Query 001850
Match_columns 1005
No_of_seqs 222 out of 1256
Neff 8.3
Searched_HMMs 29240
Date Tue Mar 26 16:57:45 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001850.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1145-1149//hhsearch_pdb/001850hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bvx_A Alpha-mannosidase 2; fa 1.0 1 1 1485.3 91.0 903 30-1005 70-1043(1045)
2 2wyh_A Alpha-mannosidase; hydr 1.0 1 1 1139.9 76.7 816 30-1005 15-922 (923)
3 3lvt_A Glycosyl hydrolase, fam 1.0 1 1 1062.1 76.3 816 38-1004 4-898 (899)
4 1o7d_A Lysosomal alpha-mannosi 1.0 1 1 613.0 33.2 293 29-322 2-297 (298)
5 1o7d_D Lysosomal alpha-mannosi 1.0 1 1 484.0 29.5 269 600-874 2-274 (282)
6 1o7d_C Lysosomal alpha-mannosi 1.0 1 1 226.5 17.2 150 399-581 2-151 (159)
7 1o7d_E Lysosomal alpha-mannosi 1.0 1 1 194.0 9.8 116 883-1005 3-120 (126)
8 1k1x_A 4-alpha-glucanotransfer 1.0 1 1 178.0 29.4 253 39-336 2-260 (659)
9 1o7d_B Lysosomal alpha-mannosi 1.0 1 1 160.2 6.6 74 320-393 2-75 (84)
10 3p0b_A TT1467 protein; glycosi 1.0 1 1 95.0 13.3 290 106-423 137-493 (540)
No 1
>3bvx_A Alpha-mannosidase 2; family 38 glycoysl hydrolase, glycosidase, golgi apparatus, membrane, signal-anchor, transmembrane; HET: WZ5; 1.10A {Drosophila melanogaster} SCOP: a.8.3.1 b.30.5.6 c.6.2.1 PDB: 3bud_A 3buq_A* 3bvt_A* 3bui_A* 3bvv_A* 3bvw_A* 3bvu_A* 3cv5_A* 3czn_A* 3czs_A* 2ow6_A* 1r33_A* 1r34_A* 1tqs_A* 1tqt_A* 1tqu_A* 1tqv_A* 1tqw_A* 2alw_A* 2f18_A* ...
Probab=1.00 E-value=1 Score=1485.29 Aligned_cols=903 Identities=26% Similarity=0.438 Sum_probs=758.8
Q ss_pred ECCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHC
Q ss_conf 24898734781199999353568972164776431577642136699999999999981999829993157899999504
Q 001850 30 YNTGAGVVAGKLNVHLVAHSHDDVGWLKTVDQYYVGSNNSIQSACVENVLDSVVEALRRDPNRKFVFAEMAFFHRWWVGQ 109 (1005)
Q Consensus 30 ~~~~~~~~~~~~~v~lvpHSH~D~gWl~t~~~y~~~~~~~~~~~~v~~il~~vi~~L~~~p~~kF~~~e~~~~~~ww~~~ 109 (1005)
|+.+.+....+++||+|||||+|+||+||+++|++ ..++++|++|+++|+++|++||+|+|+++|++||+++
T Consensus 70 ~~~~~~~~~~~~~V~lV~HsH~D~gWl~t~~e~~~--------~~~~~~~~~vl~~L~~~p~~~F~~~e~~~l~~w~~e~ 141 (1045)
T 3bvx_A 70 YDPLKYNAHHKLKVFVVPHSHNDPGWIQTFEEYYQ--------HDTKHILSNALRHLHDNPEMKFIWAEISYFARFYHDL 141 (1045)
T ss_dssp CCGGGSBTTBCEEEEEEEEEECCSSSSSCHHHHHH--------HTHHHHHHHHHHHHHHCTTCCEEECCHHHHHHHHHHS
T ss_pred HHCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHH--------HHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHC
T ss_conf 52214477786389999357888653444877615--------9999999999999977999679995489999999977
Q ss_pred CHHHHHHHHHHHHCCCEEEECEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHCC
Q ss_conf 90799999999974986999111212124688968899999989999998809998301542889887566899864229
Q 001850 110 SPEIQEQVRKLVDASQLEFVNGGWCMHDEATTHYVDMIDQTTLGHHYIKQHFNKTPKAGWQIDPFGHSAVQAYLLGVELG 189 (1005)
Q Consensus 110 ~p~~~~~vk~lV~~GrlE~v~Ggwv~~Dea~~~~esiI~ql~~G~~~l~~~fG~~p~vgW~iD~FGhs~~~p~ll~~~~G 189 (1005)
+|+++++||+||++|||||+||||||+|||+++|||+||||++||+|++++||+.|++||+|||||||+++|+||+ +||
T Consensus 142 ~Pe~~~~vk~lV~~Grle~~gG~Wv~~De~~~~~EslirQl~~G~~~~~~~FG~~~~~~W~pD~FG~s~~lPqil~-~~G 220 (1045)
T 3bvx_A 142 GENKKLQMKSIVKNGQLEFVTGGWVMPDEANSHWRNVLLQLTEGQTWLKQFMNVTPTASWAIAPFGHSPTMPYILQ-KSG 220 (1045)
T ss_dssp CHHHHHHHHHHHHTTSEEESSCCSSCBCSSSCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCSSSBCTHHHHHHH-TTT
T ss_pred CHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHH-HCC
T ss_conf 9999999999975899999887011411567998999999999999999982999725872799986589999999-759
Q ss_pred CCEEEEECCCHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEECCC-CCCCC------C----CCCCCCCCC---CCCCC
Q ss_conf 9379983037777875310687036995389999987036762689-98899------9----978556799---99866
Q 001850 190 FDSVHFARIDYQDRAKRKEDKSLEVIWRGSKTFGSSSQIFTNAFPV-HYSPP------S----GFHFELTDD---FDPVQ 255 (1005)
Q Consensus 190 ~~~~~~~Ri~~~~k~~~~~~~~~eF~W~~~~~~~~~s~i~th~~~~-~Y~~p------~----~f~fd~~~~---~~p~~ 255 (1005)
|++++++|++|++++.|+..+.+||+|+|+++...|++||||++|. +|+.| . .|+|+...+ .|||.
T Consensus 221 i~~~~~~R~~~~~~~~~~~~k~~eF~W~~~w~~~dGs~Ilt~~~p~~~Y~~~~~~gp~~~~c~~fdf~~l~~~~~~~~~~ 300 (1045)
T 3bvx_A 221 FKNMLIQRTHYSVKKELAQQRQLEFLWRQIWDNKGDTALFTHMMPFYSYDIPHTCGPDPKVCCQFDFKRMGSFGLSCPWK 300 (1045)
T ss_dssp CCEEEECCCCHHHHHHHHHTTCSEEEECCTTCSSCTTCEEEEECCSSCSSGGGTSSSCHHHHGGGCGGGSSTTSCCCTTS
T ss_pred CCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 97599941442000001236784599837777999994899861566657665568885533121202245654457556
Q ss_pred CCC-CCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHH---HHHHHHHHHHHHCCC--CEEEEECCHH
Q ss_conf 798-8875558999999999999751115998179960378775643789---999999999985489--2469985935
Q 001850 256 DNP-LLDGYNVEQWVNDFIDAALTQANVTRDNHIMWTMGDDFQYQYAESW---FKQMDKLIHYVNKGG--RVNALYSTPS 329 (1005)
Q Consensus 256 ~~~-~~~~~n~~~~~~~~~~~~~~~~~~~~t~~il~~~G~Df~~~~a~~~---~~~~~~li~~~N~~~--~~~i~~sT~~ 329 (1005)
++| .++++|++++++.+++++++++..|+++++|+|+|+||+|.++..| |+||+++|+++|+.+ .++++|||++
T Consensus 301 ~~p~~~~~~nv~~r~~~~~~~~~~~~~~~~t~~~l~~~G~d~~~~~~~~~~~~~~n~~~li~~in~~~~~~~~v~~sT~~ 380 (1045)
T 3bvx_A 301 VPPRTISDQNVAARSDLLVDQWKKKAELYRTNVLLIPLGDDFRFKQNTEWDVQRVNYERLFEHINSQAHFNVQAQFGTLQ 380 (1045)
T ss_dssp CCCCCCCTTTHHHHHHHHHHHHHHHHTTSSSSEEEEEEEEETCSCSHHHHHHHHHHHHHHHHHHHHCGGGCEEEEECCHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHH
T ss_conf 77655627999999999999999861035788699995479888652256788888999999986088877069987999
Q ss_pred HHHHHHHHCC----CCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCC---CCCCCCHHH
Q ss_conf 4899987269----999986677744544589730136512311245798764699999998786189---999972279
Q 001850 330 LYTEAKNAAN----GPWPLKTDDYFPYADRRNAYWTGFFTSRPALKGYVRVLSGFYLASRQLEFLAGK---KSPGPTTSA 402 (1005)
Q Consensus 330 ~Yf~~v~~~~----~~~p~~~gDf~py~~~~~~ywtG~yTSr~~~K~~~R~~e~~L~~ae~l~~l~~~---~~~~~~~~~ 402 (1005)
+||+++++.. ..||+++||||||+++.++||+|||||||++|+++|++|++|++||+|.+++.. .++...+++
T Consensus 381 ~yf~~l~~~~~~~~~~lp~~~Ge~~~~~~~~~~yw~G~yTSr~~~K~~nR~~e~~L~~aE~l~ala~~~~~~~~~~~L~~ 460 (1045)
T 3bvx_A 381 EYFDAVHQAERAGQAEFPTLSGDFFTYADRSDNYWSGYYTSRPYHKRMDRVLMHYVRAAEMLSAWHSWDGMARIEERLEQ 460 (1045)
T ss_dssp HHHHHHHHHHHTTSCCCCEEESCBCSCEEETTEECCGGGTSSHHHHHHHHHHHHHHHHHHHHHHTSCCCGGGCHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
T ss_conf 99999986521444668614774366566776300632605689999999999999999999999876178760899999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC---CCCCCCCCCCCCCCCC
Q ss_conf 9999874324567789874101489999999999999999999999986176898777999---8764456765446899
Q 001850 403 LGDALGIAQHHDAVTGTAKQHTTNDYAKRLAIGASEAEVVVSSSLSCLASRKSGHQCTKPA---STFSQCPLLNISYCPP 479 (1005)
Q Consensus 403 lw~~l~~~QhHDaItGTs~~~V~~dy~~rl~~a~~~~~~~~~~~l~~l~~~~~~~~~~~~~---~~~~~~~~ln~s~~~~ 479 (1005)
+|++|+++||||+||||++++|++||.+||..+.+.++.++..+++.|+..... .+..++ ..++.|.+++.+.|+.
T Consensus 461 ~wk~lll~QhHD~i~Gts~~~V~~d~~~rl~~a~~~~~~l~~~al~~L~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (1045)
T 3bvx_A 461 ARRELSLFQHHDGITGTAKTHVVVDYEQRMQEALKACQMVMQQSVYRLLTKPSI-YSPDFSFSYFTLDDSRWPGSGVEDS 539 (1045)
T ss_dssp HHHHHHHHTBTTTTTSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTBCTTT-CCCCTTSCSEEEECSSSSCTTTCCC
T ss_pred HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCCCCCCCCCCHHHHCCCCCCCCCC
T ss_conf 999975502566777758079999999999999999999999999998634343-3444322111101210123234665
Q ss_pred CCCCCCCCC---EEEEEEECCCCCEEEEEEEEEECCCCEEEECCCCCEEEEEEEECCCCCCCCCCHHHHHCCCCCCCCCC
Q ss_conf 887789998---08999993999504579999965983899979998676999622632221100012010278888888
Q 001850 480 TEKGIPEGK---NLVVAAYNPLGWNRTDIIRIPVNDANLIVKDPLGNAINVQYVNLDNVTSNLRKFYTEAYLGQSSKRVP 556 (1005)
Q Consensus 480 ~~~~~~~~~---~~~i~vfNpl~~~r~~~v~i~v~~~~~~v~d~~g~~v~~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 556 (1005)
.......++ ...++|||||+|+|+++|+++|+.+.+.|.|.+|++|++|+++.+.....+....+ .......
