 907 (1005)
........++..|+|||.+.+..++.++||||||+++|+|++ |..||.+....
T Consensus 157 --------------------------~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~ 210 (260)
T cd05069 157 --------------------------YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR 210 (260)
T ss_pred --------------------------ccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 001112245678999999988888999999999999999999 99999888777
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHH
Q 001847 908 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 956 (1005)
Q Consensus 908 ~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL 956 (1005)
.....+... ...+.....+..+.+|+.+||..+|++||+ +++++
T Consensus 211 ~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~i~ 254 (260)
T cd05069 211 EVLEQVERG-YRMPCPQGCPESLHELMKLCWKKDPDERPT----FEYIQ 254 (260)
T ss_pred HHHHHHHcC-CCCCCCcccCHHHHHHHHHHccCCcccCcC----HHHHH
Confidence 666655443 333333456788999999999999999999 55554
No 292
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=3.2e-34 Score=326.53 Aligned_cols=278 Identities=27% Similarity=0.407 Sum_probs=220.4
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe----
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH---- 746 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~---- 746 (1005)
.++|++.+.||+|++|.||++.+..++..||+|.+.... ........+.+|+.+++.++|+||+++++++.....
T Consensus 14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPF-QSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred cCceEEEEEeccCCceEEEEEEECCCCcEEEEEeccccc-chhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 468999999999999999999999999999999887542 233445667789999999999999999988866554
Q ss_pred --EEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCccc
Q 001847 747 --VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 824 (1005)
Q Consensus 747 --~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~ 824 (1005)
.|+|+||+ +++|.+++.. ..+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||++...
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~ 168 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKC---QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHT 168 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEccccccccc
Confidence 89999999 7899998865 35899999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001847 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRG 903 (1005)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlGvll~eLltG~~Pf~~ 903 (1005)
... .....+++.|+|||.+.+ ..++.++|||||||++|+|++|+.||.+
T Consensus 169 ~~~------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~ 218 (343)
T cd07851 169 DDE------------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPG 218 (343)
T ss_pred ccc------------------------------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 210 123357888999999865 3577899999999999999999999988
Q ss_pred CChHHHHHHHHhCCCCC----------------------C-------CCCCCCHHHHHHHHHccccCcCccCCChhcHHH
Q 001847 904 KTRQKTFANILHKDLKF----------------------P-------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 954 (1005)
Q Consensus 904 ~~~~~~~~~i~~~~~~~----------------------~-------~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~e 954 (1005)
......+..+....... . .....+..+.+||.+||..+|.+||| +.+
T Consensus 219 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt----~~e 294 (343)
T cd07851 219 SDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRIT----AAE 294 (343)
T ss_pred CChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCC----HHH
Confidence 77766555544321000 0 01235778999999999999999999 999
Q ss_pred HHcCCCCCCCChhhhhhcCCCCCCCCCCCCccccccccC
Q 001847 955 IKKHPFFKGVNWALVRCMNPPELDAPLFATDTEKEYKVV 993 (1005)
Q Consensus 955 lL~hpff~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 993 (1005)
+++||||... ... .++...+++.++.......+
T Consensus 295 ll~h~~~~~~--~~~----~~~~~~~~~~~~~~~~~~~~ 327 (343)
T cd07851 295 ALAHPYLAEY--HDP----EDEPVAPPYDQSFESRDLTV 327 (343)
T ss_pred HhcCCCcccc--CCC----cccccccccCcchhhhhcCH
Confidence 9999999964 222 12222455555555544433
No 293
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=6.5e-34 Score=319.69 Aligned_cols=256 Identities=24% Similarity=0.346 Sum_probs=201.0
Q ss_pred CcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCCchhhHH
Q 001847 684 DTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGELFLLL 763 (1005)
Q Consensus 684 ~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ggsL~~~l 763 (1005)
+++.||++.+..+++.||+|.+.... ........+.+|+.+++.++|+||++++++|...+..|++|||+++++|.+++
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~-~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l 90 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDS-CSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLL 90 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccc-cchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHH
Confidence 44556666666799999999997642 24456678999999999999999999999999999999999999999999999
Q ss_pred hhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhccc
Q 001847 764 DRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHK 843 (1005)
Q Consensus 764 ~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~ 843 (1005)
.......+++..+..++.||+.||.|||++||+|+||||+||+++.+|.+||+|||.+..........
T Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~------------ 158 (314)
T cd08216 91 KTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQ------------ 158 (314)
T ss_pred HHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeeccccccc------------
Confidence 86545568999999999999999999999999999999999999999999999999885432111000
Q ss_pred CCCCCcccccccccccccccCCcccccccccCC--CCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCCC-
Q 001847 844 GQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA--GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKF- 920 (1005)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~--~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~~i~~~~~~~- 920 (1005)
...........++..|+|||++... .++.++|||||||++|+|++|..||..............+....
T Consensus 159 --------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 230 (314)
T cd08216 159 --------RVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCL 230 (314)
T ss_pred --------cccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccc
Confidence 0001112334678899999998663 47789999999999999999999998765544332222211100
Q ss_pred -------------------------------CCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCC
Q 001847 921 -------------------------------PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 964 (1005)
Q Consensus 921 -------------------------------~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~ 964 (1005)
......+.++.+|+.+||.+||++||+ ++++|+||||+.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~~ll~~p~~~~~ 301 (314)
T cd08216 231 LDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPS----ASQLLNHSFFKQC 301 (314)
T ss_pred cccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcC----HHHHhcCchHhhh
Confidence 000112456789999999999999999 9999999999975
No 294
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=9.7e-34 Score=313.38 Aligned_cols=254 Identities=24% Similarity=0.437 Sum_probs=207.4
Q ss_pred ccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC---CCCCcceEEEEEEeCCe----
Q 001847 674 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML---DHPFVPALYASFQTKTH---- 746 (1005)
Q Consensus 674 y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l---~hpnIv~l~~~~~~~~~---- 746 (1005)
|++.+.||.|+||.||++.+..+++.||+|.++.... .......+.+|+.+++++ +|+||+++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~ 79 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLS-EEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDREL 79 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccc-cchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCc
Confidence 7788999999999999999988899999999975432 222334556677777666 69999999999987776
Q ss_pred -EEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 001847 747 -VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 825 (1005)
Q Consensus 747 -~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~ 825 (1005)
++++|||+. ++|.+++.......+++..++.++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||.+....
T Consensus 80 ~~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~ 158 (287)
T cd07838 80 KLTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYS 158 (287)
T ss_pred eeEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceecc
Confidence 999999995 589988876544568999999999999999999999999999999999999999999999999885432
Q ss_pred CCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001847 826 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 905 (1005)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~ 905 (1005)
... ......++..|+|||++.+..++.++|||||||++|+|++|++||.+..
T Consensus 159 ~~~----------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~ 210 (287)
T cd07838 159 FEM----------------------------ALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTS 210 (287)
T ss_pred CCc----------------------------ccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCC
Confidence 110 0112347889999999998888999999999999999999999999887
Q ss_pred hHHHHHHHHhCC-----CCCC-----------C---------CCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCC
Q 001847 906 RQKTFANILHKD-----LKFP-----------S---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 960 (1005)
Q Consensus 906 ~~~~~~~i~~~~-----~~~~-----------~---------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpf 960 (1005)
..+.+.++.... ..++ . ....+..+.+||.+||+.||.+||+ +.++++|||
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~----~~~il~~~~ 286 (287)
T cd07838 211 EADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRIS----AFEALQHPY 286 (287)
T ss_pred hHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCC----HHHHhcCcC
Confidence 777666665421 0000 0 0123467789999999999999999 999999999
Q ss_pred C
Q 001847 961 F 961 (1005)
Q Consensus 961 f 961 (1005)
|
T Consensus 287 ~ 287 (287)
T cd07838 287 F 287 (287)
T ss_pred C
Confidence 8
No 295
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=1.1e-33 Score=310.68 Aligned_cols=253 Identities=24% Similarity=0.334 Sum_probs=204.6
Q ss_pred ccccccccccCcEEEEEEEEcCC---CeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe----
Q 001847 674 FRPIKPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH---- 746 (1005)
Q Consensus 674 y~~~~~LG~G~~g~Vy~a~~~~~---~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~---- 746 (1005)
|++.+.||+|+||.||++.+..+ +..||+|.++... ........+.+|+.+++.++||||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 79 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDI-HTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKI 79 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCc-CCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccC
Confidence 67889999999999999997543 4789999987542 234455678899999999999999999998765443
Q ss_pred --EEEEEeccCCCchhhHHhhC----CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccC
Q 001847 747 --VCLITDYCPGGELFLLLDRQ----PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 820 (1005)
Q Consensus 747 --~~lV~E~~~ggsL~~~l~~~----~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~ 820 (1005)
.+++|||+++++|..++... ....+++..+..++.||+.||.|||++|++|+||||+||++++++.+||+|||+
T Consensus 80 ~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~ 159 (273)
T cd05035 80 PKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGL 159 (273)
T ss_pred cccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccc
Confidence 79999999999999888542 223589999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCC
Q 001847 821 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYT 899 (1005)
Q Consensus 821 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~ 899 (1005)
+........ ........++..|+|||.+....++.++|||||||++|+|++ |..
T Consensus 160 ~~~~~~~~~-------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~ 214 (273)
T cd05035 160 SKKIYSGDY-------------------------YRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQT 214 (273)
T ss_pred eeecccccc-------------------------ccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCC
Confidence 854321110 001112234678999999988888999999999999999998 999
Q ss_pred CCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHc
Q 001847 900 PFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 957 (1005)
Q Consensus 900 Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 957 (1005)
||.+....+.+..+..+. ........+..+.+++.+||..||.+||+ +.++++
T Consensus 215 p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~e~~~ 267 (273)
T cd05035 215 PYPGVENHEIYDYLRHGN-RLKQPEDCLDELYDLMYSCWRADPKDRPT----FTKLRE 267 (273)
T ss_pred CCCCCCHHHHHHHHHcCC-CCCCCcCCCHHHHHHHHHHcCCChhhCcC----HHHHHH
Confidence 998887777766665543 23333457889999999999999999999 555554
No 296
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1.3e-33 Score=307.19 Aligned_cols=249 Identities=24% Similarity=0.370 Sum_probs=209.9
Q ss_pred ccccccCcEEEEEEEEcCC---CeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEecc
Q 001847 678 KPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYC 754 (1005)
Q Consensus 678 ~~LG~G~~g~Vy~a~~~~~---~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~ 754 (1005)
+.||+|+||.||+|.+... +..|++|.+..... ......+.+|+.+++.++|+||+++++++.....+++||||+
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 78 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDAS--EEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYM 78 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccc--hhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEec
Confidence 4689999999999999765 88999999886532 224678889999999999999999999999999999999999
Q ss_pred CCCchhhHHhhCC-------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001847 755 PGGELFLLLDRQP-------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (1005)
Q Consensus 755 ~ggsL~~~l~~~~-------~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 827 (1005)
++++|.+++.... ...+++..+..++.||+.||+|||++|++|+||+|+||+++.++.++|+|||.+......
T Consensus 79 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~ 158 (262)
T cd00192 79 EGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDD 158 (262)
T ss_pred cCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccccccccc
Confidence 9999999997641 256899999999999999999999999999999999999999999999999998654321
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCh
Q 001847 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 906 (1005)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~Pf~~~~~ 906 (1005)
.. ........+++.|+|||.+....++.++|||||||++|+|++ |..||.....
T Consensus 159 ~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~ 213 (262)
T cd00192 159 DY-------------------------YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN 213 (262)
T ss_pred cc-------------------------cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH
Confidence 10 011233457889999999988888999999999999999998 6999998877
Q ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcC
Q 001847 907 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 958 (1005)
Q Consensus 907 ~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~h 958 (1005)
......+... ........++..+.+++.+||..+|.+||+ +.+++++
T Consensus 214 ~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~l~~~ 260 (262)
T cd00192 214 EEVLEYLRKG-YRLPKPEYCPDELYELMLSCWQLDPEDRPT----FSELVER 260 (262)
T ss_pred HHHHHHHHcC-CCCCCCccCChHHHHHHHHHccCCcccCcC----HHHHHHh
Confidence 7766666653 233333456889999999999999999999 8888765
No 297
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=9.6e-34 Score=314.90 Aligned_cols=256 Identities=21% Similarity=0.295 Sum_probs=209.3
Q ss_pred cCCccccccccccCcEEEEEEEEcC-----CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 745 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~-----~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 745 (1005)
..+|.+.+.||+|+||.||++.+.. ++..+++|.+... .......+.+|+.++++++|+||+++++++...+
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 80 (291)
T cd05094 4 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDP---TLAARKDFQREAELLTNLQHEHIVKFYGVCGDGD 80 (291)
T ss_pred hHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCc---cHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCC
Confidence 4579999999999999999998633 4567899987643 2344467888999999999999999999999999
Q ss_pred eEEEEEeccCCCchhhHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCC
Q 001847 746 HVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG 811 (1005)
Q Consensus 746 ~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g 811 (1005)
..++||||+++++|.+++.... ...+++..++.++.||+.||+|||++||+||||||+||+++.++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~ 160 (291)
T cd05094 81 PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANL 160 (291)
T ss_pred ceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCC
Confidence 9999999999999999987532 23488999999999999999999999999999999999999999
Q ss_pred cEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHH
Q 001847 812 HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILL 891 (1005)
Q Consensus 812 ~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll 891 (1005)
.++|+|||++........ ........+++.|+|||++.+..++.++|||||||++
T Consensus 161 ~~~l~dfg~a~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 215 (291)
T cd05094 161 LVKIGDFGMSRDVYSTDY-------------------------YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVIL 215 (291)
T ss_pred cEEECCCCcccccCCCce-------------------------eecCCCCCcceeecChHHhccCCCCchhhHHHHHHHH
Confidence 999999999854321110 0111234567889999999888889999999999999
Q ss_pred HHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHH
Q 001847 892 YEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 955 (1005)
Q Consensus 892 ~eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~el 955 (1005)
|+|++ |..||......+....+..+.... .....+..+.+|+.+||..+|++||++.++++.+
T Consensus 216 ~el~t~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l 279 (291)
T cd05094 216 WEIFTYGKQPWFQLSNTEVIECITQGRVLE-RPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKIL 279 (291)
T ss_pred HHHHhCCCCCCCCCCHHHHHHHHhCCCCCC-CCccCCHHHHHHHHHHcccChhhCcCHHHHHHHH
Confidence 99998 999998887777666665544332 2234678899999999999999999955544433
No 298
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1.6e-33 Score=306.59 Aligned_cols=245 Identities=22% Similarity=0.339 Sum_probs=206.3
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 001847 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 748 (1005)
Q Consensus 669 i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 748 (1005)
+...+|++.+.||.|+||.||++.+ .++.+|+|.+.... .....+.+|+.+++.++|+||+++++++...+..|
T Consensus 3 ~~~~~~~~~~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 76 (256)
T cd05039 3 INSKELKLGATIGKGEFGDVMLGDY--RGQKVAVKCLKDDS----TAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLY 76 (256)
T ss_pred cChhhccceeeeecCCCceEEEEEe--cCcEEEEEEeccch----hHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeE
Confidence 4567899999999999999999987 47899999987542 14567889999999999999999999999899999
Q ss_pred EEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 001847 749 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 828 (1005)
Q Consensus 749 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~ 828 (1005)
+||||+++++|.+++.......+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||.+......
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~- 155 (256)
T cd05039 77 IVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQG- 155 (256)
T ss_pred EEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEcccccccccccc-
Confidence 9999999999999998765456999999999999999999999999999999999999999999999999988543110
Q ss_pred CCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChH
Q 001847 829 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 907 (1005)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~Pf~~~~~~ 907 (1005)
.....++..|+|||++....++.++||||||+++|+|++ |..||......
T Consensus 156 -----------------------------~~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~ 206 (256)
T cd05039 156 -----------------------------QDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK 206 (256)
T ss_pred -----------------------------cccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH
Confidence 001234567999999988888999999999999999997 99999887766
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChh
Q 001847 908 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 950 (1005)
Q Consensus 908 ~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~ 950 (1005)
.....+... .........+..+.+||.+||..+|++||++.+
T Consensus 207 ~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ 248 (256)
T cd05039 207 DVVPHVEKG-YRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQ 248 (256)
T ss_pred HHHHHHhcC-CCCCCccCCCHHHHHHHHHHhccChhhCcCHHH
Confidence 655544433 222233446789999999999999999999433
No 299
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1.2e-33 Score=312.23 Aligned_cols=253 Identities=20% Similarity=0.299 Sum_probs=207.4
Q ss_pred cccCCccccccccccCcEEEEEEEEc-----CCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 001847 669 INLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 743 (1005)
Q Consensus 669 i~~~~y~~~~~LG~G~~g~Vy~a~~~-----~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 743 (1005)
++..+|++.+.||+|+||.||++... .++..+++|.+... .......+.+|+++++.++|+||+++++++..
T Consensus 2 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 78 (280)
T cd05092 2 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SESARQDFQREAELLTVLQHQHIVRFYGVCTE 78 (280)
T ss_pred CChHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC---CHHHHHHHHHHHHHHhcCCCCCCceEEEEEec
Confidence 34568999999999999999999752 34678999987643 34455678899999999999999999999999
Q ss_pred CCeEEEEEeccCCCchhhHHhhCCC-------------CCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecC
Q 001847 744 KTHVCLITDYCPGGELFLLLDRQPT-------------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN 810 (1005)
Q Consensus 744 ~~~~~lV~E~~~ggsL~~~l~~~~~-------------~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~ 810 (1005)
.+..|++|||+.+++|.+++..... ..++...+..++.||+.||+|||++|++|+||||+|||++++
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~ 158 (280)
T cd05092 79 GRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQG 158 (280)
T ss_pred CCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCC
Confidence 9999999999999999999875421 347889999999999999999999999999999999999999
Q ss_pred CcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHH
Q 001847 811 GHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGIL 890 (1005)
Q Consensus 811 g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvl 890 (1005)
+.+||+|||++........ ........+++.|+|||++.+..++.++|||||||+
T Consensus 159 ~~~kL~dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i 213 (280)
T cd05092 159 LVVKIGDFGMSRDIYSTDY-------------------------YRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVV 213 (280)
T ss_pred CCEEECCCCceeEcCCCce-------------------------eecCCCccccccccCHHHhccCCcCchhhHHHHHHH
Confidence 9999999998854321100 001122345688999999988889999999999999
Q ss_pred HHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChh
Q 001847 891 LYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 950 (1005)
Q Consensus 891 l~eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~ 950 (1005)
+|+|++ |.+||...........+..+.. ......++..+.+||.+||+.||.+||++.+
T Consensus 214 l~el~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ 273 (280)
T cd05092 214 LWEIFTYGKQPWYQLSNTEAIECITQGRE-LERPRTCPPEVYAIMQGCWQREPQQRMVIKD 273 (280)
T ss_pred HHHHHcCCCCCCccCCHHHHHHHHHcCcc-CCCCCCCCHHHHHHHHHHccCChhhCCCHHH
Confidence 999998 9999988777766666655432 2333457888999999999999999999433
No 300
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-34 Score=327.77 Aligned_cols=263 Identities=23% Similarity=0.344 Sum_probs=225.3
Q ss_pred ccccccccCCccccccccccCcEEEEEEEEcCCCe---E-EEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEE
Q 001847 664 DSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQ---Y-FAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYA 739 (1005)
Q Consensus 664 ~~~~~i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~---~-valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~ 739 (1005)
...|++..++..+.+.||+|+||.||++..+..+. . ||+|..+............+.+|++++++++|||||++++
T Consensus 149 r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yG 228 (474)
T KOG0194|consen 149 RQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYG 228 (474)
T ss_pred ccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 34566777788888999999999999999865422 3 8999988654556788899999999999999999999999
Q ss_pred EEEeCCeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEecc
Q 001847 740 SFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFD 819 (1005)
Q Consensus 740 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG 819 (1005)
+......+++|||+|.||+|.++|++.+. .++..+...++.+.+.||+|||++++|||||-..|+|++.++.+||+|||
T Consensus 229 Va~~~~Pl~ivmEl~~gGsL~~~L~k~~~-~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFG 307 (474)
T KOG0194|consen 229 VAVLEEPLMLVMELCNGGSLDDYLKKNKK-SLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFG 307 (474)
T ss_pred EEcCCCccEEEEEecCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccc
Confidence 99999999999999999999999998643 59999999999999999999999999999999999999999999999999
Q ss_pred CCcccCCCCCCCCCcchhhhhcccCCCCCccccccccccc-ccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-C
Q 001847 820 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASN-SFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-G 897 (1005)
Q Consensus 820 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G 897 (1005)
++..... . .... ..--...|+|||.+....++.++|||||||++||+++ |
T Consensus 308 Ls~~~~~---~-------------------------~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g 359 (474)
T KOG0194|consen 308 LSRAGSQ---Y-------------------------VMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENG 359 (474)
T ss_pred cccCCcc---e-------------------------eeccccccCcceecChhhhccCccccccchhheeeeEEeeeccC
Confidence 9854320 0 0000 1123568999999999999999999999999999998 8
Q ss_pred CCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHH
Q 001847 898 YTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 955 (1005)
Q Consensus 898 ~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~el 955 (1005)
..||.+....+....+.......+.+...+..+..++.+|+..+|+.||++..+++.+
T Consensus 360 ~~Py~g~~~~~v~~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l 417 (474)
T KOG0194|consen 360 AEPYPGMKNYEVKAKIVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKL 417 (474)
T ss_pred CCCCCCCCHHHHHHHHHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHH
Confidence 8999999999999999777766666667788999999999999999999976654433
No 301
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=1.8e-33 Score=306.73 Aligned_cols=248 Identities=21% Similarity=0.290 Sum_probs=200.4
Q ss_pred cccccCcEEEEEEEE--cCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCC
Q 001847 679 PLGSGDTGSVHLVEL--CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPG 756 (1005)
Q Consensus 679 ~LG~G~~g~Vy~a~~--~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~g 756 (1005)
.||+|+||.||++.+ ..++..+|+|+++.. .........+.+|+.+++.++||||+++++++.. ...++||||+++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~ 79 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKND-NNDPALKDELLREANVMQQLDNPYIVRMIGICEA-ESWMLVMELAEL 79 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCC-CCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCcEEEEecCCC
Confidence 589999999999965 456789999998754 2234456778899999999999999999998754 567999999999
Q ss_pred CchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 001847 757 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 836 (1005)
Q Consensus 757 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 836 (1005)
++|.+++... ..+++..+..++.||+.||.|||++||+|+||||+||+++.++.+||+|||++.........
T Consensus 80 ~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~------ 151 (257)
T cd05116 80 GPLNKFLQKN--KHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENY------ 151 (257)
T ss_pred CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCe------
Confidence 9999999754 35899999999999999999999999999999999999999999999999998654321110
Q ss_pred hhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHHHHHHHHh
Q 001847 837 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILH 915 (1005)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~Pf~~~~~~~~~~~i~~ 915 (1005)
........+++.|+|||.+....++.++|||||||++|+|++ |..||...........+..
T Consensus 152 ------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~ 213 (257)
T cd05116 152 ------------------YKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIES 213 (257)
T ss_pred ------------------eeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHC
Confidence 000111234678999999988888899999999999999997 9999988777666666554
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHH
Q 001847 916 KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 955 (1005)
Q Consensus 916 ~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~el 955 (1005)
+. ..+.....+.++.+||.+||+.||++||++..+...|
T Consensus 214 ~~-~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l 252 (257)
T cd05116 214 GE-RMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRL 252 (257)
T ss_pred CC-CCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHH
Confidence 43 2333345788999999999999999999965544333
No 302
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=1.3e-33 Score=309.53 Aligned_cols=252 Identities=23% Similarity=0.331 Sum_probs=206.9
Q ss_pred cCCccccccccccCcEEEEEEEEcCCC---eEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSG---QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 747 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~---~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 747 (1005)
..+|++.+.||+|+||.||++.+..++ ..+|+|.++... .......+.+|+.+++.++||||+++++++...+.+
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 80 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY--TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPV 80 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCcc
Confidence 468999999999999999999986444 379999887542 233456788899999999999999999999999999
Q ss_pred EEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001847 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (1005)
Q Consensus 748 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 827 (1005)
|+||||+++++|.+++.... ..++...+..++.|++.||.|||+.|++|+||||+|||++.++.++|+|||++......
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd05066 81 MIVTEYMENGSLDAFLRKHD-GQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 159 (267)
T ss_pred EEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCcccccccc
Confidence 99999999999999997653 45899999999999999999999999999999999999999999999999998654321
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCh
Q 001847 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 906 (1005)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~Pf~~~~~ 906 (1005)
... ........++..|+|||.+.+..++.++|+|||||++|++++ |..||.+...
T Consensus 160 ~~~------------------------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~ 215 (267)
T cd05066 160 PEA------------------------AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSN 215 (267)
T ss_pred cce------------------------eeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCH
Confidence 100 000111233568999999988889999999999999999886 9999988777
Q ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChh
Q 001847 907 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 950 (1005)
Q Consensus 907 ~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~ 950 (1005)
.+....+... ...+.....+..+.+++.+||+.+|.+||++.+
T Consensus 216 ~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ 258 (267)
T cd05066 216 QDVIKAIEEG-YRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQ 258 (267)
T ss_pred HHHHHHHhCC-CcCCCCCCCCHHHHHHHHHHcccCchhCCCHHH
Confidence 6666655544 334444557888999999999999999999444
No 303
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=2e-33 Score=305.91 Aligned_cols=248 Identities=22% Similarity=0.339 Sum_probs=206.0
Q ss_pred ccccccCcEEEEEEEEcC-CC--eEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEecc
Q 001847 678 KPLGSGDTGSVHLVELCG-SG--QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYC 754 (1005)
Q Consensus 678 ~~LG~G~~g~Vy~a~~~~-~~--~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~ 754 (1005)
+.||+|++|.||++.+.. .+ ..+|+|.+...... .....+.+|+.++++++||||+++++.+.. ...++||||+
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~ 77 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS--DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELA 77 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH--HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEec
Confidence 468999999999999855 33 36999998875432 566788899999999999999999999988 8899999999
Q ss_pred CCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCc
Q 001847 755 PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPT 834 (1005)
Q Consensus 755 ~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~ 834 (1005)
++++|.+++.......+++..++.++.|++.||.|||++|++|+||||+||+++.++.+||+|||++.........
T Consensus 78 ~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~---- 153 (257)
T cd05040 78 PLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDH---- 153 (257)
T ss_pred CCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccc----
Confidence 9999999997754356899999999999999999999999999999999999999999999999998654321100
Q ss_pred chhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHHHHHHH
Q 001847 835 TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANI 913 (1005)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~Pf~~~~~~~~~~~i 913 (1005)
........++..|+|||++....++.++|||||||++|+|++ |+.||...+..+....+
T Consensus 154 --------------------~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~ 213 (257)
T cd05040 154 --------------------YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKI 213 (257)
T ss_pred --------------------eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 011113457788999999988889999999999999999998 99999888777777766
Q ss_pred HhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHH
Q 001847 914 LHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 956 (1005)
Q Consensus 914 ~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL 956 (1005)
......++.....+..+.+++.+||..+|.+||+ +.+++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~~~ 252 (257)
T cd05040 214 DKEGERLERPEACPQDIYNVMLQCWAHNPADRPT----FAALR 252 (257)
T ss_pred HhcCCcCCCCccCCHHHHHHHHHHCCCCcccCCC----HHHHH
Confidence 6544444444456789999999999999999999 55554
No 304
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.2e-33 Score=316.62 Aligned_cols=259 Identities=21% Similarity=0.298 Sum_probs=206.7
Q ss_pred cccccCCccccccccccCcEEEEEEEEcCC-------CeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceEE
Q 001847 667 EQINLQHFRPIKPLGSGDTGSVHLVELCGS-------GQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALY 738 (1005)
Q Consensus 667 ~~i~~~~y~~~~~LG~G~~g~Vy~a~~~~~-------~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~ 738 (1005)
+.+..++|.+.+.||+|+||.||++.+... ...+|+|.+.... .......+..|+.+++.+ +|+||++++
T Consensus 13 ~~~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~~h~~i~~~~ 90 (307)
T cd05098 13 WEVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLL 90 (307)
T ss_pred ceeehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC--ChHHHHHHHHHHHHHHHhcCCCCEeeEE
Confidence 345567899999999999999999987432 3479999987542 233456788899999999 799999999
Q ss_pred EEEEeCCeEEEEEeccCCCchhhHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCc
Q 001847 739 ASFQTKTHVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 804 (1005)
Q Consensus 739 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~N 804 (1005)
+++...+..|+||||+.+++|.+++.... ...++...+..++.||+.||+|||++|++|+||||+|
T Consensus 91 ~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~N 170 (307)
T cd05098 91 GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARN 170 (307)
T ss_pred EEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHh
Confidence 99999999999999999999999997542 1348889999999999999999999999999999999
Q ss_pred EEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhH
Q 001847 805 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 884 (1005)
Q Consensus 805 ILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDI 884 (1005)
|+++.++.+||+|||.+........ ........+++.|+|||++.+..++.++||
T Consensus 171 ill~~~~~~kL~dfg~a~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv 225 (307)
T cd05098 171 VLVTEDNVMKIADFGLARDIHHIDY-------------------------YKKTTNGRLPVKWMAPEALFDRIYTHQSDV 225 (307)
T ss_pred eEEcCCCcEEECCCcccccccccch-------------------------hhccccCCCccceeChHHhccCCCCcHHHH
Confidence 9999999999999998854321000 000111234568999999988888999999
Q ss_pred HHHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHH
Q 001847 885 WALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGAN 953 (1005)
Q Consensus 885 wSlGvll~eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~ 953 (1005)
|||||++|+|++ |..||.+....+....+... .........+..+.+|+.+||..+|.+||++.++++
T Consensus 226 wslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~ 294 (307)
T cd05098 226 WSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG-HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 294 (307)
T ss_pred HHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHcC-CCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 999999999998 89999877665555544433 333333456889999999999999999999544433
No 305
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=8.4e-34 Score=323.36 Aligned_cols=255 Identities=27% Similarity=0.421 Sum_probs=207.6
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC------
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 744 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------ 744 (1005)
.++|.+.+.||+|+||.||++.+..+++.||+|.+.... ........+.+|+.++++++|+||+++++++...
T Consensus 16 ~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~ 94 (345)
T cd07877 16 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF-QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 94 (345)
T ss_pred cCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcc-hhhHHHHHHHHHHHHHHHcCCCcccceeeeeeeccccccc
Confidence 478999999999999999999999999999999987642 2233345677899999999999999999988643
Q ss_pred CeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCccc
Q 001847 745 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 824 (1005)
Q Consensus 745 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~ 824 (1005)
...|++++++ +++|.+++.. ..+++..++.++.||+.||.|||++||+|+||||+||+++.++.+||+|||++...
T Consensus 95 ~~~~lv~~~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~ 170 (345)
T cd07877 95 NDVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT 170 (345)
T ss_pred ccEEEEehhc-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEecccccccc
Confidence 3578999988 8899888764 34899999999999999999999999999999999999999999999999988532
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001847 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRG 903 (1005)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlGvll~eLltG~~Pf~~ 903 (1005)
.. ......+++.|+|||.+.+ ..++.++|||||||++|+|++|+.||..
T Consensus 171 ~~------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~ 220 (345)
T cd07877 171 DD------------------------------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 220 (345)
T ss_pred cc------------------------------cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 11 1123467889999999866 4678899999999999999999999987
Q ss_pred CChHHHHHHHHhCCC-----------------------CCCC------CCCCCHHHHHHHHHccccCcCccCCChhcHHH
Q 001847 904 KTRQKTFANILHKDL-----------------------KFPS------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 954 (1005)
Q Consensus 904 ~~~~~~~~~i~~~~~-----------------------~~~~------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~e 954 (1005)
......+..+..... ..+. ....+..+.+||.+||+.||.+||+ +.+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t----~~e 296 (345)
T cd07877 221 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT----AAQ 296 (345)
T ss_pred CCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCC----HHH
Confidence 665544443322110 0000 1134678899999999999999999 999
Q ss_pred HHcCCCCCCC
Q 001847 955 IKKHPFFKGV 964 (1005)
Q Consensus 955 lL~hpff~~~ 964 (1005)
++.||||++.
T Consensus 297 ~l~h~~f~~~ 306 (345)
T cd07877 297 ALAHAYFAQY 306 (345)
T ss_pred HhcChhhhhc
Confidence 9999999963
No 306
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=2e-33 Score=308.55 Aligned_cols=253 Identities=23% Similarity=0.294 Sum_probs=202.7
Q ss_pred ccccccccccCcEEEEEEEEcCCCe--EEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEe------CC
Q 001847 674 FRPIKPLGSGDTGSVHLVELCGSGQ--YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT------KT 745 (1005)
Q Consensus 674 y~~~~~LG~G~~g~Vy~a~~~~~~~--~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~------~~ 745 (1005)
|.+.+.||+|+||.||++.+..++. .+|+|.++.. .........+..|+.+++.++|+||+++++++.. ..
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~-~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 79 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIA-ICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYP 79 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccC-cCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCC
Confidence 3567889999999999999877664 6899988754 2344556778889999999999999999987642 23
Q ss_pred eEEEEEeccCCCchhhHHhhC----CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCC
Q 001847 746 HVCLITDYCPGGELFLLLDRQ----PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 821 (1005)
Q Consensus 746 ~~~lV~E~~~ggsL~~~l~~~----~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a 821 (1005)
..+++|||+.+++|.+++... ....+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||++
T Consensus 80 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 159 (272)
T cd05075 80 SPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLS 159 (272)
T ss_pred CcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCcc
Confidence 578999999999999887421 2234889999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCC
Q 001847 822 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTP 900 (1005)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~P 900 (1005)
........ ........+++.|++||.+.+..++.++|||||||++|+|++ |..|
T Consensus 160 ~~~~~~~~-------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p 214 (272)
T cd05075 160 KKIYNGDY-------------------------YRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTP 214 (272)
T ss_pred cccCcccc-------------------------eecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCC
Confidence 65421100 001122346778999999998889999999999999999998 8999
Q ss_pred CCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHc
Q 001847 901 FRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 957 (1005)
Q Consensus 901 f~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 957 (1005)
|.+.........+..+.. .+.....+..+.++|.+||..+|++||+ +.++++
T Consensus 215 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~l~~ 266 (272)
T cd05075 215 YPGVENSEIYDYLRQGNR-LKQPPDCLDGLYSLMSSCWLLNPKDRPS----FETLRC 266 (272)
T ss_pred CCCCCHHHHHHHHHcCCC-CCCCCCCCHHHHHHHHHHcCCCcccCcC----HHHHHH
Confidence 988777766666655433 2233456788999999999999999999 555553
No 307
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=2.2e-33 Score=309.92 Aligned_cols=254 Identities=21% Similarity=0.316 Sum_probs=205.9
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCe----EEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 001847 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQ----YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 744 (1005)
Q Consensus 669 i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~----~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 744 (1005)
+...+|++++.||.|+||.||+|.+..++. .||+|.+.... .......+.+|+.+++.+.|+||+.+++++..
T Consensus 4 l~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~- 80 (279)
T cd05109 4 LKETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT--SPKANKEILDEAYVMAGVGSPYVCRLLGICLT- 80 (279)
T ss_pred cchhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC--CHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-
Confidence 456789999999999999999999877765 48999887542 34445678889999999999999999998875
Q ss_pred CeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCccc
Q 001847 745 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 824 (1005)
Q Consensus 745 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~ 824 (1005)
...+++|+|+++|+|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||+++++.+||+|||++...
T Consensus 81 ~~~~l~~~~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~ 159 (279)
T cd05109 81 STVQLVTQLMPYGCLLDYVRENK-DRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLL 159 (279)
T ss_pred CCcEEEEEcCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeec
Confidence 45789999999999999987542 45899999999999999999999999999999999999999999999999998654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCC
Q 001847 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 903 (1005)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~Pf~~ 903 (1005)
...... .......+++.|+|||.+.+..++.++|||||||++|+|++ |..||..
T Consensus 160 ~~~~~~-------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~ 214 (279)
T cd05109 160 DIDETE-------------------------YHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDG 214 (279)
T ss_pred ccccce-------------------------eecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCC
Confidence 311110 00111235678999999988889999999999999999998 9999987
Q ss_pred CChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHH
Q 001847 904 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 956 (1005)
Q Consensus 904 ~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL 956 (1005)
.........+ ......+.....+..+.+++.+||..||++||+ +.+++
T Consensus 215 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~----~~~l~ 262 (279)
T cd05109 215 IPAREIPDLL-EKGERLPQPPICTIDVYMIMVKCWMIDSECRPR----FRELV 262 (279)
T ss_pred CCHHHHHHHH-HCCCcCCCCccCCHHHHHHHHHHcCCChhhCcC----HHHHH
Confidence 6665544433 333333444557889999999999999999999 55555
No 308
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=1.8e-33 Score=313.64 Aligned_cols=249 Identities=22% Similarity=0.308 Sum_probs=203.2
Q ss_pred CCccccccccccCcEEEEEEEEcCCCe--EEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQ--YFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVC 748 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~--~valK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~ 748 (1005)
++|++.+.||.|+||.||++.+..++. .+++|.++.. ........+.+|+.++.++ +||||+++++++...+.+|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 79 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEF--ASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLY 79 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEcccc--CCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcce
Confidence 479999999999999999999877664 4688877632 2334456788899999999 7999999999999999999
Q ss_pred EEEeccCCCchhhHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEE
Q 001847 749 LITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVS 814 (1005)
Q Consensus 749 lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vk 814 (1005)
+||||+++++|.+++.... ...++...++.++.||+.||+|||++||+||||||+|||++.++.+|
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~k 159 (297)
T cd05089 80 IAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASK 159 (297)
T ss_pred EEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEE
Confidence 9999999999999986532 13488899999999999999999999999999999999999999999
Q ss_pred EEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHH
Q 001847 815 LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEM 894 (1005)
Q Consensus 815 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eL 894 (1005)
|+|||++...... ........+..|+|||++....++.++|||||||++|+|
T Consensus 160 l~dfg~~~~~~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el 211 (297)
T cd05089 160 IADFGLSRGEEVY----------------------------VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEI 211 (297)
T ss_pred ECCcCCCccccce----------------------------eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHH
Confidence 9999987421100 000111234579999999888889999999999999999
Q ss_pred Hc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhc
Q 001847 895 LY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 951 (1005)
Q Consensus 895 lt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~ 951 (1005)
++ |..||.+.........+..+ ...+....++..+.+|+.+||..+|.+||++.++
T Consensus 212 ~t~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i 268 (297)
T cd05089 212 VSLGGTPYCGMTCAELYEKLPQG-YRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQI 268 (297)
T ss_pred HcCCCCCCCCCCHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 97 99999888777766666544 2223334578899999999999999999994443
No 309
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=2.3e-33 Score=306.40 Aligned_cols=250 Identities=22% Similarity=0.329 Sum_probs=206.2
Q ss_pred ccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001847 668 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 747 (1005)
Q Consensus 668 ~i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 747 (1005)
.+..++|++.+.||+|+||.||++.+. .+..+++|.+... ......+.+|+.+++.++|+||+++++++.. ...
T Consensus 2 ~~~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~ 75 (260)
T cd05073 2 EIPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPG----SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPI 75 (260)
T ss_pred cccccceeEEeEecCccceEEEEEEec-CCccEEEEecCCC----hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCe
Confidence 456789999999999999999999864 4567999987653 2234678889999999999999999999887 778
Q ss_pred EEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001847 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (1005)
Q Consensus 748 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 827 (1005)
+++|||+++++|.+++.......++...+..++.||+.||.|||+.|++|+||||+||+++.++.+||+|||.+......
T Consensus 76 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 155 (260)
T cd05073 76 YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDN 155 (260)
T ss_pred EEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCC
Confidence 99999999999999998765566889999999999999999999999999999999999999999999999988543211
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCh
Q 001847 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 906 (1005)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~Pf~~~~~ 906 (1005)
.. .......++..|+|||++....++.++|+|||||++|++++ |..||.+.+.
T Consensus 156 ~~--------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~ 209 (260)
T cd05073 156 EY--------------------------TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN 209 (260)
T ss_pred Cc--------------------------ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCH
Confidence 00 00112235677999999988888899999999999999998 9999988776
Q ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChh
Q 001847 907 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 950 (1005)
Q Consensus 907 ~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~ 950 (1005)
......+... ...+.....+..+.+++.+||+.+|++||++.+
T Consensus 210 ~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ 252 (260)
T cd05073 210 PEVIRALERG-YRMPRPENCPEELYNIMMRCWKNRPEERPTFEY 252 (260)
T ss_pred HHHHHHHhCC-CCCCCcccCCHHHHHHHHHHcccCcccCcCHHH
Confidence 6655554433 333444557789999999999999999999443
No 310
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=7.7e-34 Score=323.32 Aligned_cols=256 Identities=30% Similarity=0.474 Sum_probs=207.5
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC------C
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------T 745 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------~ 745 (1005)
++|.+.+.||.|+||.||+|.+..++..||+|.+..... .......+.+|+.+++.++||||+++++++... .
T Consensus 15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQ-SEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccc-cccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 689999999999999999999988999999999875422 222345677899999999999999999998754 3
Q ss_pred eEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 001847 746 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 825 (1005)
Q Consensus 746 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~ 825 (1005)
..|+||||+. .+|..++. ..+++..+..++.|++.||.|||+.|++||||||+||+++.++.++|+|||++....
T Consensus 94 ~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~ 168 (342)
T cd07879 94 DFYLVMPYMQ-TDLQKIMG----HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHAD 168 (342)
T ss_pred eEEEEecccc-cCHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCC
Confidence 4699999994 57766652 248999999999999999999999999999999999999999999999999884321
Q ss_pred CCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001847 826 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGK 904 (1005)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlGvll~eLltG~~Pf~~~ 904 (1005)
. ......+++.|+|||.+.+ ..++.++|||||||++|+|++|+.||.+.
T Consensus 169 ~------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~ 218 (342)
T cd07879 169 A------------------------------EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK 218 (342)
T ss_pred C------------------------------CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCC
Confidence 1 1123467889999999876 45788999999999999999999999887
Q ss_pred ChHHHHHHHHhCC-----------------------CCCCC------CCCCCHHHHHHHHHccccCcCccCCChhcHHHH
Q 001847 905 TRQKTFANILHKD-----------------------LKFPS------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 955 (1005)
Q Consensus 905 ~~~~~~~~i~~~~-----------------------~~~~~------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~el 955 (1005)
+....+..+.... ...+. ....+..+.+||.+||+.||.+||+ +.++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~----~~e~ 294 (342)
T cd07879 219 DYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLT----ATEA 294 (342)
T ss_pred CHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcC----HHHH
Confidence 6555444433210 00000 1235677899999999999999999 9999
Q ss_pred HcCCCCCCCChh
Q 001847 956 KKHPFFKGVNWA 967 (1005)
Q Consensus 956 L~hpff~~~~~~ 967 (1005)
+.||||+.+...
T Consensus 295 l~h~~f~~~~~~ 306 (342)
T cd07879 295 LEHPYFDSFRDA 306 (342)
T ss_pred hcCcchhhcccc
Confidence 999999998654
No 311
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=1.8e-33 Score=325.39 Aligned_cols=258 Identities=22% Similarity=0.290 Sum_probs=208.3
Q ss_pred cccccCCccccccccccCcEEEEEEEEc-----CCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-CCCcceEEEE
Q 001847 667 EQINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYAS 740 (1005)
Q Consensus 667 ~~i~~~~y~~~~~LG~G~~g~Vy~a~~~-----~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~ 740 (1005)
+.+..++|.+.+.||+|+||.||+|.+. .+++.||+|++.... .......+.+|+.++.++. ||||++++++
T Consensus 32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~E~~~l~~l~~H~niv~~~~~ 109 (401)
T cd05107 32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTA--RSSEKQALMSELKIMSHLGPHLNIVNLLGA 109 (401)
T ss_pred ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCC--ChhHHHHHHHHHHHHHhcCCCCCeEEEEEE
Confidence 4566778999999999999999999963 345789999997542 2233456788999999997 9999999999
Q ss_pred EEeCCeEEEEEeccCCCchhhHHhhCCC----------------------------------------------------
Q 001847 741 FQTKTHVCLITDYCPGGELFLLLDRQPT---------------------------------------------------- 768 (1005)
Q Consensus 741 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~---------------------------------------------------- 768 (1005)
+...+.+|+||||+.+|+|.+++.....
T Consensus 110 ~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (401)
T cd05107 110 CTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADY 189 (401)
T ss_pred EccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCc
Confidence 9999999999999999999999864321
Q ss_pred --------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCc
Q 001847 769 --------------------------------------------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 804 (1005)
Q Consensus 769 --------------------------------------------~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~N 804 (1005)
..++...+..++.||+.||.|||+.||+||||||+|
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~N 269 (401)
T cd05107 190 VPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARN 269 (401)
T ss_pred cchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcce
Confidence 236777889999999999999999999999999999
Q ss_pred EEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhH
Q 001847 805 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 884 (1005)
Q Consensus 805 ILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDI 884 (1005)
||++.++.+||+|||++........ ........+++.|+|||.+....++.++||
T Consensus 270 iLl~~~~~~kL~DfGla~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv 324 (401)
T cd05107 270 VLICEGKLVKICDFGLARDIMRDSN-------------------------YISKGSTFLPLKWMAPESIFNNLYTTLSDV 324 (401)
T ss_pred EEEeCCCEEEEEecCcceecccccc-------------------------cccCCCcCCCCceeChHHhcCCCCCcHhHH
Confidence 9999999999999999854321100 001123357889999999988888999999
Q ss_pred HHHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhc
Q 001847 885 WALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 951 (1005)
Q Consensus 885 wSlGvll~eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~ 951 (1005)
|||||++|+|++ |..||......+.....+......+.....+.++.+|+.+||..+|.+||++.++
T Consensus 325 wslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~el 392 (401)
T cd05107 325 WSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQL 392 (401)
T ss_pred HHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence 999999999997 8999987666555555555444433444568899999999999999999994433
No 312
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=1.9e-33 Score=319.14 Aligned_cols=274 Identities=25% Similarity=0.335 Sum_probs=212.4
Q ss_pred CCccc-cccccccCcEEEEEEEEcCCCeEEEEEEeecccccChH-----------HHHHHHHHHHHHHhCCCCCcceEEE
Q 001847 672 QHFRP-IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN-----------KVHRACAEREILDMLDHPFVPALYA 739 (1005)
Q Consensus 672 ~~y~~-~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~-----------~~~~~~~E~~il~~l~hpnIv~l~~ 739 (1005)
++|.. .+.||.|+||.||++.+..+++.||+|.++........ ....+.+|+.+++.++|+||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 56765 47799999999999999999999999998754322100 1124678999999999999999999
Q ss_pred EEEeCCeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEecc
Q 001847 740 SFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFD 819 (1005)
Q Consensus 740 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG 819 (1005)
++...+..|+||||+. ++|.+++... ..+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg 164 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDRK--IRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFG 164 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCcc
Confidence 9999999999999995 6899988653 458999999999999999999999999999999999999999999999999
Q ss_pred CCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCC
Q 001847 820 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGY 898 (1005)
Q Consensus 820 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlGvll~eLltG~ 898 (1005)
++............... . ............+++.|+|||.+.+. .++.++|||||||++|+|++|.
T Consensus 165 ~~~~~~~~~~~~~~~~~---------~----~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~ 231 (335)
T PTZ00024 165 LARRYGYPPYSDTLSKD---------E----TMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGK 231 (335)
T ss_pred ceeeccccccccccccc---------c----cccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 98654322111000000 0 00001111234578899999998764 4688999999999999999999
Q ss_pred CCCCCCChHHHHHHHHhCC--C---CCCC---------------------CCCCCHHHHHHHHHccccCcCccCCChhcH
Q 001847 899 TPFRGKTRQKTFANILHKD--L---KFPS---------------------STPTSLHAKQLMYRLLHRDPKSRLGSHEGA 952 (1005)
Q Consensus 899 ~Pf~~~~~~~~~~~i~~~~--~---~~~~---------------------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a 952 (1005)
.||.+.+....+..+.... . .++. ....+..+.+||.+||..+|++||+ +
T Consensus 232 ~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s----~ 307 (335)
T PTZ00024 232 PLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERIS----A 307 (335)
T ss_pred CCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccC----H
Confidence 9999887766665554310 0 0000 1234677899999999999999999 9
Q ss_pred HHHHcCCCCCCCC
Q 001847 953 NEIKKHPFFKGVN 965 (1005)
Q Consensus 953 ~elL~hpff~~~~ 965 (1005)
.++|.||||+...
T Consensus 308 ~~~l~~~~~~~~~ 320 (335)
T PTZ00024 308 KEALKHEYFKSDP 320 (335)
T ss_pred HHHhcCcccCCCC
Confidence 9999999999753
No 313
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=2.5e-33 Score=317.73 Aligned_cols=261 Identities=25% Similarity=0.381 Sum_probs=205.8
Q ss_pred CccccccccccCcEEEEEEEEcCC--CeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceEEEEEEe----CC
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGS--GQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQT----KT 745 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~--~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~----~~ 745 (1005)
+|++.+.||+|+||.||++.+..+ +..||+|.+.... ........+.+|+.+++++ +||||+++++.+.. ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVF-SKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEecccc-ccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCC
Confidence 488999999999999999999888 8899999987532 2233456677899999999 69999999987543 24
Q ss_pred eEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 001847 746 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 825 (1005)
Q Consensus 746 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~ 825 (1005)
.+|++|+|+ +++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||++....
T Consensus 80 ~~~~~~e~~-~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~ 156 (332)
T cd07857 80 ELYLYEELM-EADLHQIIRSG--QPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFS 156 (332)
T ss_pred cEEEEEecc-cCCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceecc
Confidence 688999999 57898888653 458999999999999999999999999999999999999999999999999986432
Q ss_pred CCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001847 826 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGK 904 (1005)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlGvll~eLltG~~Pf~~~ 904 (1005)
..... .........|++.|+|||++.+ ..++.++|||||||++|+|++|..||.+.
T Consensus 157 ~~~~~-----------------------~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~ 213 (332)
T cd07857 157 ENPGE-----------------------NAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGK 213 (332)
T ss_pred ccccc-----------------------ccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCC
Confidence 11100 0011223578999999998765 46788999999999999999999999876
Q ss_pred ChHHHHHHHHhC----------------------------CCCCC-CCCCCCHHHHHHHHHccccCcCccCCChhcHHHH
Q 001847 905 TRQKTFANILHK----------------------------DLKFP-SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 955 (1005)
Q Consensus 905 ~~~~~~~~i~~~----------------------------~~~~~-~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~el 955 (1005)
+....+..++.. ...+. .....+..+.+|+.+||+.||.+||+ +.++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t----~~~l 289 (332)
T cd07857 214 DYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRIS----VEEA 289 (332)
T ss_pred CHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCC----HHHH
Confidence 544433332211 00001 11235778999999999999999999 9999
Q ss_pred HcCCCCCCC
Q 001847 956 KKHPFFKGV 964 (1005)
Q Consensus 956 L~hpff~~~ 964 (1005)
+.||||+.+
T Consensus 290 l~~~~~~~~ 298 (332)
T cd07857 290 LEHPYLAIW 298 (332)
T ss_pred hcChhhhhh
Confidence 999999753
No 314
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=2.4e-33 Score=317.27 Aligned_cols=254 Identities=27% Similarity=0.447 Sum_probs=206.6
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEe-CCeEEE
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT-KTHVCL 749 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~~l 749 (1005)
.++|++++.||.|+||.||++.+..+++.||+|.+.+.. ........+..|+.+++.++||||++++++|.. ....|+
T Consensus 9 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~l 87 (328)
T cd07856 9 TNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPF-STPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYF 87 (328)
T ss_pred ccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccc-cccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEE
Confidence 468999999999999999999999999999999886542 223344667789999999999999999999865 567899
Q ss_pred EEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 001847 750 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 829 (1005)
Q Consensus 750 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~ 829 (1005)
||||+ +++|..++.. ..++...+..++.||+.||.|||++||+|+||+|+||+++.++.++|+|||.+.....
T Consensus 88 v~e~~-~~~L~~~~~~---~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~--- 160 (328)
T cd07856 88 VTELL-GTDLHRLLTS---RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDP--- 160 (328)
T ss_pred Eeehh-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCC---
Confidence 99999 7789888764 3478889999999999999999999999999999999999999999999998743210
Q ss_pred CCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001847 830 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 908 (1005)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~ 908 (1005)
......+++.|+|||.+.+ ..++.++|||||||++|+|++|+.||.+.....
T Consensus 161 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~ 213 (328)
T cd07856 161 ---------------------------QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVN 213 (328)
T ss_pred ---------------------------CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 0122357889999998765 567889999999999999999999998765533
Q ss_pred HHHHHHhC--------------------------CCCCC---CCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCC
Q 001847 909 TFANILHK--------------------------DLKFP---SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHP 959 (1005)
Q Consensus 909 ~~~~i~~~--------------------------~~~~~---~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hp 959 (1005)
....+... ....+ ....++..+.++|.+||+.+|++||+ +.+++.||
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t----~~ell~~~ 289 (328)
T cd07856 214 QFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRIS----AAEALAHP 289 (328)
T ss_pred HHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCC----HHHHhcCC
Confidence 22221110 00011 01235678999999999999999999 99999999
Q ss_pred CCCC
Q 001847 960 FFKG 963 (1005)
Q Consensus 960 ff~~ 963 (1005)
||..
T Consensus 290 ~~~~ 293 (328)
T cd07856 290 YLAP 293 (328)
T ss_pred cccc
Confidence 9985
No 315
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=8e-34 Score=310.13 Aligned_cols=250 Identities=30% Similarity=0.448 Sum_probs=202.2
Q ss_pred cccccccccCcEEEEEEEEc----CCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001847 675 RPIKPLGSGDTGSVHLVELC----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 750 (1005)
Q Consensus 675 ~~~~~LG~G~~g~Vy~a~~~----~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 750 (1005)
.+.+.||.|.||.||+|.+. ..+..|+||.+... ........+.+|++++++++||||+++++++...+..++|
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~--~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv 79 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPS--SSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLV 79 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTT--SSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccc--cccccceeeeeccccccccccccccccccccccccccccc
Confidence 35678999999999999997 34678999999542 2344578899999999999999999999999988889999
Q ss_pred EeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001847 751 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (1005)
Q Consensus 751 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 830 (1005)
|||+++|+|.+++.......++...+..|+.||+.||.|||+++++|++|+|+||++++++.+||+|||++........
T Consensus 80 ~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~- 158 (259)
T PF07714_consen 80 MEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK- 158 (259)
T ss_dssp EE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS-
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-
Confidence 9999999999999886456699999999999999999999999999999999999999999999999999855421100
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHHH
Q 001847 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKT 909 (1005)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~Pf~~~~~~~~ 909 (1005)
........+...|+|||.+....++.++||||||+++|||++ |+.||...+..+.
T Consensus 159 ------------------------~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~ 214 (259)
T PF07714_consen 159 ------------------------YKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEI 214 (259)
T ss_dssp ------------------------EEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHH
T ss_pred ------------------------cccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 011223356778999999988889999999999999999999 7899998888887
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHH
Q 001847 910 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 956 (1005)
Q Consensus 910 ~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL 956 (1005)
...+.... ..+....++..+.++|..||..+|++||+ +.+++
T Consensus 215 ~~~~~~~~-~~~~~~~~~~~~~~li~~C~~~~p~~RPs----~~~i~ 256 (259)
T PF07714_consen 215 IEKLKQGQ-RLPIPDNCPKDIYSLIQQCWSHDPEKRPS----FQEIL 256 (259)
T ss_dssp HHHHHTTE-ETTSBTTSBHHHHHHHHHHT-SSGGGS------HHHHH
T ss_pred cccccccc-cceeccchhHHHHHHHHHHcCCChhhCcC----HHHHH
Confidence 77774443 33334457889999999999999999999 55554
No 316
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=1.7e-33 Score=313.58 Aligned_cols=253 Identities=24% Similarity=0.341 Sum_probs=202.3
Q ss_pred cCCccccccccccCcEEEEEEEEcCC--------------CeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcce
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGS--------------GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPA 736 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~--------------~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~ 736 (1005)
.++|++.+.||+|+||.||+|.+..+ ...||+|.++... .......+.+|++++++++|+||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~ei~~l~~l~h~~i~~ 81 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV--TKTARNDFLKEIKIMSRLKNPNIIR 81 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC--CHHHHHHHHHHHHHHHhCCCCCcCe
Confidence 46899999999999999999987543 2358999987542 2344567889999999999999999
Q ss_pred EEEEEEeCCeEEEEEeccCCCchhhHHhhCC----------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEE
Q 001847 737 LYASFQTKTHVCLITDYCPGGELFLLLDRQP----------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVL 806 (1005)
Q Consensus 737 l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~----------~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NIL 806 (1005)
+++++...+..|+||||+.+++|.+++.... ...++...+..++.||+.||.|||++|++|+||||+||+
T Consensus 82 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil 161 (295)
T cd05097 82 LLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCL 161 (295)
T ss_pred EEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEE
Confidence 9999999999999999999999999986431 123678899999999999999999999999999999999
Q ss_pred EecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHH
Q 001847 807 LQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWA 886 (1005)
Q Consensus 807 i~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwS 886 (1005)
++.++.+||+|||++....... .........+++.|+|||++....++.++||||
T Consensus 162 l~~~~~~kl~dfg~~~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwS 216 (295)
T cd05097 162 VGNHYTIKIADFGMSRNLYSGD-------------------------YYRIQGRAVLPIRWMAWESILLGKFTTASDVWA 216 (295)
T ss_pred EcCCCcEEecccccccccccCc-------------------------ceeccCcCcCceeecChhhhccCCcCchhhHHH
Confidence 9999999999999885432110 001112234577899999998888999999999
Q ss_pred HHHHHHHHHc--CCCCCCCCChHHHHHHHHh------CCCCCCCCCCCCHHHHHHHHHccccCcCccCCChh
Q 001847 887 LGILLYEMLY--GYTPFRGKTRQKTFANILH------KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 950 (1005)
Q Consensus 887 lGvll~eLlt--G~~Pf~~~~~~~~~~~i~~------~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~ 950 (1005)
|||++|+|++ |..||...........+.. ...........+..+.+|+.+||..+|++||++.+
T Consensus 217 lG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~ 288 (295)
T cd05097 217 FGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNK 288 (295)
T ss_pred HHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHH
Confidence 9999999987 7789987766655544432 11112223346788999999999999999999444
No 317
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.3e-33 Score=313.88 Aligned_cols=256 Identities=21% Similarity=0.306 Sum_probs=207.5
Q ss_pred ccccCCccccccccccCcEEEEEEEEc-------CCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceEEE
Q 001847 668 QINLQHFRPIKPLGSGDTGSVHLVELC-------GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYA 739 (1005)
Q Consensus 668 ~i~~~~y~~~~~LG~G~~g~Vy~a~~~-------~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~ 739 (1005)
.+..++|.+.+.||+|+||.||++.+. ..+..+|+|.+.... .......+.+|+.+++.+ +||||+++++
T Consensus 11 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~ 88 (304)
T cd05101 11 EFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLG 88 (304)
T ss_pred cccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc--chHHHHHHHHHHHHHHhhccCCCchheeE
Confidence 355678999999999999999999753 234579999887532 234456788999999999 8999999999
Q ss_pred EEEeCCeEEEEEeccCCCchhhHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcE
Q 001847 740 SFQTKTHVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 805 (1005)
Q Consensus 740 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NI 805 (1005)
++...+.+|+||||+.+++|.+++.... ...++...+..++.||+.||.|||++|++|+||||+||
T Consensus 89 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Ni 168 (304)
T cd05101 89 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNV 168 (304)
T ss_pred EEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceE
Confidence 9999999999999999999999987532 13477888999999999999999999999999999999
Q ss_pred EEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHH
Q 001847 806 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 885 (1005)
Q Consensus 806 Li~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIw 885 (1005)
+++.++.+||+|||++........ ........+++.|+|||++.+..++.++|||
T Consensus 169 li~~~~~~kl~D~g~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~ 223 (304)
T cd05101 169 LVTENNVMKIADFGLARDVNNIDY-------------------------YKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 223 (304)
T ss_pred EEcCCCcEEECCCccceecccccc-------------------------cccccCCCCCceeeCchhhccCCCCchhhHH
Confidence 999999999999999865421110 0011123456789999999888889999999
Q ss_pred HHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhc
Q 001847 886 ALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 951 (1005)
Q Consensus 886 SlGvll~eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~ 951 (1005)
|||+++|+|++ |..||.+....+....+.... .......++..+.+|+.+||..+|.+||++.++
T Consensus 224 slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~ 289 (304)
T cd05101 224 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH-RMDKPANCTNELYMMMRDCWHAIPSHRPTFKQL 289 (304)
T ss_pred HHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCC-cCCCCCCCCHHHHHHHHHHcccChhhCCCHHHH
Confidence 99999999998 889998877766666554432 223334578899999999999999999994443
No 318
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=2e-33 Score=309.23 Aligned_cols=256 Identities=21% Similarity=0.315 Sum_probs=213.6
Q ss_pred cCCccccccccccCcEEEEEEEEcC-----CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 745 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~-----~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 745 (1005)
..+|++++.||.|+||.||++..+. +.+.+++|.+.... .......+.+|+.++++++|+||+++++++...+
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 81 (275)
T cd05046 4 RSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK--DENLQSEFRRELDMFRKLSHKNVVRLLGLCREAE 81 (275)
T ss_pred hHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc--chHHHHHHHHHHHHHHhcCCcceeeeEEEECCCC
Confidence 4689999999999999999999754 34679999876431 2234567889999999999999999999999989
Q ss_pred eEEEEEeccCCCchhhHHhhCCC-------CCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEec
Q 001847 746 HVCLITDYCPGGELFLLLDRQPT-------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDF 818 (1005)
Q Consensus 746 ~~~lV~E~~~ggsL~~~l~~~~~-------~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DF 818 (1005)
..|+||||+++++|.+++..... ..+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+||
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 82 PHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred cceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEccc
Confidence 99999999999999999976431 15899999999999999999999999999999999999999999999999
Q ss_pred cCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-C
Q 001847 819 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-G 897 (1005)
Q Consensus 819 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G 897 (1005)
|++....... ........+++.|+|||.+.+...+.++||||||+++|+|++ |
T Consensus 162 ~~~~~~~~~~--------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~ 215 (275)
T cd05046 162 SLSKDVYNSE--------------------------YYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQG 215 (275)
T ss_pred ccccccCccc--------------------------ccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCC
Confidence 9874321110 011123356778999999988888899999999999999998 8
Q ss_pred CCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcC
Q 001847 898 YTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 958 (1005)
Q Consensus 898 ~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~h 958 (1005)
..||.+.........+..+...++....++..+.+++.+||+.+|.+||+ +.+++.+
T Consensus 216 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~----~~~~l~~ 272 (275)
T cd05046 216 ELPFYGLSDEEVLNRLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPS----FSELVSA 272 (275)
T ss_pred CCCccccchHHHHHHHHcCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCC----HHHHHHH
Confidence 89998877777777776666666666668889999999999999999999 7777653
No 319
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=2.4e-33 Score=311.02 Aligned_cols=253 Identities=21% Similarity=0.303 Sum_probs=206.8
Q ss_pred ccCCccccccccccCcEEEEEEEEcC-----CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 001847 670 NLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 744 (1005)
Q Consensus 670 ~~~~y~~~~~LG~G~~g~Vy~a~~~~-----~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 744 (1005)
..++|++++.||.|+||.||+|.+.. ++..+|+|.+.... .......+.+|+.+++.++||||+++++++...
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~ 80 (288)
T cd05050 3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFDHPNIVKLLGVCAVG 80 (288)
T ss_pred ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc--CHHHHHHHHHHHHHHHhcCCCchheEEEEEcCC
Confidence 45689999999999999999999753 57899999987542 234456788899999999999999999999999
Q ss_pred CeEEEEEeccCCCchhhHHhhCC--------------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCc
Q 001847 745 THVCLITDYCPGGELFLLLDRQP--------------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 804 (1005)
Q Consensus 745 ~~~~lV~E~~~ggsL~~~l~~~~--------------------~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~N 804 (1005)
...|+||||+++++|.+++.... ...+++..+..++.||+.||.|||++|++||||||+|
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~n 160 (288)
T cd05050 81 KPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRN 160 (288)
T ss_pred CccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhh
Confidence 99999999999999999986421 1247888899999999999999999999999999999
Q ss_pred EEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhH
Q 001847 805 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 884 (1005)
Q Consensus 805 ILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDI 884 (1005)
|+++.++.++|+|||++........ ........+++.|+|||.+.+..++.++||
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv 215 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADY-------------------------YKASENDAIPIRWMPPESIFYNRYTTESDV 215 (288)
T ss_pred eEecCCCceEECccccceecccCcc-------------------------ccccCCCccChhhcCHHHHhcCCCCchhHH
Confidence 9999999999999998754321100 011112234667999999988889999999
Q ss_pred HHHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChh
Q 001847 885 WALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 950 (1005)
Q Consensus 885 wSlGvll~eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~ 950 (1005)
|||||++|+|++ |..||.+....+....+..+... +.....+..+.+|+.+||+.+|++||++.+
T Consensus 216 ~slG~il~el~~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rpt~~e 281 (288)
T cd05050 216 WAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRDGNVL-SCPDNCPLELYNLMRLCWSKLPSDRPSFAS 281 (288)
T ss_pred HHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCC-CCCCCCCHHHHHHHHHHcccCcccCCCHHH
Confidence 999999999997 88999888777766666555432 223346788999999999999999999444
No 320
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=1.1e-33 Score=312.25 Aligned_cols=254 Identities=28% Similarity=0.499 Sum_probs=210.1
Q ss_pred ccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEec
Q 001847 674 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 753 (1005)
Q Consensus 674 y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~ 753 (1005)
|++++.||.|++|.||++.+..+++.+++|.+..... .......+.+|+.++++++|+||+++++++..++.+|+||||
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 79 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFE-SEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEF 79 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccc-cchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEec
Confidence 6788999999999999999988999999999876532 223456778899999999999999999999999999999999
Q ss_pred cCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCC
Q 001847 754 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 833 (1005)
Q Consensus 754 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~ 833 (1005)
+. ++|.+++.... ..+++..+..++.||+.||.|||+.||+|+||||+||+++.++.++|+|||.+.......