T Consensus 540 ~~~i~~~~~~~~~~~vvvfN~L~~~r~~~V~v~v~~~~~~V~D~~G~~v~~Qi~~~~~~~~~~~~~~~-----~~~~~~~ 614 (1045)
T 3bvx_A 540 RTTIILGEDILPSKHVVMHNTLPHWREQLVDFYVSSPFVSVTDLANNPVEAQVSPVWSWHHDTLTKTI-----HPQGSTT 614 (1045)
T ss_dssp CCEECCBTTTBSEEEEEEEECSSSCEEEEEEEEESCSCEEEEETTCCEECEEEEEEEEEEEETTTTEE-----EEEEEEE
T ss_pred CCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEEECCCCEEEECCCCCEEEEEEEECCCCCCCCCCCCC-----CCCCCCC
T ss_conf 44323466656774699994998502269999951686699828989875899632344443111124-----4557787
Q ss_pred CEEEEEEEECCCCCEEEEEEEECCCCCC-CCCCCE----------ECC-CCCCCCCEEECCCEE------EEEEECCCCC
Q ss_conf 1899999840998227999996478654-222210----------013-799998239668728------9999737873
Q 001850 557 RYWLLFQVTVPPLGWNTYFISRAAGKVK-RRKGFF----------LAA-DSPQDKTVEVGPGNL------KMSFSRTTGQ 618 (1005)
Q Consensus 557 ~~~l~f~a~ipplG~~~y~i~~~~~~~~-~~~~~~----------~~~-~~~~~~~~~ieN~~~------~i~~d~~~G~ 618 (1005)
.|+|+|.++||||||++|.|..+..... ...+.+ ... .....+...|||+++ +|+||+ +|.
T Consensus 615 ~~~L~f~a~vP~lG~~ty~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~leN~~~~~~~~~~v~fd~-~G~ 693 (1045)
T 3bvx_A 615 KYRIIFKARVPPMGLATYVLTISDSKPEHTSYASNLLLRKNPTSLPLGQYPEDVKFGDPREISLRVGNGPTLAFSE-QGL 693 (1045)
T ss_dssp EEEEEEEEEECTTEEEEEEEEECSSCCTTEEECEEEEECSSCCCCCCTTCSSCCEEECCCCEEEECTTSCEEEECT-TSC
T ss_pred CEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEECC-CCC
T ss_conf 2799998013885369999983687655444322000135664221234566777425504522156653799878-886
Q ss_pred EEEEEECCCCEEEEEEEEEEEEECCCCCCCCCCCEEECCCCC-CCCCCCCCCEEEEECCCEEEEEEEECCEEEEEEEEEE
Q ss_conf 799993588707756478999612578999786168069996-4002787429999657427999994253999999952
Q 001850 619 LKRMYNSRTGVDVPIQQSFLWYGSMVDTQSSGAYIFRPNGAQ-PNVVSRSVPIKIIRGPMVDEVHQQFNSWIYQVTRLYI 697 (1005)
Q Consensus 619 l~si~dk~~g~~~~~~~~~~~Y~~~~~~~~sgaY~f~p~~~~-~~~~~~~~~i~v~~G~l~~~i~~~~~s~i~q~irL~~ 697 (1005)
|+||+||++|+++.+.++|.+|.+...++.||||+|+|++.+ +... ....+.+++||++++|++.+ .+++|++||
T Consensus 694 L~si~dk~~g~e~~~~~~f~~Y~~~~~~~~sgaY~F~P~~~~~~~~~-~~~~~~v~~Gpl~~ev~~~~-~~i~q~irL-- 769 (1045)
T 3bvx_A 694 LKSIQLTQDSPHVPVHFKFLKYGVRSHGDRSGAYLFLPNGPASPVEL-GQPVVLVTKGKLESSVSVGL-PSVVHQTIM-- 769 (1045)
T ss_dssp EEEEECSTTSCCEEEEEEEEEECBCSSSCCCCSSCCCBSSSCEECCC-CSCCEEEEECSSCEEEEEEE-TTEEEEEEE--
T ss_pred EEEEEECCCCEEEEEEEEEEEEECCCCCCCCCCEEECCCCCCCCCCC-CCCEEEEEECCEEEEEEEEE-EEEEEEEEE--
T ss_conf 79999747981887766788872566899886137657988765346-88459999688689999997-259999998--
Q ss_pred CCCCEEEEEEECCEECCCCCCCEEEEEEEEEECCCCEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCEEEEE
Q ss_conf 48840699998771045899948999999630589689972677420001246555645588887432047413158896
Q 001850 698 DKEHAEVEYTIGPIPTEDSVGKEVISRMTANMVTEKVFYTDSNGRDFLKRVRDYRADWSLQVNEPVAGNYYPLNLGIFIT 777 (1005)
Q Consensus 698 ~~~~ie~e~~v~~ip~~~~~~~el~~rf~t~i~s~~~fytDsnG~~~i~R~~~~r~~w~~~~~~pv~~nyYPv~s~i~I~ 777 (1005)
++++||+++.|+. .+..+||++++|+|+|++++.||||+|||++++|+++. .+|+++|||||+++|+|+
T Consensus 770 ~~~~ieie~~Vd~---~~~~~~el~~rf~t~i~s~~~fyTD~nG~~~ikR~~~~--------~~p~~~NyYPv~s~~~i~ 838 (1045)
T 3bvx_A 770 RGGAPEIRNLVDI---GSLDNTEIVMRLETHIDSGDIFYTDLNGLQFIKRRRLD--------KLPLQANYYPIPSGMFIE 838 (1045)
T ss_dssp SSSSCEEEEEECC---TTCTTEEEEEEEEECCCCTTEEEEEETTTEEEEEECCT--------TSCGGGGCEEESSEEEEE
T ss_pred CCEEEEEEEEEEC---CCCCCEEEEEEEECCCCCCCEEEEECCCCEEEECCCCC--------CCCCCCCEEEEEEEEEEE
T ss_conf 9912899999935---78887489999445657887389926886368757788--------887314168741368997
Q ss_pred ECCCEEEEEECCCCCEEECCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCH-----
Q ss_conf 288208999257751110359679999996522579876234345553224677770576349883045675300-----
Q 001850 778 DKKSEFSVLVDRATGGASIKDGQVEIMLHRRMLADDGRGVGEALDESVCVRDNCEGLTVRGNYYLSVNQLGAGAR----- 852 (1005)
Q Consensus 778 D~~~~ltvltdr~~G~~sl~~G~ielmL~Rr~~~dD~rGv~e~l~e~~~~~~~~~gl~~~g~~~l~~~~~~~~~~----- 852 (1005)
|++.||||++||++||+|+++|+||||||||+++||+|||||+|+|+ ++++|+|||++++......
T Consensus 839 D~~~~ltvl~drs~G~sSl~~G~lElmlhRrl~~DD~rGvge~l~d~---------~~~~~~~~l~l~~~~~~~~~~~~~ 909 (1045)
T 3bvx_A 839 DANTRLTLLTGQPLGGSSLASGELEIMQDRRLASDDERGLGQGVLDN---------KPVLHIYRLVLEKVNNCVRPSKLH 909 (1045)
T ss_dssp CSSEEEEEEESSCEEEECCSTTEEEEEEEEEBCSCCSSSCCSCBCCC---------CCEEEEEEEEEEECTTSCCCCTTC
T ss_pred CCCEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCC---------CEEEEEEEEEEECCCCCCCCCCCC
T ss_conf 59826999956776666567975899996641257765546666677---------400048999982565445445456
Q ss_pred -------HCCCCHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC-----EEEEEECC--
Q ss_conf -------1012013240563343303432222233357666676688899740489944429993-----89987400--
Q 001850 853 -------WRRTTGQEVYSPLLLAFTQEKLETWTESHLTKSTAMESDYSLPLNVALITLEELDDGS-----VLLRLAHL-- 918 (1005)
Q Consensus 853 -------~~r~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lp~~ihlltl~~~~~~~-----illRl~~~-- 918 (1005)
..|..++++++||+++++.... + ....++|+++.. +|||||||+|||+++++. +|||| |.
T Consensus 910 ~~~~~s~~~~~~~~~l~~p~~~~~~~~~~--~-~~~~~~~~~l~~--~lP~~vhlltL~~~~~~~~~~~~~ll~L-~~~~ 983 (1045)
T 3bvx_A 910 PAGYLTSAAHKASQSLLDPLDKFIFAENE--W-IGAQGQFGGDHP--SAREDLDVSVMRRLTKSSAKTQRVGYVL-HRTN 983 (1045)
T ss_dssp SEECCCHHHHHHHHHHHSCCEEEEECSSC--C-TTBCSEECTTSC--CCCTTEEEEEEEECSCTTCSEEEEEEEE-EECC
T ss_pred CCCCCCHHHHHHHHHHHCCCCEEECCCCC--C-CCCCCCCCCCCC--CCCCCEEEEEEEECCCCCCCCCEEEEEE-EEEC
T ss_conf 54445788999998873974533525766--4-323456785444--6998779997576588986674189998-6402
Q ss_pred CCCCCCCCCCEEEEEEHHHHCCCCCCCEEEECCCCCCCCHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCE
Q ss_conf 12388778750146641000355653444312323542110111102345089987678888998899976199637715
Q 001850 919 YEEGEDAEYSTLAKVELKKMFKGKSIKQLKEMSLSANQEKLEMKKMTWKVEGESGKTHSPVRGGPLDASTLVVELGPMEI 998 (1005)
Q Consensus 919 ~~~~~~~~~s~~~~~~l~~~f~~~~~~~~~E~sLt~~~~~~~~~r~~w~~~~~~~~~~~~~~~~~~~~~~~~v~l~P~eI 998 (1005)
|+++++.. +.+++++|.++|.. +.+++||||+|++.++++. +...|+|.||||
T Consensus 984 ~~~~~~~~-s~~~~~~l~~lf~~--i~~~~etsL~~~~~~~~~~------------------------~~~~v~l~Pmei 1036 (1045)
T 3bvx_A 984 LMQCGTPE-EHTQKLDVCHLLPN--VARCERTTLTFLQNLEHLD------------------------GMVAPEVCPMET 1036 (1045)
T ss_dssp CCCCSCCC-CCCCCCCGGGSSSS--EEEEEEECTTSCSEEEECG------------------------GGCCCCCCTTCE
T ss_pred CCCCCCCC-CCCCCCCHHHHHCC--CCEEEEECCCCCCCCCCCC------------------------CCCCEEECCCEE
T ss_conf 21476755-67662239997347--3539994443776564447------------------------876168717644
Q ss_pred EEEEEEC
Q ss_conf 6999999
Q 001850 999 RTFLLKF 1005 (1005)
Q Consensus 999 rTf~i~~ 1005 (1005)
|||+|+|
T Consensus 1037 rTf~i~~ 1043 (1045)
T 3bvx_A 1037 AAYVSSH 1043 (1045)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
T ss_conf 8999996
No 2
>2wyh_A Alpha-mannosidase; hydrolase, glycosidase, glycoside hydrolase; 1.90A {Streptococcus pyogenes} PDB: 2wyi_A*
Probab=1.00 E-value=1 Score=1139.92 Aligned_cols=816 Identities=16% Similarity=0.187 Sum_probs=654.4
Q ss_pred ECCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC-EEEECHHHHHHHHHH
Q ss_conf 2489873478119999935356897216477643157764213669999999999998199982-999315789999950
Q 001850 30 YNTGAGVVAGKLNVHLVAHSHDDVGWLKTVDQYYVGSNNSIQSACVENVLDSVVEALRRDPNRK-FVFAEMAFFHRWWVG 108 (1005)
Q Consensus 30 ~~~~~~~~~~~~~v~lvpHSH~D~gWl~t~~~y~~~~~~~~~~~~v~~il~~vi~~L~~~p~~k-F~~~e~~~~~~ww~~ 108 (1005)
|++|+..++++++||+|||||+|+|||||+++|+. ++.++|++|+++|+++|+++ |+|++++++.+||.+
T Consensus 15 ~~~~~~~~~~~~~v~~v~HsH~D~~Wl~t~~~~~~---------~~~~~~~~vl~~l~~~p~~~~F~~~~q~~~~~~~~~ 85 (923)
T 2wyh_A 15 EVLFQGPAMATKKVHIISHSHWDREWYMAYEQHHM---------RLINLIDDLLEVFQTDPDFHSFHLDGQTIILDDYLK 85 (923)
T ss_dssp HHHSCCCCCCCEEEEEEEBCBCCSSSSSCHHHHHH---------HHHHHHHHHHHHHHHCTTCCCEECTTBTHHHHHHHH
T ss_pred HHCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHH---------HHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHH
T ss_conf 32157888875289997337889300509999999---------999999999999975988746999277999999987
Q ss_pred CCHHHHHHHHHHHHCCCEEEECEEE-EEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHH
Q ss_conf 4907999999999749869991112-121246889688999999899999988099983015428898875668998642
Q 001850 109 QSPEIQEQVRKLVDASQLEFVNGGW-CMHDEATTHYVDMIDQTTLGHHYIKQHFNKTPKAGWQIDPFGHSAVQAYLLGVE 187 (1005)
Q Consensus 109 ~~p~~~~~vk~lV~~GrlE~v~Ggw-v~~Dea~~~~esiI~ql~~G~~~l~~~fG~~p~vgW~iD~FGhs~~~p~ll~~~ 187 (1005)
++|+++++||+||++||||+ ||| ||+|||+++|||+||||++||+|+++ ||+.|++||+|||||||+++|+||+ +
T Consensus 86 ~~p~~~~~vk~lV~~Grlei--G~wYv~~D~~~~~~es~irq~~~G~~~~~~-fG~~~~~~w~pD~FG~s~~lPqil~-~ 161 (923)
T 2wyh_A 86 VRPEREPEIRQAIASGKLRI--GPFYILQDDFLTSSESNVRNMLIGKEDCDR-WGASVPLGYFPDTFGNMGQTPQLML-K 161 (923)
T ss_dssp HCGGGHHHHHHHHHTTSEEC--CSBSSCBCSTTSCHHHHHHHHHHHHHHHHH-HTCCCSSEEESSCSSBCTTHHHHHH-T
T ss_pred HCHHHHHHHHHHHHCCCEEE--EEEEECCCCCCCCHHHHHHHHHHHHHHHHH-CCCCCCEEEECCCCCCCHHHHHHHH-H
T ss_conf 79999999999998599898--411441454669989999999999999998-1999762481489986268999999-7
Q ss_pred CCCCEEEEECCC----HHHH---HHHHHCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 299379983037----7778---753106870369953899999870367626899889999785567999986679888
Q 001850 188 LGFDSVHFARID----YQDR---AKRKEDKSLEVIWRGSKTFGSSSQIFTNAFPVHYSPPSGFHFELTDDFDPVQDNPLL 260 (1005)
Q Consensus 188 ~G~~~~~~~Ri~----~~~k---~~~~~~~~~eF~W~~~~~~~~~s~i~th~~~~~Y~~p~~f~fd~~~~~~p~~~~~~~ 260 (1005)
|||++++++|++ |+++ ..+...+.++|+|+|+| |++||||++|.+|+.|..+ | .