T Consensus 80 ~~-~~l~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~----- 152 (283)
T cd05118 80 MD-TDLYKLIKDRQ-RGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV----- 152 (283)
T ss_pred cC-CCHHHHHHhhc-ccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc-----
Confidence 95 58888876642 468999999999999999999999999999999999999999999999999885432111
Q ss_pred cchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001847 834 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 912 (1005)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~~ 912 (1005)
.......++..|+|||.+.+. ..+.++||||||+++|+|++|+.||.+.+..+.+..
T Consensus 153 ----------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~ 210 (283)
T cd05118 153 ----------------------RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFK 210 (283)
T ss_pred ----------------------ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 011223578899999998776 678899999999999999999999988776655544
Q ss_pred HHhCC-------------------CCCCC---------CCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCC
Q 001847 913 ILHKD-------------------LKFPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 961 (1005)
Q Consensus 913 i~~~~-------------------~~~~~---------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff 961 (1005)
+...- ..++. ....+..+.+||.+||..||.+||+ +.+++.||||
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~----~~~ll~~~~~ 283 (283)
T cd05118 211 IFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRIT----AEQALAHPYF 283 (283)
T ss_pred HHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcC----HHHHhhCCCC
Confidence 43210 00000 1235678999999999999999999 9999999997
No 321
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=1.7e-33 Score=320.56 Aligned_cols=259 Identities=25% Similarity=0.373 Sum_probs=203.4
Q ss_pred cccCCccccccccccCcEEEEEEEE-----cCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceEEEEEE
Q 001847 669 INLQHFRPIKPLGSGDTGSVHLVEL-----CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQ 742 (1005)
Q Consensus 669 i~~~~y~~~~~LG~G~~g~Vy~a~~-----~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~ 742 (1005)
+..++|++.+.||.|+||.||+|.+ ..+++.||||.++... .......+.+|+.++..+ +|+||+++++++.
T Consensus 4 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~ 81 (343)
T cd05103 4 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACT 81 (343)
T ss_pred cchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCC--ChHHHHHHHHHHHHHHhccCCccHhhhcceee
Confidence 3456899999999999999999985 3457899999987542 233456788899999999 6899999999876
Q ss_pred e-CCeEEEEEeccCCCchhhHHhhCC------------------------------------------------------
Q 001847 743 T-KTHVCLITDYCPGGELFLLLDRQP------------------------------------------------------ 767 (1005)
Q Consensus 743 ~-~~~~~lV~E~~~ggsL~~~l~~~~------------------------------------------------------ 767 (1005)
. ...+++||||+.+|+|.+++....
T Consensus 82 ~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (343)
T cd05103 82 KPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDV 161 (343)
T ss_pred cCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccc
Confidence 4 456899999999999999986421
Q ss_pred -----------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 001847 768 -----------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 836 (1005)
Q Consensus 768 -----------~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 836 (1005)
...++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~------ 235 (343)
T cd05103 162 EEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY------ 235 (343)
T ss_pred hhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcch------
Confidence 123677888999999999999999999999999999999999999999999998543211100
Q ss_pred hhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHHHHHHHHh
Q 001847 837 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILH 915 (1005)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~Pf~~~~~~~~~~~i~~ 915 (1005)
.......+++.|+|||.+.+..++.++|||||||++|+|++ |..||.+..........+.
T Consensus 236 -------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~ 296 (343)
T cd05103 236 -------------------VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 296 (343)
T ss_pred -------------------hhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHh
Confidence 01112235678999999988888999999999999999996 9999987654333333333
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcC
Q 001847 916 KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 958 (1005)
Q Consensus 916 ~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~h 958 (1005)
.....+.....+..+.+++..||+.+|++||+ +.++++|
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rps----~~eil~~ 335 (343)
T cd05103 297 EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPT----FSELVEH 335 (343)
T ss_pred ccCCCCCCCCCCHHHHHHHHHHccCChhhCcC----HHHHHHH
Confidence 33333333346778999999999999999999 7777654
No 322
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=3.7e-33 Score=304.06 Aligned_cols=246 Identities=22% Similarity=0.325 Sum_probs=199.3
Q ss_pred ccccccCcEEEEEEEEcCCC---eEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEecc
Q 001847 678 KPLGSGDTGSVHLVELCGSG---QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYC 754 (1005)
Q Consensus 678 ~~LG~G~~g~Vy~a~~~~~~---~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~ 754 (1005)
+.||+|+||.||+|.+..++ ..+|+|.+...... .....+.+|+.+++.++|+||+++++++. ....++||||+
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~ 77 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA--AGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELA 77 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeC
Confidence 46899999999999875554 78999998765332 44567888999999999999999999876 45689999999
Q ss_pred CCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCc
Q 001847 755 PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPT 834 (1005)
Q Consensus 755 ~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~ 834 (1005)
.+++|.+++.... .+++..+..++.|++.+|.|||..|++|+||||+|||++.++.+||+|||++.........
T Consensus 78 ~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~---- 151 (257)
T cd05060 78 PLGPLLKYLKKRR--EIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDY---- 151 (257)
T ss_pred CCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCcc----
Confidence 9999999997653 5899999999999999999999999999999999999999999999999998654311110
Q ss_pred chhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHHHHHHH
Q 001847 835 TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANI 913 (1005)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~Pf~~~~~~~~~~~i 913 (1005)
........++..|+|||.+....++.++|||||||++|+|++ |..||...+..+....+
T Consensus 152 --------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~ 211 (257)
T cd05060 152 --------------------YRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAML 211 (257)
T ss_pred --------------------cccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHH
Confidence 000111224567999999988889999999999999999997 99999887776665555
Q ss_pred HhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHH
Q 001847 914 LHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGAN 953 (1005)
Q Consensus 914 ~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~ 953 (1005)
.... ..+.....+..+.+||.+||..+|.+||++.++++
T Consensus 212 ~~~~-~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~ 250 (257)
T cd05060 212 ESGE-RLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELES 250 (257)
T ss_pred HcCC-cCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 4442 33344456788999999999999999999544333
No 323
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=2.3e-33 Score=312.68 Aligned_cols=262 Identities=27% Similarity=0.420 Sum_probs=210.8
Q ss_pred cccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCC
Q 001847 667 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKT 745 (1005)
Q Consensus 667 ~~i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~ 745 (1005)
..+..+.|++.+.||+|++|.||++.+..+++.||+|.++... .......+..|+.++..+ +|+||+++++++....
T Consensus 10 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~ 87 (296)
T cd06618 10 YPADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTG--NKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDS 87 (296)
T ss_pred ccCCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccC--ChHHHHHHHHHHHHHHhccCCCchHhhheeeecCC
Confidence 3466789999999999999999999998889999999987542 223345566677766666 5999999999999999
Q ss_pred eEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCcccCCCCCCcEEEecCCcEEEEeccCCccc
Q 001847 746 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 824 (1005)
Q Consensus 746 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~-~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~ 824 (1005)
..|++|||+ +++|.+++.... ..+++..+..++.||+.||.|||+ .||+||||+|+||++++++.+||+|||++...
T Consensus 88 ~~~~v~e~~-~~~l~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~ 165 (296)
T cd06618 88 DVFICMELM-STCLDKLLKRIQ-GPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRL 165 (296)
T ss_pred eEEEEeecc-CcCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhc
Confidence 999999999 567777766532 368999999999999999999997 59999999999999999999999999987543
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCC----CCChhhHHHHHHHHHHHHcCCCC
Q 001847 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG----HTSAVDWWALGILLYEMLYGYTP 900 (1005)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~----~~~~sDIwSlGvll~eLltG~~P 900 (1005)
.... ......+++.|+|||.+.+.. ++.++||||||+++|+|++|+.|
T Consensus 166 ~~~~----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p 217 (296)
T cd06618 166 VDSK----------------------------AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFP 217 (296)
T ss_pred cCCC----------------------------cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCC
Confidence 2110 011224778999999986553 67899999999999999999999
Q ss_pred CCCCCh-HHHHHHHHhCCCC-CCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCC
Q 001847 901 FRGKTR-QKTFANILHKDLK-FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 964 (1005)
Q Consensus 901 f~~~~~-~~~~~~i~~~~~~-~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~ 964 (1005)
|..... .+.+..+...... .+....++..+.+|+.+||..||.+||+ +.++++||||+..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~----~~~il~~~~~~~~ 279 (296)
T cd06618 218 YKNCKTEFEVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPK----YRELLQHPFIRRY 279 (296)
T ss_pred CCcchhHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCC----HHHHhcChhhhcc
Confidence 976433 3445555544322 2233346788999999999999999999 9999999999863
No 324
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=2.6e-33 Score=307.49 Aligned_cols=257 Identities=23% Similarity=0.324 Sum_probs=209.2
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCe---EEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQ---YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 747 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~---~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 747 (1005)
...|++.+.||.|+||.||+|.+..+++ .|++|.+.... .......+..|+.+++.++||||+++++++......
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 80 (269)
T cd05065 3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY--TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPV 80 (269)
T ss_pred hHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCce
Confidence 4579999999999999999999977664 69999987542 344557788999999999999999999999999999
Q ss_pred EEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001847 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (1005)
Q Consensus 748 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 827 (1005)
++||||+.+++|.+++.... +.++...++.++.|++.||.|||++|++|+||||+||+++.++.++|+|||++......
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 159 (269)
T cd05065 81 MIITEFMENGALDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 159 (269)
T ss_pred EEEEecCCCCcHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccC
Confidence 99999999999999987543 45899999999999999999999999999999999999999999999999988543211
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCh
Q 001847 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 906 (1005)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~Pf~~~~~ 906 (1005)
.... .........++..|+|||.+....++.++|||||||++|++++ |..||.....
T Consensus 160 ~~~~----------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~ 217 (269)
T cd05065 160 TSDP----------------------TYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 217 (269)
T ss_pred cccc----------------------ccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCH
Confidence 1000 0000011112457999999988889999999999999999886 9999988777
Q ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHc
Q 001847 907 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 957 (1005)
Q Consensus 907 ~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 957 (1005)
......+. .....+....++..+.+++.+||..+|++||+ +.+++.
T Consensus 218 ~~~~~~i~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~i~~ 263 (269)
T cd05065 218 QDVINAIE-QDYRLPPPMDCPTALHQLMLDCWQKDRNARPK----FGQIVS 263 (269)
T ss_pred HHHHHHHH-cCCcCCCcccCCHHHHHHHHHHcCCChhhCcC----HHHHHH
Confidence 66666554 33444444557888999999999999999999 566553
No 325
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=2.3e-33 Score=310.22 Aligned_cols=255 Identities=27% Similarity=0.434 Sum_probs=208.6
Q ss_pred ccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC--CeEEEEE
Q 001847 674 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--THVCLIT 751 (1005)
Q Consensus 674 y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~--~~~~lV~ 751 (1005)
|++++.||.|++|.||++.+..+++.+|+|.+.... ........+.+|+.+++.++|+|++++++++... +..|+||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 79 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN-EKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVF 79 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc-ccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEe
Confidence 778899999999999999999899999999998653 2333445677899999999999999999999987 8999999
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 831 (1005)
||+. ++|..++.... ..+++..++.++.||+.||+|||+.|++|+||+|+||++++++.++|+|||++........
T Consensus 80 e~~~-~~l~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~-- 155 (287)
T cd07840 80 EYMD-HDLTGLLDSPE-VKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS-- 155 (287)
T ss_pred cccc-ccHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCc--
Confidence 9995 58888886542 4689999999999999999999999999999999999999999999999998854432110
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001847 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 910 (1005)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~ 910 (1005)
.......++..|+|||.+.+ ..++.++||||||+++|+|++|+.||...+.....
T Consensus 156 ------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~ 211 (287)
T cd07840 156 ------------------------ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQL 211 (287)
T ss_pred ------------------------ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence 01122356788999998765 45688999999999999999999999887766555
Q ss_pred HHHHhCCC-----CCCC-----------------------CCC-CCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCC
Q 001847 911 ANILHKDL-----KFPS-----------------------STP-TSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 961 (1005)
Q Consensus 911 ~~i~~~~~-----~~~~-----------------------~~~-~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff 961 (1005)
..+..... .++. ... ++..+.+++.+||..+|.+||+ ++++++||||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~----~~~~l~~~~~ 287 (287)
T cd07840 212 EKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRIS----ADQALQHEYF 287 (287)
T ss_pred HHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcC----HHHHhhCcCC
Confidence 55443100 0000 011 2778899999999999999999 9999999997
No 326
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=3.7e-33 Score=308.28 Aligned_cols=252 Identities=20% Similarity=0.292 Sum_probs=200.8
Q ss_pred ccCCccccccccccCcEEEEEEEEcCCCe----EEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 001847 670 NLQHFRPIKPLGSGDTGSVHLVELCGSGQ----YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 745 (1005)
Q Consensus 670 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~----~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 745 (1005)
..++|++++.||.|+||.||++.+..++. .+++|.+... ........+..|+.+++.++||||+++++++.. .
T Consensus 5 ~~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~ 81 (279)
T cd05111 5 KETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR--SGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-A 81 (279)
T ss_pred CHhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccc--cchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-C
Confidence 45689999999999999999999977765 4677776432 123344667788889999999999999998754 5
Q ss_pred eEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 001847 746 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 825 (1005)
Q Consensus 746 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~ 825 (1005)
..++++||+.+++|.+++.... ..+++..+..++.||+.||.|||++|++|+||||+||+++.++.+||+|||++....
T Consensus 82 ~~~~i~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~ 160 (279)
T cd05111 82 SLQLVTQLSPLGSLLDHVRQHR-DSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLY 160 (279)
T ss_pred ccEEEEEeCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceecc
Confidence 5789999999999999997542 458999999999999999999999999999999999999999999999999985432
Q ss_pred CCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCC
Q 001847 826 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGK 904 (1005)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~Pf~~~ 904 (1005)
..... .......++..|+|||.+.+..++.++|||||||++|+|++ |..||.+.
T Consensus 161 ~~~~~-------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~ 215 (279)
T cd05111 161 PDDKK-------------------------YFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGM 215 (279)
T ss_pred CCCcc-------------------------cccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCC
Confidence 11100 01122456778999999988889999999999999999998 99999887
Q ss_pred ChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhc
Q 001847 905 TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 951 (1005)
Q Consensus 905 ~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~ 951 (1005)
........+ ......+....++..+.+++.+||..+|++||++.++
T Consensus 216 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el 261 (279)
T cd05111 216 RPHEVPDLL-EKGERLAQPQICTIDVYMVMVKCWMIDENVRPTFKEL 261 (279)
T ss_pred CHHHHHHHH-HCCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHH
Confidence 665544333 3323333333467788999999999999999994443
No 327
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=3.4e-33 Score=306.21 Aligned_cols=254 Identities=22% Similarity=0.301 Sum_probs=207.6
Q ss_pred ccCCccccccccccCcEEEEEEEEcCCCe---EEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 001847 670 NLQHFRPIKPLGSGDTGSVHLVELCGSGQ---YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 746 (1005)
Q Consensus 670 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~---~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 746 (1005)
..+.|...+.||+|+||.||+|.+..++. .+++|.+.... .......+.+|+++++.++|+||+++++++...+.
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (268)
T cd05063 3 HPSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY--TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKP 80 (268)
T ss_pred ChHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC--CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCC
Confidence 34578999999999999999999876554 79999886542 23345678889999999999999999999999999
Q ss_pred EEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 001847 747 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 826 (1005)
Q Consensus 747 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~ 826 (1005)
.|+||||+++++|.+++.... ..++...+..++.|++.||.|||+.|++|+||||+||+++.++.+||+|||++.....
T Consensus 81 ~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 159 (268)
T cd05063 81 AMIITEYMENGALDKYLRDHD-GEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLED 159 (268)
T ss_pred cEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceeccc
Confidence 999999999999999987543 4589999999999999999999999999999999999999999999999998854321
Q ss_pred CCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCC
Q 001847 827 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKT 905 (1005)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~Pf~~~~ 905 (1005)
.... .........++.|+|||++....++.++|||||||++|+|++ |..||...+
T Consensus 160 ~~~~------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~ 215 (268)
T cd05063 160 DPEG------------------------TYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMS 215 (268)
T ss_pred cccc------------------------ceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCC
Confidence 1100 000111223567999999988888999999999999999997 999998877
Q ss_pred hHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhc
Q 001847 906 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 951 (1005)
Q Consensus 906 ~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~ 951 (1005)
..+....+... ...+.....+..+.+|+.+||..+|++||++.++
T Consensus 216 ~~~~~~~i~~~-~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i 260 (268)
T cd05063 216 NHEVMKAINDG-FRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDI 260 (268)
T ss_pred HHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHH
Confidence 76666666543 3444445578899999999999999999994443
No 328
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=1.6e-33 Score=315.60 Aligned_cols=268 Identities=26% Similarity=0.376 Sum_probs=207.4
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC------
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 744 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------ 744 (1005)
.++|++.+.||.|+||.||++.+..++..+|+|.+......+ .......+|+++++.++||||+++++++...
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 85 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKD-GFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKR 85 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCC-CcchhHHHHHHHHHhcCCCCccchhhheecccccccc
Confidence 579999999999999999999999999999999987543212 1223566899999999999999999887543
Q ss_pred --CeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCc
Q 001847 745 --THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 822 (1005)
Q Consensus 745 --~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~ 822 (1005)
..+|+||||+. ++|...+... ...+++..++.++.||+.||.|||++||+|+||||+||++++++.++|+|||++.
T Consensus 86 ~~~~~~lv~~~~~-~~l~~~~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~ 163 (311)
T cd07866 86 KRGSVYMVTPYMD-HDLSGLLENP-SVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLAR 163 (311)
T ss_pred cCceEEEEEecCC-cCHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccch
Confidence 35799999994 5676666543 3469999999999999999999999999999999999999999999999999986
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCC
Q 001847 823 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPF 901 (1005)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlGvll~eLltG~~Pf 901 (1005)
.......... ..............+++.|+|||.+.+. .++.++|||||||++|+|++|++||
T Consensus 164 ~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~ 227 (311)
T cd07866 164 PYDGPPPNPK----------------GGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPIL 227 (311)
T ss_pred hccCCCcccc----------------cCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCC
Confidence 5432211100 0000011122345788999999988654 5788999999999999999999999
Q ss_pred CCCChHHHHHHHHhCCCC-----C------C---------C--------CCCCCHHHHHHHHHccccCcCccCCChhcHH
Q 001847 902 RGKTRQKTFANILHKDLK-----F------P---------S--------STPTSLHAKQLMYRLLHRDPKSRLGSHEGAN 953 (1005)
Q Consensus 902 ~~~~~~~~~~~i~~~~~~-----~------~---------~--------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~ 953 (1005)
.+.+.......+...... + + . ....+..+.+||.+||..||.+||| +.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t----~~ 303 (311)
T cd07866 228 QGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLT----AS 303 (311)
T ss_pred CCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcC----HH
Confidence 887776655544321000 0 0 0 0123457889999999999999999 99
Q ss_pred HHHcCCCC
Q 001847 954 EIKKHPFF 961 (1005)
Q Consensus 954 elL~hpff 961 (1005)
+++.||||
T Consensus 304 ell~~~~f 311 (311)
T cd07866 304 DALEHPYF 311 (311)
T ss_pred HHhcCCCC
Confidence 99999998
No 329
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=2e-33 Score=313.73 Aligned_cols=258 Identities=24% Similarity=0.348 Sum_probs=207.5
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC-----
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT----- 745 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~----- 745 (1005)
.++|++.+.||+|+||.||++.+..+++.||+|.++.... .......+.+|+.+++.++||||+++++++....
T Consensus 6 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~ 84 (302)
T cd07864 6 VDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNE-KEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF 84 (302)
T ss_pred hhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeeccc-ccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence 5689999999999999999999998999999999875422 2223346678999999999999999999887654
Q ss_pred -----eEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccC
Q 001847 746 -----HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 820 (1005)
Q Consensus 746 -----~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~ 820 (1005)
.+|+||||+++ +|..++... ...+++..++.++.||+.||+|||+.||+|+||||+||++++++.+||+|||.
T Consensus 85 ~~~~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg~ 162 (302)
T cd07864 85 KKDKGAFYLVFEYMDH-DLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGL 162 (302)
T ss_pred cccCCcEEEEEcccCc-cHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCcccc
Confidence 79999999965 777776654 34589999999999999999999999999999999999999999999999998
Q ss_pred CcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCC
Q 001847 821 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYT 899 (1005)
Q Consensus 821 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlGvll~eLltG~~ 899 (1005)
+........ .......+++.|+|||.+.+. .++.++|||||||++|+|++|++
T Consensus 163 ~~~~~~~~~--------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~ 216 (302)
T cd07864 163 ARLYNSEES--------------------------RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKP 216 (302)
T ss_pred cccccCCcc--------------------------cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCC
Confidence 854321110 011123467889999988653 46889999999999999999999
Q ss_pred CCCCCChHHHHHHHHhC---CCC--C-----------------------CCCCCCCHHHHHHHHHccccCcCccCCChhc
Q 001847 900 PFRGKTRQKTFANILHK---DLK--F-----------------------PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 951 (1005)
Q Consensus 900 Pf~~~~~~~~~~~i~~~---~~~--~-----------------------~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~ 951 (1005)
||........+..+... ... + .....++..+.+||.+||..+|.+||+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~---- 292 (302)
T cd07864 217 IFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCT---- 292 (302)
T ss_pred CCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCC----
Confidence 99877665555444331 100 0 011235778999999999999999999
Q ss_pred HHHHHcCCCC
Q 001847 952 ANEIKKHPFF 961 (1005)
Q Consensus 952 a~elL~hpff 961 (1005)
+.+++.||||
T Consensus 293 ~~~il~~~~~ 302 (302)
T cd07864 293 AEEALNSPWL 302 (302)
T ss_pred HHHHhcCCCC
Confidence 9999999997
No 330
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=3.8e-33 Score=309.84 Aligned_cols=251 Identities=21% Similarity=0.311 Sum_probs=203.4
Q ss_pred CccccccccccCcEEEEEEEEcC-----CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 747 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~-----~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 747 (1005)
+|++.+.||+|+||.||++.+.. ....+++|.+.... .......+.+|+.+++.++||||+++++.+...+..
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 78 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA--SSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPL 78 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCC--CHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCc
Confidence 48899999999999999999743 23578899886542 234456788999999999999999999999999999
Q ss_pred EEEEeccCCCchhhHHhhC----------------------CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcE
Q 001847 748 CLITDYCPGGELFLLLDRQ----------------------PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 805 (1005)
Q Consensus 748 ~lV~E~~~ggsL~~~l~~~----------------------~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NI 805 (1005)
+++|||+.+++|.+++... ....++...+..++.|++.||.|||++|++||||||+||
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~ni 158 (290)
T cd05045 79 LLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNV 158 (290)
T ss_pred EEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheE
Confidence 9999999999999987642 113478899999999999999999999999999999999
Q ss_pred EEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHH
Q 001847 806 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 885 (1005)
Q Consensus 806 Li~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIw 885 (1005)
|+++++.+||+|||++......... .......++..|+|||.+.+..++.++|||
T Consensus 159 ll~~~~~~kl~dfg~~~~~~~~~~~-------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~ 213 (290)
T cd05045 159 LVAEGRKMKISDFGLSRDVYEEDSY-------------------------VKRSKGRIPVKWMAIESLFDHIYTTQSDVW 213 (290)
T ss_pred EEcCCCcEEeccccccccccCccch-------------------------hcccCCCCCccccCHHHHccCCcchHhHHH
Confidence 9999999999999998543211100 011123456789999999888889999999
Q ss_pred HHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhc
Q 001847 886 ALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 951 (1005)
Q Consensus 886 SlGvll~eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~ 951 (1005)
|||+++|+|++ |..||.+.........+ ......+.....+..+.+|+.+||+.+|.+||++.++
T Consensus 214 slG~~l~el~t~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i 279 (290)
T cd05045 214 SFGVLLWEIVTLGGNPYPGIAPERLFNLL-KTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADI 279 (290)
T ss_pred HHHHHHHHHHhcCCCCCCCCCHHHHHHHH-hCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHH
Confidence 99999999998 99999887766655443 3334444445578899999999999999999994443
No 331
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.5e-34 Score=335.39 Aligned_cols=255 Identities=24% Similarity=0.363 Sum_probs=220.2
Q ss_pred cccCCccccccccccCcEEEEEEEEc-----CCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 001847 669 INLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 743 (1005)
Q Consensus 669 i~~~~y~~~~~LG~G~~g~Vy~a~~~-----~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 743 (1005)
+.....+..+.||+|+||+||+++.. .....||||.++... +.....+|.+|++++..++|||||++++++..
T Consensus 483 i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a--~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~ 560 (774)
T KOG1026|consen 483 IPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA--ENQARQDFRREAELLAELQHPNIVRLLGVCRE 560 (774)
T ss_pred echhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc--cHHHHHHHHHHHHHHHhccCCCeEEEEEEEcc
Confidence 44567888899999999999999873 234679999998653 44467899999999999999999999999999
Q ss_pred CCeEEEEEeccCCCchhhHHhhC--------C----CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCC
Q 001847 744 KTHVCLITDYCPGGELFLLLDRQ--------P----TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG 811 (1005)
Q Consensus 744 ~~~~~lV~E~~~ggsL~~~l~~~--------~----~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g 811 (1005)
++.+|+|+|||..|+|.++|... . ...|+..+...|+.||+.|+.||-++.+|||||-..|+||.++-
T Consensus 561 ~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l 640 (774)
T KOG1026|consen 561 GDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENL 640 (774)
T ss_pred CCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccce
Confidence 99999999999999999999742 1 12388999999999999999999999999999999999999999
Q ss_pred cEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHH
Q 001847 812 HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILL 891 (1005)
Q Consensus 812 ~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll 891 (1005)
.|||+|||+++..... ++. +....-.-..+|||||.+....++.+||||||||+|
T Consensus 641 ~VKIsDfGLsRdiYss---------DYY----------------k~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvL 695 (774)
T KOG1026|consen 641 VVKISDFGLSRDIYSS---------DYY----------------KVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVL 695 (774)
T ss_pred EEEecccccchhhhhh---------hhh----------------cccCCceeeeecCCHHHhhcCcccchhhhhhhhhhh
Confidence 9999999999654311 011 111122346789999999999999999999999999
Q ss_pred HHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhc
Q 001847 892 YEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 951 (1005)
Q Consensus 892 ~eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~ 951 (1005)
||+++ |.-||.+....+.+..|..+.. ++.+..++.++.+|+..||+.+|.+||++.++
T Consensus 696 WEIFsyG~QPy~glSn~EVIe~i~~g~l-L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI 755 (774)
T KOG1026|consen 696 WEIFSYGKQPYYGLSNQEVIECIRAGQL-LSCPENCPTEVYSLMLECWNENPKRRPSFKEI 755 (774)
T ss_pred hhhhccccCcccccchHHHHHHHHcCCc-ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHH
Confidence 99996 9999999999999999999988 88888899999999999999999999997663
No 332
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=2e-33 Score=319.21 Aligned_cols=263 Identities=28% Similarity=0.426 Sum_probs=210.1
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeC--CeE
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTK--THV 747 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~--~~~ 747 (1005)
.++|++.+.||+|+||.||++.+..++..+|+|.+.... ........+..|+.+++++ +|+||+++++++... ...
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~-~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAF-RNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeecccc-CcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 468999999999999999999998899999999886532 2233445677899999999 999999999998653 468
Q ss_pred EEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001847 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (1005)
Q Consensus 748 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 827 (1005)
|+||||+. ++|..++... .+++..++.++.||+.||.|||++||+|+||||+||+++.++.+||+|||++......
T Consensus 85 ~lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~ 160 (337)
T cd07852 85 YLVFEYME-TDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSEL 160 (337)
T ss_pred EEEecccc-cCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhccccc
Confidence 99999995 6998888653 5888999999999999999999999999999999999999999999999988654221
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001847 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTR 906 (1005)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~ 906 (1005)
.... .........|++.|+|||.+.+ ..++.++|||||||++|+|++|+.||.+...
T Consensus 161 ~~~~----------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~ 218 (337)
T cd07852 161 EENP----------------------ENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTST 218 (337)
T ss_pred cccc----------------------cCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCCh
Confidence 1100 0011223568999999998765 4567899999999999999999999987665
Q ss_pred HHHHHHHHhCCCC----------------------------C-CCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHc
Q 001847 907 QKTFANILHKDLK----------------------------F-PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 957 (1005)
Q Consensus 907 ~~~~~~i~~~~~~----------------------------~-~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 957 (1005)
......+...... . ......+.++.+||.+||+.+|++||+ +.++++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps----~~~il~ 294 (337)
T cd07852 219 LNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLT----AEEALE 294 (337)
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccC----HHHHhh
Confidence 5444333221100 0 001225778999999999999999999 999999
Q ss_pred CCCCCCC
Q 001847 958 HPFFKGV 964 (1005)
Q Consensus 958 hpff~~~ 964 (1005)
||||+.+
T Consensus 295 ~~~~~~~ 301 (337)
T cd07852 295 HPYVAQF 301 (337)
T ss_pred Chhhhhh
Confidence 9999986
No 333
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=4.2e-33 Score=308.25 Aligned_cols=250 Identities=23% Similarity=0.345 Sum_probs=195.2
Q ss_pred CCc-cccccccccCcEEEEEEEE----cCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEe--C
Q 001847 672 QHF-RPIKPLGSGDTGSVHLVEL----CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT--K 744 (1005)
Q Consensus 672 ~~y-~~~~~LG~G~~g~Vy~a~~----~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~ 744 (1005)
++| ++++.||.|+||+||++.. ..++..+|+|.++... .......+.+|+.+++.++||||+++++++.. .
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 80 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC--GQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGG 80 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc--ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC
Confidence 345 9999999999999988653 3567899999987542 22345677889999999999999999998765 3
Q ss_pred CeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCccc
Q 001847 745 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 824 (1005)
Q Consensus 745 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~ 824 (1005)
..+|+||||+.+++|.+++... .+++..++.++.|++.||.|||++||+|+||||+|||++.++.++|+|||++...
T Consensus 81 ~~~~lv~e~~~~~~l~~~~~~~---~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~ 157 (283)
T cd05080 81 KGLQLIMEYVPLGSLRDYLPKH---KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 157 (283)
T ss_pred ceEEEEecCCCCCCHHHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeeccccccc
Confidence 4689999999999999998763 4899999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001847 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 904 (1005)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~ 904 (1005)
...... ........++..|+|||.+.+..++.++|||||||++|+|++|+.||...
T Consensus 158 ~~~~~~------------------------~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~ 213 (283)
T cd05080 158 PEGHEY------------------------YRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSP 213 (283)
T ss_pred CCcchh------------------------hccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCC
Confidence 211100 00111224566799999998888899999999999999999999998643
Q ss_pred ChH--------------HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChh
Q 001847 905 TRQ--------------KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 950 (1005)
Q Consensus 905 ~~~--------------~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~ 950 (1005)
... .............+....++..+.+|+.+||..+|++||++.+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~ 273 (283)
T cd05080 214 PKKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRS 273 (283)
T ss_pred cchhhhhhcccccccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHH
Confidence 211 0111111122222333456789999999999999999999443
No 334
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.6e-33 Score=313.02 Aligned_cols=255 Identities=22% Similarity=0.308 Sum_probs=205.4
Q ss_pred ccccCCccccccccccCcEEEEEEEEcC-------CCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceEEE
Q 001847 668 QINLQHFRPIKPLGSGDTGSVHLVELCG-------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYA 739 (1005)
Q Consensus 668 ~i~~~~y~~~~~LG~G~~g~Vy~a~~~~-------~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~ 739 (1005)
.+..++|.+.+.||+|+||.||+|.+.. ....+|+|.++... .......+.+|+.+++.+ +||||+++++
T Consensus 8 ~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~ 85 (314)
T cd05099 8 EFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA--TDKDLADLISEMELMKLIGKHKNIINLLG 85 (314)
T ss_pred cccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC--ChHHHHHHHHHHHHHHhccCCCCeeeEEE
Confidence 3445689999999999999999998632 34579999887532 234456788899999999 6999999999
Q ss_pred EEEeCCeEEEEEeccCCCchhhHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcE
Q 001847 740 SFQTKTHVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 805 (1005)
Q Consensus 740 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NI 805 (1005)
++...+.+|+||||+.+++|.+++.... ...++...+..++.||+.||.|||++|++|+||||+||
T Consensus 86 ~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Ni 165 (314)
T cd05099 86 VCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNV 165 (314)
T ss_pred EEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeE
Confidence 9999899999999999999999997532 23488899999999999999999999999999999999
Q ss_pred EEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHH
Q 001847 806 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 885 (1005)
Q Consensus 806 Li~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIw 885 (1005)
|++.++.+||+|||++........ ........+++.|+|||++.+..++.++|||
T Consensus 166 ll~~~~~~kL~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diw 220 (314)
T cd05099 166 LVTEDNVMKIADFGLARGVHDIDY-------------------------YKKTSNGRLPVKWMAPEALFDRVYTHQSDVW 220 (314)
T ss_pred EEcCCCcEEEcccccccccccccc-------------------------ccccccCCCCccccCHHHHccCCcCccchhh
Confidence 999999999999999854321100 0001112245679999999888889999999
Q ss_pred HHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChh
Q 001847 886 ALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 950 (1005)
Q Consensus 886 SlGvll~eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~ 950 (1005)
||||++|+|++ |..||.+......+..+..... ......++..+.+|+.+||..+|.+||++.+
T Consensus 221 slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 285 (314)
T cd05099 221 SFGILMWEIFTLGGSPYPGIPVEELFKLLREGHR-MDKPSNCTHELYMLMRECWHAVPTQRPTFKQ 285 (314)
T ss_pred HHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC-CCCCCCCCHHHHHHHHHHcCCCcccCcCHHH
Confidence 99999999998 9999988777666666554432 2223456788999999999999999999443
No 335
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=1.6e-33 Score=307.33 Aligned_cols=256 Identities=29% Similarity=0.466 Sum_probs=211.1
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeeccccc--ChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--NRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 750 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 750 (1005)
+|.+.+.||+|+||.||++.+..++..+++|+++..... .......+..|+.+++.++||||+++++++......|+|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 588999999999999999999887777777776643221 223344566789999999999999999999999999999
Q ss_pred EeccCCCchhhHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 001847 751 TDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 828 (1005)
Q Consensus 751 ~E~~~ggsL~~~l~~--~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~ 828 (1005)
|||+++++|.+++.. .....+++..++.++.|++.||.|||++|++|+||+|+||++++ +.++|+|||.+......
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~- 158 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGS- 158 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccCceeecCCC-
Confidence 999999999988864 23356899999999999999999999999999999999999984 67999999987543211
Q ss_pred CCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001847 829 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 908 (1005)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~ 908 (1005)
........|++.|+|||.+.+..++.++|+||||+++|+|++|..||.......
T Consensus 159 --------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~ 212 (260)
T cd08222 159 --------------------------CDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLS 212 (260)
T ss_pred --------------------------cccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH
Confidence 011223457889999999988888889999999999999999999998777666
Q ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCC
Q 001847 909 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 961 (1005)
Q Consensus 909 ~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff 961 (1005)
....+.....+. ....++..+.++|.+||..+|++||+ +.++++||||
T Consensus 213 ~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~il~~~~~ 260 (260)
T cd08222 213 VVLRIVEGPTPS-LPETYSRQLNSIMQSMLNKDPSLRPS----AAEILRNPFI 260 (260)
T ss_pred HHHHHHcCCCCC-CcchhcHHHHHHHHHHhcCChhhCcC----HHHHhhCCCC
Confidence 666665543322 22356788999999999999999999 9999999997
No 336
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-35 Score=353.50 Aligned_cols=261 Identities=28% Similarity=0.480 Sum_probs=220.5
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
-+++....||.|.||.||.|.+..+|...|+|-++.... .......+.+|..++..++|||+|+++++-.....++|.|
T Consensus 1235 ~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~-~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFM 1313 (1509)
T KOG4645|consen 1235 FRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDS-DHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFM 1313 (1509)
T ss_pred eeeccccccCCcceeeeEEeecCCccchhhhhhhhcCcc-ccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHH
Confidence 357777889999999999999999999999998876533 2455667788999999999999999999999999999999
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 831 (1005)
|||.+|+|.+++... +..++...+.+..|++.|++|||+.|||||||||.||+++.+|.+|++|||.|..........
T Consensus 1314 EyC~~GsLa~ll~~g--ri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~ 1391 (1509)
T KOG4645|consen 1314 EYCEGGSLASLLEHG--RIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTM 1391 (1509)
T ss_pred HHhccCcHHHHHHhc--chhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchhcC
Confidence 999999999999764 458888899999999999999999999999999999999999999999999997654332111
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC---CCCChhhHHHHHHHHHHHHcCCCCCCCCCh-H
Q 001847 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA---GHTSAVDWWALGILLYEMLYGYTPFRGKTR-Q 907 (1005)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~---~~~~~sDIwSlGvll~eLltG~~Pf~~~~~-~ 907 (1005)
. ..-....||+.|||||++.+. ...-+.|||||||++.||+||+.||...+. .
T Consensus 1392 ~-----------------------~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~ 1448 (1509)
T KOG4645|consen 1392 P-----------------------GELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEW 1448 (1509)
T ss_pred C-----------------------HHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchh
Confidence 0 122357899999999999764 456699999999999999999999987655 4
Q ss_pred HHHHHHHhCC-CCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCC
Q 001847 908 KTFANILHKD-LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 964 (1005)
Q Consensus 908 ~~~~~i~~~~-~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~ 964 (1005)
.++..+-.+. +++|.. ++.+..+||..||..||..|.+ +.|||.|.|-+..
T Consensus 1449 aIMy~V~~gh~Pq~P~~--ls~~g~dFle~Cl~~dP~~Rw~----~~qlle~~f~~~~ 1500 (1509)
T KOG4645|consen 1449 AIMYHVAAGHKPQIPER--LSSEGRDFLEHCLEQDPKMRWT----ASQLLEHAFGKSC 1500 (1509)
T ss_pred HHHhHHhccCCCCCchh--hhHhHHHHHHHHHhcCchhhhH----HHHHHHhhccccc
Confidence 4444444443 344444 8999999999999999999999 8899999998864
No 337
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=4.1e-33 Score=310.58 Aligned_cols=256 Identities=25% Similarity=0.354 Sum_probs=202.9
Q ss_pred cCCccccccccccCcEEEEEEEEcC----------------CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCc
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCG----------------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFV 734 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~----------------~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnI 734 (1005)
.++|++.+.||+|+||.||++.+.. ++..+|+|.+.... .......+.+|+.+++.++|+||
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~~E~~~l~~l~~~~i 81 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA--NKNARNDFLKEIKIMSRLKDPNI 81 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCc
Confidence 3579999999999999999986532 34578999887542 33445678899999999999999
Q ss_pred ceEEEEEEeCCeEEEEEeccCCCchhhHHhhCCC---------CCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcE
Q 001847 735 PALYASFQTKTHVCLITDYCPGGELFLLLDRQPT---------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 805 (1005)
Q Consensus 735 v~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~---------~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NI 805 (1005)
+++++++...+..|+||||+.+++|.+++..... ..++...+..++.||+.||.|||++|++|+||||+||
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Ni 161 (296)
T cd05095 82 IRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNC 161 (296)
T ss_pred ceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheE
Confidence 9999999999999999999999999999875321 2367788999999999999999999999999999999
Q ss_pred EEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHH
Q 001847 806 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 885 (1005)
Q Consensus 806 Li~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIw 885 (1005)
|++.++.++|+|||++........ ........+++.|++||......++.++|||
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Diw 216 (296)
T cd05095 162 LVGKNYTIKIADFGMSRNLYSGDY-------------------------YRIQGRAVLPIRWMSWESILLGKFTTASDVW 216 (296)
T ss_pred EEcCCCCEEeccCcccccccCCcc-------------------------eeccCcCcCccccCCHHHHhcCCccchhhhh
Confidence 999999999999999854321100 0111223456789999998888899999999
Q ss_pred HHHHHHHHHHc--CCCCCCCCChHHHHHHHHh------CCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHH
Q 001847 886 ALGILLYEMLY--GYTPFRGKTRQKTFANILH------KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGAN 953 (1005)
Q Consensus 886 SlGvll~eLlt--G~~Pf~~~~~~~~~~~i~~------~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~ 953 (1005)
||||++|+|++ |..||......+.+..... .....+....++..+.+|+.+||+.||.+||++.++++
T Consensus 217 SlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~ 292 (296)
T cd05095 217 AFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA 292 (296)
T ss_pred HHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 99999999997 7889977666554443321 11223333456788999999999999999999544333
No 338
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=3.4e-33 Score=303.85 Aligned_cols=242 Identities=21% Similarity=0.348 Sum_probs=201.5
Q ss_pred ccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 001847 670 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 749 (1005)
Q Consensus 670 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 749 (1005)
..++|++.+.||+|+||.||++.. +++.+|+|.++... ....+.+|+.+++.++||||+++++++... ..|+
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~-----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~ 75 (254)
T cd05083 4 NLQKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDV-----TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYI 75 (254)
T ss_pred cHHHceeeeeeccCCCCceEeccc--CCCceEEEeecCcc-----hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEE
Confidence 456899999999999999999875 78889999886532 235678899999999999999999998764 4799
Q ss_pred EEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 001847 750 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 829 (1005)
Q Consensus 750 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~ 829 (1005)
||||+.+++|.+++.......++...+..++.|++.||.|||++|++||||||+||+++.++.++|+|||.+......
T Consensus 76 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~-- 153 (254)
T cd05083 76 VMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG-- 153 (254)
T ss_pred EEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceecccc--
Confidence 999999999999998765556899999999999999999999999999999999999999999999999987432100
Q ss_pred CCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHH
Q 001847 830 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQK 908 (1005)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~Pf~~~~~~~ 908 (1005)
......+..|+|||.+.+..++.++|+|||||++|+|++ |+.||......+
T Consensus 154 ----------------------------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~ 205 (254)
T cd05083 154 ----------------------------VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKE 205 (254)
T ss_pred ----------------------------CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHH
Confidence 011233567999999988888999999999999999997 999998887766
Q ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChh
Q 001847 909 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 950 (1005)
Q Consensus 909 ~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~ 950 (1005)
....+..+ ........++..+.+|+.+||..+|++||++.+
T Consensus 206 ~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ 246 (254)
T cd05083 206 VKECVEKG-YRMEPPEGCPADVYVLMTSCWETEPKKRPSFHK 246 (254)
T ss_pred HHHHHhCC-CCCCCCCcCCHHHHHHHHHHcCCChhhCcCHHH
Confidence 65555443 333333457889999999999999999999443
No 339
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=8.4e-33 Score=301.61 Aligned_cols=244 Identities=21% Similarity=0.290 Sum_probs=196.5
Q ss_pred cccccCcEEEEEEEEc--CCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCC
Q 001847 679 PLGSGDTGSVHLVELC--GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPG 756 (1005)
Q Consensus 679 ~LG~G~~g~Vy~a~~~--~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~g 756 (1005)
.||+|+||.||++.+. .++..+|+|.+.... .......+.+|+.++++++|+||+++++++.. ...++||||+++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~--~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~ 78 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN--EKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASG 78 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc--ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCC
Confidence 3899999999999774 445679999887542 33445678899999999999999999998754 578999999999
Q ss_pred CchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 001847 757 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 836 (1005)
Q Consensus 757 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 836 (1005)
++|.+++... ...+++..+..++.||+.||.|||++|++|+||||+||+++.++.+||+|||++..........
T Consensus 79 ~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~----- 152 (257)
T cd05115 79 GPLNKFLSGK-KDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYY----- 152 (257)
T ss_pred CCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccce-----
Confidence 9999998653 2458999999999999999999999999999999999999999999999999885432111100
Q ss_pred hhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHHHHHHHHh
Q 001847 837 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILH 915 (1005)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~Pf~~~~~~~~~~~i~~ 915 (1005)
.......+++.|+|||.+....++.++|||||||++|+|++ |..||.+.........+..
T Consensus 153 -------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~ 213 (257)
T cd05115 153 -------------------KARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQ 213 (257)
T ss_pred -------------------eccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHC
Confidence 00111224578999999988888999999999999999996 9999988877776655554
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhc
Q 001847 916 KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 951 (1005)
Q Consensus 916 ~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~ 951 (1005)
+. ........+.++.++|.+||..+|++||++.++
T Consensus 214 ~~-~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i 248 (257)
T cd05115 214 GK-RLDCPAECPPEMYALMKDCWIYKWEDRPNFAKV 248 (257)
T ss_pred CC-CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 43 222334568899999999999999999995553
No 340
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.5e-33 Score=315.97 Aligned_cols=262 Identities=21% Similarity=0.309 Sum_probs=209.2
Q ss_pred ccccccCCccccccccccCcEEEEEEEEcCC-------CeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceE
Q 001847 666 GEQINLQHFRPIKPLGSGDTGSVHLVELCGS-------GQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPAL 737 (1005)
Q Consensus 666 ~~~i~~~~y~~~~~LG~G~~g~Vy~a~~~~~-------~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l 737 (1005)
.+.+...+|++.+.||+|+||.||+|.+... +..+|+|.+... ........+.+|+.+++++ +||||+++
T Consensus 6 ~~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~iv~~ 83 (334)
T cd05100 6 KWELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDD--ATDKDLSDLVSEMEMMKMIGKHKNIINL 83 (334)
T ss_pred ccccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccc--cCHHHHHHHHHHHHHHHhhcCCCCeeee
Confidence 3456667899999999999999999987432 236899987743 2334456788999999999 89999999
Q ss_pred EEEEEeCCeEEEEEeccCCCchhhHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCC
Q 001847 738 YASFQTKTHVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPE 803 (1005)
Q Consensus 738 ~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~ 803 (1005)
++++...+.+|++|||+++++|.+++.... ...++...+..++.||+.||.|||++|++||||||+
T Consensus 84 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~ 163 (334)
T cd05100 84 LGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAAR 163 (334)
T ss_pred eEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccc
Confidence 999999999999999999999999987532 224778889999999999999999999999999999
Q ss_pred cEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhh
Q 001847 804 NVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVD 883 (1005)
Q Consensus 804 NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sD 883 (1005)
|||++.++.+||+|||++........ ........++..|+|||++.+..++.++|
T Consensus 164 Nill~~~~~~kL~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~D 218 (334)
T cd05100 164 NVLVTEDNVMKIADFGLARDVHNIDY-------------------------YKKTTNGRLPVKWMAPEALFDRVYTHQSD 218 (334)
T ss_pred eEEEcCCCcEEECCcccceecccccc-------------------------cccccCCCcCceEcCHHHhccCCcCchhh
Confidence 99999999999999998854321100 00111223456799999999888999999
Q ss_pred HHHHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHH
Q 001847 884 WWALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 955 (1005)
Q Consensus 884 IwSlGvll~eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~el 955 (1005)
||||||++|+|++ |..||.+....+....+.... ..+.....+..+.+|+.+||..+|.+||++.+++..+
T Consensus 219 i~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l 290 (334)
T cd05100 219 VWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGH-RMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDL 290 (334)
T ss_pred hHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC-CCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHH
Confidence 9999999999998 899998887777666555432 2233345678899999999999999999944443333
No 341
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=7.9e-33 Score=306.16 Aligned_cols=255 Identities=22% Similarity=0.372 Sum_probs=199.9
Q ss_pred cCCccccccccccCcEEEEEEEE----cCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEe--C
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVEL----CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT--K 744 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~----~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~ 744 (1005)
..+|++++.||+|+||.||++.. ..++..|++|.+... .......+.+|+.+++.++||||+++++++.. .
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 79 (284)
T cd05081 3 ERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS---TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR 79 (284)
T ss_pred cccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCC
Confidence 35899999999999999999984 456889999998654 34455678899999999999999999998753 3
Q ss_pred CeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCccc
Q 001847 745 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 824 (1005)
Q Consensus 745 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~ 824 (1005)
..+|+||||+++++|.+++.... ..+++..+..++.||+.||+|||++||+|+||||+||+++.++.++|+|||++...
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~ 158 (284)
T cd05081 80 RNLRLVMEYLPYGSLRDYLQKHR-ERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVL 158 (284)
T ss_pred CceEEEEEecCCCCHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccccc
Confidence 56899999999999999987542 35899999999999999999999999999999999999999999999999998654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001847 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 904 (1005)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~ 904 (1005)
....... .......++..|+|||++.+..++.++|||||||++|+|++|..|+...
T Consensus 159 ~~~~~~~------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~ 214 (284)
T cd05081 159 PQDKEYY------------------------KVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSP 214 (284)
T ss_pred cCCCcce------------------------eecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCc
Confidence 3211100 0011122445699999998888899999999999999999987775432
Q ss_pred ChH---------------HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHc
Q 001847 905 TRQ---------------KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 957 (1005)
Q Consensus 905 ~~~---------------~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 957 (1005)
... ..+..++.....++....++..+.+|+.+||..+|++||| +.++++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt----~~ei~~ 278 (284)
T cd05081 215 PAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPS----FSELAL 278 (284)
T ss_pred chhhhhhcccccccccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCC----HHHHHH
Confidence 211 1111233333344444557789999999999999999999 555543
No 342
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-34 Score=306.88 Aligned_cols=268 Identities=28% Similarity=0.465 Sum_probs=223.5
Q ss_pred ccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccC----hHHHHHHHHHHHHHHhCCCCCcceEEEEEE-eC
Q 001847 670 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN----RNKVHRACAEREILDMLDHPFVPALYASFQ-TK 744 (1005)
Q Consensus 670 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~----~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~ 744 (1005)
..++|-++..||.|+|+.||++.|....+++|+|+-.....-. ....+...+|..|-+.|+||.||++|++|. +.
T Consensus 461 Ln~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDt 540 (775)
T KOG1151|consen 461 LNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDT 540 (775)
T ss_pred hHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecc
Confidence 3578999999999999999999999999999999876432211 223445578999999999999999999997 56
Q ss_pred CeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHc--CcccCCCCCCcEEEecC---CcEEEEecc
Q 001847 745 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ--GIIYRDLKPENVLLQGN---GHVSLTDFD 819 (1005)
Q Consensus 745 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~--gIvHrDLkP~NILi~~~---g~vkL~DFG 819 (1005)
+.+|-|+|||+|.+|.-|++.+ +.+++..++.|+.||+.||.||... -|||-||||.|||+.+. |.+||.|||
T Consensus 541 dsFCTVLEYceGNDLDFYLKQh--klmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFG 618 (775)
T KOG1151|consen 541 DSFCTVLEYCEGNDLDFYLKQH--KLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFG 618 (775)
T ss_pred ccceeeeeecCCCchhHHHHhh--hhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecc
Confidence 7899999999999999999875 5699999999999999999999987 59999999999999743 679999999
Q ss_pred CCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC----CCCChhhHHHHHHHHHHHH
Q 001847 820 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA----GHTSAVDWWALGILLYEML 895 (1005)
Q Consensus 820 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~----~~~~~sDIwSlGvll~eLl 895 (1005)
++++++++.... .......+...||.+|++||.+.-+ ..+.++||||.||++|.++
T Consensus 619 LSKIMdddSy~~--------------------vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQCl 678 (775)
T KOG1151|consen 619 LSKIMDDDSYNS--------------------VDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCL 678 (775)
T ss_pred hhhhccCCccCc--------------------ccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhh
Confidence 999987654321 2233455667899999999998544 4577999999999999999
Q ss_pred cCCCCCCCCChH-HHHH--HHH-hCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCC
Q 001847 896 YGYTPFRGKTRQ-KTFA--NIL-HKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 963 (1005)
Q Consensus 896 tG~~Pf~~~~~~-~~~~--~i~-~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~ 963 (1005)
.|+-||...... .++. .|+ .....+|..+..+.++++||++||.+.-+.|.. +.+|-.||||..
T Consensus 679 YGrKPFGhnqsQQdILqeNTIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~D----V~qLA~dpyllP 746 (775)
T KOG1151|consen 679 YGRKPFGHNQSQQDILQENTILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRID----VQQLACDPYLLP 746 (775)
T ss_pred ccCCCCCCchhHHHHHhhhchhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhh----HHHHccCccccc
Confidence 999999765432 2222 222 345678888889999999999999999999999 999999999986
No 343
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.7e-34 Score=321.01 Aligned_cols=244 Identities=34% Similarity=0.520 Sum_probs=207.3
Q ss_pred ccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEE
Q 001847 670 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVC 748 (1005)
Q Consensus 670 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~ 748 (1005)
....|.+...+|.|+|+.|-.+.+..+++.+++|++.+.. .+..+|+.++... +||||+++++.+....+.|
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~-------~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~ 392 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA-------DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIY 392 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccc-------cccccccchhhhhcCCCcceeecceecCCceee
Confidence 3678999999999999999999999999999999997651 2334566565555 8999999999999999999
Q ss_pred EEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEE-ecCCcEEEEeccCCcccCCC
Q 001847 749 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL-QGNGHVSLTDFDLSCLTSCK 827 (1005)
Q Consensus 749 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi-~~~g~vkL~DFG~a~~~~~~ 827 (1005)
+|||++.|+-|.+.+...+. +. ..+..|+.+|+.+|.|||.+|||||||||+|||+ ++.|+++|+|||.++....+
T Consensus 393 ~v~e~l~g~ell~ri~~~~~--~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~ 469 (612)
T KOG0603|consen 393 LVMELLDGGELLRRIRSKPE--FC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS 469 (612)
T ss_pred eeehhccccHHHHHHHhcch--hH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchh
Confidence 99999999988888776432 33 6777899999999999999999999999999999 58899999999998653311
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001847 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 907 (1005)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~ 907 (1005)
..+.+-|..|.|||++....++.++|+||||++||+|++|+.||......
T Consensus 470 ------------------------------~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~ 519 (612)
T KOG0603|consen 470 ------------------------------CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG 519 (612)
T ss_pred ------------------------------hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch
Confidence 12346789999999999999999999999999999999999999876655
Q ss_pred -HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCC
Q 001847 908 -KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 961 (1005)
Q Consensus 908 -~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff 961 (1005)
+++..+..+.+. ..+|..+++||++||+.||.+|++ +.+++.||||
T Consensus 520 ~ei~~~i~~~~~s----~~vS~~AKdLl~~LL~~dP~~Rl~----~~~i~~h~w~ 566 (612)
T KOG0603|consen 520 IEIHTRIQMPKFS----ECVSDEAKDLLQQLLQVDPALRLG----ADEIGAHPWF 566 (612)
T ss_pred HHHHHhhcCCccc----cccCHHHHHHHHHhccCChhhCcC----hhhhccCcch
Confidence 444444333332 457999999999999999999999 9999999999
No 344
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=7.4e-33 Score=301.28 Aligned_cols=250 Identities=21% Similarity=0.337 Sum_probs=205.8
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 750 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 750 (1005)
..+|++.+.||.|+||.||++.+. .+..+++|.+..... ....+.+|++++++++||||+++++++......|+|
T Consensus 3 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v 77 (256)
T cd05112 3 PSELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAM----SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLV 77 (256)
T ss_pred hhHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCC----CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEE
Confidence 457999999999999999999884 467899998875432 234677899999999999999999999999999999
Q ss_pred EeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001847 751 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (1005)
Q Consensus 751 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 830 (1005)
|||+.+++|.+++.... ..+++..++.++.|++.+|+|||+.|++|+||||+||+++.++.++|+|||++.......
T Consensus 78 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-- 154 (256)
T cd05112 78 FEFMEHGCLSDYLRAQR-GKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQ-- 154 (256)
T ss_pred EEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCc--
Confidence 99999999999987543 358899999999999999999999999999999999999999999999999875432110
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHHH
Q 001847 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKT 909 (1005)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~Pf~~~~~~~~ 909 (1005)
........++..|+|||.+.+..++.++||||||+++|+|++ |..||........
T Consensus 155 ------------------------~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~ 210 (256)
T cd05112 155 ------------------------YTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEV 210 (256)
T ss_pred ------------------------ccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHH
Confidence 001112235678999999988888999999999999999998 9999988777666
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHc
Q 001847 910 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 957 (1005)
Q Consensus 910 ~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 957 (1005)
...+..... .......+..+.+|+.+||..+|++||+ +.++++
T Consensus 211 ~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~p~~Rp~----~~~~l~ 253 (256)
T cd05112 211 VETINAGFR-LYKPRLASQSVYELMQHCWKERPEDRPS----FSLLLH 253 (256)
T ss_pred HHHHhCCCC-CCCCCCCCHHHHHHHHHHcccChhhCCC----HHHHHH
Confidence 666654422 2222346788999999999999999999 666664
No 345
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=1.1e-32 Score=304.43 Aligned_cols=255 Identities=22% Similarity=0.301 Sum_probs=207.7
Q ss_pred ccCCccccccccccCcEEEEEEEEcCCCe----EEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 001847 670 NLQHFRPIKPLGSGDTGSVHLVELCGSGQ----YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 745 (1005)
Q Consensus 670 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~----~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 745 (1005)
...+|++.+.||+|+||.||++.+..+|. .+++|.+.... .......+.+|+.+++.++|+||+++++++.. .
T Consensus 5 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~ 81 (279)
T cd05057 5 KETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREET--SPKANKEILDEAYVMASVDHPHVVRLLGICLS-S 81 (279)
T ss_pred CHHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-C
Confidence 35689999999999999999999876654 68999876542 24455678889999999999999999999887 7
Q ss_pred eEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 001847 746 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 825 (1005)
Q Consensus 746 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~ 825 (1005)
..++||||+.+++|.+++.... ..+++..+..++.||+.||+|||++|++|+||||+||+++.++.+||+|||++....
T Consensus 82 ~~~~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~ 160 (279)
T cd05057 82 QVQLITQLMPLGCLLDYVRNHK-DNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLD 160 (279)
T ss_pred ceEEEEecCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCccccccc
Confidence 8899999999999999987643 348999999999999999999999999999999999999999999999999986543
Q ss_pred CCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCC
Q 001847 826 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGK 904 (1005)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~Pf~~~ 904 (1005)
..... .......++..|+|||.+....++.++|||||||++|++++ |..||.+.
T Consensus 161 ~~~~~-------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~ 215 (279)
T cd05057 161 VDEKE-------------------------YHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGI 215 (279)
T ss_pred Ccccc-------------------------eecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCC
Confidence 11100 00011224568999999988888999999999999999998 99999888
Q ss_pred ChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHH
Q 001847 905 TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 954 (1005)
Q Consensus 905 ~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~e 954 (1005)
...+....+..+ ...+.....+..+.+++.+||..+|..||++.+.++.
T Consensus 216 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~ 264 (279)
T cd05057 216 PAVEIPDLLEKG-ERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINE 264 (279)
T ss_pred CHHHHHHHHhCC-CCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 776665555543 3334444567889999999999999999995544333
No 346
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=5.7e-33 Score=307.46 Aligned_cols=255 Identities=22% Similarity=0.339 Sum_probs=201.2
Q ss_pred CCccccccccccCcEEEEEEEE----cCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC--C
Q 001847 672 QHFRPIKPLGSGDTGSVHLVEL----CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--T 745 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~----~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~--~ 745 (1005)
.-|++++.||+|+||.||++.. ..++..||+|.++... .......+.+|+.+++.++||||+++++++... .
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGN 81 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc--cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCC
Confidence 4589999999999999999984 4568899999987542 234456788999999999999999999988765 5
Q ss_pred eEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 001847 746 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 825 (1005)
Q Consensus 746 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~ 825 (1005)
..++||||++|++|.+++.... ..++...+..++.||+.||+|||++|++||||||+||+++.++.++|+|||++....
T Consensus 82 ~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05079 82 GIKLIMEFLPSGSLKEYLPRNK-NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 160 (284)
T ss_pred ceEEEEEccCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccc
Confidence 7899999999999999986542 358999999999999999999999999999999999999999999999999985432
Q ss_pred CCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001847 826 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 905 (1005)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~ 905 (1005)
..... ........++..|+|||++.+..++.++|||||||++|+|++++.|+....
T Consensus 161 ~~~~~------------------------~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~ 216 (284)
T cd05079 161 TDKEY------------------------YTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPM 216 (284)
T ss_pred cCccc------------------------eeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCcccc
Confidence 11100 001123456778999999988888999999999999999999876653211
Q ss_pred --------------hHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHc
Q 001847 906 --------------RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 957 (1005)
Q Consensus 906 --------------~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 957 (1005)
...............+....++..+.+|+.+||+.+|++||+ +.++++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~il~ 278 (284)
T cd05079 217 TLFLKMIGPTHGQMTVTRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTT----FQNLIE 278 (284)
T ss_pred chhhhhcccccccccHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcC----HHHHHH
Confidence 111111222233334444557889999999999999999999 666654
No 347
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=5.4e-33 Score=307.05 Aligned_cols=253 Identities=30% Similarity=0.479 Sum_probs=205.9
Q ss_pred ccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCeEEEEEe
Q 001847 674 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCLITD 752 (1005)
Q Consensus 674 y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~lV~E 752 (1005)
|++.+.||+|++|.||+|.+..+++.+++|.+..... . .......+|+..++++. |+||+++++++..++..|+|||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~-~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 78 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFY-S-WEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFE 78 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhcc-c-hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEe
Confidence 6788999999999999999988899999998875422 1 22234456888999998 9999999999999999999999
Q ss_pred ccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001847 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (1005)
Q Consensus 753 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 832 (1005)
|+ +++|.+++.......++...+..++.||+.+|.|||++|++|+||+|+||+++.++.++|+|||.+......
T Consensus 79 ~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~----- 152 (283)
T cd07830 79 YM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSR----- 152 (283)
T ss_pred cC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCC-----
Confidence 99 889999887765456899999999999999999999999999999999999999999999999988543211
Q ss_pred CcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001847 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 911 (1005)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~ 911 (1005)
.......++..|+|||++.. ..++.++|+||||+++|+|++|+.||........+.
T Consensus 153 -----------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~ 209 (283)
T cd07830 153 -----------------------PPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLY 209 (283)
T ss_pred -----------------------CCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHH
Confidence 01122457889999998754 456889999999999999999999998776655544
Q ss_pred HHHhCC-----------------C--CCCC---------CCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCC
Q 001847 912 NILHKD-----------------L--KFPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 961 (1005)
Q Consensus 912 ~i~~~~-----------------~--~~~~---------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff 961 (1005)
.+...- . .++. ....+..+.+||.+||+.+|++||+ +++++.||||
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt----~~ei~~~~~~ 283 (283)
T cd07830 210 KICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPT----ASQALQHPYF 283 (283)
T ss_pred HHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCC----HHHHhhCCCC
Confidence 433210 0 0000 0123567899999999999999999 9999999997
No 348
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=4.6e-33 Score=307.16 Aligned_cols=254 Identities=28% Similarity=0.469 Sum_probs=209.7
Q ss_pred ccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEec
Q 001847 674 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 753 (1005)
Q Consensus 674 y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~ 753 (1005)
|++.+.||+|++|.||++.+..+++.|++|.+.... ........+..|+.+++.++|+||+++++++...+..++||||
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 79 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDN-EEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEY 79 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEecccc-ccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecC
Confidence 677889999999999999999999999999998653 2233446677899999999999999999999999999999999
Q ss_pred cCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCC
Q 001847 754 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 833 (1005)
Q Consensus 754 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~ 833 (1005)
+. ++|.+++.... ..+++..+..++.|++.||.|||++||+|+||+|+||+++.++.++|+|||.+.......
T Consensus 80 ~~-~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~----- 152 (282)
T cd07829 80 CD-MDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPL----- 152 (282)
T ss_pred cC-cCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCc-----
Confidence 96 68999997643 359999999999999999999999999999999999999999999999999885432110
Q ss_pred cchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001847 834 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 912 (1005)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~~ 912 (1005)
.......++..|+|||.+... .++.++|||||||++|+|++|..||.+......+..
T Consensus 153 ----------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~ 210 (282)
T cd07829 153 ----------------------RTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFK 210 (282)
T ss_pred ----------------------cccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHH
Confidence 011223467789999998776 788899999999999999999999988776655554
Q ss_pred HHhC------------------CCCCCC---------CCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCC
Q 001847 913 ILHK------------------DLKFPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 961 (1005)
Q Consensus 913 i~~~------------------~~~~~~---------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff 961 (1005)
+... ...++. ....+..+.++|.+||..+|.+||+ +.+++.||||
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~----~~~~l~~p~~ 282 (282)
T cd07829 211 IFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRIS----AKEALKHPYF 282 (282)
T ss_pred HHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCC----HHHHhhCcCC
Confidence 4321 000110 1124668999999999999999999 9999999998
No 349
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=7.8e-34 Score=337.99 Aligned_cols=273 Identities=28% Similarity=0.425 Sum_probs=208.9
Q ss_pred ccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEe------
Q 001847 670 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT------ 743 (1005)
Q Consensus 670 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~------ 743 (1005)
...+|+.+..||+||||.||+|+++-+|+.||||.+.... .......+.+|+.++.+|+|||||+++..+.+
T Consensus 477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~--s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~ 554 (1351)
T KOG1035|consen 477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA--SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT 554 (1351)
T ss_pred HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch--HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence 3568999999999999999999999999999999987653 56667889999999999999999999843210
Q ss_pred --------------------------------------------------------------------------------
Q 001847 744 -------------------------------------------------------------------------------- 743 (1005)
Q Consensus 744 -------------------------------------------------------------------------------- 743 (1005)
T Consensus 555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS 634 (1351)
T KOG1035|consen 555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS 634 (1351)
T ss_pred cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence
Q ss_pred -------------------------C--------CeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHH
Q 001847 744 -------------------------K--------THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYL 790 (1005)
Q Consensus 744 -------------------------~--------~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~L 790 (1005)
+ ..+||-||||+..+|.+++..+.... .....+.++++|++||+|+
T Consensus 635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~-~~d~~wrLFreIlEGLaYI 713 (1351)
T KOG1035|consen 635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS-QRDEAWRLFREILEGLAYI 713 (1351)
T ss_pred ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch-hhHHHHHHHHHHHHHHHHH
Confidence 0 12799999999999999998764321 4678899999999999999
Q ss_pred HHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccc-ccccccccccCCcccc
Q 001847 791 HCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAE-PMRASNSFVGTEEYIA 869 (1005)
Q Consensus 791 H~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gt~~y~a 869 (1005)
|++|||||||||.|||+++++.|||+|||+|....-.... ............+ +....++.+||..|+|
T Consensus 714 H~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~----------~d~~~~~~~~~~g~~~~~~Ts~VGTalYvA 783 (1351)
T KOG1035|consen 714 HDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLES----------IDQDLSFSTNRAGSNDGDLTSQVGTALYVA 783 (1351)
T ss_pred HhCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhh----------HhhccCccccccCCCCcccccccceeeeec
Confidence 9999999999999999999999999999999652100000 0000000011111 2224567799999999
Q ss_pred cccccCCC---CCChhhHHHHHHHHHHHHcCCCCCCCC-ChHHHHHHHHhCCCCCCCC--CCCCHHHHHHHHHccccCcC
Q 001847 870 PEIIAGAG---HTSAVDWWALGILLYEMLYGYTPFRGK-TRQKTFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPK 943 (1005)
Q Consensus 870 PE~l~~~~---~~~~sDIwSlGvll~eLltG~~Pf~~~-~~~~~~~~i~~~~~~~~~~--~~~s~~l~~Ll~~~L~~dP~ 943 (1005)
||++.+.. |+.|+|+||||++++||+. ||... .....+..+..+.++.+.. .+.-+.-..+|.+||+.||.