T Consensus 162 ~Gi~~~~~~R~~~~~~~n~~~~~~~~~~~~~~eF~W~g~d----Gs~Ilt~~~p~~Y~~g~~~---------~------~ 222 (923)
T 2wyh_A 162 AGLQAAAFGRGIRPTGFNNQVDTSEKYSSQFSEISWQGPD----NSRILGLLFANWYSNGNEI---------P------T 222 (923)
T ss_dssp TTCCEEEECSSCEECCSSSCCCTTCTTEESSSEEEEECTT----CCEEEEEECTTCTTTTCSC---------C------S
T ss_pred CCCCEEEEEECCCCCCCCCCCCCHHHCCCCCCEEEEECCC----CCEEEEEECCCCCCCCCCC---------C------C
T ss_conf 6997899970235322332222112115888559998899----9828999777776689879---------9------8
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHHC-
Q ss_conf 755589999999999997511159981799603787756437899999999999854-892469985935489998726-
Q 001850 261 DGYNVEQWVNDFIDAALTQANVTRDNHIMWTMGDDFQYQYAESWFKQMDKLIHYVNK-GGRVNALYSTPSLYTEAKNAA- 338 (1005)
Q Consensus 261 ~~~n~~~~~~~~~~~~~~~~~~~~t~~il~~~G~Df~~~~a~~~~~~~~~li~~~N~-~~~~~i~~sT~~~Yf~~v~~~- 338 (1005)
+..|++.+++.+++.+. +.++++++|+|+|+||+|.. +||+++|+++|+ .+.++++|||+++||+++++.
T Consensus 223 ~~~~v~~~~~~~~~~~~---~~~~t~~~l~~~G~D~~~~~-----~~~~~~i~~~n~~~~~~~~~~sT~~~yf~~l~~~~ 294 (923)
T 2wyh_A 223 TEAEARLFWDKKLADAE---RFASTKHLLMMNGCDHQPVQ-----LDVTKAIALANQLYPDYEFVHSCFEDYLADLADDL 294 (923)
T ss_dssp SHHHHHHHHHHHHHHHH---HHCSSSEEEEEECCBTCCCC-----TTHHHHHHHHHHHCTTEEEEECCHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHHHH---HCCCCCEEEEEEECCCCCCC-----HHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHC
T ss_conf 98999999999999998---54888709999603989863-----42999999998548985599879999999987652
Q ss_pred CCCCCCCCCCCC-CCCCCCCCCE---EEEEECCCCHHHHHHHHHHHH-HHHHHHHHHH---CCCCCCCCHHHHHHHHHHH
Q ss_conf 999998667774-4544589730---136512311245798764699-9999987861---8999997227999998743
Q 001850 339 NGPWPLKTDDYF-PYADRRNAYW---TGFFTSRPALKGYVRVLSGFY-LASRQLEFLA---GKKSPGPTTSALGDALGIA 410 (1005)
Q Consensus 339 ~~~~p~~~gDf~-py~~~~~~yw---tG~yTSr~~~K~~~R~~e~~L-~~ae~l~~l~---~~~~~~~~~~~lw~~l~~~ 410 (1005)
...||+++|||+ ||. .+| +|||||||++|+++|++|++| +.||.|.+++ +..++...++++|++|+++
T Consensus 295 ~~~lp~~~GEl~~~~~----~~W~th~G~~tSr~~~K~~nR~~E~~L~~~aE~l~~la~~~g~~yp~~~L~~~Wk~ll~~ 370 (923)
T 2wyh_A 295 PENLSTVQGEITSQET----DGWYTLANTASARIYLKQANTRVSRQLENITEPLAAMAYEVTSTYPHDQLRYAWKTLMQN 370 (923)
T ss_dssp CSCCCEEESCBSCTTS----CSSSSCGGGGGTTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHSCCCHHHHHHHHHHHHTT
T ss_pred CCCCCEECCCCCCCCC----CCCEECCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
T ss_conf 2568543034457555----662114888526899999999999999999999999999728888668999999997562
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 24567789874101489999999999999999999999986176898777999876445676544689988778999808
Q 001850 411 QHHDAVTGTAKQHTTNDYAKRLAIGASEAEVVVSSSLSCLASRKSGHQCTKPASTFSQCPLLNISYCPPTEKGIPEGKNL 490 (1005)
Q Consensus 411 QhHDaItGTs~~~V~~dy~~rl~~a~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ln~s~~~~~~~~~~~~~~~ 490 (1005)
||||+|||||+++|++||..+|.++.+.++.++..+++.|+..... .. . .+++.
T Consensus 371 Q~HD~i~Gts~~~V~~d~~~~~~~~~~~~~~l~~~al~~l~~~~~~----------------------~~---~-~~~~~ 424 (923)
T 2wyh_A 371 HPHDSICGCSVDSVHREMMTRFEKAYEVGHYLAKEAAKQIADAIDT----------------------RD---F-PMDSQ 424 (923)
T ss_dssp CBHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTBCC----------------------TT---S-CTTSE
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC----------------------CC---C-CCCCE
T ss_conf 7876757758779999999999999999999999999999744566----------------------66---7-88840
Q ss_pred EEEEECCCCCEEEEEEEEEEC-------------------------CCCEEEECCCCCEEE-EEEEECCCCCCCCCCHHH
Q ss_conf 999993999504579999965-------------------------983899979998676-999622632221100012
Q 001850 491 VVAAYNPLGWNRTDIIRIPVN-------------------------DANLIVKDPLGNAIN-VQYVNLDNVTSNLRKFYT 544 (1005)
Q Consensus 491 ~i~vfNpl~~~r~~~v~i~v~-------------------------~~~~~v~d~~g~~v~-~Q~~~~~~~~~~~~~~~~ 544 (1005)
.++|||||+|+|+++|++++. ...+.|.|.+|++|| +|+++... ..... +
T Consensus 425 ~vvvfN~l~~~r~~vV~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~d~~G~~v~~~qi~~~~~-~~~~~---~ 500 (923)
T 2wyh_A 425 PFVLFNTSGHSKTSVAELSLTWKKYHFGQRFPKEVYQEAQEYLARLSQSFQIIDTSGQVRPEAEILGTSI-AFDYD---L 500 (923)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEEEEECTTSCHHHHHHHHHHHHHTCCSEEEEECTTCCBCTTCEEEEEEE-EEEEE---C
T ss_pred EEEEECCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEECCCCCEECCEEEEECCC-CCCCC---C
T ss_conf 8999949996475899999972533322234321100001121036787799979989955199985123-44422---5
Q ss_pred HHCCCC-CCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCEECCCCC-CCCCEEECCCEEEEEEECCCCCEEEE
Q ss_conf 010278-8888881899999840998227999996478654222210013799-99823966872899997378737999
Q 001850 545 EAYLGQ-SSKRVPRYWLLFQVTVPPLGWNTYFISRAAGKVKRRKGFFLAADSP-QDKTVEVGPGNLKMSFSRTTGQLKRM 622 (1005)
Q Consensus 545 ~~~~~~-~~~~~~~~~l~f~a~ipplG~~~y~i~~~~~~~~~~~~~~~~~~~~-~~~~~~ieN~~~~i~~d~~~G~l~si 622 (1005)
. .-+. .+.....+++.|.+++|||||++|.|........... . .. ..+..+|||++++|+|| .+|.+ +|
T Consensus 501 ~-~~~~~~~~~~~~~~l~f~a~vP~lG~~~~~i~~~~~~~~~~~-~-----~~~~~~~~~leN~~~~v~~d-~~G~l-si 571 (923)
T 2wyh_A 501 P-KRSFREPYFAIKVRLRLPITLPAMSWKTLALKLGNETTPSET-V-----SLYDDSNQCLENGFLKVMIQ-TDGRL-TI 571 (923)
T ss_dssp C-SSSCCEEEEEEEEEEEEEEEECTTEEEEEEEEEEC------C-C-----CSEETTTTEEECSSEEEEEC-TTSCE-EE
T ss_pred C-CCCCCCCCCEEEEEEEEEEECCCCCEEEEEEEECCCCCCCCC-C-----CCCCCCCCEEECCEEEEEEE-CCCCE-EE
T ss_conf 5-556656531036999999973875008999998887666653-1-----01367872575680899990-89878-99
Q ss_pred EECCCCEEEEEEEEEEEEECCCCCCCCCCCEEECCCCC-CCC-CCCCCCEEEE-ECCCEEEEEEEE--------------
Q ss_conf 93588707756478999612578999786168069996-400-2787429999-657427999994--------------
Q 001850 623 YNSRTGVDVPIQQSFLWYGSMVDTQSSGAYIFRPNGAQ-PNV-VSRSVPIKII-RGPMVDEVHQQF-------------- 685 (1005)
Q Consensus 623 ~dk~~g~~~~~~~~~~~Y~~~~~~~~sgaY~f~p~~~~-~~~-~~~~~~i~v~-~G~l~~~i~~~~-------------- 685 (1005)
+||++|+++. +|.+|++. ++.||||+|+|++.. +.. ......+++. +||++++|++.+
T Consensus 572 ~dk~~gr~~~---~~~~y~d~--~d~~day~f~p~~~~~~~~~~~~~~~i~v~~~gpl~~~v~~~~~~~vP~~~~~~L~~ 646 (923)
T 2wyh_A 572 TDKQSGLIYQ---DLLRFEDC--GDIGNEYISRQPNHDQPFYADQGTIKLNIISNTAQVAELEIQQTFAIPISADKLLQA 646 (923)
T ss_dssp EETTTCCEEE---EESEEEEE--ECCSCSSCCCCCTTCCCEEGGGSEEEEEEEEECSSEEEEEEEEEEEEESSBCTHHHH
T ss_pred EECCCCEEEE---EEEEEEEC--CCCCCEEEEECCCCCCEEECCCCCCEEEEEECCCCEEEEEEEEEECCCCCCHHHHCC
T ss_conf 9978993988---88999605--998870688768887303316787469999868877999999986377430122101
Q ss_pred ---------------CC-----EEEEEEEEEECCCCEEEEEEECCEECCCCCCCEEEEEEEEEECCCCEEEECCCCCCEE
Q ss_conf ---------------25-----3999999952488406999987710458999489999996305896899726774200
Q 001850 686 ---------------NS-----WIYQVTRLYIDKEHAEVEYTIGPIPTEDSVGKEVISRMTANMVTEKVFYTDSNGRDFL 745 (1005)
Q Consensus 686 ---------------~s-----~i~q~irL~~~~~~ie~e~~v~~ip~~~~~~~el~~rf~t~i~s~~~fytDsnG~~~i 745 (1005)
++ +++|+++|++++++|||++.|++. ..+|+++++|+|+|.++..+|+ +||+++
T Consensus 647 ~~~~~~~~~~r~~~~s~~~~~~~i~q~i~L~~~~~~ie~~~~vd~~----~~~~~l~v~fpt~i~s~~~~~d--~~fg~i 720 (923)
T 2wyh_A 647 EMEAVIDITERQARRSQEKAELTLTTLIRMEKNNPRLQFTTRFDNQ----MTNHRLRVLFPTHLKTDHHLAD--SIFETV 720 (923)
T ss_dssp HHHTTCCGGGCCCCBCSCEEEEEEEEEEEEETTCSCEEEEEEEEEC----CCSEEEEEEEECCCCCSEEEEE--ETTEEE
T ss_pred CCCCCCCHHHHHHCCCCCCCCEEEEEEEEEECCCCEEEEEEEECCC----CCCEEEEEEECCCCCCCCEEEE--CCCEEE
T ss_conf 1112220133442346666645899999992899658999998873----3898999990155378977994--586389
Q ss_pred ECCCCCCC-CCCCCCCCCCCCCEEEECCEEEEEECCCEEEEEECCCCCEEEC-CCCEEEEEEEEEE--CCCCCCCCCCCC
Q ss_conf 01246555-6455888874320474131588962882089992577511103-5967999999652--257987623434
Q 001850 746 KRVRDYRA-DWSLQVNEPVAGNYYPLNLGIFITDKKSEFSVLVDRATGGASI-KDGQVEIMLHRRM--LADDGRGVGEAL 821 (1005)
Q Consensus 746 ~R~~~~r~-~w~~~~~~pv~~nyYPv~s~i~I~D~~~~ltvltdr~~G~~sl-~~G~ielmL~Rr~--~~dD~rGv~e~l 821 (1005)
+|+++.++ +|+. ++||||++++++|+|.+.|+||+|||++|++++ .+|+|+|||||++ +.| +|+ +|.
T Consensus 721 ~R~~~~~~~~w~~------a~~~~p~~~~v~l~d~~~gvavlnd~~~g~~~~~~~~~i~LtLlRs~~~lg~--~G~-~p~ 791 (923)
T 2wyh_A 721 KRPNHPDATFWKN------PSNPQHQECFVSLFDGENGVTIGNYGLNEYEILPDTNTIAITLLRSVGEMGD--WGY-FPT 791 (923)
T ss_dssp EEESSCCTTTCCC------SCCCEECSSEEEEECSSEEEEEEESSCCEEEEETTTTEEEEEEEEECSBCCT--TSC-CBC
T ss_pred ECCCCCCCCCCCC------CCCEEEEEEEEEEECCCCCEEEEECCCCCEEEECCCCEEEEEEECCCCCCCC--CCC-CCC
T ss_conf 8268787777656------6641742239999879876899858965368866898499998136532366--776-368
Q ss_pred CCCCCCCCCCCCEEEEEEEEEECCCCCCCCHHC---CCCHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 555322467777057634988304567530010---12013240563343303432222233357666676688899740
Q 001850 822 DESVCVRDNCEGLTVRGNYYLSVNQLGAGARWR---RTTGQEVYSPLLLAFTQEKLETWTESHLTKSTAMESDYSLPLNV 898 (1005)
Q Consensus 822 ~e~~~~~~~~~gl~~~g~~~l~~~~~~~~~~~~---r~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lp~~i 898 (1005)
.+.. .+|+|.+.+....+...++ ++.+++++.|++.+...... ......++.+. .-|++|
T Consensus 792 p~a~----------~~G~h~f~yal~~~~g~~~~~~~~~a~~~~~Pl~~~~~~~~~----~~~~~~~s~l~---~~~~~v 854 (923)
T 2wyh_A 792 PEAQ----------CLGKHSLSYSFESITKQTQFASYWRAQEGQVPVITTQTNQHE----GTLAAEYSYLT---GTNDQV 854 (923)
T ss_dssp GGGG----------CCEEEEEEEEEEEEETTTHHHHHHHHHHTTSCCEEEECCSCC----CSBCSEEESCB---CCCTTE
T ss_pred CHHH----------HCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCHHHEECCCCC----CCCCCCCCCEE---CCCCCE
T ss_conf 3357----------412799999971168864688999999873877513347665----76776665302---289978
Q ss_pred EEEEEEECCC-CCEEEEEECCCCCCCCCCCCEEEEEEHHHHCCCCCCCEEEECCCCCCCCHHHCCCEEEEEECCCCCCCC
Q ss_conf 4899444299-938998740012388778750146641000355653444312323542110111102345089987678
Q 001850 899 ALITLEELDD-GSVLLRLAHLYEEGEDAEYSTLAKVELKKMFKGKSIKQLKEMSLSANQEKLEMKKMTWKVEGESGKTHS 977 (1005)
Q Consensus 899 hlltl~~~~~-~~illRl~~~~~~~~~~~~s~~~~~~l~~~f~~~~~~~~~E~sLt~~~~~~~~~r~~w~~~~~~~~~~~ 977 (1005)
++.+||++++ +.++|||.|..... . +.+.+ .+.+..+.+++|.+... .
T Consensus 855 ~l~alK~aed~~~~ilRl~n~~g~~-~------~~l~~-----~~~~~~~~~~~llE~~~-~------------------ 903 (923)
T 2wyh_A 855 ALTAFKRRLADNALITRSYNLSNDK-T------CDFSL-----SLPNYNAKVTNLLEKDS-K------------------ 903 (923)
T ss_dssp EEEEEEECTTTCCEEEEEEESCSSC-C------EECCC-----BCTTEEEEEECTTCCBC-S------------------
T ss_pred EEEEEEECCCCCCEEEEEECCCCCC-C------EEEEE-----CCCCCEEEEEECCCCCC-C------------------
T ss_conf 9999888168994899972478985-3------17883-----26654399952457504-5------------------
Q ss_pred CCCCCCCCCCCCEEEECCCCEEEEEEEC
Q ss_conf 8889988999761996377156999999
Q 001850 978 PVRGGPLDASTLVVELGPMEIRTFLLKF 1005 (1005)
Q Consensus 978 ~~~~~~~~~~~~~v~l~P~eIrTf~i~~ 1005 (1005)
.+. .++|.|.||+||.+.+
T Consensus 904 -----~~~----~~~l~p~ei~T~~l~~ 922 (923)
T 2wyh_A 904 -----QST----PSQLGKAEILTLAWKK 922 (923)
T ss_dssp -----CCC----CSEECTTCEEEEEEEE
T ss_pred -----CCC----CCEECCCCEEEEEEEE
T ss_conf -----465----1017676148999995
No 3
>3lvt_A Glycosyl hydrolase, family 38; PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.55A {Enterococcus faecalis}
Probab=1.00 E-value=1 Score=1062.07 Aligned_cols=816 Identities=16% Similarity=0.192 Sum_probs=624.4
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEE-CHHHHHHHHHHCCHHHHHH
Q ss_conf 781199999353568972164776431577642136699999999999981999829993-1578999995049079999
Q 001850 38 AGKLNVHLVAHSHDDVGWLKTVDQYYVGSNNSIQSACVENVLDSVVEALRRDPNRKFVFA-EMAFFHRWWVGQSPEIQEQ 116 (1005)
Q Consensus 38 ~~~~~v~lvpHSH~D~gWl~t~~~y~~~~~~~~~~~~v~~il~~vi~~L~~~p~~kF~~~-e~~~~~~ww~~~~p~~~~~ 116 (1005)
+.+.+||+|||||||+|||||+++|+. .+.++|++|+++|+++|+++|++. ++.++.+||.+++|+.+++
T Consensus 4 m~~~~v~~v~HsH~D~~Wl~t~~e~~~---------~~~~~~~~~l~~l~~~p~~~f~~~~~q~~~~~~~~~~~p~~~~~ 74 (899)
T 3lvt_A 4 MTKKKVYIVSHSHWDREWYLPYEEHHM---------RLIELVDNVLDLIENDPEFNSFHLDGQTIILDDYLQVRPEKKEA 74 (899)
T ss_dssp CCCEEEEEEEEECC----CCCHHHHHH---------HHHHHHHHHHHHHHHCTTCCCEECTTBTHHHHHHHHHCGGGHHH
T ss_pred CCCCEEEEECCCCCCHHHCCCHHHHHH---------HHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCHHHHHH
T ss_conf 546509997977788576571999999---------99999999999998699952899804199999998639999999
Q ss_pred HHHHHHCCCEEEECEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCEEEEE
Q ss_conf 99999749869991112121246889688999999899999988099983015428898875668998642299379983
Q 001850 117 VRKLVDASQLEFVNGGWCMHDEATTHYVDMIDQTTLGHHYIKQHFNKTPKAGWQIDPFGHSAVQAYLLGVELGFDSVHFA 196 (1005)
Q Consensus 117 vk~lV~~GrlE~v~Ggwv~~Dea~~~~esiI~ql~~G~~~l~~~fG~~p~vgW~iD~FGhs~~~p~ll~~~~G~~~~~~~ 196 (1005)
||+||++|||| +||+|||+||+++++||+||||++||+|+++ ||+.|++||+||+||||+++|+||+ ++||++++|+
T Consensus 75 vk~lv~~Gr~e-igg~~v~~D~~~~~~es~irq~~~G~~~~~~-fG~~~~~~w~~D~FG~s~~lp~i~~-~~Gi~~~~~~ 151 (899)
T 3lvt_A 75 VKKAVQAGKLK-IGPFYILQDDFLISSESNVRNMLIGHLESQK-WGAPVQLGYFPDTFGNMGQTPQMMQ-LANLPAAAFG 151 (899)
T ss_dssp HHHHHHTTSEE-CCSBSSCCCGGGSCHHHHHHHHHHHHHHHHH-HTCCCCCEEESCCCT---THHHHHH-TTTCCEEEEC
T ss_pred HHHHHHCCCEE-ECCHHCCCCCCCCCHHHHHHHHHHHHHHHHH-CCCCCCEEEECCCCCCCHHHHHHHH-HCCCCEEEEE
T ss_conf 99999849889-7741202655579989999999999999997-3999862372789987367999999-7699749993
Q ss_pred CCC----HHHHHHH--HHCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 037----7778753--1068703699538999998703676268998899997855679999866798887555899999
Q 001850 197 RID----YQDRAKR--KEDKSLEVIWRGSKTFGSSSQIFTNAFPVHYSPPSGFHFELTDDFDPVQDNPLLDGYNVEQWVN 270 (1005)
Q Consensus 197 Ri~----~~~k~~~--~~~~~~eF~W~~~~~~~~~s~i~th~~~~~Y~~p~~f~fd~~~~~~p~~~~~~~~~~n~~~~~~ 270 (1005)
|++ |+..... .....++|+|+|+| |++||||++|.+|+.+... | .+.++++.+++
T Consensus 152 Rg~~~~~~~~~k~~~~~~~p~~~F~W~g~d----Gs~vlt~~~~~~Y~~g~~~---------p------~~~~~~~~~~~ 212 (899)
T 3lvt_A 152 RGVKPIGFDNQVLESDYSSQYSEMWWEGPD----QTKIFGLLFANWYSNGNEI---------P------SEKEAAIAFWK 212 (899)
T ss_dssp ---------------------CEEEEECTT----SCEEEEEECCCC----CCS---------C------SSHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEECCC----CCEEEEEECCCCCCCCCCC---------C------CCHHHHHHHHH
T ss_conf 344544444312211247877469997799----9849999777767676679---------8------76899999999
Q ss_pred HHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHHCC-CCCCCCCCC
Q ss_conf 99999997511159981799603787756437899999999999854-8924699859354899987269-999986677
Q 001850 271 DFIDAALTQANVTRDNHIMWTMGDDFQYQYAESWFKQMDKLIHYVNK-GGRVNALYSTPSLYTEAKNAAN-GPWPLKTDD 348 (1005)
Q Consensus 271 ~~~~~~~~~~~~~~t~~il~~~G~Df~~~~a~~~~~~~~~li~~~N~-~~~~~i~~sT~~~Yf~~v~~~~-~~~p~~~gD 348 (1005)
.+++...+ .++++++|+|+|+|+ ++++++|+++|+++|+ .+.+++++||+++||+++++.. ..||+++||
T Consensus 213 ~~~~~~~~---~~~t~~il~~~G~D~-----~p~~~~l~~~i~~~n~~~p~~~~~~st~~~yf~~l~~~~~~~lp~~~GE 284 (899)
T 3lvt_A 213 QKLADVER---YASTNHLLMMNGVDH-----QPVQRDITKAIALANELFPEYEFIHSNFDDYLKAVQEELPEDLGTVTGE 284 (899)