T Consensus 784 PEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~ 860 (1351)
T KOG1035|consen 784 PELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPS 860 (1351)
T ss_pred HHHhcccccccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCc
Confidence 99997754 8899999999999999984 56543 2234444444455555511 11223456899999999999
Q ss_pred ccCCChhcHHHHHcCCCCC
Q 001847 944 SRLGSHEGANEIKKHPFFK 962 (1005)
Q Consensus 944 ~Rpt~~~~a~elL~hpff~ 962 (1005)
+||| |.+||++.||-
T Consensus 861 kRPt----A~eLL~s~llp 875 (1351)
T KOG1035|consen 861 KRPT----ATELLNSELLP 875 (1351)
T ss_pred cCCC----HHHHhhccCCC
Confidence 9999 99999999998
No 350
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=1.1e-32 Score=299.63 Aligned_cols=251 Identities=24% Similarity=0.369 Sum_probs=209.3
Q ss_pred ccccccccccCcEEEEEEEEcCCC----eEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 001847 674 FRPIKPLGSGDTGSVHLVELCGSG----QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 749 (1005)
Q Consensus 674 y~~~~~LG~G~~g~Vy~a~~~~~~----~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 749 (1005)
+.+.+.||.|+||.||++.+...+ ..+|+|.+.... .......+..|+.+++.++|+||+++++++...+..|+
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 78 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDA--DEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMI 78 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCC--ChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEE
Confidence 456789999999999999997766 899999986542 22256788889999999999999999999999999999
Q ss_pred EEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 001847 750 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 829 (1005)
Q Consensus 750 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~ 829 (1005)
+|||+++++|.+++.......+++..+..++.||+.||.|||+.|++|+||||+||++++++.++|+|||++........
T Consensus 79 i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~ 158 (258)
T smart00219 79 VMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDY 158 (258)
T ss_pred EEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceecccccc
Confidence 99999999999999765333389999999999999999999999999999999999999999999999999855431100
Q ss_pred CCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHH
Q 001847 830 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQK 908 (1005)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~Pf~~~~~~~ 908 (1005)
. ......+++.|+|||.+....++.++|||||||++|+|++ |..||...+...
T Consensus 159 ~--------------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~ 212 (258)
T smart00219 159 Y--------------------------KKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEE 212 (258)
T ss_pred c--------------------------ccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 0 0001226789999999988888999999999999999998 899998877777
Q ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHc
Q 001847 909 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 957 (1005)
Q Consensus 909 ~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 957 (1005)
....+...... ......+..+.+++.+||..+|++||| +.++++
T Consensus 213 ~~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~~p~~Rpt----~~~ll~ 256 (258)
T smart00219 213 VLEYLKKGYRL-PKPENCPPEIYKLMLQCWAEDPEDRPT----FSELVE 256 (258)
T ss_pred HHHHHhcCCCC-CCCCcCCHHHHHHHHHHCcCChhhCcC----HHHHHh
Confidence 77666655432 233347889999999999999999999 777765
No 351
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=1.9e-32 Score=296.94 Aligned_cols=245 Identities=23% Similarity=0.349 Sum_probs=199.3
Q ss_pred ccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCC
Q 001847 678 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGG 757 (1005)
Q Consensus 678 ~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~gg 757 (1005)
+.||+|+||.||++.. .++..+|+|.++... .......+.+|+.+++.++||||+++++++...+..++||||++++
T Consensus 1 ~~ig~g~~g~vy~~~~-~~~~~~a~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 77 (250)
T cd05085 1 ELLGKGNFGEVFKGTL-KDKTPVAVKTCKEDL--PQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGG 77 (250)
T ss_pred CccCCCCCceEEEEEe-cCCcEEEEEecCCcC--CHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCC
Confidence 3689999999999986 468899999887542 2334456888999999999999999999999999999999999999
Q ss_pred chhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchh
Q 001847 758 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 837 (1005)
Q Consensus 758 sL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~ 837 (1005)
+|.+++.... ..+++..+..++.|++.+|.|||++|++|+||||+||+++.++.++|+|||++.......
T Consensus 78 ~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~--------- 147 (250)
T cd05085 78 DFLSFLRKKK-DELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGI--------- 147 (250)
T ss_pred cHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceeccccc---------
Confidence 9999987543 358899999999999999999999999999999999999999999999999885322100
Q ss_pred hhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHHHHHHHHhC
Q 001847 838 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILHK 916 (1005)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~Pf~~~~~~~~~~~i~~~ 916 (1005)
........+++.|+|||++....++.++||||||+++|++++ |..||.+.........+...
T Consensus 148 -----------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~ 210 (250)
T cd05085 148 -----------------YSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKG 210 (250)
T ss_pred -----------------cccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcC
Confidence 000111234567999999988888999999999999999998 99999887776666555443
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHH
Q 001847 917 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGAN 953 (1005)
Q Consensus 917 ~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~ 953 (1005)
. .......++..+.+|+.+||..+|++||++.++++
T Consensus 211 ~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 246 (250)
T cd05085 211 Y-RMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQK 246 (250)
T ss_pred C-CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 2 22233456789999999999999999999444333
No 352
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=1.4e-32 Score=298.06 Aligned_cols=246 Identities=26% Similarity=0.365 Sum_probs=201.8
Q ss_pred ccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCC
Q 001847 678 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGG 757 (1005)
Q Consensus 678 ~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~gg 757 (1005)
+.||.|++|.||++.+.. ++.|++|.+..... ......+.+|+.++++++|+||+++++++......++||||+.++
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~ 77 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLP--PDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGG 77 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCC--HHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCC
Confidence 468999999999999977 99999998876532 235567889999999999999999999999999999999999999
Q ss_pred chhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchh
Q 001847 758 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 837 (1005)
Q Consensus 758 sL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~ 837 (1005)
+|.+++.... ..++...+..++.+++.+|.|||++|++|+||||+||+++.++.++|+|||++.........
T Consensus 78 ~l~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~------- 149 (251)
T cd05041 78 SLLTFLRKKK-NRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYT------- 149 (251)
T ss_pred cHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcce-------
Confidence 9999986542 35889999999999999999999999999999999999999999999999988543210000
Q ss_pred hhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHHHHHHHHhC
Q 001847 838 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILHK 916 (1005)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~Pf~~~~~~~~~~~i~~~ 916 (1005)
.......++..|+|||.+.+..++.++|||||||++|+|++ |..||...........+...
T Consensus 150 ------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~ 211 (251)
T cd05041 150 ------------------VSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESG 211 (251)
T ss_pred ------------------eccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcC
Confidence 00011234567999999988888999999999999999998 89999877765555544432
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHc
Q 001847 917 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 957 (1005)
Q Consensus 917 ~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 957 (1005)
...+.....+..+.+|+.+||..+|.+||+ +.++++
T Consensus 212 -~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~ell~ 247 (251)
T cd05041 212 -YRMPAPQLCPEEIYRLMLQCWAYDPENRPS----FSEIYN 247 (251)
T ss_pred -CCCCCCccCCHHHHHHHHHHhccChhhCcC----HHHHHH
Confidence 333333456789999999999999999999 777664
No 353
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.3e-32 Score=303.64 Aligned_cols=255 Identities=19% Similarity=0.213 Sum_probs=207.1
Q ss_pred cccCCccccccccccCcEEEEEEEEcC----CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEe-
Q 001847 669 INLQHFRPIKPLGSGDTGSVHLVELCG----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT- 743 (1005)
Q Consensus 669 i~~~~y~~~~~LG~G~~g~Vy~a~~~~----~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~- 743 (1005)
+..++|++.+.||+|+||.||++.+.. ++..+++|.+... ........+.+|+.+++.++|+||+++++++..
T Consensus 3 ~~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~--~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~ 80 (280)
T cd05043 3 ISRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH--ASEIQVTLLLQESCLLYGLSHQNILPILHVCIED 80 (280)
T ss_pred cchhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC--CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC
Confidence 456789999999999999999999865 3578999987643 244556778899999999999999999998665
Q ss_pred CCeEEEEEeccCCCchhhHHhhCCC------CCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEe
Q 001847 744 KTHVCLITDYCPGGELFLLLDRQPT------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTD 817 (1005)
Q Consensus 744 ~~~~~lV~E~~~ggsL~~~l~~~~~------~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~D 817 (1005)
+...+++++|+.+++|.+++..... ..++...+..++.||+.||+|||++|++|+||||+||++++++.+||+|
T Consensus 81 ~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d 160 (280)
T cd05043 81 GEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITD 160 (280)
T ss_pred CCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECC
Confidence 5778999999999999999875322 4589999999999999999999999999999999999999999999999
Q ss_pred ccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-
Q 001847 818 FDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY- 896 (1005)
Q Consensus 818 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt- 896 (1005)
||++..+...... .......++..|+|||++.+..++.++|||||||++|++++
T Consensus 161 ~g~~~~~~~~~~~-------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~ 215 (280)
T cd05043 161 NALSRDLFPMDYH-------------------------CLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTL 215 (280)
T ss_pred CCCcccccCCceE-------------------------EeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcC
Confidence 9998643211100 00112245678999999988889999999999999999998
Q ss_pred CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhc
Q 001847 897 GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 951 (1005)
Q Consensus 897 G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~ 951 (1005)
|+.||...+.......+.. ...++....++..+.+++.+||+.+|++||++.++
T Consensus 216 g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~ 269 (280)
T cd05043 216 GQTPYVEIDPFEMAAYLKD-GYRLAQPINCPDELFAVMACCWALDPEERPSFSQL 269 (280)
T ss_pred CCCCcCcCCHHHHHHHHHc-CCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHH
Confidence 9999988776665544433 33334444567889999999999999999994443
No 354
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.3e-32 Score=302.10 Aligned_cols=252 Identities=24% Similarity=0.335 Sum_probs=204.9
Q ss_pred ccCCccccccccccCcEEEEEEEEcCC---CeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 001847 670 NLQHFRPIKPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 746 (1005)
Q Consensus 670 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~---~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 746 (1005)
...+|.+.+.||.|+||.||++.+... ...+++|...... .......+.+|+.+++.++||||+++++++.. ..
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~ 80 (270)
T cd05056 4 QREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT--SPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NP 80 (270)
T ss_pred chhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC--CHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CC
Confidence 346799999999999999999987544 4578999876542 24455678899999999999999999998875 55
Q ss_pred EEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 001847 747 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 826 (1005)
Q Consensus 747 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~ 826 (1005)
.|+||||+++++|.+++.... ..++...+..++.||+.||.|||+.|++|+||||+||+++.++.++|+|||++.....
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 159 (270)
T cd05056 81 VWIVMELAPLGELRSYLQVNK-YSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLED 159 (270)
T ss_pred cEEEEEcCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeeccc
Confidence 789999999999999997643 3589999999999999999999999999999999999999999999999998854321
Q ss_pred CCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCC
Q 001847 827 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKT 905 (1005)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~Pf~~~~ 905 (1005)
... .......+++.|+|||.+....++.++|||||||++|+|++ |..||.+..
T Consensus 160 ~~~--------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~ 213 (270)
T cd05056 160 ESY--------------------------YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVK 213 (270)
T ss_pred ccc--------------------------eecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCC
Confidence 100 00112234568999999988888999999999999999985 999998887
Q ss_pred hHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHH
Q 001847 906 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 956 (1005)
Q Consensus 906 ~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL 956 (1005)
..+....+..+. ..+....++..+.+|+.+||..+|++||+ +.+++
T Consensus 214 ~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~~~~ 259 (270)
T cd05056 214 NNDVIGRIENGE-RLPMPPNCPPTLYSLMTKCWAYDPSKRPR----FTELK 259 (270)
T ss_pred HHHHHHHHHcCC-cCCCCCCCCHHHHHHHHHHcCCChhhCcC----HHHHH
Confidence 776666555443 22334457889999999999999999999 55554
No 355
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-33 Score=315.75 Aligned_cols=252 Identities=26% Similarity=0.326 Sum_probs=198.0
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC-eEEE
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT-HVCL 749 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~-~~~l 749 (1005)
.+.|.....||+|+||.||++.... |..+|||.+....... ..++.+|+.++.+++|||+|++++||.+.+ ..+|
T Consensus 74 T~~Fs~~~~ig~Ggfg~VYkG~l~~-~~~vAVK~~~~~~~~~---~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~L 149 (361)
T KOG1187|consen 74 TNNFSESNLIGEGGFGTVYKGVLSD-GTVVAVKRLSSNSGQG---EREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLL 149 (361)
T ss_pred HhCCchhcceecCCCeEEEEEEECC-CCEEEEEEecCCCCcc---hhHHHHHHHHHhcCCCcCcccEEEEEecCCceEEE
Confidence 3678888999999999999999844 4899999877543211 455999999999999999999999999988 5999
Q ss_pred EEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC---cccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 001847 750 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG---IIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 826 (1005)
Q Consensus 750 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~g---IvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~ 826 (1005)
|+|||++|+|.+.+.......+++..+..|+.+++.||+|||... ||||||||+|||+|.+..+||+|||+|.....
T Consensus 150 VYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~ 229 (361)
T KOG1187|consen 150 VYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPE 229 (361)
T ss_pred EEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCc
Confidence 999999999999997654327899999999999999999999853 99999999999999999999999999954321
Q ss_pred -CCCCCCCcchhhhhcccCCCCCccccccccccccc-ccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001847 827 -KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSF-VGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 904 (1005)
Q Consensus 827 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~ 904 (1005)
... .... .||.+|++||++..+..+.++||||||++|+||++|+.+....
T Consensus 230 ~~~~----------------------------~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~ 281 (361)
T KOG1187|consen 230 GDTS----------------------------VSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQS 281 (361)
T ss_pred cccc----------------------------eeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCC
Confidence 100 0111 7999999999998888999999999999999999999887643
Q ss_pred C---h---HHHHHHHHh-CCC------CCCCCCCCC-----HHHHHHHHHccccCcCccCCChhcHHHH
Q 001847 905 T---R---QKTFANILH-KDL------KFPSSTPTS-----LHAKQLMYRLLHRDPKSRLGSHEGANEI 955 (1005)
Q Consensus 905 ~---~---~~~~~~i~~-~~~------~~~~~~~~s-----~~l~~Ll~~~L~~dP~~Rpt~~~~a~el 955 (1005)
. . .+-....+. +.+ .+.. ...+ ..+..+...|++.+|..||++.+++..+
T Consensus 282 ~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~-~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L 349 (361)
T KOG1187|consen 282 RPRGELSLVEWAKPLLEEGKLREIVDPRLKE-GEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKEL 349 (361)
T ss_pred CCcccccHHHHHHHHHHCcchhheeCCCccC-CCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHH
Confidence 2 1 111111111 111 1110 1122 2356788999999999999977765555
No 356
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.9e-32 Score=300.96 Aligned_cols=244 Identities=23% Similarity=0.329 Sum_probs=196.8
Q ss_pred ccccccCcEEEEEEEEcCCCe--EEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEEEEEecc
Q 001847 678 KPLGSGDTGSVHLVELCGSGQ--YFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYC 754 (1005)
Q Consensus 678 ~~LG~G~~g~Vy~a~~~~~~~--~valK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lV~E~~ 754 (1005)
+.||+|+||.||++.+..++. .+++|.++.. ........+.+|+.++.++ +||||+++++++...+.+|+||||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~ 78 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA 78 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEcccc--CCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeC
Confidence 358999999999999987775 4688877642 2334456788899999999 8999999999999999999999999
Q ss_pred CCCchhhHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccC
Q 001847 755 PGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 820 (1005)
Q Consensus 755 ~ggsL~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~ 820 (1005)
++++|.+++.... ...++...+..++.|++.||+|||++|++|+||||+||+++.++.+||+|||+
T Consensus 79 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl 158 (270)
T cd05047 79 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGL 158 (270)
T ss_pred CCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCC
Confidence 9999999987532 12478999999999999999999999999999999999999999999999998
Q ss_pred CcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCC
Q 001847 821 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYT 899 (1005)
Q Consensus 821 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~ 899 (1005)
+...... ........++.|+|||++....++.++|||||||++|+|++ |..
T Consensus 159 ~~~~~~~----------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~ 210 (270)
T cd05047 159 SRGQEVY----------------------------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGT 210 (270)
T ss_pred ccccchh----------------------------hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCC
Confidence 7321100 00011223567999999988888999999999999999996 999
Q ss_pred CCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcH
Q 001847 900 PFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGA 952 (1005)
Q Consensus 900 Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a 952 (1005)
||.+.+.......+... .........+..+.+|+.+||..+|.+||++.+++
T Consensus 211 pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il 262 (270)
T cd05047 211 PYCGMTCAELYEKLPQG-YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 262 (270)
T ss_pred CccccCHHHHHHHHhCC-CCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHH
Confidence 99887766666555443 22223334678899999999999999999944433
No 357
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=5.1e-33 Score=303.35 Aligned_cols=238 Identities=20% Similarity=0.305 Sum_probs=190.4
Q ss_pred ccccccCcEEEEEEEEcCCCe-------EEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001847 678 KPLGSGDTGSVHLVELCGSGQ-------YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 750 (1005)
Q Consensus 678 ~~LG~G~~g~Vy~a~~~~~~~-------~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 750 (1005)
+.||.|+||.||++.+...+. .+++|.+... .......+..|..+++.++||||+++++++......++|
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv 77 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS---HRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMV 77 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcch---hHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEE
Confidence 368999999999999865543 4888877543 234456778899999999999999999999998999999
Q ss_pred EeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCc--------EEEEeccCCc
Q 001847 751 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH--------VSLTDFDLSC 822 (1005)
Q Consensus 751 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~--------vkL~DFG~a~ 822 (1005)
|||+.+++|..++.... ..+++..+..++.||+.||+|||++||+||||||+||+++.++. ++++|||.+.
T Consensus 78 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~ 156 (258)
T cd05078 78 QEYVKFGSLDTYLKKNK-NLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI 156 (258)
T ss_pred EecCCCCcHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEeccccccc
Confidence 99999999999997643 35899999999999999999999999999999999999987765 6999999874
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCC-CC
Q 001847 823 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGY-TP 900 (1005)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlGvll~eLltG~-~P 900 (1005)
... ......+++.|+|||++.+. .++.++|||||||++|+|++|. .|
T Consensus 157 ~~~-------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~ 205 (258)
T cd05078 157 TVL-------------------------------PKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKP 205 (258)
T ss_pred ccC-------------------------------CchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCC
Confidence 321 01224578899999999764 4788999999999999999984 66
Q ss_pred CCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHc
Q 001847 901 FRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 957 (1005)
Q Consensus 901 f~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 957 (1005)
|......... ........++. ..+.++.+||.+||+.+|++||+ ++++++
T Consensus 206 ~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~li~~~l~~~p~~Rps----~~~il~ 255 (258)
T cd05078 206 LSALDSQKKL-QFYEDRHQLPA--PKWTELANLINQCMDYEPDFRPS----FRAIIR 255 (258)
T ss_pred hhhccHHHHH-HHHHccccCCC--CCcHHHHHHHHHHhccChhhCCC----HHHHHH
Confidence 6555444332 23333333332 35678999999999999999999 777665
No 358
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=5.8e-33 Score=299.08 Aligned_cols=233 Identities=32% Similarity=0.476 Sum_probs=189.4
Q ss_pred cCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCCchhhH
Q 001847 683 GDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGELFLL 762 (1005)
Q Consensus 683 G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ggsL~~~ 762 (1005)
|.++.||+|.+..+++.||+|.+.... ....+...+....||||+++++++...+.+|+||||+.+++|.++
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~--------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS--------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSH 75 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh--------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHH
Confidence 899999999999999999999987642 222344445556799999999999999999999999999999999
Q ss_pred HhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcc
Q 001847 763 LDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRH 842 (1005)
Q Consensus 763 l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~ 842 (1005)
+... ..+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||.+......
T Consensus 76 l~~~--~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~--------------- 138 (237)
T cd05576 76 ISKF--LNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS--------------- 138 (237)
T ss_pred HHHh--cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccc---------------
Confidence 8764 34899999999999999999999999999999999999999999999999976432210
Q ss_pred cCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCCCCC
Q 001847 843 KGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPS 922 (1005)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~~i~~~~~~~~~ 922 (1005)
.....++..|+|||.+....++.++|+||+||++|+|++|..||...... ......+..
T Consensus 139 ---------------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~------~~~~~~~~~ 197 (237)
T cd05576 139 ---------------CDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG------INTHTTLNI 197 (237)
T ss_pred ---------------cccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh------cccccccCC
Confidence 11234567799999998888899999999999999999999887543211 011111112
Q ss_pred CCCCCHHHHHHHHHccccCcCccCCCh-hcHHHHHcCCCC
Q 001847 923 STPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFF 961 (1005)
Q Consensus 923 ~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~hpff 961 (1005)
...++..+.+||.+||+.||.+||+.. ..++++++||||
T Consensus 198 ~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 198 PEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred cccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence 233678899999999999999999953 236999999998
No 359
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=1.7e-32 Score=306.89 Aligned_cols=256 Identities=22% Similarity=0.340 Sum_probs=204.2
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCe----EEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 001847 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQ----YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 744 (1005)
Q Consensus 669 i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~----~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 744 (1005)
+...+|+.++.||+|+||.||++.+..++. .+|+|.+.... .......+.+|+.+++.++||||+++++++...
T Consensus 4 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~ 81 (303)
T cd05110 4 LKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT--GPKANVEFMDEALIMASMDHPHLVRLLGVCLSP 81 (303)
T ss_pred cchhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC
Confidence 345689999999999999999999877765 56888876432 233344678899999999999999999988754
Q ss_pred CeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCccc
Q 001847 745 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 824 (1005)
Q Consensus 745 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~ 824 (1005)
..++++||+++|+|.+++... ...+++..+..++.||+.||.|||++||+|+||||+||+++.++.+||+|||++...
T Consensus 82 -~~~~v~e~~~~g~l~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~ 159 (303)
T cd05110 82 -TIQLVTQLMPHGCLLDYVHEH-KDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLL 159 (303)
T ss_pred -CceeeehhcCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccc
Confidence 467999999999999998754 235889999999999999999999999999999999999999999999999998654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCC
Q 001847 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 903 (1005)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~Pf~~ 903 (1005)
...... .......++..|+|||.+.+..++.++|||||||++|+|++ |..||.+
T Consensus 160 ~~~~~~-------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~ 214 (303)
T cd05110 160 EGDEKE-------------------------YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDG 214 (303)
T ss_pred cCcccc-------------------------cccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 211100 01112345778999999988889999999999999999997 9999987
Q ss_pred CChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHH
Q 001847 904 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 954 (1005)
Q Consensus 904 ~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~e 954 (1005)
...... ..++.....++.....+..+.+++.+||..+|++||++.+++..
T Consensus 215 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~ 264 (303)
T cd05110 215 IPTREI-PDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAE 264 (303)
T ss_pred CCHHHH-HHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 655443 34444444444445567889999999999999999995554443
No 360
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=1.2e-32 Score=301.82 Aligned_cols=245 Identities=22% Similarity=0.304 Sum_probs=198.0
Q ss_pred ccccccCcEEEEEEEEcCCC------eEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 678 KPLGSGDTGSVHLVELCGSG------QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 678 ~~LG~G~~g~Vy~a~~~~~~------~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
+.||.|+||.||++.+.... ..+++|.+.... .......+.+|+.+++.++||||+++++++...+..|+||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA--TDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIM 78 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhccc--chhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEE
Confidence 36899999999999986543 789999886542 2234567888999999999999999999999999999999
Q ss_pred eccCCCchhhHHhhC-----CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCC-----cEEEEeccCC
Q 001847 752 DYCPGGELFLLLDRQ-----PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-----HVSLTDFDLS 821 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~-----~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g-----~vkL~DFG~a 821 (1005)
||+++++|.+++... ....++...+..++.||+.||.|||+++++|+||||+||+++.++ .++|+|||++
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~ 158 (269)
T cd05044 79 ELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLA 158 (269)
T ss_pred eccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccc
Confidence 999999999998753 223478899999999999999999999999999999999999887 8999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCC
Q 001847 822 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTP 900 (1005)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~P 900 (1005)
........ ........++..|+|||++.+..++.++|||||||++|+|++ |..|
T Consensus 159 ~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p 213 (269)
T cd05044 159 RDIYKSDY-------------------------YRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQP 213 (269)
T ss_pred cccccccc-------------------------cccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCC
Confidence 54321100 001122345678999999998889999999999999999998 9999
Q ss_pred CCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChh
Q 001847 901 FRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 950 (1005)
Q Consensus 901 f~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~ 950 (1005)
|...+..+....+.... ........+..+.+||.+||..+|.+||++.+
T Consensus 214 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ 262 (269)
T cd05044 214 YPALNNQEVLQHVTAGG-RLQKPENCPDKIYQLMTNCWAQDPSERPTFDR 262 (269)
T ss_pred CcccCHHHHHHHHhcCC-ccCCcccchHHHHHHHHHHcCCCcccCCCHHH
Confidence 98877766555544332 22333446788999999999999999999433
No 361
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=2.6e-32 Score=299.35 Aligned_cols=250 Identities=24% Similarity=0.352 Sum_probs=205.8
Q ss_pred CccccccccccCcEEEEEEEEcC-CCeEEEEEEeecccc-------cChHHHHHHHHHHHHHHh-CCCCCcceEEEEEEe
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCG-SGQYFAMKAMDKGVM-------LNRNKVHRACAEREILDM-LDHPFVPALYASFQT 743 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~-~~~~valK~~~~~~~-------~~~~~~~~~~~E~~il~~-l~hpnIv~l~~~~~~ 743 (1005)
.|++.+.||+|+||.||++.+.. +++.+|+|.+..... ........+.+|+.++.+ ++||||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 48899999999999999999977 678999998864321 123344567788888865 699999999999999
Q ss_pred CCeEEEEEeccCCCchhhHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHH-cCcccCCCCCCcEEEecCCcEEEEeccC
Q 001847 744 KTHVCLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDL 820 (1005)
Q Consensus 744 ~~~~~lV~E~~~ggsL~~~l~~--~~~~~l~~~~i~~i~~qil~aL~~LH~-~gIvHrDLkP~NILi~~~g~vkL~DFG~ 820 (1005)
.+..|+||||+.+++|.+++.. .....+++..++.++.|++.+|.|||+ .|++|+||+|+||++++++.++|+|||.
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~ 160 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGL 160 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccc
Confidence 9999999999999999988753 223468999999999999999999996 6899999999999999999999999999
Q ss_pred CcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCC
Q 001847 821 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP 900 (1005)
Q Consensus 821 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~P 900 (1005)
+....... ......|+..|++||.+.+..++.++|+||||+++|+|++|+.|
T Consensus 161 ~~~~~~~~----------------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p 212 (269)
T cd08528 161 AKQKQPES----------------------------KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPP 212 (269)
T ss_pred eeeccccc----------------------------ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCc
Confidence 85432110 11234688899999999888889999999999999999999999
Q ss_pred CCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChh
Q 001847 901 FRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 950 (1005)
Q Consensus 901 f~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~ 950 (1005)
|...........+.............+..+.+||.+||+.||++||++.+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e 262 (269)
T cd08528 213 FYSTNMLSLATKIVEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQ 262 (269)
T ss_pred ccccCHHHHHHHHhhccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHH
Confidence 98877766666665554433233356789999999999999999999444
No 362
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6e-33 Score=335.11 Aligned_cols=257 Identities=21% Similarity=0.336 Sum_probs=216.2
Q ss_pred ccCCccccccccccCcEEEEEEEEcCCC-----eEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 001847 670 NLQHFRPIKPLGSGDTGSVHLVELCGSG-----QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 744 (1005)
Q Consensus 670 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~-----~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 744 (1005)
......+.+.||+|+||.||.+....-. ..||+|.+.+. .+.....+|.+|..+|+.++|||||++++++...
T Consensus 690 ~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~--~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~ 767 (1025)
T KOG1095|consen 690 PRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRL--SSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDS 767 (1025)
T ss_pred ChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEecccc--CCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCC
Confidence 3456778899999999999999985443 34899988764 4677888999999999999999999999999999
Q ss_pred CeEEEEEeccCCCchhhHHhhC-----CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEecc
Q 001847 745 THVCLITDYCPGGELFLLLDRQ-----PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFD 819 (1005)
Q Consensus 745 ~~~~lV~E~~~ggsL~~~l~~~-----~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG 819 (1005)
...+|++|||+||+|..+++.. ....++...+..++.||++|+.||+++++|||||-..|+|++....|||+|||
T Consensus 768 ~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFG 847 (1025)
T KOG1095|consen 768 GPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFG 847 (1025)
T ss_pred CCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccc
Confidence 9999999999999999999864 12458999999999999999999999999999999999999999999999999
Q ss_pred CCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CC
Q 001847 820 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GY 898 (1005)
Q Consensus 820 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~ 898 (1005)
+|+.+....- .+ ....-.-...|||||.+....++.++|||||||+|||+++ |.
T Consensus 848 lArDiy~~~y----------yr---------------~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~ 902 (1025)
T KOG1095|consen 848 LARDIYDKDY----------YR---------------KHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGA 902 (1025)
T ss_pred hhHhhhhchh----------ee---------------ccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCC
Confidence 9974321110 00 0011123458999999999999999999999999999997 99
Q ss_pred CCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHH
Q 001847 899 TPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 954 (1005)
Q Consensus 899 ~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~e 954 (1005)
.||.+.++.+.+...+.+. .++....++..+.+++..||+.+|++||+|...+++
T Consensus 903 ~PY~~~~n~~v~~~~~~gg-RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q 957 (1025)
T KOG1095|consen 903 TPYPSRSNFEVLLDVLEGG-RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQ 957 (1025)
T ss_pred CCCCCcchHHHHHHHHhCC-ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhh
Confidence 9999999998888676655 555566688889999999999999999997655553
No 363
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=4.5e-32 Score=297.65 Aligned_cols=245 Identities=21% Similarity=0.315 Sum_probs=189.8
Q ss_pred ccccccCcEEEEEEEEcC--CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccC
Q 001847 678 KPLGSGDTGSVHLVELCG--SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCP 755 (1005)
Q Consensus 678 ~~LG~G~~g~Vy~a~~~~--~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ 755 (1005)
+.||+|+||.||++.... ....+++|.+.... .......+.+|+.+++.++|+||+++++++.....+|+||||+.
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~ 78 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASA--TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCP 78 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccC--ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCC
Confidence 368999999999997533 34578888776432 23344567889999999999999999999999999999999999
Q ss_pred CCchhhHHhhCCC---CCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001847 756 GGELFLLLDRQPT---KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (1005)
Q Consensus 756 ggsL~~~l~~~~~---~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 832 (1005)
+++|.+++..... ...+...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++........
T Consensus 79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~--- 155 (269)
T cd05042 79 LGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDY--- 155 (269)
T ss_pred CCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchh---
Confidence 9999999876422 2346788899999999999999999999999999999999999999999998743211100
Q ss_pred CcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-------CCCCChhhHHHHHHHHHHHHc-CCCCCCCC
Q 001847 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-------AGHTSAVDWWALGILLYEMLY-GYTPFRGK 904 (1005)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-------~~~~~~sDIwSlGvll~eLlt-G~~Pf~~~ 904 (1005)
........+++.|+|||++.. ..++.++|||||||++|+|++ |..||...
T Consensus 156 ----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~ 213 (269)
T cd05042 156 ----------------------YITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDL 213 (269)
T ss_pred ----------------------eeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcC
Confidence 001123346778999998743 345779999999999999998 88899887
Q ss_pred ChHHHHHHHHhC-CCCCCC---CCCCCHHHHHHHHHccccCcCccCCChh
Q 001847 905 TRQKTFANILHK-DLKFPS---STPTSLHAKQLMYRLLHRDPKSRLGSHE 950 (1005)
Q Consensus 905 ~~~~~~~~i~~~-~~~~~~---~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~ 950 (1005)
...+........ ...++. ....+..+.+++..|+ .||++||++.+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~ 262 (269)
T cd05042 214 SDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEE 262 (269)
T ss_pred CHHHHHHHHhhccCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHH
Confidence 776666555443 222222 2346778888999998 59999999333
No 364
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=5.9e-32 Score=295.26 Aligned_cols=249 Identities=19% Similarity=0.268 Sum_probs=195.0
Q ss_pred ccccccCcEEEEEEEEcC---CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEE-eCCeEEEEEec
Q 001847 678 KPLGSGDTGSVHLVELCG---SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ-TKTHVCLITDY 753 (1005)
Q Consensus 678 ~~LG~G~~g~Vy~a~~~~---~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~~lV~E~ 753 (1005)
+.||+|+||.||+|.+.. .+..+|+|.+... ........+.+|+.+++.++||||+++++++. .++..++||||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 78 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRI--TDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPY 78 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCcc--CCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEec
Confidence 468999999999998743 3467999987542 23445667888999999999999999999765 45678999999
Q ss_pred cCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCC
Q 001847 754 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 833 (1005)
Q Consensus 754 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~ 833 (1005)
+.+++|.+++.... ..++...+..++.||+.||.|||+.|++|+||||+|||+++++.+||+|||++.........
T Consensus 79 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~--- 154 (262)
T cd05058 79 MKHGDLRNFIRSET-HNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYY--- 154 (262)
T ss_pred CCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcce---
Confidence 99999999987543 34677888899999999999999999999999999999999999999999998543211100
Q ss_pred cchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHHHHHH
Q 001847 834 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFAN 912 (1005)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~Pf~~~~~~~~~~~ 912 (1005)
.........+++.|+|||.+....++.++|||||||++|+|++ |.+||...+.......
T Consensus 155 --------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~ 214 (262)
T cd05058 155 --------------------SVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVY 214 (262)
T ss_pred --------------------eecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 0011122346778999999988888999999999999999999 5667777666665555
Q ss_pred HHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHc
Q 001847 913 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 957 (1005)
Q Consensus 913 i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 957 (1005)
+..+. ..+.....+..+.+++.+||..+|++||+ +.++++
T Consensus 215 ~~~~~-~~~~~~~~~~~~~~li~~cl~~~p~~Rp~----~~~il~ 254 (262)
T cd05058 215 LLQGR-RLLQPEYCPDPLYEVMLSCWHPKPEMRPT----FSELVS 254 (262)
T ss_pred HhcCC-CCCCCCcCCHHHHHHHHHHcCCChhhCCC----HHHHHH
Confidence 54442 22223345778999999999999999999 555543
No 365
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=3e-32 Score=300.91 Aligned_cols=257 Identities=23% Similarity=0.335 Sum_probs=204.8
Q ss_pred cCCccccccccccCcEEEEEEEEc----CCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEe--C
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELC----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT--K 744 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~----~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~ 744 (1005)
...|++.+.||+|+||.||++.+. .++..+|+|.+...... .....+.+|+.+++.+.|+||+++++++.. .
T Consensus 3 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~ 80 (284)
T cd05038 3 KRHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE--QHRSDFEREIEILRTLDHENIVKYKGVCEKPGG 80 (284)
T ss_pred hhhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch--HHHHHHHHHHHHHHhCCCCChheEEeeeecCCC
Confidence 357899999999999999999864 34789999998765321 356788899999999999999999999877 5
Q ss_pred CeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCccc
Q 001847 745 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 824 (1005)
Q Consensus 745 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~ 824 (1005)
...|+||||+++++|.+++.... ..++...+..++.||+.||+|||++|++|+||||+||+++.++.++|+|||.+...
T Consensus 81 ~~~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05038 81 RSLRLIMEYLPSGSLRDYLQRHR-DQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVL 159 (284)
T ss_pred CceEEEEecCCCCCHHHHHHhCc-cccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEccccccccc
Confidence 68999999999999999997653 25899999999999999999999999999999999999999999999999998654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001847 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 904 (1005)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~ 904 (1005)
...... ........++..|++||.+....++.++|||||||++|+|++|..||...
T Consensus 160 ~~~~~~------------------------~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~ 215 (284)
T cd05038 160 PEDKDY------------------------YYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSP 215 (284)
T ss_pred ccCCcc------------------------eeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccc
Confidence 311110 00011123456799999998888899999999999999999999998653
Q ss_pred Ch--------------HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHH
Q 001847 905 TR--------------QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 954 (1005)
Q Consensus 905 ~~--------------~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~e 954 (1005)
.. .......+......+....++..+.+|+.+||..+|.+||++.+++++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 279 (284)
T cd05038 216 PAEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILI 279 (284)
T ss_pred cchhccccccccccccHHHHHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence 22 122233344444455455567889999999999999999994444333
No 366
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=5.9e-32 Score=296.78 Aligned_cols=247 Identities=22% Similarity=0.318 Sum_probs=191.1
Q ss_pred ccccccCcEEEEEEEEc--CCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccC
Q 001847 678 KPLGSGDTGSVHLVELC--GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCP 755 (1005)
Q Consensus 678 ~~LG~G~~g~Vy~a~~~--~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ 755 (1005)
+.||+|+||.||++... .++..+++|.++... .......+.+|+.+++.++||||+++++++.....+|+||||++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 78 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSA--SVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCP 78 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCC--ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCC
Confidence 36899999999999864 345789999887542 22334567889999999999999999999999899999999999
Q ss_pred CCchhhHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001847 756 GGELFLLLDRQP---TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (1005)
Q Consensus 756 ggsL~~~l~~~~---~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 832 (1005)
+++|.+++.... ....+...+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++........
T Consensus 79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~--- 155 (269)
T cd05087 79 LGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDY--- 155 (269)
T ss_pred CCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcce---
Confidence 999999987532 12456778889999999999999999999999999999999999999999998853221100
Q ss_pred CcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-------CCCChhhHHHHHHHHHHHHc-CCCCCCCC
Q 001847 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-------GHTSAVDWWALGILLYEMLY-GYTPFRGK 904 (1005)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-------~~~~~sDIwSlGvll~eLlt-G~~Pf~~~ 904 (1005)
........+++.|+|||++... .++.++|||||||++|+|++ |..||...
T Consensus 156 ----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~ 213 (269)
T cd05087 156 ----------------------YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHL 213 (269)
T ss_pred ----------------------eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCC
Confidence 0111234578889999998542 34679999999999999996 99999876
Q ss_pred ChHHHHHHHHh-CCCCCCCC---CCCCHHHHHHHHHccccCcCccCCChhcHHHHH
Q 001847 905 TRQKTFANILH-KDLKFPSS---TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 956 (1005)
Q Consensus 905 ~~~~~~~~i~~-~~~~~~~~---~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL 956 (1005)
...+....... .....+.. ...+..+.+++.+|+ .+|++||+ +.+|+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt----~~~l~ 264 (269)
T cd05087 214 SDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPS----AEEVH 264 (269)
T ss_pred ChHHHHHHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCC----HHHHH
Confidence 66554433332 22222221 235678899999998 68999999 55554
No 367
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=100.00 E-value=2.6e-33 Score=278.10 Aligned_cols=253 Identities=25% Similarity=0.408 Sum_probs=208.9
Q ss_pred ccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeC--Ce
Q 001847 670 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTK--TH 746 (1005)
Q Consensus 670 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~--~~ 746 (1005)
..++|++++.+|+|.+|.||.+.+..++..++||++++ -..+.+.+|++||..|. ||||+++++...+. ..
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKP------VkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Skt 109 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKP------VKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKT 109 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeech------HHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccC
Confidence 35789999999999999999999999999999998874 35678899999999995 99999999998764 46
Q ss_pred EEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecC-CcEEEEeccCCcccC
Q 001847 747 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDLSCLTS 825 (1005)
Q Consensus 747 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~-g~vkL~DFG~a~~~~ 825 (1005)
..+|+||+++.+...+... ++...++.++.+|+.||.|+|++||+|||+||.|++|+.. -.++|+|+|+|....
T Consensus 110 paLiFE~v~n~Dfk~ly~t-----l~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYH 184 (338)
T KOG0668|consen 110 PSLIFEYVNNTDFKQLYPT-----LTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH 184 (338)
T ss_pred chhHhhhhccccHHHHhhh-----hchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcC
Confidence 7899999999998888755 8889999999999999999999999999999999999954 579999999996543
Q ss_pred CCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCC-C
Q 001847 826 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFR-G 903 (1005)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlGvll~eLltG~~Pf~-~ 903 (1005)
+. ..-+..+.+..|-.||.+.. ..+++.-|+|||||++..|++.+.||. |
T Consensus 185 p~----------------------------~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG 236 (338)
T KOG0668|consen 185 PG----------------------------KEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHG 236 (338)
T ss_pred CC----------------------------ceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCC
Confidence 21 12234567888999999866 457889999999999999999888874 5
Q ss_pred CChHHHHHHHHhC-------------CC----------------CCC-----CC-CCCCHHHHHHHHHccccCcCccCCC
Q 001847 904 KTRQKTFANILHK-------------DL----------------KFP-----SS-TPTSLHAKQLMYRLLHRDPKSRLGS 948 (1005)
Q Consensus 904 ~~~~~~~~~i~~~-------------~~----------------~~~-----~~-~~~s~~l~~Ll~~~L~~dP~~Rpt~ 948 (1005)
.++.+++.+|.+- .+ +|. .. .-.++++.+||.++|..|.++|+|
T Consensus 237 ~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlT- 315 (338)
T KOG0668|consen 237 HDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLT- 315 (338)
T ss_pred CCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccc-
Confidence 5555555555320 01 111 11 124678999999999999999999
Q ss_pred hhcHHHHHcCCCCCCCC
Q 001847 949 HEGANEIKKHPFFKGVN 965 (1005)
Q Consensus 949 ~~~a~elL~hpff~~~~ 965 (1005)
|+|++.||||..+-
T Consensus 316 ---akEam~HpyF~~~~ 329 (338)
T KOG0668|consen 316 ---AKEAMAHPYFAPVR 329 (338)
T ss_pred ---hHHHhcCchHHHHH
Confidence 99999999999753
No 368
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=6.5e-32 Score=296.78 Aligned_cols=253 Identities=23% Similarity=0.342 Sum_probs=201.1
Q ss_pred ccccccccccCcEEEEEEEEc---CCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC-----
Q 001847 674 FRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT----- 745 (1005)
Q Consensus 674 y~~~~~LG~G~~g~Vy~a~~~---~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~----- 745 (1005)
|++.+.||+|+||.||+|.+. .+++.+|||.+.... ........+.+|+.+++.++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 79 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADI-FSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRL 79 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEecccc-CChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcc
Confidence 678899999999999999864 357899999987643 23445677889999999999999999999886432
Q ss_pred -eEEEEEeccCCCchhhHHhhC----CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccC
Q 001847 746 -HVCLITDYCPGGELFLLLDRQ----PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 820 (1005)
Q Consensus 746 -~~~lV~E~~~ggsL~~~l~~~----~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~ 820 (1005)
..+++++|+.+++|.+++... ....++...++.++.||+.||+|||++||+|+||||+||+++.++.+||+|||+
T Consensus 80 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~ 159 (273)
T cd05074 80 PIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGL 159 (273)
T ss_pred cceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECcccc
Confidence 347899999999998887432 112478899999999999999999999999999999999999999999999998
Q ss_pred CcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCC
Q 001847 821 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYT 899 (1005)
Q Consensus 821 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~ 899 (1005)
+........ ........+++.|++||.+....++.++|||||||++|+|++ |+.
T Consensus 160 ~~~~~~~~~-------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~ 214 (273)
T cd05074 160 SKKIYSGDY-------------------------YRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQT 214 (273)
T ss_pred cccccCCcc-------------------------eecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCC
Confidence 864321110 001112345678999999988888999999999999999998 899
Q ss_pred CCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHc
Q 001847 900 PFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 957 (1005)
Q Consensus 900 Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 957 (1005)
||.+.........+.... ........+..+.+++.+||..+|++||+ +.++++
T Consensus 215 p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~p~~Rps----~~~~~~ 267 (273)
T cd05074 215 PYAGVENSEIYNYLIKGN-RLKQPPDCLEDVYELMCQCWSPEPKCRPS----FQHLRD 267 (273)
T ss_pred CCCCCCHHHHHHHHHcCC-cCCCCCCCCHHHHHHHHHHcCCChhhCcC----HHHHHH
Confidence 998877766665555442 22223346788999999999999999999 555543
No 369
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=6.6e-32 Score=297.52 Aligned_cols=238 Identities=19% Similarity=0.296 Sum_probs=188.3
Q ss_pred cccccCcEEEEEEEEcCC------------------------CeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCc
Q 001847 679 PLGSGDTGSVHLVELCGS------------------------GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFV 734 (1005)
Q Consensus 679 ~LG~G~~g~Vy~a~~~~~------------------------~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnI 734 (1005)
.||+|+||.||++....+ ...+++|.+... .......+.+|+.+++.++||||
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~ni 78 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPS---HRDIALAFFETASLMSQVSHIHL 78 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChH---HHHHHHHHHHHHHHHhcCCCCCe
Confidence 689999999999975322 235888887643 22344567888999999999999
Q ss_pred ceEEEEEEeCCeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCC---
Q 001847 735 PALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG--- 811 (1005)
Q Consensus 735 v~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g--- 811 (1005)
+++++++......|+||||+++++|..++... ...+++..+..++.||+.||.|||++||+||||||+|||++..+
T Consensus 79 v~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~ 157 (274)
T cd05076 79 AFVHGVCVRGSENIMVEEFVEHGPLDVCLRKE-KGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAE 157 (274)
T ss_pred eeEEEEEEeCCceEEEEecCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCccc
Confidence 99999999999999999999999999888653 34588999999999999999999999999999999999998644
Q ss_pred ----cEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHH
Q 001847 812 ----HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWA 886 (1005)
Q Consensus 812 ----~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwS 886 (1005)
.++|+|||.+..... .....++..|+|||.+.+ ..++.++||||
T Consensus 158 ~~~~~~kl~d~g~~~~~~~-------------------------------~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~s 206 (274)
T cd05076 158 GTSPFIKLSDPGVSFTALS-------------------------------REERVERIPWIAPECVPGGNSLSTAADKWS 206 (274)
T ss_pred CccceeeecCCcccccccc-------------------------------ccccccCCcccCchhhcCCCCCCcHHHHHH
Confidence 489999998743210 011246778999998865 55788999999
Q ss_pred HHHHHHHHH-cCCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcC
Q 001847 887 LGILLYEML-YGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 958 (1005)
Q Consensus 887 lGvll~eLl-tG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~h 958 (1005)
|||++|+|+ +|..||.+....+.. .........+. ..+..+.+||.+||+.+|++||+ +.++|++
T Consensus 207 lG~~l~el~~~g~~p~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~li~~cl~~~p~~Rps----~~~il~~ 272 (274)
T cd05076 207 FGTTLLEICFDGEVPLKERTPSEKE-RFYEKKHRLPE--PSCKELATLISQCLTYEPTQRPS----FRTILRD 272 (274)
T ss_pred HHHHHHHHHhCCCCCccccChHHHH-HHHHhccCCCC--CCChHHHHHHHHHcccChhhCcC----HHHHHHh
Confidence 999999985 799999876654432 23333222332 24567899999999999999999 7777654
No 370
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=8.2e-32 Score=294.71 Aligned_cols=239 Identities=21% Similarity=0.304 Sum_probs=189.0
Q ss_pred ccccccCcEEEEEEEEcC------------CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 001847 678 KPLGSGDTGSVHLVELCG------------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 745 (1005)
Q Consensus 678 ~~LG~G~~g~Vy~a~~~~------------~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 745 (1005)
+.||.|+||.||++.... ....+++|.+... .......+..|+.+++.++||||+++++++....
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~ 77 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPS---HRDISLAFFETASMMRQVSHKHIVLLYGVCVRDV 77 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChh---hhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence 368999999999998532 2335888887643 2334456778899999999999999999999988
Q ss_pred eEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCc-------EEEEec
Q 001847 746 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH-------VSLTDF 818 (1005)
Q Consensus 746 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~-------vkL~DF 818 (1005)
..++||||+++++|..++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++. ++++||
T Consensus 78 ~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~ 156 (262)
T cd05077 78 ENIMVEEFVEFGPLDLFMHRK-SDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDP 156 (262)
T ss_pred CCEEEEecccCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCC
Confidence 999999999999998887654 345899999999999999999999999999999999999987664 899999
Q ss_pred cCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCccccccccc-CCCCCChhhHHHHHHHHHHHH-c
Q 001847 819 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-GAGHTSAVDWWALGILLYEML-Y 896 (1005)
Q Consensus 819 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~sDIwSlGvll~eLl-t 896 (1005)
|++..... .....++..|+|||.+. ...++.++|||||||++|+|+ .
T Consensus 157 g~~~~~~~-------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~ 205 (262)
T cd05077 157 GIPITVLS-------------------------------RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYN 205 (262)
T ss_pred CCCccccC-------------------------------cccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhC
Confidence 98743210 11235788899999986 456788999999999999998 5
Q ss_pred CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcC
Q 001847 897 GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 958 (1005)
Q Consensus 897 G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~h 958 (1005)
|..||......+. ......... ...+.+.++.+||.+||+.||.+||+ +.+|+++
T Consensus 206 ~~~p~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~li~~cl~~dp~~Rp~----~~~il~~ 260 (262)
T cd05077 206 GEIPLKDKTLAEK-ERFYEGQCM--LVTPSCKELADLMTHCMNYDPNQRPF----FRAIMRD 260 (262)
T ss_pred CCCCCCCcchhHH-HHHHhcCcc--CCCCChHHHHHHHHHHcCCChhhCcC----HHHHHHh
Confidence 8888876554333 223233222 22234578899999999999999999 6777654
No 371
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-32 Score=298.57 Aligned_cols=143 Identities=29% Similarity=0.431 Sum_probs=126.6
Q ss_pred hcccccccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-----C---CC
Q 001847 662 ILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-----H---PF 733 (1005)
Q Consensus 662 ~~~~~~~i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~-----h---pn 733 (1005)
.+..|+.++..+|.+.++||+|-|++||+|+|..+.++||+|+++.. ....+....||++|+++. | .+
T Consensus 68 pV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA----qhYtEaAlDEIklL~~v~~~Dp~~~~~~~ 143 (590)
T KOG1290|consen 68 PVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA----QHYTEAALDEIKLLQQVREGDPNDPGKKC 143 (590)
T ss_pred eeeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh----hHHHHHHHHHHHHHHHHHhcCCCCCCCce
Confidence 35567788889999999999999999999999999999999999864 455667788999999983 2 37
Q ss_pred cceEEEEEEe----CCeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHc-CcccCCCCCCcEEEe
Q 001847 734 VPALYASFQT----KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQ 808 (1005)
Q Consensus 734 Iv~l~~~~~~----~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~-gIvHrDLkP~NILi~ 808 (1005)
||++++.|.. +.++|+|+|+. |.+|..++.....+.++...++.|++|||.||.|||.. ||||.||||+|||+.
T Consensus 144 VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 144 VVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLC 222 (590)
T ss_pred eeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeee
Confidence 9999999974 56999999999 99999999987777899999999999999999999965 999999999999995
Q ss_pred c
Q 001847 809 G 809 (1005)
Q Consensus 809 ~ 809 (1005)
.
T Consensus 223 ~ 223 (590)
T KOG1290|consen 223 S 223 (590)
T ss_pred c
Confidence 3
No 372
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=8e-32 Score=293.33 Aligned_cols=236 Identities=19% Similarity=0.260 Sum_probs=189.2
Q ss_pred ccccccCcEEEEEEEEcCCC----------eEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001847 678 KPLGSGDTGSVHLVELCGSG----------QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 747 (1005)
Q Consensus 678 ~~LG~G~~g~Vy~a~~~~~~----------~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 747 (1005)
+.||+|+||.||++.+..++ ..+++|.+.... .....+.+|+.+++.++||||+++++++.. ...
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~ 75 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH----RDSLAFFETASLMSQLSHKHLVKLYGVCVR-DEN 75 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccch----hhHHHHHHHHHHHHcCCCcchhheeeEEec-CCc
Confidence 46899999999999997776 357888765432 115678889999999999999999999888 778
Q ss_pred EEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCC-------cEEEEeccC
Q 001847 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-------HVSLTDFDL 820 (1005)
Q Consensus 748 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g-------~vkL~DFG~ 820 (1005)
++||||+.+++|.+++..... .++...+..++.||+.||.|||++||+|+||||+|||++.++ .+||+|||+
T Consensus 76 ~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~ 154 (259)
T cd05037 76 IMVEEYVKFGPLDVFLHREKN-NVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGI 154 (259)
T ss_pred EEEEEcCCCCcHHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCc
Confidence 999999999999999976532 589999999999999999999999999999999999999887 799999998
Q ss_pred CcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC--CCCChhhHHHHHHHHHHHHc-C
Q 001847 821 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA--GHTSAVDWWALGILLYEMLY-G 897 (1005)
Q Consensus 821 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~--~~~~~sDIwSlGvll~eLlt-G 897 (1005)
+..... .....++..|+|||++... .++.++|||||||++|+|++ |
T Consensus 155 a~~~~~-------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~ 203 (259)
T cd05037 155 PITVLS-------------------------------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNG 203 (259)
T ss_pred cccccc-------------------------------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCC
Confidence 854321 1123466789999999776 78889999999999999998 6
Q ss_pred CCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHc
Q 001847 898 YTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 957 (1005)
Q Consensus 898 ~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 957 (1005)
..||...+......... .....+. .....+.+|+.+||..+|.+||+ +.++++
T Consensus 204 ~~p~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~li~~~l~~~p~~Rpt----~~~il~ 256 (259)
T cd05037 204 EEPLSTLSSSEKERFYQ-DQHRLPM--PDCAELANLINQCWTYDPTKRPS----FRAILR 256 (259)
T ss_pred CCCcccCCchhHHHHHh-cCCCCCC--CCchHHHHHHHHHhccChhhCCC----HHHHHH
Confidence 88887665433322222 2111111 22368899999999999999999 666654
No 373
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4e-34 Score=287.39 Aligned_cols=264 Identities=25% Similarity=0.376 Sum_probs=212.7
Q ss_pred ccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEe------
Q 001847 670 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT------ 743 (1005)
Q Consensus 670 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~------ 743 (1005)
..+.|..+..||+|.||.||+|+.+.+|+.||+|++.-. ...........+|+++|..|+|+|++.+++.+..
T Consensus 15 ~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlme-neKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~ 93 (376)
T KOG0669|consen 15 EVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLME-NEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTN 93 (376)
T ss_pred cchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHh-ccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcc
Confidence 457899999999999999999999999999999865432 1122233456789999999999999988877642
Q ss_pred --CCeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCC
Q 001847 744 --KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 821 (1005)
Q Consensus 744 --~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a 821 (1005)
...+|+||.+| ..+|..++... ...++...++.++++++.||.|+|.+.|+|||+||.|+||+.+|.+||.|||++
T Consensus 94 r~r~t~ylVf~~c-ehDLaGlLsn~-~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGla 171 (376)
T KOG0669|consen 94 RDRATFYLVFDFC-EHDLAGLLSNR-KVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLA 171 (376)
T ss_pred cccceeeeeHHHh-hhhHHHHhcCc-cccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccccc
Confidence 34589999999 66888888643 345999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCC
Q 001847 822 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTP 900 (1005)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlGvll~eLltG~~P 900 (1005)
+..+.......|. ....+.|.+|++||.+.+. .++++.|||+.||++.+|.++.+.
T Consensus 172 r~fs~~~n~~kpr-----------------------ytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspi 228 (376)
T KOG0669|consen 172 RAFSTSKNVVKPR-----------------------YTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPI 228 (376)
T ss_pred cceecccccCCCC-----------------------cccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCcc
Confidence 7655433222111 2345679999999999875 688999999999999999999999
Q ss_pred CCCCChHHHHHHHHh--CCC---CCCC----------------------------CCCCCHHHHHHHHHccccCcCccCC
Q 001847 901 FRGKTRQKTFANILH--KDL---KFPS----------------------------STPTSLHAKQLMYRLLHRDPKSRLG 947 (1005)
Q Consensus 901 f~~~~~~~~~~~i~~--~~~---~~~~----------------------------~~~~s~~l~~Ll~~~L~~dP~~Rpt 947 (1005)
|.+.+....+..|.. +.+ -||. ...-+.++.+|+.+||..||.+|++
T Consensus 229 mqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ 308 (376)
T KOG0669|consen 229 MQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRID 308 (376)
T ss_pred ccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcc
Confidence 999988877776643 211 1111 0112346779999999999999999
Q ss_pred ChhcHHHHHcCCCCCC
Q 001847 948 SHEGANEIKKHPFFKG 963 (1005)
Q Consensus 948 ~~~~a~elL~hpff~~ 963 (1005)
+.++|+|.||..
T Consensus 309 ----ad~alnh~~F~k 320 (376)
T KOG0669|consen 309 ----ADQALNHDFFWK 320 (376)
T ss_pred ----hHhhhchhhhhc
Confidence 999999999986
No 374
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=100.00 E-value=1.7e-33 Score=307.29 Aligned_cols=257 Identities=27% Similarity=0.407 Sum_probs=211.5
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCC------CCcceEEEEEE
Q 001847 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH------PFVPALYASFQ 742 (1005)
Q Consensus 669 i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~h------pnIv~l~~~~~ 742 (1005)
+...+|.+....|.|-||+|..|.+...|..||||++....+ -.+.-+.|++||++|.. -|+++++..|.
T Consensus 429 ~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~----M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~ 504 (752)
T KOG0670|consen 429 LLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV----MHKTGLKELEILKKLNDADPEDKFHCLRLFRHFK 504 (752)
T ss_pred hhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH----HhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhh
Confidence 346899999999999999999999999999999999986532 23344679999999953 48999999999
Q ss_pred eCCeEEEEEeccCCCchhhHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecC-CcEEEEeccC
Q 001847 743 TKTHVCLITDYCPGGELFLLLDRQ-PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDL 820 (1005)
Q Consensus 743 ~~~~~~lV~E~~~ggsL~~~l~~~-~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~-g~vkL~DFG~ 820 (1005)
..+++|||||-+ .-+|.+++++- ..-.|....++.|+.||+.||..|-.+||+|.||||+|||++.+ ..+||||||.
T Consensus 505 hknHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGS 583 (752)
T KOG0670|consen 505 HKNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGS 583 (752)
T ss_pred hcceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCcc
Confidence 999999999999 88999999853 22348889999999999999999999999999999999999965 6799999999
Q ss_pred CcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCC
Q 001847 821 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP 900 (1005)
Q Consensus 821 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~P 900 (1005)
|...+.. .-..+..+..|.|||++.+.+|++..|+||.||+||||+||+..
T Consensus 584 A~~~~en-----------------------------eitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIl 634 (752)
T KOG0670|consen 584 ASFASEN-----------------------------EITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKIL 634 (752)
T ss_pred ccccccc-----------------------------cccHHHHHHhccCcceeecCcccCCccceeeceeeEEeecccee
Confidence 8543321 12335667789999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHhCCCCCCC---------------------------------------------------CCCC---
Q 001847 901 FRGKTRQKTFANILHKDLKFPS---------------------------------------------------STPT--- 926 (1005)
Q Consensus 901 f~~~~~~~~~~~i~~~~~~~~~---------------------------------------------------~~~~--- 926 (1005)
|+|.++..++.-.+.-..++|. ...+
T Consensus 635 FpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~de 714 (752)
T KOG0670|consen 635 FPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDE 714 (752)
T ss_pred cCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCch
Confidence 9998877666544331111110 0001
Q ss_pred ----CHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCC
Q 001847 927 ----SLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 963 (1005)
Q Consensus 927 ----s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~ 963 (1005)
-..+.+||.+||..||++|.| +.++|+||||+.
T Consensus 715 q~~~~~~~rdLLdkml~LdP~KRit----~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 715 QPKIVQQLRDLLDKMLILDPEKRIT----VNQALKHPFITE 751 (752)
T ss_pred hHHHHHHHHHHHHHHhccChhhcCC----HHHHhcCCcccC
Confidence 125679999999999999999 999999999974
No 375
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-33 Score=289.56 Aligned_cols=253 Identities=26% Similarity=0.478 Sum_probs=212.2
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC------
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 744 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------ 744 (1005)
..+|.-++.+|.|+- .|..+.|.-+++++|+|.+... .......++.++|..++..+.|+||++++.+|...
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~p-f~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~ 93 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRP-FQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEF 93 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCc-cccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHH
Confidence 358999999999999 7889999999999999988776 33445567888999999999999999999999754
Q ss_pred CeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCccc
Q 001847 745 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 824 (1005)
Q Consensus 745 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~ 824 (1005)
..+|+||||| ..+|...+... ++...+..++.|++.|+.|||+.||+||||||+||++..++.+||.|||+|...
T Consensus 94 ~e~y~v~e~m-~~nl~~vi~~e----lDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e 168 (369)
T KOG0665|consen 94 QEVYLVMELM-DANLCQVILME----LDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTE 168 (369)
T ss_pred HhHHHHHHhh-hhHHHHHHHHh----cchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhccc
Confidence 3689999999 88898887632 778899999999999999999999999999999999999999999999999653
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001847 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 904 (1005)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~ 904 (1005)
..+ ...+.++.|..|.|||++.+..+...+||||+||++.+|++|+..|.|.
T Consensus 169 ~~~----------------------------~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~ 220 (369)
T KOG0665|consen 169 DTD----------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGK 220 (369)
T ss_pred Ccc----------------------------cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCc
Confidence 321 1234568899999999999999999999999999999999999999987
Q ss_pred ChHHHHHHHHhC------------------------------------CCCCCCC----CCCCHHHHHHHHHccccCcCc
Q 001847 905 TRQKTFANILHK------------------------------------DLKFPSS----TPTSLHAKQLMYRLLHRDPKS 944 (1005)
Q Consensus 905 ~~~~~~~~i~~~------------------------------------~~~~~~~----~~~s~~l~~Ll~~~L~~dP~~ 944 (1005)
+....+.++... +..|+.. ......+.+|+.+||..||++
T Consensus 221 d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~ 300 (369)
T KOG0665|consen 221 DHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEK 300 (369)
T ss_pred hHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhh
Confidence 776666555431 0011111 112346789999999999999
Q ss_pred cCCChhcHHHHHcCCCCC
Q 001847 945 RLGSHEGANEIKKHPFFK 962 (1005)
Q Consensus 945 Rpt~~~~a~elL~hpff~ 962 (1005)
|.+ ++++|+||||+
T Consensus 301 Ris----v~daL~HPY~~ 314 (369)
T KOG0665|consen 301 RIS----VDDALRHPYIK 314 (369)
T ss_pred ccc----HHHHhcCCeee
Confidence 999 99999999999
No 376
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-32 Score=316.17 Aligned_cols=260 Identities=28% Similarity=0.409 Sum_probs=222.2
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceEEEEEEe-----C
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQT-----K 744 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~-----~ 744 (1005)
.+.|++...||.|.+|.||+++++.+++..|+|+...... .-..+..|.+|++.+ .|||++.++++|.. +
T Consensus 18 ~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d----~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~ 93 (953)
T KOG0587|consen 18 ADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED----EEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNG 93 (953)
T ss_pred CCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc----ccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCC
Confidence 4679999999999999999999999999999999876532 224566788888888 79999999999863 5
Q ss_pred CeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCccc
Q 001847 745 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 824 (1005)
Q Consensus 745 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~ 824 (1005)
+.+|||||||.|||.-++++.-.+..+.+..+.-|++.++.||.+||.+.++|||||-.|||++.+|.|||+|||++...
T Consensus 94 DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQl 173 (953)
T KOG0587|consen 94 DQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 173 (953)
T ss_pred CeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeeee
Confidence 78999999999999999998766778999999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-----CCCChhhHHHHHHHHHHHHcCCC
Q 001847 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-----GHTSAVDWWALGILLYEMLYGYT 899 (1005)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-----~~~~~sDIwSlGvll~eLltG~~ 899 (1005)
. ......++.+|||+|||||++... .|+..+|+||||++..||.-|.+
T Consensus 174 d---------------------------sT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~P 226 (953)
T KOG0587|consen 174 D---------------------------STVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAP 226 (953)
T ss_pred e---------------------------cccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCC
Confidence 2 233455678999999999998543 45679999999999999999999
Q ss_pred CCCCCChHHHHHHHHhCCCCCC-CCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCC
Q 001847 900 PFRGKTRQKTFANILHKDLKFP-SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 965 (1005)
Q Consensus 900 Pf~~~~~~~~~~~i~~~~~~~~-~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~ 965 (1005)
|+....+...+..|-+...+.. .+..-+.++.+||..||.+|-++||+ ..++|+|||++.-.