T ss_dssp HHHHHHHH---HCSSSEEEEEEEEC-----------CHHHHHHHHHHHCSSEEEEECCHHHHHHHHHHTCC--CCEEECC
T ss_pred HHHHHHHH---HCCCCEEEEEECCCC-----CCHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 99998875---068871899546899-----9607889999999973099854997699999999987522337724565
Q ss_pred CC-CCCCCCCCCEE-EEEECCCCHHHHHHHHHHHHH-HHHHHHHHH---CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 74-45445897301-365123112457987646999-999987861---8999997227999998743245677898741
Q 001850 349 YF-PYADRRNAYWT-GFFTSRPALKGYVRVLSGFYL-ASRQLEFLA---GKKSPGPTTSALGDALGIAQHHDAVTGTAKQ 422 (1005)
Q Consensus 349 f~-py~~~~~~ywt-G~yTSr~~~K~~~R~~e~~L~-~ae~l~~l~---~~~~~~~~~~~lw~~l~~~QhHDaItGTs~~ 422 (1005)
|+ +|.++ -||+ |+||||+++|+++|++|++|+ +||.|.+++ +..|+...++++|++|+++||||+|||||++
T Consensus 285 l~~~~~~G--~yt~~~~~sSr~~~K~~nR~~E~~L~~~aE~l~~la~~~g~~yp~~~l~~~Wk~ll~~Q~HD~i~Gtsi~ 362 (899)
T 3lvt_A 285 LTSQETDG--WYTLANTSSARVYLKQWNTKVQRQLENIAEPLAAMAYEVTGDYPHDQFDYAWKTLLQNHPHDSICGCSVD 362 (899)
T ss_dssp C-------------CGGGGBTHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCCCHHHHHHHHHHHHTTCSTTTTTSCSCH
T ss_pred CCCCCCCC--EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCH
T ss_conf 14644586--2797782312799999999999999999999999999737888579999999998463788766775867
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEE
Q ss_conf 01489999999999999999999999986176898777999876445676544689988778999808999993999504
Q 001850 423 HTTNDYAKRLAIGASEAEVVVSSSLSCLASRKSGHQCTKPASTFSQCPLLNISYCPPTEKGIPEGKNLVVAAYNPLGWNR 502 (1005)
Q Consensus 423 ~V~~dy~~rl~~a~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ln~s~~~~~~~~~~~~~~~~i~vfNpl~~~r 502 (1005)
+|++||..+|.++.+.++.+++.+++.|+..... +. .+ .+...++||||++|+|
T Consensus 363 ~V~~d~~~~~~~~~~~~~~l~~~al~~l~~~~~~--------------------~~-----~~-~~~~~v~vfN~l~~~r 416 (899)
T 3lvt_A 363 EVHRGMMTRFENANDVGHFLADEATRQLTEAIDT--------------------SV-----FP-EKAHPFVLFNTSGYQK 416 (899)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTBCC--------------------TT-----SC-TTCEEEEEEECSSSCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--------------------CC-----CC-CCCCEEEEEECCCCEE
T ss_conf 9999999999999999999999999999851566--------------------66-----77-7887799992999603
Q ss_pred EEEEEEEECC----------------------CCEEEECCCCCEEEEEEEECCCCCC-CCCCHHHHHCCCCCCCCCCCEE
Q ss_conf 5799999659----------------------8389997999867699962263222-1100012010278888888189
Q 001850 503 TDIIRIPVND----------------------ANLIVKDPLGNAINVQYVNLDNVTS-NLRKFYTEAYLGQSSKRVPRYW 559 (1005)
Q Consensus 503 ~~~v~i~v~~----------------------~~~~v~d~~g~~v~~Q~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 559 (1005)
+++|++++.. +.+.|.|.+|++||+|+++....+. .++...+ +.+.....+.
T Consensus 417 ~~~V~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~d~~G~~v~~qv~~~~~~~~~~l~~~~~-----~~~~~~~~~~ 491 (899)
T 3lvt_A 417 TEVVTVEVEIERLPFYTGKPEDLYHELKQKATPDYQVIDPTGKAVASRIVKEDVRFGYDLPKDAF-----RQPYMAKYLT 491 (899)
T ss_dssp EEEEEEEEEEEEEEGGGSCHHHHHHHHHHSCCCCEEEECSSSCEECCEEEEEEEEEEECCC----------CEEEEEEEE
T ss_pred EEEEEEEEECCCCCCCCCCCHHHHHHHCCCCCCCEEEECCCCCEEEEEEEECCCCCCCCCCCCCC-----CCCCCCCEEE
T ss_conf 26999998725443233451011000001367854999899999748995145421233565544-----5543121489
Q ss_pred EEEEE-ECCCCCEEEEEEEECCCCCCCCCCCEECCCCCCCCCEEECCCEEEEEEECCCCCEEEEEECCCCEEEEEEEEEE
Q ss_conf 99998-40998227999996478654222210013799998239668728999973787379999358870775647899
Q 001850 560 LLFQV-TVPPLGWNTYFISRAAGKVKRRKGFFLAADSPQDKTVEVGPGNLKMSFSRTTGQLKRMYNSRTGVDVPIQQSFL 638 (1005)
Q Consensus 560 l~f~a-~ipplG~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~ieN~~~~i~~d~~~G~l~si~dk~~g~~~~~~~~~~ 638 (1005)
+.|.+ +||||||++|.|..+....... .+ ....+..+|||++++|+|| .+|.| +|+||.+|+++. .+.
T Consensus 492 l~f~a~~vPalGy~~~~i~~~~~~~~~~--~~----~~~~~~~~leN~~~~v~~d-~~G~l-sl~Dk~~gre~~---~~~ 560 (899)
T 3lvt_A 492 VELSVKEMAPFSWDSFALIQGETKAFEG--SL----LAQPATNEMENEFIQVKIE-NNGSL-TIADKKTGETFS---KLL 560 (899)
T ss_dssp EEEEEEEECTTEEEEEEEEESCCCCCCS--CC----SEETTTTEEECSSEEEEEC-TTSCE-EEEETTTCCEEE---EET
T ss_pred EEEEECCCCCCCCEEEEEEECCCCCCCC--CC----CCCCCCCEEECCCEEEEEC-CCCCE-EEEECCCCEEEE---EEE
T ss_conf 9999467787777799998467666543--21----2356673774573899994-89848-999988990998---778
Q ss_pred EEECCCCCCCCCCCEEECCCCC-CCCCCC-CCCEEE-EECCCEEEEEEEEC----------------------------C
Q ss_conf 9612578999786168069996-400278-742999-96574279999942----------------------------5
Q 001850 639 WYGSMVDTQSSGAYIFRPNGAQ-PNVVSR-SVPIKI-IRGPMVDEVHQQFN----------------------------S 687 (1005)
Q Consensus 639 ~Y~~~~~~~~sgaY~f~p~~~~-~~~~~~-~~~i~v-~~G~l~~~i~~~~~----------------------------s 687 (1005)
.|++. ++.|++|+|.|...+ +..... ...+++ ++||++++|++.+. +
T Consensus 561 ~~~d~--gd~g~~Y~~~p~~~d~~~~~~~~~~~v~v~e~gpl~~~v~v~~~~~~P~~~~~~~~~~~~~~~~~~~r~~~~S 638 (899)
T 3lvt_A 561 TFEDT--GDIGNEYIFFKPTEDQGITTENVTAEITNKENSPVKASYQIKQTVMLPVAADERLEEEQKAVREFRERLAQRS 638 (899)
T ss_dssp EEEEE--ECCSBTTBCCCCTTCCCEESTTCCCEEEEEEECSSEEEEEEEEEEEEESSBCTHHHHHHHTTCCGGGCCCCBC
T ss_pred EEECC--CCCCCCEEECCCCCCCEEECCCCCCEEEEEECCCCEEEEEEEEEECCCCCHHHHHCCCCCCCCCCHHHHHCCC
T ss_conf 99537--8878843655876782244467773399997588889999999981564312321000011110001220456
Q ss_pred ------EEEEEEEEEECCCCEEEEEEECCEECCCCCCCEEEEEEEEEECCCCEEEECCCCCCEEECCCCCCCCCCCCCCC
Q ss_conf ------39999999524884069999877104589994899999963058968997267742000124655564558888
Q 001850 688 ------WIYQVTRLYIDKEHAEVEYTIGPIPTEDSVGKEVISRMTANMVTEKVFYTDSNGRDFLKRVRDYRADWSLQVNE 761 (1005)
Q Consensus 688 ------~i~q~irL~~~~~~ie~e~~v~~ip~~~~~~~el~~rf~t~i~s~~~fytDsnG~~~i~R~~~~r~~w~~~~~~ 761 (1005)
+++|+++|++++++|+|++.|++. ..+|+++++|+++|.++.++|++++| +++|+++.+++|+
T Consensus 639 ~~~~~~~i~q~i~L~~~~~~id~~~~Vdw~----~~~~~Lrv~Fp~~i~s~~~~~d~~fG--~i~Rpt~~~t~We----- 707 (899)
T 3lvt_A 639 TTLRPFEITTMVTMIKESNQLFFETTINNQ----IKDHRLRVLFPTGMVTETHEADSIYE--VVTRPNQVSDTWE----- 707 (899)
T ss_dssp SCEEEEEEEEEEEEETTCCCEEEEEEEEEC----CCSEEEEEEECCSCCCSEEEEECSSS--EEEEEC------------
T ss_pred CCCCCEEEEEEEEEECCCCEEEEEEEECCC----CCCEEEEEECCCCCCCCCEEEECCCE--EEECCCCCCCCCC-----
T ss_conf 555516899999993799779999998787----58989999887877768558842646--9987899976665-----
Q ss_pred CCCCCEEEECCEEEEEECCCEEEEEECCCCCEEECCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEE
Q ss_conf 74320474131588962882089992577511103596799999965225798762343455532246777705763498
Q 001850 762 PVAGNYYPLNLGIFITDKKSEFSVLVDRATGGASIKDGQVEIMLHRRMLADDGRGVGEALDESVCVRDNCEGLTVRGNYY 841 (1005)
Q Consensus 762 pv~~nyYPv~s~i~I~D~~~~ltvltdr~~G~~sl~~G~ielmL~Rr~~~dD~rGv~e~l~e~~~~~~~~~gl~~~g~~~ 841 (1005)
.+.++||+.++++|+|.+.|++|+|||++|+.+..+|+|+|||+|+...--..|+-... +. +|.|. ..|.
T Consensus 708 -~a~~e~~~~~~vdlsd~~~Gvavlnd~~~gy~v~~d~~i~LTLlRs~g~lG~~g~~p~P-da-----~~~G~---h~F~ 777 (899)
T 3lvt_A 708 -NPTNPQHQQAFVNVHDQNKGVTIFNEGLNEYEVLADGTIAVTLIRCVGELGDWGYFATP-EA-----QCQGE---YTFK 777 (899)
T ss_dssp -CCCCCEECSSEEEEECSSCEEEEEESSCCEEEECTTCCEEEEEEEECSBCCTTSCCBCG-GG-----GCCEE---EEEE
T ss_pred -CCCCCEEEEEEEEEECCCCEEEEEECCCCCEEECCCCEEEEEEECCCCCCCCCCCCCCC-CH-----HHHCC---EEEE
T ss_conf -78765310149998669824999968975435767987999984146765546775896-63-----65185---6999
Q ss_pred EECCCCCC--CCHHCCCCHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCC-CCEEEEEECC
Q ss_conf 83045675--30010120132405633433034322222333576666766888997404899444299-9389987400
Q 001850 842 LSVNQLGA--GARWRRTTGQEVYSPLLLAFTQEKLETWTESHLTKSTAMESDYSLPLNVALITLEELDD-GSVLLRLAHL 918 (1005)
Q Consensus 842 l~~~~~~~--~~~~~r~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lp~~ihlltl~~~~~-~~illRl~~~ 918 (1005)
.-+-++.. ...-.-+.+++++.|+..+...... ......+|.+. .-++++.+.++|+.++ +.++||+
T Consensus 778 yal~ph~g~~~~~~~~~~a~~~n~pl~~~~~~~~~----~~l~~~~s~~~---~~~~~v~lsavK~aEd~~~~IlRl--- 847 (899)
T 3lvt_A 778 YGLSLHGKPEERFATYQQAYSAQIPFTAATTARHE----GKLAPNHVYLT---TAEGPIGWTAVKRQEQTNHLVVRG--- 847 (899)
T ss_dssp EEEEEESSGGGHHHHHHHHHHHTSCCEEEECCSCC----CSBCSEEESEE---CCCSSEEEEEEEECTTTCCEEEEE---
T ss_pred EEEEECCCCCHHHHHHHHHHHHCCCCCEEECCCCC----CCCCCCCCCEE---ECCCCEEEEEEEEEECCCCEEEEE---
T ss_conf 99995479712548999999864984224426566----76777666436---479989999988614399689999---
Q ss_pred CCCCCCCCCCEEEEEEHHHHCCCCCCCEEEECCCCCCCCHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCE
Q ss_conf 12388778750146641000355653444312323542110111102345089987678888998899976199637715
Q 001850 919 YEEGEDAEYSTLAKVELKKMFKGKSIKQLKEMSLSANQEKLEMKKMTWKVEGESGKTHSPVRGGPLDASTLVVELGPMEI 998 (1005)
Q Consensus 919 ~~~~~~~~~s~~~~~~l~~~f~~~~~~~~~E~sLt~~~~~~~~~r~~w~~~~~~~~~~~~~~~~~~~~~~~~v~l~P~eI 998 (1005)
|+.... .+++.+. |. .+..+.+++|.... .. + .....+.+.|.||
T Consensus 848 ye~~g~-----~~~l~~~--~~--~~~~~~~~nllE~~-~~----------~---------------~~~~~~~~~pfeI 892 (899)
T 3lvt_A 848 FNLTAQ-----NIPCELH--KE--TQPATCLTNVLEEP-LT----------P---------------AIEVDAPLRPFEI 892 (899)
T ss_dssp EECSSS-----CBCCCCE--ET--TEECCEEECTTSCB-CS----------S---------------CCCTTSCBCTTCE
T ss_pred ECCCCC-----CEEEEEC--CC--CCCCEEEECCCCCC-CC----------C---------------CCCEEEEECCCEE
T ss_conf 718999-----6778974--47--65516880056665-66----------7---------------8602442757058
Q ss_pred EEEEEE
Q ss_conf 699999
Q 001850 999 RTFLLK 1004 (1005)
Q Consensus 999 rTf~i~ 1004 (1005)
+||+|+
T Consensus 893 ~T~~~~ 898 (899)
T 3lvt_A 893 RTWRFE 898 (899)
T ss_dssp EEEEEC
T ss_pred EEEEEE
T ss_conf 999970
No 4
>1o7d_A Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: c.6.2.1
Probab=1.00 E-value=1 Score=612.97 Aligned_cols=293 Identities=46% Similarity=0.860 Sum_probs=281.8
Q ss_pred EECCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHH
Q ss_conf 32489873478119999935356897216477643157764213669999999999998199982999315789999950
Q 001850 29 KYNTGAGVVAGKLNVHLVAHSHDDVGWLKTVDQYYVGSNNSIQSACVENVLDSVVEALRRDPNRKFVFAEMAFFHRWWVG 108 (1005)
Q Consensus 29 ~~~~~~~~~~~~~~v~lvpHSH~D~gWl~t~~~y~~~~~~~~~~~~v~~il~~vi~~L~~~p~~kF~~~e~~~~~~ww~~ 108 (1005)
+|++|+.+++++++||+|||||+|+||+||+++|++|+++.||.+.+.++|++++++|+++|++||+|+|+++|.+||++
T Consensus 2 ~~~~~~~~~~~~~~v~~v~HsH~D~gWl~t~~e~~~~~~~~i~~~~~~~~~~~vl~~l~~~p~~~F~~~e~~~~~~w~~~ 81 (298)
T 1o7d_A 2 GYKTCPKVKPDMLNVHLVPHTHDDVGWLKTVDQYFYGIYNNIQPAGVQYILDSVISSLLANPTRRFIYVEIAFFSRWWRQ 81 (298)
T ss_dssp CCTTCCCCCSSSEEEEEEEBCBCCSSSSSCHHHHHHTCCTTTCCCCHHHHHHHHHHHHHHCTTCCEEECCHHHHHHHHHT
T ss_pred CCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH
T ss_conf 87678877887527999577888513345498860164303678999999999999998789976999651676999996
Q ss_pred CCHHHHHHHHHHHHCCCEEEECEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCC--CCEEEECCCCCCCHHHHHHHHH
Q ss_conf 49079999999997498699911121212468896889999998999999880999--8301542889887566899864
Q 001850 109 QSPEIQEQVRKLVDASQLEFVNGGWCMHDEATTHYVDMIDQTTLGHHYIKQHFNKT--PKAGWQIDPFGHSAVQAYLLGV 186 (1005)
Q Consensus 109 ~~p~~~~~vk~lV~~GrlE~v~Ggwv~~Dea~~~~esiI~ql~~G~~~l~~~fG~~--p~vgW~iD~FGhs~~~p~ll~~ 186 (1005)
++|+.+++||+||++|||||+||||||+|||++++||+||||++||+|++++||+. |++||+|||||||+++|+||+
T Consensus 82 ~~Pe~~~~vk~lV~~Grle~vgG~wve~D~~~~~~eslirQl~~G~~~~~~~fG~~~~~~~~W~pD~FG~s~~lP~il~- 160 (298)
T 1o7d_A 82 QTNATQKIVRELVRQGRLEFANGGWVMNDEATTHYGAIIDQMTLGLRFLEETFGSDGRPRVAWHIDPFGHSREQASLFA- 160 (298)
T ss_dssp SCHHHHHHHHHHHHTTSEEESSCSSSCBCSSSCCHHHHHHHHHHHHHHHHHHHGGGGCCSEEEESSSSSCCHHHHHHHH-
T ss_pred CCHHHHHHHHHHHHCCCEEEECCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHH-
T ss_conf 5999999999999779889978532133457899899999999999999998499878864684789986678999999-
Q ss_pred HCCCCEEEEECCCHHHHHHHHHCCCCEEEEECCCCCC-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 2299379983037777875310687036995389999-987036762689988999978556799998667988875558
Q 001850 187 ELGFDSVHFARIDYQDRAKRKEDKSLEVIWRGSKTFG-SSSQIFTNAFPVHYSPPSGFHFELTDDFDPVQDNPLLDGYNV 265 (1005)
Q Consensus 187 ~~G~~~~~~~Ri~~~~k~~~~~~~~~eF~W~~~~~~~-~~s~i~th~~~~~Y~~p~~f~fd~~~~~~p~~~~~~~~~~n~ 265 (1005)
++||++++++|++|++++.+...+.+||+|+|+++++ .|++||||++|.+|++|.+||||..|.++|++++|.++++|+
T Consensus 161 ~~Gi~~~~~~R~~~~~~~~~~~~~~~eF~W~g~~~~~~dgs~i~t~~~~~~Y~~~~g~~fd~~~~~~p~~~~~~~~~~nv 240 (298)
T 1o7d_A 161 QMGFDGFFFGRLDYQDKKVRKKTLQMEQVWRASTSLKPPTADLFTSVLPNMYNPPEGLCWDMLCADKPVVEDTRSPEYNA 240 (298)
T ss_dssp HHTCCEEEESCCCHHHHHHHHHTTCSEEEEECCSSSCTTTTEEEEEECSSTTSCCTTCCCSTTCCCCCCCCCTTSTTCCH
T ss_pred HCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 75998699983340000001457883389878988789999689997278878988762345667767467741147799
Q ss_pred HHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEE
Q ss_conf 999999999999751115998179960378775643789999999999985489246
Q 001850 266 EQWVNDFIDAALTQANVTRDNHIMWTMGDDFQYQYAESWFKQMDKLIHYVNKGGRVN 322 (1005)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~t~~il~~~G~Df~~~~a~~~~~~~~~li~~~N~~~~~~ 322 (1005)
++|++.|+++++++|+.|+|++||+|+|+||+|.+|..||.||++||+++|++..++
T Consensus 241 ~~r~~~~~~~~~~~a~~~~t~~vl~p~G~Df~~~~a~~~f~n~~~li~~iN~~~~~~ 297 (298)
T 1o7d_A 241 KELVRYFLKLATDQGKLYRTKHTVMTMGSDFQYENANTWFKNLDKLIQLVNAQQRAN 297 (298)
T ss_dssp HHHHHHHHHHHHHHHTTSSSSEEEEEECCBTCCTTHHHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 999999999999987505788377226788786406689988999999996067568
No 5
>1o7d_D Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6
Probab=1.00 E-value=1 Score=483.99 Aligned_cols=269 Identities=42% Similarity=0.749 Sum_probs=251.3
Q ss_pred CEEECCCEEEEEEECCCCCEEEEEECCCCEEEEEEEEEEEEECCCC----CCCCCCCEEECCCCCCCCCCCCCCEEEEEC
Q ss_conf 2396687289999737873799993588707756478999612578----999786168069996400278742999965
Q 001850 600 TVEVGPGNLKMSFSRTTGQLKRMYNSRTGVDVPIQQSFLWYGSMVD----TQSSGAYIFRPNGAQPNVVSRSVPIKIIRG 675 (1005)
Q Consensus 600 ~~~ieN~~~~i~~d~~~G~l~si~dk~~g~~~~~~~~~~~Y~~~~~----~~~sgaY~f~p~~~~~~~~~~~~~i~v~~G 675 (1005)
.+.|+|.++++.||+.+|.|+++.++++|.+..+.++|.+|.+... .+.||||+|+|++.++.++.....+.+.+|
T Consensus 2 ~~~i~n~~~~l~fd~~tG~L~si~~~~~g~~~~v~q~f~~Y~s~~g~~~~~~~SGAYiFrP~g~~~~~~~~~~~~~v~~G 81 (282)
T 1o7d_D 2 DLVIQNEYLRARFDPNTGLLMELENLEQNLLLPVRQAFYWYNASTGNNLSSQASGAYIFRPNQNKPLFVSHWAQTHLVKA 81 (282)
T ss_dssp CCEEECSSEEEEECTTTCSEEEEEEC---CEEECEEEEEEEEBCCCBTTBSCCCCSSCCCBSSSSCEESCSCCEEEEEEC
T ss_pred CEEECCCEEEEEECCCCCCEEEEEECCCCEEEEEEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEEEC
T ss_conf 57870765999988999868999986788088776789999534688877888726896579987743378847999979
Q ss_pred CCEEEEEEEECCEEEEEEEEEECCCCEEEEEEECCEECCCCCCCEEEEEEEEEECCCCEEEECCCCCCEEECCCCCCCCC
Q ss_conf 74279999942539999999524884069999877104589994899999963058968997267742000124655564
Q 001850 676 PMVDEVHQQFNSWIYQVTRLYIDKEHAEVEYTIGPIPTEDSVGKEVISRMTANMVTEKVFYTDSNGRDFLKRVRDYRADW 755 (1005)
Q Consensus 676 ~l~~~i~~~~~s~i~q~irL~~~~~~ie~e~~v~~ip~~~~~~~el~~rf~t~i~s~~~fytDsnG~~~i~R~~~~r~~w 755 (1005)
|++++|++.++.|++|++|||++..++|++|.|+|||+++..|+|+++||.|+|+|+++||||+||+||++|++++|++|
T Consensus 82 ~lv~eV~~~~~~~~sq~~Rly~~~~~vE~e~~Vgpipi~d~~~kEiv~r~~T~i~s~~~FYTDsNG~e~~kR~~~~r~~~ 161 (282)
T 1o7d_D 82 SLVQEVHQNFSAWCSQVVRLYPRQRHLELEWTVGPIPVGDGWGKEVISRFDTALATRGLFYTDSNGREILERRRNYRPTW 161 (282)
T ss_dssp SSCEEEEEEEETTEEEEEEECTTCSSEEEEEEECCCCCTTSCCEEEEEEEECCCCCTTEEEEESTTSSEEEEETTCCSSS
T ss_pred CEEEEEEEEECCCEEEEEEEECCCCEEEEEEEECCCCCCCCCCCEEEEEEEEEECCCCEEEECCCCCEEEEEEECCCCCC
T ss_conf 89999999978968999999368953899999855113688884899999855156996889789803057882456565
Q ss_pred CCCCCCCCCCCEEEECCEEEEEECCCEEEEEECCCCCEEECCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 55888874320474131588962882089992577511103596799999965225798762343455532246777705
Q 001850 756 SLQVNEPVAGNYYPLNLGIFITDKKSEFSVLVDRATGGASIKDGQVEIMLHRRMLADDGRGVGEALDESVCVRDNCEGLT 835 (1005)
Q Consensus 756 ~~~~~~pv~~nyYPv~s~i~I~D~~~~ltvltdr~~G~~sl~~G~ielmL~Rr~~~dD~rGv~e~l~e~~~~~~~~~gl~ 835 (1005)
+.+.++|+++|||||+++|+|+|.+.+|+|++||++||+|+++|+||||||||+++||+|||||+|+|+ ++|++
T Consensus 162 ~~~~~~pv~gNYYPv~s~~~IqD~~~rltvl~drs~G~sSl~~G~lElMlhRRl~~DD~rGvge~l~d~------~~gl~ 235 (282)
T 1o7d_D 162 KLNQTEPVAGNYYPVNSRIYITDGNMQLTVLTDRSQGGSSLRDGSLELMVHRRLLKDDARGVGEPLNKE------GSGLW 235 (282)
T ss_dssp CCCCSCTTGGGCEEESSEEEEECSSEEEEEEESSCEEECCSSTTEEEEEEEEECSSCCSSSCCSCSCCC------GGGGS
T ss_pred CCCCCCCCCCCEEEEEEEEEEECCCEEEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCC------CCCEE
T ss_conf 434356765636500127999828828999963356330068975999986340446632115443455------88808
Q ss_pred EEEEEEEECCCCCCCCHHCCCCHHHHCCCCEEEEECCCC
Q ss_conf 763498830456753001012013240563343303432
Q 001850 836 VRGNYYLSVNQLGAGARWRRTTGQEVYSPLLLAFTQEKL 874 (1005)
Q Consensus 836 ~~g~~~l~~~~~~~~~~~~r~~~~~l~~p~~~~~~~~~~ 874 (1005)
++|+|||+|++......++|..++++++||+++|+..+.