T Consensus 227 Pl~DmHPmraLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~----~~~ll~hpFi~e~~ 289 (953)
T KOG0587|consen 227 PLCDMHPMRALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPS----TEELLKHPFITEQP 289 (953)
T ss_pred CccCcchhhhhccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcc----hhhhccCCcccccc
Confidence 9988888777666655543322 23344678899999999999999999 99999999999533
No 377
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1.9e-31 Score=297.09 Aligned_cols=259 Identities=16% Similarity=0.171 Sum_probs=189.3
Q ss_pred cccCCccccccccccCcEEEEEEEEcCC---CeEEEEEEeecccccChHH--------HHHHHHHHHHHHhCCCCCcceE
Q 001847 669 INLQHFRPIKPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGVMLNRNK--------VHRACAEREILDMLDHPFVPAL 737 (1005)
Q Consensus 669 i~~~~y~~~~~LG~G~~g~Vy~a~~~~~---~~~valK~~~~~~~~~~~~--------~~~~~~E~~il~~l~hpnIv~l 737 (1005)
+...+|++.+.||+|+||.||+|.+..+ +..+++|+........... ......+...+..+.|++|+.+
T Consensus 9 i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~ 88 (294)
T PHA02882 9 ITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKY 88 (294)
T ss_pred cCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcE
Confidence 4457899999999999999999999777 6677888643221100000 0111223344556789999999
Q ss_pred EEEEEeCC----eEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcE
Q 001847 738 YASFQTKT----HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHV 813 (1005)
Q Consensus 738 ~~~~~~~~----~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~v 813 (1005)
++++.... ..+++++++ ..++.+++... ...++..+..++.||+.||.|||+++|+||||||+|||++.++.+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~ 165 (294)
T PHA02882 89 YGCGSFKRCRMYYRFILLEKL-VENTKEIFKRI--KCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRG 165 (294)
T ss_pred EEeeeEecCCceEEEEEEehh-ccCHHHHHHhh--ccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcE
Confidence 98765443 457888888 55777776553 236788899999999999999999999999999999999999999
Q ss_pred EEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHH
Q 001847 814 SLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYE 893 (1005)
Q Consensus 814 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~e 893 (1005)
+|+|||+|.......... ...........||+.|+|||++.+..++.++|||||||++|+
T Consensus 166 ~l~DFGla~~~~~~~~~~--------------------~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~e 225 (294)
T PHA02882 166 YIIDYGIASHFIIHGKHI--------------------EYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLK 225 (294)
T ss_pred EEEEcCCceeeccCCccc--------------------ccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHH
Confidence 999999986543211100 000111233469999999999999999999999999999999
Q ss_pred HHcCCCCCCCCCh-HHH--------HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHc
Q 001847 894 MLYGYTPFRGKTR-QKT--------FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 957 (1005)
Q Consensus 894 LltG~~Pf~~~~~-~~~--------~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 957 (1005)
|++|..||.+... ... +..+....... ...+..+.+++..|+..+|++||+ +.++++
T Consensus 226 l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~rp~----~~~l~~ 291 (294)
T PHA02882 226 WAGIKLPWKGFGHNGNLIHAAKCDFIKRLHEGKIKI---KNANKFIYDFIECVTKLSYEEKPD----YDALIK 291 (294)
T ss_pred HHhCCCCCCccccchHHHHHhHHHHHHHhhhhhhcc---CCCCHHHHHHHHHHHhCCCCCCCC----HHHHHH
Confidence 9999999987632 221 12222222222 234678999999999999999999 666553
No 378
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-33 Score=286.80 Aligned_cols=264 Identities=24% Similarity=0.362 Sum_probs=214.3
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHH-HHhCCCCCcceEEEEEEeCCeE
Q 001847 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREI-LDMLDHPFVPALYASFQTKTHV 747 (1005)
Q Consensus 669 i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~i-l~~l~hpnIv~l~~~~~~~~~~ 747 (1005)
+..+..+-+..||.|+||+|++..++.+|+..|||.++.... .....++..|.+. ++.-++||||++|+....++.-
T Consensus 61 F~~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~--~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdc 138 (361)
T KOG1006|consen 61 FTSDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI--EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDC 138 (361)
T ss_pred cccchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc--hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCce
Confidence 344567778899999999999999999999999999987532 3344566667665 4555899999999999888889
Q ss_pred EEEEeccCCCchhhHHhh---CCCCCCCHHHHHHHHHHHHHHHHHHHHc-CcccCCCCCCcEEEecCCcEEEEeccCCcc
Q 001847 748 CLITDYCPGGELFLLLDR---QPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCL 823 (1005)
Q Consensus 748 ~lV~E~~~ggsL~~~l~~---~~~~~l~~~~i~~i~~qil~aL~~LH~~-gIvHrDLkP~NILi~~~g~vkL~DFG~a~~ 823 (1005)
||.||+| ..+|..+.+. .....+++.-+-.|..-.+.||.||-.. +||||||||+|||++..|.+||||||.+-.
T Consensus 139 WiCMELM-d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGq 217 (361)
T KOG1006|consen 139 WICMELM-DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQ 217 (361)
T ss_pred eeeHHHH-hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHh
Confidence 9999999 7777655442 1234589999999999999999999965 899999999999999999999999998743
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC--CCCCChhhHHHHHHHHHHHHcCCCCC
Q 001847 824 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYTPF 901 (1005)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~~sDIwSlGvll~eLltG~~Pf 901 (1005)
... +.....-+|-..|||||.+.. ..++.+||+||||++|||++||.+||
T Consensus 218 Lv~----------------------------SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPy 269 (361)
T KOG1006|consen 218 LVD----------------------------SIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPY 269 (361)
T ss_pred HHH----------------------------HHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCc
Confidence 321 112233468899999999854 35788999999999999999999999
Q ss_pred CCC-ChHHHHHHHHhCCCCCCCC----CCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCChh
Q 001847 902 RGK-TRQKTFANILHKDLKFPSS----TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 967 (1005)
Q Consensus 902 ~~~-~~~~~~~~i~~~~~~~~~~----~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~~~ 967 (1005)
.+- +..+++..++.+.++.... ...+..+.+||.-||.+|-..||. ..+|+++||++-...+
T Consensus 270 r~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpk----y~~Lk~~~fyr~y~~~ 336 (361)
T KOG1006|consen 270 RKWDSVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPK----YDDLKKFPFYRMYAVE 336 (361)
T ss_pred chHHHHHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhcccccCcc----hhhhhcCchhhhhhhc
Confidence 874 4467788888887665433 236888999999999999999999 9999999999975433
No 379
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.98 E-value=3.4e-31 Score=290.78 Aligned_cols=248 Identities=18% Similarity=0.301 Sum_probs=191.6
Q ss_pred ccccccCcEEEEEEEEcCC--CeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccC
Q 001847 678 KPLGSGDTGSVHLVELCGS--GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCP 755 (1005)
Q Consensus 678 ~~LG~G~~g~Vy~a~~~~~--~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ 755 (1005)
+.||+|+||.||++..... ...+++|.+.... .......+.+|+.+++.++||||+++++.+......|+||||+.
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 78 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANA--SSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCE 78 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCC--ChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCC
Confidence 3589999999999976333 3456777765432 23345678889999999999999999999999999999999999
Q ss_pred CCchhhHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCC
Q 001847 756 GGELFLLLDRQP--TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 833 (1005)
Q Consensus 756 ggsL~~~l~~~~--~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~ 833 (1005)
+++|.+++.... ...++...++.++.||+.||.|||+++++|+||||+|||++.++.++|+|||++........
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~---- 154 (268)
T cd05086 79 LGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDY---- 154 (268)
T ss_pred CCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchh----
Confidence 999999987532 23467778889999999999999999999999999999999999999999998743211100
Q ss_pred cchhhhhcccCCCCCcccccccccccccccCCcccccccccC-------CCCCChhhHHHHHHHHHHHHc-CCCCCCCCC
Q 001847 834 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-------AGHTSAVDWWALGILLYEMLY-GYTPFRGKT 905 (1005)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-------~~~~~~sDIwSlGvll~eLlt-G~~Pf~~~~ 905 (1005)
........++..|+|||++.. ..++.++|||||||++|+|++ |..||....
T Consensus 155 ---------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~ 213 (268)
T cd05086 155 ---------------------IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLS 213 (268)
T ss_pred ---------------------hhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC
Confidence 011123567889999999743 234678999999999999996 677898777
Q ss_pred hHHHHHHHHhCC-CCCC---CCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHc
Q 001847 906 RQKTFANILHKD-LKFP---SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 957 (1005)
Q Consensus 906 ~~~~~~~i~~~~-~~~~---~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 957 (1005)
..+.+..+..+. ...+ .....+..+.+++..|| .+|++||+ +.++++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~----~~~i~~ 264 (268)
T cd05086 214 DREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRAT----AEEVHR 264 (268)
T ss_pred HHHHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCCC----HHHHHH
Confidence 776666655442 2211 12346778899999999 68999999 666543
No 380
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.98 E-value=3.7e-32 Score=305.49 Aligned_cols=258 Identities=21% Similarity=0.292 Sum_probs=219.0
Q ss_pred cCCccccccccccCcEEEEEEEEcCC-C--eEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGS-G--QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 747 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~-~--~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 747 (1005)
....++.+.||+|+||+|+++.+... | ..||||+++...... ...+|.+|+.+|.+|+|+|++++|++..+ ..+
T Consensus 109 ee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~--~mddflrEas~M~~L~H~hliRLyGvVl~-qp~ 185 (1039)
T KOG0199|consen 109 EEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA--IMDDFLREASHMLKLQHPHLIRLYGVVLD-QPA 185 (1039)
T ss_pred HHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch--hHHHHHHHHHHHHhccCcceeEEeeeecc-chh
Confidence 34667888999999999999998543 3 368999998764432 67899999999999999999999999887 667
Q ss_pred EEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001847 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (1005)
Q Consensus 748 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 827 (1005)
.+|||+++.|+|.+.|.+.....|....+..|+.||+.||.||..+++|||||-..|||+..-..|||+|||+.+..+..
T Consensus 186 mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~n 265 (1039)
T KOG0199|consen 186 MMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGEN 265 (1039)
T ss_pred hHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCC
Confidence 89999999999999999866778999999999999999999999999999999999999999999999999999776543
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCh
Q 001847 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 906 (1005)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~Pf~~~~~ 906 (1005)
...+ .......-...|+|||.|....++.++|+|+|||+||||++ |+.||.|...
T Consensus 266 ed~Y------------------------vm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g 321 (1039)
T KOG0199|consen 266 EDMY------------------------VMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRG 321 (1039)
T ss_pred Ccce------------------------EecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCH
Confidence 3221 11122234567999999999999999999999999999996 9999999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHH
Q 001847 907 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 956 (1005)
Q Consensus 907 ~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL 956 (1005)
..++++|- ..-.++....++..+.+++..||..+|++||+|..+.++.+
T Consensus 322 ~qIL~~iD-~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~~ 370 (1039)
T KOG0199|consen 322 IQILKNID-AGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLV 370 (1039)
T ss_pred HHHHHhcc-ccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHH
Confidence 99888887 44456666678999999999999999999999655443433
No 381
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-31 Score=297.09 Aligned_cols=263 Identities=22% Similarity=0.305 Sum_probs=222.6
Q ss_pred ccccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 001847 666 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 745 (1005)
Q Consensus 666 ~~~i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 745 (1005)
.|.+...+.....+||.|.||.||.+.+++....+|||.++.+. -..+.|+.|+.+|+.++|||+|+++++|..+.
T Consensus 261 kWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt----MeveEFLkEAAvMKeikHpNLVqLLGVCT~Ep 336 (1157)
T KOG4278|consen 261 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEP 336 (1157)
T ss_pred hhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcc----hhHHHHHHHHHHHHhhcCccHHHHhhhhccCC
Confidence 45566677778899999999999999999999999999988653 35688999999999999999999999999999
Q ss_pred eEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 001847 746 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 825 (1005)
Q Consensus 746 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~ 825 (1005)
.+|||+|||..|+|.+|++......++.-.+..++.||..|+.||..+++|||||-..|+|+..+..||+.|||+++.+.
T Consensus 337 PFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMt 416 (1157)
T KOG4278|consen 337 PFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMT 416 (1157)
T ss_pred CeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhhc
Confidence 99999999999999999997666667777888899999999999999999999999999999999999999999998875
Q ss_pred CCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCC
Q 001847 826 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGK 904 (1005)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~Pf~~~ 904 (1005)
.+.- ..+...--...|.|||.|....++.++|||+|||+|||+.| |-.||.|.
T Consensus 417 gDTY--------------------------TAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGi 470 (1157)
T KOG4278|consen 417 GDTY--------------------------TAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGI 470 (1157)
T ss_pred CCce--------------------------ecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCc
Confidence 3311 11111223457999999999999999999999999999996 99999998
Q ss_pred ChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCC
Q 001847 905 TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 960 (1005)
Q Consensus 905 ~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpf 960 (1005)
+....+. ++...+.......+++....|+..||.++|..||+|++ +.+.++.-|
T Consensus 471 dlSqVY~-LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFae-iHqafEtmf 524 (1157)
T KOG4278|consen 471 DLSQVYG-LLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAE-IHQAFETMF 524 (1157)
T ss_pred cHHHHHH-HHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHH-HHHHHHHHh
Confidence 8777664 45555555566678999999999999999999999876 344444333
No 382
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.97 E-value=2.3e-31 Score=294.48 Aligned_cols=254 Identities=22% Similarity=0.325 Sum_probs=208.4
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 001847 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 748 (1005)
Q Consensus 669 i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 748 (1005)
+..+...++++||+|.||.|.+|.- ..+..||+|.++... .......+..|+++|.+|+||||+.++++|..++.+|
T Consensus 535 fPRs~L~~~ekiGeGqFGEVhLCev-eg~lkVAVK~Lr~~a--~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePic 611 (807)
T KOG1094|consen 535 FPRSRLRFKEKIGEGQFGEVHLCEV-EGPLKVAVKILRPDA--TKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLC 611 (807)
T ss_pred cchhheehhhhhcCcccceeEEEEe-cCceEEEEeecCccc--chhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchH
Confidence 3446778899999999999999987 346899999998764 3455688999999999999999999999999999999
Q ss_pred EEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 001847 749 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 828 (1005)
Q Consensus 749 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~ 828 (1005)
+|+|||++|+|.+++..+....+.......|+.||+.||+||.+.++|||||.+.|+|++.++++||+|||+++......
T Consensus 612 mI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~ 691 (807)
T KOG1094|consen 612 MITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGD 691 (807)
T ss_pred HHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccCC
Confidence 99999999999999987643334556677799999999999999999999999999999999999999999996543111
Q ss_pred CCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHH--cCCCCCCCCCh
Q 001847 829 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML--YGYTPFRGKTR 906 (1005)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLl--tG~~Pf~~~~~ 906 (1005)
. .+.....+-...|||||.+..++++.++|+|+||+++||++ +..-||...+.
T Consensus 692 y-------------------------y~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~ 746 (807)
T KOG1094|consen 692 Y-------------------------YRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTD 746 (807)
T ss_pred c-------------------------eeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhH
Confidence 0 01122334567899999999999999999999999999987 57889988877
Q ss_pred HHHHHHHHhC-----C-CCCCCCCCCCHHHHHHHHHccccCcCccCCChh
Q 001847 907 QKTFANILHK-----D-LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 950 (1005)
Q Consensus 907 ~~~~~~i~~~-----~-~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~ 950 (1005)
.....+.-.- . .-++.+.-++..+.+++..||..+..+||++.+
T Consensus 747 e~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~ 796 (807)
T KOG1094|consen 747 EQVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQ 796 (807)
T ss_pred HHHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHH
Confidence 7666554321 1 112233457788999999999999999999443
No 383
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=5e-33 Score=281.99 Aligned_cols=281 Identities=27% Similarity=0.442 Sum_probs=220.0
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC-----eE
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT-----HV 747 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~-----~~ 747 (1005)
+.+..+.||.|+||+||.+.|..+|+.|++|.+..- ...-...+++++|+++|...+|.||+..++.....+ .+
T Consensus 54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnv-fq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEi 132 (449)
T KOG0664|consen 54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNV-FQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQEL 132 (449)
T ss_pred cCCCCCcccccceeEEEeccCCCCccchhHhhcchH-HHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHH
Confidence 456678899999999999999999999999988643 445567789999999999999999999988876543 46
Q ss_pred EEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001847 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (1005)
Q Consensus 748 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 827 (1005)
|+++|+| ..+|...+-. ...++.+.++-++.||++||+|||+.||.||||||.|+|+++|..+||||||+++.-..+
T Consensus 133 YV~TELm-QSDLHKIIVS--PQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d 209 (449)
T KOG0664|consen 133 YVLTELM-QSDLHKIIVS--PQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQR 209 (449)
T ss_pred HHHHHHH-Hhhhhheecc--CCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchh
Confidence 8899999 7788777643 356999999999999999999999999999999999999999999999999999654322
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001847 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTR 906 (1005)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlGvll~eLltG~~Pf~~~~~ 906 (1005)
.. ......+.|-+|+|||++.+. .|+.+.||||.||++.||+..+..|...++
T Consensus 210 ~~--------------------------~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~P 263 (449)
T KOG0664|consen 210 DR--------------------------LNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGP 263 (449)
T ss_pred hh--------------------------hhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccCh
Confidence 11 112234678899999999885 578899999999999999999999988777
Q ss_pred HHHHHHHHh-----------------------CCCCCCCCC---------CCCHHHHHHHHHccccCcCccCCChhcHHH
Q 001847 907 QKTFANILH-----------------------KDLKFPSST---------PTSLHAKQLMYRLLHRDPKSRLGSHEGANE 954 (1005)
Q Consensus 907 ~~~~~~i~~-----------------------~~~~~~~~~---------~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~e 954 (1005)
.+.+..|.. +....|+.. .-..+...++.+||..||++|++ ..+
T Consensus 264 iqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris----~~~ 339 (449)
T KOG0664|consen 264 IEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRIS----VEE 339 (449)
T ss_pred HHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCccccc----Hhh
Confidence 666554422 222222211 12236678999999999999999 999
Q ss_pred HHcCCCCCCCChhhh-----hhcCCCCCCCCCCCCccc
Q 001847 955 IKKHPFFKGVNWALV-----RCMNPPELDAPLFATDTE 987 (1005)
Q Consensus 955 lL~hpff~~~~~~~~-----~~~~~~~~~~p~~~~~~~ 987 (1005)
++.|+|+...-+.-+ .|+..+-.+...|..+++
T Consensus 340 A~~~~~~~e~R~r~~sCmC~~~~tt~~~~~r~f~~~~~ 377 (449)
T KOG0664|consen 340 ALQHRYLEEGRLRFHSCMCSCCYTKPNMPSRLFAQDLD 377 (449)
T ss_pred hcccccccccceeeeeeeEeeeccCCCcchhhhccccC
Confidence 999999988655533 444444443334444443
No 384
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97 E-value=4e-31 Score=316.95 Aligned_cols=263 Identities=17% Similarity=0.215 Sum_probs=180.8
Q ss_pred ccCCccccccccccCcEEEEEEEEcCC----CeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEE-----
Q 001847 670 NLQHFRPIKPLGSGDTGSVHLVELCGS----GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYAS----- 740 (1005)
Q Consensus 670 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~----~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~----- 740 (1005)
..++|.+.+.||+|+||.||+|.+..+ +..||+|.+..... ......+ .++...+.++..+...
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~-----~e~~~~e--~l~~~~~~~~~~~~~~~~~~~ 202 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA-----VEIWMNE--RVRRACPNSCADFVYGFLEPV 202 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch-----hHHHHHH--HHHhhchhhHHHHHHhhhccc
Confidence 457999999999999999999999888 89999998764211 1111111 1122222222222111
Q ss_pred -EEeCCeEEEEEeccCCCchhhHHhhCCCC------------------CCCHHHHHHHHHHHHHHHHHHHHcCcccCCCC
Q 001847 741 -FQTKTHVCLITDYCPGGELFLLLDRQPTK------------------VLKEDAVRFYAAEVVVALEYLHCQGIIYRDLK 801 (1005)
Q Consensus 741 -~~~~~~~~lV~E~~~ggsL~~~l~~~~~~------------------~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLk 801 (1005)
.......++||||+.+++|.+++...... ......+..++.||+.||.|||++||+|||||
T Consensus 203 ~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLK 282 (566)
T PLN03225 203 SSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVK 282 (566)
T ss_pred ccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCC
Confidence 23556799999999999999998653210 11234567899999999999999999999999
Q ss_pred CCcEEEec-CCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCC---
Q 001847 802 PENVLLQG-NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG--- 877 (1005)
Q Consensus 802 P~NILi~~-~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~--- 877 (1005)
|+|||++. ++.+||+|||+|....... .......++++.|+|||.+....
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~--------------------------~~~~~~~~~t~~Y~APE~~~~~~~~~ 336 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGI--------------------------NYIPKEFLLDPRYAAPEQYIMSTQTP 336 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCcccccccc--------------------------ccCCcccccCCCccChHHhhccCCCC
Confidence 99999995 5899999999996432110 01123457899999999764322
Q ss_pred -------------------CCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHh-CCCCC-----------------
Q 001847 878 -------------------HTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILH-KDLKF----------------- 920 (1005)
Q Consensus 878 -------------------~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~~i~~-~~~~~----------------- 920 (1005)
++.++|||||||+||+|+++..++.. ....+..++. ....+
T Consensus 337 ~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 414 (566)
T PLN03225 337 SAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDS--NLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRR 414 (566)
T ss_pred CCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCch--HHHHHHHHHHhcCCcHHHHHHhhccccchhhhh
Confidence 23356999999999999997766532 2222222111 11000
Q ss_pred --CCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCChhhhhh
Q 001847 921 --PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRC 971 (1005)
Q Consensus 921 --~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~~~~~~~ 971 (1005)
......+..+++||.+||++||.+||| +.++|+||||++..+..+..
T Consensus 415 ~~~~~d~~~~~~~dLi~~mL~~dP~kR~t----a~e~L~Hpff~~~~~~~~~~ 463 (566)
T PLN03225 415 GFEVLDLDGGAGWELLKSMMRFKGRQRIS----AKAALAHPYFDREGLLGLSV 463 (566)
T ss_pred hhhhccccchHHHHHHHHHccCCcccCCC----HHHHhCCcCcCCCCcccccc
Confidence 000112334568999999999999999 99999999999987765533
No 385
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-31 Score=305.89 Aligned_cols=245 Identities=31% Similarity=0.449 Sum_probs=194.5
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC------C
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------T 745 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------~ 745 (1005)
..+..-+.||.|+||.||+++++.+|+.+|||.+.... .....+...+|+++|++++|+|||+++++-... .
T Consensus 13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~--~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~ 90 (732)
T KOG4250|consen 13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES--SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTR 90 (732)
T ss_pred cceeehhhhcCCccceeeeecccccccchhHHhhhhhc--ccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccc
Confidence 34566688999999999999999999999999998754 345567888999999999999999999876543 3
Q ss_pred eEEEEEeccCCCchhhHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEec--CC--cEEEEeccC
Q 001847 746 HVCLITDYCPGGELFLLLDRQ-PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG--NG--HVSLTDFDL 820 (1005)
Q Consensus 746 ~~~lV~E~~~ggsL~~~l~~~-~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~--~g--~vkL~DFG~ 820 (1005)
...+|||||.||+|..++..- ....|++..++.++..+..||.|||++|||||||||.||++-. +| .-||+|||.
T Consensus 91 ~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~ 170 (732)
T KOG4250|consen 91 LPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGA 170 (732)
T ss_pred cceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccc
Confidence 578999999999999999742 1234999999999999999999999999999999999999853 34 379999999
Q ss_pred CcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCC
Q 001847 821 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYT 899 (1005)
Q Consensus 821 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlGvll~eLltG~~ 899 (1005)
|+..+++. ...+++||+.|++||.+.. ..++..+|.|||||++|+++||..
T Consensus 171 Arel~d~s----------------------------~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~l 222 (732)
T KOG4250|consen 171 ARELDDNS----------------------------LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGEL 222 (732)
T ss_pred cccCCCCC----------------------------eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCC
Confidence 97654322 3457899999999999985 778889999999999999999999
Q ss_pred CCCCCCh----HHHHHHHHhC---------------CCC----CCCCCCCCH----HHHHHHHHccccCcCccC
Q 001847 900 PFRGKTR----QKTFANILHK---------------DLK----FPSSTPTSL----HAKQLMYRLLHRDPKSRL 946 (1005)
Q Consensus 900 Pf~~~~~----~~~~~~i~~~---------------~~~----~~~~~~~s~----~l~~Ll~~~L~~dP~~Rp 946 (1005)
||..... .+....+..+ .+. +|.+..++. .+...+..+|.++|.+|-
T Consensus 223 PF~p~~~pk~~~~~~~~~~tkkp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~ 296 (732)
T KOG4250|consen 223 PFIPFGGPKNNKEIMWHIITKKPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRG 296 (732)
T ss_pred CCCcCCCccccchhhhhhhccCCCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhC
Confidence 9954222 2333333321 111 122222222 345688999999999998
No 386
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.97 E-value=3.7e-31 Score=293.96 Aligned_cols=248 Identities=22% Similarity=0.346 Sum_probs=209.5
Q ss_pred CCccccccccccCcEEEEEEEEcCC----CeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGS----GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 747 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~----~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 747 (1005)
....+.+.||.|.||.||++....- .--||||.-+.+. ++...+.|..|..+|+.++||||+++++++.+. .+
T Consensus 389 e~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~--t~d~tekflqEa~iMrnfdHphIikLIGv~~e~-P~ 465 (974)
T KOG4257|consen 389 ELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDC--TPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PM 465 (974)
T ss_pred hhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCC--ChhhHHHHHHHHHHHHhCCCcchhheeeeeecc-ce
Confidence 3445567899999999999987322 3358899887654 455688999999999999999999999998874 58
Q ss_pred EEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001847 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (1005)
Q Consensus 748 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 827 (1005)
|||||+++-|.|..|++.+. ..++...+..++.||+.||+|||+.++|||||-..|||+.+..-|||+|||+++.+.++
T Consensus 466 WivmEL~~~GELr~yLq~nk-~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~ 544 (974)
T KOG4257|consen 466 WIVMELAPLGELREYLQQNK-DSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDD 544 (974)
T ss_pred eEEEecccchhHHHHHHhcc-ccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhcccc
Confidence 99999999999999998764 46999999999999999999999999999999999999999999999999999887644
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCh
Q 001847 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 906 (1005)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~Pf~~~~~ 906 (1005)
.-. ..+...-...|||||.+.-..++.++|||-||+.+||+++ |.-||.+-.+
T Consensus 545 ~yY--------------------------kaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkN 598 (974)
T KOG4257|consen 545 AYY--------------------------KASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKN 598 (974)
T ss_pred chh--------------------------hccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccc
Confidence 221 1112234567999999999999999999999999999985 9999999888
Q ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChh
Q 001847 907 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 950 (1005)
Q Consensus 907 ~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~ 950 (1005)
.+.+..+-++. .+|.++.+++.+..|+.+||.++|.+||++.+
T Consensus 599 sDVI~~iEnGe-RlP~P~nCPp~LYslmskcWayeP~kRPrfte 641 (974)
T KOG4257|consen 599 SDVIGHIENGE-RLPCPPNCPPALYSLMSKCWAYEPSKRPRFTE 641 (974)
T ss_pred cceEEEecCCC-CCCCCCCCChHHHHHHHHHhccCcccCCcHHH
Confidence 77776665553 45666678999999999999999999999865
No 387
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.97 E-value=3.4e-30 Score=276.19 Aligned_cols=242 Identities=43% Similarity=0.719 Sum_probs=203.0
Q ss_pred CcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCCchhhHH
Q 001847 684 DTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGELFLLL 763 (1005)
Q Consensus 684 ~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ggsL~~~l 763 (1005)
+||.||++.+..+++.+++|++........ ...+.+|+.++++++|+||+++++++......+++|||+.+++|..++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~ 78 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK--RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLL 78 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH--HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHH
Confidence 589999999988899999999876532221 578889999999999999999999999999999999999988999998
Q ss_pred hhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhccc
Q 001847 764 DRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHK 843 (1005)
Q Consensus 764 ~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~ 843 (1005)
..... ++...+..++.+++.++.|||+.|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 79 ~~~~~--~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--------------- 141 (244)
T smart00220 79 KKRGR--LSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG--------------- 141 (244)
T ss_pred HhccC--CCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeecccc---------------
Confidence 76432 8899999999999999999999999999999999999999999999999985543110
Q ss_pred CCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCC-CChHHHHHHHHhCCCCCCC
Q 001847 844 GQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG-KTRQKTFANILHKDLKFPS 922 (1005)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~-~~~~~~~~~i~~~~~~~~~ 922 (1005)
......++..|++||.+....++.++||||||+++|+|++|..||.. .........+.........
T Consensus 142 -------------~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 208 (244)
T smart00220 142 -------------LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPP 208 (244)
T ss_pred -------------ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCcc
Confidence 12234678899999999888888999999999999999999999987 4444444444333333322
Q ss_pred CCC-CCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCC
Q 001847 923 STP-TSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 961 (1005)
Q Consensus 923 ~~~-~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff 961 (1005)
... ++..+.+++.+||..+|++||+ +.++++||||
T Consensus 209 ~~~~~~~~~~~~i~~~l~~~p~~Rp~----~~~~~~~~~~ 244 (244)
T smart00220 209 PEWKISPEAKDLIRKLLVKDPEKRLT----AEEALQHPFF 244 (244)
T ss_pred ccccCCHHHHHHHHHHccCCchhccC----HHHHhhCCCC
Confidence 222 6788999999999999999999 9999999997
No 388
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.97 E-value=4.5e-30 Score=300.36 Aligned_cols=266 Identities=18% Similarity=0.200 Sum_probs=190.2
Q ss_pred ccccCCccccccccccCcEEEEEEEEc----------------CCCeEEEEEEeecccccChH-----------HHHHHH
Q 001847 668 QINLQHFRPIKPLGSGDTGSVHLVELC----------------GSGQYFAMKAMDKGVMLNRN-----------KVHRAC 720 (1005)
Q Consensus 668 ~i~~~~y~~~~~LG~G~~g~Vy~a~~~----------------~~~~~valK~~~~~~~~~~~-----------~~~~~~ 720 (1005)
.+..++|++.++||+|+||.||++.+. ..++.||||.+......... ..+...
T Consensus 141 r~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~ 220 (507)
T PLN03224 141 RWSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGM 220 (507)
T ss_pred CccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhH
Confidence 345779999999999999999999752 23567999998643211000 011223
Q ss_pred HHHHHHHhCCCCC-----cceEEEEEEe--------CCeEEEEEeccCCCchhhHHhhCCC-------------------
Q 001847 721 AEREILDMLDHPF-----VPALYASFQT--------KTHVCLITDYCPGGELFLLLDRQPT------------------- 768 (1005)
Q Consensus 721 ~E~~il~~l~hpn-----Iv~l~~~~~~--------~~~~~lV~E~~~ggsL~~~l~~~~~------------------- 768 (1005)
.|+.++.++.|.+ ++.++++|.. .+..++||||+.+++|.+++.....
T Consensus 221 vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~ 300 (507)
T PLN03224 221 VEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDN 300 (507)
T ss_pred HHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhh
Confidence 4666777776554 3666666643 3568999999999999998864211
Q ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCC
Q 001847 769 ---KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQ 845 (1005)
Q Consensus 769 ---~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~ 845 (1005)
..++...++.++.||+.+|.|||+.+|+||||||+|||++.++.+||+|||++........
T Consensus 301 ~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~---------------- 364 (507)
T PLN03224 301 MPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGIN---------------- 364 (507)
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCc----------------
Confidence 1245677889999999999999999999999999999999999999999999854321100
Q ss_pred CCCcccccccccccccccCCcccccccccCCCC----------------------CChhhHHHHHHHHHHHHcCCC-CCC
Q 001847 846 QNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH----------------------TSAVDWWALGILLYEMLYGYT-PFR 902 (1005)
Q Consensus 846 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~----------------------~~~sDIwSlGvll~eLltG~~-Pf~ 902 (1005)
.......+++.|+|||.+..... ..+.||||+||++|+|++|.. ||.
T Consensus 365 ----------~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~ 434 (507)
T PLN03224 365 ----------FNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVA 434 (507)
T ss_pred ----------cCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCcc
Confidence 00111235889999999854321 124699999999999999886 665
Q ss_pred CCChH-----------HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCc---CccCCChhcHHHHHcCCCCCC
Q 001847 903 GKTRQ-----------KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDP---KSRLGSHEGANEIKKHPFFKG 963 (1005)
Q Consensus 903 ~~~~~-----------~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP---~~Rpt~~~~a~elL~hpff~~ 963 (1005)
+.... .....+......++.....+..+++|+.+||..+| .+|+| +.++|+||||..
T Consensus 435 ~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlS----a~eaL~Hp~f~~ 505 (507)
T PLN03224 435 NIRLFNTELRQYDNDLNRWRMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLS----VGQALSHRFFLP 505 (507)
T ss_pred chhhhhhHHhhccchHHHHHhhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCC----HHHHhCCCCcCC
Confidence 32111 11112222344555555678899999999999876 68999 999999999963
No 389
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.97 E-value=1.7e-31 Score=304.56 Aligned_cols=266 Identities=24% Similarity=0.340 Sum_probs=226.6
Q ss_pred ccccccCCccccccccccCcEEEEEEEEcCCCe---EEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEE
Q 001847 666 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQ---YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 742 (1005)
Q Consensus 666 ~~~i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~---~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~ 742 (1005)
-..|+.....+.++||.|.||.||++..+..|+ .||||.++... ......+|+.|+.||-+.+||||+++.++..
T Consensus 623 akEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gy--tekqrrdFL~EAsIMGQFdHPNIIrLEGVVT 700 (996)
T KOG0196|consen 623 AKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGY--TEKQRRDFLSEASIMGQFDHPNIIRLEGVVT 700 (996)
T ss_pred hhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCc--cHHHHhhhhhhhhhcccCCCCcEEEEEEEEe
Confidence 345666778889999999999999999977764 68999998764 3445678999999999999999999999999
Q ss_pred eCCeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCc
Q 001847 743 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 822 (1005)
Q Consensus 743 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~ 822 (1005)
....+.||+|||++|+|..+|+.+.+ .++.-++..+++.|+.|++||-++|.|||||-..|||++++-.+|++|||+++
T Consensus 701 ks~PvMIiTEyMENGsLDsFLR~~DG-qftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSR 779 (996)
T KOG0196|consen 701 KSKPVMIITEYMENGSLDSFLRQNDG-QFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSR 779 (996)
T ss_pred cCceeEEEhhhhhCCcHHHHHhhcCC-ceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEecccccee
Confidence 99999999999999999999988754 48889999999999999999999999999999999999999999999999998
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHH-cCCCCC
Q 001847 823 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPF 901 (1005)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLl-tG~~Pf 901 (1005)
...+++...+.+. .-.-...|.|||.+...+++.+|||||+|+++||.+ +|..||
T Consensus 780 vledd~~~~ytt~------------------------GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPY 835 (996)
T KOG0196|consen 780 VLEDDPEAAYTTL------------------------GGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY 835 (996)
T ss_pred ecccCCCcccccc------------------------CCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcc
Confidence 7765542221111 011245799999999999999999999999999987 599999
Q ss_pred CCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhc---HHHHHcCC
Q 001847 902 RGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG---ANEIKKHP 959 (1005)
Q Consensus 902 ~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~---a~elL~hp 959 (1005)
...++++.+..|.++ ..+|.+..++..+.+|+..||++|-.+||.|.++ +..+++.|
T Consensus 836 WdmSNQdVIkaIe~g-yRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP 895 (996)
T KOG0196|consen 836 WDMSNQDVIKAIEQG-YRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNP 895 (996)
T ss_pred cccchHHHHHHHHhc-cCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCc
Confidence 999999988877665 5667777789999999999999999999997654 33445554
No 390
>PRK13560 hypothetical protein; Provisional
Probab=99.97 E-value=3.7e-30 Score=326.50 Aligned_cols=412 Identities=12% Similarity=0.088 Sum_probs=303.9
Q ss_pred ccccccccccccccccccchHHHHHHHHHhcCCeEEEEeCCCCCCcEEEccHHHHHHcCCChhhhcCCCCCcCCCCCCCh
Q 001847 171 VRSSGEMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDP 250 (1005)
Q Consensus 171 ~~~~~dit~~~~~e~~L~~~~~~l~~ile~~~~~i~i~D~~~~dg~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~ 250 (1005)
.....|||++++++++|+++++.|+.++++++++++++|. +|+|+++|+++++++||+.+|++|+++..+.++....
T Consensus 183 ~g~~~DIT~rk~ae~~l~~~~~~l~~l~e~~~~~i~~~d~---~g~i~~~N~~~~~~~G~~~~e~~g~~~~~~~~~~~~~ 259 (807)
T PRK13560 183 DGFAEDITERKRAEERIDEALHFLQQLLDNIADPAFWKDE---DAKVFGCNDAACLACGFRREEIIGMSIHDFAPAQPAD 259 (807)
T ss_pred EEEEEccchHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcC---CCCEEEEhHHHHHHhCCCHHHHcCCcchhcCCcchhH
Confidence 3455899999999999999999999999999999999998 7889999999999999999999999998887766544
Q ss_pred HHHHHHHHHHHcCCcEEEEEEEEecCCcEEEEEEEe--eeeecCCCCEEEEEEEEeccchhhHHHHHhhcCCCCCchhhh
Q 001847 251 EDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTI--APIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLI 328 (1005)
Q Consensus 251 ~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~wv~~~~--~pi~d~~G~v~~~v~~~~DITerk~~E~~L~~~~~~l~~~l~ 328 (1005)
.........+..+.....+.+++++||+.+|+.+.+ .|+.+.+|.+.+++++++|||++|++|++|+.+.+
T Consensus 260 ~~~~~~~~~~~~~~~~~~e~~~~~~dG~~~~~~~~~~~~~~~~~~g~~~g~~~~~~DITerk~~e~~L~~se~------- 332 (807)
T PRK13560 260 DYQEADAAKFDADGSQIIEAEFQNKDGRTRPVDVIFNHAEFDDKENHCAGLVGAITDISGRRAAERELLEKED------- 332 (807)
T ss_pred HHHHHHHHHhccCCceEEEEEEEcCCCCEEEEEEEecceEEEcCCCCEEEEEEEEEechHHHHHHHHHHHHHH-------
Confidence 443445556667777778888999999999776654 55678999999999999999999999999874211
Q ss_pred hHHHHHHHHhhhhHHHHHHH-ccCCCCcccCCCCCccc-ccCCCCchhhhcccccCCCCCCCCCCCCCC---------CC
Q 001847 329 RYDARQKEMATSSVTELVQA-MKKPRSLSESTNRPPII-RKSEGGVEEERAGALGRRKSENVPPPRRNS---------YG 397 (1005)
Q Consensus 329 ~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---------~~ 397 (1005)
+...+... -......+.......++ ..+...+|++..++.|+......|...... ..
T Consensus 333 ------------~l~~l~~~~~~~i~~~d~~g~i~~~nn~~~~~~~G~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (807)
T PRK13560 333 ------------MLRAIIEAAPIAAIGLDADGNICFVNNNAAERMLGWSAAEVMGKPLPGMDPELNEEFWCGDFQEWYPD 400 (807)
T ss_pred ------------HHHHHHHhCcccEEEEcCCCCEEEecCHHHHHHhCCCHHHHcCCCccccChhhhhhhhhchhhhcCCc
Confidence 11111111 11222233333333333 335668899999999988766554311100 00
Q ss_pred CCc-----------ccccccccccchhhccccCCcccccccccccccCCCCCCccccccccCCCCCCCCCCCCCchhhHH
Q 001847 398 GGC-----------RTSMQRISEVPEKKKQKSGRRSFMGLIGRKSQSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKV 466 (1005)
Q Consensus 398 ~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~er~~ 466 (1005)
+.. ................++|...|+...+.+..+.++.......+ ..|+|+|++
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~~~~~~~~p~~d~~g~~~~~~~~-------------~~DITerk~ 467 (807)
T PRK13560 401 GRPMAFDACPMAKTIKGGKIFDGQEVLIEREDDGPADCSAYAEPLHDADGNIIGAIAL-------------LVDITERKQ 467 (807)
T ss_pred CCcchhhhhhHHHHHhcCCcccCceEEEEcCCCCeEEEEEEEeeeECCCCCEEEEEEE-------------eehhhhHHH
Confidence 000 11111222334455667788888888888887777765544333 689999999
Q ss_pred HHHHHhhcccHHHHHHhccccEEEEcCCCCCCCEEeecHHHHHHcCCChhhhcCCC--CCccCCCCCCHHHHHHHHHHHh
Q 001847 467 RQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRN--CRFLQGPETDPATVRKIRAAID 544 (1005)
Q Consensus 467 ~e~~l~~~~~l~~i~e~~~~~I~i~D~~G~d~~i~~vN~a~~~l~Gy~~eEllG~~--~~~l~~~~~~~~~~~~i~~~l~ 544 (1005)
.|+++++ .+.++++++.+++.++..+ +..+.+|.....++||+++++++.. +..+++|++.......+...+.
T Consensus 468 ~E~~L~~---~~~~~e~~~~~i~~~~~~~--~~~~~~~~~~~~~~G~~~~e~~~~~~~~~~~~~p~d~~~~~~~~~~~~~ 542 (807)
T PRK13560 468 VEEQLLL---ANLIVENSPLVLFRWKAEE--GWPVELVSKNITQFGYEPDEFISGKRMFAAIIHPADLEQVAAEVAEFAA 542 (807)
T ss_pred HHHHHHH---HHHHHhcCCceEEEEecCC--CceEEEecchhhhcCCCHHHhhcccchHhhhcChhhHHHHHHHHHHHHh
Confidence 9999987 6789999999999887652 2245555666788999999998633 5567788887777777766665
Q ss_pred cC-CcEEEEEEEEecCCcEEEEEEEEeeeeCCCCCEEEEEEEEecCccCccccccCCchhhHHHHHHHHHHHhhhhhhhh
Q 001847 545 NQ-TDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNSIPEATAEESEKLVKQTAENVNEAV 623 (1005)
Q Consensus 545 ~~-~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerK~~e~~~~~~~~~~e~~~l~~~~~~~v~~~v 623 (1005)
.+ ..+..++++.++||..+|+.....|++|.+|.+.+++|+++|||++|++|+++ +++++++..++..++|.+++.+
T Consensus 543 ~g~~~~~~e~r~~~~dG~~~w~~~~~~~~~d~~G~~~~~~g~~~DITerK~aE~~L--~~a~~~~~~~l~~isHelrnpL 620 (807)
T PRK13560 543 QGVDRFEQEYRILGKGGAVCWIDDQSAAERDEEGQISHFEGIVIDISERKHAEEKI--KAALTEKEVLLKEIHHRVKNNL 620 (807)
T ss_pred cCCccceeEEEEEcCCCCEEEEEecceeeeCCCCCEEEEEEEEechHHHHHHHHHH--HHHHHHHHHHHHHhHHHHhChH
Confidence 55 45788999999999999999999999999999999999999999999965443 3455666666666666666654
Q ss_pred c
Q 001847 624 K 624 (1005)
Q Consensus 624 ~ 624 (1005)
.
T Consensus 621 ~ 621 (807)
T PRK13560 621 Q 621 (807)
T ss_pred H
Confidence 3
No 391
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.97 E-value=9e-31 Score=283.18 Aligned_cols=293 Identities=24% Similarity=0.344 Sum_probs=212.7
Q ss_pred hHHhhcccccccccCCccccccccccCcEEEEEEEEcC---CCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCC
Q 001847 658 AIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCG---SGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPF 733 (1005)
Q Consensus 658 ~~~~~~~~~~~i~~~~y~~~~~LG~G~~g~Vy~a~~~~---~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpn 733 (1005)
++.++......+ ...|+++.+||+|.|++||++.+.. ..+++|+|.+.... ...++.+|+++|..+ .+.|
T Consensus 23 e~~~l~q~~p~~-~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts-----~p~ri~~El~~L~~~gG~~n 96 (418)
T KOG1167|consen 23 EIEQLRQDIPFI-SNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS-----SPSRILNELEMLYRLGGSDN 96 (418)
T ss_pred HHHHHHhhhhhh-hhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc-----CchHHHHHHHHHHHhccchh
Confidence 344444444443 4689999999999999999999977 78899999887543 356789999999999 7999
Q ss_pred cceEEEEEEeCCeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEec-CCc
Q 001847 734 VPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGH 812 (1005)
Q Consensus 734 Iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~-~g~ 812 (1005)
|+.+.+++..++.+++||||++.....++... ++...++.+++.++.||.++|++|||||||||+|||++. .+.
T Consensus 97 i~~~~~~~rnnd~v~ivlp~~~H~~f~~l~~~-----l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~r 171 (418)
T KOG1167|consen 97 IIKLNGCFRNNDQVAIVLPYFEHDRFRDLYRS-----LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQR 171 (418)
T ss_pred hhcchhhhccCCeeEEEecccCccCHHHHHhc-----CCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCC
Confidence 99999999999999999999999999998865 788999999999999999999999999999999999985 478
Q ss_pred EEEEeccCCcccCCCCCC-----------CC-CcchhhhhcccCCCCC-ccc----ccccccccccccCCcccccccccC
Q 001847 813 VSLTDFDLSCLTSCKPQL-----------LL-PTTNEKKRRHKGQQNP-VFM----AEPMRASNSFVGTEEYIAPEIIAG 875 (1005)
Q Consensus 813 vkL~DFG~a~~~~~~~~~-----------~~-~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~gt~~y~aPE~l~~ 875 (1005)
-.|+|||+|-........ .. ...+.......+...+ ... ...........||++|+|||++..
T Consensus 172 g~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k 251 (418)
T KOG1167|consen 172 GVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFR 251 (418)
T ss_pred ceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhh
Confidence 999999998521111000 00 0000000000000000 000 011123345689999999999877
Q ss_pred C-CCCChhhHHHHHHHHHHHHcCCCCCCCCCh-HHHHHHHH--------------hCC---------------------C
Q 001847 876 A-GHTSAVDWWALGILLYEMLYGYTPFRGKTR-QKTFANIL--------------HKD---------------------L 918 (1005)
Q Consensus 876 ~-~~~~~sDIwSlGvll~eLltG~~Pf~~~~~-~~~~~~i~--------------~~~---------------------~ 918 (1005)
. .+++++||||.|++++.++++.+||..... ...+..+. .+. +
T Consensus 252 ~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~ 331 (418)
T KOG1167|consen 252 CPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETL 331 (418)
T ss_pred ccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhcc
Confidence 5 578899999999999999999999953211 11111100 011 0
Q ss_pred C----CC----------CCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCC
Q 001847 919 K----FP----------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 965 (1005)
Q Consensus 919 ~----~~----------~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~ 965 (1005)
. .+ .....+..+.+|+.+||..||.+|+| |+++|+||||...+
T Consensus 332 ~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRit----AEeALkHpFF~~~~ 388 (418)
T KOG1167|consen 332 HIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRIT----AEDALKHPFFDEAD 388 (418)
T ss_pred ChhhcccccccceeeccccccccHHHHHHHHHHccCChhhccc----HHHHhcCcCCcchh
Confidence 0 00 00113447889999999999999999 99999999999643
No 392
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.96 E-value=5.7e-30 Score=251.17 Aligned_cols=226 Identities=26% Similarity=0.387 Sum_probs=185.8
Q ss_pred cccccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceEEEEEEe
Q 001847 665 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQT 743 (1005)
Q Consensus 665 ~~~~i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~ 743 (1005)
.+-.+..+....+..||+|++|.|-+.++..+|...|+|.+.... +....+++.+|+.+..+. .+|++|.+++.+..
T Consensus 39 ~~~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tv--n~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~r 116 (282)
T KOG0984|consen 39 RNFEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATV--NSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFR 116 (282)
T ss_pred CccccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhc--ChHHHHHHHHhhhhhccCCCCCeEEEeehhhhc
Confidence 334455567777889999999999999999999999999998653 344556778888876665 89999999999999
Q ss_pred CCeEEEEEeccCCCchhhHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHc-CcccCCCCCCcEEEecCCcEEEEeccC
Q 001847 744 KTHVCLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDL 820 (1005)
Q Consensus 744 ~~~~~lV~E~~~ggsL~~~l~~--~~~~~l~~~~i~~i~~qil~aL~~LH~~-gIvHrDLkP~NILi~~~g~vkL~DFG~ 820 (1005)
...++|.||.| ..+|..+.++ ..++.+++..+-+|+..++.||.|||++ .+||||+||+||||+.+|++|+||||.
T Consensus 117 egdvwIcME~M-~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGI 195 (282)
T KOG0984|consen 117 EGDVWICMELM-DTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGI 195 (282)
T ss_pred cccEEEeHHHh-hhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEccccc
Confidence 99999999999 7788766543 2456799999999999999999999976 999999999999999999999999999
Q ss_pred CcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC----CCCCChhhHHHHHHHHHHHHc
Q 001847 821 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG----AGHTSAVDWWALGILLYEMLY 896 (1005)
Q Consensus 821 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~----~~~~~~sDIwSlGvll~eLlt 896 (1005)
+-+..++- ..+.-.|-..|||||.+.. ..|+.++||||||+++.||.+
T Consensus 196 sG~L~dSi----------------------------Akt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~ 247 (282)
T KOG0984|consen 196 SGYLVDSI----------------------------AKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAI 247 (282)
T ss_pred ceeehhhh----------------------------HHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhh
Confidence 85543211 1122467889999999844 367889999999999999999
Q ss_pred CCCCCCC-CChHHHHHHHHhCCCCCC
Q 001847 897 GYTPFRG-KTRQKTFANILHKDLKFP 921 (1005)
Q Consensus 897 G~~Pf~~-~~~~~~~~~i~~~~~~~~ 921 (1005)
+++||.. .++.+++..++....+..
T Consensus 248 lr~PY~~w~tpF~qLkqvVeep~P~L 273 (282)
T KOG0984|consen 248 LRFPYESWGTPFQQLKQVVEEPSPQL 273 (282)
T ss_pred ccccccccCCHHHHHHHHhcCCCCCC
Confidence 9999965 577888888887755443
No 393
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.96 E-value=5.8e-30 Score=295.42 Aligned_cols=252 Identities=28% Similarity=0.408 Sum_probs=200.1
Q ss_pred CccccccccccCcEE-EEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEEEE
Q 001847 673 HFRPIKPLGSGDTGS-VHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLI 750 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~-Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lV 750 (1005)
-|.-.+++|.|+.|+ ||++.. .|+.||||.+-.. ......+|+.+|+.- .||||++++..-.+....||.
T Consensus 510 ~~~~~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll~e------~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIa 581 (903)
T KOG1027|consen 510 FFSPKEILGYGSNGTVVFRGVY--EGREVAVKRLLEE------FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIA 581 (903)
T ss_pred eeccHHHcccCCCCcEEEEEee--CCceehHHHHhhH------hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEE
Confidence 355567789999875 799987 7889999977543 345667899999988 699999999888889999999
Q ss_pred EeccCCCchhhHHhhC-CC-CCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEec---CC--cEEEEeccCCcc
Q 001847 751 TDYCPGGELFLLLDRQ-PT-KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---NG--HVSLTDFDLSCL 823 (1005)
Q Consensus 751 ~E~~~ggsL~~~l~~~-~~-~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~---~g--~vkL~DFG~a~~ 823 (1005)
.|.| ..+|.+++... .. .....-..+.++.|++.||++||+.+||||||||.||||+. ++ .++|+|||+++.
T Consensus 582 lELC-~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKk 660 (903)
T KOG1027|consen 582 LELC-ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKK 660 (903)
T ss_pred ehHh-hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccc
Confidence 9999 88999999863 11 11111345778899999999999999999999999999986 33 689999999977
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcC-CCCCC
Q 001847 824 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYG-YTPFR 902 (1005)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG-~~Pf~ 902 (1005)
...+...+ .......||.+|+|||++.....+.++|||||||++|+.++| ..||.
T Consensus 661 l~~~~sS~------------------------~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFG 716 (903)
T KOG1027|consen 661 LAGGKSSF------------------------SRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFG 716 (903)
T ss_pred cCCCcchh------------------------hcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCC
Confidence 65433211 124556899999999999998888899999999999999985 89996
Q ss_pred CCChHHHHHHHHhCCCCCCCCCCC-CHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCC
Q 001847 903 GKTRQKTFANILHKDLKFPSSTPT-SLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 963 (1005)
Q Consensus 903 ~~~~~~~~~~i~~~~~~~~~~~~~-s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~ 963 (1005)
.... .-.+|+.+...+...... +.++.+||.+||.++|..||+ |.++|.||||=.
T Consensus 717 d~~~--R~~NIl~~~~~L~~L~~~~d~eA~dLI~~ml~~dP~~RPs----a~~VL~HPlFW~ 772 (903)
T KOG1027|consen 717 DSLE--RQANILTGNYTLVHLEPLPDCEAKDLISRMLNPDPQLRPS----ATDVLNHPLFWD 772 (903)
T ss_pred chHH--hhhhhhcCccceeeeccCchHHHHHHHHHhcCCCcccCCC----HHHHhCCCccCC
Confidence 5433 334667665544332211 127899999999999999999 999999999954
No 394
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.96 E-value=3.9e-29 Score=285.82 Aligned_cols=253 Identities=23% Similarity=0.296 Sum_probs=211.9
Q ss_pred CccccccccccCcEEEEEEEEcCCCe----EEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQ----YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 748 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~----~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 748 (1005)
..+..++||+|+||+||++.+...|+ +||+|++... ........+..|+.+|.+|+|||++++++++.... +.
T Consensus 697 elkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~--t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~q 773 (1177)
T KOG1025|consen 697 ELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEF--TSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQ 773 (1177)
T ss_pred hhhhhceeccccceeEEeeeEecCCceecceeEEEEeecc--CCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HH
Confidence 46677899999999999999965554 6888888754 23455678899999999999999999999988765 88
Q ss_pred EEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 001847 749 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 828 (1005)
Q Consensus 749 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~ 828 (1005)
||++|++.|+|.++++.++ ..+.......|..||++||.|||.+++|||||-..|||+.+-..+|+.|||+++....+.
T Consensus 774 lvtq~mP~G~LlDyvr~hr-~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~ 852 (1177)
T KOG1025|consen 774 LVTQLMPLGCLLDYVREHR-DNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDE 852 (1177)
T ss_pred HHHHhcccchHHHHHHHhh-ccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCccc
Confidence 9999999999999998753 558889999999999999999999999999999999999999999999999998765443
Q ss_pred CCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChH
Q 001847 829 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 907 (1005)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt-G~~Pf~~~~~~ 907 (1005)
..+ ......-.+.|||-|.+....++.++|||||||++|||+| |..||.+....
T Consensus 853 ~ey-------------------------~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~ 907 (1177)
T KOG1025|consen 853 KEY-------------------------SAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAE 907 (1177)
T ss_pred ccc-------------------------cccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHH
Confidence 221 1111224567999999999999999999999999999996 99999988766
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHH
Q 001847 908 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 955 (1005)
Q Consensus 908 ~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~el 955 (1005)
++- ++++..-.++.++.++.++..++.+||..|+..||++++.+.++
T Consensus 908 eI~-dlle~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~f 954 (1177)
T KOG1025|consen 908 EIP-DLLEKGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEF 954 (1177)
T ss_pred Hhh-HHHhccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHH
Confidence 654 45544445777788899999999999999999999987765554
No 395
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.96 E-value=2.3e-29 Score=278.72 Aligned_cols=203 Identities=31% Similarity=0.498 Sum_probs=176.8
Q ss_pred ccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHH-----HHHHHHHHHHHHhCC---CCCcceEEEEE
Q 001847 670 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK-----VHRACAEREILDMLD---HPFVPALYASF 741 (1005)
Q Consensus 670 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~-----~~~~~~E~~il~~l~---hpnIv~l~~~~ 741 (1005)
+..+|..++.||+|+||.|++|.++.+...|+||.+.+..+..... ...+--||.||..|+ |+||++++++|
T Consensus 559 k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfF 638 (772)
T KOG1152|consen 559 KFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFF 638 (772)
T ss_pred ccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhee
Confidence 3457999999999999999999999999999999998764432221 223446999999996 99999999999
Q ss_pred EeCCeEEEEEecc-CCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccC
Q 001847 742 QTKTHVCLITDYC-PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 820 (1005)
Q Consensus 742 ~~~~~~~lV~E~~-~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~ 820 (1005)
++++++||+||.. +|.+|++++... ..+++...+.|++|++.|+++||+.||||||||-+|++++++|-+||+|||.
T Consensus 639 Eddd~yyl~te~hg~gIDLFd~IE~k--p~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgs 716 (772)
T KOG1152|consen 639 EDDDYYYLETEVHGEGIDLFDFIEFK--PRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGS 716 (772)
T ss_pred ecCCeeEEEecCCCCCcchhhhhhcc--CccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeeccc
Confidence 9999999999998 477999999875 4499999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCC-CChhhHHHHHHHHHHHHcCCC
Q 001847 821 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYT 899 (1005)
Q Consensus 821 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~-~~~sDIwSlGvll~eLltG~~ 899 (1005)
|.... +.+.+.++||..|.|||++.+.+| +..-|||+||++||.++....
T Consensus 717 aa~~k-----------------------------sgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivyken 767 (772)
T KOG1152|consen 717 AAYTK-----------------------------SGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKEN 767 (772)
T ss_pred hhhhc-----------------------------CCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccC
Confidence 85532 233467899999999999998876 568899999999999999999
Q ss_pred CCCC
Q 001847 900 PFRG 903 (1005)
Q Consensus 900 Pf~~ 903 (1005)
||..
T Consensus 768 pyyn 771 (772)
T KOG1152|consen 768 PYYN 771 (772)
T ss_pred CCcC
Confidence 9864
No 396
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.96 E-value=1.2e-29 Score=285.36 Aligned_cols=286 Identities=26% Similarity=0.392 Sum_probs=233.7
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 750 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 750 (1005)
.++|.++..+|+|++|.||+++|+.+++..|+|+++.. ......-+.+|+-+++-++||||+.+++.|...+.+++.
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLe---p~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwic 90 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLE---PGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWIC 90 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeecc---CCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEE
Confidence 46899999999999999999999999999999999854 345566778899999999999999999999999999999
Q ss_pred EeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001847 751 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (1005)
Q Consensus 751 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 830 (1005)
||||.||+|.+.-.- .+++++.++..+++..++||+|||+.|-+|||||-.||++++.|.+||.|||.+..+.
T Consensus 91 MEycgggslQdiy~~--TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqit----- 163 (829)
T KOG0576|consen 91 MEYCGGGSLQDIYHV--TGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQIT----- 163 (829)
T ss_pred EEecCCCcccceeee--cccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhh-----
Confidence 999999999987643 5779999999999999999999999999999999999999999999999999884432
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccc---cCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001847 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII---AGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 907 (1005)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l---~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~ 907 (1005)
.....+.++.|||+|||||+. ....|...+|||++|++..++..-++|.....++
T Consensus 164 ----------------------ati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpm 221 (829)
T KOG0576|consen 164 ----------------------ATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPM 221 (829)
T ss_pred ----------------------hhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchH
Confidence 112234567899999999986 3456888999999999999999888888777777
Q ss_pred HHHHHHHhCCCCCCCC---CCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCCh-----hhhhhcCCCCCCC
Q 001847 908 KTFANILHKDLKFPSS---TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW-----ALVRCMNPPELDA 979 (1005)
Q Consensus 908 ~~~~~i~~~~~~~~~~---~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~~-----~~~~~~~~~~~~~ 979 (1005)
.....+-+..++.|.. ..-+..+-+|++.+|.++|.+||+ ++.+|.|||...--- .++-..+.|-..+
T Consensus 222 r~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRpt----aeklL~h~fvs~~l~~rl~~eLLdK~n~P~~~v 297 (829)
T KOG0576|consen 222 RALFLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPT----AEKLLQHPFVSQTLSRRLAIELLDKVNNPNPVV 297 (829)
T ss_pred HHHHHhhccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCC----hhhheeceeeccchhhHHHHHHHHHccCCCCcc
Confidence 6666665655544432 334667889999999999999999 999999999987421 1233334444444
Q ss_pred CCCCCcccccccc
Q 001847 980 PLFATDTEKEYKV 992 (1005)
Q Consensus 980 p~~~~~~~~~~~~ 992 (1005)
..+-.+.--+|..
T Consensus 298 ~~~~d~~~E~~~~ 310 (829)
T KOG0576|consen 298 RYLEDYDGEDYLW 310 (829)
T ss_pred cccccCCcccccc
Confidence 5544444444433
No 397
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.95 E-value=6.1e-28 Score=311.83 Aligned_cols=238 Identities=20% Similarity=0.306 Sum_probs=183.6
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 752 (1005)
.|.....||+|+||.||++.+..++..||+|.+..... ....|++++++++||||+++++++...+..|+|||
T Consensus 691 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~E 763 (968)
T PLN00113 691 SLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS-------IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHE 763 (968)
T ss_pred hCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc-------ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEe
Confidence 56777889999999999999988999999998864321 11235788999999999999999999999999999
Q ss_pred ccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH---HcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 001847 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH---CQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 829 (1005)
Q Consensus 753 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH---~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~ 829 (1005)
|+++|+|.+++.. +++..+..++.||+.||+||| +.+|+||||||+||+++.++..++. ||.+....
T Consensus 764 y~~~g~L~~~l~~-----l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~---- 833 (968)
T PLN00113 764 YIEGKNLSEVLRN-----LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLC---- 833 (968)
T ss_pred CCCCCcHHHHHhc-----CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccc----
Confidence 9999999999953 788999999999999999999 6699999999999999988887775 66442210
Q ss_pred CCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH-H
Q 001847 830 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ-K 908 (1005)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~-~ 908 (1005)
......|++.|+|||++.+..++.++|||||||++|||++|+.||...... .
T Consensus 834 ---------------------------~~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~ 886 (968)
T PLN00113 834 ---------------------------TDTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHG 886 (968)
T ss_pred ---------------------------cCCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCC
Confidence 011236789999999999888999999999999999999999998542110 0
Q ss_pred HHHHHHh---CC--------CCCCCC----CCCCHHHHHHHHHccccCcCccCCChhcHHH
Q 001847 909 TFANILH---KD--------LKFPSS----TPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 954 (1005)
Q Consensus 909 ~~~~i~~---~~--------~~~~~~----~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~e 954 (1005)
......+ .. ...... .....++.+++.+||+.+|++||++.++++.
T Consensus 887 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~ 947 (968)
T PLN00113 887 SIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKT 947 (968)
T ss_pred cHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence 0111110 00 000001 1112356789999999999999995554443
No 398
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.95 E-value=4.3e-27 Score=284.91 Aligned_cols=263 Identities=25% Similarity=0.351 Sum_probs=211.8
Q ss_pred cccccCCccccccccccCcEEEEEEEEcC-------CCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceEE
Q 001847 667 EQINLQHFRPIKPLGSGDTGSVHLVELCG-------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALY 738 (1005)
Q Consensus 667 ~~i~~~~y~~~~~LG~G~~g~Vy~a~~~~-------~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~ 738 (1005)
+.+......+.+.||+|+||.|+++.... ....||||.++.... ......+..|+++|+.+ .|+||+.++
T Consensus 291 ~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~--~~~~~~~~~El~~m~~~g~H~niv~ll 368 (609)
T KOG0200|consen 291 WEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENAS--SSEKKDLMSELNVLKELGKHPNIVNLL 368 (609)
T ss_pred eeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccC--cHHHHHHHHHHHHHHHhcCCcchhhhe
Confidence 34555556677799999999999998531 145789999886543 36678899999999999 699999999
Q ss_pred EEEEeCCeEEEEEeccCCCchhhHHhhCC-------C-------CCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCc
Q 001847 739 ASFQTKTHVCLITDYCPGGELFLLLDRQP-------T-------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 804 (1005)
Q Consensus 739 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~-------~-------~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~N 804 (1005)
+++...+.+++|+||+..|+|..+++... . ..++...+..++.||+.|+.||++.++|||||-..|
T Consensus 369 G~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRN 448 (609)
T KOG0200|consen 369 GACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARN 448 (609)
T ss_pred eeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhh
Confidence 99999999999999999999999998754 0 138899999999999999999999999999999999
Q ss_pred EEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccc--cCCcccccccccCCCCCChh
Q 001847 805 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFV--GTEEYIAPEIIAGAGHTSAV 882 (1005)
Q Consensus 805 ILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--gt~~y~aPE~l~~~~~~~~s 882 (1005)
||+..+..+||+|||+++....+.... ...-. -...|||||.+....++.++
T Consensus 449 VLi~~~~~~kIaDFGlar~~~~~~~y~--------------------------~~~~~~~LP~kWmApEsl~~~~ft~kS 502 (609)
T KOG0200|consen 449 VLITKNKVIKIADFGLARDHYNKDYYR--------------------------TKSSAGTLPVKWMAPESLFDRVFTSKS 502 (609)
T ss_pred EEecCCCEEEEccccceeccCCCCceE--------------------------ecCCCCccceeecCHHHhccCcccccc
Confidence 999999999999999996533221110 00001 23459999999999999999
Q ss_pred hHHHHHHHHHHHHc-CCCCCCCCC-hHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcC
Q 001847 883 DWWALGILLYEMLY-GYTPFRGKT-RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 958 (1005)
Q Consensus 883 DIwSlGvll~eLlt-G~~Pf~~~~-~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~h 958 (1005)
||||||++||||++ |..||.+.. ..+.+. .++.......+..++.++.++++.||+.+|++||++.+....+-.|
T Consensus 503 DVWSfGI~L~EifsLG~~PYp~~~~~~~l~~-~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~ 579 (609)
T KOG0200|consen 503 DVWSFGILLWEIFTLGGTPYPGIPPTEELLE-FLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH 579 (609)
T ss_pred hhhHHHHHHHHHhhCCCCCCCCCCcHHHHHH-HHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence 99999999999997 999999865 445544 4444444444445688999999999999999999988766665554
No 399
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=2.7e-27 Score=256.46 Aligned_cols=243 Identities=23% Similarity=0.356 Sum_probs=185.1
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHh--CCCCCcceEEEEEEeC----C
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDM--LDHPFVPALYASFQTK----T 745 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~--l~hpnIv~l~~~~~~~----~ 745 (1005)
.+..+.+.||+|-||.||++.+ .|..||||+|... .....++|.+|... |+|+||+.+++.=..+ .
T Consensus 211 rqI~L~e~IGkGRyGEVwrG~w--rGe~VAVKiF~sr------dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~T 282 (513)
T KOG2052|consen 211 RQIVLQEIIGKGRFGEVWRGRW--RGEDVAVKIFSSR------DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWT 282 (513)
T ss_pred heeEEEEEecCccccceeeccc--cCCceEEEEeccc------chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceE
Confidence 5678889999999999999999 6779999999753 23456677777655 5999999998764432 2
Q ss_pred eEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHc--------CcccCCCCCCcEEEecCCcEEEEe
Q 001847 746 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ--------GIIYRDLKPENVLLQGNGHVSLTD 817 (1005)
Q Consensus 746 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~--------gIvHrDLkP~NILi~~~g~vkL~D 817 (1005)
.+|||++|.+.|||+|||.+. .++.+....++..++.||++||.. .|+|||||..|||+.++|.+-|+|
T Consensus 283 QLwLvTdYHe~GSL~DyL~r~---tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IAD 359 (513)
T KOG2052|consen 283 QLWLVTDYHEHGSLYDYLNRN---TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 359 (513)
T ss_pred EEEEeeecccCCcHHHHHhhc---cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEee
Confidence 689999999999999999874 388999999999999999999974 399999999999999999999999
Q ss_pred ccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCC------CChhhHHHHHHHH
Q 001847 818 FDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH------TSAVDWWALGILL 891 (1005)
Q Consensus 818 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~------~~~sDIwSlGvll 891 (1005)
+|+|.....+.... ....+..+||..|||||+|...-. ...+||||||+++
T Consensus 360 LGLAv~h~~~t~~i-----------------------di~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVl 416 (513)
T KOG2052|consen 360 LGLAVRHDSDTDTI-----------------------DIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVL 416 (513)
T ss_pred ceeeEEecccCCcc-----------------------cCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHH
Confidence 99997655432211 112345689999999999965421 2379999999999
Q ss_pred HHHHc----------CCCCCCCC----ChHHHHHHHHh---CCCCCCCCCCCCH---HHHHHHHHccccCcCccCCC
Q 001847 892 YEMLY----------GYTPFRGK----TRQKTFANILH---KDLKFPSSTPTSL---HAKQLMYRLLHRDPKSRLGS 948 (1005)
Q Consensus 892 ~eLlt----------G~~Pf~~~----~~~~~~~~i~~---~~~~~~~~~~~s~---~l~~Ll~~~L~~dP~~Rpt~ 948 (1005)
||++. -++||.+- ...+.+.+++- -++..|....-.+ .+-++++.||..+|..|.|+
T Consensus 417 WEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltA 493 (513)
T KOG2052|consen 417 WEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTA 493 (513)
T ss_pred HHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHH
Confidence 99984 34677542 22344444432 2233333222222 34578999999999999993
No 400
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.95 E-value=1.5e-27 Score=260.34 Aligned_cols=244 Identities=23% Similarity=0.354 Sum_probs=188.0
Q ss_pred ccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC--CCCCcceEEEEEEeCC--
Q 001847 670 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML--DHPFVPALYASFQTKT-- 745 (1005)
Q Consensus 670 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l--~hpnIv~l~~~~~~~~-- 745 (1005)
+....+++..||+|.||.||++.. +++.||||++... ....+.+|..|.+.. +|+||++++++-+-..
T Consensus 208 ~l~pl~l~eli~~Grfg~V~KaqL--~~~~VAVKifp~~------~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~ 279 (534)
T KOG3653|consen 208 ELDPLQLLELIGRGRFGCVWKAQL--DNRLVAVKIFPEQ------EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTAD 279 (534)
T ss_pred cCCchhhHHHhhcCccceeehhhc--cCceeEEEecCHH------HHHHHHhHHHHHhccCccchhHHHhhchhccCCcc
Confidence 356778889999999999999998 6689999998643 456778888887664 8999999998766444
Q ss_pred --eEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHc---------CcccCCCCCCcEEEecCCcEE
Q 001847 746 --HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ---------GIIYRDLKPENVLLQGNGHVS 814 (1005)
Q Consensus 746 --~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~---------gIvHrDLkP~NILi~~~g~vk 814 (1005)
.++||++|.+.|+|.+||+.+ .+++.....++..+++||+|||+. .|+|||||..|||+.+|+++.
T Consensus 280 ~~eywLVt~fh~kGsL~dyL~~n---tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTcc 356 (534)
T KOG3653|consen 280 RMEYWLVTEFHPKGSLCDYLKAN---TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCC 356 (534)
T ss_pred ccceeEEeeeccCCcHHHHHHhc---cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEE
Confidence 789999999999999999875 389999999999999999999973 499999999999999999999
Q ss_pred EEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCC-CC-----ChhhHHHHH
Q 001847 815 LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HT-----SAVDWWALG 888 (1005)
Q Consensus 815 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~-~~-----~~sDIwSlG 888 (1005)
|+|||+|...... .+.......+||..|||||+|.+.. +. .+.||||+|
T Consensus 357 IaDFGLAl~~~p~-------------------------~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamg 411 (534)
T KOG3653|consen 357 IADFGLALRLEPG-------------------------KPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMG 411 (534)
T ss_pred eeccceeEEecCC-------------------------CCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHH
Confidence 9999999665311 1122334478999999999996642 11 378999999
Q ss_pred HHHHHHHcCCCC------------CC---C--CChHHHHHHHHh--CCCCCCCCCC---CCHHHHHHHHHccccCcCccC
Q 001847 889 ILLYEMLYGYTP------------FR---G--KTRQKTFANILH--KDLKFPSSTP---TSLHAKQLMYRLLHRDPKSRL 946 (1005)
Q Consensus 889 vll~eLltG~~P------------f~---~--~~~~~~~~~i~~--~~~~~~~~~~---~s~~l~~Ll~~~L~~dP~~Rp 946 (1005)
.+||||++.... |. | .+..+....+++ .++.++.... --..+.+.+..||..||+.|+
T Consensus 412 LVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARL 491 (534)
T KOG3653|consen 412 LVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARL 491 (534)
T ss_pred HHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhh
Confidence 999999974432 22 1 112222222232 3344443311 223567899999999999999
Q ss_pred CCh
Q 001847 947 GSH 949 (1005)
Q Consensus 947 t~~ 949 (1005)
|+-
T Consensus 492 TA~ 494 (534)
T KOG3653|consen 492 TAG 494 (534)
T ss_pred hhH
Confidence 954
No 401
>PRK09776 putative diguanylate cyclase; Provisional
Probab=99.95 E-value=2.3e-27 Score=310.85 Aligned_cols=380 Identities=15% Similarity=0.137 Sum_probs=272.3
Q ss_pred ccccccccccchHHHHHHHHHhcCCeEEEEeCCCCCCcEEEccHHHHHHcCCChhhhcCCCCCcCCCCCCChHHHHHHHH
Q 001847 179 DEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRE 258 (1005)
Q Consensus 179 ~~~~~e~~L~~~~~~l~~ile~~~~~i~i~D~~~~dg~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~ 258 (1005)
.++..++.|++++++++.++++++++|+++|. +|+|+++|+++++++||+.+|++|+++..+.++++.......+..
T Consensus 270 ~~r~~~~~l~~~e~r~~~l~e~~~~~i~~~d~---dG~i~~~N~~~~~l~G~~~~el~g~~~~~~~~~~d~~~~~~~~~~ 346 (1092)
T PRK09776 270 AFRAERKHISESETRFRNAMEYSAIGMALVGT---EGQWLQVNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEK 346 (1092)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCceEEEEcC---CCcEEehhHHHHHHhCCCHHHHccCCceeccCcchhHhHHHHHHH
Confidence 34445667889999999999999999999998 888999999999999999999999998888777766555555555
Q ss_pred HHHcC-CcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhhcCCCCCchhhhhHHHHHHHH
Q 001847 259 TLQNG-QSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEM 337 (1005)
Q Consensus 259 ~l~~g-~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~v~~~v~~~~DITerk~~E~~L~~~~~~l~~~l~~~~~~~~~~ 337 (1005)
.+..+ ..+..+.+..++||+.+|+..+..++++.+|.+.+++++++|||++|++|++++...+
T Consensus 347 ~~~~~~~~~~~e~~~~~~dG~~~~~~~~~~~~~~~~g~~~~~i~~~~DITerk~~e~~l~~~~~---------------- 410 (1092)
T PRK09776 347 LLSGEINSYSMEKRYYRRDGEVVWALLAVSLVRDTDGTPLYFIAQIEDINELKRTEQVNERLME---------------- 410 (1092)
T ss_pred HHcCCccceeeeeEEEcCCCCEEEEEEEEEEEECCCCCEeeehhhHHhhHHHHHHHHHHHHHHH----------------
Confidence 54443 3467888999999999999999999999999999999999999999999988773111
Q ss_pred hhhhHHHHHHH-ccCCCCcccCCCCCcccccCCCCchhhhcccccCCCCCCCCCCCCCCCCC---Ccccccccccccchh
Q 001847 338 ATSSVTELVQA-MKKPRSLSESTNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGG---GCRTSMQRISEVPEK 413 (1005)
Q Consensus 338 ~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 413 (1005)
+...+... -...+..+.......+|......+|++.++..+...-..+-++....... ............+.+
T Consensus 411 ---~~~~~~~~~~~~i~~~d~~~~~~~~n~~~~~l~G~~~~~~~~~~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~e~r 487 (1092)
T PRK09776 411 ---RITLANEAGGIGIWEWDLKPNIISWDKRMFELYEIPPHIKPTWQVWYACLHPEDRQRVEKEIRDALQGRSPFKLEFR 487 (1092)
T ss_pred ---HHHHHHHhcCceEEEEecCCCeEeeCHHHHHHhCCCcccCCCHHHHHHhcCHhHHHHHHHHHHHHHhcCCCeeEEEE
Confidence 11111111 11222333333344445444444555443322211000000000000000 000011122345566
Q ss_pred hccccCCcccccccccccccCCCCCCccccccccCCCCCCCCCCCCCchhhHHHHHHHhhc-ccHHHHHHhccccEEEEc
Q 001847 414 KKQKSGRRSFMGLIGRKSQSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKG-IDLATTLERIEKNFVITD 492 (1005)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~er~~~e~~l~~~-~~l~~i~e~~~~~I~i~D 492 (1005)
...++| ..|+...+.+..+.++.......+ ..|+|+|++.++++++. ..++.++++++++|+++|
T Consensus 488 ~~~~dG-~~w~~~~~~~~~d~~G~~~~~ig~-------------~~DITerk~~e~~L~~~~~~l~~~l~~~~~~i~~~D 553 (1092)
T PRK09776 488 IVVKDG-VRHIRALANRVLNKDGEVERLLGI-------------NMDMTEVRQLNEALFQEKERLHITLDSIGEAVVCTD 553 (1092)
T ss_pred EEcCCc-eEEEEEeeEEEECCCCCEEEEEee-------------eeehhHHHHHHHHHHHHHHHHHHHHhccccEEEEEC
Confidence 678888 888888887777766665443333 68999999999999877 679999999999999999
Q ss_pred CCCCCCCEEeecHHHHHHcCCChhhhcCCCCCccCCCC--CCHHHHHHHHHHHhcCCc--EEEEEEEEecCCcEEEEEEE
Q 001847 493 PRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPE--TDPATVRKIRAAIDNQTD--VTVQLINYTKSGKKFWNLFH 568 (1005)
Q Consensus 493 ~~G~d~~i~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~--~~~~~~~~i~~~l~~~~~--~~~e~~~~~kdG~~~wv~~~ 568 (1005)
.+|. |+++|+++++++||+.+|++|+++..+.+.. ........+......... ...+....++||..+|+..+
T Consensus 554 ~~g~---i~~~N~a~~~l~G~~~~e~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 630 (1092)
T PRK09776 554 MAMK---VTFMNPVAEKMTGWTQEEALGVPLLTVLHITFGDNGPLMENIYSCLTSRSAAYLEQDVVLHCRSGGSYDVHYS 630 (1092)
T ss_pred CCCe---EEEEcHHHHHHhCCCHHHHcCCCHHHHcccccCCcchhhHHHHHHHhcCCCccccceEEEEeCCCcEEEEEEE
Confidence 9888 9999999999999999999999966554322 122222334444444433 56677889999999999999
Q ss_pred EeeeeCCCCCEEEEEEEEecCccCccccc
Q 001847 569 LQPMRDQKGEVQYFIGVQLDGSEHLEPLR 597 (1005)
Q Consensus 569 ~~pi~d~~G~v~~~vgi~~DITerK~~e~ 597 (1005)
..|+++.+|++.+++++++|||++|+.++
T Consensus 631 ~~pi~~~~g~~~g~v~~~~DITe~k~~e~ 659 (1092)
T PRK09776 631 ITPLSTLDGENIGSVLVIQDVTESRKMLR 659 (1092)
T ss_pred eeeeecCCCCEEEEEEEEEecchHHHHHH
Confidence 99999999999999999999999998543
No 402
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.94 E-value=1.4e-25 Score=234.07 Aligned_cols=213 Identities=39% Similarity=0.646 Sum_probs=184.3
Q ss_pred ccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCCch
Q 001847 680 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 759 (1005)
Q Consensus 680 LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ggsL 759 (1005)
||+|++|.||++.+..+++.+++|.+....... ....+.+|+.+++.+.|++|+++++++......+++|||+.+++|
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~--~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l 78 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS--LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSL 78 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh--HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcH
Confidence 689999999999998889999999987653211 346788999999999999999999999999999999999988999
Q ss_pred hhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEec-CCcEEEEeccCCcccCCCCCCCCCcchhh
Q 001847 760 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLSCLTSCKPQLLLPTTNEK 838 (1005)
Q Consensus 760 ~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~-~g~vkL~DFG~a~~~~~~~~~~~~~~~~~ 838 (1005)
.+++.... ..++...+..++.+++.+|.+||+.|++|+||+|.||+++. ++.++|+|||.+........
T Consensus 79 ~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~--------- 148 (215)
T cd00180 79 KDLLKENE-GKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS--------- 148 (215)
T ss_pred HHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc---------
Confidence 99987642 35899999999999999999999999999999999999999 89999999998854321110
Q ss_pred hhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCC
Q 001847 839 KRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKD 917 (1005)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~~i~~~~ 917 (1005)
......+...|++||.+... ..+.+.|+|+||+++++|
T Consensus 149 ------------------~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l----------------------- 187 (215)
T cd00180 149 ------------------LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL----------------------- 187 (215)
T ss_pred ------------------hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH-----------------------
Confidence 12234578899999998776 778899999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCC
Q 001847 918 LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHP 959 (1005)
Q Consensus 918 ~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hp 959 (1005)
..+.+++.+||..+|++||+ +.++++|+
T Consensus 188 ----------~~~~~~l~~~l~~~p~~R~~----~~~l~~~~ 215 (215)
T cd00180 188 ----------PELKDLIRKMLQKDPEKRPS----AKEILEHL 215 (215)
T ss_pred ----------HHHHHHHHHHhhCCcccCcC----HHHHhhCC
Confidence 46889999999999999999 89998875
No 403
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.93 E-value=6e-25 Score=233.20 Aligned_cols=215 Identities=37% Similarity=0.610 Sum_probs=179.9
Q ss_pred ccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEec
Q 001847 674 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 753 (1005)
Q Consensus 674 y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~ 753 (1005)
|.+.+.||.|++|.||++.+..+++.+++|.+...... .....+.+|+..++.++|+|++++++++......++++||
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~ 78 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE--KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEY 78 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch--HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEec
Confidence 67788999999999999999888999999998865322 2567888899999999999999999999998999999999
Q ss_pred cCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCC
Q 001847 754 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 833 (1005)
Q Consensus 754 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~ 833 (1005)
+.+++|.+++...... ++...+..++.+++.+|.+||+.+++|+||+|+||+++.++.++|+|||.+.......
T Consensus 79 ~~~~~L~~~~~~~~~~-~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~----- 152 (225)
T smart00221 79 CEGGDLFDYLRKKGGK-LSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDL----- 152 (225)
T ss_pred cCCCCHHHHHHhcccC-CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcc-----
Confidence 9999999999764321 7899999999999999999999999999999999999999999999999885532111
Q ss_pred cchhhhhcccCCCCCcccccccccccccccCCcccccccc-cCCCCCChhhHHHHHHHHHHHHcCCCCCCC-CChH-HHH
Q 001847 834 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII-AGAGHTSAVDWWALGILLYEMLYGYTPFRG-KTRQ-KTF 910 (1005)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l-~~~~~~~~sDIwSlGvll~eLltG~~Pf~~-~~~~-~~~ 910 (1005)
........++..|++||.+ ....++.++|+|+||+++|+|++|+.||.. .... ...
T Consensus 153 ---------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~ 211 (225)
T smart00221 153 ---------------------AALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLS 211 (225)
T ss_pred ---------------------cccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHH
Confidence 0011234678889999998 666777899999999999999999999977 4444 555
Q ss_pred HHHHhCC
Q 001847 911 ANILHKD 917 (1005)
Q Consensus 911 ~~i~~~~ 917 (1005)
..+..+.
T Consensus 212 ~~~~~~~ 218 (225)
T smart00221 212 DVWSFGV 218 (225)
T ss_pred HHHhcCC
Confidence 5555554
No 404
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.93 E-value=2.2e-26 Score=234.32 Aligned_cols=255 Identities=23% Similarity=0.329 Sum_probs=193.9
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceEEEE-EEeCCeEE
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYAS-FQTKTHVC 748 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~-~~~~~~~~ 748 (1005)
.+.|.+.+.||+|.||.+.+|+++.++..+|+|.+.... -...++.+|...---| .|.||+.-|+. |+..+.++
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~----tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~Yv 98 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ----TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYV 98 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch----hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEE
Confidence 368999999999999999999999999999999988753 3456677776554444 58899987764 67778889
Q ss_pred EEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEec--CCcEEEEeccCCcccCC
Q 001847 749 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG--NGHVSLTDFDLSCLTSC 826 (1005)
Q Consensus 749 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~--~g~vkL~DFG~a~~~~~ 826 (1005)
+++||++.|+|..-+... .+-+...+.++.|+++|+.|||++++||||||.+||||-. ...+||||||.+...+.
T Consensus 99 F~qE~aP~gdL~snv~~~---GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~ 175 (378)
T KOG1345|consen 99 FVQEFAPRGDLRSNVEAA---GIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGT 175 (378)
T ss_pred EeeccCccchhhhhcCcc---cccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCc
Confidence 999999999998877653 3788899999999999999999999999999999999953 35899999999855431
Q ss_pred CCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-----CCCChhhHHHHHHHHHHHHcCCCCC
Q 001847 827 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-----GHTSAVDWWALGILLYEMLYGYTPF 901 (1005)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-----~~~~~sDIwSlGvll~eLltG~~Pf 901 (1005)
.- ...-.+..|.+||.+... ...+.+|||.||+++|.+++|++||
T Consensus 176 tV------------------------------~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PW 225 (378)
T KOG1345|consen 176 TV------------------------------KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPW 225 (378)
T ss_pred ee------------------------------hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcc
Confidence 10 112345678999986432 3467899999999999999999999
Q ss_pred CCCC----hHHHHHHHHhCC-CCCCC-CCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCC
Q 001847 902 RGKT----RQKTFANILHKD-LKFPS-STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 963 (1005)
Q Consensus 902 ~~~~----~~~~~~~i~~~~-~~~~~-~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~ 963 (1005)
.... ....+....++. +..|. ....+..+.+++++-|..+|+.|-...+ ++......|...
T Consensus 226 Qka~~~d~~Y~~~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~-~kk~rk~~w~E~ 292 (378)
T KOG1345|consen 226 QKASIMDKPYWEWEQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWT-AKKMRKCLWKEK 292 (378)
T ss_pred hhhhccCchHHHHHHHhcccCccCchhhcccCHHHHHHHHHhcCCcccccchhHH-HHHHHHHHHHHh
Confidence 7532 223344444443 33333 2457889999999999999999944222 445555555443
No 405
>TIGR02040 PpsR-CrtJ transcriptional regulator PpsR. This model represents the transcriptional regulator PpsR which is strictly associated with photosynthetic proteobacteria and found in photosynthetic operons. PpsR has been reported to be a repressor. These proteins contain a Helix-Turn_Helix motif of the "fis" type (pfam02954).
Probab=99.92 E-value=4.8e-25 Score=259.82 Aligned_cols=359 Identities=13% Similarity=0.038 Sum_probs=225.0
Q ss_pred HHhcCCeEEEEeCCCCCCcEEEccHHHHHHcCCChhhhcCCCCCcCCCCCCChHHHHHHHHHHHcCC-cEEEEEEEEecC
Q 001847 198 LSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ-SYCGRLLNYKKD 276 (1005)
Q Consensus 198 le~~~~~i~i~D~~~~dg~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~-~~~~e~~~~~kd 276 (1005)
+++++|+++++|. +|+|++||.+++.++||+.+|++|+++..+++++........+...+..+. .+..+..+..++
T Consensus 2 ~~~~~d~~~~~d~---~g~i~~~n~~~~~~~g~~~~el~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 78 (442)
T TIGR02040 2 LATAADVTLLLDA---EGVVREVAANPHHPSFEQLSEWEGRRWEEIVTAESVEKFELRLSEALRTGRGAVRVELNHIDPS 78 (442)
T ss_pred CcccCcEEEEECC---CCcEEEEEECCCcccccccccCCCCcHhHhhCcchHHHHHHHHHHHhccCCCcceEeeccCCCC
Confidence 5788999999999 777999999999999999999999999888887665555555656666654 455666666677
Q ss_pred CcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhhcCCCCCchhhhhHHHHHHHHhhhhHHHHHHHc-cCCCCc
Q 001847 277 GTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTELVQAM-KKPRSL 355 (1005)
Q Consensus 277 G~~~wv~~~~~pi~d~~G~v~~~v~~~~DITerk~~E~~L~~~~~~l~~~l~~~~~~~~~~~~~~~~~l~~~~-~~~~~~ 355 (1005)
|..+|+.++..++.+ + .+++++.+|||++++.+.+|...... ++.+.......+++...+.... ..+.-.
T Consensus 79 g~~~~~~~~~~~~~~--~--~~~~~i~rDi~~~~~~~~~l~~~~~~-----~e~~~~~l~~~e~r~~~l~e~~~~~i~~~ 149 (442)
T TIGR02040 79 SFELPMRFILVRLGA--D--RGVLALGRDLRAVAELQQQLVAAQQA-----MERDYWTLREMETRYRVVLEVSSDAVLLV 149 (442)
T ss_pred CCccCeEEEEEEeCC--C--CeEEEEecccHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHhhCCceEEEE
Confidence 777788777777644 2 26688999999988876554210000 0000001111112222222222 222333
Q ss_pred cc-CCCCCcccccCCCCchhhhcccccCCCCCCCCCCCCCCCCC---CcccccccccccchhhccccCCccccccccccc
Q 001847 356 SE-STNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGG---GCRTSMQRISEVPEKKKQKSGRRSFMGLIGRKS 431 (1005)
Q Consensus 356 ~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (1005)
+. .-....+|..+...+|++.++++|++..++++......... .....+. . .........+...| .+.+...
T Consensus 150 d~~~g~i~~~N~a~~~l~G~~~~el~g~~~~~~~~~~~~~~~~~~l~~~~~~g~-~--~~~~~~~~~~~~~~-~~~~~~~ 225 (442)
T TIGR02040 150 DMSTGRIVEANSAAAALLGGVGQSLVGRAFPQEFEGRRREELMLTLRNVRATGS-A--APVRILLRRSQKRL-LVVVSVF 225 (442)
T ss_pred ECCCCEEEEEcHHHHHHhCcCHHHHcCCCHHHhCCHHHHHHHHHHHHHHHhcCC-C--cceEEEEcCCCeEE-EEEEEEE
Confidence 32 23344577778888999999999999888775421110000 0000000 0 01111111111111 1111111
Q ss_pred ccCCCCCCccccccccCCCCCCCCCCCCCchhhHHHHHHHhhcccHHHHHHhccccEEEEcCCCCCCCEEeecHHHHHHc
Q 001847 432 QSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELT 511 (1005)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~er~~~e~~l~~~~~l~~i~e~~~~~I~i~D~~G~d~~i~~vN~a~~~l~ 511 (1005)
.. ++...++. ...|++++++.+++++ ..|+.+|++++++|+++|.+|. |+++|++|++++
T Consensus 226 ~~-~~~~~~l~--------------~~~dit~~~~~e~~~~--~~~~~l~e~~~d~I~v~D~~G~---I~~~N~a~~~l~ 285 (442)
T TIGR02040 226 RQ-DGESLFLC--------------QLSPAGATQPVGDELS--ENLARLYHEAPDAIVFSDADGT---IRGANEAFLELT 285 (442)
T ss_pred Ee-CCceEEEE--------------EEcccchhhhhhHHHH--HHHHHHHHhCCceEEEEcCCCc---EEehhHHHHHHh
Confidence 11 11111111 2345677776665553 2599999999999999999888 999999999999
Q ss_pred CCC-hhhhcCCCCCccCCCCCCHHHHHHHHHHHhcCCcEEEEEEEEecCCcEEEEEEEEeeeeCCCCCEEEEEEEEecCc
Q 001847 512 EYS-REEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGS 590 (1005)
Q Consensus 512 Gy~-~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DIT 590 (1005)
||+ .++++|+++..+.++.... ....+......+.....+..+.++||+.+|+.++..|+.+..+ ..++++++|||
T Consensus 286 G~~~~~~l~G~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~ve~s~~~i~~~~~--~~~~~v~rDIT 362 (442)
T TIGR02040 286 DSSSLEAVRGRTLDRWLGRGGVD-LRVLLSNVRRTGQVRLYATTLTGEFGAQTEVEISAAWVDQGER--PLIVLVIRDIS 362 (442)
T ss_pred CCCChHHHcCCCHHHHhCCCccc-HHHHHHHHhhcCceEEEEEEEEcCCCCEEEEEEEEEEeccCCc--eEEEEEEecch
Confidence 997 5789999976665543222 2222333334444455677888999999999999999986554 46789999999
Q ss_pred cCccc
Q 001847 591 EHLEP 595 (1005)
Q Consensus 591 erK~~ 595 (1005)
+||+.
T Consensus 363 eR~~~ 367 (442)
T TIGR02040 363 RRLTM 367 (442)
T ss_pred hhccC
Confidence 99986
No 406
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.92 E-value=2.4e-25 Score=280.38 Aligned_cols=227 Identities=19% Similarity=0.269 Sum_probs=154.5
Q ss_pred CCC-CCcceEEEEEE-------eCCeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCC
Q 001847 729 LDH-PFVPALYASFQ-------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDL 800 (1005)
Q Consensus 729 l~h-pnIv~l~~~~~-------~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDL 800 (1005)
+.| +||+.++++|. ....++++|||+ +++|.+++... ...++...++.++.||+.||.|||++||+||||
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDl 106 (793)
T PLN00181 29 LSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP-DRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNV 106 (793)
T ss_pred hhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc-cccccHHHHHHHHHHHHHHHHHHHhCCeeeccC
Confidence 344 57777777772 334678899998 77999999753 345999999999999999999999999999999
Q ss_pred CCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch-hhhhcccCCC-CC-----cccccc-cccccccccCCccccccc
Q 001847 801 KPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN-EKKRRHKGQQ-NP-----VFMAEP-MRASNSFVGTEEYIAPEI 872 (1005)
Q Consensus 801 kP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~-~~~~~~~~~~-~~-----~~~~~~-~~~~~~~~gt~~y~aPE~ 872 (1005)
||+||||+..|.+|++|||++.....+........+ +..+...... .. .....+ .......+||+.|+|||+
T Consensus 107 KP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~ 186 (793)
T PLN00181 107 RPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEE 186 (793)
T ss_pred CchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhh
Confidence 999999988788888888776543221110000000 0000000000 00 000000 011223578999999999
Q ss_pred ccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcH
Q 001847 873 IAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGA 952 (1005)
Q Consensus 873 l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a 952 (1005)
+.+..++.++|||||||+||||++|..|+.... ..+..+.....+ +..........+++.+||.++|.+||+ +
T Consensus 187 ~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~L~~~P~~Rps----~ 259 (793)
T PLN00181 187 DNGSSSNCASDVYRLGVLLFELFCPVSSREEKS--RTMSSLRHRVLP-PQILLNWPKEASFCLWLLHPEPSCRPS----M 259 (793)
T ss_pred hccCCCCchhhhhhHHHHHHHHhhCCCchhhHH--HHHHHHHHhhcC-hhhhhcCHHHHHHHHHhCCCChhhCcC----h
Confidence 999999999999999999999999988875422 122222222111 111122445678999999999999999 9
Q ss_pred HHHHcCCCCCCC
Q 001847 953 NEIKKHPFFKGV 964 (1005)
Q Consensus 953 ~elL~hpff~~~ 964 (1005)
.++|+||||...
T Consensus 260 ~eil~h~~~~~~ 271 (793)
T PLN00181 260 SELLQSEFINEP 271 (793)
T ss_pred HHHhhchhhhhh
Confidence 999999999864
No 407
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.91 E-value=4.3e-24 Score=227.23 Aligned_cols=254 Identities=17% Similarity=0.159 Sum_probs=203.1
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCC-----eEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEE-
Q 001847 669 INLQHFRPIKPLGSGDTGSVHLVELCGSG-----QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ- 742 (1005)
Q Consensus 669 i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~-----~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~- 742 (1005)
+...++++...+.+|.||.||.+.+.+.+ +.+.+|.++... .+-....+..|..++..+.|||+..+.++..
T Consensus 281 v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~A--S~iQv~~~L~es~lly~~sH~nll~V~~V~ie 358 (563)
T KOG1024|consen 281 VQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHA--SQIQVNLLLQESMLLYGASHPNLLSVLGVSIE 358 (563)
T ss_pred hhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcc--cHHHHHHHHHHHHHHhcCcCCCccceeEEEee
Confidence 44567889999999999999999775443 235566655432 3455678888999999999999999988765
Q ss_pred eCCeEEEEEeccCCCchhhHHhhC------CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEE
Q 001847 743 TKTHVCLITDYCPGGELFLLLDRQ------PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLT 816 (1005)
Q Consensus 743 ~~~~~~lV~E~~~ggsL~~~l~~~------~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~ 816 (1005)
+....++++.++.-|+|..++... ..+.++..++..++.|++.|++|||+.||||.||-..|.+|++.-++||+
T Consensus 359 ~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVklt 438 (563)
T KOG1024|consen 359 DYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLT 438 (563)
T ss_pred ccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEec
Confidence 456788999999999999999732 22347778888999999999999999999999999999999999999999
Q ss_pred eccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc
Q 001847 817 DFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY 896 (1005)
Q Consensus 817 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLlt 896 (1005)
|=.+++..=+ .++ .-..+...-...||+||.+....++.++|+||||++||||++
T Consensus 439 DsaLSRDLFP------~DY-------------------hcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmt 493 (563)
T KOG1024|consen 439 DSALSRDLFP------GDY-------------------HCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMT 493 (563)
T ss_pred cchhccccCc------ccc-------------------cccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHh
Confidence 9998853211 000 001122234567999999999999999999999999999997
Q ss_pred -CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChh
Q 001847 897 -GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 950 (1005)
Q Consensus 897 -G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~ 950 (1005)
|+.||...++.+...-+..+ ..+..+.+++.++..++..||...|++||++.+
T Consensus 494 lg~~PyaeIDPfEm~~ylkdG-yRlaQP~NCPDeLf~vMacCWallpeeRPsf~Q 547 (563)
T KOG1024|consen 494 LGKLPYAEIDPFEMEHYLKDG-YRLAQPFNCPDELFTVMACCWALLPEERPSFSQ 547 (563)
T ss_pred cCCCCccccCHHHHHHHHhcc-ceecCCCCCcHHHHHHHHHHHhcCcccCCCHHH
Confidence 99999999988876655544 455556678999999999999999999999543
No 408
>PRK13560 hypothetical protein; Provisional
Probab=99.91 E-value=9.5e-24 Score=267.97 Aligned_cols=379 Identities=10% Similarity=0.043 Sum_probs=264.7
Q ss_pred cccccccccccchHHHH-HHHHHhcCCeEEEEeCCCCCCcE--EEccHHHHHHcCCChhhhcCCC--CCcCCCCCCChHH
Q 001847 178 SDEGGKEKGLPRVSDIV-KDALSTFQQTFVVSDATKPDYPI--MYASAGFFKMTGYTSKEVVGRN--CRFLQGAGTDPED 252 (1005)
Q Consensus 178 t~~~~~e~~L~~~~~~l-~~ile~~~~~i~i~D~~~~dg~I--~~vN~a~~~l~Gys~eEllG~~--~~~l~~~~~~~~~ 252 (1005)
+.|+.++.+|+++++.+ +.+++++|+++++++..+ +|.+ .+++.++..++||...++++.. +..+.+|++....
T Consensus 53 ~~r~~~~~~l~~~~e~~~r~l~~~~p~~i~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~d~~~~ 131 (807)
T PRK13560 53 DARAIAEAEAQDCREQCERNLKANIPGGMFLFALDG-DGTFSFPSLLDANGELAAIAKHDLMADKGLLAMLIGGDDGDFF 131 (807)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEEcC-ccccccceeeccchhHHHhcCcccCCccchhhhhcCCCcchhh
Confidence 34566788888888888 999999999999998732 3443 3478888888898888877543 3345666655433
Q ss_pred H-------HHHHHHHHcCCcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhhcCCCCCch
Q 001847 253 V-------AKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPE 325 (1005)
Q Consensus 253 ~-------~~i~~~l~~g~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~v~~~v~~~~DITerk~~E~~L~~~~~~l~~ 325 (1005)
+ +.+..++..+.....+++++++||+ |+.....|.++.+|.+ .+.|+++|||++|++|++|+.+.+
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~e~r~~~~dg~--~~~~~~~~~~~~~g~~-~~~g~~~DIT~rk~ae~~l~~~~~---- 204 (807)
T PRK13560 132 FANPFRSAETIAMALQSDDWQEEEGHFRCGDGR--FIDCCLRFERHAHADD-QVDGFAEDITERKRAEERIDEALH---- 204 (807)
T ss_pred hhChhhHHHHHHHHhccCcccceEEEEEeCCcc--EEEEEeeeeecCCCce-EEEEEEEccchHHHHHHHHHHHHH----
Confidence 3 2333344455556678888999996 6677788888888876 689999999999999988773111
Q ss_pred hhhhHHHHHHHHhhhhHHHHHH-HccCCCCcccCCCCCcccccCCCCchhhhcccccCCCCCCCCCCCCCCCCC--Cccc
Q 001847 326 SLIRYDARQKEMATSSVTELVQ-AMKKPRSLSESTNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGG--GCRT 402 (1005)
Q Consensus 326 ~l~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~ 402 (1005)
....+.. .-......+..-..+.+|......+|++.++++|++..++.|......... ....
T Consensus 205 ---------------~l~~l~e~~~~~i~~~d~~g~i~~~N~~~~~~~G~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~ 269 (807)
T PRK13560 205 ---------------FLQQLLDNIADPAFWKDEDAKVFGCNDAACLACGFRREEIIGMSIHDFAPAQPADDYQEADAAKF 269 (807)
T ss_pred ---------------HHHHHHhhCCCeEEEEcCCCCEEEEhHHHHHHhCCCHHHHcCCcchhcCCcchhHHHHHHHHHHh
Confidence 1111111 112223345555667788889999999999999999999887633221100 0000
Q ss_pred ccccccccchhhccccCCcccccccc--cccccCCCCCCccccccccCCCCCCCCCCCCCchhhHHHHHHHhhc-ccHHH
Q 001847 403 SMQRISEVPEKKKQKSGRRSFMGLIG--RKSQSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKG-IDLAT 479 (1005)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~er~~~e~~l~~~-~~l~~ 479 (1005)
.......++.....++|+..|+.+.. .+..+.++....... ...|+|+|++.+++++++ ..|+.
T Consensus 270 ~~~~~~~~e~~~~~~dG~~~~~~~~~~~~~~~~~~g~~~g~~~-------------~~~DITerk~~e~~L~~se~~l~~ 336 (807)
T PRK13560 270 DADGSQIIEAEFQNKDGRTRPVDVIFNHAEFDDKENHCAGLVG-------------AITDISGRRAAERELLEKEDMLRA 336 (807)
T ss_pred ccCCceEEEEEEEcCCCCEEEEEEEecceEEEcCCCCEEEEEE-------------EEEechHHHHHHHHHHHHHHHHHH
Confidence 11112234455667788877554443 333343433332222 367999999999999877 67999
Q ss_pred HHHhccccEEEEcCCCCCCCEEee-cHHHHHHcCCChhhhcCCCCCccCCCCCCHH---------------H--HHHHHH
Q 001847 480 TLERIEKNFVITDPRLPDNPIIFA-SDSFLELTEYSREEILGRNCRFLQGPETDPA---------------T--VRKIRA 541 (1005)
Q Consensus 480 i~e~~~~~I~i~D~~G~d~~i~~v-N~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~---------------~--~~~i~~ 541 (1005)
++++++++|+++|.+|. ++++ |+++++++||+.++++|+++..+.+...... . ...+..
T Consensus 337 l~~~~~~~i~~~d~~g~---i~~~nn~~~~~~~G~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (807)
T PRK13560 337 IIEAAPIAAIGLDADGN---ICFVNNNAAERMLGWSAAEVMGKPLPGMDPELNEEFWCGDFQEWYPDGRPMAFDACPMAK 413 (807)
T ss_pred HHHhCcccEEEEcCCCC---EEEecCHHHHHHhCCCHHHHcCCCccccChhhhhhhhhchhhhcCCcCCcchhhhhhHHH
Confidence 99999999999999888 9987 6788889999999999998655433221111 0 011233
Q ss_pred HHhcCCcE-EEEEEEEecCCcEEEEEEEEeeeeCCCCCEEEEEEEEecCccCccc
Q 001847 542 AIDNQTDV-TVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEP 595 (1005)
Q Consensus 542 ~l~~~~~~-~~e~~~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerK~~ 595 (1005)
.+..+..+ ..++...+++|..+|+.....|++|.+|.+.+++++++|||++|+.
T Consensus 414 ~~~~~~~~~~~e~~~~~~~g~~~~~~~~~~p~~d~~g~~~~~~~~~~DITerk~~ 468 (807)
T PRK13560 414 TIKGGKIFDGQEVLIEREDDGPADCSAYAEPLHDADGNIIGAIALLVDITERKQV 468 (807)
T ss_pred HHhcCCcccCceEEEEcCCCCeEEEEEEEeeeECCCCCEEEEEEEeehhhhHHHH
Confidence 35555543 3578888999999999999999999999999999999999999995
No 409
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.91 E-value=4.6e-24 Score=214.16 Aligned_cols=274 Identities=20% Similarity=0.254 Sum_probs=221.2
Q ss_pred ccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCe
Q 001847 668 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTH 746 (1005)
Q Consensus 668 ~i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~ 746 (1005)
-+..+.|+++++||+|+||.+|++....+|..||||+=+... ...++..|..+.+.|. ...|+.+..++.+..+
T Consensus 11 ~iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a-----~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~y 85 (341)
T KOG1163|consen 11 LIVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA-----KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDY 85 (341)
T ss_pred heeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC-----CCcchhHHHHHHHHhccCCCCchhhhhcccccc
Confidence 456789999999999999999999999999999999765432 2335667899999995 4788999999999999
Q ss_pred EEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecC---CcEEEEeccCCcc
Q 001847 747 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN---GHVSLTDFDLSCL 823 (1005)
Q Consensus 747 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~---g~vkL~DFG~a~~ 823 (1005)
-.+||++. |.+|.+++.-.. ..++...+..++-|++.-++|+|.+++|||||||+|+|+.-+ ..+.|+|||+|+.
T Consensus 86 nvlVMdLL-GPsLEdLfnfC~-R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKk 163 (341)
T KOG1163|consen 86 NVLVMDLL-GPSLEDLFNFCS-RRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKK 163 (341)
T ss_pred ceeeeecc-CccHHHHHHHHh-hhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhh
Confidence 99999999 999999997542 458999999999999999999999999999999999999743 4689999999965
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001847 824 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 903 (1005)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~ 903 (1005)
..+.. ...+.+.+......||..|.+-..+.+...+.+.|+=|+|.+|.++..|.+||.+
T Consensus 164 y~d~~--------------------t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQg 223 (341)
T KOG1163|consen 164 YRDIR--------------------TRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQG 223 (341)
T ss_pred hcccc--------------------ccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccc
Confidence 43211 1124456677788999999999999888889999999999999999999999988
Q ss_pred C---ChHHHHHHHHhCCCCCCC---CCCCCHHHHHHHHHccccCcCccCCChhcHHHHH-------cCCCCCCCChhhh
Q 001847 904 K---TRQKTFANILHKDLKFPS---STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK-------KHPFFKGVNWALV 969 (1005)
Q Consensus 904 ~---~~~~~~~~i~~~~~~~~~---~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL-------~hpff~~~~~~~~ 969 (1005)
. +....+++|....+..+. ....+.++...+..|-..--++-|.... +.++. +|.+=--.+|..+
T Consensus 224 lka~tk~QKyEkI~EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~y-lrqlFriLfr~ln~~~d~iyDW~~l 301 (341)
T KOG1163|consen 224 LKAATKKQKYEKISEKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMY-LRQLFRILFRTLNHQYDYIYDWTML 301 (341)
T ss_pred cchhhHHHHHHHHHHhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHH-HHHHHHHHHhhccccCCeEeeHHHH
Confidence 4 445667777776665553 3457888999999998888888887543 34443 3333334678866
No 410
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.91 E-value=1.6e-23 Score=219.24 Aligned_cols=256 Identities=21% Similarity=0.274 Sum_probs=205.5
Q ss_pred ccccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeC
Q 001847 666 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTK 744 (1005)
Q Consensus 666 ~~~i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~ 744 (1005)
+..+..-.|++.++||+|+||.++.+.+.-++.+||||.=.. +...-++..|....+.| ..+.|+.++-+..++
T Consensus 22 ~~~~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPr-----kS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG 96 (449)
T KOG1165|consen 22 GVLMVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPR-----KSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEG 96 (449)
T ss_pred CceEecccceeccccccCcceeeecccccccCceEEEEeccc-----cCCcchHHHHHHHHHHHcCCCCCCceeeecccc
Confidence 344667799999999999999999999999999999996432 23345677788888888 679999999888888
Q ss_pred CeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecC-----CcEEEEecc
Q 001847 745 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-----GHVSLTDFD 819 (1005)
Q Consensus 745 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~-----g~vkL~DFG 819 (1005)
.+-.||+|+. |.+|.|++.-.. ..++...+..++.|++.-++|+|++++|.|||||+|+||..- ..+.++|||
T Consensus 97 ~~NiLVidLL-GPSLEDLFD~Cg-R~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFG 174 (449)
T KOG1165|consen 97 KYNILVIDLL-GPSLEDLFDLCG-RRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFG 174 (449)
T ss_pred chhhhhhhhh-CcCHHHHHHHhc-CcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEecc
Confidence 8999999999 999999998763 569999999999999999999999999999999999999743 358999999
Q ss_pred CCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCC
Q 001847 820 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYT 899 (1005)
Q Consensus 820 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~ 899 (1005)
+|+...+... -.+.|.+...++.||..||+-....+...+.+.|+=|||-++++++.|.+
T Consensus 175 mAK~YrDp~T--------------------kqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsL 234 (449)
T KOG1165|consen 175 MAKEYRDPKT--------------------KQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSL 234 (449)
T ss_pred chhhhcCccc--------------------cccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCC
Confidence 9976532211 13556788889999999999999999999999999999999999999999
Q ss_pred CCCC---CChHHHHHHHHhCCCCCCC---CCCCCHHHHHHHHHccccCcCccCCC
Q 001847 900 PFRG---KTRQKTFANILHKDLKFPS---STPTSLHAKQLMYRLLHRDPKSRLGS 948 (1005)
Q Consensus 900 Pf~~---~~~~~~~~~i~~~~~~~~~---~~~~s~~l~~Ll~~~L~~dP~~Rpt~ 948 (1005)
||.| .+..+.+++|-...-..+. ..+++.++...+...-..+-.+-|..
T Consensus 235 PWQGLKA~tnK~kYeKIGe~Kr~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDY 289 (449)
T KOG1165|consen 235 PWQGLKADTNKEKYEKIGETKRSTPIEVLCEGFPEEFATYLRYVRRLDFFETPDY 289 (449)
T ss_pred ccccccCcchHHHHHHhccccccCCHHHHHhcCHHHHHHHHHHHHhcCcccCCCH
Confidence 9987 4455666666433222221 13345566666665556666666664
No 411
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.90 E-value=7.7e-25 Score=248.64 Aligned_cols=262 Identities=41% Similarity=0.700 Sum_probs=220.1
Q ss_pred cccccCcEEEEEEEE---cCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCeEEEEEecc
Q 001847 679 PLGSGDTGSVHLVEL---CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCLITDYC 754 (1005)
Q Consensus 679 ~LG~G~~g~Vy~a~~---~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~lV~E~~ 754 (1005)
.+|.|+||.|++|.- ...+..|++|+.++......... ....|..++..++ ||++++++..|+.....+++++|.
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~-~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~ 79 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRT-HTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFL 79 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhccccccccccccc-ccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhc
Confidence 379999999998864 34477899999987655444333 4556778888886 999999999999999999999999
Q ss_pred CCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCc
Q 001847 755 PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPT 834 (1005)
Q Consensus 755 ~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~ 834 (1005)
.||.|+..+... ..+.+...+.+...++-+++++|+.+|+|+|+|++||+++.+|++++.|||+++....
T Consensus 80 rgg~lft~l~~~--~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~-------- 149 (612)
T KOG0603|consen 80 RGGDLFTRLSKE--VMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVK-------- 149 (612)
T ss_pred ccchhhhccccC--CchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHh--------
Confidence 999998887654 4478888999999999999999999999999999999999999999999999865321
Q ss_pred chhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHH
Q 001847 835 TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANIL 914 (1005)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~~i~ 914 (1005)
....|||..|||||++. .+...+|.||||+++++|++|..||.+ +....|+
T Consensus 150 -----------------------~~~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il 200 (612)
T KOG0603|consen 150 -----------------------EKIACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRIL 200 (612)
T ss_pred -----------------------hhhcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHh
Confidence 11228999999999988 567899999999999999999999987 6777777
Q ss_pred hCCCCCCCCCCCCHHHHHHHHHccccCcCccCCCh-hcHHHHHcCCCCCCCChhhhhhcCCCCCCCCCC
Q 001847 915 HKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMNPPELDAPLF 982 (1005)
Q Consensus 915 ~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~hpff~~~~~~~~~~~~~~~~~~p~~ 982 (1005)
+..+..|.. .+..+++++..++..+|.+|.-.. ..+.++++|+||..++|..+..+..+...-|..
T Consensus 201 ~~~~~~p~~--l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~~~l~~r~~~~~fkp~~ 267 (612)
T KOG0603|consen 201 KAELEMPRE--LSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSIDWNELEARSRPPPFKPGS 267 (612)
T ss_pred hhccCCchh--hhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheeeeHhhHhhcCCCCCCCCcc
Confidence 766555543 678899999999999999999865 578999999999999999887777775544443
No 412
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.89 E-value=1.6e-23 Score=214.58 Aligned_cols=161 Identities=24% Similarity=0.245 Sum_probs=128.2
Q ss_pred CchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 001847 757 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 836 (1005)
Q Consensus 757 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 836 (1005)
|+|.+++... +..+++..++.++.||+.||.|||+.+ ||+|||++.++.+|+ ||++.....
T Consensus 1 GsL~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~---------- 61 (176)
T smart00750 1 VSLADILEVR-GRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTP---------- 61 (176)
T ss_pred CcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeecc----------
Confidence 6899999754 345999999999999999999999998 999999999999999 998754321
Q ss_pred hhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH-HHHHHHHh
Q 001847 837 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ-KTFANILH 915 (1005)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~-~~~~~i~~ 915 (1005)
....|++.|+|||++.+..++.++|||||||++|+|++|+.||...... ..+..+..
T Consensus 62 ----------------------~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~ 119 (176)
T smart00750 62 ----------------------EQSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLN 119 (176)
T ss_pred ----------------------ccCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHH
Confidence 0125889999999999999999999999999999999999999765432 33333333
Q ss_pred CCCCCC-----CCCCCCH--HHHHHHHHccccCcCccCCChhcHHHHHcCCCCC
Q 001847 916 KDLKFP-----SSTPTSL--HAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 962 (1005)
Q Consensus 916 ~~~~~~-----~~~~~s~--~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~ 962 (1005)
...... .....+. .+.+||.+||..+|.+||+ +.++++|+|+.
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~----~~~ll~~~~~~ 169 (176)
T smart00750 120 GMPADDPRDRSNLESVSAARSFADFMRVCASRLPQRREA----ANHYLAHCRAL 169 (176)
T ss_pred HhccCCccccccHHHHHhhhhHHHHHHHHHhcccccccC----HHHHHHHHHHH
Confidence 222111 1111222 5899999999999999999 99999999876
No 413
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.88 E-value=9.2e-24 Score=252.55 Aligned_cols=261 Identities=24% Similarity=0.387 Sum_probs=200.4
Q ss_pred cccccccccCcEEEEEEEEcCCCeEEEEEEeec---ccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 675 RPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDK---GVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 675 ~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~---~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
.....+|.|++|.|+.+......+.++.|.++. ...........+..|..+-..+.|+|++..+..+.+....+-+|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 456789999999999888877666666665542 11122222333667888888899999988777776666566669
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 831 (1005)
|||++ +|+.++... ..++...+..+++||+.||.|||+.||.||||||+|++++.+|.+||+|||.+.......
T Consensus 401 E~~~~-Dlf~~~~~~--~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~--- 474 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMSN--GKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPW--- 474 (601)
T ss_pred hcccH-HHHHHHhcc--cccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCc---
Confidence 99988 999999774 358889999999999999999999999999999999999999999999999885432111
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCC-hhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001847 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTS-AVDWWALGILLYEMLYGYTPFRGKTRQKTF 910 (1005)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~-~sDIwSlGvll~eLltG~~Pf~~~~~~~~~ 910 (1005)
..........+|+..|+|||++.+..|.+ ..||||.|+++..|++|+.||.-....+..
T Consensus 475 --------------------e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~ 534 (601)
T KOG0590|consen 475 --------------------EKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNS 534 (601)
T ss_pred --------------------chhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccc
Confidence 11123455678999999999999998877 789999999999999999999765443322
Q ss_pred -HHHHh-CCC-----CCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCC
Q 001847 911 -ANILH-KDL-----KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 965 (1005)
Q Consensus 911 -~~i~~-~~~-----~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~ 965 (1005)
..... ... +......++...+.+|.+||+++|.+|.| +++|++.+||+.+.
T Consensus 535 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~t----i~~i~~d~W~~~i~ 592 (601)
T KOG0590|consen 535 FKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRIT----IEQILNDEWIRSIE 592 (601)
T ss_pred hhhhccccccccccChHHHHHhchhhHHHHHHHHccCChhheec----HHHHhhChHhhhcc
Confidence 11111 111 11111234567789999999999999999 99999999999864
No 414
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.88 E-value=2.7e-21 Score=217.85 Aligned_cols=254 Identities=22% Similarity=0.223 Sum_probs=194.4
Q ss_pred CccccccccccCcEEEEEEEEcCCC-eEEEEEEeecccccChHHHHHHHHHHHHHHhCC----CCCcceEEEEE-EeCCe
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSG-QYFAMKAMDKGVMLNRNKVHRACAEREILDMLD----HPFVPALYASF-QTKTH 746 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~-~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~----hpnIv~l~~~~-~~~~~ 746 (1005)
+|++.+.||+|+||.||+|.+..++ ..+|+|......... ...+..|..++..+. .++++.+++.+ ....+
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~---~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~ 95 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSK---PSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDF 95 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCC---CccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCce
Confidence 8999999999999999999997764 688999876542111 115666888888885 36999999999 47788
Q ss_pred EEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecC-----CcEEEEeccCC
Q 001847 747 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-----GHVSLTDFDLS 821 (1005)
Q Consensus 747 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~-----g~vkL~DFG~a 821 (1005)
.|+||+.+ |.+|.++......+.++...+..++.|++.+|.+||+.|++||||||+|+++... ..+.|+|||++
T Consensus 96 ~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla 174 (322)
T KOG1164|consen 96 NFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA 174 (322)
T ss_pred eEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence 99999999 9999999877666779999999999999999999999999999999999999865 36999999999
Q ss_pred c--ccCCCCCCCCCcchhhhhcccCCCCCccccccccc-ccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCC
Q 001847 822 C--LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRA-SNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGY 898 (1005)
Q Consensus 822 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~ 898 (1005)
+ ......... ..+.+. .....||..|+++.++.+...+.+.|+||++.++.+++.|.
T Consensus 175 r~~~~~~~~~~~--------------------~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~ 234 (322)
T KOG1164|consen 175 RRFKYVGDSGGN--------------------LRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGS 234 (322)
T ss_pred ccccccCCCCcc--------------------cccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCC
Confidence 7 221111000 001111 23456999999999999999999999999999999999999
Q ss_pred CCCCCCChHHHHHHHHhCC--CCCC-CCCCCCHHHHHHHHHccccCcCccCCChh
Q 001847 899 TPFRGKTRQKTFANILHKD--LKFP-SSTPTSLHAKQLMYRLLHRDPKSRLGSHE 950 (1005)
Q Consensus 899 ~Pf~~~~~~~~~~~i~~~~--~~~~-~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~ 950 (1005)
.||.+.........+.... .... .....+..+.+++..+-..+...+|....
T Consensus 235 LPW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~ 289 (322)
T KOG1164|consen 235 LPWEALEMTDLKSKFEKDPRKLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEK 289 (322)
T ss_pred CCCccccccchHHHHHHHhhhhccccccCCChHHHHHHHHHhhccCCcCCCCHHH
Confidence 9997755432222222211 1111 12234567778888888889999999543
No 415
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.88 E-value=8.7e-23 Score=241.66 Aligned_cols=242 Identities=39% Similarity=0.649 Sum_probs=186.9
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
.+|..++.|..|++|.||.++|+.+.+.+|+|+=+... +.+ .++....+|++|
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~kiNkq~l---------ilR--nilt~a~npfvv---------------- 135 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQNL---------ILR--NILTFAGNPFVV---------------- 135 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhhcccccch---------hhh--ccccccCCccee----------------
Confidence 47899999999999999999999999999996433221 111 044444555555
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC-
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL- 830 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~- 830 (1005)
|+-..+++.. +.++.+. +.+++|||+-||+|||+||+|++|+.-|++|+.|||++....-....
T Consensus 136 -----gDc~tllk~~--g~lPvdm--------vla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atn 200 (1205)
T KOG0606|consen 136 -----GDCATLLKNI--GPLPVDM--------VLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATN 200 (1205)
T ss_pred -----chhhhhcccC--CCCcchh--------hHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccch
Confidence 3334444432 3344333 77899999999999999999999999999999999998653211111
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001847 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 910 (1005)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~ 910 (1005)
.+....++..+ ......++|||.|+|||++....|+..+|-|++|+++|+++.|+.||.+++..+.+
T Consensus 201 l~eg~I~k~t~-------------Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelf 267 (1205)
T KOG0606|consen 201 LKEGHIEKDTH-------------EFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELF 267 (1205)
T ss_pred hhhcchHHHHH-------------HhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHH
Confidence 01111111000 11234579999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCCCC-CCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCChhhh
Q 001847 911 ANILHKDLKFPSS-TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 969 (1005)
Q Consensus 911 ~~i~~~~~~~~~~-~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~~~~~ 969 (1005)
..++...+.|++. ..+..+++++|.++|+.+|..|..-- .+-++.+|+||+.++|+-+
T Consensus 268 g~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt~-ga~evk~h~ff~~LDw~~l 326 (1205)
T KOG0606|consen 268 GQVISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRLGTG-GALEVKQHGFFQLLDWKSL 326 (1205)
T ss_pred hhhhhhhccccccCcCCCHHHHHHHHHHHHhChHhhcccc-hhhhhhhccceeecccchh
Confidence 9999998888876 44678999999999999999998744 6889999999999999944
No 416
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.87 E-value=1.3e-20 Score=209.89 Aligned_cols=262 Identities=36% Similarity=0.555 Sum_probs=205.9
Q ss_pred ccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCC-CcceEEEEEEeCCeEEEEEe
Q 001847 674 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHP-FVPALYASFQTKTHVCLITD 752 (1005)
Q Consensus 674 y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hp-nIv~l~~~~~~~~~~~lV~E 752 (1005)
|.+.+.||.|+|+.||++.+. ..+++|.+.............+.+|+.++..+.|+ +++.+++.+......+++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 78 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVME 78 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence 788899999999999999996 78899999876544444577888999999999988 79999999988777899999
Q ss_pred ccCCCchhhHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCC-cEEEEeccCCcccCCCCCC
Q 001847 753 YCPGGELFLLLDRQPT-KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-HVSLTDFDLSCLTSCKPQL 830 (1005)
Q Consensus 753 ~~~ggsL~~~l~~~~~-~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g-~vkL~DFG~a~~~~~~~~~ 830 (1005)
++.+++|.+++..... ..++......++.|++.++.|+|+.+++|||+||+||+++..+ .++++|||.+.........
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~ 158 (384)
T COG0515 79 YVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGST 158 (384)
T ss_pred cCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcc
Confidence 9999999977765421 2589999999999999999999999999999999999999988 7999999998633211110
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC---CCCCChhhHHHHHHHHHHHHcCCCCCCCCCh-
Q 001847 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG---AGHTSAVDWWALGILLYEMLYGYTPFRGKTR- 906 (1005)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~---~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~- 906 (1005)
.. .........|+..|++||.+.+ .......|+||+|++++++++|..||.....
T Consensus 159 ~~---------------------~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~ 217 (384)
T COG0515 159 SS---------------------IPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS 217 (384)
T ss_pred cc---------------------ccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc
Confidence 00 0012356689999999999987 5778899999999999999999999877653
Q ss_pred ---HHHHHHHHhCCCC-CCCCCCCC------HHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCC
Q 001847 907 ---QKTFANILHKDLK-FPSSTPTS------LHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 963 (1005)
Q Consensus 907 ---~~~~~~i~~~~~~-~~~~~~~s------~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~ 963 (1005)
......+...... ........ ..+.+++..|+..+|..|.+ ......++|...
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~----~~~~~~~~~~~~ 280 (384)
T COG0515 218 SATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLS----SSSDLSHDLLAH 280 (384)
T ss_pred ccHHHHHHHHHhcCCcccccccCccccchhhHHHHHHHHHHHhcCchhcCC----HHHHhhchHhhC
Confidence 3434444333322 22221111 46889999999999999999 666666655554
No 417
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.87 E-value=8.3e-22 Score=221.67 Aligned_cols=177 Identities=21% Similarity=0.185 Sum_probs=132.7
Q ss_pred cccccCCccccccccccCcEEEEEEEEcC-CCeEEEEEEeecccc--cChHHHHHHHHHHHHHHhCCCCCcce-EEEEEE
Q 001847 667 EQINLQHFRPIKPLGSGDTGSVHLVELCG-SGQYFAMKAMDKGVM--LNRNKVHRACAEREILDMLDHPFVPA-LYASFQ 742 (1005)
Q Consensus 667 ~~i~~~~y~~~~~LG~G~~g~Vy~a~~~~-~~~~valK~~~~~~~--~~~~~~~~~~~E~~il~~l~hpnIv~-l~~~~~ 742 (1005)
.+...++|.+.+.||+|+||+||+|.+.. ++..+|||.+..... ........+.+|+++|++++|+|++. ++++
T Consensus 13 ~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~-- 90 (365)
T PRK09188 13 IPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT-- 90 (365)
T ss_pred cccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc--
Confidence 34457899999999999999999999876 678889998753311 12334567889999999999999985 4432
Q ss_pred eCCeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCC-CCCcEEEecCCcEEEEeccCC
Q 001847 743 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDL-KPENVLLQGNGHVSLTDFDLS 821 (1005)
Q Consensus 743 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDL-kP~NILi~~~g~vkL~DFG~a 821 (1005)
+..|+||||++|++|... .. .. ...++.|++.+|.|||++||+|||| ||+|||++.++.+||+|||+|
T Consensus 91 --~~~~LVmE~~~G~~L~~~-~~-----~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA 159 (365)
T PRK09188 91 --GKDGLVRGWTEGVPLHLA-RP-----HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLA 159 (365)
T ss_pred --CCcEEEEEccCCCCHHHh-Cc-----cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccc
Confidence 457999999999999632 11 11 1467899999999999999999999 999999999999999999999
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC
Q 001847 822 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG 875 (1005)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~ 875 (1005)
.......... . ......-....+++.|+|||.+..
T Consensus 160 ~~~~~~~~~~----------------~---~~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 160 SVFRRRGALY----------------R---IAAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred eecccCcchh----------------h---hhhhhhhhhhhccCccCCcccCCh
Confidence 7653221100 0 000011135678999999999854
No 418
>PRK11359 cyclic-di-GMP phosphodiesterase; Provisional
Probab=99.85 E-value=4.2e-20 Score=234.54 Aligned_cols=241 Identities=20% Similarity=0.309 Sum_probs=197.7
Q ss_pred chHHHHHHHHHhcCCeEEEEeCCCCCCcEEEccHHHHHHcCCChhhhcCCCCCcCCCCCCChHHHHHHHHHHHcCC----
Q 001847 189 RVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ---- 264 (1005)
Q Consensus 189 ~~~~~l~~ile~~~~~i~i~D~~~~dg~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~---- 264 (1005)
.....+..+++.++++++++|. +|+|++||++|++++||+.+|++|+++..+.+++........+......+.
T Consensus 9 ~~~~~~~~~le~~~~~i~~~d~---~g~i~~~N~~~~~l~G~s~eeliG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (799)
T PRK11359 9 AADGIFFPALEQNMMGAVLINE---NDEVLFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVE 85 (799)
T ss_pred hhhhhHHHHHHhhcCcEEEEcC---CCeEEEEcHHHHHHhCCCHHHHcCCCHHHhcCccccccchHHHhhhhccCCcccc
Confidence 4455778899999999999998 778999999999999999999999998877777665444444444444432
Q ss_pred cEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhhcCCCCCchhhhhHHHHHHHHhhhhHHH
Q 001847 265 SYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTE 344 (1005)
Q Consensus 265 ~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~v~~~v~~~~DITerk~~E~~L~~~~~~l~~~l~~~~~~~~~~~~~~~~~ 344 (1005)
.+..+++.+++||..+|+.++..++. .+|. .+++++.+|||++++.+++++.
T Consensus 86 ~~~~e~~~~~~dG~~~~v~~~~~~~~-~~g~-~~~~~~~~DiT~~~~~~~~~~~-------------------------- 137 (799)
T PRK11359 86 GMSRELQLEKKDGSKIWTRFALSKVS-AEGK-VYYLALVRDASVEMAQKEQTRQ-------------------------- 137 (799)
T ss_pred ccceeeEEecCCcCEEEEEEEeeeec-cCCc-eEEEEEEeeccchhhhHHHHHH--------------------------
Confidence 24457888999999999999998874 4454 4678999999987766544331
Q ss_pred HHHHccCCCCcccCCCCCcccccCCCCchhhhcccccCCCCCCCCCCCCCCCCCCcccccccccccchhhccccCCcccc
Q 001847 345 LVQAMKKPRSLSESTNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGGCRTSMQRISEVPEKKKQKSGRRSFM 424 (1005)
Q Consensus 345 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (1005)
T Consensus 138 -------------------------------------------------------------------------------- 137 (799)
T PRK11359 138 -------------------------------------------------------------------------------- 137 (799)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccCCCCCCccccccccCCCCCCCCCCCCCchhhHHHHHHHhhcccHHHHHHhccccEEEEcCCCCCCCEEeec
Q 001847 425 GLIGRKSQSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFAS 504 (1005)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~er~~~e~~l~~~~~l~~i~e~~~~~I~i~D~~G~d~~i~~vN 504 (1005)
+..++++++++++++|.+|. ++++|
T Consensus 138 ----------------------------------------------------~~~~~~~~~~~i~~~d~~g~---i~~~N 162 (799)
T PRK11359 138 ----------------------------------------------------LIIAVDHLDRPVIVLDPERR---IVQCN 162 (799)
T ss_pred ----------------------------------------------------HHHHHhcCCCcEEEEcCCCc---EEEEC
Confidence 55678999999999999888 99999
Q ss_pred HHHHHHcCCChhhhcCCCCCccC-CCCCCHHHHHHHHHHHhcCCcEEEEEEEEecCCcEEEEEEEEeeeeCCCCCEEEEE
Q 001847 505 DSFLELTEYSREEILGRNCRFLQ-GPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFI 583 (1005)
Q Consensus 505 ~a~~~l~Gy~~eEllG~~~~~l~-~~~~~~~~~~~i~~~l~~~~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~v~~~v 583 (1005)
+++++++||+.++++|++...+. ++.........+...+..+..+..+++..+++|..+|+.++..|+.+.+|.+.+++
T Consensus 163 ~~~~~l~G~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~dG~~~~~~~~~~~v~d~~g~~~~~~ 242 (799)
T PRK11359 163 RAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLV 242 (799)
T ss_pred hhhHhhhCCCHHHHCCCChHHhcCCCCCcHHHHHHHHHhhccCCCCcceeEEeCCCCCEEEEEeeeeeeecCCCceeEEE
Confidence 99999999999999999876554 45555555666777777777788889999999999999999999999999999999
Q ss_pred EEEecCccCccc
Q 001847 584 GVQLDGSEHLEP 595 (1005)
Q Consensus 584 gi~~DITerK~~ 595 (1005)
++.+|||++|+.