T Consensus 236 v~g~~~l~l~~~~~~~~~~r~~~~~~~~p~~~~fs~~~~ 274 (282)
T 1o7d_D 236 VRGRHLVLLDKKETAAARHRLQAEMEVLAPQVVLAQGGG 274 (282)
T ss_dssp EEEEEEEEEEEHHHHHHHHHHHHHHHHSCCEEEEEEC--
T ss_pred EEEEEEEEEECCCCCHHHHHHHHHHHHCCHHHHEECCCC
T ss_conf 889999998086432134347888664850620104787
No 6
>1o7d_C Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 b.30.5.6
Probab=1.00 E-value=1 Score=226.48 Aligned_cols=150 Identities=37% Similarity=0.646 Sum_probs=132.8
Q ss_pred CHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 22799999874324567789874101489999999999999999999999986176898777999876445676544689
Q 001850 399 TTSALGDALGIAQHHDAVTGTAKQHTTNDYAKRLAIGASEAEVVVSSSLSCLASRKSGHQCTKPASTFSQCPLLNISYCP 478 (1005)
Q Consensus 399 ~~~~lw~~l~~~QhHDaItGTs~~~V~~dy~~rl~~a~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ln~s~~~ 478 (1005)
.++++|++|+++||||+||||++++|++||..||..+++.++.+++.+++.|+... .+|..|.++|++.|+
T Consensus 2 ~L~~~~k~l~~~QhHDaItGts~~~V~~Dy~~rl~~~~~~~~~l~~~~l~~L~~~~---------~~~~~~~~ln~~~~~ 72 (159)
T 1o7d_C 2 DSAPLNEAMAVLQHHDAVSGTSRQHVANDYARQLSEGWRPCEVLMSNALAHLSGLK---------EDFAFCRKLNISICP 72 (159)
T ss_dssp CSHHHHHHHHHTTBTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---------SCEECCTTGGGTCCH
T ss_pred HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---------CCCCCCCCCCCCCCC
T ss_conf 28999998747255776775575799999999999999999999999999985486---------544423433333176
Q ss_pred CCCCCCCCCCEEEEEEECCCCCEEEEEEEEEECCCCEEEECCCCCEEEEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCE
Q ss_conf 98877899980899999399950457999996598389997999867699962263222110001201027888888818
Q 001850 479 PTEKGIPEGKNLVVAAYNPLGWNRTDIIRIPVNDANLIVKDPLGNAINVQYVNLDNVTSNLRKFYTEAYLGQSSKRVPRY 558 (1005)
Q Consensus 479 ~~~~~~~~~~~~~i~vfNpl~~~r~~~v~i~v~~~~~~v~d~~g~~v~~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 558 (1005)
.++ .++...++|||||+|+|+++|+++|+.+.+.|.|.+|++|++|+++.+.. ..+
T Consensus 73 ~~~----~~~~~~vvvfN~l~~~r~~~V~v~v~~~~~~v~d~~G~~v~~qi~~~~~~--------------------~~~ 128 (159)
T 1o7d_C 73 LTQ----TAERFQVIVYNPLGRKVDWMVRLPVSKHVYLVKDPGGKIVPSDVVTIPSS--------------------DSQ 128 (159)
T ss_dssp HHH----HCSEEEEEEEECSSSCEEEEEEEEECSSCEEEECSSSCEECCEEEEETTT--------------------TEE
T ss_pred CCC----CCCCEEEEEECCCCCEEEEEEEEEECCCCEEEECCCCCEEEEEEEECCCC--------------------CCE
T ss_conf 656----77647999998998617479999986886899959979953699965688--------------------844
Q ss_pred EEEEEEECCCCCEEEEEEEECCC
Q ss_conf 99999840998227999996478
Q 001850 559 WLLFQVTVPPLGWNTYFISRAAG 581 (1005)
Q Consensus 559 ~l~f~a~ipplG~~~y~i~~~~~ 581 (1005)
+|.|.++||||||++|.|..++.
T Consensus 129 ~l~f~a~vP~lG~~ty~i~~~~~ 151 (159)
T 1o7d_C 129 ELLFSALVPAVGFSIYSVSQMPN 151 (159)
T ss_dssp EEEEEEEECTTEEEEEEEEECC-
T ss_pred EEEEEEECCCCEEEEEEEEECCC
T ss_conf 99999640886418999997899
No 7
>1o7d_E Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6
Probab=1.00 E-value=1 Score=194.03 Aligned_cols=116 Identities=31% Similarity=0.518 Sum_probs=101.9
Q ss_pred CCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCC--CCCEEEEEEHHHHCCCCCCCEEEECCCCCCCCHHH
Q ss_conf 7666676688899740489944429993899874001238877--87501466410003556534443123235421101
Q 001850 883 TKSTAMESDYSLPLNVALITLEELDDGSVLLRLAHLYEEGEDA--EYSTLAKVELKKMFKGKSIKQLKEMSLSANQEKLE 960 (1005)
Q Consensus 883 ~~~~~l~~~~~lp~~ihlltl~~~~~~~illRl~~~~~~~~~~--~~s~~~~~~l~~~f~~~~~~~~~E~sLt~~~~~~~ 960 (1005)
++|+++.. +||+||||+||++|+++++|||++|+|++++|+ .+|+|++|+|+++|..++|.+++||+|+||+++++
T Consensus 3 ~~~s~l~~--~LP~nvhLlTLe~~~~~~iLlRl~hl~e~~ed~~~~~s~pv~v~l~~lF~~~~i~~i~EttLtgn~~~~~ 80 (126)
T 1o7d_E 3 TQFSGLRR--ELPPSVRLLTLARWGPETLLLRLEHQFAVGEDSGRNLSSPVTLDLTNLFSAFTITNLRETTLAANQLLAY 80 (126)
T ss_dssp CEECSBSS--CCCTTCEEEEEEEEETTEEEEEEECCCCTTTTTTTTCSSCEEEECSSSBSSSEEEEEEEECTTSSSBGGG
T ss_pred CCCCCCCC--CCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCEEEEHHHHHCCCCCCEEEEECCCCCCCCCC
T ss_conf 55476333--4998286789898689969999772042566754335751688589951506413699973636645210
Q ss_pred CCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEC
Q ss_conf 111023450899876788889988999761996377156999999
Q 001850 961 MKKMTWKVEGESGKTHSPVRGGPLDASTLVVELGPMEIRTFLLKF 1005 (1005)
Q Consensus 961 ~~r~~w~~~~~~~~~~~~~~~~~~~~~~~~v~l~P~eIrTf~i~~ 1005 (1005)
++|++|++++.... .+ .+++.+.+.|+|+|||||||+|++
T Consensus 81 ~~Rl~w~~~~~~~~----~~-~~~~~~~~~vtL~PmEIRTFii~~ 120 (126)
T 1o7d_E 81 ASRLQWTTDTGPTP----HP-SPSRPVSATITLQPMEIRTFLASV 120 (126)
T ss_dssp CCCCCCCBC-------------------CEEEECTTCEEEEEEEE
T ss_pred CCCCCCCCCCCCCC----CC-CCCCCCCCEEEECCCCEEEEEEEE
T ss_conf 01010234787754----55-665777765997686079999998
No 8
>1k1x_A 4-alpha-glucanotransferase; 2.40A {Thermococcus litoralis} SCOP: a.8.3.2 b.30.5.8 c.6.2.2 PDB: 1k1w_A 1k1y_A*
Probab=1.00 E-value=1 Score=178.04 Aligned_cols=253 Identities=15% Similarity=0.173 Sum_probs=170.5
Q ss_pred CCEEEEEEECCCCCCC-CHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHCCHHHHHHH
Q ss_conf 8119999935356897-216477643157764213669999999999998199982999315789999950490799999
Q 001850 39 GKLNVHLVAHSHDDVG-WLKTVDQYYVGSNNSIQSACVENVLDSVVEALRRDPNRKFVFAEMAFFHRWWVGQSPEIQEQV 117 (1005)
Q Consensus 39 ~~~~v~lvpHSH~D~g-Wl~t~~~y~~~~~~~~~~~~v~~il~~vi~~L~~~p~~kF~~~e~~~~~~ww~~~~p~~~~~v 117 (1005)
++.+|.+|.|+|.|.+ |.|.+++ .+...+..+++.|+++|++||...-...+..|+++.+|+..+++
T Consensus 2 ~~~~l~lv~H~HqP~~~~~~~~e~------------a~~~~Y~pll~ll~~~~~~k~~~~~s~~ll~~l~~~~p~l~~~i 69 (659)
T 1k1x_A 2 ERINFIFGIHNHQPLGNFGWVFEE------------AYNRSYRPFMEILEEFPEMKVNVHFSGPLLEWIEENKPDYLDLL 69 (659)
T ss_dssp CCEEEEEEEEECCCTTCCHHHHHH------------HHHHTHHHHHHHHTTCTTCCEEEEECHHHHHHHHHHCHHHHHHH
T ss_pred CCEEEEEEEECCCCCCCCCHHHHH------------HHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCHHHHHHH
T ss_conf 836999999821798667078999------------99999999999998587957999866999999998797999999
Q ss_pred HHHHHCCCEEEECEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCEEEEEC
Q ss_conf 99997498699911121212468896889999998999999880999830154288988756689986422993799830
Q 001850 118 RKLVDASQLEFVNGGWCMHDEATTHYVDMIDQTTLGHHYIKQHFNKTPKAGWQIDPFGHSAVQAYLLGVELGFDSVHFAR 197 (1005)
Q Consensus 118 k~lV~~GrlE~v~Ggwv~~Dea~~~~esiI~ql~~G~~~l~~~fG~~p~vgW~iD~FGhs~~~p~ll~~~~G~~~~~~~R 197 (1005)
|+++++||+|+++|+|+.++.++++.|++++|+..|.++++ .||++|+..|.||. ++++.+|++++ ++||+++++..
T Consensus 70 k~l~~~G~vE~l~~~~~Hpi~~l~p~e~~~~QI~~g~~~~~-~FG~~P~G~WlPE~-~ys~~l~~iL~-~~Gi~y~~td~ 146 (659)
T 1k1x_A 70 RSLIKRGQLEIVVAGFYEPVLAAIPKEDRLVQIEMLKDYAR-KLGYDAKGVWLTER-VWQPELVKSLR-EAGIEYVVVDD 146 (659)
T ss_dssp HHHHHTTCEEEEBCCTTCCCGGGSCHHHHHHHHHHHHHHHH-HTTCCCCEEECGGG-CBCTTHHHHHH-HTTCCEEEEEH
T ss_pred HHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH-HCCCCCCEEECCCC-CCCHHHHHHHH-HCCCCEEEECC
T ss_conf 99998799999836740001458999999999999999999-74997888987623-56766999999-86993999873
Q ss_pred CCHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 37777875310687036995389999987036762689988999978556799998667988875558999999999999
Q 001850 198 IDYQDRAKRKEDKSLEVIWRGSKTFGSSSQIFTNAFPVHYSPPSGFHFELTDDFDPVQDNPLLDGYNVEQWVNDFIDAAL 277 (1005)
Q Consensus 198 i~~~~k~~~~~~~~~eF~W~~~~~~~~~s~i~th~~~~~Y~~p~~f~fd~~~~~~p~~~~~~~~~~n~~~~~~~~~~~~~ 277 (1005)
-+-......+...-..++... . |..|-... ..+ . +....| +. .++.+++.+.
T Consensus 147 ~~~~~~~~~p~~~~~py~~~~-~----g~~i~vf~-rd~---~-------Lsd~i~---------f~---~a~~~~~~L~ 198 (659)
T 1k1x_A 147 YHFMSAGLSKEELFWPYYTED-G----GEVITVFP-IDE---K-------LRYLIP---------FR---PVKKTIEYLE 198 (659)
T ss_dssp HHHHHHTCCGGGCSSCEEEEE-T----TEEEEEEE-ECH---H-------HHHHTT---------TS---CHHHHHHHHH
T ss_pred HHHCCCCCCCHHCCCCEEECC-C----CCEEEEEE-ECC---C-------CHHCCC---------CC---CHHHHHHHHH
T ss_conf 330568999310166468369-9----96799999-447---5-------021047---------75---1999999999
Q ss_pred HHCCCCCCCEEEEEE-CCCC-CCCCHHHHHH---HHHHHHHHHHCCCCEEEEECCHHHHHHHHH
Q ss_conf 751115998179960-3787-7564378999---999999998548924699859354899987
Q 001850 278 TQANVTRDNHIMWTM-GDDF-QYQYAESWFK---QMDKLIHYVNKGGRVNALYSTPSLYTEAKN 336 (1005)
Q Consensus 278 ~~~~~~~t~~il~~~-G~Df-~~~~a~~~~~---~~~~li~~~N~~~~~~i~~sT~~~Yf~~v~ 336 (1005)
.....-....|.+++ |.-| ++.+..+|+. -++.+++.+... ..+++.|+++|++...
T Consensus 199 ~~~~~~~~~lV~i~~DgE~fGhw~~t~~w~~g~~fL~~l~~~l~~~--~~i~~~t~se~L~~~~ 260 (659)
T 1k1x_A 199 SLTSDDPSKVAVFHDDGEKFGVWPGTYEWVYEKGWLREFFDAITSN--EKINLMTYSEYLSKFT 260 (659)
T ss_dssp TTCCSCTTCEEEEEEEGGGTTTSTTHHHHHTTTCHHHHHHHHHHHC--TTEEECCHHHHHHHCC
T ss_pred HHHCCCCCCEEEEEECHHHCCCCCCCCCCCCCHHHHHHHHHHHHHC--CCEEEECHHHHHHHCC
T ss_conf 8635799988999848898198876558617699999999998638--9979986999997589
No 9
>1o7d_B Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 c.6.2.1
Probab=1.00 E-value=1 Score=160.22 Aligned_cols=74 Identities=54% Similarity=0.906 Sum_probs=70.9
Q ss_pred CEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 24699859354899987269999986677744544589730136512311245798764699999998786189
Q 001850 320 RVNALYSTPSLYTEAKNAANGPWPLKTDDYFPYADRRNAYWTGFFTSRPALKGYVRVLSGFYLASRQLEFLAGK 393 (1005)
Q Consensus 320 ~~~i~~sT~~~Yf~~v~~~~~~~p~~~gDf~py~~~~~~ywtG~yTSr~~~K~~~R~~e~~L~~ae~l~~l~~~ 393 (1005)
+++++||||+|||+++++.+..||+++||||||+|+.++||||||||||.+|+++|+++++|++||+|.++++.
T Consensus 2 ~v~v~ysT~s~Yf~al~~~~~~~p~~~~DFfpYad~~~~yWtGyyTSRp~lK~~~R~~~~~L~~ae~L~~la~~ 75 (84)
T 1o7d_B 2 RVNVLYSTPACYLWELNKANLSWSVKKDDFFPYADGPYMFWTGYFSSRPALKRYERLSYNFLQVCNQLEALAGP 75 (84)
T ss_dssp CEEEEECCHHHHHHHHHHTCCCBCEECSCCCSCCSBTTBCSCGGGTSCHHHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred EEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 37899679999999999747888655877003567999750454207799999999979999999999998744
No 10
>3p0b_A TT1467 protein; glycoside hydrolase GH57, glycogen branching, transferase; 1.35A {Thermus thermophilus} PDB: 1ufa_A
Probab=1.00 E-value=1 Score=94.99 Aligned_cols=290 Identities=14% Similarity=0.108 Sum_probs=165.0
Q ss_pred HHHCCHHHHHHHHHHHHCCCEEEECEEEEEECCCCC-CHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCH------
Q ss_conf 950490799999999974986999111212124688-9688999999899999988099983015428898875------
Q 001850 106 WVGQSPEIQEQVRKLVDASQLEFVNGGWCMHDEATT-HYVDMIDQTTLGHHYIKQHFNKTPKAGWQIDPFGHSA------ 178 (1005)
Q Consensus 106 w~~~~p~~~~~vk~lV~~GrlE~v~Ggwv~~Dea~~-~~esiI~ql~~G~~~l~~~fG~~p~vgW~iD~FGhs~------ 178 (1005)
|+...++..+.+|+|++.|++|++++++.-+-..+. ..|++..|+..|.+..+++||.+|+..|.+.. +++.
T Consensus 137 ~~~~~~dii~~fr~L~~~G~iEiit~~~tH~~lPLl~~~e~~~~QI~~g~~~~~~~FG~~P~G~WlpE~-ay~~~~~~~~ 215 (540)
T 3p0b_A 137 FQRLSGDLVAAFRKAEEGGQVELITSNATHGYSPLLGYDEALWAQIKTGVSTYRRHFAKDPTGFWLPEM-AYRPKGPWKP 215 (540)
T ss_dssp HHHTTTCHHHHHHHHHHHTSEEEEEECTTCBCGGGCSCHHHHHHHHHHHHHHHHHHHSSCCCBEECGGG-CBCCSEEECC
T ss_pred HHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCC-CEECCCCCCC
T ss_conf 998667899999999987998997477355687647998999999999999999980999998989422-1307655555
Q ss_pred -----------HHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCEE---EEECCCC---------CCCCCCEEEEEC--
Q ss_conf -----------668998642299379983037777875310687036---9953899---------999870367626--
Q 001850 179 -----------VQAYLLGVELGFDSVHFARIDYQDRAKRKEDKSLEV---IWRGSKT---------FGSSSQIFTNAF-- 233 (1005)
Q Consensus 179 -----------~~p~ll~~~~G~~~~~~~Ri~~~~k~~~~~~~~~eF---~W~~~~~---------~~~~s~i~th~~-- 233 (1005)
.+..+|+ ++||+++++---.-. .......+ ...+..+ .+++-.||.--.
T Consensus 216 ~~~~~~~~~~~~l~~~L~-~~Gi~y~~vd~~~~~-----~~~~~p~yG~~~~~p~~~~~~py~v~~~~~~i~vf~RD~~l 289 (540)
T 3p0b_A 216 PVEGPPEGVRPGVDELLM-RAGIRYTFVDAHLVQ-----GGEPLSPYGEAALGPVESQEATYHVHELESGLRVLARNPET 289 (540)
T ss_dssp SSSCSCCEEECCHHHHHH-HTTCCEEEECTHHHH-----CSSCCCC--------CCCCGGGGSEEECTTSCEEEEBCHHH
T ss_pred CCCCCCCCCHHHHHHHHH-HCCCEEEEECCHHHC-----CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEECCHHH
T ss_conf 543333331312999999-859949998845541-----68888887765666433444530102589866999678777
Q ss_pred -------CCCC------C------CCCCCCCCCCCC-CCCCCCCCCCCCCC-------HHHHHHHHHHHHHHHCCCCCCC
Q ss_conf -------8998------8------999978556799-99866798887555-------8999999999999751115998
Q 001850 234 -------PVHY------S------PPSGFHFELTDD-FDPVQDNPLLDGYN-------VEQWVNDFIDAALTQANVTRDN 286 (1005)
Q Consensus 234 -------~~~Y------~------~p~~f~fd~~~~-~~p~~~~~~~~~~n-------~~~~~~~~~~~~~~~~~~~~t~ 286 (1005)
..+| - ...||.|-+..+ ..|..+ . .-|+ +++.|+.|+...+++......+
T Consensus 290 S~~VWS~~~GYPGd~~YReF~rd~~~tGfky~rit~~~~~l~~-K--~pYdp~~A~~~~~~hA~~Fv~~l~~~~~~~~~~ 366 (540)
T 3p0b_A 290 TLQVWSADYGYPGEGLYREFHRKDPLSGLHHWRVTHRKADLAE-K--APYDPEAAFAKTEEHARHFVGLLERLAGRHPEG 366 (540)
T ss_dssp HHHHHCTTTSGGGSTTSBCSSCCCTTTCCCCBBCCSTTCCGGG-C--CBCCHHHHHHHHHHHHHHHHHHHHHHHHHSTTC
T ss_pred HHHCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCC-C--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 7643455468999805765401244566024136776577545-6--778999999999999999999999999745899
Q ss_pred EEEEEECC---CCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEE
Q ss_conf 17996037---877564378999999999998548924699859354899987269999986677744544589730136
Q 001850 287 HIMWTMGD---DFQYQYAESWFKQMDKLIHYVNKGGRVNALYSTPSLYTEAKNAANGPWPLKTDDYFPYADRRNAYWTGF 363 (1005)
Q Consensus 287 ~il~~~G~---Df~~~~a~~~~~~~~~li~~~N~~~~~~i~~sT~~~Yf~~v~~~~~~~p~~~gDf~py~~~~~~ywtG~ 363 (1005)
.|.+++-. .+.+..+ + .-++.+++.+.+ ...+++.|+++|++....... ++. +=+- ..+.++.|.|-
T Consensus 367 lvv~~~D~ElfGHww~eG-~--~fL~~l~r~l~~--~~~i~~~T~se~L~~~~~~~~-~~~--sSWg--~~g~~~~Wlg~ 436 (540)
T 3p0b_A 367 VILSPYDAELFGHWWYEG-V--AWLEAVLRLLAQ--NPKVRPVTAREAVQGPAVRTA-LPE--GSWG--RGGDHRVWLNE 436 (540)
T ss_dssp EEEEEEEGGGBTTTBTTH-H--HHHHHHHHHHTT--CSSEEECCHHHHTCSCEEECC-CCS--BCSS--GGGSSTTTSSG
T ss_pred EEEEEECHHHCCCCCCHH-H--HHHHHHHHHHHH--CCCEEEECHHHHHHHCCCCCC-CCC--CCCC--CCCCCCCCCCC
T ss_conf 899985524414684577-9--999999998731--698499779999975898788-799--7788--99983736897
Q ss_pred EECCCCHHHHHHHHHHHHHHHHHHHHHH-CCCCCCCCHHHHHHHHHHHCCCCCC----CCCCCCC
Q ss_conf 5123112457987646999999987861-8999997227999998743245677----8987410
Q 001850 364 FTSRPALKGYVRVLSGFYLASRQLEFLA-GKKSPGPTTSALGDALGIAQHHDAV----TGTAKQH 423 (1005)
Q Consensus 364 yTSr~~~K~~~R~~e~~L~~ae~l~~l~-~~~~~~~~~~~lw~~l~~~QhHDaI----tGTs~~~ 423 (1005)
-.. +.-..+-.+.+.+..++ ........++.+++.|++.|-=|-- +||..+.
T Consensus 437 ~~~--------w~~~~l~~a~~~m~~~~~~~~~~~r~l~Qa~RELLlAesSDW~f~~~~~t~~~Y 493 (540)
T 3p0b_A 437 KTL--------DYWEKVYRAEGAMREAARRGVLPEGVLRQAMRELLLLEASDWPFLMETGQAEAY 493 (540)
T ss_dssp GGH--------HHHHHHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHTBTHHHHTTTCTTTHHH
T ss_pred HHH--------HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHH
T ss_conf 799--------999999999999999862265539999999999999984813877269984688
Done!