T Consensus 243 ~~~~DITerk~~ 254 (799)
T PRK11359 243 MTFSDITEERQI 254 (799)
T ss_pred EEeehhhhHHHH
Confidence 999999999874
No 419
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.85 E-value=6e-22 Score=234.29 Aligned_cols=270 Identities=21% Similarity=0.273 Sum_probs=193.1
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeeccc-ccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-MLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~-~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
.|...+.||++-|=+|.++++. .| .+++|++-+.. .-.-....+...+++ ...+++||++.+.-+.......|||-
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~-eG-~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvR 100 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDR-EG-LVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVR 100 (1431)
T ss_pred ceeeecccCchhhhhhhhccCC-Cc-eEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHH
Confidence 6889999999999999999983 34 48999987653 223334455555666 56679999999988877888899999
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 831 (1005)
+|+ ..+|+|.+..++. +..-..+.|+.||+.||..+|..||+|||||.+||||++-+.+.|.||...+...-..+.
T Consensus 101 qyv-khnLyDRlSTRPF--L~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDN- 176 (1431)
T KOG1240|consen 101 QYV-KHNLYDRLSTRPF--LVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDN- 176 (1431)
T ss_pred HHH-hhhhhhhhccchH--HHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCCCC-
Confidence 999 7899999987654 888889999999999999999999999999999999999999999999976443211110
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC----------C-CCChhhHHHHHHHHHHHHc-CCC
Q 001847 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA----------G-HTSAVDWWALGILLYEMLY-GYT 899 (1005)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~----------~-~~~~sDIwSlGvll~eLlt-G~~ 899 (1005)
|. .. .++. ++-.-..+|+|||.+... . .+++.||||+||++.||++ |++
T Consensus 177 -Pa-----------df-~fFF------DTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~P 237 (1431)
T KOG1240|consen 177 -PA-----------DF-TFFF------DTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRP 237 (1431)
T ss_pred -cc-----------cc-eEEE------ecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCC
Confidence 00 00 0111 111234589999988542 1 4678999999999999997 888
Q ss_pred CCCCCChHHHHHHHHhCCCCCC---CCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcC-------CCCCCCChhhh
Q 001847 900 PFRGKTRQKTFANILHKDLKFP---SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH-------PFFKGVNWALV 969 (1005)
Q Consensus 900 Pf~~~~~~~~~~~i~~~~~~~~---~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~h-------pff~~~~~~~~ 969 (1005)
||.-. ++.....+.-..+ .....+..+++||..|++.||.+|.+ |++.|+- .||-.+-+.-+
T Consensus 238 lF~LS----QL~aYr~~~~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlS----AedyL~~yrG~~FP~yFy~FL~~Y~ 309 (1431)
T KOG1240|consen 238 LFTLS----QLLAYRSGNADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLS----AEDYLQKYRGLVFPEYFYSFLYDYL 309 (1431)
T ss_pred cccHH----HHHhHhccCccCHHHHHHhCcCccHHHHHHHHHccCchhccC----HHHHHHhhhccccHHHHHHHHHHHH
Confidence 88311 0111111100000 00112335789999999999999999 8888876 34444444555
Q ss_pred hhcCCCC
Q 001847 970 RCMNPPE 976 (1005)
Q Consensus 970 ~~~~~~~ 976 (1005)
.++.++.
T Consensus 310 ~~~~~~~ 316 (1431)
T KOG1240|consen 310 DRFVPLT 316 (1431)
T ss_pred HhcCCcc
Confidence 6666665
No 420
>TIGR02938 nifL_nitrog nitrogen fixation negative regulator NifL. NifL is a modulator of the nitrogen fixation positive regulator protein NifA, and is therefore a negative regulator. It binds NifA. NifA and NifL are encoded by adjacent genes.
Probab=99.84 E-value=3.8e-21 Score=229.44 Aligned_cols=244 Identities=20% Similarity=0.299 Sum_probs=191.5
Q ss_pred HHHHHHHHHhcCCeEEEEeCCCCCCcEEEccHHHHHHcCCChhhhcCCCCCcCCCCCCChHHHHHHHHHHHcCCcEEEEE
Q 001847 191 SDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRL 270 (1005)
Q Consensus 191 ~~~l~~ile~~~~~i~i~D~~~~dg~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~ 270 (1005)
.+.|+.++++++++++++|. +|+++++|++|++++||++++++|++...+.++.........+.+.+..+..+..++
T Consensus 3 ~~~~~~i~~~~~~~i~~~d~---~g~~~~~N~~~~~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (494)
T TIGR02938 3 PEAYRQTVDQAPLAISITDL---KANILYANDAFTRITGYTKEEIIGKNESVLSNHTTPPEVYQALWGSLAEQKPWAGKL 79 (494)
T ss_pred hHHHHHHHHhCCceEEEECC---CCcEEEEchhheeecCCCHHHHhCCCchhhcCCCCCHHHHHHHHHHHHhCCccccee
Confidence 46799999999999999998 777999999999999999999999987766666666666777788888888888888
Q ss_pred EEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhhcCCCCCchhhhhHHHHHHHHhhhhHHHHHHHcc
Q 001847 271 LNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTELVQAMK 350 (1005)
Q Consensus 271 ~~~~kdG~~~wv~~~~~pi~d~~G~v~~~v~~~~DITerk~~E~~L~~~~~~l~~~l~~~~~~~~~~~~~~~~~l~~~~~ 350 (1005)
..++++|..+|+...+.|+++.+|.+.+++++++|||++|+++++++..
T Consensus 80 ~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~DIt~~k~~e~~l~~~------------------------------- 128 (494)
T TIGR02938 80 LNRRKDGELYLAELTVAPVLNEAGETTHFLGMHRDITELHRLEQVVANQ------------------------------- 128 (494)
T ss_pred eccCCCccchhhheeeEEEECCCCCEEEEEEehhhhhHHHHHHHHHHHH-------------------------------
Confidence 8889999999999999999999999999999999999999998776520
Q ss_pred CCCCcccCCCCCcccccCCCCchhhhcccccCCCCCCCCCCCCCCCCCCcccccccccccchhhccccCCcccccccccc
Q 001847 351 KPRSLSESTNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGGCRTSMQRISEVPEKKKQKSGRRSFMGLIGRK 430 (1005)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (1005)
T Consensus 129 -------------------------------------------------------------------------------- 128 (494)
T TIGR02938 129 -------------------------------------------------------------------------------- 128 (494)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCCCCCccccccccCCCCCCCCCCCCCchhhHHHHHHHhhcccHHHHHHhccccEEEEcCCCCCCCEEeecHHHHHH
Q 001847 431 SQSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLEL 510 (1005)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~er~~~e~~l~~~~~l~~i~e~~~~~I~i~D~~G~d~~i~~vN~a~~~l 510 (1005)
...++.++++++++|+++|.+|. ++++|++|+++
T Consensus 129 -------------------------------------------~~~~~~~~~~~~~~i~~~d~~~~---i~~~N~~~~~~ 162 (494)
T TIGR02938 129 -------------------------------------------KLLIESVVDAAPVAFVLLDPTGR---VILDNQEYKKL 162 (494)
T ss_pred -------------------------------------------HHHHHHHHhcccceEEEEcCCCC---EEEechhHHHh
Confidence 01178899999999999999888 99999999999
Q ss_pred cCCChhhhcCCCCCccCCCCCCHHHHHHHHHHHhcCCcE-EEEEEEEecCCc-EEEEEEEEeeeeCCCCCE---------
Q 001847 511 TEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDV-TVQLINYTKSGK-KFWNLFHLQPMRDQKGEV--------- 579 (1005)
Q Consensus 511 ~Gy~~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~-~~e~~~~~kdG~-~~wv~~~~~pi~d~~G~v--------- 579 (1005)
+|+...+..+..+..+.+++.... +......+..+ ..+......+|. .+|+.....++.+..|.+
T Consensus 163 ~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (494)
T TIGR02938 163 ATDLRVKEPAHTVLDLLREAWREA----LAENWPQQLAFSNREARFDRGGGRPARWLSCTGSVIGMESDCADSFFCAAEQ 238 (494)
T ss_pred hchhhhhHHHHHHHHHhhHHhhhh----hhhcchhhhccccceeeeccCCCceeeEEEecCceEEeecchhhheeccCCC
Confidence 999988887765444444332222 11111111121 223444455555 789999888887766553
Q ss_pred EEEEEEEecCccCcccccc
Q 001847 580 QYFIGVQLDGSEHLEPLRN 598 (1005)
Q Consensus 580 ~~~vgi~~DITerK~~e~~ 598 (1005)
.+++++++|||++|+++++
T Consensus 239 ~~~~~~~~DITe~k~~ee~ 257 (494)
T TIGR02938 239 PYLLLTIADISNLREEQER 257 (494)
T ss_pred chheehHHHHHHHHHHHHH
Confidence 3456788999999996544
No 421
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.82 E-value=2.7e-20 Score=195.04 Aligned_cols=176 Identities=16% Similarity=0.144 Sum_probs=135.8
Q ss_pred ccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHH------HHHHHHHHHhCCCCCcceEEEEE
Q 001847 668 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHR------ACAEREILDMLDHPFVPALYASF 741 (1005)
Q Consensus 668 ~i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~------~~~E~~il~~l~hpnIv~l~~~~ 741 (1005)
.+..++|++++.||.|+||.||++.+ ++..+|+|++............. +.+|+..+.++.|++|..+.+++
T Consensus 27 ~~l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~ 104 (232)
T PRK10359 27 DFLSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFY 104 (232)
T ss_pred HHhhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEee
Confidence 34568999999999999999999766 46689999998764444443333 56889999999999999999886
Q ss_pred EeC--------CeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcE
Q 001847 742 QTK--------THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHV 813 (1005)
Q Consensus 742 ~~~--------~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~v 813 (1005)
... +..++||||++|.+|.++.. +++ ..+.+++.+|..||..|++|||+||+||+++.+| +
T Consensus 105 ~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i 173 (232)
T PRK10359 105 LLAERKTLRYAHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-L 173 (232)
T ss_pred eecccccccccCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-E
Confidence 633 35789999999999988732 333 2456999999999999999999999999999988 9
Q ss_pred EEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHH
Q 001847 814 SLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYE 893 (1005)
Q Consensus 814 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~e 893 (1005)
+|+|||.......+.. . .-++....++.++||||||+++..
T Consensus 174 ~liDfg~~~~~~e~~a---------------------------------~------d~~vler~y~~~~di~~lg~~~~~ 214 (232)
T PRK10359 174 RIIDLSGKRCTAQRKA---------------------------------K------DRIDLERHYGIKNEIKDLGYYLLI 214 (232)
T ss_pred EEEECCCcccccchhh---------------------------------H------HHHHHHhHhcccccccceeEeehH
Confidence 9999998743311100 0 002334445678999999999877
Q ss_pred HH
Q 001847 894 ML 895 (1005)
Q Consensus 894 Ll 895 (1005)
+.
T Consensus 215 ~~ 216 (232)
T PRK10359 215 YK 216 (232)
T ss_pred HH
Confidence 64
No 422
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.82 E-value=3.5e-20 Score=199.79 Aligned_cols=236 Identities=23% Similarity=0.281 Sum_probs=152.8
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC----------CCCcceEEEEEE
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD----------HPFVPALYASFQ 742 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~----------hpnIv~l~~~~~ 742 (1005)
.+.....||.|+++.||.|.|..||+.+|+|++...........+.+.+|.-....+. |-.++..++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 4677789999999999999999999999999987665444555666666654443322 223444444332
Q ss_pred e---------C---C-----eEEEEEeccCCCchhhHHhh---CCC--CCCCHHHHHHHHHHHHHHHHHHHHcCcccCCC
Q 001847 743 T---------K---T-----HVCLITDYCPGGELFLLLDR---QPT--KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDL 800 (1005)
Q Consensus 743 ~---------~---~-----~~~lV~E~~~ggsL~~~l~~---~~~--~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDL 800 (1005)
. . . ..+++|+-+ .++|.+++.. ... ..+.......+..|+++.+++||..|++|+||
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi 171 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDI 171 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-
T ss_pred EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEeccc
Confidence 1 1 1 246788888 7888877652 111 11223333455589999999999999999999
Q ss_pred CCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-----
Q 001847 801 KPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG----- 875 (1005)
Q Consensus 801 kP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~----- 875 (1005)
+|+|++++.+|.++|+||+.....+... .....+..|.+||....
T Consensus 172 ~~~nfll~~~G~v~Lg~F~~~~r~g~~~------------------------------~~~~~~~~~~PPe~~~~~~~~~ 221 (288)
T PF14531_consen 172 KPENFLLDQDGGVFLGDFSSLVRAGTRY------------------------------RCSEFPVAFTPPELESCAGQFG 221 (288)
T ss_dssp SGGGEEE-TTS-EEE--GGGEEETTEEE------------------------------EGGGS-TTTS-HHHHHHHTSCH
T ss_pred ceeeEEEcCCCCEEEcChHHHeecCcee------------------------------eccCCCcccCChhhhhhhcccC
Confidence 9999999999999999999764322100 00124467899997643
Q ss_pred ---CCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCcc
Q 001847 876 ---AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSR 945 (1005)
Q Consensus 876 ---~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~R 945 (1005)
..++.+.|.|+||+++|.|.||..||........... .+......+..++.||..||+++|.+|
T Consensus 222 ~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~------~f~~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 222 QNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEW------DFSRCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGG------GGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred cccceeeeccCHHHHHHHHHHHHHccCCCCCCCccccccc------cchhcCCcCHHHHHHHHHHccCCcccC
Confidence 2467799999999999999999999976543221110 333334678889999999999999988
No 423
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.81 E-value=1.6e-19 Score=187.03 Aligned_cols=141 Identities=16% Similarity=0.173 Sum_probs=109.6
Q ss_pred cccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHH-----------------------HHHHHHHHHHHHhCCCCC
Q 001847 677 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK-----------------------VHRACAEREILDMLDHPF 733 (1005)
Q Consensus 677 ~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~-----------------------~~~~~~E~~il~~l~hpn 733 (1005)
...||+|++|.||+|.+. +|+.||+|+++......... ......|+.++..+.+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 467999999999999996 89999999998653211110 112235899999998877
Q ss_pred cceEEEEEEeCCeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHH-HHcCcccCCCCCCcEEEecCCc
Q 001847 734 VPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYL-HCQGIIYRDLKPENVLLQGNGH 812 (1005)
Q Consensus 734 Iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~L-H~~gIvHrDLkP~NILi~~~g~ 812 (1005)
+.....+... . .+|||||++|+++...+... ..++...+..++.||+.+|.+| |+.||+||||||+|||++ ++.
T Consensus 81 v~~p~~~~~~-~-~~iVmE~i~g~~l~~~~~~~--~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~ 155 (190)
T cd05147 81 IPCPEPILLK-S-HVLVMEFIGDDGWAAPRLKD--APLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGK 155 (190)
T ss_pred CCCCcEEEec-C-CEEEEEEeCCCCCcchhhhc--CCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCc
Confidence 7544433222 2 38999999887776553332 4588999999999999999999 799999999999999998 588
Q ss_pred EEEEeccCCcc
Q 001847 813 VSLTDFDLSCL 823 (1005)
Q Consensus 813 vkL~DFG~a~~ 823 (1005)
++|+|||+|..
T Consensus 156 v~LiDFG~a~~ 166 (190)
T cd05147 156 LYIIDVSQSVE 166 (190)
T ss_pred EEEEEcccccc
Confidence 99999999854
No 424
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.78 E-value=2.3e-19 Score=182.94 Aligned_cols=244 Identities=19% Similarity=0.301 Sum_probs=199.7
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 001847 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 748 (1005)
Q Consensus 669 i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 748 (1005)
+...+..++.+|.+.-.|..|++++ .|.-++.|++..... ......+|..|.-.|+...||||+.+++.+.....+.
T Consensus 187 id~~~lnl~tkl~e~hsgelwrgrw--qgndivakil~vr~~-t~risrdfneefp~lrifshpnilpvlgacnsppnlv 263 (448)
T KOG0195|consen 187 IDVSSLNLITKLAESHSGELWRGRW--QGNDIVAKILNVREV-TARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLV 263 (448)
T ss_pred cchhhhhhhhhhccCCCcccccccc--cCcchhhhhhhhhhc-chhhcchhhhhCcceeeecCCchhhhhhhccCCCCce
Confidence 4455677788899999999999999 445677787764432 2333456777888888899999999999999999999
Q ss_pred EEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC--cccCCCCCCcEEEecCCcEEEE--eccCCccc
Q 001847 749 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQGNGHVSLT--DFDLSCLT 824 (1005)
Q Consensus 749 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~g--IvHrDLkP~NILi~~~g~vkL~--DFG~a~~~ 824 (1005)
++..||+-|+|+.++..+..-..+..++..++.++++|++|||+.. |..--|....++|+++-+.+|+ |--++...
T Consensus 264 ~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsfqe 343 (448)
T KOG0195|consen 264 IISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQE 343 (448)
T ss_pred EeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeeeec
Confidence 9999999999999999887777888999999999999999999984 4445788889999998776663 43333111
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCC---ChhhHHHHHHHHHHHHcCCCCC
Q 001847 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHT---SAVDWWALGILLYEMLYGYTPF 901 (1005)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~---~~sDIwSlGvll~eLltG~~Pf 901 (1005)
......|.||+||.+...+-+ .++|+|||++++|||.|...||
T Consensus 344 ----------------------------------~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpf 389 (448)
T KOG0195|consen 344 ----------------------------------VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPF 389 (448)
T ss_pred ----------------------------------cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhcccccc
Confidence 123457899999999876543 3899999999999999999999
Q ss_pred CCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCCh
Q 001847 902 RGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH 949 (1005)
Q Consensus 902 ~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~ 949 (1005)
..-.+.+.-.+|.-..+....++.++...-+|+.-|+..||.+||.+.
T Consensus 390 adlspmecgmkialeglrv~ippgis~hm~klm~icmnedpgkrpkfd 437 (448)
T KOG0195|consen 390 ADLSPMECGMKIALEGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFD 437 (448)
T ss_pred ccCCchhhhhhhhhccccccCCCCccHHHHHHHHHHhcCCCCcCCCcc
Confidence 999998888888777777777778899999999999999999999964
No 425
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.78 E-value=2.6e-18 Score=178.42 Aligned_cols=143 Identities=17% Similarity=0.138 Sum_probs=111.7
Q ss_pred cccccccCcEEEEEEEEcCCCeEEEEEEeecccccCh-----------------------HHHHHHHHHHHHHHhCCCCC
Q 001847 677 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR-----------------------NKVHRACAEREILDMLDHPF 733 (1005)
Q Consensus 677 ~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~-----------------------~~~~~~~~E~~il~~l~hpn 733 (1005)
.+.||+|++|.||+|.+. +|+.||||+++....... ........|...+.++.|++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG 80 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 578999999999999986 899999999986521100 00122357889999999998
Q ss_pred cceEEEEEEeCCeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCcccCCCCCCcEEEecCCc
Q 001847 734 VPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGH 812 (1005)
Q Consensus 734 Iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~-~gIvHrDLkP~NILi~~~g~ 812 (1005)
+.....+.... .|+||||++|+++....... ..++...+..++.|++.+|.+||+ .||+||||||+|||++ ++.
T Consensus 81 i~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~--~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~~ 155 (190)
T cd05145 81 VPVPEPILLKK--NVLVMEFIGDDGSPAPRLKD--VPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DGK 155 (190)
T ss_pred CCCceEEEecC--CEEEEEEecCCCchhhhhhh--ccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CCC
Confidence 86554443332 48999999887554332222 347888999999999999999999 9999999999999999 899
Q ss_pred EEEEeccCCcccC
Q 001847 813 VSLTDFDLSCLTS 825 (1005)
Q Consensus 813 vkL~DFG~a~~~~ 825 (1005)
++|+|||++....
T Consensus 156 ~~liDFG~a~~~~ 168 (190)
T cd05145 156 PYIIDVSQAVELD 168 (190)
T ss_pred EEEEEcccceecC
Confidence 9999999986543
No 426
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.78 E-value=8.1e-19 Score=187.74 Aligned_cols=205 Identities=23% Similarity=0.343 Sum_probs=145.8
Q ss_pred CCCCcceEEEEEEe---------------------------CCeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHH
Q 001847 730 DHPFVPALYASFQT---------------------------KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAE 782 (1005)
Q Consensus 730 ~hpnIv~l~~~~~~---------------------------~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~q 782 (1005)
+|||||.++.+|.+ +..+|+||..+ ..+|..|+..+. .+....+.++.|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY-~~tLr~yl~~~~---~s~r~~~~~laQ 349 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRY-RQTLREYLWTRH---RSYRTGRVILAQ 349 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcc-hhhHHHHHhcCC---CchHHHHHHHHH
Confidence 59999999988743 23589999999 889999998753 677888889999
Q ss_pred HHHHHHHHHHcCcccCCCCCCcEEEe--cCC--cEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccc
Q 001847 783 VVVALEYLHCQGIIYRDLKPENVLLQ--GNG--HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRAS 858 (1005)
Q Consensus 783 il~aL~~LH~~gIvHrDLkP~NILi~--~~g--~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 858 (1005)
+++|+.|||++||.|||+|.+|||+. +|+ .+.|.|||++-.. +.+. .+-+. ....
T Consensus 350 lLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd--~~hG--------------lqlpy-----~S~~ 408 (598)
T KOG4158|consen 350 LLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLAD--DNHG--------------LQLPY-----ESDE 408 (598)
T ss_pred HHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeec--cccc--------------ccccc-----cccc
Confidence 99999999999999999999999995 333 5889999976321 1111 00000 0011
Q ss_pred cccccCCcccccccccCCCC------CChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCCCC-CCCCCCHHHH
Q 001847 859 NSFVGTEEYIAPEIIAGAGH------TSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFP-SSTPTSLHAK 931 (1005)
Q Consensus 859 ~~~~gt~~y~aPE~l~~~~~------~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~~i~~~~~~~~-~~~~~s~~l~ 931 (1005)
-..-|...-||||+....+- ..++|.|+.|.+.||++....||.+......-..-.+. -.+| .+..+++.++
T Consensus 409 Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe-~qLPalp~~vpp~~r 487 (598)
T KOG4158|consen 409 VDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQE-SQLPALPSRVPPVAR 487 (598)
T ss_pred ccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhh-hhCCCCcccCChHHH
Confidence 12357778999999865431 23899999999999999999999873332211111111 1222 2334788899
Q ss_pred HHHHHccccCcCccCCChhcHHHHHcCCCC
Q 001847 932 QLMYRLLHRDPKSRLGSHEGANEIKKHPFF 961 (1005)
Q Consensus 932 ~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff 961 (1005)
+|+..+|+.||.+|++.. ++..+|+-..+
T Consensus 488 qlV~~lL~r~pskRvsp~-iAANvl~LsLw 516 (598)
T KOG4158|consen 488 QLVFDLLKRDPSKRVSPN-IAANVLNLSLW 516 (598)
T ss_pred HHHHHHhcCCccccCCcc-HHHhHHHHHHh
Confidence 999999999999999954 45555544333
No 427
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.75 E-value=2.1e-17 Score=169.57 Aligned_cols=203 Identities=19% Similarity=0.178 Sum_probs=139.8
Q ss_pred ccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccC-hHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCeEEEEE
Q 001847 674 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN-RNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 674 y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~-~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
+-+...|++|+||+||.+.. .+.+++.+.+....... .-....+.+|+++|++|. +++|++++++ +..|++|
T Consensus 4 ~~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvm 77 (218)
T PRK12274 4 PAVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDR 77 (218)
T ss_pred cccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEE
Confidence 34567899999999997776 67788877665432111 111225678999999995 5889999886 4469999
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCC-CCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDL-KPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDL-kP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 830 (1005)
||+.|.+|...... . ...++.|++.+|.++|++||+|||| ||+|||++.+|.++|+|||++.........
T Consensus 78 eyI~G~~L~~~~~~--------~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~ 148 (218)
T PRK12274 78 SYLAGAAMYQRPPR--------G-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARW 148 (218)
T ss_pred eeecCccHHhhhhh--------h-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchH
Confidence 99999998654321 1 1357889999999999999999999 799999999999999999999643311100
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCC-ChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001847 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHT-SAVDWWALGILLYEMLYGYTPFRGKT 905 (1005)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~-~~sDIwSlGvll~eLltG~~Pf~~~~ 905 (1005)
. ..-. .+.. ... ...-...++.|++|+.-... ..+ ...+-++.|+-+|.++|+..|+.++.
T Consensus 149 ~--r~L~-~rDl----------~~l-lk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~ 211 (218)
T PRK12274 149 M--RLLA-REDL----------RHL-LKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN 211 (218)
T ss_pred H--HHHH-HHHH----------HHH-HHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence 0 0000 0000 000 00012357778888753221 222 46788899999999999999886654
No 428
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.74 E-value=4.2e-18 Score=207.19 Aligned_cols=197 Identities=25% Similarity=0.360 Sum_probs=159.0
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC---CCCcceEEEEEEeCC
Q 001847 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD---HPFVPALYASFQTKT 745 (1005)
Q Consensus 669 i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~---hpnIv~l~~~~~~~~ 745 (1005)
+....|.|-+.||+|+||+||+|.+.. |+.+|||+=+.... -.++--.+++.+|+ -+.|..+..++...+
T Consensus 695 ~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~------WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~ 767 (974)
T KOG1166|consen 695 VGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNP------WEFYICLQVMERLKPQMLPSIMHISSAHVFQN 767 (974)
T ss_pred ecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCc------eeeeehHHHHHhhchhhhcchHHHHHHHccCC
Confidence 456789999999999999999999966 99999998765432 23333344555555 234455555556667
Q ss_pred eEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEec-------CCcEEEEec
Q 001847 746 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-------NGHVSLTDF 818 (1005)
Q Consensus 746 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~-------~g~vkL~DF 818 (1005)
.-++|+||.+.|+|.+++.. .+.+++..+..+..|++..|+.||..+||||||||+|+|+.. +-.++|+||
T Consensus 768 ~S~lv~ey~~~Gtlld~~N~--~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDf 845 (974)
T KOG1166|consen 768 ASVLVSEYSPYGTLLDLINT--NKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDF 845 (974)
T ss_pred cceeeeeccccccHHHhhcc--CCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEec
Confidence 77899999999999999984 466999999999999999999999999999999999999952 335999999
Q ss_pred cCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCC
Q 001847 819 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGY 898 (1005)
Q Consensus 819 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~ 898 (1005)
|.+.-+..-+ +.......++|-.|-++|...+.++++..|.|.|+.+++-|++|+
T Consensus 846 G~siDm~lfp-------------------------~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~ 900 (974)
T KOG1166|consen 846 GRSIDMKLFP-------------------------DGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGK 900 (974)
T ss_pred ccceeeeEcC-------------------------CCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHH
Confidence 9986543111 112345678999999999999999999999999999999999986
Q ss_pred C
Q 001847 899 T 899 (1005)
Q Consensus 899 ~ 899 (1005)
+
T Consensus 901 y 901 (974)
T KOG1166|consen 901 Y 901 (974)
T ss_pred H
Confidence 3
No 429
>PRK10345 hypothetical protein; Provisional
Probab=99.73 E-value=4.1e-17 Score=170.72 Aligned_cols=136 Identities=22% Similarity=0.215 Sum_probs=107.2
Q ss_pred cccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-----CCCCcceEEEEEEeCC---e
Q 001847 675 RPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-----DHPFVPALYASFQTKT---H 746 (1005)
Q Consensus 675 ~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l-----~hpnIv~l~~~~~~~~---~ 746 (1005)
.-...||+|+|+.||. ++.++.. +||++.... ......+.+|+.+++.+ +||||+++++++.++. .
T Consensus 5 ~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~---~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~ 78 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRG---DGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGY 78 (210)
T ss_pred CCcceecCCCceEEEE--CCCCcCe-EEEEEeccc---cchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeE
Confidence 3456799999999995 7667666 699886532 22346788999999999 5799999999998863 4
Q ss_pred EE-EEEec--cCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHH-HHHHHcCcccCCCCCCcEEEecC----CcEEEEec
Q 001847 747 VC-LITDY--CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVAL-EYLHCQGIIYRDLKPENVLLQGN----GHVSLTDF 818 (1005)
Q Consensus 747 ~~-lV~E~--~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL-~~LH~~gIvHrDLkP~NILi~~~----g~vkL~DF 818 (1005)
++ +|||| +.+++|.+++... .+++. ..++.|++.++ +|||+++|+||||||+|||++.. +.++|+||
T Consensus 79 v~~~I~e~~G~~~~tL~~~l~~~---~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg 153 (210)
T PRK10345 79 VYDVIADFDGKPSITLTEFAEQC---RYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDN 153 (210)
T ss_pred EEEEEecCCCCcchhHHHHHHcc---cccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEEC
Confidence 44 78999 4479999999653 25555 35678888887 99999999999999999999743 47999995
Q ss_pred cCC
Q 001847 819 DLS 821 (1005)
Q Consensus 819 G~a 821 (1005)
+-+
T Consensus 154 ~G~ 156 (210)
T PRK10345 154 IGE 156 (210)
T ss_pred CCC
Confidence 433
No 430
>smart00090 RIO RIO-like kinase.
Probab=99.69 E-value=1.3e-16 Score=171.02 Aligned_cols=145 Identities=20% Similarity=0.139 Sum_probs=113.7
Q ss_pred CccccccccccCcEEEEEEE-EcCCCeEEEEEEeecccccC-------------------hH--HHHHHHHHHHHHHhCC
Q 001847 673 HFRPIKPLGSGDTGSVHLVE-LCGSGQYFAMKAMDKGVMLN-------------------RN--KVHRACAEREILDMLD 730 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~-~~~~~~~valK~~~~~~~~~-------------------~~--~~~~~~~E~~il~~l~ 730 (1005)
.|.+.+.||.|++|.||+|. +..+|+.||+|+++...... .. ....+..|+.++.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 58899999999999999999 66789999999997542110 00 1123567999999997
Q ss_pred C--CCcceEEEEEEeCCeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-cccCCCCCCcEEE
Q 001847 731 H--PFVPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG-IIYRDLKPENVLL 807 (1005)
Q Consensus 731 h--pnIv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~g-IvHrDLkP~NILi 807 (1005)
+ ..+++++++ ...++||||++|++|....... ..+....+..++.||+.+|.+||+.| |+|+||||+||++
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli 182 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD--VEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILV 182 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCccccccccc--CCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEE
Confidence 5 334555543 2348999999988887654332 33666677899999999999999999 9999999999999
Q ss_pred ecCCcEEEEeccCCccc
Q 001847 808 QGNGHVSLTDFDLSCLT 824 (1005)
Q Consensus 808 ~~~g~vkL~DFG~a~~~ 824 (1005)
+ ++.++|+|||.+...
T Consensus 183 ~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 183 H-DGKVVIIDVSQSVEL 198 (237)
T ss_pred E-CCCEEEEEChhhhcc
Confidence 9 889999999998543
No 431
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.66 E-value=3.9e-17 Score=183.00 Aligned_cols=185 Identities=26% Similarity=0.374 Sum_probs=137.8
Q ss_pred CeEEEEEeccCCCchhhHHhh-CCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcc
Q 001847 745 THVCLITDYCPGGELFLLLDR-QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 823 (1005)
Q Consensus 745 ~~~~lV~E~~~ggsL~~~l~~-~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~ 823 (1005)
.++||.|++|.-.+|.+.+.+ ......+......++.|++.++.| +|.+|+|+||.||++..+..+||+|||+...
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts 405 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTS 405 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheee
Confidence 368999999999999999974 344457778899999999999999 9999999999999999999999999999865
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001847 824 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 903 (1005)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~ 903 (1005)
+...... ..........+||..||+||.+.+..|+.++||||||++|+||+. +|..
T Consensus 406 ~~~~~~~---------------------~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~---~f~T 461 (516)
T KOG1033|consen 406 QDKDETV---------------------APAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI---QFST 461 (516)
T ss_pred cccCCcc---------------------cchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH---Hhcc
Confidence 4433211 111223455689999999999999999999999999999999996 2222
Q ss_pred CC-hHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCC
Q 001847 904 KT-RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 961 (1005)
Q Consensus 904 ~~-~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff 961 (1005)
.. ....+..+-.+.++......++ .-..|+.+||...|.+||+ +.+.--|+|.
T Consensus 462 ~~er~~t~~d~r~g~ip~~~~~d~p-~e~~ll~~lls~~p~~RP~----~~~~~~~~~~ 515 (516)
T KOG1033|consen 462 QFERIATLTDIRDGIIPPEFLQDYP-EEYTLLQQLLSPSPEERPS----AIEVALHEFL 515 (516)
T ss_pred HHHHHHhhhhhhcCCCChHHhhcCc-HHHHHHHHhcCCCcccCch----HHHHhhhhhc
Confidence 11 1222233333333311222222 3468999999999999997 5555556554
No 432
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.65 E-value=1.2e-15 Score=161.19 Aligned_cols=138 Identities=21% Similarity=0.237 Sum_probs=114.9
Q ss_pred cccccccCcEEEEEEEEcCCCeEEEEEEeecccccCh-----HHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001847 677 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR-----NKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (1005)
Q Consensus 677 ~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~-----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 751 (1005)
++.||+|++|.||++.+ .|..+++|.......... .....+.+|+.++..+.|++|+....++......++||
T Consensus 1 ~~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~ 78 (211)
T PRK14879 1 MKLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVM 78 (211)
T ss_pred CcccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEE
Confidence 36789999999999987 677899997664322111 12345778999999999999888777777778889999
Q ss_pred eccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcc
Q 001847 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 823 (1005)
Q Consensus 752 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~ 823 (1005)
||++|++|.+++... .. ....++.+++.+|.+||+.|++|+|++|.|||++ ++.++|+|||.+..
T Consensus 79 e~~~G~~L~~~~~~~-----~~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 79 EYIEGEPLKDLINSN-----GM-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred EEeCCcCHHHHHHhc-----cH-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 999999999998653 12 7888999999999999999999999999999999 88999999998844
No 433
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.64 E-value=1.4e-16 Score=189.56 Aligned_cols=298 Identities=34% Similarity=0.550 Sum_probs=222.1
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 750 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 750 (1005)
.+.+.+++.+.+|+++.++.+.-..+|...+.|.......-....+.....+-.++-...+|.++...-.|......+++
T Consensus 803 ~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~ 882 (1205)
T KOG0606|consen 803 PDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLV 882 (1205)
T ss_pred CccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchh
Confidence 45788888999999999999988778866666655433221222223333333333333456666555556667788999
Q ss_pred EeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001847 751 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (1005)
Q Consensus 751 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 830 (1005)
++|.++++|...+...+ ..+.+-.+.++..+..+++|||...+.|+|++|.|+++..+|..++.|||.....+.-+..
T Consensus 883 ~~~~~~~~~~Skl~~~~--~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~ 960 (1205)
T KOG0606|consen 883 GHYLNGGDLPSKLHNSG--CLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPT 960 (1205)
T ss_pred hHHhccCCchhhhhcCC--CcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCccccccccccccCc
Confidence 99999999999987653 4777778888999999999999999999999999999999999999999954332211110
Q ss_pred -CC--Ccc-hhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001847 831 -LL--PTT-NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 906 (1005)
Q Consensus 831 -~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~ 906 (1005)
.. +.. ..-.+..+....+..............||+.|.+||.+.+......+|.|++|+++++.++|.+||.....
T Consensus 961 ~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tp 1040 (1205)
T KOG0606|consen 961 TDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETP 1040 (1205)
T ss_pred CCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcch
Confidence 00 000 00001111112222222344556677899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCC-CCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCChhhhhh
Q 001847 907 QKTFANILHKDLKFPSSTP-TSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRC 971 (1005)
Q Consensus 907 ~~~~~~i~~~~~~~~~~~~-~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~~~~~~~ 971 (1005)
...+..|..+.++|+.... .+.++++++..+|..+|.+|..++ ++.+...|+||+.++|+.+.-
T Consensus 1041 q~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~-~~~e~k~~~~~~~~~~~~l~~ 1105 (1205)
T KOG0606|consen 1041 QQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK-GAAEVKGHPFFQDVDWENLAL 1105 (1205)
T ss_pred hhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcc-cccccccCCccCCCCcccccc
Confidence 9999999999999987643 577899999999999999999943 245899999999999998743
No 434
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.63 E-value=2.6e-15 Score=157.17 Aligned_cols=133 Identities=19% Similarity=0.218 Sum_probs=107.5
Q ss_pred cccccCcEEEEEEEEcCCCeEEEEEEeecccccC-----hHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEec
Q 001847 679 PLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN-----RNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 753 (1005)
Q Consensus 679 ~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~-----~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~ 753 (1005)
.||+|++|.||++.. ++..+++|......... .....++.+|+.+++.+.|+++....-++...+..++||||
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 78 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEY 78 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEE
Confidence 379999999999985 67789999865432111 12235677899999999888766555556666778999999
Q ss_pred cCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcc
Q 001847 754 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 823 (1005)
Q Consensus 754 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~ 823 (1005)
++|++|.+++.... . .++.+++.+|.+||+.|++|+|++|.||+++ ++.++++|||++..
T Consensus 79 ~~g~~l~~~~~~~~------~---~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 79 IEGKPLKDVIEEGN------D---ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred ECCccHHHHHhhcH------H---HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 99999998875421 0 7889999999999999999999999999999 89999999998844
No 435
>PF13426 PAS_9: PAS domain; PDB: 3ULF_B 3UE6_E 2Z6D_B 2Z6C_B 3P7N_B 1LL8_A 3MJQ_A 3BWL_A 4EET_B 4EEP_A ....
Probab=99.62 E-value=5.7e-15 Score=136.27 Aligned_cols=104 Identities=26% Similarity=0.564 Sum_probs=96.2
Q ss_pred CCeEEEEeCCCCCCcEEEccHHHHHHcCCChhhhcCCCCCcCCCCCCChHHHHHHHHHHHcCCcEEEEEEEEecCCcEEE
Q 001847 202 QQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFW 281 (1005)
Q Consensus 202 ~~~i~i~D~~~~dg~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~w 281 (1005)
|+|++++|. +|+|+++|++|++++||++++++|+++..++++.........+.+.+..+..+..++..++++|+.+|
T Consensus 1 p~~i~i~d~---~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~~ 77 (104)
T PF13426_consen 1 PDGIFILDP---DGRILYVNPAFERLFGYSREELIGKSISDFFPEEDRPEFEEQIERALEEGGSWSGEVRLRRKDGETFW 77 (104)
T ss_dssp -SEEEEEET---TSBEEEE-HHHHHHHTS-HHHHTTSBGGGGCSTTSCHHHHHHHHHHHHHTSSEEEEEEEEETTSEEEE
T ss_pred CEEEEEECC---cCcEEehhHHHHHHHCcCHHHHcCCCcccccCcccchhhHHHHHHHHhcCCceeEEEEEEcCCCCEEE
Confidence 689999999 78899999999999999999999999998888887888889999999999999999999999999999
Q ss_pred EEEEeeeeecCCCCEEEEEEEEeccch
Q 001847 282 NLLTIAPIKDDEGKVLKFIGMQVEVSK 308 (1005)
Q Consensus 282 v~~~~~pi~d~~G~v~~~v~~~~DITe 308 (1005)
+.++++|+.+++|++.+++++++|||+
T Consensus 78 ~~~~~~~i~~~~g~~~~~i~~~~DiTe 104 (104)
T PF13426_consen 78 VEVSASPIRDEDGEITGIIGIFRDITE 104 (104)
T ss_dssp EEEEEEEEEETTSSEEEEEEEEEEEHH
T ss_pred EEEEEEEEECCCCCEEEEEEEEEECCC
Confidence 999999999999999999999999996
No 436
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.62 E-value=3.2e-15 Score=156.38 Aligned_cols=139 Identities=21% Similarity=0.156 Sum_probs=108.6
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccCh-------------------HHHHHHHHHHHHHHhCCCC-
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR-------------------NKVHRACAEREILDMLDHP- 732 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~-------------------~~~~~~~~E~~il~~l~hp- 732 (1005)
.|.+.+.||.|+||.||++.+ .+|+.+|||++........ ........|+.++..+.++
T Consensus 16 ~~~~~~~i~~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 94 (198)
T cd05144 16 VESLGNQIGVGKESDVYLALD-PDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEG 94 (198)
T ss_pred hhhcCCccccCcceEEEEEEc-CCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcC
Confidence 388899999999999999988 4799999998765321000 0112356788888888777
Q ss_pred -CcceEEEEEEeCCeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCC
Q 001847 733 -FVPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG 811 (1005)
Q Consensus 733 -nIv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g 811 (1005)
.++.+++. ...++||||++|++|..+... .....++.+|+.++.++|+.||+|+||||+||+++.++
T Consensus 95 i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~--------~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~ 162 (198)
T cd05144 95 FPVPKPIDW----NRHAVVMEYIDGVELYRVRVL--------EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDE 162 (198)
T ss_pred CCCCceeec----CCceEEEEEeCCcchhhcccc--------ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCC
Confidence 44555432 455899999999998765421 33567889999999999999999999999999999999
Q ss_pred cEEEEeccCCccc
Q 001847 812 HVSLTDFDLSCLT 824 (1005)
Q Consensus 812 ~vkL~DFG~a~~~ 824 (1005)
.++|+|||++...
T Consensus 163 ~~~liDfg~~~~~ 175 (198)
T cd05144 163 KIYIIDWPQMVST 175 (198)
T ss_pred cEEEEECCccccC
Confidence 9999999998543
No 437
>PF13426 PAS_9: PAS domain; PDB: 3ULF_B 3UE6_E 2Z6D_B 2Z6C_B 3P7N_B 1LL8_A 3MJQ_A 3BWL_A 4EET_B 4EEP_A ....
Probab=99.60 E-value=8.1e-15 Score=135.23 Aligned_cols=104 Identities=28% Similarity=0.460 Sum_probs=96.5
Q ss_pred cccEEEEcCCCCCCCEEeecHHHHHHcCCChhhhcCCCCCccCCCCCCHHHHHHHHHHHhcCCcEEEEEEEEecCCcEEE
Q 001847 485 EKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFW 564 (1005)
Q Consensus 485 ~~~I~i~D~~G~d~~i~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e~~~~~kdG~~~w 564 (1005)
|+||+++|.+|. |+++|++|++++||++++++|+++..+.+++........+.+.+..+..+..+..+.+++|+.+|
T Consensus 1 p~~i~i~d~~g~---i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~~ 77 (104)
T PF13426_consen 1 PDGIFILDPDGR---ILYVNPAFERLFGYSREELIGKSISDFFPEEDRPEFEEQIERALEEGGSWSGEVRLRRKDGETFW 77 (104)
T ss_dssp -SEEEEEETTSB---EEEE-HHHHHHHTS-HHHHTTSBGGGGCSTTSCHHHHHHHHHHHHHTSSEEEEEEEEETTSEEEE
T ss_pred CEEEEEECCcCc---EEehhHHHHHHHCcCHHHHcCCCcccccCcccchhhHHHHHHHHhcCCceeEEEEEEcCCCCEEE
Confidence 689999999888 99999999999999999999999999998888888889999999989889999999999999999
Q ss_pred EEEEEeeeeCCCCCEEEEEEEEecCcc
Q 001847 565 NLFHLQPMRDQKGEVQYFIGVQLDGSE 591 (1005)
Q Consensus 565 v~~~~~pi~d~~G~v~~~vgi~~DITe 591 (1005)
+++++.|+.+++|++.+++++++||||
T Consensus 78 ~~~~~~~i~~~~g~~~~~i~~~~DiTe 104 (104)
T PF13426_consen 78 VEVSASPIRDEDGEITGIIGIFRDITE 104 (104)
T ss_dssp EEEEEEEEEETTSSEEEEEEEEEEEHH
T ss_pred EEEEEEEEECCCCCEEEEEEEEEECCC
Confidence 999999999999999999999999996
No 438
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.59 E-value=1e-14 Score=175.69 Aligned_cols=139 Identities=21% Similarity=0.221 Sum_probs=111.8
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccc-----cChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 001847 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-----LNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 746 (1005)
Q Consensus 672 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~-----~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 746 (1005)
..|...+.||+|+||.||++.+... .+++|....... ........+.+|+.+++.++|++++.+..++.....
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~~~--~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~ 410 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYLGR--DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEE 410 (535)
T ss_pred cccCccceeccCCcEEEEEEeecCc--cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCC
Confidence 3567789999999999999987443 344443322111 111234567889999999999999988777777777
Q ss_pred EEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcc
Q 001847 747 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 823 (1005)
Q Consensus 747 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~ 823 (1005)
.++||||++|++|.+++. ....++.|++.+|.+||+.|++||||||+|||+ .++.++|+|||++..
T Consensus 411 ~~lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 411 KTIVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred CEEEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 899999999999998875 246789999999999999999999999999999 578999999999855
No 439
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.59 E-value=1.3e-16 Score=191.42 Aligned_cols=264 Identities=23% Similarity=0.354 Sum_probs=205.8
Q ss_pred cCCccccccccccCcEEEEEEEEcCC-CeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCeEE
Q 001847 671 LQHFRPIKPLGSGDTGSVHLVELCGS-GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVC 748 (1005)
Q Consensus 671 ~~~y~~~~~LG~G~~g~Vy~a~~~~~-~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~ 748 (1005)
...|.+.+.||+|+|+.|-.+....+ ...+++|.+.... ...........|..+-+.+. |.|++.+++........+
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~-~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~ 97 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP-KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYL 97 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCC-CccchhhhcCccccccccccccccccccCCccCCCcccc
Confidence 34789999999999999998887433 4567777665432 23334455556777777776 999999999999999999
Q ss_pred EEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH-HcCcccCCCCCCcEEEecCC-cEEEEeccCCcccCC
Q 001847 749 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH-CQGIIYRDLKPENVLLQGNG-HVSLTDFDLSCLTSC 826 (1005)
Q Consensus 749 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH-~~gIvHrDLkP~NILi~~~g-~vkL~DFG~a~~~~~ 826 (1005)
++++|..|++++..+........+......++.|+..++.|+| ..++.|+||||+|.+++.++ .+++.|||+|.....
T Consensus 98 ~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~ 177 (601)
T KOG0590|consen 98 LSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRN 177 (601)
T ss_pred cccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhccccc
Confidence 9999999999999883222224777888899999999999999 99999999999999999999 999999999955432
Q ss_pred CCCCCCCcchhhhhcccCCCCCccccccccccccccc-CCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001847 827 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVG-TEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGK 904 (1005)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-t~~y~aPE~l~~~-~~~~~sDIwSlGvll~eLltG~~Pf~~~ 904 (1005)
. .+........+| ++.|+|||.+.+. ...+..|+||+|+++..+++|..|+...
T Consensus 178 ~------------------------~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~ 233 (601)
T KOG0590|consen 178 K------------------------NGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFP 233 (601)
T ss_pred c------------------------CCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccc
Confidence 0 011122344577 9999999999884 4567899999999999999999999765
Q ss_pred ChHHHH-HHHHhC--CCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCC
Q 001847 905 TRQKTF-ANILHK--DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 963 (1005)
Q Consensus 905 ~~~~~~-~~i~~~--~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~ 963 (1005)
...... ...... ......+...+....+++.+++..+|..|.+ ++++..++|+..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s----~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 234 SRKDGRYSSWKSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLS----IEELKLDNWLSS 291 (601)
T ss_pred ccccccceeecccccccccCccccCChhhhhcccccccCCchhccc----cccccccccccc
Confidence 443322 222221 2234445556778889999999999999999 999999999998
No 440
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.56 E-value=2.3e-14 Score=148.29 Aligned_cols=138 Identities=20% Similarity=0.220 Sum_probs=99.3
Q ss_pred cccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHH---------------------HHHHHHHHHHhCCCC--C
Q 001847 677 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVH---------------------RACAEREILDMLDHP--F 733 (1005)
Q Consensus 677 ~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~---------------------~~~~E~~il~~l~hp--n 733 (1005)
.+.||+|+||.||+|.+. ++..||||++............ ....|...+..+.+. .
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 578999999999999985 7899999998764221111111 113455666666443 3
Q ss_pred cceEEEEEEeCCeEEEEEeccCCCchhh-HHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCcccCCCCCCcEEEecCC
Q 001847 734 VPALYASFQTKTHVCLITDYCPGGELFL-LLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNG 811 (1005)
Q Consensus 734 Iv~l~~~~~~~~~~~lV~E~~~ggsL~~-~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~-~gIvHrDLkP~NILi~~~g 811 (1005)
+++++.+ ...++||||++++++.. .+.... . ...++.++.+++.++.++|. .||+|+||||+||+++ ++
T Consensus 81 ~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~---~-~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~~ 151 (187)
T cd05119 81 VPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR---L-LEDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-DG 151 (187)
T ss_pred CCceEec----CCCEEEEEEeCCCCccChhhhhhh---h-cccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-CC
Confidence 5555543 23589999998854432 121110 1 16678899999999999999 9999999999999999 99
Q ss_pred cEEEEeccCCccc
Q 001847 812 HVSLTDFDLSCLT 824 (1005)
Q Consensus 812 ~vkL~DFG~a~~~ 824 (1005)
.++|+|||.+...
T Consensus 152 ~~~liDfg~a~~~ 164 (187)
T cd05119 152 KVYIIDVPQAVEI 164 (187)
T ss_pred cEEEEECcccccc
Confidence 9999999998544
No 441
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.55 E-value=1.7e-14 Score=165.44 Aligned_cols=199 Identities=23% Similarity=0.330 Sum_probs=152.1
Q ss_pred HHhCCCCCcceEEEEEEeCCeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc-ccCCCCCCc
Q 001847 726 LDMLDHPFVPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGI-IYRDLKPEN 804 (1005)
Q Consensus 726 l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gI-vHrDLkP~N 804 (1005)
|+.+.|.|+.++++.+.++..+++|.+||..|+|.+.+... ...++......++++|+.||.|||...| .|+.++++|
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~-~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~n 79 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNE-DIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSN 79 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcc-ccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeecccc
Confidence 35678999999999999999999999999999999999763 3458888889999999999999998755 999999999
Q ss_pred EEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCC-------
Q 001847 805 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG------- 877 (1005)
Q Consensus 805 ILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~------- 877 (1005)
.+++..+.+||.|||+......... ........-...|.|||.+....
T Consensus 80 Clvd~~w~lklt~~Gl~~~~~~~~~-------------------------~~~~~~~~~~~lw~aPellr~~~~~~~~~~ 134 (484)
T KOG1023|consen 80 CLVDSRWVLKLTDFGLNSLLEETAE-------------------------PEAHHPIRKALLWTAPELLRGALSQSLESA 134 (484)
T ss_pred ceeeeeEEEEechhhhccccccccc-------------------------ccccchhHHHHhccCHHHhccccccccccc
Confidence 9999999999999999855431000 00111122456799999986631
Q ss_pred CCChhhHHHHHHHHHHHHcCCCCCCCCC----hHHHHHHHHh-CCCCCCC----CCCCCHHHHHHHHHccccCcCccCCC
Q 001847 878 HTSAVDWWALGILLYEMLYGYTPFRGKT----RQKTFANILH-KDLKFPS----STPTSLHAKQLMYRLLHRDPKSRLGS 948 (1005)
Q Consensus 878 ~~~~sDIwSlGvll~eLltG~~Pf~~~~----~~~~~~~i~~-~~~~~~~----~~~~s~~l~~Ll~~~L~~dP~~Rpt~ 948 (1005)
.+.+.||||||+++||+++.+.||.... ..+.+..+.+ +...+.. ......++..++..||..+|..||++
T Consensus 135 ~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~ 214 (484)
T KOG1023|consen 135 LTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSI 214 (484)
T ss_pred ccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccH
Confidence 3567999999999999999999997522 2344444444 2211111 11234468899999999999999995
Q ss_pred hh
Q 001847 949 HE 950 (1005)
Q Consensus 949 ~~ 950 (1005)
..
T Consensus 215 ~~ 216 (484)
T KOG1023|consen 215 EQ 216 (484)
T ss_pred HH
Confidence 44
No 442
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.53 E-value=8.7e-14 Score=149.48 Aligned_cols=137 Identities=23% Similarity=0.351 Sum_probs=104.8
Q ss_pred cccc-ccCcEEEEEEEEcCCCeEEEEEEeecccc----------cChHHHHHHHHHHHHHHhCCCCCc--ceEEEEEEeC
Q 001847 678 KPLG-SGDTGSVHLVELCGSGQYFAMKAMDKGVM----------LNRNKVHRACAEREILDMLDHPFV--PALYASFQTK 744 (1005)
Q Consensus 678 ~~LG-~G~~g~Vy~a~~~~~~~~valK~~~~~~~----------~~~~~~~~~~~E~~il~~l~hpnI--v~l~~~~~~~ 744 (1005)
..|| .|+.|+||.+.. .+..++||.+..... .......++.+|+.++..|.|++| +.++++....
T Consensus 37 ~~lg~~~g~gtv~~v~~--~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQT--PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred ceeecCCCCccEEEEEe--CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 4466 888888998887 477899998864221 011234567889999999988775 6777664432
Q ss_pred -C---eEEEEEeccCC-CchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEecc
Q 001847 745 -T---HVCLITDYCPG-GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFD 819 (1005)
Q Consensus 745 -~---~~~lV~E~~~g-gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG 819 (1005)
. ..++|||+++| .+|.+++... .++... +.||+.+|.+||++||+|+||||.|||++.++.++|+|||
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~---~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg 187 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEA---PLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFD 187 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcC---CCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECC
Confidence 2 23599999987 6898887642 355443 5789999999999999999999999999999999999999
Q ss_pred CCcc
Q 001847 820 LSCL 823 (1005)
Q Consensus 820 ~a~~ 823 (1005)
.+..
T Consensus 188 ~~~~ 191 (239)
T PRK01723 188 RGEL 191 (239)
T ss_pred Cccc
Confidence 8844
No 443
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.50 E-value=1.8e-13 Score=135.34 Aligned_cols=132 Identities=23% Similarity=0.245 Sum_probs=111.8
Q ss_pred ccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCC--CCcceEEEEEEeCCeEEEEEec
Q 001847 676 PIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH--PFVPALYASFQTKTHVCLITDY 753 (1005)
Q Consensus 676 ~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~h--pnIv~l~~~~~~~~~~~lV~E~ 753 (1005)
+++.||.|.++.||++.+. +..+++|.+..... ...+..|+.+++.+.+ .++++++.++...+..+++|||
T Consensus 2 ~~~~i~~g~~~~v~~~~~~--~~~~~iK~~~~~~~-----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~ 74 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTK--DEDYVLKINPSREK-----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEW 74 (155)
T ss_pred cceecccccccceEEEEec--CCeEEEEecCCCCc-----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEe
Confidence 4678999999999999984 37899998865421 4567889999999976 5899999988888889999999
Q ss_pred cCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHc---CcccCCCCCCcEEEecCCcEEEEeccCCcc
Q 001847 754 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ---GIIYRDLKPENVLLQGNGHVSLTDFDLSCL 823 (1005)
Q Consensus 754 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~---gIvHrDLkP~NILi~~~g~vkL~DFG~a~~ 823 (1005)
+.+..+..+ +......++.+++.+|++||.. +++|+|++|+||+++..+.++++|||.+..
T Consensus 75 ~~g~~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 75 IEGETLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred cCCeecccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 988777554 4456677889999999999985 799999999999999989999999998854
No 444
>PF08448 PAS_4: PAS fold; InterPro: IPR013656 The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs []. The PAS fold appears in archaea, eubacteria and eukarya. ; PDB: 3K3D_A 3K3C_B 3KX0_X 3FC7_B 3LUQ_D 3MXQ_A 3BWL_C 3FG8_A.
Probab=99.49 E-value=2.5e-13 Score=126.73 Aligned_cols=110 Identities=24% Similarity=0.365 Sum_probs=98.9
Q ss_pred HHhcCCeEEEEeCCCCCCcEEEccHHHHHHcCCChhhhcCCCCCcCCCCCCChHHHHHHHHHHHcCCcEEEEEEEEecCC
Q 001847 198 LSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDG 277 (1005)
Q Consensus 198 le~~~~~i~i~D~~~~dg~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kdG 277 (1005)
|++++++++++|. +|+|+++|+++++++|++.++++|+++..++++.........+.+++.++.....+..... +|
T Consensus 1 l~~~p~~i~v~D~---~~~i~~~N~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 76 (110)
T PF08448_consen 1 LDSSPDGIFVIDP---DGRIVYANQAAAELFGVSPEELIGRSLFDLLPPEDREEFQAALRRALAGGEPVFFEEILLR-DG 76 (110)
T ss_dssp HHHCSSEEEEEET---TSBEEEE-HHHHHHHTSTHHHHTTSBHHHHSCCGCHHHHHHHHHHHHHHTSEEEEEEEECT-TS
T ss_pred CCCCCceeEEECC---CCEEEEEHHHHHHHhCCCHHHHhhccchhccccchhhhhHHHHHHhhccCceEEEEEEEee-cC
Confidence 6899999999999 8889999999999999999999999999888887777788888899998887776665544 99
Q ss_pred cEEEEEEEeeeeecCCCCEEEEEEEEeccchhhH
Q 001847 278 TPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTE 311 (1005)
Q Consensus 278 ~~~wv~~~~~pi~d~~G~v~~~v~~~~DITerk~ 311 (1005)
..+|+.+++.|+.|.+|++.|++++++|||++|+
T Consensus 77 ~~~~~~~~~~Pi~~~~g~~~g~~~~~~DiT~~rr 110 (110)
T PF08448_consen 77 EERWFEVSISPIFDEDGEVVGVLVIIRDITERRR 110 (110)
T ss_dssp CEEEEEEEEEEEECTTTCEEEEEEEEEEECCHHH
T ss_pred CcEEEEEEEEEeEcCCCCEEEEEEEEEECchhhC
Confidence 9999999999999999999999999999999985
No 445
>PF00989 PAS: PAS fold; InterPro: IPR013767 PAS domains are involved in many signalling proteins where they are used as a signal sensor domain []. PAS domains appear in archaea, bacteria and eukaryotes. Several PAS-domain proteins are known to detect their signal by way of an associated cofactor. Haeme, flavin, and a 4-hydroxycinnamyl chromophore are used in different proteins. The PAS domain was named after three proteins that it occurs in: Per- period circadian protein Arnt- Ah receptor nuclear translocator protein Sim- single-minded protein. PAS domains are often associated with PAC domains IPR001610 from INTERPRO. It appears that these domains are directly linked, and that together they form the conserved 3D PAS fold. The division between the PAS and PAC domains is caused by major differences in sequences in the region connecting these two motifs []. In human PAS kinase, this region has been shown to be very flexible, and adopts different conformations depending on the bound ligand []. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels [].; GO: 0006355 regulation of transcription, DNA-dependent; PDB: 2GJ3_A 4F3L_B 1XFN_A 1OTD_A 2PYR_A 1KOU_A 1XFQ_A 2ZOI_A 2ZOH_A 1OTA_A ....
Probab=99.48 E-value=3.1e-13 Score=126.76 Aligned_cols=112 Identities=21% Similarity=0.385 Sum_probs=95.6
Q ss_pred HHHHHHHHhcCCeEEEEeCCCCCCcEEEccHHHHHHcCCChhhhcCCCCCcCCCCCCChHHHHHHHHHHHcCCcEEE-EE
Q 001847 192 DIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCG-RL 270 (1005)
Q Consensus 192 ~~l~~ile~~~~~i~i~D~~~~dg~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~-e~ 270 (1005)
++|++++++++++++++|. +|+|+++|++|++++||+.++++|+++..++++.........+.+.+..+..... +.
T Consensus 1 e~~~~i~~~~~~~i~~~d~---~g~I~~~N~a~~~l~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (113)
T PF00989_consen 1 ERYRAILENSPDGIFVIDE---DGRILYVNQAAEELLGYSREELIGKSLFDLIHPEDRRELRERLRQALSQGESGESFEV 77 (113)
T ss_dssp HHHHHHHHCSSSEEEEEET---TSBEEEECHHHHHHHSS-HHHHTTSBGGGGCSGGGHHHHHHHHHHHHHHCCHECEEEE
T ss_pred CHHHHHHhcCCceEEEEeC---cCeEEEECHHHHHHHccCHHHHcCCcHHHhcCchhhHHHHHHHHHHHHcCCCceeEEE
Confidence 5789999999999999998 8889999999999999999999999999887776655677778888877766443 34
Q ss_pred EEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecc
Q 001847 271 LNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEV 306 (1005)
Q Consensus 271 ~~~~kdG~~~wv~~~~~pi~d~~G~v~~~v~~~~DI 306 (1005)
....++|..+|+.+..+|+++.+|++.|++++++||
T Consensus 78 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~DI 113 (113)
T PF00989_consen 78 RFRLRDGRPRWVEVRASPVRDEDGQIIGILVIFRDI 113 (113)
T ss_dssp EEEETTSCEEEEEEEEEEEEETTEEEEEEEEEEEE-
T ss_pred EEEecCCcEEEEEEEEEEEEeCCCCEEEEEEEEEeC
Confidence 444469999999999999999999999999999997
No 446
>PF08448 PAS_4: PAS fold; InterPro: IPR013656 The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs []. The PAS fold appears in archaea, eubacteria and eukarya. ; PDB: 3K3D_A 3K3C_B 3KX0_X 3FC7_B 3LUQ_D 3MXQ_A 3BWL_C 3FG8_A.
Probab=99.47 E-value=2.1e-13 Score=127.21 Aligned_cols=110 Identities=25% Similarity=0.335 Sum_probs=99.7
Q ss_pred HHhccccEEEEcCCCCCCCEEeecHHHHHHcCCChhhhcCCCCCccCCCCCCHHHHHHHHHHHhcCCcEEEEEEEEecCC
Q 001847 481 LERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSG 560 (1005)
Q Consensus 481 ~e~~~~~I~i~D~~G~d~~i~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e~~~~~kdG 560 (1005)
|+++|++|+++|.+|+ |+++|+++++++|++.++++|+++..+.++.........+.+++.++.....+..... +|
T Consensus 1 l~~~p~~i~v~D~~~~---i~~~N~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 76 (110)
T PF08448_consen 1 LDSSPDGIFVIDPDGR---IVYANQAAAELFGVSPEELIGRSLFDLLPPEDREEFQAALRRALAGGEPVFFEEILLR-DG 76 (110)
T ss_dssp HHHCSSEEEEEETTSB---EEEE-HHHHHHHTSTHHHHTTSBHHHHSCCGCHHHHHHHHHHHHHHTSEEEEEEEECT-TS
T ss_pred CCCCCceeEEECCCCE---EEEEHHHHHHHhCCCHHHHhhccchhccccchhhhhHHHHHHhhccCceEEEEEEEee-cC
Confidence 6899999999999888 9999999999999999999999999888888777788889999988887776666655 99
Q ss_pred cEEEEEEEEeeeeCCCCCEEEEEEEEecCccCcc
Q 001847 561 KKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLE 594 (1005)
Q Consensus 561 ~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerK~ 594 (1005)
..+|+.+++.|++|.+|.+.+++++++|||++|+
T Consensus 77 ~~~~~~~~~~Pi~~~~g~~~g~~~~~~DiT~~rr 110 (110)
T PF08448_consen 77 EERWFEVSISPIFDEDGEVVGVLVIIRDITERRR 110 (110)
T ss_dssp CEEEEEEEEEEEECTTTCEEEEEEEEEEECCHHH
T ss_pred CcEEEEEEEEEeEcCCCCEEEEEEEEEECchhhC
Confidence 9999999999999999999999999999999875
No 447
>PRK09776 putative diguanylate cyclase; Provisional
Probab=99.46 E-value=8.5e-14 Score=183.06 Aligned_cols=269 Identities=10% Similarity=-0.019 Sum_probs=194.9
Q ss_pred cccccccccccccccccccchHHHHHHHHHhcCCeEEEEeCCCCCCcEEEccHHHHHHcCCChhhhcCCC-CCcCCCCCC
Q 001847 170 SVRSSGEMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRN-CRFLQGAGT 248 (1005)
Q Consensus 170 ~~~~~~dit~~~~~e~~L~~~~~~l~~ile~~~~~i~i~D~~~~dg~I~~vN~a~~~l~Gys~eEllG~~-~~~l~~~~~ 248 (1005)
.+....|||++++++++++++++.++.+++..+++++.+|. +|+++++|+++++++||+.++..+.. +..+.++++
T Consensus 388 ~i~~~~DITerk~~e~~l~~~~~~~~~~~~~~~~~i~~~d~---~~~~~~~n~~~~~l~G~~~~~~~~~~~~~~~~~p~d 464 (1092)
T PRK09776 388 FIAQIEDINELKRTEQVNERLMERITLANEAGGIGIWEWDL---KPNIISWDKRMFELYEIPPHIKPTWQVWYACLHPED 464 (1092)
T ss_pred ehhhHHhhHHHHHHHHHHHHHHHHHHHHHHhcCceEEEEec---CCCeEeeCHHHHHHhCCCcccCCCHHHHHHhcCHhH
Confidence 33445899999999999999999999999999999999999 67799999999999999998854432 223456666
Q ss_pred ChHHHHHHHHHHHcCCcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhhcCCCCCchhhh
Q 001847 249 DPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLI 328 (1005)
Q Consensus 249 ~~~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~v~~~v~~~~DITerk~~E~~L~~~~~~l~~~l~ 328 (1005)
.......+...+..+..+..+++.+++|| .+|+.....+++|++|.+.+++++.+|||++|+++++++...++
T Consensus 465 ~~~~~~~~~~~~~~~~~~~~e~r~~~~dG-~~w~~~~~~~~~d~~G~~~~~ig~~~DITerk~~e~~L~~~~~~------ 537 (1092)
T PRK09776 465 RQRVEKEIRDALQGRSPFKLEFRIVVKDG-VRHIRALANRVLNKDGEVERLLGINMDMTEVRQLNEALFQEKER------ 537 (1092)
T ss_pred HHHHHHHHHHHHhcCCCeeEEEEEEcCCc-eEEEEEeeEEEECCCCCEEEEEeeeeehhHHHHHHHHHHHHHHH------
Confidence 66666777888888889999999999999 99999999999999999999999999999999999887732110
Q ss_pred hHHHHHHHHhhhhHHHHHHHccCCCCcccCCCCCcccccCCCCchhhhcccccCCCCCCCCCCCCCC-CC-CCcccccc-
Q 001847 329 RYDARQKEMATSSVTELVQAMKKPRSLSESTNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNS-YG-GGCRTSMQ- 405 (1005)
Q Consensus 329 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~-~~~~~~~~- 405 (1005)
... .+...-......+..-....+|.......|++.+++.|+...+++....... .. ........
T Consensus 538 -----l~~-------~l~~~~~~i~~~D~~g~i~~~N~a~~~l~G~~~~e~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~ 605 (1092)
T PRK09776 538 -----LHI-------TLDSIGEAVVCTDMAMKVTFMNPVAEKMTGWTQEEALGVPLLTVLHITFGDNGPLMENIYSCLTS 605 (1092)
T ss_pred -----HHH-------HHhccccEEEEECCCCeEEEEcHHHHHHhCCCHHHHcCCCHHHHcccccCCcchhhHHHHHHHhc
Confidence 000 1111112223334444556788888889999999999998877654311110 00 00000000
Q ss_pred ---cccccchhhccccCCcccccccccccccCCCCCCccccccccCCCCCCCCCCCCCchhhHHHHHHHhh
Q 001847 406 ---RISEVPEKKKQKSGRRSFMGLIGRKSQSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRK 473 (1005)
Q Consensus 406 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~er~~~e~~l~~ 473 (1005)
...........++|...|+.....+..+.++...+...+ .+|+|++++.+++++.
T Consensus 606 ~~~~~~~~~~~~~~~~G~~~~~~~~~~pi~~~~g~~~g~v~~-------------~~DITe~k~~e~~L~~ 663 (1092)
T PRK09776 606 RSAAYLEQDVVLHCRSGGSYDVHYSITPLSTLDGENIGSVLV-------------IQDVTESRKMLRQLSY 663 (1092)
T ss_pred CCCccccceEEEEeCCCcEEEEEEEeeeeecCCCCEEEEEEE-------------EEecchHHHHHHHHHh
Confidence 111223334577888888888888887776665443333 5789999999998854
No 448
>PF00989 PAS: PAS fold; InterPro: IPR013767 PAS domains are involved in many signalling proteins where they are used as a signal sensor domain []. PAS domains appear in archaea, bacteria and eukaryotes. Several PAS-domain proteins are known to detect their signal by way of an associated cofactor. Haeme, flavin, and a 4-hydroxycinnamyl chromophore are used in different proteins. The PAS domain was named after three proteins that it occurs in: Per- period circadian protein Arnt- Ah receptor nuclear translocator protein Sim- single-minded protein. PAS domains are often associated with PAC domains IPR001610 from INTERPRO. It appears that these domains are directly linked, and that together they form the conserved 3D PAS fold. The division between the PAS and PAC domains is caused by major differences in sequences in the region connecting these two motifs []. In human PAS kinase, this region has been shown to be very flexible, and adopts different conformations depending on the bound ligand []. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels [].; GO: 0006355 regulation of transcription, DNA-dependent; PDB: 2GJ3_A 4F3L_B 1XFN_A 1OTD_A 2PYR_A 1KOU_A 1XFQ_A 2ZOI_A 2ZOH_A 1OTA_A ....
Probab=99.45 E-value=5.2e-13 Score=125.24 Aligned_cols=111 Identities=22% Similarity=0.331 Sum_probs=95.9
Q ss_pred cHHHHHHhccccEEEEcCCCCCCCEEeecHHHHHHcCCChhhhcCCCCCccCCCCCCHHHHHHHHHHHhcCCcEE-EEEE
Q 001847 476 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVT-VQLI 554 (1005)
Q Consensus 476 ~l~~i~e~~~~~I~i~D~~G~d~~i~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~-~e~~ 554 (1005)
+|+.++++++++++++|.+|. |+++|++|+++|||+.++++|+++..++++++.......+...+..+.... .+..
T Consensus 2 ~~~~i~~~~~~~i~~~d~~g~---I~~~N~a~~~l~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (113)
T PF00989_consen 2 RYRAILENSPDGIFVIDEDGR---ILYVNQAAEELLGYSREELIGKSLFDLIHPEDRRELRERLRQALSQGESGESFEVR 78 (113)
T ss_dssp HHHHHHHCSSSEEEEEETTSB---EEEECHHHHHHHSS-HHHHTTSBGGGGCSGGGHHHHHHHHHHHHHHCCHECEEEEE
T ss_pred HHHHHHhcCCceEEEEeCcCe---EEEECHHHHHHHccCHHHHcCCcHHHhcCchhhHHHHHHHHHHHHcCCCceeEEEE
Confidence 489999999999999999888 999999999999999999999999988888766667777788777766543 4455
Q ss_pred EEecCCcEEEEEEEEeeeeCCCCCEEEEEEEEecC
Q 001847 555 NYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDG 589 (1005)
Q Consensus 555 ~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DI 589 (1005)
...++|+.+|+.++..|+++.+|.+.+++++++||
T Consensus 79 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~DI 113 (113)
T PF00989_consen 79 FRLRDGRPRWVEVRASPVRDEDGQIIGILVIFRDI 113 (113)
T ss_dssp EEETTSCEEEEEEEEEEEEETTEEEEEEEEEEEE-
T ss_pred EEecCCcEEEEEEEEEEEEeCCCCEEEEEEEEEeC
Confidence 55579999999999999999999999999999998
No 449
>PRK13559 hypothetical protein; Provisional
Probab=99.42 E-value=2.7e-12 Score=147.33 Aligned_cols=143 Identities=38% Similarity=0.717 Sum_probs=117.8
Q ss_pred ccHHHHHHhccccEEEEcCCCCCCCEEeecHHHHHHcCCChhhhcCCCCCccCCCCCCHHHHHHHHHHHhcCCcEEEEEE
Q 001847 475 IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLI 554 (1005)
Q Consensus 475 ~~l~~i~e~~~~~I~i~D~~G~d~~i~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e~~ 554 (1005)
..|+.++++++++|+++|.+|.+++|+++|++|++++||+.++++|+++..+.++.........+...+..+..+..+..
T Consensus 43 ~~~~~~~e~~~~~i~i~D~~~~~g~i~~~N~a~~~l~G~~~~e~iG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 122 (361)
T PRK13559 43 RLFEQAMEQTRMAMCITDPHQPDLPIVLANQAFLDLTGYAAEEVVGRNCRFLQGAATDPIAVAKIRAAIAAEREIVVELL 122 (361)
T ss_pred hHHHHHHHhCCCcEEEecCCCCCCcEEEEchHHHHHhCCCHHHHcCCChhhhcCCCCCHHHHHHHHHHhccCCceEEEEE
Confidence 34888999999999999986655669999999999999999999999988777777766667777888888888888999
Q ss_pred EEecCCcEEEEEEEEeeeeCCCCCEEEEEEEEecCccCccccccCCchhhHHHHHHHHHHHhhhhhhhh
Q 001847 555 NYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNSIPEATAEESEKLVKQTAENVNEAV 623 (1005)
Q Consensus 555 ~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerK~~e~~~~~~~~~~e~~~l~~~~~~~v~~~v 623 (1005)
.+++||..+|+..+..|+++.+|.+.+++++++|||++|+.++ .+++..++++.+.|.+++.+
T Consensus 123 ~~~~dG~~~~~~~~~~~i~d~~G~~~~~v~~~~DITerk~~e~------~~~~~~~l~~~l~H~~~n~L 185 (361)
T PRK13559 123 NYRKDGEPFWNALHLGPVYGEDGRLLYFFGSQWDVTDIRAVRA------LEAHERRLAREVDHRSKNVF 185 (361)
T ss_pred EEcCCCCEEEEEEEEEEEEcCCCCEEEeeeeeeehhcchhhHH------HHHHHHHHHHHHHHhhhhHH
Confidence 9999999999999999999999999999999999999998532 22333444455555554443
No 450
>PRK13557 histidine kinase; Provisional
Probab=99.40 E-value=2e-12 Score=156.50 Aligned_cols=149 Identities=38% Similarity=0.697 Sum_probs=123.4
Q ss_pred ccHHHHHHhccccEEEEcCCCCCCCEEeecHHHHHHcCCChhhhcCCCCCccCCCCCCHHHHHHHHHHHhcCCcEEEEEE
Q 001847 475 IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLI 554 (1005)
Q Consensus 475 ~~l~~i~e~~~~~I~i~D~~G~d~~i~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e~~ 554 (1005)
..|+.++++++++|+++|.++.+++|+|+|++|++++||+.+|++|+++..+.+++........++..+..+..+..+.+
T Consensus 30 ~~~~~~~~~~~~~i~v~d~~~~~g~i~~~N~a~~~~~G~~~~e~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (540)
T PRK13557 30 DIFFAAVETTRMPMIVTDPNQPDNPIVFANRAFLEMTGYAAEEIIGNNCRFLQGPETDRATVAEVRDAIAERREIATEIL 109 (540)
T ss_pred HHHHHHHHhCcCcEEEEcCCCCCCCEEEEcHHHHHHhCCCHHHhcCCChHhhcCCCCCHHHHHHHHHHHHcCCCceEEEE
Confidence 45999999999999999986556669999999999999999999999998888888877778888888888888888888
Q ss_pred EEecCCcEEEEEEEEeeeeCCCCCEEEEEEEEecCccCccccccCCchhhHHHHHHHHHHHhhhhhhhh
Q 001847 555 NYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNSIPEATAEESEKLVKQTAENVNEAV 623 (1005)
Q Consensus 555 ~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerK~~e~~~~~~~~~~e~~~l~~~~~~~v~~~v 623 (1005)
..+++|+.+|+.+++.|+++.+|.+++++++.+|||++++.+++.......+.+...+..+.|.+++.+
T Consensus 110 ~~~~~G~~~~~~~~~~~i~~~~g~~~~~~~~~~dit~~~~~e~~l~~~~~~~~l~~~~~~i~h~l~~pl 178 (540)
T PRK13557 110 NYRKDGSSFWNALFVSPVYNDAGDLVYFFGSQLDVSRRRDAEDALRQAQKMEALGQLTGGIAHDFNNLL 178 (540)
T ss_pred EEeCCCCEEEEEEEEEEeECCCCCEEEEEEEecChHHHHHHHHHHHHHHHHHHhhhhhhhhhHHhhhHH
Confidence 899999999999999999999999999999999999999865444333333334444444555555444
No 451
>PRK13559 hypothetical protein; Provisional
Probab=99.39 E-value=8.5e-12 Score=143.22 Aligned_cols=129 Identities=40% Similarity=0.748 Sum_probs=114.5
Q ss_pred chHHHHHHHHHhcCCeEEEEeCCCCCCcEEEccHHHHHHcCCChhhhcCCCCCcCCCCCCChHHHHHHHHHHHcCCcEEE
Q 001847 189 RVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCG 268 (1005)
Q Consensus 189 ~~~~~l~~ile~~~~~i~i~D~~~~dg~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~ 268 (1005)
.+.+.|+.++++++++|+++|..+.+|+|+++|++|++++||+.+|++|+++..+.++.........+...+..+..+..
T Consensus 40 ~~~~~~~~~~e~~~~~i~i~D~~~~~g~i~~~N~a~~~l~G~~~~e~iG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (361)
T PRK13559 40 ASGRLFEQAMEQTRMAMCITDPHQPDLPIVLANQAFLDLTGYAAEEVVGRNCRFLQGAATDPIAVAKIRAAIAAEREIVV 119 (361)
T ss_pred hhhhHHHHHHHhCCCcEEEecCCCCCCcEEEEchHHHHHhCCCHHHHcCCChhhhcCCCCCHHHHHHHHHHhccCCceEE
Confidence 45677899999999999999987668889999999999999999999999988777666666666777888888888888
Q ss_pred EEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhh
Q 001847 269 RLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 317 (1005)
Q Consensus 269 e~~~~~kdG~~~wv~~~~~pi~d~~G~v~~~v~~~~DITerk~~E~~L~ 317 (1005)
+...+++||..+|+.+++.|+++.+|.+.+++++++|||++|+++++++
T Consensus 120 e~~~~~~dG~~~~~~~~~~~i~d~~G~~~~~v~~~~DITerk~~e~~~~ 168 (361)
T PRK13559 120 ELLNYRKDGEPFWNALHLGPVYGEDGRLLYFFGSQWDVTDIRAVRALEA 168 (361)
T ss_pred EEEEEcCCCCEEEEEEEEEEEEcCCCCEEEeeeeeeehhcchhhHHHHH
Confidence 9998999999999999999999999999999999999999998875543
No 452
>PRK11091 aerobic respiration control sensor protein ArcB; Provisional
Probab=99.39 E-value=2.3e-12 Score=163.22 Aligned_cols=136 Identities=14% Similarity=0.107 Sum_probs=121.4
Q ss_pred CCCchhhHHHHHHHhhc-ccHHHHHHhccccEEEEcCCCCCCCEEeecHHHHHHcCCChhhhcCCCCCccCCCCCCHHHH
Q 001847 458 RPDSVDDKVRQKEMRKG-IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATV 536 (1005)
Q Consensus 458 ~~~~~er~~~e~~l~~~-~~l~~i~e~~~~~I~i~D~~G~d~~i~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~ 536 (1005)
..++.+|++.++++++. ..++.++++++++|+++|.+|+ |+++|++|++++||+.++++|+++..+.+++......
T Consensus 137 ~~~i~~r~~~~~~l~~~~~~l~~il~~~~~~i~~~D~~g~---i~~~N~a~~~l~G~~~~eliG~~~~~l~~~~~~~~~~ 213 (779)
T PRK11091 137 KNEIKEREETQIELEQQSSLLRSFLDASPDLVYYRNEDGE---FSGCNRAMELLTGKSEKQLIGLTPKDVYSPEAAEKVI 213 (779)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCcceEEEECCCCc---EEeEcHHHHHHhCcCHHHHcCCChHHhCCHHHHHHHH
Confidence 35677788888888766 6699999999999999999888 9999999999999999999999988888877666666
Q ss_pred HHHHHHHhcCCcEEEEEEEEecCCcEEEEEEEEeeeeCCCCCEEEEEEEEecCccCcccc
Q 001847 537 RKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPL 596 (1005)
Q Consensus 537 ~~i~~~l~~~~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerK~~e 596 (1005)
......+..+..+..+.+..++||..+|+.++..|+++.+|.+.+++++++|||++|+.+
T Consensus 214 ~~~~~~~~~~~~~~~e~~~~~~~G~~~~~~~~~~pi~~~~g~~~g~v~~~~DITe~k~~e 273 (779)
T PRK11091 214 ETDEKVFRHNVSLTYEQWLDYPDGRKACFELRKVPFYDRVGKRHGLMGFGRDITERKRYQ 273 (779)
T ss_pred HHHHHHHhcCCCeEEEEEEEcCCCCEEEEEEEeeeEEcCCCCEEEEEEEEeehhHHHHHH
Confidence 666777788888899999999999999999999999999999999999999999999853
No 453
>PRK13557 histidine kinase; Provisional
Probab=99.39 E-value=3.7e-12 Score=154.14 Aligned_cols=133 Identities=37% Similarity=0.735 Sum_probs=121.0
Q ss_pred ccccchHHHHHHHHHhcCCeEEEEeCCCCCCcEEEccHHHHHHcCCChhhhcCCCCCcCCCCCCChHHHHHHHHHHHcCC
Q 001847 185 KGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ 264 (1005)
Q Consensus 185 ~~L~~~~~~l~~ile~~~~~i~i~D~~~~dg~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~ 264 (1005)
.........|+.++++++++|+++|..+.+|+|+|+|++|++++||+.+|++|+++..+.+++........++..+..+.
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~g~i~~~N~a~~~~~G~~~~e~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~ 102 (540)
T PRK13557 23 DVSDHRSDIFFAAVETTRMPMIVTDPNQPDNPIVFANRAFLEMTGYAAEEIIGNNCRFLQGPETDRATVAEVRDAIAERR 102 (540)
T ss_pred hhhhhhhHHHHHHHHhCcCcEEEEcCCCCCCCEEEEcHHHHHHhCCCHHHhcCCChHhhcCCCCCHHHHHHHHHHHHcCC
Confidence 33446678999999999999999998777899999999999999999999999999988888777777888888898888
Q ss_pred cEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhh
Q 001847 265 SYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 317 (1005)
Q Consensus 265 ~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~v~~~v~~~~DITerk~~E~~L~ 317 (1005)
.+..+++.++++|+.+|+.+++.|+.+.+|.+++++++.+|||+++++++++.
T Consensus 103 ~~~~~~~~~~~~G~~~~~~~~~~~i~~~~g~~~~~~~~~~dit~~~~~e~~l~ 155 (540)
T PRK13557 103 EIATEILNYRKDGSSFWNALFVSPVYNDAGDLVYFFGSQLDVSRRRDAEDALR 155 (540)
T ss_pred CceEEEEEEeCCCCEEEEEEEEEEeECCCCCEEEEEEEecChHHHHHHHHHHH
Confidence 88888888999999999999999999999999999999999999999987765
No 454
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.39 E-value=2.7e-13 Score=155.46 Aligned_cols=263 Identities=22% Similarity=0.214 Sum_probs=197.8
Q ss_pred ccCCccccccccc--cCcEEEEEEEE--cCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeC
Q 001847 670 NLQHFRPIKPLGS--GDTGSVHLVEL--CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTK 744 (1005)
Q Consensus 670 ~~~~y~~~~~LG~--G~~g~Vy~a~~--~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~ 744 (1005)
....+.+.+.+|. |.+|.||.+.. ..++..+|+|.-+.... .+.....-.+++.-...+ .|++.++.+..+...
T Consensus 112 ~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s-~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~ 190 (524)
T KOG0601|consen 112 FDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFS-PPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGS 190 (524)
T ss_pred hhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCC-CccccccccchhhcccccCccccccccCcccccC
Confidence 3456788899999 99999999998 88899999997554322 222233344555555555 589999988899999
Q ss_pred CeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHH----HHHHHHHcCcccCCCCCCcEEEecC-CcEEEEecc
Q 001847 745 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVV----ALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFD 819 (1005)
Q Consensus 745 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~----aL~~LH~~gIvHrDLkP~NILi~~~-g~vkL~DFG 819 (1005)
+..++-+|++ +.+|..+... ....+++..++..+.+... ||.++|+.+++|-|+||.||++..+ ..++++|||
T Consensus 191 ~~lfiqtE~~-~~sl~~~~~~-~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~ 268 (524)
T KOG0601|consen 191 GILFIQTELC-GESLQSYCHT-PCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFG 268 (524)
T ss_pred Ccceeeeccc-cchhHHhhhc-ccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCcc
Confidence 9999999999 7888777653 2445889999999999999 9999999999999999999999999 889999999
Q ss_pred CCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCC
Q 001847 820 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYT 899 (1005)
Q Consensus 820 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~ 899 (1005)
+...++...... .........|...|++||.+.+. ++...|||+||.++.+-.+|..
T Consensus 269 ~v~~i~~~~~~~----------------------~~~~~~r~~~~~~Y~~ke~~~~l-~~~~~di~sl~ev~l~~~l~~~ 325 (524)
T KOG0601|consen 269 LVSKISDGNFSS----------------------VFKVSKRPEGDCIYAAKELLNGL-ATFASDIFSLGEVILEAILGSH 325 (524)
T ss_pred eeEEccCCcccc----------------------ceeeeecCCCCceEeChhhhccc-cchHhhhcchhhhhHhhHhhcc
Confidence 987665433211 11111223577889999987554 6789999999999999988776
Q ss_pred CCCCC--ChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCCCCC
Q 001847 900 PFRGK--TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 965 (1005)
Q Consensus 900 Pf~~~--~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~ 965 (1005)
++... .....+..+ .++.......+..+...+..|+..+|-.|++ ++.++.|+++..-.
T Consensus 326 ~~~~g~~~~W~~~r~~---~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~----~q~~~~l~~i~s~~ 386 (524)
T KOG0601|consen 326 LPSVGKNSSWSQLRQG---YIPLEFCEGGSSSLRSVTSQMLDEDPRLRLT----AQILTALNVIHSKL 386 (524)
T ss_pred cccCCCCCCccccccc---cCchhhhcCcchhhhhHHHHhcCcchhhhhH----HHHHhccccccchh
Confidence 66443 222222211 1222222334566777999999999999999 99999999998643
No 455
>PRK11091 aerobic respiration control sensor protein ArcB; Provisional
Probab=99.37 E-value=1.7e-12 Score=164.29 Aligned_cols=141 Identities=13% Similarity=0.126 Sum_probs=128.6
Q ss_pred cccccccccccccccchHHHHHHHHHhcCCeEEEEeCCCCCCcEEEccHHHHHHcCCChhhhcCCCCCcCCCCCCChHHH
Q 001847 174 SGEMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDV 253 (1005)
Q Consensus 174 ~~dit~~~~~e~~L~~~~~~l~~ile~~~~~i~i~D~~~~dg~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~ 253 (1005)
..+|+++++++++++++++.++.++++++++|+++|. +|+|+++|++|++++||+.++++|+++..++++.......
T Consensus 137 ~~~i~~r~~~~~~l~~~~~~l~~il~~~~~~i~~~D~---~g~i~~~N~a~~~l~G~~~~eliG~~~~~l~~~~~~~~~~ 213 (779)
T PRK11091 137 KNEIKEREETQIELEQQSSLLRSFLDASPDLVYYRNE---DGEFSGCNRAMELLTGKSEKQLIGLTPKDVYSPEAAEKVI 213 (779)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCcceEEEECC---CCcEEeEcHHHHHHhCcCHHHHcCCChHHhCCHHHHHHHH
Confidence 4788999999999999999999999999999999998 7889999999999999999999999988887776655566
Q ss_pred HHHHHHHHcCCcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhh
Q 001847 254 AKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 317 (1005)
Q Consensus 254 ~~i~~~l~~g~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~v~~~v~~~~DITerk~~E~~L~ 317 (1005)
......+..+..+..+.+..++||..+|+.++..|+++.+|.+.|++++++|||++|+++++++
T Consensus 214 ~~~~~~~~~~~~~~~e~~~~~~~G~~~~~~~~~~pi~~~~g~~~g~v~~~~DITe~k~~e~~l~ 277 (779)
T PRK11091 214 ETDEKVFRHNVSLTYEQWLDYPDGRKACFELRKVPFYDRVGKRHGLMGFGRDITERKRYQDALE 277 (779)
T ss_pred HHHHHHHhcCCCeEEEEEEEcCCCCEEEEEEEeeeEEcCCCCEEEEEEEEeehhHHHHHHHHHH
Confidence 6667777888888889998999999999999999999999999999999999999999998876
No 456
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.34 E-value=3.6e-12 Score=148.72 Aligned_cols=185 Identities=22% Similarity=0.314 Sum_probs=120.0
Q ss_pred CCCCchhhhccCCcccCCCCCCCCCCchhhHHhhccc--ccccc--cCCccccccccccCcEEEEEEEEcCCCeEEEEEE
Q 001847 629 ANLTPEDLWANHSKVVHPKPHRKDSPPWKAIQKILDS--GEQIN--LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKA 704 (1005)
Q Consensus 629 ~~~~p~~~~an~s~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~--~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~ 704 (1005)
..+-|+++...-+++....|+.. +....+++.. |.++. ...|. .+.||.|++|+||+|.. .+|+.||||+
T Consensus 75 ~dllp~~~~~~L~~Lqd~v~p~~----~~~~~~~l~~elg~~~~~~F~~fd-~~plasaSigQVh~A~l-~~G~~VaVKv 148 (437)
T TIGR01982 75 ADLLPADIAEELSLLQDRVPPFD----FKVARKVIEAALGGPLEELFAEFE-EKPLAAASIAQVHRARL-VDGKEVAVKV 148 (437)
T ss_pred cccCCHHHHHHHHHHhcCCCCCC----HHHHHHHHHHHhCcCHHHHHhhCC-CcceeeeehhheEEEEe-cCCCEEEEEe
Confidence 34557778888888777776443 4433333332 12221 12333 36799999999999997 5789999999
Q ss_pred eecccccChH---------------------------H----------HHHHHHHHHHHHhC----C-CCCc--ceEEEE
Q 001847 705 MDKGVMLNRN---------------------------K----------VHRACAEREILDML----D-HPFV--PALYAS 740 (1005)
Q Consensus 705 ~~~~~~~~~~---------------------------~----------~~~~~~E~~il~~l----~-hpnI--v~l~~~ 740 (1005)
.+++....-. . .-++.+|+..+.++ . +++| ++++.
T Consensus 149 ~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~- 227 (437)
T TIGR01982 149 LRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRREAANASELGENFKNDPGVYVPEVYW- 227 (437)
T ss_pred eCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHhcCCCCCEEeCCEeh-
Confidence 8764211000 0 00233455555444 2 3433 33332
Q ss_pred EEeCCeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHH-HHHHHHHcCcccCCCCCCcEEEecCCcEEEEecc
Q 001847 741 FQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVV-ALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFD 819 (1005)
Q Consensus 741 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~-aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG 819 (1005)
......++||||++|++|.++......+ .+ ...++.+++. .+..+|..|++|+|+||.||+++.+|.++|+|||
T Consensus 228 -~~~~~~vLvmE~i~G~~L~~~~~~~~~~-~~---~~~ia~~~~~~~l~ql~~~g~~H~D~hPgNilv~~~g~i~liDfG 302 (437)
T TIGR01982 228 -DRTSERVLTMEWIDGIPLSDIAALDEAG-LD---RKALAENLARSFLNQVLRDGFFHADLHPGNIFVLKDGKIIALDFG 302 (437)
T ss_pred -hhcCCceEEEEeECCcccccHHHHHhcC-CC---HHHHHHHHHHHHHHHHHhCCceeCCCCcccEEECCCCcEEEEeCC
Confidence 2234568999999999998876532111 22 3445666665 4788999999999999999999999999999999
Q ss_pred CCcccC
Q 001847 820 LSCLTS 825 (1005)
Q Consensus 820 ~a~~~~ 825 (1005)
++...+
T Consensus 303 ~~~~l~ 308 (437)
T TIGR01982 303 IVGRLS 308 (437)
T ss_pred CeeECC
Confidence 986553
No 457
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.31 E-value=1.3e-12 Score=154.02 Aligned_cols=209 Identities=16% Similarity=0.190 Sum_probs=125.0
Q ss_pred hhHHHHHHHHHHHhhhhhhhhccCCCCCCCchhhhccCCcccCCCCCCCCCCchhhHHhhcccccccccCCccccccccc
Q 001847 603 ATAEESEKLVKQTAENVNEAVKELPDANLTPEDLWANHSKVVHPKPHRKDSPPWKAIQKILDSGEQINLQHFRPIKPLGS 682 (1005)
Q Consensus 603 ~~~~e~~~l~~~~~~~v~~~v~~l~~~~~~p~~~~an~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~y~~~~~LG~ 682 (1005)
.+++++.-..-++-+.++.. ..+-|+++...-+++....|+.........+..-++....-....|.. +.||+
T Consensus 57 ~aLe~LGp~fIKlGQ~LStR------~DllP~~~~~eL~~Lqd~vpp~~~~~~~~~ie~elG~~~~~~F~~fd~-~Plas 129 (537)
T PRK04750 57 LALEELGPIFVKFGQMLSTR------RDLFPPDIADELALLQDRVPPFDGALARAIIEKALGGPVEEWFDDFDI-KPLAS 129 (537)
T ss_pred HHHHHcCcHHHHHHHHHHcC------cccCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhCCCHHHHHHhcCh-hhhcC
Confidence 34555554444444444422 445577777777777776664332222222222222111111356777 89999
Q ss_pred cCcEEEEEEEEcCCCeEEEEEEeecccccC---------------------------h----HHHH------HHHHHHHH
Q 001847 683 GDTGSVHLVELCGSGQYFAMKAMDKGVMLN---------------------------R----NKVH------RACAEREI 725 (1005)
Q Consensus 683 G~~g~Vy~a~~~~~~~~valK~~~~~~~~~---------------------------~----~~~~------~~~~E~~i 725 (1005)
|++|+||+|..+.+|+.||||+.+++.... . +... ++.+|+..
T Consensus 130 aSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~~Ea~N 209 (537)
T PRK04750 130 ASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLMREAAN 209 (537)
T ss_pred CCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHHHHHHH
Confidence 999999999998889999999998652110 0 0011 12234444
Q ss_pred HHhC----CCCCcceEEEEEE-eCCeEEEEEeccCCCchhhHHhhCCCC----CCCHHHHHHHHHHHHHHHHHHHHcCcc
Q 001847 726 LDML----DHPFVPALYASFQ-TKTHVCLITDYCPGGELFLLLDRQPTK----VLKEDAVRFYAAEVVVALEYLHCQGII 796 (1005)
Q Consensus 726 l~~l----~hpnIv~l~~~~~-~~~~~~lV~E~~~ggsL~~~l~~~~~~----~l~~~~i~~i~~qil~aL~~LH~~gIv 796 (1005)
+.++ .+...+.+-.+|. .....++||||+.|+.+.++..-...+ .+....+..++.|+ +..|++
T Consensus 210 ~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi-------f~~Gff 282 (537)
T PRK04750 210 ASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV-------FRDGFF 282 (537)
T ss_pred HHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH-------HhCCee
Confidence 4443 2333333323332 245678999999999998753211111 23334444444444 458999
Q ss_pred cCCCCCCcEEEecCC----cEEEEeccCCcccC
Q 001847 797 YRDLKPENVLLQGNG----HVSLTDFDLSCLTS 825 (1005)
Q Consensus 797 HrDLkP~NILi~~~g----~vkL~DFG~a~~~~ 825 (1005)
|+|+||.||+++.+| .++++|||++...+
T Consensus 283 HaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 283 HADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred eCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 999999999999888 99999999986553
No 458
>PRK13558 bacterio-opsin activator; Provisional
Probab=99.27 E-value=5.8e-11 Score=147.74 Aligned_cols=128 Identities=39% Similarity=0.741 Sum_probs=115.2
Q ss_pred HHHHHHHHHhcCCeEEEEeCCCCCCcEEEccHHHHHHcCCChhhhcCCCCCcCCCCCCChHHHHHHHHHHHcCCcEEEEE
Q 001847 191 SDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRL 270 (1005)
Q Consensus 191 ~~~l~~ile~~~~~i~i~D~~~~dg~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~ 270 (1005)
..+++.+++++++++++.|..+.+|+|+++|++|++++||+.++++|+++..+.++.........+...+..+..+..++
T Consensus 147 ~r~~~~~~~~~~~gi~~~d~~~~dg~i~~~N~~~~~l~G~~~eel~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~ 226 (665)
T PRK13558 147 RRLKERALDEAPVGITIADATLPDEPLIYINDAFERITGYSPDEVLGRNCRFLQGEDTNEERVAELREAIDEERPTSVEL 226 (665)
T ss_pred hHHHHHHHhcCCccEEEEcCCCCCCcEEEEcHHHHHHhCcCHHHHcCCCHHHhcCCCccHHHHHHHHHHHhcCCCeEEEE
Confidence 34567899999999999986666889999999999999999999999998877777766666677788888888889999
Q ss_pred EEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhhc
Q 001847 271 LNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKML 318 (1005)
Q Consensus 271 ~~~~kdG~~~wv~~~~~pi~d~~G~v~~~v~~~~DITerk~~E~~L~~ 318 (1005)
+.+++||..+|+.++..|+.+.+|.+.+++++++|||++|++|++++.
T Consensus 227 ~~~~~dG~~~~~~~~~~pi~d~~G~~~~~vgi~~DITerk~~E~~L~~ 274 (665)
T PRK13558 227 RNYRKDGSTFWNQVDIAPIRDEDGTVTHYVGFQTDVTERKEAELALQR 274 (665)
T ss_pred EEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEeCcHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998874
No 459
>TIGR02040 PpsR-CrtJ transcriptional regulator PpsR. This model represents the transcriptional regulator PpsR which is strictly associated with photosynthetic proteobacteria and found in photosynthetic operons. PpsR has been reported to be a repressor. These proteins contain a Helix-Turn_Helix motif of the "fis" type (pfam02954).
Probab=99.26 E-value=6.7e-12 Score=148.23 Aligned_cols=255 Identities=9% Similarity=-0.007 Sum_probs=163.2
Q ss_pred ccccccccccccc-----------cc---cccchHHHHHHHHHhcCCeEEEEeCCCCCCcEEEccHHHHHHcCCChhhhc
Q 001847 171 VRSSGEMSDEGGK-----------EK---GLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVV 236 (1005)
Q Consensus 171 ~~~~~dit~~~~~-----------e~---~L~~~~~~l~~ile~~~~~i~i~D~~~~dg~I~~vN~a~~~l~Gys~eEll 236 (1005)
+...+|||++++. |+ +|+++++.|+.++++++++|+++|.. +|+|+++|++|++++||+.+|++
T Consensus 98 ~~i~rDi~~~~~~~~~l~~~~~~~e~~~~~l~~~e~r~~~l~e~~~~~i~~~d~~--~g~i~~~N~a~~~l~G~~~~el~ 175 (442)
T TIGR02040 98 LALGRDLRAVAELQQQLVAAQQAMERDYWTLREMETRYRVVLEVSSDAVLLVDMS--TGRIVEANSAAAALLGGVGQSLV 175 (442)
T ss_pred EEEecccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEEECC--CCEEEEEcHHHHHHhCcCHHHHc
Confidence 3445888765543 22 66777889999999999999999962 56799999999999999999999
Q ss_pred CCCCCcCCCCCCChHHHHHHHHHHHcCCcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHh
Q 001847 237 GRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDK 316 (1005)
Q Consensus 237 G~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~v~~~v~~~~DITerk~~E~~L 316 (1005)
|+++..++++.........+......+.....++. .++|...| .+.++++.. +|. ..+++.++|||+++++++++
T Consensus 176 g~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~--~~~~~~~~-~~~~~~~~~-~~~-~~~l~~~~dit~~~~~e~~~ 250 (442)
T TIGR02040 176 GRAFPQEFEGRRREELMLTLRNVRATGSAAPVRIL--LRRSQKRL-LVVVSVFRQ-DGE-SLFLCQLSPAGATQPVGDEL 250 (442)
T ss_pred CCCHHHhCCHHHHHHHHHHHHHHHhcCCCcceEEE--EcCCCeEE-EEEEEEEEe-CCc-eEEEEEEcccchhhhhhHHH
Confidence 99988777776666566667777777765555544 33443344 445666654 333 35778899999998877553
Q ss_pred hcCCCCCchhhhhHHHHHHHHhhhhHHHHHHHccCCCCcccCCCCCcccccCCCCchhh-hcccccCCCCCCCCCCCCCC
Q 001847 317 MLRPNGLPESLIRYDARQKEMATSSVTELVQAMKKPRSLSESTNRPPIIRKSEGGVEEE-RAGALGRRKSENVPPPRRNS 395 (1005)
Q Consensus 317 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~ 395 (1005)
.. .. ..-+..+-....-.+..-....+|..+...+|++ .+++.|++...+++......
T Consensus 251 ~~--------------~~-------~~l~e~~~d~I~v~D~~G~I~~~N~a~~~l~G~~~~~~l~G~~~~~~~~~~~~~~ 309 (442)
T TIGR02040 251 SE--------------NL-------ARLYHEAPDAIVFSDADGTIRGANEAFLELTDSSSLEAVRGRTLDRWLGRGGVDL 309 (442)
T ss_pred HH--------------HH-------HHHHHhCCceEEEEcCCCcEEehhHHHHHHhCCCChHHHcCCCHHHHhCCCcccH
Confidence 30 00 1111222223333444455667888889999997 47799998877654321110
Q ss_pred C-CCCcccccccccccchhhccccCCcccccccccccccCCCCCCccccccccCCCCCCCCCCCCCchhhHHHH
Q 001847 396 Y-GGGCRTSMQRISEVPEKKKQKSGRRSFMGLIGRKSQSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQ 468 (1005)
Q Consensus 396 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~er~~~e 468 (1005)
. .............+......++|+.+|+.++..+....++.. .+. ..+|+|+|++.+
T Consensus 310 ~~~~~~~~~~g~~~~~~~~~~~~~G~~~~ve~s~~~i~~~~~~~-~~~--------------v~rDITeR~~~~ 368 (442)
T TIGR02040 310 RVLLSNVRRTGQVRLYATTLTGEFGAQTEVEISAAWVDQGERPL-IVL--------------VIRDISRRLTMR 368 (442)
T ss_pred HHHHHHHhhcCceEEEEEEEEcCCCCEEEEEEEEEEeccCCceE-EEE--------------EEecchhhccCC
Confidence 0 000000011122234445688999999999988877644422 222 247788877664
No 460
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.26 E-value=6.3e-12 Score=132.77 Aligned_cols=210 Identities=21% Similarity=0.254 Sum_probs=146.5
Q ss_pred HHHhCCCCCcceEEEEEEeC-----CeEEEEEeccCCCchhhHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHc--Cc
Q 001847 725 ILDMLDHPFVPALYASFQTK-----THVCLITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQ--GI 795 (1005)
Q Consensus 725 il~~l~hpnIv~l~~~~~~~-----~~~~lV~E~~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qil~aL~~LH~~--gI 795 (1005)
-+-++-|.|+|+++.|+.+. ..+.++.|||..|+|..+|++- -...+.....++|+.||+.||.|||+. -|
T Consensus 120 nllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Ppi 199 (458)
T KOG1266|consen 120 NLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPI 199 (458)
T ss_pred HHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCcc
Confidence 45556799999999988654 3578999999999999999742 124588888999999999999999998 49
Q ss_pred ccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC
Q 001847 796 IYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG 875 (1005)
Q Consensus 796 vHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~ 875 (1005)
+|+++..+-|++..+|-+|+.--.-... .+.... ..........+-++|.+||.=..
T Consensus 200 ihgnlTc~tifiq~ngLIkig~~ap~s~---h~s~~~--------------------~~~~Ek~~~~~~~g~~a~~sg~~ 256 (458)
T KOG1266|consen 200 IHGNLTCDTIFIQHNGLIKIGSVAPDST---HPSVNS--------------------TREAEKSVNTSLPGFSAPESGTT 256 (458)
T ss_pred ccCCcchhheeecCCceEEecccCcccc---chhhhh--------------------hhHhhhhccccCCccccCCcCcc
Confidence 9999999999999998888753332211 100000 00011122346789999997655
Q ss_pred CCCCChhhHHHHHHHHHHHHcCCCCCCCCCh-HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHH
Q 001847 876 AGHTSAVDWWALGILLYEMLYGYTPFRGKTR-QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 954 (1005)
Q Consensus 876 ~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~-~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~e 954 (1005)
...+.++|||+||...++|..+..--..... ...-..+..- +. ....+ .-.+++.+||...|+.||+ ++.
T Consensus 257 tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~-i~-~len~---lqr~~i~kcl~~eP~~rp~----ar~ 327 (458)
T KOG1266|consen 257 TNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANV-II-GLENG---LQRGSITKCLEGEPNGRPD----ARL 327 (458)
T ss_pred cccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhh-ee-eccCc---cccCcCcccccCCCCCCcc----hhh
Confidence 5666799999999999999887654322221 1111112111 11 11111 1246899999999999999 999
Q ss_pred HHcCCCCCCCCh
Q 001847 955 IKKHPFFKGVNW 966 (1005)
Q Consensus 955 lL~hpff~~~~~ 966 (1005)
+|.||-+-.+.-
T Consensus 328 llfHpllfeVhs 339 (458)
T KOG1266|consen 328 LLFHPLLFEVHS 339 (458)
T ss_pred hhcCceeeecch
Confidence 999998877543
No 461
>PRK10060 RNase II stability modulator; Provisional
Probab=99.26 E-value=5.1e-11 Score=147.32 Aligned_cols=158 Identities=13% Similarity=0.134 Sum_probs=121.8
Q ss_pred ccccccccccccchHHHHHHHHHhcCCeEEEEeCCCCCCcEEEccHHHHHHcCCChhhhcCCCCCcC-CCCCCChHHHHH
Q 001847 177 MSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFL-QGAGTDPEDVAK 255 (1005)
Q Consensus 177 it~~~~~e~~L~~~~~~l~~ile~~~~~i~i~D~~~~dg~I~~vN~a~~~l~Gys~eEllG~~~~~l-~~~~~~~~~~~~ 255 (1005)
+++.....+.+.....+++.+++.++++|+++|. +|+|+++|++|++++||+.+|++|+++..+ .++.........
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~v~~~~~~gI~i~D~---~g~I~~~N~a~~~l~Gy~~~eliG~~~~~l~~~~~~~~~~~~~ 172 (663)
T PRK10060 96 WHDTPSVARDLSHGLSFAEQVVSEANSVIVILDS---RGNIQRFNRLCEEYTGLKEHDVIGQSVFKLFMSRREAAASRRN 172 (663)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCceEEEEeC---CCCEEEEcHHHHHHHCcCHHHHcCCCHHHHhCChhhHHHHHHH
Confidence 3333444455667778889999999999999999 778999999999999999999999997644 344444555666
Q ss_pred HHHHHHcCCcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhhcC-----CCCCchhhhhH
Q 001847 256 IRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLR-----PNGLPESLIRY 330 (1005)
Q Consensus 256 i~~~l~~g~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~v~~~v~~~~DITerk~~E~~L~~~-----~~~l~~~l~~~ 330 (1005)
+...+..+..|.++.+..+++|..+|+.....+..+.++...+++++.+|||++|+++++++.. +++|++|-...
T Consensus 173 ~~~~~~~~~~~~~e~~~~~~~G~~~~~~~~~~~~~~~g~~~~~~i~~~~DITe~k~~e~~l~~~a~~D~LTGL~NR~~f~ 252 (663)
T PRK10060 173 IRGFFRSGNAYEVERWIKTRKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAIQ 252 (663)
T ss_pred HHHHHhcCCceEEEEEEEeCCCCEEEEEeeeEEEcCCCCceEEEEEEEEechHHHHHHHHHHHHhhcCccCCCcCHHHHH
Confidence 7777888888999999999999999987665443333334567889999999999999887653 67788876555
Q ss_pred HHHHHHH
Q 001847 331 DARQKEM 337 (1005)
Q Consensus 331 ~~~~~~~ 337 (1005)
+.....+
T Consensus 253 ~~l~~~l 259 (663)
T PRK10060 253 ELIDHAI 259 (663)
T ss_pred HHHHHHH
Confidence 5554433
No 462
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.23 E-value=9e-11 Score=115.47 Aligned_cols=146 Identities=19% Similarity=0.211 Sum_probs=113.6
Q ss_pred ccccccccCcEEEEEEEEcCCCeEEEEEEe-----ecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001847 676 PIKPLGSGDTGSVHLVELCGSGQYFAMKAM-----DKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 750 (1005)
Q Consensus 676 ~~~~LG~G~~g~Vy~a~~~~~~~~valK~~-----~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 750 (1005)
.+..|.+|+-+.|+++.+ .|+.++||.- +...+..+-...+..+|+.+|.++.--.|.-..-+|.+...-+|+
T Consensus 11 ~l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ 88 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIY 88 (229)
T ss_pred cceeeeccceeeEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEE
Confidence 567889999999999997 7888888743 333344455567778899999998655665555566666777899
Q ss_pred EeccCC-CchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCC---cEEEEeccCCcc
Q 001847 751 TDYCPG-GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG---HVSLTDFDLSCL 823 (1005)
Q Consensus 751 ~E~~~g-gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g---~vkL~DFG~a~~ 823 (1005)
|||++| .++.+++...-...........++++|-..+.-||.++|||+||..+||++.++| .+.|+|||++..
T Consensus 89 ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 89 MEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence 999966 5888888764334344555578999999999999999999999999999998765 358999999843
No 463
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.22 E-value=2.1e-10 Score=118.15 Aligned_cols=140 Identities=15% Similarity=0.122 Sum_probs=101.8
Q ss_pred cccccccCcEEEEEEEEcC------CCeEEEEEEeeccccc-------------------ChHHHHHHH----HHHHHHH
Q 001847 677 IKPLGSGDTGSVHLVELCG------SGQYFAMKAMDKGVML-------------------NRNKVHRAC----AEREILD 727 (1005)
Q Consensus 677 ~~~LG~G~~g~Vy~a~~~~------~~~~valK~~~~~~~~-------------------~~~~~~~~~----~E~~il~ 727 (1005)
...||.|--+.||.|.... .+..+|||+++-.... .......+. +|+..|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 3578999999999998643 3579999988642110 011122333 7888999
Q ss_pred hCCC--CCcceEEEEEEeCCeEEEEEeccCCCchhh-HHhhCCCCCCCHHHHHHHHHHHHHHHHHH-HHcCcccCCCCCC
Q 001847 728 MLDH--PFVPALYASFQTKTHVCLITDYCPGGELFL-LLDRQPTKVLKEDAVRFYAAEVVVALEYL-HCQGIIYRDLKPE 803 (1005)
Q Consensus 728 ~l~h--pnIv~l~~~~~~~~~~~lV~E~~~ggsL~~-~l~~~~~~~l~~~~i~~i~~qil~aL~~L-H~~gIvHrDLkP~ 803 (1005)
++.. -+++.++.+ ..-+|||||+.++.+.. .++. ..++......++.+++.+|..| |+.||||+||+|.
T Consensus 82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd---~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~ 154 (197)
T cd05146 82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD---AKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEY 154 (197)
T ss_pred HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc---cccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHH
Confidence 8843 567777764 44679999996654422 2221 2355667778889999999999 8999999999999
Q ss_pred cEEEecCCcEEEEeccCCccc
Q 001847 804 NVLLQGNGHVSLTDFDLSCLT 824 (1005)
Q Consensus 804 NILi~~~g~vkL~DFG~a~~~ 824 (1005)
|||+. ++.+.|+|||.+...
T Consensus 155 NIL~~-~~~v~iIDF~qav~~ 174 (197)
T cd05146 155 NMLWH-DGKVWFIDVSQSVEP 174 (197)
T ss_pred HEEEE-CCcEEEEECCCceeC
Confidence 99997 578999999988544
No 464
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.21 E-value=6e-11 Score=120.56 Aligned_cols=127 Identities=24% Similarity=0.291 Sum_probs=95.8
Q ss_pred cccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCC-cceEEEEEEeCCeEEEEEeccC
Q 001847 677 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPF-VPALYASFQTKTHVCLITDYCP 755 (1005)
Q Consensus 677 ~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpn-Iv~l~~~~~~~~~~~lV~E~~~ 755 (1005)
++.|+.|.++.||++.. .+..|++|....... ....+..|+.+++.+.+.+ +++++.+.. ...++||||++
T Consensus 3 ~~~l~~G~~~~vy~~~~--~~~~~~lK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~ 74 (170)
T cd05151 3 ISPLKGGMTNKNYRVEV--ANKKYVVRIPGNGTE----LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIE 74 (170)
T ss_pred eeecCCcccCceEEEEE--CCeEEEEEeCCCCcc----cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecC
Confidence 46789999999999997 478899998765421 1224567888888885443 456665543 23479999999
Q ss_pred CCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc-----ccCCCCCCcEEEecCCcEEEEeccCCc
Q 001847 756 GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGI-----IYRDLKPENVLLQGNGHVSLTDFDLSC 822 (1005)
Q Consensus 756 ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gI-----vHrDLkP~NILi~~~g~vkL~DFG~a~ 822 (1005)
|.++.... . ....++.+++.+|+.||..++ +|+|++|+||+++ ++.++++|||.+.
T Consensus 75 G~~l~~~~-------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 75 GSELLTED-------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred CCcccccc-------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 98876430 1 113456899999999999985 9999999999999 6789999999884
No 465
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.20 E-value=1.8e-10 Score=133.39 Aligned_cols=240 Identities=17% Similarity=0.160 Sum_probs=155.5
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001847 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (1005)
Q Consensus 673 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 752 (1005)
.|.+ ....-++.+..-.+.-+.++.++.+..++... ........+-++-|+.++||||+++++.++..+.+|||+|
T Consensus 14 pY~l-e~~~~~~~a~~~~~t~k~~~~~vsVF~~~~~~---~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTE 89 (690)
T KOG1243|consen 14 PYDL-EETAFSSEALWPDGTRKADGGPVSVFVYKRSN---GEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTE 89 (690)
T ss_pred Cccc-ccccCCCcccccccceeccCCceEEEEEeCCC---chhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEee
Confidence 3555 33333333322234555678888888877542 2345566677888999999999999999999999999999
Q ss_pred ccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH-HcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001847 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH-CQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (1005)
Q Consensus 753 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH-~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 831 (1005)
.+ ..|..+++. +....+..-+.||+.||.||| +++++|++|.-+.|+|+..|.-||++|.++........
T Consensus 90 rV--~Pl~~~lk~-----l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~-- 160 (690)
T KOG1243|consen 90 RV--RPLETVLKE-----LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA-- 160 (690)
T ss_pred cc--ccHHHHHHH-----hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc--
Confidence 98 456666665 345667777899999999998 66999999999999999999999999998744321110
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001847 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 911 (1005)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~~~~~~~~~~ 911 (1005)
.......--.|..|+.+.... -..|.|.|||++++++.|..+- ......
T Consensus 161 -------------------------~~~~~~~~~s~~~P~~~~~s~--~s~D~~~Lg~li~el~ng~~~~--~~~~~~-- 209 (690)
T KOG1243|consen 161 -------------------------PAKSLYLIESFDDPEEIDPSE--WSIDSWGLGCLIEELFNGSLLT--KTDLSN-- 209 (690)
T ss_pred -------------------------ccccchhhhcccChhhcCccc--cchhhhhHHHHHHHHhCcccCc--chhhhc--
Confidence 001111222356665443222 3469999999999999983322 111000
Q ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHc-CCCCCCCChh
Q 001847 912 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK-HPFFKGVNWA 967 (1005)
Q Consensus 912 ~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~-hpff~~~~~~ 967 (1005)
.+ .++.....+..+-+.-.+..||.....+..++. |+||++--..
T Consensus 210 ---~~--------~ipk~~~~~~~k~~~~~~~~r~n~~~~~~~~~~~~gff~n~fvd 255 (690)
T KOG1243|consen 210 ---TG--------KIPKALIELYCKKLGATELKRPNKLRFILECRLLGGFFRNDFVD 255 (690)
T ss_pred ---cC--------ccchhHHHHHHHHhccccccccchhhHHHHHHhccccccchHHH
Confidence 00 112223334444444555666663344555554 8888874443
No 466
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.20 E-value=9.9e-12 Score=142.74 Aligned_cols=253 Identities=21% Similarity=0.266 Sum_probs=185.6
Q ss_pred ccccCCccccccccccCcEEEEEEEEc-CCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCC
Q 001847 668 QINLQHFRPIKPLGSGDTGSVHLVELC-GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKT 745 (1005)
Q Consensus 668 ~i~~~~y~~~~~LG~G~~g~Vy~a~~~-~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~ 745 (1005)
.....+|..+..||.|.|+.|+.+.-. .++..|++|.+............. ..|..+...+ .|.+++.++..+....
T Consensus 261 s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~s-l~ev~l~~~l~~~~~~~g~~~~W~~~r 339 (524)
T KOG0601|consen 261 SCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFS-LGEVILEAILGSHLPSVGKNSSWSQLR 339 (524)
T ss_pred eeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcc-hhhhhHhhHhhcccccCCCCCCccccc
Confidence 455678999999999999999998765 678899999888765444443332 3355555555 6889998888888888
Q ss_pred eEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecC-CcEEEEeccCCccc
Q 001847 746 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDLSCLT 824 (1005)
Q Consensus 746 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~-g~vkL~DFG~a~~~ 824 (1005)
..|+-.|||.++++...... ...+.+...+.+..|++.++.++|++.++|+|+||+||++..+ +..+++|||....+
T Consensus 340 ~~~ip~e~~~~~s~~l~~~~--~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~ 417 (524)
T KOG0601|consen 340 QGYIPLEFCEGGSSSLRSVT--SQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRL 417 (524)
T ss_pred cccCchhhhcCcchhhhhHH--HHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhcccccccccc
Confidence 88899999999888766532 2347788899999999999999999999999999999999976 78899999987432
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCccc--ccccccCCCCCChhhHHHHHHHHHHHHcCCCCCC
Q 001847 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYI--APEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 902 (1005)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~--aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf~ 902 (1005)
.... ....+..+++ ++..+....+..+.|++|||..+++.++|...-.
T Consensus 418 ~~~~------------------------------~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~ 467 (524)
T KOG0601|consen 418 AFSS------------------------------GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSE 467 (524)
T ss_pred ceec------------------------------ccccccccccccchhhccccccccccccccccccccccccCcccCc
Confidence 1111 1112333444 4444455677889999999999999999875443
Q ss_pred CCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCccCCChhcHHHHHcCCCCC
Q 001847 903 GKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 962 (1005)
Q Consensus 903 ~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~hpff~ 962 (1005)
.... ...+..+.. +........++.+.+.++..++..|+. +.++..|.-|.
T Consensus 468 ~~~~---~~~i~~~~~--p~~~~~~~~~q~~~kv~~~~~~~~~~l----~~~l~~~~~~~ 518 (524)
T KOG0601|consen 468 SGVQ---SLTIRSGDT--PNLPGLKLQLQVLLKVMINPDRKRRPS----AVELSLHSEFY 518 (524)
T ss_pred cccc---ceeeecccc--cCCCchHHhhhhhhhhhcCCccccchh----hhhhcccchhh
Confidence 3222 222333322 222233467888999999999999998 77777776554
No 467
>PRK13558 bacterio-opsin activator; Provisional
Probab=99.18 E-value=3e-10 Score=141.36 Aligned_cols=121 Identities=40% Similarity=0.759 Sum_probs=107.5
Q ss_pred HHHHHHhccccEEEEcCCCCCCCEEeecHHHHHHcCCChhhhcCCCCCccCCCCCCHHHHHHHHHHHhcCCcEEEEEEEE
Q 001847 477 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 556 (1005)
Q Consensus 477 l~~i~e~~~~~I~i~D~~G~d~~i~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e~~~~ 556 (1005)
++.+++.++.++++.|..+.++.|+++|+++++++||+.++++|+++..+.+++........+...+..+..+..+++.+
T Consensus 150 ~~~~~~~~~~gi~~~d~~~~dg~i~~~N~~~~~l~G~~~eel~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 229 (665)
T PRK13558 150 KERALDEAPVGITIADATLPDEPLIYINDAFERITGYSPDEVLGRNCRFLQGEDTNEERVAELREAIDEERPTSVELRNY 229 (665)
T ss_pred HHHHHhcCCccEEEEcCCCCCCcEEEEcHHHHHHhCcCHHHHcCCCHHHhcCCCccHHHHHHHHHHHhcCCCeEEEEEEE
Confidence 57789999999999986444555999999999999999999999998888877776666677778888888889999999
Q ss_pred ecCCcEEEEEEEEeeeeCCCCCEEEEEEEEecCccCccccc
Q 001847 557 TKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLR 597 (1005)
Q Consensus 557 ~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerK~~e~ 597 (1005)
++||..+|+.++..|+++.+|.+.+++++++|||++|+.++
T Consensus 230 ~~dG~~~~~~~~~~pi~d~~G~~~~~vgi~~DITerk~~E~ 270 (665)
T PRK13558 230 RKDGSTFWNQVDIAPIRDEDGTVTHYVGFQTDVTERKEAEL 270 (665)
T ss_pred CCCCCEEEEEEEEEEEECCCCCEEEEEEEEEeCcHHHHHHH
Confidence 99999999999999999999999999999999999999543
No 468
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.17 E-value=2.6e-10 Score=113.15 Aligned_cols=134 Identities=21% Similarity=0.217 Sum_probs=101.7
Q ss_pred ccccccCcEEEEEEEEcCCCeEEEEEEeecc-----cccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001847 678 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKG-----VMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (1005)
Q Consensus 678 ~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~-----~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 752 (1005)
..+++|+-+.+|.+.. -|..+++|.=.+. .+..+-...+-.+|+.++.++..-.|....=++.+.+...|+||
T Consensus 2 ~~i~~GAEa~i~~~~~--~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me 79 (204)
T COG3642 2 DLIKQGAEAIIYLTDF--LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVME 79 (204)
T ss_pred chhhCCcceeEEeeec--cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEE
Confidence 4578999999999976 4445777754332 22223334566689999999866566555555666677789999
Q ss_pred ccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcc
Q 001847 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 823 (1005)
Q Consensus 753 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~ 823 (1005)
|++|..|.+++... ...+++.+-.-+.-||..||||+||.++||++.++ .+.++|||++..
T Consensus 80 ~I~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~-~i~~IDfGLg~~ 140 (204)
T COG3642 80 YIEGELLKDALEEA---------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGG-RIYFIDFGLGEF 140 (204)
T ss_pred EeCChhHHHHHHhc---------chHHHHHHHHHHHHHHhcCeecCCCccceEEEeCC-cEEEEECCcccc
Confidence 99999999998763 14567778888899999999999999999999955 499999999853
No 469
>TIGR02938 nifL_nitrog nitrogen fixation negative regulator NifL. NifL is a modulator of the nitrogen fixation positive regulator protein NifA, and is therefore a negative regulator. It binds NifA. NifA and NifL are encoded by adjacent genes.
Probab=99.13 E-value=1.5e-10 Score=138.25 Aligned_cols=132 Identities=23% Similarity=0.418 Sum_probs=112.4
Q ss_pred HHHHHHhccccEEEEcCCCCCCCEEeecHHHHHHcCCChhhhcCCCCCccCCCCCCHHHHHHHHHHHhcCCcEEEEEEEE
Q 001847 477 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 556 (1005)
Q Consensus 477 l~~i~e~~~~~I~i~D~~G~d~~i~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e~~~~ 556 (1005)
|+.++++++++++++|.+|+ ++++|+++++++||++++++|++...+.++.........+.+.+..+..+..+....
T Consensus 6 ~~~i~~~~~~~i~~~d~~g~---~~~~N~~~~~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (494)
T TIGR02938 6 YRQTVDQAPLAISITDLKAN---ILYANDAFTRITGYTKEEIIGKNESVLSNHTTPPEVYQALWGSLAEQKPWAGKLLNR 82 (494)
T ss_pred HHHHHHhCCceEEEECCCCc---EEEEchhheeecCCCHHHHhCCCchhhcCCCCCHHHHHHHHHHHHhCCcccceeecc
Confidence 89999999999999999888 999999999999999999999987777766666667777778888888888888889
Q ss_pred ecCCcEEEEEEEEeeeeCCCCCEEEEEEEEecCccCccccccCCchhhHHHHHHHHHHHhh
Q 001847 557 TKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNSIPEATAEESEKLVKQTAE 617 (1005)
Q Consensus 557 ~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerK~~e~~~~~~~~~~e~~~l~~~~~~ 617 (1005)
+++|+.+|+..+..|+++.+|.+.+++++++|||++|+.+ +.+++.+.+++.+..
T Consensus 83 ~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~DIt~~k~~e------~~l~~~~~~~~~~~~ 137 (494)
T TIGR02938 83 RKDGELYLAELTVAPVLNEAGETTHFLGMHRDITELHRLE------QVVANQKLLIESVVD 137 (494)
T ss_pred CCCccchhhheeeEEEECCCCCEEEEEEehhhhhHHHHHH------HHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999842 233444444444443
No 470
>PRK10060 RNase II stability modulator; Provisional
Probab=99.12 E-value=7e-10 Score=137.26 Aligned_cols=115 Identities=17% Similarity=0.178 Sum_probs=95.1
Q ss_pred HHHHHHhccccEEEEcCCCCCCCEEeecHHHHHHcCCChhhhcCCCCCccC-CCCCCHHHHHHHHHHHhcCCcEEEEEEE
Q 001847 477 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQ-GPETDPATVRKIRAAIDNQTDVTVQLIN 555 (1005)
Q Consensus 477 l~~i~e~~~~~I~i~D~~G~d~~i~~vN~a~~~l~Gy~~eEllG~~~~~l~-~~~~~~~~~~~i~~~l~~~~~~~~e~~~ 555 (1005)
++.+++.++++|+++|.+|+ |+++|++|++++||+.+|++|+++..+. ++++.......+...+..+..+..|.+.
T Consensus 113 ~~~v~~~~~~gI~i~D~~g~---I~~~N~a~~~l~Gy~~~eliG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 189 (663)
T PRK10060 113 AEQVVSEANSVIVILDSRGN---IQRFNRLCEEYTGLKEHDVIGQSVFKLFMSRREAAASRRNIRGFFRSGNAYEVERWI 189 (663)
T ss_pred HHHHHhhCCceEEEEeCCCC---EEEEcHHHHHHHCcCHHHHcCCCHHHHhCChhhHHHHHHHHHHHHhcCCceEEEEEE
Confidence 67899999999999999888 9999999999999999999999975544 5554455566777778888889999999
Q ss_pred EecCCcEEEEEEEEeeeeCCCCC-EEEEEEEEecCccCccc
Q 001847 556 YTKSGKKFWNLFHLQPMRDQKGE-VQYFIGVQLDGSEHLEP 595 (1005)
Q Consensus 556 ~~kdG~~~wv~~~~~pi~d~~G~-v~~~vgi~~DITerK~~ 595 (1005)
.+++|..+|+..... +.+..|. ..+++++.+|||++|+.
T Consensus 190 ~~~~G~~~~~~~~~~-~~~~~g~~~~~~i~~~~DITe~k~~ 229 (663)
T PRK10060 190 KTRKGQRLFLFRNKF-VHSGSGKNEIFLICSGTDITEERRA 229 (663)
T ss_pred EeCCCCEEEEEeeeE-EEcCCCCceEEEEEEEEechHHHHH
Confidence 999999999876644 4444554 46788999999999884
No 471
>TIGR00229 sensory_box PAS domain S-box. The PAS domain was previously described. This sensory box, or S-box domain occupies the central portion of the PAS domain but is more widely distributed. It is often tandemly repeated. Known prosthetic groups bound in the S-box domain include heme in the oxygen sensor FixL, FAD in the redox potential sensor NifL, and a 4-hydroxycinnamyl chromophore in photoactive yellow protein. Proteins containing the domain often contain other regulatory domains such as response regulator or sensor histidine kinase domains. Other S-box proteins include phytochromes and the aryl hydrocarbon receptor nuclear translocator.
Probab=99.12 E-value=8.2e-10 Score=100.47 Aligned_cols=120 Identities=20% Similarity=0.409 Sum_probs=97.2
Q ss_pred HHHHHHHHhcCCeEEEEeCCCCCCcEEEccHHHHHHcCCChhhhcCCCCCcCCCCCCChHHHHHHHHHHHcC-CcEEEEE
Q 001847 192 DIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNG-QSYCGRL 270 (1005)
Q Consensus 192 ~~l~~ile~~~~~i~i~D~~~~dg~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g-~~~~~e~ 270 (1005)
+.++.++++++++++++|. +|+++++|+++++++|++.++++|..+..+.++.........+...+..+ .....+.
T Consensus 3 ~~~~~~~~~~~~~~~~~d~---~~~i~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (124)
T TIGR00229 3 ERYRAIFESSPDAIIVIDL---EGNILYVNPAFEEIFGYSAEELIGRNVLELIPEEDREEVRERIERLLEGEREPVSEER 79 (124)
T ss_pred hHHHHHHhhCCceEEEEcC---CCcEEEEchHHHHHhCCChHHhcCcchhhhcChhhhHHHHHHHHHHHcCCCCCcceEe
Confidence 5678899999999999998 77799999999999999999999999877666655554445555555533 2233445
Q ss_pred EEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHH
Q 001847 271 LNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKD 315 (1005)
Q Consensus 271 ~~~~kdG~~~wv~~~~~pi~d~~G~v~~~v~~~~DITerk~~E~~ 315 (1005)
....++|..+|+.....|+. .+|...++++++.|||++++++++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~dit~~~~~~~~ 123 (124)
T TIGR00229 80 RVRRKDGSEIWVEVSVSPIR-TNGGELGVVGIVRDITERKQAEEA 123 (124)
T ss_pred eeEcCCCCEEEEEEEEeehh-hCCCeeEEEEEeeehhHHHHHHhc
Confidence 55588999999999999998 788899999999999999988765
No 472
>PRK11359 cyclic-di-GMP phosphodiesterase; Provisional
Probab=99.07 E-value=6.8e-10 Score=141.34 Aligned_cols=141 Identities=14% Similarity=0.183 Sum_probs=117.4
Q ss_pred cccccccccccccccccccchHHHHHHHHHhcCCeEEEEeCCCCCCcEEEccHHHHHHcCCChhhhcCCCCCcCC-CCCC
Q 001847 170 SVRSSGEMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQ-GAGT 248 (1005)
Q Consensus 170 ~~~~~~dit~~~~~e~~L~~~~~~l~~ile~~~~~i~i~D~~~~dg~I~~vN~a~~~l~Gys~eEllG~~~~~l~-~~~~ 248 (1005)
.+....|||++++.++ ..+.+..++++++++++++|. +|+|+++|+++++++||+.++++|+++..+. ++..
T Consensus 118 ~~~~~~DiT~~~~~~~----~~~~~~~~~~~~~~~i~~~d~---~g~i~~~N~~~~~l~G~~~~e~~g~~~~~~~~~~~~ 190 (799)
T PRK11359 118 YLALVRDASVEMAQKE----QTRQLIIAVDHLDRPVIVLDP---ERRIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEF 190 (799)
T ss_pred EEEEEeeccchhhhHH----HHHHHHHHHhcCCCcEEEEcC---CCcEEEEChhhHhhhCCCHHHHCCCChHHhcCCCCC
Confidence 4555689998766544 456677889999999999998 7779999999999999999999999877544 4445
Q ss_pred ChHHHHHHHHHHHcCCcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhh
Q 001847 249 DPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 317 (1005)
Q Consensus 249 ~~~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~v~~~v~~~~DITerk~~E~~L~ 317 (1005)
.......+...+..+..+..+++..+++|..+|+.++..|+.+.+|.+.+++++.+|||++|++++..+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~e~~~~~~dG~~~~~~~~~~~v~d~~g~~~~~~~~~~DITerk~~e~~~~ 259 (799)
T PRK11359 191 PADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEG 259 (799)
T ss_pred cHHHHHHHHHhhccCCCCcceeEEeCCCCCEEEEEeeeeeeecCCCceeEEEEEeehhhhHHHHHHHHH
Confidence 555566677777777778888888999999999999999999999999999999999999998875543
No 473
>PF08447 PAS_3: PAS fold; InterPro: IPR013655 The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs []. The PAS fold appears in archaea, eubacteria and eukarya. The PAS domain contains a sensory box, or S-box domain that occupies the central portion of the PAS domain but is more widely distributed. It is often tandemly repeated. Known prosthetic groups bound in the S-box domain include haem in the oxygen sensor FixL [], FAD in the redox potential sensor NifL [], and a 4-hydroxycinnamyl chromophore in photoactive yellow protein []. Proteins containing the domain often contain other regulatory domains such as response regulator or sensor histidine kinase domains. Other S-box proteins include phytochromes and the aryl hydrocarbon receptor nuclear translocator. This domain has been found in the gene product of the madA gene of the filamentous zygomycete fungus Phycomyces blakesleeanus. It has been shown that MadA encodes a blue-light photoreceptor for phototropism and other light responses. The gene is involved in the phototropic responses associated with sporangiophore growth; they exhibit phototropism by bending toward near-UV and blue wavelengths and away from far-UV wavelengths in a manner that is physiologically similar to plant phototropic responses [].; GO: 0005515 protein binding; PDB: 3NJA_D 3H9W_A 3GDI_B 3ICY_A 3EEH_A 3MR0_B.
Probab=99.04 E-value=9.5e-10 Score=99.21 Aligned_cols=86 Identities=29% Similarity=0.408 Sum_probs=74.7
Q ss_pred EEeecHHHHHHcCCChhhhcCCC----CCccCCCCCCHHHHHHHHH-HHhcCCcEEEEEEEEecCCcEEEEEEEEeeeeC
Q 001847 500 IIFASDSFLELTEYSREEILGRN----CRFLQGPETDPATVRKIRA-AIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRD 574 (1005)
Q Consensus 500 i~~vN~a~~~l~Gy~~eEllG~~----~~~l~~~~~~~~~~~~i~~-~l~~~~~~~~e~~~~~kdG~~~wv~~~~~pi~d 574 (1005)
|+|||+++++++||+++++ +.. +..++||++...+.+.+.. .+..+..+..+++++++||+.+|++.++.+++|
T Consensus 1 ~i~~s~~~~~i~G~~~~~~-~~~~~~~~~~~ihpdD~~~~~~~~~~~~~~~~~~~~~e~R~~~~~G~~~wi~~~~~~~~d 79 (91)
T PF08447_consen 1 IIYWSDNFYEIFGYSPEEI-GKPDFEEWLERIHPDDRERVRQAIQQAALQNGEPFEIEYRIRRKDGEYRWIEVRGRPIFD 79 (91)
T ss_dssp -EEE-THHHHHHTS-HHHH-TCBEHHHHHHHB-TTTHHHHHHHHHHHHHHTT-EEEEEEEEEGTTSTEEEEEEEEEEEET
T ss_pred CEEEeHHHHHHhCCCHHHh-ccCCHHHHHhhcCHHHHHHHHHHHHHHhhccCcceEEEEEEECCCCCEEEEEEEEEEEEC
Confidence 6899999999999999999 766 7778999999999999999 778888999999999999999999999999999
Q ss_pred CCCCEEEEEEEE
Q 001847 575 QKGEVQYFIGVQ 586 (1005)
Q Consensus 575 ~~G~v~~~vgi~ 586 (1005)
++|+++.++|++
T Consensus 80 ~~g~~~~~~Gv~ 91 (91)
T PF08447_consen 80 ENGKPIRIIGVI 91 (91)
T ss_dssp TTS-EEEEEEEE
T ss_pred CCCCEEEEEEEC
Confidence 999999999984
No 474
>TIGR00229 sensory_box PAS domain S-box. The PAS domain was previously described. This sensory box, or S-box domain occupies the central portion of the PAS domain but is more widely distributed. It is often tandemly repeated. Known prosthetic groups bound in the S-box domain include heme in the oxygen sensor FixL, FAD in the redox potential sensor NifL, and a 4-hydroxycinnamyl chromophore in photoactive yellow protein. Proteins containing the domain often contain other regulatory domains such as response regulator or sensor histidine kinase domains. Other S-box proteins include phytochromes and the aryl hydrocarbon receptor nuclear translocator.
Probab=99.02 E-value=2.5e-09 Score=97.16 Aligned_cols=115 Identities=22% Similarity=0.351 Sum_probs=95.7
Q ss_pred HHHHHHhccccEEEEcCCCCCCCEEeecHHHHHHcCCChhhhcCCCCCccCCCCCCHHHHHHHHHHHhcC-CcEEEEEEE
Q 001847 477 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQ-TDVTVQLIN 555 (1005)
Q Consensus 477 l~~i~e~~~~~I~i~D~~G~d~~i~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~~-~~~~~e~~~ 555 (1005)
++.++++++++++++|.+|. ++++|+++++++|++.++++|..+..+.++.........+...+..+ .....+..+
T Consensus 5 ~~~~~~~~~~~~~~~d~~~~---i~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (124)
T TIGR00229 5 YRAIFESSPDAIIVIDLEGN---ILYVNPAFEEIFGYSAEELIGRNVLELIPEEDREEVRERIERLLEGEREPVSEERRV 81 (124)
T ss_pred HHHHHhhCCceEEEEcCCCc---EEEEchHHHHHhCCChHHhcCcchhhhcChhhhHHHHHHHHHHHcCCCCCcceEeee
Confidence 78899999999999999888 99999999999999999999999877777666555555555555533 234455555
Q ss_pred EecCCcEEEEEEEEeeeeCCCCCEEEEEEEEecCccCccc
Q 001847 556 YTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEP 595 (1005)
Q Consensus 556 ~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerK~~ 595 (1005)
..++|..+|+.....|+. .+|...+++++++|||++++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~dit~~~~~ 120 (124)
T TIGR00229 82 RRKDGSEIWVEVSVSPIR-TNGGELGVVGIVRDITERKQA 120 (124)
T ss_pred EcCCCCEEEEEEEEeehh-hCCCeeEEEEEeeehhHHHHH
Confidence 688999999999999998 788899999999999999874
No 475
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=99.00 E-value=1.2e-08 Score=114.56 Aligned_cols=205 Identities=18% Similarity=0.232 Sum_probs=145.5
Q ss_pred cEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceEEEEEEe----CCeEEEEEeccCC-Cch
Q 001847 685 TGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT----KTHVCLITDYCPG-GEL 759 (1005)
Q Consensus 685 ~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~----~~~~~lV~E~~~g-gsL 759 (1005)
..+.|++....+|..|++|.++........ ....-.++++++.|+|||.+.++|.. ...+++|++|+++ ++|
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~n---k~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL 365 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTN---KDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTL 365 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcc---cchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchH
Confidence 458899999999999999999544322222 22234678999999999999999873 4578999999975 577
Q ss_pred hhHHhh-------------CCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 001847 760 FLLLDR-------------QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 826 (1005)
Q Consensus 760 ~~~l~~-------------~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~ 826 (1005)
.++.-. ..+...++..+|.++.||..||.++|+.|+..+-|.|.+|+++.+-+++|...|.......
T Consensus 366 ~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~ 445 (655)
T KOG3741|consen 366 YDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQE 445 (655)
T ss_pred HHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcceEEEecccceeeecC
Confidence 665321 1223578899999999999999999999999999999999999888899987776533221
Q ss_pred CCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCC-CCCC
Q 001847 827 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF-RGKT 905 (1005)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLltG~~Pf-~~~~ 905 (1005)
++ . +.+.. -.+-|.=-||.+++.|.||..-- ....
T Consensus 446 d~---------------------------------------~--~~le~---~Qq~D~~~lG~ll~aLAt~~~ns~~~d~ 481 (655)
T KOG3741|consen 446 DP---------------------------------------T--EPLES---QQQNDLRDLGLLLLALATGTENSNRTDS 481 (655)
T ss_pred CC---------------------------------------C--cchhH---HhhhhHHHHHHHHHHHhhcccccccccc
Confidence 11 0 11111 13678999999999999996542 1222
Q ss_pred hHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCc
Q 001847 906 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKS 944 (1005)
Q Consensus 906 ~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~ 944 (1005)
........+. ..++.++.++|..+...++++
T Consensus 482 ~~~s~~~~I~--------~~yS~D~rn~v~yl~s~~~~~ 512 (655)
T KOG3741|consen 482 TQSSHLTRIT--------TTYSTDLRNVVEYLESLNFRE 512 (655)
T ss_pred hHHHHHHHhh--------hhhhHHHHHHHHHHHhcCccc
Confidence 2222111111 125667788888888888774
No 476
>PF08447 PAS_3: PAS fold; InterPro: IPR013655 The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs []. The PAS fold appears in archaea, eubacteria and eukarya. The PAS domain contains a sensory box, or S-box domain that occupies the central portion of the PAS domain but is more widely distributed. It is often tandemly repeated. Known prosthetic groups bound in the S-box domain include haem in the oxygen sensor FixL [], FAD in the redox potential sensor NifL [], and a 4-hydroxycinnamyl chromophore in photoactive yellow protein []. Proteins containing the domain often contain other regulatory domains such as response regulator or sensor histidine kinase domains. Other S-box proteins include phytochromes and the aryl hydrocarbon receptor nuclear translocator. This domain has been found in the gene product of the madA gene of the filamentous zygomycete fungus Phycomyces blakesleeanus. It has been shown that MadA encodes a blue-light photoreceptor for phototropism and other light responses. The gene is involved in the phototropic responses associated with sporangiophore growth; they exhibit phototropism by bending toward near-UV and blue wavelengths and away from far-UV wavelengths in a manner that is physiologically similar to plant phototropic responses [].; GO: 0005515 protein binding; PDB: 3NJA_D 3H9W_A 3GDI_B 3ICY_A 3EEH_A 3MR0_B.
Probab=98.96 E-value=3.3e-09 Score=95.68 Aligned_cols=86 Identities=28% Similarity=0.453 Sum_probs=73.3
Q ss_pred EEEccHHHHHHcCCChhhhcCCC----CCcCCCCCCChHHHHHHHH-HHHcCCcEEEEEEEEecCCcEEEEEEEeeeeec
Q 001847 217 IMYASAGFFKMTGYTSKEVVGRN----CRFLQGAGTDPEDVAKIRE-TLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKD 291 (1005)
Q Consensus 217 I~~vN~a~~~l~Gys~eEllG~~----~~~l~~~~~~~~~~~~i~~-~l~~g~~~~~e~~~~~kdG~~~wv~~~~~pi~d 291 (1005)
|+|||++|++++||+++++ |.. +..+++|++.......+.. .+..+..+..+++.+++||+.+|++.+..+++|
T Consensus 1 ~i~~s~~~~~i~G~~~~~~-~~~~~~~~~~~ihpdD~~~~~~~~~~~~~~~~~~~~~e~R~~~~~G~~~wi~~~~~~~~d 79 (91)
T PF08447_consen 1 IIYWSDNFYEIFGYSPEEI-GKPDFEEWLERIHPDDRERVRQAIQQAALQNGEPFEIEYRIRRKDGEYRWIEVRGRPIFD 79 (91)
T ss_dssp -EEE-THHHHHHTS-HHHH-TCBEHHHHHHHB-TTTHHHHHHHHHHHHHHTT-EEEEEEEEEGTTSTEEEEEEEEEEEET
T ss_pred CEEEeHHHHHHhCCCHHHh-ccCCHHHHHhhcCHHHHHHHHHHHHHHhhccCcceEEEEEEECCCCCEEEEEEEEEEEEC
Confidence 6899999999999999999 766 6677889888888888888 788888999999999999999999999999999
Q ss_pred CCCCEEEEEEEE
Q 001847 292 DEGKVLKFIGMQ 303 (1005)
Q Consensus 292 ~~G~v~~~v~~~ 303 (1005)
++|++.+++|+.
T Consensus 80 ~~g~~~~~~Gv~ 91 (91)
T PF08447_consen 80 ENGKPIRIIGVI 91 (91)
T ss_dssp TTS-EEEEEEEE
T ss_pred CCCCEEEEEEEC
Confidence 999999999874
No 477
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.95 E-value=4.6e-09 Score=111.45 Aligned_cols=140 Identities=24% Similarity=0.320 Sum_probs=107.0
Q ss_pred ccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCC--CCcceEEEEEEeC---CeEEEEEe
Q 001847 678 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH--PFVPALYASFQTK---THVCLITD 752 (1005)
Q Consensus 678 ~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l~h--pnIv~l~~~~~~~---~~~~lV~E 752 (1005)
+.|+.|.++.||++.... |..|++|........ .....+..|..+++.+.+ ..+++++.+.... +..++|||
T Consensus 4 ~~l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~--~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e 80 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGG-GRRLVLRRPPPGALL--PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVME 80 (223)
T ss_pred eecCCCccceEEEEEecC-CcceEEEeCCCcccC--cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEE
Confidence 568999999999998733 678999987654221 134567889999999965 4467787776653 36789999
Q ss_pred ccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH----------------------------------------
Q 001847 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC---------------------------------------- 792 (1005)
Q Consensus 753 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~---------------------------------------- 792 (1005)
|++|.++.+.+.. ..++......++.+++.+|.+||+
T Consensus 81 ~i~G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (223)
T cd05154 81 RVDGRVLRDRLLR---PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAM 157 (223)
T ss_pred EeCCEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHH
Confidence 9999988776532 236777777788888888888874
Q ss_pred ----------------cCcccCCCCCCcEEEec--CCcEEEEeccCCcc
Q 001847 793 ----------------QGIIYRDLKPENVLLQG--NGHVSLTDFDLSCL 823 (1005)
Q Consensus 793 ----------------~gIvHrDLkP~NILi~~--~g~vkL~DFG~a~~ 823 (1005)
..++|+|++|+||+++. ++.+.|+||+.+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 158 ERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 23699999999999998 56789999998854
No 478
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.87 E-value=4.9e-08 Score=106.27 Aligned_cols=134 Identities=19% Similarity=0.064 Sum_probs=94.5
Q ss_pred EEEEEEEcCCCeEEEEEEeeccccc---C-----hHHHHHHHHHHHHHHhCCCCCc--ceEEEEEEe-----CCeEEEEE
Q 001847 687 SVHLVELCGSGQYFAMKAMDKGVML---N-----RNKVHRACAEREILDMLDHPFV--PALYASFQT-----KTHVCLIT 751 (1005)
Q Consensus 687 ~Vy~a~~~~~~~~valK~~~~~~~~---~-----~~~~~~~~~E~~il~~l~hpnI--v~l~~~~~~-----~~~~~lV~ 751 (1005)
.|+++.. .|+.|.||........ . ........+|...+.+|..-+| +.+..++.. ...-++||
T Consensus 37 rvvr~~~--~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVt 114 (268)
T PRK15123 37 RTLRFEL--AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIIT 114 (268)
T ss_pred eEEEEEE--CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEE
Confidence 4556655 6778999976432210 0 0111136678888877743333 344445432 23478999
Q ss_pred eccCCC-chhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEec-------CCcEEEEeccCCc
Q 001847 752 DYCPGG-ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-------NGHVSLTDFDLSC 822 (1005)
Q Consensus 752 E~~~gg-sL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~-------~g~vkL~DFG~a~ 822 (1005)
|++++. +|.+++........+......++.+++..+..||..||+|+|++|+|||++. ++.+.|+||+.+.
T Consensus 115 e~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~ 193 (268)
T PRK15123 115 EDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ 193 (268)
T ss_pred eeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence 999875 8999886422234567778899999999999999999999999999999985 4679999999874
No 479
>COG3829 RocR Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms]
Probab=98.84 E-value=3.5e-08 Score=112.57 Aligned_cols=221 Identities=17% Similarity=0.182 Sum_probs=153.0
Q ss_pred HHHHHhcCCeEEEEeCCCCCCcEEEccHHHHHHcCCChhhhcCCCCCcCCCCCCChHHHHHHHHHHHcCCcEEEEEEEEe
Q 001847 195 KDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYK 274 (1005)
Q Consensus 195 ~~ile~~~~~i~i~D~~~~dg~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~ 274 (1005)
+.+++.+.++++++|. ...|..+|..+..+++-....++|+++..+.+....+.. . .+..+........
T Consensus 4 ~~~l~~~~~~~~vi~~---~~~~~~~~~~a~~~~~~~~~~~i~~~~~~i~~~~~~~~v-------~-~~~~~~~~~~~~~ 72 (560)
T COG3829 4 EGILKSILDGPVVIDK---NTGIDVANALALAKRQKNAEAVIGRPLREILETLGMERV-------E-QSRDKELTERLKL 72 (560)
T ss_pred hhhhhhcccceEEEEc---CCceeeechHHHHhhhcceEEEecccceeeccccCccee-------e-ccCccceeeeeec
Confidence 4589999999999998 445999999999999999999999998866655433221 1 2222222222223
Q ss_pred cCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhhcCCCCCchhhhhHHHHHHHHhhhhHHHHHHHccCCCC
Q 001847 275 KDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTELVQAMKKPRS 354 (1005)
Q Consensus 275 kdG~~~wv~~~~~pi~d~~G~v~~~v~~~~DITerk~~E~~L~~~~~~l~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~ 354 (1005)
+ + .. ..+...++.++.|+++|++.++.|+++..+.-.+..
T Consensus 73 ~-~-~~-~~~~~~~~~~~~~~~~g~~~~~~~~~e~~~~~~~~l------------------------------------- 112 (560)
T COG3829 73 K-V-KR-IVVVGKTPVDEQGRVVGVLEVFLDISEALELIEENL------------------------------------- 112 (560)
T ss_pred c-c-ee-EEEcCCceeecCCceeeeehhhhhhHHHHHHHHHHH-------------------------------------
Confidence 3 3 22 333444556788999999999999998443322210
Q ss_pred cccCCCCCcccccCCCCchhhhcccccCCCCCCCCCCCCCCCCCCcccccccccccchhhccccCCcccccccccccccC
Q 001847 355 LSESTNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGGCRTSMQRISEVPEKKKQKSGRRSFMGLIGRKSQST 434 (1005)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (1005)
T Consensus 113 -------------------------------------------------------------------------------- 112 (560)
T COG3829 113 -------------------------------------------------------------------------------- 112 (560)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCccccccccCCCCCCCCCCCCCchhhHHHHHHHhhcccHHHHHHhccccEEEEcCCCCCCCEEeecHHHHHHcCCC
Q 001847 435 DDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYS 514 (1005)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~er~~~e~~l~~~~~l~~i~e~~~~~I~i~D~~G~d~~i~~vN~a~~~l~Gy~ 514 (1005)
.... ..|+.+++.+.++++++|.+|. ++++|.++..++|++
T Consensus 113 -------------------------------~~~~-----~~l~~il~~~~~~l~vvD~~G~---~i~~N~~~~~~~gl~ 153 (560)
T COG3829 113 -------------------------------RQLR-----QRLEAILDSIDDGLLVVDEDGI---IIYYNKAYAKLLGLS 153 (560)
T ss_pred -------------------------------HHHH-----HHHHHHHhhccCceEEEcCCCc---EEEEcHHHHHHhCCC
Confidence 0000 1289999999999999999999 999999999999999
Q ss_pred hhhhcCCCCCccCCCCCCHHHHHHHHHHHhcCCcEEEEEEEEecCCcEEEEEEEEeeeeCCCCCEEEEEEEEecCccCcc
Q 001847 515 REEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLE 594 (1005)
Q Consensus 515 ~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerK~ 594 (1005)
.++++|+++.++...... ......+..+.+.......+..++. ..+..|++ .+|.+.|.+++++|+++-+.
T Consensus 154 ~e~~~gk~~~~v~~~~~~----s~~l~vl~~~kp~~~~~~~~~~~~~----i~~~~pv~-~~g~l~G~v~~~~~~~~l~~ 224 (560)
T COG3829 154 PEEVLGKHLLDVVSAGED----STLLEVLRTGKPIRDVVQTYNGNKI----IVNVAPVY-ADGQLIGVVGISKDVSELER 224 (560)
T ss_pred HHHHcCCcHHHHHhccCC----ceehhhhhcCCcceeeeeeecCCce----eEeeccEe-cCCcEEEEEEeecchHHHHH
Confidence 999999997666411111 1234556677765554443333332 34556766 46799999999999998766
No 480
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.83 E-value=2.4e-08 Score=102.55 Aligned_cols=127 Identities=24% Similarity=0.207 Sum_probs=82.5
Q ss_pred EEEEEEEcCCCeEEEEEEeeccccc-----------------------ChHHHHHHHHHHHHHHhCCCC--CcceEEEEE
Q 001847 687 SVHLVELCGSGQYFAMKAMDKGVML-----------------------NRNKVHRACAEREILDMLDHP--FVPALYASF 741 (1005)
Q Consensus 687 ~Vy~a~~~~~~~~valK~~~~~~~~-----------------------~~~~~~~~~~E~~il~~l~hp--nIv~l~~~~ 741 (1005)
.||.|.. ..|..+|+|+.+..... .........+|...|.++..- ++++++.+.
T Consensus 1 ~Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 3888887 56889999988742110 001123456799999999765 577777542
Q ss_pred EeCCeEEEEEeccC--CCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHH-HHHcCcccCCCCCCcEEEecCCcEEEEec
Q 001847 742 QTKTHVCLITDYCP--GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEY-LHCQGIIYRDLKPENVLLQGNGHVSLTDF 818 (1005)
Q Consensus 742 ~~~~~~~lV~E~~~--ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~-LH~~gIvHrDLkP~NILi~~~g~vkL~DF 818 (1005)
.-+|||||++ |..+..+.... ++......++.+++..+.. +|..||+||||.+.|||++.+ .+.|+||
T Consensus 80 ----~~~ivME~I~~~G~~~~~l~~~~----~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~-~~~iIDf 150 (188)
T PF01163_consen 80 ----RNVIVMEYIGEDGVPLPRLKDVD----LSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG-KVYIIDF 150 (188)
T ss_dssp ----TTEEEEE--EETTEEGGCHHHCG----GGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT-CEEE--G
T ss_pred ----CCEEEEEecCCCccchhhHHhcc----ccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc-eEEEEec
Confidence 3369999997 65555443321 2234567778888885555 679999999999999999966 9999999
Q ss_pred cCCcc
Q 001847 819 DLSCL 823 (1005)
Q Consensus 819 G~a~~ 823 (1005)
|.+..
T Consensus 151 ~qav~ 155 (188)
T PF01163_consen 151 GQAVD 155 (188)
T ss_dssp TTEEE
T ss_pred Cccee
Confidence 98844
No 481
>cd00130 PAS PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in signal transduction.
Probab=98.79 E-value=1.4e-07 Score=81.33 Aligned_cols=103 Identities=27% Similarity=0.422 Sum_probs=89.2
Q ss_pred ccccEEEEcCCCCCCCEEeecHHHHHHcCCChhhhcCCCCCccCCCCCCHHHHHHHHHHHhcCCcEEEEEEEEecCCcEE
Q 001847 484 IEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKF 563 (1005)
Q Consensus 484 ~~~~I~i~D~~G~d~~i~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e~~~~~kdG~~~ 563 (1005)
++++++++|.+|. ++++|+++++++|++.++++|..+..+.+++........+...+..+.....+......+|..+
T Consensus 1 ~~~~i~~~d~~~~---~~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (103)
T cd00130 1 LPDGVIVLDLDGR---ILYANPAAEQLLGYSPEELIGKSLLDLIHPEDREELRERLENLLSGGEPVTLEVRLRRKDGSVI 77 (103)
T ss_pred CCceEEEECCCCc---EEEECHHHHHHhCCCHHHHcCccHHHhcCCccchHHHHHHHHHHhcCcCeEEEEEEEccCCCEE
Confidence 3678999999888 9999999999999999999999987777777776666666666666667778888888999999
Q ss_pred EEEEEEeeeeCCCCCEEEEEEEEecC
Q 001847 564 WNLFHLQPMRDQKGEVQYFIGVQLDG 589 (1005)
Q Consensus 564 wv~~~~~pi~d~~G~v~~~vgi~~DI 589 (1005)
|+.....++.+..|...+++++.+||
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~di 103 (103)
T cd00130 78 WVLVSLTPIRDEGGEVIGLLGVVRDI 103 (103)
T ss_pred EEEEEEEEEecCCCCEEEEEEEEecC
Confidence 99999999999888999999999986
No 482
>PRK11073 glnL nitrogen regulation protein NR(II); Provisional
Probab=98.79 E-value=2e-08 Score=114.65 Aligned_cols=136 Identities=13% Similarity=0.163 Sum_probs=97.7
Q ss_pred cHHHHHHhccccEEEEcCCCCCCCEEeecHHHHHHcCCChhhhcCCCCCccCCCCCCHHHHHHHHHHHhcCCcEEEEEEE
Q 001847 476 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLIN 555 (1005)
Q Consensus 476 ~l~~i~e~~~~~I~i~D~~G~d~~i~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e~~~ 555 (1005)
.++.+++++++|++++|.+|. |+++|+++++++||+.++++|+++..+.+... .....+...+..+..+..+...
T Consensus 8 ~~~~il~~~~~gi~~~d~~~~---i~~~N~a~~~~~g~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 82 (348)
T PRK11073 8 DAGQILNSLINSILLLDDDLA---IHYANPAAQQLLAQSSRKLFGTPLPELLSYFS--LNIELMRESLQAGQGFTDNEVT 82 (348)
T ss_pred hHHHHHhcCcCeEEEECCCCe---EeeEcHHHHHHhCCCHHHHcCCCHHHHcCcch--hhHHHHHHHHHcCCcccccceE
Confidence 389999999999999999888 99999999999999999999999877765432 2233445566666555444455
Q ss_pred EecCCcEEEEEEEEeeeeCCCCCEEEEEEEEecCccCccccccCCchhhHHHHHHHHHHHhhhhhh
Q 001847 556 YTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNSIPEATAEESEKLVKQTAENVNE 621 (1005)
Q Consensus 556 ~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerK~~e~~~~~~~~~~e~~~l~~~~~~~v~~ 621 (1005)
..+||..+|+.++..|+. . .+++..++|||++++.++++..+.........+..++|.+.+
T Consensus 83 ~~~~g~~~~~~~~~~~~~--~---~~~~~~~~dit~~~~~~~~~~~~~~~~~~~~~~~~iaHelr~ 143 (348)
T PRK11073 83 LVIDGRSHILSLTAQRLP--E---GMILLEMAPMDNQRRLSQEQLQHAQQVAARDLVRGLAHEIKN 143 (348)
T ss_pred EEECCceEEEEEEEEEcc--C---ceeEEEEechhHHHHHHHHHHHHHHHHHHHHHHHhhhHhhcC
Confidence 667999999999999997 2 245677899999988544433222222333344444444443
No 483
>cd00130 PAS PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in signal transduction.
Probab=98.77 E-value=1.8e-07 Score=80.57 Aligned_cols=103 Identities=24% Similarity=0.479 Sum_probs=86.6
Q ss_pred cCCeEEEEeCCCCCCcEEEccHHHHHHcCCChhhhcCCCCCcCCCCCCChHHHHHHHHHHHcCCcEEEEEEEEecCCcEE
Q 001847 201 FQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPF 280 (1005)
Q Consensus 201 ~~~~i~i~D~~~~dg~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~ 280 (1005)
++++++++|. +|.++++|+++++++|++.++++|+.+..+.++.........+...+..+..+..++.....+|..+
T Consensus 1 ~~~~i~~~d~---~~~~~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (103)
T cd00130 1 LPDGVIVLDL---DGRILYANPAAEQLLGYSPEELIGKSLLDLIHPEDREELRERLENLLSGGEPVTLEVRLRRKDGSVI 77 (103)
T ss_pred CCceEEEECC---CCcEEEECHHHHHHhCCCHHHHcCccHHHhcCCccchHHHHHHHHHHhcCcCeEEEEEEEccCCCEE
Confidence 3578899998 7779999999999999999999999987676666665566666666666666777888888899999
Q ss_pred EEEEEeeeeecCCCCEEEEEEEEecc
Q 001847 281 WNLLTIAPIKDDEGKVLKFIGMQVEV 306 (1005)
Q Consensus 281 wv~~~~~pi~d~~G~v~~~v~~~~DI 306 (1005)
|+.+...++.+..|...+++++.+||
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~di 103 (103)
T cd00130 78 WVLVSLTPIRDEGGEVIGLLGVVRDI 103 (103)
T ss_pred EEEEEEEEEecCCCCEEEEEEEEecC
Confidence 99999999999888999999999886
No 484
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.76 E-value=4.3e-09 Score=122.58 Aligned_cols=171 Identities=19% Similarity=0.329 Sum_probs=124.0
Q ss_pred HHHHHHHHHHHHHc-CcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccc
Q 001847 780 AAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRAS 858 (1005)
Q Consensus 780 ~~qil~aL~~LH~~-gIvHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 858 (1005)
+.+.+.|+.|+|.. ++||++|.|++|.++.+|..||+.|+++............ .......
T Consensus 105 l~~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~------------------~yd~~lp 166 (700)
T KOG2137|consen 105 LGNVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFS------------------EYDPPLP 166 (700)
T ss_pred hhcccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCccccc------------------cCCCCCC
Confidence 34555999999975 9999999999999999999999999987543321111000 0111112
Q ss_pred cccccCCcccccccccCCCCCChhhHHHHHHHHHHHH-cCCCCCCCCChHHHHHHHHhC--C-CCCCCCCCCCHHHHHHH
Q 001847 859 NSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFANILHK--D-LKFPSSTPTSLHAKQLM 934 (1005)
Q Consensus 859 ~~~~gt~~y~aPE~l~~~~~~~~sDIwSlGvll~eLl-tG~~Pf~~~~~~~~~~~i~~~--~-~~~~~~~~~s~~l~~Ll 934 (1005)
....-...|.|||++.....+.++|+|||||++|.+. .|+..+........+ ..... + ..+.....++.++++=|
T Consensus 167 ~~~~~~~~f~apE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~-~~~~~~~~~~~~~~s~~~p~el~~~l 245 (700)
T KOG2137|consen 167 LLLQPHLNFLAPEYLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSY-SFSRNLLNAGAFGYSNNLPSELRESL 245 (700)
T ss_pred hhhccCcccccchhhccccccccccceeeeeEEEEEecCCcchhhccCCcchh-hhhhcccccccccccccCcHHHHHHH
Confidence 2233466899999999988889999999999999999 566666544332222 22211 1 12223356788999999
Q ss_pred HHccccCcCccCCChhcHHHHHcCCCCCCCChhhhhhcC
Q 001847 935 YRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMN 973 (1005)
Q Consensus 935 ~~~L~~dP~~Rpt~~~~a~elL~hpff~~~~~~~~~~~~ 973 (1005)
.+++..++.-||+ +.+++..|||...-...+++..
T Consensus 246 ~k~l~~~~~~rp~----~~~l~~~~ff~D~~~~aLrfLD 280 (700)
T KOG2137|consen 246 KKLLNGDSAVRPT----LDLLLSIPFFSDPGLKALRFLD 280 (700)
T ss_pred HHHhcCCcccCcc----hhhhhcccccCCchhhhhhhcc
Confidence 9999999999998 9999999999998888887643
No 485
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.75 E-value=2e-07 Score=102.35 Aligned_cols=238 Identities=19% Similarity=0.243 Sum_probs=155.1
Q ss_pred ccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceEEEE------EEeCC-eE
Q 001847 676 PIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYAS------FQTKT-HV 747 (1005)
Q Consensus 676 ~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~------~~~~~-~~ 747 (1005)
..+.||+|+-+.+|-+.... -.+-|++..... .... +....|... .||-+..-+.| ..... .+
T Consensus 15 ~gr~LgqGgea~ly~l~e~~---d~VAKIYh~Ppp---a~~a---qk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~i 85 (637)
T COG4248 15 PGRPLGQGGEADLYTLGEVR---DQVAKIYHAPPP---AAQA---QKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVI 85 (637)
T ss_pred CCccccCCccceeeecchhh---chhheeecCCCc---hHHH---HHHHHhccCCCCcchhhhhcccHHHhhCCCcccee
Confidence 34779999999999776432 367788876422 1111 122233333 56655431111 11222 26
Q ss_pred EEEEeccCCC-chhhHH----hhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCc
Q 001847 748 CLITDYCPGG-ELFLLL----DRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 822 (1005)
Q Consensus 748 ~lV~E~~~gg-sL~~~l----~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~vkL~DFG~a~ 822 (1005)
.++|..+.|. ....++ +++......+..+...++.|+.+.+.||..|.+-+|++++|+|+++++.|.|+|-....
T Consensus 86 GflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfq 165 (637)
T COG4248 86 GFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQ 165 (637)
T ss_pred EEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEccccee
Confidence 7888888664 222222 23445567888999999999999999999999999999999999999999999876432
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCccccccccc-----CCCCCChhhHHHHHHHHHHHHcC
Q 001847 823 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYG 897 (1005)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~-----~~~~~~~sDIwSlGvll~eLltG 897 (1005)
.. .+.......+|.+.|.+||.-. +..-+...|-|.||+++++|+.|
T Consensus 166 i~----------------------------~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~g 217 (637)
T COG4248 166 IN----------------------------ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFG 217 (637)
T ss_pred ec----------------------------cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhc
Confidence 21 1222334568999999999754 23345679999999999999985
Q ss_pred -CCCCCCCCh----HHHHH-HHHhC-----------CCCCCCC---CCCCHHHHHHHHHccccC--cCccCCChh
Q 001847 898 -YTPFRGKTR----QKTFA-NILHK-----------DLKFPSS---TPTSLHAKQLMYRLLHRD--PKSRLGSHE 950 (1005)
Q Consensus 898 -~~Pf~~~~~----~~~~~-~i~~~-----------~~~~~~~---~~~s~~l~~Ll~~~L~~d--P~~Rpt~~~ 950 (1005)
+.||.|... ...++ .|..+ ..+.|.. .-+++.++.|+.+|+... +.-||+...
T Consensus 218 grHPysGI~~~~~ap~p~E~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~a 292 (637)
T COG4248 218 GRHPYSGIPLISDAPNPLETDIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKA 292 (637)
T ss_pred CCCCCCcccccCCCCCcchhhhhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHH
Confidence 999976221 11111 22222 1122222 235678889999999763 567999654
No 486
>PRK11360 sensory histidine kinase AtoS; Provisional
Probab=98.73 E-value=8.7e-08 Score=117.42 Aligned_cols=141 Identities=16% Similarity=0.129 Sum_probs=106.3
Q ss_pred cHHHHHHhccccEEEEcCCCCCCCEEeecHHHHHHcCCChhhhcCCCCCccCCCCCCHHHHHHHHHHHhcCCc-EEEEEE
Q 001847 476 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTD-VTVQLI 554 (1005)
Q Consensus 476 ~l~~i~e~~~~~I~i~D~~G~d~~i~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~~~~-~~~e~~ 554 (1005)
.++.++++++++++++|.+|. ++++|+++++++||+.++++|+++..+.+++. .....+...+..+.. ...+..
T Consensus 263 ~~~~i~~~~~~~i~~~d~~g~---i~~~N~~~~~l~g~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 337 (607)
T PRK11360 263 LNELILESIADGVIAIDRQGK---ITTMNPAAEVITGLQRHELVGKPYSELFPPNT--PFASPLLDTLEHGTEHVDLEIS 337 (607)
T ss_pred HHHHHHHhccCeEEEEcCCCC---EEEECHHHHHHhCCChHHhcCCcHHHHcCCch--hHHHHHHHHHhcCCCccceEEE
Confidence 378899999999999999888 99999999999999999999999877776542 233344555554443 445667
Q ss_pred EEecCCcEEEEEEEEeeeeCCCCCEEEEEEEEecCccCccccccCCchhhHHHHHHHHHHHhhhhhhh
Q 001847 555 NYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNSIPEATAEESEKLVKQTAENVNEA 622 (1005)
Q Consensus 555 ~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerK~~e~~~~~~~~~~e~~~l~~~~~~~v~~~ 622 (1005)
..+++|..+ +.++..|+.+.+|.+.+++++++|||++|+.+.+.........+.+.+..+.|.+.+.
T Consensus 338 ~~~~~~~~~-~~~~~~~i~~~~g~~~~~i~~~~Dite~~~~e~~l~~~~~~~~l~~~~~~~~hel~~~ 404 (607)
T PRK11360 338 FPGRDRTIE-LSVSTSLLHNTHGEMIGALVIFSDLTERKRLQRRVARQERLAALGELVAGVAHEIRNP 404 (607)
T ss_pred EEcCCCcEE-EEEEEeeEEcCCCCEEEEEEEEeechHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 778888876 8999999999999999999999999999996554443333333334444455554443
No 487
>TIGR02966 phoR_proteo phosphate regulon sensor kinase PhoR. Members of this protein family are the regulatory histidine kinase PhoR associated with the phosphate ABC transporter in most Proteobacteria. Related proteins from Gram-positive organisms are not included in this model. The phoR gene usually is adjacent to the response regulator phoB gene (TIGR02154).
Probab=98.72 E-value=4.8e-08 Score=110.09 Aligned_cols=114 Identities=14% Similarity=0.114 Sum_probs=89.1
Q ss_pred cchHHHHHHHHHhcCCeEEEEeCCCCCCcEEEccHHHHHHcCCChhhhcCCCCCcCCCCCCChHHHHHHHHHHHcCCcEE
Q 001847 188 PRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYC 267 (1005)
Q Consensus 188 ~~~~~~l~~ile~~~~~i~i~D~~~~dg~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~ 267 (1005)
....+.|+.++++++++|+++|. +|+|+++|++|++++||+.++++|+++..+..+ ..+...+..+.. .
T Consensus 2 ~~~~~~l~~~~~~~~~~i~~~d~---~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~-------~~~~~~l~~~~~-~ 70 (333)
T TIGR02966 2 SALLSRFRAAAQALPDAVVVLDE---EGQIEWCNPAAERLLGLRWPDDLGQRITNLIRH-------PEFVEYLAAGRF-S 70 (333)
T ss_pred hhHHHHHHHHHHhCcCcEEEECC---CCcEEEEcHHHHHHhCCChHHHcCCcHHHHccC-------HHHHHHHHhccc-C
Confidence 45667899999999999999999 777999999999999999999999998766443 123334443332 2
Q ss_pred EEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhh
Q 001847 268 GRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 317 (1005)
Q Consensus 268 ~e~~~~~kdG~~~wv~~~~~pi~d~~G~v~~~v~~~~DITerk~~E~~L~ 317 (1005)
.......++|..+|+.+.+.|+.+.+ ++++++|||++++.++.++
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~p~~~~~-----~~~~~~dit~~~~~~~~~~ 115 (333)
T TIGR02966 71 EPLELPSPINSERVLEIRIAPYGEEQ-----KLLVARDVTRLRRLEQMRR 115 (333)
T ss_pred CCeEeecCCCCceEEEEEEEEcCCCc-----eEEEEeCchHHHHHHHHHH
Confidence 23455568899999999999987642 6788999999998876644
No 488
>TIGR02966 phoR_proteo phosphate regulon sensor kinase PhoR. Members of this protein family are the regulatory histidine kinase PhoR associated with the phosphate ABC transporter in most Proteobacteria. Related proteins from Gram-positive organisms are not included in this model. The phoR gene usually is adjacent to the response regulator phoB gene (TIGR02154).
Probab=98.68 E-value=8.1e-08 Score=108.24 Aligned_cols=103 Identities=11% Similarity=0.026 Sum_probs=81.8
Q ss_pred cHHHHHHhccccEEEEcCCCCCCCEEeecHHHHHHcCCChhhhcCCCCCccCCCCCCHHHHHHHHHHHhcCCcEEEEEEE
Q 001847 476 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLIN 555 (1005)
Q Consensus 476 ~l~~i~e~~~~~I~i~D~~G~d~~i~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e~~~ 555 (1005)
.|+.+++++++||+++|.+|. |+++|++|++++||++++++|+++..+.+++ . +...+..+.. ......
T Consensus 7 ~l~~~~~~~~~~i~~~d~~g~---i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~---~----~~~~l~~~~~-~~~~~~ 75 (333)
T TIGR02966 7 RFRAAAQALPDAVVVLDEEGQ---IEWCNPAAERLLGLRWPDDLGQRITNLIRHP---E----FVEYLAAGRF-SEPLEL 75 (333)
T ss_pred HHHHHHHhCcCcEEEECCCCc---EEEEcHHHHHHhCCChHHHcCCcHHHHccCH---H----HHHHHHhccc-CCCeEe
Confidence 389999999999999999988 9999999999999999999999977775542 2 2333333222 223555
Q ss_pred EecCCcEEEEEEEEeeeeCCCCCEEEEEEEEecCccCcc
Q 001847 556 YTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLE 594 (1005)
Q Consensus 556 ~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerK~ 594 (1005)
..++|..+|+.+...|+.+.. ++++++|||++++
T Consensus 76 ~~~~~~~~~~~~~~~p~~~~~-----~~~~~~dit~~~~ 109 (333)
T TIGR02966 76 PSPINSERVLEIRIAPYGEEQ-----KLLVARDVTRLRR 109 (333)
T ss_pred ecCCCCceEEEEEEEEcCCCc-----eEEEEeCchHHHH
Confidence 568899999999999997643 6788999999887
No 489
>PRK11073 glnL nitrogen regulation protein NR(II); Provisional
Probab=98.67 E-value=2e-07 Score=106.34 Aligned_cols=117 Identities=17% Similarity=0.213 Sum_probs=92.7
Q ss_pred HHHHHHHHHhcCCeEEEEeCCCCCCcEEEccHHHHHHcCCChhhhcCCCCCcCCCCCCChHHHHHHHHHHHcCCcEEEEE
Q 001847 191 SDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRL 270 (1005)
Q Consensus 191 ~~~l~~ile~~~~~i~i~D~~~~dg~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~ 270 (1005)
...+.++++++++|++++|. +|+|+++|+++++++||+.++++|+++..+.+... .....+...+..+..+..+.
T Consensus 6 ~~~~~~il~~~~~gi~~~d~---~~~i~~~N~a~~~~~g~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 80 (348)
T PRK11073 6 LPDAGQILNSLINSILLLDD---DLAIHYANPAAQQLLAQSSRKLFGTPLPELLSYFS--LNIELMRESLQAGQGFTDNE 80 (348)
T ss_pred cchHHHHHhcCcCeEEEECC---CCeEeeEcHHHHHHhCCCHHHHcCCCHHHHcCcch--hhHHHHHHHHHcCCcccccc
Confidence 35678999999999999998 78899999999999999999999999887765432 22344556666666555444
Q ss_pred EEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhh
Q 001847 271 LNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 317 (1005)
Q Consensus 271 ~~~~kdG~~~wv~~~~~pi~d~~G~v~~~v~~~~DITerk~~E~~L~ 317 (1005)
..+.+||..+|+.++.+|+. . .+++..++|||++++.++++.
T Consensus 81 ~~~~~~g~~~~~~~~~~~~~--~---~~~~~~~~dit~~~~~~~~~~ 122 (348)
T PRK11073 81 VTLVIDGRSHILSLTAQRLP--E---GMILLEMAPMDNQRRLSQEQL 122 (348)
T ss_pred eEEEECCceEEEEEEEEEcc--C---ceeEEEEechhHHHHHHHHHH
Confidence 55678999999999999986 2 246778999999998877654
No 490
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.64 E-value=1.6e-07 Score=98.84 Aligned_cols=137 Identities=22% Similarity=0.204 Sum_probs=102.2
Q ss_pred ccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccC------h-------------HHHHHHHHHHHHHHhCCCC--
Q 001847 674 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN------R-------------NKVHRACAEREILDMLDHP-- 732 (1005)
Q Consensus 674 y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~------~-------------~~~~~~~~E~~il~~l~hp-- 732 (1005)
+.+...||-|--|.||.|.+ ..|.++|||.-+.+...= . .......+|.++|..|...
T Consensus 93 e~iG~~IGvGKEsdVY~~~~-~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAID-PKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HhhccccccCccceEEEEEC-CCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 45567899999999999998 478999999765431110 0 1122345788999999665
Q ss_pred CcceEEEEEEeCCeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCc
Q 001847 733 FVPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH 812 (1005)
Q Consensus 733 nIv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~ 812 (1005)
.|++.+++ +.-++||||++|-.|...- ++......++..|+.-+..+-..|+||+|+.+-||+++.+|.
T Consensus 172 ~VP~P~~~----nRHaVvMe~ieG~eL~~~r-------~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~dg~ 240 (304)
T COG0478 172 KVPKPIAW----NRHAVVMEYIEGVELYRLR-------LDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTEDGD 240 (304)
T ss_pred CCCCcccc----ccceeeeehcccceeeccc-------CcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEecCCC
Confidence 78888765 5568999999887775543 233445556666676666666899999999999999999999
Q ss_pred EEEEeccCCc
Q 001847 813 VSLTDFDLSC 822 (1005)
Q Consensus 813 vkL~DFG~a~ 822 (1005)
+.++||--+.
T Consensus 241 ~~vIDwPQ~v 250 (304)
T COG0478 241 IVVIDWPQAV 250 (304)
T ss_pred EEEEeCcccc
Confidence 9999999663
No 491
>PRK11360 sensory histidine kinase AtoS; Provisional
Probab=98.64 E-value=1.9e-07 Score=114.42 Aligned_cols=128 Identities=13% Similarity=0.121 Sum_probs=105.2
Q ss_pred ccccchHHHHHHHHHhcCCeEEEEeCCCCCCcEEEccHHHHHHcCCChhhhcCCCCCcCCCCCCChHHHHHHHHHHHcCC
Q 001847 185 KGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ 264 (1005)
Q Consensus 185 ~~L~~~~~~l~~ile~~~~~i~i~D~~~~dg~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~ 264 (1005)
..+...+..++.++++++++++++|. +|+|+++|+++++++||+.++++|+++..++++.. .....+...+..+.
T Consensus 255 ~~l~~~~~~~~~i~~~~~~~i~~~d~---~g~i~~~N~~~~~l~g~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~ 329 (607)
T PRK11360 255 QALRETRSLNELILESIADGVIAIDR---QGKITTMNPAAEVITGLQRHELVGKPYSELFPPNT--PFASPLLDTLEHGT 329 (607)
T ss_pred HHHHHHHHHHHHHHHhccCeEEEEcC---CCCEEEECHHHHHHhCCChHHhcCCcHHHHcCCch--hHHHHHHHHHhcCC
Confidence 34666778889999999999999998 77799999999999999999999999887766542 23344555565554
Q ss_pred cE-EEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhhc
Q 001847 265 SY-CGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKML 318 (1005)
Q Consensus 265 ~~-~~e~~~~~kdG~~~wv~~~~~pi~d~~G~v~~~v~~~~DITerk~~E~~L~~ 318 (1005)
.. ..++....++|..+ +.++..|+.+.+|.+.+++++++|||+++++|++++.
T Consensus 330 ~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~g~~~~~i~~~~Dite~~~~e~~l~~ 383 (607)
T PRK11360 330 EHVDLEISFPGRDRTIE-LSVSTSLLHNTHGEMIGALVIFSDLTERKRLQRRVAR 383 (607)
T ss_pred CccceEEEEEcCCCcEE-EEEEEeeEEcCCCCEEEEEEEEeechHHHHHHHHHHH
Confidence 43 34566678888776 8999999999999999999999999999999988763
No 492
>KOG0501 consensus K+-channel KCNQ [Inorganic ion transport and metabolism]
Probab=98.64 E-value=9.5e-08 Score=107.00 Aligned_cols=119 Identities=27% Similarity=0.600 Sum_probs=104.8
Q ss_pred HHHHHHhcc---ccEEEEcCCCCCCCEEeecHHHHHHcCCChhhhcCCC--CCccCCCCCCHHHHHHHHHHHhcCCcEEE
Q 001847 477 LATTLERIE---KNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRN--CRFLQGPETDPATVRKIRAAIDNQTDVTV 551 (1005)
Q Consensus 477 l~~i~e~~~---~~I~i~D~~G~d~~i~~vN~a~~~l~Gy~~eEllG~~--~~~l~~~~~~~~~~~~i~~~l~~~~~~~~ 551 (1005)
++.++..+. ..+++.+++-.|++|+|+|+.||++.||.+.|++.++ +.+++++-.+....+.+++.+.+.+.-++
T Consensus 16 LENiiRRsn~~dtsFlL~NAQiVD~PiVY~NdgFcKlsGY~RAevMQKs~tc~FMyGEltdk~ti~k~~~t~eN~~~~qf 95 (971)
T KOG0501|consen 16 LENIIRRSNNADTSFLLANAQIVDWPIVYCNDGFCKLSGYHRAEVMQKSCTCSFMYGELTDKGTIEKVRQTLENYETNQF 95 (971)
T ss_pred HHHHHhhccCCCcceeeccceeeccceEEecCcchhccCccHHHHhcccceeeeeeccccchhhHHHHHHHHHhhhhcce
Confidence 566665444 4455556666699999999999999999999999888 56778888888888999999999999999
Q ss_pred EEEEEecCCcEEEEEEEEeeeeCCCCCEEEEEEEEecCccCccc
Q 001847 552 QLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEP 595 (1005)
Q Consensus 552 e~~~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerK~~ 595 (1005)
|.-++.|+.+.+|..+.+.||+++...++.|++.+.|||.-||+
T Consensus 96 EillyKKN~TPvW~~vqiAPIrNe~d~VVLfLctFkDIT~~KQP 139 (971)
T KOG0501|consen 96 EILLYKKNRTPVWLLVQIAPIRNEKDKVVLFLCTFKDITALKQP 139 (971)
T ss_pred eeEeeecCCCceEEEEEeecccCCCceEEEEEeecccchhhcCC
Confidence 99999999999999999999999999999999999999999996
No 493
>PF13596 PAS_10: PAS domain; PDB: 3CAX_A 2QKP_D.
Probab=98.64 E-value=1.6e-07 Score=87.60 Aligned_cols=106 Identities=16% Similarity=0.304 Sum_probs=74.4
Q ss_pred HHHHHHhcCCeEEEEeCCCCCCcEEEccHHHHHHcCCChhhhcCCCCCcCCCCCCChHHHHHHHHHHHcCCcEEEEEEEE
Q 001847 194 VKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNY 273 (1005)
Q Consensus 194 l~~ile~~~~~i~i~D~~~~dg~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~ 273 (1005)
++.++++++.+++++|. +++|.++|+++.++++... ..+|+++..+.++.... ....+.+.+..|+....+...
T Consensus 1 L~~il~s~~~~i~~vD~---~~~I~~~n~~a~~~f~~~~-~~iGr~l~~~~~~~~~~-~l~~~i~~~~~~~~~~~~~~~- 74 (106)
T PF13596_consen 1 LNNILDSMPIGIIFVDR---NLRIRYFNPAAARLFNLSP-SDIGRPLFDIHPPLSYP-NLKKIIEQVRSGKEEEFEIVI- 74 (106)
T ss_dssp HHHHHHHSSSEEEEEET---TSBEEEE-SCGC-SS---G-GGTTSBCCCSS-HHHHH-HHHHHHHHHHTTSBSEEEEEE-
T ss_pred ChHHHhcCCCCEEEEcC---CCeEEEeChhHhhhcCCCh-HHCCCCHHHcCCccchH-HHHHHHHHHHcCCCceEEEEe-
Confidence 46899999999999999 8889999999999999764 56899999887663333 333444555666653333332
Q ss_pred ecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccc
Q 001847 274 KKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 307 (1005)
Q Consensus 274 ~kdG~~~wv~~~~~pi~d~~G~v~~~v~~~~DIT 307 (1005)
..+|. |+.+++.|+++.+|+..|++.++.|||
T Consensus 75 ~~~~~--~~~~~~~P~~~~~g~~~G~v~~~~DIT 106 (106)
T PF13596_consen 75 PNGGR--WYLVRYRPYRDEDGEYAGAVITFQDIT 106 (106)
T ss_dssp EETTE--EEEEEEEEEE-TTS-EEEEEEEEEE-G
T ss_pred cCCCE--EEEEEEEEEECCCCCEEEEEEEEEecC
Confidence 35554 678899999999999999999999998
No 494
>PF12860 PAS_7: PAS fold
Probab=98.58 E-value=2.1e-07 Score=88.15 Aligned_cols=105 Identities=21% Similarity=0.297 Sum_probs=74.8
Q ss_pred HHhcCCeEEEEeCCCCCCcEEEccHHHHHHcCCChhhh-cCCCCCcCC---------CCCCChHHHHHHHHHHHcCCcEE
Q 001847 198 LSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEV-VGRNCRFLQ---------GAGTDPEDVAKIRETLQNGQSYC 267 (1005)
Q Consensus 198 le~~~~~i~i~D~~~~dg~I~~vN~a~~~l~Gys~eEl-lG~~~~~l~---------~~~~~~~~~~~i~~~l~~g~~~~ 267 (1005)
++++++||++.|. +|+++++|++|.+++|++.+.+ .|.++..+. .+.............+.......
T Consensus 1 Ld~l~~Gv~v~D~---~~rl~~~N~~~~~l~~~~~~~~~~G~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (115)
T PF12860_consen 1 LDSLPQGVAVFDS---DGRLVFWNQRFRELFGLPPEMLRPGASFRDLLRRLAERGEFPPGDPEAWVRQRLARLRRRQPRS 77 (115)
T ss_pred CCCcCceEEEEcC---CCeEEeEcHHHHHHhCCCHHHhcCCCCHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhcCCCce
Confidence 4789999999999 8889999999999999999998 788865332 11222233333333344444433
Q ss_pred EEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHH
Q 001847 268 GRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAK 314 (1005)
Q Consensus 268 ~e~~~~~kdG~~~wv~~~~~pi~d~~G~v~~~v~~~~DITerk~~E~ 314 (1005)
.+. ...||. |++++..|+ ++| |+|.++.|||+++++|+
T Consensus 78 ~~~--~~~dgr--~l~~~~~~~--~~G---g~v~~~~DVT~~~~~E~ 115 (115)
T PF12860_consen 78 FEL--RLPDGR--WLEVRAQPL--PDG---GFVLTFTDVTERRRAEE 115 (115)
T ss_pred eEE--ECCCCE--EEEEEeEEC--CCC---CEEEEEEeCCHHHHhcC
Confidence 333 468886 678888888 445 57789999999999874
No 495
>PRK09902 hypothetical protein; Provisional
Probab=98.57 E-value=7.7e-07 Score=91.98 Aligned_cols=140 Identities=14% Similarity=0.151 Sum_probs=102.5
Q ss_pred cccCcEEEEEEEEcCCCeEEEEEEeecccccC---hHHHHHHHHHHHHHHhCCCC--CcceEEEEEE-e----CCeEEEE
Q 001847 681 GSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN---RNKVHRACAEREILDMLDHP--FVPALYASFQ-T----KTHVCLI 750 (1005)
Q Consensus 681 G~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~---~~~~~~~~~E~~il~~l~hp--nIv~l~~~~~-~----~~~~~lV 750 (1005)
|.||.|.|+.... .|+.|-+|.-....... +.....+.+|...+.+|..- .++++. ++. . .-..+||
T Consensus 27 ~rgG~SgV~r~~~--~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 27 RRNGMSGVQCVER--NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred CCCCcceEEEEEe--CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 6789999999886 44468888664211111 33456788898888888432 255555 332 1 1246799
Q ss_pred EeccCC-CchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCc--EEEEeccCCcc
Q 001847 751 TDYCPG-GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH--VSLTDFDLSCL 823 (1005)
Q Consensus 751 ~E~~~g-gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g~--vkL~DFG~a~~ 823 (1005)
+|-+.| .+|.+++....-...+......++.+++.++.-||+.|+.|+|+.+.||+++.+|. +.++||.-++.
T Consensus 104 Te~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 104 TEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 997743 68888876543345677888899999999999999999999999999999987777 99999997643
No 496
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.57 E-value=9e-07 Score=91.75 Aligned_cols=143 Identities=21% Similarity=0.269 Sum_probs=95.2
Q ss_pred ccccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHH------HHHHHHHHHhC---CCCCcce
Q 001847 666 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHR------ACAEREILDML---DHPFVPA 736 (1005)
Q Consensus 666 ~~~i~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~~~~~~~~~~~~~~~------~~~E~~il~~l---~hpnIv~ 736 (1005)
+.-+....|.+.+.+.......|.+..- .|+.|++|..+....-....... ..+.+..+.++ .......
T Consensus 25 ~~~i~~~~~~~~kv~k~~~r~~ValIei--~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~ 102 (229)
T PF06176_consen 25 GEKILDNNYKIIKVFKNTKRNYVALIEI--DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPAD 102 (229)
T ss_pred HHHHHhCCceEEEeecCCCccEEEEEEE--CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCcccccc
Confidence 3445567899999999999888888876 77899999887542111111111 11233333333 2222223
Q ss_pred EEEEE-----EeCCeEEEEEeccCCCchhhHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCC
Q 001847 737 LYASF-----QTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG 811 (1005)
Q Consensus 737 l~~~~-----~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIvHrDLkP~NILi~~~g 811 (1005)
++-+. ......+++|||++|..|.++.. +++ .+...|..++.-||+.|+.|+|.+|+|++++. +
T Consensus 103 ~yl~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~------i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~-~ 171 (229)
T PF06176_consen 103 PYLAAEKKIFRYTSSYVLLMEYIEGVELNDIED------IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVSN-N 171 (229)
T ss_pred ceeeeeeeeccceeEEEEEEEEecCeecccchh------cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEEC-C
Confidence 22222 22345578999999988877642 232 24466778899999999999999999999995 4
Q ss_pred cEEEEeccCC
Q 001847 812 HVSLTDFDLS 821 (1005)
Q Consensus 812 ~vkL~DFG~a 821 (1005)
.++++||+..
T Consensus 172 ~i~iID~~~k 181 (229)
T PF06176_consen 172 GIRIIDTQGK 181 (229)
T ss_pred cEEEEECccc
Confidence 5999999965
No 497
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.54 E-value=1e-06 Score=92.71 Aligned_cols=106 Identities=27% Similarity=0.286 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHHhCCCC--CcceEEEEEEeC----CeEEEEEeccCC-CchhhHHhhCCCCCCCHHHHHHHHHHHHHHHH
Q 001847 716 VHRACAEREILDMLDHP--FVPALYASFQTK----THVCLITDYCPG-GELFLLLDRQPTKVLKEDAVRFYAAEVVVALE 788 (1005)
Q Consensus 716 ~~~~~~E~~il~~l~hp--nIv~l~~~~~~~----~~~~lV~E~~~g-gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~ 788 (1005)
..+..+|...+..|..- .++.++.+.... ...++|+|++++ .+|.+++..... ++......++.+++..++
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~--~~~~~~~~ll~~l~~~i~ 132 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ--LDPSQRRELLRALARLIA 132 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc--cchhhHHHHHHHHHHHHH
Confidence 34566777777777433 345666665542 245899999987 489999876322 667778899999999999
Q ss_pred HHHHcCcccCCCCCCcEEEecCC---cEEEEeccCCcc
Q 001847 789 YLHCQGIIYRDLKPENVLLQGNG---HVSLTDFDLSCL 823 (1005)
Q Consensus 789 ~LH~~gIvHrDLkP~NILi~~~g---~vkL~DFG~a~~ 823 (1005)
-||.+||+|+|++|.|||++.++ .+.|+||+.+..
T Consensus 133 ~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 133 KLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 99999999999999999999887 899999997744
No 498
>KOG0501 consensus K+-channel KCNQ [Inorganic ion transport and metabolism]
Probab=98.51 E-value=3.6e-07 Score=102.50 Aligned_cols=121 Identities=31% Similarity=0.634 Sum_probs=103.3
Q ss_pred HHHHHHHHhcC--C-eEEEEeCCCCCCcEEEccHHHHHHcCCChhhhcCCCCC--cCCCCCCChHHHHHHHHHHHcCCcE
Q 001847 192 DIVKDALSTFQ--Q-TFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCR--FLQGAGTDPEDVAKIRETLQNGQSY 266 (1005)
Q Consensus 192 ~~l~~ile~~~--~-~i~i~D~~~~dg~I~~vN~a~~~l~Gys~eEllG~~~~--~l~~~~~~~~~~~~i~~~l~~g~~~ 266 (1005)
..++.++..+. | .+++.+..-.|..|+|+|..||++.||.+.|+..+++. +++++..+....+.+++.++..+..
T Consensus 14 TFLENiiRRsn~~dtsFlL~NAQiVD~PiVY~NdgFcKlsGY~RAevMQKs~tc~FMyGEltdk~ti~k~~~t~eN~~~~ 93 (971)
T KOG0501|consen 14 TFLENIIRRSNNADTSFLLANAQIVDWPIVYCNDGFCKLSGYHRAEVMQKSCTCSFMYGELTDKGTIEKVRQTLENYETN 93 (971)
T ss_pred hHHHHHHhhccCCCcceeeccceeeccceEEecCcchhccCccHHHHhcccceeeeeeccccchhhHHHHHHHHHhhhhc
Confidence 34455554433 3 44444555558889999999999999999999999865 7788888999999999999999988
Q ss_pred EEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHH
Q 001847 267 CGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEG 312 (1005)
Q Consensus 267 ~~e~~~~~kdG~~~wv~~~~~pi~d~~G~v~~~v~~~~DITerk~~ 312 (1005)
+.|+..++|+-..+|+.+.+.||+++...++-|+++++|||..|+-
T Consensus 94 qfEillyKKN~TPvW~~vqiAPIrNe~d~VVLfLctFkDIT~~KQP 139 (971)
T KOG0501|consen 94 QFEILLYKKNRTPVWLLVQIAPIRNEKDKVVLFLCTFKDITALKQP 139 (971)
T ss_pred ceeeEeeecCCCceEEEEEeecccCCCceEEEEEeecccchhhcCC
Confidence 9999999999999999999999999999999999999999998874
No 499
>PF13596 PAS_10: PAS domain; PDB: 3CAX_A 2QKP_D.
Probab=98.49 E-value=4.7e-07 Score=84.41 Aligned_cols=106 Identities=20% Similarity=0.317 Sum_probs=73.8
Q ss_pred HHHHHHhccccEEEEcCCCCCCCEEeecHHHHHHcCCChhhhcCCCCCccCCCCCCHHHHHHHHHHHhcCCcEEEEEEEE
Q 001847 477 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 556 (1005)
Q Consensus 477 l~~i~e~~~~~I~i~D~~G~d~~i~~vN~a~~~l~Gy~~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~~~~~~~e~~~~ 556 (1005)
++.++++++.++.++|.++. |.+.|+++.++|+.. ...+|+++..+.++.........+ +.+..+.....+...
T Consensus 1 L~~il~s~~~~i~~vD~~~~---I~~~n~~a~~~f~~~-~~~iGr~l~~~~~~~~~~~l~~~i-~~~~~~~~~~~~~~~- 74 (106)
T PF13596_consen 1 LNNILDSMPIGIIFVDRNLR---IRYFNPAAARLFNLS-PSDIGRPLFDIHPPLSYPNLKKII-EQVRSGKEEEFEIVI- 74 (106)
T ss_dssp HHHHHHHSSSEEEEEETTSB---EEEE-SCGC-SS----GGGTTSBCCCSS-HHHHHHHHHHH-HHHHTTSBSEEEEEE-
T ss_pred ChHHHhcCCCCEEEEcCCCe---EEEeChhHhhhcCCC-hHHCCCCHHHcCCccchHHHHHHH-HHHHcCCCceEEEEe-
Confidence 46789999999999999888 999999999999976 466899998887664444444444 444455443333333
Q ss_pred ecCCcEEEEEEEEeeeeCCCCCEEEEEEEEecCc
Q 001847 557 TKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGS 590 (1005)
Q Consensus 557 ~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DIT 590 (1005)
..+|. |+.++..|+++++|...|++.++.|||
T Consensus 75 ~~~~~--~~~~~~~P~~~~~g~~~G~v~~~~DIT 106 (106)
T PF13596_consen 75 PNGGR--WYLVRYRPYRDEDGEYAGAVITFQDIT 106 (106)
T ss_dssp EETTE--EEEEEEEEEE-TTS-EEEEEEEEEE-G
T ss_pred cCCCE--EEEEEEEEEECCCCCEEEEEEEEEecC
Confidence 35565 667899999999999999999999998
No 500
>PF12860 PAS_7: PAS fold
Probab=98.47 E-value=5e-07 Score=85.55 Aligned_cols=104 Identities=22% Similarity=0.284 Sum_probs=73.2
Q ss_pred HHhccccEEEEcCCCCCCCEEeecHHHHHHcCCChhhh-cCCCCCccC---------CCCCCHHHHHHHHHHHhcCCcEE
Q 001847 481 LERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEI-LGRNCRFLQ---------GPETDPATVRKIRAAIDNQTDVT 550 (1005)
Q Consensus 481 ~e~~~~~I~i~D~~G~d~~i~~vN~a~~~l~Gy~~eEl-lG~~~~~l~---------~~~~~~~~~~~i~~~l~~~~~~~ 550 (1005)
+++++.||++.|.+|+ ++++|++|.+++|++.+.+ .|.++..++ .+.....................
T Consensus 1 Ld~l~~Gv~v~D~~~r---l~~~N~~~~~l~~~~~~~~~~G~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (115)
T PF12860_consen 1 LDSLPQGVAVFDSDGR---LVFWNQRFRELFGLPPEMLRPGASFRDLLRRLAERGEFPPGDPEAWVRQRLARLRRRQPRS 77 (115)
T ss_pred CCCcCceEEEEcCCCe---EEeEcHHHHHHhCCCHHHhcCCCCHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhcCCCce
Confidence 4678999999999888 9999999999999999998 788854332 22222223333333333333333
Q ss_pred EEEEEEecCCcEEEEEEEEeeeeCCCCCEEEEEEEEecCccCcccc
Q 001847 551 VQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPL 596 (1005)
Q Consensus 551 ~e~~~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerK~~e 596 (1005)
.+ ....||. |+.++..|+ .+| ++|.++.|||+++++|
T Consensus 78 ~~--~~~~dgr--~l~~~~~~~--~~G---g~v~~~~DVT~~~~~E 114 (115)
T PF12860_consen 78 FE--LRLPDGR--WLEVRAQPL--PDG---GFVLTFTDVTERRRAE 114 (115)
T ss_pred eE--EECCCCE--EEEEEeEEC--CCC---CEEEEEEeCCHHHHhc
Confidence 33 4568886 677888888 456 5778999999999853
Done!